LOCUS       DASYRV010000001         2102 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2284575, whole genome shotgun sequence.
ACCESSION   DASYRV010000001 DASYRV010000000
VERSION     DASYRV010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2102
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2284575"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1727)
                     /locus_tag="VGQ24_00005"
     CDS             complement(<1..1727)
                     /locus_tag="VGQ24_00005"
                     /inference="COORDINATES: protein motif:HMM:NF019350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEV8453244.1"
                     /translation="MSSGPWSARFLSRLRHAAVPTGTQRIERQLAAARFLLAVSSLAA
                     VYLSPGPSPAVAYILLPVYVIHSLLVLTLLRFRAHSTPGFRFMVHVVDLVWIALITLF
                     TEGPNSPFFSLFVFVLLAAAYRWGLQETLATAAAAILLFVVQAELATDGPAYIGYFLK
                     ARLPLDLVIPRSAYLFVIALPLGWLAEEEKQLRAETAAIVRVTTRIQAATGLSASMQA
                     VCDELLRLFDARQALVVAEQLSNGQLFLWDARRLAGVEKTTLRVSELDSSAQPNYFFQ
                     APGHTWYTRQRRFPARKRAPKLLALDDDGRQISGATCAYPAGFLEAHPFRSLLGILFT
                     FPDQLSGRIFVFDPRFGSRVPGELRFAQALTRQVSPAVYSAYLVRRLRSRAGAIERAR
                     VARELHDGVIQSLIGVEMQVDVLRRQADHDPAQITGDLTRIQQILRQEVLAVRELMQE
                     MRPPDLGPEHLLEFLSDLVHKFGRESGIGARFISELEEVTLSPRVCRELARIVQEGLA
                     NVRKHSGAGRVLVRLGALDGTCNLVIDDNGRGFDFEGRRSLAELDSSRKGPAVLKERV
                     RAIGGNLMI"
BASE COUNT          413 a          673 c          692 g          324 t
ORIGIN      
        1 tctatcatga gattgccgcc gatcgcacgg acgcgctcct tgaggacggc cggacccttg
       61 cgcgagctgt ccagctcggc cagtgagcgg cggccttcga aatcgaagcc gcgcccgttg
      121 tcgtcgatca ccagattaca ggtcccatcc agcgcgccga gccttaccag caccctgccc
      181 gccccgctgt gcttgcgcac gttggccagt ccctcctgga cgatgcgcgc cagctcccga
      241 caaacgcgcg gcgacagagt gacctcctcc agctcggaga tgaatctggc cccgataccc
      301 gattcgcgcc cgaacttgtg gaccaggtcg gacaggaact cgagcagatg ctcgggaccc
      361 aggtcgggcg gccgcatctc ctgcatcagc tcgcggaccg cgagaacttc ctggcgcagg
      421 atctgctgga tgcgggtgag atcccccgtg atctgagcgg gatcgtggtc ggcctggcgg
      481 cgcagcacgt ctacctgcat ctccaccccg atcagagact ggatgacgcc gtcatgaagc
      541 tcccgcgcga cccgggcgcg ctcgatcgct ccagcccggg aacgcaggcg ccgtacgagg
      601 taggcgctgt acacggccgg gctcacctgg cgagtcagcg cctgggcaaa ccgcaattcc
      661 ccgggcacgc gcgatccgaa gcgcgggtcg aacacgaaga tccggccgga caactggtca
      721 ggaaaggtga acaggatgcc caggagcgag cgaaagggat gagcctcgag aaagccggcc
      781 ggataggcgc aggtcgctcc gctgatctgc ctcccgtcgt cgtccagggc caggagcttg
      841 ggcgcccttt tgcgcgccgg gaagcgccgc tggcgcgtgt accaggtgtg acccggagct
      901 tggaagaaat agttgggctg tgcggaggag tccagctcgg agacccggag agtcgttttc
      961 tccactccgg cgagccggcg ggcatcccaa agaaagagct ggccgttgct gagctgctcc
     1021 gcaaccacca gggcttgcct ggcgtcaaag agccgcagca actcgtcgca cacggcctgc
     1081 atgctcgcgc tcagcccggt cgccgcctgt atcctcgtcg tgacccggac tatggccgcg
     1141 gtctcggccc ggagctgttt ctcttcttcc gccagccacc ccaggggcaa cgcgatcacg
     1201 aacaggtacg ccgaccgggg aataaccaga tcgagcggca acctcgcctt gaggaagtat
     1261 ccgatatatg ccgggccgtc ggttgccagc tccgcctgga cgacgaagag cagaatcgcc
     1321 gccgctgccg tggccagcgt ttcctgcaaa ccccatcgat acgctgcggc gaggagaacg
     1381 aacacgaaca acgagaagaa ggggctgttg ggaccttcgg tgaacagggt gatgagggcg
     1441 atccagacga ggtcgaccac gtgcaccatg aaacgaaatc ccggggtcga gtgcgcccgg
     1501 aagcgcagca gcgtaaggac gaggaggctg tggatgacgt agaccggaag gagaatgtag
     1561 gctaccgcgg gagacgggcc cgggctgagg tagactgccg ccagggagga tacggccagg
     1621 aggaatcggg cggcggcgag ttgccgctcg attctttggg tcccggtcgg gaccgccgca
     1681 tggcgaagac gggacaggaa cctagctgac caggggccac tggacacaac accacctcta
     1741 agggacgccc caaaccgccc ttcccggctg gggccgccaa taagggagag tcccatcata
     1801 gcactaatcc gcagcgtaag gtctatcgaa gtggggcact ctgggcactc gtggcctgac
     1861 ccgtccttga cgcctcacgc cgcctctggt actccattct catccccaat gcccaaagag
     1921 ggcggcaaac cagctcgcgg gagattgtcc ccgtcgagac catcgagcgt cggatcttgt
     1981 ttgatccgaa ggatatgaag cgtcacaagt gggcggacat caagctcgcg cgaagccgga
     2041 gacgcgagct cggattgagg ctgaagctcg tcgtgaattg gtgctggcgg cgcgccttgc
     2101 ag
//
LOCUS       DASYRV010000002         2008 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_772, whole genome shotgun sequence.
ACCESSION   DASYRV010000002 DASYRV010000000
VERSION     DASYRV010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_772"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..199)
                     /locus_tag="VGQ24_00010"
     CDS             complement(<1..199)
                     /locus_tag="VGQ24_00010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453245.1"
                     /translation="MRQQRVTCPFEPARRLIEPILCGLLLLLGSVPAQASEEPAFPPE
                     VQAKLNAALTQTMTENAIPGCV"
     gene            complement(211..1773)
                     /locus_tag="VGQ24_00015"
     CDS             complement(211..1773)
                     /locus_tag="VGQ24_00015"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEV8453246.1"
                     /translation="MMNTGGWRRAAALLFLIGLTVQAGPASEVTLEKVNAALPELEKL
                     VQQTMDKTGVPGMAIGVVYRDQVVYLKGFGVREAGTAAAVDPDTVFQLASVSKPIAST
                     VLAALVGEGVIGWDDRVIDRDPDFRLFDPWVTREVTIRDLLCHRTGLPGQAADQLEDL
                     GYSREEILYRLRFLRPATSLRSYYDYNNLTYTEAGVAGARAAGKSWEELSVEKLYRPL
                     GMTSTSSRFADYQAAPNHALLHVNIDGKWIAKYTRHPDAESPAGGVSSTVRDMVQWLR
                     LQLGNGKFNGQQLIAAEALAETHRPQMVNRAPANPATDQAGLYGLGWGVAYDGGGRVR
                     WSHSGAFDLGAATQVHLLPAEELGIVILTNAAPIGVPEGISASFFDLVLDGKVQRDWL
                     GGYGQIFASFKEYDGRGTDYSQPPAQKSAPLPADAYAGIYHNDFFGDIEVVAKEGGLV
                     LTAGPSKTPFPLQHWDRDLFLYQPVGEFAGGLSGVAFRVGPDQKAASVVVENLDIYSR
                     GQGTFTRVPAGN"
BASE COUNT          326 a          696 c          630 g          356 t
ORIGIN      
        1 cgacgcaccc cgggatcgca ttctcggtca tcgtctgggt aagcgcggca ttcagcttcg
       61 cctgcacctc ggggggaaag gccggctctt cgctcgcctg cgccggcacg gaacccagca
      121 gcaggagaag tccgcagagg atcggctcga tgagtcgacg cgccggttcg aaggggcaag
      181 ttactcgttg ctgtcgcatg agggttcctc tcaattgccg gccggcacgc gggtgaacgt
      241 gccctggcca cggctgtaga tgtcgagatt ttcgaccacg acgctcgccg ccttctgatc
      301 gggtcccacc cggaacgcga ccccgctcaa cccgccggca aactcgccca ccggctggta
      361 gaggaacagg tcgcggtccc agtgctgcag cggaaacggc gtcttgctcg gtcccgcggt
      421 cagcaccagc ccaccctcct tcgcgaccac ctcgatgtcg ccgaagaaat cgttgtgata
      481 gatgcccgca taggcgtcgg cgggcagggg cgctgacttc tgcgcgggcg gctgggagta
      541 gtccgtccct cggccgtcat actccttgaa gctcgcgaag atctgtccgt agcctccaag
      601 ccagtcccgc tggaccttgc catcgagcac caggtcgaag aagctcgcgc tgatcccctc
      661 gggcacaccg atgggcgccg cgttcgtgag gatcacgatg cccagctctt ccgccggcag
      721 cagatgcacc tgagtcgccg cgccgagatc gaaggcgccg gagtggctcc aacgcacccg
      781 acctccgccg tcgtaggcca caccccagcc caggccgtac aggcccgcct gatccgtcgc
      841 cgggttcgcg ggggcgcggt tgaccatctg gggccgatgg gtctccgcca gcgcctcggc
      901 cgcgatgagc tgttggccgt tgaacttccc gttgcccagc tgcaagcgca gccactgcac
      961 catgtcccgc accgtggagc tcactccgcc cgccggagac tcggcatcgg gatggcgtgt
     1021 gtacttggcg atccacttcc catcgatgtt gacgtgcaac agggcgtggt tcggagccgc
     1081 ctggtagtct gcgaaccgcg agctcgtcga ggtcatcccg aggggacggt agagcttctc
     1141 gacggagagc tcctcccacg atttccctgc cgcccgcgcg cccgcgaccc ccgcttcggt
     1201 gtaggtcagg ttgttgtagt cgtagtagga gcggagactg gtcgccggcc tcaggaagcg
     1261 gagccggtag aggatctcct cacggctgta gcccaggtct tccagctggt cggccgcctg
     1321 tcccggcagg cccgtgcggt gacagagcag atcgcggatc gtgacctccc gcgtcaccca
     1381 cggatcaaag aggcggaagt ccgggtcacg gtcgatcacc cggtcgtccc agccgatcac
     1441 gccctcgccg accagagccg ccagcaccgt ggaggcgatc ggcttggaca ccgaggcgag
     1501 ctggaacacg gtatccggat ccaccgccgc tgccgtgccg gcctcccgaa cgccgaagcc
     1561 tttgagatag accacctgat cccggtagac gacaccgatc gccataccgg ggacgcccgt
     1621 cttgtccatg gtctgctgga cgagcttctc cagctcgggg agggcggcgt tgactttctc
     1681 aagcgtgact tccgacgccg gtcccgcctg gaccgtcagg ccgatcagga agagcagcgc
     1741 cgcggcacgg cgccagccac cggtgttcat catctgtttc ctccgaaccc aacacgcaca
     1801 cgtccacatc cttctgtccg cactctaccg cgtcaccgtt gattccccgt tcattgcgtg
     1861 ttgattgggt gttgatctta cgtttcggcg ttggctcttc agattccgcg tcgaaggaag
     1921 cgttcgcctc gaccccgagg agaagatctg cgcggccggc cagatcggcg cgttcgttcg
     1981 ggaactgctc tccgtgaacg cagcctca
//
LOCUS       DASYRV010000003         2298 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1870054, whole genome shotgun sequence.
ACCESSION   DASYRV010000003 DASYRV010000000
VERSION     DASYRV010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2298
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1870054"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..358)
                     /gene="rpsK"
                     /locus_tag="VGQ24_00020"
     CDS             complement(<1..358)
                     /gene="rpsK"
                     /locus_tag="VGQ24_00020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEV8453247.1"
                     /translation="MTTPAQPTPPSEPSASASATGPAVPAAAGVPTKAPGPKRSKKVV
                     ESEGIAHISATFNNVLITITDMRGNTIAWGTAGKAGFKGSKKSTPFAATVAAENVGRE
                     VMNLGVRKLHVLVQGPG"
     gene            complement(362..742)
                     /gene="rpsM"
                     /locus_tag="VGQ24_00025"
     CDS             complement(362..742)
                     /gene="rpsM"
                     /locus_tag="VGQ24_00025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009125149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEV8453248.1"
                     /translation="MARIAGVDLPREKRVEVALTYIYGIGRPTSNRLLADSGIGPDTR
                     VRDLSDAEVARLRQLIERSVKVEGALRTEIAMNIKRLMDIGTYRGSRHRKGLPVRGQR
                     THTNARTKKGPRRAIAGKKKATKK"
     gene            complement(745..861)
                     /gene="rpmJ"
                     /locus_tag="VGQ24_00030"
     CDS             complement(745..861)
                     /gene="rpmJ"
                     /locus_tag="VGQ24_00030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020322760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEV8453249.1"
                     /translation="MKVRSSVKPICEHCKVVKRQGVIRVICKRNPKHKQRQG"
     gene            complement(981..2126)
                     /locus_tag="VGQ24_00035"
     CDS             complement(981..2126)
                     /locus_tag="VGQ24_00035"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HEV8453250.1"
                     /translation="MTPPPTKGLETGRRILVVDDHEHNRVLLQEILEQQGYQVELAAD
                     GTAALRVIAECEPDLVLLDVNMPGMDGFEVCRCLRAEAQTAALPVILVTALADREQRL
                     EGIAAGANDYLTKPIDRPDLLLRVKNALRMRGLHRQVESQYHELRRLEQLRDSLVHML
                     VHDLRTPLTGIRGYLELARMRVEELSLPEVLEDFAEMERSIVELTDMVSDVLDVSRFE
                     AEAMPLSLAATDLRSLAEEAVLVVGHSRHATVELFAPAAPVLVVADPAVIKRVITNLV
                     GNAVKFSPREAVVRVELEANEAGAQVRVVDQGCGIPSEYHERIFDKFGQVAGNGNVPI
                     RSSGLGLAYCKLAIQAHGGHIGVVSEEGKGSRFWFMLPPAGTPVLPA"
BASE COUNT          389 a          736 c          738 g          435 t
ORIGIN      
        1 tcccgggacc ctgaaccagc acatgcaact tgcgcacgcc caggttcatc acttcacggc
       61 ccacgttctc cgccgccacc gtagctgcaa acggggtgct cttcttggag cccttgaacc
      121 ccgctttgcc agcggtgccc cacgcgatgg tattacctcg catatcggtg atcgtgatca
      181 gcacgttgtt gaacgttgcc gagatgtggg cgatgccctc ggactcgacg acctttttgg
      241 accgcttggg accgggggcc ttggtcggga cccccgctgc cgccgggacg gcggggcccg
      301 tggcggaggc ggaagccgaa ggctcggacg gaggggtggg ctgggctgga gtcgtcatag
      361 gttacttctt cgtcgccttc tttttgcccg cgatggcgcg gcgcggcccc ttcttggtgc
      421 gcgcgttggt atgcgtgcgt tggccgcgga ccggcaggcc ctttcggtgg cgcgagcccc
      481 ggtaggtccc gatgtccatc agccgcttga tgttcatggc gatctcggtg cggagcgcgc
      541 cttcaacttt gacgctgcgc tcgatcagct gacgcagccg cgctacttca gcgtccgaga
      601 ggtcgcggac cctggtatcg ggcccgatgc cggaatccgc gagcagccga ttgctggtcg
      661 gccggccgat tccgtagatg taggtgagtg ccacttcgac ccgcttttcc cgcggaaggt
      721 ccactcctgc tatacgcgcc atcgttaacc ctgccgctgt ttgtgcttcg gattacgctt
      781 gcaaatgacg cgaatgacgc cttgccgctt gaccactttg cagtgctcgc agatcggctt
      841 gacactcgac cgtaccttca caccactccc cttgaattag gttgccgggc agcttggcaa
      901 tatagagagc aggcccagag gacacaaggg ccggagggga aacgagttag gggccgtggc
      961 tgacggcggg agcggcggcc ttaggccggg agaaccggcg tgccagccgg gggaagcatg
     1021 aaccagaatc ggctgccttt cccttcctcg ctaacgaccc cgatgtgtcc tccatgagcc
     1081 tgaatggcaa gcttgcagta ggccaagcct aggccgctcg agcggatcgg gacgttgcca
     1141 ttgccagcaa cctggccgaa cttgtcgaag atccgctcgt gatactcgga ggggatcccg
     1201 caaccctggt ccaccacgcg cacctgggca cccgcctcat tcgcttcgag ctccacgcgg
     1261 acgacggcct cccggggtga gaacttcacc gcattgccga cgagattggt gatcacgcgc
     1321 ttgatgaccg ccgggtcggc cacgaccagg accggggccg ccggcgcaaa cagctccacg
     1381 gtggcatggc gcgaatgtcc taccaccaat acggcctctt ccgccagcga ccgcaggtcg
     1441 gtcgcagcga gagaaagcgg cattgcctcc gcttcgaagc ggctcacatc gagcacgtcg
     1501 ctcaccatgt cggtgagctc cacgatactg cgttccattt ctgcaaagtc ctcgagcacc
     1561 tcaggcagag acagctcttc caccctcatc cgggccagct cgagatagcc ccggattccg
     1621 gtgagggggg tccggaggtc gtgcaccagc atgtgcacca ggctgtcgcg gagctgctcg
     1681 agccgacgga gctcgtggta ttgcgactcc acctggcggt gcagaccacg cattcgcagg
     1741 gcattcttga cccgcaacag gaggtccggt cggtcgatcg gtttggtgag gtaatcgttc
     1801 gcgccggcgg caatgccctc gaggcgctgc tcccggtcgg cgagggcggt taccaggatg
     1861 acaggcaaag ccgccgtttg ggcctcggct cgtaggcagc ggcaaacctc gaacccatcc
     1921 atccccggca tgttcacatc gaggaggacg agatccggtt cgcactcggc gatgacgcga
     1981 agcgccgccg ttccatctgc ggccagctcg acctgatagc cctgctgctc cagaatctct
     2041 tgcaagagca cgcgattgtg ctcgtgatcg tccaccacga ggatccgcct gcctgtttcg
     2101 agtcctttgg tgggcggcgg cgtcatacgg gtcgccgcgg ctcggagagc aggcgggcca
     2161 cggttccagc cagagtgcga gtttgaatcg gcttggtgat gtacgcgtcg aaaccggaat
     2221 cgcgcgcgag ctgttcatct cccgacatgg cgtaggcagt cagggcgatg accggaatag
     2281 agcgggtact cgcatcgg
//
LOCUS       DASYRV010000004         6357 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_417879, whole genome shotgun sequence.
ACCESSION   DASYRV010000004 DASYRV010000000
VERSION     DASYRV010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6357
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417879"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..377
                     /locus_tag="VGQ24_00040"
     CDS             <1..377
                     /locus_tag="VGQ24_00040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453251.1"
                     /translation="YKVRYFNWYKYNEAAWPAPLHLQLNPDVTVRARGVMEKCTFCIQ
                     RIRGAQNDARLEDRQIRDGEFTTACAQACPSNAIVFGNAADPGSRVAQLQQDPRGYRV
                     LEDLNTRSAITYLAKVQLPAEA"
     gene            381..1739
                     /gene="nrfD"
                     /locus_tag="VGQ24_00045"
     CDS             381..1739
                     /gene="nrfD"
                     /locus_tag="VGQ24_00045"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HEV8453252.1"
                     /translation="MAVATHPVVRDGHTMTQSHGDITRDIVATLGPATRGYVLLLFGA
                     VSLLLVGILTFLILVKDGLGHAGYNPPVFWSVYITTFVFWIGIGHAGTLISAILFLFR
                     SPWRTAVYRSTEAMTVFAVMTAGLFPIIHIGRQWIFYWLLPYPNQRFLWPNFKSPLLW
                     DVFAISTYLTVSTTFLVFGLLPDVAAVRDKVAGWRKTIYSLTSVGWRGTNNQWRHYSR
                     AYLYLAALATPLVLSVHSVVSWDFAVSLVPGWHGTIFAPYFVAGAIYSGIGMVLTLII
                     PLRRAFRIEHLITDYHFDNLAKLTLLTGSILLYAYAMEYFVGWYSGNIFEQTTFYRRA
                     FGPMWWAGWTMIICNAFVSQLLWFRKIRVNITALFVISIFINIGMWFERFVIIVSSLS
                     NDYIPWAWAQLNPTWADWGILAGSFGWFGMWFLLFAKNFPIVAIQELKEMIPMPRKRG
                     GH"
     gene            1739..2266
                     /locus_tag="VGQ24_00050"
     CDS             1739..2266
                     /locus_tag="VGQ24_00050"
                     /inference="COORDINATES: protein motif:HMM:NF023249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3341 domain-containing protein"
                     /protein_id="HEV8453253.1"
                     /translation="MALLKRRPVRVPGLLASFLHVDAAADAIRAIRALGIRDLTVYTP
                     SPNHEIEEALGQRVSPVRLFTLIGGLSGCAAGFAMTIWMSYDWPVLIGGKPIASIPPY
                     VVIGFELTILLGALSTVAAVGLFSVLMGKPGAAYDPRFSDDQIGIFVPAPSDQAGRVE
                     QLLRSAGAVEVRHEA"
     gene            2256..2936
                     /locus_tag="VGQ24_00055"
     CDS             2256..2936
                     /locus_tag="VGQ24_00055"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEV8453254.1"
                     /translation="MRRNALLALLLLGSGACDFYYYRLPSPDDLWHVIPWFDHMIHAR
                     YVRPYETQQGPRYSPEGSVPVSGGELDWSAEWISGKTTTANALKSPFAIGAAAAHPSG
                     PSAPAIPRELEAAGDTLYQNFCSVCHGPTGNADGTVSRQIGAPALLTARARAYSDGYI
                     YSIIRYGRGVMPRYGDKVYAPAERWAIVHHVRKLQAQGPAPAPAPGAAAPIPPGPSAT
                     GSTATVPR"
     gene            2933..4294
                     /locus_tag="VGQ24_00060"
     CDS             2933..4294
                     /locus_tag="VGQ24_00060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453255.1"
                     /translation="MSPTLRERLIQRAVAARYDLFLGVGAGLTILGLILFVQSLAGSA
                     ADRAWQLFHVNWLYFNGLATGSVAFAAVQKITNAKWSGLIIRFAEAGVAFLPVSLIGL
                     VLIFTAGYHSIYGPMEAALHELQHSKAVWLSHDFMFARLGVGLLALAIVGWKLVKADL
                     VPDMYATRAAVAGGRRALFERWSQGYQPTSSAAIEHELRIRRLGPLYAVIYVYVLTLV
                     AFDGIMALQPHWFSNLLGGFIFMGAFLGAHMLLALLMIYGSAHLGISGLVSPKQRHDL
                     GKLCFGFSVFWTYLMWAQFLVIWYGNMPEETGFVFARLWGHWLPVAKAVFTGMFLVPF
                     FGLLGVAPKKSRVTLGFFASVSLTALWLERYLLVMPSITALPGPTFGLPEVGPTLAFV
                     GLFLLSYGLFGRTFPMLSPRLAEITLDHERVHAVTSAEFEHEEGPRDYVSPELLERRS
                     RPR"
     gene            complement(4449..5438)
                     /locus_tag="VGQ24_00065"
     CDS             complement(4449..5438)
                     /locus_tag="VGQ24_00065"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HEV8453256.1"
                     /translation="MRHIPDDELHAYLDQGLSRSQCVEIESHLAACPSCQAARDGIAA
                     LRDRTTALLAKLAPPRAFPAEFESLRRRAANQVSARRRRAHIATWAASLVAAVGVGWT
                     ASFLLRPHEPVARPVAGQVVTLPVSTRPAAPAVRRPARRDTTRIQPSRRRPAAKAVAT
                     KSATALPPVIPPPALELSSIDIPRSDVGFELDGMWRTMSWAGAQAEAGDKLPHIDGLP
                     VVQVQVQTSGQGNQPLMVVAQQLASGEVIRTIEGPTSDVSHLLARRAMSDPIPTTSQR
                     DSAPRDSVPSDTDHTDRTMAMQRGDRMLVITGALPSDSLLAMIRRLNAEMRSK"
     gene            complement(5422..5940)
                     /locus_tag="VGQ24_00070"
     CDS             complement(5422..5940)
                     /locus_tag="VGQ24_00070"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEV8453257.1"
                     /translation="MTDELEQLYQTTYTAVVRFLYRKVWDAERAEDLAQEVFVRALTH
                     RPEKPRAWLFAVAANLARDEARAAVRRRRHLILLKADPVAQPTVGPTADSLVEHDERV
                     ASVQQALSTLTPRDREILLLWDAGLSYPEIAAQTGLALGAVGTTLARARRRLVDAHDR
                     QHTIEGNHAAHS"
     gene            complement(6039..>6357)
                     /locus_tag="VGQ24_00075"
     CDS             complement(6039..>6357)
                     /locus_tag="VGQ24_00075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453258.1"
                     /translation="RGAACCRDLQIEIMCTKRQRRLEALVRSRRSPYLCKVERAGDFS
                     IEAEIISACAYLDDDGIGCTLHGRQRPDGRPAKPDLCSEWPEKKQGLHPGCVFSRRGM
                     RLG"
BASE COUNT          988 a         2094 c         2044 g         1231 t
ORIGIN      
        1 cctacaaggt gcgctacttc aactggtaca agtacaacga ggctgcctgg ccggcaccac
       61 tccacctgca gctgaacccc gatgtgacgg tccgggcccg cggcgtaatg gagaagtgca
      121 ccttctgcat ccagcggatc cggggggcgc agaacgacgc ccggctggag gaccggcaga
      181 tccgcgacgg cgagttcacc accgcgtgtg ctcaggcctg cccatcgaat gcgattgtgt
      241 tcggcaatgc cgcggatccc ggcagcaggg tggctcagct ccagcaggac ccccgcggct
      301 accgggtgct cgaggacctc aatacgcggt cggcgatcac ctacctggcc aaagtccagc
      361 tcccggcgga ggcgtaaccg atggctgtcg ccacccatcc ggtcgttcgc gacggccata
      421 ctatgaccca gagccacggg gacatcaccc gcgacattgt cgcgacgttg gggcccgcga
      481 ctcgcggata tgtgctcctg ctgttcggag cggtctcgct cctcttagtc gggattctca
      541 ccttcctcat cctggtgaag gacgggctcg ggcacgcggg gtacaaccct ccggtgttct
      601 ggagcgtata catcaccacc ttcgtcttct ggatcggtat cggtcacgcc ggcacgctga
      661 tctcggccat cctgttcctg ttccgttctc cgtggcgcac cgccgtgtat cgatccaccg
      721 aggcgatgac tgtattcgcg gtcatgaccg ccggcctctt cccgatcatt cacatcgggc
      781 ggcaatggat cttctattgg ttgctgccct atcccaacca gcggtttctc tggcccaact
      841 ttaagtcgcc gctgctctgg gacgtgttcg ccatctccac ctacctcacg gtgtcgacca
      901 ccttcctggt cttcggactg ctgcctgacg tggcggcggt gcgagacaag gtggccggct
      961 ggcggaagac gatctactcc ctgacctcgg tcggctggcg gggcaccaac aaccagtggc
     1021 ggcactactc ccgggcgtac ctctacctgg cggcgctcgc cacgccgctg gttctctcgg
     1081 tccactcggt ggtgtcctgg gacttcgccg tgagccttgt gccgggctgg cacgggacga
     1141 tcttcgcgcc gtacttcgtc gccggcgcca tctactccgg aatcgggatg gtgctcaccc
     1201 tgatcattcc gctccggcgg gcgttcagga tcgagcacct gatcaccgac taccatttcg
     1261 acaaccttgc gaagctgaca ctcctgaccg gctcgatcct gctctacgcc tatgcgatgg
     1321 aatacttcgt cggctggtac agtggaaaca tcttcgagca gaccacgttc taccggcgcg
     1381 ccttcggccc catgtggtgg gctggctgga cgatgatcat ctgcaacgcg ttcgtctccc
     1441 agttgctctg gttccgcaag atcagggtca acatcaccgc gctgttcgtg atttcgatct
     1501 tcatcaacat cgggatgtgg ttcgagcgat tcgtcatcat cgtgtcatcg ttgagcaacg
     1561 actacatccc ctgggcctgg gcccagctca acccgacctg ggctgattgg gggatcctgg
     1621 ccggatcgtt cggctggttc ggcatgtggt tcctcctgtt cgccaagaac tttccgatcg
     1681 tggccatcca ggagctcaag gagatgattc cgatgccgcg gaagcgggga ggccactgat
     1741 ggcgctgctc aagcggcggc cggttcgcgt gccggggctc ctcgcgtcgt tcctgcacgt
     1801 ggatgcggcg gcggacgcca tccgtgccat ccgggcgctg gggatccgcg atctgaccgt
     1861 gtataccccc tctcccaacc acgagatcga ggaggcgctg ggccagcggg tgagtcccgt
     1921 gcggctcttc accctgatcg gcggcttgag cggctgcgcc gccggcttcg ccatgaccat
     1981 ctggatgtcc tacgattggc cggtactcat cggcggaaag ccgatcgcgt cgatcccccc
     2041 ctacgtggtc atcggattcg agctgaccat tctgctcggc gcgctcagca ccgtggcggc
     2101 ggtggggttg ttctcggtgc tcatgggcaa gccgggggcg gcctacgatc cgcggttcag
     2161 cgatgaccag atcggcatct tcgtgccggc gccctccgat caggctgggc gggtggagca
     2221 gctgctccgg tccgctggtg cggtggaggt gcgccatgag gcgtaacgca ctcctcgccc
     2281 tgttgttgct cggctcgggg gcttgcgact tctactacta ccgcctgccg tcaccggacg
     2341 acctctggca tgtgatccca tggttcgatc acatgatcca cgcgcgttac gttcgcccct
     2401 atgaaacgca gcaggggccg cggtattcgc ccgagggaag cgtcccggtg agcggcggcg
     2461 agctcgattg gtcggccgag tggatctcgg gcaagaccac aacggccaat gcgctgaaga
     2521 gcccgttcgc catcggtgca gcggcggcgc acccgtctgg tccgagcgct ccggcgatac
     2581 cgcgggagct cgaagcggcc ggcgacaccc tgtatcagaa tttctgtagc gtctgccatg
     2641 gccccaccgg caacgccgac ggcaccgtgt cccggcagat cggcgctccc gctctgctga
     2701 ctgcccgagc gcgagcctat agcgacggct acatctacag catcattcgt tacggtcgcg
     2761 gcgtaatgcc gcgctacggc gacaaggtgt acgctccggc ggagcgttgg gccatcgtcc
     2821 accatgtccg caagctgcag gcccaggggc ccgcgccggc gccagctccg ggggccgctg
     2881 ctcccattcc gccggggccc agcgccacgg gttctaccgc cacggtacca cgatgagccc
     2941 cacgctgcgt gagcgattga tccagcgggc ggtggccgca cgctacgacc tgttcctcgg
     3001 agtgggcgcg ggcctcacga ttcttggcct gatcctcttc gtccagtcat tggccgggag
     3061 cgcggccgat cgggcctggc agctctttca cgtcaactgg ctttacttca acggcctggc
     3121 caccgggagc gtggcctttg ccgcggtaca gaagatcacc aacgccaagt ggtcgggatt
     3181 gatcatccgg ttcgccgagg cgggggtggc gttcctgccg gtgtcgctga tcggcctggt
     3241 gttgatcttc acggcgggct accactcgat ctacggtccg atggaagccg cgttgcacga
     3301 attgcagcac tcgaaagcgg tatggctgtc ccacgacttc atgttcgccc ggctcggagt
     3361 gggattgctc gcactcgcca ttgtgggctg gaagctggtc aaggccgacc tggtgcccga
     3421 catgtacgcc acccgggccg cggtcgccgg tggccgacgc gccctcttcg agcgctggtc
     3481 acaggggtac cagccaacct cctcggcggc gatcgagcac gagttgcgta tccgccgttt
     3541 gggccccctg tacgcagtga tctatgtgta cgtgctcacc ctggtggcgt tcgacgggat
     3601 catggcgctt cagccgcact ggttctccaa tctgcttggc ggcttcatct tcatgggagc
     3661 gtttctcggc gctcacatgc tgctggcgct gctgatgatc tacggatccg cccacctggg
     3721 gatctcgggt ctggtctcac ccaagcagcg ccacgatctg ggcaagctct gcttcgggtt
     3781 cagcgtcttc tggacctacc tgatgtgggc gcagttcctg gtgatctggt acggcaatat
     3841 gccggaagag accggattcg tgttcgcacg cctctggggg cactggctcc cggtggccaa
     3901 ggccgtcttc accggcatgt ttctcgttcc cttcttcggt ctcctcgggg tagctcccaa
     3961 gaagtcgcga gttacactag ggttcttcgc gagcgtgagc ctcacggcac tctggctcga
     4021 gcggtacctg ttggtcatgc catcgatcac cgcgctgcca ggcccgacgt tcgggctacc
     4081 cgaggtcggc ccgactctgg cgtttgtggg gctgttcctg ctctcctatg ggttgttcgg
     4141 ccgcaccttc cccatgctct ctccccggct ggccgagatc acgctcgatc atgagcgggt
     4201 gcacgccgtt acttcagcgg aattcgagca cgaggagggg ccgagggact acgtgtcgcc
     4261 agagctgctg gagcggagga gcaggcctcg ataatcacaa aagcgtcagc gggactagga
     4321 cgaacgtaag cggtaagcgg gaactcacca aacgagagac cctccctgtt tcggcacaag
     4381 gagggttttt gcttcaggga gcgacccgct caccgctcac gcttgtcctg tcccgcttac
     4441 gcctttgtct acttgctccg catctccgca ttcaacctgc gaatcatcgc gagcaggctg
     4501 tccgaaggca gcgcgccggt gatcacgagc atccgatcgc cgcgttgcat ggccatggtg
     4561 cggtcggtgt gatcggtgtc gctggggacc gaatcgcgcg gagcggaatc gcgctggctt
     4621 gtggtcggta tcggatccga cattgcccga cgggccagga ggtgtgagac gtcgctggtc
     4681 gggccttcga tcgtgcgaat gacctcgccc gatgcgagct gttgggccac caccatcaac
     4741 ggctggttac cctgcccgct cgtttggacc tgaacctgaa ctaccggcag tccgtcgatg
     4801 tggggcagct tgtctccggc ttcagcctgc gcacccgccc acgacatggt gcgccacatg
     4861 ccgtccagct cgaatcccac atcagagcgc ggaatgtcga tcgaggagag ctccagtgcc
     4921 ggtggcggaa tgactggagg aagcgcggtc gccgatttgg tggcaacggc cttggcggcc
     4981 ggccggcgtc tcgatggctg aatcctggtc gtgtcccggc gggcgggacg gcggacggcg
     5041 ggcgccgcag ggcgggtcga aaccggcagc gtcacgactt gtccagccac agggcgggcg
     5101 acaggctcat gcggtcgaag gaggaagctg gccgtccagc ccacgcccac ggcggccacc
     5161 aggctggcgg cccaagtggc tatatgggcc cgccgacggc gggcggaaac ctggttggcg
     5221 gcacggcggc gcagcgactc gaattcggca ggaaaggccc gcggcggggc gagcttggcc
     5281 aggagcgccg tagtccggtc ccgcagcgcc gcgatgccgt ccctggctgc ctgacacgag
     5341 gggcaggcgg ccagatgact ctcgatctcc acgcactgtg accggctcag gccctggtcg
     5401 agataggcgt gcagctcgtc gtcaggaatg tgccgcatgg ttcccttcga tggtgtgctg
     5461 ccggtcatgc gcgtcgacca ggcggcgcct ggcccgggca agcgtcgtac ctacggcgcc
     5521 aagagccaag ccggtttggg ccgcgatctc ggggtagctg aggccggcgt cccacaaaag
     5581 cagaatctcc cggtcccgcg gggtcagcgt gctcagggct tgctgtaccg aggctacccg
     5641 ctcgtcatgt tccaccagag aatcggccgt cggccctacc gtcggttgcg caaccgggtc
     5701 ggccttcagg aggatgaggt gccgcctgcg ccggacagcc gcgcgggcct cgtccctcgc
     5761 aagattggcc gccaccgcaa acagccatgc tctaggtttc tcgggccggt gggtcagggc
     5821 cctcacgaac acctcctgag ccaggtcctc ggcacgctcc gcgtcccata ccttgcggta
     5881 gagaaaacgc acgaccgccg tgtaggtggt ctggtaaagc tgttcgagct cgtccgtcac
     5941 tcgctctcct cagagcccgc aggtacgccg gagctatccg gctaggtcgt ccaagaggac
     6001 ggcccacttc caggaacttg cacagccgtg tttttcgctc aacccaggcg catgccgcgc
     6061 cgggagaaga cgcagccggg atgcagccct tgcttcttct ccggccactc gctgcagagg
     6121 tccggcttgg ctggtcggcc atcggggcgt tgccgcccat gcagagtgca gccgatcccg
     6181 tcatcatcga gataggcgca ggcggagatg atctctgcct cgatggagaa atcccccgcc
     6241 cgttccacct tgcagagata cggtgagcgg cgagaacgca ccagggcctc cagcctgcgt
     6301 tgccgcttgg tacacatgat ctcgatctgg aggtcgcggc agcacgccgc cccgcgg
//
LOCUS       DASYRV010000005         3407 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2493712, whole genome shotgun sequence.
ACCESSION   DASYRV010000005 DASYRV010000000
VERSION     DASYRV010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3407
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2493712"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..560)
                     /locus_tag="VGQ24_00080"
     CDS             complement(<1..560)
                     /locus_tag="VGQ24_00080"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEV8453259.1"
                     /translation="MLDLKDKLAHALAGRYIVEREIGRGGMATVYLAQDLKHHRPVAV
                     KILHPHIASHLGTDRFLREIQIAARLSHPHILTLIDSGEADGLLYYIMPFVQGESLRD
                     RMTRGRLPLEEALQIARHVASALGYAHTQGVVHRDIKPENVMLHEGEAMVTDFGIAKA
                     VSAAGSENLTQTGSTVGTPAYMSPEQA"
     gene            complement(614..802)
                     /gene="rpsU"
                     /locus_tag="VGQ24_00085"
     CDS             complement(614..802)
                     /gene="rpsU"
                     /locus_tag="VGQ24_00085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005805980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEV8453260.1"
                     /translation="MIEVTIGEGDRLDGALKAFKKKVIKAGILKDLRAKRHYLKPSEA
                     RKLKSAAARRRKRKAARF"
     gene            complement(937..1149)
                     /locus_tag="VGQ24_00090"
     CDS             complement(937..1149)
                     /locus_tag="VGQ24_00090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEV8453261.1"
                     /translation="MRTTGTVKWFNDAKGFGFITPENGEKDCFVHHSAIQDKGFRSLA
                     EGEKVEFTIVQGQKGPAAENVVKIAK"
     gene            complement(1399..2904)
                     /gene="dacB"
                     /locus_tag="VGQ24_00095"
     CDS             complement(1399..2904)
                     /gene="dacB"
                     /locus_tag="VGQ24_00095"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HEV8453262.1"
                     /translation="MKLGRASIVLLLAASASPVGAVPRPAAKEGRTVQAQLEAWYRGA
                     SRAAPGKWAIAVATLDGQLIWGVEPTRPMIPASTVKLFTTGFARSIVGSDARRLTRVM
                     GSGHVDSASGTWIGTWALELNGDPTLERPTRGGPSLRELAVQLYRTGIRRLIGPFNVV
                     SSAGQASASYPEVWSPRHKGRLFAPLIGALTLNENLLSFAIAPGKAAGKAPTLVAESP
                     AGVGELVEIRARTVVGRRSRLHYARGEGGRYLVTGTIGTRARIRWFTTTAPDPRALLE
                     ASWARALRDAGVEWIRASGISAPVAATAPFVLAQVSSEPFDSIASEVNRRSLNIGAEL
                     MLLWAAGDDRPAEQLTAHVQQITGEQSGIRLVDGSGLSHEDRVTPLAFISYLARFPLS
                     PAGRGFSQLLPSNGVGTLRKLARGLPGPGVVRAKTGTLGDVATVTGYLGRPEGVLLIS
                     LMYNGPRVWSAKQQQWKLFRLLGAEGVTIPDDSVAIATQLGGEEPVRRPEP"
     gene            complement(2901..>3407)
                     /locus_tag="VGQ24_00100"
     CDS             complement(2901..>3407)
                     /locus_tag="VGQ24_00100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEV8453263.1"
                     /translation="LILERCRVPEANVLGPVGLGYKISIETLNEGRIGIGAQMIGIAQ
                     GALDAALAYVKERKQFGKAVAEFQGVQFQLAQMRTEVEAARLMVYNAARLKDGDRPFT
                     TEAAMAKLFSSQVADRTTSMCVELFGGYGYSKEYPAEKYYRDAKIGTIYEGTSNMQLL
                     TIAKSLLK"
BASE COUNT          583 a         1103 c         1092 g          629 t
ORIGIN      
        1 gcctgttccg ggctcatgta ggccggcgtg ccgacggtgg agccggtctg ggtgaggttt
       61 tcgctcccgg ccgcgctcac cgctttggcg atgccgaaat cggtgaccat cgcctcgcct
      121 tcgtgcaaca tgacgttctc aggcttgatg tcgcgatgca ccacgccttg ggtgtgggca
      181 tatcccagcg cgctcgcgac gtgccgggcg atctgcagcg cctcctccag cggaagccgc
      241 ccgcgagtca tccggtcccg cagcgattct ccctgtacga acggcatgat gtagtagagc
      301 aagccgtccg cttcgccgga gtcgatcagg gtgaggatgt ggggatgact gagccgcgcc
      361 gcgatctgga tctcgcggag aaaccgatcg gtgccgagat gtgatgcgat gtggggatgc
      421 aggattttga ctgcgaccgg gcgatggtgc ttgagatcct gggcgaggta taccgtcgcc
      481 atgccgccgc ggccgatttc acgctcgacg atgtagcgcc cggcgagggc gtgggccagt
      541 ttgtccttca gatcgagcat cggcgaggga ctttcagcgg attgcggaaa ctaccggcct
      601 cgccgggatt ctgctagaag cgggcggctt tccgcttgcg ccgccgagcc gccgcggact
      661 tgagcttccg ggcttcgctt ggcttgaggt aatgccgctt ggcgcggaga tccttcagga
      721 tcccggcctt gatgaccttt ttcttgaacg ccttgagtgc gccgtcgagc cggtcgccct
      781 cgccgatcgt cacttcgatc atgcagtctc tcctccgtaa aggacggacg gtggggacag
      841 tgggacggtg aggactgaac taccgtccga ctgcccgcac cgtccccacc gtcctaccga
      901 aaacaacaag cggccccgaa aggccgcccg tttggcttac ttggcgatct tgacgacgtt
      961 ctccgccgcc gggcccttct ggccctggac gatggtgaat tccaccttct cgccttcggc
     1021 gagcgaacgg aatcccttgt cctgaatcgc cgagtgatgg acgaagcagt ccttctcgcc
     1081 gttctccggg gtgataaaac caaacccctt ggcatcattg aaccacttca ccgtaccggt
     1141 cgtacgcatt tcctactcct gttgtatttg taatcggagt gccggaaacg gtactgaccg
     1201 actacatgtg aagcgcgatc tttcccctcg cgcggggggc ttcaccaaac cccggactat
     1261 ccgtgggagt ggccgaacga acgaaggggg tcgcaatgag agcgaccccc catgcaatcg
     1321 ttcccgaagc ctactcaaaa caccaatgag cgtctgagca agcaccaaac tagtacaaag
     1381 ttgcctgaat ttcaagcctt acggttccgg gcgcctcacc ggttcctcgc cgcccagctg
     1441 ggtggcgatg gcgacgctgt catcgggaat ggtgacgcct tcggcgccga gcagccggaa
     1501 cagcttccac tgctgttgct tggcggacca gacgcgcggg ccgttgtaca tgagagagat
     1561 caacagcacg ccttccggcc tgcccagata gccggtgacc gtggccacgt ctcccagcgt
     1621 cccggtcttc gcgcggacga ctcccggccc gggcagtcct cgcgccagct tgcggagcgt
     1681 gccgacgccg ttgctgggca agagctgcga gaagccgcga ccagcgggcg agagcgggaa
     1741 gcgggcgaga taggagatga acgcgagggg cgtcacgcgg tcttcgtgtg agaggccgct
     1801 gccgtcgacc aggcggatgc cgctctgctc accggtgatc tgctgcacgt gcgcggtcag
     1861 ctgctcggcg ggacggtcat ctcccgcagc ccagagcagc atcagctcgg ccccgatgtt
     1921 gaggctgcgc cggttgacct cgctcgcgat cgaatcgaac ggctcggagc tgacctgcgc
     1981 cagcacaaag ggggcggtcg ctgccacagg ggcggagatg ccgctggccc ggatccactc
     2041 gactccggcg tcccgcagcg cacgggccca gctcgcctcg agcagggccc gcggatcggg
     2101 cgcggtggtg gtgaaccacc tgatgcgcgc gcgcgtgccg atcgtaccgg tcacgaggta
     2161 acggccgccc tcccctcgcg cgtagtgcaa ccgggacctg cgtcctacca ccgtacgggc
     2221 acgaatctcg acgagctccc cgaccccggc gggtgattcc gccacgagcg tgggagcctt
     2281 gcccgccgcc ttccccgggg cgattgcaaa actcagcagg ttttcgttga gggtgagggc
     2341 tccgatcagc ggagcaaaga ggcggccctt gtggcgcggg ctccagacct caggatatga
     2401 cgcactggcc tgaccggcgg agctcaccac gttgaaaggg ccgatcagtc tgcggatacc
     2461 ggtacgatag agctgtacgg caagctcgcg tagactgggt cccccgcgcg tcggacgctc
     2521 cagcgtagga tctccgttca gctcgagcgc ccaggtgccg atccaggtgc ccgaggcgga
     2581 atcgacgtgg ccgctgccca tgacacgggt gagtcggcgc gcatcgctgc ccacgatgct
     2641 gcgggcaaag ccggtggtga agagcttcac agtggaggcg ggaatcatgg ggcgggtagg
     2701 ttccacaccc cagatgagct gcccgtcgag cgtcgccacc gcgatggccc atttgccagg
     2761 agccgctcgc gatgcacccc tgtaccaggc ctccaactgc gcctgaacgg tgcggccttc
     2821 cttggcggcc ggacgcggaa ccgccccgac cggcgaggcg ctcgcggcca gcagcaagac
     2881 gatggaggcg cgtccgagct tcatttcagc agcgatttgg caattgtcag cagttgcatg
     2941 ttgctagtgc cctcataaat cgtgccaatc ttcgcatccc ggtagtattt ctcggcggga
     3001 tactccttcg aatagccata gccgccaaag agctctacgc acatggaggt ggtccgatcg
     3061 gccacctggg agctgaagag cttggccatg gccgcctccg ttgtgaacgg ccggtctcca
     3121 tcctttagac gagcggcgtt gtagaccatt agacgcgcgg cttccacctc tgtccgcatt
     3181 tgagccagct gaaattggac cccctgaaac tcggccacgg ccttgccgaa ttgtttgcgc
     3241 tccttgacgt atgccagcgc cgcatcgagc gcgccctggg cgatgccgat catctgcgcg
     3301 ccgatcccga ttcttccctc gttcagggtc tctatggaga tcttgtagcc gagcccaacc
     3361 ggtccaagca cgttcgcctc ggggaccctg cagcgttcca ggatcag
//
LOCUS       DASYRV010000006         8061 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_210077, whole genome shotgun sequence.
ACCESSION   DASYRV010000006 DASYRV010000000
VERSION     DASYRV010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8061
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_210077"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1256
                     /locus_tag="VGQ24_00105"
     CDS             <1..1256
                     /locus_tag="VGQ24_00105"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEV8453264.1"
                     /translation="LFYPAIVPNTPKKTLVTSLLAASTEPLALLISHLRGVQVHLSTF
                     YLLWDFLPTYICAFLVVLPVKIIHNLGQQVKRARELGSYRLEEQLGRGGMGEVYRATH
                     QMLARPAAVKLIRSEILGSSSPGAARVIMERFRREAEAAASLRSPHTINLYDFGVSHD
                     GTFFLVMEMLDGLDLETLVERFGPVPPERAVYLLRQVCESLEEAHTRGLIHRDIKPSN
                     VFTCRMGLAVDFVKVLDFGLVKAMGEQGREATLLTAPDSTTGTPAYIAPEMVRGDGAV
                     DHRVDIYTLGCVGYWLLTGQLVFQAPNAIQLMYQHANATPIPPSQRSELEISPELDSV
                     ILACLAKLPQDRPQSAGELSRRLAATVNGDGWTEDQAHRWWDRHHPECAQQPCECEKR
                     MLTKTMEGAWSPVETPIPELDTART"
     gene            1288..2742
                     /locus_tag="VGQ24_00110"
     CDS             1288..2742
                     /locus_tag="VGQ24_00110"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEV8453265.1"
                     /translation="MTVTNERLSAAAERAGPLDRVLRPFTEVRAGEGATALLLALNVF
                     LLLASYYFIKPVREALILSGEGAEVKSYAAAGQAVLLLGLVPAYGLLADRLPRRGLLN
                     AVTAFFVACLLGFYALTHAGVQVGVPFFLWVGIFNLMIVAQFWSFANDIYTKEQGERL
                     FAIVAFGASLGAVLASMFASRLIPLIGVPQLLLVAAGLLVLGTAVSNLIDGRERARHE
                     THLPLHLTTAEIPAATGEYQVQMVEDAKKLTVSLPGTGPVTRKGTFRLVFQDRYLLLV
                     AFLALVLNWVNSTGEYILGRTVEGAAQAAVTAGTARGLSVSEYIGEFYSQFFFAVNLV
                     GLTVQLFVVSRLLKYFGVRLAVMVLPLIALFGYAILAFVPILALVRVVKIAENATDYS
                     VQNTVRNVLFLPTSRDQKYKAKQAIDSFFVRAGDVLSALLVFVGTTALGLHATGFARV
                     NLVLAAVWALIALAIGREYARKSKTLPQSTANIL"
     gene            2829..3890
                     /locus_tag="VGQ24_00115"
     CDS             2829..3890
                     /locus_tag="VGQ24_00115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453266.1"
                     /translation="MPALPPDFIETSLYLIGDAGAPDTLREPVLQALRRELGSRGGRS
                     VVVFLGDNAYPRGLPAPGQPGRRDAEFNLTAQVETITSSGAGGFFVPGNHDWAKHSAE
                     GWAAIQRQAAFIDSAGRGVVSLHPHGGCPGPDVVDLGKRIRLVMLDTQWWLHHAPKPQ
                     DPTSSCPADKEEEIVDSLRAALAGASGRLVVVAAHHLLVSGGEHGGHFNWRDHLFPLR
                     LVVPWLWIPLPWLGSLYPAARQEGISSQDVPSRAYQRMIAAFRRAFAPVSPALYASGH
                     DHNLQVIRAGPARLNLISGAGIYGHTTEVSRIQGTLFARDASGYARLDVPQLGRSRLS
                     IVQVDPSGRGHEVFSMWVD"
     gene            4369..6915
                     /locus_tag="VGQ24_00120"
     CDS             4369..6915
                     /locus_tag="VGQ24_00120"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEV8453267.1"
                     /translation="MRLAQRITLSIVTLLSGTGLAAQSRPSHADTLQAPGPQYRASGL
                     HSLLLGREYRSLWTTPISVPVLDLRTFAGGLRPVSKGGGQETKTLRLVAPDGREYFFR
                     SVDKDPSAALPPELRGTVAGSVVRDQTSSAFPTAPLVVTKLLTAAGILHTEPRLFVLP
                     HSGLGEFEADFGGLMGFLEEGIGGRTAPLRHWGAATEIIPSDSLFARVQRSPDDRVDA
                     RALLTARLFDVLIGDWDRHGDQWRWARFGNTLPRHWVPIPLDRDQAFVKYDGLLLTVA
                     RQSAPQLTNFGPKYPYIPGATWNGRDLDRRFLSELEWPVWESVVGSLRAALTDTVIDD
                     AVRALPPQHYALKGAALAAALRARRDRLPEAAERYYRQLGKQVEVHATDAGDRARLSR
                     EPGGEVELTLRSDSAGGELYFRRRFDPEVTREVRLFLDGGDDAAVVSGQRRGGPLLRI
                     VGGEGHDSLVDSTRSGGERFYDDPDGPARVQASGAKVDRRPYVAPRKSPKDLPSRDWG
                     SRWTASTQLSYGPDIGFFLGGGRTLTVYGFRKDPYASRHRFRAGFATGPKTYRVDYRG
                     ELRRENSASYAEVLLRASGVDVISFRGFGNEIAAPGDNEFYRITQDAFGLHPSLVFGL
                     GRRTTLQIGPTLKYTSTDRRPGRFLDTLDTLYGSGNFGELGGGLTFRHDSRDRPTAAT
                     RGVLLEIGGNVYPAIWDVDSTFGEVHGEAATYLTARAPLDPTLAFRVGGKKLWGHYPF
                     FESAFIGGASTVRLGKVNRYAGDAAAYGSAELRLSLTRLTLVLPATFGVFGLADVGRV
                     FLAGESSDRWHGAAGGGIWLSYLDRAYTFSLALASGEERTGIYAQAGFGF"
     gene            6916..>8061
                     /locus_tag="VGQ24_00125"
     CDS             6916..>8061
                     /locus_tag="VGQ24_00125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453268.1"
                     /translation="MSLAGLRSTADRRAAAAAAAASTVIIAFQLAGKSTRDALFLSTF
                     GVAALPPMVIAAAMLSMVLIIGLARVMGRMRPARLVPRLFLLSALLLMAEWMLAAQAR
                     QAAAILVYLHLTGLGALLVSGFWAMVNERFDPSTARRTIGQITAGGSLGGLLGGILPE
                     RVGAVLPLTAMLPILAGLQLLAAGLVLGVEHGAPPESTTPEPIQSNESPLSAARILRN
                     SSYLMGLALLVAFTSTAEGVLDYVFKARATVTVTSGEELLRFFAAFYTTTALLGIFIQ
                     VSLLRRLLGGVGVARSVALLPAGVSAGVVGAFFIPGLASVVVARGVEVVIRSSLFRAA
                     YELLFTPIAPQEKRATKLLLDVGAARVGDVAGGALILGALAVTGAAAG"
BASE COUNT         1250 a         2682 c         2581 g         1548 t
ORIGIN      
        1 tcttgttcta tccggcgatc gtaccgaaca cgccgaagaa gactctggtc acctcgctgc
       61 tggccgcctc gaccgagccg cttgcccttc tcatcagtca tctccgcggg gttcaggttc
      121 atctcagcac cttctacctg ctctgggatt tcctgcccac ctacatctgt gccttcctgg
      181 tggtgctgcc ggtaaagatc attcacaacc tgggacagca ggtgaagcgt gcccgtgagc
      241 tgggcagcta tcgactggaa gagcaactgg gtagaggcgg catgggcgag gtgtaccggg
      301 ccacccatca aatgctggcc cgtcccgccg cagtgaagct gatccggtcg gagatcctcg
      361 gctccagcag ccccggcgcg gccagggtta tcatggagcg cttccgccgg gaggcggagg
      421 cggccgcatc gctccgctca ccccacacta tcaacctcta tgatttcggc gtctcccacg
      481 atgggacgtt cttcctggtg atggagatgc tggatggact cgatctggag actctggtcg
      541 aacggttcgg gccggtgccg ccagagcgcg cggtgtattt gctgcggcag gtttgcgagt
      601 cgctggagga agcccacacg cgtggactga ttcatcgcga catcaagcca tcgaacgtct
      661 ttacctgccg catggggctc gcggtggact tcgtcaaggt gcttgacttt gggctggtaa
      721 aggcgatggg cgaacagggg cgggaggcga ccctgctgac cgcgcccgac agcaccacgg
      781 gaacgccggc gtacatcgca cccgagatgg tacgaggtga cggagcggtg gatcaccggg
      841 tggacatcta cacgctggga tgcgtgggct attggctgct gaccggccag ctggttttcc
      901 aggcaccgaa cgcgattcag ctaatgtacc aacatgccaa cgctaccccc ataccgcctt
      961 cgcagcgcag tgaactggag atctcacccg agctggacag cgttatcctc gcctgtctgg
     1021 ccaaactgcc tcaagaccgt cctcagtcgg cgggggagct ctcccgccga ttggccgcta
     1081 ctgtcaacgg cgacggctgg accgaggacc aggcccaccg ctggtgggac cgccaccatc
     1141 ccgaatgcgc ccagcagccc tgcgagtgcg aaaagcggat gctgaccaag accatggaag
     1201 gcgcctggtc gccggtggag accccgatac ccgagctcga tacggctcgc acgtgatgca
     1261 ttacgccgct ggctgacgga gtcttttgtg accgtaacca acgagcggct ttcagccgcg
     1321 gccgagcggg ccgggcctct cgaccgtgtg ctccggccct ttaccgaggt tcgggcggga
     1381 gaaggggcca ccgcgctgct cctcgccctg aacgtgttcc tcctgctcgc ctcctactac
     1441 ttcatcaagc cggtccggga ggccctgatt ctctcgggcg agggcgccga ggtgaaatct
     1501 tatgccgcgg cgggccaggc ggttctgctc ctcggactgg tgccggcata cggtctactg
     1561 gcggaccggc tgccccggcg ggggctgttg aatgcggtga ctgccttctt cgtcgcctgt
     1621 ctgctcgggt tctacgccct tacccatgcc ggcgtgcagg tgggcgtgcc gttcttcctc
     1681 tgggtcggca tcttcaactt gatgatcgtg gcccagttct ggtccttcgc caacgacatt
     1741 tacaccaagg agcaaggcga gcggctcttc gccatcgtgg cgttcggcgc atctctgggg
     1801 gcggtgctgg ccagcatgtt cgccagccgg ctcatccccc tcatcggtgt tccccaatta
     1861 ctcctggtag cggccgggct cctggtcctg ggcaccgcgg tcagcaatct gatcgacggg
     1921 cgcgagcgag cacggcatga gacgcatttg cccctgcatc tcaccaccgc cgagattccg
     1981 gcggccactg gtgaatacca ggttcagatg gtcgaggacg cgaagaagct gaccgtctcc
     2041 ttacccggca cggggccggt cacccgcaaa gggaccttcc ggctggtgtt ccaagatcga
     2101 tacctcctgc tggtggcttt cctggcgttg gtcctcaact gggtgaacag caccggcgaa
     2161 tacatcctgg gccgcacggt cgagggagcg gcccaagccg cagtcacggc ggggacggcg
     2221 aggggactat cggtctccga atatattggc gagttttatt cccagttttt cttcgccgtc
     2281 aacttggtgg gtctcaccgt tcagctcttc gtagtgtcgc ggctgctcaa atacttcggg
     2341 gtcaggttag cggttatggt ccttcctttg atcgcgctct tcgggtacgc gatccttgcg
     2401 ttcgtgccca tcttggccct cgtccgagtg gtcaagattg cggaaaacgc cacggactac
     2461 tcggttcaga atacggtgcg caacgtgctc tttctcccca ccagccggga ccagaagtac
     2521 aaggcaaaac aggcgatcga ttcattcttc gtgcgggccg gggatgtctt atcggcgctg
     2581 ctcgtcttcg taggtaccac ggccttggga ctgcacgcga ccggcttcgc tcgggtcaac
     2641 ctggtgcttg ccgccgtatg ggctctgatt gctctcgcga tcggtcgcga gtacgcgcgg
     2701 aaatcgaaga ccctgccgca gagcaccgca aacatcctgt gagccgcagg ttctgcgggt
     2761 ggtgctggcc aggcctgctg gttggacttg gagcctgtgc cgccaccgcc cagccctcca
     2821 tttcgccggt gccggcactc cctccggatt ttatcgagac gagcctgtat ttgatcggcg
     2881 atgccggtgc ccctgatacc cttcgtgagc cggtgctcca ggcccttcgc cgggagcttg
     2941 gctcccgcgg agggcgaagc gtcgtggtct tcctgggcga taacgcctac ccccggggcc
     3001 tcccagcacc tggtcaacct gggcggcggg atgccgagtt caacctgacg gcgcaggtag
     3061 agacgatcac gtcatcgggt gccggcggct tcttcgtgcc cggcaaccac gactgggcca
     3121 agcattcggc tgagggctgg gcggcgatcc agcgccaggc ggcgttcata gattcggcgg
     3181 gccggggcgt ggtctccctg cacccgcatg gtggatgtcc cggaccggat gtggtagatc
     3241 tggggaaacg gattcgactg gtcatgctcg acacccagtg gtggttacat catgccccca
     3301 agccgcagga tcccacctcc agctgtcccg ccgataaaga ggaagagatc gtggactcgc
     3361 tacgagccgc cctcgccggg gcctcggggc gtctggtggt ggtcgcagca caccacctcc
     3421 tggtttcagg cggggagcat ggcggacatt tcaactggcg ggaccacctc tttccgcttc
     3481 ggttagtggt tccgtggctc tggatccccc ttccctggct gggatccctc tatcccgcgg
     3541 cgcgtcagga gggcatctcc agccaggacg ttccctcgcg cgcgtaccaa cgcatgattg
     3601 ccgcgtttcg ccgggcattc gcgccagtct cacccgccct gtacgcgtcg ggacacgacc
     3661 acaatctgca agtcatcaga gctggtccgg cacggctcaa tctcattagt ggcgcaggga
     3721 tctacgggca taccaccgag gtgagtcgca ttcagggtac gctcttcgcc cgggatgcca
     3781 gcggctacgc ccggcttgac gtgccccagc taggccggtc tcggttgtca atcgtgcagg
     3841 tagacccatc tgggcggggg cacgaagtct tttcgatgtg ggtggactga agcgcggcga
     3901 tcaaaccact cgcgctcgtc ttccggcacg tcgttccatc cgttgtaatc gcagctcaac
     3961 acaaccacct cacttgccgc tggtcggacc aggcgcggca cctcttgagg gatcgcccga
     4021 gtttggggcg tgacgagtgc gatccattcc cgagcgggga gtctttgaat tcctcaaacg
     4081 gctaaggccc tagaggagag actccccaat ttggggagca gtgaggcccc attgttagag
     4141 ttcctagcag ctcgactctg gccactaccc acgtagcccg gaagactaat gttggcaagt
     4201 tgccggcaga ggctggttgg cgattggaca gtgctgctcc ccaattcagg agtcgctctc
     4261 cacactacac cggctatctt ccgactccag ctccgatcgc caaaattgtc cttctacacc
     4321 agccagcgag cctggctctt ctttcgactt ctctggagtc ggtatctcgt gagactcgcg
     4381 cagcggatta cactgagcat tgtcacgctg ctgtcgggca ccggactcgc ggctcagagt
     4441 cggcccagcc atgctgacac tctccaggct ccagggccgc aataccgagc cagcggattg
     4501 cacagcctgt tgctcggaag agagtatcgt tcgctgtgga ccacgccgat ctccgtgccg
     4561 gtgctcgatc tccgcacctt cgccggcgga ctgcggccgg tgtccaaggg tggcgggcag
     4621 gagaccaaaa ctctccggct cgtggcacct gatggccgag agtatttctt ccgctcggtg
     4681 gacaaggatc cctccgccgc gctgcctcct gagcttcgtg gcacggtggc aggcagcgtg
     4741 gtgcgggacc agaccagctc cgcctttccg accgcgccgc tcgtcgttac gaaactgctc
     4801 accgcggccg gcatcctcca cacggagccc cgcctgtttg ttctcccgca cagcggcctc
     4861 ggcgagttcg aggccgactt cggcgggctc atgggcttcc tcgaggaagg aatcggcggg
     4921 cggaccgccc cgctgagaca ctggggtgcc gccaccgaga tcatccccag cgacagcctg
     4981 tttgcccggg tgcaacggag cccggacgac cgggtggatg cccgcgctct cctcaccgca
     5041 cggctgttcg atgtcctgat cggcgactgg gatcgccacg gcgatcaatg gagatgggcc
     5101 aggttcggca acacgctccc ccgacactgg gtccccatcc cgcttgatcg cgatcaggcc
     5161 tttgtgaaat acgacggcct gctcctgacc gtcgcccgcc aatccgcacc ccaactgacc
     5221 aacttcggcc ccaagtatcc ctacatcccg ggcgccacct ggaacggacg cgacctcgat
     5281 cgccgattcc tcagcgagct cgagtggccc gtgtgggaat cggtggtcgg gtcgctccgc
     5341 gcggcactca ccgacaccgt gatcgatgat gcggtgcggg cgctgccgcc gcagcactat
     5401 gcgttgaagg gcgctgcgct cgccgctgcc ctccgtgctc gtcgcgaccg cctgcccgaa
     5461 gcggccgaac gctactatcg tcagctgggc aaacaggtgg aggttcacgc caccgatgcc
     5521 ggcgatcgcg cgcgactcag ccgcgagccg ggaggagaag ttgagctgac gctgcgcagc
     5581 gactctgcgg gaggcgagct ctatttccgc cggcggttcg acccggaggt aaccagagag
     5641 gtgcggctgt ttctcgatgg cggagacgat gccgcggtag tgagcggtca gcggcgcggc
     5701 ggccctctgc tccggattgt gggaggcgag ggccacgata gtctggtgga ctccacccgc
     5761 tccggcggcg agcgtttcta cgacgacccc gacggaccag cgcgggtcca ggcttcgggc
     5821 gccaaggtcg atcgccgtcc ctatgtcgcg ccccgcaaga gtcccaagga cctgccctcg
     5881 cgcgattggg ggagccgctg gaccgcgagc actcagctga gctacggacc ggatatcggg
     5941 ttcttcctcg gtggcggccg cacgcttacg gtctacggct tccggaagga tccctacgcc
     6001 agccgccacc gcttccgcgc cggcttcgcc accgggccca agacgtaccg ggtggactat
     6061 cgtggcgagc tccggcggga gaactccgcc agctacgccg aggttctgct tcgcgcgtca
     6121 ggggtggacg tgatcagctt ccgcggcttc ggcaacgaga tcgccgcacc cggtgacaac
     6181 gagttctacc ggataaccca ggacgcattc ggcctccatc cgtcgctcgt gttcggtctc
     6241 ggcagacgaa ccacccttca gatcggaccc acactcaaat acacatccac cgaccggcgt
     6301 ccgggtcgct tcctcgacac cctcgacacc ctgtacggaa gcggcaattt cggcgagctc
     6361 ggcggcggcc tcacgttccg ccatgacagc cgggaccggc cgaccgccgc cacgcgaggg
     6421 gttctgctgg agatcggcgg taacgtgtac cccgccatct gggacgtgga cagcaccttc
     6481 ggcgaggtgc acggcgaagc cgcgacctac ctgaccgccc gcgccccgct ggacccaacg
     6541 ctggcgttcc gggtcggtgg caagaagctc tggggccatt atccgttctt cgagtccgcc
     6601 ttcatcggtg gcgcatcgac cgtgcggctc gggaaggtga accgctatgc cggggacgcg
     6661 gcggcgtacg gctcggcgga gctgaggctc tcgctcaccc ggctcacgct ggtgcttccc
     6721 gccacgttcg gcgtgttcgg attggcggat gtggggcggg tctttctcgc cggcgagtcg
     6781 tccgatcgct ggcatggcgc ggccgggggc ggcatctggc tgtcgtacct ggaccgggcc
     6841 tatacgtttt ccctcgcgct cgcttccggc gaggagcgaa ccggcattta cgcccaggcc
     6901 ggcttcgggt tctagatgag tctggcaggt ctccgttcca ctgcggatcg acgggccgcc
     6961 gccgccgcgg cagcagccag cacggtcatc atcgctttcc agctcgccgg caaatccacc
     7021 cgggacgcgc tcttcctctc gaccttcggc gtggcagcgc tcccaccgat ggtcatcgcg
     7081 gccgcgatgc tctccatggt tctgatcatc ggtctggccc gggtcatggg gcggatgcgg
     7141 ccggcccggt tggtgccccg gctcttcctg ctgagtgccc tgctcctgat ggcggagtgg
     7201 atgctggcgg cacaggccag gcaggccgcg gccattctgg tttacctcca cctcaccgga
     7261 ctcggcgctc tcctcgtctc cggcttctgg gcgatggtaa acgagcgctt cgatccgagc
     7321 actgccaggc gcaccatcgg ccagatcacg gccggcggct ccctgggcgg tctgctcggc
     7381 gggattctgc cggaacgagt cggcgcggtg cttccgctta ccgcgatgct tcccatcctg
     7441 gccggcctgc agctgctcgc agcgggactc gtcctgggcg tcgaacacgg cgctcccccc
     7501 gagagcacta cccccgagcc gatacagagc aacgagtcgc cgctatccgc ggcccggatt
     7561 ctgcgaaact cgtcttacct gatggggctc gccctgctgg tggccttcac ctccacggcg
     7621 gagggcgtgc tggactatgt attcaaggcg cgggccacgg tgacggtcac cagcggtgag
     7681 gagcttctgc gcttcttcgc ggcgttctac accacgaccg ctttgctggg gatcttcatc
     7741 caggtgagct tgcttcggcg gctgcttggc ggagtcggcg tcgcgcgcag tgtcgcgctg
     7801 ctccccgccg gggtgtccgc cggcgtggtg ggtgccttct tcataccggg gctggcatcg
     7861 gtagttgtgg cgcgtggcgt cgaggtggtc atccggagct cgctgttccg tgccgcctac
     7921 gagctgctct tcacgccgat cgcaccgcag gaaaagcgtg ccaccaaact gttgctcgac
     7981 gtcggcgctg cccgggtggg agacgtggcc ggtggcgccc tcatcctcgg cgccctggcg
     8041 gtgaccggag ctgccgccgg g
//
LOCUS       DASYRV010000007         4069 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2286109, whole genome shotgun sequence.
ACCESSION   DASYRV010000007 DASYRV010000000
VERSION     DASYRV010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4069
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2286109"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1694)
                     /locus_tag="VGQ24_00130"
     CDS             complement(<1..1694)
                     /locus_tag="VGQ24_00130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase"
                     /protein_id="HEV8453269.1"
                     /translation="MPARCSLGILGSLLALGSLYAQAPARPGASSAAPLTDTPELKAL
                     KDLRWRSIGPANQAGRIPMVVGIPGDRSTYYVGAAAGGLFKTSNGGVTFEPLFDDQEN
                     ASIGDLAIAPSNHSILYLGTGEGNPRNSASVGDGVYKSLDGGKSWKKLGLENTEKIPR
                     IRIDPANPEIVFVCALGRTWGPNQERGLFKTTDGGKSWRKILYVDELTGCSDVDIDPG
                     NSNVVWAGMHRHQRWPWYFTSGGGGTGVYLSVDGGESWTRLSGKANGRGLPEGDMDRI
                     GISVHRADPNVVYVVSETKSEGELWRTEDGGKTWQTVNRDPNINFRPFYYSDVRADPA
                     NPNVVYTLSGSLNKSQDGGRTFQRIGGDIHGDHQAMWIDPTDGNYILEGSDGGWQVSY
                     DAGRSWEVVNTVSFAQFYHVNYDMEKPYNLCGGLQDNGHWCGPSRTLSNQGNRKNAWV
                     TVSGGDGFFAVPDLKEPSLVYSASQGGGIVLTDMRTGDQRSIHPYPRRVGSAGDSLAE
                     HKYRFNWNAPIVLDPADSKTVYFGGNVLFRTRNYGQSWEVISPDLSTNDKKKQGSSG"
     gene            complement(1749..2345)
                     /locus_tag="VGQ24_00135"
     CDS             complement(1749..2345)
                     /locus_tag="VGQ24_00135"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEV8453270.1"
                     /translation="MSLVDALRALHAVRRPDDVVISAMGAAREWMALGTQRLDWVFVP
                     SSMGQATSLGLGLALAQPERRVIVLNGDGGMLMNLGSLVTLSAYAPPNLVVLLLDNGV
                     YEITGAQPTPSAPAGRVAGDRIDFATLARASGLTSVFSFDTLDGWRHGLESVLTATGP
                     VFAVLEVAPVPQAKGPRSPGPAPGRARRFMAALSQRGG"
     gene            complement(2351..2836)
                     /locus_tag="VGQ24_00140"
     CDS             complement(2351..2836)
                     /locus_tag="VGQ24_00140"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEV8453271.1"
                     /translation="MFSGEQIAGLLERCGITDVVTVPDSTIGQWETAIEQSGIRLIRV
                     CREGEAWAVAAGLYLGGRRPLVMIQCTGLFESGDALRNVLHDWKLPIPSIIGYRSYLN
                     QDTLPGDTCLSFTEPILRAWAMDYKLITAPEQFAELAEHLQGYATAAAPRAVLLAEGK
                     A"
     gene            complement(2851..>4069)
                     /locus_tag="VGQ24_00145"
     CDS             complement(2851..>4069)
                     /locus_tag="VGQ24_00145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453272.1"
                     /translation="RDGVVFTVIRGNNREIAVLDLKTRAVRVLLAGTMPRYLPTGHLV
                     YLRNDGTLLAVRFDPARRQVTGAPVAVVEGMAVRTYGVGDYVISSQGTLVYSGGGAGG
                     GGVEFLNWVTRDGKPTQVDSSWTSDFITHALSPDGKRLVVSMVSEGPRDLWIKELDRG
                     PLTRFTFEGQTNQRPTWSPDGNSITFISDRSGTSQLYRQPAGGSGTAELLTPKHEQRP
                     IAEGFWSPDGKWLIYRTESSSGGSGDIMGFRPGIDTMPVPLVATRFAETAPGLSPDGK
                     WLAYTSLESNQTDVFVRPFPKVDDGKWQVSVGGGREPVWAHNGHELFYKSNDDQMMVA
                     SLDLERGFGVRDRKQLFSTGDFDNDPEHARYNLSPDDQRFIMSRRGTGSGGEIVLVLH
                     WFEELEARMGAKQ"
BASE COUNT          661 a         1339 c         1374 g          695 t
ORIGIN      
        1 ccggaagagc cctgtttctt cttgtcgttg gtggagaggt cgggcgagat cacctcccag
       61 gactgcccgt agttgcgggt ccgaaagagc acgttcccgc cgaaatacac cgtcttcgaa
      121 tcggcggggt cgaggacgat cggcgcattc cagttgaagc gatacttgtg ctcggcgagc
      181 gagtcgcccg cggagccgac tcggcgcgga tagggatgga tcgagcgctg atcgccggtg
      241 cgcatatcgg tgagcacgat gccgccgccc tgcgaggcgg aatacaccag cgagggctcc
      301 ttgaggtcgg gcaccgcgaa gaagccgtcg cccccgctca cggtcaccca ggcgttctta
      361 cgattgccct gattcgacag cgtccggctc ggcccgcacc agtggccgtt gtcctgcagg
      421 ccgccgcaga ggttgtacgg cttctccatg tcgtagttga cgtgatagaa ctgggcgaag
      481 gagacggtat tgactacctc ccagcttctc ccggcgtcat aggaaacctg ccagcccccg
      541 tccgacccct cgaggatgta gttcccgtcg gtcgggtcga tccacatggc ctggtgatcg
      601 ccgtggatgt cccccccgat gcgctggaag gtccggccgc cgtcctgtga cttgttgagc
      661 gagccggaca gggtgtacac cacattggga ttggcgggat ccgcgcgcac atcggagtag
      721 tagaacggcc ggaaattgat gttgggatcg cggttcaccg tctgccaggt cttgccgccg
      781 tcctcggtcc gccagagctc gccttcgctc ttcgtttccg aaacgacgta gaccacgttg
      841 gggtcggcac ggtgcacgga aatcccgatg cggtccatgt cgccctcggg aagcccgcgg
      901 ccattggcct tgccggaaag ccgggtccag ctctcgcccc cgtcgaccga caggtagacg
      961 ccggtgccgc cgccacccga ggtgaagtac cagggccagc gctgatgccg gtgcatgccg
     1021 gcccagacga cgttcgaatt gccaggatcg atgtcgacgt cgctgcagcc ggtgagctcg
     1081 tccacgtaga ggatcttgcg ccagctcttg ccgccgtcgg tcgtcttgaa cagcccgcgc
     1141 tcctggttgg gtccccaggt gcggccgagc gcgcagacga acacgatctc cggattcgcg
     1201 ggatcgatgc ggatgcgcgg aatcttctcg gtgttctcga gcccgagctt tttccagctc
     1261 ttcccgccgt cgagcgactt gtacaccccg tcgcccacac tggcggagtt gcggggattc
     1321 ccctcgccgg tgccgaggta caggatgctg tggttcgaag gcgcgatggc gaggtccccg
     1381 atcgaggcgt tctcctggtc gtcgaacagc ggctcgaagg tgaccccgcc gttgctggtc
     1441 ttgaagagtc cgcccgcagc ggcgccgacg taataggtcg agcgatcgcc ggggattccc
     1501 accaccatcg ggatgcgtcc cgcctggttg gcgggcccga tcgagcgcca gcggaggtcc
     1561 ttgagcgctt tgagctcggg cgtgtcggtg aggggagccg cgctggaggc gccgggtcgg
     1621 gcgggtgcct gggcgtacag tgatccgagt gcgaggagcg agcccaggat cccgagggag
     1681 cagcgtgccg gcattggcgt accatgtgaa gggggcaggc gaatcgtatc gcgggcgcgc
     1741 ggcggtcgct acccgcctcg ctggctcagc gcggccatga agcggcgagc ccgtccgggg
     1801 gcgggaccgg gtgaacgggg tcccttggcc tgtgggacgg gggcgacctc caacacggcg
     1861 aagacggggc ccgtcgcggt aagcacactc tcgagaccgt gtcgccatcc gtcgagcgtg
     1921 tcgaaactga ataccgaggt gagcccactt gcccgggcca gagtggcgaa gtcgatccga
     1981 tcaccggcca cgcgcccggc gggcgccgac ggcgtgggct gcgcgccggt gatctcgtac
     2041 acgccgttat cgagcaggag caccacgaga ttcggcggtg cgtaggcgct caaagtgacg
     2101 agcgagccca ggttcatcag catcccgccg tcgccgttca gcacgatgac ccggcgctcc
     2161 ggctgggcca gggccaggcc gagtccgagc gaagtggcct gccccatgct cgagggcacg
     2221 aagacccagt cgagtcgctg ggttcccagc gccatccact cgcgggcggc gcccatcgcg
     2281 gagatgacga cgtcgtccgg gcggcggacg gcatggagcg cgcggagcgc gtcgaccagc
     2341 gacatgccgc tcacgccttg ccctccgcaa gcagcacggc gcgcggcgct gccgcggtgg
     2401 catagccctg caggtgctcg gccagctccg cgaactgttc cggtgccgtg atgagcttgt
     2461 agtccatcgc ccaggcacgg aggatcggct cggtaaagct gagacaggta tcgccgggca
     2521 gggtgtcctg attgaggtag ctccggtagc cgataatgct cgggatgggg agcttccagt
     2581 cgtgcagcac gttgcggagc gcgtcacccg attcaaacag cccggtgcac tggatcatga
     2641 cgagcgggcg gcggccgccg aggtaaaggc ccgcagccac ggcccaggct tcgccctctc
     2701 ggcagacccg gatcaggcga atgccgctct gctcgatggc ggtttcccat tggccgatgg
     2761 tgctgtcggg caccgtgacg acgtcggtga tgccacaccg ttcgaggagc cctgcgatct
     2821 gctcgccgga aaacatgggt caggcggcgc tcactgcttg gcgcccatcc gggcctcgag
     2881 ctcctcgaac caatgcaaga ccagcacgat ctccccgccc gagccggtcc cccggcggct
     2941 catgatgaag cgctggtcgt ccggactcag gttgtaacgg gcgtgctcgg ggtcgttgtc
     3001 gaaatcgccg gtcgaaaaga gctgcttccg atcccgcacc ccaaagccgc gctccaggtc
     3061 gagcgaggcc accatcatct gatcgtcgtt cgacttgtag aacagctcgt gcccattgtg
     3121 ggcccagacc ggttcccgcc ccccgccgac cgaaacctgc cacttcccgt cgtccacctt
     3181 cgggaacggt cgcacgaaca cgtcggtctg gttggattcc aacgaagtgt atgccagcca
     3241 tttcccatcg ggagatagtc ccggcgccgt ctcggcgaat cgggtggcga ccaggggaac
     3301 cggcatcgta tcgatgcccg gccggaagcc catgatgtct ccgctgcccc cgctgctgct
     3361 ctcggtgcgg tagatcagcc acttgccgtc gggcgaccag aacccttcgg cgatcggacg
     3421 ttgctcgtgc ttcggggtga gcagctcggc tgtcccgctc ccaccagcag gttgacggta
     3481 gagctggctg gtccccgaac gatcgctgat gaaggtgatc gagttcccgt ccggggacca
     3541 ggtgggccgc tggttcgtct ggccctcgaa tgtgaagcgg gttagagggc cgcggtccag
     3601 ctccttgatc cagagatcgc gaggtccttc actgaccatg ctgaccacca ggcgcttccc
     3661 atcgggcgac agcgcgtggg tgatgaaatc ggaggtccag ctcgagtcca cctgcgtggg
     3721 cttgccgtca cgcgtgaccc aattgaggaa ctccaccccg ccaccgcccg ctccaccccc
     3781 gctatagacc agcgtaccct ggctggagat cacgtagtcc ccgaccccat aggtccggac
     3841 cgccatccct tcgaccacgg cgacgggggc gccggtcacc tggcggcggg cgggatcgaa
     3901 gcgcacggcg agcagcgtcc cgtcattccg caggtagacg aggtggccgg tgggcagata
     3961 acggggcatc gtacctgcca gtagcacgcg caccgctctg gtcttgagat cgagcaccgc
     4021 gatctcacga ttgttgccgc ggatgaccgt gaacaccacg ccgtcccgc
//
LOCUS       DASYRV010000008         1507 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_210205, whole genome shotgun sequence.
ACCESSION   DASYRV010000008 DASYRV010000000
VERSION     DASYRV010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_210205"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            195..593
                     /locus_tag="VGQ24_00150"
     CDS             195..593
                     /locus_tag="VGQ24_00150"
                     /inference="COORDINATES: protein motif:HMM:NF016290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4136 domain-containing protein"
                     /protein_id="HEV8453273.1"
                     /translation="MAVLPFDNQTPEPTLTQEISQAVREAVESRLGLRQSAETRADAV
                     VRGSIIRYEPDLPVAYTGGDSSRVTVTRRQVQITVSVEILDQKQGKPLWQRNGLIVRG
                     DYDSGREAEGRRKALDDLVVNIVEGAQSQW"
     gene            587..955
                     /locus_tag="VGQ24_00155"
     CDS             587..955
                     /locus_tag="VGQ24_00155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453274.1"
                     /translation="MVKLWRRSRSGTGRPAFLASLALFVAALYYGFNIGQIYFRYYHL
                     LDTMQTQAQLAPGLNDAVIHRRLAGEADSLLPGASPRFTITRGGNPNRITITTEYTEK
                     VDLPLFKHTFVLRPRAEEPL"
     gene            960..>1507
                     /locus_tag="VGQ24_00160"
     CDS             960..>1507
                     /locus_tag="VGQ24_00160"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEV8453275.1"
                     /translation="MELLSIPSLFFVLATMLVAAKLLGELAERVGQPAVLGELVAGML
                     LGGSVLGVVPVGGSAAEVVHVFAELGVVLLLFEIGLETDLREMFRVGTASLSVATVGV
                     ALPFALGFAYWAYLPHAASGGTTDLTIAAIFVGATLTATSVGITARVLSDLSCMNTQE
                     AKIIIGAAVIDDVIGLVILTVVS"
BASE COUNT          234 a          486 c          493 g          294 t
ORIGIN      
        1 ccccgatgga accccgctga aggcacggct tacggtaccg agcgcgccgg cacaactcga
       61 cctgaccttt ctctccacga agcgggcctc ctttgcgcct gaaatctggc tgcctcgcaa
      121 gccttagcgc cctcgctctc agcggttgcc tctatggctt tgccggtggc gggctgccgc
      181 cgtcgatcaa gacggtggcc gtactcccgt tcgataatca gacccctgag ccgacactca
      241 cccaggaaat ctcgcaggcc gtgcgggagg cggtcgaaag ccggcttgga ctgcggcagt
      301 cggccgagac gcgggcggat gcggtggtgc ggggctccat catccggtac gagccggatc
      361 ttccggtcgc atacaccggg ggcgatagca gccgggtgac cgtcactcgc cgccaggtcc
      421 agatcaccgt ctcggtggag atcctcgatc agaagcaggg aaagccgctc tggcagcgga
      481 acggtctcat cgtgcgagga gattacgact ccggccggga agccgaggga cgcagaaagg
      541 ccctggatga tctggtggtc aacattgtgg agggagctca atcgcaatgg tgaagctctg
      601 gcgaaggtcc cggagcggca ccggtaggcc ggcgtttctg gcgtcgctcg cgctgttcgt
      661 ggcggcgttg tactacgggt tcaacatcgg ccagatttat ttccgctact atcacctcct
      721 cgacaccatg cagacccagg cgcagctcgc gcccggcctg aacgatgctg tcatccaccg
      781 gcgcctggct ggtgaggccg attcgctcct ccccggcgcc tcgccacgct tcacgatcac
      841 ccggggcggg aaccccaacc ggatcaccat caccaccgaa tacacggaga aggtcgacct
      901 ccccctcttc aagcacacgt ttgtcctgcg tccacgggcc gaggaaccgc tttaggtccg
      961 tggaactcct ctcgattccc tctctgttct tcgtgcttgc gacgatgctc gttgccgcga
     1021 agctgctggg cgagctggcc gagcgggttg ggcagcctgc cgtcctgggg gagttggtgg
     1081 ccggcatgct gctgggcggg agcgtgctgg gggtcgtgcc cgtcggcgga tctgccgccg
     1141 aggtggtcca cgtatttgcc gagctcggtg tggtgctgct gctgttcgag atcgggctgg
     1201 agacggatct ccgcgagatg ttccgcgtcg gcaccgcctc gctctccgtg gcgacggtgg
     1261 gagtcgcctt gccgtttgcg ttgggctttg cctactgggc ctatctgccg cacgccgcat
     1321 cgggcgggac caccgatctt accatcgccg cgatcttcgt aggagccacc ctgacggcga
     1381 cctcggtcgg cattaccgcg cgggtgctgt cggatctatc ctgcatgaat acccaggagg
     1441 ccaagatcat catcggggcg gcggtcatcg atgatgtcat cggcctggtg attctgaccg
     1501 tggtgtc
//
LOCUS       DASYRV010000009         4124 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_624733, whole genome shotgun sequence.
ACCESSION   DASYRV010000009 DASYRV010000000
VERSION     DASYRV010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4124
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_624733"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..249)
                     /locus_tag="VGQ24_00165"
     CDS             complement(<1..249)
                     /locus_tag="VGQ24_00165"
                     /inference="COORDINATES: protein motif:HMM:NF012390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEV8453276.1"
                     /translation="MRRGGPKVRLARQLGIALTPKAARVMERRPNPPGQHGATPRRKV
                     SGYKKQLVEKQRLRAQYNMSERQLSNAFAEAIRQSGTTG"
     gene            454..855
                     /locus_tag="VGQ24_00170"
     CDS             454..855
                     /locus_tag="VGQ24_00170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453277.1"
                     /translation="MKMLRQIALLTAVLALSLAARATAQAQSVTPAGSSDAVGCGQRC
                     YRVALPLGFYVQEVIEDGRYVMLEDGSVWEIRLSQRPVASSWRPGDFVQLKTIWAPVD
                     RYEMLLAHGDNDKAEARLAGRGRAPATGLPD"
     gene            complement(866..1663)
                     /locus_tag="VGQ24_00175"
     CDS             complement(866..1663)
                     /locus_tag="VGQ24_00175"
                     /inference="COORDINATES: protein motif:HMM:NF020442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FRG domain-containing protein"
                     /protein_id="HEV8453278.1"
                     /translation="MSIPEVVVRSLGDLIDKVTPTEPDPRTGRRRDSGVYRGDRDARW
                     PLLTSLDKLGGARSPHSKADLEEHILRNFIRYSRPYFAQPPVNEWEVLVAAQHHGLPT
                     RLLDWTYSPLVAAHFATLGGEDESDRVVWRLDWKSVHRSFGLPELALLIQDLEGILGG
                     ERPLTPWTLFSASRGAREFACMLEPPSLNARIAAQSSTFTLCSEKRQSFDSFLEGHGL
                     GTALTKLIIPAKETARFRDQLDLVSVDERRLFPDLDGVAAEMRRYYS"
     gene            1812..2051
                     /locus_tag="VGQ24_00180"
     CDS             1812..2051
                     /locus_tag="VGQ24_00180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453279.1"
                     /translation="MAVREARLRPEWAHLYPGVEAEVWMVAAQLVPLVLRNRLQDQPT
                     WEFTHRILVDEHFDFRGGRDRDGSWSGVLTRVEDA"
     gene            complement(2087..3928)
                     /locus_tag="VGQ24_00185"
     CDS             complement(2087..3928)
                     /locus_tag="VGQ24_00185"
                     /inference="COORDINATES: protein motif:HMM:NF036516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEV8453280.1"
                     /translation="MISPRALRLPLTCALILIGGPAARAQQKTTPTPVPAQSAPITNL
                     RYELTFDSTTARQRMIKVAMSFDIGGEGAVLLSLPAWTPGAYEISNFSRWVLNFSAGT
                     AGKSVRWDKLDYDTWRVQPGGSRSLTVRFDYRADSLDNAMAWSAPDFVLFNGTNLLLY
                     PEGRGFDFPATVTVKTQPGWQVATGMKPAGAPRSYRENNYHDLVDMPFFVGRIDYDSM
                     QVGGRWTRLATYPVGTLTDSSRKQLWNQISHMIPAESAVFQETPWNTYDVMIIFDPRY
                     PGASALEHQSSHVGIYNQGIIGNPLLASITAHEIFHAWNVKRLRPADMWPYHYGQAQP
                     TPWLWVSEGITDYYADLALVRGGIVDSAQFMTSTGEKAATVGEAPPTALEDASLSTWV
                     HPTDGTAYLYYPKGSLAGFMLDILIRDYSDNARSLDDVMRQLYQTVYQKGRGFTENDW
                     WPAVTRAAGGRAFSDFYVRYVDGRDPYPLDRILPLAGMRMTIDTVREPRLGISTVADS
                     TGIFVNAVLPGGAAQQAGVRPGDQLLALGDLPVGSPDFGPAFRARYGKEDGASLPIKV
                     RRGGDTLTLNSKLRLVSRVERRIEADPAASPKAVRIRSGILKGSTGS"
BASE COUNT          738 a         1290 c         1331 g          765 t
ORIGIN      
        1 gccggtagtc ccgctctggc ggatcgcctc ggcgaacgcg ttactcagct gccgctcgct
       61 catgttgtac tgggcccgaa gccgctgctt ttccaccaac tgtttcttgt agccactcac
      121 cttgcggcgt ggggtggcgc cgtgctgccc cgggggattc ggccggcgct ccatgacgcg
      181 agccgccttc ggggtgagtg caatgcccag ctgccgagcc agtcttactt tcggtccacc
      241 acgtctcaca agtcgttctc ctcggttccc tggttcaaga tccactcgtt ttcagccctc
      301 atatgtaaac ccaatgcgcc tttggcggaa ggcgtggacc cgaatatgac cggagccgac
      361 ctgtccgccg ttgcgtcggc ccgacatggc agctcacagc ggaccgccga atcttgctgt
      421 atcatgggta tacaaacgat ggagggtgcc cccgtgaaga tgcttcgcca gatcgcgctc
      481 ctgactgccg ttctcgctct ctctctggcc gcccgagcca ccgctcaggc ccagagcgtc
      541 acacccgctg ggtcgtccga tgctgtcggc tgcggccagc gttgctatcg agtcgccctc
      601 ccactgggtt tctatgtgca ggaggtgatc gaggatggcc gctacgtcat gttggaggat
      661 ggcagcgtct gggaaatccg tctcagccag cgcccggtag cgtccagctg gcgccctgga
      721 gatttcgtcc agctgaagac catatgggca ccggtagacc ggtacgagat gctgctggcc
      781 catggcgata acgacaaagc cgaggccaga ctcgcggggc ggggacgcgc gccggcgaca
      841 ggcctgccgg actaatcacg cccgctcagg agtagtagcg tcgcatctcg gccgccacac
      901 cgtccaggtc ggggaagagt cgccgctcgt ccacgctgac cagatcgagc tggtcgcgga
      961 aacgagcggt ttcctttgcg gggatgatga gcttcgtcag cgcggtgccc aggccgtggc
     1021 cttcgagaaa actgtcgaat gactgccgct tttcggaaca gagcgtgaag gtagacgact
     1081 gagccgctat ccgggcattc agggacggcg gctcgagcat gcaggcgaac tctctggctc
     1141 ctcgcgacgc cgagaacaac gtccagggtg tcagcggacg ctcccctccc aggatgccct
     1201 cgagatcctg aatcaatagg gccagctctg gaaggccgaa ggagcggtgc acgctcttcc
     1261 aatccaaccg ccacactact ctgtccgact catcctcccc accgagagtg gcaaagtgag
     1321 ccgccaccag gggagagtag gtccagtcga gcagccgggt gggaaggccg tggtgttggg
     1381 cggcaacgag cacctcccac tcgtttaccg gtggctgggc gaagtacggc cgcgaatagc
     1441 ggatgaagtt ccgcaggatg tgctcctcga ggtcggcctt gctgtgcggc gacctggccc
     1501 cacccagctt atccaggctg gtgagcagcg gccagcgcgc atcccggtcg cctcgataga
     1561 cgccgctgtc ccgccggcgc ccggtccttg ggtccggttc ggtcggggtc accttgtcga
     1621 tgagatcgcc gagacttcgc accaccactt cgggaataga catcgtgagc tggaatgtac
     1681 tgcggcaacg atactgtgac atacgtcctt gcacccgtcg gcgcaggcgc caaacatgca
     1741 cgtgagccag cccgctgacg ctccggcccc tgccggaagt ccgctacggg cgcaacgtcg
     1801 ggacgttcga aatggcggtg cgggaagcac gactccggcc cgaatgggcc cacttgtacc
     1861 ctggggtgga ggcggaggtg tggatggtcg cggcccaact ggtcccactc gtcctccgta
     1921 accggctcca ggaccagccg acctgggagt ttacccatcg gattctagtg gacgagcact
     1981 tcgattttcg gggtggccgg gatcgggacg ggagctggag cggggttctg acccgagtcg
     2041 aagacgcctg acagcgaccc gagctgagtc cccgaggccg agcgtcttac gagcccgtgc
     2101 tccccttcag aataccgctg cggatccgca ctgccttcgg cgaggcggcc ggatcggcct
     2161 cgatacggcg ctcgactcga gagaccaggc gtagcttgga attcagggtg agggtatcgc
     2221 ccccgcggcg taccttgatc ggtaggctgg caccatcctc tttcccatag cgggcccgga
     2281 acgcagggcc aaaatcagga cttccaaccg ggaggtctcc cagcgcgaga agctgatcgc
     2341 ctggccgcac ccccgcttgc tgtgccgcgc caccggggag cacggcgttg acgaagatcc
     2401 cggtggagtc ggcaacggtc gatatgccaa gcctcggctc tctcacggtg tcgatagtca
     2461 tccgcattcc cgcaagcggg agaattcgat ccaggggata aggatcccgt ccatcgacgt
     2521 accggacgta gaaatccgaa aaggctcgcc cacccgccgc cctcgtcacc gccggccacc
     2581 aatcgttctc ggtgaagccg cggcccttct ggtacaccgt ctgatagagc tggcgcatga
     2641 cgtcgtccag cgaccgggcg ttgtcactgt agtcgcggat gaggatgtca agcatgaacc
     2701 ccgcgagcga tcccttggga tagtacaggt atgccgtgcc atcggtcggg tggacccaag
     2761 tggacaggga cgcatcttcg agcgccgtgg gcggagcttc tcctacggtt gccgcttttt
     2821 cgccggtcga cgtcatgaat tgcgccgaat ccacgatgcc gccgcgcacc agcgctaaat
     2881 ccgcgtaata gtcggtaatg ccttcgctga cccagagcca cggcgtgggc tgggcctgac
     2941 cgtagtgata aggccacatg tcggcgggac gaaggcgctt cacattccag gcgtgaaaga
     3001 tctcgtgcgc ggtgatggag gccagcaagg gattcccgat gatcccttga ttgtagatcc
     3061 caacgtgtga gctctggtgc tccagcgcgc tcgctcctgg gtacctgggg tcgaagatga
     3121 tcatgacgtc gtacgtgttc cacggggtct cctggaacac cgccgactca gcggggatca
     3181 tgtgggaaat ctggttccaa agctgtttcc gggaggaatc agtcagcgtc ccgaccgggt
     3241 aggtagccag ccgggtccag cggccgccca cctgcatgct gtcatagtcg attcttccca
     3301 cgaagaacgg catatcgacg aggtcatggt agttgttttc gcgatacgat cgcggcgccc
     3361 cggccggctt catgccggtg gccacctgcc agccgggttg cgtcttcacg gttacggtgg
     3421 caggaaaatc gaatccgcgg ccttccgggt aaagcagcag attggttcca ttgaagagca
     3481 cgaagtcagg cgcagaccag gccatggcat tgtcgagaga atccgcccgg tagtcgaagc
     3541 gcaccgtgag cgagcgcgag ccgcccggct gcacccgcca ggtatcgtag tcgagcttgt
     3601 cccagcgtac gctcttgcca gcagttccgg cggagaaatt caagacccag cgggagaagt
     3661 tgctgatctc gtacgcgcct ggggtccagg ccgggagcga cagcaggacg gctccctcgc
     3721 cgccgatgtc gaaggacatg gccaccttga tcattcgctg gcgtgcggtg gtcgagtcga
     3781 aggtcagctc gtaccggaga ttggtgatgg gggccgactg ggccggaact ggtgtcggtg
     3841 ttgtcttctg ctgtgctcga gcggcgggtc cgccaatcag gatcaaagcg caggtcaggg
     3901 gaaggcggag ggctcggggg gaaatcatcg acgtatcctg gggttctgag agtcaggttc
     3961 ggctactctc cggggccatg gccggcacag cggcgtcggg tgctactgcc tgggtgaatg
     4021 gctcggcgcc tggcttgaat tctccctccc agcgccccat gaccacggta gcaagacagt
     4081 tccccaccag gttgaccatg gtccgagcca tatccatgag ctca
//
LOCUS       DASYRV010000010         2115 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_834238, whole genome shotgun sequence.
ACCESSION   DASYRV010000010 DASYRV010000000
VERSION     DASYRV010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_834238"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..759
                     /locus_tag="VGQ24_00190"
     CDS             <1..759
                     /locus_tag="VGQ24_00190"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEV8453281.1"
                     /translation="MPQGGRLRIRTSATTLSEGLLHAGGMIPPGRYCVLSVADEGTGM
                     PPEVLSRIFEPFFTTKGGTRGTGLGLSTVYGIVEQLGGHLVVQSAPGRGSSFELYLPM
                     LEATATVMVQRPMGVALGDEVILVVEDLGAIRSLAQRTLSRAGYRVVTAESGEEARMA
                     GRRAPRIDLIVMDVMLPGERGPAVARELKELHPAARIIYVSGNLGMREEDSSPDGQQW
                     FLQKPFSPEQLLSIVRTALDAPVQSGVAPETPRT"
     gene            773..859
                     /locus_tag="VGQ24_00195"
     tRNA            773..859
                     /locus_tag="VGQ24_00195"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:807..809,aa:Ser,seq:tga)
     gene            complement(866..1285)
                     /locus_tag="VGQ24_00200"
     CDS             complement(866..1285)
                     /locus_tag="VGQ24_00200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453282.1"
                     /translation="MRMHSWGSLAFGAALLLMAGCGSKAKVAGTPTNKVNVIELGRSL
                     NADRTVKDPTDIFQPTDTIYASVETETLGSAMLTARWTFEDGQTVDSTTQRVPASGGV
                     IRSEFHVWKPGGWPVGKYHLQITLDSTVSGVKEFTVK"
     gene            complement(1309..1602)
                     /locus_tag="VGQ24_00205"
     CDS             complement(1309..1602)
                     /locus_tag="VGQ24_00205"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEV8453283.1"
                     /translation="MGFLDKLFDRKRANAAVKGGRPDFSNVESGSSTAGDPNAVSRPA
                     GPRMYTVVKGDSLSKIAEREYGDANRWREIYEVNRATIKNPNLIYPGQKLRIP"
     gene            1694..>2115
                     /locus_tag="VGQ24_00210"
     CDS             1694..>2115
                     /locus_tag="VGQ24_00210"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEV8453284.1"
                     /translation="MPLPVQTGLVRAIRRWDLVALAINAIIGAGIFGLPSEVFRRIGV
                     YSLFAFAACALVVTLIILCFAEVGSRFTGTGGPYLYAREAFGPVVGFEVGWLIWVARV
                     TAFAANSNLFVDYLGFLWPAAGTGVGRAVTLGLIVLALT"
BASE COUNT          330 a          685 c          691 g          409 t
ORIGIN      
        1 atgccgcagg gcggccggct caggattcgc acctccgcga ccaccttgtc ggaggggttg
       61 ctgcacgcgg gcgggatgat cccgccaggt cgctactgcg ttctaagcgt cgctgacgaa
      121 gggaccggca tgccgccgga agtgctgagc cggatcttcg agcccttctt cacgacgaaa
      181 ggaggcaccc gcggtaccgg gctcgggctc tcgacggtgt acggcattgt ggagcagctc
      241 ggcgggcatt tggtggtgca gagcgcccct ggccggggca gcagcttcga gctgtacctc
      301 ccgatgctgg aggccacggc aacggtgatg gtgcagcgac ccatgggagt ggccttgggc
      361 gatgaggtca tcctcgtcgt ggaggacctg ggggccattc gcagcctggc ccaacgcacc
      421 ctgagccgcg cgggttatcg ggtcgtcacg gcggagagcg gcgaggaggc gcggatggcg
      481 ggccggcgcg cgccacggat tgacctgatc gtcatggacg tcatgctccc gggcgaacgc
      541 ggcccggcgg tcgcccgcga gctcaaagag ttgcacccag cggcccgcat catctacgtc
      601 tcgggtaacc tggggatgcg ggaagaggac agctcgccgg acggccagca atggttcctg
      661 cagaagccgt tcagccccga gcagctgctc tcaatcgtgc gtacggccct ggatgcgccg
      721 gtccagtcgg gcgtcgctcc cgagacacca aggacttaaa ttcggtgccg gaggcgtggt
      781 ggccgagtgg ttgaaggcag cggtcttgaa aaccgccaag ggggaaactc cttcgtgagt
      841 tcgaatctca cccacgccgt acctttcatt tcaccgtgaa ctccttgacg cccgacaccg
      901 tgctgtcgag cgtgatctgc aggtgatact tcccgaccgg ccagccgccg ggcttccaga
      961 catgaaactc gctacggatg acacccccgc tcgcgggaac acgctgggta gtggagtcca
     1021 cagtttgacc gtcctcgaat gtccaccggg ccgtgagcat cgccgagccc agcgtttcgg
     1081 tctcgaccga agcgtaaatc gtgtcggtgg gctgaaagat atcggtggga tccttgactg
     1141 ttcgatcggc gttgagcgac cggcccagct cgatcacgtt gaccttgttg gtgggggtcc
     1201 cggccacttt ggccttcgag ccgcaccccg ccatgagcag cagcgctgct ccgaacgcca
     1261 agcttcccca actgtgcatg cgcatctcgg tctcccgctc gcggcggcct aagggattcg
     1321 cagcttttgt cctggataga tgaggttggg attcttgatc gtcgcgcgat tcacctcgta
     1381 gatctcccgc caccggttcg catcgccgta ctcgcgctcg gcgatcttcg agaggctatc
     1441 gcccttgacg acggtataca tccgcggccc tgccggacgg ctgaccgcgt tcggatctcc
     1501 cgcagtcgag gacccggact ccacgttgga gaaatcgggt ctgccgccct tcaccgcagc
     1561 gttggcgcgt tttcggtcga acaacttgtc cagaaacccc ataatgtcct cgggtgtgaa
     1621 tttggctcat ggccggccac gattggtgac gtgcgggcgg cccgggtgag cacgcgatag
     1681 attgacccga tccatgccac tgcccgtcca gaccggactg gttcgcgcga tccgcaggtg
     1741 ggacctggtt gcgctggcca tcaacgccat tatcggcgcc ggtatcttcg gcctcccgtc
     1801 ggaagtcttc cggcgcatcg gcgtgtacag cctgttcgcc ttcgccgcct gcgcgctcgt
     1861 cgttactctc atcatcctct gtttcgccga ggtcggcagt cgcttcaccg gcaccggcgg
     1921 gccctatctc tatgcccgcg aggcattcgg accggtggtg ggcttcgagg tcggctggct
     1981 gatctgggtc gcccgggtga ccgccttcgc cgccaacagc aacctcttcg tggactatct
     2041 gggattcctc tggccggcgg cgggaaccgg agttggccgc gccgtgaccc tcggcctgat
     2101 cgtgctcgcc ttgac
//
LOCUS       DASYRV010000011         4970 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1665668, whole genome shotgun sequence.
ACCESSION   DASYRV010000011 DASYRV010000000
VERSION     DASYRV010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4970
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1665668"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..416)
                     /locus_tag="VGQ24_00215"
     CDS             complement(<1..416)
                     /locus_tag="VGQ24_00215"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HEV8453285.1"
                     /translation="MANSPTLHAVIFRIGEIICAAPAGIVREILPRLPATRIPGVPDA
                     VEGLVNVRGSLLTVLDGHLLLQQERRPSDEGAIVVLEARGRNYGLGVGQVLDFLEVPA
                     ASVVERRDLPGVDPRLVKAVGVGADQHFILLDVDAL"
     gene            complement(409..1413)
                     /locus_tag="VGQ24_00220"
     CDS             complement(409..1413)
                     /locus_tag="VGQ24_00220"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEV8453286.1"
                     /translation="MPDVEFTVFSLQTERLDRFLADQMAISRTQAARLVADKLVSIDG
                     KPARASHLLSRGQRVAVRLPDQEPPRTIRPAAIPLTLVFEDEHLAVIDKPAGLVVHPA
                     PGHWDDTLVNALVARGTTLAGGAEGRPGIVHRLDRDTSGLMLVAKTDLAHRRLGAALA
                     ARRVSRSYAALAWGHLDSSPTRVEAAIARHPHDRKRMAVSPAGRVARTEASVVARFDV
                     VDLLRLELHTGRTHQIRVHLEHIGHPVLGDPVYGGGGSRRISGGARRTAEMLDRITPR
                     QALHAAALAFRHPVSGAPLEFRSEWPEDLRPALVAAGGEELVARAEPLSYLRFFNRDG
                     "
     gene            complement(1430..1960)
                     /gene="lspA"
                     /locus_tag="VGQ24_00225"
     CDS             complement(1430..1960)
                     /gene="lspA"
                     /locus_tag="VGQ24_00225"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: protein motif:HMM:TIGR00077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HEV8453287.1"
                     /translation="MANAADPATPGADRRVFVLAAAATVVLDLVTKVIAEATLLRTPG
                     VSVFGDWFQLRLVYNQGAAFGLHVGPYSRWIFFTVALVAVFVLARMSRSSPSGDRFRQ
                     LALGLVAGGAVGNLIDRVRSARGVVDFLDVGIGALRWPTFNFADIAVSCGAIALAISL
                     WREDARRPEPESASVV"
     gene            complement(1944..2327)
                     /locus_tag="VGQ24_00230"
     CDS             complement(1944..2327)
                     /locus_tag="VGQ24_00230"
                     /inference="COORDINATES: protein motif:HMM:NF013427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA C4-type zinc finger protein"
                     /protein_id="HEV8453288.1"
                     /translation="MNKKQLSHLEKRLMEERARVMKELGFYDESFNATLQSADGDLSS
                     YSFHMADQGTDAMEREKQFLFASQEGRYLWHVNEALRRLYGSPEKFGHCQQCGQEINF
                     ERLDALPHARLCITCKEREEDGKRR"
     gene            complement(2352..>4970)
                     /gene="ileS"
                     /locus_tag="VGQ24_00235"
     CDS             complement(2352..>4970)
                     /gene="ileS"
                     /locus_tag="VGQ24_00235"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEV8453289.1"
                     /translation="CPRCGTVLSSHELALGYENVTTNSVYVTFPLEQDPKRQLLVWTT
                     TPWTLLSNVAVAVHPEMEYGEYAVGDRRLILATARASLPSGPQRDAPSFSELGAIRTF
                     QGHELIGQRYQRPLDVVPLPEDRTSRLVIAADFVTAEDGSGLVHMAPAFGADDFQAGI
                     EHGLALVRPVAPDGTFVGTDWPEIEGQLVTARETNDRIVQRLKQEGRWHLTQPYTHKY
                     PHCWRCSSPLIYYARDSWFIRTSAVKDRMLELNREVDWHPPEVGAGRFGEWLENNVDW
                     ALSRERYWGTPLPVWVCEDDPSHIEVMGGYAELAERWGRALPEGFDPHKPFIDEYTWA
                     CHCGGRMRRTPEVIDTWFDSGSMPYAQWHYPFEHQDEFAAHFPADFICEGVDQTRGWF
                     YSLLAIATAAFDSTAYRHVIVNELVLDAEGQKMSKSRGNVVDPWTMIREFGADTIRLY
                     LLASSQVWLPKRFDPRTIPDVAGKFFNALKNSYVFFAGYAGDWLPEAAPAPADRALVD
                     RWLLSQLDATVETVTNAWNGYDVTAGVRAIMDFVVDDVSQWYVRLNRPRFWAPDAVPD
                     PAALATLHETLTTVTRLLAPAAPFLSDWLHRALAGTSVHLARFPVPRGLRVPELEAAM
                     DAVRRLASLARSAREERNIRVRQPLGRMQVAVPAGVRGPALDELLELLRAEVNVKDIQ
                     VVASDTELVRLRPKPNFRTLGKRYGKRTPAVVAATASLTPGQLRSLEDGSPATLELEG
                     EPVTYMPEDVAVEREVASDWLVQSSGPFVVALDPHLDDALRREGLAREVVNRVQRIRK
                     EAGYLYTDRIALWIDGDPPLADAVNAHAGFIRGETLARGLEVGARAPAADLEQRVDID
                     GYGAVVGVKRYQHGRD"
BASE COUNT          901 a         1658 c         1598 g          813 t
ORIGIN      
        1 aacagggcgt ccacgtcgag caagatgaag tgctggtccg cgccgacccc tactgctttc
       61 accagacgag ggtcgacccc gggtaggtcc cggcgctcga caactgatgc ggcgggaact
      121 tcgagaaagt cgaggacctg cccgacgccg agcccgtagt tgcgccccct cgcctcgaga
      181 acgacgatgg ccccctcgtc ggagggtcgc cgctcttgct gaagcaggag gtgcccgtcg
      241 agtacggtga gcaggctgcc ccggacgttc accaatcctt caaccgcatc cggcacacca
      301 ggaatccggg tggccggcag gcgagggaga atctcacgca cgatccctgc cggggccgcg
      361 cagattatct caccgattcg aaagatgacg gcgtggagcg tgggagagtt agccatctct
      421 attaaagaaa cgaagatagc tgaggggctc tgcgcgggca accagttctt cgccacccgc
      481 tgcaaccagt gcaggcctca aatcctcggg ccactcggag cggaactcaa gtggtgctcc
      541 gctcacagga tggcggaatg ccagagcagc cgcatgaagg gcctggcgcg gggtgatccg
      601 gtccagcatc tcggcagtgc gtcgggctcc tcccgagatc ctgcggcttc ctccaccccc
      661 atacaccggg tcacccagca ccggatgccc gatgtgctcc aggtggaccc ggatctgatg
      721 ggttcggccg gtatgcagct ccagccgcag caggtcgacc acatcgaagc gggcaacgac
      781 gctcgcctcg gttcgggcga cccgcccggc gggggagacg gccatgcgct tccgatcatg
      841 gggatgccgc gcgatcgcgg cctcgacccg ggtaggactg gagtcgagat ggccccacgc
      901 caaggcggcg tagctccggc ttacccggcg ggctgccagg gcggcaccca gacgccggtg
      961 ggccagatcg gtcttggcca ccagcatgag ccccgaggtg tcccggtcca gtcggtggac
     1021 gatgcccggc cgcccttccg cacctccagc cagtgtggtg ccgcgcgcga ccaacgcgtt
     1081 gacgagggtg tcgtcccaat ggcctggcgc cggatgcacg accagtccgg ccggtttatc
     1141 gatcacggcc aggtgctcgt cttcgaagac caatgtgagt gggatggccg ctggccggat
     1201 ggtgcgcggg ggttcctgat cgggcagccg caccgcaacc cgctggccgc gggagaggag
     1261 gtgggaagct cgggcgggct tcccgtctat ggagacgagc ttgtcggcca ccaggcgggc
     1321 ggcctgggtt cgagagatcg ccatctggtc ggcgagaaac cgatcgagac gctcggtttg
     1381 cagactaaaa acagtgaatt cgacgtcggg cacccaaccc gccttcacct caaaccaccg
     1441 aagccgactc cggctccggc cgacgggcat cttcccgcca gagcgagatt gccagggcga
     1501 tggccccaca actcacggca atgtccgcga agttgaatgt aggccaccgg agcgcgccga
     1561 ttcccacgtc gaggaaatca accacccccc gggcactgcg cacccggtcg atgagattgc
     1621 caaccgcgcc acctgcgacg agtccgaggg cgagctggcg gaagcggtcg ccggaaggac
     1681 tactgcgcga catccgggcc aacacgaaca cggccacgag agccacggtg aagaagatcc
     1741 aacgggagta gggccccacg tgaagaccaa aggctgcgcc ctggttgtat accagccgga
     1801 gctggaacca gtcgccaaat accgagaccc ccggcgtacg cagcagcgtg gcctccgcga
     1861 tcaccttggt gaccaggtcg agaaccacgg tggccgcagc ggccagcacg aaaactcggc
     1921 ggtccgcgcc gggcgtcgcg gggtcagcgg cgtttgccat cttcttccct ctctttgcac
     1981 gtgatacaaa gccgcgcatg cggcagcgca tcgagccgct cgaaattgat ctcctgcccg
     2041 cactgctggc agtgaccgaa cttctccggg ctgccataga gccggcggag cgcctcgttg
     2101 acatgccaga ggtagcgccc ttcctgggaa gcgaagagga actgcttctc ccgttccatc
     2161 gcgtcggtcc cctggtcggc catgtggaag gaataggagg agagatcgcc atcagcggat
     2221 tgcagtgtcg cattgaagga ctcgtcgtag aaacccagct ccttcatgac gcgggcacgc
     2281 tcctccatga ggcgcttctc gagatgtgac aactgtttct tattcattac tcgtccatgg
     2341 ttgaggccga ctcagtcccg gccgtgctga tagcgtttca ctccaaccac cgcaccatac
     2401 ccgtcgatgt ccacccgctg ttccaggtcg gctgcgggcg cgcgggcacc cacctcgaga
     2461 ccccgggcca gcgtctcgcc ccggataaag ccggcatggg cgttcaccgc atcggcgaga
     2521 ggcggatcgc cgtcgatcca cagcgcgatc cggtcggtgt agagataccc agcctctttc
     2581 cggatgcgct gcacccgatt caccacttca cgggccagac cctcgcgtcg cagcgcgtcg
     2641 tcgaggtgcg gatccagggc gacgacaaaa gggccactgc tctgcaccag ccagtcgctc
     2701 gccacctccc gctccaccgc aacgtcctcc ggcatatagg tgaccggctc accctcgagc
     2761 tccaaagtcg ctgggcttcc gtcctccagg ctccggagct gtcccggggt cagactggcg
     2821 gtggccgcca ctaccgctgg cgtgcgcttc ccgtagcgct taccgagtgt ccgaaagttc
     2881 ggcttgggcc ggagccggac cagctcggta tcggaggcga cgacctggat gtccttcacg
     2941 ttcacctcgg cgcgaaggag ctcgagtaac tcgtcgagcg cggggccacg caccccggcc
     3001 ggcaccgcca cctgcatccg tcccagcggc tgccgcaccc ggatattgcg ctcctcgcgg
     3061 gccgagcggg ccagcgaagc taaccgacgc accgcgtcca tggcagcttc cagctctggc
     3121 accctgagcc cgcgtggtac cggaaaccgt gccaggtgca cggatgttcc cgccagggcc
     3181 cgatggagcc agtcgctgag gaacggagcg gcgggtgcca ggagccgggt cacggtggtc
     3241 agcgtctcat ggagcgtggc cagggctgcg ggatccggca ccgcgtccgg agcccagaag
     3301 cgtggccggt tcaaccggac gtaccactgg gagacgtcgt caaccacgaa gtccatgatc
     3361 gcacgcaccc cggcggtcac gtcgtaccca ttccacgcgt tggtcaccgt ttccaccgtg
     3421 gcatccagtt ggctcagaag ccaccgatcc accagcgccc ggtcggccgg tgcgggggcg
     3481 gcttccggca accagtcacc ggcatacccg gcgaagaaca cgtagctgtt cttcaaggcg
     3541 ttgaagaact taccggccac gtccgggatg gttcgcggat cgaaccgctt cgggagccat
     3601 acctggctgg aggcaagaag gtatagccgg atcgtgtcgg cgccgaattc ccggatcatc
     3661 gtccaggggt ccaccacgtt gcccctgctc ttggacatct tctggccctc ggcgtcgaga
     3721 accagctcgt tcacgatcac gtgccggtag gcggtgctgt cgaaggccgc cgtcgcaatc
     3781 gccagaagcg agtagaacca gccgcgcgtc tggtccaccc cttcacagat gaagtcggcg
     3841 gggaaatggg cagcgaattc gtcctgatgc tcgaaggggt aatgccactg ggcgtagggc
     3901 atcgatccgg agtcgaacca agtgtcgatc acctccggcg tgcgccgcat tcggccaccg
     3961 cagtggcagg cccaggtgta ctcgtcgatg aacggtttgt gcggatcgaa tccctcgggc
     4021 agcgcgcggc cccagcgctc ggcgagctcg gcgtagcctc ccatgacctc gatatggctt
     4081 ggatcgtcct cgcagaccca caccggaagg ggcgtgcccc aatagcgttc ccgcgacaga
     4141 gcccagtcga cattgttttc cagccattcg ccaaagcgcc cggcgccgac ctcgggcgga
     4201 tgccagtcca cctcacggtt gagctccagc atccggtcct tcacggccga cgtgcggatg
     4261 aaccacgaat cacgcgcgta gtagatgagc gggctggagc agcgccaaca gtgcggatac
     4321 ttgtgggtat acggctgagt caaatgccag cgcccttcct gcttcaggcg ttggacgatg
     4381 cggtcgttgg tctcccgagc cgtgaccagt tgcccctcga tctcgggcca gtcggttccc
     4441 acgaaggtgc catcaggggc gaccggtcgg accagtgcca acccatgctc gattcctgcc
     4501 tggaagtcgt ctgccccgaa tgcaggggcc atgtgtacca aacccgagcc gtcttccgcc
     4561 gtcacgaagt cggcggcgat caccagtcga gaagttcgat cttccgggag tggcacgaca
     4621 tcgagcgggc gctggtagcg ttgaccgatc agttcgtgac cctggaaggt ccggatggcc
     4681 ccgagctcac tgaaactggg ggcgtcccgc tggggcccgc tggggagcga agcgcgcgcg
     4741 gtggcgagga tgagccggcg atcgcccacg gcatattcgc catactccat ttccggatgt
     4801 actgccacgg cgacgtttga tagcagggtc catggtgtcg tggtccacac caggagctgc
     4861 cgcttggggt cctgctccag cggaaacgtg acgtacaccg agttcgtggt gacgttttcg
     4921 taccccaacg caagctcgtg actggagagc accgttccgc atcggggaca
//
LOCUS       DASYRV010000012         2750 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3118157, whole genome shotgun sequence.
ACCESSION   DASYRV010000012 DASYRV010000000
VERSION     DASYRV010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2750
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3118157"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..233
                     /locus_tag="VGQ24_00240"
     CDS             <1..233
                     /locus_tag="VGQ24_00240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453290.1"
                     /translation="EAMEAARSTLGGAVAVALQLPQGLSAELLGTAREAFTQAFQLTA
                     AISAAVALMTAFLAMALLRSVRVGDRPAAIRG"
     gene            505..1662
                     /locus_tag="VGQ24_00245"
     CDS             505..1662
                     /locus_tag="VGQ24_00245"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HEV8453291.1"
                     /translation="MSVLRRIVTAGGGLAVALMAAPMIALQAQVVAPGTNPQAPTTNP
                     APTPTPTPSPAPTPSQAVDREMSNDLPFLREAAGANLLEIRLGQLALSKASNAAVKQF
                     GERMVTDHTRLAQELNSMVSRNGIALQAALSPAHSATINRLQNLSGQQFDQAYMSLMI
                     QDHQTDVSSFESQSRNADSPQVREFAARSLPVLQQHLTLAQQVGRQVNAEVATTTPQQ
                     AQSGAEAVRADRTFIKEIAADNFLEVTMARLADRKSQSSAVKQFAERIAADHNRIQDD
                     WLGMASKNGQPIKSGIGPNHRAKLNRLQKLSGRAFDRAYITTVVRDHRDYINYFEKEG
                     RAAHSTQVRDLVNRDLPTLRSHFNEAKQIGAQVGADTAATLRSERVSASRK"
     gene            complement(1751..2161)
                     /locus_tag="VGQ24_00250"
     CDS             complement(1751..2161)
                     /locus_tag="VGQ24_00250"
                     /inference="COORDINATES: protein motif:HMM:NF025210.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEV8453292.1"
                     /translation="MSPQRLVPLEVLNDRLAICRSDKNEPLPSWANAPAGEFFSATRT
                     RDELSIIIADSRASPEAECERGWRLLMVKGPLAFNLVGIIAGLSGTLAHAGVSIFALS
                     TYDTDYIMMKQPDLERALAALRQAGYPVSQPEQL"
     gene            2304..>2750
                     /locus_tag="VGQ24_00255"
     CDS             2304..>2750
                     /locus_tag="VGQ24_00255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEV8453293.1"
                     /translation="MGTDEIEGVLTFLRAAERLKTVMRSGWTSDGQQESVAEHTWRLC
                     LMAMLLYGHTSGIDLARLLKMCLIHDLGEAIGGDVPAPAQKAGVSKADQERKDLLQLV
                     ASLPPALRREIIELWDEYEAAGSPEAKVAKGLDKLETILQHNQGKNP"
BASE COUNT          536 a          863 c          896 g          455 t
ORIGIN      
        1 ccgaggcgat ggaggccgcg cggagcacac tcggtggcgc cgtggcggtc gcgctgcaac
       61 tcccccaggg gctcagcgcc gagctgctcg ggacggcgcg tgaagccttc actcaagcct
      121 tccagttgac cgcggccatc agtgccgcgg ttgcgctgat gaccgccttc ctggcaatgg
      181 ctctgctgcg aagtgtccgg gtcggcgatc gaccggccgc catccggggc tgagtcccct
      241 tcatgggaca cctgtctacg ctcatcccag tacccggcca gctcatcacc gcatcctaag
      301 attcagccac ataaatgctt gaccagctca tggccgatgg cccgagtatt gccttgtcca
      361 gggccttccg ccgggcacga agcctgtgct cgcggtcaca tcatccaggt ggcaataccg
      421 ctatggtcac ctgatggtaa cccaagattt cgccgacggc gcggcatgaa atgccgagtc
      481 tcgagcatag gaaaggaagg tcgtatgtcg gtactcagac gcatcgtcac cgccggaggt
      541 gggctggccg tggctctcat ggccgcgccg atgatcgcgc tgcaggcgca agtcgtggcg
      601 ccagggacga atcctcaggc cccgacaacc aatccagccc ccacgcccac ccccacgccc
      661 agccccgccc ccacgcccag tcaggccgtg gaccgggaaa tgagcaacga tttgccgttc
      721 ttgcgtgagg ctgccggcgc caatctcctg gaaatccgcc tcggccagct ggccctgagc
      781 aaggcgagca acgcggcggt gaagcagttc ggggagcgga tggtgacgga tcacaccagg
      841 ctggcacagg agttgaactc gatggtgtcg aggaacggaa tcgcgctgca ggcggctctc
      901 agcccggcgc actccgcgac aataaatcgg ctccagaatc tctccgggca gcagtttgat
      961 caggcctaca tgagcctgat gatccaggac catcagacgg acgtgagcag cttcgagagt
     1021 cagagtcgaa acgcggattc gccccaggtg cgggaattcg ccgccaggag cttgccggtc
     1081 ctgcagcagc acctcactct tgcccagcag gtgggtcgtc aggtgaacgc cgaggtagcc
     1141 accaccactc ctcagcaggc ccagagcggg gcggaggccg tgcgggcgga ccgcacgttc
     1201 atcaaggaga tcgccgccga caacttcttg gaagtgacca tggcgcggct ggcagacaga
     1261 aagtcgcaga gctccgcggt caagcagttc gccgagcgga tcgcggccga tcacaacagg
     1321 atacaagatg attggctagg gatggcttcg aagaatggcc agccaatcaa gtccggaatc
     1381 ggtccgaacc acagggcaaa gctgaaccgt ctccagaagc tgtccggacg ggcattcgac
     1441 cgggcctaca ttacgaccgt ggtgcgggat cacagggact acatcaatta cttcgagaag
     1501 gagggccggg cggcccactc gacccaggtg cgggacctgg tgaaccgcga cctgccgacc
     1561 ctgcggtcac atttcaacga ggccaagcag atcggtgctc aggtcggcgc ggacaccgcc
     1621 gcgacgctcc gtagtgagcg cgtgtcggcc agccggaagt aagatctccc ggtcatccac
     1681 agttctcagg ggcgccctcg cgggcgccct tctcttttcg agtgtcttcg gccttgtgcg
     1741 gctcctcctc tcacagttgc tcgggctggc tgaccggata ccctgcctgg cgcaatgccg
     1801 ccagcgcccg ctcgagatcg ggctgcttca tcatgatgta gtcggtgtcg taggtggata
     1861 gggcgaagat gctcacgccg gcatgggcca acgtgcccga cagcccggcg atgatgccga
     1921 ccaggttgaa agccaggggc cccttgacca tgaggagccg ccagccgcgc tcacactcgg
     1981 cttctggaga cgcgcgcgaa tcggcgatga tgatggagag ctcgtccctc gtgcgtgtgg
     2041 cagagaagaa ctcgccagcc ggcgcgttgg cccaactcgg cagcggttca ttcttatctg
     2101 agcgacagat ggcgaggcga tcgttcagca cctccagcgg caccagcctc tgcggggaca
     2161 tggcgctctc ttgagtctct cgaccaggag cattggagcg gcacgccgcc gccaggctgg
     2221 ctgtgccgat caccaagcac gaccagagaa atcgcggtcg catgggtata ctcctggcag
     2281 gggtcttagc tatggagccg ccgatgggga ccgacgagat cgaaggtgtc ttgacgtttc
     2341 tccgcgctgc cgagcggctc aaaacagtaa tgcgcagcgg gtggacgtca gacgggcagc
     2401 aggaaagtgt ggcagagcac acctggcggc tctgcctgat ggcgatgctg ctctacggtc
     2461 acacttcggg tatcgacctc gcgcgcttgc tcaagatgtg tctcattcat gatcttggcg
     2521 aggccatcgg gggagacgtg ccggcgccgg cgcagaaggc gggagtgagc aaggccgatc
     2581 aggaacggaa ggacctgctg cagctggtcg cttcgctgcc accggccctg cggcgggaga
     2641 tcatcgagct gtgggacgag tacgaggcgg ccggatctcc cgaggcgaag gtagccaagg
     2701 gattggacaa gctggagacg atcctgcaac acaatcaggg gaagaatccg
//
LOCUS       DASYRV010000013         3989 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3535117, whole genome shotgun sequence.
ACCESSION   DASYRV010000013 DASYRV010000000
VERSION     DASYRV010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3989)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3989)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3989
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3535117"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..278
                     /locus_tag="VGQ24_00260"
     CDS             <1..278
                     /locus_tag="VGQ24_00260"
                     /inference="COORDINATES: protein motif:HMM:NF014416.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453294.1"
                     /translation="ERIREELLHGKTVRLAIDEGFRHAMNAIIDSNVSTVLTALFLFQ
                     FGTGPVKGFAVTLILGIIASMITAVFVTRTFFMIWLQRRPAMSTLSI"
     gene            280..1263
                     /gene="secF"
                     /locus_tag="VGQ24_00265"
     CDS             280..1263
                     /gene="secF"
                     /locus_tag="VGQ24_00265"
                     /inference="COORDINATES: protein motif:HMM:TIGR00966.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HEV8453295.1"
                     /translation="MLRLFSNAKYDFIGVRRYAYGLTAAILLPGLIFLMIRGLNYSIE
                     FTGGTLLQVQSKKPVDVAQLRTGLDREGIHGAEIQNFGAENEYVIRARVAKPGSDAND
                     TQATAEAVRQALNAVLGPGNYTVLRTEAVGPKVGGELRQKAFLAIFLSFFAVLAYLAY
                     RFEWRFGLAAVVATAHDILATIAFIGILRLEVSLTVVAAVLSMVGYSLNDTIIIFDRV
                     RENLHKHKHESFEQILNRSINETLPRSVLTHGTTMASLIALTIFGGEVIRPFALVMLF
                     GVFTGTFSSIYIASPVLMAIEKRWPGPAARGHLVPKKAPPPASSRKPQTVG"
     gene            1373..2128
                     /locus_tag="VGQ24_00270"
     CDS             1373..2128
                     /locus_tag="VGQ24_00270"
                     /inference="COORDINATES: protein motif:HMM:TIGR00010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEV8453296.1"
                     /translation="MLIDTHCHLADSAFASDRPAVLDRAWAAGVERVVVIGESRANAE
                     AALTMAAAEPRILATAGVHPHEASAWSSDAETWLRERLADPRIVAVGEMGLDFHYDHS
                     SRADQHRAFEAQLRLAAEAGKPAVIHAREADEAVAAVLAAYPDVTAILHSFSSGMALL
                     RAGLVLRHYVSFSGMVTFKNWGLDDAIRETPADRLLLETDAPYLAPAPYRGKRNEPAF
                     VRHVAERVAVVRGMPVEELIAVTGENAARVFQF"
     gene            2162..3847
                     /locus_tag="VGQ24_00275"
     CDS             2162..3847
                     /locus_tag="VGQ24_00275"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004329 - formate-tetrahydrofolate ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HEV8453297.1"
                     /translation="MTATVTPVPSDIAIAQAAKLRPIADVAGEVGLGPDEILPYGRYK
                     AKISAEAIARRKPKGRLVLVTGINPTPAGEGKSTVTVGVSQALRRLGKKVVVCIREPS
                     LGPVFGVKGGAAGGGYAQVVPMDEINLHFTGDFHAITSAHNLLSAMLDNHLHQGNALG
                     LDPRRITWPRTLDMNDRALRSMVISLGGINAGPVREERFVIVPGSEIMAILALATDLA
                     DLETRIGRIIVGLTRDRKPVTAADLKASGAMTLLLKDAILPNLVQTLEGGPALVHCGP
                     FGNIAHGCNSIVATQLGLSLGEIVLTEAGFGADLGAEKFFDIKARFGKLNPEAAVVVA
                     TVRALKMHGGVKKDVLGKEDVAALKRGLVNLEGHVRNVQKFEVPVVVALNRFTSDTDE
                     ELKTVLDAAEGWGARAALSEVWAKGGAGGEAVARQILAVLDEKKAAFKPLYDAGRPIK
                     EKIETIARQIYGAGGVDYTAVAEKSITQCEAMGLGNTPVCIAKTQYSFSDDPTKLGRP
                     IGFRLTIRDVYPSAGAGFVVALAGDIMTMPGLPKVPAAESIRVLPDGTIEGLF"
     gene            3847..>3989
                     /locus_tag="VGQ24_00280"
     CDS             3847..>3989
                     /locus_tag="VGQ24_00280"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HEV8453298.1"
                     /translation="MPLEFISTAGAPKAIGPYSQAVISNGFLFTAGQVALDPAKGELV
                     SGG"
BASE COUNT          695 a         1300 c         1284 g          710 t
ORIGIN      
        1 tcgagcgcat tcgggaggag ctgctgcacg gcaagacggt ccggctcgcc atcgacgagg
       61 gcttccgtca cgcgatgaat gccatcatcg actccaacgt gagcaccgtg ctcacggcgc
      121 tcttcctgtt tcaattcggc accggaccgg tcaagggctt cgcggtcacc cttatcctgg
      181 gtatcatcgc ttccatgatt acggcggtct ttgtcacccg gacattcttc atgatctggt
      241 tgcagcgtcg gccggccatg tccaccctga gcatctgaca tgctgagact cttctccaat
      301 gccaagtatg acttcatcgg tgtccgccgc tacgcgtacg gactcaccgc ggccattctg
      361 ctgcccgggc tcatcttttt gatgatccgg gggctgaact acagcatcga gttcaccggc
      421 ggaaccctgc tccaggtcca gagcaagaag ccggtggatg tcgcgcagct ccgcaccggg
      481 ctcgaccgcg agggcatcca tggagcggaa attcagaact tcggggccga gaacgagtat
      541 gtcatccgcg cccgggtggc caagccggga agcgacgcca acgacactca ggccactgcc
      601 gaggcggttc gccaggcgct gaatgcagtg ctgggcccgg gcaactacac ggtactccga
      661 accgaagcag tcggtccgaa ggtcggcggt gagcttcggc agaaggcatt tcttgccatt
      721 ttcctctcct tcttcgcggt gctcgcgtac ctggcctacc gcttcgagtg gcgtttcggg
      781 ctcgcagccg tcgtcgccac ggcgcacgac atcctcgcca cgatcgcgtt catcgggatc
      841 ctgcgcctgg aggtgagcct cacggtagtg gcggcagtgc tgtcgatggt ggggtattcc
      901 ctcaacgaca cgatcatcat ctttgaccgg gtgcgggaaa acctgcacaa acacaagcac
      961 gagtcattcg agcagatcct gaaccgctcg atcaacgaga ccctcccgcg tagcgtgctg
     1021 actcacggca ccaccatggc gagtctcatc gcactcacca tcttcggtgg ggaagtcatc
     1081 cgcccgtttg ccctggtcat gttgttcggt gtctttaccg gaacattctc ctccatctac
     1141 atcgcctctc cggtgctgat ggcgatcgag aagcggtggc ccggccccgc cgctcgcggc
     1201 cacctggtgc ccaagaaggc cccgccaccg gcgtcgagtc ggaagccgca gacggtgggg
     1261 tgagaacgcg gggcagcggg gcagcggggc ggcggggcag taggcctgac gcctggaatt
     1321 gttccggcct cggaacaaac tgccctgctg cccatctgcc cagctgcccc gcttgctaat
     1381 cgacacccat tgccatctcg ccgattcagc cttcgcatct gaccggccgg cggtgctcga
     1441 ccgcgcctgg gccgcaggcg tcgagcgtgt ggtggtcatc ggagagtcgc gcgccaatgc
     1501 ggaagccgcg ctcaccatgg cggccgcaga gccacgtatc ctggcaaccg ctggggtgca
     1561 tccacacgag gccagcgcgt ggagctccga cgctgagacc tggctacggg agcggctggc
     1621 cgacccgcgg atcgtggccg tgggcgagat gggtctcgat ttccattacg atcactcttc
     1681 gcgagccgat caacatagag ccttcgaggc gcagctcagg ctcgcggccg aggccggcaa
     1741 gcccgccgtc atccacgcgc gggaggccga cgaggccgtt gctgccgtgc tcgccgccta
     1801 tcccgacgtc accgccatcc tccattcgtt cagcagcggc atggccctct tgcgagccgg
     1861 gctggtcctc cgccactatg tgtcgttcag cggcatggtc accttcaaga attggggcct
     1921 ggacgacgct attcgggaga cgccagcgga ccggctgctg ctggagaccg acgctcccta
     1981 tctcgcaccc gcgccctatc gtggaaagcg aaatgagccg gcctttgtcc gccatgtcgc
     2041 cgagcgcgta gcggttgtgc ggggtatgcc cgtcgaggag ctcatcgccg tgaccgggga
     2101 aaacgcggcc agggtgtttc aattttgact tcttacttct cacctcttac ctcagagacc
     2161 cgtgaccgct accgtaacgc cggtcccgtc cgacatcgcg atcgcgcagg cagccaagct
     2221 ccggccgatc gccgatgtcg ccggtgaagt agggctcggt cccgatgaga ttctccccta
     2281 cgggcggtac aaggcaaaga tcagcgccga agccatcgcc cggcggaagc cgaagggtcg
     2341 cctggttctg gtcacgggca tcaaccccac gccggccggc gaaggcaaga gcaccgtgac
     2401 cgtaggggtc agtcaggcgc tgcgtcgcct gggcaagaaa gtcgtcgtgt gcattcggga
     2461 gccgagcctc gggccggtgt tcggggtgaa gggtggcgcg gcgggcgggg ggtacgccca
     2521 ggtggtgccg atggacgaga tcaatctcca cttcaccggc gacttccacg cgatcacctc
     2581 cgcgcataac ctgctctcgg ccatgctcga caaccacctg catcagggga atgctctcgg
     2641 gctcgacccg cggcggatca cctggccgcg gacgctcgac atgaacgacc gagcgcttcg
     2701 ctccatggtg atcagcctgg gcggcatcaa cgctggcccg gttcgcgagg agcggttcgt
     2761 catcgtgccc ggcagcgaga tcatggcgat tctggccctc gccaccgatc tggccgatct
     2821 ggagaccagg atcggccgca tcatcgtcgg cctcacccga gaccggaagc cggtcacggc
     2881 ggcggacctc aaggcgtctg gggccatgac gctgctgctc aaggacgcga tcctgcccaa
     2941 cctggtgcag accctcgagg gcggccccgc gctggtgcac tgtggcccgt tcggcaacat
     3001 cgcccacggc tgcaactcga tcgttgcgac ccagctcggc ctctccctgg gtgagatcgt
     3061 gctgaccgag gccgggttcg gcgccgacct cggcgcggag aagttcttcg acatcaaggc
     3121 ccgtttcggg aaactcaacc ccgaggcggc tgtcgtcgtc gccacggtgc gagcgctcaa
     3181 gatgcacggg ggggtgaaga aggatgtcct cgggaaggag gatgtcgccg ccctcaagcg
     3241 gggcctggtg aacctcgagg gccacgtcag gaacgtgcag aaattcgagg tccccgttgt
     3301 ggtcgcgctg aatcgtttca cgtccgatac cgacgaagag ctgaagacgg tacttgatgc
     3361 cgccgagggc tggggcgccc gggccgcgct gagcgaggta tgggccaaag gtggagcggg
     3421 cggggaggcg gtcgcacggc aaatccttgc cgtgctcgac gagaaaaagg ccgcgttcaa
     3481 gccgctgtac gacgcgggcc gacccatcaa ggagaagatc gagaccattg cccggcagat
     3541 ctatggagcc ggcggcgtag actatactgc cgttgccgag aagagcatca cgcagtgcga
     3601 agccatgggc ctggggaaca caccggtgtg catcgccaag acccagtact ccttttccga
     3661 cgatccaacc aagctggggc ggccaatcgg cttccgtctc accattcggg atgtctaccc
     3721 gtccgccggc gcaggattcg tcgtggccct cgcgggggat atcatgacga tgccgggatt
     3781 gcccaaggtg ccggctgccg agtcgatccg ggttctgccc gatggcacga tagagggtct
     3841 cttctgatgc cgctcgaatt catctcaacg gccggagcgc cgaaggccat cggtccctac
     3901 agccaggctg tgatctccaa cggattcctg ttcaccgccg gtcaggtggc gctcgatccc
     3961 gccaagggag agctggttag tggcgggat
//
LOCUS       DASYRV010000014         7072 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_212763, whole genome shotgun sequence.
ACCESSION   DASYRV010000014 DASYRV010000000
VERSION     DASYRV010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7072
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212763"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2178
                     /locus_tag="VGQ24_00285"
     CDS             <1..2178
                     /locus_tag="VGQ24_00285"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEV8453299.1"
                     /translation="VEARDWGYKSVIHPEDYQRLASEWAAHFATGEPIEDEARLRRSD
                     GQYRWFLHRAVPLRDERGNILKWYGTSTDIEDLKCAEKVLRDHARLLDLTHDTVFVRD
                     MSDAITYWNRGAEALYGWSRDEAVGKISHQLTQTILPAPLEEINEELLRTGRWEGELV
                     HTRRDGTQVVVASRWSLQRDELGRAAAILETNNDVTEQKRAEAELRASEGRYRHIFQS
                     AGVSLWEEDFSEVKAAIDELKAEGVSDFGEYLATHPDFVRQAISLVKIIDVNDTTLSL
                     LQARSKDELLVSLHRIFLPETQEAFADELIAIAEGRTTFEAETVLQTLTGKRLSVLFT
                     IAFPADSAPLDSVLVSMMDITERKRLDNELRRSQAYLIAAQEVGNTGSWGRRISTGEI
                     YWSEEVFRIFGVDPRTTTPHRNLLTQLWHADDREFADRTIDDAVREKRNYEMDVRIVR
                     PDGSIRYVHIRGQPVFAKTGETDEFIGVIMDITKRKRTERALRRARERALEARFAAVL
                     EERTRLARDIHDTLLQGFTGIALKLVAAINRVTGPVESVVALRDLVDLAQQTLTDARR
                     AVWDLRSPALAGGDFSAAVRTAAEDCVRGTTLELEYDIGGAARPVDPDVEAVVIRVAQ
                     EAITNVVKHADARTVRVRLSFETRRIRLSVIDDGRGFAVAPDFQAYGGHWGLLGMRER
                     ASQIHGKLSLRSTPGHGTEVVLLVPYASGHQSAAASAASSSAT"
     gene            complement(2351..2575)
                     /locus_tag="VGQ24_00290"
     CDS             complement(2351..2575)
                     /locus_tag="VGQ24_00290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453300.1"
                     /translation="MLIARLDLTWWGALLLLVLFTIQFLIPAESIRVVIAWIYLGLAL
                     LVLIGRRTSLRVLVHTGRKCAAHYLRRQIA"
     gene            complement(2678..2950)
                     /locus_tag="VGQ24_00295"
     CDS             complement(2678..2950)
                     /locus_tag="VGQ24_00295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453301.1"
                     /translation="MRLNQGMIPLVLSAAALTSPMMGCAGYRVVSEPYAHDYFVYDPY
                     VHDYYRWDLDEDRIYQRWEIETRRGHMDFPRRSPGEQRAYWSWRHR"
     gene            complement(2981..4807)
                     /locus_tag="VGQ24_00300"
     CDS             complement(2981..4807)
                     /locus_tag="VGQ24_00300"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEV8453302.1"
                     /translation="MITLSSVSRETRRAGLSGALAAAAILTLGCTSSDKRASGALSAT
                     AAACQTSGLTLPNGFCATVFADSIGHARHLAVSSNGTVYVNTWSGKYYGNDTPPAGGF
                     LVALRDTTGDGRADAIARFGDSVQSGGAGGTGIRLYHGALYAEANDKILRYALENGDI
                     TPTGKPEVVVQGLPLTGDHPMHPFAIDSSGGLYVDLGSATNACQIKNRIALSPGHRPC
                     TELRTRGGIWQYDAKRTGQRFSPRERYATGIRNGEGIAVDSSGHGIYSTQHGRDQLAE
                     NWPKLYPPVQGQNLPAEELLRLQQGADYGWPECYFDSAQTKLVLAPEYGGDGGKAVGP
                     CATKQGPVAYFPAHWAPNDLLFYSGNQFPSRYRGGAFIPFHGSWNRAPGPQGGYNVVF
                     VPFANGKPTGKYEVFADGFAGANKDPGQAAHRPSGLAVGPDGALYISDDAHGRIWRVA
                     YTGGSPMARARGGAAAPAQPPESVGPPEGTHPDAGAQPGGAPSPAPAAEKSPAAAPGV
                     SPAVFALGDSVYHGQAGSATCAGCHGANAKGTPLAPDLTDSKWIWGDGSLASITKIIR
                     QGVSAPKEHTGVMPPMGGAQLAPAQLAAVGAYVYSLSHSAGR"
     gene            5038..5628
                     /locus_tag="VGQ24_00305"
     CDS             5038..5628
                     /locus_tag="VGQ24_00305"
                     /inference="COORDINATES: protein motif:HMM:NF012436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HEV8453303.1"
                     /translation="MTTTLDVDTIIRQAGPVLYQHGHEVQPFGQLVKLPIALAESACK
                     QSVTNLNQLLADTMTLRDLYKKHHWQVLGHTFYQLHLLFDKHYEEQSKLVDQVAERIQ
                     LLGGVSIAMAADVAETTIIPRPPKGRESVPAQVSRLLHAHEIVLKEARTMARQAVENG
                     DDGTNDLIVSNIIRTNELEVWFVAEHVVDTPVVRAR"
     gene            5715..6071
                     /locus_tag="VGQ24_00310"
     CDS             5715..6071
                     /locus_tag="VGQ24_00310"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEV8453304.1"
                     /translation="MTDNDPRVRPRLGLIGLGAMGGRMARRLLAAGYDLTVHDRARER
                     ARPLEQDGAKFAPTPKRLAAAVNVVLSSLTAAQVCAVEHVRHNAQGDEDFSAVIRTAQ
                     QMAGLAEWTLGSEVLG"
     gene            6068..6583
                     /locus_tag="VGQ24_00315"
     CDS             6068..6583
                     /locus_tag="VGQ24_00315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453305.1"
                     /translation="MSGIAEERVGSPQPRRFRWADGVVVGLVAAIISTLILLLAGAVS
                     GRGLHILGDAGMAALPSAVREATGASASLSYLLSHTLLYLLAGVVALALASLADRLPP
                     LMTGLLLVIIIIELGFLVFTTQSQAAGRLDAVTWRSLLIAHAVGDVVFALGIVRAHPS
                     LRQALVRGYEW"
     gene            6602..>7072
                     /locus_tag="VGQ24_00320"
     CDS             6602..>7072
                     /locus_tag="VGQ24_00320"
                     /inference="COORDINATES: protein motif:HMM:NF021425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2127 domain-containing protein"
                     /protein_id="HEV8453306.1"
                     /translation="MNEASGSRSRADRGLRLIALFKFIKVVLLIAVGLGALQLLDPDI
                     TARAQRWTSAIATSWDRRFVQHLLAHAVGLSPERLEVLALGAFLYAALFATEGVGLWL
                     GLRWAEYLTAVATASFVPIELFEVLQRFTLLRVGALVLNVAAAAYLVYRLRRAPN"
BASE COUNT         1242 a         2241 c         2336 g         1253 t
ORIGIN      
        1 gtggaagcac gggactgggg ctataagtcc gtcattcatc ccgaggacta tcagcgtctg
       61 gcctctgagt gggccgcgca cttcgcgacc ggagaaccca tcgaagacga ggcccgcctc
      121 cggcgatcgg acgggcagta tcgctggttt ctgcaccgcg ccgtgccgct gcgggatgaa
      181 agaggaaaca ttctgaagtg gtacggcacc agcaccgaca tcgaggacct gaagtgcgcc
      241 gagaaggtgc tgcgcgacca cgcccggctc cttgacctca cccacgacac ggttttcgtc
      301 cgcgatatga gcgatgccat tacctattgg aatcgtggtg ccgaggcgct ctacggctgg
      361 agcagagacg aagccgtggg caagatctct caccagctga cgcagacgat ccttccggca
      421 cccctcgagg agatcaacga ggagttgctc cgcaccgggc gctgggaggg tgagctggtg
      481 cacaccaggc gtgacgggac ccaggttgtg gtggccagcc gttggtcatt gcagcgggac
      541 gagctggggc gagccgcagc gatcctggag accaacaacg atgtgaccga gcagaaacgg
      601 gcagaggcgg agctacgcgc cagcgaagga cgctatcggc acatcttcca atcggcgggg
      661 gtgtcgctct gggaagagga cttttccgag gtcaaggccg ctatcgatga gctgaaggcc
      721 gagggcgtca gcgactttgg cgagtatctc gccacccacc cggacttcgt ccggcaagcc
      781 atctcgctgg tgaagatcat cgacgtgaac gataccacgc tcagcctctt gcaagcccgg
      841 agcaaggatg agcttctggt ctcactccac agaatttttc tgccggagac acaggaagcg
      901 ttcgcggacg agctgatcgc tatcgctgaa gggcgcacca cattcgaagc cgagaccgtt
      961 ctgcagacgc tgacgggaaa gcggctgtcc gtgttgttca cgattgcctt cccggccgat
     1021 tcggctcctc tcgacagcgt cctggtgagc atgatggaca tcaccgagcg caagcggctc
     1081 gacaacgagc tgcgccgcag tcaagcgtat ctgatcgcgg cacaagaggt gggcaatacc
     1141 ggcagctggg gtcgccggat ctcgacggga gagatctact ggtcggaaga ggtctttcgc
     1201 attttcggtg tggatcccag gactactacc ccccatcgta atctgctgac ccagctctgg
     1261 catgccgacg atcgggaatt tgccgaccgg acgattgatg atgcggtgcg ggagaagcgc
     1321 aactatgaaa tggatgtccg catcgtgcgg cccgacggct cgatccgcta cgtgcacatc
     1381 cgaggtcagc cggtgttcgc caagaccggc gagacggatg aattcattgg cgtgatcatg
     1441 gacatcacaa agcgcaagcg cactgaacgc gcgctgcggc gcgcccggga gcgcgcgctc
     1501 gaggcccgct tcgccgccgt gctcgaggag cgcacccggc tggcgcgcga cattcacgac
     1561 acgctgctcc aagggttcac tgggatcgcc ctgaagttgg tcgccgccat caatcgggtc
     1621 accgggccgg tggagagcgt cgtcgccctg cgagatctag tcgatctggc gcaacagacg
     1681 ctgacggacg cccgccgcgc cgtgtgggac ctgcggtcgc cggccctggc aggtggcgac
     1741 ttctccgcgg cggtgcggac cgcggcggag gattgcgtgc ggggcaccac actggagctg
     1801 gagtacgaca ttggaggagc agcccggccg gtggatccgg acgtcgaggc cgtggtgatt
     1861 cgagtggcgc aggaggccat taccaacgtg gtcaagcacg cggacgcacg caccgtgcgg
     1921 gtaaggctct cgttcgagac ccgccgaatc cgcttgtccg tcatcgacga cggccgggga
     1981 ttcgccgtcg cacccgactt ccaggcctat gggggtcact ggggattgct ggggatgcgg
     2041 gagcgggcca gccagattca cggcaagctc tcccttcgca gcactcccgg ccacggtacc
     2101 gaggtcgtgc tcctggtccc gtatgcatcc ggtcatcaat cggctgccgc gagcgcggcg
     2161 tccagctccg ccacctgagc gcgccaggtg acaatggcgt tgcacgacgt cgtcagacat
     2221 cgaccttctc cgcaacctta gtccgactaa caggaaaacg cgaaagcacg aaagcacgaa
     2281 cactaaatga gcttttgtct ttcttcgtgt tttcgtcatt tcgtgttttc gtgattgctt
     2341 ttgctttggt ttatgctatc tggcgcctta ggtaatgcgc ggcgcatttg cggccggtgt
     2401 gaaccagcac gcgcaggctg gtccgccgcc cgatgagcac gaggagagcc aggccgagat
     2461 aaatccaggc aatgaccacc cgaatgctct ctgccggtat cagaaactgg atagtgaaga
     2521 gcaccagcag cagcaacgca ccccaccagg tcaggtcgag ccgggcaatc aacacgacag
     2581 caaaggcgga ctgcgccggc cgttcgttcg agatacctcg aaatccatct gatgtctctc
     2641 tgcttcaggt taagcccgtc attcctcttc cgaatagcta tctgtgacgc caactccagt
     2701 aggcgcgctg ctctccggga ctgcgtcggg ggaaatccat atgaccccga cgggtttcga
     2761 tctcccaccg ctggtaaatc ctgtcctcgt cgagatccca ccggtaatag tcgtgcacgt
     2821 agggatcata gacgaaatag tcgtgcgcgt agggctcaga gacgacacgg taacctgcac
     2881 agcccatcat cggtgatgta agcgcagccg cggagagcac cagcgggatc attccttgat
     2941 tcagccgcat ggccggtacc tcctctttcc cgctgcggcc tcagcggccg gcggaatggc
     3001 tcagtgaata gacgtatgct ccaaccgctg ccagctgcgc cggggcgagc tgagcgccgc
     3061 ccatgggggg catgacgcct gtgtgctcct tcggggcgga cactccctgg cgaatgatct
     3121 tggtgatact ggccaggctc ccgtcgcccc agatccattt gctatccgtc aagtctggcg
     3181 cgagcggagt gcctttggca ttggcgccgt gacacccggc acacgtggcg ctgcctgcct
     3241 ggccgtgata gacgctgtct cccaacgcaa acacggccgg cgaaacgccg ggagcggccg
     3301 cgggcgactt ctccgcagca ggtgcgggag agggtgcgcc gccgggttgc gctccagcgt
     3361 cgggatgagt gccttccggc ggtccaacgg attccggggg ttgggcggga gcggcagcgc
     3421 cgccgcgagc ccgagccatg ggcgaaccgc cggtgtacgc gacccgccag atgcggccgt
     3481 gagcgtcatc cgagatgtag agggcgccgt cggggccgac tgcaagaccg ctcgggcggt
     3541 gagctgcctg ccccgggtcc ttgttcgcac cggcgaatcc atcggcgaac acttcgtact
     3601 tgccggtggg cttaccgttg gcgaagggga cgaagacgac attgtacccg ccctgagggc
     3661 ccggcgcccg attccacgag ccgtgaaacg ggatgaatgc accgccgcgg taccgcgagg
     3721 gaaactggtt gccactgtag aagagcagat cgttcggcgc ccagtgtgca ggaaagtacg
     3781 ccaccggccc ttgcttcgtc gcgcagggtc ccacggcttt cccgccgtct ccgccgtact
     3841 ctggggccag caccagcttt gtctgcgcgg agtcgaaata gcactccggc cagccgtagt
     3901 cagcgccctg ttgcagtcga agcagctctt ccgctggaag gttctggccc tgcaccggcg
     3961 ggtacagctt gggccagttt tcggcgagct ggtcccggcc gtgctgggtg ctatagatgc
     4021 catggccgct cgaatcgacg gcgatgccct ccccattccg aatgccggtg gcgtagcgct
     4081 cccgcggaga gaagcgctgc ccggtgcgct ttgcgtcgta ctgccagatg ccgccccggg
     4141 tccgaagctc ggtgcacggg cgatggccgg gtgagagggc gatccgattc ttgatttggc
     4201 acgcattggt agccgatccc agatcgacat acagcccgcc gctggagtcg atggcaaatg
     4261 ggtgcatcgg gtggtcgccg gtgagaggca ggccctgaac gacgacctcc ggcttgccgg
     4321 tcggcgtgat gtctccgttc tccagggcgt agcgcaggat cttgtcgttg gcctccgcgt
     4381 agagcgcacc gtggtagagc cgtatgccgg tccccccggc acccccactc tgcacgctgt
     4441 cgccgaaccg ggctatcgca tccgcccgac cgtccccggt cgtatcccgc agggcgacga
     4501 ggaagccgcc ggcggggggc gtgtcgttcc cgtaatactt tccactccag gtgttgacat
     4561 agaccgtgcc gttggagctg acggccagat ggcgggcgtg gccgatgctg tccgcgaaaa
     4621 cggtggcaca gaagccgttg ggcagtgtga ggccgctggt ttggcaggcc gcggcggtcg
     4681 cactcagagc cccgctcgcg cgcttatcgc tgctggtgca accgagggtg aggattgcag
     4741 ccgctgcgag cgctccggag agaccagccc ggcgtgtctc gcgtgacact gaggacagtg
     4801 tgatcatgtc tgctcctcga tcgattaagc aatggctctt cgcacccgca aaatatgtcg
     4861 gactccccat ccgcgacgct tgcacttcca tgctcccccg ttcggggagt gggcaggagc
     4921 acacggctcg gtcccgtccc ccgatccggg gagcaccgcc atccaagcgc cgcgccgcga
     4981 aaacggcaat ttggcaccag gcacaggtac ccaatcactc tcgaggagac ccggcagatg
     5041 accaccaccc tggacgtcga caccatcatt cggcaggcgg gccccgtact ctatcagcac
     5101 ggccatgagg tccagccatt tgggcagctc gtgaagctcc cgatcgccct ggcggagtcc
     5161 gcctgcaagc agagtgtcac caatctcaac cagctgctcg cggacaccat gacgctgcgg
     5221 gatctctaca agaagcatca ctggcaagtg ctgggacaca ccttctacca gctgcatttg
     5281 ttgttcgaca agcattacga ggaacagagc aagctcgtgg atcaggttgc agagcggatc
     5341 cagctgctcg ggggagtgag catcgcgatg gccgcggacg tcgccgagac gacgatcatt
     5401 ccccggccac ccaaggggcg cgagtcggtg ccggcgcagg tctcgaggct gctccatgcg
     5461 cacgagatcg tgctcaagga ggctcgaacc atggcccgac aggcagtgga gaatggggac
     5521 gacgggacca acgatctgat cgtgagcaac atcatccgca ccaacgagct ggaagtctgg
     5581 ttcgtcgccg agcacgtggt ggacaccccg gtagtgcggg cgagataggc ttcgctgctc
     5641 ccgccgacag gactccccgg tcgggggagc atcggggtgc aagcgccgcc ccctcgggtg
     5701 agtgaccttg tggcatgact gacaacgatc ctcgagtccg gccgcgtctg gggttgattg
     5761 gcctgggggc catggggggc cgaatggccc ggcggctgct tgccgccgga tacgatctga
     5821 cggtgcatga ccgcgcccgc gagcgggcac gtcccctgga gcaagacggc gcgaagttcg
     5881 ccccaacgcc gaagcggctc gcggccgccg tgaacgtggt actctcgagt ctcactgccg
     5941 cgcaggtatg tgccgtcgag cacgtccggc acaacgctca gggagacgag gacttctccg
     6001 cggtcatccg cacggcgcaa caaatggctg ggctggccga gtggacgctg ggaagcgagg
     6061 tgctcgggtg agcgggatag cggaggagcg cgtcggctcc ccccagcctc gccgcttccg
     6121 atgggcggac ggagtggtcg tcgggcttgt tgccgcgatc atcagcaccc tgatcctgct
     6181 cctcgccggc gccgtgagcg gccgcgggtt gcatatcctg ggggacgccg gcatggcagc
     6241 gctaccctct gcagtgcggg aggcaaccgg cgcctcggcg tcgctgagtt acctcctcag
     6301 ccatacactg ctgtacctgc tcgccggggt agtggccctg gcattggcga gtttggccga
     6361 tcggctcccg ccactgatga ccggccttct cctggtcatc atcatcatcg agcttggctt
     6421 cctggtgttc accactcaaa gccaggcagc cggacggctg gacgcagtga cctggcgctc
     6481 cctgctgatc gcgcacgcgg ttggcgacgt cgtctttgcg ctcgggatcg tgcgagcgca
     6541 tccgagtctg cgccaggccc tggtccgcgg atacgaatgg tgagcgcggg cgtgccggat
     6601 cgtgaatgag gcgtccgggt cacggagtag ggcggaccgc ggcctccggc tcatagcgct
     6661 gttcaagttc atcaaggtgg tgctgctgat agccgtcggc ctgggtgcac tccagctcct
     6721 cgaccccgac atcacggcgc gcgcgcagcg ctggaccagc gccattgcca ccagttggga
     6781 tcgccgattc gtccagcacc tcctggccca tgccgtgggc ctgtcacccg agcgactgga
     6841 ggtcctggct ctgggagcgt tcctatacgc cgcgttgttc gccaccgagg gcgtgggcct
     6901 ctggctgggg ctgcgctggg ccgagtacct gactgccgtg gccacggcgt cgttcgtgcc
     6961 gatcgagctc ttcgaagtct tgcagcgctt cactctgctg cgcgtgggag ccctggtgtt
     7021 gaacgtcgct gcggcggctt acctggtata ccgcctgcgc cgggccccaa ac
//
LOCUS       DASYRV010000015         2709 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_5483, whole genome shotgun sequence.
ACCESSION   DASYRV010000015 DASYRV010000000
VERSION     DASYRV010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2709
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5483"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1093
                     /locus_tag="VGQ24_00325"
     CDS             <1..1093
                     /locus_tag="VGQ24_00325"
                     /inference="COORDINATES: protein motif:HMM:NF024754.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEV8453307.1"
                     /translation="GAISFYERREVKDLLAYLRLVANPADDEAFLRAVGVPRRGLGET
                     SLALLGQVASKWGKPLLETAAIADRVPDLRPNVREAFRNFALLIEAAAKLEHLSPADL
                     LEHLTRTINYEALLLAEGPEGADRWENVRELVASAANWSEEVPAEEGETTTPLERFLA
                     EAALLSSADTVVGQEEGVTLMTLHTAKGLEWPVVVLTGMENGLFPLARAEDQVDGLEE
                     ERRLCYVGLTRAKDKLYLTWARARRRGGELRPGMASRFLRAIPPGVIEERRTTSLWAP
                     DWGGAKERWNEARAGRSAVPPEEASQDTPRYVKGERVRHRRFGSGTIRGLTGAGRDLK
                     VSVVFDDEEVGIKQLLVAYAGLEREWESA"
     gene            1090..1389
                     /gene="gatC"
                     /locus_tag="VGQ24_00330"
     CDS             1090..1389
                     /gene="gatC"
                     /locus_tag="VGQ24_00330"
                     /inference="COORDINATES: protein motif:HMM:NF014716.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEV8453308.1"
                     /translation="MSIGLDEVLHVAKLAELAVKESEFRRLVEQMNRIVNYVATLDEV
                     PGDRIVEPFLAGPRSVMLREDVEAPVLLARPPAAMAPEFADGFFLVPRHGAMEDQ"
     gene            1386..>2709
                     /gene="gatA"
                     /locus_tag="VGQ24_00335"
     CDS             1386..>2709
                     /gene="gatA"
                     /locus_tag="VGQ24_00335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEV8453309.1"
                     /translation="MSGTNVGPQRLAGAPRGSGAATARETGVRLAEAEPLNAVLHWSQ
                     ELLDAEAARVDRMAIPGPLAAMPVALKDNIVTVEQPTTCASRILEGYVSPYNATVVER
                     LRGAGAMIAAKTNLDEFAMGSSTEHSAFGRVQHPLDPSRVPGGSSGGSAALVAAGVVP
                     AALGSETGGSVRQPASFCGVVGVKPSYGRVSRYGLVAFGSSLDCVSVFGRTVNDAARV
                     LTIISGPDPLDATTVDRAPMLVPKALPDLRGLTVGLPKEYFPADLDAGVAAALRRTTE
                     QIRQLGGEVRQVSLPNSAYAVPTYYIIAPAEAAANLARFDGARYGPRFAAEGDVRALY
                     RATRGKGFGAEVRRRILVGTYVLSAGYYSAYYGRAQAARLRIVADFQKVFDAGVDLLF
                     TPTTPTPAFKAGEKTEDPVAMYLADVFVCSMSLAGLPAMSLPVGRSEGL"
BASE COUNT          425 a          858 c          957 g          469 t
ORIGIN      
        1 cggagccatc agcttctacg aacggcggga ggtcaaggac ctgctggcat acctgcgcct
       61 cgtagccaac cccgccgatg acgaggcgtt ccttcgcgca gtcggggtgc cgcgccgtgg
      121 tctgggagag actagcctgg ccctcctggg ccaggtcgcg tccaagtggg ggaagccgct
      181 cctggagacc gcggccatcg ccgaccgcgt gcccgatctc cggcccaatg tccgagaggc
      241 gttccgcaat tttgccttgc ttatcgaggc cgcggccaaa ctggagcatc tctccccggc
      301 tgacctcctc gagcacctca ctcgcaccat caactacgag gccctcctcc ttgccgaggg
      361 gcccgagggt gccgaccggt gggaaaacgt gcgcgagctg gtggcgagcg ccgccaactg
      421 gtccgaggag gtgcctgcgg aggagggtga gaccaccacg ccgttggagc gctttctcgc
      481 cgaggctgca ctcctctcct ccgcggatac ggttgtcgga caggaggagg gtgttaccct
      541 catgaccctg catacggcca agggccttga gtggccggtc gtcgtgctga ctggaatgga
      601 gaacggcctg tttccgctgg cgcgggcgga agaccaggtc gatggcctcg aagaggaacg
      661 gcgtctctgc tacgtcgggc tcacccgggc caaggacaag ctctacctga cctgggctcg
      721 cgcccgccgg cgtggcggag aactgcggcc tggaatggcg tcgcggtttc ttcgtgccat
      781 acccccaggc gtcatcgagg agcgccgaac cacatcgctg tgggcgcccg actggggtgg
      841 agcgaaggaa cgatggaacg aggcaagggc tgggcgttcc gccgttccgc ccgaagaggc
      901 ttctcaggac actccgcgct acgtcaaggg cgagcgcgtc aggcaccgac gattcggcag
      961 tgggaccatc cgaggcctca cgggggccgg tcgtgatctc aaggtgtcgg tggtgttcga
     1021 tgacgaggag gtcggcatca aacaattgct ggttgcctat gccggtctgg aacgggaatg
     1081 ggagagcgca tgagcatcgg gctggatgaa gtcctccatg tggccaagct cgccgaactg
     1141 gcggtgaaag agagcgagtt tcgccgcctg gtcgagcaga tgaatcggat cgtgaactac
     1201 gtcgccacgc tcgatgaggt acccggtgac cggatcgtgg agccgttcct ggcgggaccg
     1261 cgatcggtaa tgctacgcga ggacgtggaa gcgccagtgc tcctcgcccg cccgccggcc
     1321 gcgatggcgc cggagtttgc cgatgggttt ttcctggtgc cgcggcatgg cgcgatggag
     1381 gatcagtgag cgggacgaat gtaggcccgc aacgccttgc gggcgcaccg cggggcagtg
     1441 gggccgcaac tgcgcgcgaa accggcgtac ggctggccga ggccgaaccc ttgaacgccg
     1501 tgttgcactg gtcccaggag ctgctggacg ccgaggcggc ccgggtcgat cgcatggcga
     1561 ttccgggacc tctggcggcg atgccggtgg cgctcaagga caacatcgtc acggtagagc
     1621 agccgaccac ctgcgcctcc cggatattgg aaggctacgt atcgccctac aacgcaaccg
     1681 tcgtcgagcg gctgcgcggg gccggtgcca tgatcgcggc caagactaac ctcgacgagt
     1741 ttgccatggg ttcgtccact gagcactcgg catttggacg ggtgcagcac cccttggacc
     1801 cgagcagggt cccgggtggc tcatccggcg gctcggccgc gctcgtggcg gccggagtgg
     1861 tgcctgctgc cttgggatct gagaccggtg gctcggtgcg ccagcctgcg agcttttgcg
     1921 gggttgtggg agtgaagcca agctatgggc gggtcagccg ctatggtctt gtcgccttcg
     1981 gctcctcgct cgattgcgtc tcggtttttg gccgcactgt gaatgacgcc gcccgggtcc
     2041 tgaccattat tagcggacca gaccccctcg atgccactac ggtcgaccgt gcccccatgc
     2101 tggtgcccaa ggctctgccc gacctccggg gtctgacggt gggacttccc aaggagtact
     2161 tccccgccga cctcgatgcg ggcgtggcgg ctgcgctccg ccgcaccacc gagcagatcc
     2221 ggcagctcgg tggagaggtc cgccaggtct cactgcccaa ctcggcctac gcggtgccga
     2281 cctactacat catcgccccg gccgaagccg cggcgaatct ggcgcgcttc gatggcgccc
     2341 gctacggccc ccggttcgcg gcggagggag acgtccgcgc gctctaccgg gccacccgtg
     2401 gcaaggggtt cggggcggag gtgcgccggc gcattctggt cggtacgtac gtgctgagtg
     2461 cgggttatta cagtgcctac tatgggcgcg cccaggcggc gcggctgaga atcgtcgcgg
     2521 atttccagaa ggtcttcgac gcgggcgtcg acttgctctt cacgccgacg acgcccaccc
     2581 cggcgttcaa ggcgggggag aagactgaag atccggtggc gatgtacctg gccgacgtgt
     2641 ttgtctgctc gatgagtctg gctgggcttc ccgcgatgag cctgccggtg ggacggagtg
     2701 agggcctgc
//
LOCUS       DASYRV010000016         9026 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1251246, whole genome shotgun sequence.
ACCESSION   DASYRV010000016 DASYRV010000000
VERSION     DASYRV010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9026
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1251246"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..477
                     /locus_tag="VGQ24_00340"
     CDS             <1..477
                     /locus_tag="VGQ24_00340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453310.1"
                     /translation="GLALATLTLYVAGTGRVLRTPVARPTAAVVAMLRADVRPGDVVV
                     VSAPYYEILLQYHAGQAGVSLPLRGFPEGIEAWWARQPFKGWGGPAVSEHQLASFIAR
                     LRQGEGDHAVWLVLFETRYYDPRQRLLAALREQARSVEPLLPQAASAGQRLYRIVL"
     gene            775..4443
                     /locus_tag="VGQ24_00345"
     CDS             775..4443
                     /locus_tag="VGQ24_00345"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEV8453311.1"
                     /translation="MAYLAKLAKRISNARTAACATLLALVACAQGESKDFLTPDPHQI
                     SPVPVALRIDPELSIVPANQPTQFTATGIASSGQNLPVTVIWSVVGGTITSAGLFTGD
                     HSGQFVIRAYLSTNPSLQDSARAAVWEQPSDVVEVIVSPDSTLIEPGEALKLEALAKL
                     VDGSLSQTEGMLWQANGGQVDGSGRFTANAVGDYVVSAQANNGVKGDSRILVRSRART
                     VTGFSVNPSAVTVASGQSQQFSATTSWSDGTSEPASFAIWSSTGGTISNGGLFTAGST
                     PGVFRVIGQEGNGSHADTALVTVQAPLVTALSLTPASVNLAPGATQRFQATATLSDGT
                     VRSFAMSWSATGGTINLNGDYTAGNKAGSYRVIAALPGTSLADTATVTIGDPTATLTG
                     IVLNPSSVSLAAGGSQHFSVAALWSDGSSTAPAITWSATGGSVAPTGLYAAGTAAGTY
                     LVIARASNGVADTSLVVITPAVLTGVSVNPASATVLAGSTQQFAAAGTWSNGGTATPT
                     VTWSAGGGTISSAGLYSADGSAGTYRVIATAQGGAPADTGLVTVTVLPPTLTGLLVSP
                     GSASLFPGGSRQFSVSGTMSDGSTVVPPVSWSATGGTISSSGLYTAGQNVGNYRVIAR
                     STSGSRADTSAVAIALAAPVLTSVVVSPATVSMQTAGTKQFSVSGTWSDGSTGTPSVV
                     WIATGGTITNGGLYSAGTVAGTYRVIATQVAGTKADTADVTVSAAPVLTGISVSPATL
                     SLAPGATQAFTATGTYSNGSTGSPSVTWSATGGTISSAGVYTAGSVAGTFRVIAVQQG
                     GSLADTSAVTINSATSTLTSLVLTPASVAMFSGGQQQFSATGQYSNGTSAPLAVNWSA
                     TGGAISAAGLYAAGGTAGSFRVVATDPLSGKADTSTVSISLAPPPGQYQVLVERDWNS
                     YPDKAGVGSQFYVEGGLHTQYPALPVSAFWDLVPDPIFGKVIRYNQDPALNLLKSDGT
                     PTGPGRIATHGVGLSRLGQPNASWWTAPPGTPFADGKTYTPTHVWVRQFFRADPLWTT
                     LGPGGNGDYKTMFLRYWNSAARHELHVGIQERGLLHTAGNPGLTLTASGTGPLHNVQN
                     IDQQYNIQGWPVVDLWPLVQGGGPYPKSPYKAPYGPGNGEWIEIVLHHKTIGNRLEAT
                     AYWRQYTVGGVVNPQPWKISDKYEVADPASGLGWVGLARYEMGVNRNAGYANVAHIYW
                     GPYEVVDGSVYPNPWNLP"
     gene            complement(4452..5825)
                     /locus_tag="VGQ24_00350"
     CDS             complement(4452..5825)
                     /locus_tag="VGQ24_00350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453312.1"
                     /translation="MGLVERLYESAPVWLQEAALSVYGLRLRLLRYGRGHARELERLR
                     RTQWLDHDALVALQQDSWNQIRQAAEATPLYQALWAGVRAPTELERLAELPVLCKDTL
                     RAAGRGAVNSRMASQRLLEIHTGGTTGSPLTVFCTRQALRRNYAFFSRLQEWAGLGER
                     PRTATFAGRPIVPITQQQPPYWRSNRPGNALLFSSYHLSPQTIPDYAKQLARYAPELI
                     DSYPSSLEPIARWLLVNQGIAIRPRAVVTSSETLTTEVRGMIEAAFGCRVFDYYGAAE
                     MAAFISQCEMGTYHPNPEFGVVEVLCEGRTARPGELGELVVTGFVNPTMPLIRFATGD
                     LAVPGEGPCACGRAFSVLQSIEGRRDDVLVTPEGRLVGRLDPIFKKVESIYETRVVQD
                     APDHVRVEVVPVGVLPARDADGLRKELEIRLGPAMRIDIVPVESIPRTQRGKFRSVVN
                     LVARSSS"
     gene            complement(5825..6586)
                     /locus_tag="VGQ24_00355"
     CDS             complement(5825..6586)
                     /locus_tag="VGQ24_00355"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF017522.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TylF/MycF/NovP-related O-methyltransferase"
                     /protein_id="HEV8453313.1"
                     /translation="MVPRIANPLHRQRLKLLYYIWGYAGLLGIKGLTLPERLRLFGEF
                     LRVDWNVLHAHLPSEIVQVTRALAERRARAGEVMVEAGCWQGGSSAKFSLVCRLLGYE
                     LWIHDSFQGVEVLSPQDQAKEWDFGGQYASGEERLRDHLDRFGALEVCRVRPGWFADT
                     LALAAVPRPVRAVWIDCDLGKGTLEVLRGVVPSLSDDGWIFSQDFHIEPVRRVLRDPE
                     IWREFGRGIPTIRVLGRYLASVRFSPPAPGRVRAV"
     gene            complement(6634..8535)
                     /gene="asnB"
                     /locus_tag="VGQ24_00360"
     CDS             complement(6634..8535)
                     /gene="asnB"
                     /locus_tag="VGQ24_00360"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HEV8453314.1"
                     /translation="MCGICGIAYRDATRSVDAARLERMRDSLVHRGPDGNGLRIDGPV
                     GLGHRRLSIIDVAGGAQPLSNETGSIWITYNGEVYNYLGLTAELIAKGHRFRTHSDTE
                     ALVHGYEEEGLGFLPRLNGMFAFALHDRRNGTIVLARDHFGIKPLYYTVTPEGLFFAS
                     EIKAILSALGRTPSVRRESLQEYLLFRYVAGENTFFEGIHRLPPGHAAVWEAGELRLT
                     PFWSLPPADSETSSLTSAASQLDELLDRSVEGQLMSEVPLGTFCSGGLDSGLVTAYAM
                     RHTSHRLKTFSVGFENPAWDESALAAETAGRFSTDHRNLTLQPGDFEALLSHLVWHHD
                     EPLSHPNSVPIYLLSQFAKLEVTVVLTGEGADEVFGGYPRYHIARLSALLDRAPVKAR
                     SLLRKSAGALGGHRGKRLQALLPYEGAEAALFNSVILQPDLVARLTDGPVHGALKSRR
                     ALLEQAFVPGDPVATLTRYDLRTYLVCLLDRMDRMTMAASLEGRVPFLDVPLVEWGLR
                     LSSRDKLRGLKTKAVVRRLAKRHLGPEVLKAPKSGFGVPLADWFRLPSFRSLLARLGD
                     PSHPATAYLDHRSVASLLAEHTAGRDHGEVLWQLANTYLWFEIFGSGSGEAPTPDAVP
                     VLRASQGYS"
BASE COUNT         1668 a         2877 c         2918 g         1563 t
ORIGIN      
        1 gggctcgcgc tggcgaccct gaccctttat gtggcgggaa ccggcagagt gctgcggacg
       61 ccggtcgcca ggccaactgc ggcggttgtc gcgatgctga gggcagacgt gcggccgggg
      121 gatgtggtgg tggtcagcgc cccctactat gagatcttgc tgcaatacca tgccggtcag
      181 gcgggagtgt ccctaccgct acgcgggttt ccggagggaa ttgaagcatg gtgggcgcgc
      241 caaccgttta agggctgggg cggacccgcc gtttcggagc accagctagc gagcttcatc
      301 gcgagactga ggcagggaga gggcgaccac gcggtgtggc tcgtgctgtt cgaaacccgc
      361 tactacgatc cccggcaacg cctgctcgcg gcgttgcggg aacaggctcg atccgtagag
      421 ccactcctac ctcaagcagc ctccgcagga cagcggctct atcggattgt gctctagcgg
      481 tacccccgca tcgagaagct gaagcacact cggggtgcgc ctctgcaccc cgctgcagcc
      541 ctcatgcatt cctcgggtac cgaatcgttc ttattcaata caggcagctc cctgcgcgca
      601 ttatggagtc ttaggagttg gacttaaagt acttagtgac gggaagatag gcctcattag
      661 cggccgtatg atttctatac aaatttgtcg gcccgatgat tgccttagaa gggaccgtag
      721 gaagtcgtga cgcagttttc ccgccgcctc tgagcaaccc tgaagggttt ggtaatggcc
      781 tatctcgcga agctggccaa gcgcatctca aacgctcgaa ccgcggcctg tgccacgctc
      841 ctggccctgg tcgcttgtgc gcaaggcgaa tccaaagatt tcctcactcc agaccctcat
      901 cagattagtc ccgtcccagt cgccctccgg atcgatccgg agctctcgat cgttcctgcc
      961 aaccagccga cccaattcac cgcgaccggt atcgcttcca gcggacagaa cttgccggtc
     1021 actgtgatct ggagcgtggt aggaggcact atcaccagcg ctggtctctt taccggggat
     1081 cacagcgggc aattcgtaat cagggcatac ctcagcacca atcccagcct gcaggattcc
     1141 gcccgggcag ccgtctggga gcagccctcg gatgtggtcg aagtgatcgt ctcacccgac
     1201 tcgacgctga tcgagcccgg ggaggcgctc aagcttgaag ccctcgccaa gctggtggac
     1261 ggttcgctga gccagaccga gggcatgctc tggcaagcga atggggggca ggtggacggc
     1321 agcggccggt tcacggccaa tgccgtgggc gactacgtgg tgagcgccca ggcgaacaac
     1381 ggcgtcaagg gtgattccag gatcctggtc cggtcgcgag cccggactgt caccggtttc
     1441 agcgtgaacc cttccgcggt gacggtggcg agcggacaga gccagcagtt cagtgcgacc
     1501 accagctgga gcgacgggac gagcgagccg gccagtttcg ccatctggag ctcgacgggc
     1561 ggaacgatct cgaacggcgg cctcttcacc gcgggctcca cgcccggcgt cttccgggtg
     1621 attggccagg aggggaatgg tagccacgcc gacaccgcgc tggtgaccgt acaggccccg
     1681 ctggtgaccg cgcttagcct gaccccggcc agtgtgaacc tcgctcccgg agccacccag
     1741 cgcttccagg ccacggcgac gctctcggat ggaaccgtcc ggtcgtttgc aatgagctgg
     1801 tccgcaaccg gcgggacgat caacctgaac ggtgattata ccgccgggaa caaggccggc
     1861 agctatcggg tgatcgcggc cctgccgggg acctcgctgg cggacacggc gacggtgacg
     1921 attggggacc cgacggcgac tctgactggg atcgtcctca atccctcgag cgtgtccctt
     1981 gctgcagggg gatcgcaaca tttctcggtc gcggccttgt ggagtgatgg cagctcgacg
     2041 gcccccgcca tcacctggag cgcgacgggt ggcagcgtgg ctccgacggg gttgtatgct
     2101 gccggcacgg cggccgggac gtatctggtc atcgcgcgcg cttccaacgg agtcgctgac
     2161 accagtctgg ttgtgattac ccccgcggtg ctgaccggcg tcagtgtgaa tcccgccagc
     2221 gccacggtac tcgctggctc gacgcagcaa tttgcagcag caggaacgtg gagcaacggc
     2281 ggtacggcga ccccgaccgt gacctggagc gccggaggcg gaaccatctc gagcgcggga
     2341 ctctatagcg cggatggtag cgccggcacg taccgggtga ttgcaactgc acagggcgga
     2401 gcgcccgccg acacgggttt ggtcaccgtc acggtactgc ctccgacact gacaggtctg
     2461 ctcgtttcgc ctgggtccgc cagcctgttt cccggcggta gccgccagtt cagcgtgagc
     2521 ggaaccatgt ccgacgggag cacggtcgtg ccgccggtca gctggagtgc cacgggcggg
     2581 actatctcga gctccgggct ctataccgca ggccagaatg tcgggaacta tcgcgtcatc
     2641 gcccgctcta ccagcgggtc gcgcgcggac acctcagccg ttgccatcgc gctggcggcg
     2701 ccggtactca cctccgtcgt agtttctcct gcgaccgtgt cgatgcagac ggccgggacg
     2761 aaacaattca gtgtatccgg cacctggtcc gacgggagta cgggtacacc ttcggtcgtc
     2821 tggatcgcta ccggcggcac gatcaccaat ggtggactct attcggccgg gaccgtcgct
     2881 gggacctatc gcgttattgc gactcaagtc gccggcacca aggcggacac ggcggatgtg
     2941 acggtcagcg cggcgcccgt cctgaccggg atctccgtaa gccctgccac gctgagcctg
     3001 gcgccaggcg cgactcaagc cttcacggcc accggcacct actcgaatgg gagcaccggc
     3061 agcccgagcg tcacgtggag tgcgaccggt ggcacgatca gcagcgcggg tgtctacacc
     3121 gccggctcgg ttgcgggcac gttccgggtg attgcggtcc agcagggtgg ctccctggcg
     3181 gatacgtcgg ccgtgaccat caacagcgca acgtcgacgc ttaccagcct cgtgctgacc
     3241 cccgcatcag tggcaatgtt ctccggaggg cagcagcaat tcagcgcgac tgggcaatac
     3301 agcaatggga ccagtgctcc gctcgctgtc aactggtcgg cgacgggtgg agcgatatct
     3361 gccgccggac tgtatgccgc cggcgggacg gccggctcct tccgggtcgt cgcgaccgat
     3421 cccttgagcg gcaaggccga tacgagcaca gtcagcatca gcctcgctcc tccgccgggg
     3481 cagtaccagg tgctggtgga gcgggactgg aacagctatc ccgacaaggc gggcgtgggg
     3541 agtcagtttt acgtggaggg cgggctgcac acccagtacc ccgcgctgcc ggtgagcgcg
     3601 ttctgggatc tggtgccgga cccgatcttc gggaaggtga tccgctacaa tcaggacccg
     3661 gcgctcaact tgctcaagtc ggatggcacc cccaccggcc ccggccggat tgccacccac
     3721 ggtgtcgggc tcagtcgcct cggccagccg aacgcaagct ggtggaccgc gccgccggga
     3781 acgccgttcg cggatggtaa gacgtatact ccgacgcatg tctgggtgcg gcagttcttc
     3841 cgcgccgacc cgttgtggac cacgctcggg cccgggggca atggcgacta caagacgatg
     3901 ttcctgcgct actggaactc ggcggcgcgc cacgagctgc acgtcggcat ccaggagcgc
     3961 ggcctgctcc acacggcagg gaatcccggc ctcacgttga cggcgagcgg aacgggcccc
     4021 ctgcacaacg tccagaacat cgaccagcag tacaacatcc agggttggcc ggtggtggat
     4081 ctctggccac tggttcaagg cggcggcccc tatcccaaat cgccgtacaa ggccccctac
     4141 gggccgggca atggggagtg gatcgagatc gtgctgcacc acaagacgat cgggaaccgg
     4201 ctcgaggcca ccgcgtattg gcggcagtac accgtcggcg gggtggtgaa tccgcagccc
     4261 tggaagatca gcgacaagta cgaagtggcg gatccggcga gcgggttggg ctgggtcggg
     4321 ttggcgcgct atgaaatggg cgtgaaccgc aatgccgggt atgcgaatgt cgcgcacatc
     4381 tactgggggc cctacgaggt cgtcgatggc tccgtctacc cgaacccctg gaacctgccg
     4441 taaccgcgcg attagctgga ggaccgagcc accaggttca cgacggagcg aaacttcccg
     4501 cgctgggtgc ggggaatgga ctctaccggc acgatgtcta tccgcatggc tggacccagc
     4561 cggatctcga gctccttgcg gaggccgtcg gcatctcttg ccggtaggac acccaccggg
     4621 acaacctcga cgcgcacgtg gtcgggcgcg tcctggacga cgcgcgtttc gtagatcgat
     4681 tcgactttct tgaagatcgg atcgaggcgg cccaccagcc gtccttcggg agtgaccagt
     4741 acatcatccc ttcgaccctc gatactctgc agtaccgaaa acgcccgtcc gcaggcgcag
     4801 ggtccctcgc cgggcacagc caagtcaccg gtagcgaagc ggatcagggg catcgtcgga
     4861 tttacgaagc cagtcaccac gagctctccc agctcaccgg gacgcgcggt ccgtccctcg
     4921 cagagaacct ctaccacgcc gaattccggg ttagggtggt aggtccccat ttcgcactgg
     4981 ctgatgaacg cggccatctc cgcggcaccg tagtaatcga acacgcggca accgaacgcc
     5041 gcctcgatca ttcctctcac ctcagtggtc agggtttcgg aagaggtgac cacggcccgc
     5101 ggtcggatcg ctatcccctg gttcacgagg agccagcggg cgatcggctc gaggctggac
     5161 gggtaactgt cgatgagctc cggcgcgtac cgggccagct gctttgcgta gtcggggatg
     5221 gtctggggcg acaggtggta ggatgaaaag agcagtgcat tgccaggccg gttcgagcgc
     5281 caatagggcg gctgttgttg ggtgatcggg acgatgggtc ggccggcgaa ggtcgcggta
     5341 cgcggacgct ctcccagccc cgcccattcc tgcaggcgcg aaaagaaggc atagtttcgc
     5401 cgcagtgcct gccgggtgca gaacacggtg aggggcgagc cggtagttcc tcccgtgtgg
     5461 atctcgagca ggcgctggct ggccattcgg gagttaaccg ccccccttcc cgccgcgcgc
     5521 agcgtgtcct tgcagagtac cggcagctca gcgagacgct cgagctctgt gggcgcacgc
     5581 acgcctgccc agagggcttg atagagcggc gtagcctctg cggcctggcg gatctggttc
     5641 caggagtctt gctggagcgc tacgagagcg tcgtggtcca gccactgggt ccgccggagt
     5701 cgctcgagct cgcgggcatg cccacgtcca taccgcaaaa gccggagacg gaggccatat
     5761 acgctcaggg cagcctcttg cagccaaacc ggtgcactct cgtagagtcg ttccaccagt
     5821 cccatcagac ggctctgacg cgccctggag caggggggga gaaccgcacg ctcgcgaggt
     5881 acctgccgag caccctgatc gtcggtattc cgcgcccgaa ttcccgccag atttcggggt
     5941 cccggaggac ccgacgtacc ggctcgatat gaaaatcctg gctgaagatc cacccgtcat
     6001 cgctgagcga gggaaccact ccgcgcagga cctcgagggt tcccttaccc aggtcgcagt
     6061 cgatccacac cgctcgaacg gggcgaggaa cggcagccag cgcgagcgta tcggcgaacc
     6121 agccgggtcg cacgcgacac acctccagag ctccaaaacg atcgagatga tccctcaggc
     6181 gttcctcgcc cgatgcatac tgtcccccga agtcccattc ttttgcctga tcctgcggag
     6241 acagcacctc aactccctgg aatgagtcgt gaatccagag ctcatagccg agcagccgac
     6301 agaccaagct gaacttggcc gagctgccac cttgccagca tcctgcctcg accatgactt
     6361 caccggcgcg agcgcgacgc tccgccagcg cccgggtcac ctgcacgatc tccgagggca
     6421 ggtgggcgtg aagcacgttc cagtcaacgc ggaggaactc accgaagagc cgaaggcgct
     6481 ctggaagcgt caggcccttg atgccgagga ggccggcata tccccagatg taatacagga
     6541 gcttcaggcg ctgacggtgc agcgggttgg cgattcgggg gaccacccat gcttcccacg
     6601 tgcgccgcaa gcgctcatgg agaccaagag cggtcacgag tagccctggc tggctcgaag
     6661 cacaggcacc gcatcgggtg tcggcgcttc gccacttccg ctcccgaaaa tctcgaacca
     6721 gagataggtg ttggccagct gccagagcac ttcaccatga tccctccccg ccgtgtgttc
     6781 ggcgagcagc gacgccaccg agcgatggtc gaggtatgca gtcgcggggt ggctcggatc
     6841 cccgaggcgc gccagcaacg aacgaaagct tggcagcctg aaccagtccg ccaggggcac
     6901 cccgaatccg gatttaggcg ccttcaagac ttccggtccc aggtgccgtt tggccaatcg
     6961 acgtacgacg gccttggtct taagtccccg cagtttatcc cgcgaggaga gtcggagtcc
     7021 ccactcgacc agggggacat ccaggaacgg caccctcccc tccaagctgg ccgccatggt
     7081 catacggtcc atgcggtcca agaggcaaac gagataggtt cggaggtcgt accgtgtgag
     7141 agtagcgacg ggatcgccgg gaacgaaggc ctgttccaaa agggctcggc gagacttcag
     7201 cgcgccatgg actggtccgt cggtcaggcg tgccacgaga tcgggctgca agatcaccga
     7261 attgaagagg gccgcctcgg caccctcata agggagcagc gcctggagtc tcttcccccg
     7321 gtgacctccc aaggctcccg ctgacttgcg gagcagcgaa cgggctttca cgggggcgcg
     7381 atcgagcaag gcgctcaacc gcgcgatgtg atagcgggga tagccgccaa agacctcatc
     7441 agctccttca ccggtcagga cgacggtgac ctctagcttc gcgaattgac tcaggaggta
     7501 gatgggaacg gaattgggat ggctcaacgg ctcatcgtga tgccacacca aatgcgagag
     7561 gagtgcctcg aaatctccgg gctgcaaggt caggttacgg tggtccgtgg agaatcgtcc
     7621 ggcggtttcc gctgccaatg ccgattcgtc ccaggcggga ttctcgaatc caacggagaa
     7681 ggtcttgagc cgatgcgagg tatgccgcat ggcataggca gttaccaggc ccgagtcgag
     7741 tcctccgctg cagaaggtcc caagcggcac ctcgctcatc agctggcctt cgaccgagcg
     7801 atccaatagc tcgtcaagct gcgacgctgc gctcgtcagg gatgaggttt ccgagtccgc
     7861 cgggggcagc gaccagaacg gtgtgagacg cagttctcca gcctcccaca cggccgcatg
     7921 gcctggcggc aaccgatgaa tgccctcgaa gaaggtgttt tcccccgcca catagcggaa
     7981 gagaaggtat tcctggaggc tttcgcggcg cactgaggga gtccgaccaa gtgcggacag
     8041 aatcgccttg atctccgagg caaaaaacag tccttcgggg gtgacggtgt aatagagcgg
     8101 cttgattcca aagtgatcgc gcgccaggac gatggttccg ttgcgacgat catgcagggc
     8161 aaaggcgaac atgccattca gccgtggcaa gaagccgagc ccttcctcct cgtacccatg
     8221 gactagcgct tcggtgtcgc tatgggttcg gaaacggtga cccttggcga tcagctccgc
     8281 ggtaagaccg agatagttgt acacctcgcc gttgtaggtg atccaaatcg agccggtctc
     8341 gttggacagg ggctgagcgc ctcccgccac atcgatgatg ctaagacgcc ggtgcccgag
     8401 accaacaggc ccgtcgatcc gaagcccatt cccgtccggg cctcgatgga cgagcgagtc
     8461 tcgcatccgc tccaggcgag cggcatcgac cgaccgagtg gcgtcgcgat aagcgatccc
     8521 gcagatgccg cacatcgcag ttgcttcctg ttgaatcggg gtcagggtga aacaagtata
     8581 aggcaagagt aatgcctgca gtttgccatg agttctttgc gctcggcagc actagcgcca
     8641 atgggacgag ttgggcaaat tgctggcctt ctcttaggac gatagggtat tggtgatcgc
     8701 gacctctggc cggggcctgt cccgcttctg cgtcctagcg acttccggtt tgattactgc
     8761 catcgcatgc cacgggggca acgagcttgc aggctcgacc cttcctccct catcgccacc
     8821 accacttcag cctggaccat ctgtcatcaa cgtgctgctg acgccggact cggttgcctt
     8881 gtctcccgtg ggcctgcagc aattcagcgt caccgcgcaa tacagcaacg ggacgagtgc
     8941 tccgatcgcc gtcaactggt cggcgacggg cggagcgata tctgccgccg gactgtatgc
     9001 cgccggcggg acggccggct ccttcc
//
LOCUS       DASYRV010000017         5471 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2287774, whole genome shotgun sequence.
ACCESSION   DASYRV010000017 DASYRV010000000
VERSION     DASYRV010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5471)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5471)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5471
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2287774"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..4256
                     /gene="rpoC"
                     /locus_tag="VGQ24_00365"
     CDS             <1..4256
                     /gene="rpoC"
                     /locus_tag="VGQ24_00365"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR02386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEV8453315.1"
                     /translation="DRCGVEVTLSKVRRERMGHIELSVPVAHIWFFKTLPSPMGNLIN
                     ITLRDLERVIYYSSYIVIDPGKQEVEENQLLDEDEYLTLRAKARDEGDTTFKADIGAP
                     AVRELLGRIDIRKLAEVLRSGVATETSQHRKKQMLKRLKIVDAFLSSGDSGDLANDPA
                     WMILDVIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLTKLIQHKAPEVILR
                     NEKRMLQEAVDALFDNGRRSKAIRGRGKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSG
                     RSVIVVGPELRLHQCGLPKAMAVELFKPFIIHKLVEKGIAETVKRAKKIVERESPEVY
                     EILEEIIQDHPVLLNRAPTLHRLGIQAFEPVLVEGKAIRIHPLVCAAFNADFDGDQMA
                     VHVPLSFEAQLEARLLMISSNNVLKPSDGRPVAEPSQDMVLGSYFLTKLPAGFEEELR
                     KAGAGKTEESRARLWSGCKHFGSLAELEMALLNGSVSYHTAICFWYIPPRESEDATPR
                     WLRTTVGRVLFNSILPRRVVAELGFRDELMKKKNLSELVLQSYRRAGLADTVTFLDRL
                     KDFGFRFATMGGVSIGIEDLEIPAEKAELLTEADARVKRFQRAYNTGQITFGERYNKV
                     IDAWTHANNDVAEAMINSMRVSRGGFNPVFMMFDSGSRGSRDQIRQLAGMRGLMAKPQ
                     KKLTGGIGEIIESPIKSNFREGLTVLEYFISTHGARKGLADTALKTADAGYLTRRLVD
                     VAQDVTVTEEDCGTILGLEIAALKEGEDIIEPLRERILGSVASEDVFDPHELDEDGDP
                     KLLVEAGKLIDEDISNAIDDAGIEKVKIRSVLTCEARRGICRMCYGRNLATMDMVDMG
                     EAVGILAAQSIGEPGTQLTLRTFHIGGTSSRIAEEAERRARSDGRVKYTEGLEWADVP
                     VEYEDGTKATIRVVLTREDESASDESKEGILVVDPKDPKRVLNRYPVPEGALLAVKEG
                     ELVTKGDNERRATILYTWDPYNDPSIIKADGELRWKDLVPGVTLREELDEGTGLRSLV
                     VMADPDRELHPSVLVYMPNRKDPQEYTLAEGSRVILGSPTDPVTRGMDIPDAANPWST
                     KFHVDERPINEAWPSKTKKESKDKTVFLSTPVKVTKGITVTKIPRQAYKTRDITGGLP
                     RIAELFEARRPKDPATISEVDGVVKFGEIKRGKREIFVYPETPAGAAEEVEPQLYEVP
                     AGKHLRVHEGDRVRAGDRLTEGPVNPHDILLIKGPRAVQEYLLNEVQEVYRLQGVRIS
                     DKHIGVIVRQMLQKVRVTEPGDTDFLEGETVDRLTFRDDNERVVKRKGAAAQAEPVLL
                     GITKASLTTQSFITAASFQETTRVLTDAAIRGAKDDLLGLKENIIIGHLIPAGSGIYR
                     YAEIDIEPPAGYEPPPPRIEEVPVAAPQLTAAGSLADEE"
     gene            complement(4361..5077)
                     /locus_tag="VGQ24_00370"
     CDS             complement(4361..5077)
                     /locus_tag="VGQ24_00370"
                     /inference="COORDINATES: protein motif:HMM:NF019247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1579 family protein"
                     /protein_id="HEV8453316.1"
                     /translation="MCPLQTDRSLGYPAVSRITPWSAGPTLVWIDETHAGSPCSAGVS
                     PNVRPFTVGGCMKRMFYVVGTCALVSGVGSEFAAAQAPQLPKPGPEHARLGYFVGKWN
                     AEGELKPGPMGPGGKFTSSDTCEWFEGRYSVICRSEGKMPMGPSKSLGILGYNTEEKV
                     YTYYGVENTSMTMASVPRGTLRGDTWTYTDEGMMAGKKVKTRVVIKELSPTSYTFRMD
                     MQGPDGKWAPMMESKNTKVN"
     gene            5110..5367
                     /locus_tag="VGQ24_00375"
     CDS             5110..5367
                     /locus_tag="VGQ24_00375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453317.1"
                     /translation="MWSRLLALPLLGALLACGASRKQEVAESPKVAKDTVVTTRTVVD
                     TTILTIDTTIAVDTTIAVDTTFGVDTTKIEGGRGEVVDTTE"
BASE COUNT         1076 a         1714 c         1804 g          877 t
ORIGIN      
        1 gcgatcgctg cggcgtcgag gtgacgctca gcaaggtacg gcgcgagcgc atgggccaca
       61 tcgagctcag cgtgccggtg gcacacatct ggttcttcaa gacgctgccg agcccgatgg
      121 gcaatctgat caacatcacg ctgcgagacc tcgagcgggt catctactac tcgagctaca
      181 tcgtgatcga tccgggcaag caggaggtcg aggaaaatca gctgctggac gaggacgagt
      241 acctgaccct ccgggccaag gcccgggacg agggggacac cacgttcaag gccgacatcg
      301 gcgcccctgc cgtccgggaa ctgctgggcc ggatcgacat ccggaagctg gcggaggtgc
      361 tgcgctccgg cgtggccacc gagaccagcc agcaccggaa gaagcagatg ctgaagcggc
      421 tcaagatcgt ggacgctttc ctgtcctcgg gcgactcggg agacttggcg aacgacccgg
      481 cctggatgat tctcgacgtc atcccggtga ttccgcccga cctgcggccg ctggtgccgc
      541 tggacggcgg gcgttttgcc acgtccgatc tcaatgacct gtatcgccgg gtgatcaacc
      601 ggaacaaccg gcttaccaag ctgatccaac acaaggcgcc ggaggtcatt cttcggaacg
      661 agaagcgaat gctccaggag gcggtggacg ccctgttcga caacggccgc cgctcgaagg
      721 cgatccgggg ccgggggaag cgaccgctca agagcctctc ggacatgctc aagggcaagc
      781 agggccggtt ccgccagaac ctgctcggca agcgggtgga ctactccggc cgttctgtca
      841 tcgtggtggg tccggagctc cggctccatc agtgcggcct gcccaaggcc atggcggtgg
      901 agctcttcaa gcccttcatc atccacaagc tggtggagaa gggcatcgcc gaaacagtga
      961 agcgggccaa gaagatcgtc gagcgggaga gcccggaggt gtacgagatc ctggaagaga
     1021 tcattcagga tcacccggta ctgctcaacc gcgcgccgac gctccaccgc ctgggcatcc
     1081 aggcattcga gccggtgctg gtcgagggca aggccatccg gattcacccg ctggtctgcg
     1141 cggcgttcaa cgccgacttc gacggcgacc agatggcggt gcacgtgccg ttgtcgttcg
     1201 aggcccagct ggaggcgcgc ctcctgatga tctcgtccaa caacgtgctc aagccgtcgg
     1261 acgggcgtcc ggtggccgag ccgtcacagg acatggtgct cggcagctac ttcctgacca
     1321 agctgccggc cggcttcgag gaggagctcc ggaaggcagg tgccggaaag acggaagagt
     1381 cgagagcccg gctctggagc ggctgcaagc acttcggcag cctggccgag ctggagatgg
     1441 cgctgctcaa tggaagcgtc agctatcaca cggccatctg cttctggtac atcccgccgc
     1501 gggagtcgga ggatgccaca ccacgctggc tccggaccac cgtaggccgg gtgctgttca
     1561 acagcatcct cccgcgtcgg gtcgtagcgg agctcggctt ccgcgacgag ctgatgaaga
     1621 agaagaacct ctcggagctg gtgctccaga gctatcgccg tgccggcctg gccgatacgg
     1681 tcacgttcct ggaccggctg aaggacttcg gcttccgctt tgccacgatg ggaggtgtgt
     1741 cgatcggcat cgaggacctc gagatcccgg ccgagaaggc cgagctgttg accgaggcgg
     1801 acgcgcgggt caagcggttc cagcgcgcgt ataacaccgg ccagatcacc ttcggcgagc
     1861 ggtacaacaa ggtgattgac gcctggaccc acgccaacaa cgacgtggcc gaggcgatga
     1921 tcaactcgat gcgggtctcc cgcggcggat tcaacccggt gttcatgatg ttcgactccg
     1981 ggtcacgggg cagccgcgac cagatccggc agcttgccgg catgcgcgga ctcatggcca
     2041 agccgcagaa gaagctcacg ggaggcatcg gcgagatcat tgaaagcccg atcaagtcga
     2101 acttccgcga gggactcacc gtgctcgagt acttcatctc gacccacggc gcccggaagg
     2161 gtctggccga caccgcgctg aagacggccg acgccggcta tctgacccgg cggctggtgg
     2221 acgtggcgca agacgtgacc gtgaccgagg aagattgcgg tacgattctc ggactcgaga
     2281 tcgcggcact caaggagggc gaggacatca tcgagccgct ccgcgagcgc atcctgggca
     2341 gcgtggccag cgaggacgtc ttcgatccgc acgagctgga cgaagatggc gaccccaagc
     2401 tcctggtcga ggcgggcaag ctgatcgacg aggacatctc gaacgcgatc gacgatgccg
     2461 ggatcgagaa ggtcaagatc cgctcggtcc tcacctgtga ggcccggcgc ggcatctgcc
     2521 ggatgtgtta tggccggaac ctggccacca tggacatggt ggacatgggt gaggcggttg
     2581 gaatcctggc cgcgcagtcg atcggcgagc caggtaccca gctcaccctg cggacattcc
     2641 acatcggcgg tacctcgtcc cgcatcgccg aagaggcgga gcggcgcgcg cggtcggacg
     2701 gcagggtcaa atacaccgaa ggtctggagt gggccgacgt gccggtggag tacgaagacg
     2761 gtaccaaggc caccatccgg gtcgtgctca cccgcgagga tgagtcggcg tcggatgaga
     2821 gcaaggaagg catcctggtg gtggatccca aggaccccaa gcgggtgctc aaccgctacc
     2881 cggttcccga gggcgccctt ctggcggtca aggaaggcga gctcgtcacc aagggcgaca
     2941 acgagcggcg ggccactatc ctgtacacct gggatccgta caacgacccg agcatcatca
     3001 aggccgacgg cgagctccgg tggaaggatc tggtgccagg cgtcacgctc cgcgaggagc
     3061 tggacgaggg cacgggcctg cgcagcctcg tggtcatggc cgatccggac cgcgagctcc
     3121 atccgagcgt gctggtctac atgccgaatc ggaaggaccc gcaggagtac accctggcgg
     3181 agggcagccg cgtcatcctg ggctcgccta ccgacccggt gacccgtggt atggacatcc
     3241 ccgatgccgc caacccgtgg agcaccaagt tccacgtgga cgagcggccg atcaacgagg
     3301 cgtggccgag caagaccaag aaggagagca aggacaagac ggtcttcctc agcacgccgg
     3361 tcaaggtgac caagggtatc acggtcacca agatcccgcg tcaggcgtac aagacccggg
     3421 acatcaccgg cggcctgccg cgtatcgccg agctgttcga ggcaaggcgc ccgaaggatc
     3481 cggccacgat ctcagaggtc gatggcgtgg tgaagttcgg cgagatcaag cgcgggaagc
     3541 gcgagatctt cgtctacccg gagaccccgg ccggagcggc ggaagaggtc gagccgcaac
     3601 tgtacgaggt accggccggc aaacacctcc gggtgcacga aggcgaccgg gtgcgggcgg
     3661 gcgaccgtct caccgagggt ccggtcaacc cgcacgacat cctgctcatc aagggtccgc
     3721 gtgcggtgca ggagtacctg ctcaacgagg tccaggaggt ctaccggctc cagggcgtcc
     3781 gcatcagcga caagcacatc ggcgtgatcg ttcgccagat gctgcagaag gtgcgggtga
     3841 ccgagccggg cgataccgac ttcctcgagg gcgaaacggt ggatcgcctc acgttccgcg
     3901 acgataacga gcgtgtcgtg aagcggaagg gtgccgccgc gcaggctgaa ccggtgctct
     3961 tgggcatcac caaggcgagt ctcacgaccc agtcgttcat cacggctgcg tccttccagg
     4021 agaccacccg ggtgctgacc gacgcggcta tccgcggggc caaggacgac ctcctcggtc
     4081 tcaaggagaa catcatcatc ggtcacctca tcccggctgg cagtggtatc taccggtacg
     4141 ccgagatcga tatcgagccg ccggcgggtt acgagccgcc gccgccgcgg atcgaggagg
     4201 tgccggtcgc cgcgccgcag ctcaccgcgg cagggtcgct ggcggacgaa gaataggcag
     4261 cggggccgcg cggggcggca gggcagaaaa aacggcgctc aggattactt cctgggcgcc
     4321 gttttcgttc ggcttctcac agcccccgcg gcctccgccg tcagttcacc ttggtgttct
     4381 tgctctccat catcggcgcc catttcccgt ccggtccctg catgtccatc cggaaggtgt
     4441 aggaggtagg ggagagctcc ttgatcacca cgcgcgtttt gaccttcttg ccagccatca
     4501 tgccttcatc tgtataggtc caggtatctc cccgcaaagt gccccgcggg acgctggcca
     4561 tcgtcatgct cgtgttttct acgccgtaat aggtgtagac cttctcctcg gtgttgtagc
     4621 ctaggatccc aagactcttg cttggtccca taggcatttt gccctccgag cgacagatca
     4681 cgctgtacct accctcgaac cactcgcaag tgtcggacga ggtaaacttt ccaccaggac
     4741 ccatcggacc gggcttcagc tcaccctccg cgttccattt tccgacgaaa tacccgagcc
     4801 gcgcgtgctc aggtcccggt ttgggtaatt gcggcgcctg ggccgcagcg aactccgagc
     4861 cgaccccaga gactagagca cacgtaccta ccacgtaaaa cattcgtttc atgcagcctc
     4921 caaccgtgaa cggtctcaca tttgggctca ccccggcaga acatgggcta ccggcgtggg
     4981 tttcgtcaat ccagacgagc gtcggaccgg cggaccatgg tgtgatcctg ctcacggcag
     5041 gataccccag gctacggtcg gtttggagag gacacatact cgtgtggctc taaacgagcg
     5101 gaggaagcaa tgtggtcgag actgctggct ctcccgctac tcggtgcctt gctggcatgc
     5161 ggggcgagcc gtaaacagga ggtcgccgag agccccaagg tcgcgaagga caccgtggtc
     5221 acgaccagaa cagtggtgga taccacgatc ctcacaatcg acacgacgat cgcggtagac
     5281 accacgatcg cggtagacac cacgtttggg gtagacacta cgaagatcga aggcggcagg
     5341 ggagaagtcg tggacacgac tgagtgagga ccctcgaata gctgcccccg cctttcgggt
     5401 gacggtggac gcaggagctc agcgcaaggc ttttacccca tcagcgccag cggaagagct
     5461 tgagcgcgag a
//
LOCUS       DASYRV010000018         4025 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1668251, whole genome shotgun sequence.
ACCESSION   DASYRV010000018 DASYRV010000000
VERSION     DASYRV010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4025
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1668251"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..524)
                     /locus_tag="VGQ24_00380"
     CDS             complement(<1..524)
                     /locus_tag="VGQ24_00380"
                     /inference="COORDINATES: protein motif:HMM:NF017541.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TROVE domain-containing protein"
                     /protein_id="HEV8453318.1"
                     /translation="MDFTRHFATRLRRLLTPQSEPIPGSAQVANSAAGYAWPVDRWAR
                     LDRFLILGSEGGTFYIGERQLTRENAQAVVECLAEDGPRVVRRILEVSLAGRAPKNDP
                     ALFALAIAAGLGDQPTRGLVWTALPQVARTGTHLFHWLQFVHAFRGWGRGVRRAVAGW
                     YTGKPAKDLAYQVL"
     gene            complement(751..870)
                     /locus_tag="VGQ24_00385"
     tRNA            complement(751..870)
                     /locus_tag="VGQ24_00385"
                     /product="tRNA-OTHER"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
     gene            complement(949..1266)
                     /locus_tag="VGQ24_00390"
     CDS             complement(949..1266)
                     /locus_tag="VGQ24_00390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453319.1"
                     /translation="MNSLREGSGPEAVEPDAGDYFIVSGDCGTWYVSTEMARFIESVL
                     DARPRARWVKFVDLAGSRVRLRTRQIEYICQCSAEQRASERAHSRALTRERKADRTWE
                     ENE"
     gene            complement(1458..2678)
                     /locus_tag="VGQ24_00395"
     CDS             complement(1458..2678)
                     /locus_tag="VGQ24_00395"
                     /inference="COORDINATES: protein motif:HMM:NF013319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008452 - RNA ligase activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HEV8453320.1"
                     /translation="MQIFGTHDDATRAQLAKVAERARKVALMADGHVGYVMPIGGVAG
                     YDNEVSVVGVGFDIACGNAAIRTDRTLADLGNTGNQVTRRLTNLADEISATLSFGVGR
                     KNQADDAPTDDPLFEDAAWGAVPPKHRQALQVKARQQLGTVGSGNHYVDVFADEVGAL
                     WVGVHFGSRGFGHTVASNFLALSQGASWGERVPETEVLLSLDQPLGHDYWALMELAGR
                     YAYAGREWVARKVVSILNGQEQELVHNHHNFAWKEQHDGEDLVVVRKGATPAFPGQMG
                     FIGGSMGDDAVIVRGTASNDSAVTEVQRAALFSTVHGAGRVMSRTAAAGKRHRKTGRV
                     LSEGRVTPEMMQSWIAEKGVVLRGGGLDESPHVYRRLPEVLAAQGPTIEVLHTLRPLI
                     VVMAGANEFDPYKD"
     gene            complement(2784..2856)
                     /locus_tag="VGQ24_00400"
     tRNA            complement(2784..2856)
                     /locus_tag="VGQ24_00400"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2821..2823),aa:Val,seq:cac)
     gene            complement(2864..2936)
                     /locus_tag="VGQ24_00405"
     tRNA            complement(2864..2936)
                     /locus_tag="VGQ24_00405"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2900..2902),aa:Gly,seq:tcc)
     gene            complement(3199..3271)
                     /locus_tag="VGQ24_00410"
     tRNA            complement(3199..3271)
                     /locus_tag="VGQ24_00410"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3236..3238),aa:Arg,seq:tcg)
     gene            complement(3279..3352)
                     /locus_tag="VGQ24_00415"
     tRNA            complement(3279..3352)
                     /locus_tag="VGQ24_00415"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3316..3318),aa:Arg,seq:ccg)
     gene            complement(3444..3528)
                     /locus_tag="VGQ24_00420"
     tRNA            complement(3444..3528)
                     /locus_tag="VGQ24_00420"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3493..3495),aa:Leu,seq:cag)
     gene            complement(3531..3719)
                     /locus_tag="VGQ24_00425"
     CDS             complement(3531..3719)
                     /locus_tag="VGQ24_00425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453321.1"
                     /translation="MLVRVQPDQCSAVVQWTRMAGFQPEDRGLSYVRFAASLFLAGLR
                     PAPALRAGRIESRRGYRR"
     gene            complement(3693..3765)
                     /locus_tag="VGQ24_00430"
     tRNA            complement(3693..3765)
                     /locus_tag="VGQ24_00430"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3730..3732),aa:Phe,seq:gaa)
     gene            complement(3844..3917)
                     /locus_tag="VGQ24_00435"
     tRNA            complement(3844..3917)
                     /locus_tag="VGQ24_00435"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3881..3883),aa:Glu,seq:ctc)
     gene            complement(3928..3998)
                     /locus_tag="VGQ24_00440"
     tRNA            complement(3928..3998)
                     /locus_tag="VGQ24_00440"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3964..3966),aa:Gln,seq:ttg)
BASE COUNT          676 a         1406 c         1253 g          690 t
ORIGIN      
        1 ttgaggacct ggtacgccag gtccttcgcc ggcttgccgg tgtaccagcc cgccaccgcc
       61 cggcgcacac cgcgtcccca gccccggaat gcgtgcacga actggagcca gtgaaacagg
      121 tgggttccgg tccgcgccac ctgcggcagc gcggtccaca cgaggcccct ggtcggctgg
      181 tcgcccagac cggccgcgat cgccagcgcg aacaatgccg ggtcgttctt cggggcacgg
      241 cccgccaggc tcacctcgag gatccggcga acgacccgcg gaccatcctc ggccagacac
      301 tcgaccacgg cctgggcgtt ctcccgggtg agctgccgct ccccgatgta gaacgtcccg
      361 ccctcgctcc ccagaatcag gaagcgatcg agccgggccc atcggtccac cggccaggca
      421 taacccgccg cggagttggc gacctgggcc gatcccggga tcggctcgct ctgcggcgtg
      481 agaagtcgcc gcagccgagt ggcgaagtgc ctggtgaagt ccatggtcgt gctcccttcc
      541 ctgaagatga accagcgcgc ggataagcca accgagctgg ggatagcggt gaaggcgata
      601 acccagtctc tcggacccgc gcggcacttg tctggatcag cacgaggtgc gtgcatcgaa
      661 cacgccttgg ccagataacc ctcgaccgtc ggcccgttgc cgggcgagtt gtggcgaggg
      721 aaccctcggc tgacccattt tttgttccag ggagaccggg tggattcgaa ccaccgaccg
      781 tcggtttcga taacccgctg cctgcggccc gtatcgggcg aatgttcggc aggggtagtc
      841 cgccgctcta ccggactgag ctacggtctc cttcatccat tgtcgccggg tgcggcagag
      901 cgtgggggag cctcgcgctc gcaagcccac gcccgccgtc cttccctctc attcgttctc
      961 ttcccacgtg cggtcggcct tccgctccct ggtcagcgct cgggagtgcg cccgctccga
     1021 cgcccgttgt tcggcgctgc actggcagat gtattcgatc tgccgggtgc ggagtcggac
     1081 ccgggatccg gcgaggtcga cgaacttgac ccaccgtgcc cggggcctgg catcgaggac
     1141 ggactcgatg aaacgggcca tctcggtgct cacgtaccag gtgccgcagt cgccggatac
     1201 gatgaagtag tcgccggcgt ccggttcgac cgcctcgggg ccggaccctt ccctgaggct
     1261 gttcatacat ctctccaaca gagcgagtta ggtctgggtg gcttcacctc gcttctcgcg
     1321 gccccaacgg ccgcaaattc gacaagacat gggacctcct ccttcccgtt gcatcgagtc
     1381 accgattgtc gtcacgacaa ccgacggatg catgtgtgtg tgcgtcgaga agccccgggg
     1441 ggagttgaac cctcgggtca gtccttgtac ggatcgaact cgttcgcgcc ggccatgacg
     1501 acgatgagcg gccggagcgt gtgcagaacc tcgatcgtgg ggccctgagc tgccaggacc
     1561 tccggcagcc ggcggtagac gtgcgggctc tcatcgagcc ctccgccccg gagcaccaca
     1621 cccttttcgg cgatccagga ctgcatcatt tcgggcgtga cgcggccctc actcaacacg
     1681 cggccggtct tccggtgccg cttgcccgcg gccgcggtcc ggctcatcac ccgtccggcc
     1741 ccatggacgg tggagaacag cgccgctcgc tgcacctcgg tcaccgccga atcgttcgac
     1801 gcggttcccc gcacgatcac cgcatcgtcg cccatcgagc caccgatgaa gcccatctgg
     1861 ccgggaaatg ccggggttgc ccccttccgg accaccacca ggtcctcgcc atcgtgctgc
     1921 tccttccagg cgaagttgtg gtggttgtgg accagctcct gctcctgacc gttcaggatc
     1981 gacaccacct tccgagccac ccactcccgt ccggcgtagg catagcggcc ggccagctcc
     2041 atcagggccc agtagtcgtg gccgagcggc tgatccagcg agagcagcac ctcggtctcc
     2101 ggcactcgct ccccccagct ggctccctgg ctcagcgcca ggaagttgga ggccaccgtg
     2161 tggccgaatc cgcggcttcc gaagtggacc cccacccaga gcgcgccaac ctcatcggcg
     2221 aacacgtcca cgtagtggtt gccgcttccc accgtgccga gctgctggcg ggccttcacc
     2281 tgcagggcct gccggtgctt gggcggcacc gcaccccagg ccgcgtcctc gaagagcgga
     2341 tcgtcggtgg gggcgtcatc agcctggttc ttccgaccca cgccgaagct cagcgtcgcg
     2401 gagatctcgt ccgcgaggtt ggtcagccgg cgggtcacct gatttccggt gttgcccagg
     2461 tcggccaaag tccggtcggt ccggatggcg gcgttcccgc aggcgatatc gaaccccacc
     2521 cccacgacag agacttcgtt gtcgtacccg gcgacgccac cgatcggcat cacgtatccc
     2581 acgtggccat ccgccatcag ggcgaccttt cgtgcccgct ccgccacctt ggcgagctgg
     2641 gcccgcgtgg cgtcgtcgtg cgttccgaag atctgcataa ggcctccaag gtgagaagtt
     2701 agtcaggcgt gcgaagagag gtgagaaatg gagcctcccc cgtgcgaagg gggcgctctg
     2761 ccgattgagc taccagccca aggtacgcgg agctgggctt gaaccagcga cctccggtat
     2821 gtgagaccgg cgctctccca gctgagctat ccgcgtacgc aagagcccca gaggggaatc
     2881 gaacccctgt tcccagcttg gaaggctggt gcctcgggcc actcggccac tggagcagat
     2941 agagcactcg gcgggattct ggcggcgcga cactctggcc ggctgagtta ggagtgcagt
     3001 ccgggaaacc gccatccccc gccggagagt cgaactccgc tctgcgggtt aagaatccgc
     3061 tgcatcacgc gccaatgctt gcggggagta ttccggcgag tctgacctaa ccgagcgttc
     3121 catgcgccgc gatggtaacg atccatcttc tcccgtttaa aagacgggtg catcaccctt
     3181 aatgcttgca gcgcgcagag ccccgtgaga gattcgaact ctcagccacc agatccgaag
     3241 tctggcgctc gtccacttga gcttccgggg catcatcatc cggtcggcgg gattcgaacc
     3301 cgcatcctcg ggcttcgggg gcccgcgctc catccgattg agccacgacc gatcaatgga
     3361 ccgtgcggga atcgaacccg ccccgagatg cttgcagggc atcatcactc gccagagctt
     3421 acccagccca tacatccact ccatgcccac gagaggactc gaacctctac ggccatcgct
     3481 ggccacggcg ttctgagcgc cgcgtgtctg ccattccacc acgcaggcaa ttatctgcgg
     3541 tagccccggc gggattcgat ccgtccggcc cgaagggccg gcgccgggcg aagcccggcg
     3601 aggaagagcg aggccgcgaa gcggacgtag ctcaatccgc gatcttccgg ttgaaagccg
     3661 gccatcctgg tccactggac gacggcgctg cattggtcgg gctggactcg aaccagcatc
     3721 gccctcggct tcagcgaggc gctctaccat tggagctacc gaccacgtcg gcccagcgaa
     3781 tcgaacgctg ctcgacgctg cttaacaggc agccgcactc ccagagtgcg agaccgactt
     3841 gcatacccca accgggattt gaacccgtga cctccgcgct gagaacgcgg catccttggc
     3901 cactggacga ccggggcgta ttggcagttg cgggcgtagg attcgaacct acgtaggagg
     3961 ttccaaagac ctccgtcctg ccgttggacg agcccgcagt tgcaacccca gggatcgaac
     4021 ctgga
//
LOCUS       DASYRV010000019         2674 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_6403, whole genome shotgun sequence.
ACCESSION   DASYRV010000019 DASYRV010000000
VERSION     DASYRV010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2674
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6403"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(178..1875)
                     /locus_tag="VGQ24_00445"
     CDS             complement(178..1875)
                     /locus_tag="VGQ24_00445"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HEV8453322.1"
                     /translation="MTSFPTKVARRDFLRAGASAGIALGLDPGVRWLVDPDQAVPEII
                     RNSGVRRGQAQHLTILHTSDIHGQLEVHDEFFWEDGRAVFKQRGGFATLRTLIDSIRK
                     EARGTVLLVDGGDTLHGSAVAALSEGRAIVPLINRLGYDLLLPGNWEVVYGKSAMLRD
                     FRMYSAAKVCANMFHADGQHLLFPPYQIFNLGGTRVGFIGYTDPFTGTRQSPDYSRGI
                     RFAPPEASLARYVKLLKEDRGCALVCVLSHLGLAQQLHLADQESARGVDYVLGGDTHE
                     RTREPLQGRFARVTEPGAFGSFIGRLDLVLENGRVTEESYRLLEVDPERYPADGEMRT
                     LVAAAKAPYQSQLSRVIGRTTTPLLRYYVLETPLDNLITDALFWRFRTDFVVSNGFRF
                     CPPLVPGPDGSAAITMEYLWSALPVDSDVKTAAVTGAQIRDWLERELENVFAEDAADR
                     FGGWFVRYKGMQVTFRIKAPTGTRVQEVAIGGRPLEPGKVYSMLACEREGDPDNVLCR
                     MKGVSKPRRRSVRLHEVLVEYLAKFSPVSPDIEGRAVALDAPGRLLSQVEGTSYRFR"
     gene            complement(1856..2305)
                     /locus_tag="VGQ24_00450"
     CDS             complement(1856..2305)
                     /locus_tag="VGQ24_00450"
                     /inference="COORDINATES: protein motif:HMM:NF016064.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6691 family protein"
                     /protein_id="HEV8453323.1"
                     /translation="MNATPEVSPNGRGTPYLRYLLLGTGFGFVLTKAEAISWFRIQEM
                     FRFQSFHMYGIMLSAVLVGMVSIQLIKRFRIRTFAGEPITIEPKLFSWGNVIGGTLFG
                     LGWALTGACPGPLYALVGAGVWVMAVALVAAIAGTWVYGLIRDKLPH"
     gene            complement(2305..>2674)
                     /locus_tag="VGQ24_00455"
     CDS             complement(2305..>2674)
                     /locus_tag="VGQ24_00455"
                     /inference="COORDINATES: protein motif:HMM:NF016064.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YeeE/YedE thiosulfate transporter family
                     protein"
                     /protein_id="HEV8453324.1"
                     /translation="ALAAGIVLGGVLGGLVFRNPNPVRISPATQADLQAFGIANQGGL
                     HPVELFNFPALLTPRGFILIVVGGFLVGFGTRYAGGCTSGHSIMGMSNLQWPSLVATC
                     CFFGGGLLMTWVLLPGILVL"
BASE COUNT          499 a          853 c          925 g          397 t
ORIGIN      
        1 actacgtggt cgagatcggc cactacagct accagggaac cagcaagccc ggcgccaagc
       61 cgcgtgcggc ctccggacgc tacatggtac tctggcggaa agatgccgat gggatctggc
      121 ggctgcaccg cgacatcggc agcgaggtgc cgcccaagcc ataggggcgt ccgccggtca
      181 gcgaaagcgg tagctggtgc cttcaacctg cgagaggagc cggcccggtg cgtcgagggc
      241 caccgcccga ccctcgatgt cgggcgagac cggcgagaat ttggcgagat actccaccag
      301 gacttcgtgc agcctgacag agcggcgccg cggcttggag acgcctttca tccggcagag
      361 cacgttgtcg gggtctccct cccgttcgca cgcgagcatc gagtagacct tcccgggctc
      421 gagcggccgg ccgccgatcg ccacctcctg cacccgcgtc ccggttggag ccttgatccg
      481 gaaggtgacc tgcatccctt tgtaccgcac gaaccagccg ccaaagcgat cggcggcgtc
      541 ttcggcaaag acgttttcga gctcgcgctc gagccagtcg cggatctggg ctccggtgac
      601 cgctgcggtc ttcacgtccg aatcgaccgg taaggcgctc cagaggtatt ccatggtgat
      661 cgcggcgctg ccgtccggac cgggcacgag cggcgggcag aagcggaacc cgttggacac
      721 gacgaagtcg gtccggaacc gccagaagag cgcgtcggtg atcagattgt ccagcggggt
      781 ctcgaggacg tagtagcgga gcagcggtgt ggtggtccgg ccgataaccc ggctcagctg
      841 cgactggtag ggcgccttgg ccgccgccac cagcgtgcgc atctcgccgt ccgccgggta
      901 ccgctcggga tcgacctcca gcagccgata actctcctcg gtgacccttc cgttctcgag
      961 gaccaagtcg agccttccga tgaaggaacc gaacgcaccc ggctccgtga cgcgagcgaa
     1021 gcgcccctgg agcggctcgc gggtccgctc gtgggtgtcg ccgccgagca cgtagtcgac
     1081 gccccgggcg gattcctggt cggcgagatg gagctgctgg gcgaggccga ggtgagacaa
     1141 gacacagacc agggcgcagc cccggtcctc tttcaggagc ttgacgtacc gggcgaggct
     1201 cgcttccggc ggggcgaagc gaatcccccg ggaatagtcg ggcgactggc gcgtgcccgt
     1261 gaacgggtca gtgtagccga tgaatccaac ccgggtgccg cccagattga agatctggta
     1321 gggcgggaac aagagatgct gcccgtcggc gtggaacata ttggcgcaga ctttggcggc
     1381 cgagtacatc cggaagtccc gcagcatcgc gctcttgccg tagacgacct cccagttgcc
     1441 gggcaggagc aggtcgtagc cgagccggtt gatgagcggc acgatcgccc gaccctccga
     1501 cagcgcggcc acggcgctcc cgtgcagggt atcgcctccg tccaccagga gcacggtgcc
     1561 gcgggcttct tttcgaatgg aatcgatcag ggtgcgcagg gtggcgaaac cgccgcgctg
     1621 cttgaacacc gcgcggccgt cctcccagaa gaactcatca tgcacctcga gctggccgtg
     1681 gatatcggag gtatggagga tcgtcaggtg ctgggcctgg ccccggcgga cgccggaatt
     1741 ccgtatgatc tcgggaacgg cttgatccgg gtcaaccaac cacctcaccc cggggtcgag
     1801 gccgagagcg atcccggccg aagcgccggc cctgaggaag tcgcggcgag cgaccttagt
     1861 ggggaagctt gtcacgaatc aatccgtaga cccaggtgcc cgcgatggct gcgacgagag
     1921 ccacggccat gacccagacg ccggctccga ccaaggcgta gagcggaccg ggacaggccc
     1981 cggtcagggc ccagcccagg ccgaacaggg tcccgccgat gacgttgccc cagctgaaca
     2041 gcttgggctc gatggtgatc ggctcgccgg cgaaggtccg gattctgaat cgcttgatga
     2101 gctgaatcga gaccatgccg accagcacgg cactcagcat gatgccatac atatggaagg
     2161 actgaaagcg gaacatctcc tggatacgaa accaggagat ggcttcggcc ttggtgagca
     2221 cgaagccgaa cccggttccg agcaggagat agcggaggta cggcgtgccg cggccgttcg
     2281 ggctcacttc cggggtcgcg ttcatcagag tacgaggatg ccgggcagca gcacccaggt
     2341 catcagaagc ccgccgccga agaagcagca ggtcgctacc agggagggcc attgcaggtt
     2401 ggacatgccc atgatcgaat gtccggaggt gcagccgccg gcgtaacggg tgccgaaccc
     2461 gaccaggaat cctccgacga cgatgaggat gaagcccctg ggggtgagca gcgcagggaa
     2521 gttgaagagc tcgaccgggt ggaggccgcc ctggttcgcg attccgaaag cctgcagatc
     2581 cgcctgggtg gcgggcgaga tgcgcacggg attggggttg cggaacacca gcccgccaag
     2641 cacgcccccg aggacgatgc cggccgcgag ggcc
//
LOCUS       DASYRV010000020         2532 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_422312, whole genome shotgun sequence.
ACCESSION   DASYRV010000020 DASYRV010000000
VERSION     DASYRV010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2532
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422312"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2063
                     /locus_tag="VGQ24_00460"
     CDS             <1..2063
                     /locus_tag="VGQ24_00460"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEV8453325.1"
                     /translation="RQSLQHLRTRLGPIVRGDRAVVELIGVVHCDVRDFREKVVQEPR
                     LALTTDIPRFLAGFSVRHAPQFDEWVAETRRGLLRQYQHALGTLAREAMGQWRWREAV
                     ELADRWLASDPLSDEAARLATEARYLSGDRGAALAGFAEYRARLQRETGCEPSRSLFN
                     LMRRVEADAAPINARPITDEWYARAPSFESNLIGRKEEWAALVKGWKAVRRGGGRIVL
                     LEGEPGVGKSRLAGEFVRWVVADGGSVLRGHGYDVRGGIPYEPIVELLRDALSAPGLA
                     GTAPEWLTEAARLLPEIRQRFPALPNPAVPADSAEGWRLFEGVAQLVLALAAERPVVI
                     LLDDLQWCDSDSCSLLRFLIRRTEPAPVLWLGTVSLGELERDAPAARLCRVLRAQSHA
                     SVVPLRPLTEEELWRMIREMGHVSTPTGARRFANRIFGVTAGNPFYVIELLKTMFAQG
                     LLAADEETGEWTASSELTEQGRELPVSQTVHDVIAERVERLPEQLCEVLVTIAVAGAG
                     CRTEVLSHVHGISRLHAAGVADALVDRRLVVEEGGVYRCAHPVIAHVVRDGLTASRRR
                     EVHRILALALERATPPAEIHEAAREIARHADRGGEPALAYRFALIAAQGAVERYAFAE
                     AMSWLDLAATNGRGVGETDAVNRLTANVLEAAGWSEAPPLAKLGSAITRELEREDFDL
                     PVRG"
     gene            2085..>2532
                     /locus_tag="VGQ24_00465"
     CDS             2085..>2532
                     /locus_tag="VGQ24_00465"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEV8453326.1"
                     /translation="MASLLDTLQAALGAAYVIERELGGGGMARVFLAAEPALGRQVVI
                     KVLPPELAETVSADRFQREIQVAAKLQHPHIVPLLTAGHANGLLYYIMPLVEGETLRG
                     RLAREGELPVAEACRILAEVARALSYAHKQGIVHRDIKPENILVSGG"
BASE COUNT          387 a          781 c          916 g          448 t
ORIGIN      
        1 tccgccagtc cctccagcat ctccgcacca ggttgggtcc gatcgttcga ggcgatcgcg
       61 ctgtcgtcga actgatcggg gttgttcact gcgacgtcag agacttccgc gagaaggtgg
      121 ttcaggagcc gcgccttgcc cttacgaccg acatccctcg ctttctcgcg gggttctcgg
      181 ttcgccatgc cccccaattc gacgagtggg ttgccgagac gaggcgcggg ctgctgcggc
      241 aatatcagca tgccctcggc accctggctc gcgaggcgat gggacagtgg cgttggcggg
      301 aggcggtcga gctcgccgat cggtggctcg ccagcgatcc gttatcggac gaagccgcac
      361 ggctcgcgac agaggcacgg tacctgtcgg gcgatagggg tgccgctctc gccgggtttg
      421 ccgagtaccg agccaggctt cagcgggaga ccggctgcga gccgagtcgg agcctgttca
      481 atctgatgcg ccgggtggag gccgacgcag ccccgattaa tgcccgtccg attaccgacg
      541 agtggtatgc cagggcaccg tcgttcgaat ccaatctcat cggccgaaag gaggaatggg
      601 cggccctggt gaagggttgg aaggcggtcc gccggggtgg aggacggatc gtgctgctcg
      661 agggcgagcc gggggttggc aagtcccgcc tggccggaga gttcgtccgg tgggtggtgg
      721 cggatggcgg gagtgtcctg cggggtcacg gatatgacgt ccgaggcggc atcccttatg
      781 agccgatcgt ggagctgctg cgcgacgcac tcagcgcgcc ggggctggcc gggaccgccc
      841 ccgagtggct taccgaggca gcccgccttc tcccggagat ccggcagcga ttccccgcgc
      901 tgcccaaccc cgcggtgccg gccgactcgg ctgagggatg gcgcctgttc gagggggtgg
      961 cccagctggt gcttgccctc gccgctgagc ggccggtggt gatcttgttg gatgaccttc
     1021 agtggtgcga cagcgacagc tgctccctcc ttcgtttcct catccggcgg acggaaccag
     1081 cgcccgtgct ctggttgggc acggtgagtc tgggcgagct ggagcgcgat gcccctgcgg
     1141 ctcgtctctg ccgggttctg cgggcccagt cgcacgcctc ggtagttccg ctgcgcccac
     1201 tcaccgagga agagctctgg cggatgattc gggaaatggg tcacgtcagc acacccaccg
     1261 gggcccgtcg ctttgccaac cgtatcttcg gcgtcaccgc cggtaatccg ttttacgtga
     1321 tcgaactgct gaagaccatg ttcgctcagg ggttgctcgc ggcagacgag gagaccggag
     1381 aatggaccgc gtcgtccgaa ctcacggagc aggggcgcga gctgccggtg tcgcaaacgg
     1441 ttcatgacgt catagccgag cgagtagagc ggctgcccga gcagttatgc gaggtactgg
     1501 tcacgatcgc agtggcgggt gcggggtgcc gtacggaggt gctgtctcat gtccacggca
     1561 tctcccgtct gcatgcggcc ggcgtggcgg acgcgctggt ggatcggcga ctcgtggtgg
     1621 aggagggcgg agtctaccgc tgcgctcacc cggtcattgc ccatgtggtt cgtgatggac
     1681 tcacggcctc gcggcggcgc gaggtccacc gcattctggc gctcgcgctg gagcgggcca
     1741 cgccgccagc ggagattcat gaggcggccc gcgagatcgc gcgtcatgcg gaccggggcg
     1801 gggaaccggc gctggcgtac cgtttcgcgc tgattgccgc gcaaggcgcg gtggagcgct
     1861 acgcctttgc cgaggccatg tcgtggctcg acctggcggc gacgaacggg agaggcgtcg
     1921 gggagaccga tgcggtgaac cggctcaccg ccaacgtgct ggaggcggcc ggttggagtg
     1981 aagccccgcc gctggccaag ttgggaagcg caatcacccg ggagttggag cgggaagatt
     2041 tcgatctgcc ggtacggggg tgagtagcgg cggtcactaa ggcgatggcg agccttctgg
     2101 atacccttca ggctgcactc ggtgcggcct acgtcatcga gcgggagctc ggcggcggtg
     2161 gcatggcccg agttttcctt gccgccgaac cggcactcgg gcgtcaagtc gtcatcaagg
     2221 tacttccgcc ggaactggca gaaaccgtca gtgccgaccg gttccagcgt gagatccagg
     2281 tcgcagccaa gctacagcac ccccatatcg ttcccctact gaccgccggc catgccaatg
     2341 gccttctcta ttacatcatg cccctggttg aaggcgagac gcttcgcggg cggcttgccc
     2401 gcgaggggga gctgccagta gcggaggcct gccggattct agccgaggtt gcgcgcgcgc
     2461 tgagctatgc acacaagcag ggcatcgtgc accgggacat caagcccgag aacattctgg
     2521 tgtccggcgg tg
//
LOCUS       DASYRV010000021         2740 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3536973, whole genome shotgun sequence.
ACCESSION   DASYRV010000021 DASYRV010000000
VERSION     DASYRV010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3536973"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..558)
                     /locus_tag="VGQ24_00470"
     CDS             complement(<1..558)
                     /locus_tag="VGQ24_00470"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEV8453327.1"
                     /translation="MTAALLTSLDGAVLTLTLNRPAKRNALNLELIDLLHSALERADL
                     DAEVRVVVLRGAGKDFCAGADLDELLASAERTLADNEASALRLGGVFTRLRDLPKPVL
                     GMVHGRALAGGAGLATACDLILAARSAQFGYPEIQRGFAPAMVMALLRRVVGEKVALD
                     LALTGRVLSADDAGAAGLVTRVVPDQ"
     gene            complement(555..989)
                     /locus_tag="VGQ24_00475"
     CDS             complement(555..989)
                     /locus_tag="VGQ24_00475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453328.1"
                     /translation="MADSSRRKESKPTPKHRGSGRPRRPAAPLPRLQLRWIAHARSGD
                     KGDTANVGLIALEPEYYPILKKEVTAARVARHFKGMITGVDRFELPNLNALNFLLHGA
                     LDGGGTISLKTDAQGKVYSTALLRMEVPVPVTLARRLSPKPR"
     gene            complement(1034..2410)
                     /locus_tag="VGQ24_00480"
     CDS             complement(1034..2410)
                     /locus_tag="VGQ24_00480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HEV8453329.1"
                     /translation="MSKRVVRVAAGQGFWGDWLEAPVRQVRGGPIDYLMMDYLAEVTM
                     SIMQKQKSRDPKAGYARDFIPLMERILPDIVEKRIGVTSNAGGVNPRGCAEALLEVAR
                     RLGLAGKLKVGLVTGDDILGRLDELIGRGHLLANMETGRPLSDIRDRVQSANAYLGMA
                     PIVEALRGGADVVVTGRVTDTGLTLGPIFHEFGWPADDWDKVAAGTVAGHIIECGAQC
                     SGGNLLKDWRSVKNLGNPGFPIVEASPDGSFVVTKHPRTGGVVSVASVTEQLVYEMGD
                     PRSYITPDGIADFTTIQLQPAGPDRVRVSGIRGSPQTAMLKVSVAYFYGYKAVGTLVY
                     CWPEAYDKARAADRILRERLKDLGLEFEQILTEYVGASATHGRLSGPPDPEAPEIQLR
                     VGVRARERAPVERFTREIAPLVLTGPPSVTGFAGGRPAVEEVVAYWPALIDRREIEPH
                     VAVEILQA"
     gene            complement(2407..>2740)
                     /locus_tag="VGQ24_00485"
     CDS             complement(2407..>2740)
                     /locus_tag="VGQ24_00485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453330.1"
                     /translation="RLQAKLPGGHPAMPVELALFPGFADTTDQSWTARASIRLYADSA
                     IALDPTGGPAMTIPAGKTATARFTLPDSPWPLGDGFFPLAVLAARADEHTWTREGGLP
                     LPSPPITR"
BASE COUNT          447 a          933 c          895 g          465 t
ORIGIN      
        1 ctggtccggc accacccggg tcaccaatcc ggccgctcct gcatcgtcgg ccgagagcac
       61 cctgccggtg agcgcgagat ccagcgcgac cttctctccc acgacccggc ggaggagcgc
      121 catgaccatg gcgggggcaa agccacgctg gatttcggga tacccgaatt gcgcgctcct
      181 ggccgccaaa atcaggtcgc acgcggtagc gaggcccgcg cctccggcga gggctcggcc
      241 gtgcaccatg cccagcacgg gcttcggcag gtcgcggaga cgggtaaaca cccctcccag
      301 tcggagtgcc gaggcttcat tatcggcgag cgtgcgctcg gccgaagcga gcagctcgtc
      361 gaggtcggcg ccggcacaga agtccttccc cgcccccctc aacaccacca cgcgcacttc
      421 ggcatcgaga tcggcgcgct ccagggccga gtggaggaga tcgatcagct ccagattgag
      481 cgcgtttcgc tttgccgggc gattcagggt cagcgtgaga accgcgccat cgagtgaggt
      541 gagaagagcg gcggtcatct gggtttcggg ctcagccggc gggccagtgt aacgggcacc
      601 ggaacctcca tgcgcagcag cgccgtcgag tacaccttgc cctgcgcatc agtcttgagc
      661 gagatggttc cgccgccgtc caaggcgccg tgcagcagaa agttgagagc gttgaggttg
      721 ggcagctcga aacggtccac gccggtgatc atgcccttga agtgccgggc cacccgcgcg
      781 gccgtcacct ccttcttgag gatcgggtaa tactcgggct ccagcgcgat caggccgacg
      841 ttggccgtgt cgcctttgtc gcccgagcgt gcgtgggcta tccagcggag ctggaggcgg
      901 ggcagcgggg cggcggggcg gcggggccgt ccagagccac gatgcttcgg tgttggcttg
      961 gattcttttc gtcgcgagct gtcagccatt caaagccagc ctttgagttt tttcctgccc
     1021 cgctgccccg ccttcacgcc tgtaagatct ccaccgcaac gtgcggctca atctcccgcc
     1081 ggtcgatcag cgcgggccag tacgccacca cctcctccac ggccggccgg ccaccggcaa
     1141 acccggtgac gctcggcggc ccggtcagca ccaatggcgc gatctcgcgg gtgaagcgct
     1201 cgaccggcgc acgctcccgg gcccggacgc ctacccgcag ctgaatctcg ggcgcctcgg
     1261 gatccggagg gccgctcagc cggccatgag tcgcgctggc acccacgtat tccgtgagaa
     1321 tttgctcgaa ctcgaggccc aggtccttca ggcgctctcg caggatgcga tcagcggctc
     1381 ttgccttatc gtaggcctcg ggccagcagt agaccagggt gccgacggcc ttgtagccgt
     1441 agaagtacgc gacggacacc ttcaacatcg ccgtttgcgg ggagccgcga ataccgctga
     1501 cccggacccg gtccgggccg gctggttgta gctggatggt cgtgaagtcg gcgataccgt
     1561 ccggcgtgat gtaactcctg ggatcgccca tctcgtagac cagctgctcg gtgacggagg
     1621 caaccgagac gacgccgccg gtccgcgggt gcttcgtcac cacgaagctc ccgtcgggag
     1681 acgcttccac gatggggaac ccgggattac ccagattctt caccgaacgc caatccttca
     1741 gcaagttgcc accagagcac tgggcaccac actcgataat gtggcccgcg acggtacccg
     1801 ctgccacctt gtcccagtca tccgcgggcc agccgaactc gtggaagatg ggtcccagcg
     1861 tcagcccggt gtcggtcacc cggccggtga ccacgacgtc ggcgccgccc ctgagcgcct
     1921 cgacgatcgg tgccatgccg agatatgcgt tggcggactg cactcggtcc cggatgtcgc
     1981 tgaggggacg gccggtctcc atattcgcca gcaggtggcc tcggccgatc agctcgtcca
     2041 gccgccccag gatatcgtct ccggtgacca gcccgacctt gagcttgccc gccaatccga
     2101 gccggcgtgc cacctcgagc aatgcttcgg cgcagcccct cggattcacc cctcccgcgt
     2161 ttgaggtgac ccctatccgc ttctcgacaa tgtcggggag aattcgctcc atcagtggga
     2221 tgaagtcgcg cgcgtagccc gccttggggt cgcgggattt ctgcttctgc atgatggaca
     2281 tggtcacttc ggccagataa tccatcatga ggtagtcgat gggcccgccg cgtacctgac
     2341 gcaccggagc ctcgagccag tcaccccaga acccctgccc ggcggcgact cgtactaccc
     2401 gcttactcat cgcgtgatcg gtgggctggg tagtgggagg ccaccttccc gggtccaggt
     2461 gtgctcgtcc gcccgcgccg cgagcaccgc cagtggaaag aagccgtcgc ctagcggcca
     2521 cggactgtcg ggcaaggtga aacgggctgt cgccgttttt ccggcgggta tcgtcatcgc
     2581 cggcccacct gtggggtcga gggctatggc cgagtcggcg tagagtcgaa ttgaggcgcg
     2641 agccgtccac gactgatcgg tggtgtcagc aaagccggga aacagcgcca gctcgaccgg
     2701 catggcgggg tggccacccg gcagtttggc ctgaagtcgc
//
LOCUS       DASYRV010000022         3254 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_215370, whole genome shotgun sequence.
ACCESSION   DASYRV010000022 DASYRV010000000
VERSION     DASYRV010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3254
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_215370"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..196)
                     /locus_tag="VGQ24_00490"
     CDS             complement(<1..196)
                     /locus_tag="VGQ24_00490"
                     /inference="COORDINATES: protein motif:HMM:NF013907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453331.1"
                     /translation="MAEGARHVVVGRLRKPHGLKGDCNLFPLTDDPATIFAPGRQIWV
                     VDLGGDTVAGPLTVERSRRYH"
     gene            complement(196..459)
                     /gene="rpsP"
                     /locus_tag="VGQ24_00495"
     CDS             complement(196..459)
                     /gene="rpsP"
                     /locus_tag="VGQ24_00495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEV8453332.1"
                     /translation="MSTRIRLRRVGRKKLPLYRIVVADQESPRDGRFIEILGTYNPKG
                     ATAADKIQIDAEKARQWIAKGATPSDTVQSLLKQAGVFQTTKA"
     gene            complement(481..1824)
                     /gene="ffh"
                     /locus_tag="VGQ24_00500"
     CDS             complement(481..1824)
                     /gene="ffh"
                     /locus_tag="VGQ24_00500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEV8453333.1"
                     /translation="MFDELSSKLNATLQRLTGRGVLTEDAVREGLREIRRILLEADVS
                     FDLTRDFLERVQAKAVGLASLKEVRPGHQLVKIVYDELVVLLGERQAPITYATVPPTV
                     ILLVGLQGSGKTTTAGKLAKRLKLEQKAPFLVAADVYRPAAIDQLHTLGRQVEVGVHS
                     DNASQDVVKIVRDGITAAGKARARSVVVDTAGRLQIDDEMMDELKRLKAAVSPHEILL
                     VADGMTGQDAVRIAKGFHEALGITGVILTKMDGDARGGAALSIYGVTHAPIKYIGVGE
                     KLEALEPFHPDRLAGRILQQGDILSLVEKAQSTVDEKEAERLAKKVQSKKGMDLGDFL
                     NAMRQMQKMGPLKNVLGMLPGMNPAMLQAAKLDDKKLKHVEAIVLSMTPKERSNPDLI
                     NGQRRLRIAKGSGRTVQEVNTLLSQFKQMQKFMKIAGKTGGAGLKLPFGRGGFPG"
     gene            1913..3166
                     /locus_tag="VGQ24_00505"
     CDS             1913..3166
                     /locus_tag="VGQ24_00505"
                     /inference="COORDINATES: protein motif:HMM:NF016196.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="HEV8453334.1"
                     /translation="MSTMQDITNPEERQRNLDRMKRRATGLLVLMGAIFVATSLLEPQ
                     YTWVGYIRATAEASLVGGIADWFAITALFRHPLNIPIPHTAIIPARKDRIGRSLGNFV
                     QNNFLSPDVLTAKLRAARISRRAAEWLSDPEHARTAAQHLGSILRSAGSVIRDEDVHA
                     LLDRSVVEPLRRMAIAPVLAKGLALLTVDDRHQQLLDRVIHGLTRLVAENEALIRERI
                     REESPWWVPELVDDRIHQKVLGGIERTLFEVGADPNHPLRHQFDELLADWTVQLQESP
                     EVIARAEAIKQQVLDPETSGRLAASLWEELKQVLGRQTPSNDGAPGAVARGLSALAAA
                     ALDDEALLEKIDGWVIGAVLRVVEQHRGEVGQMIAQTVSSWDPQETSRRIELMVGRDL
                     QFIRINGTLVGGLVGLLIYTATHAF"
BASE COUNT          538 a         1078 c         1033 g          605 t
ORIGIN      
        1 ggtgatacct ccggcttcgt tccaccgtga gcgggccggc caccgtgtct ccgcccaggt
       61 cgaccaccca gatctgccgt cccggcgcga agatagtggc cgggtcgtcg gtcagaggaa
      121 aaagattaca gtcacccttc aacccatgcg gctttctgag ccggcccacc acgacgtggc
      181 gggcaccctc ggccattacg ccttggtcgt ctggaacacc ccggcctgct tcagcaatga
      241 ctggacggtg tccgacggtg tcgcgccctt ggcgatccat tgccgcgcct tctcggcgtc
      301 gatctgtatc ttgtcggcgg cggtggcgcc cttcgggttg taggtcccga ggatctcgat
      361 gaaccgacca tcgcggggcg actcctggtc ggcgaccaca atacggtaga gcgggagctt
      421 cttccggccg acgcgacgca agcgaatgcg agttgacatg tccgttcctg tgtatgcggg
      481 ttacccgggg aatccgccgc gtccgaaagg cagcttcaga ccggcgcctc cggtcttccc
      541 cgcgatcttc atgaacttct gcatctgctt gaactgactc aggagggtat tgacctcctg
      601 taccgtacgg cccgacccct tggcaatgcg gagccgccgc tgcccgttga tcaggtccgg
      661 gttcgaccgc tccttgggcg tcatcgagag cacgatggcc tcgacatgct tgagcttctt
      721 gtcatccagc ttggcggcct ggagcatcgc cgggttcatg cccggcagca tgccgagcac
      781 attcttgagc ggccccattt tctgcatctg ccgcatggcg ttgaggaagt cgccgagatc
      841 catccccttc ttggactgga ccttcttggc cagccgctcg gcttccttct cgtcgacggt
      901 agactgcgcc ttctccacca gggacagaat gtcgccctgc tggagaatcc ggcccgccaa
      961 ccggtcgggg tggaacggct ccagcgcctc gagcttctcg cccacaccga tgtacttgat
     1021 cggcgcgtgg gtgacaccgt agatcgagag cgctgctcca ccacgggcgt cgccatccat
     1081 cttggtgagg atgacgccgg tgatgccgag cgcctcgtgg aatcccttgg cgatccggac
     1141 cgcgtcctgt ccggtcatgc catcagcgac gagcaggatc tcgtgcggcg acaccgccgc
     1201 cttgagccgc ttgagctcgt ccatcatctc gtcgtcgatc tggagacggc ccgcggtgtc
     1261 cacgacgacg ctccgggccc gcgccttgcc cgcggccgta atgccgtccc gcacgatctt
     1321 cacgacgtcc tgtgaggcgt tgtcgctgtg gaccccgacc tcgacttgcc gtcccaacgt
     1381 gtgcagctgg tcgatggcgg cgggacgata cacgtctgcg gcgacgagaa acggtgcctt
     1441 ctgctccagc ttgagccgct tggccagctt gcccgccgtg gtcgtcttgc ccgagccctg
     1501 gagtccgacc aagaggatca ccgtcggcgg caccgtcgca tatgtgatcg gcgcctgcct
     1561 ctctccgagc agtacgacca gctcgtcgta cacgatcttg accagctggt gtccggggcg
     1621 gacctccttg agcgaggcta gacccactgc cttagcctgc acccgctcca gaaagtcccg
     1681 ggtgagatcg aagctcacgt cggcctcgag caggatccgc cggatctccc ggagcccctc
     1741 tctgactgcg tcttccgtca aaacgccgcg cccggtaagc cgctggagcg tggcgttgag
     1801 tttgctggaa agctcgtcga acataagccc gtaagcttaa cggacaaacg aggtttcttc
     1861 aaggacaggt accgccgtac cgccgtacgg ccgtaccgcc tacacttcca ccatgtcgac
     1921 gatgcaggac atcaccaacc ctgaagagcg ccagcgtaat ctcgatcgga tgaagcgccg
     1981 ggctacgggg ctgctcgtgc tcatgggggc catcttcgtc gcgaccagcc ttctggagcc
     2041 acagtacacc tgggtcggct acatccgggc gacagccgag gcgtcgctgg tgggcggcat
     2101 cgccgactgg tttgccatca cggcactctt ccggcacccc ttgaacattc ccatccccca
     2161 taccgccatc atccccgccc gaaaggatcg gatcgggcga agtctcggca acttcgtgca
     2221 gaacaacttt ctctcaccgg acgtattgac ggccaagctc cgcgccgcgc ggatcagccg
     2281 gcgtgccgcc gagtggctca gcgaccccga gcacgcgcgc accgccgcgc agcacctcgg
     2341 gtccatcctg cggagcgccg ggagcgtcat acgggacgag gatgtccatg ccctactcga
     2401 tcggagcgtg gtcgagccgc tccgtcggat ggcgatcgcg ccggtgctgg ccaagggcct
     2461 ggcgctcctg acggtagacg atcgccatca gcaattgctc gatcgggtga ttcacgggct
     2521 cacccggctc gtggcggaga acgaggcgct gatccgggag cggatccggg aggagagccc
     2581 ctggtgggtg cccgagctgg tggacgaccg gatccatcaa aaggtgcttg gcggcatcga
     2641 gcggacgctg ttcgaggtcg gggccgaccc gaatcacccc ttgcgccatc agttcgacga
     2701 gctcctcgcc gactggacgg tgcagctcca ggaatcgccg gaggtcattg cgcgcgccga
     2761 ggcgatcaag cagcaggtac tcgatccgga gacgagcggt cggctcgccg cgtcattgtg
     2821 ggaagagctg aagcaggtgc tcgggcggca gacgccatcg aacgatggcg cacccggtgc
     2881 cgtagcccgc ggcctttcgg cgctggccgc cgcagcgctg gatgacgagg cgttgctgga
     2941 aaagatcgac ggctgggtga tcggggccgt gcttcgggtg gtggagcagc atcggggcga
     3001 ggtgggccag atgattgctc agaccgtcag ctcatgggat ccgcaggaga cctcccgccg
     3061 gatcgagctc atggtcgggc gggatctgca gttcatccga atcaatggga cgttagtcgg
     3121 aggtctcgta ggactgttga tttacacggc gacccacgcg ttctaggcag cgcgcctgtc
     3181 gctgggcatc aacgcccgcc ctaaagggcg ggccctttct tatttgttgg cgtggacgcc
     3241 aagccggccc aaaa
//
LOCUS       DASYRV010000023         3048 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_7631, whole genome shotgun sequence.
ACCESSION   DASYRV010000023 DASYRV010000000
VERSION     DASYRV010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3048
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7631"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            418..1062
                     /locus_tag="VGQ24_00510"
     CDS             418..1062
                     /locus_tag="VGQ24_00510"
                     /inference="COORDINATES: protein motif:HMM:NF014045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEV8453335.1"
                     /translation="MFLDYENLALGAREHLGGMTFDLRPIADALAERGRVVVRRAYAD
                     WSYFDEDRRMLTRSHVELIDIPQRMGASRKNAADIKMAVDALELAFERDYISTFVFCT
                     GDSDFTPLVHKLRELNKRVIGVGVEKTTSALLPPACDEFLYYDRLEGVEIPPARTRGS
                     RPATPPETEPQPIEQEPEPQPAADGSAGNCQESRLLLTRRRLYDSASSVGRPGL"
     gene            1178..1603
                     /locus_tag="VGQ24_00515"
     CDS             1178..1603
                     /locus_tag="VGQ24_00515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453336.1"
                     /translation="MRRRLFAFILILGIPVLTVGVAAPVNAQTTPTIDITSATLVAKG
                     AAVDVDVTITCDVSTFAGGVSVTVTQRSGNVVMEGSGSVSPLNSCTGEPQIVTVPVLA
                     QAGGRPFKIGEAVATGHLSACTPLGCDFVNTTQTIRITR"
     gene            2038..2271
                     /locus_tag="VGQ24_00520"
     CDS             2038..2271
                     /locus_tag="VGQ24_00520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453337.1"
                     /translation="MAWGKRVALGNPDADHSHVDTLVALDVPFAPEAAVSGPRVLQTD
                     EVLLLGFNAVDLSTTPRRHIGRGKHRCWSPREG"
     gene            2276..2794
                     /locus_tag="VGQ24_00525"
     CDS             2276..2794
                     /locus_tag="VGQ24_00525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453338.1"
                     /translation="MVTTERVTKGQAEAVLNAAGTGGGAIKSHHTESLGAPADIELRA
                     SIRPFRNTVFDRRHYCAEDWHTIVALDFEGGDATFTEQDARVIMGQIVFEFLLDGDPL
                     ATTRLPIKRLLVPQPFFEVAYYFQQGVVMSPTALTVGRHTLKLIVTDPSGTGEDQCTF
                     YIDAPGTGACIQ"
BASE COUNT          529 a          934 c         1012 g          573 t
ORIGIN      
        1 aggagccagg cggggcaggt gttgccatgg cgactgcgtc gggaggcgtg ggtgggtttc
       61 aacgcggggt gtcgcagcca gcgtgcgagg gaggacaggt cggggaagca ccgcgtcgag
      121 gacgaacccg gcgtcgggtg cgggcttgcg gcttgatcgg cgtccggtga tagctggctg
      181 ctgtaccgaa cggccgcgca tattctggcc gcccacccac ccgtgcgggc gcgctcgttt
      241 cgttcgcaac ttcgccttcg tggaggaaca acagcccagc cacccgatgt gcgaggtcgt
      301 gtctgcgctg ccgccggtcg tggtggcggg ccactggacg tgcgggttcc aggctgctca
      361 ccggctccgg gggcggggcg tacgctggcc tgcgtggatc aagaggagcg catcgccgtg
      421 ttccttgact acgagaacct ggcgcttggt gcgcgcgagc accttggcgg catgacgttc
      481 gacctgcggc cgatcgccga tgcgcttgcc gagcgggggc gggtggtggt acgtcgggca
      541 tacgccgact ggtcgtactt cgatgaggat cgccggatgc tcactcgatc acacgtggaa
      601 ctcatcgaca taccgcagcg catgggcgcc tcgcgcaaga acgccgccga catcaagatg
      661 gccgtcgacg ccctggagct ggccttcgag cgggactaca tctcaacatt tgtgttttgc
      721 accggcgata gcgacttcac tccgctggtc cacaagcttc gcgagctcaa caagcgtgtt
      781 atcggcgtcg gagtcgagaa gacaacctcg gcgctcctac cgccggcttg cgacgagttc
      841 ctctactacg accgtctgga gggtgtcgag atcccgccgg cgcgtacccg ggggagccgt
      901 ccggcgacgc ccccggagac agagccgcag ccgatcgagc aggagcccga acctcaaccg
      961 gctgcggacg gatcggccgg gaactgccaa gagagtcgcc tcttgctgac gcgccggcga
     1021 ctctacgact cggccagctc ggtcggcaga ccggggttgt gaaaaggaaa tctcggggcc
     1081 attgcggcac gaaaatctgt cgggttgccg acagttcctt gccatgccac gggattactg
     1141 tttggtggct ggggcggctc gctcactagg gggcatcatg cgccgccgat tgttcgcctt
     1201 catcctcatc ctgggcatac ccgtgctgac cgtcggtgtc gcggcaccgg tcaacgccca
     1261 gaccaccccc actatcgaca tcacatcggc gaccctggtt gcgaaaggcg ccgcggtgga
     1321 tgtcgatgtc acgatcacct gcgacgtgtc gaccttcgcc ggcggcgtca gcgtgaccgt
     1381 cacgcagcga tccggcaacg tcgtcatgga gggctccgga tcggtctcgc cactgaactc
     1441 gtgcaccggc gagcctcaga tcgtcacggt gcctgtgctg gcccaggccg gcggccgccc
     1501 attcaagatt ggcgaggcgg tcgcgacggg tcacctgtcg gcatgcaccc cgctcgggtg
     1561 tgacttcgtc aacaccaccc agaccatccg catcaccagg tgagccgacc cgaccgggcg
     1621 aacggccgcc agacatcaga acaccgtcgg cgacgcgcgc cgcgcggtgg cacgccggcg
     1681 cgacgagagc cgctcggctg cgcatttgcc gaggttgcgg accacatcca gcggattact
     1741 gccgatggag gtagcacgcc cggttctaag tgggtgtcta actgggcgtc aatcggtgcg
     1801 gagaacggcg gacgtcggtg gacccgcgtg gactgttacc gcaggtcaaa gcacctgcgt
     1861 ggcctgttca gcgacccaag atcattcctt gacacggaag cggtcctgtt ccgaccaatc
     1921 gaggcccggc ctcgtggcgg agcgaggcgc gccgtggtcg ctgggtgcgg gtacccgggt
     1981 ggatggcggt tccggcggcg gcccgctccc cggggggtgg ctcgacggca gacagtgatg
     2041 gcttggggca agcgcgttgc gctggggaac cccgacgctg atcattcaca cgtggatacc
     2101 ctggttgccc tcgacgtacc gttcgccccg gaggcggcgg tgtcggggcc acgcgtgctc
     2161 cagacggacg aagtgctcct gctcggcttc aacgcggtag atctgtcgac cacgccgcgg
     2221 aggcacatcg gccgggggaa gcatcggtgt tggtcaccaa gagagggatg actggatggt
     2281 tacgaccgag cgagtgacga aaggccaagc ggaggcagtt ctcaatgctg ctgggacggg
     2341 tggaggcgcc attaagtcgc accacactga aagcctgggt gcgcctgccg atatcgagct
     2401 gcgcgcatct attagacctt ttagaaatac cgttttcgat cgccgtcact actgtgcgga
     2461 ggattggcac actattgtgg cactcgattt tgagggcggc gatgcgactt ttactgagca
     2521 agatgccagg gtcataatgg gccagatcgt attcgaattc cttcttgatg gcgacccttt
     2581 ggcgactacc cgtttgccca taaagcgatt attggtgccc cagccattct ttgaggtggc
     2641 ttactacttt cagcaaggag tggttatgtc gccaactgcg ctaactgtgg gccgtcatac
     2701 tttgaagcta atcgttacgg acccatcagg caccggagag gatcagtgca ctttctatat
     2761 cgatgcgcca ggtactgggg cctgcataca atgagttctg cgtatactat caatgctgcc
     2821 tagatctgaa aatcggacgc tcaccgccgt accacccgta caatcatccc gcaatcgtcc
     2881 agtgcgcgtg tcgaagtttt gatgccaccc agacgtcatc cctcgccaca gtcggcggcc
     2941 tcctgacttc ggccacattc tggatttgat cttggcggca gggcggtgac ctgcgggttc
     3001 gctgccgacg attggtgaat ctgcgcacta ggcgaggccg tatcgtgg
//
LOCUS       DASYRV010000024         2410 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1254771, whole genome shotgun sequence.
ACCESSION   DASYRV010000024 DASYRV010000000
VERSION     DASYRV010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2410
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1254771"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..274)
                     /locus_tag="VGQ24_00530"
     CDS             complement(<1..274)
                     /locus_tag="VGQ24_00530"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEV8453339.1"
                     /translation="MTQAKLGDTVRVHYTGKLEDGTVFDSSEENEPMELTLGNGTVIP
                     GLEQGIVGMTPGEEKTEWVPCDMAYGPYQEDLTVEVDRVLFLEQQLV"
     gene            751..1434
                     /locus_tag="VGQ24_00535"
     CDS             751..1434
                     /locus_tag="VGQ24_00535"
                     /inference="COORDINATES: protein motif:HMM:NF012976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protocatechuate 3,4-dioxygenase"
                     /protein_id="HEV8453340.1"
                     /translation="MAKQWHCGDPWSRRRLLAAMAGSIAALVVPAPLRLLAANGCAVT
                     PPQTEGPFYPVHDQSDKDNDLTRMNGAPGRAIGQIIQLEGSVRDATCRPIPGATVEIW
                     QANANGRYNHPDDRNTRAAPDPHFQHWGLTTTDRDGRYTFKTVVPAPYPAGFFWTRPA
                     HIHFKVRRPGSPTLTTQMYFAGDPYLTRDRIFQAIPPPARPRVVVSLEPPGPEYDADA
                     RLCRFNLIV"
     gene            1515..2408
                     /locus_tag="VGQ24_00540"
     CDS             1515..2408
                     /locus_tag="VGQ24_00540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453341.1"
                     /translation="MAESGPPSVSLLLALALGLLPGMGLAIEPPPLVFETPPHFAPLA
                     RRLQSLNPHAVRAAMELVGLPDSGPPIPVILAPEESEPARRTASWVAGYTIIPAGRIV
                     LFPDRQVSYPHGSFEGLLLHELTHVFVLRVTGAHRAPRWFEEGLAMVAAQERTLDDQL
                     WGYWIGLTAAPIPLQALDRLFGEDPPAVDKAYLLAEALVRYLIASQGPDAPRRILEER
                     AHGISFAEAVQRATGQRLPHLEREFWAQHTSWGRWVPVVTSTAVLWAVIVLLVWIAWH
                     KQRQRAALVQRQWEEDEEREP"
BASE COUNT          420 a          820 c          747 g          423 t
ORIGIN      
        1 ggaccagctg ctgctcgagg aacaggacgc gatccacctc gactgtcaag tcctcctggt
       61 acgggccgta cgccatatcg cagggcaccc attcggtttt ctcttcccct ggggtcatcc
      121 cgacgatccc ctgctctaag cccggaatca ccgtcccgtt tcccagggtc aactccatcg
      181 gctcattctc ttctgaggaa tcgaagacgg tcccatcctc aagcttcccg gtatagtgca
      241 cccgaaccgt atcccctaat tttgcctgtg tcataccctt ctccttcgtc agattgcgat
      301 catctctctg actgggccga acatcagagt ccatcaacaa aagaccccaa agcagacaac
      361 gagcctcggt agcggaacac ttggtgtcca gaggaagact tgagcggacg ttccaagcat
      421 gggctgccga ggggaaaagg caggatagga tgccagaact cgcaaaccag acgtctggcc
      481 accgcatgcg accgcatgaa ttatcgtagc atgggagcgc agagggatac gaggggggcc
      541 tcacagagcc tcctcaacca ccatcgcgac tttctcgcga tcacgaactt cgaccgtcag
      601 ggtattgctg atcgcgtagc cgatgatctc cggtgtggct ggcggcggcg ctccctttcc
      661 ctcagatgtc ggccgcctgt atcatggaga gacgaggcag gaacgactgt acacgaggcg
      721 aaatggctca cggctgagga gatcatcgcc gtggccaagc agtggcattg cggcgatccg
      781 tggtcgcggc gccggctgct tgccgccatg gccggttcta tcgccgccct ggtcgtgccg
      841 gcaccgctcc gcctgttagc cgcgaacggc tgcgcagtca ctccgcctca gacagaaggg
      901 cccttctacc cggtgcacga tcagtctgac aaggacaacg atctcacccg gatgaatggc
      961 gctcccggcc gcgccatcgg acagatcatt cagctcgaag gatccgtccg cgacgcgacc
     1021 tgccgtccca tccccggcgc gactgtcgag atctggcagg ccaacgcgaa cggccgctac
     1081 aaccatccgg atgaccggaa cacgcgcgcc gcgccggacc ctcattttca gcactggggg
     1141 ctgacgacca ccgatcggga cgggcggtac acattcaaga ccgtagtgcc ggcgccctat
     1201 ccagccggat tcttctggac tcgccccgct catatccatt tcaaggtgcg ccggcctggc
     1261 agccctacgc taaccacaca gatgtacttc gccggcgacc cgtacctgac gcgggatcgc
     1321 atcttccagg cgatcccgcc gcctgcaaga ccgcgggtcg tcgtgagcct agagccgccc
     1381 ggcccggagt acgacgccga tgcccgtctc tgccgcttca atctgatcgt gtagtgctcc
     1441 aagggaggtc ggtttcgggc agaccttccc cttggtggac cgacccgatc acgtcaccag
     1501 caatggagag gagtatggcc gaaagcggac cgccgagcgt gagcctgctg ctggcgctgg
     1561 ccctcggcct gctgcccggg atgggtctcg cgatcgagcc cccgccgctc gtcttcgaga
     1621 cgccaccgca ctttgcacct ctggccaggc gcctgcagag cctgaatccg catgccgtgc
     1681 gcgcggcgat ggagctggtc ggcctcccgg actccggacc gccgattccc gtcatcttgg
     1741 cgccggaaga gtccgagccc gctcggcgaa ccgcctcctg ggtggccggc tacaccatca
     1801 ttcccgctgg tcggatcgtg ctcttccctg atcggcaggt ctcctacccg cacggctcct
     1861 tcgagggcct cctgctgcac gagctcacgc atgtgttcgt cctgcgagtg acgggagctc
     1921 acagggcgcc gcgctggttc gaagaagggc tcgcgatggt cgcggcgcag gagcgaacgc
     1981 tggacgacca actgtgggga tactggatcg ggctgaccgc ggccccgatc ccgctgcagg
     2041 cgctcgaccg gctgttcggc gaggatccgc ccgcggtcga caaggcctat ctcttggcgg
     2101 aagccctggt gcgctatctc atcgcgtcgc aggggcccga cgccccgcga cggatcctcg
     2161 aggagcgggc ccacggcatc tcgtttgccg aagcggtgca gcgcgcgacg gggcagcgtc
     2221 tgccgcacct ggagcgggag ttctgggccc agcacacctc gtgggggcgc tgggtccccg
     2281 tggtgaccag cacggcggtc ctatgggcgg tcatcgtcct gctggtgtgg atcgcgtggc
     2341 acaagcagcg gcagcgcgcc gctctcgtgc aacggcagtg ggaggaggac gaggagcgcg
     2401 agccctgatc
//
LOCUS       DASYRV010000025         6956 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_425436, whole genome shotgun sequence.
ACCESSION   DASYRV010000025 DASYRV010000000
VERSION     DASYRV010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6956
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425436"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..980)
                     /locus_tag="VGQ24_00545"
     CDS             complement(81..980)
                     /locus_tag="VGQ24_00545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-[acyl-carrier-protein] reductase"
                     /protein_id="HEV8453342.1"
                     /translation="MLAIDLTGKRALVAGVSDDGGFGFAIAKTLAEAGASVCLGSWPP
                     ALGIFTKLLERGKMEESMQLANGRKLEFERIYPLDAAFDALADAPPEVRDNKRYKEVG
                     DFSIQGMTDRIRADFGEGALDIVVHSLANAPEVRSPLVDTSRQGYLSAISVSAYSNIS
                     LVRHLSPLMGPSGAFLSLTYMAGERVIPGYGGGMSSAKAALEADTRTLAFEAGRRWGV
                     RVNAISAGPWASRAATAIGFIHTMIKYTASNSPLPRPIDAADVGSTAAFLCSPLARAI
                     TGSVVYVDNGYHAMGMAVVENEG"
     gene            complement(992..3520)
                     /locus_tag="VGQ24_00550"
     CDS             complement(992..3520)
                     /locus_tag="VGQ24_00550"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEV8453343.1"
                     /translation="MFVLRMAARELRATPRRLFLLTGTVAVGVAALVAINSFTDNLQD
                     SVRQQARALLGADLSLLSRQPFSRRVEALLDTLSQRSPSARVTSFSGMAYVPRTAGTR
                     LVQVAAVAGRFPFYGTIGTEPPGAWTELQTGRHIVVDPSLLTALGARLGDTVSLGEAH
                     FVISGTIQSAPSDVGFRFAFGPRVYIPAKYLRETGLLGLGARVQYEAFLKLPASVSAQ
                     ALADRYRAALRPERVRVKTVAEDQRNLNEVLSKLTGYLGLVALIALLLGGIGVASAAV
                     VFIRQRSASIAILRCLGTTAGQVFMIYLVEAGVMALLGSVVGALVGVGLQRLLPRLLA
                     GFIPVDVIPAVSWSAVATGIGTGVVVGVVFAALPILAVRRISPLSALRRPFESEGPPR
                     DPWRLVAALALVASSVALARLQVGSWRQGSIFAGAVGVALLLLWAASWALVQGMRRWL
                     PERWPYVWRQGLANLHRPANQTVTLVLAIGFGAFLLGTLYLVQYNLLRQLRLAGGPAR
                     PNLVLFDIQPDQLGAVEGELKAAGLPLIGPTPIVPMRIRSVNGRPVAKLLADTSRTSE
                     GRSSAWAFRREYRSTYRDSVVASERVVHGRWWRPGDRGAGRISIEQDVARELGVGLGD
                     EIVWDVQGIPVTSKVASVRVVDWARFEPNFFVVFAPGALEDAPRTFVTLTRLASAADR
                     GTFQRKLAERFPNVSTLDLSMLQEALERLVDRVALAIRFMALFSLMVGALVLVGALAS
                     SRFQRVREGALLRTLGATRGQVFRVVLAEYLSLGLLASAVALVLAAVAGWAVAHFLFD
                     GTFSLPVLPMSALAAAIVLLTVVVGLGNSRDVVRRAPLEVLREE"
     gene            complement(3529..4212)
                     /locus_tag="VGQ24_00555"
     CDS             complement(3529..4212)
                     /locus_tag="VGQ24_00555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEV8453344.1"
                     /translation="MPEAVLHSQSLSRTYRSGGRDLTVLKDITFSLEPGGFLAILGPS
                     GSGKTTLLGLLAGLDRPSAGSVYLDGQELGSLTEDERARLRGEKIGFVFQAFQLIPTL
                     TAQENIQVPLELRGDAYAVPRARELLERVGLGGRGHHYPAQLSGGEQQRVALARGFSS
                     RPKVLFADEPTGNLDAATGATIIDLMVELNRDLGTTLVLVTHDLDLAARARRTIRLAD
                     GRVVADTAA"
     gene            4218..4913
                     /locus_tag="VGQ24_00560"
     CDS             4218..4913
                     /locus_tag="VGQ24_00560"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HEV8453345.1"
                     /translation="MIVRSIIIFALVTALSGCEQAREESPAKASPSSADSERPSVLFL
                     GTSLSAGLGLEPEQAYPALIQQKIDSAGLDYRVVNAGVSGETSAGALRRVDWLFREPV
                     SVLVVETGANDGLRGLPPDTLRANIQAIFDRAKQLHPRPRLVLLGMRMPPNYGRAYSQ
                     RFQEVYRDLAHRNDAALVPFLLEGVGGIASLNQPDGMHPTAEGQRRLAETVWRVLEPV
                     LRGKKREREQPKA"
     gene            complement(4977..6185)
                     /locus_tag="VGQ24_00565"
     CDS             complement(4977..6185)
                     /locus_tag="VGQ24_00565"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEV8453346.1"
                     /translation="MTVASASDLARWRAETPGCEHLIHLNNAGAALVPRTVRDTIDAH
                     LDLEEQLGGYEAAEDQAAQLHAAYDSVACLLGARARNIAVVQNSTVAYAQAISAFDFE
                     PGDVVLTSRSDYASNQIMFLSLARRRGVEVVRAPDAAEGGIDPDAVRRLVSRRRPALV
                     ALTWVPTNSGLVQPVEAVGRICQEAGVPYLVDGCQVVGQMPIDVQLLGCDYLAAAARK
                     FLRGPRGVGFLYVSDQRLEAGAHPLLVDMHGATWVEADAFDLTPDARRFESWEFAYAL
                     VLGLGAAAAYALDVGVDNARDRARELASYARTRLAMVSGVRVLDRGPELCAIVTAAVA
                     GRHTKEIKLALRARGINTSSPEREDAVIDMDEKQASSALRISPHYYNTKEEIDIAIDA
                     LKEIVTLRVR"
     gene            complement(6182..6817)
                     /locus_tag="VGQ24_00570"
     CDS             complement(6182..6817)
                     /locus_tag="VGQ24_00570"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEV8453347.1"
                     /translation="MITRTPLRDQVYQAVLTRIYRGDLPPAGRVRDTDLAAQLGVSRT
                     PVREALLRLSREGVLEADMGRGFSVRPLEATEMRETGAILSTLEGLALQLSGDIPPGR
                     LARLGEIDRELAATRGDVDRCIDLDEEWHRTLLEGCPNLRLRAMISTLWQVPRRYMRA
                     FLREAGRVSLSTQHHARIVEALRRNDRDTAMQRFSHHWQRGIEELGAWIEG"
BASE COUNT         1273 a         2351 c         2274 g         1058 t
ORIGIN      
        1 gccccttgat cgagaaaccg ttcgagctgt cggtgttggc tcagttgatc gaggcggtgc
       61 ttcgaggacg ctgagcgggc tcagccttcg ttctctacca ccgccattcc catggcatgg
      121 tatccgttat ccacgtacac gacgctgccg gtgatggcgc gggcgagcgg gctgcagagg
      181 aatgccgccg tgctccccac atcggccgca tcgatcggcc ggggtagcgg cgagttgctg
      241 gcggtgtact tgatcatggt atggatgaat ccgatcgcgg tcgccgcccg cgacgcccag
      301 ggtcccgccg agatggcgtt tacccgaaca ccccaacggc gtcccgcttc gaacgccagg
      361 gtccgcgtgt cggcttcgag cgcggccttg gccgacgaca tgccaccgcc atatccggga
      421 atcacccgct cgccggccat gtaggtcaag gacaggaagg ccccgctcgg gcccatgagc
      481 ggagagaggt gccgcacgag cgagatgttg ctgtacgcgc tgacgctgat ggcggagaga
      541 tagccctgcc gggaggtgtc gaccagcggt gacctgacct cgggcgcatt cgccaggctg
      601 tgcaccacga tgtcgagcgc gccctcgccg aaatcggcgc gaatccggtc ggtcattccc
      661 tgaatgctga agtcaccgac ctccttatag cgcttgttgt cacgcacctc gggcggagcg
      721 tcggccaggg catcgaaggc ggcatccagc ggatagatcc gctcgaactc cagcttgcgg
      781 ccgttggcca gctgcatcga ctcctccatc ttgccgcgct cgaggagctt ggtgaagatg
      841 cccagcgccg gcggccagct tcccagacaa accgaggctc cagcctctgc caatgtcttg
      901 gcgatcgcga atccgaatcc gccgtcgtcg gacacgcccg ccacgagagc acgcttaccg
      961 gtcaggtcga ttgcaagcat gcggtaagct actactcctc tcgcagcacc tccagcggag
     1021 ctcgccgcac cacgtcccgg ctgttgccga gcccgacgac aaccgtgagc agcacgatcg
     1081 ctgccgcgag agcgctcatg gggaggacag ggagcgagaa cgtgccatcg aacaggaaat
     1141 gggctaccgc ccagccggca acagccgcga gcaccaatgc cacggccgat gcgagcaggc
     1201 ccagtgacag atattcggcg agcaccacgc ggaacacctg cccccgcgtg gcccccagcg
     1261 tgcgcagcag ggcgccctcc cgcacccgct gaaaccggct gctggcgagt gcgcccacca
     1321 ggaccagagc gccaaccatc aggctgaaca gcgccatgaa ccggatggca agcgccaccc
     1381 ggtccaccag ccgctccagg gcctcctgca gcatcgaaag atccagagtc gagacgttgg
     1441 ggaatcgttc ggccagcttg cgctggaagg tcccccggtc ggccgcgctt gcgagccggg
     1501 tgagggtcac gaaggtacgg ggcgcgtctt ccagcgcccc cggagcaaac accacaaaga
     1561 agttcggctc gaagcgggcc cagtccacca cccgcacgct ggccaccttc gaagttacgg
     1621 ggataccctg cacatcccac acgatctcgt cgccaaggcc gacgccaagc tcccgggcca
     1681 cgtcctgttc gatcgagatc cggccggcac cacgatcgcc aggtcgccac cacctcccgt
     1741 ggaccacacg ctcagaggca accaccgaat cccggtaggt ggatcgatat tcacggcgga
     1801 aggcccaggc gctcgaccgc ccttcgctgg tccgcgatgt gtcggcgaga agcttggcca
     1861 ccggccgtcc gttgacggaa cgaatccgca tcgggacgat cggggtgggg ccgatcagcg
     1921 gtagccccgc agccttcagc tcgccctcga ctgcgccgag ctggtccggc tggatgtcga
     1981 acaggaccag attcggccgg gccggcccgc cggccagccg gagctggcgc agcaggttgt
     2041 actgcaccag atacagcgtt ccgagcagga aggctccgaa gccgatcgcc agcacgaggg
     2101 ttacggtttg attggctggc cggtgcaggt tggccagtcc ctgccgccag acgtagggcc
     2161 atcgctcggg gagccaacgc cgcatcccct ggaccagagc ccacgacgca gcccagagga
     2221 gcagcaacgc aaccccgacc gccccggcga agatgctacc ttgccgccag cttcccacct
     2281 gaagccgggc cagtgccacg ctgctggcga cgagggcgag agcagccacc agccgccagg
     2341 gatcgcgcgg gggaccctcg gattcgaacg gacgccgcaa cgccgagagc ggagagatcc
     2401 ggcggacggc gaggatcggc agggccgcga agaccacgcc gaccacgact cccgtcccga
     2461 tcccagtagc cacagcactc caggaaacgg ccgggatgac atcgactggg atgaatccgg
     2521 caagcagccg ggggagcaga cgttggagac cgacccccac cagcgctccg acaacgcttc
     2581 ccagcaacgc catcaccccg gcctcgacca ggtagatcat gaatacctgg ccggcggtgg
     2641 tgcccaggca gcgcaggatg gcgatcgatg cggaccgctg ccggatgaaa accaccgccg
     2701 cactggccac accgatgccc cccagcagca gcgcgatgag ggcaacgagg cccagatagc
     2761 cggtgagctt ggagaggacc tcgttgaggt tccgctggtc ctcggcgacc gtcttcaccc
     2821 ggactcgctc gggcctgagc gccgcccggt aacgatccgc cagtgcctgg gcggaaacgc
     2881 tcgccggcag cttgagaaat gcctcgtatt gaactctggc tccgagaccg agcagaccgg
     2941 tctcccgcag atacttcgcc gggatgtaca cccgcggccc gaaggcaaag cgaaatccca
     3001 catcgctggg cgcgctttgg atagtgcccg agatgacgaa atgcgcctcg ccgagcgaga
     3061 cggtatcgcc gaggcgggca ccgagtgccg tgagcagcga tgggtcgacc acgatgtgcc
     3121 ggccggtctg gagctcggtc caggccccgg gcggctcggt cccgatcgtg ccataaaacg
     3181 gaaaccgccc cgccaccgcg gccacttgca ccagccgggt accggccgtc cgagggacgt
     3241 acgccattcc cgagaagctg gtcactcgcg cggatgggga gcgctgggac agggtgtcga
     3301 gcagcgcctc gacccggcgc gagaacggct ggcggctcag cagtgacaga tccgcgccga
     3361 gcagggcccg ggcctgctgc ctgaccgaat cctggaggtt gtcggtgaac gagttgatgg
     3421 cgacgagcgc agccacaccc acggcgacgg tgccagtcag cagaaacagc cgtcgaggcg
     3481 tggctcggag ctccctcgcc gccatgcgca gcacgaacat cgcaacgctc acgctgcggt
     3541 gtcggccacg actctcccgt cggccagccg gatggtgcgg cgcgcgcgag ccgcgagatc
     3601 gagatcgtgc gtcaccagca ccagggtggt acccagatcg cgattcagct ccaccatgag
     3661 atcgatgatt gtggcgccgg tggctgcatc gaggttcccg gtcggctcgt cggcgaagag
     3721 gaccttgggc cggctgctga aaccgcgcgc cagggccacg cgctgctgct cgccgcccga
     3781 tagctgggca ggatagtgat gtccccgtcc acccagcccg acgcgctcga gcagctcccg
     3841 cgctctgggt acggcatacg cgtcgccgcg aagctcgagg ggcacctgaa tgttttcctg
     3901 cgccgtgagt gtagggatga gctgaaaagc ttggaacacg aacccgatct tctcaccccg
     3961 gagacgggcg cgctcatcct cggtcagtga gccgagctcc tgtccatcga ggtagaccga
     4021 gccggcggag ggtcggtcca atccggccag caggccgaga agcgtggtct tgccacttcc
     4081 cgacggaccg agaatcgcga ggaacccgcc cggctccaga ctgaaggtga tatccttcaa
     4141 caccgtgaga tcccggccgc ccgagcggta ggtccggctg agcgattggc tgtgcaacac
     4201 ggcttcaggc atctccaatg atagtcagat ccatcatcat cttcgccttg gtgacggcac
     4261 tctccggatg cgagcaggcc agagaggaat ctcccgccaa ggcttccccg tcgtcagccg
     4321 attccgagcg cccgtcggtg ctgtttctcg gcaccagcct gagcgccggg ctcgggctcg
     4381 agccggagca ggcctatcct gcgctgattc aacagaagat cgactcggcc gggctcgact
     4441 accgagtcgt caacgccggg gtcagtgggg agacctcggc gggagcgctt cggagagtgg
     4501 actggctctt tcgtgagccg gtgtcggtac tcgtggtcga gaccggagcc aacgacggac
     4561 tccgcggtct tcctccggac accttacgcg caaacatcca ggccatcttc gaccgggcca
     4621 agcagctcca cccccggccc cggctcgtgc tgctgggcat gcggatgccc cccaattatg
     4681 gcagagcgta ctcccagagg tttcaggagg tgtaccggga tctcgcgcac agaaacgacg
     4741 ctgccctggt gccgttcctg ctcgagggtg tggggggaat tgccagcttg aaccagccgg
     4801 atggcatgca tccgacggcg gagggacaac gcaggttggc ggagaccgtg tggcgggtgc
     4861 tggagccggt gttacggggg aaaaagcgtg agcgggaaca gccaaaagcg tgagcggtga
     4921 gcggggcaga aaaccgatgg gccgaaactc aaccctcgct ccgcccccct cgggcgctac
     4981 cgcaccctca gggtgacaat ctccttcaag gcatcgatcg cgatatcgat ctcttccttc
     5041 gtgttgtagt agtgcggcga gattctcagg gccgagcttg cctgtttctc atccatatcg
     5101 atcacggcat cctcccgctc cggcgagctg gtgttgatgc cccgcgcgcg gagggccagc
     5161 ttgatctcct tcgtgtgccg tcccgccacg gcagcggtga cgatggcaca gagctccgga
     5221 ccgcgatcga gcacgcgcac ccccgacacc atcgcaagcc gcgttcgagc ataggaggcc
     5281 agctcgcgtg cccgatcccg agcgttatcc actccgacgt cgagggcgta ggccgcggcc
     5341 gcgccgaggc cgagcaccag cgcgtaggca aactcccagc tttcgaagcg ccgggcatcg
     5401 ggcgtgagat cgaaggcatc ggcctcgacc caggtcgcgc catgcatgtc caccaggaga
     5461 ggatgggcgc ctgcctcgag cctctggtcc gacacgtaga ggaacccgac gccgcgcggc
     5521 ccccgaagga atttgcgggc cgcggctgcc aggtagtcgc acccgaggag ttgcacgtcg
     5581 atcggcattt gacctacgac ctgacacccg tcgaccagat agggtacacc cgcttcctgg
     5641 cagatacgtc ctacggcttc gaccggttga accaagccgg aattggtcgg cacccaggtg
     5701 agggcgacga gcgcgggccg gcgccgggag accagccgcc gcactgcatc cggatcgatg
     5761 ccaccctcgg ctgcgtccgg tgcccggacg acctcgaccc cacgtcgccg ggcaagcgaa
     5821 agaaacatga tctggttgga ggcgtagtcc gagcgactgg tcagcacgac gtccccgggt
     5881 tcgaagtcga aggcgctgat cgcctgggcg taggcgacgg tggagttctg gaccacggcg
     5941 atattgcgag cccgtgctcc cagcaggcag gccacgctgt cgtaggcggc gtgaagctgc
     6001 gccgcttgat cttccgccgc ctcgtagccc cccagctgtt cctccaggtc gagatgggca
     6061 tcgatggtat cgcgaacggt acgcggcacc agggccgcgc cggcgttgtt gaggtggatc
     6121 aagtgctcgc agcctggagt ctccgcccgc cagcgcgcga gatcagaagc agaagctacc
     6181 gtcatccttc gatccaggcg ccgagctcct cgatgccccg ttgccagtga tggctgaaac
     6241 gctgcattgc ggtgtcccga tcgtttcgcc tgagtgcctc gacgatcctg gcatggtgct
     6301 gagtcgaaag gctcactcgg ccggcctcac gcaggaacgc ccgcatgtac cgtcggggca
     6361 cctgccaaag ggtagaaatc atcgcgcgga gcctaaggtt ggggcagcct tcgaggagcg
     6421 tccgatgcca ctcctcgtcc aggtcgatgc accgatctac gtcgcccctg gtggcggcca
     6481 gctcacggtc gatctcaccg aggcgagcca accgtccggg cgggatgtcg ccggagagct
     6541 ggagggccaa cccctccagg gtggagagga tcgcgccggt ctcccgcatc tcggtggcct
     6601 ccagtggccg tacgctgaag ccgcggccca tgtcggcctc gagaacgccc tcccgggaca
     6661 gccgaagcaa ggcctcgcgg acgggtgttc ggctcactcc caactgggcc gcgagatcgg
     6721 tgtcgcggac ccggcccgca gggggaagat ctccccggta gatccgggtg aggacggcct
     6781 gatagacctg gtctcgaagc ggggtacgtg tgatcatgtg cccatatcgc ggattagtat
     6841 actgtataca atattctcag acgccgggca aggtcgcctg gctacgctca ccccctgaga
     6901 acgggggcta ctgctccagc ttcgcgtcca gatcaaactg gacgttcccc tgcagg
//
LOCUS       DASYRV010000026         2263 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2087102, whole genome shotgun sequence.
ACCESSION   DASYRV010000026 DASYRV010000000
VERSION     DASYRV010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2263
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2087102"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            168..983
                     /locus_tag="VGQ24_00575"
     CDS             168..983
                     /locus_tag="VGQ24_00575"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8453348.1"
                     /translation="MSAGATAARSTRRVLRRPDVRFGAAWRLWQRNAAIYKRTYKLNI
                     IPNFFEPFFYLLAIGLGLGAYLSTIQGVRYMDFIAPGLLATAAMFGASFEVTFNAFVK
                     LHFGKIYDAAMSTPLTPEDIALGEILWGTTRAFIYGMVFLAIAAFFGVVHTPFVVLAP
                     LATILVGMMFSVIGLTFTAVIPHIDYYTYYWTMFLTPMFLFSGIFFPLDRLPRWFQTA
                     AWFAPLHQAVRLMRALLLTGDVGEMLAAGVWIVVVTGGLFILPVNLLRRRLVH"
     gene            989..1675
                     /locus_tag="VGQ24_00580"
     CDS             989..1675
                     /locus_tag="VGQ24_00580"
                     /inference="COORDINATES: protein motif:HMM:NF015146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEV8453349.1"
                     /translation="MDRRRELAALTAEIVECRKCPRLVAWREEVALVPPKRYAGWDYW
                     ARPVPGFGDPDARVLIVGLAPAAHGGNRTGRIFTGDRSGDWLVRALHRAGLANQPTSE
                     HRDDGLRLEGAYIAAVNRCCPPGNRPTPVERDNCVPYLVRELELLETARVLVCLGSFA
                     WDGALRAIATLDHVAPRPRPRFAHGREAQVGPYTLLGSYHPSQQNTFTGKLTDEMFDA
                     VFARARELAG"
     gene            1959..2195
                     /locus_tag="VGQ24_00585"
     CDS             1959..2195
                     /locus_tag="VGQ24_00585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453350.1"
                     /translation="MGFAVVFFTGERWLYFEGLAFALVGLGLIAPTRGNLERRQQQIT
                     AQGSPLSLIEALRNSPPGRTASPSLRPSGRILAG"
BASE COUNT          307 a          719 c          788 g          449 t
ORIGIN      
        1 gcggaccggg tggatcgtct ctccgatcgc tggctcttct acacgagcca aggagaggag
       61 ctcctggcga agatccggat ggtcgtgtcg gatcccgggg cagtgtggct tcgcggggcc
      121 acgctcgagg atgtgttcct ccggctcacc ggaagagggc tgcgcgagtg agcgccggtg
      181 ccactgcggc tcgctccacc aggcgagtcc ttcgccggcc ggatgttcgc ttcggcgccg
      241 cgtggcggct gtggcagcgg aacgcggcaa tctacaagcg gacctacaag ctgaacatca
      301 tccccaactt cttcgagccg ttcttctacc tgctggccat cgggctcggg ctgggcgcgt
      361 acctgtcgac gatccagggg gtccggtaca tggacttcat tgcgcccggg ctgctggcca
      421 ccgcggccat gttcggggcg tccttcgagg tgacgttcaa cgccttcgtg aagctccact
      481 tcgggaagat ctatgacgcc gcgatgtcta ccccgctgac cccggaggac atcgctctcg
      541 gggagatcct gtgggggacg acccgagcgt tcatctatgg gatggtgttc ctggcgatcg
      601 ccgccttctt cggggtggtg cacacgccgt tcgtggtgct ggccccgctg gcgacgatcc
      661 tcgtcgggat gatgttctcg gtgatcgggc tgacgttcac cgcggtcatc ccgcacatcg
      721 actactacac ctattactgg acgatgttcc ttacgccgat gtttctgttc tcggggatct
      781 tcttcccgct ggaccggctc ccaaggtggt tccagacggc cgcgtggttc gctcctctgc
      841 accaggccgt gcggctgatg cgggcgctcc tgctcaccgg tgacgtgggt gagatgctcg
      901 ccgccggtgt gtggatcgtg gtcgtcaccg gggggctgtt catcctcccc gtcaacctgc
      961 tgcggcgccg gctggtccac taggcggcgt ggatcgtcgc cgggagctcg ccgcgctcac
     1021 cgcggagatc gtggagtgcc ggaagtgccc tcgattggtc gcctggcggg aggaggtcgc
     1081 gcttgtcccg ccgaagcggt acgcgggatg ggattactgg gcccgcccgg tgcccggctt
     1141 cggcgacccc gatgcgcgag tcctgatcgt ggggctggcc cccgcggctc acggcggcaa
     1201 ccgcactggg cggatcttca cgggggaccg ctcgggtgac tggctggtcc gcgctctgca
     1261 ccgcgccgga ttggcgaacc agccgacgtc ggagcaccgc gacgacgggc tgcggctgga
     1321 gggcgcatac atcgccgcag tgaaccggtg ttgtccgccg ggaaaccgcc cgacgcccgt
     1381 ggagcgggac aactgcgtgc cgtacctcgt ccgggagctg gagctgttgg agacggcacg
     1441 cgtgctggtg tgtctggggt cgttcgcctg ggacggcgcg ttgcgcgcga tcgcgaccct
     1501 ggatcacgtc gcgccgaggc ccagaccgag gttcgctcac gggcgcgagg cccaggtcgg
     1561 cccgtacacg ctcctgggct cgtaccatcc gagccagcag aacacgttca ccggcaagct
     1621 caccgacgag atgttcgacg ccgtcttcgc ccgagcgagg gagctagcag gatgaaacgc
     1681 caagcagatg ggctgacggc cgtccgttta gtcttcgcgg ggatcgtcct tgctttgttg
     1741 ctgttcgtgt acgtgcgtat gtgatcacgt cacatgacgg tggcgccgga gccccgtcgt
     1801 gggtggcggt tggtctggcc gcatacgggt tggccgcgct cgccgctggc tcgtgggcac
     1861 ggtcgagacc cttggagacg tccgatgcca cgaggttggc gggctcctac cgaagcgcat
     1921 ttttcttggg catcggcttg gcagagtcgg cagcgttggt gggtttcgct gtcgtctttt
     1981 tcacaggtga gcgctggctc tacttcgagg gactcgcctt cgccctcgtg ggattggggt
     2041 tgatcgcgcc gacgagaggc aatctggagc gccggcaaca gcagatcacc gcccagggat
     2101 ctccgctttc tctcatcgag gccctgcgga acagtccgcc cggccggact gcctcgccgt
     2161 cgctaaggcc atcgggtcgt atcctggctg ggtgagtcga ggtgggttcg gtagtacctt
     2221 ctatggtcgt atgagccacc accgcctgat catcccggac ccc
//
LOCUS       DASYRV010000027         5438 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_427142, whole genome shotgun sequence.
ACCESSION   DASYRV010000027 DASYRV010000000
VERSION     DASYRV010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5438)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5438)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5438
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427142"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            292..1644
                     /locus_tag="VGQ24_00590"
     CDS             292..1644
                     /locus_tag="VGQ24_00590"
                     /inference="COORDINATES: protein motif:HMM:NF016311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase N-terminal domain-containing
                     protein"
                     /protein_id="HEV8453351.1"
                     /translation="MPTTSWGYRAALRLGTALAPTLGRFDRKIRTGDHARRGAGDRLL
                     EWARWNRDAARPLAWFHAASVGEGLQAESVLRHFRQLRPDCQTIYTHFSPSAEALARR
                     LEVDAADYLPYDLPDTMRRLLESLEPDLLAFAKLDVWPELSTRAATTGAQVAIVAATV
                     SPGSTRLHWPARWLLEAGYQVIAAAAAISPEDADRLAQLGVPAERIQVLGDPRFDSVA
                     ERVCAVDPDEPLLRFGQGAPTMVAGSTWLPDEEVLLGAFAHLYRSRPDTRLILVPHEP
                     TRAHLEALERRAASLGLPPPVRLSDAQEPAPLIVVDRIGVLATLYGSGTMAYVGGGFG
                     TAGLHSVLEPAAWGLPVAFGPRWRNSRDAALLLKAGAGTALPHSGMGRARVALQQHWE
                     KWIVDEEGRRAQGRRAREVVERGLGASARSAEMLAGLISARPLRRSPRAARSAPPSTQ
                     "
     gene            complement(1577..1897)
                     /locus_tag="VGQ24_00595"
     CDS             complement(1577..1897)
                     /locus_tag="VGQ24_00595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453352.1"
                     /translation="MSLPGCATTFDARTLGVPVTLASPAGQPPEGSRFSVTSHAVYAL
                     WGLAKLKEPSLRKALAAQIAGGTGVADLKIKVRSRWSDVLITALTAGLIVPRAVTFEG
                     VVLK"
     gene            complement(1954..2634)
                     /locus_tag="VGQ24_00600"
     CDS             complement(1954..2634)
                     /locus_tag="VGQ24_00600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453353.1"
                     /translation="MKHSVQGAARVGALMLGLVAWAPYVAAQVRGIPVYNSGVPRGIA
                     IYGDVGFSNDNAGKGTAFGVSGRAGFGPLGATAILSTFNPDGAGSSDVSVGATLNYKM
                     FGGPLVPLSVTLQGGIGYSKPDTGVLPGSDVTELHFPVGVGFALTIPNPALAIRPWIA
                     PRLDIVRTSLSGTSSTDTNFGLGGGLELNLLNGFGIHAAYDRVFVDGADPGVFGLGAH
                     YAFRVPGL"
     gene            complement(2784..3404)
                     /locus_tag="VGQ24_00605"
     CDS             complement(2784..3404)
                     /locus_tag="VGQ24_00605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453354.1"
                     /translation="MRRSLYGGLLAAALVTVAVDGLAAQETGTPMFKAPYRAFTSHEF
                     GAAFSDPGEGVNFALEGFYSYGRGSNDFGLRAGIADPDGPGDTRLLLGGDFRARILSY
                     SESFPLDGALTVGAGINLGDGDDLIYLPLGITLGRRFELEGSKTTFTPYAHPTLIPVL
                     GAAGGDDVGFALGLGVDLRFSQQWAVRVSGGVGDLEGVGIALTYVQ"
     gene            complement(3394..3654)
                     /gene="atpC"
                     /locus_tag="VGQ24_00610"
     CDS             complement(3394..3654)
                     /gene="atpC"
                     /locus_tag="VGQ24_00610"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit epsilon"
                     /protein_id="HEV8453355.1"
                     /translation="MQVTVISPEASMFDGEADAVVAPAFDGQVGILPNHAPFMTLLGE
                     GTLTVRRAGTASRFFIRGGFLQVVDNRVRVVTEHVQGDSHAS"
     gene            complement(3654..5099)
                     /gene="atpD"
                     /locus_tag="VGQ24_00615"
     CDS             complement(3654..5099)
                     /gene="atpD"
                     /locus_tag="VGQ24_00615"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020045332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEV8453356.1"
                     /translation="MATTATERAGEQGRTSTGRVVRIIGPVVDVEFAPDELPAIQNAL
                     TVERTLDGETIVITCEVAQHIGDATVRAIAMQPTDGLVRGTPVTNTGEPMTMPVGEKT
                     LGHVFDVLGHALDDPDFEAEERWPIHRDPPDFAELEPKKEMLETGIKVIDLLEPYVQG
                     GKIGMFGGAGVGKTVIIQEMIRRQAEQHGGVSVFAGVGERTREGNDLFLDMKETGVIN
                     KTARVFGQMDEPPGVRLRVGLAALTVAEYFRDVERKDVLLFIDNIFRFTQAGSEVSAL
                     LGRMPSAVGYQPTLATEMGDLQERITSTNKGSITSVQAIYVPADDLTDPAPATAFAHL
                     DATVVLSRAIAELGIYPAVDPLDSASRILDPQYVGPKHYEVAIGVQRILQRYKALQDI
                     IAILGMDELSEEDKLIVARARRIARFLSQPFFVAEQFTGFPGKYVKLEDTISSFERVV
                     AGEFDHLPEQAFYMQGSIDDVIKRGEQLASA"
     gene            complement(5105..>5438)
                     /locus_tag="VGQ24_00620"
     CDS             complement(5105..>5438)
                     /locus_tag="VGQ24_00620"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF012456.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEV8453357.1"
                     /translation="VARRFVPLVIQETEERPPEPIPQYLFEPSPERLLDALLPRYLQA
                     RVFTAMLEAAASEHASRRRAMKAATDNAEDLIEDLTREYNQARQAQITQEIMEIVGGA
                     EALQSTGS"
BASE COUNT          910 a         1849 c         1804 g          875 t
ORIGIN      
        1 agcgcggtgc ccgggcctcg tgccagtatc tggacgcggt ggaattggtc atgggatgca
       61 gaggtaatac aaaaaagggg ccgctcttcg cggcccccca ggttcgaagt gtcgcctggg
      121 tcccagcttg cagctcgaac taccggccgc aggcgaccct tgactctgta gacaatggat
      181 cacctcctcg gttgcaggtg gaacaggtac tgccgaagga attttagctg ggtccctcga
      241 tggggagcaa gagccttcct tttgggcctg ggtagcagca acattgccgc catgcccacc
      301 acgtcctggg gttaccgagc ggccctacgc ctcgggactg ccctcgctcc gactctcggg
      361 cgcttcgacc gcaagatccg gacgggcgac cacgccaggc ggggtgcggg agaccggctc
      421 ctcgaatggg cccgctggaa ccgcgatgcc gcccgaccgc tggcctggtt ccatgccgca
      481 tcggtcggcg aagggctcca ggccgagagc gtgctccgcc atttccgcca gctccgtcca
      541 gactgccaga ccatctacac ccatttcagc ccatcggccg aggctctggc ccggcgcctg
      601 gaggtcgatg ccgcggacta cctgccgtac gatctgcccg acaccatgcg acggctgctc
      661 gaatcgctgg agccggacct cctcgcgttt gccaagctgg atgtgtggcc cgagctgtcg
      721 acgagggcag ccacgaccgg cgctcaggtc gccatcgtag ctgcaacggt gagcccggga
      781 agcactcggc tccactggcc ggcccgctgg ctcctggaag cggggtacca ggtgatcgcg
      841 gcggcggcgg ccatatcgcc cgaagacgcc gatcgactcg cgcagctcgg tgtcccggca
      901 gagcgaatcc aggtcctggg cgatccccga ttcgacagcg tcgccgagcg ggtgtgcgcc
      961 gtcgatcccg atgagccgtt gctccgattc ggccaggggg caccaaccat ggtggcgggc
     1021 tccacctggc ttccggatga ggaggtgctg ctcggagcgt ttgcccacct gtaccgaagc
     1081 cggcctgaca ctcgcctgat cctggttccc cacgagccga cgcgggcaca cctcgaggcg
     1141 ctcgagcgcc gggccgcgtc gctcggctta ccacctccgg ttcgcctcag cgacgctcag
     1201 gaaccggcgc cgctcatcgt cgtggaccgg atcggcgtgc tcgcgaccct ctacggcagc
     1261 ggcacaatgg cctacgtcgg cggcgggttc gggacggcag ggctccactc ggtgctcgag
     1321 ccggccgcgt ggggacttcc ggtggcgttc gggccgcgct ggcgaaacag ccgtgacgca
     1381 gcgctcctgc tcaaagccgg cgctggcaca gcactgcctc actccggcat gggaagggca
     1441 agggtcgcgc tgcagcaaca ctgggagaag tggatcgtcg atgaggaggg gcggagggct
     1501 cagggccggc gtgcgcgtga ggtggtggag cgcgggctgg gcgcatcggc ccgcagtgca
     1561 gagatgctgg ccgggcttat ttcagcacga ccccttcgaa ggtcaccgcg cgcggcacga
     1621 tcagccccgc cgtcaacgca gtgatgagaa cgtcgctcca gcggctccgc accttgatct
     1681 tgagatcggc gacaccggtg ccgccggcga tctgcgcagc gagcgccttg cggagcgagg
     1741 gctccttgag cttggccagt ccccagagcg catagacggc gtgagaggtc acggagaagc
     1801 ggcttccctc cggtggctgg cccgcggggg acgcgagcgt caccggaacg ccgagcgttc
     1861 tggcatcgaa cgtcgtggcg cagccgggga gcgacacaca gaccaggaat acgagcgcta
     1921 ccgcaacccc tgttctggaa gcccgccaac acctcacagc ccgggaaccc ggaacgcgta
     1981 gtgagccccg agtccgaaga cgccgggatc tgctccatcc acgaacaccc ggtcgtacgc
     2041 ggcgtggatc ccgaacccgt tgagcaggtt gagctcgagt cctccaccaa ggccaaagtt
     2101 ggtgtcggta ctcgaggtgc ctgacaacga cgtgcggacg atgtccagcc gcggcgcaat
     2161 ccatggcctg atggcgagcg ccggatttgg aatggtgagc gcgaacccca ctcccacggg
     2221 aaagtgcagc tcggtaacgt cactgccggg aagcaccccg gtgtccggct tcgagtagcc
     2281 aatccccccc tgcaaggtga ccgagagagg aaccagcgga ccaccgaaca tcttgtagtt
     2341 cagcgtggcc ccgaccgaga catcgctgct gccggcgccg tcaggattga acgtcgacag
     2401 gatcgcggtg gccccaagcg gcccgaaccc cgcgcggccg ctcacgccga atgctgtacc
     2461 cttgcccgcg ttgtcattgg agaatccgac gtcaccgtag atcgcgatgc cccgcggcac
     2521 tccgctgttg tacaccggta tgccgcgcac ctgggcggcc acatacggcg cccaggccac
     2581 aagcccaagc atcagggctc cgacgcgggc ggccccttgc acgctgtgct tcatgctgtc
     2641 tccgtacgta aggaagaggc ggacgctgcg acccgagcgg cgccacaagg tactcgcagc
     2701 gttcgagcca agtcaatccg acagtcgcga caacgcccgc ccgcagcggg tgcggacggg
     2761 cggagatgta ggttgggttg gagctactgc acgtatgtca gcgcgatgcc gacgccttcg
     2821 agatcaccga ctccgccgct cactcgcacc gcccactgct ggctgaatcg aaggtcaacg
     2881 cccaggccca gcgcgaaacc gacatcgtcg ccgccggcgg cgccaagcac cggaatcagc
     2941 gttgggtgcg cgtagggggt gaaggtcgtt ttagaccctt ccagctcgaa gcggcggccc
     3001 agggtgatcc ccagcggcag gtagatgaga tcgtcgccat caccgaggtt gataccggcg
     3061 ccgaccgtga gcgccccatc gaggggaaag ctttcgctgt agctcagaat gcgagcccga
     3121 aagtcaccgc cgagcaggag gcgggtatcg ccggggccgt cgggatcggc gataccggcg
     3181 cggaggccga agtcattgga gccccgtccg taactataga acccctcgag agcaaagttg
     3241 acgccctcac ccggatcgga gaaggcggcg ccgaactcat ggctggtgaa ggcacgatac
     3301 ggcgccttga acatcggagt gcccgtctcc tgcgctgcca agccgtccac cgccaccgtg
     3361 accaacgcgg ccgccaagag cccaccgtat aggctacgac gcatgagagt ctccttgaac
     3421 gtgttccgtg accacgcgca cccggttgtc taccacctgc aggaaccccc cacggatgaa
     3481 gaagcgactg gcagtgccgg cacgccggac cgtcagagta ccctcgccga gcagcgtcat
     3541 gaacggtgcg tgattcggca gtatgccgac ctgcccgtcg aaggccggcg cgacgaccgc
     3601 gtccgcctca ccgtcgaaca tagaagcctc aggggagatc accgtgacct gcatcacgcg
     3661 ctcgcgagct gttcgccgcg cttgattacg tcatcgatgc tgccctgcat gtagaacgcc
     3721 tgctccggca aatggtcgaa ctcgccggca acgacgcgct cgaaactgga gatcgtgtcc
     3781 tcgagcttga cgtatttgcc agggaatccg gtgaactgct cagccacgaa aaacggctgc
     3841 gagaggaacc gggcgatgcg ccgcgcccgg gcgacgatga gcttatcctc ttcgctcagc
     3901 tcgtccatcc ccagaatggc gatgatgtcc tgcagcgcct tgtagcgctg gagaatgcgt
     3961 tgcacgccga tggcgacctc gtaatgcttg ggtcccacgt actggggatc gaggatgcgg
     4021 cttgcgctgt cgagcgggtc cacggcggga tagatgccaa gctccgcgat ggcgcgcgag
     4081 agcaccacgg tggcgtcgag atgcgcgaac gcggtggcgg gtgctggatc ggtcagatcg
     4141 tccgccggca catagatcgc ctgcaccgag gtgatcgagc ctttgttggt cgaggtgatc
     4201 cgctcctgca gatcgcccat ctccgtcgcc agggtcggct ggtagcctac cgcgctgggc
     4261 atccggccga gcagcgcgga gacctcggat ccggcctggg tgaaccggaa gatgttgtcg
     4321 atgaagagca ggacgtcctt ccgctcgaca tcgcggaagt actccgccac ggtcagggcg
     4381 gccagcccga cccgcagccg cacccccggc ggctcatcca tctgcccgaa cacccgcgcg
     4441 gtcttgttga tcacgccggt ttccttcatg tccaggaaca ggtcgttgcc ctcgcgggtc
     4501 cgctcgccga caccggcgaa cacggacacg ccgccgtgct gctcggcctg acggcggatc
     4561 atctcctgga tgatgactgt cttgccgacg ccggcgccgc cgaacatccc gatcttcccg
     4621 ccctggacgt agggctccag cagatcgatc accttgatcc cggtctccag catctccttc
     4681 ttgggctcga gctcggcgaa gtccggcgga tcgcggtgga tcggccagcg ctcctcggcc
     4741 tcgaagtcgg ggtcgtcgag ggcgtggccg agcacgtcga acacgtgccc gagggtcttc
     4801 tcccccaccg gcatagtcat cggctcgccg gtgttagtca ccggcgtgcc cctgaccagc
     4861 ccgtcggtgg gctgcatggc gatcgcccgc acggtggcgt cgccgatgtg ctgcgccacc
     4921 tcgcaggtga tcacgatggt ctcgccgtcg agggtccgtt ccacggtgag ggcgttctgg
     4981 atggcgggca gctcgtcggg ggcgaactcg acgtccacca ccgggccgat gatccgcacc
     5041 acccgcccgg tgctcgtccg tccctgctcg cctgcccgct cggtcgcggt ggtcgccatg
     5101 tcgctcaact cccggtgctc tggagggctt cggcgccccc gacgatctcc atgatctcct
     5161 gggtgatctg ggcctgccgc gcctggttgt actcgcgggt caggtcctcg atcaggtcct
     5221 cggcgttgtc ggtggcggcc ttcatcgccc ggcgcctgga ggcgtgctcg gaggccgccg
     5281 cctccagcat ggcggtgaac accctggcct ggaggtagcg cggcagcagc gcgtccagca
     5341 gccgctcggg gctcggctcg aacaggtact gcgggatcgg ctccggcggg cgctcctcgg
     5401 tctcctggat caccagcggg acgaaccggc gcgccacc
//
LOCUS       DASYRV010000028         4149 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1875294, whole genome shotgun sequence.
ACCESSION   DASYRV010000028 DASYRV010000000
VERSION     DASYRV010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4149
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1875294"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1940
                     /locus_tag="VGQ24_00625"
     CDS             <1..1940
                     /locus_tag="VGQ24_00625"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEV8453358.1"
                     /translation="VLPYVTTRAEYMGHDVADPFNDGSRLGAGIGGDLKVGIGSNLTL
                     DATVNPDFGQVEVDPAVVNLSDVETFFEERRPFFVEGASIFNYGEGGANDFWGFNWAS
                     PNFLYSRRIGRAPQAELPDDYDYSNVPAGSNIIGAAKVSGKVGSWSLGALNAITSREH
                     AQFSLGQQRWRQEVEPLTYYGVYRAQKELAGGRHGLGFIGTLTARSLDEPQLRRELSS
                     SAIGFGLDGWTTLDKNAVWVVSSWAGMSRVRGTPERMQSLQQSSVHYFQRPDAGYLGV
                     DSSGTSLTGYAARVSLNKQKGNWMFNSAIGVVDPNFEVNDLGFQFRGDQINSHLMFGH
                     KWTKPGRLFRSWRLNFAGFRSYNYGGDVTWTGLFLTGLYELRNFSTGRWFVAYNPSTM
                     SDRRTRGGPLMINQPGVEWDFQLDSDPNKRWIYGLGLHGTHYREDWDQSWSARAALEW
                     KPGARLSLRIEPQIERTATSAQYVDTFDDVLAASTFGHRYVFADLSQTTVSASVRLNW
                     IFTPRLSLEVYAQPLLSSGQYTGFKELARPRSYQFTGYPDPAETADPDRIVVDPDGPA
                     GPAPAHEIDDPNFSLASLRGNAVLRWEYSPGSTLFLVWTQNRKDTETIGSFRTGRAFD
                     RLFGASADNIFLVKVSYWWNP"
     gene            2677..3756
                     /locus_tag="VGQ24_00630"
     CDS             2677..3756
                     /locus_tag="VGQ24_00630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453359.1"
                     /translation="MPTTQHLTILFIGLLAACGAPKPEAPVIELTFAGDTLATPYSDV
                     TAAAWLGGNRWAVLAPADEAVAIVDFGTKTLTPLGGRSSKSLRNPSNLFVAGDTLYVG
                     DWGLRRLTLWTPSGRLVRSIPAANAVRGTLPRARDRAGYFYLELTPQPGPDGSGNRDS
                     AAVVRVDTSFIRGDTLARLAPLDIAEVQGDAGRRFERRVFSGVDRWGVLPDGSLWLGR
                     VYDNRVDWRGPDGRWSRGQPLPDRVLEVTRYDRELFLRKFPPELRRTAEDLPFAAIKP
                     PFEAGMTAARGDVWLEKSRAPPDSSRRYHVVNRQGRLVREIRVPGQGYVLAIGANSAL
                     AAEPAAQGIRLIRVGLPSSSTSPAP"
     gene            3800..>4149
                     /locus_tag="VGQ24_00635"
     CDS             3800..>4149
                     /locus_tag="VGQ24_00635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453360.1"
                     /translation="MKLQHSLSLLALVASFACSSARSQTLALDTRLPARFGNLSNVIE
                     LSDGRVLFADTKNKLFLRGDLKSGKVDTIGSRVDSLSKRNSVGEYRFPGWVAHLAGDS
                     VALVDFSAIRTTLW"
BASE COUNT          746 a         1289 c         1327 g          787 t
ORIGIN      
        1 aagttcttcc ctatgtgacc acgcgagccg aatacatggg tcacgacgta gcagacccgt
       61 tcaacgacgg ctctcgattg ggcgccggca tcgggggaga tcttaaggtg ggcatcggga
      121 gcaacctgac actcgacgcc actgtgaacc cggactttgg gcaggtcgag gtggatcctg
      181 cagtagtcaa tttgagcgac gtcgagacct ttttcgagga gcgccggccg ttcttcgtgg
      241 agggggccag catcttcaat tacggggaag gcggcgccaa tgatttctgg ggtttcaact
      301 gggccagccc caattttctg tacagtcgcc gcatcggtcg ggcacctcag gccgagctgc
      361 ccgacgacta tgactactcg aacgtgccgg cggggagcaa catcatcggc gcagccaagg
      421 tttcggggaa ggtggggagc tggagcctcg gcgccctcaa cgccataacc agccgggagc
      481 atgcccagtt ctcgttgggt cagcagcgct ggaggcagga ggtcgagcct ctcacctact
      541 atggcgtgta tcgggcccag aaggagttgg ctggtggccg gcatgggctg ggattcattg
      601 gcacgctgac ggcgcgctcg ttggatgagc cccagctccg gcgggagctc agctccagcg
      661 ccattgggtt tgggctcgac gggtggacta ccctggacaa gaacgcggtg tgggttgtca
      721 gcagctgggc cggcatgagc cgggtgcgcg gaactcccga gcgaatgcag tcgctccagc
      781 aaagctcggt gcactacttc cagcgccccg acgccggcta tctcggggtc gactcgagtg
      841 ggacgtccct caccggctac gccgcccggg tttcgctcaa caagcagaag ggcaactgga
      901 tgttcaactc ggccatcggc gtggtggacc cgaatttcga ggtgaacgac cttggcttcc
      961 agttccgggg cgaccagatc aactcccacc tgatgttcgg gcacaagtgg accaagccgg
     1021 gtcggctgtt ccggagctgg aggctcaact tcgccggttt caggagctac aactacggcg
     1081 gcgacgttac ctggaccggg ttgtttctga ccgggttgta cgagctgagg aacttctcga
     1141 ccggccggtg gttcgtggcc tacaacccca gcacgatgag tgaccggcgg acccgcggtg
     1201 ggccgctcat gatcaaccag ccgggcgtgg agtgggactt tcagctcgac tccgatccca
     1261 acaagcgttg gatctacggt ctcgggcttc acggcactca ctaccgggaa gattgggatc
     1321 agagctggag cgcgagggcg gcgctcgagt ggaagccggg cgcacggctg tcgcttcgga
     1381 tcgagccgca gatagaacgc acggctacgt cggcccagta cgtggatacc ttcgacgatg
     1441 tgctggcggc gagcaccttc gggcaccggt acgtgttcgc cgacttgagc cagaccacgg
     1501 tgtcggccag cgtgcggctg aattggatct tcaccccgcg actcagtctc gaggtgtatg
     1561 cccagccgct gctttcctcg gggcagtaca ccgggttcaa ggagctggcg cggcctcgca
     1621 gctaccagtt taccggttac ccggatccgg ccgagacagc cgatcccgac cgtatcgtgg
     1681 ttgacccgga tggacccgcg gggccggcgc cggcccatga gatcgatgac ccgaacttct
     1741 ccctggcgtc cctccggggg aatgcggtgc tccgctggga gtattcgccg ggctccacac
     1801 tgttcctcgt atggacgcag aatcggaagg atacggaaac catcggcagc ttccggaccg
     1861 gccgcgcatt cgatcggctg ttcggcgcca gcgcggacaa catcttcctg gtaaaggtgt
     1921 cgtactggtg gaacccctaa atctgtgggc ccgcacggct gtgcgggtta cccgtatttc
     1981 aaaggattgt tctggatgta ggtgcgaata ccatccaatt ccccctcatt cctaatcaca
     2041 tgttcgtgat agttgctctg ccaaattgca cgcccaggtg atccgcgcag tgtattaatc
     2101 cgcctggtgg tagcggattt gaacccagcc atcagtgagc ctagagagcg gggatgcctg
     2161 cgaaggcaga cgccggggtt attggcggtc ccaccagtct cacacacgtt cccctcatca
     2221 ctccccgata ggacgacgat tccatggaag tggtccggca tcacgacaaa ggcatcgagt
     2281 gcgacttcct gacgcagaag ctggcccctt aaccactctt cctcaacgat tcgcccgtat
     2341 cgattgagca ggactcgacc cgatcccatc tcgccaaata gccacgaccg ttggaacgcg
     2401 ttcgtggtga cgaaataagc tccaccggac ctatagtcat gccccgataa ccgcggtggc
     2461 ctgccatgtt tccaatcgag gtggtctctc gacacaggaa attcctggtg acgaggcttg
     2521 cccgcacggc cgtgcgggcc cacctgccca cagcaagccc caaggaactc acagatcttg
     2581 gaatttgtgg catcctttcg tcgcatgcat cggccgaatc gcgcatcacg tgcgccgcca
     2641 cccaggccat gcacggaccc cgattacatt cccccggtgc ccaccaccca acacctgacg
     2701 attctcttca tcgggctact cgccgcctgt ggagcgccga agcccgaagc accggtgatc
     2761 gagctgacgt tcgccggcga taccctggca accccctact ctgacgtaac cgcggccgcg
     2821 tggttgggtg gaaatcgctg ggcagtgctg gcgccggcag acgaggccgt tgccatcgtc
     2881 gatttcggca ccaagacact gacgccactg ggcggtcgat cgtcgaagtc gctgcggaat
     2941 ccctccaatc tcttcgtggc cggcgacacc ctgtacgtcg gcgactgggg actccgccgg
     3001 ctcacgctct ggactccaag cgggcggctg gtacgctcta ttcctgccgc caacgccgta
     3061 cgggggacgc tgccccgagc gcgtgaccgt gcgggctact tctatctcga gctcacccct
     3121 cagcccggcc ccgacgggag tgggaatcgc gactccgcgg ctgtcgtgcg agtcgacacc
     3181 tcattcattc ggggcgacac gctcgcgcgg ctcgcgccgc tcgacatcgc ggaagtgcag
     3241 ggcgacgctg ggcgacgatt cgagcgccgg gtgttcagtg gggtggaccg ctggggtgtg
     3301 ctgcccgatg gctcactctg gctgggaaga gtctatgaca accgggtaga ttggcgtggg
     3361 ccggatggcc gatggagccg tggtcagccg ctgcccgacc gggtcctgga ggtgacgcgt
     3421 tacgatcgtg agcttttcct gcgcaaattc cctccggagc ttcggcgaac cgcggaggat
     3481 ctgccgtttg ccgcgatcaa gccgccattc gaggccggaa tgaccgccgc ccgcggggac
     3541 gtgtggctgg agaagagtcg ggcgccgccg gattcttcac gccggtatca tgtggtaaat
     3601 cggcagggcc ggctggtacg ggagatccgg gttcctggcc aagggtatgt gctagccata
     3661 ggagccaact cggcgctggc ggccgagccg gcggcgcagg gcatccggct gatccgcgtc
     3721 ggcctcccgt cctcctcgac aagcccggcg ccgtaacctc actcactgaa gtcgcgttcg
     3781 cccccggagg gttggtcgga tgaagctgca gcactcactg tctctactcg cgctggtggc
     3841 atcgttcgca tgcagttcgg cccggagtca gactctggct ctcgacacca ggctaccggc
     3901 acgcttcggc aatctcagca acgtcatcga gctgagcgat ggacgggtat tgttcgccga
     3961 taccaagaac aagctctttc ttcggggcga cctgaaaagc gggaaagtgg acaccatcgg
     4021 gagccgtgtt gactccttat ccaagaggaa ctccgtcggt gagtaccggt ttccgggatg
     4081 ggtggctcat ctggcaggag atagcgtggc cctggtggac tttagtgcga tccgcaccac
     4141 gctatggag
//
LOCUS       DASYRV010000029         2333 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2089087, whole genome shotgun sequence.
ACCESSION   DASYRV010000029 DASYRV010000000
VERSION     DASYRV010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2089087"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..311
                     /locus_tag="VGQ24_00640"
     CDS             <1..311
                     /locus_tag="VGQ24_00640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453361.1"
                     /translation="AWGTFGANANNKRVKFKFGASSLTFFDSGYNNLTWFVSVLIVRT
                     GATGQEIAGYSLVPTNVVGTARATGAETLSGAITIQFTGEATADSDILQHGMIVEGLN
                     "
     gene            312..521
                     /locus_tag="VGQ24_00645"
     CDS             312..521
                     /locus_tag="VGQ24_00645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453362.1"
                     /translation="MDLSTDDLALLRTALTEYLESVLPSVGRHFLAGSDQVDHIKVRA
                     IVLRAKLAHETKRLNLEAAQEKEPA"
     gene            522..740
                     /locus_tag="VGQ24_00650"
     CDS             522..740
                     /locus_tag="VGQ24_00650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453363.1"
                     /translation="MAALSGHQYAWITARCGVLRCGTGRAAAVGDAEQIYLTDGTGHY
                     AGEFKYSEASGDTDPEDAPSTTYTSVAR"
     gene            737..1414
                     /locus_tag="VGQ24_00655"
     CDS             737..1414
                     /locus_tag="VGQ24_00655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453364.1"
                     /translation="MNLSSMRGMLTRLLQDTASTPEWSVAEKDELINLGLLEAETRVL
                     VVDPAAFISVDTFDQVANQERYDKPAGFLFEYELAIKDSGQATGWRALPRGTYRGTRG
                     RVASATVEYASLGRYFYLSPIPSTSVDEGFRLTWVYPISVSADSDVPLLALPLHRAAV
                     DWATGLALAETSEREAMDAAFARAEKAFERIPVYYRRSRVPQGITPLVRDAASRLRLA
                     RDVYLSG"
     gene            1411..>2333
                     /locus_tag="VGQ24_00660"
     CDS             1411..>2333
                     /locus_tag="VGQ24_00660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453365.1"
                     /translation="MKKYKAALTDFSGGLNDSFDPSAIGAAYSSKLENLYLRGPHIYR
                     RNGIPKYAGGFAERVTGLFAYGKEVGNWLLIAGLQSGLSSVVAGAPVALSNLDSVSIP
                     SSDDPWRMRQYKNVGYTVRAGVLGLLRFTDTGFSLAGIDKPATAPTIAAVAGGTMEAG
                     ARHVVMTFVNLDTDVESNPSSDSNSATLVANDRISVTNAAVSSNPQVTGRRFYVELAD
                     IPGQYYLALETTDLTSTSFILDKQIKDLGALASFRNARPAQVEYIDLEVWKERLWLAT
                     GVDLLYSENIAGVGLAECFAAANFIPIFPDDR"
BASE COUNT          414 a          760 c          742 g          417 t
ORIGIN      
        1 ctgcatgggg cacctttggt gcgaatgcca acaacaagcg ggtgaagttc aagttcggag
       61 cgtcatccct gaccttcttc gactccggct acaacaacct gacttggttt gtcagcgttt
      121 tgattgtgag gacaggggcc accgggcaag agatcgccgg ctactcgctc gtaccgacca
      181 acgtcgtggg aaccgctcgc gcgaccggcg cggagacgct gtcgggcgcg atcacgatcc
      241 agttcacggg tgaggcgact gccgatagcg acatcctcca gcacggaatg atcgtggagg
      301 gcctgaacta aatggatctc tctaccgacg acctcgcctt gctccgtacg gctctcacgg
      361 agtacctgga gtccgtcctg cccagtgtgg gccggcattt cctcgccggc tccgatcagg
      421 tggaccacat caaggttcga gcgatcgtgc tccgggcgaa actggcccac gaaaccaagc
      481 ggctcaacct ggaagccgcc caggagaagg agccggcgta gatggctgct ctttccggcc
      541 atcagtacgc ctggatcacc gcacggtgcg gtgtcctccg ttgcggtacc ggccgggccg
      601 cagcggtcgg tgatgcggag cagatttacc tgacggacgg cacgggtcac tacgcgggcg
      661 agttcaagta cagcgaggcc agcggcgaca ccgatcccga agacgctccc tccactacct
      721 atacgagcgt agcccggtga acctcagctc catgcggggc atgctgactc ggctgttgca
      781 ggacaccgcc tccacgccag agtggagcgt tgcagagaag gacgagttga tcaacctcgg
      841 cctgctcgag gcagagacgc gggtgctcgt cgtcgatccg gccgccttca tctccgtgga
      901 caccttcgat caggtggcga atcaagagcg ctacgacaag ccggctgggt tcctgttcga
      961 gtacgagctg gcaatcaagg actccggtca ggctacgggc tggcgagcgc ttccacgtgg
     1021 aacctaccgg ggaaccaggg gccgggtggc gagcgccacc gtggagtacg cctccctcgg
     1081 tcgctatttc tacttatctc ccatcccatc cacgagcgtg gacgagggct tccgtctcac
     1141 ctgggtctac ccgatcagcg tatctgccga cagtgatgtg cccctgctcg ccttgcccct
     1201 gcaccgggcg gcggtggact gggcgacggg gctggccctg gcggaaacct cggagagaga
     1261 ggccatggat gccgccttcg cgcgggcgga gaaggcgttc gagcgcatcc cggtctacta
     1321 ccggcggtcg cgggtgccgc aggggatcac gccgctggtg agggacgccg cgtcccggct
     1381 ccgcttggcg cgggacgtct atttgtcggg atgaagaagt acaaggccgc cctcacggat
     1441 ttcagcggcg gattgaacga ctcttttgac ccctccgcca tcggcgcggc ctattcctcc
     1501 aagctggaaa acctctacct ccgcggaccc catatctacc gccggaacgg catccccaag
     1561 tacgcggggg gatttgcgga gcgagtgacc ggcctcttcg cctacggcaa ggaggtcggg
     1621 aattggctgc tcatcgccgg cctccagagc gggctgtcca gcgtggtggc gggggcgccg
     1681 gtggcgctgt ccaacctcga ttccgtctca atcccctctt cggacgatcc ctggcggatg
     1741 cgtcagtaca agaacgtggg ctataccgtc cgggccggcg tcctaggctt gctgcgcttc
     1801 accgacaccg ggttttccct ggccgggatc gacaagcccg ccaccgcccc gaccatcgcc
     1861 gccgtagccg gcgggaccat ggaagcggga gcgcggcacg tcgtgatgac gttcgtgaac
     1921 ctcgacaccg acgtggagag caacccctcc tcggactcca actccgccac cctggtcgcc
     1981 aacgaccgca tctcggtcac gaacgcggca gtatcaagca atccccaggt gacggggcgg
     2041 cgcttctacg tggagttggc cgacatcccc ggccagtact atctggccct ggagacgacc
     2101 gatctcacca gcacgtcgtt catcctcgac aagcagatca aggacttggg ggccttggcg
     2161 agcttcagga acgcccggcc ggctcaggtg gagtacatcg acctcgaggt ctggaaggaa
     2221 cggctgtggc tcgccaccgg ggttgatctg ttgtattccg agaacatcgc cggggtgggc
     2281 ttggcagagt gctttgccgc tgccaatttc atccccatct tccccgacga ccg
//
LOCUS       DASYRV010000030         3735 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_13070, whole genome shotgun sequence.
ACCESSION   DASYRV010000030 DASYRV010000000
VERSION     DASYRV010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3735
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13070"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(25..624)
                     /locus_tag="VGQ24_00665"
     CDS             complement(25..624)
                     /locus_tag="VGQ24_00665"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEV8453366.1"
                     /translation="MADRIVAFAGSLRRGSYNRALIQAAQELAPDGMTIEPVETVELP
                     FYNADVEAEGDPPAVAAFKAALRQAHGILIATPEYNDGIPAVLTNAIDWGSRLPGRSP
                     LMGKPIAVMGASPSQIGTARAQLHLRQLLAHVQARVLPPPELLVARAHERFDAGLRLK
                     DEGTRRVLADLLVRFSRWIRREQAAAEAERELATKAPSK"
     gene            complement(617..796)
                     /locus_tag="VGQ24_00670"
     CDS             complement(617..796)
                     /locus_tag="VGQ24_00670"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEV8453367.1"
                     /translation="MIDYPAGWTCERTLMRLEYYLLGTLSLAESLAVAEHLEACDGCS
                     QRLVLYRPTLAVSRG"
     gene            complement(815..1159)
                     /locus_tag="VGQ24_00675"
     CDS             complement(815..1159)
                     /locus_tag="VGQ24_00675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453368.1"
                     /translation="MGGQGAYYALTGLWPILHLSSFEAVTGPKVDDWLVHTVGLLATA
                     IGIVLGIAALRGEARTLTAVGLAAGSALAFAGIDLWYGLGGRISPIYLADAVVQLGWL
                     VLLGLTQSTKPS"
     gene            complement(1220..1732)
                     /locus_tag="VGQ24_00680"
     CDS             complement(1220..1732)
                     /locus_tag="VGQ24_00680"
                     /inference="COORDINATES: protein motif:HMM:NF017758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEV8453369.1"
                     /translation="MSLDSLEKLFVEEVRDIYNAEKQLLRALPRMAKAAQSADLSQAF
                     TKHLKETEGHVQRLERIFRDLGQAVRGKQCKGMVGLIEEGKEKLEEKGEGAVLDAALI
                     TSAQKVEHYEIAAYGCLRTYAQLLGYSQAGKLLEQTLAEEEAADKKLTELAEGGINDA
                     AAAAGKEIEA"
     gene            complement(2008..3087)
                     /locus_tag="VGQ24_00685"
     CDS             complement(2008..3087)
                     /locus_tag="VGQ24_00685"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEV8453370.1"
                     /translation="MIFGFSREAESPAWIERGASLALLAAVLFGLSAPFAKGLLRDAE
                     PQLLAGLLYLGSGAGLAAAWLFRRRRRGEASLSRHDLPWLASAIAAGGILGPLLLLLG
                     LERTPASSASLLLNLEGVFTALFAWFLFQENFDRRIALGMLAIVAGGAVISWDGRVAW
                     GGMTGPLLIAAACLCWAIDNNLTQRVSASDPVQIAMLKGITAGAVNTGLAVWLGAAWP
                     GTGRVGAALLLGFLSYGLSLVLFVLALRHLGTARTGAYFSVAPFVGAAVAILGFGERP
                     TALFVVGAALMLLGVWLHLTERHLHEHTHHALEHEHAHVHDEHHRHAHRPEDPPGEPH
                     THPHRHEPLTHTHRHYPDVHHRHPH"
     gene            complement(3084..3359)
                     /locus_tag="VGQ24_00690"
     CDS             complement(3084..3359)
                     /locus_tag="VGQ24_00690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453371.1"
                     /translation="MRVTSEYAVGSEPDVLAFDPRLQRLYVASESGVVTAFSELAGRL
                     KVLGTYTAPGAHSVAVNPVTQEVYLPLANIGGRPVLRILVPADSLRQ"
     gene            complement(3350..>3735)
                     /locus_tag="VGQ24_00695"
     CDS             complement(3350..>3735)
                     /locus_tag="VGQ24_00695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453372.1"
                     /translation="PGMPGVTGVLVVPSIGRVFAALSGSGQVAVLDAQTARVLERIPG
                     GRFPDGLAFAPEVGKVFVSDEFGRREIVIDASTNRRRATIPLGGEAGNTQYDSVGWQM
                     PLVGWPSSQTRGMGSSWSSISERCG"
BASE COUNT          670 a         1251 c         1194 g          620 t
ORIGIN      
        1 actcagtggg agaaggctga gtgactactt agagggcgcc ttcgtcgcta gctcccgctc
       61 tgcctcagcc gccgcctgct cccgtcggat ccaccggctg aaccgcacca atagatcggc
      121 gagcacccgg cgggtgccct cgtccttgag ccggagcccg gcgtcgaacc gctcgtgcgc
      181 tctggcgacc aggagctcgg gcggcgggag gacgcgggcc tgcacgtggg ccaggagctg
      241 tcggaggtgg agctgcgccc gcgccgtccc gatctggctg ggcgaggcgc ccatgacggc
      301 gatcggcttc cccatcaatg gagagcggcc gggcaggcgg gacccccagt cgatcgcgtt
      361 cgtcagcacc gccgggattc cgtcgttgta ctcgggagtc gcgatgagga tgccgtgggc
      421 ctggcggagc gccgccttga aggcggccac agcgggagga tcgccttccg cctccacgtc
      481 ggcattatag aacgggagct cgacggtctc gaccggctcg atcgtcatgc cgtcgggggc
      541 gagctcctgt gcggcctgaa tcagggcgcg gttgtaggag ccgcgcctga ggctcccggc
      601 aaaagcaacg atccggtcag ccacgggaga cggcgagcgt cgggcgatag agtacgaggc
      661 gctgggaaca cccgtcgcag gcctccaggt gctcggcgac cgcgagcgac tccgcgagcg
      721 aaagcgtgcc gaggagatag tactcgagtc gcatcagggt tcgttcgcag gtccagccgg
      781 cgggatagtc tatcatcgcg gagcctcaat tccttcacga tggcttggtg gactgcgtca
      841 gaccaagcag cacgagccat ccgagttgaa cgaccgcgtc agccagataa atcggtgaga
      901 tgcgcccccc gagcccgtac cacagatcta ttccggcgaa tgccagggcg gagcccgcgg
      961 cgaggcccac cgccgtgagg gtacgagctt ccccgcgcag cgcggcgatc cccagcacga
     1021 tcccgatcgc ggtcgccagc aggccgaccg tatggaccag ccagtcatcc accttgggcc
     1081 ccgtgacggc ctcgaagctg gagaggtgaa ggatcggcca gagacccgtc agcgcatagt
     1141 acgcgccctg accccccatg acgatcggcc gccaacggcc ccgccgttca tcgatcggcc
     1201 ttcgaaatcg gctcagcgac tacgcctcga tttctttgcc ggctgcggct gccgcgtcgt
     1261 tgatgccacc ctcggccagc tccgtcagct tcttgtcggc ggcctcttcc tcggccaggg
     1321 tttgctccag tagcttgcct gcctggctat agcccaggag ttgggcgtac gtgcgaaggc
     1381 atccataggc ggcgatctca tagtgctcca ccttctgcgc cgaggtgatc agggcggcgt
     1441 cgagcacagc tccttcgccc ttctcctcca gcttttcctt accctcctcg atcaatccca
     1501 ccattccctt gcactgcttg ccccgaacgg cctggcccag gtcccggaag atcctttcca
     1561 ggcgctgcac gtgcccctcg gtttccttca gatgcttggt aaacgcctgg ctgaggtcag
     1621 ccgattgagc cgccttggcc atgcggggaa gggccctgag gagctgcttc tcggcgttgt
     1681 agatgtctct cacctcttcc acaaacagtt tttccagcga atcgaggctc atcgggctac
     1741 tcctgagcga agggtctgtc ggcaattggc caagagtccc agtatcgcgg actctgtcgg
     1801 ccacaataaa tcggcagagt ctggggcgat gtgatgccaa tcccctcgcc atacgctctc
     1861 ggcgatcaat cggctgaacc gctccaggtc gacgagcacc cgacccgtgc catcgtcgcg
     1921 gagccggagc ccggcgtcga accgcttgtg cgccaggaat tacccgaacc gaacgtatgg
     1981 ggcggaggta tcctcgttgg cctggtatca gtggggatgc cggtggtgaa cgtcaggata
     2041 gtgtcggtgc gtgtgcgtta gtggttcgtg tcgatgcggg tgcgtgtgcg gctcgccagg
     2101 agggtcctcg ggccggtgtg cgtgtcggtg atgctcatcg tggacatggg catgttcgtg
     2161 ctcgagggcg tggtgcgtgt gctcgtgcag gtgacgctcg gtgaggtgga gccacacgcc
     2221 caacagcatg agtgccgcgc cgactacgaa aagagccgtc ggacgttcgc cgaatcccag
     2281 aatggccacg gcggcgccga caaaaggggc gacggagaag taagcgccgg tccgcgcagt
     2341 cccgagatgg cggagcgcca gcacgaagag gaccaggctc aagccgtagc tcaggaagcc
     2401 gagcagaagc gccgcaccga cgcgtccagt gcccggccac gcagctccga gccagactgc
     2461 cagtcccgtg ttcacggctc ctgcggtaat gcccttcagc atcgcgatct gaaccggatc
     2521 gctggccgag accctctgcg tgaggttgtt gtcgatggcc cagcagaggc aggcagccgc
     2581 tatcagcagt ggccccgtca tccctcccca ggcgacacgc ccgtcccagg agatcactgc
     2641 gccaccggcg acaatcgcca gcataccgag cgcgatcctg cggtcgaagt tctcctgaaa
     2701 caggaaccag gcaaacaacg cggtgaacac tccctcgaga ttgagcagca gcgatgcgct
     2761 cgatgccggg gtccgctcca atccgagcaa tagtagcaaa ggccccagga taccgcccgc
     2821 cgcgatggcg gaggcgagcc agggcagatc atgtcgtgaa agggaagcct ctcctctgcg
     2881 gcgtcggcga aaaagccagg cggccgccaa ccctgcgccc gagcccagat agagcagtcc
     2941 cgccagcagc tgcggctcgg catctcgcaa cagccccttg gcaaaaggag cgctcagacc
     3001 aaacaggacc gccgcgagca gcgcgagtga tgctccgcgc tctatccaag cggggctctc
     3061 tgcctcgcgc gagaatccga agatcattgc cgaagagaat ccgctggcac caaaatgcgc
     3121 agtaccggcc gccctccgat gttggccagc ggaaggtaga cttcctgcgt caccgggttc
     3181 acggccaccg agtgagcccc tggcgctgta tacgtcccta ggactttcag ccgccctgca
     3241 agctccgaga atgcggtcac cactcctgac tccgaggcca cgtacagccg ctgtagccga
     3301 gggtcaaacg ccaggacgtc cggctcgctt cccaccgcat actctgaggt cacccgcatc
     3361 gctctgagat cgacgaccag gagcttccca ttcccctcgt ttgcgacgaa ggccagccga
     3421 cgaggggcat ctgccagccg accgagtcgt attgcgtgtt cccagcttcg ccaccgagag
     3481 ggatcgttgc tcgccttcga ttggtcgagg catcgatcac gatctcgcgc cgtccgaatt
     3541 catccgacac gaagaccttc cctacctcgg gagcaaaggc gaggccgtcc gggaagcggc
     3601 cgcccggtat ccgctcgagc acccgagcgg tttgggcgtc cagcaccgcg acctggccgc
     3661 tgccgctcag cgccgcgaat acccggccga tgctcggtac cacgagcacg ccggtgacac
     3721 cgggcatgcc gggca
//
LOCUS       DASYRV010000031         4064 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1258610, whole genome shotgun sequence.
ACCESSION   DASYRV010000031 DASYRV010000000
VERSION     DASYRV010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4064
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1258610"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(630..1166)
                     /locus_tag="VGQ24_00700"
     CDS             complement(630..1166)
                     /locus_tag="VGQ24_00700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453373.1"
                     /translation="MRSIFSLPLMALVAVVAGCGSTAREQAAPSSPQRDLTLVSQTAQ
                     VEIASPVELRQVRAARRPPARRSSPLEPRVELPAVAAPFVALGTGSAPVLAAPERVAQ
                     PAGTASTSDNSRELPPGKTVTVIPASSGPSIDPDRTDELPVAQGRTMVARGGGGACRG
                     RGRGPGIGIAGAPRPDFR"
     gene            1448..1621
                     /locus_tag="VGQ24_00705"
     CDS             1448..1621
                     /locus_tag="VGQ24_00705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453374.1"
                     /translation="MRRLLLVVGGFLLLLILLVGGALAALKTQAVRDRIAAALSSALG
                     QPATIGQEIGIAY"
     gene            1877..2497
                     /gene="mtnB"
                     /locus_tag="VGQ24_00710"
     CDS             1877..2497
                     /gene="mtnB"
                     /locus_tag="VGQ24_00710"
                     /EC_number="4.2.1.109"
                     /inference="COORDINATES: protein motif:HMM:TIGR03328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016835 - carbon-oxygen lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylthioribulose 1-phosphate dehydratase"
                     /protein_id="HEV8453375.1"
                     /translation="MSFAELAGQLAEIGRQCYARGWALGTSGNFSAVVNRDPLRLAIT
                     SSGVDKGTLSVGEIVEIDQHGKVVAGSGRLSAEASLHLAIARARGAGAVLHTHSIWST
                     ILSDAATEDGLAIQGYEMLKGLDGVGTHEHREWLPILDNTQDWAAAVPQVEAMLTEHP
                     NAHGFLIRRHGLYTWGRDLAEARRQMEILEFLFEVMGRKRGMTWQP"
     gene            2485..3054
                     /locus_tag="VGQ24_00715"
     CDS             2485..3054
                     /locus_tag="VGQ24_00715"
                     /inference="COORDINATES: protein motif:HMM:NF015065.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEV8453376.1"
                     /translation="MATVRIPDEQRTLTDQDEVTRYLATLGIDYERWPDTERVPQQAA
                     AEEVLAAYGPEIEQLKALGGYVTADVIDVTAQTPNLEAMLDKFRTEHWHDEDEVRFIV
                     RGRGLFHVHPKDGGPVIAIEVEAGDLIRVPRGTWHWFDLCGDRDIRAIRLFQDKSGWT
                     PHYTESGADRGYQPLCMGPAYIPLRTASS"
     gene            3069..3764
                     /gene="mtnC"
                     /locus_tag="VGQ24_00720"
     CDS             3069..3764
                     /gene="mtnC"
                     /locus_tag="VGQ24_00720"
                     /EC_number="3.1.3.77"
                     /inference="COORDINATES: protein motif:HMM:TIGR01691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_function: GO:0016862 - intramolecular oxidoreductase
                     activity, interconverting keto- and enol-groups [Evidence
                     IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acireductone synthase"
                     /protein_id="HEV8453377.1"
                     /translation="MLLDIEGTTTPLAFVHQTLFGYARARVSGFLQRHWNDPEVRADL
                     ARLQAEHAAETSQPAPPPGRDDPAAVAAYVHWLMDRDRKSTGLKSLQGKIWEEGYRAG
                     DLRGEVYPDVPPALERWRRQGIDIAIFSSGSVQAQRSLFANTAAGDLTHFIRAYFDTT
                     TGPKTAPHSYGRIAAALERPPSEVLFLSDVGAELDAALAAGMRTALCVRTPGSAPPAG
                     AHPVIHAFDQLPG"
BASE COUNT          699 a         1346 c         1328 g          691 t
ORIGIN      
        1 ggcgccggag atccgccaag aactccattc cactggtcgg cgtcggcgaa gtcgaggctg
       61 taccgggaaa tgccagcgtg agagcagtcg cgacttccat ccagacgaag acctccctca
      121 ttccccgggc attccacggc aggagtgcct atctcagtca cgaccagcga ccggcggttc
      181 ccaggcaagg gcaatgtgaa gtttggttgc accactactc ggccgaagcc gacacttagg
      241 tcgctatgcg cttcaattgt cgccgtgccg gaagtcaggg ccgtaaccag acctgtctgt
      301 gacacggaca cgatgtccgg tacactgctg gaccattgga cctcgcgacc cggcagcagc
      361 cgaccctcgt ggtcctgcac cgtcgcctgg agcagtgcgg ttgcaccgat ggtcaggact
      421 aactcggctg gcgttagggt aatctggacc ccagggatgg tttgaatacc cgcggagtcg
      481 tctccacatg ccgagacggt ctgagctgcg gttatgacca ggaatgtgcg gaacaagtgc
      541 gacatcgcgg gagtacgagc catgctataa cggtggggaa ttgtacttgc ggtggcaact
      601 agaggctcct cggagcctaa atgggtgatc tatcggaaat ccggacgagg agcaccggcg
      661 atcccgatac ccggtccccg gccacgacca cgacatgcac ctcctccgcc ccgtgccacc
      721 atcgtgcggc cttgtgctac gggaagctca tcggtcctgt ccgggtcgat cgaggggcca
      781 ctgctcgcag gaatcaccgt aacggtcttc ccgggtggga gctcccgact gttgtccgag
      841 gtcgatgccg tgccggcggg ctgggctact cgttcgggag cggcgaggac gggcgcagag
      901 cctgtcccga gcgcaacgaa gggtgccgcc accgccggga gctccactcg gggctcgagg
      961 ggactggaac gtcgggccgg aggccgccga gctgcccgaa cctgccgcag ctccaccggg
     1021 gaggcgatct ccacttgagc ggtctggctc accagcgtga gatcccgctg tggtgaggag
     1081 ggtgccgcct gctcccttgc cgtggacccg caccccgcga cgactgccac caaagccatg
     1141 agcgggagcg aaaagatgct gcgcatgaat cctccagggg cggaactgcc gatttctccg
     1201 atgtaggacg aggaggcggg cctcattcac acttcctggt gcgttgcaat ccgggacacc
     1261 gttcctcccg atccgcatcg aagccctgct atagtgagcc cgggctgcgg caaccggatc
     1321 gacctggccc ttccgcgatc gggggagcat tccaatccaa gccgccggcc tcccgatttc
     1381 ctagaatgtg cgtcgggtcg gtccgctggc ggtccgcata ccccttggac tgggatctgg
     1441 aagtgacgtg cgtcgtctgt tactcgtggt cgggggattt ctgctcctgc tcatcctgct
     1501 ggtgggcggc gcgctggcgg cgctgaagac gcaggcggtg cgcgatcgca tcgcggccgc
     1561 gctctcgagc gcgttggggc agccggcgac gatcggacag gagatcggga tagcgtactg
     1621 aggcggacgg acaggcggac gggcggacgg gcggacagga aaatgctcct cagctcgcca
     1681 ggaaggtcgg agtaaggcgg gcgaggtccc tcccctcact ttgttcgggg tcgggatgag
     1741 gagttttctt ccattccgac tgcccgtccc cccgtccccc catccgcctg tacgcctgtc
     1801 cgcctgtcat ctaccgccgc ttcatctacc gccgccgttt ctaccgccgc ttccatctac
     1861 cgcctatcct tgacgcatga gcttcgccga gctggccggc caactcgccg agatcgggcg
     1921 ccagtgttac gcccgcggct gggcgctggg cacgagcggt aacttcagcg cggtggtgaa
     1981 tcgcgacccc ttgcgtctcg ctatcacgtc cagcggagtg gacaagggca ccctctcggt
     2041 cggcgagatc gtcgagatcg accagcacgg gaaggtcgtg gcgggatcgg gccggctctc
     2101 ggccgaggcc agtctccatc tcgcgatcgc gcgggcacgg ggagccgggg cggtgttgca
     2161 tacccattcg atttggagca caattctttc ggatgccgcc accgaggacg gcctggccat
     2221 ccaagggtac gagatgctaa agggtctgga cggcgtgggc acgcacgagc accgcgaatg
     2281 gctgcccatt ctcgacaaca cccaggattg ggccgccgcg gtaccgcagg tcgaggcgat
     2341 gctgaccgaa cacccgaacg cgcacgggtt tctgatccgc cggcatgggc tctacacctg
     2401 gggccgcgac ctcgccgagg cgaggcgcca aatggagatt ctggagttct tgttcgaagt
     2461 gatggggcga aagcgaggca tgacatggca accgtgagga tccccgacga gcagcgcacc
     2521 ttgaccgatc aggacgaggt gacgcgatac ctggcgaccc tgggcatcga ctacgaacgc
     2581 tggccggaca cggagcgggt gccgcagcag gcagcggccg aggaagtgct ggcggcatac
     2641 gggccggaga tcgagcagct caaggcactc ggcggctacg tcacggccga cgtgatcgac
     2701 gtgacggccc agacgccgaa cctcgaggca atgctggaca aattccggac ggaacactgg
     2761 cacgacgagg atgaggtgcg cttcatcgtt cgcgggcggg gcctgtttca cgtgcacccc
     2821 aaggacggcg gccctgtcat cgcgatcgag gtggaagcgg gtgacctgat ccgggtcccc
     2881 cgcggcacgt ggcactggtt cgatctgtgc ggcgaccggg acatccgggc catccgactc
     2941 ttccaggaca aatcgggttg gacgccccac tacacggaga gcggcgccga tcggggttac
     3001 cagccgctct gtatgggtcc cgcctacatt ccgctccgga ctgcgtcgag ctgacgagcg
     3061 tcggcgccgt gctcctggac atcgagggca cgaccacgcc cctcgcattc gtccaccaaa
     3121 cgctgttcgg ctatgcgcgc gcccgagtga gcggatttct ccagcggcat tggaatgatc
     3181 ccgaggtccg cgccgacctc gcgcgactcc aagccgagca cgctgccgaa acctctcaac
     3241 ctgcccctcc gccggggcgc gatgaccccg ctgcggtcgc tgcctacgtg cactggttga
     3301 tggatcggga ccggaagtcg acggggctga agtccctgca aggcaagatc tgggaggagg
     3361 ggtaccgggc gggcgacctg cggggtgagg tgtatcccga cgtcccccct gccctggagc
     3421 gttggcggcg tcagggaatc gacatcgcca ttttttcctc gggcagcgtc caggcgcaac
     3481 gatctttatt cgcgaacacg gccgccggcg atctgacgca tttcatccgc gcctattttg
     3541 acacgacgac cggaccgaag accgcgccgc acagctacgg gcgcatcgcg gcggccctcg
     3601 agcgcccccc ctccgaagtg ctctttctct ccgacgtcgg cgcggagctc gatgcggcac
     3661 ttgcggcagg catgcgaacg gcgttgtgcg tgcggacgcc gggatcggca ccgccggccg
     3721 gcgcgcaccc ggtcattcat gcgttcgatc agttgcccgg ctgatgtcac cctgagggac
     3781 cctgaacgaa gtgaaggcga ccgagggggc cggtcccctc cccttcgctg cgctcagggt
     3841 cagggtgaca acgcttcctt tgcgctcctt ccgccgcctc acctaccgcc ttaccgccct
     3901 accgcctcac cgcccgccga gcgacaccga ctccccaact tccaccgtcc gaaaccgctc
     3961 ggccggcaca ccgcgctccc gcaatgcctt tgacaactcc cgaaccggtt cgtcgatccc
     4021 ttccggcgtc aactgaaacg tgccgaagtg catggcgata ctct
//
LOCUS       DASYRV010000032         7346 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3543748, whole genome shotgun sequence.
ACCESSION   DASYRV010000032 DASYRV010000000
VERSION     DASYRV010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7346
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3543748"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            101..1114
                     /gene="trpS"
                     /locus_tag="VGQ24_00725"
     CDS             101..1114
                     /gene="trpS"
                     /locus_tag="VGQ24_00725"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEV8453378.1"
                     /translation="MPRIFSGIQPSGELHIGNWLGAVQNWVNLQRSYESLICVVDLHA
                     ITGKYDHASLAQRTRDMAISLLAAGIDPDRATLFVQSHVPEHTELAWLLNTVTPLGEL
                     ERMTQFKDKSQRFESVPVGLLNYPVLMAADILLYRADLVPVGDDQVQHLELTREIARK
                     WNAEFGRGIEFFPEPQPILTEAKRITGLDGQAKMSKSLGNTIGLLDTPEEIWQKLRPA
                     KTDPARVTRYDPGNPEICNIYHLHQYFSPPETVAVVAENCRGAKWGCLDCKRVLADNM
                     IATLAPIRERALRLQGEPERVDEILADGASTARRMASETMREVRDRMGLLPASGKRAV
                     EAQ"
     gene            1130..2233
                     /locus_tag="VGQ24_00730"
     CDS             1130..2233
                     /locus_tag="VGQ24_00730"
                     /inference="COORDINATES: protein motif:HMM:TIGR01420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEV8453379.1"
                     /translation="MMEKIIKAAVQRGASDLHIKAGDVFRARINGKLVPLTKQRLTPD
                     QTRAIALKLITSEEDRARIDRMRDFDCSWGMPGVGRFRVNVLRQRSSFMIVMRVIPFT
                     VPTIESLRLPEVLQSIAESDRGLVLVSGVAGSGKSSTVAAMVHHINRTLHKHVITIEN
                     PIEFLHRDLSCSITQREVGVDTESLAIGLRAALRQDPDVVVIGEIADTATLDTAIKAA
                     ETGHLVIATMTTPDVVTTVERVVAMLLAEEREIGRIRFAEEVHAIISQQLLPEKDDKG
                     RIAAVEILIATPAVRECLKDSSRLAQVKRIMADGHKELGTQTYDQHLEELIEADQISA
                     QTQRAALAMATPAGPVSVPIAYSRRGAGKSAAK"
     gene            2250..3326
                     /locus_tag="VGQ24_00735"
     CDS             2250..3326
                     /locus_tag="VGQ24_00735"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEV8453380.1"
                     /translation="MPTLEETSRQIITLPREAGTAEGAAARELVAAHLKELGYTVTFQ
                     KFTFAPSSIRAFPVFGDGLGLLALILFPLLGTSSVPAWAALAVWTGGLAATAVVAAGV
                     ALGWVPFGEAIREDANVIATRGEARPRRWIVAHLDSKAQAHSMAGRLVAVWITVVAVA
                     AVSGMAALRLNGPIAPVWLGLGGGTALLAGFLARKGRLHGRSLGARDNGTGVVAALAA
                     AEAAPASGLGILITGAEEFGLVGARVFARLTPDLQETEFVNVDTVDQEGMLYLVSHDA
                     RGERLARSIEPVLGRLGLPLRRRRLPLGIFVDSAPLSQTRAPSITIGRLTWRTLRRIH
                     TAADTPDDLSLDTAVQVGRAVAQL"
     gene            3454..4734
                     /locus_tag="VGQ24_00740"
     CDS             3454..4734
                     /locus_tag="VGQ24_00740"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEV8453381.1"
                     /translation="MFDARTTCMVVVGAQWGDEGKGKLVDVLAERADFVVRYQGGANA
                     GHTVVIGDTQFVLRQIPSGILHSRVTCVIGNGVVLEPENLFVELDQLRARGIDTTGRI
                     FVSDRAHLVMPYHKLLDAASERSQKLGTTGRGIGPAYEDKYGRRGIRVTDLRRLECAR
                     GLLADRVARANQLLELMGSAERAKLEEHNALLERLAPRLLPLAADTGLLVHRAIREGK
                     RVLLEGAQGALLDVDHGTYPYVTSSNTTAGGAAVGSGIGPTAINDVLGVVKAYTTRVG
                     NGPLPTEAASPYAEQLRELGGEFGAVTGRPRRCGWFDATVVRYAARVNGLTGLAVTKL
                     DVLDTLSEIPVGTMYRLDGRSCEEMPAEVDALGRVEPVYEMLPGWQQATGSARRLADL
                     PAAARAYLERLEALSGVPVRYVSVGTRRDQIIEV"
     gene            4754..5812
                     /locus_tag="VGQ24_00745"
     CDS             4754..5812
                     /locus_tag="VGQ24_00745"
                     /inference="COORDINATES: protein motif:HMM:TIGR04018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YpdA family putative bacillithiol disulfide
                     reductase"
                     /protein_id="HEV8453382.1"
                     /translation="MNSEETALLVIGAGPCGLAVGVAAKQAGVPCVLLDRRTIVSTIE
                     RYPLSMTFFSTPERIEIGAIPFISSHEKPNRRDGLIYYRRVAEHYGLDIRPGEDVVDV
                     ALSADSTSGRRFRIEVGRRHDDKTYHAGAIVFATGYYDNPNFLGVPGEDLPHVTHYFV
                     EGHPYWRQRVIVIGAGNSSVDAALESWRAGATVTLVHFGEGFDRTVKAWVLPDIVNRV
                     KEGSIAVRWRSRIRAITPTHVDVVSDLTGASEMLPADAVLAMTGYHADTALLQQLGVP
                     VDPATGVPAHDEASMATPVPGCYLAGVIASGNDANRLFIENARGHGEMIIQHLLQSRT
                     ILTPTPAQSANPTFASSR"
     gene            complement(5760..6914)
                     /locus_tag="VGQ24_00750"
     CDS             complement(5760..6914)
                     /locus_tag="VGQ24_00750"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEV8453383.1"
                     /translation="MSDPVRFLIAVSQALSTMGLYGDDHPATARALDNALERLRELQE
                     PNPKLHFTFLAGEVLVGSEMVHELEGWEWSARLVKAGIERIEFTDTVEPEQFARFLSH
                     LTIRLGIRSGSTSGDLWQMGESAIKFGQVALAEGFKKRISGSLPVAALTYTLREERET
                     VDWMHQEIREGCKLPMVEADAVVRSLSIAMHTEQAMVLPLLQLKEFDQYTTTHSMNVS
                     VLAMAMGEFLEVGAGTVRALGVAGLLHDLGKVCIPRDILVKPGQLTDAERLVVQDHPV
                     VGARMLLENPDPMELAAVVAYEHHVRLDGGGYPKLHDARGAQYASRIVHICDVYDALR
                     TTRPYRHAWESERAMAYIQDRAGVEFDPGIARSFIAMMRKWDSQIALASA"
     gene            complement(6911..>7346)
                     /locus_tag="VGQ24_00755"
     CDS             complement(6911..>7346)
                     /locus_tag="VGQ24_00755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453384.1"
                     /translation="EAIKLLLESPGHTTDGILLGLRDADDGVATMAATTAVESCPPAA
                     LPLLERITVDPERSPDLRAITLRILARTRAPEALRLLLALAMSRRLWFARGLAPKSPL
                     LLSALSALASHWREDPSATEILSLAQQHWDPEIRAAAGAGSS"
BASE COUNT         1285 a         2353 c         2441 g         1267 t
ORIGIN      
        1 taggaagccg cccgttctgc cgcggtctgg gccagttgca gtaagtgtaa ggcagacacg
       61 atcttgtgtg ccgattttga gaggggtaac ttgctccctc atgccacgca tattctcagg
      121 gattcagccg tccggcgagc tgcacatcgg caactggctg ggggccgtgc agaactgggt
      181 caacctccag cgcagctacg agtcgttgat atgcgtggtc gatctgcacg ccatcaccgg
      241 caagtacgat cacgcgtcac tcgcgcagcg cacccgcgac atggccatca gcttgctggc
      301 ggcggggatc gatcctgatc gggcgacgtt gttcgtccag tcgcacgtcc ccgagcacac
      361 cgagctcgcg tggctgctca ataccgtgac ccccctcggg gagctcgagc gcatgacgca
      421 gttcaaagat aagtcgcagc gattcgagag tgtgccggtc ggtcttttga actatccggt
      481 gctcatggcc gccgacatcc tgctctatcg cgccgacctc gtcccggtcg gcgacgatca
      541 ggtccagcac ctggagctga cccgtgagat cgcccgcaag tggaacgccg agttcggcag
      601 gggaatcgag ttcttccctg aaccgcagcc tatcctcacg gaggcgaagc ggatcaccgg
      661 gctggacggc caggccaaga tgtccaagag cctgggcaac accatcgggc tcctggacac
      721 cccggaagag atctggcaga agctgaggcc tgccaagacc gatccggccc gggtcacccg
      781 ctatgacccc gggaatccgg agatctgcaa catttatcat ctgcaccagt acttctcgcc
      841 gccggagacg gtagccgtgg tggcggagaa ctgccggggg gccaagtggg ggtgcctcga
      901 ctgtaagcgg gtgctggccg ataatatgat cgccaccctg gcccccatca gggagcgggc
      961 gctccggctc cagggagagc ccgagcgggt ggatgagatc ctggccgacg gcgcctcgac
     1021 agcccggcgc atggcctcag agaccatgcg ggaggtacgg gaccgcatgg ggttgcttcc
     1081 agccagcggg aaacgagcgg tcgaggcgca gtaaccgggg agtgggcaga tgatggaaaa
     1141 gatcatcaag gcggcggttc agcggggcgc ctcggacctg catatcaagg ccggcgacgt
     1201 ttttcgcgcg cgcatcaacg gtaagctggt tccgctcacc aagcagcgcc ttaccccgga
     1261 ccagaccaga gccatcgcgc tgaagctgat caccagtgag gaagatcgtg ctcgcatcga
     1321 ccggatgcgg gacttcgact gctcctgggg gatgccggga gtgggccggt tccgggtcaa
     1381 tgttctgcgg cagcgttcgt cgttcatgat cgtcatgcgg gtgatcccct tcacggtacc
     1441 caccatcgag tcgctgcggt tgcctgaggt gctgcagtcg attgccgaat ccgaccgcgg
     1501 cctcgtgctg gtgagcggtg tggccggaag cggcaaaagc tcgaccgtgg cagccatggt
     1561 gcaccacatc aaccggacgc tccacaagca tgtcatcacg atcgaaaatc ccatcgagtt
     1621 ccttcaccgg gacttgagtt gctcgatcac gcagcgtgaa gtcggagtgg acaccgagag
     1681 cctcgccatt ggtctccgcg ccgctcttcg acaggatccc gatgtcgtcg tgatcggcga
     1741 gatagccgac accgcgacct tagacacggc gatcaaggct gccgagaccg gccacctggt
     1801 catcgcgacg atgacgaccc cggatgtggt aaccacggta gagcgggtcg tcgcgatgct
     1861 gctggccgaa gagcgggaga ttggccggat acggttcgcc gaggaagtgc acgccatcat
     1921 ctcgcagcag ctccttcctg aaaaggacga caagggcagg atcgcggcgg tcgagatctt
     1981 gatcgccaca ccggccgtgc gcgaatgcct gaaggattcc agccgccttg cccaggtcaa
     2041 acgaatcatg gcggacgggc ataaggagct cggtacccag acctacgacc agcacctcga
     2101 agagttgatc gaggccgatc aaatcagcgc gcagacccag cgcgccgccc tggcgatggc
     2161 gacccccgcg ggccccgtga gcgtcccgat tgcctactcc agacgcgggg cgggaaaatc
     2221 ggccgcaaag tgagccgcga aacaggcacg tgccgacctt agaggaaacc tctcgccaga
     2281 ttatcaccct cccacgtgaa gccggaactg ctgaaggcgc ggccgctcga gagcttgtcg
     2341 ccgcccacct gaaggaactc ggctataccg tcaccttcca gaagttcacc ttcgctccct
     2401 cgagtatccg cgccttcccg gtcttcgggg atggtctcgg gctcctcgcc ctcattctgt
     2461 tccccctgct cggtaccagc agcgttcctg cctgggcggc cctggccgtg tggaccgggg
     2521 gccttgcggc cacagccgtt gtggcggctg gtgtcgcgct ggggtgggtg cccttcggcg
     2581 aggcgatcag ggaagacgcc aatgtgattg cgacccgggg cgaagcccgg ccccggcgct
     2641 ggatcgtggc acacctcgac tcgaaggcgc aggcgcattc catggccggg cgtctcgtgg
     2701 cggtgtggat caccgtagtc gccgttgccg cggtcagcgg catggctgcg ctccgcctca
     2761 acggccccat tgctccggtg tggctcggcc tgggtggcgg tacggcgctc ctggcgggtt
     2821 tcctggcgcg gaaaggccgg ctccatggcc gctcgctggg ggctcgggac aacgggacgg
     2881 gggtcgtcgc ggcgctggct gccgccgagg cggctccggc gtccggtctc ggaatcctca
     2941 tcaccggtgc ggaagagttc gggctggtcg gggcgcgggt attcgcccgg ctcacccccg
     3001 acctgcagga gacggagttc gtaaacgtgg acacggtcga tcaggaggga atgctgtacc
     3061 tggtgagtca cgatgcccga ggcgagcgcc tggcgcgcag catcgagccg gtgctcgggc
     3121 gcctcggcct gccactcagg cgccggcggc ttccgctcgg tatcttcgtc gacagtgctc
     3181 cgctctccca gacacgcgcg ccgtctatca cgattggacg cctgacctgg cgcaccctcc
     3241 gtcggattca tacggccgcc gacacgccgg atgacttgtc actcgacacc gcggtgcaag
     3301 ttggcagggc ggtggcacag ctatagcgcg accgggaccg aagcacccga acgaacttca
     3361 attgacgttt caacaggggc gagataggtt tgcccgagga ttcaggagcc ccgcaagggg
     3421 ctcttttgtt gtttcagacc gactggagca gacatgttcg acgccaggac cacctgcatg
     3481 gtggttgtcg gggcacagtg gggtgatgaa gggaaaggga agctggtgga cgtcctcgcc
     3541 gagcgggcag atttcgtcgt gcgataccag ggcggcgcca acgcgggcca taccgtcgtc
     3601 atcggcgaca cccagttcgt gctgcgacag attccctcgg gcatcctcca ttcccgggtt
     3661 acctgcgtca tcggcaacgg cgtcgtgctc gagccggaga atctttttgt cgagctggat
     3721 cagcttcggg cacgggggat cgataccacc gggcggatct tcgtctccga tcgggcccat
     3781 ctggtgatgc cgtaccacaa gctcctggac gccgccagcg agcggagcca gaagctcggc
     3841 accaccggtc gcggcatcgg gccggcctac gaagacaaat acgggcggcg gggcatccgg
     3901 gtcaccgatc tccggcgtct cgagtgcgcc cggggtttgc tggccgaccg ggtggcgcgg
     3961 gccaatcagc tactcgagct gatgggcagc gccgaacgcg ccaagctcga ggagcacaat
     4021 gccctgctcg agcgtctggc gccgcggctg cttccgctgg cggcggatac aggactcctg
     4081 gtgcatcgtg ccatccgcga ggggaaacgg gtcctgctgg agggagccca aggcgcgctg
     4141 ctggacgtgg atcacggcac ctacccctat gtgacctcgt ccaatactac ggccggcggc
     4201 gcggcggttg gatccggcat aggtccgacc gcgatcaacg acgtcctcgg tgtggtaaag
     4261 gcgtacacca cccgggtcgg taacgggccg ttaccgacgg aggcggcaag tccctacgcc
     4321 gagcagctcc gcgagctggg tggggagttc ggggccgtga ccggccggcc tcgccgctgt
     4381 ggctggttcg acgcgacggt tgtgcgctac gctgccaggg tcaacggact caccggcctc
     4441 gcggttacca agctcgatgt cctggacacc ctgtccgaga tcccggtcgg caccatgtac
     4501 cggctcgatg ggagatcgtg cgaggaaatg ccggccgagg tcgacgctct cggtcgcgtg
     4561 gagcccgtgt acgagatgct cccaggctgg cagcaggcta ccgggtcagc gcgccggctg
     4621 gccgatctac ccgcggctgc ccgggcctat ctggagcggt tggaggcgct ttccggggtg
     4681 ccggttcggt acgtgagcgt aggcacgagg cgcgaccaga tcatagaggt gtgacaaccg
     4741 tgaacggtga accgtgaaca gtgaagagac cgctctcctg gtgatcggcg ccggtccctg
     4801 cgggctggcg gtcggcgttg cggccaagca ggccggggta ccctgtgtgc tcctcgaccg
     4861 ccgcacgatc gtgtccacca tcgaacgcta tccgctcagc atgaccttct tctccactcc
     4921 ggagcggatc gagatcggcg ccatcccgtt catctccagc cacgagaagc ccaatcgcag
     4981 agacggtctc atttactatc gccgcgtggc ggagcactac ggcctcgata tccggcccgg
     5041 ggaggatgtc gtggatgtcg cgctgtctgc ggactcgacc agcggccgcc gatttcgcat
     5101 cgaggtcggc cggcgccacg acgacaagac ctatcacgcc ggcgccattg tattcgccac
     5161 cggatactac gataacccga attttctcgg tgttcccggg gaggacttgc cgcacgtcac
     5221 ccactatttc gtcgagggac atccctattg gcgccaacgc gtcattgtca tcggggcggg
     5281 gaacagcagc gtggatgcgg cactcgagtc ctggcgcgcc ggtgcgacgg tcactctggt
     5341 tcactttggc gagggcttcg atcggacggt aaaggcctgg gtcctgccgg acatcgtcaa
     5401 tcgggtgaag gaggggagca tcgccgtgcg ctggcggtca cgcatccggg ctatcacgcc
     5461 gactcatgtc gacgtggtct cggacctcac cggagcgtcg gagatgcttc ctgccgatgc
     5521 ggtgctcgcc atgaccggtt atcacgccga caccgcgttg ttgcagcagc tcggcgtacc
     5581 agtggacccc gccaccgggg tgccggctca cgacgaggcg tcgatggcga cgccggtgcc
     5641 tggatgctac ctggcggggg tgattgccag cgggaacgat gccaaccggc tttttatcga
     5701 gaatgcgcgg ggccacggtg agatgatcat ccagcacctg ctccagtcac gcaccatcct
     5761 tacgccgacg ccagcgcaat ctgcgaatcc cactttcgca tcatcgcgat gaacgatcgg
     5821 gcgatgcccg ggtcgaactc gaccccggcg cggtcctgga tgtaggccat ggcgcgctcg
     5881 gactcccagg cgtgccggta gggtcgagtg gtgcggagcg cgtcgtagac gtcgcagatg
     5941 tgcactatcc ggctagcata ctgcgcaccg cgcgcgtcgt ggagcttggg gtacccaccg
     6001 ccatccagcc ggacgtgatg ctcgtaggcc acaacggccg ccagctccat ggggtccgga
     6061 ttctccagca gcattctcgc cccgaccacg ggatggtcct gaacaaccag ccgttcggca
     6121 tcggtgagct gccccggttt gaccagaatg tcccggggga tgcagacctt ccccaggtca
     6181 tgtagcagcc ccgcgacgcc gagcgcgcga actgtccccg ctccaacctc cagaaactct
     6241 cccatggcca tcgcgagcac ggagacgttc atcgagtggg ttgtagtgta ctggtcgaac
     6301 tccttgagct gtagcaacgg cagcaccatg gcttgctcgg tgtgcatcgc gatcgaaagc
     6361 gaccgcacga cggcatccgc ctcaaccatc ggaagcttgc agccctcccg gatctcctga
     6421 tgcatccagt caaccgtctc ccgctcctct cgtagcgtat aggtgagggc tgccaccggg
     6481 agcgaccccg atatccgctt cttgaagccc tccgccaggg cgacctgacc gaacttgatc
     6541 gccgactcac ccatctgcca gaggtcgccg ctcgtcgatc cggaacggat gccgagccga
     6601 atcgtcaggt gggagagaaa gcgagcgaac tgctccggct ccacggtatc ggtgaactcg
     6661 atccgttcga tccctgcttt caccagtcgg gcgctccact cccacccctc gagctcgtgg
     6721 accatctcgg atccgaccag cacctcgccc gccagaaagg tgaagtgaag tttcgggttg
     6781 ggctcttgga gctcacggag gcgctccagg gcgttgtcca gggcgcgggc cgtggcgggg
     6841 tggtcgtccc cgtagagtcc catggtggac aaggcctggg ataccgcgat gagaaagcgg
     6901 accggatcgc tcatgacgat cctgcccccg ctgcggcacg gatctccgga tcccagtgtt
     6961 gctgggcaag gctcaggatc tcggtggcgg acgggtcctc ccgccaatgg ctggccagag
     7021 ccgagagtgc cgaaagaagc agtggggatt tgggggccag gcctcgggcg aaccagagcc
     7081 ggcgggacat tgccaaggcg agcagcaggc gaagtgcctc cggcgcacgg gttcgagcca
     7141 ggatccgaag ggtgatagcc cggagatccg gcgaccgttc cggatccacc gtgatacgct
     7201 ccagcaacgg cagtgccgcc ggaggacacg attcgactgc ggtcgtcgcc gccatggtcg
     7261 cgacgccgtc gtcggcgtca cgcaggccga gcaggatgcc atcggtggtg tgtccgggag
     7321 attcgagcaa caacttgatg gcttcg
//
LOCUS       DASYRV010000033         4458 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_13357, whole genome shotgun sequence.
ACCESSION   DASYRV010000033 DASYRV010000000
VERSION     DASYRV010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4458
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13357"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            109..435
                     /locus_tag="VGQ24_00760"
     CDS             109..435
                     /locus_tag="VGQ24_00760"
                     /inference="COORDINATES: protein motif:HMM:NF022517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2867 domain-containing protein"
                     /protein_id="HEV8453385.1"
                     /translation="MIRGTCSPANALDFWRVEAITPGSLLRLRAEMKLPGLAWLELAA
                     GRDHDGMTTYSQRAIFQPRGLAGHAYWRSISPFHGVIFGGMQRNITASAERAGRSADK
                     PAPAGH"
     gene            complement(630..1106)
                     /locus_tag="VGQ24_00765"
     CDS             complement(630..1106)
                     /locus_tag="VGQ24_00765"
                     /inference="COORDINATES: protein motif:HMM:NF024857.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEV8453386.1"
                     /translation="MRYAPRERFRSRPSREPGLLTMSPLTGRAGLRLDGEADLTSHHE
                     LQKALAALPPGAAEIHFELARLKFIDVAATRALIARTLQPPHPRLILHHPPPSLQRLI
                     HLLWPDTNAQFRFSPDSRFEYEPADTRARPGEAEPALLNHRLQRRSQPAERQPPRQ"
     gene            1285..1950
                     /locus_tag="VGQ24_00770"
     CDS             1285..1950
                     /locus_tag="VGQ24_00770"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEV8453387.1"
                     /translation="MSGTGRPIYSISAVARMVGVPVATIRTWEDRYDVVVPGRNASGH
                     RLYRRDQVEQLRFVRTCMADGASPADAHRLLAERIDAGLPLATPAGPRARLLILLAEG
                     DPYAAEFQEYFLKTEGFEVEVTLDEEAARKSFSERSPALVVVELLISGGAGLDLCRFF
                     REQGGDVLIIAVSVLESRDLAVEAGADAFLLKPLEPLQLVSTVRDLLGSSAFLRPVQE
                     PAP"
     gene            1947..3389
                     /locus_tag="VGQ24_00775"
     CDS             1947..3389
                     /locus_tag="VGQ24_00775"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HEV8453388.1"
                     /translation="MSDRLLSGHEPLDAVLGGGLPANAISIIMGLPGTGKTIIAQQYA
                     FQNGRPDRPAVYFSTVSEPLEKIVRFGQGLDFFDRAAIGRAVWYEDLGATVSNDGLGG
                     VARQIATVLKERHPGLIVIDSFKALHAFADSHSEFRRFLHELAGRLSVFPAASLWVGE
                     YDEAEVGSLPEFAVADAIVDLAIERIGHRGIRFLTVRKLRGGGFPSGQHAYRLSNSGL
                     HLFPRLADVRIEASYGLGDVRVSSGIPALDDLLDLGYWPGASTLIVGPSGSGKTLMGL
                     HFIFHGVHQGEPAVIASLQENTTQLQRIAAGFGWSLDEPHVEIMYRSPVDIYIDEWAQ
                     ELMQAVERTGARRVLVDSLGDLRMAAADETRFREFVYSLVQRFSRLGVSIMMTFEVQD
                     LFEAPRLSDSAVSHLSDNIVLLSYVKEQDSINRVMSVVKSRASRHEPGIRQFVIGRNG
                     IVLADGLPSGGVPDIDPQSPASRPATHRDP"
     gene            complement(3516..3893)
                     /locus_tag="VGQ24_00780"
     CDS             complement(3516..3893)
                     /locus_tag="VGQ24_00780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453389.1"
                     /translation="MTDPDTSRHIEIKDGDQTVAAAEVTTSPEADGTAEASLYAASGH
                     IAPGSRASLVDAVMDLPEVAQSARLKAAVPLGDTESLWRLRERTDDTVTRAAGSTALV
                     DANIPADDEPESSQEPEGETPVP"
BASE COUNT          750 a         1410 c         1484 g          814 t
ORIGIN      
        1 cctacttacc ggaataacct ccttccccgc ggcccagtca ccccggcacc cgcaggaccc
       61 cggtcggctt cccaggaccc cagcggctaa accagcccgc aaaccggcgt gatccgcggc
      121 acctgctcgc cggcgaacgc gctggatttc tggcgggtag aggccatcac gccgggatcg
      181 ctgctgcggc tgcgagcgga gatgaagctg cccggcctgg cctggctcga gctggcggcc
      241 ggccgagacc atgacggcat gaccacctac agtcagcggg ctatcttcca gccgcgtggg
      301 ctcgccggac acgcatactg gagatccata tcgccgttcc acggcgtgat attcggcggg
      361 atgcagcgca acatcaccgc atccgccgag cgggccggcc gctcggcgga caagcccgcg
      421 ccagccgggc actgagcagc gcggcaatcc atgccatgtg tcaggcacgg cacctgacct
      481 gggtgtcagg acgtcgtggc ggctcgggac caagactgtt cagcgggatg gccggaagca
      541 ggtactcgtc aggcaccgcc cgagccgccg tccgaggcag ccggtgcaca ggtacccgcc
      601 agcgctgcac cggtaaggct ggtaccgggc tattggcggg gcggctgacg ctcggcgggc
      661 tgactgcggc gctggagtct gtggttgagg agggcaggct cggcttcgcc gggcctggca
      721 cgtgtgtccg cgggctcata ttcgaagcgg ctatcggggg agaagcggaa ctgtgcgttg
      781 gtgtcaggcc agaggaggtg gatcaagcgt tggagggatg ggggcgggtg gtgcaggatc
      841 aggcgggggt ggggaggctg cagggtgcgg gcgatgagtg cgcgagtggc ggcgacgtcg
      901 atgaacttga gcctggctag ttcgaagtgg atctcggcgg cgccgggcgg gagggctgcg
      961 agtgccttct ggagctcgtg gtggctggtc aggtcggcct cgccatcgag gcgcagcccg
     1021 gcgcggcccg tgagggggct catggtgagc aggccgggct cccggctggg ccgggagcgg
     1081 aaccgctccc gcggggcgta cctcaacctc ggcaacctct cgtcacgaga gccgtctagc
     1141 aggcggctct gccagagtat ccgaaattga agaggatgtg aatagtatga tgggtccaga
     1201 tggcctattt tgaagaagta ttggcgatct tggcggcgtg tggcgcgcat gcgctgaaga
     1261 gctccagcgg gtagagtaca gctgatgagt ggaaccggtc ggccgatcta cagcatcagc
     1321 gccgtggcgc ggatggttgg cgtccccgtc gccacgatcc gcacctggga ggaccggtat
     1381 gacgtggtag ttcccggccg gaacgcgagc ggtcacaggt tgtatcgccg cgatcaggtc
     1441 gagcagctca ggttcgtgag aacctgcatg gccgatggcg ccagtcccgc tgatgctcat
     1501 cggctgctgg ccgagcggat cgacgccggg ctgcccctcg ctactccggc tgggccgcgg
     1561 gctcggctcc tcatcctgct cgccgagggt gacccgtatg ctgccgagtt ccaggagtat
     1621 tttctgaaga ccgagggatt cgaggtcgag gtaacgctcg atgaagaggc ggcccggaag
     1681 tcattcagcg agaggtctcc ggcgcttgta gttgttgagc ttctcatctc gggcggggcc
     1741 gggctggatc tgtgccgctt cttcagggaa cagggcggtg acgtgctcat aatcgcggtg
     1801 tcggtgctgg agtccaggga tctggcggtt gaagccggtg cggatgcgtt cttgctgaaa
     1861 ccattggaac ccttgcagct tgtatctact gtcagagacc tcttggggtc gagcgcgttc
     1921 ctccgccccg tgcaggaacc tgcgccatga gcgatcggct tctgagcggg cacgagccgc
     1981 tcgatgcagt cctcggagga ggactgcctg cgaatgcgat cagcatcatc atgggactgc
     2041 ccggaaccgg caagacgatt atcgctcagc agtatgcctt ccagaacggg cgcccggacc
     2101 gtcctgcagt ctatttctca acggtctctg agccgttgga aaagatcgtg cgcttcggcc
     2161 agggcctgga tttcttcgac cgggccgcga tcggcagggc cgtttggtac gaggatcttg
     2221 gggcgacggt aagcaacgac ggacttgggg gcgttgcaag gcagatcgcg acggtgctca
     2281 aggagcgcca cccaggactt atcgtgattg acagctttaa ggccttgcac gcgttcgcgg
     2341 acagtcatag tgagtttcgg aggttcctgc acgagcttgc tggaaggctg agcgtgtttc
     2401 cggccgcctc tttgtgggtg ggcgaatatg acgaggccga ggttggctca ttgccggagt
     2461 ttgccgtggc ggacgccatc gtggatctgg cgatcgagag gatcggccac cgcgggattc
     2521 ggtttcttac ggtcaggaaa ctacggggcg gcggcttccc atccggtcag catgcgtacc
     2581 ggctcagcaa cagcggcctt catctcttcc cgcggcttgc cgacgtccgg atcgaagcgt
     2641 catacgggct gggtgatgtc cgggtttcat cgggcatccc ggctctggat gatctgctcg
     2701 accttggata ctggcccggc gcgtcaacac ttatcgtcgg cccatcgggc tcagggaaga
     2761 cgctcatggg cctccacttc atattccacg gcgtacacca gggggagccc gcggtgatcg
     2821 cctccctcca ggagaacacg acgcagctcc agcggatcgc tgcaggtttc gggtggtctc
     2881 tggacgaacc gcatgtagag atcatgtacc gttcgccagt cgatatctac atcgacgaat
     2941 gggctcagga gctcatgcag gcggtggagc ggacgggagc gcggcgggtg ctcgtcgaca
     3001 gccttggcga tcttaggatg gcggcggctg acgagacgcg gttccgcgag ttcgtctact
     3061 cgctcgttca gcgtttttca agactaggcg tgagcatcat gatgaccttc gaagtccaag
     3121 atctcttcga agctccacgt ctgtcggact ctgccgtttc tcatctgtcc gacaacatag
     3181 tgttgctcag ctatgtcaaa gagcaggact cgatcaatcg agtcatgtca gtcgtcaaat
     3241 cccgcgcaag ccgccacgag cccggcatcc gtcagttcgt aatcggtcgt aacggcatcg
     3301 tgctggctga cggcctgccg agcggcggtg tgccggacat cgatccccag agcccggcaa
     3361 gtcgcccggc cacgcaccgc gacccttaag gaaaagctcc atccgcaggt gccgatcctg
     3421 atcaccacgg cggcctgctc aaccacccgt cggcgcacgt taccccgacg cttcgcgcga
     3481 ggtcatagcg cccaccacgg cactgctgac agcgattacg gtacgggcgt ttcgccttca
     3541 ggctcctggc tggattccgg ctcgtcatcc gctggtatgt tcgcatccac cagcgcagtc
     3601 gagccggccg cacgcgtgac cgtgtcgtcg gtccgctccc gcagacgcca cagcgattct
     3661 gtgtcgccaa gcgggacagc ggccttcaag cgtgcgctct gcgccacctc gggcagatcc
     3721 atgaccgcat cgactagact cgcccggctg cctggggcga tatgccccga cgccgcgtac
     3781 agcgatgcct cagcggttcc gtcggcttcc ggcgaagttg tcacctcggc agcagcgacc
     3841 gtttgatcac catctttgat ttcgatgtgc cgggacgtat cgggatcagt cacgggatgc
     3901 ctccaggcag gattgccact gtttacggca tcaaccgcac cgggcccaac ccctcgcccg
     3961 ttgcgcagtc cggccggccc ggcacacagc aacgtcgttg ccgcaggccc agttattgcc
     4021 ctgcccagcc cgcccagcat gaaacgggcc ccgccgggcc gcgcgcgccg agccggtcag
     4081 cgaccacagc ttctgagcac cggtcatgac ctcatgacct cacgccctcc caacgatcag
     4141 ggttcctcac gggccagctc gccacgttcc ggtggacctg cccgcccaac cctcccggcg
     4201 cggccacacg ctgcctcagc ccccggcaca tactcccgct ggaccaccct catcaacccg
     4261 agtctgccca ccacagccgc acaaccaggg tgcttaccga tcttgctatc agcaggaatc
     4321 cgccgggctt gccaccatcg aaagggcgat cacacctagg caccatcgag tggtcatggc
     4381 cgccgcggtg gacctcactt tcgcctcagg gccgggtggc acggcccgtg gacctggtgg
     4441 gcacccatgg tcgcgggg
//
LOCUS       DASYRV010000034         3519 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2914354, whole genome shotgun sequence.
ACCESSION   DASYRV010000034 DASYRV010000000
VERSION     DASYRV010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3519
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2914354"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1795
                     /locus_tag="VGQ24_00785"
     CDS             <1..1795
                     /locus_tag="VGQ24_00785"
                     /inference="COORDINATES: protein motif:HMM:NF013123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DPP IV N-terminal domain-containing protein"
                     /protein_id="HEV8453390.1"
                     /translation="YVEDLGTGAITQLTRDGSRTIINGTFDWVYEEELNLRDGFRWSP
                     DGARIAYWQLDASGVRDFLLINNTDSLYAFTIPVQYPKAGTTNSAARVGVVSAGGGAT
                     VWLDVPGDPRNNYIARLDWAAGSNEVVLQHLNRLQNTLEVMLGDAGTGRVRTVLTERD
                     STWVDVLDDLRWVEGGKSFTWISERDGWRHLYVVSRDGKKQRLVTPGAFDLHNPASAF
                     GDPLVVGTDSARGWVYYTASPENAAQLYLFRSRLDGRGRPERITPRNQPGYHRYLISG
                     DGRWAIHNYSSFGTPPITDLVSLPEHKVVRTLVENRRLREAVAKLRRGPAGFVKVAAR
                     AGLQLDGWVMRPANFDSTRRYPVFFEVYGEPASQTVLDRWNGAGYLWNLMLTQKGYVV
                     ASVDNRGTPAPRGRAFRKSIYQKVGIINVEDQAAAARTMRSWPWVDSTRIGVWGWSGG
                     GSMTLHLLFQHPGIYRTGMAVAPEADVRLYDTIYQERYLGLPQQSPNVYREASPVTYA
                     DRLRGNLLVVHGSGDDNVHYQATERLVNALVAANRPFTLMEYPNRSHCICEGEGTTLH
                     LFSLLTRYLEQNLPAGPREALVPANAVGQKP"
     gene            2162..2518
                     /locus_tag="VGQ24_00790"
     CDS             2162..2518
                     /locus_tag="VGQ24_00790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453391.1"
                     /translation="MTDPAFAGQLSALTAALESFEKRIVSQEVPKEAIAGLKSAVDDL
                     RLRLWGVLSTGSADDYRSFQERFRLRRAAEICEGIESELSTGLLSPRHEELRRLGEAA
                     GALTRRIKDLAEGAKR"
     gene            2527..3084
                     /locus_tag="VGQ24_00795"
     CDS             2527..3084
                     /locus_tag="VGQ24_00795"
                     /inference="COORDINATES: protein motif:HMM:NF019614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1697 domain-containing protein"
                     /protein_id="HEV8453392.1"
                     /translation="MAHVVFLRGVNVGGSRRFQPSTLARELAHLGAVNLGAAGTFVIR
                     KHLSEAALRSEFASRLPFTTDLMICRSGELEKLAATDPFPATGLPPDLRRFVSVLAKK
                     PRQLPPVPFSYPAGKDWQVRIVGVSGRLAWALWRRLGPSFVDPNGVIEKYLGVRATTR
                     NWNTVVRLCDVLRSSSPRRDKDPLR"
     gene            3130..>3519
                     /locus_tag="VGQ24_00800"
     CDS             3130..>3519
                     /locus_tag="VGQ24_00800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453393.1"
                     /translation="MVPFSARAYARLITIAAAGSLATAGCTGLAAGPESSAQTPVPVS
                     RDSVWARARRALSSEAFTLDVVDSTGGRLSGTRYASANAKQGTQPACRMTLALGIRGD
                     AEQSELSSTSRWIASEKMADKAPEVCER"
BASE COUNT          606 a         1141 c         1180 g          592 t
ORIGIN      
        1 gtacgtcgag gatctcggca ccggggccat cacccagctg acccgggacg gatcccgcac
       61 catcatcaac ggcaccttcg actgggtcta cgaggaggaa ctgaacctgc gcgacgggtt
      121 ccgttggagc ccggatggtg cccggatcgc ctactggcag ctcgacgcat ccggcgtgcg
      181 agactttctc ctcatcaaca acaccgactc gctctacgcg tttaccatac cggtgcaata
      241 cccgaaggcc ggaaccacca actcggccgc gcgagtcggg gtcgtcagtg ccgggggcgg
      301 cgccaccgtg tggctggatg tgccgggcga cccacgcaac aactacatcg cccggctgga
      361 ctgggccgcc ggctcgaacg aggtggtgct ccagcatctc aatcggctcc agaacacgct
      421 ggaagtgatg ctgggcgatg ccgggaccgg acgagtccgg acggtcctga cggagcggga
      481 cagcacctgg gtcgacgtgc tggacgatct gcgctgggtg gagggcggca agagctttac
      541 ctggatcagc gagcgcgacg gatggcggca cctgtacgtc gtctcccggg atgggaagaa
      601 gcagcgcctg gtcacccccg gcgctttcga tcttcacaat cctgcgagcg cgttcgggga
      661 cccgttggtg gtgggaacgg actcggcgcg gggctgggtc tactacacgg cgtcacccga
      721 gaacgctgcc cagctctatc tcttccgcag ccggctggac ggtcgcggcc gcccggagcg
      781 gatcacgccg cgaaaccagc cgggctatca tcgctacctg atctccggcg acggccgttg
      841 ggccatccac aactactcat cgttcggcac gccaccgatc accgacctgg tgagtcttcc
      901 cgagcacaag gtggtgcgga ccctggtgga gaaccggcgg ttgcgggagg ccgtggccaa
      961 gctccggcgg ggcccggcgg ggttcgtcaa ggtggccgcg cgagcaggcc tccagctcga
     1021 cggctgggtc atgaggccgg ccaatttcga ctcgacccgg cgttatccgg ttttcttcga
     1081 ggtctacggc gagccggcgt cacagacagt gctcgaccgc tggaacgggg cggggtatct
     1141 ctggaatctg atgctcaccc agaaggggta cgtcgtggcc tcggtggaca accgggggac
     1201 ccccgctccc cgggggcgcg ccttcaggaa atctatttac cagaaggtcg gaatcatcaa
     1261 cgtggaggac caggccgccg ccgctcgaac gatgcggagc tggccctggg ttgattcaac
     1321 caggatcggc gtgtgggggt ggagtggcgg cgggtcgatg acgctgcatt tgctgttcca
     1381 gcacccgggg atttaccgga cgggaatggc ggtggcgccc gaggccgacg tgcgactcta
     1441 cgacacgatc tatcaggagc ggtatctggg cttgccgcag cagagcccga atgtgtaccg
     1501 ggaggcgtcg cccgtcacct acgccgacag gctccggggc aatctgctcg tggtgcacgg
     1561 ctcgggcgac gacaacgtgc actaccaggc aaccgagcgg ctggtgaacg cgctggtggc
     1621 ggccaacaga ccgttcacac tgatggagta tcccaaccgt tcgcactgca tctgcgaggg
     1681 cgaggggacc acgctgcacc tcttctcgct gctgacccgc tacctggagc agaacttgcc
     1741 ggccggcccg cgcgaggcgc tagtccccgc caacgccgta ggtcagaagc cctagggcta
     1801 gccggctgcc gagcgtgaag ctgaagacgc tcgcggcctt gccagacctg gacctgctgt
     1861 cgtttggcca gcttgctcgg tacgaccggt tcgatccggt gccatcctgc actgcatgcg
     1921 gcctgaggaa gcaacgttgc caagagaaag gttgagcgga gacatcgtag ccgctgggct
     1981 gtactaccac tcatcagggc tcctggcgcg aagggcggtg caatctgccg ccagggcgtc
     2041 ccctggccgt gaccggtggt tcgggtctaa ctcaaacagc cggcacattg tatggtagat
     2101 agcggaatcc ggattgtgat caccctccgg ctcccccccg cactcgcgct gtggaggacc
     2161 gatgaccgat cctgcctttg ccggccagct tagcgccctc accgcggcac tggagtcttt
     2221 cgagaagcgc atcgtcagcc aggaagtgcc gaaggaggcg atcgccggtc tcaagagtgc
     2281 cgtcgatgac ctgcgcctgc ggctctgggg tgtgctcagc acgggaagcg ccgatgatta
     2341 tcggtcattc caggagcgct tccggcttcg ccgggccgcg gagatttgcg agggcatcga
     2401 gagcgagctc tccaccggtc tgctcagtcc ccggcacgag gagcttcgtc ggctgggcga
     2461 ggcggcggga gccctgaccc ggcgaatcaa ggatctggcc gaaggcgcga agcgctagac
     2521 ggccgcatgg cccacgtcgt attcctgcgc ggggtaaacg tcggtggctc ccggcgtttt
     2581 cagcccagca cgctcgcccg cgagctcgcc catctcggcg cggtgaacct cggcgccgca
     2641 gggacctttg tcatccgcaa gcacctcagc gaagcagcgc tgcgatccga attcgccagc
     2701 cgtctgccct tcaccaccga cctgatgatt tgccggagcg gggagctgga gaagctcgca
     2761 gccaccgatc cgtttcccgc tacgggactt cctccagacc tgcgccgctt cgtcagcgtc
     2821 ctggccaaga agccgcgtca gttgccgccg gttcccttca gttacccagc ggggaaagac
     2881 tggcaggtcc ggatcgtggg agtgtccgga agactcgcct gggccttgtg gcggcgactg
     2941 ggcccctcct tcgtcgaccc aaatggcgtc atcgagaagt accttggggt ccgggccacg
     3001 acccgcaact ggaacaccgt ggtccggctg tgcgatgtgc tgcggagttc gtcaccaaga
     3061 cgtgacaaag acccgttaag gtgagggccg aaaaatccgg attggccacc ctcatctgtg
     3121 gagtcgttca tggtcccgtt ttccgctcgt gcgtacgccc ggctgatcac gatcgcagcg
     3181 gccggttccc ttgccaccgc cggctgcacc ggcctcgccg ccgggcccga gtcgagcgcg
     3241 cagactcccg tgcccgtatc gcgggactcg gtatgggcgc gggcgcgccg ggccttatct
     3301 tcggaggcat ttacgctgga tgtcgtggat tcgaccggag gccgattaag cggaacccgg
     3361 tacgccagcg ccaacgcgaa acagggcact caaccagcct gccgcatgac cctggcgctc
     3421 ggaatccgtg gcgatgccga gcagtctgaa ctcagcagca cgagccgatg gatcgcgtcg
     3481 gagaagatgg cggacaaggc acccgaagtc tgcgagcgg
//
LOCUS       DASYRV010000035         3168 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3543991, whole genome shotgun sequence.
ACCESSION   DASYRV010000035 DASYRV010000000
VERSION     DASYRV010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3168
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3543991"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..433)
                     /locus_tag="VGQ24_00805"
     CDS             complement(<1..433)
                     /locus_tag="VGQ24_00805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453394.1"
                     /translation="MRSFLCGLFVLWAAACSDPNALPDATLTNVERTETLYSLIGTPV
                     ATPSGYALEGGLVRTDQSDAFDFAYNVEPDGRHVFLPRAALGIDTSNTLNPGFLARTE
                     SFEAIKSAPSNGYVSDRAIPIAVGERYIVRSRVTCTIGVPKY"
     gene            548..901
                     /locus_tag="VGQ24_00810"
     CDS             548..901
                     /locus_tag="VGQ24_00810"
                     /inference="COORDINATES: protein motif:HMM:NF015232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HEV8453395.1"
                     /translation="MAGLGEVVRGLAERNGVEAVLVLSADGLPIEHSSRVPFEPEAVA
                     ALTATMVQYATRLGLGAGRGAPRTSVIDYERGLLIVAQIGSGDSLAILAAPDADIGEL
                     LYDLRQHRPALAALL"
     gene            1079..2110
                     /locus_tag="VGQ24_00815"
     CDS             1079..2110
                     /locus_tag="VGQ24_00815"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HEV8453396.1"
                     /translation="MRWAVVLAGGSGTRFWPLSTPQNPKQLLPLTGSTSTAEESIDRL
                     AGLISKERILVVTGAALADQLRQRLNLAAANVLIEPRAASTAPALIWATAEAQRRDPD
                     AEVLSLHADWAIGDAAAFRRTADLALTTARRYERLVTVGVVPSRPETGYGYIVPGPPL
                     GDGARMVARFSEKPDAATALDLMAAGALWNSGLFAWTAERLLLEAEAHTPEVAPQLPA
                     LRSGDIERFFREVTPISIDVGLLERSASVAVVSGAFAWDDVGTWQALTRVRPKDPSGN
                     VVVGSAFTHEAEDCIVWSDRDTVVLSGVRDLVVVQANGRILVMPAERAASMKQLLDAL
                     PPDIRDVGS"
     gene            2107..>3168
                     /locus_tag="VGQ24_00820"
     CDS             2107..>3168
                     /locus_tag="VGQ24_00820"
                     /inference="COORDINATES: protein motif:HMM:TIGR03991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative sugar nucleotidyl transferase"
                     /protein_id="HEV8453397.1"
                     /translation="MTTLYLLEPESPGAAWAPFAGVRPLAELRAGIWRVRERWEAALG
                     NDATGLLGSHAAGFSEGDEPPILPVSPIDGPAIIGVAWFAPTGAPIDPGDARRLVYGD
                     ETVGWVIPAGERWDGPHTKGPELPIEGVLLRGTFDLLTALEVLLPADCADFLAAPNDG
                     VPVGSVVLGEPSHLVAMGANVEPGVVFDLRNGAIVLDQGAEVRSGTRLEGPIYVGPGT
                     KILGGFLRASVFGSECRVRGEVAVSVFLGFANKSHDGFVGHSIIGPWVNLGAGTTTSN
                     LKNTYGLVRLEIDGERIETGRLNVGSLIGDHAKTAIGTMLATGTVVSAGANVFGTPTP
                     PKYVPPFAWGCSGSERMTED"
BASE COUNT          511 a         1020 c         1095 g          542 t
ORIGIN      
        1 cgtacttggg aactccgatg gtgcacgtga cccgactccg cacgatgtag cgctcgccca
       61 cggcgatcgg gatggcccga tcgctcacat acccgttgct gggcgcggac ttgatggcct
      121 cgaagctttc ggtacgggcc agaaagccgg gattgagggt gttgctggta tcgatgccca
      181 gggcggcacg ggggaggaac acgtggcgcc catccggctc gacgttgtac gcgaaatcga
      241 acgcgtccga ctggtcggtg cggaccaggc cgccctccag cgcataccca ctcggggtgg
      301 cgaccggcgt accgatcagc gagtagaggg tttcggtgcg ctcgacgttg gtaagggtgg
      361 cgtcgggcag cgcgttggga tcgctgcagg cggccgccca cagcacgaaa agcccacaca
      421 ggaatgatct catagagccg gaaggttaag cgtcacgaag ggcggaatca atatttttct
      481 tgacttcgct cagagcgact catacgttcc cgaggcattt tccccagaca cgaacggagt
      541 gagagcgatg gccggcttgg gagaggtcgt gcgagggttg gccgagcgca acggcgtcga
      601 ggcggtgctg gtgctcagcg cggatggcct gccgatcgag cacagctcac gggtcccgtt
      661 tgagcctgaa gccgtggccg cactcacggc gacaatggtg cagtacgcca ctcgcctcgg
      721 ccttggcgcc ggacgcggcg cgccgcgcac atcggtgatc gactacgagc gaggccttct
      781 catcgtggcg cagatcggat ccggcgattc gctggcgatc ctggcggcac ccgatgccga
      841 catcggcgag ctgctgtacg atctccggca gcatcggccg gcactcgcgg cgttgctgta
      901 aagcggggca gcggggcagc ggggcagcgg ggcagcgggg cagcacaaag ctacaagact
      961 tcctctccca tctatagatt tccatccgat tcctgccacg aagccgaatt ttctggagct
     1021 tcactattct catgtttaag tctgcccagc ttccccgctg ccccgctgcc ccgcctctat
     1081 gagatgggct gtcgtgctgg cgggtggatc gggcactcgg ttctggcccc tgagcactcc
     1141 gcagaatccc aagcaactgc tcccgctcac cggctcgacc tcgaccgcag aggaatcgat
     1201 cgatcggctg gccggactaa tttcgaagga acgcattctc gtggtcactg gcgccgccct
     1261 ggcagaccag ctccggcagc gcctcaatct tgccgccgcc aacgtcctga tcgagccacg
     1321 cgcggcctcg accgccccgg cgctcatctg ggccaccgcg gaagcgcagc gccgcgatcc
     1381 ggacgccgaa gtcttgtcgc tgcatgcgga ttgggccatc ggagacgcgg ccgcgttccg
     1441 ccgtaccgcg gacttggcgc tcaccacggc ccgccgctac gagcggctgg tcaccgtggg
     1501 ggtggttccg tctcgtcccg agaccgggta cggctacatc gtgcctggtc caccgctcgg
     1561 ggatggcgcc cgcatggttg ctcgcttctc ggagaaaccg gatgccgcca ccgctctcga
     1621 tctgatggct gcgggagcgc tgtggaacag cggacttttc gcatggacgg ccgaacgcct
     1681 gctgctggag gcggaggcgc acactcccga ggtagctccc caattgccgg cgctcagatc
     1741 gggtgatatc gagcggttct tccgggaggt gacgccgatc tccatcgatg tgggtctgct
     1801 cgagcgcagc gcctcggtcg ctgtcgtcag cggcgccttt gcctgggacg acgtcggcac
     1861 ctggcaggca ctcacccgcg tccgccccaa ggaccccagc gggaatgtcg tggtcggcag
     1921 cgccttcacc cacgaggccg aggattgcat cgtctggtcg gatcgtgaca cggtggtgtt
     1981 gagcggggta cgggacctcg tcgtggtgca ggcaaacggc cggatcctgg tcatgccggc
     2041 agagcgggca gcttccatga agcagctcct cgacgcgctc ccacctgaca tccgtgacgt
     2101 cggctcgtga ctacgctcta cctgctcgag ccggagtcac cgggagcagc gtgggccccg
     2161 tttgcggggg tccgtccgct ggcagagctc cgggccggca tctggcgcgt gcgcgagcgg
     2221 tgggaagcag cgctgggcaa cgacgcgacg gggctgctcg ggtcgcacgc cgcgggattc
     2281 agcgagggcg acgagccgcc catcctgccg gtgagcccga tcgacggccc ggcgatcatt
     2341 ggggtagcgt ggttcgcgcc gaccggtgcg ccgatcgacc cgggtgacgc tcgccggctc
     2401 gtctatggag acgagactgt cggctgggta atccccgcag gtgaacgctg ggatggtcct
     2461 cacaccaagg gcccggagct cccgatcgag ggcgtgctgc ttcgcggcac gttcgatctg
     2521 ctcaccgccc tggaagtgct tctccctgct gactgcgccg acttcctcgc ggcgcccaac
     2581 gacggggtcc cggtcgggag cgtggtcctc ggcgagccga gtcacctggt ggcaatgggt
     2641 gcaaacgtcg agcccggcgt ggtatttgac ctcaggaacg gcgcgatcgt gctcgatcag
     2701 ggagccgagg tccggagcgg cacccggctg gagggcccga tctacgtcgg gcccggcacc
     2761 aagatcctcg gcgggttcct tcgggcctcg gtgttcggct ccgagtgccg ggtccggggc
     2821 gaagttgcgg tcagcgtgtt cctgggattc gccaacaaga gccacgacgg gttcgtggga
     2881 cacagcatca tcggcccatg ggtcaacctc ggcgcgggca cgaccacctc gaacctcaag
     2941 aatacgtacg ggctggttcg cctcgagatc gatggcgagc ggattgagac gggacgactc
     3001 aacgtaggga gcctgattgg cgaccatgcc aagacggcga tcggaacgat gctggccaca
     3061 gggacggtgg tctcggccgg cgccaacgtg ttcggtacgc ccacgccgcc gaagtatgtg
     3121 ccacccttcg catggggctg ctcggggagc gagcggatga ccgaggat
//
LOCUS       DASYRV010000036         2406 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1675876, whole genome shotgun sequence.
ACCESSION   DASYRV010000036 DASYRV010000000
VERSION     DASYRV010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2406
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1675876"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1103
                     /locus_tag="VGQ24_00825"
     CDS             <1..1103
                     /locus_tag="VGQ24_00825"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEV8453398.1"
                     /translation="DDRADNAGDTVGFAFASHRDSRAQRANLDARLNAALSPQLTITA
                     GAQAERETERQAGVTTSNFGGISTTPDTPFDRGRTTLGYYAQGLLDLPSGLALNVNAR
                     LDDNSGFGTFFTYRAGAAYRLRSQTRLRASVGRAFKAPTFCEQFCDAPFVVGDSSLSP
                     EHSTSWEVGLEQGVAAGGLSVWATYFDQRFRDMVVYDGSAAPGEPTYRNGAGARARGV
                     ETGVTAVFGPGVRASASYTYLDTEATDDAGQPSASFAAGERLIRRPKHSAELALRARV
                     FDRALLGGSVTYLGRRDDVDFNQFPSQRIELPAYAIIDLAGEIEVLRAGPGHPGVSGV
                     LRVENLFNQHYEQVVGFAGRSRGVFGGARFRF"
     gene            1147..2220
                     /locus_tag="VGQ24_00830"
     CDS             1147..2220
                     /locus_tag="VGQ24_00830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453399.1"
                     /translation="MLTTRITAGLALAIVGSTACAETSAPLPPPEEVVVVLNSNSATL
                     SLIPVAAPTQVSTVPLGASDVQPASVTSRGAMAVVPLQGRDAIAVVDLRARQLVNTIS
                     LAPGSGLAGAALISDSIAYVSNSSLHTVTRVDLSTGDTVSLPVGRTPQQITFTRGRVL
                     VINANLDDLGRPAGESWISVIDPAGNLTGLVIDSIPLFGPGNARFSTVAGDGLVYVVQ
                     DGDPTIDEGRLSVVDPVERTERASFGGFGFGPGDLASDGGDRLLISSRTEGLMEFDTA
                     ERTVVRGEGNGVGIPGNTGVAVDSRGRIYALEAGCSDNGVVHVLRPDFTEIRSVPVGQ
                     CASQVLLARVPPAGVEATDEPQL"
BASE COUNT          381 a          789 c          816 g          420 t
ORIGIN      
        1 tcgacgaccg ggccgacaat gccggcgaca cggtcggatt tgctttcgca tcccatcgcg
       61 actcgcgagc ccagcgcgca aacctggacg cgcggctcaa cgcagctctc agcccccagc
      121 tcaccatcac tgccggcgcg caggccgagc gggagacgga gcggcaggcg ggagtgacga
      181 cctcgaactt cggtgggatc agcacgaccc cggatacccc gttcgatcgg ggccgcacga
      241 ccctgggcta ttacgcccag ggactgctgg atctcccctc cggcctcgcg ctcaatgtca
      301 acgcacggct ggatgacaac agtggcttcg ggaccttctt cacctatcgc gcgggagccg
      361 cgtaccgctt gcggtcacag acccggctgc gggcctcggt ggggcgtgcc ttcaaggcgc
      421 cgaccttctg cgagcagttc tgcgatgcgc cgttcgtggt cggtgattcc agcctgagcc
      481 cggagcactc gaccagttgg gaggtaggcc tcgagcaggg agtggccgct ggcgggctct
      541 cggtctgggc cacctacttc gaccagcggt tccgagacat ggtcgtctac gacggaagcg
      601 cggcaccggg ggagccaacc taccgcaacg gggccggggc gcgggcccgc ggtgtggaaa
      661 caggggtgac cgcggtgttc ggtcccggtg tccgagcctc ggcctcgtac acctacctcg
      721 ataccgaggc gaccgacgat gccgggcagc catccgcctc ctttgcggcc ggcgagcgcc
      781 tgatccgcag accgaagcat tctgctgagc tggcgctccg ggcccgggtc ttcgaccgcg
      841 ccctccttgg tggctcggtg acttacctgg gtcggcggga cgacgtggac ttcaaccagt
      901 tccccagcca acggatcgag ctgccggcct atgcgatcat tgatctggcc ggcgagatcg
      961 aggtactccg cgccggaccg ggtcatccgg gcgtctccgg agtgctgcgg gtcgagaatc
     1021 tgttcaacca gcactatgag caggtggtcg ggtttgccgg gcggagccgt ggcgtcttcg
     1081 ggggggccag gttccgtttc tgagtggtga ctggcggcgg agaggaggcg cttcgatctt
     1141 tgaggcatgc tgacaacccg gatcacggcc ggcctggcct tggccatcgt cggttcgacg
     1201 gcctgcgccg aaacctccgc cccccttcca cctccggaag aggtggtagt ggtcctcaac
     1261 agcaactcgg ccacgctgag cttgattcct gtcgccgccc cgacccaggt ctccacagtt
     1321 ccgctcggcg cctcggacgt gcagcccgcg agcgtgacca gccgcggagc catggcggta
     1381 gttcccctcc agggccggga tgctatcgca gtggtcgacc tcagagccag gcagctggtg
     1441 aacacgatct cgctcgcgcc cggctccggc ctggctggtg ccgccttgat cagcgactcg
     1501 atcgcctacg tctccaactc cagtctgcat acggtcactc gggtcgatct ctccacggga
     1561 gacaccgtca gcctgccggt aggccgcacg ccccagcaga tcaccttcac ccgcggccgg
     1621 gtgctggtga tcaacgccaa tctcgatgat ttggggagac cggctggcga gagctggatc
     1681 agtgtgatcg atcctgccgg taacctgacc ggactggtga tcgactcgat tcctctgttc
     1741 ggacccggca acgcccggtt cagcacggtt gcgggtgatg ggctggtcta cgtggttcag
     1801 gatggagatc ccacgatcga tgaggggcgg ctttcggtgg tggacccggt cgagcgaacc
     1861 gagcgggcca gcttcggagg atttggcttc ggaccagggg acctcgccag cgacgggggc
     1921 gaccggttgc tgatcagctc ccggaccgag ggcctgatgg agtttgatac ggcagagcgc
     1981 acggttgtca ggggggaagg gaacggtgtc gggatccccg gtaatacggg agtcgccgtg
     2041 gattcacggg ggcgcatcta cgcgctggag gcgggatgct cggataatgg ggtcgtccac
     2101 gtcctgcgac ccgactttac cgaaatacgt tccgtccccg tgggacagtg tgccagccag
     2161 gtgctacttg cccgggttcc acccgcaggc gtggaagcga ccgacgagcc tcagctctag
     2221 cgaagtatcc catgccgctc gtctctacat cgtcgctcgt cctttccacc ctgcgctata
     2281 gcgagacgtc gaagatcgtg cgcctggcca cccgggagca cggggtccag agcgcgatcg
     2341 ccaagggagc gttgcgcccg aagagccggt tcggggctgc cctccagcta ctcagcgaag
     2401 gccagg
//
LOCUS       DASYRV010000037         4482 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_430533, whole genome shotgun sequence.
ACCESSION   DASYRV010000037 DASYRV010000000
VERSION     DASYRV010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4482
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_430533"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(14..2482)
                     /gene="leuS"
                     /locus_tag="VGQ24_00835"
     CDS             complement(14..2482)
                     /gene="leuS"
                     /locus_tag="VGQ24_00835"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEV8453400.1"
                     /translation="MTEHHPDDSYQPEVVEAKWQARWAERHTNEPDLEGATRPFYNLM
                     MFPYPSAEGLHVGNFFAFTGADVYGRFKRLQGYQVFEPMGFDAFGIHSENYALRIGTH
                     PAELIPRNIENFRRQLKRLGGMFDWRHQLSTTDPDYYRWTQWLFLQLYHAGKAYKKKA
                     AVNWCPRDKTVLANEQVINGACERCGSPVEQRFLEQWFFRITDYAERLLANLADPTKM
                     DWSASTVSAQRNWIGRSEGAEIDFPSEAGPIRVFTTRPDTLFGGTFLVLAPEHPLVDR
                     LTAGSERAIVEAYRKAAAAKDIVSRKVGEKEKTGVFTGAFAVNPATGAKIPVWISDYV
                     LMEYGTGAIGGVPAHDERDFLFALTYRLPIVRVLAAEGETGSTPVYEPSTGTSGLRLV
                     NSGQFSELPAEQGIQAIIAWLEAEQLGKRRVQYRLHDWCISRQRYWGPPIPIIYCDAC
                     GPVPVPEKDLPVLLPLIPDFQPDDSGISPLARHEEWYRVPCPRCGGKAHRETDVSDTF
                     LDSAWYYLRYLATEFADRPFDPARNQRWLPVASYIGGNEHAVLHLLYSRFIAMGLHDQ
                     GQLDFEEPFRKFRAHGTIVKDGAKMSKSRGNVVIPDQYVSKWGADTFRTYLMFLGPYE
                     EGGDFRDEGLSGPRRFLDKVWELVQRCERRTLTGEELQHGIVVKWHQTKKRVTVGLEQ
                     LSYNTAIAALMELLNALRAVNCSERKIVKEFVIMLAPFAPHFAEECWERLGATTSVFE
                     AGWPDWDEGLTLEQEIEVPVQVNGKTRSRVRVPRGATEEHVVAAALRDPAVTKFTDGA
                     PSKIIYVKDRLLNLVVRNAVRGKG"
     gene            2509..3771
                     /locus_tag="VGQ24_00840"
     CDS             2509..3771
                     /locus_tag="VGQ24_00840"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098561 - methyl accepting chemotaxis
                     protein complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEV8453401.1"
                     /translation="MAFFRNPLSRAVQIGGVVTTFALTAVVWIYLSGDLGWPLPYMLG
                     TFVLLCLLILWAALSWLERRIIRPLGVVSAITLRIAEGELTVPQEEIERIGGGAVTDA
                     VQRMVRELNRLVGSIRHAATDSAALAEEISSATQQMVSSTEEVAGTTGDLTSRAIAQA
                     QLVRGVADDAGRILAIAEEVATGALQAVERNAALASLARGHRERLGASVEALDRLAEE
                     VALGTAEAEALAEASEALERFIDQARTVAKQTRILALNASIEAARAGSEGHGFATVAD
                     EVRKLSGQAALAAAATSDTVRTIAGRVASAQERLLRLGEGGLQARDAARSAVEGLSAV
                     SAEADAVDAWTRNVSQASNEVRALIDGIAGRTRELATGTEEFAAAAEQIAASTEELNA
                     STEEITASTQHLANSAVKLTEAVGIFRT"
     gene            complement(3800..>4482)
                     /locus_tag="VGQ24_00845"
     CDS             complement(3800..>4482)
                     /locus_tag="VGQ24_00845"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEV8453402.1"
                     /translation="VRNGWLARRSADRVTPFVLLEALQRHFGAETVYTADSGNGTFLA
                     MECLRLERPGRFLAPVDYSCMGYAVPAAIGAKLGNAQAPVVALAGDGAFLMTGLELLT
                     AVHYGIPLAVFVLRDRELAQIAQFQATAFNRRTASVLPDFHLGSLAEAVGVEWLELGN
                     DEEIETVLRAVRATVALGRPVLVDVAIDYSEQTFFTRGVVRTMLGRLPWPDRLRFVGR
                     AVARRLGG"
BASE COUNT          744 a         1524 c         1459 g          755 t
ORIGIN      
        1 tccccttcgc ctctcacccc ttacctctca ccgcgtttcg gacgaccaga ttcagcagcc
       61 gatccttcac gtagatgatc ttgctggggg cgccgtcggt gaacttcgtg acggcggggt
      121 cacgcaacgc ggccgccacg acgtgctcct ccgtagcccc gcgcgggacg cgcacccgcg
      181 agcgcgtctt gccattcacc tggaccggca cctcgatctc ctgctccagc gtgagcccct
      241 cgtcccagtc gggccagccg gcctcgaaca ccgaggtggt cgcccccagg cgctcccagc
      301 attcctccgc gaaatggggg gcgaacggcg cgagcatgat cacgaactcc ttcacgatct
      361 tccgctcgct gcaattcacc gcccggagcg cgttgagcag ctccatcagc gccgcgatcg
      421 ccgtgttgta ggagagctgc tccagcccca cggtcacgcg cttcttggtc tggtgccact
      481 tgacgacgat gccgtgctgc agctcttcac ccgtcagggt ccgccgctcg cagcgctgca
      541 ccagctccca cactttgtcg agaaacctcc gtggcccgct gagtccctca tcccggaagt
      601 cgcccccctc ttcgtacggt cccaggaaca tgagataggt gcgaaaggtg tcggcgcccc
      661 acttgctgac gtactggtcc ggaatgacca cgttaccccg cgacttcgac atcttggcac
      721 cgtccttcac gatggtgccg tgcgccctga acttccggaa cggttcctcg aagtcgagct
      781 ggccctggtc gtggagcccc atcgcgatga agcggctgta aagcagatgg agcacggcgt
      841 gctcgttgcc gccgatgtag ctcgccactg gaagccagcg ctgattcctt gccgggtcga
      901 aaggccggtc agcgaactcg gtggcgaggt agcggaggta gtaccaggcc gaatcgagga
      961 aggtgtcgga gacgtcggtt tcccggtggg ccttcccccc gcagcggggg caggggaccc
     1021 ggtaccactc ctcgtgccgc gccagcggcg agatccccga atcgtcgggc tgaaagtcgg
     1081 ggatgagcgg gagcagtacc gggagatcct tttccggcac gggcactggc ccgcaggcgt
     1141 cacagtagat gatcggaatc ggcggtcccc agtaccgctg gcgcgagata caccagtcgt
     1201 gtaaccggta ctggacgcgc cgtttgccga gttgctccgc ttcgagccag gcgatgatgg
     1261 cctggatgcc ttgctcggcg ggcagctccg agaattgccc ggagttgact agccgcaggc
     1321 cggaggtgcc ggtgctcggc tcgtagaccg gagtggatcc agtctcgccc tcggccgcga
     1381 gcacccggac gatcggaagc cgataggtca gtgcgaagag gaaatcccgc tcgtcgtgcg
     1441 ccggcacgcc cccgatcgcg ccggtgccgt attccatcag cacgtaatcg gagatccaga
     1501 ccgggatctt ggcgcctgtc gcgggattca ccgcgaaggc acccgtaaag acgccggtct
     1561 tctccttctc gccgaccttg cgggagacga tgtctttggc cgccgcggcc ttgcgatagg
     1621 cctccacgat tgcgcgttcg ctcccagcgg tgagccggtc gaccagcgga tgttccgggg
     1681 cgagcaccag gaaggtgccc ccgaagagcg tgtcgggacg ggtggtgaac acccggatcg
     1741 gaccggcctc gctcggaaaa tcgatctccg cgccctcgct gcgtccgatc caattgcgtt
     1801 gcgcggagac ggtcgacgcc gaccagtcca ttttggtagg atcggcgaga ttggccagca
     1861 gccgttcggc atagtcggta atgcggaaga accactgctc cagaaagcgt tgctccaccg
     1921 gagagccgca gcgctcacag gccccgttga tcacctgctc gttggccagc accgtcttgt
     1981 cgcgcggaca ccagttgacg gcggccttct tcttgtatgc cttgcccgcg tgatagagct
     2041 gcaggaagag ccactgggtc cagcggtaat agtccgggtc cgttgtggac agctggtggc
     2101 gccagtcgaa catcccgccc agccgtttga gctggcgccg gaagttctcg atgttgcgcg
     2161 gaatcagctc ggcgggatgg gtcccgattc ggagcgcgta gttctcactg tggatgccga
     2221 aggcgtcgaa tcccatgggc tcgaacacct ggtagccttg cagccgcttg aaccgcccat
     2281 agacgtcggc gcccgtgaag gcgaagaagt tcccgacgtg gagcccctcg gcggatggat
     2341 agggaaacat catgaggttg tagaacgggc gcgtcgcgcc ctccagatcc ggctcgttgg
     2401 tatggcgctc cgcccagcgc gcctgccact tcgcctcgac aacctcgggt tggtacgaat
     2461 cgtcgggatg gtgttccgtc atgccggtaa cttaatatcc attcccccat ggccttcttc
     2521 cggaatcccc tcagccgagc cgtccagatc ggcggggtgg tgaccacctt cgcccttacc
     2581 gcggtcgtgt ggatctacct ctcgggcgat ctcggctggc cgctgccgta tatgctgggg
     2641 accttcgtcc tgctctgtct gctgattctc tgggccgcgc tctcctggct cgagcgccgc
     2701 atcatccggc ccctcggcgt ggtgagcgcg atcacgctgc ggatcgccga gggcgagctc
     2761 acggttcccc aggaggaaat cgagcgcatc ggcggtgggg ccgtcaccga cgcggtgcag
     2821 cgcatggtgc gcgagctcaa tcgtctggtg ggctcgattc ggcatgccgc gaccgattcc
     2881 gccgcgctcg ccgaagagat ctcctctgcc acccagcaga tggtatccag cacggaggaa
     2941 gttgccggca cgacgggaga tctcaccagc cgcgccatcg cccaggccca attggtacgt
     3001 ggcgtcgcgg acgacgcggg gcgcattctc gcgatcgccg aggaggtcgc gaccggagcg
     3061 ctgcaggccg tggagcggaa cgccgcgctg gcctctctcg cgcgtgggca ccgggagcgg
     3121 ctcggggcga gcgtggaagc gctggaccgg ctcgcggagg aggtcgcgct cggaaccgcc
     3181 gaggcagagg cactggcgga agcctccgag gcgctggaac gcttcatcga tcaggcccgc
     3241 acggtcgcga agcagactag gatcctggcg ctcaacgcct cgatcgaagc ggcgcgagcc
     3301 ggcagtgagg gccacggctt cgccaccgtc gccgatgagg tgcgcaagtt gtcgggtcag
     3361 gcggcgctgg ccgccgccgc gaccagcgac accgtgcgaa ccatcgcagg gcgggtcgcc
     3421 tcggcacagg aacggctgct tcggctcggg gaagggggct tgcaggcccg cgatgccgcg
     3481 cggagcgccg tcgaaggatt gagcgcggtc tccgccgaag ccgatgcggt ggatgcctgg
     3541 acccgcaatg tgtcccaggc gagcaacgag gtgcgggcct tgatcgacgg aatcgcgggt
     3601 cgcacccgag agctggccac cggaacggag gaatttgccg ccgccgccga gcagatcgcc
     3661 gcctcgaccg aggagctgaa cgcttcgacc gaggagatca ccgcatcgac ccagcatctg
     3721 gccaactcgg cggtaaagct cactgaagcc gtggggatct tccggaccta gcctcctagc
     3781 ctcctaacct cctagcctcc tagcctccta gcctcctagc taccgccctc cccacgaagc
     3841 gcagccggtc cggccagggc aaacggccca gcatggtccg cacgacgccc cgggtaaaga
     3901 aggtctgctc cgaatagtcg atcgccacat ccacgagcac cggccgcccc agcgccacgg
     3961 tcgcccgcac ggccctcagc accgtctcga tctcctcgtc gttccctagc tccagccact
     4021 cgaccccgac ggcttcggcg aggctgccca ggtggaaatc cggcagcacg ctcgcggtac
     4081 gccggttgaa ggcggtggcc tgaaattgtg cgatctgcgc cagctcacgg tcgcgcagca
     4141 cgaagacggc aagcgggatt ccgtaatgca ccgcggtgag cagctcgagt ccggtcatca
     4201 gaaaggcacc atcccccgcc agcgctacga cgggagcctg cgcgttcccg agcttcgcgc
     4261 cgatcgccgc cggcacggcg tagcccatgc atgagtagtc gactggtgcg aggaatcgcc
     4321 cgggccgctc gagtcgcaga cactccatcg cgagaaacgt cccgttcccg ctatcggccg
     4381 tgtagaccgt ctctgcgccg aaatgccgtt gcagcgcctc gagcagcacg aacggagtga
     4441 cccgatcggc gctgcggcgc gccagccagc cgttccggac tt
//
LOCUS       DASYRV010000038         3656 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3960561, whole genome shotgun sequence.
ACCESSION   DASYRV010000038 DASYRV010000000
VERSION     DASYRV010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3656
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3960561"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            259..1398
                     /locus_tag="VGQ24_00850"
     CDS             259..1398
                     /locus_tag="VGQ24_00850"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEV8453403.1"
                     /translation="MLPEGFCATVVASQLGPVRHLAVAPNGDLYAALSGKSGDATGGV
                     LAFRDRDGDGKPDERASFGPGGGNDVEVHDGYIYFAPNDRIVRYRLSGKLEPTGKEET
                     IVADLPTKGSHTAKSLAFGSGDTMFVVIGSATNSCQKIDRLPASPGKDPCKELESRAG
                     VWQFSASRLGQRFADGRRFATGLRNAIAITTNPGTGVLYAGVHGRDQLSDNWGFSSEV
                     NANNPGEELVRIQAGDDFGWPYCYYSNQYKKKVLAPDYGGDGEKVGRCAAAKNPLMSF
                     PGHWAPMAITFYPGDQFGPTYKGGLFIAFHGSWNRAPLPQEGYRVVFVPFANGKPTGE
                     YSTFATDKGSPTSLRASGVAVAPDGSLYISADQNGKIWRVTKTKT"
     gene            complement(1461..2756)
                     /gene="thrC"
                     /locus_tag="VGQ24_00855"
     CDS             complement(1461..2756)
                     /gene="thrC"
                     /locus_tag="VGQ24_00855"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEV8453404.1"
                     /translation="MRFQTHRPASWQVCTACGNEMVETDPHPRCSVCGGLLEIHHRPP
                     TLTPTELLHRFTERRGSSPGATASGVWRFREIVLPSADEVVSYPEGNTPLLHRVALDR
                     WSGVDHLLLKHEGHNPTGSFKDRGMTVGVTQARRIGATAVACASTGNTAASLAAYAAQ
                     GGLPALVLVPRDWVPTGKLAQALAYGSKTLLVRGDFDDCLRLVEEASEQLGVYLLNSI
                     NPFRIEGQKTIILELLQQLSWTAPDWIIFPAGNLGNTAAFGKALREAREWGLIGRMPR
                     LAAVQAAGAAPFARSFMEGFVERHRVKAVTVATAIKIGNPASYDRAVVAIRETNGVVL
                     SVPDAELLEAKAAIDASGVGCEPASAVSLAGLRQLVRSGVVKPTDRVVAVLTGHILKD
                     PDLLLRYHQEMDPPPAGANRPVEIEATLTAVERVLQQKA"
     gene            complement(2753..>3656)
                     /locus_tag="VGQ24_00860"
     CDS             complement(2753..>3656)
                     /locus_tag="VGQ24_00860"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: protein motif:HMM:TIGR00191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006566 - threonine metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEV8453405.1"
                     /translation="GLDILGLALAGPGDSVRAEWTDDRGIRILESGHPDLPSDATRHT
                     AGLAAIAVVERAGDRGSRDRGIGLTVRKGLPLSGGQGGSAASAVAGAVAVNALLGNPL
                     DRLALVGACLDAEEGVSGRHADNVVPSLLGGIVLIRSLEPLDLVQLPVPDELCVVIAR
                     PDQQLRTAHSRSVLPAVIPREVALHQAAQVGAMVAALASDDYALLGRAIDDRIAEPVR
                     AELLPGFRQAKQAALAAGALGSSISGGGPTAFALVRGAKAGDKVASAMADAYAACGYK
                     SEVRVAQIDRQGARIIGDSERAQA"
BASE COUNT          635 a         1235 c         1192 g          594 t
ORIGIN      
        1 aatttccaat ttccccctct gaaaagtctc gaggcccccc gggcggtgcc cggacaaggg
       61 ggggtccggt tatatgttcg ggcatggttt cagggaatgc cgactcccct ttccgcctcc
      121 agatagggtg ctgttatgac gcgtccacac tcgattcttc gctctgcggc cttcggactg
      181 agccctctac tcctgggact ttctttaacc gccgcccctc gggccaattc caaatgcgat
      241 cccgataacg gggggctggt gctacccgag ggcttctgcg ccaccgtggt ggcgagccag
      301 ctcggacccg tacgccacct cgcagtcgct cccaatggcg acctctacgc cgcgctgagc
      361 gggaaatccg gcgatgcgac cggcggcgtg ctcgcgttca gggatcgaga tggtgacggc
      421 aaaccggacg aacgcgccag cttcggaccg ggcggtggaa acgatgtcga ggtgcacgac
      481 ggttacatct acttcgcgcc caacgatcgc atcgtgcggt accgcctctc cggcaagctc
      541 gagcctaccg ggaaggagga aacgatagtg gccgaccttc ccaccaaggg cagccacacg
      601 gccaagagcc ttgccttcgg gtcgggggac acgatgttcg tcgtcatcgg ctcggcgacg
      661 aacagctgcc agaagatcga tcgtctcccc gcgtcgcccg gaaaagaccc ctgcaaggaa
      721 ctggagtcac gcgccggtgt ctggcagttc tcggccagcc gcctgggcca gcgcttcgcc
      781 gatgggcggc gtttcgccac cgggcttcga aacgcgatcg caattacgac caacccggga
      841 accggcgtac tctatgccgg cgtgcacggc cgcgatcagc tgagcgataa ctggggcttc
      901 agcagcgaag tgaacgcgaa caatccgggc gaggagttgg tccggatcca ggccggcgac
      961 gacttcggct ggccctattg ctactacagc aatcagtaca agaagaaggt gctcgctccc
     1021 gattatggtg gcgatggcga gaaagtcggc cgctgcgcgg cagccaagaa cccgctgatg
     1081 tccttccctg gccactgggc gccgatggcc atcacgtttt atcccggcga ccagttcggt
     1141 ccgacctata aggggggcct gttcatcgca ttccacggat cgtggaatcg cgctccgctg
     1201 ccgcaggaag gttaccgcgt ggtgttcgta cccttcgcga atgggaagcc gacgggcgag
     1261 tactccacct ttgccacgga caagggaagc cccacctcgc tccgcgcgag cggggtggcg
     1321 gtggcgccgg atgggtcgct gtacatctcg gccgaccaga atgggaagat ctggcgggtc
     1381 accaagacaa aaacgtgaac agtaaacggt gaacagtgaa cgggggtcgg gtagcccgtt
     1441 tacggtttac cgttcaccgt tcacgctttt tgttgcagca cccgctcgac cgccgtgagg
     1501 gtcgcctcga tctcgaccgg ccggttcgcg ccggcgggag gggggtccat ctcctggtga
     1561 tatcgcagga gcaggtccgg atctttgaga atgtgcccgg tgagcacggc taccacccgg
     1621 tcggtcggct tcaccacgcc tgagcgaacc agctgccgga gcccggccag gctgactgca
     1681 cttgccggct cgcagcccac acccgatgca tcgattgccg ccttggcctc gagcaactcg
     1741 gcatcgggca ccgagagcac cacgccattg gtttcccgta tcgccaccac cgcccggtcg
     1801 taggacgcgg ggttaccgat cttgatcgcg gtggccaccg tcaccgcctt gacccggtgc
     1861 cgctcgacaa agccctccat gaaactgcgc gcgaagggtg ccgcgccggc cgcctgcacc
     1921 gcagcaaggc gcggcatgcg tccgatcagt ccccactctc gggcctcccg cagcgctttc
     1981 ccgaaggcgg ccgtgttgcc caggttgcca gccgggaaga tgatccaatc cggcgctgtc
     2041 caagagagct gctggagcag ctcgaggatg atggtcttct gcccctcgat gcggaatggg
     2101 ttgatcgagt tgagcagata gacgcccagt tgctcgctgg cctcctccac cagacggaga
     2161 cagtcatcga agtcgcctcg cacgaggagg gtcttcgacc cgtacgccag cgcctgagcc
     2221 agcttaccgg ttggcaccca gtctctcggc accagcacga gcgccggaag ccccccctgg
     2281 gcggcatagg cggcgagcga cgctgccgtg ttcccggtcg aggcgcaggc cactgcggtc
     2341 gccccgattc gtctggcctg ggtcacaccc accgtcatac cccggtcctt gaaggaaccg
     2401 gtcggattgt gcccctcgtg cttgagcagg aggtggtcga cgccggacca gcggtcgagg
     2461 gcgacgcggt gcagcagcgg cgtgttgcct tccggatagg agacgacctc gtccgcggac
     2521 ggcagcacga tctcccggaa acgccagaca ccggacgcag tggcacccgg agagcttccg
     2581 cgccgctcgg taaaccgatg gagcagctcg gtcggagtga gggtcggcgg ccggtggtga
     2641 atctcgagca ggccaccgca gacgctacag cgcggatgcg gatcggtctc caccatctcg
     2701 ttcccgcagg cggtacacac ctgccagctc gccgggcgat gagtctgaaa cctcatgcct
     2761 gcgctcgctc ggaatcgccg atgatacgag ccccctggcg gtcgatctga gccacccgca
     2821 cctcactctt gtagccgcac gctgcatatg cgtcggccat ggccgacgcg accttgtcac
     2881 cggccttggc tccccgtacc agcgcgaagg ccgtgggccc gcccccggag atcgagctcc
     2941 ccagcgcgcc ggcggcgagc gcggcctgtt tggcctggcg gaaccccggc agcagttcgg
     3001 cgcggacggg ctcggcaatg cggtcgtcaa tggcacggcc gagcagggcg tagtcgtcgg
     3061 aggcgagggc ggcgaccatg gcgcctactt gcgctgcctg gtgcagggcg acctctcgtg
     3121 gaatcaccgc gggcagcacg gaacgggaat gcgcggtacg gagttgctga tcaggccgcg
     3181 cgatcacgac gcagagctcg tccgggacgg gaagctggac cagatcgagc ggctcgagcg
     3241 agcggatcag cacgatcccg ccaaggagcg aaggcacgac attgtcggca tgccggcccg
     3301 acactccttc ctcggcgtcg aggcacgcgc ccaccaacgc gagccgatcg agtggattcc
     3361 ccagcagtgc gttgaccgcc accgcgcccg cgaccgccga ggccgcactg cctccctgac
     3421 caccggagag gggcagcccc tttcggacag tgagcccgat gccccgatcg cggctgcctc
     3481 ggtctcccgc tcgctccacc accgcgattg ctgcaagacc tgcggtgtga cgggtcgcgt
     3541 ccgagggcag atcgggatgg ccggactcga gaattcgaat gccgcggtca tcggtccact
     3601 cggcccgcac cgagtccccc gggccagcca gggccagacc gaggatgtcg agaccg
//
LOCUS       DASYRV010000039         3589 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_223662, whole genome shotgun sequence.
ACCESSION   DASYRV010000039 DASYRV010000000
VERSION     DASYRV010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3589
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_223662"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1373)
                     /locus_tag="VGQ24_00865"
     CDS             complement(<1..1373)
                     /locus_tag="VGQ24_00865"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEV8453406.1"
                     /translation="MLFVGCALVPMVVLAALSYRQVKQQLYRQSEARLQQANRALGQA
                     IFERLLLLDATLKSITPRAILQLDAAKRIPKAVRKPVRHRPIRSGNQTQTGDLDGRLA
                     MGGIVLERGPKPSTSPNAASRAALIEASQALIAGLDLLARQRFLALEFVGDDGKSIEI
                     FGRLSRHPTLTSRDSSDLRIGLPLIATVPGKGDPSRIYLLRRLVRRGEIRGTFVGEVS
                     PEYLWGTLDVSMPSPTTRVAVLDDSAHVLFRSSKAVIVGWNGTQSTRALVDSMGADSP
                     GRSYLSASSKIALNEAFAAPPWSLVLSESKEKVLEPMAEFTNTFLIVVGFSSLAVLLL
                     SVSQIRRSVLPLEQLQKTTQRIAHRDFSSRVIVNSGDEFEQLAASFNTMADQLGRQFN
                     ALATAAEIDRAVLSATDATAIVDTILARIRDVFPCSVVSVTLGVPDGTKSLISAIQDY
                     GSGGKRL"
     gene            complement(1517..2302)
                     /locus_tag="VGQ24_00870"
     CDS             complement(1517..2302)
                     /locus_tag="VGQ24_00870"
                     /inference="COORDINATES: protein motif:HMM:NF016367.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(5-formylfuran-3-yl)methyl phosphate synthase"
                     /protein_id="HEV8453407.1"
                     /translation="MQLLVSVRSADEVEPALAGGADIIDAKEPDRGSLGPVDRGVLSR
                     ILQRVPDDCGVSMALGDVTRPDEVLAAVHGLELPQRASPMYLKLGFAGVRSPDQIGSL
                     IEIAVSVTSVMAAAPRLVAVAYADPEQAKTIPPALIPPLAQAAGAAGVLLDTHGKDGR
                     GLLEWLPPGALVDWVDLARQAGLLAALAGSLRRRDLALVCRAQPDVLGIRGAACSGGR
                     GGQVSEDRVRRFRLALEWAVRETRDTGAISSRPTAAKYRKLNT"
     gene            2367..3140
                     /locus_tag="VGQ24_00875"
     CDS             2367..3140
                     /locus_tag="VGQ24_00875"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEV8453408.1"
                     /translation="MPEGRRAGVLERKIVLVTGASSGIGRAIALRCARAGADLAITYR
                     KNQAGAEATAQEIRALGRRAEIMRTDVSRPQDIDRLADQLRNAFDRLDVWINNAGADI
                     LTGEGRRLSRREKLDLVLSVDLRGTVLASWAAVDFMRARGGGAIINLSWDHVIQGMNG
                     ENPGIYSAAKGGVASFSKSLARDVAPEIRVNILAPGFIETAFGEQADPSFRQKVVEMT
                     PLGRWGTPEDVANAALFLASDDSAFLTGQTIMVNGGAVM"
     gene            3267..>3589
                     /locus_tag="VGQ24_00880"
     CDS             3267..>3589
                     /locus_tag="VGQ24_00880"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: protein motif:HMM:NF002017.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HEV8453409.1"
                     /translation="MPATKERTYNETEIAERIKELSGWYFEDGWIRRVYKTDGWPTTL
                     MLVNAIGYLAEAAYHHPDLSVTWGRVIVKLQNHAAGGISDKDFELARKIEEVILWRPQ
                     GGALEG"
BASE COUNT          687 a         1130 c         1172 g          600 t
ORIGIN      
        1 atcagacgct tgccgccgct cccgtagtcc tggatcgcgc tgatcagtga cttggtcccg
       61 tcgggtacac ccagcgtgac gctgacgacg ctgcaaggaa agacgtcccg gatgcgcgcc
      121 aggatggtat ccacgatggc ggtcgcgtcc gtggccgaca gcaccgcccg atcgatctcg
      181 gcggcggtgg caagggcatt gaactgacgg cctagctggt cggccatggt gttgaatgac
      241 gccgcgagct gctcgaactc gtcgccgctg ttcacgatca cccggctgga gaaatcccgg
      301 tgcgcgatgc gctgggtggt cttctggagc tgttccagcg ggagtacgct tcgccggatc
      361 tggctcacgc tgagcagcag caccgccaga ctggagaagc ccaccacgat gaggaacgtg
      421 ttggtgaact ccgccatcgg ctccaggacc ttctccttgg actcgctgag caccaggctc
      481 cagggcggcg cggcaaacgc ctcgttcagc gcgatcttgc tcgaggcgga gaggtacgac
      541 cggccggggg agtcggcccc catgctgtcc accagcgctc gggtcgactg cgtaccattc
      601 cagccgacaa ttaccgcctt ggaggacctg aagaggacgt gcgctgagtc gtccagcacc
      661 gccacccggg ttgtcgggga gggcatgctc acatcgagcg tgccccagag gtactcggga
      721 cttacctctc cgacgaacgt gccgcgaatc tcgccccgcc gcaccaggcg gcgcaggaga
      781 tagatccgcg aaggatcccc cttgccgggc acggtggcga tgagcggcaa cccgattctc
      841 agatccgagc tgtcccgcga cgtcagcgtc gggtgccgcg ataaccgccc gaagatttct
      901 atgcttttcc cgtcgtctcc cacgaactcg agcgcgagga agcgctggcg cgcgagcagg
      961 tccagcccag cgatgagcgc ctggctggcc tcgatcaggg cggcccgcga ggcggcattg
     1021 ggactggtag atggcttggg accccgctcc agcacgatgc cgcccatcgc caagcggcca
     1081 tcgaggtcgc cggtctgagt ctgattaccc gatctgatag gccggtgtcg caccggcttg
     1141 cgcacggctt tggggatgcg tttggcggcg tcgagctgaa gtatggctcg gggtgtgatg
     1201 ctcttgaggg tggcgtcgag caacaagaga cgctcgaaaa tggcctggcc cagggcgcga
     1261 ttcgcctgtt gaagcctggc ttcgctctgg cggtagagct gctgcttcac ctgacggtaa
     1321 gacagtgcgg ccagcaccac catcgggacc aaggcgcagc ccacgaagag cacgagtaac
     1381 cggcgcccaa acctgcttcg cagcggtgta gacggaaaag gcacaattgg gcccgggcgt
     1441 gggagataga cggttacctg cgaccgtcgt cgcaatcccc cgtaacgagc aagtgttatg
     1501 ccctgtgaaa tggacgctaa gtgttgagtt tacggtactt agctgcggtt ggtcgggaag
     1561 aaatcgcccc ggtatcacgc gtttcgcgaa ccgcccattc gagagccagc cggaaccggc
     1621 gcacccggtc ctccgatact tgaccccccc tgcccccact gcaggccgct ccccggatac
     1681 caagcacatc gggttgtgcc cggcaaacga gagccagatc gcgacgccgc agactcccgg
     1741 ccagtgccgc gaggaggccg gcttggcgcg ctaggtccac ccagtccacc agggcaccgg
     1801 gaggaagcca ctccagcaga ccccgaccgt ctttgccgtg agtatcgagg aggacgccgg
     1861 cagcgcctgc tgcttgcgcg agtggaggga tcagggccgg tggaatagtc ttcgcctgtt
     1921 cgggatccgc gtacgccacg gccacgagcc ggggagcggc ggccatcacg ctggtcaccg
     1981 agacggcgat ctcgatcagg gacccaatct gatctggaga tcgtacgccc gcaaaaccca
     2041 acttcaagta catcggcgac gcccgctgcg ggagctcgag tccatggacg gcggcaagaa
     2101 cctcgtccgg ccgggtcacg tcgccgagtg ccatactgac cccacaatcg tccggaaccc
     2161 gctgaagaat ccggctcaac acgccgcgat ccactggccc caacgagccc cggtcgggct
     2221 ctttcgcgtc gatgatgtcg gccccgccgg ccagcgccgg ttccacctca tctgccgacc
     2281 tcacactcac cagcagctgc aacgatgctc ccttgtgaga tgctaacgcg ctgatatgtt
     2341 aggatttaag aacttactac gagccggtgc cggaggggag gcgggcggga gtgctggagc
     2401 ggaagatcgt gctggtcacc ggagcgtcga gtgggatcgg ccgtgcgatc gcgctccgtt
     2461 gcgctcgcgc cggggccgac ctcgcaatca cctaccggaa aaaccaggcc ggtgccgaag
     2521 ccaccgcaca ggagattcgt gccctgggtc ggcgagccga gatcatgcgg accgatgtca
     2581 gccggcccca ggatatcgat cggctggccg atcagcttcg caacgcattc gatcggctcg
     2641 atgtctggat caacaacgcc ggtgcggaca tcctcaccgg cgaaggccgc cggctctcga
     2701 ggagggagaa gctcgatctc gtgctgtcgg tcgatctgcg agggacggtg ctcgcgtcct
     2761 gggccgcggt ggacttcatg cgggcccgcg gaggcggggc gattatcaat ctctcatggg
     2821 atcacgtgat ccagggcatg aacggcgaga acccgggcat ctattcggcg gcaaaggggg
     2881 gtgtcgccag cttcagcaaa tcgctggcgc gtgacgttgc gcccgagatt cgagtcaaca
     2941 ttctcgcacc gggcttcatc gagaccgcct tcggtgaaca ggccgacccc agcttccggc
     3001 agaaggtcgt cgagatgacc ccactgggtc gttggggcac ccccgaagac gtggccaacg
     3061 cagcactctt cctggcttcg gatgattcgg catttctcac cggacaaacg attatggtca
     3121 acgggggagc ggtgatgtga aggcgctatg ggctattggc tacgggctac tccggttctc
     3181 cgacagcgcc aggacagcag tcaagagcca atagccaata gctaagagcc aatagctaac
     3241 agccaatagc catcaaggag gtcaagatgc cggccacgaa agagcgaacc tacaacgaga
     3301 ccgagatagc cgagcggatc aaggagctgt ccggctggta ctttgaagac ggctggatcc
     3361 gccgggtcta taagaccgac ggctggccca cgacgttgat gctggtgaat gccatcggct
     3421 atctggccga ggcggcgtat caccaccccg atctgagcgt gacctgggga agagtcatcg
     3481 tgaagctgca gaatcatgcc gccggcggga tatccgacaa ggactttgag ctggcccgga
     3541 agatcgagga agtcatcctt tggcggcccc agggtggcgc gctcgaggg
//
LOCUS       DASYRV010000040         3438 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3547592, whole genome shotgun sequence.
ACCESSION   DASYRV010000040 DASYRV010000000
VERSION     DASYRV010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3438)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3438)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3438
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3547592"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1610)
                     /locus_tag="VGQ24_00885"
     CDS             complement(<1..1610)
                     /locus_tag="VGQ24_00885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453410.1"
                     /translation="MTHPSSSNNPETPATEGSQASAVPASRAQNAAALSRELGDFLVE
                     FSIVLHKRSMYPPGHPHLQNSAVRFVNRVSSLLEGRESVTLGVARHRLVIESVTTDPS
                     NALLRDLAHRLHRHRIASVQLMRGATLEEVESVLTALSEDPQRGDGPIGRRLDKVGSW
                     NHIRLRAMGFDKFTLQRSNASGTVTEGSAAERDAWVELARLALSTEPGDEATDDADPL
                     VVAQAIGQKAGEVAYDRVVLGYLSKVAEEMSGRKSAGEDQLGQRLSRMIGALDPHTLR
                     RLLETGADLAGRRKFALNASQILAADAVMEVVEAAAQATNQTISHNLLRLLHKLAHHA
                     EEGGVQVRAEADRALRNNVARLIGDWELEDPNPTRYTAMLEGMVRSSPDEPGVAAESG
                     CDPEIVVKMALELGCIGPAVYAAANTLIAGKELARLAQLLETMPHTEASEALWGHVAT
                     AERLEAELAAIPMDHEAVAILVKRIGVQAANSLLDRLASADDRSTRATILKQLMTLGP
                     QAGNLAVARLADAPWYVQRNILVLIGRLG"
     gene            1858..3189
                     /locus_tag="VGQ24_00890"
     CDS             1858..3189
                     /locus_tag="VGQ24_00890"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase"
                     /protein_id="HEV8453411.1"
                     /translation="MADTTLMDKLVSLCKRRGFVFQSSEIYGGLGSVWDYGPLGVELK
                     RNVKDRWWGAMVQARDDIEGLDAAILMHPKVWEASGHVAGFTDPLVDCRHCKNRFRAD
                     DPRIKGTPGQPDAQCPICGSRGSLTEPRMFNLMFKTFMGPVEDSAAVVYLRPETAQGI
                     YVNYLNVLQSSRQRIPFGIAQIGKAFRNEITPGNFIFRTREFEQMEMQFFVQPGTDAE
                     WFERWREWRMEWHRSLGLSPAKLQWHQHSGSELAHYAKAAFDIQYEFPFGWQEIEGIH
                     NRGDFDLSRHQEYSGKKLEYFDQAQNQRYLPYIVETSAGADRVALTLLVDAYREEVVD
                     GETRVVLGLSPSVAPIKAGVFPLVKKDGMPELATTLYNDLRQQFTCFYDDSGAIGRRY
                     RRMDEAGTPFGLTVDGDTLANRTVTVRHRDSMQQERVGLDQVAGYIKDRIQ"
     gene            3194..>3438
                     /locus_tag="VGQ24_00895"
     CDS             3194..>3438
                     /locus_tag="VGQ24_00895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453412.1"
                     /translation="MTMRLADFEGMVRRLCSEVPGHFFEGIAEVVVSPRTMPHPDREE
                     IFTLGECDPLPMEVGSGIEGLQSRIVLYHGSFAALARL"
BASE COUNT          590 a         1109 c         1080 g          659 t
ORIGIN      
        1 ccgagccggc cgatcagcac caggatgttc cgctggacgt accatggcgc atccgccaac
       61 cgcgccaccg ccagattccc ggcttgtggg ccgagcgtca tgagctgctt caggattgtg
      121 gcgcgggtgg agcgatcatc cgcgctggcc agccggtcga gcagcgaatt cgcggcttgg
      181 accccgattc gcttgaccag gattgcgact gcctcatggt ccatcggtat ggccgccagc
      241 tcggcttcaa ggcgctcggc ggtagccaca tgaccccaga gggcctcgct cgcctccgtg
      301 tgcggcatgg tctccagtaa ttgggcgagt cgagccaact cctttccggc gatcagcgta
      361 ttggccgccg cgtacaccgc cgggcctatg caacccagct ccagcgccat cttcacgacg
      421 atttctggat cacagccgct ctcggcagcg acaccgggct cgtccgggct gctccgcacc
      481 atcccctcca gcatggccgt gtagcgcgtg ggattgggat cttccagctc ccagtcgccg
      541 atcagacgcg ccacattgtt ccgtagcgcg cggtccgcct ctgcccggac ctggacgcca
      601 ccctcctcgg cgtggtgggc gagcttgtgt aggagccgca acaggttatg ggaaatggtc
      661 tggttggtag cctgcgcagc tgcttcgacc acctccataa cggcatcggc cgccagaatc
      721 tgcgatgcat tcagcgcgaa ctttcgcctt cccgccagat ccgctccggt ctcgagcaag
      781 cgccgaaggg tatgcggatc gagcgccccg atcatgcggg agaggcgttg acccagctga
      841 tcctcacccg cgctcttccg gcccgacatc tcctcggcga ccttcgacag atacccgagt
      901 acaacccggt cgtacgctac ctcaccggcc ttctgtccga tcgcctgggc caccaccagc
      961 ggatcggcat catcggtcgc ttcgtcgccc ggttcggtcg agagagcgag ccgcgccagc
     1021 tccacccagg catcccgttc cgctgccgat ccttcggtga ccgtcccgga ggcattcgag
     1081 cgctgcagtg tgaacttgtc gaatcccatc gctctgagcc ggatgtgatt ccacgacccc
     1141 accttgtcca gccgccgccc gatcggaccg tcgccccgtt gcggatcctc gctcagcgcc
     1201 gtcagtacac tctcgacttc ctccaacgtt gcgccgcgca tgagctggac cgacgcaatc
     1261 cggtggcggt ggaggcggtg cgccaggtca cgcagcaggg cgttgctcgg atcggtggtt
     1321 accgactcga tcaccaggcg gtgcctcgcg accccgaggg tcacggactc ccggccttcg
     1381 agaagtgagc tcacacggtt gacgaagcgc accgcggaat tctgcaggtg ggggtgtccc
     1441 ggcgggtaca tcgagcgctt gtgcaagacg atagagaact ccaccaggaa gtctccgagc
     1501 tcccgcgaga gggctgccgc attctgagct cgcgacgccg gtaccgcgga cgcctgagac
     1561 ccctccgtgg caggagtctc tggattattc gatgagctcg ggtgcgtcat cggcatgcct
     1621 cttggagcgt gcgcggggtc ttaagagagg ccggaggggc aagttctgag ccccggcagg
     1681 gtgtgcacct aactgattga ggcgggactg gttaggtacc tttgagaagc cgggtcttca
     1741 gggttcgccc ctgccatgtc gcggaaaatt gctacttctt gccacccgct tccttgccgt
     1801 acctggccgc cctatcttcc cccgctggtc tcgatccccc tcctttatcg gaactcgatg
     1861 gctgacacga ctttgatgga caagctggtt tccctctgca agcgccgggg tttcgtcttc
     1921 cagtcctcgg agatttacgg ggggctcggc tcggtgtggg actacggtcc cctcggggtg
     1981 gagctgaagc ggaatgtgaa ggatcgctgg tggggagcca tggtgcaggc tcgggacgac
     2041 atcgaaggcc tcgacgccgc gatcttgatg catcccaaag tctgggaagc atcgggacac
     2101 gtggccggct ttaccgatcc cctcgtcgac tgccgccact gcaagaaccg cttccgagcg
     2161 gacgatcccc gcatcaaggg gacgccgggc caaccggacg cgcagtgtcc catctgcgga
     2221 agccgcggct cgctcaccga gcctcgcatg ttcaacctga tgttcaagac cttcatgggt
     2281 ccggtggagg attcggccgc cgtggtctac cttcgacccg agaccgcgca gggcatctac
     2341 gtcaactacc tgaatgttct ccagtcgtca cgccaacgga tccccttcgg aatcgcgcag
     2401 atcggcaagg cctttcgcaa cgagatcacg ccgggaaatt tcattttccg cactcgtgaa
     2461 ttcgagcaga tggagatgca attcttcgtg cagcccggca ccgatgccga gtggttcgag
     2521 cgctggcggg agtggcggat ggagtggcat cgatccctgg gactctcccc ggccaagctc
     2581 cagtggcacc agcacagcgg gagcgagctg gcacactacg cgaaggcggc gttcgacatc
     2641 cagtacgagt tccccttcgg ctggcaggag atcgaaggca ttcacaatcg tggggatttc
     2701 gatctgagcc ggcaccagga gtattcgggc aagaagcttg agtactttga ccaggcgcag
     2761 aatcagcgtt acctcccata catcgtggag acctcggccg gagccgaccg ggttgccttg
     2821 acgctcctgg tcgacgcgta ccgcgaggag gtggtggacg gggagaccag agtcgtgctg
     2881 gggctctcac ccagtgtcgc accgatcaag gcgggagtct ttccgctggt gaagaaggac
     2941 gggatgccgg agctcgcgac tacgctgtac aacgatctgc ggcagcaatt cacctgcttc
     3001 tatgacgaca gtggtgccat tggccggcgg taccgccgga tggacgaggc cggcaccccg
     3061 ttcggcctca cggtggatgg tgacactctg gcgaaccgta cggtcaccgt ccgccatcgg
     3121 gattcgatgc agcaggagcg cgtcggtttg gatcaggtgg cgggatacat caaggatcgc
     3181 atacaatgat tccgtgacca tgcgtttggc ggatttcgaa gggatggttc gccggctctg
     3241 cagcgaggta cccggccact tcttcgaggg tatcgccgag gtcgtcgtct caccacggac
     3301 tatgccccac cccgaccgcg aggagatctt taccctgggt gagtgcgatc cgctccccat
     3361 ggaggtgggc agcggcatag agggactcca gagccgcatc gtactttatc acgggtcttt
     3421 cgcggcgttg gcgcggct
//
LOCUS       DASYRV010000041         3825 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3746858, whole genome shotgun sequence.
ACCESSION   DASYRV010000041 DASYRV010000000
VERSION     DASYRV010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3825
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3746858"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2053)
                     /locus_tag="VGQ24_00900"
     CDS             complement(<1..2053)
                     /locus_tag="VGQ24_00900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HEV8453413.1"
                     /translation="MAERLTLPVLPLREVVLFPGVTAPIGAGRPATLRAIEAALAGPD
                     RLVFAVSQRQNVESVTSEALYTIGTIARIGQLQRGLSGMQLLLHGERRGIAIHYSERD
                     GYLQAIVREAEEMLPLQAEDPAFVALHREARARAAELGQKSGLPDDVVQQVLAGVNEA
                     GKFADLVAGYIDITPAQRQMLLETLSVEERLRRVLVHVQRQIGLVDAQEDIKSQVQEE
                     LGERQREMFLREQLKTIQRELGEGDERDDLQELKEKLAALDLTPDARKEVDREFGRLA
                     RIGRESMESQVIRTFLENVAELPWNERSREHLELPEAQRILDEDHYALGDVKDRVLEF
                     LAVRQLRLQQEASERAGEAGADGAGQLEEAKAEQKAEEVAAGESTDVPQATATVPAPN
                     APPRGNEDDRIAKGPILLFVGPPGVGKTSVAKSIARAMGRKYVRISLGGARDEADIRG
                     HRRTYVGAMPGRIIHGMKQAGTKNPVFLLDEVDKLGVSFQGDPASALLEVLDPAQNDT
                     FVDHYLGVPFDLSEVLFIATANFIQNIPGPLLDRMEIVEFAGYTEREKQEIARKYLIP
                     RQFSENGVSPEQLTITDDALSEVITSYTRESGVRQLEREIGRLARKVARKIASQEVER
                     ITIERDMVDDLLGRPKVHPEKKARDDEVGVATGMYYTPTGGDIMFVEASTMRGKGELV
                     LT"
     gene            2388..>3825
                     /locus_tag="VGQ24_00905"
     CDS             2388..>3825
                     /locus_tag="VGQ24_00905"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEV8453414.1"
                     /translation="MTEPGDKPLPARLAEALGAAYTIEGEIGRGGMGVVYRARDERLQ
                     RRVAIKVLPPELAFQQDIRERFTREAQTAARLSHPHIVPIHSVGEGGGLVYFVMGYVD
                     GESVAARIRRRGQLPVEEARRIMKETADALSAAHSLSVIHRDIKPDNILLEGTRGRVM
                     VTDFGIAKALSSSGATLTGIGVAIGTPAFMSPEQAAGERDIDGRSDLYSLGIVTYQML
                     TGQLPFNAPSVAGILMKQITEAAPDLRRRRPDIPEDLALAVARCLEKDPQNRWPTADA
                     LRRALESRTTTGYEPTGAPRGGGVGASARAGGQRFGRDERPLRGVLANDKGSSDDRSP
                     RDAGRVARVPAVPLSRRPGLQPPRGLPSRTRDRHPRRDRHNEMPVPDTGEPRIIQKVR
                     AQFASWAAVSAGCMGINVATGIEHPWFLFPMFGMGIGLLRNYANLWQAGYSWRDVLSR
                     PPAPDAFEATMTKGGRAGRPLPLPSAEDY"
BASE COUNT          637 a         1302 c         1222 g          664 t
ORIGIN      
        1 cggtcaggac cagctcgcct ttaccacgca tggtcgacgc ctccacgaac atgatgtcgc
       61 cgccggtcgg ggtgtagtac atcccggtgg ccacacctac ctcgtcgtcg cgggccttct
      121 tctccggatg gaccttgggc cgaccaagca ggtcgtccac catgtcacgc tcgatcgtga
      181 tccgttcgac ctcctgagag gcgatctttc gggccacctt ccgggccaac cggccgatct
      241 cgcgctccag ctgccgcact cccgattcgc gagtgtagct ggtaatgacc tccgacagcg
      301 catcgtcggt gatggtcagc tgctccggac tgacgccatt ctcgctgaac tggcgaggga
      361 tgaggtattt ccgggcgatc tcctgcttct cgcgctcagt gtatccggcg aactcgacga
      421 tctccatccg gtcgagcagc gggccgggga tgttctgaat gaagttcgcc gtcgcgatga
      481 acagcacctc actcagatcg aacggcacac cgaggtagtg atcgacgaac gtgtcgttct
      541 gggctggatc gagcacctcg agcaacgcgc tggccgggtc gccctggaac gagacaccca
      601 gcttgtctac ctcgtccagc aagaagaccg gattcttggt gcctgcctgc ttcatgccat
      661 ggataatccg accgggcatg gcaccgacgt aggtgcgccg atggccccgg atatcggcct
      721 cgtcgcgcgc gccgccgagc gagatccgga cgtacttccg tcccattgcc cgggcgatcg
      781 acttggccac cgaggtcttg cccacgccgg gaggccccac gaagaggagg attggaccct
      841 tggcgatccg gtcatcctcg ttgccccgcg gtggcgcatt gggggccgga accgtcgcgg
      901 tggcctgagg cacgtcggtg gactccccgg cggcgacctc ctccgccttc tgctcggcct
      961 tggcctcctc gagttgaccc gcgccgtctg ccccagcctc gccggcgcgc tccgacgctt
     1021 cctgctgcag ccggagctgg cggacggcca gaaactccag cacccgatcc ttcacatcac
     1081 cgagtgcgta gtgatcctca tcgaggatgc gctgcgcctc cggcagctcg aggtgctctc
     1141 tgcttcgctc gttccacggc agctcggcga cgttctccag aaacgtccgg atgacctgcg
     1201 actccatcga ctcgcgtccg atccgggcca gccggccgaa ctcgcggtcg acttcctttc
     1261 gggcatcagg cgtcaagtca agcgcggcaa gcttctcctt caactcctgg aggtcgtccc
     1321 gctcatcgcc ctcgcccagc tcacgctgaa tggtcttgag ctgctcgcgg aggaacatct
     1381 cccgctgccg ctcgcccagc tcttcctgca cctgcgattt gatgtcctcc tgcgcgtcga
     1441 ccaggccgat ctggcgctgg acgtgaacca gcacccgccg gagccgctct tcgacgctca
     1501 gggtctccag cagcatctgc cgctgggcgg gggtgatatc gatataaccg gctaccaggt
     1561 cggcgaactt gccggcctcg ttcacgccgg ccagcacctg ctggaccacg tcgtcgggca
     1621 agccggactt ctggcccagc tcggccgcac gggcccgggc ctctcgatgc agggccacaa
     1681 acgcgggatc ttcggcctgc agcggaagca tttcttccgc ctcacgcacg atggcctgga
     1741 ggtaaccatc ccgctcgcta tagtggatgg caatgccgcg ccgctcgcca tggagcagga
     1801 gctgcatgcc cgacaggccg cgctgaagct gcccgatgcg cgcgattgtg ccgatggtgt
     1861 agagtgcttc cgaggtcacg ctctcgacgt tctgccgctg ggatacggcg aagaccagac
     1921 gatctggacc ggccagcgcc gcctcgatcg cgcgcagcgt ggccggccgc ccagcgccga
     1981 tcggcgcagt gacacccgga aagaggacga cctcccgtag cgggaggacc ggtagggtca
     2041 atctttcggc cattcaacta ctccttagaa gcccccactt ggggcgaaat gacagtccca
     2101 cggatcacac aacgaatgat ttgcaccgtc cgtgccaccc gcgaagtttc tgacgacctg
     2161 gtttggggcg tcaatagaac cattggccgc gttctacagt tcccatcgtg gctgaaaccc
     2221 gggtcacgca agctcttttg tcggtggagg gaggccgcta ctgccattat ggcccctaag
     2281 tagctgggag cttggagtca gctaacgttg ccgctcgacc gtcaggagta cagattgtct
     2341 gccatgctgg acgagcgtgt cttggggtac aagaggcagc gggacgcatg acggaaccgg
     2401 gcgacaagcc gctccccgcc cgtctggcgg aggccttggg tgccgcgtac accatcgagg
     2461 gggagatcgg gcggggtgga atgggggtgg tctaccgcgc gcgcgacgag cggctccagc
     2521 gccgcgtcgc cattaaggtg cttccccccg agctcgcctt ccagcaggac atccgtgagc
     2581 ggtttacccg tgaggcgcag accgctgccc ggctctccca tccgcacatc gttcccatcc
     2641 acagcgtcgg cgaaggcggg gggctggtct acttcgtcat gggctatgta gacggcgagt
     2701 cggtggccgc ccggatccgg cggcggggcc agctcccggt ggaggaagcc cggcgtatca
     2761 tgaaggagac ggcggacgct ctcagcgccg cccattccct ctcggtcatt caccgcgaca
     2821 tcaagccgga caacatcctg ctcgagggca cccgcggccg ggtcatggtc accgatttcg
     2881 gcatcgccaa ggcgctctcg tcgtccggcg cgacgctgac cggcatcggt gtggcgatag
     2941 ggacaccggc gttcatgagc ccggagcagg cggcgggcga gcgggacatc gacggccggt
     3001 cggatctcta tagcctgggc attgtgacat accagatgct caccggacaa ctgcccttca
     3061 acgccccatc ggttgccggc attctgatga agcagatcac cgaagccgca cccgatctgc
     3121 gccgcagacg gccggatatc ccggaagacc tggccctcgc ggtggcccgc tgcctggaga
     3181 aggatcccca gaaccgctgg cccacggcag atgcgctgcg gcgcgccctg gagagtcgga
     3241 caaccacggg gtatgagccc acgggagcgc cgcgaggcgg cggggtgggt gcctccgcca
     3301 gggctggtgg gcaacggttc ggcagggatg agcgaccatt acgcggtgtg ctggcgaacg
     3361 acaagggttc ctcagacgat cgatcgccgc gagatgccgg acgagtcgcg cgggttcccg
     3421 ctgtgccgct gtcccgccgc cccggtttgc aacctcccag aggactcccg tcccgcaccc
     3481 gtgaccggca cccgagacgc gaccgccata acgagatgcc ggtaccggac accggcgagc
     3541 ccaggatcat ccagaaggtc cgcgcccagt tcgccagctg ggccgcggta tcagcgggat
     3601 gcatgggcat caacgtcgcc accgggatcg agcacccgtg gttcctgttc ccgatgttcg
     3661 gcatgggaat cggactgctt cggaactacg ccaacctctg gcaagcggga tacagctggc
     3721 gagatgtact gagccgtccg ccagctccgg atgcgttcga agccacgatg accaagggtg
     3781 ggcgcgctgg ccggcccctg ccgctcccga gcgcggaaga ttacg
//
LOCUS       DASYRV010000042         7525 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3549215, whole genome shotgun sequence.
ACCESSION   DASYRV010000042 DASYRV010000000
VERSION     DASYRV010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7525
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3549215"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..906
                     /gene="rpsB"
                     /locus_tag="VGQ24_00910"
     CDS             <1..906
                     /gene="rpsB"
                     /locus_tag="VGQ24_00910"
                     /inference="COORDINATES: protein motif:HMM:TIGR01011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEV8453415.1"
                     /translation="ERMAQPQLQDLLEAGVHFGHQTRRWNPKMRRFIFAERSGIYIID
                     LQKTLRQIAKAQELLRNVVLKGEGVLFVCTKKQLKAIVQAEAEACAAYYVTERWLGGM
                     LTNFQTLKKQIRRLRELEQGAAEGDFENYTKKEKLLFERERVKLSRNLEGVKNMGRLP
                     GALFVVDAKKEKIAVAEANKLGIPVVAIVDTNADPDVITVPVPGNDDAIRSVSLITAA
                     LSDVIKEARTQMPMREVTEDLEAETYSTDAGSEGDTEADRKRRRPRRKRRPKPEAIAA
                     RLKTDADAEGVAEAAAPSAASDAGA"
     gene            1003..1608
                     /gene="tsf"
                     /locus_tag="VGQ24_00915"
     CDS             1003..1608
                     /gene="tsf"
                     /locus_tag="VGQ24_00915"
                     /inference="COORDINATES: protein motif:HMM:NF013085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HEV8453416.1"
                     /translation="MASTMISPKDVSELRTRTGAGMMDCKRALEEARGDMDKASEILR
                     KKGIAKAEKRTGKTSSQGLVVSYIHHNSQVGVLLELNSETDFVARTDDFAELAREIAI
                     HIASADPIGVNPEDVPAELIERERRIAEEQAAKEGKPENIRGKIVEGKIKKFVAERTL
                     LEQPFVRDDKKTVGQLIKEASGKLGEAISVRRFARFRIGEV"
     gene            1608..2321
                     /gene="pyrH"
                     /locus_tag="VGQ24_00920"
     CDS             1608..2321
                     /gene="pyrH"
                     /locus_tag="VGQ24_00920"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEV8453417.1"
                     /translation="MALAYTRALLKISGEALAGDKSFGLDYHMVEAFAEEIKAVHALG
                     VHLALVVGGGNIIRGTAASREGLDRVSADYMGMLATVINALALQDVLEKIGVNTRVMT
                     AIRMESLAEPYIRRRAIRHLEKGRLIIFAAGTGNPFFSTDTAGVLRALEIEAQVILKA
                     TNVDGIYTNDPRKDPKAILIRELTYQEAIVKNYAVMDANAFGLCKANQLPIVVFNINQ
                     PGAIKRVLEGDREIGTIVR"
     gene            2360..2872
                     /gene="frr"
                     /locus_tag="VGQ24_00925"
     CDS             2360..2872
                     /gene="frr"
                     /locus_tag="VGQ24_00925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEV8453418.1"
                     /translation="MHKAVESTKREFSSIRSGKASTSLLDIVRVEAYGGHVPLNQVAM
                     VAAPEPRLLTVQPFDKSLAQAIEKAIRDSDLGLNPATQGNLIRVPLPALSEERRKDLV
                     KVVHKLGEEGRIAVRHARTETLSKVKKLEKISEDDKRHAEKEVQKLTDEHIKQIEALI
                     HAKEAEILEV"
     gene            2877..3620
                     /gene="uppS"
                     /locus_tag="VGQ24_00930"
     CDS             2877..3620
                     /gene="uppS"
                     /locus_tag="VGQ24_00930"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl diphosphate synthase"
                     /protein_id="HEV8453419.1"
                     /translation="MSNELLRRVRVHGAVPAHIAIIMDGNGRWAKGRSLPRPLGHHAG
                     MKAVREVVEGCLEAGVGVLTLFAFSQENWQRPAGEIEALMKLLEEYIAREANELRGQG
                     VSVRILGHLERLGPGARRAVERIMAETAGGQALALNLCISYSARAEIARAARLLAESA
                     AAGLLDPSNIDEDAVGRMLYTAEWPDPDLLIRTSGEMRISNFLLWQLAYAELYVTPVL
                     WPDFTRRHLFEAILEFQRRERRFGRVEAG"
     gene            3617..4489
                     /locus_tag="VGQ24_00935"
     CDS             3617..4489
                     /locus_tag="VGQ24_00935"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: protein motif:HMM:NF013327.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004605 - phosphatidate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0016024 - CDP-diacylglycerol biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEV8453420.1"
                     /translation="MSMDSNLVRRVGFAVIAIPFVLAVVWYGGVPFVLVLVAAGAVGA
                     RELFDLAARQGIRAIRSFGLASAAALAPITYAAVVAADVRATVSAAWPYVTALWLIVL
                     LTLVLASRNPADKPLSAAAVTLLAVVYTSALPAFLIAIRHNRYPERSWAGAWLVFFPL
                     VVTWVCDTAAMFGGRGFGGPKLAPTVSPGKTWSGSTAGLVGGTLMAPLFGAVILPRVG
                     VQVPLWQLVVIAGVLSVIGQIGDLAESLFKREAGVKDSSHLIPGHGGVLDRFDSLYFV
                     IPTAAALYRWFGVI"
     gene            4489..5676
                     /gene="dxr"
                     /locus_tag="VGQ24_00940"
     CDS             4489..5676
                     /gene="dxr"
                     /locus_tag="VGQ24_00940"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEV8453421.1"
                     /translation="MSVAQSQSRAQASAPSEAVPPARRGVALLGSTGSIGRSTLDVLR
                     RHGEHFRLVALTAGRNQNELDSQVAEWRPSYAGLAGIAGDGRWPTGPDVLVEAATHPD
                     ADIVVNAVVGAAGLEATLAALRAGKRVALANKETLVMAGDLVAQAACAGGGEIVPIDS
                     EHSAVLQCVTGRDDDSVARLILTASGGPFREWPAERVWHATVEEALRHPTWRMGHKIT
                     VDCATLANKALELIEAHYLFRLPYDALAVVVHPQSVVHAFVEFCDGSVLSQLGFPSME
                     LPILYALTHPERLPDAGVRRFDPVAAGPLTFEPVRTDVFRALGCGIAAGRAGGTAPAV
                     FNAANEVAVAAFLRGAIPFGRISETIEQVLDAHTPSAASSVESVRAADGWAREQAEQS
                     VRP"
     gene            5676..7040
                     /gene="rseP"
                     /locus_tag="VGQ24_00945"
     CDS             5676..7040
                     /gene="rseP"
                     /locus_tag="VGQ24_00945"
                     /inference="COORDINATES: protein motif:HMM:TIGR00054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEV8453422.1"
                     /translation="MVFTILALIVVLGVLIFIHEAGHFVAAKWAGIYVHRFSLGLGPP
                     IPWLTFRRGETEYTISWLPLGGYVKMASREEDIGSSALEGGAPSQPAPPDRVFEAKPI
                     WKRMVVILAGVTMNALFAWAVFAFLAYKNGRQIDPVTTVGRVVEELVPPEAAALKEIR
                     PGARIIRVNGDSAKSWDDVVSAIADTPEREVRIELDDGSVVVLPIHPDALEQRLKAAQ
                     ALQPFRAPVVGQVLPDKPAARAGIQEGDTIVAVNGRRVEQWYDLLELLQASPGRNLTI
                     DVARGAQRLSFKLKAYVDTIPGLDGKPRPVGRIGVAVGTGSTSEKLTLGQAISEGGRA
                     TLKASTQIVRTVRGLFSGRISGRTVGGPILIGQLAGQSARLGLDTFLGFMALISINLA
                     ILNLLPVPVLDGGQFLFLLAEAIIRRPLPVKLRERLTTVGLVLIVLLMGLAFSNDLRR
                     IFGG"
     gene            7130..7390
                     /gene="rpsO"
                     /locus_tag="VGQ24_00950"
     CDS             7130..7390
                     /gene="rpsO"
                     /locus_tag="VGQ24_00950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEV8453423.1"
                     /translation="MSFDKQSVVAQHRAHDTDTGSTKVQVALLTERINSLTDHFRTHL
                     KDHHSRRGLLKMVGTRRRLLTYLKRSDLATYRALIEQLGLRH"
BASE COUNT         1342 a         2355 c         2561 g         1267 t
ORIGIN      
        1 gaacgcatgg cacagcccca actgcaggac ctgctcgaag ccggtgtgca tttcggccac
       61 cagactcgcc gatggaaccc gaagatgcgg cgcttcatct tcgccgagcg ctcgggcatc
      121 tacatcatcg atcttcagaa gaccctccgg cagatcgcca aggcccagga gcttctccgg
      181 aacgtcgtgc tcaagggcga gggggtgctc ttcgtctgca ccaagaagca gctcaaggcc
      241 attgtgcagg ccgaggcaga ggcctgcgcc gcgtactacg tcaccgagcg ctggctgggt
      301 ggcatgctca cgaacttcca gaccctcaag aagcagattc gccggcttcg ggagctggag
      361 cagggtgcgg ccgagggcga cttcgagaac tacaccaaga aagagaagct cctcttcgag
      421 cgcgagcggg tgaagctctc ccgcaacctc gagggtgtga agaacatggg ccggctgccc
      481 ggcgcgctct tcgtggtcga cgccaagaaa gaaaagatcg ccgtcgcgga ggccaacaag
      541 ctggggatcc cggtggtggc catcgtggac accaacgccg accccgacgt gatcacggtg
      601 ccggtcccgg gcaacgacga cgccatccgg tcggtctccc tcatcacggc tgccctgtcc
      661 gacgtgatca aggaagcgcg gacccagatg ccgatgcgtg aggtcaccga ggacctcgag
      721 gccgagacct acagcaccga cgccgggagc gagggcgaca ccgaggccga tcgcaagcgc
      781 cgccggcccc gccggaagcg gcggcccaag cccgaggcaa tcgcggcccg actgaagacc
      841 gatgccgatg ccgagggagt tgccgaggcg gcagcaccca gcgcggcgag cgacgcgggc
      901 gcgtaagcgg ctgagccgga agcattctcc gccgctctag gcctgtgggg ccgggagcgg
      961 cggctttact attcacccct gagctgaacc gggctggaga ctatggcaag cacgatgatt
     1021 tcaccgaagg acgtaagcga actgcggacc cgcaccggcg cgggcatgat ggactgcaag
     1081 cgggcgctgg aggaggcccg gggcgacatg gacaaggcct cggagatcct gcggaagaag
     1141 ggaatcgcca aggcggagaa gcggaccggc aagacatctt cgcaggggct ggtggtgagc
     1201 tacatccacc acaacagcca ggttggggtg ctgctggagc tcaactccga gaccgacttc
     1261 gtggcccgca ccgacgattt cgccgagttg gcgcgcgaga tcgccattca catcgcgtcg
     1321 gccgatccga tcggggtcaa tccggaagat gtgcccgccg agctgatcga gcgggagcgg
     1381 cgtatcgccg aggaacaggc ggccaaggag ggcaagccgg agaacatccg gggcaagatc
     1441 gtcgagggca agatcaagaa gtttgtggcc gagcgcaccc tgctggagca gccgttcgtg
     1501 cgggatgaca agaaaacggt gggccagctg atcaaggaag cttccggaaa gctgggcgag
     1561 gcaatctcgg tccggcgctt tgcgcggttc aggatcgggg aagtttgatg gccctcgcct
     1621 acacccgcgc cctgctcaag atttcgggcg aggcgctggc cggcgataag agttttggcc
     1681 tcgactatca catggtcgag gcgttcgcgg aggagatcaa agcggtgcac gcgctcggcg
     1741 tgcacctggc gctggtcgtg ggtggcggga acatcatccg cggcaccgcc gccagcagag
     1801 aagggctcga ccgggtatcc gccgactaca tggggatgct ggccaccgtc atcaacgcac
     1861 tggcgttgca ggacgtgctg gaaaaaattg gagtgaacac ccgggtcatg acggccattc
     1921 gcatggaatc gctggcggag ccctacatcc ggcggcgggc cattcggcac ctggagaagg
     1981 ggaggctcat catctttgcc gcaggcaccg gcaatccgtt cttctccacc gacacggccg
     2041 gggtgctgcg ggctctggag atcgaggccc aggtgatcct caaggccacc aacgtggacg
     2101 ggatctacac caacgatccc cgcaaggacc ccaaggcgat cctcatccgc gagctcacct
     2161 accaggaagc catcgtcaag aactacgccg tcatggacgc caacgccttc ggactctgca
     2221 aggccaacca gcttcccatc gtggtcttca acatcaacca gcctggggcc atcaagcggg
     2281 tgcttgaagg cgaccgggag attgggacca tcgtccgatg agcaccatcc ccgaactgac
     2341 aaggcatgcc cgagacctga tgcacaaggc ggtcgagagc accaagcgcg agttcagctc
     2401 gatccggagc ggtaaggcca gcacgtcgct cctggatatc gtgcgggtgg aggcgtacgg
     2461 tggccacgtt ccgctcaatc aggtggcgat ggtagcggca cctgagcccc ggctgctgac
     2521 ggtacagccc ttcgacaagt ctctcgccca ggcgatcgag aaggctatcc gcgattcgga
     2581 cctgggcctc aatcctgcga cccagggaaa cctcatccgg gtgccgctgc cggccctctc
     2641 ggaggagcgg cgcaaagacc tggtcaaggt ggtacacaag ctgggcgagg aaggccgtat
     2701 tgcggtgagg cacgcgcgga ccgagacgct ctccaaggtc aagaagctgg agaagatctc
     2761 ggaggacgac aagcgacacg ccgagaagga agtgcagaag ctcaccgacg agcacatcaa
     2821 acagatcgaa gcgctcatcc acgcgaaaga agcggaaatc ctggaagtct gagcggatga
     2881 gcaacgagct gcttcggcgc gttcgagtcc atggggcggt acccgcccac atcgcgatca
     2941 tcatggatgg gaatgggcgg tgggccaagg gtcgctcact tccccggcca ttggggcacc
     3001 acgccgggat gaaagcggtg cgggaggtgg tggaaggctg cctcgaggcc ggagtcggcg
     3061 tgctgacact gtttgcgttc agccaggaga actggcagcg cccggccggt gagatcgagg
     3121 cgctgatgaa gctgctcgag gagtacattg ccagggaagc gaacgagctg cgaggccagg
     3181 gggtgtcggt ccggatcctg ggtcacctgg agcggctggg gccgggcgct cgccgcgccg
     3241 tcgagcggat catggctgaa acggccggcg gccaggcgct ggctctcaac ctgtgcatct
     3301 cctacagcgc acgggcggag attgcccggg ccgcaaggct cctggccgag tcggccgcgg
     3361 ccgggctgct ggacccgtcg aacatcgatg aagacgcggt cggacggatg ctctacaccg
     3421 cggagtggcc cgatcccgat ctcctgatcc gcacctccgg cgagatgcgc atctccaact
     3481 tcctgttgtg gcagctcgcc tacgcagagc tctacgtcac tccagtgctg tggccggact
     3541 ttacccgtcg gcatctgttc gaggcaatcc tggagtttca gcggcgcgaa cgccggttcg
     3601 gacgcgtcga agccggatga gcatggattc aaatctggtc cggcgggtcg ggttcgcggt
     3661 cattgcgatt cccttcgtgc ttgcggtggt gtggtatgga ggcgtgccgt ttgtgctcgt
     3721 gcttgtggct gccggcgcag tcggggcccg cgagctgttc gatctggctg cgcgacaggg
     3781 cattcgcgcg attcgctcgt tcgggctggc cagcgccgcc gcgctcgccc cgatcaccta
     3841 cgccgccgtg gtcgcagccg atgttcgcgc caccgtgtcc gcggcatggc cctatgtcac
     3901 ggcgctctgg ctcatcgtct tgctgaccct ggtcctggcg agcaggaacc cggcggacaa
     3961 gccgctgtcg gccgccgccg tcacgctcct ggcggtcgtc tataccagcg cgctgccggc
     4021 gttcctcatc gccatccggc acaaccgcta tcccgagcga tcctgggcgg gcgcgtggtt
     4081 ggtgttcttc cccttggtgg tgacgtgggt gtgtgacacc gcagcgatgt tcggcgggcg
     4141 tggctttggc ggaccgaagc tcgcgccgac cgtgagcccg ggaaagacct ggtcgggcag
     4201 tacagccggg ttggtgggag ggaccctcat ggctccctta ttcggcgctg tcatcctgcc
     4261 tcgggtggga gtccaggtgc cgctctggca actggtggtt atcgcggggg tcttgtccgt
     4321 catcggtcaa atcggcgatc tggccgagtc gctattcaag cgtgaagctg gagtgaagga
     4381 ttcgagccat ttgatcccgg gtcacggcgg agtgctcgac cgcttcgatt ccctgtactt
     4441 cgtgattccc acggctgcgg cgctgtaccg ctggtttgga gtcatctgat gagcgtggcg
     4501 cagagccaat cccgagccca ggcgtcggct cccagtgaag cggtgccccc agctcggcgg
     4561 ggggtggccc tgctcgggtc caccggctcc atcgggcgca gtaccctcga cgtgctgcgc
     4621 cggcacggcg agcactttcg cctggtggcc ctgactgcgg ggcggaacca gaatgagctg
     4681 gacagccagg tggccgaatg gcgtccgtcc tacgccggtc tcgccggcat cgccggtgac
     4741 gggaggtggc ctacagggcc ggacgtcctg gtggaggccg ccacccaccc ggacgccgac
     4801 atcgtggtga atgcggtggt tggagccgcg gggctcgagg ccacgctcgc agcgctccgg
     4861 gcaggcaagc gggtcgcgct ggccaacaag gagaccctgg tgatggccgg cgacctggtg
     4921 gctcaggcgg catgcgccgg cggcggcgag atcgtgccga tcgattcaga gcacagcgcc
     4981 gtcctccagt gcgtcaccgg ccgggacgat gacagtgtag cgcgcctcat cctgaccgct
     5041 tcgggcgggc ctttccgcga gtggcctgcc gagcgagtct ggcacgccac cgtcgaggaa
     5101 gccctgaggc acccgacctg gcgaatgggc cacaagatca cggtggactg cgccacactt
     5161 gcgaacaagg ccctcgagtt gatcgaggcc cattatctct tccggctgcc ttatgatgcg
     5221 ctggcggtgg tggtccatcc tcagagcgtc gtgcacgcat tcgtggagtt ctgcgacgga
     5281 agcgtgttgt ctcagctcgg ctttcccagc atggagctac cgattctgta cgccctcacg
     5341 cacccggagc ggctccccga tgccggcgtg cggcggtttg atccggtggc cgcagggccg
     5401 ctcaccttcg agccggtccg tacggacgtg tttcgcgctc tcggctgcgg gattgccgcc
     5461 ggtcgggccg gcggaacggc cccagcggtg ttcaacgcgg ccaatgaggt ggcggtggcc
     5521 gcctttctca ggggtgcgat tccgttcggc cggatcagcg agaccatcga acaggtgctc
     5581 gacgcgcata cgccatcagc cgccagctcg gtcgagtccg tccgcgctgc cgacggctgg
     5641 gcccgcgagc aagccgagca gagtgtgagg ccatagtggt gttcacgata ctggcgctca
     5701 tcgtcgtcct cggcgtcctc atctttatcc acgaggcggg ccatttcgtt gccgccaagt
     5761 gggccgggat ctacgtccat cgcttctctc tcggcctggg tccaccgatt ccgtggctga
     5821 ctttccgccg gggcgagacc gagtacacga tctcctggct gccactcggt ggctacgtga
     5881 agatggccag tcgggaagag gatatcggga gcagcgcgct cgagggcggc gcgccgtcgc
     5941 agcccgcgcc accggaccgg gtcttcgagg cgaagccgat ctggaaacgt atggtggtca
     6001 ttctcgccgg cgtcaccatg aacgcgctgt tcgcctgggc cgtcttcgcg tttctcgcct
     6061 ataagaacgg gcgccagatc gatccagtca cgaccgtggg ccgggtggtg gaagagctgg
     6121 ttccgccgga agccgcagcg ctgaaggaga ttcgacccgg cgcgcgcatc atccgggtca
     6181 acggcgactc cgccaagtcg tgggatgacg tggtctcggc catcgccgac acccccgagc
     6241 gggaagtgcg aatcgagctg gacgatgggt ccgtggtagt cctgccgatc catcccgatg
     6301 ccttggagca acggctgaag gcggcgcagg cgcttcagcc gttccgggca ccagtagtgg
     6361 gccaggtact gcccgataag cccgccgcgc gggccgggat tcaggagggc gacaccatcg
     6421 tggcggtgaa cggccgccgg gtggagcagt ggtacgatct actcgagctg ctccaggcca
     6481 gccccgggcg caacctgacg atcgacgttg cacgcggggc gcagcgtttg agcttcaaac
     6541 tcaaggcgta cgtggacacg atcccggggc tcgatggcaa gccgcggcca gtgggacgaa
     6601 ttggggtggc ggtcggcacc gggtcaacct ccgaaaagct caccctgggc caagcgatca
     6661 gcgaaggtgg cagggccacc ctcaaggcat ccacccagat cgttcgaacg gtacggggac
     6721 tcttcagcgg gcgaatctcg ggtcgaacag tcggcggtcc cattctgatc ggccaactgg
     6781 ccggacagag cgcccgactg gggctggata ccttcctcgg cttcatggcg ctgatctcga
     6841 ttaacctggc gatcctgaac ttgctgccgg tgccggtcct cgatgggggg cagttcctct
     6901 tcctgctggc cgaggccatc atccgccgtc cgctgccggt caagctgcgg gaacggctga
     6961 cgacggtcgg tttggtgctg atcgttctcc tgatggggct cgcattctcc aatgacctga
     7021 ggcggatatt tgggggatag ccagacttgc ttcgagtcac cctcctggct tattttcccg
     7081 tgctacaacg gattacgatg cgcgacattg gacagaggat gccagcggca tgagctttga
     7141 caagcagagt gtagtggccc agcaccgggc ccacgacact gatacaggat cgaccaaggt
     7201 gcaggtggcc ctgctcaccg agcggatcaa ctcgctcacc gaccacttcc ggacccactt
     7261 gaaagaccat cacagccgcc gcggtctgct caagatggtc gggacccgcc gtcggttgct
     7321 cacctatctg aagcgaagcg acctggccac ctaccgagcg ctcatcgagc agcttggtct
     7381 ccgccactag gcatcgcatg acagggggcg tcctgatcca tgaatcggga cgccctcgtt
     7441 tattggaggt ctggggtcaa gggtctagag tctacagccg actgagacgc ttgcgcgacc
     7501 tagacctaga ccttggaccc tagac
//
LOCUS       DASYRV010000043         2365 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1047835, whole genome shotgun sequence.
ACCESSION   DASYRV010000043 DASYRV010000000
VERSION     DASYRV010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2365
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1047835"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..615
                     /locus_tag="VGQ24_00955"
     CDS             <1..615
                     /locus_tag="VGQ24_00955"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEV8453424.1"
                     /translation="ERLTMELIRPEAVPLVPHGGVVLTPDSLLAHPRIAARRAALEAA
                     ERTIQVERLGARPDFSITTRYGARPLGADFFSAFVGIRVPLWAGRKQNRLADAARADA
                     DAARAELTEETVALQADLETARAGVASGETRLRLLTTQVIPSAWATVEAVLHSYRVGQ
                     APFLNVLAAEDSLYRAELEAAMVAAEHLTHLVMLEQLLLTEDAQ"
     gene            612..1865
                     /locus_tag="VGQ24_00960"
     CDS             612..1865
                     /locus_tag="VGQ24_00960"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEV8453425.1"
                     /translation="MRPFDTLALALGLAMTACAKQERPDRSSTVAEGKVKVEGMKGME
                     GMAGLGAMEGMESGVPLDRTAADRLGISFARAAVRPLGRETRVVGTLSYAEPRRQYVN
                     ARVMGWVEQLYADYMGKPVRKGDPLLALYSPELVSAQEEYLSARRLGDKSLAAAAQRR
                     LSLWNIPQDQIDSLERTGEARRTIVLRSPMSGEIAEKQVTEGQAVQPGDNLFLIADRR
                     VLWVDLAVFEMDTRLIRIGSPVAITVDALPGKTYEGRVTFIYPTVDEKTRTITARAEV
                     MNRDGALRPGMYATAMIRPATAKALTVPTQAVLPTGTQNLVFVNRGDGRFMPRPVAIG
                     IRGDSLVEIVQGLKPGDEVIASAAYLLDSESNLAAAMQGLMLQMGMGLDMGGMTARPR
                     DSGAGALRADGQEMEGMKMGEEGKR"
     gene            1862..>2365
                     /locus_tag="VGQ24_00965"
     CDS             1862..>2365
                     /locus_tag="VGQ24_00965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018251208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEV8453426.1"
                     /translation="MIARLIAWSISRRGLVAVFALALLIAGSLYVRSMPVDAIPDLSD
                     VQVIVYTDYPGQAPQVVENQVTYPLVTALLGVPNTKVVRGQSMFSSSFVYVIFKEGTD
                     LYWARSRVLERLNSVQSKLPAGAKTELGPDATGVGWVYQYAVVAKNKSLAELRSLQDW
                     EIRFALAK"
BASE COUNT          428 a          715 c          793 g          429 t
ORIGIN      
        1 gagcgcctca ccatggagct cattcgcccc gaggctgtac cactggttcc acatggaggt
       61 gttgtcctca cgcctgactc acttctggcc cacccccgca tagccgcgcg ccgcgccgcc
      121 ctcgaggcgg cggagcgcac aattcaggtt gaacggctgg gggcgcgtcc ggatttcagc
      181 atcaccactc gctatggcgc ccggccactc ggtgccgact tcttttcggc ctttgtgggc
      241 atccgggtgc cgctctgggc cggccggaag caaaatcgcc tggccgatgc tgccagggcg
      301 gatgccgatg ctgcccgggc ggaacttacc gaggaaacgg tcgccttaca ggccgatctc
      361 gaaacagccc gggcgggagt tgcgagcggt gagactcgcc ttcggctcct cacaacccag
      421 gtcatcccgt cggcgtgggc aacggtagag gccgtcctac acagctaccg tgtgggccaa
      481 gctccctttc tcaacgtgct cgcggctgaa gactcgctct atcgggccga attggaagcc
      541 gccatggtgg cggcggagca cctcacccac ctggtgatgc tcgagcaact tctgctcacg
      601 gaggatgcgc aatgaggccg ttcgacaccc tcgcgctggc cctgggcctg gctatgacgg
      661 cctgcgcaaa acaggaacga cctgatcggt ccagcaccgt ggccgaaggc aaggtgaagg
      721 tggaaggaat gaagggtatg gaagggatgg cggggctggg agcaatggag gggatggaga
      781 gtggcgtccc actcgaccgc accgcggccg accgactcgg gatttccttc gctcgagccg
      841 cggttcgtcc gctcggccgc gagacacgtg tagtgggaac gctcagctac gcggagccgc
      901 gccggcagta cgtcaatgcc cgggtcatgg gctgggtgga gcagctgtac gccgactata
      961 tgggcaagcc ggtgcggaag ggcgatccgc tcctggcact ctactcgccc gagctggtca
     1021 gcgcgcagga ggagtaccta tcggcccgcc ggcttgggga taagtctctc gctgcggcgg
     1081 ctcagcgccg cctcagttta tggaacattc cgcaggacca gatcgatagc ctggaacgta
     1141 ccggggaagc ccgccgtacc atcgtgcttc gatcgccgat gagcggagaa atcgccgaga
     1201 aacaggtgac ggagggacag gccgtccagc cgggcgataa cctgtttctg atcgccgacc
     1261 ggagggtgct ctgggtcgat ctcgccgtgt tcgaaatgga cacccgtcta atacggatcg
     1321 gctcgccggt ggcaatcacc gttgacgcgc tacccgggaa gacctatgag ggtcgagtga
     1381 cgtttattta tccgaccgtc gacgagaaga ctcgcaccat tactgctcga gccgaagtaa
     1441 tgaataggga tggcgccttg cgaccaggga tgtacgcgac tgcgatgatt cggcccgcga
     1501 cggcaaaggc gctgacggtg cccacccagg cggttcttcc gaccggcacc cagaatctgg
     1561 tgttcgtcaa tcggggtgat gggcggttca tgccacgtcc cgtagcgatc ggaatcaggg
     1621 gtgattccct ggtcgaaatc gtccagggtc tcaagcccgg ggacgaagtg attgcgtctg
     1681 ccgcgtatct gctggattcg gaatccaacc tggcggccgc gatgcagggc ctgatgctcc
     1741 agatggggat gggactcgac atgggcggga tgacagcgag gccgcgggac agcggggcgg
     1801 gtgccctcag ggcggatggg caggagatgg aggggatgaa gatgggtgag gagggcaagc
     1861 gatgattgcc cgactgatcg cctggtctat ctcgcggcgg ggactagtgg ccgtatttgc
     1921 gctggcatta ctgattgccg gcagtctcta tgtccgctcg atgccggtag acgccatccc
     1981 tgatctgtcg gacgtgcagg tcatcgtcta tacggattac ccgggccagg ccccacaagt
     2041 cgtcgagaac caggtgacgt accctctcgt caccgcgctc cttggcgtgc ccaacacgaa
     2101 ggtggtgcgt ggccagtcga tgttcagtag cagcttcgtc tacgtgatct ttaaggaggg
     2161 cacggacctc tactgggccc ggtctcgtgt gctcgagcgc ctcaactccg tccaatcgaa
     2221 gcttccggct ggagccaaga ccgagctcgg tccggacgcc accggcgtcg gctgggtcta
     2281 ccaatatgcc gtcgttgcca agaacaagtc tctcgccgag ctgcgctcgc tgcaggactg
     2341 ggagatccgc ttcgcgctgg ccaag
//
LOCUS       DASYRV010000044         3253 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1680484, whole genome shotgun sequence.
ACCESSION   DASYRV010000044 DASYRV010000000
VERSION     DASYRV010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3253
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1680484"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..766)
                     /locus_tag="VGQ24_00970"
     CDS             complement(<1..766)
                     /locus_tag="VGQ24_00970"
                     /inference="COORDINATES: protein motif:HMM:NF012361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEV8453427.1"
                     /translation="MTEPLAPQYNPSSIESELYRWWTEHGLFSPDSHAPGSGQPYVIM
                     MPPPNVTAVLHMGHGLNNTVQDVLIRFERMRGRRALWLPGTDHAGIATQNVVERELAQ
                     EGLTRFDLGRDAFVERVWAHVRETGAAILEQLKAIGSSADWSRTYFTLDEGLSRAVRE
                     TFVRLYEEGLVYRGHYIINWCPRCLTALSNEEVEKEELDGHLWHLRYPLADGSGQVTV
                     ATTRPETMLGDTAVAVHPDDERYRGLIGRVIRLPLVD"
     gene            complement(763..1197)
                     /locus_tag="VGQ24_00975"
     CDS             complement(763..1197)
                     /locus_tag="VGQ24_00975"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HEV8453428.1"
                     /translation="MRRDEELSDAQVVLWTTFGVGTGLLAGFALSEWMGGVTGPRMQR
                     AARRLGQAAPVRQTPAASARAVDAALHAEPRLAKFVIEVVAVSRGTVELRGWVTDRAA
                     RTLAARVATAVTGIDTVINSILVRGEDDRIIPDGKRVTDQSA"
     gene            1290..1442
                     /locus_tag="VGQ24_00980"
     CDS             1290..1442
                     /locus_tag="VGQ24_00980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453429.1"
                     /translation="MENDQVTLAGSGLVRWMVVAALVIAGIGLFLYFAPSTKPVVPPS
                     VEESPR"
     gene            1439..>3253
                     /gene="thrS"
                     /locus_tag="VGQ24_00985"
     CDS             1439..>3253
                     /gene="thrS"
                     /locus_tag="VGQ24_00985"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEV8453430.1"
                     /translation="MTTVRLTLPDGSQREAPAGTTPRQIAEGIGPGLARAALAARVNG
                     EVWDLDRPIESDASLAILTEKDPEALQLLRHSSAHILATAVRELFPNAGIGFGPPIED
                     GFYYDFQVDRPFTPEDLQRLEAKMAEVASRDFPFVREVVDRAEARRRFADDPLKLERI
                     AELGDDETITVYTDGPFVDLCRGPHIPRTGRLKHFKLLHAAGAYWRGDEKRQMLQRIY
                     GTAWFKKEDLDAYLHRLEESRRRDHRVLGKQLDLFSIQEIVGPGLVFWHPKGAMIKWL
                     LTRAVEDDNVRSGYDLVYTPNITREELFKISGHLPLYEANQYPPMAAGHEEAEDVRYR
                     VKPMNCPMHALIYKSVQRSYRDLPVRLSEVANVYRNERSGVLHGLLRVRGLSMDDAHI
                     FCTPDQVEDEIFLCLSQVDRLVRETFGFELDFEVSTRPTERLGGDAIWDRAEATLKRA
                     LDRKGIPYRVEEGGGAFYGPKIDIKFRDAIGRLWQGPTIQLDFNLPDRFELEYIGPDN
                     KPHRPAMIHRAIYGTLERFIGNLIEHFAGAFPVWLAPEQVRVIPISDAQADVARRLAG
                     RLKAAGHRVHVDDRGETLNYRIREGELQKVPYMAVVGQR"
BASE COUNT          569 a         1059 c         1041 g          584 t
ORIGIN      
        1 ggtcgaccag aggaaggcgg atgacgcggc cgatcagtcc gcgataccgt tcgtcgtcgg
       61 gatggaccgc caccgctgta tcccccaaca tcgtctccgg ccgggtcgtc gcgactgtca
      121 cctgtccgct gccgtcagcc aggggatacc ggaggtgcca gaggtggccg tccagctcct
      181 ccttctccac ttcctcattg gagagggcgg tcaggcagcg ggggcaccag ttgatgatgt
      241 agtggccgcg gtagaccaac ccttcctcat agagacgaac gaatgtctcc cgcactgccc
      301 gggagagtcc ctcatcgagg gtgaagtagg tgcgggacca gtcggccgag ctgccaatcg
      361 ccttcaactg ctcgagaatg gcggcccccg tctcgcgtac gtgggcccat acccgttcga
      421 cgaatgcgtc ccgtcccagg tcgaagcggg tgaggccctc ctgggccagc tcgcgctcga
      481 ccacgttctg ggtggcgatg ccggcgtgat ccgtgccggg cagccacagc gcccggcgcc
      541 cccgcatgcg ctcgaagcgg atcagtacgt cctgcaccgt attgttgagg ccgtgcccca
      601 tgtgcagaac cgccgtcaca ttgggcggcg gcatcatgat cacgtacggc tggcctgatc
      661 cgggtgcgtg gctgtcggga gagaagagtc cgtgctcagt ccaccaccgg tacaactcgg
      721 actcgatcga tgatggattg tattgcggag cgagcggctc ggtcatgcgc tctggtcggt
      781 gacccgctta ccgtctggaa tgatccggtc gtcctcaccg cgcacgagaa tactgttgat
      841 gacggtatcg atccccgtca cggcggtggc tacccgggcg gccagggtgc gcgccgcgcg
      901 atcggtgacc cagccgcgga gttcgaccgt cccgcggctc accgccacca cctcgataac
      961 gaacttggcc aggcgcggct ccgcatggag cgccgcgtcg acggcgcgcg cggatgcagc
     1021 tggagtctgg cgcaccggcg cggcttgtcc cagccggcgt gcagcccgtt gcatccgggg
     1081 tccggtcact ccacccatcc actcgctcag ggcaaagccg gccaacagtc ctgtccccac
     1141 gccgaaggtg gtccacagga caacctgggc gtcgcttagt tcttcgtctc gtcgcacgcg
     1201 cagtcctctt acagaagaaa acctactctg attaagttaa cctttttccc gtatgaacac
     1261 aggcatattt cccactcggg gaatcaatca tggagaatga tcaggtgacg ctcgccgggt
     1321 ccgggctggt acgctggatg gtggttgcag cgctcgtgat cgccggcatc gggctctttc
     1381 tttacttcgc cccgtcaacc aagcctgtgg tcccgccatc ggtggaagaa tcgcctcggt
     1441 gaccacggtc cgcctgaccc tccccgacgg gagccagcgt gaggcacccg ccggcacgac
     1501 cccccggcag atcgccgagg ggatcggacc gggcctggct cgggccgcgc tggcggcgcg
     1561 ggtcaacggc gaggtctggg acctggaccg ccccatcgag tcggacgcgt cgctggccat
     1621 cctgacggag aaggatcctg aagcgctcca gctgctgcga cactcctcgg cgcacatcct
     1681 ggccaccgcg gtgcgcgagc tctttcccaa cgccggaatc ggcttcggcc cgccgataga
     1741 ggacggtttc tactacgact ttcaggtgga ccgtccgttc acccccgagg accttcagcg
     1801 cctcgaagcc aagatggccg aggtggcgtc gcgagacttt ccatttgtgc gggaggtggt
     1861 ggatcgggcg gaggcgcggc gtcgctttgc cgacgatcct ctcaaactgg agcggatagc
     1921 cgagctgggc gatgacgaga cgatcacggt gtataccgat ggccccttcg tggatctctg
     1981 ccggggaccc cacatacccc gcactgggcg gctcaagcat ttcaaactgc tgcacgccgc
     2041 cggcgcctat tggcgaggtg acgaaaagcg gcagatgctg cagcgcatct atggcacggc
     2101 ctggttcaag aaagaggacc tggacgccta tctccatcgg ctggaggagt cccgccgccg
     2161 cgaccaccgg gtgctcggca aacagctcga cctcttctcg attcaggaga ttgtgggtcc
     2221 cggattggtc ttctggcacc ccaagggcgc catgatcaag tggttgctga cccgagcagt
     2281 cgaggacgac aacgtccgaa gcggctacga tctggtctac accccgaaca tcacccgtga
     2341 ggagctgttc aagatctcgg gccaccttcc tttatatgag gccaaccagt accccccgat
     2401 ggccgcgggc cacgaggagg ccgaggacgt tcgttatcgg gtaaagccga tgaattgccc
     2461 gatgcacgcc ctgatctaca agagtgtgca gcgcagctat cgcgaccttc cagtacgcct
     2521 gtcggaagtg gccaacgtct accgcaacga gcgctcgggc gtgctgcacg ggctcctccg
     2581 ggtacggggg ctctcgatgg acgatgccca catcttctgc acgcccgacc aggtcgaaga
     2641 cgaaatcttt ctttgcctga gccaggtgga ccggctggtg cgggagacgt tcggcttcga
     2701 gctcgacttc gaggtctcga cccggcccac cgagcgactg gggggcgatg caatctggga
     2761 tcgtgccgaa gcgacgctca agcgtgcgct cgatcggaag ggaattccct accgcgtcga
     2821 ggagggtggc ggtgccttct atggtccgaa aatcgacatc aagttcaggg atgcgatcgg
     2881 ccggctctgg cagggcccca ccattcagct cgacttcaat ctgccagacc gattcgagct
     2941 ggaatacatc ggtcccgaca ataagccgca tcgccctgcg atgattcacc gagcgatcta
     3001 tggtacgctg gagcggttca tcgggaattt gatcgagcac ttcgccgggg cgttccccgt
     3061 ctggctcgct cccgaacagg tgcgggtaat cccgatctcc gatgcccagg ccgacgtcgc
     3121 ccgccggctg gccgggcgtc tcaaggcggc cgggcacagg gtgcacgtgg atgaccgggg
     3181 cgagaccctc aattaccgca tccgtgaggg cgagctgcag aaggttccct acatggcggt
     3241 ggtcggccag cgc
//
LOCUS       DASYRV010000045         5977 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2917087, whole genome shotgun sequence.
ACCESSION   DASYRV010000045 DASYRV010000000
VERSION     DASYRV010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5977
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2917087"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..687)
                     /locus_tag="VGQ24_00990"
     CDS             complement(<1..687)
                     /locus_tag="VGQ24_00990"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEV8453431.1"
                     /translation="MLPERDAWGERLPRHLGLWSAVAVLIGSTIGSGIFRVPASVAER
                     LQYPGPVFLAWVIGGLVALFGALTLAELAGALPRSGGVFAYILESFGPLPAFLFGWSE
                     LTVIRASALGAIATIFAEYLGYFVRLTPMQVRWVAAVAVVAVGLLNYVGVNRAAVIMN
                     LTTVAKYAALAALVLLAFTVGEGNASHFTPAWGASVNVSLIATALIAIMWTYDGWADL
                     SFIGGEVKNPG"
     gene            871..2787
                     /locus_tag="VGQ24_00995"
     CDS             871..2787
                     /locus_tag="VGQ24_00995"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: protein motif:HMM:NF003349.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0048034 - heme O biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HEV8453432.1"
                     /translation="MNASQPDHTRLLRRLAWTGAALAFGLIVLGGVVRITGSGMGCGD
                     HWPRCHGEWFPPLDLPTMIEIGHRWAAALVSAVVLAIAAVAWIRHRSEPHLRNPATLA
                     LALLVAQVLLGAVTVKLALPPWVVITHLANAMVLLAVLLVTALRAGTGARLALRLSKG
                     GAPLPRHRRHGLVLGTAALGYVVILVGANVANLHAGLLCLGFPLCNGALLPPAAPLAS
                     LPWAHRMLAFGFLGLVLALLIRLGSGRSADERRLSRYVAVVLGITLTQIGVGAAMVLG
                     LLPPGLRAAHLLVGTLLWAALVLMAFHSARTLMPATDPGEVQLRGQSLLGDLIALTKP
                     RIISLLLVTTVAPMFITPAGLPSPSLVFWVTLGGYLMAGGANAINMWFDRDIDQKMTR
                     TRLRPIPAGRIRPLAGLAFGIGLGVVAFAIFWYRVNPLSGWLALGGLLFYVFVYTIWL
                     KRSSPQNIVIGGAAGAFPPLVGWTAVTGQLDLAAIYLFAIIFYWTPPHFWALALIKQG
                     EYAKAGVPMLPVVRGERRTKFEMLAYTLILLPLTLMPAFFGALGVFYAVAAALLGTRL
                     LWYCIQLRRERSITPTAWRMYRYSLLYLALLFVAMGIDRALPFGHSVVPAPVLILDQP
                     EQERAIPAGGHYGH"
     gene            2813..4633
                     /locus_tag="VGQ24_01000"
     CDS             2813..4633
                     /locus_tag="VGQ24_01000"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HEV8453433.1"
                     /translation="MTTDAGPRKRRLPPPGRLVRLWPRVRQFRGMLALATLTLVASAM
                     IGLAFPMVVRYLLDAAFIDRNRVILDRIAVGLVVLFTVQAALNYAQTYLLSAVGERVV
                     AGLRRELFTKLLEMPPGFFAERRTGELTSRLTTDIGLLQGVLSHQIAEFSRQMLALVG
                     GIALLTLMQPKLTLTALAVVPLVVGSALYFGRRLRRMTVSVQDRVADATAVAEEAFSQ
                     IRTVQSFVQEPAERQRYGERIGESVRAALVRAKIRGVFFGVLTFSTFVGIVFVLWQGG
                     LQVLEGRLTPGELVQFLLYTITIAAAIGALASFFSSYQEAVGAAERVFEILEMRPAIA
                     DPDSPVPLPSPARGSVAFEGVYFRYQRDPSLPWILEDINLTCEPGEVVALVGPSGGGK
                     TTLVSLLPRFWDVDRGRVLLDDTDIRHLRLADLRSAIGIVPQDPALFSGTIRDNIAYA
                     RPGASAADVEAAARGAHAHEFIEGFPQGYDTLVGERGVKLSGGQRQRVAIARAILKDP
                     AVLILDEATSNLDNESERLIEDALGKLLVGRTTLIIAHRLSTVRRADRLIVLDHGRIV
                     EEGTHTELLELRGLYARLYQRQFRDPVETDAPLSLGGAEL"
     gene            complement(4692..5768)
                     /locus_tag="VGQ24_01005"
     CDS             complement(4692..5768)
                     /locus_tag="VGQ24_01005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453434.1"
                     /translation="MKRSMCGIALLAAATALWSCNGDPTGSIRDSGQKVLAEPTSVFV
                     DQGATEFVTVELVDGQGNQLEVDFAPQNVGAGITVVEDSTFLQTSTGHIQTSQRFIVG
                     GVAPGATSFELASGGTTLTIPVRVIPTSFAATFSNATLAANEPVTITLPAGYKFVAGA
                     GVSSTLGAGIVTSVAADSSSLVALLPLGSSGQLTLDSVQADFLAGVTLGGLPTDATIT
                     VDATPAAGTGSTATAPSLPVPALDATTGFFDIGTFTAADVTGDGGVGAQYYRLDITEA
                     GDYTVTTDWPATSTSDIDALLCPSSGCAGSLDFLGSGLDHPESGTRTLAPGTYFVAVV
                     LFAGGPTDFGIRIDHVATPPPPAP"
BASE COUNT          978 a         1955 c         1961 g         1083 t
ORIGIN      
        1 cccgggattc ttgacctcgc ccccgatgaa ggagagatcg gcccagccgt cataggtcca
       61 catgatggcg atgagggcgg ttgcaatcag ggagacgttg acgctggctc cccaggccgg
      121 cgtaaagtgc gacgcgttcc cctcgcccac ggtaaacgcc agcagcacca gggctgcgag
      181 agcggcgtac ttggcgacgg tggtcagatt catgatgaca gccgcccggt tgacgccgac
      241 atagttcagc aacccgacgg caaccaccgc cacggctgcc acccaacgca cctgcatcgg
      301 ggtcaaccgg acgaaatatc ccaggtattc ggcgaaaatc gtggcgatgg cgcccagggc
      361 ggacgcccgg atgaccgtga gctcggacca gccgaacaga aaggccggca acggaccgaa
      421 ggactcgagg atgtaggcaa agactccgcc cgagcggggc agcgcaccgg cgagctccgc
      481 cagggtcagt gccccgaaga gcgccaccag tccaccgatg acccaggcca ggaacaccgg
      541 tcccgggtac tggagacgct cggcgacgct ggctggaacg cggaagattc cgctcccaat
      601 ggtggagccg atgagcacgg ccaccgcact ccaaagccca aggtgccggg gaagccgctc
      661 accccacgcg tcgcgttccg ggagcatgtt attggctatt ggctattggc tattggctat
      721 tggctattgg ctattggcca atcaacaggg cggaaaagaa cggggccagc gagagccttg
      781 tcaaggatgt attttgcgac acgtctattg ctacgttgcg tgattgaggc gttgccaata
      841 gcccacggcc aatagccaat agcccactaa atgaacgcct cgcaaccaga ccacacccgg
      901 ctgcttcgcc gcctcgcctg gaccggagca gccctggcct ttggcctcat cgtcctcggc
      961 ggggtggttc ggatcaccgg ctccggcatg gggtgtggcg accactggcc tcgctgccat
     1021 ggtgagtggt tcccgccgct tgacctccct accatgatcg agatcggcca tcggtgggct
     1081 gcggccctgg tgagcgcggt ggtgctggcg atcgcagccg tcgcgtggat ccgtcatcgg
     1141 tccgaaccgc atctgagaaa cccggcgaca ctggccctgg cgctgctggt ggctcaggtg
     1201 ctgctcggcg ccgtcacggt caagctcgcg ctgccgccgt gggtcgtgat cacccacctg
     1261 gcgaatgcga tggtgctgtt agcggtgctg ctggtaacgg cgttgcgtgc ggggacgggc
     1321 gcacggcttg ccctgagact gtcgaagggc ggtgcgcccc taccgcgaca ccgccgtcat
     1381 ggcctcgtat tgggaacggc cgcgctcggc tatgtggtca tcctggtcgg ggctaacgtc
     1441 gccaacctcc acgccggtct cctgtgcctg ggcttcccac tttgcaacgg tgcgctgctc
     1501 ccgcctgccg cacccttagc ctcgctgccg tgggcccatc gcatgctcgc gttcggattt
     1561 ctgggtctgg ttctggctct gctcatccgg ttggggtctg gccgcagcgc ggatgaacgg
     1621 cggctcagcc gttacgtcgc cgtcgttctg gggatcaccc tgactcagat cggggtgggt
     1681 gcagccatgg tgctcggcct cctgccgccg gggttgaggg ccgcccacct gttggtcggt
     1741 accctgctct gggccgcgct ggtgctgatg gcctttcact ccgcccgcac gctcatgccg
     1801 gcgaccgacc ccggcgaagt ccagctgcgc ggtcaatctc tgttgggcga tctgatcgcc
     1861 ctcaccaagc cccggatcat ctcactgctg ctggtgacca cggtggcgcc gatgttcatc
     1921 acaccggccg ggcttccatc tccatcgctc gtcttctggg tcaccctggg tggctacttg
     1981 atggccggtg gcgccaacgc catcaacatg tggttcgacc gggacatcga tcaaaagatg
     2041 acccggaccc ggcttcgccc catcccggcc ggaaggatca ggccgttggc cggcctggcc
     2101 ttcggcatcg gcctcggtgt cgtggccttt gccatcttct ggtaccgcgt caacccgctc
     2161 agtggctggc tcgcactcgg gggacttctc ttctacgtct tcgtctatac catatggctc
     2221 aaacggtcga gcccccagaa catcgtcatc ggaggggcgg ccggcgcgtt cccgccgctg
     2281 gtgggctgga ccgcggtgac cgggcagctg gacctggccg cgatttatct cttcgccatc
     2341 atcttctatt ggacgccccc gcacttctgg gccctcgcgc tgatcaagca gggggagtat
     2401 gccaaggccg gcgtaccgat gttgccggtg gtgcggggcg agcggcgcac caagttcgaa
     2461 atgctggcat acaccctgat cctgctgccg ctcacgttga tgcccgcatt cttcggtgcg
     2521 ctaggcgtat tctacgcagt cgcagcggcg ctgctcggca cgcggctgct ctggtactgt
     2581 atccagctcc ggagagagcg gtccatcacc ccgaccgcct ggcgcatgta ccgttactcg
     2641 ctgctgtatc tggctctcct cttcgtggcg atgggcatcg atcgagcgct cccgttcggc
     2701 cacagcgtgg tgccggctcc ggtgctcatc ctggaccaac ccgagcagga gcgggcgatc
     2761 cccgcgggcg gccactacgg ccactgactc tcccacaaag catccctggg cgatgacgac
     2821 tgacgcgggc ccccggaaac gccggctccc gccaccgggc cgtctggtcc gtctatggcc
     2881 tcgggtgcgc caattccggg gcatgctggc actggctaca ctgacgctgg tggccagcgc
     2941 catgataggt ctggcattcc cgatggtcgt gcgctatctg ctcgacgccg cgttcatcga
     3001 ccggaaccgc gtcatcctgg atcgaatcgc ggttgggctc gtggtgctgt tcaccgttca
     3061 ggcggcgctg aactacgcgc agacctatct tctgagcgcc gtcggtgagc gggtcgttgc
     3121 cgggctcagg cgtgagctgt ttaccaagct gctggagatg ccccccggct tcttcgcgga
     3181 gcgacgcacc ggcgagctca ccagccggct cacgaccgac atcgggctgc tccagggcgt
     3241 gctcagccac cagatcgccg agttctcccg ccagatgctg gcgctggtgg gtggtatcgc
     3301 gctgctcacc ctcatgcagc cgaagctgac cctcaccgcg ctggccgtgg tgccgctggt
     3361 ggttgggtcg gcgctgtatt tcgggcgccg gctccggcgc atgaccgtca gcgtacagga
     3421 tagagtggca gacgccactg ccgtcgcgga ggaggcgttc agccagattc gaacggtcca
     3481 gagcttcgtt caggaaccgg ccgagcggca acggtacggc gagcggatcg gtgaaagcgt
     3541 gcgggcggcg ctggtgcggg cgaagatccg gggcgtgttc tttggcgtgc tgaccttctc
     3601 caccttcgtt ggcatcgtgt tcgtgctctg gcagggtggg ctccaggtgc tggaggggcg
     3661 cttgacgccc ggcgagctgg tgcaatttct cctgtatacc atcaccatcg cggcggccat
     3721 cggcgcgctc gcctcgttct tcagcagcta tcaggaggcg gtcggagcag ccgagcgggt
     3781 tttcgagatt ctggagatga ggccggcgat cgcggacccg gactcgccgg tgccgctgcc
     3841 ctcgcccgcg cggggaagcg tggctttcga gggggtgtac ttccgatacc agcgcgatcc
     3901 ctcgctgccg tggatcctgg aagacatcaa tctcacctgc gagccgggtg aggtcgtggc
     3961 gctggtgggc ccgtccggcg ggggcaagac caccctggtg tcgctgcttc cccgcttttg
     4021 ggatgtggac cgtggccgcg tgctgctcga cgacaccgat atccgccatc tcaggctggc
     4081 ggatctcagg agcgcgatcg gcatcgtccc ccaggacccc gcgctcttca gcggcacgat
     4141 ccgggacaac attgcgtatg cccggcccgg agcatccgcg gccgatgtgg aagccgccgc
     4201 gcgaggggcc cacgcccatg aattcatcga ggggtttcct caggggtacg acaccctggt
     4261 cggcgagcgg ggggtcaagc tctccggagg ccagcgccag cgggtggcga tcgcgagagc
     4321 catcctgaag gatcctgccg ttctcatcct cgacgaagcc accagcaacc tggataacga
     4381 gagcgagcgg ctgatcgagg atgcgctggg caagctgctt gtgggccgga cgacgctgat
     4441 tatcgcgcac cgcctcagca cggtacgccg ggcggaccgg ctgatcgtgc tggaccacgg
     4501 gcgcattgtc gaggagggaa cccacaccga gctgctcgag ctgcgggggc tgtacgcccg
     4561 actgtatcag cggcagttcc gggatccggt ggagactgac gcaccgctca gtctgggcgg
     4621 cgccgagtta tgaggaaagc cccacgtttt tagacgcggg gctctttgat cctagtacca
     4681 atgccaagta ctcacggcgc gggcggcggt ggagttgcga cgtggtcgat ccggatcccg
     4741 aagtcggtag gtccacccgc aaagaggacc accgcgacga aatacgttcc tggcgccaga
     4801 gtgcgtgttc ccgactccgg gtgatctaaa ccactgccca ggaagtcaag cgaacccgcg
     4861 caccctgagg acggacataa gagcgcatcg atgtctgaag tcgaagtagc cggccaatcg
     4921 gtcgtgacgg tgtagtcacc agcctcggtt atatcgagcc tgtagtattg tgcacccacg
     4981 ccgccgtccc cggtaacgtc tgcggcggtg aaagtaccta tatcgaagaa cccggttgtc
     5041 gcatccagtg ccggcaccgg cagactcggc gccgtggcgg tgctgcccgt ccccgccgcc
     5101 ggagtggcgt cgacagttat cgtcgcgtcc gtcgggagac cgcccagtgt taccccggca
     5161 aggaagtcgg cctgaacgct atccagcgtg agctggccgc tgcttccgag cggcagtaac
     5221 gcgacgagtg agctgctgtc ggctgcaact gaggtcacga taccagcgcc gagggtgctc
     5281 gagacccccg cgcccgccac gaacttgtac cccgctggta gggtaatcgt caccggttca
     5341 ttcgccgcca gcgtggcgtt ggagaacgta gcggcgaacg aggtcgggat gacccggacc
     5401 gggatcgtca gcgtggtgcc cccgctggcc agctcgaacg aggtggcgcc cggagccaca
     5461 ccacctacga tgaaccgctg tgaggtctga atgtgtccgg tcgaagtctg gagaaacgtg
     5521 ctgtcctcca cgaccgtgat gcccgctccc acgttctggg gggcgaagtc gacctcgagc
     5581 tggttgccct gcccgtccac gagctcgacc gtgacgaact cggtggctcc ctggtccacg
     5641 aagacggaag tgggctccgc aagaaccttc tggccgctat cgcgaatgga ccccgtcgga
     5701 tcgccattgc acgaccagag cgcggtcgcc gcggccagca gggctatgcc acacatcgaa
     5761 cgcttcatac tcggcacctc atcgagtgaa actgtgaaaa ctgcgctcgt aagaccctcg
     5821 agaaatgtcc caactcagaa ccgcctgctt gccgagacga ggtccacgcc gagaaagcgt
     5881 ccggcgtcgg ccacggcagg gccaccgatc agctcagccc agccggggta ccccgactcc
     5941 ttgaggtcgt tggaatggat gagggtgtag gccccaa
//
LOCUS       DASYRV010000046         2834 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1264596, whole genome shotgun sequence.
ACCESSION   DASYRV010000046 DASYRV010000000
VERSION     DASYRV010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2834
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1264596"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..516
                     /locus_tag="VGQ24_01010"
     CDS             <1..516
                     /locus_tag="VGQ24_01010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-TA family PLP-dependent enzyme"
                     /protein_id="HEV8453435.1"
                     /translation="DQAGLPPAVVSGGSTPTVWQTHEINGVTEIRPGTYAYNDRITAQ
                     TGACDWNDCALTVLATVVSTAVAGQAVIDAGSKALGREPAEEGQGYGALLGRPEITVQ
                     RLSEEHGILDLRETDWRPAVGEQVCVVPNHVCIVVHLHEVIHGIRGDRVESSWPVLAR
                     GRRPISPPVEV"
     gene            524..946
                     /locus_tag="VGQ24_01015"
     CDS             524..946
                     /locus_tag="VGQ24_01015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3052 domain-containing protein"
                     /protein_id="HEV8453436.1"
                     /translation="MAAGYSKRSLVEKLGIKPGTQVVALGVSPTYPSLLGTLPPGATL
                     HSRLPRSAAFIHQFARQGDELTTVFPRLARALTDDGTLWVSWPKQSSGADTDLNENLI
                     REIGLAHGLVDVKVCAVDEVWSGLKLVRRVENRARKRK"
     gene            949..2304
                     /locus_tag="VGQ24_01020"
     CDS             949..2304
                     /locus_tag="VGQ24_01020"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEV8453437.1"
                     /translation="MPGSARILVADDQRDVLEALRLLLKNEGYATETVGSPAGVLAAV
                     QGTDFDAVLLDLNYARDTTTGREGLELVSQLRTLDAALPTIVMTAWGSIDKAVEAMRR
                     GARDFIEKPWDNARLLATLRSQVELGRALRHTQRLEGENRVLRPDSAPELIAESMAMQ
                     PVLRLMRQVAPSDANILITGEHGTGKEVVARWIHAGSARAGRPLVAVNLGGLSEGVFE
                     SEMFGHVKGAFTDARADRIGRFEVAEGGTLLLDEVGSLGLRQQAKLLRVLESGELERV
                     GSSRTRKVDARVLSATNADLPAEVAAGRFREDLLFRLNTIEIHLPPLRERREDIAALA
                     QHFLRRYTSRYGKPLVGFEPEAMIALEAHTWPGNVRELDHTIERAALLATGPHVRTAD
                     LGLRPAGPSATLDDMPLDEVERVLIRKTLERHGGNVSQAAKALGLSRSALYRRLQHYG
                     F"
     gene            2294..>2834
                     /locus_tag="VGQ24_01025"
     CDS             2294..>2834
                     /locus_tag="VGQ24_01025"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEV8453438.1"
                     /translation="MASDREGAASHETRVFYTVLGAGAPAVALACWLLWSTAHPLRVK
                     VTGTLVVVGTWLGGAALARDKVARPLQAISNLLAALREGDYSIQARGATPNHALGLAL
                     LEVNALRETLRSQRFRALEATALLRRVMEEIDVAVFAFDVQNQLRLVNRGGERLLGQP
                     SERLLGRTAAALDLADCLAG"
BASE COUNT          480 a          922 c          972 g          460 t
ORIGIN      
        1 gatcaggccg ggctcccgcc ggcagtggtg agcggcggct cgactcccac cgtctggcaa
       61 actcacgaga tcaacggagt gacggagatc cgccctggga cctatgccta taacgaccgc
      121 atcacggccc agactggcgc ctgcgactgg aatgattgcg cgctgacggt gctggcaacc
      181 gtggtgagca ccgcggtggc ggggcaggcg gtgatcgatg cgggcagcaa ggctcttggc
      241 cgcgagccgg ccgaggaggg ccaaggctac ggtgcgctgc tgggccggcc ggagatcaca
      301 gtccaacggc tttccgagga gcacggtatc ctggatctta gggaaaccga ctggcgcccc
      361 gccgtcgggg aacaagtctg cgtggtgccg aaccacgttt gcattgtggt gcacctgcac
      421 gaggtgatcc acggcatccg cggcgatcgg gtggagagca gctggccggt gctggcccga
      481 gggcggcgac cgattagccc tccggtcgag gtctgagccc ctcgtggctg ccggctactc
      541 caagcgctct ctggtcgaga aactcgggat caagccgggc acgcaagtcg tcgcgctggg
      601 tgtatcgccg acctatccat cactgctcgg aaccctgcca cccggcgcga cgcttcactc
      661 ccgcctcccg cgatccgccg cgttcattca ccagttcgcg cgccagggcg acgagctcac
      721 caccgttttc ccgcgactgg cgcgggcgct cacggacgac ggaaccctgt gggtttcctg
      781 gccgaagcag tcctccgggg cggacacaga tctcaacgag aacctcattc gcgaaatcgg
      841 cctcgcccat gggctggtgg atgtaaaggt gtgcgcggtg gatgaggtgt ggtcgggcct
      901 caaattggta cgccgggtgg agaaccgcgc ccgaaagcgg aagtagccgt gcccggcagc
      961 gcgcggattc tcgtggccga cgaccagcgt gacgtgctcg aagcgctgcg actgctgctc
     1021 aagaacgaag gatacgccac cgagacggtc ggatcgccgg caggtgtgct cgcggcggtg
     1081 cagggaaccg acttcgacgc agtgctcctc gacctcaact acgcccgcga caccactacc
     1141 ggacgcgaag gactggagtt ggtctctcaa ctccggactc tcgatgccgc cctgccgacc
     1201 atcgtgatga ccgcctgggg cagcatcgac aaggcggtgg aggcaatgcg tcgcggcgcc
     1261 cgcgacttca tcgagaaacc ctgggataac gcccgcctgc tggccacact tcggagtcag
     1321 gtcgagctcg gtcgggcgct ccgccatact cagcgcctcg agggggagaa ccgcgtattg
     1381 cggcccgaca gcgcgccgga attgatcgcc gagtccatgg caatgcagcc cgttctcagg
     1441 ctcatgcgtc aggtcgcccc atcggacgcc aacatcctga ttaccgggga gcacggcact
     1501 ggtaaggagg tggtggccag gtggatccac gccggctccg cacgtgccgg acggccgcta
     1561 gtggccgtga acctgggcgg cctgtccgag ggtgtcttcg aaagcgagat gttcggccac
     1621 gtgaagggtg ccttcaccga tgcccgggcc gatcgaatcg gccggttcga ggtggccgag
     1681 ggtggcacac tactgctgga tgaggtcggt agcctcggcc tccgtcagca ggccaagctt
     1741 ctcagggttc tggagagcgg cgagctggaa cgggtggggt cgtcccgcac ccgcaaggtt
     1801 gacgcccgag tgctgtccgc caccaatgcc gacctgccgg ctgaggtggc ggccggacgc
     1861 tttcgtgaag acctgctctt ccgtctgaac acgatcgaga tccacctgcc tcctctgcgg
     1921 gagcggaggg aagacatcgc ggcgctcgct caacacttcc ttcgccgcta cactagccgc
     1981 tacggcaagc cgctggttgg cttcgagccc gaagcgatga tcgctctgga ggctcatacc
     2041 tggccgggca acgtgcgaga gctagaccac accatcgagc gtgcagctct gctggccacc
     2101 ggccctcacg tgcgaaccgc agacctcggg ctccgcccgg cgggcccctc cgccacgctg
     2161 gacgacatgc cgctggacga ggtcgaacga gtgctgatcc gcaaaaccct ggagcgtcac
     2221 ggcgggaatg tcagccaggc cgccaaggcg ctgggactga gccgcagcgc tctctaccgt
     2281 cggctgcaac actatggctt ctgatcgcga gggggctgcg agccacgaga cgcgggtctt
     2341 ttatactgtg ctgggagcgg gcgcgcccgc tgtggcgctc gcttgctggc tgctgtggag
     2401 cacggcgcat ccactccgag tgaaggtgac cggtaccctg gtcgtcgttg gcacgtggct
     2461 cggaggagcc gcactcgcgc gtgacaaggt cgcccgcccg ctgcaggcga tctcgaatct
     2521 cctcgcggcg ctacgggaag gggactactc gattcaggcc aggggagcca caccaaacca
     2581 cgcgctcgga ctggccctgc tcgaggtgaa tgcgctgcgg gaaacgcttc gaagccagcg
     2641 gttccgggcg ctcgaagcca ccgcgctcct gaggcgggtc atggaggaga tcgacgtggc
     2701 cgtgtttgcc ttcgacgtcc agaaccagct tcggctggtg aatcgcggcg gcgagcgcct
     2761 gcttggacaa ccatcggagc ggttgctggg acgcaccgct gcggcgctcg atctggccga
     2821 ctgcctggct ggag
//
LOCUS       DASYRV010000047         1679 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2096575, whole genome shotgun sequence.
ACCESSION   DASYRV010000047 DASYRV010000000
VERSION     DASYRV010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1679
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2096575"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1679)
                     /locus_tag="VGQ24_01030"
     CDS             complement(<1..>1679)
                     /locus_tag="VGQ24_01030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEV8453439.1"
                     /translation="AVRGSHRVTDQAPEEKYQALERFTRNLTAQARLGKLDPVIGRDE
                     EVRRVMQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPESLRDKEIVGLDIG
                     LLLAGAKYRGEFEERLKAVVKELTAAEGRYIVFIDELHTIVGAGAAEGAVDASNMLKP
                     ALARGELHVVGATTLDEYRKHVEKDAALERRFQPVLVGAPSVVDTIAILRGLKERYEV
                     HHGVRITDNALVAAAQLSDRYIGDRFLPDKAIDLVDEAASRLRIEIDSLPQEIDEVER
                     RILQLEIQRQALLKEKDKTGRERLAAVEQEIAGLKEKSGAMKAQWQAEKAAIHTLQTK
                     KAEVEQLKQEVDQASRKGDLQRAAELRYGNIPQLEKAIADEEVRLAEIQQEAKYLKEE
                     VDAEDIAEIVAKWTGIPVAKMLESDRERLTRLEAELGRRVIGQQEAVTAVANAVRRSR
                     AGLQDPNRPTGSFIFLGPTGVGKTETARALAEFLFDDERAMVRLDMSEYMEKHSVARM
                     IGAPPGYIGYDEGGQLTEAVRRRPYSVVLFDEIEKAHPDVFNILLQILEEG"
BASE COUNT          230 a          613 c          519 g          317 t
ORIGIN      
        1 ttcccttcct ccaggatctg gaggaggatg ttgaacacgt ccggatgggc cttctcgatc
       61 tcgtcgaaca gcaccacgct gtacggccgc cgccgcaccg cctcggtgag ctgaccgcct
      121 tcgtcatagc cgatgtagcc gggaggggcc ccgatcatcc gggccaccga atgcttttcc
      181 atgtactcgg acatgtcgag ccgcaccatg gcgcgctcat catcgaagag gaactcggcc
      241 agggcacggg cggtctcggt cttcccgacc ccggtgggcc ccaggaaaat gaacgagccg
      301 gtcgggcggt tgggatcctg cagccccgcc cggctgcgcc gcaccgcatt ggcaaccgcg
      361 gtcacggcct cctgctgccc gatcacccgg cggccgagct cggcctccag gcgggtgagc
      421 cgctcccggt cggactcgag catcttggcc accgggatcc cggtccactt cgccacgatc
      481 tcggcgatgt cttccgcatc gacctcttcc ttcagatact tggcctcctg ctggatctcg
      541 gccagccgga cctcctcgtc cgcgatggcc ttctcgagct ggggaatgtt gccgtagcgc
      601 agctcggcgg cgcgctgcag gtcgcccttg cgcgaggcct gatcgacctc ctgcttgagc
      661 tgctcgacct cggccttctt ggtctggagc gtgtggatcg cggccttctc ggcctgccac
      721 tgcgccttca tggcgccgga cttctccttg aggccggcga tctcctgctc caccgccgcg
      781 agccgctccc gcccggtctt gtccttttcc ttgagcagcg cctggcgctg aatttccagc
      841 tggagaatcc ggcgctcgac ctcgtcgatc tcctggggca gcgagtcgat ctcgatgcgc
      901 agccggctcg cggcctcatc caccaggtcg atcgccttgt cgggaagaaa gcggtcgccg
      961 atgtagcgat ccgacagctg cgccgccgcg accagcgcgt tgtcggtgat gcgcaccccg
     1021 tgatggacct cgtagcgctc cttcagcccg cgcaggatgg cgatggtgtc caccacgctc
     1081 ggcgcgccca ccagcaccgg ctgaaagcgc cgttccaggg cggcgtcttt ttcgacgtgc
     1141 ttgcggtact cgtccagcgt ggtcgccccc accacgtgga gctcaccacg cgccagggcc
     1201 ggcttcagca tgttgctggc atccaccgcc ccttccgccg cgcccgcgcc cacgatggta
     1261 tggagctcgt cgatgaagac gatgtagcgg ccttccgccg cggtcagctc cttcaccacc
     1321 gctttgagcc gctcctcgaa ttccccgcga tacttggcgc cggccagcag cagcccgatg
     1381 tcgagcccca cgatctcctt gtcgcgcagc gattcgggga cgtcaccgtt gacgatgcgc
     1441 tgggccagac cctccacgat ggcggtcttc ccgacgcccg gctcgccgat cagcacggga
     1501 ttgttcttgg tacgacggga aagcacctgc atgactcgcc gtacctcttc gtcccgcccg
     1561 atcaccggat cgagcttccc gagccgggcc tgggcggtga ggttgcgggt gaaccgctcg
     1621 agcgcctggt acttctcctc gggagcctga tccgtgaccc ggtgggagcc gcggacggc
//
LOCUS       DASYRV010000048         2753 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2502921, whole genome shotgun sequence.
ACCESSION   DASYRV010000048 DASYRV010000000
VERSION     DASYRV010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2753
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2502921"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..442
                     /locus_tag="VGQ24_01035"
     CDS             137..442
                     /locus_tag="VGQ24_01035"
                     /inference="COORDINATES: protein motif:HMM:NF018590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1269 domain-containing protein"
                     /protein_id="HEV8453440.1"
                     /translation="MSKTEHLWAVGYVGAAIGAAVGGAGTAMTVASAGIGEDFVKDAQ
                     RLMKPGRSAIFVLDSAGDMDTILRKIRGLGGTVLKTNVDVERARLSQSTPAATPEPP"
     gene            442..1407
                     /locus_tag="VGQ24_01040"
     CDS             442..1407
                     /locus_tag="VGQ24_01040"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HEV8453441.1"
                     /translation="MGSATDVLTQYGLPIIFAWAFAVQAGAPAPALPMLIGAGALSGA
                     GRMDLALAIAAAMAATLAADVLWYWLGRFHGTRVLELLCRLSLDADSLIRHAKERFVA
                     HRLRYLVLAKFLPGVNPLAAGLAGAVPIRLDRFVLCAAAGALLWAGAWMTLGYLCADV
                     IVPMATAAGRLGKPLIFVIAAALVVYLADKFRRRQRFLRHLRKARITPIELKRRLDAG
                     DHPVVFDLRTPLDIETVPYGVPGARWISPEALDEPHQLIHKDSEVVFYCAEPKEATSA
                     HRALLLVRHGYKNVHPLKGGLDGWRQAGFALEPLQPGSQPEVTHQ"
     gene            complement(1671..>2753)
                     /locus_tag="VGQ24_01045"
     CDS             complement(1671..>2753)
                     /locus_tag="VGQ24_01045"
                     /inference="COORDINATES: protein motif:HMM:NF016001.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase/quinone reductase family protein"
                     /protein_id="HEV8453442.1"
                     /translation="FEHGRARFQCEGCAREHLVPFSCKGRAWCPSCGGRRMTERTAHL
                     VDAVLPWVPVRQWVLTVPDRLRHRLAWNHGLCRAVLRVYTRVLLGVYARGAPGGRTGS
                     ITAMQRAGGPLNVNLHFHTLVPGGVFSEAAGGTLAFHPAPGPSDAEGLKNLPFSRQSG
                     QCIHGEPASQPDGRHPSCGQGAPTEARLEEDIMSTCDGEKANRDLEEPGKRPAWVTEH
                     LRRYRDSGGADGHLFEATAAGVPGIVPCLLLTTIGRRSGQKLTSPLFYSTAGAAYIVA
                     GSKGGSDKQPGWYLNLRANPVVEVQVGSEQFTAYARVATGTEREHLWEQMVQITALYN
                     EYQQKTQREIPVVVLEKQPTSQESAS"
BASE COUNT          442 a          937 c          886 g          488 t
ORIGIN      
        1 gagaggtggt tgggatggcg gcaagtttca gcaagaacgc gaaagcgcct cagcgaccag
       61 gcggtcaccc gcccccgggc cggtagaagc cattggccag cttgtataat ggcccacgaa
      121 atggagggat tcgacgatga gcaaaaccga gcacttgtgg gccgtcggat acgtcggcgc
      181 ggccatcggg gcagcggtgg gaggagccgg cacggccatg accgtggcgt cggccggcat
      241 cggcgaggat ttcgtcaagg acgcgcagcg actgatgaaa ccggggagat cggccatctt
      301 cgtgctcgat agcgctggag acatggacac gatcctgcgc aagattcgcg ggctcggggg
      361 cacggtgctg aagaccaacg tggatgtgga gcgggcacgg ttgagccaat ccactccggc
      421 cgcgactccc gagcctccgt gatgggctcg gcaactgatg tcctgacgca gtacggtctt
      481 ccgatcatct tcgcctgggc atttgccgta caggcgggag cgccagcacc ggcccttccg
      541 atgctgattg gagccggtgc cttgtccggc gcgggtcgga tggacctcgc gttagcgatt
      601 gccgcggcta tggccgcgac gctcgccgcc gacgtgctgt ggtactggct cggccgcttc
      661 cacggcaccc gcgtgctcga actgctgtgc cgtctttccc tcgacgcgga ctcgctcatc
      721 cggcacgcca aggagcgatt cgtcgcgcat cggctgcggt atctcgtcct ggcgaagttc
      781 ctgccgggcg tgaatccact cgcggccggc ctcgccggcg ctgttccgat tcggctcgac
      841 cgctttgtcc tctgtgccgc ggccggcgcc ttgctctggg ccggagcctg gatgacgctc
      901 ggctatctct gcgccgacgt catcgttcct atggcaacgg ctgccggccg cctcgggaag
      961 ccgctgatct tcgtcatcgc ggcggcgttg gtcgtctatc tcgccgacaa gtttcggaga
     1021 cggcaacgct tcctgcgtca tctccggaag gctcggataa cgccgatcga gctcaagcgg
     1081 cggttggacg ccggcgatca tccggtggtc ttcgatctga ggacaccgct ggacatcgag
     1141 acggttccgt acggagtccc cggcgcccgt tggatttctc cggaagcgct ggacgagcca
     1201 caccagctga tccacaagga cagcgaggtg gtgttctatt gtgcggagcc caaagaggcg
     1261 acgagcgcgc acagggcgct cctgctggtc cgccacggtt ataagaatgt ccaccctctc
     1321 aagggaggac tcgatggctg gcgccaggct ggattcgccc tcgagccgct gcagcccgga
     1381 tcgcagcctg aagtgaccca tcaatgacct cccaagcctg gacgctccag cagaagtaaa
     1441 ggtgaccagg ctgacaggtt gagtcgggaa ggagaatgtt tcatgagccg accgggatcc
     1501 cgtcgagctg cgccgggccc tgctcgccaa gcatccgcgc catctcgcgg tcctcgacct
     1561 cgtcgtcgag aaggcgggct ggagccagcc gcttcccgcc ggccgggcgc gcggcgtggc
     1621 tcctctgtgc tgcggcaact ctacccctgg tcggtgtgtc tcgctcactc ctacgatgcg
     1681 ctctcctgcg aggtgggctg cttctcgagc accaccaccg gaatctcgcg ctgcgtcttc
     1741 tgctggtact cgttatagag cgcagtgatc tgcaccatct gctcccagag gtgttcgcgc
     1801 tctgtgccgg tcgccacacg ggcgtacgcg gtgaactgct cgctgccgac ttgcacttcg
     1861 accacggggt tggcccgcag gttgagatac cagcccggtt gcttatccga cccgcccttg
     1921 gacccggcga cgatgtacgc tgctcctgcc gtactataaa acaacggcga cgtcagcttc
     1981 tggcccgagc gccgcccgat ggtggtgagc aagaggcagg gcacgatgcc agggacgccg
     2041 gcggccgtcg cctcaaacag atgcccgtcg gctccgccgc tgtcgcgata cctccgcaag
     2101 tgttccgtca cccatgccgg ccgcttgccg ggctcctcca gatcgcggtt cgccttctcg
     2161 ccgtcacatg tactcatgat gtcctcctcc aatcttgcct ctgtgggtgc tccctgccca
     2221 cacgatggat ggcgcccatc gggctgactg gcgggctccc catggatgca ctggccactt
     2281 tgtcttgaga aggggagatt tttcaacccc tcggcgtcgc tcggtcccgg cgccggatga
     2341 aacgccagcg tacccccggc tgcctcactg aacaccccgc ccggcacgag ggtgtgaaaa
     2401 tgcaggttca cgttcaacgg gccgcccgcg cgctgcattg cggtgatgct gccggtgcgg
     2461 ccacccgggg cgccgcgcgc gtacacgccg agcagcacgc gcgtgtacac ccgcagcacc
     2521 gcgcggcaca acccgtgatt ccacgccagt cgatggcgca gccgatccgg gacggtcagc
     2581 acccactggc gcaccggcac ccacggcagc accgcgtcca ccaagtgggc cgtgcgctcc
     2641 gtcatccggc ggccaccgca actcggacac caggcccggc ctttgcacga aaacggcaca
     2701 aggtgctcgc gcgcgcagcc ctcgcactga aaccgcgccc ggccgtgctc gaa
//
LOCUS       DASYRV010000049         3890 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_852443, whole genome shotgun sequence.
ACCESSION   DASYRV010000049 DASYRV010000000
VERSION     DASYRV010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3890
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_852443"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1479)
                     /locus_tag="VGQ24_01050"
     CDS             complement(<1..1479)
                     /locus_tag="VGQ24_01050"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEV8453443.1"
                     /translation="MIALPCMLYSMDLTVLNLAVPYLSADLKPSSSQLLWIVDIYGFL
                     VAGSLITMGTLGDRIGRRRLLLIGAAAFGAASVLAAFSTSAEMLIATRALLGIAGATL
                     APSTLSLIRNMFLDPAQRTAAIGVWVTSYSVGGAIGPLLGGILLEYFWWGSVFLLGVP
                     IMVLLLVLGPVLLPEFRDPEAGRLDLLSAAQSLAAVLLVIYGLKKLAENGPGWPPALA
                     IMAGLAIGALFVHRQRMLTHPLIDLGLFRVPAFSASLAAYTLGTLVAFGVYIFIAQYL
                     QLVVGLSPLQAGLATVPSMAAFIVGSMVVPALARRVPPAYLMGAGMVIAAIGFGMLTR
                     VDRTSGLTVLITGSIIYSLGISPVVILATDLIVGSAPVERAGAASAISETSSELGGAL
                     GIAIFGSIGTAVYRRAMWEAMPGGVPPEAMEAARSTLGGAVAVALQLPQGLSAELLGT
                     AREAFTRAFQLTAAISAAVALMTAFLAMALLRSVRVGDRPASI"
     gene            complement(1566..1961)
                     /locus_tag="VGQ24_01055"
     CDS             complement(1566..1961)
                     /locus_tag="VGQ24_01055"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HEV8453444.1"
                     /translation="MPKVVCDMSVSLDGFITGPNDSVEQPLGESGERLHEWVYGLASW
                     RERHGMAGGKSGEDSEILDVSVAGGANLVQQCLSARLLDEIQIHLVAILLGGGRRMFD
                     HVGPDQVALEKTRVIESPSVTHLRFRVVK"
     gene            complement(2033..2407)
                     /locus_tag="VGQ24_01060"
     CDS             complement(2033..2407)
                     /locus_tag="VGQ24_01060"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEV8453445.1"
                     /translation="MLGNTDAIATIAVKKIEPARKFYEGTLGLKPMPTQETGVQTYKS
                     GNSNVLVYESQYAGTNKATAATWTVEDLEGVVRDLKAKGIRFEHYDMPGATRKGDIHG
                     AGKTKAAWFKDPDGNILAVVSG"
     gene            complement(2446..2874)
                     /locus_tag="VGQ24_01065"
     CDS             complement(2446..2874)
                     /locus_tag="VGQ24_01065"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEV8453446.1"
                     /translation="MSHTVVHFEIPADQPERAVKFYRDLFGWDIEHFGPSGAGGIDYW
                     LVKTVATDAEGKPTEPGVNGGLMRRMMPGQTPVNYISVENVDEFARKAERLGAKVVVP
                     KMPVPGMGWFSQLTDTEGNIFAIWEHDPAATEAAPAGQRA"
     gene            3041..3715
                     /locus_tag="VGQ24_01070"
     CDS             3041..3715
                     /locus_tag="VGQ24_01070"
                     /inference="COORDINATES: protein motif:HMM:NF028235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEV8453447.1"
                     /translation="MAETMVKRRGRDPDVTRNKLLKAAFEEIYRRGFQAASLDTILAR
                     AGVTKGALYHHFPDKASLGYAVVDEVVKGLLLERWGVLEPPSDDPVTTLQRILRRRAA
                     SLTPREVELGCPLNNLAQEMSPLDQRFRRGVNATFDIWTDAVAKELERGQAEGTVRRE
                     VDAGKIAAFVVASIEGSFGLAKGAQSAAMLRSNLEVLSSFLESLRPTPKAGKTGSPRG
                     PAARAR"
BASE COUNT          704 a         1282 c         1234 g          670 t
ORIGIN      
        1 gatggaggcc ggtcgatcgc cgacccggac acttcgcagc agagccattg ccaggaaggc
       61 tgtcatcagc gcaaccgcgg cactgatggc cgcggttaac tggaaggctc gagtaaaggc
      121 ttcacgcgcc gtcccgagca gctcggcgct gagcccctgg ggaagttgca gcgcgaccgc
      181 cacggcgcca ccgagtgtgc tccgcgcggc ctccatcgcc tcgggtggga cgccacccgg
      241 cattgcctcc cacattgcgc gacggtaaac ggcggtgccg atgctgccga agatcgcgat
      301 gccgagtgcc ccgcccagct ccgagctggt ctccgagatc gccgacgcgg ctccggcccg
      361 ttcaaccggg gcgctcccga cgatgaggtc ggtcgccagg atgacgacgg gggagatgcc
      421 cagggagtag atgatggacc cggtaatgag caccgtgagg ccggaggtgc ggtccacccg
      481 ggtcagcata ccgaagccga tggccgcgat gaccatgccg gcgcccatca ggtacgccgg
      541 cgggacccgt cgtgcgagcg ccggcaccac catggaaccc acgatgaacg cggccatcga
      601 gggcaccgtc gccagccccg cctgcaacgg cgataggccg accaccagct gcagatactg
      661 agcgatgaag atgtagaccc cgaatgccac gagcgtgccg agggtgtacg cggccagcga
      721 cgcgctgaag gcgggaaccc ggaagagtcc cagatcgatc agcgggtggg tcagcatacg
      781 ctgccggtgc acgaagaggg cgccgatggc gaggccggcc atgatagcca gcgccggcgg
      841 ccaacccggc ccattctcgg cgagcttctt gagaccgtag atcacgagga gcacggccgc
      901 cagcgattgg gccgcactga gcaggtccaa ccggcccgcc tccggatcac ggaactcggg
      961 cagcagcacc ggccccagca ccagcagcag caccatgatc gggaccccca gcaaaaacac
     1021 cgagccccac cagaagtatt ccagcaggat cccgccgagc agcggcccga ttgcgccgcc
     1081 gaccgagtag ctggtgaccc agaccccgat ggcggcggtg cgctgcgccg ggtcgaggaa
     1141 catgttgcga atcagggata gtgtggacgg cgccagggtc gcaccggcga tgccgagtag
     1201 cgcgcgggtg gcgatcagca tctcggcgct ggtggagaac gccgcgagaa cggacgcggc
     1261 cccgaatgcg gcggcgccga tcaggagcag ccggcggcgg ccgatccggt cgcccagcgt
     1321 gcccatggtg atcagcgaac cggcgaccag aaacccatag atgtccacga tccacagcag
     1381 ctgggagctg ctgggcttga ggtccgcgct caggtacggc accgcgaggt tcagcaccgt
     1441 gaggtccatg gagtagagca tgcacggaag cgcgatcacc gcgagcccga tccattcccg
     1501 ccttcccgca cgaggagggg cgacacgtgc ggtcgtttga gcttcttccg ggatggccac
     1561 ggaccttact tcacgacgcg gaatctgagg tgggttacac tcggggactc gattaccctg
     1621 gtcttttcca gtgcgacttg gtcggggccg acatgatcga acattctcct gccgccgccg
     1681 aggagtatgg ctacaaggtg gatctgaatc tcgtccagca gtcgggcact caagcactgc
     1741 tggacgagat tggcaccgcc tgctaccgaa acgtcgagaa tctcggaatc ctcgcccgac
     1801 ttgccgccgg ccatgccgtg acgctcgcgc cagctggcca gaccgtagac ccactcgtgc
     1861 agccgttcgc cgctctcccc caggggctgc tcgacgctgt catttgggcc ggtaatgaat
     1921 ccatccagtg acacggacat gtcgcaaacg acttttggca cagaccctcc ggcacccgat
     1981 ggagtactag gcgtcgacca ggacttgaac cccttttcga agtttcttcg tcttacccgc
     2041 ttaccacggc gagaatgtta ccgtccgggt ccttgaacca tgccgccttg gttttaccgg
     2101 cgccgtggat atcacccttt cgagtggcac ccggcatgtc gtagtgctcg aaccgaattc
     2161 ccttggcctt caggtcgcgg acaacgcctt ccaggtcctc gactgtccag gtagcggccg
     2221 ttgccttgtt cgtgccggcg tactgtgact cgtataccag gacattggag ttcccgctct
     2281 tgtatgtctg caccccagtc tcctgggtgg gcatcggctt cagcccgagg gtgccttcat
     2341 agaacttcct ggctggctcg atcttcttga ccgcaatcgt cgcaatagcg tctgtgtttc
     2401 ctagcaccgc aacctccctc caatgtgtat tccagactcc ggtcgttagg cccgttggcc
     2461 agccggagca gcctcggtgg cggctgggtc atgctcccag atggcaaaga tgttcccctc
     2521 ggtgtctgtc agctgggaga accatcccat tcccggaacc ggcatctttg gcaccacgac
     2581 cttggccccc aggcgctccg ccttccgggc aaactcgtcg acattctcca cgctgatgta
     2641 gttgaccggt gtctgccccg gcatcatccg gcgcatgagc ccgccgttga cacccggttc
     2701 ggtcggcttc ccttcggcgt cggtggcgac ggtcttcacc aaccagtagt cgatgccgcc
     2761 cgcgccggac ggtccgaaat gctcgatgtc ccagccgaag aggtcgcgat agaacttcac
     2821 tgcccgttcg ggctgatccg cgggaatctc gaaatgcacg acggtatgac tcatgacatg
     2881 cgctcctttc aggtcgattt acgtttcccc cgctgtcccg cttgctatac agaccggttg
     2941 gtatgtataa tacgcaaccc acgccgtcaa ggtgggttta caggctgaaa cggaaattgt
     3001 tacatacgga accgtaggca ggggccttcc ctggaatagc atggcagaga ctatggtgaa
     3061 gcgtcgtgga cgggatcccg acgtcacccg gaacaaactg ctcaaggccg cgttcgagga
     3121 gatctatcgg cggggattcc aggccgccag cctggacacc atcctggcca gggcgggggt
     3181 caccaagggc gcgctctacc atcacttccc cgacaaggcc tcgctgggct atgccgtggt
     3241 ggacgaggtg gtgaagggcc tgctgctgga gagatggggc gtcctggagc cacccagcga
     3301 cgatccggtc accacgctgc aacggatcct ccgccgtagg gcggccagcc tcaccccccg
     3361 tgaggtcgag ctcggatgtc cgctcaacaa cctggcgcag gaaatgtctc ccctggacca
     3421 gcgcttccgg cggggggtga acgctacctt cgacatctgg accgacgcgg tggccaagga
     3481 gctcgagcgg ggccaggcgg aaggcaccgt caggagggag gtggacgcgg ggaagatcgc
     3541 cgcattcgtc gtcgcctcca tcgagggctc attcggtctc gccaagggcg cccaaagtgc
     3601 ggctatgcta cgctccaatc tggaggtgct gagctcgttc ctagagagcc ttcgtccgac
     3661 gccgaaggcg ggcaaaaccg gatcgccgcg cgggcctgcg gcccgcgcgc gatgactggc
     3721 tgacggcatc ccgcattgat cgatgattta cctcctggcg atcggttccg ccttgttcta
     3781 tggggccgcc gacttcactg gcggccttgc cacccgacgc gccggtgcca tccccgtagt
     3841 ccttctctcc caggcgagtg ggctggtgct gctcgcactg atcctgccgc
//
LOCUS       DASYRV010000050         3134 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_436818, whole genome shotgun sequence.
ACCESSION   DASYRV010000050 DASYRV010000000
VERSION     DASYRV010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3134
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436818"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..694)
                     /locus_tag="VGQ24_01075"
     CDS             complement(<1..694)
                     /locus_tag="VGQ24_01075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453448.1"
                     /translation="MGANLIITAVTVLLQSPPADTTKPSPTFHHSDTVTAEPTPGLAF
                     ERLSDLLQYNRVQGLSLGLGYRVPVPGVRLTTGYGTIRYGFSDERVTGRLSLVRDSPE
                     ARLAISGYHDLTDLDPFSPGRSFTNTFNSLIAGHDNGDYALADGGAGTVEVSIGPALD
                     LSLTARVEHQHSTARVARSAINDFFGGSGLFPPNPPIKEGVFGSVVARLSGARRARWN
                     LALDVLGGAGQTM"
     gene            complement(676..1131)
                     /locus_tag="VGQ24_01080"
     CDS             complement(676..1131)
                     /locus_tag="VGQ24_01080"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEV8453449.1"
                     /translation="MPDTLPLQSMPAVFSPLAKALLDGFSEGVVVFDVDGRLLYANHP
                     AREALAGMDLSEGAPDLQPRLAALGGRLSPLRVGGLELGEAMFIPGIAGPTTLAAREK
                     EAIVKTLDSNNWKLAETARSLGISRTTLWRRLKAYGLHRDGRSKWAQTS"
     gene            complement(1242..>3134)
                     /locus_tag="VGQ24_01085"
     CDS             complement(1242..>3134)
                     /locus_tag="VGQ24_01085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEV8453450.1"
                     /translation="VTLGEQWPRLTTAFYHGGEPIRVIRPFLEGEVERPFLLAMTAAG
                     QSALNVRGLDTVVIYDARYGNVVERGRNVLHRLYLGANEILQMAGRVHGRVPNGEVSI
                     LSDRDLDFITLRPTPPEFQLAGDAERVAITCAALGVDARDLELPVPLDRTAYGRAVEL
                     LTSRGLVENGRLTGYGREVEALPVERAWGELLVHADEALIPMVAVCSNIDSLHRMTRE
                     ERDLHGVIVNGSDHLTAYNLFAEAVNQHGYVGQVYGLPRHLFEEELEEWAERRGVLVK
                     AIEDTALGLASVYRSLELPLPKQLPYASKDIRSGWADLIARIMPFDLVIDGHTADGHE
                     ARVSKTSVAGSWGAVAGNLRFFADRFGIARAGIEGTTISYDLVRRYAALGPPKIVLGG
                     LRKHQRLMIERRLSYFGFDLDTELEPIEGEIPRDLQPAARDVLTQALVEGETTHPDQH
                     RLRRVIAELDELWRRSGGTLRSLSPEQIRIRIREQLEWVTSWDDVLRTRIVLEPSELV
                     DADTRKNLEALPGRLHLRGDAVPVEYEVEGNLGVARVRLREGQAKRLRLEELPRLDRP
                     LRFAVQRGHHPPILADSIPALQALLQRAPTGERHDGRSAQERKGKRRHGKTNRRSGRP
                     PGRSRH"
BASE COUNT          536 a         1026 c         1037 g          535 t
ORIGIN      
        1 ccatagtctg acctgcgcca ccgagcacgt ccagcgcgag gttccaacgc gcgcggcgag
       61 ctccactgag ccgtgctaca acgctgccga acaccccctc ctttattggc ggattggggg
      121 ggaacaggcc gctgccgccg aagaaatcgt tgatcgccga gcgggcgacc cgcgcagtgc
      181 tgtgctggtg ctcgacgcgc gcggtgagac tgagatccag tgccggcccg atcgatactt
      241 cgaccgtgcc cgctccgccg tccgcgaggg cgtaatcacc gttgtcgtga ccggcaatga
      301 ggctgttgaa ggtattggtg aagctccggc ccggtgagaa cgggtccagg tcggtgaggt
      361 cgtgatagcc actgatcgcc agccgagcct ccggcgaatc acgcaccagg ctgagccgtc
      421 cggtgaccct ttcatcgctg aagccgtacc tgatggttcc gtagccggtg gtaagacgga
      481 ccccgggcac cggcacacga tagccgagcc cgagcgacag tccctggacc cgattgtact
      541 ggagaagatc cgagaggcgc tcgaaggcca agccgggcgt gggctcggcg gtaaccgtgt
      601 cgctgtggtg gaaagtcggg ctgggtttgg tagtgtcggc tggaggagac tgaaggagaa
      661 cggttacggc ggtgattatg aggtttgcgc ccatttgctc cggccgtcgc gatggagccc
      721 gtacgccttc agccggcgcc agagggtggt ccggctgata ccgagcgacc gagcggtctc
      781 agcgagcttc caattgttcg aatccagggt cttgacgata gcctctttct cccgggccgc
      841 caacgtggtg ggtccggcaa tacccggaat gaacatggct tcgcccagct cgagaccgcc
      901 cacccgaaga gggctcagcc gaccacctag tgccgccagc cggggctgca ggtccggcgc
      961 cccttccgat aaatccatcc cggctagggc ctccctggcg gggtgattgg catatagcaa
     1021 acgcccgtcc acatcgaaga ccacgacccc ctcactgaag ccatcaagga gggccttggc
     1081 caatggcgag aagaccgccg gcatggactg gagaggcagg gtgtctggca tagttgaaga
     1141 tacgcggtgg taggcctagg ggtttccggc ccggtgaaca acgccatcct gtattcaaga
     1201 cgtgcacccg cgatcagggt gcacaatgca gcgttgccga gctagtgtcg cgagcggccg
     1261 ggaggccgac cgctcctccg gttcgtcttt ccgtggcggc gcttgccctt gcgctcctgg
     1321 gcgctacggc cgtcgtggcg ctcgccggtg ggcgcccgtt ggagcagcgc ctgcaaagcc
     1381 ggaatggagt cggccaggat ggggggatgg tgtccccgct gcactgcaaa tcggaggggg
     1441 cggtcgagcc ggggcagctc ctccagccgg agtcgtttgg cctgtccttc ccggaggcgc
     1501 acgcgcgcga cccccaggtt gccttcaact tcgtactcca ctggcacggc atcaccccgc
     1561 aggtgcaacc gccccggaag agcctcgagg ttcttccgcg tgtccgcgtc cacgagctct
     1621 gatggctcga gaacaatccg ggtacgcagg acgtcatccc agctggtcac ccactccagc
     1681 tgctcgcgga ttcggatcct gatctgctcg ggtgacagcg atctgagtgt tccccccgac
     1741 cgccgccaga gctcgtcgag ctcggcaatc acgcgacgca ggcggtgctg atccggatgc
     1801 gtggtctcac cttccaccag tgcctgggtg agcacgtctc gcgcggctgg ttgcaggtcg
     1861 cgcgggatct cgccttcgat cggctcgagc tcggtatcca ggtcaaagcc gaagtagctg
     1921 agccgccgct cgatcataag gcgctgatgc ttgcgcaggc cgccgagcac gatcttcggc
     1981 ggccccagcg ccgcgtagcg gcgaacgagg tcatacgaga tagtggtgcc ctcgatcccc
     2041 gcccgggcga tcccaaaccg atcggcgaag aaccgtaggt taccggcgac tgccccccag
     2101 cttcccgcga ccgaggtctt cgagacccgg gcttcgtgac catcagcggt atgcccgtcg
     2161 atgacgaggt cgaacggcat gatccgggcg atcaggtcgg cccagccgct gcggatgtcc
     2221 ttggaggcgt agggaagctg cttcggcagc ggcagctcga gcgagcggta caccgatgcc
     2281 agcccgaggg cggtgtcctc gatggctttc accagcacgc cacggcgttc ggcccactct
     2341 tcgagctcct cctcgaacaa atgccgcggg agtccataga cctggcccac atagccgtgc
     2401 tggttcaccg cttcggcaaa cagattgtac gcggtgagat gatcactgcc gttcacaatg
     2461 acgccatgaa ggtctcgttc ttcccgcgtc atccggtgta gcgaatcgat gttggagcag
     2521 accgccacca tcgggatgag cgcctcgtcg gcgtggacca gcagctcgcc ccaagcacgc
     2581 tccaccggca gagcctcgac ctcgcgcccg tagccggtca gccggccgtt ctctaccagt
     2641 ccacggctag tgagcagttc cacggcgcgg ccgtaggcgg tgcggtcgag ggggaccggc
     2701 agctcgaggt cccgcgcatc caccccgagg gcagcacagg tgattgccac ccgttcggca
     2761 tctccggcga gctgaaactc cggcggtgtc ggccgcagcg tgatgaagtc gaggtcccga
     2821 tcgctcagga tggacacctc gccgttcggc acccggccgt gcacccgacc cgccatctgc
     2881 aggatctcgt tggctccgag atacaggcga tggagcacgt tccggccccg ttccaccacg
     2941 ttgccgtagc gggcatcgta gatgaccacg gtgtcgagac cccggacgtt gagcgcggac
     3001 tggccggctg ccgtcatcgc gagcaggaat gggcgctcga cttcgccttc gaggaaggga
     3061 cggatgaccc ggatcggctc tccgccgtga tagaacgcgg tggtcagacg gggccactgc
     3121 tcgcccaggg tgac
//
LOCUS       DASYRV010000051         1645 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3967165, whole genome shotgun sequence.
ACCESSION   DASYRV010000051 DASYRV010000000
VERSION     DASYRV010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3967165"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1591)
                     /locus_tag="VGQ24_01090"
     CDS             complement(<1..1591)
                     /locus_tag="VGQ24_01090"
                     /inference="COORDINATES: protein motif:HMM:NF012926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HEV8453451.1"
                     /translation="MDWLCFPRFDAPSVFGHLLDDRAGHWSIRPANTTSTRRRYLDNS
                     LVLETEFETPGGRLTLTDALAMGPNERGHELGARSPHALLRRAECTRGTVELEMEYAP
                     RPEYGQVRPTLRDVPGGVLAKGDGSVLVLSSGVPQVMEDGSARARVTLRAGEMRAFAL
                     QYLPAETACWPEEEIEERLRETVESWRSWSAMHQRYDGPWPELVQLSGRVLQGLTYQP
                     TGAIVAAPTTSLPEAVGGERNWDYRYTWVRDASLTLEALWVAACPDEAKQFFDFLSGA
                     AVRQLEEEGDLQIMFGVTGERDLTERELPHLTGWRDSRPVRIGNGAWNQRQLDVYGEL
                     LSAAHLLREQIGAFTPATASFLVDVADTALRRWREPDHGIWEIRDEPRHFLHSKLMCW
                     VALDRAVELADAMGAPAAKVTRWREEREEIRRAILEQGWSERARAFTQTLGGDVLDAS
                     TLLIPIVGFLPGDDPRVRATVDAIAERLTDSRGLVYRYKMDDGLEGKEGSFLLCSFWL
                     AHALALGGDIGRAREVFGRAAA"
BASE COUNT          271 a          612 c          519 g          243 t
ORIGIN      
        1 acgccgccgc ccgcccgaat acctcccgcg cccgcccgat atctccgccg agcgcgagcg
       61 cgtgggccag ccagaagctg cagagcagaa acgatccctc tttcccctcg aggccatcgt
      121 ccatcttgta gcggtacacc aggccgcgag aatcggtcag ccgctcggcg atcgcgtcca
      181 ccgtcgctcg gactcgcggg tcgtcccccg gcaggaaccc cacgatcggg atcagcaggg
      241 tcgaggcgtc gagcacatcg ccgcctagcg tctgggtgaa ggcccgggcc cgctcgctcc
      301 agccctgctc caggatggcg cgccgaatct cctcccgctc ctcccgccag cgggtcacct
      361 tcgcggccgg ggcacccatc gcatcggcca gctcgaccgc ccggtcgagc gccacccaac
      421 acatgagctt ggagtggaga aaatgtctgg gctcgtcgcg gatctcccag atcccgtggt
      481 ccggctcccg ccaccgtcgc agcgcagtat cggcgacatc tacaaggaaa ctggcggtgg
      541 caggggtgaa tgcaccgatc tgctcccgca gcaggtgcgc cgcgctcaag agctcaccgt
      601 agacgtcgag ctggcgctgg ttccaggcgc cgttcccgat tcggaccggg cggctgtcac
      661 gccagccagt caggtgcggc agctcgcgtt ccgtcaggtc gcgctcgccg gtcacgccga
      721 acatgatctg gaggtcgccc tcttcctcga gctgccggac cgcggctccg gagagaaaat
      781 cgaagaactg cttcgcctcg tcgggacagg cggccaccca cagcgcctcg agggtcaagc
      841 tcgcgtctcg gacccaggtg tagcgatagt cccaattgcg ctcgccaccg accgcctcgg
      901 gcagcgaggt cgtcggtgcc gcgacgatag cgccggtcgg ctgataggtg agcccctgca
      961 acacccgccc gctcagctgc accagctccg gccagggacc atcgtagcgc tggtgcatcg
     1021 ccgaccagct ccgccacgat tcgaccgtct ctcgcaaacg ctcctcgatc tcctcctcgg
     1081 gccagcaggc agtctcggcc gggaggtatt ggagggcgaa cgcccgcatc tccccggccc
     1141 gcagggtcac gcgggcccgc gcacttccat cctccatcac ctgcggcaca cccgatgaga
     1201 ggactagcac ggacccatca cccttcgcca gcactccccc cggtacgtcc cgcaacgtcg
     1261 gccgcacctg gccgtactcc ggcctcggcg cgtactccat ctcgagctct accgtccccc
     1321 tggtgcactc ggctcggcgc agcaacgcat gcggcgaccg ggcacccagc tcgtggcctc
     1381 gctcgttagg acccatggca agagcgtcgg tcagcgtgag acggccgccc ggcgtctcga
     1441 actccgtctc cagcaccagc gagttgtcca ggtaccgtcg ccgagtcgag gtggtgttgg
     1501 cggggcgaat ggaccagtgt cccgcccggt cgtccagcag gtgaccaaag acggatgggg
     1561 cgtcgaaccg gggaaagcag agccagtcca ccgatccaga gcggtggacc agggcggccg
     1621 aatggcagtc ggagaggagg gcgta
//
LOCUS       DASYRV010000052         7187 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_635132, whole genome shotgun sequence.
ACCESSION   DASYRV010000052 DASYRV010000000
VERSION     DASYRV010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7187
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_635132"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1491
                     /locus_tag="VGQ24_01095"
     CDS             <1..1491
                     /locus_tag="VGQ24_01095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEV8453452.1"
                     /translation="VGNRLIEKLRARMETLRVGSPLDKSVDIGAIVAPVQLAQIEALV
                     KQGIEEGATCWQPSWSCPKDGLFYPPTLFTDVTPAATIAQVEIFGPVVVLMTFRTPAE
                     SVEIANNTRYGLAASVWSENLNTALDIAPQLKAGTVWVNCTNLFDAASGFGGYRESGY
                     GREGGKEGLWEYVKPGRAVERQSDSSAAGPTPAAPPHRRTAAQSSAAPPHRRTALPAI
                     DRTPKLYIGGKQVRPDATYTLPISDAAGKLLAEVPRGNRKDIRNAVEAAHQAEESWGK
                     ATAHTRAQVLYYFAENLAVREAEFTARLSALTSPSSPSDREVRAAIERAFYYAAWADK
                     YDGRVHHTPFRNVTLAMNEPIGVLGLVAPADAPLLGFLSLVLPALAMGNPVVAIPSER
                     WPLLATDLYQVFDTSDVPGGAVNIVTGTRKELVPVLAAHDDVDGVWFFGPRAEAAELE
                     KLSAGNMKRCFVDWEPRDWLDPHDGQGEEFLREATQVKNIWVPYGA"
     gene            complement(1492..1899)
                     /locus_tag="VGQ24_01100"
     CDS             complement(1492..1899)
                     /locus_tag="VGQ24_01100"
                     /inference="COORDINATES: protein motif:HMM:NF023514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3568 family protein"
                     /protein_id="HEV8453453.1"
                     /translation="MRSTTRYLVTGMLAGLPAATSGCILAAAGAGAGGAIYVTERGAE
                     AQVAAPVARTFDATRQVFQDLGITETRTSNEQSGSTEKRTLEGSKDDREIEVNLRTEG
                     SGAHVDVVVKKTAVTWDKDFAKEILNKIVERTK"
     gene            complement(1953..2822)
                     /locus_tag="VGQ24_01105"
     CDS             complement(1953..2822)
                     /locus_tag="VGQ24_01105"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEV8453454.1"
                     /translation="MTTPTTTPIRNVSDTARWVAFYRAMESERPDAIFHDPFARRLAG
                     EQGEAIVNAMPKGRQFAWPMIVRTAVMDEIILRVIAEHGVDCVLNLAAGLDARPWRLP
                     LPASLLWVDVDLPVMLDHKEATLQGEKPSCRYEGVRCDLSNGAERRALFRRIGSHAFR
                     ALVITEGLLVYLTPAAVAELAKDLHSEESFAFWLSDLGSPGLLKLLAKTWGSTLAAGN
                     APMQFAPAEGTRFFGPYGWREKEYRSMFEESIRLKRTMRFARFWRLIGKLYPRKKQEE
                     FKRFSGIILLERV"
     gene            complement(2819..4153)
                     /locus_tag="VGQ24_01110"
     CDS             complement(2819..4153)
                     /locus_tag="VGQ24_01110"
                     /inference="COORDINATES: protein motif:HMM:NF013300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-fucosidase"
                     /protein_id="HEV8453455.1"
                     /translation="MSKRQRIAALLSGGLLVLAPLAESPLGAQTAEPVPAERLAAREW
                     FRDARFGLFIHWGVYSLLGQGEWVMQNRELSITSYEWLASTFDPVKFAARDWVALAKA
                     AGMRYLTITARHHDGFSMFGSDATRYDIVDWTRFGRDPLKELAEECRAQGIRLFFYYS
                     QLDWHHPDYWPRGRTGGATGRPEQGEWSRYLDFMDRQLEELLTRYGPIGGIWFDGMWD
                     KPDADWRLPRTYGLIHRLQPAALIVPNHHQAPLPGEDVQTFEQDLPGANTAGFNTTQI
                     GSLPLETSLTMNRSWGFNLTDHNFKSARELIHYLARAAGNDANLLLNLGPRPDGTIQP
                     EALERLQEVGRWLRVHGPSVYGTRGGPVSPRSWGVTTQRGDSVFVHLLDWPDRVLALP
                     ALDRRVRRATLLASGEPVGVQQSASGITLTLPRAAAGEPDRVVVLETTGSKR"
     gene            complement(4150..7062)
                     /locus_tag="VGQ24_01115"
     CDS             complement(4150..7062)
                     /locus_tag="VGQ24_01115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453456.1"
                     /translation="MSYRLVGPSRGGRVTTVTGVPSQPRTFYMGVASGGIFRSTDGGE
                     GWVPLTDGKVPLGSSGSIAVAESNPDIIYFGTGSDGVRSNVSTGRGVYKSSDGGTSWS
                     FSGLYNAGQIGAVRIHPTDPNTVWVAAYGDLFKPNAERGVFKTTDGGKSWKKTLYVSD
                     STGAIDVELQPGNPLVVYAWMSRIERKPWTIISGSREGGFYKSSDGGETWSHLAAGLP
                     NQLIGKANLAVTAANPSRIYALIEAKPGGGLYRSDDAGQSWSLVNSQGSLIQRPFYYT
                     TLGADPTNANVVYAGAEGFFKSTDGGKTMSPLRTPHGDNHDIWINPRDGNTLIQSNDG
                     GANVSFDGGRTWSSQMNQPTSEIYGVWLDQAFPYRLYGAQQDNSTLIISSVANPYNRE
                     DWRTGPGCETGPIMPHPKDPNIVYGSCKGQYEVMSLATGQSKRYWVGAQSLYGNPARD
                     LILRFQRVSPMATSPHDPNVLYYGSQHLHRTRDKGVTWEKISPDLTAHPDCCQGASGE
                     PITRDVTGEEFYSTLYAITESPHEAGVIWTGANDGPFHLTRDNGKRWKNITPKDLPPG
                     GRVAWIEASPHRKGSAYYAVYRYLLGDYQPYLYRTDDYGATWKRLTDGKNGIPADWPT
                     RVVREDPDREGLLYAGTEFGLFVSFDNGIRWQPFQLNLPNVPINDIRVHRKDLVIATQ
                     GRALWIFDDLSPLHQLGARINASEVQLYRPRDGYRTRAGAEYLTPALTYYLPSTPAGV
                     VKVEILDSVGKVVNSYGSDAAAPAGRAGRGGGGGGGADPDDPDAPAFRFGGGVVSRVS
                     KTAGTNRFVWDLRHSSGVTAPPGRYQARLTVGETVRTVPFTLRIDPRLAEDGTTVADL
                     REQFEHNLRMRALVSEVNQVVARVRAAQTRLQGSSGAAADTLAKVQAIGAKLLTEPVR
                     YGKPGLQAHISYLNGMTNAVDQKIGRDAIARYQVLKQELDTLAAELDRVLGPAAQP"
BASE COUNT         1137 a         2409 c         2400 g         1241 t
ORIGIN      
        1 gtcgggaacc gcctgatcga gaagctgcgg gcccgcatgg agacgctccg cgtcgggagc
       61 ccgctcgaca agtcggtgga catcggggcg atcgtggcgc cggtgcagct cgcccagata
      121 gaggccctgg tcaagcaggg catcgaggag ggcgccacct gctggcagcc gagctggagc
      181 tgccccaagg acgggctgtt ctatccgccg acgctgttca ccgacgtcac ccccgccgcc
      241 accatcgcgc aggtggagat cttcgggccc gtggtggtgc tgatgacctt ccggaccccg
      301 gcggagtcgg tcgagatcgc caataacacg cgctacggcc tggccgccag cgtgtggagc
      361 gagaatctca acaccgcgct cgacatcgcc ccccagctca aggcgggaac ggtctgggtc
      421 aactgcacca acctgttcga cgccgcctcg ggcttcggcg gctatcggga gtcgggctat
      481 gggagggaag gggggaaaga ggggctctgg gagtatgtga agccgggcag agcggtagag
      541 cggcagagcg acagtagtgc ggctggcccg actcccgccg caccgccgca ccgccgcacc
      601 gccgcacagt catctgccgc accgccgcac cgccgcactg ccctcccggc catcgaccgc
      661 acgcccaagc tctacatcgg cggcaagcag gtccgacccg acgcgacgta cacgctgccg
      721 atcagcgatg ccgccggcaa gctgctcgcc gaagtgccgc gcggaaatcg caaagacatc
      781 cgcaacgcgg tcgaagccgc gcaccaggcg gaggaaagct ggggtaaggc cactgctcat
      841 acccgcgccc aggtgctcta ctatttcgcc gagaacctgg ccgtcagaga ggcggagttt
      901 accgcccgac tgtccgcact gacctcaccg tcctcaccgt ccgaccgcga agtccgcgcc
      961 gcgatcgagc gcgcgttcta ctacgcggcc tgggccgaca agtacgatgg ccgggtccat
     1021 cacacgccct tccgcaacgt caccctcgcg atgaacgagc cgatcggcgt gttagggctc
     1081 gtggcgcccg ccgacgcgcc gttgctcggc ttcctctcgc tcgtgctgcc cgcgctggcg
     1141 atggggaatc ccgtcgtggc gattccctcg gagcgctggc cgctgctggc caccgatctc
     1201 taccaggtgt tcgacacctc ggatgtaccg ggcggcgccg tcaacatcgt gaccgggaca
     1261 cgcaaggagc tggtgccggt gctggccgcc catgacgacg tggatggcgt ctggttcttc
     1321 ggcccgcgtg ccgaggcagc cgagctcgaa aagctctcgg cgggcaacat gaagcggtgc
     1381 tttgtggatt gggagccgcg ggactggctg gacccccacg acggccaggg cgaggagttt
     1441 ctgcgcgagg cgactcaggt caagaacatc tgggtgccct acggggcgta gctacttggt
     1501 ccgctccacg atcttgttca ggatctcctt cgcgaagtcc ttgtcccaag tcaccgcggt
     1561 cttcttgacc acgacatcca cgtgagctcc gctgccttca gtccggaggt tcacctcgat
     1621 ctcccggtcg tccttgctgc cttcgagcgt gcgtttctcg gtgctgcctg actgctcgtt
     1681 actggtccgc gtctcggtga tgccgaggtc ctgaaacacc tggcgggtcg cgtcaaaggt
     1741 ccgtgcgacc ggcgccgcga cctgggcctc ggcgccccgc tcggtaacgt agatcgcacc
     1801 acccgcaccc gctcccgcgg cggccaggat gcagccgctg gttgcggcag gcaagcccgc
     1861 cagcattccc gtcaccagat atcgtgtcgt gcttcgcatg cgtgctctcc tcgttgaggg
     1921 acggacgccg ggcagcgcgc gttgtcgcac agtcagaccc gctcgagcag aatgatcccc
     1981 gaaaagcgct tgaactcttc ctgcttcttc cggggataga gcttcccgat cagcctccag
     2041 aagcgggcaa agcgcatggt ccgcttgagc cggatgctct cttcgaacat cgagcggtat
     2101 tccttctccc gccagccata gggaccgaag aatcgggtgc cttccgccgg cgcgaattgc
     2161 atcggggcat tgcctgccgc cagggtcgag ccccaggtct tcgccagcag cttgagcagg
     2221 ccgggactgc ccagatcgct cagccagaag gcgaagctct cttcgctgtg gaggtccttg
     2281 gcgagctcgg cgaccgcggc cggcgtaagg tagaccagca agccttcggt gatgacgagc
     2341 gcgcggaagg cgtgactccc gatcctgcgg aagagcgccc ggcgttccgc gccgttgctg
     2401 agatcacaac gcacgccttc gtagcggcag ctcggctttt ccccctggag cgttgcctct
     2461 ttgtgatcga gcatgaccgg gaggtccacg tcgacccaga gcagggaagc cggcagcggg
     2521 aggcgccagg ggcgcgcatc gagtcccgcc gccaggttga ggacgcagtc cacgccgtgc
     2581 tccgcgatca cccgcaggat gatttcgtcc atcacggcgg tccggacgat catcggccag
     2641 gcgaactgcc tgcccttggg catcgcattg acgatcgcct cgccctgctc cccggccagg
     2701 cggcgggcga agggatcgtg gaagatcgcg tcgggtcgct ccgactccat ggcgcgatag
     2761 aaggcgaccc agcgtgccgt gtcggagacg ttgcggatgg gtgtagtggt cggcgtggtc
     2821 atcgcttgct gcccgtagtt tccagcacca cgacccggtc gggctccccc gcggccgcgc
     2881 gcggcagtgt gagcgtgatc ccgctcgccg actgctggac cccgaccggc tcgccgctgg
     2941 ccagcaaggt tgcccgcctg acccgccggt cgagggccgg cagcgcaagc acgcggtcgg
     3001 gccagtcgag caggtggacg aagaccgaat cgccgcgctg ggtggtgact ccccagctgc
     3061 gcgggctcac cgggccaccg cgggtcccgt ataccgacgg tccatggacc ctgagccagc
     3121 ggccgacctc ctggagccgc tcgagggctt ccggttggat ggtgccgtcg ggccggggac
     3181 cgaggttcag cagcagattg gcatcattcc ccgccgcccg cgcgaggtag tggatcagct
     3241 cgcgcgcaga cttgaagtta tggtcggtga ggttgaatcc ccaggaccga ttcatcgtca
     3301 gcgaggtctc caacggcagc gagccgatct gagtggtgtt gaatccggca gtgttcgctc
     3361 ccgggagatc ttgctcgaag gtctgcacat cctcgccggg gagcggcgct tgatggtgat
     3421 tcggcacgat cagcgccgcg ggctgcagtc ggtggatcag gccgtaagtg cgaggaagcc
     3481 gccagtcggc gtccggcttg tcccacatgc cgtcgaacca gatgcccccg atcgggccgt
     3541 atcgcgtcag gagctcctcg agctgccggt ccatgaaatc gaggtagcgg gaccactcgc
     3601 cctgctccgg cctgccggtc gcgccgccgg tgcggcccct cggccagtag tcggggtggt
     3661 gccagtccag ctgggagtag tagaagaaaa gccggatccc ctgtgcgcgg cattcctccg
     3721 ccagctcctt gaggggatcg cgtccgaatc gggtccagtc cacgatatcg tacctggtcg
     3781 cgtccgaccc gaacatcgaa aaaccgtcat gatgacgcgc ggtgatcgtc aggtagcgca
     3841 ttccggcggc tttggcgagc gcgacccagt cccgcgccgc gaacttcacc ggatcgaacg
     3901 tcgaggccag ccattcgtaa ctcgtgatgc tgagctcgcg attctgcatc acccactcgc
     3961 cctgaccgag caggctgtac actccccagt ggatgaacag cccgaagcga gcgtcgcgga
     4021 accattcgcg cgccgcgagt cgctccgccg gaaccggctc ggcggtttgc gcaccgagag
     4081 gagactcggc gagcggcgcc agaaccagga gtcctccaga gaggagcgcc gcgatccgct
     4141 ggcgtttgct caaggctgcg cagccggccc taacacgcgg tcgagttcgg cggccagcgt
     4201 gtcgagctcc tgcttcagca cctgatatcg cgcgatggca tcgcgcccga tcttctggtc
     4261 taccgcgttg gtcatcccgt tgagatagct gatgtgcgcc tgcagcccgg gcttgccgta
     4321 acgcaccggc tcggtgagca gcttcgcgcc gatcgcctgc actttggcca gcgtgtccgc
     4381 cgcggcgccg ctcgagccct gcagccgagt ctgggcggcc cgcacgcgcg ccacgacctg
     4441 attcacctcg ctcaccaggg cccgcatgcg gagattgtgc tcgaactgtt cacgcagatc
     4501 cgctacggtg gtgccgtcct ccgcgagccg gggatcgatc cgcagggtga acgggacggt
     4561 ccgtacggtc tccccaaccg tcaggcgagc ctggtaccgc cccggcggag ccgtgacgcc
     4621 cgacgaatgc cgcaggtccc agacgaaccg gttggtcccc gccgttttgc tgacccggct
     4681 gacgacgccc cctccgaagc gaaaggcggg ggcatccgga tcatcgggat cggctccgcc
     4741 cccgcccccg ccgccgcgcc cggcgcgtcc tgctggagct gccgcgtcgc tcccgtagct
     4801 gttgaccacc ttgcctacgg aatcgaggat ctcgactttg acgacccccg cgggagtcga
     4861 gggcaggtag taggtcagcg cgggagtcag atactcggcg cccgcccggg tgcgatagcc
     4921 atcgcgcggg cggtacaact gaacctcgct cgcgttgatc cgcgcgccca actggtgcag
     4981 cggcgagaga tcgtcgaaga tccagagcgc gcggccctgc gtggcgatca ccaggtcctt
     5041 gcggtggacc cgaatgtcgt tgatcggcac gttcggcagg ttgagctgga agggctgcca
     5101 gcggatcccg ttgtcgaaag aaacgaacag cccgaactcg gtgccggcat agagcagtcc
     5161 ctcgcgatcc ggatcctcgc gcacgacccg ggtaggccag tcggcgggga tcccattctt
     5221 cccgtcggtg agccgcttcc aggtcgcccc atagtcgtcg gtgcgataga gatagggttg
     5281 gtagtcgccc agcaagtagc ggtacacggc gtagtaggcg gagcctttgc gatgcggtga
     5341 ggcctcgatc caggccaccc ggccgccggg cgggagatcc ttgggcgtga tgttcttcca
     5401 gcgcttcccg ttgtcgcggg tgaggtgaaa ggggccatcg ttggcgccag tccagatcac
     5461 gccagcttcg tggggcgact ccgtgatcgc gtagagcgtg ctgtagaact cctcaccggt
     5521 cacatcgcgc gtgatcggct cgccgctcgc cccctggcaa cagtcgggat gcgcggtcag
     5581 gtccggagag attttttccc aggtgacgcc cttgtcgcgc gtccggtgca agtgctgcga
     5641 gccgtagtac agcacgttgg gatcgtgcgg cgaggtcgcc atcggcgaga cgcgctggaa
     5701 acgcagaatc agatcgcggg cgggattgcc gtagagggac tgcgctccca cccagtaccg
     5761 cttggactgg cccgtcgcga ggctcatcac ctcgtactgc cccttgcagg aaccgtagac
     5821 gatgttggga tccttggggt gcggcatgat aggaccggtc tcgcagcccg ggccggtgcg
     5881 ccaatcctcg cggttgtatg ggttcgccac gctgctgatg atgagcgtgg agttgtcctg
     5941 ctgggcgcca tagagccggt aggggaaggc ctgatccagc cagacgccgt aaatctccga
     6001 ggtaggctgg ttcatttgcg atgaccaggt gcgcccgccg tcgaacgaca cgttcgcccc
     6061 gccgtcgttg gactgaatca gcgtgttgcc gtcacgcgga ttgatccaga tgtcgtgatt
     6121 gtctccatgc ggcgtgcgga gcgggctcat cgtcttgccg ccgtcggtgg acttgaaaaa
     6181 cccctccgcg cccgcgtaga ccacgttcgc gttggtcggg tcggcaccca gcgtggtgta
     6241 gtagaaggga cgctggatca gggagccctg cgagttcacc aggctccagc tctgtcccgc
     6301 gtcgtccgag cgatacagcc cgccacccgg cttcgcctcg atcagcgcgt agattcggct
     6361 gggattggcc gcggtcaccg cgaggttcgc tttgccgatc agctgattgg gcagtcccgc
     6421 cgccaggtgc gaccaggtct ccccgccgtc gctgctcttg tagaagccgc cctcgcgcga
     6481 gccgctgatg atggtccagg gcttccgctc gatgcgggac atccaggcgt acaccaccag
     6541 cgggtttccc ggctggagct cgacgtctat ggcgccggtg ctgtcggaga cgtagagcgt
     6601 cttcttccag ctcttgcctc catcggtcgt cttgaacacg ccccgctctg cgttgggctt
     6661 gaagaggtcg ccgtaggcgg cgacccacac ggtgttcgga tcggtcggat ggatgcgcac
     6721 cgcgccgatc tggccggcgt tgtagagccc gctgaaagac cagctggttc cgccgtcgct
     6781 gcttttgtac acgccgcgcc cggtggagac gttgctgcgc acgccgtccg atcccgtgcc
     6841 gaagtagatg atgtcgggat tcgactcggc cacggcgatc gagccgctcg agccgagcgg
     6901 taccttcccg tcggtgaggg gcacccagcc ctccccgccg tcggtgctgc ggaagatgcc
     6961 gccgctcgcg acgcccatgt agaaggtccg gggttgcgaa gggactcccg tcaccgtggt
     7021 cacccggccc ccgcgagagg ggccgaccag ccggtagctc atccctcgaa acagtgcgct
     7081 gtccacctgt gcgattgccg gaggcgggct gctcgcggcg agtgctagag ctgtaagtac
     7141 cacctggcgg gccatctttg ctcctcgact tctcgggaaa ggatatg
//
LOCUS       DASYRV010000053         4918 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1050114, whole genome shotgun sequence.
ACCESSION   DASYRV010000053 DASYRV010000000
VERSION     DASYRV010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4918
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1050114"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..475
                     /locus_tag="VGQ24_01120"
     CDS             <1..475
                     /locus_tag="VGQ24_01120"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEV8453457.1"
                     /translation="GDAPEWLDRAPTGAVASFAGVGNPHERSNLQPGEAVLDLGSGAG
                     LDAMIAAWRVGPTGRVVGVDLNPAMCVKAQAHVAATGTRMECREGPMEDIPLPNASVD
                     VVISNGVINLSFRKRRVVEEMFRVLRPGGRISITDIVSAKQLSQSIVNDPKLWAS"
     gene            503..655
                     /locus_tag="VGQ24_01125"
     CDS             503..655
                     /locus_tag="VGQ24_01125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453458.1"
                     /translation="MFRLLEETGFTRVRSAVVPGFRFRKESTQDAAEAYGVKAVMMTA
                     LKPGSG"
     gene            complement(691..969)
                     /locus_tag="VGQ24_01130"
     CDS             complement(691..969)
                     /locus_tag="VGQ24_01130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453459.1"
                     /translation="MIRRTLGIASAIIASLVITACSDMTGPTEMQSSGLVGRASLAEG
                     SRTCPAPGTGLPGALNMLLDPTMFTIPMVHDAAQGNTGMFHAVDVSGC"
     gene            1099..3990
                     /locus_tag="VGQ24_01135"
     CDS             1099..3990
                     /locus_tag="VGQ24_01135"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HEV8453460.1"
                     /translation="MLHLKAFGGLSVDIDGIPGTGAAQQRKTLALLALLAAARQRGLS
                     RDKLIASLWPETDAERGRGLLNQACYTLRRDLHTPDLFLGSIQLRLNPAVISSDVESF
                     ARALEEHDPARAVAFYTAPFLDGFYLNGGGEFETWAETERARLASQCRAALEALSQEA
                     TGRGEHRLAAEWGGRLLALDPLSSHAALGLMTALDHAGEPAEALRCGEAYGELVRSEL
                     GTDPPPELSQWIEQHRHVAGNGAPEARLSTAALQRALALELPSPVIPVTLTGKAKHLR
                     RNGALALMGLILVGAATIWSLRPSPIVSRASLSPTTIAVLPFAYRGNPEFTYLAEGMV
                     DLLGADLSGAGEIRTIDPHAVLARTRYPDGKWSPQQAGKISAQLGAGSYVLGDITEAG
                     GRLRISARLYRVGSEDEAREVAAVDGAAAQLFRLVDALTIQLLKTRGRDPGLPQVNLA
                     ALTTDSLAALKAYLEGERALRAWCTDSAVGVFQRATEIDPSFALAYYRLAIAAQEKPA
                     LARKALNQALRYSARLGDHERKLVHALDAFNRGHQKDAERLYRELVTRYPNDFEAWSQ
                     WGDVLMHGGSRLGRSWFDARQPFERVLSMEPRDPHALWNLSNIAARQRRVGELDSLTR
                     RILQGNPGPLEAAAVRAQRAIVVGDTAELARFMAQMRRASDNLAQPTVGFLTFTTGDL
                     EAGRRLWGLITDPSRARATRMLAYKTLAQIELMSGRWRAAQARLDTMAGLDPATALEH
                     RALFALWPLQQVSRIDLEALRDSLVRWKASPGPTNETLLSAELGPAHPYLRLYLLGLF
                     AARLGEPSAALRYAAELKRRSRFAFAPDFVADLGRSVAAEVARLGGQTQVALQLLDQG
                     SFWTRTDVQPTGASPFYVHEYERFIRAELLNALGRSNEALMSYVQLADVLFHSGAPAH
                     LRLAQIYDHQGDRRRALDHYRRFIALWKDCDPQLRPLVVAAQQRVNAVN"
     gene            complement(4130..4801)
                     /locus_tag="VGQ24_01140"
     CDS             complement(4130..4801)
                     /locus_tag="VGQ24_01140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453461.1"
                     /translation="MGARALEFSRDHPDASPGYAAALARLEDRLVRADQLEAQQREGI
                     LLARAANARKKELRRALKLGLLGHLASVADAASAEAPELPQKFTLPKTTQSFRAFRAA
                     ARGIEAEAQSRKELLVKHGLSETGLQALTESLNEFDAVVKQGSDSRVAHVGASFELDD
                     VADEVVQVVKVMNGLNHFRFARDGELLASWAAASNVVATPHPADQKAGPEVRPPAAGD
                     VRPAA"
BASE COUNT          823 a         1633 c         1608 g          854 t
ORIGIN      
        1 cggcgatgcg cccgaatggc tcgaccgggc accgaccggg gcggtcgcct cgttcgcagg
       61 agtaggcaac ccgcacgagc ggagcaatct gcagccgggt gaggccgtgc tcgacctggg
      121 cagtggcgcc ggcctggacg caatgatcgc cgcttggcgg gtgggtccaa cgggtcgcgt
      181 ggtgggcgtc gatctgaacc ccgcgatgtg cgtcaaggcc caggctcacg tcgcggcaac
      241 ggggacacgg atggaatgtc gcgaagggcc catggaggat atcccgctcc ccaatgcctc
      301 ggtggacgtg gtgatctcca atggggtgat caatctctcc ttccgcaagc gccgcgtagt
      361 cgaggagatg ttccgggtgc tgaggccggg cggtcggatt tcgatcaccg acatcgtgag
      421 tgccaagcag ctgtcccagt caatcgtgaa cgatcccaaa ctctgggcca gctgaattgg
      481 tggcgctctc ccggagggag agatgtttcg gttgctggag gaaaccggct ttacccgcgt
      541 gcgctcggcc gtcgtgccgg ggttccggtt ccgcaaggag tcgacccagg atgcagccga
      601 ggcctatggc gtcaaggccg tcatgatgac tgcactgaag ccaggctcgg gttgagggac
      661 tggatgacgg tctgtcctcg aagcagacgg tcaacagcct gagacgtcta ccgcgtggaa
      721 cataccggtg tttccctgag ccgcgtcgtg gaccatcgga atggtgaaca tagtgggatc
      781 aagcaacatg ttgagagctc ccggcaaccc ggtgcctggg gcggggcacg ttctcgaccc
      841 ctccgcgagc gaggctctcc ccacgagtcc cgaggattgc atctcggtcg gacccgtcat
      901 gtccgagcag gcggtaatga cgagagaggc gatgatggcg ctggcgatgc ctagtgtgcg
      961 tcggatcatg ggagaatctc ctgaattgag ggatggcggg tcgggggaat cccggctgga
     1021 ttcgctactt cacggtacgg gcgataagtt agaggcacct gctcaaaagc cactcaaagg
     1081 ccagtcaaac ggggcaacat gctccacctc aaggcgttcg gtgggctctc cgtagacatc
     1141 gacggcatac ctggaaccgg cgcggcacag caaagaaaga cgctggcgct cctcgccctc
     1201 ctggcggccg cccgccagcg cgggcttagc cgcgacaaac tgatcgcctc cctgtggccc
     1261 gaaaccgacg cggagcgcgg ccgcggactc ctcaaccagg cctgctatac cctccgccgc
     1321 gatctccaca cgcctgacct gtttctggga tcgatccagc tccgcctgaa tcccgccgtg
     1381 atctcgagcg acgtggaatc gttcgctcgc gcgcttgagg agcacgatcc ggccagagcg
     1441 gtcgcgttct acaccgcacc atttctggac ggcttctatc tgaatggggg cggggagttc
     1501 gagacctggg cggagaccga gcgagcccgg ctggcgagcc aatgccgggc cgcgttggag
     1561 gcactgtctc aggaggccac cggacgcggc gagcatcggc tggcggcgga gtggggagga
     1621 cgcctcctcg ccctcgaccc gctgagctcc cacgccgcgc tcggcctcat gaccgccctg
     1681 gaccatgccg gcgagcccgc cgaggcgcta cgctgtggag aggcgtacgg ggagctggtg
     1741 cgttcggagc tcggcaccga tccaccgccg gagttgtccc agtggatcga acagcaccgc
     1801 catgtagctg gcaacggtgc acccgaggcg cggctgtcga ccgcggcgct gcagagggcc
     1861 ctggccctgg aactcccgtc acctgtgatt ccagtcactc taacgggcaa agcaaagcat
     1921 ctccgccgga acggagctct tgccctgatg gggttgatcc tggtcggtgc cgccacgatc
     1981 tggagcctgc ggccctcccc gattgtctcc agggcatccc tctcccctac caccatcgcc
     2041 gttctcccct ttgcctatcg gggcaacccg gagttcacct atctggctga gggcatggtg
     2101 gatctccttg gcgcggacct cagcggggcc ggggagatcc gcacgatcga tccccatgcc
     2161 gtactcgctc gaacgaggta ccccgatggc aagtggagtc cccagcaggc gggcaagatc
     2221 tcggcgcaac tgggcgcagg gtcctacgtg ctgggtgaca taaccgaggc cggaggccgc
     2281 cttcgaatca gcgcgcggct ctatcgtgtt ggatcggagg acgaggctcg agaagtggcg
     2341 gccgtggatg gcgcggcggc gcagctgttc cggctggtcg atgccctcac gattcagctg
     2401 ctcaagaccc gcggccgaga tcccggactg ccgcaggtga acctcgcggc gctcaccacc
     2461 gactcgctgg ccgccttgaa ggcgtatctg gagggcgagc gcgcccttcg ggcatggtgc
     2521 accgactcgg cggtcggggt ctttcagcgc gcaaccgaga tcgacccatc gtttgccctc
     2581 gcctactacc gccttgccat tgccgcgcag gaaaagccgg cgctggctcg caaggcgcta
     2641 aaccaggctt tacggtacag cgcgcgactc ggtgatcacg aacggaagct ggtgcacgcg
     2701 ctcgacgcat tcaatcgcgg ccatcaaaag gatgccgagc gactctaccg cgagctcgtg
     2761 acccggtatc ccaatgattt cgaggcgtgg agtcaatggg gcgatgtgct catgcacggc
     2821 gggagccggc ttggccgctc gtggttcgac gcgcggcagc ctttcgagcg agtgctttcg
     2881 atggagccgc gggatccgca cgcgctttgg aacctcagca acattgcggc gaggcagcgc
     2941 agggtaggcg agctcgattc cttgacccgg cgaatccttc aaggaaatcc gggcccgctc
     3001 gaagcagcgg cggtgcgggc gcaacgggcg attgtcgttg gcgatacggc ggagctggcg
     3061 cggttcatgg cgcaaatgcg gagggccagc gacaatctgg cccagccgac ggtaggcttc
     3121 ctgaccttta ctacagggga cctcgaggcc ggccgccgtc tctgggggct gatcaccgat
     3181 ccatcccggg cgcgcgcgac cagaatgctg gcatacaaga cgctcgccca gatcgagctc
     3241 atgagcggcc ggtggcgcgc cgcacaggcc cggctcgaca cgatggccgg gttggaccca
     3301 gctacggctc tggagcaccg ggcgctattc gccttgtggc ctctccaaca ggtgtcccgc
     3361 attgatctgg aggccctccg ggattccctg gtgcggtgga aggcctcacc cggtccgacg
     3421 aacgaaacct tgctgagtgc cgagctaggt cccgctcatc cctatctgcg gctgtatctc
     3481 ctgggactct tcgctgcccg gctgggcgaa ccctccgccg cgttgcgcta cgccgctgaa
     3541 ttgaagcggc ggtcccgttt cgcgttcgca ccggatttcg tggccgacct gggccgaagt
     3601 gttgccgccg aagtggcccg gctcggcgga cagacacaag tggcgcttca gctgctggac
     3661 cagggcagct tctggacccg gaccgacgtg cagccaaccg gcgcctcgcc gttctatgtc
     3721 catgaatacg agcgcttcat ccgtgccgag ctgctgaatg cactcggccg ctccaatgaa
     3781 gcactgatgt cgtatgtgca gctagccgac gttctctttc attccggcgc tcccgctcat
     3841 ctccgcctgg cacagattta cgaccatcag ggcgatcgtc gcagagcact ggatcactac
     3901 cgccgcttca tcgcgctgtg gaaggactgc gacccacagt tgaggccctt ggtcgtggcc
     3961 gcccagcagc gcgtgaacgc ggtcaattga ggtaccgtgg tgatccgatg ggctgaccct
     4021 atgaccgtat cccggtagag ccgagcagcg aggaccagta cgctaaaccg ccgccgagag
     4081 tttacgactc caggcggcgg ttagctttct tgcaccaaca cgttcgacct catgccgcgg
     4141 gcctcacatc acccgcagcc ggtggcctca cctcgggacc agccttctgg tccgccgggt
     4201 gcggcgtcgc caccacgttg ctcgccgccg cccacgatgc cagcagctca ccgtcccggg
     4261 cgaagcgaaa gtggttgagg ccgttcatca ccttcactac ctggaccacc tcgtcggcca
     4321 cgtcatccag ctcgaagctc gcacccacat gggcgacgcg gctgtccgag ccctgcttga
     4381 ccacggcgtc gaactcgttc agcgactcgg tgagcgcctg aagccccgtc tccgagagcc
     4441 cgtgcttcac cagcagctcc ttccggctct gggcctccgc ctcgatcccg cgagccgccg
     4501 cccgaaacgc ccggaacgac tgggtggtct tcggcagcgt gaacttctgc ggcagctccg
     4561 gcgcttccgc cgatgcggca tcggcgacgc tggcgaggtg cccgaggaga cccagcttca
     4621 gggcccggcg caactccttc ttccgcgcgt tggccgcacg ggcgagcaga atcccctccc
     4681 gctgctgcgc ctcgagctgg tccgccctga ccaggcggtc ctccagccga gccagcgctg
     4741 cggcgtatcc ggggctcgcg tccgggtgat cgcggctgaa ctccagcgca cgcgcaccca
     4801 tctccagttt cctacgtgcc ttggcattca tagagctacc ctcgtgttgg ccgacggctg
     4861 tcgggcgcca ccggcaattg gttgagactg ccgctagagt ccgagtggcc cgacgcat
//
LOCUS       DASYRV010000054         2456 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3553559, whole genome shotgun sequence.
ACCESSION   DASYRV010000054 DASYRV010000000
VERSION     DASYRV010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2456
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3553559"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            354..821
                     /locus_tag="VGQ24_01145"
     CDS             354..821
                     /locus_tag="VGQ24_01145"
                     /inference="COORDINATES: protein motif:HMM:NF015999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaK/EbsC family protein"
                     /protein_id="HEV8453462.1"
                     /translation="MPAQMLKEFLDAQGVEYVVITHSPAFTAQKIAASAHIRGKELAK
                     TLIVKIDGRMAMAVLPASQKADLKLLCETAHAQNVELASESEFRDRFPGCAPGAMPPF
                     GNLYGMDVYVAASLAEDEEIAFNAGSFTELVRMAYRDFERLVQPKVLSFAVGV"
     gene            896..>2456
                     /locus_tag="VGQ24_01150"
     CDS             896..>2456
                     /locus_tag="VGQ24_01150"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEV8453463.1"
                     /translation="MSDALSRLQAALADHYRIERELGRGGMAIVYLAHDLRHDRPVAL
                     KVLHPELAETIGTERFLREIKLAARLQHPHIISVHDSGDAGTGGSGAGRLWFTMPYIE
                     GESLRERLHREHQLPVDEAVRITREVALALDFAHRHGIVHRDIKPENILLVDGQALVA
                     DFGIGRALGVSGEAGRRGGRGSGEEQLTGTGMAIGTPAYMSPEQAVGERDLDGRTDVY
                     SLGVVLYEMLAGELPFSGPTAQAIAAKRMTGEVPSLRRLRPAVPEQLERVVLTALAPI
                     PADRFSTPAQFAQALSPVTPTTPTAAAMPAQPALSTGVSKLVRRLPAVPAWLTFVLGL
                     LVTATMGMLLLQRNRRPAEEPGVKMLAVLPFKNMGAAGDQYFADGLTEEITSRLSAVP
                     KVGVVSRTSADQYKGTTKSLKQIGQELGVGYILEGSVRWEKSPDGKTSRVRVTPQLIR
                     VSDDRHLWAERYDAELADVFQVQSGIAERVIGSMGVTLNPPQQRALQDRPTSNSDAYD
                     LYLRGNDYFNRG"
BASE COUNT          414 a          829 c          808 g          405 t
ORIGIN      
        1 ggtaaggcgg taaggcggta aggcggaagt tacctagact tgtcaccctg agccgtagcg
       61 cagcggaggc gagggggccg aaaccctacg ggcctgctgc accaatcagc tattccgaac
      121 ccttctagct tcggccccct ccccgctcgc tacgctcggg gtcagggtga caacctaccg
      181 ccgtaccgac gcagtatcta ccgccgcttt atctaccgcc gctccatcta ccgccgcagt
      241 atctaccgcc gcagtatcta ccgccctacc gccccttcgc tctgctcagg gccggtggcg
      301 tccccgggta ccgtaggaca gattccactc gggcctcatc acagggaggc gttatgccgg
      361 cccagatgct caaggagttc ctcgacgccc agggcgtcga gtacgtcgtt atcacccact
      421 cgcccgcctt caccgcccaa aagatcgccg cgtcggctca catccggggc aaggagctcg
      481 ccaagacgct gatcgtgaag atcgacggcc gcatggcgat ggcggtcctt cccgcctcgc
      541 agaaggccga cctgaagctt ctgtgcgaga ctgcccacgc gcagaacgtg gagttggcca
      601 gcgagagcga gttccgggat cgctttccgg gctgcgcccc gggcgccatg ccgccgttcg
      661 gcaatctcta cgggatggat gtctacgtcg ccgccagcct cgcggaggac gaggagatcg
      721 cgttcaacgc gggctcgttc accgagctcg tgcggatggc ctatcgcgat ttcgagcggc
      781 tggtgcagcc gaaggtgctg agcttcgcgg tcggcgtctg acctcgtcgc cggggtggac
      841 ttccggctgc tggtgatgcc gccgaggatc aatctagcct ctcgccagga cgatcttgtc
      901 tgatgctctg agtcgcctcc aggctgctct tgccgaccac taccgcatcg agcgcgagct
      961 cggacgcggc ggcatggcca tcgtctacct ggcccacgac ctccgccacg accggccggt
     1021 cgccctcaag gtgctccacc cggagctggc cgagaccatc ggcaccgaac gcttcctccg
     1081 cgagatcaag ctcgccgccc gtctccagca ccctcacatc atctcggttc acgacagcgg
     1141 cgacgcgggg acggggggaa gcggggcagg acgactttgg ttcacgatgc cctacatcga
     1201 gggcgagagc ctgcgcgagc gactccatcg ggagcaccag cttccggtgg acgaggcggt
     1261 tcggatcacc cgggaagtgg ccctcgcgct cgacttcgcc catcggcatg ggatcgtcca
     1321 ccgcgacatc aagccggaga acatcctgct ggtggatggt caggccctcg tggccgactt
     1381 cggcatcgga agggccctgg gggtcagcgg ggaagcgggg aggcggggag gcaggggaag
     1441 cggggaagag cagctgactg ggaccgggat ggccatcggg accccggcgt acatgagccc
     1501 ggagcaggcc gtgggcgagc gcgacctcga cggccgaacc gatgtgtaca gcctcggcgt
     1561 ggtgctgtat gagatgctgg cgggcgagct gccgttcagc ggtcccacgg cccaggccat
     1621 cgccgcgaag cggatgactg gcgaagtccc cagcctccgt cgccttcggc cggcggttcc
     1681 ggagcagctc gaacgggtgg tactcactgc cttggcgcct atcccagcgg atcggttcag
     1741 cacgccggcc cagttcgccc aggcgctgtc acccgtcacg cccacaactc ccacggccgc
     1801 cgcgatgccc gcccagccgg cgctatcgac gggcgtctcg aagctagttc gccggctacc
     1861 ggccgttccc gcctggctca ccttcgtgct cggcctcctg gtcacggcaa ccatggggat
     1921 gttgctgttg cagcggaacc ggcggccggc ggaggaaccc ggggtcaaga tgctggcggt
     1981 gcttccgttc aagaacatgg gcgcggccgg cgatcagtac ttcgccgatg gcctcacgga
     2041 agagatcacc agccgccttt cggcggttcc caaggtgggt gtcgtctcga ggaccagcgc
     2101 cgaccagtac aagggtacga ccaagagctt gaaacagatc ggccaggagc tgggcgttgg
     2161 ttacatcctc gagggaagcg tccgctggga gaagtcaccg gacggcaaga ccagccgagt
     2221 gcgggtcacc cctcagctga tccgggtctc ggatgaccgg cacctctggg ccgagcgtta
     2281 cgacgcggag ctggccgacg tctttcaggt gcagtccggg atcgcggaac gggtgatcgg
     2341 ctccatgggt gttaccctca acccgccgca gcagcgggcg ctgcaggatc gacccacctc
     2401 gaattcggat gcgtacgacc tctatctccg gggcaatgac tacttcaatc gcggca
//
LOCUS       DASYRV010000055         2777 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2101436, whole genome shotgun sequence.
ACCESSION   DASYRV010000055 DASYRV010000000
VERSION     DASYRV010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2777
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2101436"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1427
                     /locus_tag="VGQ24_01155"
     CDS             <1..1427
                     /locus_tag="VGQ24_01155"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEV8453464.1"
                     /translation="LIGIVILVSSLLSGLIERTGVPQVALFLLLGLVLGPAGLNLVNL
                     TLQSPTLQWITTLALVLVLFTDAIAMDFSQFRRPRRVLLVILIPATLIPAVLIGLLAR
                     FLLGLDWLPSAILGAALASTDPVMLRTLIRRSSVPARVREALRLEGGINDVVLLPVIV
                     LSILALTGRGGAADLGRHAVGLFLLGPGLGALIGFVAITLLEQVRKRVGVRRDYESLY
                     ALGVAFTAYAAAESVGGSGFLAAFAAGVVIAKLDVELCDCFLDYGQATAEMFLLFTFV
                     AFGAWLIWSGFGVADGRTLLFALLALAMRTVVLLPVLSREGIDPRNRRIIAWFGGPRG
                     LSSLLLILLPVFAGVQGSEQLFAITCLVVLLSVVIHGTGIAVYLRKTEGPIPDDLDVS
                     DATAAKKPDPGAKVPERITLEELRRLREAGEPVILADVRKDRSYTADNLKAAGAIRLP
                     PDDAVRGARELGLDHHGTVVLYCT"
     gene            1743..>2777
                     /locus_tag="VGQ24_01160"
     CDS             1743..>2777
                     /locus_tag="VGQ24_01160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453465.1"
                     /translation="MLVLQFAKRSVLTLAAAAVALSGCGSESAPTVPFNPSGATADIE
                     AVNSTFASSAFSDFSALSVLFDAALGGAPLVSASAAALDLRGGGTAKGIQAAAARSAE
                     RIARIVPRPAGAGFSASSAAIPPEFLGKTFVYSGGSYVVSAQTGAPANGVRFRLYAID
                     PVTLLPVEPLNQTGYVDLIDLSSGTTSSARVIVVSGTTTYLDYRVSATSTATEGRVTV
                     LGFITDGATDATFNLRATLTADAGLTLSYSLDVPQRDLSLDLTMSVDGTEISTINVTL
                     DMRGQNGWVRLTGQFTADGGTLNIAINGTPFATITSTAGAEPVITGADGQPLAQDELD
                     ALQRVFEFSGS"
BASE COUNT          379 a          977 c          954 g          467 t
ORIGIN      
        1 cgctgatcgg cattgtcatc ctggtctcgt cgctcctgtc cgggctgatc gagcgcaccg
       61 gcgtccccca ggtcgccctc ttcctgctgc tcggcctggt gctcgggccc gccggactca
      121 acctcgtcaa cctcacgctc cagtcgccca ccctccagtg gatcaccacc ctggccctgg
      181 tgctggtgct cttcaccgac gccatcgcca tggacttcag ccagttccgg cgaccgcggc
      241 gggtgctgct ggtgatcctg ataccggcca ctctgatccc ggcggtgctc atcgggctgc
      301 tcgcccggtt cctgctcggc ctggactggc ttccctcagc gatcctcggc gcggcgctgg
      361 cctcgaccga tccggtgatg ctgcggaccc tgatccggag gtccagcgtt cccgcgcggg
      421 tccgcgaggc actccggctg gagggcggca tcaacgacgt ggtgctgctg ccggtcatcg
      481 tgctgagcat cctcgcgctg accgggcgcg gtggcgcggc cgacctgggc cggcatgcgg
      541 tgggactctt cctgctcggc cccggactcg gcgcgctcat cggcttcgtc gccatcactc
      601 tgctggagca ggtgcggaag cgggtcgggg tgaggcggga ctacgaatcg ctgtacgcgc
      661 tcggggtcgc cttcaccgcg tatgccgcgg ccgagtcggt cggcggcagc ggcttcctgg
      721 ccgcgtttgc cgcgggggtg gtcatcgcca agctggacgt cgagctgtgc gactgcttcc
      781 tcgactacgg ccaggccacc gccgagatgt tcctgctgtt caccttcgtg gcgttcgggg
      841 cctggctcat ctggagcggc ttcggcgtgg cggacggccg gacactcctg ttcgccctgc
      901 tggcgctggc gatgcggacg gtggtgctgc tgccggtgct gtccagggag gggatcgacc
      961 cgcgcaaccg gcgcatcatc gcctggttcg gaggtccccg aggtctgagc tcgctgctgc
     1021 tcatcctgct gccggtgttc gcgggagttc agggaagcga acagctcttc gccatcacct
     1081 gcctcgtggt cctgctctcc gtcgtcatcc acggtaccgg gatcgcggtg tacctcagga
     1141 agacagaagg gccgatcccc gatgacctcg acgtcagcga cgccacggcc gccaagaagc
     1201 ctgatcctgg ggctaaggtc cccgagcgga tcacgctgga ggagctgcgc cgcctccgcg
     1261 aggcggggga gccggtgatc ctggccgacg tgaggaagga ccggagctac accgcggaca
     1321 atctcaaggc cgcaggcgcc atccggctcc cgccggacga cgcggtgcgc ggcgcccgcg
     1381 agctggggct cgatcatcac gggacggtgg tgctgtactg tacctgaaag gatgaagcga
     1441 caagcgcccg ggtggcgcga gagctccgat cggcaggctg gcccaaggcc cgcgcgctgg
     1501 taggtggctg ggccgcctgg caggaggcag gcctgccggt cgaggcgagg agctagctcc
     1561 tcgctcctag ctgcaactcc tggcatagcc gttgcctgtt cccgccccta gtcgggccgg
     1621 ccaccagccg gcggcccgcg gtcattcccc aaaagcgttc agagcccaca gataagggcc
     1681 ttccaccggc ggccgcacga ccgggccgcc gccaactgct cccggagatg gaggcggaac
     1741 ccatgctcgt cctgcaattc gccaagcgct cggtcctgac actggcggcc gcggccgtgg
     1801 ccctgagcgg ctgcggctcg gagtcggcgc ccacggtgcc gttcaacccg tccggcgcca
     1861 ccgccgatat cgaggcggtg aacagcacgt tcgcctcgtc ggcgttcagc gacttctctg
     1921 ctctcagcgt gctgttcgac gcggcactcg gcggcgcgcc gctggtgtcg gcctcggcgg
     1981 cggcgctgga cctccgtgga ggcggtaccg ccaaaggaat ccaggcggcg gcggcgcgga
     2041 gcgccgagcg gatcgcgcgc atcgtgcccc gtcccgccgg cgcaggattc agcgcctcca
     2101 gcgcggcgat ccctcccgaa tttctgggga agacgttcgt ctatagcggc ggcagctacg
     2161 tggtctcggc ccagacgggc gcgccggcca acggcgtgcg tttccgcttg tacgcgatcg
     2221 atccggtgac cctccttccg gtcgagccgc tcaaccagac cgggtacgtg gacctgattg
     2281 acctgagctc gggcacgacc agctccgcgc gggtgatcgt ggtctcgggc acgacgacct
     2341 acctcgatta tcgggtgagc gccaccagca ccgccacgga gggccgggtg acggtgctcg
     2401 ggttcatcac cgatggggcc accgacgcga cgttcaacct ccgcgccacc ctgacggccg
     2461 atgccgggct gacgctgagc tactcgctgg atgtgccgca gcgcgacctc tcgctcgatc
     2521 tcaccatgag cgtcgacggc acggagatca gcaccatcaa cgtgaccctg gacatgcggg
     2581 ggcagaatgg gtgggtccgg ttgaccggcc agttcaccgc cgatggcggt accctcaata
     2641 tcgcgatcaa cggcacaccg ttcgcgacca tcacctccac ggcgggtgcc gagccggtga
     2701 tcaccggtgc ggatggccag ccgctcgcgc aggacgagct cgacgcgctt cagcgggtgt
     2761 tcgagttctc cggcagc
//
LOCUS       DASYRV010000056         9558 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1050786, whole genome shotgun sequence.
ACCESSION   DASYRV010000056 DASYRV010000000
VERSION     DASYRV010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9558
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1050786"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..537)
                     /locus_tag="VGQ24_01165"
     CDS             complement(<1..537)
                     /locus_tag="VGQ24_01165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453466.1"
                     /translation="MTTIRRRLTVWYTVALAVTVLAFGTALYVERRQASVRELDQRLS
                     LESDLAHRWLTQSYKVLGRIVTNSGPRPSLDPAISAYLEAARDYLVVADTAGQVLALS
                     DVTRSLNAEALERLTAPLHTPHLTRHGGVLALGSPTGKVRYLVVPVDGAGPSVGGLLV
                     ATPTRQASFGPTDLLRSML"
     gene            complement(539..1207)
                     /locus_tag="VGQ24_01170"
     CDS             complement(539..1207)
                     /locus_tag="VGQ24_01170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEV8453467.1"
                     /translation="MKILVVEDDRTVGQYVKRGLEEQRYHADLVDDGMEGLRLASGGR
                     YDLIVLDLRLPEMNGLEVLRTLRDRGNTTPVLVLTAQDAVDFKVQALRSGADDYVTKP
                     FAFEELLARVEALGRRPKEIRTPVLRVGDLELDMATREVRRAGERIELTPKEYTVLEY
                     LMRHAGRVMSRTLITEYAWDYHFDPGTNIVDVVINRLRKKVDSGHTQRLVHTVRGVGY
                     VVKA"
     gene            complement(1204..2700)
                     /locus_tag="VGQ24_01175"
     CDS             complement(1204..2700)
                     /locus_tag="VGQ24_01175"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEV8453468.1"
                     /translation="MELVGIVARLLNDGLEADETLMAVAESLRTGLHVEGVGIWFRDA
                     ATGCFRVVSAPPASGPPLLADSLQAIPDGGPGARLPLEHEEACIGLLELRPEPDPDAR
                     DVVVVVADLLATFLASLALSADFAVEVAAQSREIDEQRRFTSLIIDSLPVGLYVVDRE
                     YRIQIWNRQREIGAPGLRRDEVVGRPVFEVLTRQPAEELRADFDRVFQTGQIQQAELD
                     VTLGGEVRSFRLSKIPMRLEGDAISHVITIGEDVTESRRTQGQIMQSEKLAAIGQLAA
                     GVMHEINNPLATISACVAAITGRLEDLDRREKAAVEEYLEIIDKEVDRCTRIVDGLLD
                     FSRPKGKTKAQVMLNALVDETLFLLKHHQRFKRMTVSRQLDPALPTTTGNTEQLTQVL
                     MALMLNAVDAMDDRGRLTVRTGRSPHHSDEVVLEIEDNGIGIPRADQSKIFEPFYTTK
                     PPGRGTGLGLSICYGIVEEHRGRIEVDSQPGRGSIFRVYLPAHNTSSR"
     gene            complement(2715..3221)
                     /locus_tag="VGQ24_01180"
     CDS             complement(2715..3221)
                     /locus_tag="VGQ24_01180"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEV8453469.1"
                     /translation="MSRLRLAALCVGILVAGGCRIEDHTPTGTRRDEDRIQHLISGYA
                     RSLSARDWTGVRSLFWQDGTYAGPLGPGAPTNYHQAVSIDAALRVLDRWLQGAERRNF
                     DVRVLRTDLRQEGDLAAAWVVTRRRTPSGSTSTERDWVEHVVLRRIDGDWRILSVAAV
                     SAPRGSVR"
     gene            complement(3277..3909)
                     /locus_tag="VGQ24_01185"
     CDS             complement(3277..3909)
                     /locus_tag="VGQ24_01185"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013352894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEV8453470.1"
                     /translation="MPFTLPPLPYDYTALEPHIDEQTMRIHHDKHHAAYVNNLNAALE
                     AQPDLQKKSIEELLGNLNQVPEAIRTKVRNNGGGHANHTIFWEMMAPGGAKEPGGALA
                     EAITRAFGNFATFKEQFAKACVERFGSGWGWLTVDRSGKLVIESTPNQDTPVMEGKTP
                     VLGCDVWEHAYYLKYQNRRPDYVTAWWSVVNWTVIAKRFEKARGLEKAMR"
     gene            3997..4863
                     /locus_tag="VGQ24_01190"
     CDS             3997..4863
                     /locus_tag="VGQ24_01190"
                     /inference="COORDINATES: protein motif:HMM:TIGR03083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maleylpyruvate isomerase N-terminal
                     domain-containing protein"
                     /protein_id="HEV8453471.1"
                     /translation="MAAGGPQRSSVQAVEPIYLIERFPGLHQELMSLLRGLDEADWSR
                     PTACALWSVKDIVAHLLDTGLRRLSSGRDGFMPAPEAGIASYTDLVAYLNRLNAEWVG
                     ATRRLSPRVLMELMDVTAPQVHAFFGSLDPHARALFGVAWAGEESSPVWFDIGREYTE
                     RWLHQQQIREAVAAPGLLGREWLYPALDIFMRALPHTYRAVPAEPGQSIHFAIRGEAG
                     GNWTLRRQSQGWSLFTGRDDHPATRVSLDQETAWKIFSKGLSPEGARRSVRIEGDSRL
                     GEPVFGALAVMA"
     gene            5145..6200
                     /locus_tag="VGQ24_01195"
     CDS             5145..6200
                     /locus_tag="VGQ24_01195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEV8453472.1"
                     /translation="MSEARAKRGQLTKRKSWRPARELAVDLGTANTLVFVKGEGVVLN
                     EPSVAAVDQATGKILGIGLEAKRMLGRTPEGVLAVRPMKDGVIADFHIAEKMLRHFIR
                     LVIDRTFLRVKPTVIVCVPSGITEVERRAVRDSAQSAGVKRLYMVAEPMAAAIGVGLP
                     VDTPVGSTVIDIGGGTTNIAVIALSGIVCDASIRTGGDELDQAIVQFMRKTYSLLIGE
                     PTAERIKIGLGSAVQLEREGEMDVKGRDLVSGLPKTIRIDSRGVREAIEEPVSHIVNA
                     VRRALEMTPPELASDVLEYGIMLTGGGSLIRGLDQRLMDETGLPVRVDEDPLTSVVRG
                     TGRILDEFARYNTVLST"
     gene            6336..7145
                     /locus_tag="VGQ24_01200"
     CDS             6336..7145
                     /locus_tag="VGQ24_01200"
                     /inference="COORDINATES: protein motif:HMM:NF018436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1206 domain-containing protein"
                     /protein_id="HEV8453473.1"
                     /translation="MTAPTVHQVAPWVERLARIGYAAKGILYITVGLLAAQAGLGRGG
                     RTVDTQGALRVVHTITFGRIALLVIAAGLMGYAIWRIVEAVVDPDGRGTDAKGLALRA
                     SFAARGVLYGALGITALRLAARERPGSHSEQTRHWTELAFGLPAGELLVWLAASGIGG
                     YGIYQLYRAYASKLSRQLHLGELGTGTLRWIVGVSRFGIAARGVVFCLIGFFLAGAAA
                     RHDATQAGGLRKSMGVLAGIGLWPIVVVALGLVAYGVYELVNARYRRISVG"
     gene            7233..7664
                     /locus_tag="VGQ24_01205"
     CDS             7233..7664
                     /locus_tag="VGQ24_01205"
                     /inference="COORDINATES: protein motif:HMM:NF037170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEV8453474.1"
                     /translation="MPAKADSQSQPRRQQPESLRLRSISPTLTVNDVQRSVAWYRDGL
                     GFFVSERWEEGGRLQGVMLKAGACHLGLSQADFSKGRDRVKGVGFRIWGDTTQNVDAI
                     AERLRAFGGTIVEEPGNHWDTYSFTAQDPDGFKITITATRP"
     gene            complement(7718..9415)
                     /locus_tag="VGQ24_01210"
     CDS             complement(7718..9415)
                     /locus_tag="VGQ24_01210"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEV8453475.1"
                     /translation="MFRPSLTVWPCVIALLGTVGCRQSADRISHEIRNITSAERPPAY
                     LEGVRWKLVRQIYEDRQYRPLWVGIRPMPERTKDLIANLCDAEREGLRPADYRLGEFR
                     RTLERLRPSLNKQRPEAFAVLDLELTRRFLDYGADLLAGRLDPKAVASGWYIRARRSS
                     IEGTLRGAAQAEAFQGIVAPLRPNLPGYAELVKALAGYREILGHGGWPQVPGRSRLRR
                     GDRGARVAVLRRRLRITGDLRSSAGSKPVYNRAVAKAVARFQSRHGIPSDGIVGAATL
                     AALNVPVQVRIRQIQLNLERYRWLPAEFGPRYIYVNIPDYELYGYDGGKPVLKMRVVV
                     GDEYGKATPVFADSMTFVVFRPYWYVPHRILVREILPRIRKKRSYLVRHHFEVVDAKR
                     EPLVLNPRRINWSRVDFTKVRVRQRGGSPTNPLGLVKFMFPNQFAVYLHDTPTRKLFN
                     RPKRTLSHGCVWVEKPVELADYVLAGQDDWDEKKIREAMQTAHSAGEDGGADRHTVTL
                     ERPLPVYIVYFTAFVRDGSLNFRRDPYGKDREAIARLGKLSPSDPRLCEELQKLVGG"
BASE COUNT         1601 a         3091 c         3152 g         1714 t
ORIGIN      
        1 cagcatggag cgcagtagat cggtcggacc gaacgaggct tgccgcgtgg gtgtggcgac
       61 cagcaggcca ccgacgctgg gcccggcgcc atcgaccggc accacgaggt agcggacctt
      121 gccggtgggt gatcccaggg cgagcacccc cccgtgccgg gtcagatgcg gggtgtgcaa
      181 cggagcggtg aggcgctcga gcgcttcggc gttcagggaa cgggtgacgt cggagagcgc
      241 cagcacctgg ccggcggtgt cggccaccac caggtagtcg cgggctgcct ccaggtacgc
      301 gctgatggcg gggtcgagcg agggtcttgg cccggagttg gttacgatcc ggccgagcac
      361 cttgtatgac tgggtcagcc agcgatgggc gaggtcggac tccaggctca ggcgttggtc
      421 cagctcccgg acgctggcct gacggcgctc gacgtacagc gcggtgccga aggcaagcac
      481 tgtcaccgcg agggccaccg tataccacac agtgagccgg cggcggatgg tggtcatgtc
      541 atgccttcac cacgtacccg acgccacgca ccgtgtgcac cagcctctgg gtatgccccg
      601 aatcgacctt cttgcgcaga cgattgatca ccacatccac gatgttggtt ccgggatcga
      661 agtggtaatc ccaggcatac tcggtgatca acgtacggga catgacccgg ccggcgtgcc
      721 gcatgaggta ctccagcacg gtgtactcct tgggggtgag ctcgatccgc tcacccgcgc
      781 ggcggacctc acgagtggcc atatcgagct cgagatcgcc cacccggagc acgggcgtgc
      841 gaatctcctt gggtcgccgg cccaacgcct ccacccgggc cagcagctcc tcgaacgcaa
      901 acggcttggt cacgtagtcg tcggcgccgg agcggagggc ctgtactttg aagtccaccg
      961 catcctgggc ggtgagcacc agcacgggcg tggtgttgcc ccggtccctg agagtgcgga
     1021 gcacctccag cccgttcatc tcgggcagac gcaggtcgag gacgatcagg tcgtaccgcc
     1081 cgcccgaggc gagtcggaga ccctccatgc cgtcatccac cagatcggcg tggtaccgct
     1141 gctcctccag accccgcttc acatactggc cgacggtgcg gtcgtcttcg acgacgagaa
     1201 tcttcatctg cttgaggtat tatgcgccgg caggtaaacc cggaagatcg agccccggcc
     1261 cggttggcta tccacctcga ttcggccccg gtgctcctcc acgatgccat agcagatgga
     1321 cagcccgagg ccggtgccgc gcccgggcgg cttggtggtg tagaacggct cgaagatctt
     1381 cgactggtct gcccggggga tgccgatccc attgtcttcg atctccagga caacctcgtc
     1441 ggagtggtgg ggactccgcc cggtgcgcac ggtgagcctc ccgcggtcgt ccatggcgtc
     1501 caccgcgttg agcatcagcg ccatgagcac ctgggtgagc tgctccgtgt tgccggtcgt
     1561 ggtcggcagc gccgggtcca gctggcgact cacggtcatg cgcttgaagc gctggtggtg
     1621 cttgagcaga aacagtgtct catccaccag ggcgttcagc atcacctgag ccttggtctt
     1681 gcccttgggc cggctgaagt cgagcaagcc atcgacgatg cgagtgcagc ggtccacttc
     1741 cttatcgatg atctcgaggt actcctcgac ggcggccttt tcccgacggt cgaggtcttc
     1801 gaggcggccg gtgatggccg cgacacacgc gctgatggtg gcgagtgggt tgttgatctc
     1861 gtgcatgacg ccggccgcca gctgaccgat ggccgcgagc ttctcgctct gcatgatctg
     1921 gccctgggtc cggcgcgact cggtgacgtc ctcaccgatg gtaatcacgt ggctgatcgc
     1981 atcaccctcg agacgcatgg ggatcttgct cagccggaag gagcgcacct cgccgccgag
     2041 ggtaacatcc agctcggcct gttggatttg gccggtttgg aacacccggt cgaagtcggc
     2101 gcggagctct tcggccggct ggcgggtgag cacctcgaac accggccggc ccaccacctc
     2161 gtcccggcgg agaccgggcg cgccgatctc gcgctgccgg ttccagatct ggatccgata
     2221 ttcccggtcc acgacgtaga gcccgaccgg caggctgtcg atgatgaggc tggtgaaacg
     2281 gcgctgctca tcgatctcgc gagactgcgc ggccacctcg accgcgaagt ccgccgacag
     2341 cgccagggag gcgaggaagg tcgcgaggag gtcggccacc accacgacga catcgcgggc
     2401 gtcgggatcc ggctcgggcc gcagctcgag cagcccgatg caggcctcct catgctcgag
     2461 cggaaggcgg gcgccgggcc cgccatcagg tatagcctgc agcgagtcgg ccagcagcgg
     2521 cgggccggat gccggcgggg ccgacaccac gcggaaacaa ccggtcgcgg cgtcgcggaa
     2581 ccagatgccg acgccttcga cgtgcaaccc ggttcgcagc gactcggcaa cggccatcaa
     2641 ggtctcgtcg gcctcgagcc cgtcgttcag cagcctggcg acgatgccga ccagctccaa
     2701 acccgtatgc ggcgtcagcg cacgctccct cgtggcgcgg acaccgccgc cacgctcaga
     2761 atacgccagt ccccatcgat ccggcgaagc accacatgct cgacccagtc acgttcggtg
     2821 gaggtggatc cagagggggt ccgccggcgg gtgaccaccc atgcggcggc caggtcgccc
     2881 tcctgtcgca gatcggtgcg gagcacccgg acatcgaagt tccgccgctc tgcgccctgg
     2941 agccagcggt ccagcacgcg cagcgccgca tcgatggata ccgcctgatg gtagttggtc
     3001 ggcgcccccg ggccgagcgg cccggcatat gtgccgtctt gccagaagag cgaccgcaca
     3061 ccggtccagt cccgcgccga gaggctgcgc gcgtagccgc tgatgagatg ctggatcctg
     3121 tcttcatccc ggcgggtgcc cgtcggggtg tggtcttcga tccggcatcc cccggcgacg
     3181 aggataccga cacagagcgc cgcgaggcgc agacggctca tgcggatcgc cggtgcgcct
     3241 ccagctgtgc aagcagctcc tggttggacg gctcgctcac ctcatcgcct tctcgagccc
     3301 tctggccttc tcgaaccgct tggcgatgac cgtccagttg acgacactcc accatgcggt
     3361 cacgtagtcg gggcggcggt tctggtactt cagataatac gcgtgctccc acacgtcaca
     3421 cccgagcacc ggagtcttcc cctccatgac cggggtatcc tggttcgggg tgctttcgat
     3481 gaccagcttt ccgctgcggt cgaccgtgag ccagccccag ccactgccga accgttccac
     3541 gcacgccttg gcaaactgct ccttgaacgt ggcgaagttt ccgaaggccc gcgtgatggc
     3601 ctcggccagc gcaccgcccg gttccttggc accgcccggt gccatcatct cccagaagat
     3661 cgtgtggttg gcgtggccgc cgccgttgtt gcggaccttg gtgcggatag cttccggcac
     3721 ctggttcaga ttgccgagca gctcttcgat cgatttcttc tgcaggtcgg gttgggcctc
     3781 tagcgctgcg ttgaggttgt tgacgtaggc ggcgtgatgc ttgtcatgat gaatccgcat
     3841 ggtctgctca tcgatatgcg gttccagcgc cgtatagtcg tagggtagag ggggaagggt
     3901 gaacggcatg accgactcct cgcgctgaag atacctcgat aactttccgg cttaagcggc
     3961 gaaatatcat tgcgtgcaag agaggggtca acgacaatgg ctgccggcgg tccccagcgt
     4021 tcgtccgtcc aggcggtaga accgatctac ctcatcgagc gtttccccgg cttgcatcag
     4081 gagctgatga gcctgttacg cgggctcgat gaggcggact ggtccagacc caccgcatgc
     4141 gcgctatggt cggtcaagga catcgtggcg catctgctcg ataccggcct caggcggctc
     4201 tcctccggcc gcgatggctt catgccggca cctgaagccg gtatcgcgag ctacaccgac
     4261 ctagtcgcct acctcaatcg actcaacgcc gagtgggtag gcgccacccg gcgcctcagt
     4321 ccgcgggttc tcatggagct gatggacgta actgcccccc aagtccatgc gttcttcggt
     4381 tcgctcgatc cgcatgcacg ggccttattc ggggtagcct gggccggtga ggagtcctcg
     4441 ccggtctggt tcgacatcgg ccgcgagtac accgagcgct ggctccacca gcagcagatt
     4501 cgtgaggccg tcgccgcgcc aggcctgctc gggcgtgagt ggctttaccc cgccctggac
     4561 atcttcatgc gcgccctgcc ccatacgtat cgtgcggtac ctgcggagcc ggggcaaagc
     4621 attcacttcg ccatccgggg agaggcgggc gggaactgga cgctccgccg ccagtcgcag
     4681 ggctggagtc tcttcaccgg acgcgatgat caccccgcca cgcgggtgag tctggaccag
     4741 gagaccgcct ggaagatttt ctccaagggt ctgtccccgg agggagcccg gcggagcgtc
     4801 agaatcgagg gcgactcgag gcttggcgag ccggttttcg gtgccttagc agtcatggcc
     4861 taggggctgc caagtttggc aggttgtgga tcgtattttg caccgtcgtc gtgctcgagt
     4921 acagcagaat ctcgccgggc atgctgtgtc tcactctgac aaatcgggat ctcgcggacg
     4981 agcggctgaa cgattcatcc tgagggacct cgggtgaaac gcaaccgtcg cggatatctg
     5041 caaggccctg aacgacatcc acggccccac gcaccccagc agaagggaca ccgcacgtga
     5101 ctgtagccat cgacatcaac ccttcggcgg cggccgaggc ctatttgagc gaggcgaggg
     5161 ctaaacgggg tcagctcacc aaacggaaat cctggcggcc ggctagagag ctcgcggtgg
     5221 acctggggac cgccaacacc ctcgtcttcg tgaagggcga aggcgtggtg ctgaatgagc
     5281 cgtcggtggc agccgtggat caggcgaccg gcaagattct cgggatcggg ctcgaggcca
     5341 agcggatgtt ggggcgaacc ccggaaggcg tcctggccgt ccgacccatg aaggatgggg
     5401 tcattgcgga ctttcatatc gcggagaaga tgctccggca ttttatccgg ctggtgatcg
     5461 atagaacctt cctgcgggtg aagcccaccg tcatcgtctg cgtcccttcc ggcatcaccg
     5521 aagtcgagcg ccgcgccgtg cgcgactcgg cgcagtctgc cggggtcaag cggctgtaca
     5581 tggtggcgga gccgatggcc gcggccatcg gggtcggcct tccggtggac acgccggtcg
     5641 gcagcacggt gatcgacatc gggggtggga ccacgaatat cgccgtcatc gcgctctccg
     5701 gcatcgtgtg cgacgcgtcc atccggaccg gcggtgacga actggatcag gctatcgtac
     5761 agttcatgcg gaagacgtac agcctgctca tcggtgagcc cactgccgag cggatcaaga
     5821 tcggtctggg ctcggccgtg cagctcgagc gcgaggggga gatggatgtc aagggacggg
     5881 acctcgtctc cggcttgccc aagaccatcc ggatcgactc ccgtggtgtg cgcgaggcca
     5941 tcgaggagcc cgtctcccat atcgtgaacg cggtccggcg ggctctggag atgacgccgc
     6001 ccgagctggc cagcgatgtg ctcgagtacg gcatcatgct taccggcggc ggctcactga
     6061 ttcgggggct ggaccagcgg ctgatggacg agaccggctt gccggtccgg gtggacgagg
     6121 atccactgac gtccgtcgtg cgcggcactg gtcgcattct cgacgagttc gcccgctaca
     6181 ataccgttct gagtacctga gctttcccgg gtgcgcgcaa gcgcatccgg gagcactcgt
     6241 cccatacacc ggcattcccg cctacgggcg agggtgtcgg tgtgtggttt ttgggggtgg
     6301 taaaggccat gatccgttgg tatcctcccg cgtcaatgac tgcccctact gtccaccagg
     6361 tggcgccctg ggttgagcga ctcgcgcgga tcgggtacgc cgccaagggg atcctgtata
     6421 tcacggttgg actgcttgcg gcacaggcag gtctcgggcg aggcggtcgg acggtcgata
     6481 cccaaggggc gctccgggtg gtgcacacca taacgttcgg ccgtattgcg ctcctcgtca
     6541 tcgcggccgg gctcatgggg tatgcgatct ggcgcattgt ggaggcggtc gtggatcccg
     6601 acggccgcgg caccgatgcg aagggtctgg cactccgggc gagcttcgcg gccagggggg
     6661 tgctctacgg cgccctcggc atcacggccc tgcgcctcgc cgcccgcgag cgacccgggt
     6721 cgcatagcga acagacccgg cattggaccg agctcgcgtt tgggttgccc gccggcgagc
     6781 tgctggtgtg gctcgccgcc tcgggaattg gtggctacgg gatctatcag ctctatcgcg
     6841 cgtacgcctc gaagctgagc cggcagctgc atctgggcga gctgggcact ggcaccctgc
     6901 gctggatagt gggcgtgagc cgtttcggca ttgcggcccg gggcgttgtt ttctgcctca
     6961 tcgggttttt cctggccgga gcggccgcgc ggcacgatgc tacccaggcc ggtgggcttc
     7021 ggaagtccat gggcgttctc gccggaatcg ggctgtggcc gatcgtggtg gttgcgctgg
     7081 gattggtggc ctatggggtg tacgagctgg tgaacgcccg ataccggaga atcagcgtgg
     7141 gatgagggcg tgagtaggtt agaatcccat gggttttgcg ccttacacca ctcgctcgtg
     7201 gggcgccctt tttttaatga aggaggaaca ccatgccagc gaaggccgat tcgcagagcc
     7261 aacccagacg ccagcagccc gagtcgctcc ggctccgctc aatctcgcca accctcaccg
     7321 tcaacgacgt ccagcgcagc gtggcctggt accgcgacgg actcgggttc tttgtgtccg
     7381 aacgttggga ggaaggcggc cggctccagg gcgtgatgct caaggcaggg gcgtgccacc
     7441 tcggcctctc gcaggccgac ttcagcaaag gccgcgaccg tgtcaagggc gtgggcttcc
     7501 gcatctgggg cgacacgaca cagaatgtgg acgcgatcgc ggagcgcctt cgggccttcg
     7561 gtggcaccat cgtcgaagag ccgggcaacc actgggacac ctacagcttc acggcgcagg
     7621 acccggacgg gtttaagatc acgattactg ccacacgacc ctgatctccg ctggctgtat
     7681 ccttgacgca tgagcttcgc cgagctggcc ggccacctca tcctccaaca agcttctgga
     7741 gctcctcgca aagccggggg tcgctcgggc tcagctttcc cagtctggca atcgcctcgc
     7801 gatccttgcc atagggatcg cgccgaaagt tgaggctgcc gtctcggacg aatgcagtga
     7861 agtagacgat gtaaactggc agcggccgct ccagtgtgac ggtgtggcgg tccgcgcctc
     7921 catcctcgcc cgctgaatgc gccgtctgca tcgcctcccg gatcttcttc tcgtcccagt
     7981 cgtcctgccc cgcaagtacg tagtcggcca gctccaccgg cttctccacc cacacgcagc
     8041 cgtgactcag cgtccgcttc ggccgattaa acaatttccg ggtgggtgtg tcatgcagat
     8101 agacggcgaa ctggttcgga aacatgaact tcaccaatcc gagcgggttc gtggggcttc
     8161 cccctctctg tcgcactcga actttggtga agtcaacgcg ggaccagttt atcctgcgcg
     8221 ggttcagcac cagtggctcg cgtttggcat cgaccacctc aaaatggtgc ctgacgaggt
     8281 aggagcgctt cttcctgatt ctcggaagaa tctcgcggac caggatccgg tgcggcacat
     8341 accagtacgg ccggaagacc acgaacgtca tcgagtccgc aaacacggga gtagccttcc
     8401 cgtactcgtc gcccaccacc acccgcatct tgagcaccgg cttgcccccg tcgtagccat
     8461 aaagctcgta atcgggaatg ttcacataga tgtaccgggg cccgaactcc gcgggaagcc
     8521 agcgatagcg ctccaagttg agctggatct gccgaatccg tacctggacc ggcacgttga
     8581 gggcggccaa cgtcgcggcg cccacaatgc catcgctcgg gatcccatgg cgcgactgga
     8641 aacgcgctac cgctttggcc acagcgcggt tgtagactgg tttgctcccc gccgaactgc
     8701 gaaggtcccc cgttatcctg agtcgccgac gcagcaccgc tacgcgggcg ccccggtcgc
     8761 cacgccggag tctgctacgg cccggcacct gaggccagcc gccgtgccca aggatttcgc
     8821 ggtagccggc aagcgctttc acaagttcgg catacccggg cagatttggg cggagcggag
     8881 ccacaatgcc ctggaacgct tccgcctgcg cggcgcctcg gagcgtgccc tcgatgctcg
     8941 agcgccgcgc cctgatgtac cacccgctcg cgactgcctt cggatcgagc cggcccgcca
     9001 gcaaatcagc cccatagtcg aggaaccgtc tcgtgagctc gagatcgagc acggcgaagg
     9061 cttccggcct ctgcttgttg aggctcggac gcaaccgctc cagggtgcgg cggaactcgc
     9121 cgagacggta gtccgcagga cgaagtcctt cccgttcggc atcacatagg ttcgcgatca
     9181 agtccttggt tctctccggc attggacgaa ttccgaccca gagcgggcgg tactgtcgat
     9241 cctcgtagat ctgcctgacc aacttccagc ggaccccctc aaggtatgcc gggggcctct
     9301 cggccgaggt gatgttgcgg atctcatgac taatccgatc ggcggactgg cggcagccga
     9361 ccgtgcccag cagggcaatg acgcatggcc acacagtcag agagggtcga aacatgacag
     9421 tcacggctca gcaggaaatc gccatcgcgc gacgctcaaa gtgtaagtca cgcacgggga
     9481 cgtggccggg cggcgggagt ggggggaagg ctagcgaatg acccgatcca ggggcaccgc
     9541 cccttcgagc gggtagtt
//
LOCUS       DASYRV010000057         3789 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1686067, whole genome shotgun sequence.
ACCESSION   DASYRV010000057 DASYRV010000000
VERSION     DASYRV010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3789)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3789)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3789
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1686067"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..182
                     /locus_tag="VGQ24_01215"
     CDS             <1..182
                     /locus_tag="VGQ24_01215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453476.1"
                     /translation="VALCGLYVTLGQADAAFEWLEQAYQERRGWLAYLKIEPMLDGLR
                     NDPRFARLVERMRLT"
     gene            214..573
                     /gene="ytxJ"
                     /locus_tag="VGQ24_01220"
     CDS             214..573
                     /gene="ytxJ"
                     /locus_tag="VGQ24_01220"
                     /inference="COORDINATES: protein motif:HMM:TIGR04019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol system redox-active protein YtxJ"
                     /protein_id="HEV8453477.1"
                     /translation="MRKISSEADVATALAEPLAVLYKHSPICPTSGIAYEEMRSLRRI
                     HQDVPVYLVDVIHCRPLSCKIAETVGVVHASPQAIILRGGVSAWHGSHFDLRAEEMAQ
                     KLHSLKAETKPGVERSK"
     gene            793..1440
                     /locus_tag="VGQ24_01225"
     CDS             793..1440
                     /locus_tag="VGQ24_01225"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEV8453478.1"
                     /translation="MVIPSSEGTTRILIIDDDPKTSPPLPQASDSGPAASSGATWPPE
                     TERPADHVRPVVHEYQIATPIPGELVPAREASGELSENGHPNTTTVRELIARVEELLY
                     RTRSLPAATSPGWAGTIQFGSVLLEPATQTVLRSGQPVRVTHTEFRLLLALIRRRGAI
                     ASRVELLREVWGAGAAVSRRAVDTHIARLRRKLEDDPANPRHILTALAWGYRFRP"
     gene            1522..>3789
                     /locus_tag="VGQ24_01230"
     CDS             1522..>3789
                     /locus_tag="VGQ24_01230"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEV8453479.1"
                     /translation="MAQALSGTERRPLLRSWLAAAFVLLPAQILAQQPVTLTGRVTSD
                     AGQPLASAGVIIEQLSAGAVTRPDGSYTILIPGARVPSGPVTVIARLVGYKARTAQVD
                     LSSGSTTQDFTLPDNPLQLGELVVTGAGTVSEVEKLGTGRSSVDSLSIVRSSEPNVIS
                     ALAAKAPNVTIVSSSGDPGASAHIQIRGQTTISAGSGISGADAQPLIIVDGVPVDNSV
                     SYNNPSFASLNSSAAPSNRAIDINPNDIENVEVLKGAASGAIYGSRAGQGVILITTKK
                     GHPGPTKYSLRSSASFDEVSRLPELQQKYGLGAGGVAPACVSGGAPNCGVPFASAGSW
                     GPAIPAGTPSFNHAGEMFKTGHTFDNALTISGGNDRTTFFLSGGATTQRGIITGNNDK
                     FDRISVRFNGSHRVFDNLKVGANIAYIDGDGGFITSRNSTDGLLLGAWRSPPDFNNQP
                     YLDPTSHLQRSYRFPNPAAGSEQQSRFYDNPFFVANESFNKSQIGRTFGGVNAEFTAT
                     PWLSFNYTLGADYSNDERTQAWPWSTSNTTVVGVNGVGGVNAGYIKTFQIDHNLTATA
                     RYKLSPAWSGSVTVGQNLNSNSYQTRQTLGTGLIAPQPFNLGNTSSQLPPYDYKQTIR
                     LESYFAQVSADLFDQLFLTAAIRNDGASTFGATTRHNWYPKGSASWTFFRSAEGTNRF
                     LTYGKLRAAYGQSGTQPAPYLLSSVLLGAWNGNDGGWGPAISTQQNGVGGLISTFILP
                     TTNLGPERVKEFETGF"
BASE COUNT          697 a         1278 c         1160 g          654 t
ORIGIN      
        1 ccgtggcgct ctgcggactc tacgttacgc tgggtcaggc cgacgccgcc ttcgagtggc
       61 tggaacaggc ctaccaggag cggcggggct ggcttgctta tctgaagatc gagccgatgc
      121 tggatgggct gcgaaacgac ccgaggttcg cccgcctcgt ggagcgcatg cgcctgacgt
      181 agatgcacca ggagagccct gctacgtttg gacatgcgca agatttcctc tgaggccgac
      241 gtcgccacag ccctcgcaga gccgcttgcc gtcctgtaca agcacagccc gatttgcccc
      301 accagcggca tcgcctacga ggaaatgcgc tcgcttcgcc gcatccacca ggacgtcccg
      361 gtgtacctgg tcgacgtgat tcactgccgc ccgctctcct gcaaaatcgc cgagacggtg
      421 ggcgtggtgc acgcgtcccc tcaagcgatc attctgcgtg gaggggtttc tgcctggcat
      481 ggttcccatt tcgacttgcg ggccgaggag atggcgcaga agcttcactc gttgaaggcc
      541 gaaacgaaac ccggcgtcga acgctcgaaa tgaaacatca gtaggtcgcc cgggttccag
      601 acccgccacc tccgcacaac cgcttcgtac catcgaacac gcacttcacg cacgcagaac
      661 agcaatccac tcccaatctg ttcctcacca agccggcaga acctatcgta accgccggac
      721 actaaacccg gcggtggcat cgccgtgaca ccggtgtcgc ttcggtggac cgtttcggca
      781 tcgccgtgcc gcgtggtcat cccatcctcg gagggcacta cgcgaattct catcatcgac
      841 gacgatccca agacgagccc gccgctcccg caggcttcgg acagcggccc cgcggcgtcg
      901 agcggcgcga cttggcctcc agagacagag aggccggcgg atcacgtacg gcccgtggtg
      961 catgagtatc agatcgccac gccgattccg ggtgagctcg ttcctgcccg cgaagcctcg
     1021 ggagagctca gcgagaatgg ccacccgaat acaaccacgg tgcgggagct cattgccaga
     1081 gtggaggagc tgctgtaccg gactcgcagc ctcccggccg cgacgtcgcc gggatgggcc
     1141 ggcactattc agttcggcag cgtcctcctg gagccggcaa cgcagaccgt gctgcggtcg
     1201 ggccagccgg tccgggtcac ccacaccgag ttccgcctct tactggcgct gatacgccgt
     1261 cgcggcgcca tcgcgtcacg ggtcgagctg ttgcgggaag tctggggcgc cggtgcggcg
     1321 gtcagccggc gcgcggtgga cacccacatc gcgcggctgc gccgaaagct cgaggacgac
     1381 cccgccaatc cgcgtcacat cctgaccgcg ctcgcctggg gttaccgctt ccggccgtaa
     1441 atggacggcg tttcggagcc ggtgacgggc tccggaacgc ttcgactctg gccgtcacgc
     1501 tttgtacgga ggaaagagca catggcacaa gcattgtctg gaacggagcg gcgtccgctg
     1561 ctgcggagct ggctcgccgc cgctttcgtg ctgctgccgg cccagatcct ggctcagcag
     1621 ccggtaacgc tcaccgggcg ggtcacgagc gatgcgggac agccgctcgc ctctgccggc
     1681 gtcatcatcg aacagttgag cgcaggggcg gtgacccggc ccgacggtag ctacaccatt
     1741 ctcatcccgg gagcccgcgt gccctcgggg ccggtgaccg tcatcgcccg gttggtgggg
     1801 tacaaggcgc gaaccgccca ggtcgacctg agctccgggt ccacgaccca ggattttacg
     1861 ctgcccgaca acccgcttca gttgggggag ctggtcgtga ccggtgccgg gacggtgagt
     1921 gaagtggaga agctcggaac cgggcgcagc agcgtggact cgctctcgat cgtgcggagc
     1981 tcggagccca acgtgatcag cgcgctcgct gccaaggccc cgaacgtgac gatcgtctcg
     2041 agctcgggtg accctggtgc ttcagcccac atccagattc gcggccagac gacaatcagc
     2101 gccggcagtg gcatcagcgg cgccgacgcc cagcccctga tcatcgtgga cggagtgccg
     2161 gtcgataact ccgtcagcta taacaatccc agcttcgcgt ccctgaactc cagcgccgct
     2221 ccctccaatc gggccatcga catcaatccg aacgatatcg agaacgtcga ggtactgaag
     2281 ggagccgcgt ccggtgccat ctacgggtcg cgagccgggc agggcgtcat cctgatcacc
     2341 accaagaagg gccatcctgg gccgaccaag tactcgctcc gcagctcggc ttcgttcgac
     2401 gaggtctcca ggctgcccga gctgcagcag aaatacggcc ttggtgccgg tggggtggcg
     2461 ccggcctgcg tgagcggagg cgcgccgaat tgcggagtgc ccttcgcctc cgcagggagt
     2521 tggggaccgg cgattccggc cggtacgccc tcctttaacc acgccggcga gatgtttaag
     2581 accggtcata ccttcgataa cgcgttgacg atttcaggcg gcaacgaccg taccacgttt
     2641 ttcctgtcgg gtggggccac gacccagcgc ggtatcatca ccggcaacaa cgacaagttc
     2701 gatcgaatct cggtgcgctt caatggctca caccgggtct tcgacaacct gaaagtcggc
     2761 gccaacatcg cctatatcga tggcgacggc ggtttcatca ccagccggaa cagcaccgac
     2821 gggctgctgc taggcgcctg gcgttcgccc ccggacttca ataatcagcc gtacctggac
     2881 ccaaccagcc atctgcagcg ctcctatcgg ttccccaacc ccgccgcggg ttcggagcag
     2941 cagtcgcggt tctatgacaa tccgttcttc gtggccaatg aatcgttcaa taagtcgcag
     3001 atcgggagga cgttcggcgg ggtaaatgcc gaattcaccg ccaccccatg gctttcgttc
     3061 aactacactc tgggcgccga ctattccaac gacgagcgta cccaggcctg gccctggtcc
     3121 acctccaaca cgacggtcgt gggtgtgaac ggagtcggcg gggtcaatgc cggctatatc
     3181 aagacgttcc agatcgacca caatctgacc gccacggccc gctataagct gagtccagcc
     3241 tggagcggct cggtgacggt gggtcaaaac ctcaactcca acagctatca aaccaggcag
     3301 acgctcggca ccgggctgat cgccccccag ccgttcaatc tcggcaacac ctcttcgcag
     3361 ctgccgccct acgactacaa gcagacgatc cgactggagt cgtactttgc ccaggtcagc
     3421 gcagatctgt tcgatcaatt gttcctgacg gccgccattc gcaacgacgg cgcgtctacc
     3481 ttcggggcga ccaccaggca caactggtat cccaagggta gcgcttcgtg gaccttcttc
     3541 cggagcgcag aggggaccaa ccgattcctg acctacggca agttgcgagc ggcctacggt
     3601 cagagcggca ctcaaccggc accctacctc ctctccagcg tgctgctcgg cgcctggaac
     3661 gggaatgacg gcggctgggg cccggctatt tccacccagc agaacggcgt tggtggcctg
     3721 atctccacct ttattctgcc gactaccaac ctcgggccgg agcgggtcaa ggagttcgag
     3781 accgggttc
//
LOCUS       DASYRV010000058         1900 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2101809, whole genome shotgun sequence.
ACCESSION   DASYRV010000058 DASYRV010000000
VERSION     DASYRV010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2101809"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(146..>1900)
                     /locus_tag="VGQ24_01235"
     CDS             complement(146..>1900)
                     /locus_tag="VGQ24_01235"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HEV8453480.1"
                     /translation="ARQVQAYKNRMLETVRTFEEKHAFTLPAATGTAEGSQSPLALPA
                     NFGALEFDKYDDFNILARRMTEVSADVSEAMAQLSTSIHKAREDMGLLQQMTTDLRDE
                     IARTRMVPIGSLFTRFQKAVREMARTVGKDVEVVFSGASTEVDAGVVQRLAEPLIHMM
                     RNAVAHGIEPPAVRKAAGKPEKGTVYLHSFNQRSTIVIEIEDDGAGLNVEKIKAKAIA
                     LGLVRPERAAEMPPADLIEMIYLTGFSTAEEVGDQAGRGIGMDVVRRAVTELNGQIDI
                     ETEPGVGTKFTLSLPLTMLISTALMVRAGDQQYAMPLPTIREVIVPPPGTTNNVSGRP
                     LLQIGEGEAIEVFPLTLLLGVETTPRAGPVPVVVIRTPKGVVGIEVDELLGLQEIVIK
                     TLGSLRLFQGSCYSGATIDPEGRVILVVDVPSLFKREGEKTLPAAHPLPEPLRLEAAG
                     GHKTEQENPSILLVDDSLSVRKFIGRMLEAAGYKVQTASDGEEGLRKATAESFQVIIA
                     DLEMPKMNGYELIQALRDRPETKSTPVIVLTTRAGEKHRQMAQSLGISSYLTKPVEER
                     ALIKEISQFVSAPTAAKP"
BASE COUNT          302 a          615 c          596 g          387 t
ORIGIN      
        1 ggcagcatcc cttcgaagac cgacgccgac agcgctagct tcaccggacc actggtgaag
       61 accagcagac gttcaaacgc ctcaccggct gcggcggctt tgctctgtcc ctgcaggctc
      121 atacacaatt ccctctacac agcgattacg gtttggccgc tgtgggcgcg ctcacaaact
      181 ggctgatctc cttgatgagg gcccgttcct cgaccggctt ggtgaggtac gaggagatcc
      241 ctaggctctg ggccatctgg cggtgcttct caccggcccg ggtcgtcagc acgatgaccg
      301 gtgtggactt tgtctccggc ctgtcacgca gggcctggat gagctcatag ccgttcattt
      361 tcggcatttc caggtctgca atgatgacct ggaacgactc agcggtggct ttccgtagcc
      421 cttcctcgcc atcggaggcc gtttgcacct tgtagcccgc cgcctccagc atgcgcccga
      481 tgaatttcct gacactcagc gagtcgtcga ccaggaggat cgacgggttc tcctgctcgg
      541 tcttatggcc tcccgccgcc tccaaccgca gcggttcagg caacgggtga gccgctggca
      601 gggttttctc cccctcccgt ttgaagaggc tgggcacgtc caccaccagg atgacccgac
      661 cttccggatc aatggtcgcc ccgctgtagc aggagccctg aaagagcctg agcgagccga
      721 gggtcttgat gacgatttct tgcaggccca gcagttcgtc cacctcgatg cccaccacgc
      781 ccttcggcgt gcggatgacc accaccggaa caggacctgc gcggggggtc gtctcgaccc
      841 ccagcaatag cgtgagaggg aacacttcga tggcttcgcc ctctccgatc tgcaggaggg
      901 ggcgtccgct gacattattc gtggtcccgg gcggcggcac gatgacttcc cggattgtgg
      961 ggagcggcat cgcgtattgc tggtctccgg cccggaccat cagcgcggtt gaaatgagca
     1021 tggtgagggg gaggctcagg gtgaatttcg tgccgacccc aggctcggtc tcgatgtcga
     1081 tctgcccgtt gagctcagtg acggcgcgtc tgaccacgtc catgccgatg ccacggcccg
     1141 cctgatcgcc aacttcttcc gccgtcgaga agcccgtgag gtagatcatc tcgatcaaat
     1201 cggccggggg catctccgcg gcccgctcgg ggcgcaccag acccaacgcg atcgccttcg
     1261 ccttgatctt ctcgacgttc agcccggcgc catcatcttc gatctcgatc acgatcgtac
     1321 tgcgctggtt gaaggagtgg aggtacaccg tgcccttctc gggctttccg gcggccttgc
     1381 ggactgccgg cggttcgatg ccgtgggcca cggcgttccg catcatatgg attaggggct
     1441 cggccagtcg ctggacgacg ccggcgtcca cttcggtgct ggctccggag aagacgactt
     1501 cgacatcctt gcccaccgtc cgcgccattt cgcggaccgc cttctggaac cgggtgaaca
     1561 gcgagccgat ggggaccatc cgggtacggg caatctcgtc gcgcaggtcg gtggtcatct
     1621 gttggagcag gcccatgtcc tcgcgggctt tgtggatcga ggtgctgagt tgggccatcg
     1681 cctcgctgac gtcggccgac acctcggtca tgcggcgcgc caggatgttg aagtcatcgt
     1741 acttgtcgaa ctcgagcgcg ccgaagttgg ccggcagggc gagcggagac tggctgccct
     1801 cggcggtgcc cgtggccgcg ggcaaggtga aagcgtgctt ctcttcaaac gtccggaccg
     1861 tttcgagcat ccggttctta tacgcttgga cctggcgcgc
//
LOCUS       DASYRV010000059         5259 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_856130, whole genome shotgun sequence.
ACCESSION   DASYRV010000059 DASYRV010000000
VERSION     DASYRV010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5259
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_856130"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..925)
                     /locus_tag="VGQ24_01240"
     CDS             complement(<1..925)
                     /locus_tag="VGQ24_01240"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEV8453481.1"
                     /translation="MQSDNLKPRSHLPIPDLPRRGLITYDAKDPETKYPPIEQLRPPK
                     GAPNILVILIDDAGFGSASAFGGPCQTPNAERLAAGGLKYTRFHTTALCSPTRQAFLT
                     GRNHHSVGMGGITEIASGSPGYSSVLPNTAAPIAKTLKLNGYATAQFGKCHEVPVWET
                     SPAGPFNAWPTGGGGFEYFYGFIGGEAHQWYPSLYEGTTPIEVKRTPEEGYHFMEDMT
                     DKAISWIGQQRALMPDKPFFAYFAPGATHTPHHVPKEWADNYEGRFDAGWDAVREETF
                     ARQKALGVVAADCDLTERPGEIPAWDDMDEAL"
     gene            complement(1050..2561)
                     /locus_tag="VGQ24_01245"
     CDS             complement(1050..2561)
                     /locus_tag="VGQ24_01245"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylsulfatase"
                     /protein_id="HEV8453482.1"
                     /translation="MAEPTPKKPNILIIWGDDIGQSNVSAYSKGMMGYQTPNIDRIAH
                     EGMIFTDYYGEQSCTAGRSAFITGQSVFRTGLSKVGLPHAPVGLRAEDPTIAELLKPL
                     GYATGQFGKNHLGDRDEYLPTMHGFDEFFGNLYHLNAEEEPELRDYPSEKDFPNFRKN
                     YGPRGVLHCWANPDGTQRIEDTGPLTKKRMQTVDNEFLAAATDFIKRQHQAGTPFFVW
                     FNATHMHFRTHAQPESLGQAGRWQSEYHDVMIDHDKAVGQLVRLLDELGIANDTFVMY
                     STDNGPHMNSWPDAGMTPFRNEKNSNWEGAYRVPAMVRWPGKIKAGTVSNEIVSHLDW
                     LPTLLAMAGEPAIIEKLRQGHQAGKKTFKVHLDGYNLLPYLTGAETKSPRSGFFYFSD
                     DGDLTALRYDHWKVVFMEQRVAGTLRIWQEPFVSLRFPKLFNLRTDPYERADITSNTY
                     WDWVLDHIFLFLPAQTFVGQFLATFKEFPPRQKAASFTIDQVLQKLTEGTKSS"
     gene            complement(2591..3601)
                     /locus_tag="VGQ24_01250"
     CDS             complement(2591..3601)
                     /locus_tag="VGQ24_01250"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF024122.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEV8453483.1"
                     /translation="MRLRTINGLVLGTLLLAFAQAHAQTDPLPSWNEGAAKKAIIDFV
                     QATTTQGSPTFVAPAARIATFDQDGTLWVEHPMYTQVIYCLERVRALVKAKPELAKVE
                     PFKTVLSGNREAMARLTLPDLEKILAATLTGMSVDEFNSEAKKWMAAAKDPRWKRPYT
                     ELTYLPMQEVLKYLRASGYKTYIVTGGGQDFVRVYAEEVYGIPPEQVVGTAGGTKYGY
                     AKDGKPFLTKEPKLLLNDNNAGKPEGIHLLIGRRPHAAFGNSTGDRQMLEYTTAGDGT
                     RLSMLVLHDDAKREYAYGPAEGLPATKVGAFTQALYDEAKKKGWTIISMKNDWKRIFS
                     FE"
     gene            complement(3693..>5259)
                     /locus_tag="VGQ24_01255"
     CDS             complement(3693..>5259)
                     /locus_tag="VGQ24_01255"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="arylsulfatase"
                     /protein_id="HEV8453484.1"
                     /translation="YHRGLMVGETPNIDRIGNEGAMFVDYVAMQSCTSGRNAFFTGMY
                     PLRTGMIPPQLPGSPSYLRPGTPALAKFLLDLGYTTGEFGKNHLGDHTASLPTAHGFQ
                     EYWGYLYHLDAVQQVSFPDINSTPTVQGIAPPCRNTPVPGLPEVPGAVDPKTTICLTP
                     PRPVIFCKSSDGSERNQTCSDQGALTLERSKTVDEEISARVVDFLDRNDPKKTSKPFF
                     VWYNPARMHVVTVLSPKYEAMLGVRGGKDWGVNEAGMKQMDDNIGVVLKKLEDMGQLN
                     NTIVVFTTDNGAESISFPDGGVTPFKGQKGEAWEGGYRAPMVIRWPGVIKPGTVHSQL
                     FAALDWVPTLVDIAGGPKGNGLRDRLEAGQYPGMVKTTLDGFNQRDFLEGKTDKAARD
                     HFFYFSGATPSAVRYKNWKMYYNMSQPGPAGWIMPLVPFHFTLVQNIKRDPFEQMVGI
                     DQKSAMSLGGALGGPMTAFQYDWNMLPLGQQLWEKHLLSYVPFPPLQAPETYNLTGIL
                     EQVKKAGMSHAGD"
BASE COUNT          817 a         1669 c         1727 g         1046 t
ORIGIN      
        1 tgagcgcctc gtccatgtcg tcccaggcgg ggatctcgcc gggccgctcg gtcaggtcgc
       61 agtcggcggc gacgacgccg agggccttct ggcgggcgaa cgtctcctcg cggacggcgt
      121 cccagccggc gtcgaagcgg ccctcgtagt tgtcggccca ctccttgggc acgtggtgcg
      181 gggtgtgggt ggcgcccggc gcgaagtagg cgaagaacgg cttgtcgggc atgagcgccc
      241 gctgctggcc gatccagctg atcgccttgt cggtcatatc ctccatgaag tggtagccct
      301 cttcgggcgt cctcttcact tcgatcggcg tggtcccctc gtacagcgac gggtaccatt
      361 ggtgagcctc gccaccgatg aagccgtaga agtactcgaa gccaccgcca cccgtgggcc
      421 acgcattgaa cgggccagcg gggctcgtct cccataccgg aacctcatgg cacttgccga
      481 actgcgccgt ggcgtaccca ttgagcttga gcgtcttggc aatcggtgcc gccgtattgg
      541 gcagcaccga ggaatatccg ggcgagccgc tggcgatctc ggtgatgccc cccatgccca
      601 ccgaatggtg gttgcgcccg gtcaggaagg cttggcgtgt gggcgagcac agggccgtgg
      661 tgtgaaaccg cgtgtacttg agcccgcccg cagcgaggcg ttccgcgttc ggcgtctggc
      721 acgggccgcc gaaagcgctc gccgagccga agccggcatc gtcgatcagg atgacgagga
      781 tgttcggcgc gcccttcggc gggcgcagtt gctcgatggg tgggtacttg gtctccggat
      841 ccttcgcgtc gtacgtgatc aggccccttc gaggcagatc cggaatcggg aggtgggatc
      901 gtggcttgag attatcgctc tgcacgtatc gctcctttct cctgtgtcct tcgcatcacc
      961 acttggcgag cacgctcttc attccgtgcc gcaccgtgct cggtgaggat atgaaggacc
     1021 gaagccgagt agggaacgga acgcacccct cacgagctct tcgtgccctc cgtcagcttc
     1081 tgcagcacct gatcgatggt gaagctggcc gccttctggc gcggcgggaa ctccttgaac
     1141 gtcgccagaa attgccccac gaaggtctgc gcggggagga acaggaaaat gtggtccagc
     1201 acccagtccc agtaggtgtt cgaggtgatg tccgcccgct cataggggtc ggtgcgcagg
     1261 ttgaagagct tggggaagcg gagcgacacg aacggctcct gccagatgcg caaggtgccg
     1321 gccacccgct gctccatgaa gaccaccttc cagtggtcat agcgcagggc cgtcaggtcg
     1381 ccgtcgtcgg agaaatagaa gaagccggat cgcgggctct tggtctccgc gccggtcagg
     1441 tacggcagca ggttatagcc gtccaggtgt accttgaacg tcttcttccc tgcctggtgt
     1501 ccttgccgca gtttctcgat gatggcaggc tccccggcca tggccaggag cgtgggcagc
     1561 cagtccaggt gactcacgat ctcgttcgag accgtgccgg ccttgatctt gcccggccag
     1621 cgcaccatcg cgggcacgcg gtaggcccct tcccagttgg agttcttctc gttgcggaag
     1681 ggcgtcatac cggcgtcggg ccaggagttc atgtgcggcc cgttgtcggt gctgtacatc
     1741 acgaacgtgt cgttggcgat ccccaattcg tcgagcaaac gcacgagctg gcccacggcc
     1801 ttgtcgtgat cgatcatcac gtcgtggtac tccgattgcc agcgccccgc ctgcccaagg
     1861 ctctcgggct gcgcatgagt gcggaagtgc atgtgcgtgg cgttgaacca cacgaagaac
     1921 ggggtgccgg cctgatgctg ccgcttgatg aagtcggtcg cggcggcgag gaactcattg
     1981 tcgaccgtct gcatgcgctt tttggtcaac ggcccggtat cctcgatccg ctgggtaccg
     2041 tccgggttgg cccagcagtg cagcacgccg cgcggcccgt agttcttccg gaagttgggg
     2101 aaatctttct ccgacgggta gtcgcggagt tccggctcct cttcggcgtt caggtggtag
     2161 agattgccga agaactcgtc gaagccgtgc atcgtcggca ggtactcgtc acggtcaccg
     2221 aggtggttct tgccgaactg gccggtggca tagccaagcg gtttgagcaa ttcggcgatg
     2281 gtagggtcct cggcacgcag gcccaccggc gcgtgcggga gcccgacctt gctcaggccc
     2341 gtgcgaaaga cactctggcc ggtgatgaag gccgaccgcc cggcagtaca gctctgctcg
     2401 ccgtagtagt ccgtgaagat catgccctcg tgggcgatgc ggtcgatgtt cggggtctgg
     2461 tagcccatca tgcccttcga gtaggcgctg acgttcgact gcccgatgtc atcaccccag
     2521 atgatgagaa tgttcggctt cttcggcgtc ggctctgcca ttccgctgtc ctttccgcgt
     2581 gcggttgggg ctactcgaac gagaagatcc gcttccagtc gttcttcatg ctgatgatcg
     2641 tccagccctt cttcttggct tcgtcgtaga gcgcctgcgt gaaggcgccg accttggtgg
     2701 cgggcagccc ctccgcgggg ccgtacgcat actcgcgctt cgcatcgtcg tgcagcacga
     2761 gcatcgacag ccgcgtgccg tcaccggccg tcgtgtactc cagcatctgc cggtcgccgg
     2821 tcgagttgcc gaacgctgcg tggggccggc ggccgatcag caggtggatc ccctcgggct
     2881 tgccggcatt gttgtcgttc agcaagagct tcggctcctt cgtgaggaag ggcttgccgt
     2941 ccttggcgta gccgtatttc gttccgcccg cggtgccgac cacctgctcg ggcgggatgc
     3001 cgtacacctc ttcagcatac acgcgcacga agtcctgacc gccgcccgtc acgatgtagg
     3061 tcttgtagcc gctggcacgc aagtacttca gcacttcctg catcgggaga tacgtgagct
     3121 cggtataggg ccgcttccag cgcgggtcct tcgccgccgc catccacttc ttcgcctcgc
     3181 tattgaactc gtcgaccgac atgccggtca gcgtggcggc gaggatcttc tcgaggtccg
     3241 gtaaggtcag cctcgccatc gcctcgcggt tgcccgacag cacggtcttg aacggctcca
     3301 ccttcgcgag ctccggcttc gccttcacga gcgcgcgcac ccgctccagg cagtagatca
     3361 cctgcgtgta catcgggtgc tcgacccaga gcgtgccgtc ctggtcgaag gtggcgatgc
     3421 gcgcggcggg cgccacgaac gtcgggctcc cctgcgtcgt ggtcgcctgc acgaagtcga
     3481 tgatcgcctt cttggccgcg ccctcgttcc aggacggcaa cggatcggtc tgcgcgtgtg
     3541 cctgagcgaa ggcgagcaga agcgtgccga gcaccaggcc gttgatcgtt cgtagtctca
     3601 tgtgccgtct ccgtgaactc gcacagaagt agatggcggg cgccccccag agggcgcccg
     3661 ccctgtcacg acgttacgcg ccgggcagac gcctagtcgc ccgcgtgact catcccggcc
     3721 ttcttgacct gctccagaat cccggtgagg ttgtaggttt ccggcgcctg cagaggggga
     3781 aacggtacgt acgacagcag gtgcttctcc cacagctgct gaccgagggg cagcatgttc
     3841 caatcgtact gaaaagctgt catcgggccg ccaagcgccc ccccgaggct catggccgac
     3901 ttctggtcga tgccaaccat ctgctcgaag ggatcgcgct tgatgttctg gaccagcgtg
     3961 aagtggaatg ggacgagcgg catgatccag ccggccggcc ccggctgcga catgttgtag
     4021 tacatcttcc agttcttgta gcggaccgcg gacggcgtcg cacccgagaa gtagaagaag
     4081 tggtcgcgtg ccgccttgtc ggtcttgccc tcgaggaaat cgcgctggtt gaagccgtcg
     4141 agcgtggtct tgaccatgcc agggtactgg cccgcctcga gccggtccct cagcccattg
     4201 cccttcggtc cgccggcgat gtccaccagc gtggggaccc agtcgagggc ggcgaacaat
     4261 tggctatgca ccgtgcctgg cttgatgacc cccggccagc ggatcaccat cggcgcgcgg
     4321 tagcctcctt cccaggcctc gcccttctgg cccttgaagg gggtgacgcc gccgtcgggg
     4381 aagctgatcg actcggcgcc gttgtcggtg gtgaagacca cgatggtgtt gttcagctgg
     4441 cccatgtcct ccagcttctt gaggacgacg ccaatattgt cgtccatctg cttcattccg
     4501 gcttcgttga cgccccagtc cttgccgccc cgcacgccca gcatggcctc gtacttcggt
     4561 gacagcacgg tcaccacgtg catgcgcgcc gggttgtacc agacgaagaa aggcttgctg
     4621 gtcttcttgg ggtcgttgcg atccaggaag tcgacgactc tggccgagat ttcctcgtcc
     4681 accgtcttgg accgctccag cgtcagcgcg ccctggtcac tgcacgtctg gttcctctcc
     4741 gatccatcgg atgacttgca gaagatgacc ggacgcgggg gcgtcaagca gatcgtggtc
     4801 ttcggatcta ctgcgccggg gacttcggga aggccgggga ccggcgtgtt cctgcagggc
     4861 ggcgcgatgc cctgcacggt gggagtgctg ttgatgtcgg ggaagctcac ctgctgcacc
     4921 gcgtccaggt ggtagaggta cccccagtac tcctggaagc cgtgcgccgt cggcagtgac
     4981 gccgtgtgat cgcccaggtg attcttgccg aactcgccgg tggtgtaacc gagatcgagg
     5041 aggaacttgg cgagggccgg agtgcccggc cgcagatagg acgggctgcc gggcagctgc
     5101 ggcgggatca tgccggtgcg cagcggatac atgccggtga agaaggcatt gcgccccgac
     5161 gtgcagctct gcatggcgac gtaatccacg aacatcgccc cttcgttgcc gatgcggtcg
     5221 atgttgggcg tttccccgac catgaggccg cggtggtag
//
LOCUS       DASYRV010000060         7496 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1478133, whole genome shotgun sequence.
ACCESSION   DASYRV010000060 DASYRV010000000
VERSION     DASYRV010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7496
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1478133"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1890)
                     /locus_tag="VGQ24_01260"
     CDS             complement(<1..1890)
                     /locus_tag="VGQ24_01260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEV8453485.1"
                     /translation="MASVPEIFQTMAYGPAPEALGPVNEWLERHGRRFGLFIGGAWVP
                     GKGETFETLNPATGKPLARLAQTSASEVDRAVRAARGAQPAWWALGGHGRARHLYAIA
                     RQVQKHSRFLAVLESLDNGKPIRESRDIDVPLVARHFYHHAGWAQLMEQELPDRVPVG
                     VIGQIIPWNFPLLMLAWKIAPALAMGNTVVLKPAEFTSLTALRFAELCQEVGLPAGVV
                     NIITGDGRAGEALVAHPDIDKIAFTGSTEVGRIIRAATAGSGKKLSLELGGKSPFLVF
                     PDADLDSVVEGVVDAIWFNQGQVCCAGSRILVQEGVTDRLVAKLKQRMETLRVGDPLD
                     KAVDMGAIIAPVQLEKIQDLVRRGEEEGAKLWQPTWSCPREGWFFPPTLLTEVSPAAT
                     VAQVEIFGPVVVLMTFRTPAEAVELANNTRYGLAASLWTENINLALDVAPQLKAGTVW
                     INCTNVFDAASGFGGYRESGFGREGGREGLREYVRWADRRTGGQAVRRTDGKTARRAV
                     GKLVGSAERPAKRPPVRPSARPSVPPIDRTPKLYIAGKQTRPDSGYSLPVLDRSGQRI
                     GEVGQGNRKDIRNAVEAAHKAASGWARATAHNRAQVLFYLAENLAAREEEFSLRLTGF
                     EDAASA"
     gene            complement(1981..2973)
                     /gene="deoC"
                     /locus_tag="VGQ24_01265"
     CDS             complement(1981..2973)
                     /gene="deoC"
                     /locus_tag="VGQ24_01265"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004139 - deoxyribose-phosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0009264 - deoxyribonucleotide catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HEV8453486.1"
                     /translation="MTLSPSPAAPLDVLVAPRNPGLPLELDWVEEVRVNRSAVERRAA
                     TLRNRRTVKKEWQAAWLLRAVTLMDLTTLSGDDTSGRVRRLCAKARRPVRTDLLHAMN
                     AEQLPIRVAAVCVYHTFVETALDALEGSGIPVAAVSTGFPAGLSPFEQRIAEIRASVA
                     AGAEEIDVVITRAHVLTENWRALYDEVRAMREACGDAHIKTILATGELGTLRNVARAS
                     LVCMMAGADFIKTSTGKESVNATLPVGLVMARAIRDYRERTSHLIGLKAAGGIRTARE
                     ALDWLALIKDELGDRWLRPDLFRFGASSLLADIERQLEHFVTGRYSAAHRHPSA"
     gene            complement(2970..3728)
                     /locus_tag="VGQ24_01270"
     CDS             complement(2970..3728)
                     /locus_tag="VGQ24_01270"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEV8453487.1"
                     /translation="MFPYRDDNPTLATPVVTLLFITANVFVWLVVQGMGAEPNLSRSV
                     CELGLIPGEFLGRLPDGFRVPLGPAAVCVLGEGRSWITPLSSMFLHGGWFHLIGNMWF
                     LWVFGNNVEDSMGHIRYLAFYILCGLAAAATQAYMNPSSPIPMVGASGAISGVMGAYI
                     ILYPRVRVHMLVILGFFITRIVVPAYVMLGYWFAIQLLGGSLSGEQGGVAFWAHAGGF
                     IAGAIMIHLFRDPELVAKHRVLARTTEDLVYRER"
     gene            complement(3756..4880)
                     /locus_tag="VGQ24_01275"
     CDS             complement(3756..4880)
                     /locus_tag="VGQ24_01275"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEV8453488.1"
                     /translation="MPRAAKQNREKVRYAVIGLGHIAQVAVLPAFAHAENSELAALVS
                     DDPEKLERLGRRYKVKARFGYERYDECLRSGVVDAVYIALPNHLHRPYAERAARAGVH
                     VLCEKPMAVTEEDCLSMIRVAEENGVKLMVAYRLHFEEANLKAIDLVQGGKLGDARLF
                     DSVFTMQVKEGDIRLSPRELGGGTLYDIGIYCINAVRNLYGAEPMEVVAFSANNGDPR
                     FRQCEEMTSAILRFPGRERLASFTCSFGAADVSTYRVVGTDGDLVMDPAYEYADELVQ
                     RVTINGKTRERKFPKRDQFAPELVSFSECILTGAAPEPSGWEGLADVRVIRALYRSAD
                     TGQPVGLEPFEKQDRPSLDQEITRPPVRKPELVNTEAPSE"
     gene            complement(4953..5102)
                     /locus_tag="VGQ24_01280"
     CDS             complement(4953..5102)
                     /locus_tag="VGQ24_01280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HEV8453489.1"
                     /translation="MLWTIFVILLVLWLLGVVTSYTLGGFIHVLLVIAVIMAVMQLIQ
                     GRRAL"
     gene            5369..7318
                     /gene="dnaK"
                     /locus_tag="VGQ24_01285"
     CDS             5369..7318
                     /gene="dnaK"
                     /locus_tag="VGQ24_01285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEV8453490.1"
                     /translation="MASKIIGIDLGTTNSVVAVMEGGDPVVIPNAEGGRTTPSVVAFT
                     KDGERLVGQVAKRQAVTNPKQTIFSIKRLMGRRFGEVQEEVNRLPYKVVEGPHGMAAV
                     EIQGKRYSPPEISAMILQKMKQTAEDYLGYTVEKAVITVPAYFNDSQRQATKDAGKIA
                     GLDVVRIINEPTASALAYGLDKKKEEKVAVYDLGGGTYDISVLELAEGVFEVKSTNGD
                     THLGGDDFDQRLIEWLVAEFKKDQGIDLSKDPMALQRLKEAAEKAKMELSTVNQTDIN
                     LPFITADQSGPKHLNMSLTRAKFEQLVDDLIQRTIPPMQQALKDAGLDPKRIDEVILV
                     GGSTRIPKIQQIVKDYFGKEPNKSVNPDEVVAIGAAIQGGVLGGEVKDVLLLDVTPLS
                     LGIETLGGVTTVLIPRNTTIPTKKSETFSTAEDNQTTVEIHVLQGERQMAQDNRTIGK
                     FQLTGIPPAPRGMPQVEVGFDIDANGILHVAAKDKTTGKEQKIRIEASSGLSESEIDR
                     MVKTAEQHAQEDQARREQIEARNQLDSLVYRVEKDSKEWADRLPADAKSRLESALEAG
                     RQALRTGETEAIRRALDELNQAYSAAGASLYQAAAAGAGTGGTGEPSGGPGQPGPGPG
                     GPGAESGASPDDVVEADYEIVDDKK"
BASE COUNT         1428 a         2463 c         2391 g         1214 t
ORIGIN      
        1 ggccgaagcg gcatcctcga accccgtgag ccgaaggctg aactcctcct cacgggcggc
       61 gaggttctcc gcgagataga agagcacctg ggcacggttg tgcgccgtgg cccgcgccca
      121 acccgatgcg gccttgtggg cggcctccac cgcatttcgg atgtccttcc ggttgccctg
      181 acccacctcg ccaatccgtt ggccggaccg atcgagcacc ggcaggctat agcccgaatc
      241 gggccgggtc tgcttgccgg cgatgtatag tttcggggtg cggtcgatcg ggggaacgga
      301 tggacgggcg gacgggcgta caggcggtcg tttcgccggg cgttcggccg aaccgaccaa
      361 ctttccaacc gctcgcctag ccgtctttcc gtctgtccgc ctgaccgcct gaccgcccgt
      421 tctcctgtcc gcccaccgca catactccct gagcccctcc cgtcctccct cccgtccgaa
      481 cccgctctcc cgatacccac cgaagccgct cgccgcgtcg aagacattgg tgcagttgat
      541 ccacaccgta ccggccttga gctggggcgc gacatccaac gcaaggttga tgttctcggt
      601 ccagaggctg gctgccagcc cgtagcgagt gttgttggcg agttcgaccg cttcggccgg
      661 agtgcggaag gtcatgagca cgacgacggg gccgaagatc tccacctggg cgaccgtagc
      721 agcgggggag acttcggtca gcagggtcgg cgggaagaac cacccctccc gcggacagct
      781 ccacgttggc tgccagagct tggcgccttc ctcttcgccc cggcgtacca ggtcctggat
      841 cttctccagc tgaaccggcg cgatgatggc ccccatgtcc acggccttgt cgagcgggtc
      901 gcccaccctg agcgtctcca tccgctgctt gagtttggcc accaggcggt ccgtcacccc
      961 ttcctgcacc agaatgcgcg agcccgcgca gcacacctgc ccctggttga accagatcgc
     1021 gtcgaccacg ccttcgacca cgctgtcgag atcggcatcg ggaaagacga ggaacgggga
     1081 cttcccgccg agctcgagag agagcttctt cccgctgccc gctgtcgcgg ctcggatgat
     1141 ccgcccgacc tcggtcgaac cggtaaaggc gatcttgtcg atgtccggat gggccacgag
     1201 cgcctccccg gcccggccat cgccggtgat gatgttgacc acgccggcag gcaagccgac
     1261 ctcctgacac agctcggcaa agcggagcgc cgtgagcgag gtgaactctg ccggcttgag
     1321 cacgacggta ttccccatcg ccagcgccgg cgcgattttc caggccaaca tcagcagcgg
     1381 gaagttccag gggatgatct gtccgatcac gccgaccggc acgcggtcgg gcagctcctg
     1441 ctccatgagc tgagcccagc ctgcgtgatg atagaagtgc cgggccacga gcggcacgtc
     1501 gatgtcccgc gactcgcgga tcggcttgcc gttgtcgagc gattccagga cagctaagaa
     1561 ccggctgtgc ttctggacct gccgggcgat cgcgtacaga tgacgagccc gtccgtgccc
     1621 gccaagcgcc caccacgccg gttgagcccc acgagccgcg cgcacagcgc gatcgacctc
     1681 gctggcgctg gtctgggcga gacgggcgag gggtttgccg gtggccgggt tcagcgtttc
     1741 aaatgtctca cctttgcccg gcacccaggc gcccccgatg aacagcccga accggcgacc
     1801 gtgccgctcc agccactcgt tcaccggccc cagcgcttcg ggggccggac catacgccat
     1861 cgtctggaag atttcgggta cggatgccat aggtcccggg ttgtcatcct gagcgcagcg
     1921 aaggatccct caaatatgcg gagagatcct tcgctacgct caggatgaca gcagatgaga
     1981 tcatgccgag ggatgccggt gagcggctga ataccgtccc gtcacgaagt gctccagctg
     2041 gcgctcgatg tcggccagga gcgagctggc gccaaagcga aagaggtcgg ggcgcagcca
     2101 tcggtccccc agctcatcct taatcagcgc gagccagtcc agtgcctccc tggcggtgcg
     2161 gatcccgcct gccgccttga ggccgatgag gtggctggtg cgctcccggt agtcgcggat
     2221 ggcacgcgcc atgaccaacc ccacaggaag agtggcgttg acgctctcct tccccgtcga
     2281 agtcttgatg aaatcggcgc cggccatcat gcagacgagg ctcgcgcgcg ccacatttcg
     2341 cagggtgccc agctctcccg tggcgagaat ggtcttgatg tgcgcgtccc cgcaggcttc
     2401 ccgcatggcg cgcacctcat cgtagagggc ccgccagttc tcggtgagca cgtgcgcccg
     2461 ggtgatcacg acgtcgatct cctcggcccc cgcggccacc gacgcccgga tctcggcaat
     2521 ccgctgctcg aagggcgaga gacccgccgg aaacccggtc gataccgccg cgaccgggat
     2581 acccgagcct tccagggcgt cgagggcggt ctcgacgaat gtgtgataaa cgcaaacggc
     2641 cgcaacccgg atcgggagct gctcggcgtt catcgcgtgg agcaggtcag tgcgaaccgg
     2701 ccggcgcgcc ttggcacaga ggcgccgaac ccgcccggat gtgtcgtccc cggagagcgt
     2761 ggtgaggtcc atcagcgtga cggcacgtag tagccatgca gcctgccatt ccttcttcac
     2821 cgtccgccgg ttccgaagcg tcgccgcgcg ccgctccacc gcgctgcgat tgacccggac
     2881 ctcctcgacc cagtcgagct cgaggggcaa ccccgggttc cgtggggcca ccaacacgtc
     2941 cagtggcgcg gcaggcgaag gagaaagggt catcgctccc ggtacaccaa gtcttccgtc
     3001 gtgcgggcca atacccggtg cttggccacc agctccggat cgcggaaaag atgaatcatg
     3061 attgccccgg caatgaaccc gccggcatgg gcccagaacg cgacgccccc ctgctccccg
     3121 gacaggctgc cgcccaggag ctggatcgca aaccagtagc ccagcatcac gtaggccggc
     3181 accacgatgc gggtgatgaa gaagcccaga atcaccagca tgtggacccg gacgcgaggg
     3241 tagaggatga tatacgcgcc catcactccg ctgatcgcgc cggacgcgcc caccatcggg
     3301 atcgggctcg aaggattcat gtacgcttgg gtcgccgcgg cagccagccc gcagaggatg
     3361 tagaaggcga ggtaccgaat gtgtcccatg gaatcctcga cgttgtttcc gaagacccaa
     3421 agaaaccaca tgttgccgat gaggtggaac cagccgccgt gcaggaacat cgagctcaac
     3481 ggggtgatcc agctgcgccc ttcgccgagc acacagacgg ctgccgggcc cagcggaacc
     3541 ctgaatccgt cgggcagccg gccgagaaac tcgccaggga tgagacccag ctcgcagacc
     3601 gagcgggaca ggttcggctc ggcccccata ccctgcacca ccagccacac gaagacgttt
     3661 gcggtgatga acagcaacgt gacgaccgga gtcgccaacg tcgggttgtc gtctcggtag
     3721 gggaacatgg ctcaatatag ccgagcccgg agttgttact cggaaggagc ctcggtgttc
     3781 accagctccg gtttcctgac cggcggacgg gtgatctcct gatccagcga tggccggtcc
     3841 tgcttctcga acggctccag accgactggc tggcctgtgt cagccgagcg gtagagggcc
     3901 cggatgaccc ggacgtccgc cagtccttcc cagcctgacg gctccggggc cgcgccggtg
     3961 agaatgcact cagagaagct gaccagctcg ggggcgaact ggtctcgctt ggggaacttc
     4021 cgctcccggg tcttgccgtt gatcgtcacc cgctggacca gctcatccgc gtactcgtaa
     4081 gccgggtcca tgacgaggtc accgtcggtg cctacaaccc tgtaggtgga gacatcagcg
     4141 gctccgaagc tgcaggtaaa gcttgccagg cgctcccggc cggggaatcg gagaatcgcg
     4201 ctggtcatct cctcgcactg gcggaagcgg gggtcgccgt tgttggcgct gaaggccacg
     4261 acttccatcg gctccgcgcc gtagagattt cggacggcgt tgatgcagta aataccgatg
     4321 tcatagagcg ttccgcctcc gagctcacgc gggctcagcc ggatgtcgcc ttcctttacc
     4381 tgcatggtga agaccgagtc gaagagcctc gcgtcgccta gcttgccacc ttggaccagg
     4441 tcgatggcct tgagattggc ctcctcgaag tggagtcggt aggccaccat cagctttacc
     4501 ccattctcct cagccactcg gatcatggac aggcagtcct cttcggtcac cgccatcggt
     4561 ttctcgcaga ggacatgcac tccggcccgg gcagcccgct cggcataggg ccggtgaaga
     4621 tggttgggta gggcaatgta gaccgcgtcg acgaccccgc tgcgcaggca ctcgtcgtac
     4681 cgctcgtagc cgaagcgcgc cttgacctta taccggcggc caagcctctc cagcttttcc
     4741 ggatcgtccg agacgagggc ggccagctcg gagttctcgg cgtgagcgaa ggcgggcaag
     4801 accgccacct gggcaatgtg acccaggccg ataacggcgt aacggacttt ctcccggttc
     4861 tgtttggctg ctcggggcat cagtcgctcg aagttacggg ctatgggctt gcgatcagcc
     4921 catagccaat agccaatggc caatagcgct tactacagcg cgcgtctccc ctgaatcagc
     4981 tgcatcacgg ccatgatcac cgcaatcacg aggaggacgt gaataaaacc accgagagta
     5041 tatgacgtga caacacccag cagccacagc accaggagta tcacgaagat cgtccacagc
     5101 atggcaacct cctcacgttc gttgacccgg gtgaaacgcg acctcgaatg tcgccgtgac
     5161 cggcctgctt aaccgctgcc cacccacgta cctaccttat cgaccgccgg ggcgttccgt
     5221 cgtgattcaa gtcacgagtg agcccgggtc gtgatgtgcc aaaaaggcag ctaagggcgg
     5281 tatgccactt gctcaggcac ctacccaacc tcacgccggt ggccgaattg gcacccgcag
     5341 atgcactcgg atctcactcg gagtcgacat ggcttccaaa atcatcggta tcgaccttgg
     5401 aactaccaac tcggtcgtag cagtcatgga gggcggcgat cccgtcgtca tcccgaacgc
     5461 cgaaggcggg cggaccaccc cctcggttgt ggctttcacc aaggatggtg agcggctggt
     5521 gggtcaggtg gccaagcgcc aggcagtcac caatccgaaa cagacgatct tctcgatcaa
     5581 gcggctgatg ggccgccggt tcggcgaggt ccaggaagag gtcaaccggc tgccgtataa
     5641 ggtagtagag ggcccccacg gaatggccgc cgtggagatc cagggcaagc ggtacagccc
     5701 gcctgagatc tcggcgatga tcctccagaa gatgaagcag accgccgagg actatctcgg
     5761 ttacacggtc gaaaaggccg taatcacggt tccggcctac ttcaatgact ctcagcggca
     5821 ggcaaccaag gacgcgggta agatcgccgg gctggatgtg gtacggatca tcaatgagcc
     5881 taccgcctcc gcgctggcgt atggcctgga taagaagaag gaagagaagg ttgcggtcta
     5941 cgacctgggc ggcggcacct atgacatctc ggtgctcgag ctggccgagg gggtgttcga
     6001 ggtcaagagc accaacggcg acacccacct gggcggcgac gacttcgacc agcggctgat
     6061 cgaatggctg gtggcggagt tcaagaagga ccaggggatc gatctctcca aggatcccat
     6121 ggcgctccag cgtttgaagg aagcggcgga gaaggccaag atggagctct ccaccgtcaa
     6181 ccagaccgac atcaacctgc ccttcatcac ggctgaccag tcagggccca agcacctcaa
     6241 catgagcctg acgcgggcca agttcgagca gctggtggat gacctgatcc agcgcaccat
     6301 cccgcccatg cagcaggcgc tgaaggacgc ggggctcgat cccaagcgga tcgacgaagt
     6361 gatcctggtc ggtggttcga cccgcatccc gaagatccag cagatcgtca aggattactt
     6421 cgggaaggag ccgaacaaat cggtaaatcc cgacgaggtc gtcgccatcg gcgcggccat
     6481 tcagggcggc gtactgggcg gcgaggtaaa ggacgtgctc ctcctcgacg tgaccccgct
     6541 gtcgctgggc atcgagacgc tcggcggggt gacgaccgta ctcattccac gcaacaccac
     6601 gatccccacc aagaagtcgg agacgttctc caccgcggaa gacaaccaga ccacggtcga
     6661 gatccacgtg ctccagggcg agcggcagat ggcgcaggac aaccgcacca tcggcaagtt
     6721 ccagctcacc ggtatccctc cggcccctcg gggcatgccg caggtggagg tcgggttcga
     6781 catcgacgcc aacggcattc tgcacgtagc ggccaaagac aagaccacgg gcaaggagca
     6841 gaagatccgg atcgaagcct cgagcggcct gagcgagagc gagatcgatc gaatggtcaa
     6901 gaccgccgag caacacgccc aggaggacca ggcgcgccgg gagcagatcg aagctcgcaa
     6961 tcagctcgac agcctggtgt accgggtcga gaaggacagc aaggagtggg cggaccggct
     7021 gcccgcggat gccaagtcac ggctggagtc cgccctcgag gccggaagac aggctctccg
     7081 cacgggcgag accgaggcaa tccgccgcgc cctggacgag ctcaaccagg cgtactcggc
     7141 tgccggagcc tccctgtatc aggcggccgc tgccggcgcc gggaccggag ggactggtga
     7201 gccgagcggc ggcccgggcc agccgggtcc agggccgggt ggtcccgggg cggagtccgg
     7261 tgcctccccg gacgatgttg tcgaggccga ttacgagatc gtggacgaca agaagtgacc
     7321 ggcgggtacc gccggtcacc ctgaggcgaa tatcgccgaa ggggttaaag cttgagggaa
     7381 ggggccggag cggcagcgaa ggggccggag tccagtttcc ggccccttcg catgctcagc
     7441 gcaggctctt caggggtgcc aagcggttcg gtcgaaactc actcttgtcc catgtg
//
LOCUS       DASYRV010000061         2621 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2505102, whole genome shotgun sequence.
ACCESSION   DASYRV010000061 DASYRV010000000
VERSION     DASYRV010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2621
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2505102"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1264)
                     /locus_tag="VGQ24_01290"
     CDS             complement(<1..1264)
                     /locus_tag="VGQ24_01290"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HEV8453491.1"
                     /translation="MLDLRTLGGLDIASTGPLGKAASQPRRLALLAVLAEASERGVSR
                     DALIGLLWPEQIAESARHNLTQTLYALRRDLGAEDLFTGTSRLALNPTLLGCDLWKFR
                     RALQENDWDAAVKLYRGPFLSGVFINHTPEFDRWVEQARQNIAAEYARGIELLAGDLA
                     ARGEHAQAAALWRRLASFDPHNASVVMEIARQMRAAGDRAGALSIIHEFGTRLREDLA
                     LPLDAALIQLADSIRGELGHRPPPVVGQQVAAFHPDRASGAQEVRRGHPIHLSPLRRK
                     RQLLVLAAGGLAVATVLVVSAGRNRPISSPSGTTSVAVLPFEVHGDSAAGFLRDGMAR
                     LVAQGLDGVGRVRAALYPTVGPLLDRAESAADTSGAMGRRFRIDRYVAGDVTLVGTTI
                     QVRAVLHDVSKRGATLGTALVTGSRDSLF"
     gene            1409..>2621
                     /locus_tag="VGQ24_01295"
     CDS             1409..>2621
                     /locus_tag="VGQ24_01295"
                     /inference="COORDINATES: protein motif:HMM:NF013507.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEV8453492.1"
                     /translation="MARSAFVRALGLAGVSALVAACGQEQAGPSEQPAISLLIVSGDG
                     QSAVVGTELVNPLVIKATDSKGKPLIGMTVNFRVTGGGGSVFAGAAITDIKGVAEDYW
                     TLGTSSVQSQTLEVRAVSSTGEKQVFGVFTANALAAAAAQVVVQAGDGQIALHGTSVP
                     ISPAVLITDQYGNPVPNHPVTFSLGLGGGSITGAATTTNANGIASVGSWTLGPTVCPN
                     SLTATAAGGGINGNPVSFSATGGDCWTILPGMPTVRQNLAGGVVNGLVYAVGGFNVAP
                     AATLEAFNPGTNSWAARVSMPTGRYGLSAGVVNSTLYAVGGSAVNNGPPLDVMEAYDP
                     ASNLWTTKAPMPTPRRFLAIGVVNGILYAVGGVDGAGATGTVEAYDPATNTWTAKAPM
                     PTPRSQLAVGVV"
BASE COUNT          470 a          826 c          882 g          443 t
ORIGIN      
        1 cgaagaggct gtcccgggaa ccggtcacca gggcggtgcc cagtgtcgct ccgcgctttg
       61 agacatcgtg gagcaccgcg cggacctgga tggttgttcc caccagagtg acgtctcccg
      121 cgacgtagcg atcgatgcga aacctccggc ccatcgcgcc cgaggtatca gcggcggact
      181 cggctcgatc gagcaacgga ccaaccgtgg gatagagcgc ggcccggacc cggccgacgc
      241 cgtcaaggcc ttgtgcgacc agccgcgcca tcccgtcacg gaggaatccc gctgccgagt
      301 cgccgtggac ctcgaacggc agcacggcaa cggacgtggt tcccgacggg gagctgatcg
      361 gccggttacg ccccgcggag acgaccagta cggttgcgac cgccaaaccc ccggccgcca
      421 gcacgagaag ctgccttttg cggcggagcg gggaaaggtg gatggggtgg ccccgcctga
      481 cctcctgagc tccggacgct cggtccggat ggaacgcggc gacctgctgt ccgacgacag
      541 gcggtgggcg atggccgagc tccccacgaa tcgaatcggc gagctggata agggctgcat
      601 ccagaggaag ggcaagatcc tcgcggagac gcgtgccgaa ctcgtgaatg atgctgagcg
      661 ctccggcacg atcccccgcc gcgcgcatct gtcgtgcgat ctccattacg acgctggcgt
      721 tatggggatc gaacgacgcc agacggcgcc agagcgccgc ggcttgggcg tgttcgcctc
      781 tcgcggcaag gtcacccgcc agcagctcga tgccgcgcgc atactccgca gcgatgttct
      841 ggcgtgcctg ttccacccag cgatcgaatt ccggcgtgtg gttgatgaag acgcccgaca
      901 ggaaagggcc gcggtagagc ttcaccgccg cgtcccagtc gttctcctgg agggcgcggc
      961 gaaacttcca tagatcgcaa cccaatagtg tggggttgag cgccaggcgg gaggtcccgg
     1021 tgaagaggtc ctcggcaccg agatcccgcc ggagcgcgta gagggtttgg gtcaggttgt
     1081 gccgagcgct ctcggcaatc tgctccggcc acaagagtcc gatgagcgcg tcccggctta
     1141 cgccgcgctc cgacgcctcg gccagaacgg caagcagtgc caggcggcga ggctgtgagg
     1201 cggccttccc gagcggcccg gtggacgcga tatcgagccc gcccagcgtc ctaaggtcaa
     1261 gcatgccaat tcgatgagaa accggtgagg atcgggtgac ggaagatgcg tattgtactg
     1321 gttgtcctgg cgcgcagcaa gcaattccgt tcccgccacg aagatcctgt gtccagcctc
     1381 atatagacct ttcgccaatg gagtgtgtat ggcgcgatcc gccttcgttc gtgccctcgg
     1441 tttggcaggt gtcagcgctc tcgtcgccgc ctgcggccag gaacaagccg gtccatcgga
     1501 gcaaccagcg atttcccttt tgatcgtctc gggggacggc caatctgcgg tggtcggtac
     1561 cgagttggtg aaccctctcg tgatcaaggc gaccgacagc aaaggcaagc cgctcattgg
     1621 gatgacggtc aacttccggg taaccggtgg aggcggaagc gtctttgctg gggcggcgat
     1681 taccgacata aagggcgttg ccgaggacta ttggaccctc gggacgtcga gtgtacagtc
     1741 gcaaacgctc gaggtcaggg cggtatcgtc tactggggaa aaacaggtct tcggagtctt
     1801 caccgccaat gcgctcgcag cagcggcggc ccaagtcgta gtccaagcgg gtgacgggca
     1861 aatcgccctc cacggaacca gcgtgccaat ctcgccggcg gttttgatca ccgatcagta
     1921 cggtaacccg gtgccgaacc acccggtgac cttttcgctt ggtctgggag gaggttccat
     1981 cacgggcgcc gcgaccacca ctaacgcaaa cggcatcgcg tcggtcggat cctggacgct
     2041 cggcccgacc gtctgcccga attccttgac cgccactgcc gctggtggcg gaatcaacgg
     2101 gaacccggtg tcgttcagtg cgacgggtgg cgattgttgg acgattcttc ccggaatgcc
     2161 cacagttcgc cagaacctcg cgggaggcgt cgtgaacggg cttgtgtatg ccgtgggcgg
     2221 gttcaacgta gcgccggcag cgaccctgga ggccttcaat cccggcacga attcttgggc
     2281 ggctagggtc tcgatgccga cggggcgata cggtctctca gcgggtgtgg tgaacagcac
     2341 gctgtacgcg gtcggaggaa gcgctgtaaa caacggcccg cccctggatg tcatggaggc
     2401 gtacgaccct gccagcaact tgtggacaac caaggccccg atgccgacgc cccgcaggtt
     2461 tctcgcgatc ggcgtcgtga acggcatcct ctacgccgtc ggtggagtgg acggtgctgg
     2521 agccaccggt acggtcgagg cttacgatcc agccacgaat acctggacgg ctaaggcgcc
     2581 gatgccgacc ccgcggtccc agctcgccgt gggcgtcgtg a
//
LOCUS       DASYRV010000062         8653 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2713623, whole genome shotgun sequence.
ACCESSION   DASYRV010000062 DASYRV010000000
VERSION     DASYRV010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8653
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2713623"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..322)
                     /gene="yajC"
                     /locus_tag="VGQ24_01300"
     CDS             complement(<1..322)
                     /gene="yajC"
                     /locus_tag="VGQ24_01300"
                     /inference="COORDINATES: protein motif:HMM:NF014725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEV8453493.1"
                     /translation="MILQNGSGSGLPMLVLQMVGIGLVFYFLILRPSGQARKRHAELL
                     SRLKKGDEVMTSGGIIGKVRDIKEVDANGVKEVRVTVESGTASVVVERSRIVRVGDST
                     GPVPP"
     gene            complement(330..1514)
                     /gene="tgt"
                     /locus_tag="VGQ24_01305"
     CDS             complement(330..1514)
                     /gene="tgt"
                     /locus_tag="VGQ24_01305"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEV8453494.1"
                     /translation="MFEFNVQGRQGAARAGILTLPHGEVQTPAFMPVGTHAVVRGLSA
                     ADVRRTGAQIILGNTYHLHLRPGEEVVHTMGGLHRFTTWTGPMLTDSGGFQVFSLHGL
                     RSIAEHGVEFQSHIDGTMRTLTPERAIDIQWRLGADVAMAFDHVVPGQSSAELACEGM
                     ERTLRWLVRCKARHAALVDGWTDGQMDGETASVRPSARPPVHQTLWPIIQGGIHDELR
                     MRSLEGTLERGPWTGIAIGGLSVGEPKPLMHHILQQLEPALPVEIPRYLMGVGFPADL
                     LESIARGVDLFDCVAATRNGRHGTAWLPNGRINVRGSGLKGSTEPLDPTCDCETCTTY
                     PRGYLRHLFMVEDMLGLRLVSIHNIRFLVRLGEQARAHILNGTFDGWSRRWLSRHYAR
                     ED"
     gene            complement(1531..2076)
                     /locus_tag="VGQ24_01310"
     CDS             complement(1531..2076)
                     /locus_tag="VGQ24_01310"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEV8453495.1"
                     /translation="MTFSNPAGNAPAAASGYVRALLDLLGPGNPIDVLGELLPWLDHR
                     LRGVADATLRRPEKPGKWSVIEAIQHLADSDLVAGFRTRMVLSEDRPALQGYDQDRWA
                     SEFRYRDVNLSQALDQLRGLRMANLHLWKHLTPAQLERVGLHSERGPESAGHIIRLMA
                     AHDLVHRRQIDRIFAAAGVRA"
     gene            complement(2090..3169)
                     /gene="queA"
                     /locus_tag="VGQ24_01315"
     CDS             complement(2090..3169)
                     /gene="queA"
                     /locus_tag="VGQ24_01315"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEV8453496.1"
                     /translation="MTPEGFRTSDFDYHLPPELIAQEPLPDRSGSRLLAVLRNNKVER
                     LPGTRTTAGAAELVDARFFDLPTIIPAGDLLVLNTTRVRHARLLGTRQSGAPAEILLI
                     HPASDGDWVALGKPGSALRPGKRVTLAPDAAVETVGVLPDGNRLVRFIGLTADAAIRR
                     YGRLPLPPYISRAPTELDESRYQTVYARLEGSVAAPTAGLHFTPWLLEHLAEAGVLVE
                     GLDLQVGPGTFQPVEIEDPAAHEMHPERYEIPSALASRVAAVRTAGGCVWAVGTTVVR
                     ALESAARADRTVQPGAGETRLMITPGYNFRLVDRMLTNFHLPRSTLLMLVSAFAGHRL
                     TMAAYQHAIEQRYRFYSYGDAMVII"
     gene            complement(3159..4184)
                     /gene="ruvB"
                     /locus_tag="VGQ24_01320"
     CDS             complement(3159..4184)
                     /gene="ruvB"
                     /locus_tag="VGQ24_01320"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEV8453497.1"
                     /translation="MTKLQVTTPEALPEETGADAVLRPSRLDEFIGQGQVKASLQIAI
                     DAAKRRGESLDHTLFFGPPGLGKTTLAMLMAREMGVQVRTTSGPVLEKPGDLVGLLTS
                     LAAGDILFIDEIHRLKPALEEFLYPAMEDFRVDVRIAEGPNAQTIPMTLEQFTLIGAT
                     TRFGLLTPPMRARFGIVERLGYYPADELEQIVTRSAGILAVPMDGEGAVEIARRSRGT
                     PRVANRLLRRVRDYAEVKADGRITVDVASTALARLNVDEFGLDDMDARILTTIIQKFG
                     GGPVGLGTVAVAVGEDAGTLQDVYEPYLIQQGFLERTQRGRCVTPLAYRRFGLTPPAG
                     QATIFDA"
     gene            complement(4318..4494)
                     /locus_tag="VGQ24_01325"
     CDS             complement(4318..4494)
                     /locus_tag="VGQ24_01325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453498.1"
                     /translation="MLRAATTAEWICTRCGATNRKLVAKGTAEIADRCVTCHTGHLVQ
                     PDIRPVRWNARLEE"
     gene            complement(4499..5098)
                     /gene="ruvA"
                     /locus_tag="VGQ24_01330"
     CDS             complement(4499..5098)
                     /gene="ruvA"
                     /locus_tag="VGQ24_01330"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00084.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEV8453499.1"
                     /translation="MIATLTGLLAEREAEMLVVQTDGGVGYAVTVPVGVAARLPARGT
                     RISLFTELVVKEDGWALYGFDTGTERHVFRHLLTASGFGPKLALALLSALGPERTVRS
                     ILSRDLTTLSSVSGIGRKKAERLVLELQDRFSDIVIERPSVRLPGSEEAVRALMGLGY
                     GVAAADDAVRAALAEGAPAEAPQLIRRALQQLATTRGST"
     gene            complement(5095..5607)
                     /gene="ruvC"
                     /locus_tag="VGQ24_01335"
     CDS             complement(5095..5607)
                     /gene="ruvC"
                     /locus_tag="VGQ24_01335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEV8453500.1"
                     /translation="MKVLGIDPGTAVLGYGVVESGSSRSHRLLECGTLTTPGRDPLPA
                     RLRVIHDGITALIARHTPDAVAVESAFYGRNVRTTVVLSHARGVILLAAEMAGVEIAE
                     YSPASVKKTIVGKGGALKPQVGYMVAQLLHLKTPPAPEDAADGVAVALTHLMIATRQA
                     ALFRRAAPTR"
     gene            complement(5618..6367)
                     /locus_tag="VGQ24_01340"
     CDS             complement(5618..6367)
                     /locus_tag="VGQ24_01340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEV8453501.1"
                     /translation="MAGHSKWKQIKRKKAITDAKRASSWTKVIREITVAARSGGGDPG
                     GNPRLRTAIDAAKAVNMPGENIDRAIKKGTGELEGSVYDELTYEGYGPGGAAIFIEAT
                     TDNPNRTVAEIRYAFSRNGGNLGASNSVAWMFDRKGQIYLDAGRHNEDSALEAALESG
                     AEDFAREGDQYIVTTTPPMFHAVQDALRARGLTLDSVELAMVPRNTVRVEGADAERIV
                     RLMDVLEELDDVSKVFSNFDIDAAQLAEAEA"
     gene            6516..6935
                     /locus_tag="VGQ24_01345"
     CDS             6516..6935
                     /locus_tag="VGQ24_01345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453502.1"
                     /translation="MAGLVLLACRSESRDSQPPPPDFAKAFSTLPLPREPELVSRAGS
                     ADALQLTLHSPAGLDEVTEYYRTVLSNTPWRLVSDTKNPDGSTVLYAEHNGPPLWVRI
                     WKLGDRGTMVELTGAVVAKDTTKAKPAVPKAASKQGK"
     gene            complement(6938..7756)
                     /locus_tag="VGQ24_01350"
     CDS             complement(6938..7756)
                     /locus_tag="VGQ24_01350"
                     /inference="COORDINATES: protein motif:HMM:NF015736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaB-like helicase C-terminal domain-containing
                     protein"
                     /protein_id="HEV8453503.1"
                     /translation="MAQIDARTGGAPASDTVATGFASLDRMLAGGLRRKDLVVLGGDV
                     GSGKSALGLGVAMRAAGAGVPTLYFSGEMGPERLMERALAIAGRTSIDDLRQGRLDDA
                     TRSTVGAAALKLRHQPLVVRPMLGADPDEVRSALDMVPRRQLLVVDSLQLTAPPRLAS
                     RLEERVALSVRALKALAVERDLVVLVTAQLPGLRASRPDPRPTLEDLGGYGAIKQNAD
                     LILMIFREEMYRPGQGVEGATELIVAKNRNGPTGFVDLYFYPKWLRFVDMLDAD"
     gene            complement(7834..8211)
                     /locus_tag="VGQ24_01355"
     CDS             complement(7834..8211)
                     /locus_tag="VGQ24_01355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453504.1"
                     /translation="MNGWDPAATALLTLLPQTGRGPKRGGIFALWLTVRVAQDLLGDS
                     PPPERAHRRRVQALEQRLTSLTMPPPLRRALAAAVSQLRDVRPETAAQVLSQLVAPAR
                     ETSGAEAGEAVAMAARLARQSLR"
     gene            complement(8208..>8653)
                     /locus_tag="VGQ24_01360"
     CDS             complement(8208..>8653)
                     /locus_tag="VGQ24_01360"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEV8453505.1"
                     /translation="PLEYWRALVSQIISGGSSVAIVGGPGDSRLGASLAGSGHDQVAS
                     AAGAFGLQTTGALLRRSAAVVSGDTGVMHMATGVGTPVVALYGPTVEPFGFFPYTHRA
                     TVLEVALSCRPCSSQGGPHCPLGHHRCMLELRPDLVYDTVRRSIA"
BASE COUNT         1483 a         2891 c         2826 g         1453 t
ORIGIN      
        1 aagggggaac cgggccggtg gagtctccca cccggacaat tctggagcgc tcgaccacca
       61 cgctggcagt cccactctcg accgtgaccc gcacctcctt gacgccgttg gcgtcgactt
      121 ccttgatgtc ccgcaccttc ccgatgatgc cgccgctggt catgacctca tcacccttct
      181 tgagcctgga taacagttct gcgtgccgct ttctcgcctg acctgagggg cggagaatca
      241 ggaagtagaa gaccagccca atgcccacca tttggagcac cagcatgggg agcccgctgc
      301 cggagccgtt ctggagaatc acaggaacct cagtcctctc gagcgtaatg gcggctgagc
      361 caccggcggc tccagccatc gaaggtgccg ttcaggatat gcgcccgggc ctgttcaccc
      421 aagcgtacca ggaaccggat gttgtgaatc gagaccaggc gcagcccgag catgtcttcg
      481 accatgaaca ggtgccggag ataaccgcgc ggatacgtgg tgcaggtctc acaatcacag
      541 gtgggatcga gcggctcggt cgagcccttc agccccgagc ccctcacatt gatccggcca
      601 ttcggcagcc aggccgttcc gtgccggccg tttcgcgtgg cagccacgca gtcgaacaga
      661 tcgaccccac gcgcgatgct ctccaacaga tcggccggaa agccaacccc cataagataa
      721 cgggggatct ccaccggcag ggcgggctcc agctgctgga gaatgtgatg catcagcggc
      781 ttcggctcgc ccacggacag cccgccaatg gcgatgccgg tccagggacc gcgctcgagc
      841 gtgccctcga gtgagcgcat gcgcagctcg tcgtggatgc cgccttggat tattggccag
      901 agcgtttgat ggacgggcgg acgggcggac gggcggacgg acgccgtctc tccgtccatc
      961 tgtccatccg tccatccgtc caccagcgct gcgtgccttg ccttgcaccg aaccagccaa
     1021 cgaagcgttc gctccatgcc ttcgcacgcg agctctgccg aggactgccc gggcacgaca
     1081 tgatcgaagg ccattgcgac gtcggccccg agccgccact ggatatcgat cgcccgttcc
     1141 ggcgtgagag ttcgcatcgt gccatcgata tgactctgaa actcgacccc gtgttccgcg
     1201 atgcttcgga gtccgtgaag cgagaagacc tggaacccgc ccgagtcggt gagcatgggg
     1261 ccagtccagg tagtaaaccg atgaagccct cccatggtgt gcacgacctc ttcgcccggc
     1321 cgcagatgca gatggtacgt gttccccaga atgatctgag cgccggtacg gcgcacgtca
     1381 gccgcgctga gtcctcggac caccgcgtgc gtgcccaccg gcatgaacgc cggggtctgc
     1441 acctcgccat gcggcaaggt gaggatgccg gcccgggccg ctccctgcct gccctggacg
     1501 ttgaactcga acatcaagcc agtcccacgc tcatgctcga acgccggccg cggcaaaaat
     1561 ccggtcgatc tgccgccggt ggaccaggtc gtgcgccgcc atgagccgaa tgatgtgccc
     1621 tgcgctctcg ggcccgcgct cgctgtgcag ccctacccgc tccagttggg ccggggtcag
     1681 gtgcttccag agatgaagat tggccattcg caaaccacgc agctggtcga gagcctggct
     1741 caggttgaca tcgcgatagc ggaactcgct ggcccagcgg tcctgatcgt agccttgcag
     1801 ggcggggcgg tcctccgaca gcaccatcct ggtccggaac cccgcgacca ggtcgctatc
     1861 ggcgagatgt tggatggctt cgatgacgga ccactttcct ggcttttcgg gacggcggag
     1921 cgtcgcgtcg gctacgccgc ggagccggtg gtcgagccag ggcagcagct ccccgaggac
     1981 gtcgatcggg ttgcctgggc ccagtaggtc cagcaacgct cgtacgtagc ctgaggcggc
     2041 ggccggagcg tttccggcag ggttggagaa ggtcatgact ggccccggat cagatgatca
     2101 ccatcgcgtc gccataggag tagaaccgat accgctgctc gatcgcatgc tggtaggccg
     2161 ccatcgtaag tcggtgtccc gcaaaggcgc tcaccagcat cagcagcgtc gatctcggca
     2221 ggtggaagtt ggtcagcatg cgatcgacca ggcgaaagtt atagccgggg gtaatcatga
     2281 gccgggtctc ccccgctccc ggctgcaccg ttcgatcggc gcgggccgcg ctctccaggg
     2341 cgcggaccac ggtcgttccc acggcccaca cacatccccc cgccgtgcgc accgcggcaa
     2401 cccgggaggc gagcgcggat ggaatctcat accgctctgg atgcatctcg tgtgcggccg
     2461 gatcctcgat ctcgaccggc tggaaggtgc cgggcccgac ctggagatcc agaccttcta
     2521 ccagcactcc cgcttccgcc aggtgctcga gcagccaggg ggtgaagtgg aggccggccg
     2581 tgggtgcagc cacgcttcct tccaggcgag cgtagaccgt ctgatagcgt gactcgtcca
     2641 gctccgtcgg ggctcgcgag atgtacggcg ggagtggcag tcgcccgtac cgccggatgg
     2701 ccgcgtccgc ggtcaatccg atgaagcgga cgaggcggtt gccgtccggg agcaccccca
     2761 ccgtctcgac cgcggcgtcg ggcgccagcg tcacccgctt gcccggccga agagcgcttc
     2821 ccggtttgcc gagggccacc cagtcgccgt ccgacgcggg atggatcagg agaatctccg
     2881 ccggcgcgcc cgattgccgt gtgcccagca gtcgtgcgtg acgcactctg gtggtgttga
     2941 ggacgaggag gtcgccggca ggaattatgg tggggaggtc gaagaaccgg gcatccacca
     3001 gctcagcggc gcctgcggtt gttcgggtgc cgggcagtct ctccaccttg ttattacgca
     3061 agacagccag aagccggctc cccgaccgat cgggcaaggg ctcctgtgcg atcagctctg
     3121 gcgggagatg gtagtcgaag tcggaggtgc ggaagccttc aggcgtcaaa gatcgtcgcc
     3181 tgtccagctg gcggcgtcag accaaagcgg cggtaggcca gcggtgtcac gcagcggccg
     3241 cgctgggtgc gctccaggaa gccctgctga atgagatacg gttcataaac gtcctgcagt
     3301 gtgccggcat cttcgcccac ggcaacggcg acggtgccga gaccgaccgg gccaccgccg
     3361 aatttctgga tgatagtggt gaggattctg gcgtccatat catccaggcc aaactcgtcc
     3421 acattgagcc gggcgagcgc cgtggacgcc acgtctaccg tgatccgccc gtcggccttc
     3481 acctcggcgt agtcccgcac ccggcgcagc agccggttgg ccactcgtgg ggtaccccgg
     3541 ctgcgccggg cgatctcgac cgcaccctcg ccatccatgg ggaccgcgag gattccggca
     3601 gagcgggtca cgatctgctc gagctcatcg gcgggatagt agccaagccg ctcgacgatc
     3661 ccgaatcgtg cccgcatcgg cggggtgagg aggccaaagc gggtggtggc gccgatgagg
     3721 gtgaattgtt ccagcgtcat cggaatcgtc tgggcattgg gtccctcggc gatccgcacg
     3781 tccacccgga agtcctccat cgccggatag agaaactctt ccagcgccgg cttcaaccgg
     3841 tggatctcgt caatgaagag gatgtcgccc gcagcaagcg aggtaagcag tccgacgagg
     3901 tcaccgggct tctccagcac cggcccggac gtggtccgga cctgaacgcc catctcgcga
     3961 gccatgagca tggcgagggt ggtcttgccc aggccgggcg gaccgaagaa caaggtatgg
     4021 tccagtgact ccccccgccg cttggctgca tcgatggcga tctgaagcga cgccttgacc
     4081 tggccctgtc cgatgaactc atccagccgc gagggccgga gcaccgcatc ggcgccggtt
     4141 tcttcgggca aggcttcggg cgtggtgact tggagtttgg tcatggctgg aaggtaagag
     4201 gtgaggggta cgaagtgaga gggcgagtgc caaccttcct catcctgagc gaaagcgaag
     4261 gatgaggaga ggctttgcga cgtcctcaat tccatctcac ctctaacctc tcacctctca
     4321 ctcttcaagc cgcgcattcc agcgaaccgg gcggatgtcg ggctgcacca ggtgtcccgt
     4381 atggcaggtg acgcatcggt cggcaatctc agccgtgccc ttggcgacga gcttccggtt
     4441 cgtggcgcca cagcgggtgc agatccattc ggcggtcgtg gcggctcgta gcatcggctc
     4501 aggtactccc tcgagtagtg gcaagctgct gaagcgcacg ccggatgagc tgcggtgcct
     4561 cagctggggc cccttcggca agggcggccc gaaccgcatc gtcggccgcc gccaccccgt
     4621 agcccaggcc catgagcgca cgcaccgcct cctcggagcc gggaagccgc acgctcggac
     4681 gctcgatcac gatgtcgctg aaacgatcct gtaactccag caccagtcgc tcggccttct
     4741 tccgtccgat cccgctgact gagctcagcg tggtcaggtc gcgtgacagg atgctgcgta
     4801 ccgtgcgctc cgggccgagc gcggagagta gcgcgagcgc cagcttgggg ccaaagccgc
     4861 tggcggtcag caagtggcgg aagacgtgcc gctccgtccc ggtgtcgaac ccgtagagcg
     4921 cccatccatc ttcttttacc acgagctcgg taaaaagact gattcgggta ccccgggccg
     4981 gcagccgggc ggccactccg actggcacgg ttaccgcata gccgacgcca ccgtcggtct
     5041 ggaccacgag catctcggcc tcacgctcgg cgaggaggcc ggtcagcgtg gctatcatcg
     5101 ggtgggggcg gcccggcgga agagcgccgc ctgacgggtg gcgatcatca agtgggtgag
     5161 tgccacggcc acaccgtcgg ccgcgtcttc gggcgcgggt ggcgtcttca agtggagcag
     5221 ctgcgccacc atgtatccga cctgtggctt cagggcaccg ccctttccca cgatggtctt
     5281 cttcaccgac gcaggggagt actccgcgat ctcgaccccc gccatttcgg cggccaacag
     5341 gatcactcca cgggcatggc tcagcacgac tgtggttctg acatttcgcc cgtagaaggc
     5401 gctctcgacc gcgacggcat cgggcgtgtg ccgggcaatc aaggccgtga tgccatcgtg
     5461 gatgacccgg aggcgggcgg ggagaggatc gcgtcccgga gtggtgagcg ttccgcactc
     5521 cagcagccgg tggctccggc tcgatccgct ctcgactacg ccatatccca gaacggctgt
     5581 tcccggatcg atcccgagca ctttcaccgg cgttgcctca ggcttcagcc tccgccagtt
     5641 gggctgcgtc gatatcgaag ttggagaaga ccttcgagac gtcgtcgagc tcctccagca
     5701 catccatcag ccggacaatg cgctcggcgt cggctccttc gaccctcacg gtattgcggg
     5761 gaaccatggc cagttcaacg gagtcgagcg tcaggccccg ggcacggagt gcgtcttgca
     5821 ccgcgtggaa catcggtggg gtcgtggtca cgatgtactg gtcgccctct cgggcaaaat
     5881 cttcggcccc gctctcgaga gccgcttcca gagcgctgtc ctcgttgtgc cggccggcat
     5941 cgaggtagat ctgtcccttg cgatcgaaca tccaggcgac cgagttgctg gcaccgaggt
     6001 ttccgccgtt ccggctgaag gcgtagcgga tctcagccac ggtgcgattg gggttgtcgg
     6061 tggtggcctc gatgaaaatc gccgctcccc caggaccgta gccttcgtag gtcagctcgt
     6121 cgtagacact accctccaac tcgccggtgc ccttcttgat ggcccggtcg atgttctcgc
     6181 ccggcatatt gaccgctttg gccgcatcga tcgcggtgcg cagacgagga ttaccgccag
     6241 gatcgccgcc gccgctccgg gccgcgaccg tgatttcccg gatgacctta gtccaggagg
     6301 aagcgcgttt ggcgtcggtg atcgccttct tgcgcttgat ctgcttccat ttgctatggc
     6361 cggccatggc cgaactcctt ggggatcacc aggtttggat gactgcggat gggtcggtgc
     6421 ggcatgcgga aacataaggg ccacacccgc ttgcggcaac gcgcggactc cactagtctc
     6481 accgctctat gccctcattc cgactcgtgt tgagtatggc cggtctagtc ctgttagcct
     6541 gccgctcgga atcccgcgac tctcagccac caccgcccga tttcgccaag gcgttctcca
     6601 ccctgccgct gccgcgggaa ccggagctgg tctcgcgcgc cggcagcgcg gacgcgcttc
     6661 agctcacctt gcacagccct gccgggctag acgaagtaac ggagtactat cggaccgtgc
     6721 tgagcaacac gccctggcgg ctggtgagcg acaccaagaa tccggatggc tcgacggtgc
     6781 tctatgccga gcacaacggt cctccgctgt gggttcggat ctggaagctg ggcgaccggg
     6841 gaacgatggt cgagttgacc ggagcagttg tcgccaaaga caccaccaag gccaagcccg
     6901 cagtgccgaa ggccgcttcc aagcaaggga agtgacgcta gtcggcgtcc agcatatcga
     6961 cgaacctgag ccacttggga tagaagtaca ggtccacaaa cccggtcggc ccgttccgat
     7021 tcttcgcgac gatcagctcg gtagcgccct ccaccccctg gcccggccgg tacatctcct
     7081 ctcgaaaaat catcaggatc aggtctgcgt tctgcttgat cgccccgtag ccgccgagat
     7141 cctccaaggt gggccgggga tcgggacggc tcgcgcgaag gccgggcagc tgggctgtca
     7201 cgagcacgac caggtcccgt tctacggcga gggccttcag ggcacgcacg gatagggcga
     7261 cccgctcctc caatcgtgac gcaagacgag gcggcgcggt aagctgaagc gaatcgacca
     7321 cgagcagctg gcgacgggga accatgtcga gcgcggatcg aacctcatcc ggatcggcgc
     7381 cgagcattgg tcgaaccacc agaggctggt ggcgaagctt cagcgccgct gccccaacgg
     7441 tcgaacgggt ggcatcgtcg agccggccct gacgcaagtc gtcgatcgag gtgcggcccg
     7501 ctatggcaag tgcccgctcc atgagccgct cggggcccat ctcgcccgag aaatacagcg
     7561 tgggcacacc ggcccctgcc gcgcgcatcg cgacacccag cccgagcgcg gacttgccgc
     7621 tccccacatc gcctcccaga acaacgagat ccttccgccg aagccctccc gccagcatcc
     7681 ggtcgagcga ggcaaagccg gtggccaccg tatcggaagc gggagcaccg ccggtgcgtg
     7741 catcgatctg tgccaccagt ttctcgagcg tcgagtctgc ggaccgttcg gagcgcttgg
     7801 gagtgcgagg catcactcag tataccggtt ctgtcagcgc agggattgcc gggcgagccg
     7861 tgcggccatg gccaccgcct cgcccgcttc cgcgccgctg gtttcgcgcg ccggagcgac
     7921 gagctggctc agcacctgag cggcggtctc cggccgcacg tcgcggagct gactcaccgc
     7981 ggcggcgagc gcccggcgca ggggcggcgg catggtgagg ctggtgaggc gttgctccag
     8041 cgcctgcact cgtcggcgat gggcccgttc cggcggcggc gaatccccca gcagatcctg
     8101 ggcgacccga accgtcagcc agagcgcaaa gatccctcca cgtttgggcc cccgcccggt
     8161 ctgcggcagc aacgtgagca gcgcggtggc cgcgggatcc catccgttca cgcgatgctc
     8221 cgtcggaccg tgtcgtagac cagatcgggc cggagctcga gcatgcagcg gtgatggccg
     8281 agggggcaat gagggccgcc ctgactgctg cacggccggc acgacagggc cacctccaat
     8341 acggtcgcgc ggtgagtata gggaaagaag ccgaacggct cgacggtggg gccgtagagc
     8401 gccaccaccg gcgtgccgac tccggtggcc atgtgcatga cgccggtgtc gccggacacg
     8461 actgccgccg accggcggag cagggcgccg gtggtctgca gcccaaaggc cccggccgca
     8521 ctcgccacct ggtcgtgacc cgagccggcg agagaggccc ccagcctcga atcgccgggc
     8581 cccccaacaa tcgccacgct ggatcctccg gagatgatct ggcttaccag cgcgcgccaa
     8641 tactcgagcg gcc
//
LOCUS       DASYRV010000063         3676 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3556799, whole genome shotgun sequence.
ACCESSION   DASYRV010000063 DASYRV010000000
VERSION     DASYRV010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3676
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3556799"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..376)
                     /locus_tag="VGQ24_01365"
     CDS             complement(110..376)
                     /locus_tag="VGQ24_01365"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HEV8453506.1"
                     /translation="MPAVPSAPPVIRIQLFARYAELLGATQLELPANGINNVRDVLER
                     LRALPGGAAIGAATLVAVNLRQAKPDAPVSPSDEVAVLPPLSGG"
     gene            complement(429..764)
                     /locus_tag="VGQ24_01370"
     CDS             complement(429..764)
                     /locus_tag="VGQ24_01370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEV8453507.1"
                     /translation="MTKADLVEQVTAAMARTSGPLISKKDCARVVDSFLDAIKSALKE
                     QHNIEVRGFGTFKIRRRKTRMARNPRTGEPVEVAARPVPVFKPSKELRALVADEPHEG
                     LDGPDEESE"
     gene            complement(853..1998)
                     /gene="carA"
                     /locus_tag="VGQ24_01375"
     CDS             complement(853..1998)
                     /gene="carA"
                     /locus_tag="VGQ24_01375"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEV8453508.1"
                     /translation="MNEAERGAPTSGRPAFVYLEDGSCFPGILHHQAEPAIGEVVFTT
                     NLTGYQETFTDPSYLGQIVVMTAPMIGNYGINGADLESERPQVSGVVVRELSRTASNW
                     RATGGLAEWLARAGIPVIEGVDTRRLTRHIRSRGAMRGLIAEGDAPTRALLDRLLAAP
                     SMEGLDLATQASTRTAWSEGERGPHVVAYDFGMKRNIVRMLTDSGCRVTVVPSETTAA
                     EVRALSPDGLFLSNGPGDPAVLGGAIANVRELANSGLPTFGICLGHQLLGLAFGGRTV
                     KLPYGHRGGNHPVRDIATGKVLITVQNHGFSVEGTPDGIPGAPDLEVTHVNLNDGPVE
                     GLRHKALPVFAVQYHPEASPGPHDAHPHFAEFLELMASGMGSKHATS"
     gene            complement(2001..2381)
                     /gene="secG"
                     /locus_tag="VGQ24_01380"
     CDS             complement(2001..2381)
                     /gene="secG"
                     /locus_tag="VGQ24_01380"
                     /inference="COORDINATES: protein motif:HMM:TIGR00810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEV8453509.1"
                     /translation="MLYNFLLILLIIDGLILAIAVLLQAGQGGGLASMGGGSTDLVLG
                     GRQAVTILHKASWVTGGLFMFLAILLSIVASQRTVGQTDVQRQLQAPVQQPLPAAPLQ
                     ANPPGGTTTPPPAPAPIPPAGKQP"
     gene            complement(2847..>3676)
                     /locus_tag="VGQ24_01385"
     CDS             complement(2847..>3676)
                     /locus_tag="VGQ24_01385"
                     /inference="COORDINATES: protein motif:HMM:NF019352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEV8453510.1"
                     /translation="GDRDRRFGYVLQRGAEPRRDSVEYPGPVLVLTRGEPTAIEVVNR
                     SGEPTAVHWHGIELESYYDGVAGWSGTPGRTAPAIRPGGRFEVRLTPRRAGTFMYHTH
                     LDELRQQYGGLVGPLVVLEPGERWNPTRDLVILLSDGVPQRVYINGSLTPAAKQLEVG
                     RTYRLRIADIAVFRQVLRVRLVRDSALLSWRPIAKDGFTLPPAQATVRPSVVNLPSGE
                     TADFEFTPDRPGEVALEVLGQPDLNLTLHGRLPFRVSPAAGDSGNSRSSSSRARSRR"
BASE COUNT          610 a         1231 c         1208 g          627 t
ORIGIN      
        1 tgatcccgca ccagcccgac gaagctgctc acaccgccgc gctcgggggc ggccaccgcc
       61 cgcaacagct cgttcagctc gagcgggcgc tgcgacaggt aagccaccgt caccctcccg
      121 acaggggtgg gagcaccgcg acctcatcgg acggtgacac gggcgcgtcc ggtttggcct
      181 gccgcagatt cacggcgacc agagttgcag ccccgatcgc ggctccaccg ggcagcgccc
      241 gcagccgctc cagcacatcc cgcacattgt tgatgccgtt cgccggaagc tcgagctgcg
      301 tcgcgccgag gagctcggca tagcgcgcga aaagttgaat gcggatgaca gggggggcgc
      361 tcgggacggc aggcatgact cccaaaataa gccgggcgcc ctttcgaggg cgcccggaag
      421 cgcttgcgtc actcgctctc ttcgtcaggc ccgtcgagcc cctcatgcgg ctcgtcggcg
      481 accagcgccc gcaactcctt gctgggcttg aagacgggca ccgggcgagc agccacttcc
      541 accggttcgc cggtcctcgg gttccgcgcc atacgggtct tgcgccggcg gatcttaaaa
      601 gtgccgaaac cccgtacttc gatgttgtgc tgctctttga gcgcgctctt gattgcatcc
      661 aggaatgaat ccacgacacg tgcacagtct tttttggaga tcagcggccc ggaagtgcga
      721 gccatcgcgg cggttacctg ctctacgagg tcggctttcg tcatgctccc cccagatagc
      781 ggaaccggac tggctatcac ccccagcgag aggcgtccgt tccgccgata gtaggagctt
      841 aacccttgtc tgtcaagagg ttgcgtgctt ggagcccatt ccggaggcca tcagttccag
      901 gaattcggca aagtgggggt gagcatcgtg cggtcccgga gatgcctcag ggtgatactg
      961 caccgcgaaa accggaagtg ctttgtgccg aagaccttcc acgggtccat cgttgagatt
     1021 cacatgggtg acctcgagat cgggcgcccc cgggatgcca tcgggggttc cctcgaccga
     1081 aaaaccgtgg ttttggaccg tgatcagcac ctttccggta gcgatgtcgc ggacgggatg
     1141 atttcccccc cgatggccat aggggagctt gacggtccgg cccccgaagg cgaggccgag
     1201 cagctgatgg ccgaggcaaa tcccgaaagt cgggagtcca ctgttggcga gctctcggac
     1261 gttggcgatt gcgccgccca gcacggcggg atctcccggg ccgttcgaca ggaagagccc
     1321 gtcgggactc agggcgcgta cctcggctgc ggtcgtctcg ctcgggacga ccgttactcg
     1381 gcaaccactg tccgtcagca tccgcacgat gtttcgcttc atcccgaagt catacgccac
     1441 cacatgggga ccgcgctcac cctcgctcca cgccgttcgc gtcgaggcct gagtcgccag
     1501 atcgagccct tccatcgagg gcgctgcgag caaccgatcc agcaaggccc gggtgggcgc
     1561 gtctccttcg gcgatgagcc cgcgcatcgc cccgcgcgag cggatgtgcc gggtgagtcg
     1621 ccgggtgtct actccctcga tgaccgggat gccggcgcgg gcgagccatt cggccagacc
     1681 tcccgttgcc cgccagttcg aagcggtccg ggagagttcg cgcaccacca ctccgctcac
     1741 ctggggtcgt tccgattcga ggtccgcgcc gttgatcccg tagttgccga tcatcggagc
     1801 ggtcatcacc acgatctgac cgaggtagct cgggtctgta aaggtctcct gatacccggt
     1861 gagattcgtg gtaaagacga cttctccgat ggccggctcg gcctggtggt gcaggattcc
     1921 tggaaagcat gacccgtctt ccagatacac aaaagcgggg cgtcccgagg ttggggcgcc
     1981 ccgctcagcc tcgttcacga tcacggctgc ttgccggccg gaggaatggg ggccggcgcc
     2041 ggaggcggtg tggtggtccc tcccggcggg ttcgcttgca gtggcgcggc gggcagcggt
     2101 tgctggacgg gcgcctgcaa ttggcgctgg acatcggtct gaccgacggt gcgctgggag
     2161 gctacgatcg acagcaagat cgccaggaac atgaacagcc caccggtgac ccagctcgcc
     2221 ttgtgcagga tggtcacggc ctggcggccg ccgagcacga gatcggtgct tccaccgccc
     2281 atcgaggcca agccgccgcc ctgtcccgcc tgcagcagta ccgcgatggc caggatgagg
     2341 ccgtcgatga taagcagaat cagcagaaag ttgtaaagca ttcggggaat tctagttgcg
     2401 tgccggagtt cggtcaatcc tcgagccagg tgctcaggct gaagagaaag gcgcccaagt
     2461 agaatgctca cacagctttg atgaccaccc accggattca cgctcgcggc gtgacgcgaa
     2521 ccagcaaatc cgcgtcgccc atcgttgggg cggcaagatc acccaccctc accgcctcat
     2581 tgctcccata tcggtcgata agtgctgcct tcataggggt tcctttggcc cgctacgtcg
     2641 ccacgagaat ttcggccgtt cagtggtgca agacgcggca ggagtaccga atactcttct
     2701 tcgcagctgc agcgctgtat gcttgcggcg acgttccgac ccatcccgtt ccagcgaatc
     2761 aggtgagtac atccgtcggt ctttaagcgg ccagatcccg gatcgctaca tcatcgtctt
     2821 ccggtccggc gtcagccgcg atcgggctat cgtctcgacc gcgctcgcga actcgatgac
     2881 ctcgaatttc cggagtcgcc ggccgcaggc gacacacgga acgggagccg cccgtgcagc
     2941 gtcaggttca aatcgggctg gcccaggacc tccagcgcca cctcgccggg gcggtcgggc
     3001 gtgaactcga agtccgccgt ctcgccgctc ggcaggttca cgacgctcgg ccgcacggtg
     3061 gcctgcgccg ggggcagcgt gaatccatcc ttggcgatcg ggcgccacga cagcagcgcc
     3121 gagtcgcgca ccagccggac gcgcagcacc tggcggaaga cggcgatgtc ggcgatgcgg
     3181 agccggtagg tccggcccac ctcgagctgc ttcgccgccg gcgtgagcga gccgttgatg
     3241 tagacgcgct gtgggacgcc gtcggagagc aggatcacca ggtcgcgcgt cgggttccat
     3301 cgctctccag gctccagcac gacgagcggc cccacgaggc ctccgtactg ctggcgcagt
     3361 tcgtctagat gcgtgtggta catgaacgtc cccgcgcgcc gcggggtgag gcgcacctcg
     3421 aatcgcccgc cggggcggat ggcgggggcc gtgcgccccg gcgtgccgct ccagccggcc
     3481 acgccgtcgt agtagctctc cagctcgatg ccgtgccagt ggacagccgt cggctcgccg
     3541 gagcggttga ccacctcgat cgccgtcggc tcgccgcgcg tgagcacgag caccgggccg
     3601 gggtactcca cggagtcgcg ccgcggctcg gcgccccgct gcagcacgta gccgaagcgc
     3661 cggtcgcggt cgccgg
//
LOCUS       DASYRV010000064         9994 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_26684, whole genome shotgun sequence.
ACCESSION   DASYRV010000064 DASYRV010000000
VERSION     DASYRV010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9994)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9994)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9994
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26684"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1684
                     /locus_tag="VGQ24_01390"
     CDS             <1..1684
                     /locus_tag="VGQ24_01390"
                     /inference="COORDINATES: protein motif:HMM:NF020683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="galactose oxidase-like domain-containing
                     protein"
                     /protein_id="HEV8453511.1"
                     /translation="TGCQDSGQAPAARPEAPPVIGPGGSTLMTLDLVYVCGNKFLVTN
                     ATPATVHLTYRVVGTAETGGLTLRPSPGEDPGYSETELETAVSGVVELYDDEVRVARR
                     SNDALPCGSPALSASATASGTEATTGKWGAPFPWQIIGLHVHLLRNGKVLSWGKFGNP
                     YVWDPSTKAFTVVPTSSWIFCSGHSFLSDGRLLVNGGHVSDDHGLPDANLFDPGTMSW
                     SSRPAMRKGRWYPTTTTLANGEAVTIAGRDQSGAVVGVPEVWTGSGWRALSSASRLLP
                     YYPRTFLAPNGKVFYAGENRATLYLSTSGTGSWSAVGNRLYGTRDFGSAVMYRPGKIL
                     YVGGGRTTNTAEIIDLNVATPTWRWTGSMAYARRHLNATILPTGQVLVTGGTSGTGFS
                     DEAQAVHAAELWDPTTGKWTTLASNAVNRVYHSTSLLLRDGRVLHTGGGDAAGNTNHY
                     DAEIFSPPYLFKGARPSIASAPSTVTYGQSFFVGNSNPTTITRVTWIRVGSVTHAFDM
                     NQRFVELSFVRTTEGLTVKAPANPNVAPPGHYLLFILNGNGVPSTARIVRIK"
     gene            complement(1677..2576)
                     /gene="ispE"
                     /locus_tag="VGQ24_01395"
     CDS             complement(1677..2576)
                     /gene="ispE"
                     /locus_tag="VGQ24_01395"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: protein motif:HMM:TIGR00154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEV8453512.1"
                     /translation="MIVTLFAYAKINLFLRVLARNDDGYHSLETLLCLVSLADVLTAE
                     RREGRGVTLEVTGADLGPAERNLAVQAAASVLQATGNRFAIHLTLTKRIPVRAGLGGG
                     SSDAAAALHAVNRLTGDAIPRHELLQFAARLGSDIPFFLTGAPLALAWNRGERMLRLP
                     PLPVAPALLLTPRIPIATGEAYGWVDNAKQSGGGRGAVALDLDALSRWGDIGRMAGND
                     FESPVFGRHGEIRSAFEALVATRPLVCRMSGSGSTLFAIYRVARDRDDAVMMLGRKHG
                     MITPVETVALAAAGPEPVSRTAT"
     gene            complement(2579..3577)
                     /locus_tag="VGQ24_01400"
     CDS             complement(2579..3577)
                     /locus_tag="VGQ24_01400"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HEV8453513.1"
                     /translation="MRRALSAALGIAISIGLLLWALRGVSISEVLRHIRGAHPTPLAM
                     AVVIATLTFPLRLIRWRLLLRDEQGRRYRAIPLWHAIALGFTANNLLPLRAGELIRSY
                     AAARLASARFSTVLSSVAVERIFDALTVVTLLTLALLSPDLPPNVTVGGRSVAHLARA
                     GAIAGAAGLLMAILVVAAPVTAERLVRRLLPFPHLASGIVSVLEGVRHGLGVLRTPTR
                     LAGVVFWSLVLWLANALAFYVAFAAFDIPVSYLGALLLQGLLILGISLPSTPGFFGPF
                     EAVIVAVLALYGVPKDVAFSYAIAFHITSFIPITLLGLWSLARNPGAFSPRRGAEA"
     gene            complement(3591..5303)
                     /locus_tag="VGQ24_01405"
     CDS             complement(3591..5303)
                     /locus_tag="VGQ24_01405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453514.1"
                     /translation="MTNPLGAADFFALEAGECLDRLEHLVTGEAPPAGEEFLRLARVL
                     RGSALMASQTQIARAAAGLEGLARAQRDHRREWDVATREQVAQSVEEFRLLVRRAREW
                     TEADTARAVRLGRTLEDLTGVAPNEANPPILATPPARQELHTGVRAFVAREGALIASA
                     LDRAARALRTSPGDREPLYNVIRRMQSLRGLAELGELAPLPEILDGIELAVGDLTRLF
                     APPPGVDEVMDAAARALTRISRDVAEHGRPDPAAEESARFTELLLRAFAVERDVVPIE
                     ALYLEGDLEPLSRPASQPQFASPEPFGPLELVSHGEHLCQSADLIAQARSATERDLRL
                     YHLLGALRSAAAPSTDPVAGALGIFARSAQEALGAGVASHSVDGLVSRIREAGQLLRG
                     IGEADDRMLISRRLLDVAHGLDRLRDETKSEESRVAPDEPPGEPVPIESLGFDSEIGI
                     VPVESLAPDWPAPEEPGALELSFNTFGRLIREGGTASPSLNGLLGRAATSPSTVPRAV
                     AAPQEPAVAIDTLCYRGHAALERALAVRHQIAAELTRDASLASLQPLLQELLDLVPLA
                     LVDT"
     gene            complement(5422..6141)
                     /locus_tag="VGQ24_01410"
     CDS             complement(5422..6141)
                     /locus_tag="VGQ24_01410"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEV8453515.1"
                     /translation="MTPMRLYVNVDHTATLREARKTDEPDPVEAALLCEQAGADGITA
                     HLREDRRHIQDSDAERLAAAVRVLNLELATSPDVVALTCRLRPYQATLVPERREEITT
                     EGGLDLSRPNPRLRETIRQLEQAGARVSLFIDPDLRTLDAAKDLGVPAIELHTGRYAH
                     TWRQKDTALDELRRAARHAADMGLFVHAGHGLTYANVRPVAAIPEIEELNIGHSIMSR
                     SMIVGMRQAVVEMRKAMGTKS"
     gene            6325..6669
                     /locus_tag="VGQ24_01415"
     CDS             6325..6669
                     /locus_tag="VGQ24_01415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453516.1"
                     /translation="MADSNLAKMATFWGTANGPASKTKQPPDWQRRIAIMQAYLQNDS
                     FRLTADVPGSDQDHRDLQVEIRRGSCTWSVPFVAVKSGQGWVVTEVDISTAGNPARGC
                     AEGAPPDSAKRG"
     gene            complement(6704..7099)
                     /gene="mce"
                     /locus_tag="VGQ24_01420"
     CDS             complement(6704..7099)
                     /gene="mce"
                     /locus_tag="VGQ24_01420"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HEV8453517.1"
                     /translation="MADRPRIAHVGIAVADLESALAFYRDVLGLEPHRPETVDGATIV
                     ALSFGDAEVELLAPMDAESPISRFLARRGPGIHHICYRVPDLDAALEACRKAGYRLVD
                     EVPRKGAAGRRIAFVHPKATAGILLELTD"
     gene            7114..7527
                     /gene="trxA"
                     /locus_tag="VGQ24_01425"
     CDS             7114..7527
                     /gene="trxA"
                     /locus_tag="VGQ24_01425"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEV8453518.1"
                     /translation="MTTSGRDTRLIEVAADDILPLENNEMGATNTLTVHVSDASFASE
                     IEQADGLVLVDFWASWCGPCQIVAPVLDQLAGEYAGKAKVAKVDVDVNQRTAMRFNVR
                     SIPSILFFKNGQHVDTVIGAVPKATLEGKIKQHLV"
     gene            7619..8452
                     /gene="rsmI"
                     /locus_tag="VGQ24_01430"
     CDS             7619..8452
                     /gene="rsmI"
                     /locus_tag="VGQ24_01430"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: protein motif:HMM:TIGR00096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEV8453519.1"
                     /translation="MSGTLYVVATPLGNLGDLSTRAAELLRNVPVVAAEDTRRTRGLL
                     SHLGASPTLLSFHAHSAEHRLETVLDILRSGRDVALVSDAGTPTVSDPGADLVGLARQ
                     DGITVVPIPGPSAVAAALSAAGLPGDRYLFLGFIPRKGRERARLLQRAAVEEWTVVFY
                     EAPPRLLALLEDLIPLAGADRRAVVARELTKMHEEIRSGTLGELVDYFTVTPPRGELT
                     IILRGTGSPPAHPDRTEEAVEQATSLLAEGLSRREVARRLTESLGLPRNEAYRLVMEL
                     P"
     gene            8449..9117
                     /locus_tag="VGQ24_01435"
     CDS             8449..9117
                     /locus_tag="VGQ24_01435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4159 domain-containing protein"
                     /protein_id="HEV8453520.1"
                     /translation="MIAPVLLVLAIIVGSRGRPDGPGPVMTIGRLHYDGGGDWYANPS
                     SLPNLLTALRTRTGLRVSTQERVVTLADDDLWNVPYLYMTGHGNVHWSDPDLATLRRY
                     LRQGGFLHADDNYGMDQSIRRELARLFPDHPLVEVPLDHPIYHLIYDLPKGIPKIHVH
                     DGKPAQGFGIFLDGRLAVYYSYQSDLGDGWEDPEVHHDPPEKREAALRMGMNLFAYAV
                     GYGE"
     gene            9114..>9994
                     /locus_tag="VGQ24_01440"
     CDS             9114..>9994
                     /locus_tag="VGQ24_01440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453521.1"
                     /translation="MTAPATQQALHRLARPLQSRSWAGWAALGVGLVALLLGAAAWSV
                     RLGWFSAPYWVLVAWALAAAALSAVIYVGWGIHSGLSVKRMARRLEDQGAWRRGTLTA
                     LLDGAASGTSVALLDFADHAHADDVARRGATAVEPLARPVRLILLAGAISLLLGALTF
                     ASAGPVRGAAAALWHPRRAWEATVAPVRLRASAELVDRGQPVEFHLEALGRRVATLWL
                     RLPGESWKARGVRLDSLGRAVVSTGPLESDLFARLTSGSRSSDTITVRVRLPVFLGSL
                     SVTARYPSYLGLENEPLP"
BASE COUNT         1722 a         3307 c         3294 g         1671 t
ORIGIN      
        1 caccgggtgc caggacagcg gccaggcccc ggcagctcgc cccgaagccc caccggtaat
       61 cggtcccggt ggcagcacac tgatgacgct ggacctggta tatgtctgcg gtaacaaatt
      121 cctcgtcacc aatgccacac cggcaacggt ccacctaacc taccgcgttg tggggacggc
      181 tgagaccggc ggcctgacgc tacgaccgag tcccggggaa gatccgggtt atagcgagac
      241 tgagctggag acagcggtct ctggagtggt ggagctttac gacgatgagg tccgagtcgc
      301 ccggcggtcg aacgacgcgc tgccgtgtgg atcgccggca ctttcggcat cggcaaccgc
      361 cagtggcacc gaggcaacca ctggcaagtg gggcgctccc tttccctggc agatcatcgg
      421 actgcacgtg cacctgctcc ggaacggaaa ggtcctgagc tggggaaagt tcgggaaccc
      481 ctacgtctgg gatccatcca cgaaggcctt taccgtcgtg ccgacctcat cgtggatctt
      541 ctgcagcggt cacagtttcc tgtccgacgg ccggctactt gtgaacggcg ggcacgtcag
      601 tgacgatcat ggtcttcccg acgcgaacct attcgatccc gggaccatgt catggtccag
      661 ccgtcctgcc atgcggaagg gtcgctggta cccgaccacg acgacgctgg cgaacggtga
      721 ggcagtgacg atcgcgggcc gcgatcagag cggggcggtc gtaggggttc ctgaagtctg
      781 gaccggatct ggctggcgtg cgctcagctc cgccagccgc ctgcttccct attaccctcg
      841 caccttccta gcccccaacg gcaaggtgtt ctatgcaggg gagaaccggg ccaccctcta
      901 cctatcgaca tcgggcaccg gttcgtggag cgcggtcggg aatcggctct atggcacccg
      961 ggacttcggc tctgcggtga tgtatcggcc cggcaagatt ctctacgtcg gcggtggacg
     1021 cacgactaac accgccgaga tcatcgacct gaatgtggca actccgacct ggcggtggac
     1081 cggctcgatg gcctatgccc gacgccatct gaatgcaacc attcttccaa ccggtcaggt
     1141 gctggtgacg ggcgggacca gcgggaccgg attcagcgac gaggcccagg cggtgcacgc
     1201 ggcagagctg tgggacccca cgacggggaa gtggactacg cttgcgagca acgcggtgaa
     1261 ccgggtttac cactccacgt ccctgcttct ccgggacggg cgggtcttgc ataccggggg
     1321 tggcgacgcg gccggcaaca ccaaccacta tgacgccgag atcttctcac cgccatatct
     1381 attcaaggga gcccggccat caatcgccag cgcgccctcg acggtcacct atgggcaatc
     1441 attcttcgtt ggcaacagta acccaacaac cattaccaga gtcacctgga tacgtgttgg
     1501 ctcggtgact catgcgttcg acatgaacca acgctttgtg gagctgtcct tcgtgcgcac
     1561 cacggaagga ctcactgtaa aggcgccggc gaaccccaat gtggcccctc cggggcatta
     1621 cctcctgttc attttgaacg gcaacggcgt gccctcgacc gcccggatcg ttcgaatcaa
     1681 gtagccgtcc ggcttacggg ctccgggcct gcggccgcca atgcgaccgt ctcaaccggc
     1741 gtgatcatcc cgtgtttgcg cccgagcatc atcactgcgt cgtcccgatc acgggccacg
     1801 cggtagatgg cgaatagagt cgaccccgag cctgacatcc ggcacaccag cgggcgggta
     1861 gcgacgagcg cttcgaaggc cgagcggatc tctccgtgcc gaccgaaaac cggcgattcg
     1921 aagtcgttgc ccgccatcct cccgatatct ccccaccgtg agagcgcatc gagatcgagc
     1981 gccaccgcgc ccctgccacc accggattgc ttggcgttat ccacccagcc gtaggcctcc
     2041 cccgtcgcaa tgggtatgcg tggcgtgagg agcagcgcgg gcgctaccgg gaggggcggc
     2101 agtcggagca ttcgctcacc gcggttccac gccagggcca gtggggcgcc ggtaagaaag
     2161 aaggggatgt cgctgccgag ccgggcggcg aactggagta gctcatggcg ggggatggca
     2221 tctcccgtga gccggttgac ggcgtgcaac gcggccgcgg cgtcactcga gccgccgccc
     2281 aggccggccc ggaccgggat gcgtttggtg agcgtgaggt ggatcgcgaa ccggttcccc
     2341 gtagcctgca gcacgctggc tgccgcttgc accgcgaggt tccgctccgc cggaccgagg
     2401 tcagcgccgg tgacctcgag ggttacgccg cgtccctccc tgcgctcggc tgtcaacacg
     2461 tccgccaggc tcaccaggca cagcagcgtc tctaggctgt ggtacccgtc gtcgttccgc
     2521 gccagcacgc gcagaaagag attgatcttg gcatatgcga agagggtgac gatcaccgtc
     2581 aggcctcagc cccgcgccgg gggctgaatg ctccggggtt ccgggccagc gaccacaagc
     2641 cgagcagggt gatcggaata aaggaagtga tgtgaaaggc tatggcatac gagaacgcca
     2701 catctttcgg aacaccgtag agcgcgagca ccgccacgat gacggcctcg aatggaccga
     2761 agaagcccgg tgtcgagggg agtgatatgc ccaggatgag caagccctgt agcagcaacg
     2821 cgccgagata gctcacgggt atgtcgaacg cggcgaacgc cacgtagaag gccaaggcgt
     2881 tcgccagcca caggaccagc gaccagaaga ccaccccggc aaggcgggtg ggtgtccgga
     2941 ggaccccaag cccgtgtcgc actccttcga ggacgctgac gatcccgctt gccaggtgcg
     3001 ggaaggggag cagccgccgc accaggcgtt cagctgtcac tggagcggca acgaccagga
     3061 ttgccatgag gagtccggcg gcaccggcga tagcaccggc tcgtgccaga tgggccaccg
     3121 atcgaccccc gacggtcacg ttcggtggaa gatcagggct gagcagggcc agtgtcagga
     3181 gcgtgacgac ggtaagcgcg tcgaagatac gctcgacggc gacggacgag agcacggtcg
     3241 agaacctcgc cgatgcgagg cgggcagccg cgtaggaccg gatcagctcg ccggccctga
     3301 gcggcagcag attgttggcg gtaaagccga gcgcgatcgc atgccagagt ggaatggcgc
     3361 ggtaccgccg tccctgttcg tccctcagga gcaggcgcca gcggatcagc cggaggggga
     3421 acgtcagggt ggcgatgacg accgccatgg cgaggggggt ggggtgggct ccccgaatgt
     3481 ggcgcagcac ctcgctgatg ctgacgccgc ggagcgccca cagcagcagg ccaatggaga
     3541 tcgcgatgcc cagcgccgcg gagagagccc ggcgcactcg cgcatcagta tcaggtgtcg
     3601 acaagtgcca gcggaactag atcgagcagc tcctgcagca gcggttgcag agacgccagc
     3661 gaggcatcgc gggtgagctc cgccgcaatc tgatggcgca cggcgagtgc acgctcgagc
     3721 gccgcgtgac cgcgatagca cagcgtgtcg atagcgacgg ccggctcctg cggcgccgcg
     3781 accgcccgcg gaaccgtgct gggcgatgtg gcggcacgcc cgagcagccc gttgagcgag
     3841 gggctcgcgg ttccgccctc gcgaatgagg cggccgaagg tgttgaagct gagctccagc
     3901 gccccgggct cctccggggc cggccagtcg ggcgcaaggc tctccaccgg gacgatcccg
     3961 atctcggaat cgaaccccaa agattcgatc ggcacgggct caccgggcgg ctcgtccggc
     4021 gccacccgag actcctcact cttggtctcg tcccgcaacc ggtccagccc gtgggccacg
     4081 tcgagcagcc gccgggagat cagcatgcga tcatcggctt cgccgatgcc gcgaagcagt
     4141 tgcccggctt cccggatccg gctcaccagg ccgtccaccg agtggctggc caccccggcc
     4201 ccgagcgctt cctgagccga gcgggcgaag atccccaggg ctcccgccac cggatcggtg
     4261 ctgggtgccg cggccgatcg gagggctccg agcagatgat agagccgcag gtcccgctca
     4321 gtagcggaac gcgcctgggc gatgagatcg gcgctctggc agaggtgttc cccgtgactg
     4381 accaactcca gcggcccaaa cggctccgga gacgcgaact gcggttgtga ggcggggcgg
     4441 ctaagcggct cgaggtctcc ctcgagatac agtgcctcaa tcggtaccac gtcacgctcg
     4501 acggcaaagg cacggagcag caattcggtg aagcgggccg actcctcggc ggcaggatcg
     4561 gggcgcccgt gctcggccac atcacgcgag atccgggtga gtgcgcgggc cgccgcgtcc
     4621 atcacttcat ccactcccgg cggtggtgcg aagaggcgag tgagatcgcc caccgccaac
     4681 tcgatcccat cgaggatctc gggaagagga gccagctcac ccagctcggc cagcccgcga
     4741 agcgactgca tccggcggat cacgttgtag agcggctctc gatcacccgg agatgtccgg
     4801 agcgcccgcg ccgcacgatc gagggcgctg gcgatgagcg ctccctcacg cgcgacgaac
     4861 gccctgactc cggtatgcag ctcctggcgc gcgggcggtg tagcgagaat tggtggattc
     4921 gcctcgttgg gagcgacccc ggtcaggtcc tccagggtcc gaccgaggcg taccgcgcgc
     4981 gctgtatccg cctcggtcca ctcccgcgcc cggcgcacga gcagccgaaa ctcctcgacc
     5041 gattgcgcca cctgttcacg agtagccaca tcccactcgc gccgatgatc gcgttgagcc
     5101 cgggcaagcc cctcgagtcc agcggctgcg cgggcaatct gcgtttggct ggccatgagc
     5161 gccgacccac gcagcacccg ggcaagacgg aggaactcct cgcccgctgg aggcgcctcg
     5221 ccggtcacga gatgctcgag ccggtcaaga cactctcctg cttcgagggc aaagaaatcc
     5281 gcggcgccga gtgggttggt catgaggtcg ggagctggga gctgggagtc aggagctgtc
     5341 ggctggaagg tagggggcaa ggctcacggc atcaacactt cgacatccct cccagctctc
     5401 ccagctccca gcgcccagct cctagctctt cgtccccatc gccttccgca tctccacgac
     5461 ggcctggcgc attcccacga tcatcgaacg gctcatgatg ctgtgcccga tattcagctc
     5521 ctcgatctcg gggattgcgg cgactggcct gacgttggca taggtgagcc cgtgtccggc
     5581 atggacgaac aatcccatgt cggctgcgtg gcgcgcggcc cggcggagct cgtccagcgc
     5641 tgtgtccttc tgccgccagg tatgcgcgta tcggccggtg tggagctcga tcgcgggcac
     5701 gccgagatcc ttcgccgcat cgagtgtccg gaggtcgggg tcaatgaaga ggctgactct
     5761 cgctcctgcc tgctccagct ggcgaatggt ctctcgcagc ctgggattgg gacggctcag
     5821 atccaaacct ccttcggtgg tgatctcctc ccgccgctct gggacgagcg tagcctggta
     5881 cgggcggagc cggcaggtca gggcgacgac gtccgggctg gtagcgagct ccagattgag
     5941 cacccggaca gccgccgcca gtcgctcggc gtcactatcc tggatatggc ggcgatcctc
     6001 ccgcagatga gcggtgattc cgtcggcgcc ggcctgctcg cagagcagtg cggcctctac
     6061 cggatccggt tcatcggtct tccgggcctc ccgtagggtt gccgtgtggt cgacattgac
     6121 gtacagccgc atcggcgtca ttgctcgccg ctcccatgag gttttaattt cgcagcctaa
     6181 cacccgacca gcgagagact tgtgatcaag aaacggtggt tcccagccgc gcttctacta
     6241 atgtcttgcg gcggtggcag cagccctgcg cccatccagc ccgccaacac agcggccggt
     6301 gcggtacagg gcttcatgga ggccgtggcc gacagcaatc ttgccaagat ggccacgttc
     6361 tggggtaccg ccaatggacc ggcgtccaag accaagcagc cgcccgattg gcagcgacgg
     6421 atcgccatca tgcaggccta cctgcagaat gattcgtttc ggctcaccgc cgacgtcccc
     6481 ggaagcgacc aggaccaccg ggatctccag gtcgagatca ggcgggggag ctgcacctgg
     6541 tcggtgccct tcgtcgccgt gaaaagcggc cagggatggg tggtgaccga ggttgatatt
     6601 tccactgccg gaaatcctgc ccgtggctgc gccgaggggg cgccgccgga cagtgccaag
     6661 cgcggttagc gagggaactt tccccgcccg gcgttgttat ctttcagtcg gtgagttcca
     6721 gcagaattcc ggcggttgcc ttcggatgca cgaaggcaat gcgacggcca gccgctccct
     6781 tccgcggcac ttcgtccacc agccgatatc ctgctttccg gcaggcttcg agcgcggcat
     6841 ccagatcggg tacgcggtag cagatgtggt gaatgccggg gcctctacgg gccaggaacc
     6901 tgctaatggg actctccgcg tccatgggcg cgagcagctc cacctcggcg tcgccgaagg
     6961 agagcgctac gatggttgcg ccatcgaccg tctcaggccg atgcggctcg aggccgagga
     7021 cgtcccggta gaaggcgagt gccgactcga ggtcggccac ggcaatacct acatgggcaa
     7081 tgcgggggcg gtcagccact gactcctcca aagatgacca ccagtggccg cgacacgcgg
     7141 ctcatcgagg tggccgccga tgacatacta ccactggaga ataacgaaat gggcgcgacg
     7201 aatactttga cggtgcacgt gagcgacgcc tcctttgcga gcgagatcga gcaggctgac
     7261 ggactcgtgc tcgtggattt ctgggcgtcg tggtgtggac cgtgccagat cgtcgcgcca
     7321 gtcctcgatc agcttgccgg cgaatatgcc ggcaaagcca aggtggccaa ggtggacgtc
     7381 gatgtgaacc agcggaccgc catgcggttc aacgtccgct cgatcccaag catcctgttc
     7441 ttcaagaacg ggcagcacgt cgacaccgtc attggcgctg ttccgaaggc gacgctcgaa
     7501 ggcaagatca agcagcatct tgtttaggag ggaagggtcg ggaagggcgg gaagggcggg
     7561 aatgtgagct gaacaccccg accttcccgc cttttccgtc cttcccgact ttcccgctat
     7621 gtccggtacc ctctacgtcg tcgccacccc gctgggcaat ctcggtgacc tctcgaccag
     7681 ggccgccgag ctgctgcgca acgtgccggt ggtcgctgca gaagacaccc ggcggacgcg
     7741 cgggcttctg agccacctcg gggccagtcc caccctcctc agctttcatg cccactcggc
     7801 cgagcaccgg ctcgagaccg tactggacat cctccgcagc gggcgggatg tagcactcgt
     7861 gtccgatgcc ggcacgccta ccgtgagtga cccgggagcg gacctcgtcg gcctggcgcg
     7921 ccaggatgga attaccgtcg tgcccattcc cggcccgtcc gcggtggccg cggctctctc
     7981 cgcagccggt cttccgggag atcgatatct cttccttggc ttcatcccgc gaaagggacg
     8041 tgaacgggcc cggctgctgc aacgtgccgc cgtggaggag tggaccgtcg tattctatga
     8101 agcacctccc cggctgctgg cgttgctgga ggacctgatt ccgctggcgg gcgccgatcg
     8161 cagggcggtg gttgcccgag aactcaccaa gatgcacgag gagattcgct ccggcacgct
     8221 cggtgagttg gtggattatt ttaccgttac acccccgagg ggggagctca ccatcattct
     8281 acgaggaacg ggctcgcccc cagctcatcc cgatcgcacc gaggaagccg tggaacaggc
     8341 tacatcgttg ctcgccgaag gcctctcgcg gcgagaggtg gcaaggcgat tgactgagtc
     8401 cctcggtctc cctcgtaacg aagcctatcg cctggtcatg gagctgccgt gatcgcaccg
     8461 gtgctcttgg tcctggccat cattgtgggc tcccggggca ggccggatgg ccccgggccc
     8521 gtgatgacca ttggacggct gcattacgac ggcggcgggg actggtacgc caacccatcc
     8581 agcctaccga acctgctcac cgccctgcgg acccggaccg gtcttcgggt gagcacccaa
     8641 gagcgggtcg tgaccctggc tgacgacgac ctctggaacg ttccatacct ttatatgacc
     8701 gggcacggca acgtgcactg gagcgatccg gatctggcca cgctgcgccg ctacctgcgg
     8761 cagggcgggt ttctccacgc ggacgacaac tacggcatgg atcagtcgat ccgccgcgaa
     8821 ctggcccggc tgtttccgga tcaccctcta gtagaagttc cactcgacca ccctatctat
     8881 catctgatct acgacttacc aaagggcatc ccgaagatcc acgtccatga cggaaagccg
     8941 gctcaaggct tcgggatctt cctggatgga cgcctggcgg tttactactc ctatcagagc
     9001 gatctcgggg acgggtggga agaccccgag gtgcaccacg acccccccga aaagcgggag
     9061 gccgcgcttc ggatgggcat gaatctcttt gcctatgccg tcggatacgg cgaatgaccg
     9121 cccccgcaac ccagcaagcg cttcatcggc tggctcgtcc tctccagagc cggagctggg
     9181 ccgggtgggc cgctcttgga gtcggcttgg tcgctctcct cctcggtgct gccgcatgga
     9241 gcgtccggct cggctggttc agcgcgccct actgggtgct tgtcgcgtgg gcgttggcgg
     9301 cggcggcgct ctccgcggtc atctatgtcg gctgggggat ccactccggt ctttcggtca
     9361 agcgtatggc acggcggttg gaagaccagg gcgcctggcg ccggggcacg ctcactgctc
     9421 tcctcgacgg ggcggcgtca ggcaccagcg tcgccctgct cgacttcgcc gatcacgccc
     9481 atgccgacga cgtagcgcgg cggggtgcca cggcggtgga gccgctcgcg cgtccggttc
     9541 ggctgattct cctcgcgggg gcaatctctc tcctcctcgg ggccctcacc ttcgcctcgg
     9601 cgggacccgt gcgcggagcc gcggcagccc tctggcatcc ccggcgtgcc tgggaggcga
     9661 ccgtcgcgcc cgtgcgcctg cgggcatccg ccgagctggt ggaccgcgga cagccggtcg
     9721 agtttcacct ggaggcgctg gggcggagag tcgcgacact ttggcttcgg ttgcccggcg
     9781 aatcgtggaa ggcgcgaggt gtgcgactcg actcgttggg tcgcgcggtc gtctccaccg
     9841 gtcctctcga gagcgacctc tttgcccgtc tcaccagcgg aagccgatcg tccgacacca
     9901 tcaccgtgcg agtgcggcta ccggtgttcc tcggatcgct cagcgtcacc gcccgctatc
     9961 cctcttatct cggactggag aatgagccac tgcc
//
LOCUS       DASYRV010000065         2416 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_441472, whole genome shotgun sequence.
ACCESSION   DASYRV010000065 DASYRV010000000
VERSION     DASYRV010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2416
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_441472"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1179)
                     /locus_tag="VGQ24_01445"
     CDS             complement(<1..1179)
                     /locus_tag="VGQ24_01445"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEV8453522.1"
                     /translation="MMKRAWAYGTVGLVLLMLCAAGGPPAHAQILSGSLSGKVVDETG
                     ALVSGADVTLTNEASKDVRRTRTNSEGFFTFASIPPGSYAVRVELAGFRTSERTGVRI
                     RIGDSRSLGQITMAVGGRAEQTVVTAQIELVPLNSGEKSATLTSDEIQNIPIVGRTAT
                     ELLKILPGLTPLTVGAQNRPGFTGEVIGINGNGEYQGGGNNNQSAIGNYSGNGSRETS
                     MDLTIDGAPAMDPGCNCGTSVNPNPEMTQEFKVLQSNFGAEHAKGPVTMQVLSKSGGH
                     DFHGMAYTYMRDYHLNSNDWFANKVGSERVKNKFLYPGFNLGGPLLIPGTGFNKSRDK
                     VFFFVGFEYFKQRLDTGFVKSWVPTTAMRNGNFSEVPGLGLSGDDVNRIPDGFPNGVI
                     P"
     gene            complement(1305..2009)
                     /locus_tag="VGQ24_01450"
     CDS             complement(1305..2009)
                     /locus_tag="VGQ24_01450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate-binding family 9-like protein"
                     /protein_id="HEV8453523.1"
                     /translation="MRRGVLLVALLVLLAGAPAHARDAGVIESRRAGSDFALTADPAA
                     APWKGVQGVIADHDRFGAVVPGHRTEIRSRWTPQSLYLLFICPYEELYLHPDPSTGTE
                     TNKLWDWDVAEAFIGSDFKDIKKYKEFQVSPQAEWVDLAIDRGTQPPSHDVAWNSGYE
                     VKARLDRDHHVWYGAMRIPMQAIGVPAPKPGVETRINLYRCQGPPDHRKYINWQAVKN
                     ETFHTPEAFGLLRLRN"
     gene            complement(2009..>2416)
                     /locus_tag="VGQ24_01455"
     CDS             complement(2009..>2416)
                     /locus_tag="VGQ24_01455"
                     /inference="COORDINATES: protein motif:HMM:NF018178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HEV8453524.1"
                     /translation="QGKPILIAVPDSDSGIYLRGNSKAQVNIWCWPVGSGEVYGYRTD
                     ESMPASVRAAVTPKKLADHDIGQWNTFEITMKGSRLSVVLNGERVIENAELPGVAARG
                     PIALQHHGSKKDGRWVSPPALVQFRNVQVKELK"
BASE COUNT          362 a          786 c          817 g          451 t
ORIGIN      
        1 ggggatgacg ccgttcggga agccgtccgg gatccggttc acgtcgtcgc cggagagccc
       61 gaggccgggc acctcgctga agttcccgtt ccgcatggcg gtggtgggca cccacgactt
      121 cacgaagccg gtgtccaggc gttgcttgaa gtactcgaaa ccgacgaaga agaacacctt
      181 gtcgcggctc ttgttgaagc ccgtgccggg gatgagcagc ggtccgccca ggttgaagcc
      241 gggatagagg aacttgttct tgacccgttc gctgcccacc ttgttcgcga accagtcgtt
      301 cgagttcagg tggtagtcgc gcatgtacgt gtaggccatg ccgtggaagt cgtgcccgcc
      361 ggacttgctc agcacctgca tcgtcaccgg tcccttggcg tgctcggcgc cgaagttgga
      421 ctgcaggacc ttgaactcct gggtcatctc cgggttggga ttcaccgacg tgccgcagtt
      481 gcacccgggg tccatcgccg gagccccgtc gatcgtgagg tccatcgagg tctcgcggct
      541 cccgttgccc gagtagttcc cgatcgcgct ctggttgttg ttcccgccgc cctggtactc
      601 gccgttgccg ttgatgccga tgacctcgcc ggtgaagccc gggcggttct gggcgccgac
      661 ggtgagcggc gtgaggccgg gaaggatctt cagcagctcg gtcgcggtcc ggccgacgat
      721 cgggatgttc tggatctcgt cggaggtcag ggtcgcgctc ttttcgcccg agttgagcgg
      781 gaccagctcg atctgggccg tgaccaccgt ttgctcggcc cttcccccga ccgccatcgt
      841 gatctgcccg aggctccggc tgtcgccgat ccggatccgg acgccggtgc gctccgatgt
      901 tctgaagccc gccagttcca cccgtacggc gtagctgccg ggtggaatgg aggcgaacgt
      961 gaagaagccc tcgctgttgg tcctggtgcg gcggacgtcc ttcgacgcct cgttcgtgag
     1021 ggtcacgtcc gccccggaga cgagcgctcc ggtctcgtcg acgaccttgc cggagaggct
     1081 gccgctgagg atctgcgcat gcgccggcgg accaccggcg gcgcacagca tcagaagcac
     1141 cagaccgacc gtcccgtatg cccacgcgcg cttcatcatg ggaacctccc caggaccgag
     1201 agagcccttc gattcacgaa gccgatgaag acgggacgga ggatgaatct ggggagattg
     1261 ttagagaact ttaaaaagct gtcaaggccc ttttttcggg gccgtcagtt gcgcagacga
     1321 agcaggccga aagcctcggg cgtgtggaac gtctcgttct tgaccgcctg ccagttgatg
     1381 tacttgcggt ggtcgggcgg cccctggcag cggtacaggt tgatgcgcgt ctcgacgccc
     1441 ggcttggggg cagggacgcc gatcgcctgc atcgggatgc gcatcgcgcc gtaccagaca
     1501 tggtggtccc ggtcgagccg cgctttcacc tcgtagccgg agttccacgc gacatcgtgg
     1561 ctcggcggct gcgtgccgcg gtcgatcgcc aggtccaccc actcggcttg cggcgatacc
     1621 tggaactcct tgtacttctt gatgtccttg aagtcgctgc cgatgaatgc ctcggccacg
     1681 tcccagtccc agagcttgtt cgtctcggtg ccggtcgaag gatccggatg caggtagagc
     1741 tcctcgtagg ggcagatgaa gagcagatag aggctttgcg gggtccagcg cgagcggatc
     1801 tcggtgcggt ggcccggcac caccgccccg aaacggtcgt ggtccgcgat cacgccctgg
     1861 acgcccttcc agggcgccgc ggccggatcg gcggtgagcg cgaaatcgga cccggcgcga
     1921 cggctctcga tgacgcccgc atcccgcgcg tgggcggggg cgccggcgag cagcaccagc
     1981 agcgcaacga gcagcacgcc gcgtcgcact acttcagctc cttgacctgg acgtttcgga
     2041 actggaccag cgccggcggc gacacccagc ggccgtcctt cttgctgccg tggtgctgga
     2101 gggcgatcgg accgcgcgcg gccacgcccg gaagctccgc gttctcgatc acgcgctcgc
     2161 cgttgaggac cacgctgagc cggctgccct tcatcgtgat ctcgaacgtg ttccactggc
     2221 cgatgtcgtg gtcggcgagc ttcttcggcg tcaccgccgc ccggacggac gccggcatgc
     2281 tctcgtcggt ccggtacccg tagacctcac ccgatccgac tggccagcac cagatgttga
     2341 cctgcgcctt ggagtttccg cgcaggtaga tcccggagtc ggagtcgggg acggcgatca
     2401 ggatgggctt gccctg
//
LOCUS       DASYRV010000066         6858 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_858878, whole genome shotgun sequence.
ACCESSION   DASYRV010000066 DASYRV010000000
VERSION     DASYRV010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6858
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_858878"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..493)
                     /locus_tag="VGQ24_01460"
     CDS             complement(<1..493)
                     /locus_tag="VGQ24_01460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HEV8453525.1"
                     /translation="MATRPKRTVKAPKKIAGASRSVKRAKTRSGGPGADGAGPGGRSR
                     RPALVIVESPTKAKTIGKYLGSGYDVRATVGHLRDLPTRELGVDVDNGFEPKYVTIKG
                     KTKTLSELKKAAKGASVIYLATDPDREGEAIAWHVADQLKALVPTHRILFHEITKAAI
                     QEAL"
     gene            complement(599..1117)
                     /locus_tag="VGQ24_01465"
     CDS             complement(599..1117)
                     /locus_tag="VGQ24_01465"
                     /inference="COORDINATES: protein motif:HMM:NF013375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEV8453526.1"
                     /translation="MPRHIVLVGLPGSGKTTVGRLVAEALGAPVIDIDGLLVREMGMP
                     VAQIFGMVGEVRFREMEREAVKAAQAGASGVIVPGGGWAAQPGELEAAKTTSLVVYLQ
                     CQPSTAAKRSQEGEVRPLLTGMDPLQRMRALLQEREPFYLLAHHPVQADSAPAEVVAR
                     EVVELARRHAGW"
     gene            complement(1117..2343)
                     /gene="aroC"
                     /locus_tag="VGQ24_01470"
     CDS             complement(1117..2343)
                     /gene="aroC"
                     /locus_tag="VGQ24_01470"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEV8453527.1"
                     /translation="MLRFSTAGESHGKALVTIVEGLPAGLPVSAEWVDGELARRMLGY
                     GRGARMKIERDRIEWLSGLRAGETLGSPVAMLIHNRDWANWEDVMAYEASQDIGELRR
                     RRVTRPRPGHADLAGVLKYDRIDARDILERASARETTARVAAGALAKRLLNEFGVEVG
                     SHVLSMGGIRAAPVGLPVPLNEASDRSEVRVLDPAAEAEIIRRIDAAKRAGDTLGGEV
                     EVVARGVVVGLGSHVSWDRKLDGRLAGMLMSIPAVKGVEIGMGFEAARRPGSEVHDPI
                     ESGAAGQQGGGADARGGFRRPTNNAGGLEGGMTTGEPVVVKLAMKPIATLMSPLATVD
                     LDSGEPAKAVSERSDVTAVPAMGVIAEALVAIALADAMLEKFGGDSLREMRRNYDGYV
                     AALGSRWAALRRATEG"
     gene            complement(2443..4206)
                     /locus_tag="VGQ24_01475"
     CDS             complement(2443..4206)
                     /locus_tag="VGQ24_01475"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMIN domain-containing protein"
                     /protein_id="HEV8453528.1"
                     /translation="MTRLSGLMLATFAIFGVTSAGRADGPASGEVTGVSVQPSPGRAD
                     VIINVRGAVEVRDFMLDRPNRLVLDVVGAKLKGNPGSLYDGVKRGGVLNVRYSQFQRD
                     VVRIVMELDGAKDYHLERVADAIRVSFGTDQSFLAWSSNDPTEAPVPAAKPRREPEVK
                     LSARQLVRAPMEEPRITVVWDRANIADVVAGFAAFSGRTIILGKDVKGEVNAEIRNQP
                     WPQAFQAILASQGLSAQEMPGGIIRVDAPSALAVLDSLEPLETAVVRINYGKAKDMSK
                     SIEGSLTKGRGKVIADDNSNSLIITDTRSRIPNLTDFVRGLDIRTPQVSIKAKIVFVD
                     RTDIEQLGLKYDLGSQSQFFNQLVRRPNPTVPTPNDPSGAGGIVDLGGNSVSAVGNAS
                     STIVGSALDLIFSTALGGFNLTTFLSALERQDLSDIQAEPVITTLDNRKADILVGEET
                     PVRVIDAGTGGAAATSNVQFKETGIRLTVTPHVTSNRQISMELHTERSSLQELAAADL
                     GFIFQTQKADNQLLVNDGETAVIGGLTVTEVKNTRSGIPLLSGLPIIGKLFSFSSSTE
                     NRRDLIILVTPRIIDDGITPE"
     gene            complement(4203..5036)
                     /locus_tag="VGQ24_01480"
     CDS             complement(4203..5036)
                     /locus_tag="VGQ24_01480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453529.1"
                     /translation="MARNAYGLALLVALALAGCSAFSNKKEEQAAKAAEAKLVMIRAR
                     TDSLRKARHLADSLAQVRQVACVDSVRIELGKAVAAKSKTKSKRKKPKTAPPSEEMIL
                     TQAQSVCGQEAMAPQTTVATAQPAAADTAHAAAPAPAPAATDSVRPVAAVASNDSVVW
                     ADSVRKAKEIEMSRETFSYGGAARDPFNSLFNMAKNGPELADLQLVGIYQNLRTPTRS
                     VAVFREKEGGKRHKLRAGDQVGRSRLVQIRDRDVVFTIEDFGFERQETLSLRKQEDVI
                     Q"
     gene            complement(5026..5655)
                     /gene="pilO"
                     /locus_tag="VGQ24_01485"
     CDS             complement(5026..5655)
                     /gene="pilO"
                     /locus_tag="VGQ24_01485"
                     /inference="COORDINATES: protein motif:HMM:NF016253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA];
                     GO_process: GO:0043683 - type IV pilus assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HEV8453530.1"
                     /translation="MAISNEKATPLLALGLAAIVGYIAYTGAVIQMVGINGLAARNAQ
                     VAAVRDTIAHLEAATDSAKKELARGTVADVRKRLESYRGSLSLLRRLVPERNEVPNLL
                     DDISTRSKIRGVTLSQVVPQPVEAGPVPFDTYKYNMSVIGRYDQIGQFMADVASLQRI
                     IVPYDLTIGVANSQAAKVLGDTTGALLEAKFQIRTYVKSPNPEGEASGT"
     gene            complement(5660..6379)
                     /locus_tag="VGQ24_01490"
     CDS             complement(5660..6379)
                     /locus_tag="VGQ24_01490"
                     /inference="COORDINATES: protein motif:HMM:NF016992.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HEV8453531.1"
                     /translation="MITVNLRPGQKRKRAGSNPFKGLLDNFRGLGTRVKDPLLLAAMA
                     GWICVLAVLGFIYLNTARQLYTLEPRLEQARSENRRFKTFLADKRRQEMIRDSLLAQI
                     TVIRNVDGDRYIWPHLLDEVTKALPAYTWLVDMGPIAAAPVNATPPKNKADSAAAAEA
                     AKAAPVLAFQLNGRTIDIQAYTRFLRQLEASPWIENATPVSAQTVVEKDRPVTAFTIR
                     ATFSRADSAYIRTAPFSQSVR"
     gene            complement(6405..>6858)
                     /gene="pilM"
                     /locus_tag="VGQ24_01495"
     CDS             complement(6405..>6858)
                     /gene="pilM"
                     /locus_tag="VGQ24_01495"
                     /inference="COORDINATES: protein motif:HMM:NF022554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pilus assembly protein PilM"
                     /protein_id="HEV8453532.1"
                     /translation="TNIYILDDGIPVLTRDIPVGTRRFREDLQRERGQSAEEAERMLQ
                     GAGGEIPEAFLHTRTEELAVGIERAGAFLQTSSRSAGGISRIFITGGGARIPRLSRAL
                     GDRLQIPVQLANPIEKLQVAEGVFDAMQVDEVAPLLMLPIGLALRSAA"
BASE COUNT         1058 a         2309 c         2250 g         1241 t
ORIGIN      
        1 tgagcgcctc ctggatggca gccttggtaa tctcgtggaa gaggatgcgg tgggtgggaa
       61 ccagcgcctt gagctggtcg gccacgtgcc aggcgatggc ttcgccctcg cgatcagggt
      121 cggtggccag gtagatgacc gaggcgcctt tggccgcctt cttgagctcc gagagtgtct
      181 tggtcttgcc tttgatggtc acgtacttcg gctcgaagcc gttatccacg tccacgccga
      241 gctcgcgagt gggcagatcg cgcagatgcc ccacggtcgc cctcacgtcg tagccggagc
      301 cgagatactt cccgatggtc ttggccttgg tgggcgactc tacgatgacc agcgcgggcc
      361 tgcggctacg gcccccgggg cccgcgccgt cagcgccggg tccgccggac ctggtcttgg
      421 cgcgcttcac gctccgggag gcacccgcga ttttcttcgg ggcctttacc gtccgtttcg
      481 gtcgtgtcgc catagatcca gtgtaactgc tccgatcatc aaatggtcaa gtggggaggg
      541 aacaaaaaac ccgcacctcc cgtaaatgca agctcatcag ggacattcct gcggcaccct
      601 accaaccagc gtgccgccgt gccagttcca cgacctcgcg ggcgaccacc tcggccgggg
      661 cactgtcggc ctgcaccgga tggtgagcca ggaggtagaa cggctctcgt tcctggagca
      721 gcgcacgcat ccgttgcaac gggtccatgc cggtcaagag ggggcgcacc tcgccttcct
      781 ggctccgttt ggccgccgtc gacggctggc actggagata gacaaccagg ctcgtcgtct
      841 tggcggcctc gagctcgccg ggctgtgccg cccagccccc acctgggacg atgacacctg
      901 acgctccggc ctgcgcggcc ttgaccgcct cccgctccat ctcccggaat cgcacctcgc
      961 cgaccatgcc gaagatctgc gccaccggca tgcccatctc ccgcaccagc aggccatcga
     1021 tgtcgatcac gggagcgccg agcgcctcgg ccacgagacg gccgacggtg gtcttgcccg
     1081 agccgggcag cccgaccaac acgatgtggc ggggcatcag ccctcggtgg cgcgccgcag
     1141 cgccgcccag cgggagccga gcgccgcgac atacccgtcg tagttacggc gcatctcgcg
     1201 cagggagtcg ccgccaaact tctccagcat cgcgtcggcc agggcgatcg ccaccagcgc
     1261 ctcggctatg acccccatcg cgggcacggc ggtgacgtcg gagcgctcgc tcaccgcctt
     1321 ggccggttct cccgaatcca ggtccaccgt ggccaacggc gacatcaggg tcgcgatggg
     1381 cttcatcgct agcttaacaa cgaccggttc cccggtggtc atgcccccct cgagtccgcc
     1441 ggcattgttg gtgggtcggc ggaacccgcc gcgggcgtct gccccgccgc cctgctgccc
     1501 cgccgccccg ctttctatcg gatcatggac ctccgacccc ggccgccggg cggcctcgaa
     1561 gcccattccg atctcgactc ccttcaccgc cgggatcgac atcagcattc cagccagccg
     1621 gccatcgagc ttccggtccc agctcacgtg gctgcccagc ccgacgacga ccccccgggc
     1681 tacgacctcg acttcgcctc cgagagtatc gccggccctt ttcgccgcat cgatccgccg
     1741 gatgatctcg gcctcggcgg ctggatccag cactcgcacc tcggagcgat cggatgcttc
     1801 gttgaggggg accggcagcc cgacgggagc agcgcgaatg ccgcccatcg agagcacgtg
     1861 gcttcccacc tccaccccga attcgttgag cagccgcttg gccaaggcgc ccgccgccac
     1921 tctggccgtg gtctcccgcg cgctcgcccg ctccaggatg tcgcgggcat cgatccggtc
     1981 gtacttcagc actccggcca gatcggcatg tcccggccgc ggtcgggtga cccggcggcg
     2041 ccgcagctcc ccgatgtcct gggacgcctc ataggccatg acgtcttccc agttggccca
     2101 gtcgcgattg tgaatcaaca tggcgaccgg cgagccgagc gtctcgccgg cccggagccc
     2161 ggagagccat tcgatgcggt cgcgctcgat cttcatccgc gccccgcggc cgtagccgag
     2221 catccggcgg gcgagctcac catccaccca ctccgctgag accgggaggc cggccggcag
     2281 cccctcgacg atggtgacga gggccttccc gtgcgattcg cctgcggtag agaatcggag
     2341 catgatgatc ggttcctttg gaggaggtcc gccacagccc tgattctaac gaacgagccc
     2401 ggcttgcgcc gggctcgttc tgtttggaat gaacctatgt catcactcag gcgtgatgcc
     2461 gtcgtcgatg atccgggggg tgaccagaat gatcaggtca cgccggtttt ccgtgctcga
     2521 gctgaagctg aacagcttgc cgatgatcgg caggccggag agcagcggaa tgccggaccg
     2581 ggtgttcttc acttccgtca ccgtgaggcc gccgattacc gcggtctcgc cgtcgttgac
     2641 caggagctgg ttgtcagcct tctgggtctg gaagatgaag ccgaggtcgg cggccgcgag
     2701 ctcctggagc gacgaccgtt ccgtgtgcag ctccatggat atctggcgat tgctggtcac
     2761 gtgcggcgtt acggtcagcc ggataccggt ctccttgaac tgcacgttgg acgtggcggc
     2821 agctccgcca gtacccgcgt cgatcactcg caccggcgtt tcctcaccga cgagaatgtc
     2881 ggccttccgg ttgtcgagcg tggtgatgac cggctcggcc tggatatccg agagatcctg
     2941 ccgctcgagc gcgctcagga acgtggtcag gttgaacccg cccagcgcgg tcgagaagat
     3001 caggtcgagc gcggagccga cgatggtgct gctcgcatta ccgacggcgg agaccgagtt
     3061 gccccctaag tctacgatgc ctccggcccc gctgggatcg ttgggtgtgg ggaccgtcgg
     3121 gttgggccgc cgcaccaact ggttgaagaa ctggctttgg ctccccaggt cgtacttgag
     3181 cccgagctgc tcgatgtcgg tccggtccac gaatacgatc ttggccttga tcgacacttg
     3241 cggggtgcgg atatcgagtc cacggacgaa gtcggtcaga ttggggatcc ggctccgggt
     3301 gtccgtgatg atgagtgagt ttgagttgtc gtcagcgatg accttgcccc gacccttggt
     3361 caggctgcct tcgatgctct tggacatgtc cttcgccttg ccgtagttga tccgcacgac
     3421 ggcggtctcc agcggctcga gcgagtcgag cacggccagt gccgaaggcg catcgacccg
     3481 aatgatcccg cccggcatct cctgggccga caggccctgg ctggccagga tagcctggaa
     3541 cgcctggggc cacggctggt tccggatctc ggcgttgact tctcccttga cgtccttgcc
     3601 gagaatgatg gtccgtccgc tgaacgcggc gaacccggcg acgacgtcgg cgatgttggc
     3661 gcggtcccac acgacggtga tccgcggctc ctccatcggc gcgcgcacca gttgcctggc
     3721 gctgagcttg acttcgggct cacgccgcgg cttggcggct ggcaccggcg cttcggtcgg
     3781 gtcgttggac gaccaggcca ggaagctctg gtcggtgccg aaggacaccc ggatggcgtc
     3841 ggcgacgcgc tcgaggtggt agtccttggc accgtccagc tccatcacga tacggaccac
     3901 gtcgcgctgg aactgagagt agcgcacgtt gagcacgccg ccccgcttga ccccgtcgta
     3961 cagactcccg gggttgccct tgagcttggc gccgaccaca tccagcacca gccggttggg
     4021 ccgatcaagc atgaagtcgc gcacttcaac cgcaccacgc acgttgatga tgacgtcggc
     4081 gcgtccggga gatggctgga cgctgacgcc cgtgacctcg ccgctcgcgg gaccatccgc
     4141 gcgtcccgcg gaggtcactc cgaagatcgc gaaggtggcg agcattaggc cagacagtcg
     4201 ggtcattgga ttacgtcctc ctgcttccgg agcgaaaggg tttcctgccg ttcaaagccg
     4261 aagtcctcga ttgtgaacac aacgtcacgg tcacgaatct gtaccaggcg tgagcggccg
     4321 acctgatcgc ccgcccgaag cttgtgccgc ttgccgcctt ccttctcccg gaacaccgcc
     4381 acgctgcgcg tcggcgtccg caggttctgg tagatcccca ccagctggag atcggccagc
     4441 tcgggcccgt tcttggccat gttgaacaag gagttgaacg ggtcgcgggc ggcgccgccg
     4501 taggagaagg tctctcgaga catctcgatt tccttggcct tccgcaccga gtcggcccac
     4561 accaccgagt cgttcgacgc caccgcggca accggcctca cgctgtcggt tgcggccggc
     4621 gctggcgctg gagccgcggc gtgggcggtg tccgcggccg ccggctgagc cgtggcaacg
     4681 gtggtctgcg gagccatcgc ctcctggccg cagaccgatt gggcctgggt caggatcatc
     4741 tcttccgatg gcggggcggt ctttggcttc ttcctcttcg actttgtctt cgacttggcg
     4801 gccacggcct tgcccagctc gatgcggacc gagtctacgc aggcgacctg gcgaacctga
     4861 gccagtgaat cggccaggtg ccgagccttg cgcaggctat cggtgcgggc gcggatcatg
     4921 accagcttgg cctcggccgc cttggcggcc tgctcctctt tcttattgga gaaagcggag
     4981 cacccagcca gcgcgagcgc gaccaggaga gcgagcccgt aggcattacg tgccactggc
     5041 ctctccttcc gggttgggag acttgacgta ggtgcgaatc tggaacttgg cctcgagcag
     5101 cgccccggtg gtgtcaccga gcaccttggc tgcctggctg ttggcgactc cgattgtcag
     5161 atcgtatggc acaataatcc gctgcaggct ggccacgtcg gccatgaact ggccgatctg
     5221 atcgtacctg ccgatgacgg acatgttgta cttgtaggta tcgaacggca cgggtcccgc
     5281 ctcgaccggc tggggcacca cctgcgacag cgtcaccccc cggatcttgc tccgggtgga
     5341 gatgtcatcc agcaggttgg gtacctcgtt ccgctccggc accaggcgcc gcagcagcga
     5401 caggctcccg cgatagctct ccagccgttt gcggacatcc gcgaccgtgc cgcgagccag
     5461 ctccttcttg gcgctgtcgg tggcggcctc gaggtgggcg atggtgtccc ggacggcggc
     5521 cacctgcgca ttcctcgccg ctagtccgtt gatgcccacc atctggatga ctgccccggt
     5581 gtaggcgatg tagcccacga tcgcagcgag tcccagggcc agtagcggag tagccttttc
     5641 gttggagatg gccatggcct cacctcaccg actggctgaa gggagcggtg cgaatgtagg
     5701 ccgagtcggc cctggaaaac gtggcgcgaa tggtgaaggc cgtgaccggg cgatcctttt
     5761 cgacgaccgt ctgggccgag accggagtcg cgttctcgat ccacggtgag gcttccaact
     5821 gccggagaaa ccgggtatag gcctggatgt cgatggtgcg cccgttgagc tggaacgcga
     5881 gcaccggggc ggcctttgca gcctcggcag cagcagcgga gtcggccttg ttcttgggcg
     5941 gcgttgcgtt gaccggcgcc gcggcgatcg ggcccatgtc caccagccag gtgtaggccg
     6001 gcaatgcctt ggtcacctcg tcgagcaggt gaggccagat atagcgatcg ccatccacgt
     6061 tccggatgac ggtgatctgc gcgagcagcg agtcccggat catctcctgg cgccgcttgt
     6121 cggccaggaa ggtcttgaag cggcggttct cgctgcgcgc ctgttccagc cggggctcca
     6181 gcgtatagag ctgccgcgcg gtgttcagat agatgaaccc gagcacggcg agcacgcaga
     6241 tccagccggc catggcggcc aggaggagcg gatccttcac ccgagtgccc aggccgcgga
     6301 agttgtccag cagcccctta aaggggttgc tgccggcgcg cttgcgcttc tgaccgggtc
     6361 tgaggttgac ggtaatcatc tggtgacgga tccctgggtc ggggtcaggc tgcggaacgg
     6421 agcgcgagac cgatcgggag catcagcagg ggagcgacct cgtccacctg cattgcatcg
     6481 aatacgcctt cggcgacctg gagcttctcg atcgggttgg cgagctgaac cggaatctga
     6541 agccggtctc ccagcgcccg gctgagccgc ggaatccgcg cgccaccacc ggtgatgaag
     6601 atccgcgaga tgccgccggc agagcggctg gaggtctgaa ggaacgcgcc ggcgcgctcg
     6661 atcccgaccg caagctcttc ggtgcgggtg tggaggaacg cctccgggat ctcgcccccg
     6721 gccccctgca gcatccgctc cgcctcttcg gccgactgac cccgctcccg ctgcagatct
     6781 tcccggaacc gccgggtgcc gaccgggatg tcccgggtga gcaccggaat gccgtcgtcc
     6841 aggatgtaga tgttggtg
//
LOCUS       DASYRV010000067         2660 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2714698, whole genome shotgun sequence.
ACCESSION   DASYRV010000067 DASYRV010000000
VERSION     DASYRV010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2660
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2714698"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..620
                     /gene="carB"
                     /locus_tag="VGQ24_01500"
     CDS             <1..620
                     /gene="carB"
                     /locus_tag="VGQ24_01500"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: protein motif:HMM:NF014225.4"
                     /note="four CarB-CarA dimers form the carbamoyl phosphate
                     synthetase holoenzyme that catalyzes the production of
                     carbamoyl phosphate; CarB is responsible for the
                     amidotransferase activity; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carbamoyl phosphate synthase large subunit"
                     /protein_id="HEV8453533.1"
                     /translation="LHDDVLQPYVAVKEAVFPFSKLPGVDLILGPEMRSTGEVMGIAD
                     SFGMAFAKAQISADGALPLAGSVFVTVNDHDKANVTPIARRFHALGFKMLATEGTARY
                     LRARGIPTERVLKVYEGRPNAIDLLVSGQIQLLINTPLGKLTQQDDYTIRRAALQHRV
                     PYTTTLSAASAACDAIIALRSRAGEVRPLQEWHALAREMSPEWTG"
     gene            575..1573
                     /gene="murB"
                     /locus_tag="VGQ24_01505"
     CDS             575..1573
                     /gene="murB"
                     /locus_tag="VGQ24_01505"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: protein motif:HMM:NF010480.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEV8453534.1"
                     /translation="MARTGTRDVARVDGVTARDKGFIAALRERVRGRVREDDPVARYS
                     TYRIGGPATVLLPATPQDVAAALMLAHESGVPWFAVGLGSNILLPDEGLDALVIRLGK
                     GLDAVRRDGDSWTVGAGLPAPLAARRTAEAGFAGLHIFVGVPGTVGGGVYMNAGCHGG
                     DWSEVVQRVTVVDATGRDSVLERPEIPFTYRRSGLEGRIVLETTVQLRQEEQGKLQEA
                     VAEMFEWRQRGTPFNQPCCGSVFKNPAGPSWKREDGSRTAGQLIEAAGLKGFAIAGAQ
                     VSPMHANYFVNTGEATAADVRRLIEHVQSVVLERFGVRLEPEVKLIGASGEYLNKE"
     gene            1708..2289
                     /locus_tag="VGQ24_01510"
     CDS             1708..2289
                     /locus_tag="VGQ24_01510"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020046524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEV8453535.1"
                     /translation="MSDYFVHESSYVDDGAVIGRGTKIWHFSHIMPGAVIGERCNLGQ
                     NVVVMPGTRLGNNVKVQNNVSIYEGVVLEDDVFCGPSCVFTNVVNPRSHVSRKSEYQR
                     TLVRRGASIGANATILCGVTLGEYSFIGAGAVVRSDVPPFALMVGVPARRVGWMCQCG
                     VRLQLRDGRGACAACGATYRESEAVLRQIDPPR"
     gene            2314..>2660
                     /locus_tag="VGQ24_01515"
     CDS             2314..>2660
                     /locus_tag="VGQ24_01515"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HEV8453536.1"
                     /translation="MVPRSIAPALGLHRAEARALSNDRSRHTGSEQGLGFLVNVPLLD
                     LVAQYRTIKDDVLTAVMAVIERQGFIMGPEVAQLEAEIARLSHARHGIACASGTDALL
                     LPLKALDLRPGDE"
BASE COUNT          450 a          810 c          930 g          470 t
ORIGIN      
        1 ggctccacga cgatgtactg caaccctatg tggcggtgaa agaggcggtg tttcccttca
       61 gcaagcttcc gggagtggac ctcatccttg ggccggaaat gcgctcgacc ggagaggtca
      121 tgggcatcgc cgattcattc ggaatggcgt ttgccaaagc gcagatctca gcggacggag
      181 ctctcccact ggcgggatcg gtgttcgtca cggtcaacga tcacgacaag gcgaacgtga
      241 cgccgatcgc ccgccgcttc catgccctcg gtttcaagat gcttgccacc gagggcaccg
      301 cccgctatct ccgcgcgcgg ggtattccga cggagcgggt gctcaaggtc tatgagggcc
      361 gtcccaacgc catcgacctg ctggtgtccg ggcagatcca gctgttgatc aacacgccgc
      421 tgggcaagct cacccaacag gacgattaca ccatccggcg cgcggcactc caacatcggg
      481 ttccctacac gaccacgctc tcggctgcct ctgccgcctg cgatgcgatc atcgcgcttc
      541 gaagccgcgc gggtgaggtg aggccgctgc aggaatggca cgcactggca cgagagatgt
      601 cgcccgagtg gacggggtga ccgcacggga caaagggttc atcgcggcac tccgggagcg
      661 ggtccgcggg agggtgcggg aggacgaccc ggttgcgcga tactccacgt accggatcgg
      721 cggtcccgcc actgtgctgc tcccggccac cccgcaggat gtcgccgcgg cgctgatgct
      781 ggcacatgag tccggcgtac cctggtttgc cgtcgggctc ggctcgaaca tcctgcttcc
      841 ggatgaaggg ttggacgccc tggtcatccg cctcggtaag ggactcgacg cggtgcggcg
      901 cgacggagat tcctggacgg tgggtgcggg gcttccggcg ccgctggcgg cccgccggac
      961 agcggaggcc gggtttgccg gcctgcacat cttcgtcggc gtgccgggaa ccgtgggtgg
     1021 gggcgtctac atgaacgccg gttgccatgg cggggactgg tccgaggtgg tgcagcgagt
     1081 caccgtggtc gatgcaacgg ggcgcgacag cgtcctggag cgcccggaga ttcccttcac
     1141 ctaccgccgg agcggcctcg aggggaggat cgtgctggag accacggtcc aactccggca
     1201 ggaagagcag gggaagctac aggaggctgt ggccgaaatg ttcgagtggc gccagcgggg
     1261 tacaccgttc aatcagccct gttgtggcag cgtgttcaag aatcccgcgg ggccgagttg
     1321 gaagcgggag gatggctctc ggacggccgg gcaactcatc gaggcggcgg ggctcaaggg
     1381 gttcgccatc gccggcgcgc aggtgtcgcc gatgcacgcc aactatttcg tgaacaccgg
     1441 cgaggcgacc gctgccgacg tgcggcgcct gatcgagcac gtgcagagcg tggttctgga
     1501 gcgcttcggg gtacgcctgg agccggaagt aaagttgatc ggagcgtccg gcgaatacct
     1561 gaataaagag tgatcgtgga agcccattcc catgttcctc atcccgagcg gagcgaggga
     1621 cctacccagc cagttgccga agcacgcggc caaggtccct cactgcgttc gggatgagga
     1681 gtctggggtt gaagcggagc attgcagatg agtgactatt tcgtccacga atcctcctac
     1741 gtcgacgacg gcgcggtgat cggccgggga accaagatct ggcacttcag ccatatcatg
     1801 cctggcgcgg tcattgggga gcgctgcaat ctggggcaga atgtggtggt gatgcccggc
     1861 acccggctgg gcaacaatgt gaaggtccag aacaacgtgt ctatctatga aggggtcgtg
     1921 ctcgaggatg acgtgttttg tgggccgagc tgtgtgttta ccaacgtggt caacccccgg
     1981 agtcacgtct cccggaagtc cgagtaccag cggactctgg tgcgccgggg tgcctcgatc
     2041 ggggccaatg ccaccatcct ctgcggtgtg accctgggcg agtacagctt catcggcgcg
     2101 ggggccgtgg tccggagcga tgtcccgccc tttgccctga tggtcggtgt gccggcccgg
     2161 cgggtcggct ggatgtgcca gtgcggggtg cggctccaac tcagggacgg caggggggca
     2221 tgcgccgcct gtggggccac ctatcgggaa agcgaggcgg ttcttcgcca gattgaccca
     2281 cctcgctgat taggctaagt tccctagctg ccgatggttc cgcgttccat cgcgcccgcg
     2341 ctcggcctcc atcgggctga agcacgggcg ctttccaatg accgctcccg acacacgggg
     2401 agcgagcaag gcttagggtt tctggtgaac gtgcccctgc tggatctggt ggcgcagtat
     2461 cgcacgatca aggatgacgt gctcaccgcc gtgatggctg tgatcgaacg gcagggcttc
     2521 atcatgggtc cggaggtggc gcaactcgag gccgagatcg cacggctttc ccatgccagg
     2581 cacggcatcg cctgcgccag cggaaccgac gcgctgctcc ttcccctcaa ggcactcgac
     2641 ctccggccgg gtgacgagat
//
LOCUS       DASYRV010000068         3129 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2104717, whole genome shotgun sequence.
ACCESSION   DASYRV010000068 DASYRV010000000
VERSION     DASYRV010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3129
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2104717"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(203..1177)
                     /locus_tag="VGQ24_01520"
     CDS             complement(203..1177)
                     /locus_tag="VGQ24_01520"
                     /inference="COORDINATES: protein motif:HMM:NF013694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEV8453537.1"
                     /translation="MGTMRLIVESCDRNLPAEVTVDRLTELLADRSRQLWLDISDPGE
                     AEVALLRRAFGFHELALEDVTRPHERPRCDAYAGYYFIVIYAAEHAGNAFVPRELNLF
                     WGENYLVTIHRRPSAVLSVLDETRRRWERNEQRQSHGVACLVYTLFESLVDGYFVVQD
                     RVRERIAGIEEAILQGEEGAAADLFRLRKELLRVPPLLSPTTHVLEEVLRRERMIPDV
                     LRPYYADVQDHAVHVLAELDTYRDLLGAALDTHVFYAFNRLAKIMQRLTAITVIILVP
                     NFVASIYGMNFIHLFPPSDWQYGFVAVVAFLGLMVIWGFVHSRMLRWL"
     gene            1315..2784
                     /locus_tag="VGQ24_01525"
     CDS             1315..2784
                     /locus_tag="VGQ24_01525"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEV8453538.1"
                     /translation="MHVRGISVALLLSAASAASAQSAGSFEINGFGQYTRFDDTLRIQ
                     EEAGGGGSLAFFPVTNVAVEAEGGYTRTHSNVAGNPPVSNIPLRARLSYHIPIGGYSS
                     SVRLGVGYVRNLYRKSLNFDDNGFTGIFGVRVGFTENLGLRLDAIADYVRSPEGGRAD
                     NYVNWGGQAGLSLLFGNSSDRDEDGVANKADRCPSTPGGKAVNPSGCAASQLDTDRDR
                     VNDELDRCPNTPAGESADTNGCSAGQKDADQDTIGDTRDRCPGTPAGERPDAEGCSPS
                     QKDDDKDGVMNAADRCADTRPGERVDIAGCPAAPRDSDRDGVADPADQCPNTPAGEPV
                     NASGCPRDLDTDGVSDARDHCPSTPTGQPVDANGCPILFQKGARSVVLRGVTFQTGKA
                     TLTPVARAVLRDIATQLVENPEYRVQISGHTDNTGSRAANLRLSLARARTVETFLEAN
                     GVPPRQVSSKGFGPDVPVASNKTAAGRAKNRRVELVRTN"
     gene            complement(2822..>3129)
                     /locus_tag="VGQ24_01530"
     CDS             complement(2822..>3129)
                     /locus_tag="VGQ24_01530"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEV8453539.1"
                     /translation="QTVLRALQEVESSLVRYRTSRTRVERIQDAASASERAAELARLR
                     FAGGVADFLQVLDAERTQLEAEDQLAQGRTEAATAYAALYKALGGTWPAVNGADPKR"
BASE COUNT          616 a         1015 c          998 g          500 t
ORIGIN      
        1 gttcaaccgc acccccagag gacgggcaac agctttgcca gaaacgagat agtacggggt
       61 cgatggggcg acaggagcag gtactaggcc atagacttaa acccaatgtc tacaaggtta
      121 tggctcacgg atgggtaacc cgctgtctgg cagattccat gagtttcact ggttctgagc
      181 cggatgctga gccgaggcag catcacagcc accggagcat gcgtgagtgg acgaaccccc
      241 aaatgaccat caggccaaga aaggcgacta ctgcaacgaa gccgtactgc caatcgctcg
      301 gcgggaacag atgaatgaaa ttcatgccgt aaatgctggc gacgaagttg ggcaccagga
      361 tgattacggt aatggccgtc agccgctgca tgatcttggc cagccgattg aaggcataga
      421 agacgtgggt atcgagcgcg gcgcccagga gatcgcgata cgtgtccagt tccgccagca
      481 cgtggacggc atggtcctgc acgtcggcgt aataaggccg gagcacgtca gggatcatcc
      541 gctcccggcg gagcacctcc tccagtacgt gggtcgtggg cgagaggagc ggaggcactc
      601 ggagcagctc cttccgtagc cggaacagat cggcggcggc tccctcttca ccttgtagaa
      661 ttgcctcctc gatacccgcg atccgctccc ggacccggtc ctgcactacg aagtagccat
      721 ccaccaggct ctcgaacagg gtatacacca gacaggcgac cccgtgggat tgccgctgct
      781 catttcgctc ccagcgccgt cgggtttcat cgagcaccga gaggacggca ctgggtcttc
      841 ggtggatcgt caccaggtaa ttctcacccc agaacaggtt cagctctcga ggcacgaacg
      901 cattgccggc gtgctccgcg gcatagatca cgatgaagta gtaaccggcg tacgcgtcac
      961 accggggccg ctcgtgcggt cgggtgacat cctccagcgc cagctcgtga aagccgaacg
     1021 cccgccgcag cagcgcgact tcggcttcgc cgggatcact gatgtcgagc cagagctggc
     1081 gggagcggtc agccagcagc tcggtgagcc ggtcgacggt gacctccgcc ggcaggtttc
     1141 ggtcacagga ctcgacaatg agtctcatgg tgcccatggt gcctccgcgt ggcttcgtgg
     1201 ggtgaacctc aagttgcagt gtcctgggga aatacgcact accccgccag tggcggatgg
     1261 aggccgaacc tcctaggttt ttcgcacccc ccgtctcata ccacgagcac ccgcatgcac
     1321 gtgcgtggaa tctctgtggc gctgctgctc agcgccgcgt cggcagcctc cgcccaatcc
     1381 gctggtagct tcgagatcaa cggcttcggc caatacaccc ggttcgacga cacgctccgg
     1441 attcaggagg aggccggcgg aggcgggtct ctggccttct tcccagtgac gaatgtcgcc
     1501 gtcgaggccg agggcggcta caccagaacc cacagcaacg tcgccggcaa tccgccggtc
     1561 tccaacatcc cgcttcgcgc ccgactcagc tatcacattc cgattggcgg ctactcgtcg
     1621 tcggtgcggc tcggcgtcgg ctacgtccgg aacctctacc gtaagtccct gaacttcgac
     1681 gacaacggct tcaccggaat attcggtgtc cgggttggct tcactgaaaa tctggggttg
     1741 cggctggatg ccatcgccga ctacgtccgg agcccggagg gcgggcgagc ggataactac
     1801 gtcaactggg gcgggcaggc gggcctgagc ctcctattcg gaaactcgtc cgaccgggac
     1861 gaggacggtg tcgcaaacaa ggccgatcgc tgtcccagca ccccgggcgg gaaagccgtg
     1921 aatccatcgg gctgcgctgc cagccagctc gacaccgacc gggaccgggt gaacgacgag
     1981 ctcgatcggt gccccaatac ccccgccggt gagtcggcgg acaccaacgg atgctccgcc
     2041 ggccagaagg atgccgatca ggacacgatc ggcgatactc gagaccgctg tcccggaaca
     2101 ccagccggag agcggccgga cgccgagggc tgctctccca gtcaaaagga cgacgacaag
     2161 gatggcgtga tgaacgccgc agaccgctgc gccgacacgc ggccgggtga gcgggtcgat
     2221 atcgccgggt gcccggcagc accgcgcgac agtgaccgcg atggtgtcgc cgaccccgct
     2281 gaccaatgcc cgaacacgcc tgccggtgag ccggtgaatg cgagcggctg cccccgggac
     2341 ttggatacgg acggcgtttc ggatgcgcgg gaccactgcc ccagcacgcc caccggccaa
     2401 ccagtcgatg cgaacggctg cccgattcta ttccagaagg gagcgcgaag cgtcgtgctc
     2461 cgcggggtga ccttccagac tggaaaggcg accctgacac cggttgcgcg agcagtcctc
     2521 agggacattg caacccagct ggtggagaac cctgagtacc gggttcagat ctcgggccat
     2581 accgacaaca ccggctcccg ggcggcaaat ctccgcctgt cactggcgcg agccagaaca
     2641 gtcgagacct tcctcgaggc caacggagtc ccgccgaggc aggtgtcgtc caagggattc
     2701 gggcccgatg tgccggtcgc gtcgaacaag accgccgcgg gccgagccaa gaaccggagg
     2761 gtcgagctgg tccgaacgaa ttgagtgaca acacgtgcct tcgtggtgca taggcacggg
     2821 actaccgttt gggatcagca ccattgacgg cgggccaggt accgcccagc gccttgtaca
     2881 gcgccgcgta ggccgtcgcg gcctcagtcc tgccctgcgc gagctggtct tcggcctcga
     2941 gctgagtacg ctcggcatcc agtacctgga gaaagtcagc cacgccgccg gcgaagcgaa
     3001 gccgggcaag ctctgcggcc cgctcgctgg ccgaggccgc gtcctgaatc cgttccactc
     3061 gggtccggga cgtccgataa cgaaccagcg acgactcgac ctcctgcaag gcgcgaagca
     3121 ccgtctggt
//
LOCUS       DASYRV010000069         1711 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_859970, whole genome shotgun sequence.
ACCESSION   DASYRV010000069 DASYRV010000000
VERSION     DASYRV010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_859970"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(44..724)
                     /locus_tag="VGQ24_01535"
     CDS             complement(44..724)
                     /locus_tag="VGQ24_01535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453540.1"
                     /translation="MRILTLLGLTAVIAAPVLAQGNPADPDKKVAGGGTMPPGWFARL
                     EDTTASIANVKFVTMGPGLHFTTGPSGIYWRDSDAVTGSFHTVASFTQTKAPPHPEAY
                     GLFVAGKNLKDSTATYVYLIVRGDGMFSIRQGGRAGSRSTDLTPGGARNGWLANAAVV
                     KQDSAGKATNKLEISGDAATKKLTFKVNGQTVAELDAPGGSVAGLVGIRMNHNLDVHV
                     ADFAVHKM"
     gene            829..984
                     /locus_tag="VGQ24_01540"
     CDS             829..984
                     /locus_tag="VGQ24_01540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453541.1"
                     /translation="MRTFGIVFATLGAGMILFALTYVTLVVGGLVNAMVVLMAGPLVD
                     RLLARRR"
     gene            1451..>1711
                     /locus_tag="VGQ24_01545"
     CDS             1451..>1711
                     /locus_tag="VGQ24_01545"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEV8453542.1"
                     /translation="MNLSDLAIKRPVFASMTSAALVLFGLIGFKQLAVREFPDVDPPI
                     VSVSVTLRGANPQVMESAVTDVLEEQLASLEGLRTMTSNSSEQ"
BASE COUNT          277 a          558 c          563 g          313 t
ORIGIN      
        1 cctgccacct gccacctgcc acctgccacc taccacctac cacctacatc ttgtgtaccg
       61 cgaagtccgc tacgtggaca tcgaggttgt ggttcatccg gatgccgacc agaccggcga
      121 cgctgccgcc gggcgcatcg agctcggcga cggtctggcc attgaccttg aaggtcagct
      181 tcttggtcgc cgcgtcgccc gagatctcga gcttgttggt ggccttgccc gccgagtcct
      241 gcttgaccac cgcggcgttc gcaagccagc cgttccgggc gccacccgga gtgaggtcgg
      301 tggagcggga tcccgcacga cctccctgcc ggatcgagaa catcccatca ccccgaacga
      361 tcaggtagac gtaagtcgcg gtggaatcct tgaggttctt tccggccaca aagagcccgt
      421 acgcttccgg gtgggggggc gctttggtct gcgtgaacga cgcgacggtg tggaacgagc
      481 cggtgaccgc gtcactgtcg cgccagtaaa tccccgaggg gccggtagtg aaatggagac
      541 ccgggcccat cgtcacgaac ttcacattgg cgatgctggc cgtggtgtcc tccagccggg
      601 cgaaccagcc ggggggcatg gtgccgccgc ccgcgacttt cttgtcggga tcggctggat
      661 tgccctgagc gagcacggga gcagcgataa cggcggtgag acccagcaga gtgagtatgc
      721 gcataccagt cacctcggac aaaaagaagg gcgaaacggg acgatcccgc ggcggttgcc
      781 agcctgatgg ggacgcggat aacatagttc ttcaccacag ggggggccat gcgaaccttc
      841 gggatcgttt tcgcgacgct gggagccggc atgatcctgt tcgccctgac ctacgttacc
      901 ctggtggtgg gcggcctggt gaacgcgatg gtggttctga tggctggccc gctggtggac
      961 cggctgctcg cgcggaggcg gtaggcccct ccggagcggc cggtttgggg gctggcagcg
     1021 tgacggcccg cacggccccc tcgtagttga tcttgaggct cgcgagtccc tctcgcaatc
     1081 cccgcacctt catccgcttg tctccgccgc ggcgggccag catgcccatc atccccatgg
     1141 tgtccgccaa ggcggtctga ttgatcgaat tggcggcagc cttcccctca tccaggaggc
     1201 gacacagtcg ccggatcatg gactcatccc cccggagcgc cgcgagctcc tcgatcaggc
     1261 ggtgtgccgc ttcgaaccga ggcggcaggg ttgccagcac ctcgagttgc tgctgttgct
     1321 gggacgtcag cttgtcggcc atggtccaga gcgctatgtc tcaacgagtt ggagtgcgcg
     1381 gtcgtaagag aaagatgccc tcccggcgtt ccgggcgggc ccccttatcc cgctccggcc
     1441 ttgcaggcaa atgaaccttt ccgacctcgc gatcaagcgg cccgtttttg ccagcatgac
     1501 cagcgccgcg ctagtgctgt tcgggctgat cggcttcaag cagctcgcgg tgcgcgaatt
     1561 ccccgacgtg gacccgccga tcgtctcggt atccgtcacc ttgcgggggg ccaacccgca
     1621 ggtcatggaa tcggcggtga ccgacgtgct ggaggagcag ctggcctcgc tcgaggggct
     1681 gcgcacgatg accagcaaca gctccgagca g
//
LOCUS       DASYRV010000070         4028 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1689851, whole genome shotgun sequence.
ACCESSION   DASYRV010000070 DASYRV010000000
VERSION     DASYRV010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4028
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1689851"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..698)
                     /locus_tag="VGQ24_01550"
     CDS             complement(6..698)
                     /locus_tag="VGQ24_01550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453543.1"
                     /translation="MATRIIFNGQEYAGTNAMPEAVRKSYLDALAKFAEDKNRNGIPD
                     ILEPGSAGQVIGIQHSSITVNGRTYESVEEMPALARILYEHAMGKMGASRTGLPTSAA
                     AIRGLRPTSQSNEQPAPADLIRAVDSGRRAIEHVIQLLLGFMAAFIFTGAVFIMLEMD
                     RGSQAKERLFVAIIALVLLGTLDTQATRLIKRRLPLSLGTTEVERRYSGASVVLMLAA
                     AVILIGLALLLP"
     gene            complement(718..2595)
                     /locus_tag="VGQ24_01555"
     CDS             complement(718..2595)
                     /locus_tag="VGQ24_01555"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0043138 - 3'-5' DNA helicase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HEV8453544.1"
                     /translation="MTDMMAEARRLLQHHFGYPDFRPAQAPILNSVLQGRDTLAILPT
                     GGGKSICFQIPALVLGGLTVVVSPLISLMQDQVEAAQARGLPAGCLNSSLGMAEREAV
                     RLSISDGSLRLLYVSPERLERLSVQLQSHGIQARLLVVDEAHCIAEWGHDFRPSYRKL
                     SRARVRLGGPQTVALTGSATAEVRNEIARSLRLRTGFQLHLGSFDRPNLWFGAVRVTT
                     ERERLEALLQLLRGDDVMAIVYAPTRSTTEAVARALCNAGHRAAPYHAGLTKSRRVAT
                     LDDFLRDRIDVVVATCAFGMGIDKPNVRLVVHWTPPPTPEAYYQEAGRAGRDGDFARC
                     VLLWRKADTDLHRRQLEVTFPSRRLLERIWSGTKGQVGIPRNVLEAAERLRRELRPER
                     GPVDWRPVVARRRGAEARIQAVDDYARTSRCRRASLVGYFGEQLDGCAGCDRCGKEPK
                     SAPLDPEIAARLARLRNALAGRKTVWGGCPLEPQVLLWLAKSPPATASTLADVPGVGP
                     ALTERLGGAILGALASGKANGTAISHDPLFSALETWRADMARTMGVPAYMVLTDAALR
                     RLVEARPSTRQDLAKVRGIGPRTLGKFGEELLRLSQPRCRSTEENRRHILAQRLGSEQ
                     I"
     gene            complement(2765..3331)
                     /locus_tag="VGQ24_01560"
     CDS             complement(2765..3331)
                     /locus_tag="VGQ24_01560"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEV8453545.1"
                     /translation="MRRASESGGLSKAIAAGVVAVALLASLAGAQTPVEFGLGAGISI
                     PSGATSDGLKTGWHGTALVQFKPAASPVGFQVDGSYHQLGFDGGGGKDQIISGTANAV
                     YAFSVAPETQFRPYLIGGGGVYNVKAKPDVGASISDTKFGINVGAGFNIRTSGIGVFV
                     EGRFHNVFVPGSDFHYIPITVGVRFGGS"
     gene            complement(3396..>4028)
                     /locus_tag="VGQ24_01565"
     CDS             complement(3396..>4028)
                     /locus_tag="VGQ24_01565"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEV8453546.1"
                     /translation="NCGTLPCPRLTWISSHFGKEEGMRVFAKGFAALTVALLLSAPAL
                     RAQGAEFSLGGGVGFPLGSFDDATKVGWHGLGAVSFVPNGSPVGIQFDGQYQQYKLDG
                     SASLKDRFIMGTGNVVFKFKTSEESTFRPYLIGGGGVYNFKTTGTDDLGGVIDTDNST
                     TKFGLNAGAGFDFKAGAVGLFIEGRFHDVFTSGENLKFLPITVGLRFGGS"
BASE COUNT          755 a         1324 c         1230 g          719 t
ORIGIN      
        1 atatctcagg gcaacagcag tgcgagcccg atgagtatca cggccgctgc aagcatcaga
       61 acgacactgg ccccgctgta gcggcgctcc acctctgtgg tccctaagct caacggcagg
      121 cggcgtttta tcaaacgggt cgcctgagtg tccagggtac cgagaagcac gagcgcgatg
      181 atcgccacga acagtctctc tttcgcctga gagccgcggt ccatttcgag catgatgaag
      241 acagctcccg taaagatgaa cgcggccatg aaaccgagaa gaagttggat cacgtgttcg
      301 atcgcacggc ggccgctatc gaccgctcgg atgagatcag cgggagccgg ttgttcattt
      361 gactgggatg tcggcctcag accacggatc gctgccgcgg aagtcggaag tccggtgcgg
      421 ctcgcgccca tcttgcccat cgcgtgctcg tagaggattc gcgcaagcgc cggcatttcc
      481 tcgacgctct cgtaggtccg tccattgacc gtgatcgagg agtgctggat gccgatcacc
      541 tggccggctg atcccggttc gagaatgtcg ggaatgccgt tccggttttt gtcttccgcg
      601 aatttggcga gcgcgtcgag ataagacttc cggaccgctt ccggcatggc gttggtgccc
      661 gcgtattcct gtccgttgaa gatgatgcga gtcgccattg agtcctcact ctggacgtta
      721 tatctgctcg gagccgagcc tctgagccag gatatgccga cggttctcct cggtactcct
      781 gcaccgcggc tggctgaggc gcagcagctc ctctccaaat ttcccgagcg tccggggacc
      841 gatgcctcgc accttggcca ggtcctgccg agtcgacggt cgagcctcca ccagtcttct
      901 gagcgcggca tcagtgagca ccatatatgc tggaacaccc attgtccgcg ccatatcggc
      961 ccgccaggtc tccagtgccg agaaaagcgg atcatggctt atagcggtcc catttgcttt
     1021 acctgaggcg agagcgccca gaatggcgcc acccagccgc tccgtgagtg ccgggccgac
     1081 gcctggcaca tcggcgagtg tcgaagcagt ggctggtggt gatttggcga gccaaagaag
     1141 tacctgcggc tcgagcgggc aacctcccca taccgtcttg cggccggcga gcgcgtttcg
     1201 gaggcgggca aggcgtgcgg caatctcagg atccaacggg gccgacttgg gttccttgcc
     1261 gcacctgtca catcccgcac agccgtccag ctgctctccg aagtagccca ccaggctggc
     1321 tcgccggcag cgtgatgtgc gcgcgtagtc gtccaccgcc tgtatccggg cctcagcccc
     1381 cctccggcga gcaaccacgg gccgccagtc aaccgggcct cgctcgggtc gcaactcgcg
     1441 gcgcagccgc tcggccgcct cgaggacatt cctggggatg ccgacctgtc ccttggtccc
     1501 ggaccagatc cgctcaagca ggcggcgcga tggaaaggtg acctccagct ggcggcggtg
     1561 cagatcggtg tccgctttgc gccacagtag cacgcaccgg gcgaagtctc catctctccc
     1621 agcccgccct gcctcctggt agtacgcctc cggcgtaggg ggcggggtcc agtggaccac
     1681 caggcgcacg ttcggcttgt cgatccccat gccgaaggca caggtggcga ctacgacatc
     1741 gatccgatcc cgcaggaaat cgtcgagcgt ggcgacgcgc cgtgacttgg tgagccctgc
     1801 gtggtacggc gccgcacgat gccccgcatt gcagagagcg cgggccaccg cctcggtggt
     1861 gcttcgggtg ggcgcgtaca cgatggccat gacatcatcg ccccgcagca gctgaagcag
     1921 tgcctccagc cgctcccgtt ccgtggtgac ccgcaccgcg ccgaaccaga ggttgggacg
     1981 atcgaacgag cccaggtgga gctggaagcc cgttcggagc ctgagactgc gggcgatctc
     2041 attccgcacc tccgccgtgg cgctgccggt gagtgcgacc gtctgggggc cgcccagccg
     2101 gacccgcgcc cgggagagct tgcggtaact ggggcggaag tcatgccccc attcggcaat
     2161 gcagtgggcc tcgtcaacca ccagcagccg ggcctgaatt ccgtggctct ggagctgcac
     2221 gctcaatcgt tccaacctct ccggcgagac atacagcaga cgcagtgagc cgtcggagat
     2281 cgacaaccgt acagcctccc gctctgccat cccgaggctg ctattgaggc acccagcggg
     2341 aaggccgcgg gcctgcgccg cttcgacctg gtcctgcatg agcgagatca gaggcgaaac
     2401 gacaaccgtg aggccgccga ggacgagcgc gggaatctgg aagcagatgg acttgccccc
     2461 gcccgtgggc agaatggcga gcgtgtcccg cccctgaagg acggagttga gaatgggagc
     2521 ctgggccggg cggaaatcgg gatagccgaa gtggtgctgg agcagccggc gtgcttccgc
     2581 catcatatcg gtcatggcgc gaagaatggt gcggcgacct cacaggcttg tgaccagaag
     2641 gccgcgagcc ggagcgccga agggcgagaa actaataggc ggcggagagg ctagcctttc
     2701 gcctctaccg ccgcctgacc caccgccgct ttatctaccg ccgctttacc taccgccctc
     2761 tcgctcagct gccgccgaat cgaacgccga cggtaatcgg aatgtagtga aagtccgagc
     2821 cgggcacgaa cacgttatgg aaccggcctt ccacaaagac acctatgccc gacgtcctga
     2881 tgttgaatcc agcacccaca ttgatgccga acttcgtgtc ggaaatcgag gccccaacgt
     2941 ccggtttggc tttgacgttg tagactccgc caccaccaat caggtaggga cggaattggg
     3001 tctcgggtgc aacggagaac gcgtacacgg cgttggctgt gccactgatg atctggtcct
     3061 tcccgccgcc gccgtcaaag ccgagctgat ggtatgatcc atctacctgg aaaccaaccg
     3121 ggctcgcggc cggcttgaac tgcaccagcg cagttccgtg ccatccggtc ttgagcccat
     3181 cactggtcgc gccggacggg atcgagatgc ccgctcccag gccgaactcc accggagttt
     3241 gcgcgccggc cagcgatgcc agcagagcaa ccgcgaccac gccggccgca attgccttac
     3301 tcagtccacc actttccgac gctcgcctca tatgctccct ccggtagtga ccatcttatc
     3361 cgttctgcgt gcgagaacgg cagcaccgat cgggttcagc tcccgccgaa gcgcagaccc
     3421 accgtgatgg ggaggaactt caggttttca ccagatgtaa agacgtcgtg gaaccggcct
     3481 tcgatgaaca agcctaccgc ccccgccttg aagtcgaacc ctgcaccggc gttcaggccg
     3541 aacttcgtcg tggaattatc ggtatctatg actccgccaa gatcgtccgt accggtcgtc
     3601 ttgaagttgt acacaccacc accgccaatg aggtagggcc ggaacgtact ctcttcggag
     3661 gtcttgaact tgaacacgac gttcccggtt cccatgatga agcggtcctt caacgacgcc
     3721 gacccatcca gcttgtactg ctgatactgc ccgtcgaatt ggatgccgac cggggagccg
     3781 ttcggcacga acgacaccgc tcccagacca tgccatccta ctttggttgc atcgtcgaaa
     3841 ctcccgaggg ggaatccaac gccgccaccc aaagagaact cagcgccctg cgctctaagc
     3901 gcgggggcgc tcagcagcag tgcaacagtg agcgctgcaa agcccttcgc gaaaacccgc
     3961 ataccctcct ccttgccgaa gtgactgctg atccaggtca gtcgggggca aggtagcgtt
     4021 ccgcaatt
//
LOCUS       DASYRV010000071        11746 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_638019, whole genome shotgun sequence.
ACCESSION   DASYRV010000071 DASYRV010000000
VERSION     DASYRV010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11746
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_638019"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..4142
                     /locus_tag="VGQ24_01570"
     CDS             <1..4142
                     /locus_tag="VGQ24_01570"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HEV8453547.1"
                     /translation="DLPRTRVSYRLPNLLAGQVVLSAMELDRPIIQLIKHRNGRMNYE
                     EVLGIGKGSKGGKSPLVEFHNVQMTDGTLRIALPWNPPKSARTEASVDSTLRAERAKP
                     GRLIEESSEGLRRVIILANLATKVSRLRIATPDRLPFTIDLDSLATRVNDPGVTLRNA
                     VGRVRIRGDSAVFSLARGALPDTRFSGGGAVTWPRDTVLFDFQVIAPQVNLEDLRWVS
                     PNFPAMSGRAILTARSETGARTAYDVRDLHLRGLLGQVDGELVTITDKRRGLGVRDMN
                     LRLAELDLDAVRPYLDTLPFDGTVTGKLAGSGFLNALDLSLQLAFRDASVPENPLSTI
                     AGEGGVGATRDSGLVFTNFGVRQSDIDLRTVRRVAPAVILPGRLIAVGSLNGPLRNIT
                     FNGTAQHQDLDRPPSLLEGSVHLDTRFETLGLATDVTLDPLSFEGIRRAFPSLKAQGE
                     LRGRFQSRGNLADLMVDASLAGQIGTLDARGTVTVRPPRWGAEDLLLRFSDLNLQALT
                     GRRLPTSLNGELSLSGRADTVDAPEGELQLALSRSRIREFTLDSVHAVAGLHDSLIRL
                     DTAYAVWKGARVGGSGTLGWSAPHVGRMAFTLAADSLIAFDSLLLATTGQARDTSPDS
                     RPLGGTAHASVQLAGSLDTLEMSADARLQDLEWQRIRSPEVTGAFSWIGGQRPQLTAS
                     VGSDSVAVQKWVFHRLGAQARGWADSLDWSAGTGIGPASRVDGTGRWWRHGQTQVALF
                     DSLAFSLPVHRYRVDETFAVTLSDSAPAVSPVTLRAEDGSGVIQLGGRLPGLSAGSLT
                     LRVLGLDLHDVYGLFQRDTTGIAGEIGLDVQVAGTAEAPTIRGTMSVDAARFGDFQAP
                     FLEGVVNYADRRLEANLQLWRTGENVLQVETQLPLDLGFRGVKQRRVEGPLLVHARGD
                     SVDLAILEALTPAVNRVRGTLTADVNVTGTWSAPRFVGGLEIRGGAMSLSGLGVRYEG
                     LQGSARFRGDSLVLNDVSLRSGGSLRIGGSILMEDLTRPVLDLDFRAQEFRAVDVRNF
                     LTLSATGGLRLQGALFHSLLTGDLTANSGVLYFADLVSKRIIDLEDPTIADLVDTTLL
                     RRENLGAKFQNRFLDSLSIQNLRVVLGSDVWLRSAEANIQLGGELQLSKAGKTYTPSG
                     TLDALRGTYTLKIGPVTRDFTVDLGSVRYFGDLNASLDIQARHVVRAVRGEEIPVIAK
                     ITGTLYAPKVSLESTLNPPISETDLVSYLVTGYPANEAARLGQANALETGLAYFSSAL
                     SSELERALIQDLGIPLDLIEIRPGVSRGNRSPSLTQLAAGWQLGRKTFVTLNAGFCPE
                     NLSQFTYSNLGASLEFRFSREWSLLTSIEPTLQSCRRDFGIVISNPYQIGSDIRWERE
                     F"
     gene            4145..5041
                     /locus_tag="VGQ24_01575"
     CDS             4145..5041
                     /locus_tag="VGQ24_01575"
                     /inference="COORDINATES: protein motif:HMM:TIGR00147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEV8453548.1"
                     /translation="MPRALLITNPAAARTAAIAVNTILTTLRRAGWDVEALATGGPGD
                     ARHLAQYGVAEKVDVVAVFGGDGTTMQAAAALVGTDIALGVIPGGTGNLLAGNLRIPA
                     SPARAARALVRAKPRLFDLGRMERPAGPQYFAVACGAGYDARVMAGTLSEHKRRWGMA
                     AYVATTLRLMSELRSTLHSITIDGVEYEANAAMVLVANCGEVIPPFVKLGPGITPDDG
                     LLDVVVVRADNFPQSLRAVWDLLRLTPGASGPDAYVGHVRGREVKVETDRAQPVQLDG
                     EPGGTTPFTATVVPRAIRIMVP"
     gene            5154..6500
                     /locus_tag="VGQ24_01580"
     CDS             5154..6500
                     /locus_tag="VGQ24_01580"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEV8453549.1"
                     /translation="MAGSVLLIDDDVDVLRSIGNYFERLGYEVTRELSGEAGLATFDR
                     LRPEVVILDLGLPGMDGMEVLEHLRQRDASVVLLTGQADVPTAVRAMQLGAENFLTKP
                     VDMEHLAAATARVADKARLRRINEALLVQSAPGHGLDSLGTSSGMQDFAHQVALLAQS
                     ERTTVLLNGESGTGKGWVARMMHDSSPRAKAPFVEVNCAGLNATFLDSELFGHEKGAF
                     TDAKDRKQGLFEIADHGTIFLDEIGDLAPELQPKLLKVLETKTFRRLGGTREITVDVR
                     LVAATNKNLQAEVEGGRFREDLYYRLSVMPLTLPALRDRSREDRLALITRLMGDLRAE
                     LPDGPPALSSEVLERLLVYPWPGNVREMRNVLERALILGRGQPAVSVEHLPGEFRARP
                     GLGDRRHTPLSLEDLERQHIERTLKHHNGNRTRAAIELGISRATLINKIKRYNITS"
     gene            6509..6688
                     /locus_tag="VGQ24_01585"
     CDS             6509..6688
                     /locus_tag="VGQ24_01585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453550.1"
                     /translation="MTKLREHDAMECRACGREERASEGYPCAKCGTFICLLCNFKGVT
                     HCRQCAESTPSEKDS"
     gene            6703..7488
                     /locus_tag="VGQ24_01590"
     CDS             6703..7488
                     /locus_tag="VGQ24_01590"
                     /inference="COORDINATES: protein motif:HMM:NF013073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEV8453551.1"
                     /translation="MSSAIGRAAVAPVLAAPAVRAEQVTQLVLGETASIVERTGEWRR
                     VRLDADGYHGWIHTGYLVEVDDRAAEDWRSRALGWSEGGLVRMDETNVALPLRARMIL
                     EAGAVVLPDGRQGRVSGGSIRRLSEIRAEACTQASESWALKHFLGSPYLWGGVTPWGV
                     DCSGLVQTTFAARGISLPRDSGQQAGCGESISLDAIRPGDLLFFRSESGRGITHVAFA
                     GKADTVVHSTLSCGGMLIESWLPGTRAASLRERLVAVRRLEQR"
     gene            7485..8183
                     /locus_tag="VGQ24_01595"
     CDS             7485..8183
                     /locus_tag="VGQ24_01595"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HEV8453552.1"
                     /translation="MRDKLVLFDIDGTILLTAGAGRRAILAAIGQEVGETLAFDWVRF
                     DGKTDPQIVAELLEAAGQRGPHPSGRVEILCRRYVNLLEHELQQPSARTTVMPGVHAL
                     LDRLEAETGVVLGLLTGNLADGAALKLRSAGLDPTRFRVGAYGSDAANRPDLPAIAAG
                     RAQPFFGRVPSGAEVVIIGDTPADVACGQCIGARALGVATGAYSVADLEACGAHAAFQ
                     DLSDTERVMEAILR"
     gene            8233..8961
                     /locus_tag="VGQ24_01600"
     CDS             8233..8961
                     /locus_tag="VGQ24_01600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453553.1"
                     /translation="MVPELGPSLGRLSDPPAGPTDRGSLDIVLDDIRLDLVTGIFDRA
                     GAARSFAAAGDRHSAVASLGRVAWLELWERAVAAAAQRLADAVNARLRAAGTESRLPA
                     GKLARVLLTAEDVRAIASRLGSGGATFVSALDALEQTVPAAAASGTRGRLGQDEWQRA
                     LAATARRLESSWMALIVAAKREQERWKAEIARVRAWHRPRWPLWLITVVVLAIATYLG
                     LVLGGYLPVPAPLRGFAEFWWSRP"
     gene            8958..9344
                     /locus_tag="VGQ24_01605"
     CDS             8958..9344
                     /locus_tag="VGQ24_01605"
                     /inference="COORDINATES: protein motif:HMM:TIGR00556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HEV8453554.1"
                     /translation="MTVIGVGIDLVDLERIRLLLASKGEQAMTRFFSPHEREYLATRP
                     DATGHAAARIAAKEAVYKAMQILPNARGIGWREIEVSRDQEGRPAIRLHGLAARVSEE
                     SGGLRIQISLTHSALSAGAIAVVEAP"
     gene            9506..11536
                     /locus_tag="VGQ24_01610"
     CDS             9506..11536
                     /locus_tag="VGQ24_01610"
                     /inference="COORDINATES: protein motif:HMM:NF015213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family protein"
                     /protein_id="HEV8453555.1"
                     /translation="MRRLAATAQLAAQEYRIGVENGRIIAAAEVDEARLFLQESRRSA
                     ALLPRDISPIALAQIDSLIHSVDRVAPADSIDERVRRLTGSLSRRLNVVLDEIPNQEP
                     SLARGSVVYQQNCASCHGTMGTGDGPLAKGLEPPPANLTDRSVLLNQSPLDYYRRITI
                     GVVGTAMPAFETRLAPEDRWAAAVYATLLRLPPHAGNVPAALQSFPTTGRMSDTELLA
                     ALGERDTSAGALARVAAVRAFQPDATADVNAQVFSQVRVQLDSTYALARRGDTSASTH
                     AFDAYMTFEQVERGVRARNPGLAAELESAFAALRTRAAGGATATELAAIRRQLDAGLE
                     NAERTLGDALSPTNLFLQSFVILLREGLEAILIVGALMTFLAKMGAGHRKRDIHIGVG
                     AAVGVSVLTALALETVFQITPAKREALEGATMVVATVVLFYVSYWLLSKMEVAKWNHF
                     VKSKVEDALTSGSGLALATAAFLAVYREGFETVLFYKALFLTGGQGGGTMPILGGILV
                     GSVVMVGVYVAINRFGLRLPLKPFFGVTSAFLYYMAFVFAGKGVAELQEGGFIPTTIL
                     AGAPRLPALGIYPTVESLLVQAVLIVLLLVALVWTFVLAPRRLSSAPLFPEARQRKPA
                     PTSIPTPVPQEASLELLRSLERMEADLGEMRAEVERMKTKLTEAPESRARKH"
     gene            11537..>11746
                     /locus_tag="VGQ24_01615"
     CDS             11537..>11746
                     /locus_tag="VGQ24_01615"
                     /inference="COORDINATES: protein motif:HMM:NF015682.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453556.1"
                     /translation="MEFTTADLCDAFPDLVQVAQPLFREYGGLEKFAGPIETLQVHDD
                     NTLVRETLETPGRGRVLVVDGGGSLK"
BASE COUNT         1893 a         3803 c         3937 g         2113 t
ORIGIN      
        1 tagacctgcc ccggacgagg gtctcctacc ggctgcccaa tctgctcgcc ggccaggtgg
       61 tgctcagtgc catggagctc gaccggccca tcattcagct gatcaagcac cgcaatggca
      121 ggatgaacta tgaggaggtg ctcggcatcg gaaagggctc gaagggcggc aagtcccccc
      181 tggtcgagtt ccacaacgta cagatgacgg acggtaccct gcgcatcgcc ctgccatgga
      241 atccacccaa gtcagcgcgt accgaggcca gcgtggactc gacgctccgg gctgaacgag
      301 ccaagccggg ccgcctcatc gaggagagtt ccgagggcct gcgccgggtg atcatcctcg
      361 cgaatttggc gaccaaggtc tcccgtctgc gtatcgccac accggaccgg ctgccgttca
      421 ccatcgacct cgattcgctg gccacccggg tgaacgaccc cggggtcacg ctccgcaacg
      481 cggtgggccg ggtccggatc cggggcgata gcgctgtgtt cagcttggca cggggggccc
      541 tgccggacac ccgcttctcg gggggtggcg ccgtgacctg gccgcgcgac accgttctgt
      601 tcgacttcca ggttatcgcg ccgcaggtga atctcgagga tctgcgctgg gtctccccca
      661 actttccggc catgagtggc cgtgccatcc taaccgctcg ctcggagacc ggtgcccgga
      721 cggcatacga cgtccgcgac ctgcacctcc gcgggctgct gggccaggtt gacggcgagc
      781 tggtgaccat caccgataag cggcgcgggc tgggtgtccg agacatgaac ctccggctcg
      841 cggagctcga tctcgatgcg gttcgaccgt atctcgatac cctgccgttc gacggcacgg
      901 tgacgggcaa gctggccggc tcgggcttcc tcaatgcgct cgatctgagt ctccagttgg
      961 ccttccggga tgcgagcgtg ccggagaatc cgctgagcac gattgccggc gaaggcggcg
     1021 ttggggcaac cagagacagt ggtctggtct tcaccaactt cggcgtgcgg caatcggaca
     1081 tcgacctgcg caccgtgcgc cgcgtcgctc cagccgtcat tcttcccggc cggctcatcg
     1141 cggtgggctc gctcaatggg cctctccgta acatcacgtt caacggcacc gcgcagcacc
     1201 aggacctgga tcgccctccc agcctgctcg aggggtcggt tcacctcgat acccggttcg
     1261 agactctcgg ccttgccacg gacgtgacgc tcgatcctct ctcgttcgag ggcatccggc
     1321 gggctttccc atcgttgaag gcccagggtg agctgcgcgg ccggttccag agccggggaa
     1381 atctggcgga cttgatggtg gatgcctccc tggctgggca aataggcaca ctcgatgccc
     1441 ggggcaccgt gaccgtacgg cccccgcgct ggggggcgga ggatctgctg ctccggttct
     1501 ccgatctcaa cttgcaggcg ctcactggcc gaaggttgcc gaccagcctg aacggggagc
     1561 tctcgctcag cggaagagcc gataccgtag acgcacccga gggagagctg cagctcgccc
     1621 tgtcgaggag tcggatccgg gagttcacgc tggacagcgt ccacgccgtg gcggggctgc
     1681 acgacagtct gatccggttg gatacggcct acgcagtctg gaaaggcgcg agagtcggag
     1741 gatccggcac gctgggatgg agcgcgcccc atgtcgggcg gatggcgttc accctcgcgg
     1801 cggacagtct catcgcgttc gattccctgc tgctcgcgac gaccgggcag gcccgcgaca
     1861 cctcgccgga tagccgccca cttggcggaa ccgcgcatgc gagcgtgcaa ctggcgggca
     1921 gcctcgatac cctcgagatg agcgcagacg cacggctcca ggatctcgag tggcagcgca
     1981 ttcgttcgcc ggaggtgacc ggcgcgttca gctggatcgg cggacagcgg ccgcagctca
     2041 ccgcgtccgt cggatcggat tctgtggcgg tgcagaaatg ggtcttccac cggctgggcg
     2101 cgcaggcgcg ggggtgggcg gactcgctcg actggagtgc gggaaccgga atcggtcccg
     2161 ccagccgggt ggacgggaca gggcggtggt ggcgccacgg ccagactcag gtcgcgttgt
     2221 tcgatagcct ggcattcagc cttccggttc accgctaccg ggtggacgag acctttgcgg
     2281 tgacgctgag tgactcggct ccggcggtca gtccggtgac gttgcgggcc gaagacggct
     2341 ctggcgtgat ccagctcggc ggccggttac ccggtttgtc cgcaggttcg ctgaccctgc
     2401 gcgtgctggg gttggatctc catgacgtgt atgggctgtt ccagcgggac acgaccggca
     2461 tcgccggcga gatcggactc gacgtgcagg tggccggtac cgccgaagcg cccaccatac
     2521 gcggcaccat gagcgtggat gcggcccggt tcggcgactt ccaggcaccg tttctcgagg
     2581 gagtcgtcaa ttacgccgac cgaaggctcg aagccaatct ccagctttgg cgaaccggcg
     2641 agaacgtgct ccaagtggag acccagcttc ccctggatct cggcttccgc ggggtgaaac
     2701 agcggcgagt ggaggggcca ctgttggtcc acgcccgcgg cgacagcgtc gatctcgcga
     2761 ttctcgaggc gctgacaccc gcggtgaacc gggttcgagg gacgctcacc gccgacgtga
     2821 atgtcaccgg aacctggagt gcaccccgct ttgtgggggg actggagatc cgcggtgggg
     2881 ccatgtcgct ttccggactc ggggtccgct atgaggggct tcagggcagc gccagatttc
     2941 ggggcgactc gctggtgctc aacgacgtgt cgctgcggag cggtggcagc cttcgcatcg
     3001 gcggctcgat cctcatggaa gaccttaccc gaccggtgct ggatctggac ttcagggctc
     3061 aagagttccg tgcggttgac gtgagaaact tcctcaccct ctcggcgacg gggggacttc
     3121 ggctccaggg tgccttgttc cactccctcc tgaccggcga cctcaccgcc aacagcggcg
     3181 tcctgtactt tgccgatctg gtcagcaagc gcatcatcga cctggaagac ccgaccatcg
     3241 ccgacctggt cgacaccacg ctccttcgcc gggagaacct tggggccaaa ttccagaacc
     3301 ggtttctcga ttcgctcagc attcagaatc tcagggtcgt cctgggctcc gacgtgtggc
     3361 ttcgttccgc ggaagccaac atccagctcg gtggagagct tcagctcagc aaggcgggga
     3421 agacctatac cccgtcgggt accctggatg cgcttcgcgg gacgtacacc ctgaagatcg
     3481 gaccggtgac acgggacttc accgtcgatc tcgggtcggt gcggtacttc ggcgacttga
     3541 acgcctccct cgacattcag gcgcggcacg tggttcgcgc ggttcgcggt gaagagatcc
     3601 cggtgatcgc caagatcacg ggcacgctct acgctcccaa ggtgtcgctc gagagcacat
     3661 tgaatccgcc catctcggag actgacctgg tgtcgtacct ggtcaccggc tatccggcca
     3721 acgaagccgc gaggctgggt caggccaacg ccctggaaac gggactggcc tatttctcca
     3781 gcgcgctctc gagcgagctg gagcgcgccc tgatccagga cctcggtatt cccctggacc
     3841 tcatcgagat ccgcccgggc gtctcccgcg gcaatcgcag tccgtccctc acccagctcg
     3901 cggccggctg gcagctcggc cggaagacat tcgtgactct caacgcgggg ttctgtcccg
     3961 agaacctgag ccagttcacc tacagcaatc tcggtgcgag cctcgagttc aggttcagcc
     4021 gggagtggag tcttctcacc agcatcgagc ccacgctgca gtcgtgccgg cgggatttcg
     4081 gcatcgtcat cagcaatcct taccagatcg gttccgatat ccgctgggaa cgagagttct
     4141 agtcgtgccg cgcgctttac tgatcaccaa tccggcggca gcccggacgg cagccattgc
     4201 ggtcaacacc atcctcacta cgctccgacg tgccgggtgg gacgtcgagg ctcttgcaac
     4261 ggggggaccg ggtgatgccc ggcacctggc ccagtacggc gtggccgaga aggtggacgt
     4321 ggtggccgtg ttcggcggtg atgggacgac catgcaggcc gccgcggcgc tggtcgggac
     4381 cgacatcgcg ttaggggtga tcccaggcgg gactgggaac ctgctggcgg gcaatcttcg
     4441 aatcccggcc tcgccggcac gggcggctcg tgcgctcgta agggcgaagc cccgactgtt
     4501 cgacctgggg cgaatggaac ggcctgccgg gccgcagtac ttcgcggtgg cctgcggggc
     4561 gggatacgac gcacgagtga tggcggggac gctctcggag cataaacggc gctgggggat
     4621 ggcggcctac gtggcaacga ccctccggct gatgtccgag ctccggagca cactgcactc
     4681 gatcaccatc gacggcgtcg agtacgaggc caatgctgcg atggttctgg tggccaattg
     4741 cggtgaagtc atccctccct tcgtgaagct ggggccaggt atcactccgg atgacggact
     4801 gctcgatgtc gtggtggtgc gggccgacaa tttcccccag agccttcgcg cggtctggga
     4861 cctgctccgg ctcacgccgg gcgcctcggg gcccgacgcg tacgtgggcc atgtgcgcgg
     4921 gcgggaagtc aaagtcgaaa ccgatcgggc ccaaccagtc cagctcgatg gggagccagg
     4981 gggaaccacc ccgttcaccg cgaccgtagt tccgcgggcg atccggatca tggtgccgta
     5041 gccatggcgt agagacggcg agtgactaat ttctggttac tccgcaacgg cgccgcggct
     5101 ccctagatga tgcggccgat ggcggcaagt ccctgtggct acaaggtgtc caaatggccg
     5161 gctctgttct gcttatagac gatgatgtcg acgttctgcg cagcatcggg aactatttcg
     5221 agcggctcgg ctacgaggtc acccgggagc tgagcggcga ggcaggactg gccacgttcg
     5281 atcggttgcg gccggaggta gtcattctgg atctcggtct ccccggcatg gacggcatgg
     5341 aagtgctgga acacctgcgt cagcgggatg cttccgtcgt tcttttgact ggtcaggccg
     5401 acgttcccac ggctgtgcgt gccatgcagc tcggggctga gaatttcctt acaaaaccgg
     5461 tcgacatgga gcacctggcc gcggcgaccg cccgggtcgc cgataaagcg cgcctgcggc
     5521 gcatcaatga ggcgctgctg gttcaaagtg cgcccggaca tggactcgat tcgctcggta
     5581 cctcgtcggg gatgcaggac tttgcccacc aggtggcctt gctggcccag agcgagcgca
     5641 ccaccgtgct tctgaacggg gagagcggca ccggaaaggg ctgggtcgcg cggatgatgc
     5701 atgactccag cccccgcgcc aaagcgccct ttgtcgaggt aaactgtgcc gggctgaacg
     5761 cgacgttcct ggattccgag ctgttcggcc atgagaaagg cgcctttacc gacgcgaagg
     5821 atcgcaagca gggactcttc gagatcgccg accacgggac gatcttcctc gacgagatcg
     5881 gcgatctggc gccggagctg cagcccaagc tgctcaaggt actggagacg aagactttca
     5941 ggcgcttggg cggtacccgg gagatcacgg tagatgtccg gctggtcgca gctaccaata
     6001 agaacctcca ggcggaggtc gagggaggac gatttcggga ggatctgtac taccgcctga
     6061 gcgtcatgcc actgacactg cctgcccttc gcgaccgctc tcgcgaagac cgcctggccc
     6121 tcattacgcg actcatgggc gatctgcgcg cagagcttcc cgacgggccg ccggctttgt
     6181 ccagtgaggt gttggagcgc ctgctggtgt atccctggcc tggtaatgtg cgtgaaatgc
     6241 ggaacgtact cgagcgggcg ctcatcctgg gccgcggcca gccggcggtg agtgtcgagc
     6301 atcttcccgg cgagttccgc gcccgtcccg gcctgggcga tcgccgccat actcccttga
     6361 gcctcgaaga cctcgagcgt cagcatatcg agcgcaccct gaagcatcac aacggcaacc
     6421 ggacccgggc cgccatcgag ctcggcatat cccgcgcaac gctgatcaac aagatcaagc
     6481 ggtacaacat cacatcctga gtggttcgat gaccaagctc cgcgagcacg atgccatgga
     6541 gtgccgagcg tgcggccgtg aagagcgtgc ctccgaggga tatccttgcg ccaagtgcgg
     6601 gaccttcatc tgtctgctct gcaacttcaa aggggtcacc cactgccgcc agtgcgcgga
     6661 gtccaccccg tccgagaagg attcctgagc gctcccactg ccatgtcgtc ggccatcgga
     6721 cgtgcggctg tcgcaccggt tctggcggcg ccggcggtac gggccgagca agtcacccag
     6781 ctggtgctcg gagagactgc ctcgatcgtg gagcgcaccg gtgaatggcg gcgtgtccgt
     6841 ctcgatgccg acggatacca tggctggatc cataccggct atctggtgga ggtcgacgac
     6901 cgggctgcgg aagactggcg ttctcgtgcg ctcgggtgga gcgaaggcgg gttggttcgt
     6961 atggacgaga ccaacgtcgc gctcccgctc cgcgcccgga tgatactgga ggccggagcg
     7021 gtggtcttgc ctgacggacg ccagggccgc gtgtcaggcg gaagcatccg gcggctgagc
     7081 gagattcggg cggaagcgtg cacccaggct tcggaatcct gggcgctaaa gcattttctc
     7141 ggaagcccct acctgtgggg gggagtcact ccgtggggtg tagactgctc gggcctggtg
     7201 cagaccacgt tcgctgcgcg cgggataagt cttccgcgcg actcaggaca gcaggccggc
     7261 tgcggcgaaa gcatttcgct cgacgcgatc cggccgggtg acctgctctt cttccgcagc
     7321 gagtccggca gggggatcac ccatgtggca ttcgccggca aggcggacac tgtggtccac
     7381 tcgaccctat cctgcggcgg catgctaatc gaatcgtggt tgcccggaac ccgggcggcc
     7441 agtcttcggg agcggcttgt ggcggtacgc cggctggaac agcggtgagg gacaagctcg
     7501 tcctgttcga catagacggg accatcctgc tcaccgcagg cgccgggcgt cgcgccatct
     7561 tggccgccat cggccaagaa gtcggtgaaa ctctcgcctt cgactgggtg cggttcgatg
     7621 gcaagaccga tccccagatc gttgccgagc tgctcgaggc cgccggacag cgtggccccc
     7681 atccctccgg ccgggtcgaa atcctctgcc ggcgatatgt aaacctcctc gagcacgagc
     7741 tgcagcaacc ctccgcgcgc accacggtca tgcccggtgt ccacgcactg ctcgatcgac
     7801 tcgaagccga aactggcgtg gttctcggtc ttctcaccgg caacctggcg gacggcgccg
     7861 ccctgaagct gcggtccgcg gggttggacc ccacgcggtt ccgggtggga gcgtatggct
     7921 cagatgccgc caaccgtccc gatctgccgg ccatcgccgc gggccgggcc cagcctttct
     7981 tcggcagagt tccctcggga gccgaagtcg tgatcatcgg tgacactccc gccgatgtcg
     8041 cctgcggcca atgcatcggc gcgcgcgcgc taggcgtagc aaccggggcc tattcggttg
     8101 ccgacctcga ggcgtgcggc gcccatgccg cgttccagga cctgagtgat acggaacgcg
     8161 tcatggaggc cattctacgg taactctccg gcaatcgccg tgagccttcc acctacttcg
     8221 tccgattcct ggatggttcc cgagctcggt ccgtctctcg gccggctgag cgacccgccc
     8281 gccggcccga ccgaccgtgg ctcactggat atcgtcctcg acgatatcag gctggatctg
     8341 gtcaccggca tcttcgaccg tgctggggcc gcgcgctcgt ttgcggcagc cggtgatcgt
     8401 cacagcgccg tcgcatcgct cgggcgagtg gcctggctcg aactctggga gcgcgccgtt
     8461 gcggccgctg cacagcggtt ggccgacgcg gtgaacgccc gcctgagagc ggcgggtacc
     8521 gagtcccggc tgcctgccgg caagctcgct cgtgtcctcc tgacggccga ggatgtgcgg
     8581 gcgatcgcgt cacgtctcgg gagcggcggc gcgacctttg tgagcgccct cgacgcgctg
     8641 gagcagacgg tcccggccgc ggctgcgtcg ggcacccgcg gacggctggg ccaggacgag
     8701 tggcagaggg cgctggccgc gacggcccgc cggctcgagt cgtcctggat ggccctgatc
     8761 gttgccgcga agcgggagca ggagcgctgg aaagcggaga tcgcgcgggt cagggcctgg
     8821 catcgcccac gctggccact ctggctgatc acagtcgtgg tgctcgccat cgcgacatat
     8881 ctgggattgg tcctcggtgg atatctaccc gtgccggccc cgctgcgcgg cttcgccgag
     8941 ttctggtggt cacggccgtg actgtgatcg gcgtggggat cgacctggtg gatctcgagc
     9001 gcatccggct cctgctggcc agcaaaggcg agcaggcgat gacccgtttc ttctccccac
     9061 acgagcgcga gtacctcgcc actcgacccg acgcgacggg tcacgcggcg gctcgcatcg
     9121 cggccaagga agcggtctac aaggcgatgc agatcttgcc caacgcgagg ggcatcggct
     9181 ggcgggagat cgaagtgtcc cgggaccagg agggcaggcc agcgatccgg ctgcacggtc
     9241 tggcggcgcg agtctccgag gagtccggcg gccttcggat ccagatctcg ctcacccact
     9301 cggctttatc ggccggagcg atcgcggtcg tggaagctcc gtagccgccg actcttccaa
     9361 ttccgacagg tttattctag tttgatccgg tcggctctca aaccgggtga aaatgattct
     9421 catcggcggc gcagtccttc ttcttggagc ttccctcctc agcccgcctc agcaggccag
     9481 ccagtcacag gatccggccc cggtcgtgcg tcggctggcg gccacggcgc agctggccgc
     9541 acaggagtac cgcatcggcg tggagaacgg ccgcatcatc gccgcggccg aagtcgacga
     9601 agcgcgactt tttctccagg agtctcgccg ctccgctgcc ctgcttcccc gtgacatcag
     9661 tcccattgcg ctggcgcaga tcgattcgct gattcactcg gtggatcggg tggcgccggc
     9721 ggattcgatc gacgaaaggg tacggcgtct gaccggctcg ctttcgcggc gactcaacgt
     9781 cgtcctggac gagatcccca atcaggagcc gtcgctcgct cgtggctcgg tggtctacca
     9841 gcagaattgc gccagttgcc acggcaccat gggcaccggc gacggtcccc ttgcaaaggg
     9901 gctcgagccc ccgcccgcca atctcaccga tcgctctgtc ctcctgaacc aatcgccact
     9961 cgactattac cggcggatca ccatcggagt ggtgggtacg gcgatgccgg ccttcgaaac
    10021 ccggctggct cccgaggatc gctgggccgc tgcggtatat gccacactgc ttcgactgcc
    10081 tccccatgcc ggtaacgtgc cggccgctct ccagtccttc ccgacgacgg ggcggatgtc
    10141 ggatacggag ttgctggcgg cgctcggtga gcgggatacc tccgccggcg cgcttgcgcg
    10201 agtcgccgcg gtacgagcct tccagcccga tgccaccgcc gacgtgaatg cacaggtgtt
    10261 ctctcaggtc agggtccagc tggactcgac gtacgccctg gcccggaggg gtgatacctc
    10321 ggcgagcacg cacgccttcg acgcctacat gacgttcgag caggtggaaa ggggggtccg
    10381 ggcaaggaac ccggggctcg ccgccgagct cgagtccgca tttgcggctc ttcggacccg
    10441 cgcggccggg ggtgccacgg cgacggagct tgctgcgatc cgacggcaac tcgacgccgg
    10501 gcttgagaac gcggagcgga ctctgggtga tgctctttcg cccacaaacc tctttctcca
    10561 gtcgttcgtc atcctcctgc gtgagggcct cgaggcgatc ctgatcgtcg gcgccctcat
    10621 gacatttctg gccaagatgg gagccggtca ccggaagcgc gatatccata tcggcgtcgg
    10681 cgcggccgtg ggtgtcagcg ttctcaccgc gctcgcactg gagacagtct ttcagatcac
    10741 ccctgccaag cgcgaagccc tggagggggc aacgatggtg gtggccacgg tggtcctctt
    10801 ctacgtgagc tactggttgc tgtcgaagat ggaagtggcc aagtggaacc acttcgtgaa
    10861 gagcaaggtg gaggatgcgc tgaccagcgg ctccggcctg gccctcgcca ccgccgcctt
    10921 tctggcggtc taccgtgagg gcttcgagac ggtgctgttc tacaaagcgc tctttctgac
    10981 cggaggacag ggcggcggga cgatgcccat cctgggcggt attctggtgg gctcggtcgt
    11041 catggtcggc gtctacgttg ccatcaatcg gttcggcctg cggcttccgc tcaaaccgtt
    11101 cttcggggtg accagcgcgt ttctgtacta catggctttc gtatttgccg gaaagggtgt
    11161 ggccgagctc caggaagggg gtttcattcc cactaccatt cttgccggcg ccccgcggct
    11221 gccggcgctt ggcatctacc caaccgtgga gtccctcctg gtccaggctg tcctgatcgt
    11281 tcttctcctg gtggctctgg tgtggacctt cgtcctcgct ccgcgccggc tcagctctgc
    11341 gccgctcttt ccagaggcac gccagagaaa gccggcgccg acatcgatcc cgacgccggt
    11401 tccccaggaa gccagtctcg agctactccg ctcgttggaa cggatggaag cggatcttgg
    11461 agagatgcgt gccgaagtcg aacgaatgaa gacgaagctg accgaagcgc cggagtcccg
    11521 agcccggaag cattaggtgg agttcaccac cgcggacctt tgtgacgcgt tcccggacct
    11581 ggtgcaggtc gcccagccgc tgtttcgcga atacggtgga ctcgagaagt ttgccgggcc
    11641 gatcgagact ctgcaggtgc acgacgacaa cacgcttgtc cgtgagacgc tggagacgcc
    11701 ggggcggggc agggtactgg tcgtggacgg tggcggctcg ctaaag
//
LOCUS       DASYRV010000072         3609 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2506919, whole genome shotgun sequence.
ACCESSION   DASYRV010000072 DASYRV010000000
VERSION     DASYRV010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3609
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2506919"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..194
                     /locus_tag="VGQ24_01620"
     CDS             <1..194
                     /locus_tag="VGQ24_01620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453557.1"
                     /translation="RTRLSSNDDDSSLDDPRGDIAGSPDGQPIAEPATLKFELQGVRR
                     LRLGISQPIGQKPSGASGY"
     gene            250..1089
                     /locus_tag="VGQ24_01625"
     CDS             250..1089
                     /locus_tag="VGQ24_01625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453558.1"
                     /translation="MSRLRILPCLVAALVTLSLVQSAEAQLGGLIKKAAKQNIPAAQS
                     AGQPKFDNVILELTPARVAKLIAGKRAGQQLANVPGGLVAFRTQLSTLEERQSKIYET
                     EVEKINAWDEKRRAAENCRDSVLIALKEKKSNWSDPQVMQKMQQLAMAIATAQAKGDT
                     AEARRLAEQVQQLSAPSPSDSADARRGCPVPAPTGLVKQYLDLQTQIESLREQIAKLE
                     QAVRLAEQTNSGMDERQVAMACERARMYIQNMWNKQNQTGFTATELAALNQAIKDLDP
                     LCP"
     gene            1080..1976
                     /locus_tag="VGQ24_01630"
     CDS             1080..1976
                     /locus_tag="VGQ24_01630"
                     /inference="COORDINATES: protein motif:HMM:NF021507.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiester glycosidase family protein"
                     /protein_id="HEV8453559.1"
                     /translation="MSLSIAPALLALLRAPESFLAVWTGTHWKEWWCSSSAPAVWTGP
                     LPALATGLAWRRIAPGVEWSELRLAGSGEAARIRVIVARIDPAMVRFRLDTAFSQKGT
                     RPLWSIARSPRDALVAINAGQFPRTHPWGWVVLGGRQYQPPGVGPLSVGIAFDSSGAL
                     RWIAADSLRSRRATTGTAEGFQSYPRLLVDGAVPAAIRSEGQGVDLTHRDARAALGQT
                     ADGKVLLVLTRFDGAGGVLDFLPFGVTVPEMAAIMGALGARNAVMLDGGISSQLLIRD
                     QNGHHRWRGLRAVPLGLVITRR"
     gene            complement(1992..2570)
                     /gene="dcd"
                     /locus_tag="VGQ24_01635"
     CDS             complement(1992..2570)
                     /gene="dcd"
                     /locus_tag="VGQ24_01635"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010543264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HEV8453560.1"
                     /translation="MSIKSDRWIRQMARERQMIEPFTDGQVREVDAQGRRVISYGVSS
                     YGYDMRVAPEFKIFTNALSVIVDPKEFDAKSFVEFEGEVCVVPPNSFALARSVEYFRI
                     PRNVLTICVGKSTYARCGIITNVTPFEPEWEGHVTLEISNTTPLPAKIYANEGICQVL
                     FFEADADDVCETSYADKKGKYQAQRGVTLPRL"
     gene            2778..3143
                     /gene="ndhC"
                     /locus_tag="VGQ24_01640"
     CDS             2778..3143
                     /gene="ndhC"
                     /locus_tag="VGQ24_01640"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEV8453561.1"
                     /translation="MLQPYVPLLLLIAFVVANAVLMLGLSHVLSSYRRTPTKVAPYES
                     GVPVLGDARERFSIKFYLVAMLFIIFDIETVFMIPWAVAFRQLNELGGLLIVEMFIFI
                     LVLGVGYIYIWKRGALEWD"
     gene            3134..>3609
                     /gene="nuoB"
                     /locus_tag="VGQ24_01645"
     CDS             3134..>3609
                     /gene="nuoB"
                     /locus_tag="VGQ24_01645"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HEV8453562.1"
                     /translation="MGLIETADSPPGARESAEVAGVSPNFITTKLDFLANWARSNSLW
                     PMPFGTACCAIEFMATAASRFDISRFGMERMSFSPRQADVLICAGRLPFKLSPIIRRV
                     WDQMPQPKWSISMGACASTGGIFDTYTMVQGIDTIIPVDVYVPGCPPRPEGLMYGI"
BASE COUNT          639 a         1137 c         1144 g          689 t
ORIGIN      
        1 gacgaactcg tttgtcctcc aatgacgatg attcctcatt ggacgatccc agaggcgaca
       61 tcgcgggatc accggacggc caaccgatcg cagagcccgc caccctcaag tttgagctcc
      121 aaggagtgcg ccggctccgt ctgggtattt cccagccgat cggccagaaa ccgagtgggg
      181 cctccgggta ctgagggtta ctccatgagc cgcgtagcac agcaacttcc tcattaccct
      241 ggaccgacca tgagccgact cagaatcctt ccgtgtctcg tcgccgccct ggtgacgctg
      301 agcttggtcc agagcgccga ggcccagttg ggcggcctca tcaaaaaggc ggccaagcag
      361 aatatcccgg cggcacagtc ggccggccag ccgaagttcg ataacgtcat tctcgagctg
      421 acacccgccc gcgttgccaa gctgatcgcc gggaaacgcg ccgggcagca actggccaac
      481 gtgcctggcg gtcttgtcgc gttccgtacc cagctcagca cgctggagga gcgccaaagc
      541 aagatctacg aaaccgaggt cgagaagatc aacgcatggg atgaaaagcg gagagcagcg
      601 gagaattgcc gggattccgt cttgatcgcc ctcaaagaga agaaatccaa ttggagcgac
      661 cctcaggtca tgcagaagat gcagcagctc gccatggcta tcgccacggc gcaagccaag
      721 ggcgacaccg ctgaagcccg tcgattggcc gagcaggttc agcagctcag tgcaccgagc
      781 ccttccgatt cggccgacgc tcggcggggc tgccccgtgc cggctcccac gggcctggtc
      841 aagcagtatc tcgatctcca aacccagatt gagtcgctcc gggagcagat cgcgaagctc
      901 gaacaggcag tgcggctcgc ggagcagacc aacagcggca tggacgagcg tcaggttgcg
      961 atggcgtgtg aacgggcccg gatgtacatc cagaacatgt ggaacaaaca gaatcagacc
     1021 gggttcaccg cgacagagct cgcggcgctg aaccaggcga tcaaggatct ggacccgctg
     1081 tgtccctgag tatcgctcca gcgctgctcg cgctgctccg cgcgccggag tccttcctcg
     1141 cggtctggac cgggacgcac tggaaggagt ggtggtgctc ctcctccgcg ccggcggttt
     1201 ggaccggtcc gcttccagcg ctcgccaccg gtctggcctg gcggcgcatc gcccctggcg
     1261 tcgagtggag cgagctgcgg ctggcgggct ccggtgaggc ggctcggatc cgggtgatcg
     1321 tcgctcggat cgatccagcg atggttcgct tccggctcga tactgcgttt agtcagaagg
     1381 gcacccggcc cttgtggtcc atcgcgcgct ccccgcgcga tgcgctggtg gcgatcaatg
     1441 ccggccagtt cccccgaacc cacccctggg gatgggtggt gctgggtggg aggcaatacc
     1501 agccgcccgg ggttggtccg ctgtccgtag gaatcgcatt cgactcgagc ggcgcgctgc
     1561 gctggattgc cgcggattcc ctgcggagtc ggcgcgccac gacgggcacc gcggaaggat
     1621 tccaatccta tccgcggctc ttggtagatg gcgcggtgcc cgcggcgatc agatcggaag
     1681 gccagggagt ggatctaacc catcgcgacg ctcgcgccgc gctcggacaa acagcagatg
     1741 ggaaggtgtt gctggtgctc accaggttcg atggggcggg aggcgtgctg gattttttgc
     1801 cattcggcgt gacggttccg gagatggcgg cgatcatggg agcgctcggc gcccggaacg
     1861 ccgtcatgct cgatggcgga atctcgagtc aattgctgat tcgggaccag aacggccacc
     1921 accgctggcg aggccttcgt gcggttccgc tgggactcgt gatcaccagg cggtagacga
     1981 ctggtgatgc ctcacagcct tggtaaggtc accccccgct gcgcctggta cttgcccttc
     2041 ttgtcggcat agctggtctc gcagacgtcg tcggcatccg cctcgaagaa caggacctga
     2101 cagatcccct cgttggcgta gatcttggcg ggcaggggag tggtgttgct gatctccagg
     2161 gtgacgtggc cctcccactc cggttcgaag ggggtgacat ttgtaattat tccacatcga
     2221 gcataagtcg atttcccgac gcagatagtt aaaacgttgc ggggtatgcg gaaatactcg
     2281 actgatctgg ccagggcgaa gctgttcggc ggcaccacgc agacctctcc ttcgaactcc
     2341 acgaagctct tcgcgtcgaa ctccttgggg tccacgatca ccgaaagggc gttggtgaag
     2401 atcttgaact cgggcgccac ccgcatgtcg tagccgtagg agctcacccc ataggaaatg
     2461 acccggcggc cttgggcatc gacctcgcgc acctggccgt cggtgaacgg ctcgatcatc
     2521 tgccgctcgc gggccatttg gcggatccag cggtcacttt ttatagacat gggggcgctg
     2581 agaggcttgg tggctgggaa gctaggaggc taggggtgga ggggaagggc ctagcctcct
     2641 agcctcctaa actcctagct tcctaaatct aatctctacc gaaagttgtc cccttgcacc
     2701 gagttgaact agccccgggc tcgggttaca atacccccgt ctggactggc ggccccgctt
     2761 aacctcacac cgtcgagatg ctccagccct acgtcccgct cctcctgctc atcgcgttcg
     2821 tcgtggcgaa cgccgtgctc atgctcggcc tctcccacgt gttgtcgtcc tatcggcgta
     2881 ccccgaccaa ggttgcgccc tatgagtcgg gcgtgccggt cctgggggac gcccgcgaac
     2941 gcttctccat caagttctac ctggtcgcga tgctcttcat catcttcgac atcgagaccg
     3001 tgttcatgat tccctgggcc gtggcgttcc ggcagctgaa tgagctgggc ggtctcttga
     3061 tcgtcgagat gttcatcttc attctcgtcc tcggcgtcgg ctacatctat atatggaagc
     3121 ggggggcgct cgaatgggac tgatcgaaac cgcggatagc ccgcccggcg cgcgggagtc
     3181 ggccgaggtt gccggcgtct cgcccaattt catcaccacg aagctcgatt tcctggcgaa
     3241 ttgggctcgc tccaactcgc tctggccgat gcccttcggc accgcctgct gcgccatcga
     3301 attcatggcg accgcggcca gccggttcga tatctcgcgc ttcggcatgg agcggatgag
     3361 cttctcgccg cgccaggcgg acgtgctgat ctgcgcgggc cggctgccct tcaagctctc
     3421 acccatcatc aggcgggtgt gggaccagat gccgcagccc aaatggtcca tcagcatggg
     3481 ggcctgcgcc tccacgggtg ggatcttcga tacctacacg atggtgcagg gcatcgacac
     3541 gatcattccg gtggacgtgt acgtcccggg ctgcccgccg aggccggaag gcctgatgta
     3601 cgggatcat
//
LOCUS       DASYRV010000073         3889 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3974095, whole genome shotgun sequence.
ACCESSION   DASYRV010000073 DASYRV010000000
VERSION     DASYRV010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3889)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3889)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3889
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3974095"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..565)
                     /locus_tag="VGQ24_01650"
     CDS             complement(<1..565)
                     /locus_tag="VGQ24_01650"
                     /inference="COORDINATES: protein motif:HMM:NF019352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEV8453563.1"
                     /translation="MREQSMTRRQILKVGALGTASLAAGASVLSLPGLAQGDAKAGKG
                     QASHHDMMTVGQLAPGSFDPTAFLTHFDTGNVSRLASGQVLREYELVADEREIEVAPG
                     VFYPAWTYNGQVPGPTIRCTEGDRLRVHFTNRGSHSHSIHFHGVHPSNMDGAFEPVHP
                     GRSYVYEFDVEPFGLHLYHCHTVPIKRH"
     gene            complement(597..1952)
                     /locus_tag="VGQ24_01655"
     CDS             complement(597..1952)
                     /locus_tag="VGQ24_01655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HEV8453564.1"
                     /translation="MSAVSARPVSDLAAWRFPRTLPSLPESFQTIHVPGGVSFWRKAL
                     AFAGPGYMVAVGYMDPGNWATDLAGGARFGYTLLSVILLSNLMAILLQALALKLGIAT
                     GRDLAQACRDHYTRPVSFVLWVLCEIAIAACDLAEVIGSAIALNLLFGIPLIWGVCLT
                     ALDVLLILLLQNKGFRYLEAFVIALVATIGVCFAAELLMAHPDITQIVGGLVPTTQIV
                     TNPAMLYIAIGILGATVMPHNLYLHSSIVQTRKVLPDSKSKREAIRFATLDSTVALLF
                     AFFINASILILAAATFHNTGNQEVADIGDAYRLLTPLLGTTLASTLFAVALLASGQNS
                     TITGTLAGQIVMEGFLNIRLPAWLRRLITRLIAIIPAVIVTAIYGEHGAGSLLILSQV
                     ILSLQLSFAVVPLVYFTSQRRKMGEFVNRRPLATVAWVVAVAIIGLNAWLLIGTFRLW
                     L"
     gene            complement(1949..2659)
                     /locus_tag="VGQ24_01660"
     CDS             complement(1949..2659)
                     /locus_tag="VGQ24_01660"
                     /inference="COORDINATES: protein motif:HMM:NF014762.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HEV8453565.1"
                     /translation="MTLKLRTNMSAAIQSETLTRSVEDYLKAIYQLSPEGRPASTSEI
                     AHLLALSAPSVTGMVKRLSEHGLLEHIPYRGVQLTEEGRRAALRMVRRHRLIEAYLVE
                     FLGYSWDTVHAEAERLEHAVSDTMIERMAAALGNPTVDPHGDPIPAPDGSIHELAGSA
                     LTEIPVGETVEIHRVHESQPERLRYIASLGLRPGVRVTVVDRQPFDDLVTIEVGGLRH
                     VIGRELGHVLQCSSAEGA"
     gene            complement(2851..3435)
                     /locus_tag="VGQ24_01665"
     CDS             complement(2851..3435)
                     /locus_tag="VGQ24_01665"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005777 - peroxisome [Evidence IEA];
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003986 - acetyl-CoA hydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0008413 - 8-oxo-7,8-dihydroguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0009132 - nucleoside diphosphate metabolic
                     process [Evidence IEA];
                     GO_process: GO:0015938 - coenzyme A catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HEV8453566.1"
                     /translation="MPIALALTTRLVRLRERLAGHQPSTDDDASLLWAAVAVILTPEP
                     DGILLIRRAERTGDPWGGHMALPGGRREPTDQDLFTTAIRETEEEVGIRLDREHLAGT
                     LDDVVPRTPVLPPVAVRPFVFLAPVRPVLTLNAEVAAADWVTIDHLIHPGTHHPVWLE
                     VAGDTRVVQAYELENAIVWGMTERIITSLLQQLN"
     gene            complement(3672..>3889)
                     /locus_tag="VGQ24_01670"
     CDS             complement(3672..>3889)
                     /locus_tag="VGQ24_01670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453567.1"
                     /translation="PRGSGVNSTFGASPEEGAETSIYLAASPDVEGVTGKYFVGKKPA
                     ASSRESYDEAAARRLWEVSERLTGLST"
BASE COUNT          731 a         1191 c         1317 g          650 t
ORIGIN      
        1 tgtgtcgttt gatgggcacg gtgtggcagt gatacagatg caggccgaac ggctccacat
       61 cgaactcgta gacgtagctc cggccggggt gtaccggctc gaaggcgccg tccatgttgg
      121 acgggtggac gccatggaag tgaatgctgt gggagtggct gccgcgattg gtgaaatgca
      181 cccggagccg gtcgccctcg gtgcaacgga tcgtcggacc ggggacctgg ccattgtagg
      241 tccatgctgg atagaacacc cccggggcca cctcgatctc gcgctcgtcg gcgaccagct
      301 cgtattctct caacacctgg cctgacgcca ggcgggagac gtttccggta tcgaagtggg
      361 tcaggaacgc ggtgggatcg aaggagccgg gggcgagctg cccaacggtc atcatgtcat
      421 gatgtgaggc ctgcccttta ccggccttgg catcgccctg agccaggcca gggagcgaca
      481 ggacgctggc accagccgcg agactggcgg tacccagcgc accaaccttc aggatctgcc
      541 ttcgcgtcat cgactgctcg cgcatatggt ctcctaccgc cagtccgggg gacttgctac
      601 agccagagtc taaaagtgcc gatcaggagc catgcgttca ggccgatgat cgccaccgca
      661 actacccacg ctacggtcgc cagcggccgg cggttcacga actcgcccat cttccgtcgc
      721 tggctggtga agtacaccag cggtaccact gcaaaagaga gctgcaggct caggatgacc
      781 tggctcagga tcagcaggga gccggcccca tgctctccgt atatggcagt cacgatcacc
      841 gcgggtatga tcgcgatcag ccgggtgatg agccgccgca gccaggccgg cagccggata
      901 ttaaggaagc cctccatcac gatctgaccg gccagcgtcc ccgtaatggt cgaattctga
      961 cccgaggcga gcagcgccac cgcgaacagg gtgctggcca gtgtggtgcc gagcagagga
     1021 gtcagcagcc ggtaggcatc accgatgtcg gcaacctcct ggttcccggt gttgtggaag
     1081 gtggctgcgg caagaatcag gatcgacgcg ttgatgaaga aggcaaagag caacgcaact
     1141 gtcgaatcga gcgtcgcgaa gcggatggcc tcgcgcttcg acttgctgtc gggcagcacc
     1201 ttccgggtct gcacgatgga ggagtgcaga tagaggttgt ggggcatcac ggtggcaccg
     1261 aggatgccga tggcgatgta gagcatcgcc ggattggtca cgatctgagt ggtgggcacc
     1321 aggccgccca cgatctgggt gatatcgggg tgtgccatga ggagctccgc cgcaaagcat
     1381 acgccgattg tcgcaaccag cgcgatgacg aaggcctcga gatagcggaa gcccttgttc
     1441 tgcagcagga gaatcagcag cacgtcgagc gcggtgagac acacgcccca tatcagcgga
     1501 attccgaaca ggagattcaa ggcaatggcc gagccgatca cctcggccag gtcgcaggcc
     1561 gcgatagcga tctcgcacag cacccaaagc acgaagctga cggggcgcgt atagtggtcg
     1621 cggcacgcct gagcgagatc tctgccggtg gcaatgccca gcttgagcgc gagcgcctgg
     1681 agcagaatcg ccatcaggtt cgagagcaga atcacgctga gcagggtgta gccgaaccgt
     1741 gcgccaccgg cgaggtcggt ggcccagttg cccgggtcca tgtacccgac agccaccatg
     1801 taaccggggc cggcgaaggc gagcgcctta cgccagaacg acaccccccc gggtacgtgg
     1861 atggtctgga aggactcggg gaggctcgga agcgtgcgag ggaaccgcca cgccgcgaga
     1921 tcgctgaccg gacgagccga gactgcgctc atgcgccttc cgccgacgag cactgaagca
     1981 cgtggccgag ctctcggcca atgacatgcc gcagacctcc gacctcgatg gttaccagat
     2041 cgtcgaacgg ctggcgatcg accaccgtaa cccgcactcc aggtctcagc cccagcgaag
     2101 cgatgtagcg gagccgttcc ggctgactct catggactct atggatctcc acggtctcgc
     2161 cgacggggat ctcagtcagg gcgcttccgg ctagctcgtg aatggagcca tcaggggcgg
     2221 ggatcggatc gccatgggga tcgacggttg ggttgccgag ggctgccgcc atccgctcga
     2281 tcatggtgtc agataccgcg tgctccaggc gttccgcctc ggcatgcacg gtatcccagg
     2341 agtagcccag gaactcgacc aagtaggcct cgatcagacg gtggcgccgg accattctca
     2401 gggcggcgcg gcgtccctcc tcggtgagtt gcaccccgcg atacgggatg tgctctagca
     2461 acccgtgctc tgacagccgc ttgaccatcc cagtgaccga gggggcggag agcgcaagca
     2521 aatgagcgat ctcgctggtc gaagcggggc ggccctcggg ggagagctgg tagatcgctt
     2581 tgaggtaatc ttcgaccgac cgggtcaatg tctcggactg gatggctgcg ctcatgttgg
     2641 tccggagttt tagggtcacc taagactgta ggtaagagcc tcctaatgtc aagctggtgg
     2701 gctgccaaaa agtgcacctt gcgcccagcc tcagagttca gtccaggccg ctggctctgg
     2761 gtggggcctg ctggagagcc cacgcccgcg ccggctctcc ggccgctcgg ttggggacaa
     2821 cgctccaggt tgattagagg gtcaggtggg ctagttgagc tgctggagaa ggctggtaat
     2881 gatccgctcg gtcatgcccc agacgatggc attctcgagc tcgtaggctt ggaccacgcg
     2941 ggtatcgccg gctacctcca gccagaccgg atggtgagta ccaggatgga tgagatggtc
     3001 gatcgtgacc caatcggcgg cggccacctc ggcgttgagt gtcaacaccg gccggaccgg
     3061 ggcgagaaac acgaagggcc tgacggctac gggggggagg acgggcgttc gtggcaccac
     3121 gtcatcgagg gttccagcca gatgctcgcg atccagccgg atcccgactt cttcctcggt
     3181 ctcgcggatc gcggtcgtga agagatcctg gtcggtcggc tcgcggcggc cgcccggcag
     3241 agccatgtgg ccgccccagg gatcgccggt gcgctcggcc cgccggatca gaaggatgcc
     3301 atcgggttcg ggagtgagga tgacggcgac cgcggcccac aacagcgatg cgtcgtcgtc
     3361 tgtgctgggt tggtggccgg ctagacgctc gcgaaggcga accagccggg tggtcagtgc
     3421 gagtgcgatt ggcaaccacc tccacagcag cccccgccgg tgggcggacc gagccggctg
     3481 tagtcggcct gcttgccagc ggaggccggc cgcgccggca gagacataag ccgctggaga
     3541 ctcgagcccg agcattgggg gcaggtcacc tgctgcatac cccggacgag ctgctcaaat
     3601 tcggcgccgc acccggcgca gcggtaatcg taaatgggca tgaaagagct tcgccgatgc
     3661 cccgcctgcg gtcaagtgga gaggccggtc aggcgctcgc tgacctccca caatcgtcgc
     3721 gccgccgcct catcgtagga ctcgcgcgac gaagcggccg gtttcttccc cacgaagtat
     3781 ttccccgtta ctccctctac atcgggcgag gcggcgaggt agatgctcgt ctccgcgccc
     3841 tcttccggac tggcaccgaa ggtgctgttg acccctgatc ctcggggag
//
LOCUS       DASYRV010000074         1653 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1273760, whole genome shotgun sequence.
ACCESSION   DASYRV010000074 DASYRV010000000
VERSION     DASYRV010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1273760"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..865)
                     /locus_tag="VGQ24_01675"
     CDS             complement(<1..865)
                     /locus_tag="VGQ24_01675"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEV8453568.1"
                     /translation="MKWSYRIGQIAGTDIKVHVTFLLLVGLWAVRGYEEGGPGAALAG
                     AFALLALFACVLLHEFGHILMARHFGVRTPDVILLPIGGVARLERIPEEPRQELLIAL
                     AGPAVTLAIVVALYLVLMLAGSHVTLGRLSPEGPFLGQLMVINVYLLLFNLVPAFPMD
                     GGRVLRALLSSRLGLVRGTRIAASLGQMLAIAGGVYGFVADQPFLILIAFFVFLGANA
                     EAAAVETRVAGQGLNVAQMMVTDFRTVPVHATLSQAVELLLSGEQREFPVVDNLGHTE
                     GILTRDNLIRGL"
     gene            complement(1025..>1653)
                     /locus_tag="VGQ24_01680"
     CDS             complement(1025..>1653)
                     /locus_tag="VGQ24_01680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453569.1"
                     /translation="PTRLRLQLAFARALEALADTYQFEAAEFVRRLRSRLSVDEALER
                     YFREVGVPATIEETVRSRALISLAGLIENTPRPERQPPSWAILRPLEALRRRMQHVEA
                     TNLDCRLAASMSDEAVAATHVRSALETAEVLAGEVTPDEAIMHYVRAFDLPALDGQVI
                     YRKAMAQWAELHPLPGEAQALVRGLAAATSRPRLELRGRSEFGLKVMV"
BASE COUNT          303 a          586 c          518 g          246 t
ORIGIN      
        1 agagaccacg gatcaggttg tcgcgggtga gaatcccctc cgtgtgacca agattgtcca
       61 ccaccggaaa ttcacgttgc tctccgctca gcaggagctc caccgcctgc gagagtgtcg
      121 cgtgcaccgg cacggtgcgg aagtcggtca ccatcatctg tgctacgttg agaccttggc
      181 ccgcgacgcg ggtctcgacc gccgccgcct ccgcattggc accgaggaac acgaagaagg
      241 cgatcaagat cagaaatggt tggtcggcaa cgaagccata caccccgccg gcgatcgcaa
      301 gcatctggcc caggctggcg gcgattctcg tgcctcgaac caggcccaag cggctggaga
      361 gtagggcgcg cagcacccgg cccccatcca tggggaaggc cggcacgagg ttgaacagaa
      421 gcagatagac gttgatcacc atgagctggc cgagaaatgg cccctcgggg ctcagccggc
      481 ccagcgtcac gtggctgccg gcgagcatga gcaccaggta gagcgccacg acgatggcca
      541 gcgtcactgc cgggccggcc agcgcgatca ggagctcctg ccggggctct tcgggaatcc
      601 tctccagccg ggccacacca ccgatcggca gcaggatgac gtccggcgtg cgcaccccga
      661 agtggcgcgc catgagaatg tgcccgaact cgtggagcag gacacacgcg aaaagggcga
      721 gcagggcgaa agcgcctgcc agcgccgcac ccggcccgcc ctcttcgtag ccccgcaccg
      781 cccacagccc caccagcaac aggaaggtga cgtgcacctt gatgtcggtg cctgcgatct
      841 gtccgatccg atatgaccat ttcatcgccg cgccctcgtt cggtccgccc gggcgaaaca
      901 taacgggggg atggcgctgc cggtcaccag ttccagtcgc cggtcaccag tcgcgagtcg
      961 gtcgccagtc tccagtcacc gcttactgct taccgctcac ctctcacctc tcacccctca
     1021 cccctcacac catcaccttc aacccgaatt ccgaacggcc gcgcagctcg agccgaggac
     1081 ggctggtggc cgctgcgagt ccacggacaa gtgcctgggc ctcgcccggc agcggatgca
     1141 gctcggccca ctgcgccatc gcctttcggt agatgacttg cccatccaga gccggcaggt
     1201 cgaacgcgcg aacgtagtgc atgatcgctt cgtcgggcgt cacctcgccg gccagcacct
     1261 cagccgtctc gagcgcgctg cggacgtgcg tggctgccac cgcctcatcc gacatggacg
     1321 cggccagccg gcaatccagg ttggtggcct ccacatgctg catccggcgc cggagcgcct
     1381 ccagcggtcg cagaatggcc cacgagggtg gctgccgctc cgggcgcggc gtgttctcga
     1441 tcaatccggc cagggagatc agcgcgcgac tgcgaacggt ctcttcgata gtggccggga
     1501 cgcccacctc gcggaagtac cgctcgagcg cctcgtccac gctgagccgc gacctcaacc
     1561 gccgcacgaa ctcggcggcc tcaaactgat aggtatcggc cagtgcttcg agcgctctgg
     1621 caaaggccag ctggagacgg agccgggttg gcg
//
LOCUS       DASYRV010000075         4843 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1053352, whole genome shotgun sequence.
ACCESSION   DASYRV010000075 DASYRV010000000
VERSION     DASYRV010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4843
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1053352"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..742
                     /locus_tag="VGQ24_01685"
     CDS             <1..742
                     /locus_tag="VGQ24_01685"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="asparagine synthase-related protein"
                     /protein_id="HEV8453570.1"
                     /translation="THKLRWVDLMARKTGGERYSESLQFFWFNEAHRAELYAPGFRQQ
                     LLGSRPDACLLDLYAAPNAEEPVDRMMYVDCMSRLPGQSLTILDRATMAYSLESRSPF
                     LDPRFAEFMARVPTSMKIKGRRLRHLERRLGERYLPPEVLARKKQGFASPLMYILEGE
                     VRALAPRLLANSELVRAGYLEGERVKQLVDEHLARRYDHCNRIWLLLSAEVWYRRYIA
                     GRSEADLETELADRMAEPEAVALARSAS"
     gene            739..1431
                     /locus_tag="VGQ24_01690"
     CDS             739..1431
                     /locus_tag="VGQ24_01690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453571.1"
                     /translation="MSSRVESVGSPVQTRSPGENTAAMLLLSSYDWERDRETIALGDA
                     IQRFRDVNGYVGLPIPAKPHFLKLFRKLINGSRPPEHIYLVHDASHVLTGTTFTHDEP
                     QLVLLAGEAAEQGLYFASRGVPKAIGWALFYGGAFVECARRIASFRQVGRGIRLGIFN
                     RAYDYARRTRLTNLFEIPVEELWSIPVAEARRRLRMPEAGMAAEFYRDITLDPAMAGA
                     IRAEWKSFGVKR"
     gene            complement(1465..1551)
                     /locus_tag="VGQ24_01695"
     tRNA            complement(1465..1551)
                     /locus_tag="VGQ24_01695"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1515..1517),aa:Ser,seq:tga)
     gene            2220..2414
                     /locus_tag="VGQ24_01700"
     CDS             2220..2414
                     /locus_tag="VGQ24_01700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453572.1"
                     /translation="MRSAPWDRRGGAGKRVLRGGHTVTLATGLKAPADLVVDRRRGWL
                     IVPENDANRLIVYHGDIAAR"
     gene            complement(2524..3153)
                     /locus_tag="VGQ24_01705"
     CDS             complement(2524..3153)
                     /locus_tag="VGQ24_01705"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HEV8453573.1"
                     /translation="MKIEGARLAAVSAGLMLLLAATACQGRTENAGRDQSAAASAATP
                     PDTGGAAPAATPKGGLGDSNIVALLDEANMADSAAGAVALKKATNPDVKAFAKLMMAD
                     HHALRVQGQALAKQLAVTPKLPERDPLAGYIRNETDALKKTPKGAEFDRTYIDHEVSV
                     HQAVLDFANQARVTTQTPELKDLIGKAVPVIQKHLDQAQEIQKKLGSTA"
     gene            complement(3236..3961)
                     /locus_tag="VGQ24_01710"
     CDS             complement(3236..3961)
                     /locus_tag="VGQ24_01710"
                     /inference="COORDINATES: protein motif:HMM:NF012455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MIP family channel protein"
                     /protein_id="HEV8453574.1"
                     /translation="MTTRSSWLRRTVAEAIGTFFLVLIGPGSVMVDARTHGAVGHAGI
                     GLAFAFVVIAMIYALGHLSGAHINPAVTIAFWSVRHFPTKEVLPYIAAQCTGAVAASL
                     FLRMTLGPIGNMGATLPALPLAAALAIEWVLSFGLMFVIMAVATDERVAEGFAPIAVG
                     LTVGFCALMAGPLTGASMNPARSFGPALVGESWRAHWIYWLAPVTGMIASAWCYNAIR
                     QTEPPPVSAPLEALGVQGTLTQA"
     gene            complement(3958..4719)
                     /locus_tag="VGQ24_01715"
     CDS             complement(3958..4719)
                     /locus_tag="VGQ24_01715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HEV8453575.1"
                     /translation="MRYALISDIHANLPALEAVLADIDARKVGAIYHLGDLVGYAPWP
                     NEVVDLIRSRAIEGVAGNYDSTVGTNYKHCGCRYEDPRQEELSHISYGWTRQHVSPAT
                     RDWLAGLPFRIDLLPNGGHVAGPRLVLVHGTPTLNTLYWTEDRSDEFCLKMAGHAGLK
                     PGDLIAFGHTHLPWQRELSGIRFVNTGSVGRPKDGDRRAGYVLLDVKDGAGTAEFIRV
                     EYDVERAMRGIRESDLPDDFADHLRTGGKITAASR"
BASE COUNT          861 a         1576 c         1555 g          851 t
ORIGIN      
        1 gacccacaag ctcaggtggg tggacctcat ggcgagaaag acgggtggcg agcggtactc
       61 cgagagcctc cagttcttct ggttcaacga ggcgcaccgg gccgagctgt acgcgccggg
      121 attccggcag cagctgctgg gtagccggcc cgacgcctgc ctgctggatc tgtacgcggc
      181 tccaaatgcc gaagagccgg tcgaccggat gatgtacgtc gactgcatgt cgcggctgcc
      241 ggggcagtcg ctcaccatcc tcgatcgggc cacgatggcg tacagcctcg agtcccgctc
      301 gccgttcctg gacccgcgct tcgccgagtt catggccagg gtgcctacct cgatgaagat
      361 caagggtcgg aggctgcgac acctcgagcg cagactgggc gagcggtacc tgccgccgga
      421 ggttctcgct cggaagaagc agggtttcgc ctcgcctctg atgtacatcc tcgaggggga
      481 agtgcgtgcc ctcgcaccgc gtctcctggc gaacagcgag ctggtccgag cgggctatct
      541 cgagggagag cgggtaaagc agctggtgga cgagcatctg gctcgccggt acgatcactg
      601 caaccgcatc tggctcctgc tcagcgccga ggtgtggtac cggcggtata tcgcgggccg
      661 ctccgaggct gacctcgaga cggagctggc ggatcgcatg gcagagcctg aagcggtcgc
      721 gctggcccgg agcgcctcat gagctcgcgg gtcgagtcgg tcggcagtcc ggtgcagacc
      781 cggagcccgg gtgagaacac cgccgctatg ctgctgctct cctcctacga ttgggaacgc
      841 gaccgggaga cgatcgcgct gggcgacgcc atccagcggt tccgggacgt gaacggatat
      901 gtgggtctcc cgattcctgc caagccgcat ttcctcaagc tctttcgcaa gctgatcaac
      961 ggctcgcggc cgccggagca catctatctg gtacacgatg cgtcgcacgt gctcaccggg
     1021 accaccttta cccacgatga gccgcagctc gtgctgctgg ccggcgaggc ggcggagcag
     1081 gggctctact tcgcgtccag gggggtgccg aaggcgatcg gatgggcctt gttctacggc
     1141 ggagcgttcg tggagtgcgc ccggcgcatc gcctcgttcc gtcaggtggg gcggggtatc
     1201 cggctcggca tcttcaaccg ggcgtatgat tatgctcgcc gtacccggct gacgaatctg
     1261 ttcgagatcc cggtggagga gctgtggtcg atacccgtgg ccgaggctcg ccggcgtcta
     1321 cgtatgccgg aagcaggtat ggcggcggaa ttctaccggg acatcaccct ggatccggca
     1381 atggctgggg ccatccgggc ggagtggaag agcttcgggg tcaagcggta ggcagccaac
     1441 caaggtcgac acacctgatt tcagcggcgt gggtgagatt cgaactcacg gaacggtttc
     1501 ccgttcggcg gttttcaaga ccgctgcatt caaccactct gccaccacgc ccggagcctg
     1561 aaagctccta agaaccccgc cggcaggcaa gcgctacagc gatgcgccca cgccctccgc
     1621 gctcgagagt gtctactcac ccggaaatct ctaacctcag gccgaacggc ccggcgtaac
     1681 tcgcggtcgc gtccccggcg agcttgatcg cgaaggcctg gacttggttt gtgccggcct
     1741 caggtgcggt cgtaagggcc tgagctcgct tcgagacgtc ctcgatgcga tcgtgtgggc
     1801 gtgaaccgca tcacggcggc gcggggtcga atcgcgagaa tctgactccc aacggaacgg
     1861 cccaggctcc aaacgcgacg acccgcgctc catccgcaac ctcccaggtt cccaacggca
     1921 cggccaaggc tcctaacgcg agcacccacg ctccaaacgc aacctcctca ttcccaacgg
     1981 tacggcctca gctccaaacg tgacggcgtc agcaccaatc gcgacaaccc gcgctctgta
     2041 cgcaacgtcc taaactctaa acccgaccct ctgaactcca aacgcgacgg gccgagctcg
     2101 ccacggacgg cccgagatcc acacgcaacc gcctaagctc gcgatgcaac ggcccaagct
     2161 cccgacgcaa cggcccaagg tgcacgcgcg atgagttaag cggccaacgc agcctcttgg
     2221 tgcgatctgc accatgggat cggcgcggcg gagcagggaa gcgcgtttta cgtggcggcc
     2281 acaccgtcac ccttgcaacc ggactcaagg caccggctga tctggtggtg gaccgcaggc
     2341 ggggttggct catcgtgccg gagaacgatg ctaaccggct gatcgtgtac cacggtgaca
     2401 tcgccgcgcg ctgacgccta ctctcaatgg ggcttgatct tacgacgctc agctcaagtg
     2461 atacgcaaac tgggatggcg aggccggcca gcgcctgcca tcccagtccg gtgttggggt
     2521 ggactacgcg gttgagccga gtttcttctg gatctcctgt gcctggtcca ggtgtttctg
     2581 gatgaccgga accgccttcc cgatcaggtc cttcaactcc ggggtctggg tggtcaccct
     2641 ggcctgattg gcaaagtcga gtacggcctg gtggaccgac acctcgtggt cgatgtaagt
     2701 gcggtcgaac tcggcaccct tgggtgtctt ctttagcgca tccgtctcat tccggatata
     2761 gccggcgagc gggtcccgct cggggagctt cggcgtcacg gcaagctgct tggctagcgc
     2821 ctgtccctgg acccgcaggg cgtggtggtc agccatcatg agcttggcaa acgctttgac
     2881 atcggggttg gttgccttct tgagtgccac cgccccagcg gcgctgtcgg ccatattggc
     2941 ctcatcgagc aaggcgacaa tattcgaatc gccgagccca cccttgggag tagccgccgg
     3001 cgcggcacct ccggtatcgg gcggagtggc ggcgctcgcc gcggcgctct ggtcccgccc
     3061 tgcattctcc gtcctcccct ggcacgccgt cgccgcgagt agcagcatga gtcctgccga
     3121 taccgctgcg agccgtgctc cctcgatctt catacgccct ccctcgaatg gtcgaattgc
     3181 gtcccacgtt tctacaacct cgggagagcc gcagatgtga ccgtcgtcac cgtgttcagg
     3241 cctgggtgag ggtgccttga acacccaagg cttcgagtgg ggcggagact ggcggcggct
     3301 ccgtctgacg aatggcgtta taacaccagg cggatgcgat catgccggta acgggggcca
     3361 gccagtagat ccagtgggct cgccaggact ctcccaccaa cgcggggccg aacgatcgag
     3421 cggggttcat gctcgcaccg gtcagcggcc cagccatgag ggcgcagaag cctacagtca
     3481 gtccaaccgc gatgggggca aacccttccg cgacgcgctc gtcggtagcc acggccatga
     3541 tcacgaacat gaggccaaac gagagtaccc attcgatcgc gagcgccgca gccagcggca
     3601 atgcgggaag agtggccccc atgttgccga tcgggcccag cgtcatccgc aggaagagcg
     3661 aggcagccac ggcccccgtg cactgggccg cgatataggg gaggacctcc ttcgtcggga
     3721 agtgccgaac ggaccagaac gcaatggtaa cggccggatt gatgtgggca ccggacaggt
     3781 ggccgagcgc gtagatcatc gcgatcacca cgaatgcgaa cgccagccct atccccgcgt
     3841 gacccacggc tccgtgggta cgcgcgtcta ccatgacgct gccgggtccg atcaggacaa
     3901 ggaagaaggt tccgattgcc tccgccaccg tccggcggag ccaggagctt cgtgtcgtca
     3961 ccgggaagcc gcggtaatct ttccaccggt gcggaggtgg tccgcgaaat catccggcag
     4021 atcgctttcg cggatacccc gcatcgctcg ctcgacatca tactcgacgc gtatgaactc
     4081 cgccgtgccg gcgccgtctt tcacgtcgag cagcacgtac ccggctcgcc ggtcgccatc
     4141 cttggggcga cccacactac cggtgttgac gaaccgaatg ccgctcagct ctcgttgcca
     4201 gggaagatgg gtatgaccga atgcgatgag gtcccccggt ttgagaccag cgtggccggc
     4261 catcttgagg cagaactcat cggaccgatc ctcggtccag tagagtgtgt tgagagtcgg
     4321 agtgccatgg accagcacga gtcgcggccc ggcgacatga ccgccgttgg gcagcaggtc
     4381 gatgcggaag ggaagccccg cgagccagtc cctggtggcg ggggagacat gctggcgggt
     4441 ccacccatag ctgatgtggc tcagctcctc ctgtcgtgga tcctcataac ggcagccgca
     4501 gtgcttgtag ttggttccga cggtcgagtc gtagttcccg gccacacctt cgatggctcg
     4561 gctcctgatg agatccacca cctcgttggg ccacggcgcg tagcccacca ggtccccgag
     4621 gtgatagatc gccccgacct ttcgcgcgtc aatatccgcg agcactgctt ccaaggccgg
     4681 caggttggca tggatgtcgg agatcagggc atatctcacc ggaaatcact cgccatgggg
     4741 ttcactctcc cagcgacttt cgcatgacca cggctgacgc cgggcaggtc tccttgaact
     4801 cgatcgaacc ctgaacttcc ggggctaccg actcccggct gac
//
LOCUS       DASYRV010000076        10543 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2106650, whole genome shotgun sequence.
ACCESSION   DASYRV010000076 DASYRV010000000
VERSION     DASYRV010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10543
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2106650"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2091
                     /locus_tag="VGQ24_01720"
     CDS             <1..2091
                     /locus_tag="VGQ24_01720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 dependent-methionine synthase
                     activation domain-containing protein"
                     /protein_id="HEV8453576.1"
                     /translation="NNYALDYIEATRRIKAELPGVLVSGGVSNVSFAFRGNDPVREAI
                     HAAFLYHAIEAGMDMGIVNAGQLPIYTDIPPDLLERVEDVVLNRRPDATDRLLEVADS
                     VRGQAAGQAANLEWRKAPVAERLAHALVEGIADYIVEDTEEARKQAERPIHVIEGPLM
                     DGMNIVGDLFGAGKMFLPQVVKSARVMKRAVAHLIPYIEAEKVALGDASEARSNGRVL
                     LATVKGDVHDIGKNIVGVVLQCNNYEVIDLGVMVPCARILETARKEQVDIIGLSGLIT
                     PSLEEMSFVAGEMQREGFTIPLLIGGATTSRVHTAVKIEPNYKGPTVHVIDASRAVGV
                     AGNLRSDTLRPDYVAGVRSEYQDVRTQRGSRKAEERHQSIADARKNRLSIDWKAQRPP
                     KPCFTGIRALEDYPLQELVPLIDWTPFFQTWELAGHYPAILSDPVMGAAASSLFRDAG
                     ELLDRIVRERLLSACGVFGFFPANSVGDDIEVYADSSRGERTATIHTIRQQMVKPPGR
                     PNLALADFVAPRETGVADYVGAFAVTAGTGIEALVTRFESAHDDYNAILTKALADRLA
                     EAFAELLHQRVRREFWGYAPDESLDNQGLIKERYQGIRPAPGYPACPDHTEKRILFDL
                     LRVEESAGITLTESFAMLPAASVSGYYFSHPQSQYFGVGKIERDQVEDYARRKGMDVA
                     VVERWLSPNLNYER"
     gene            2092..3936
                     /locus_tag="VGQ24_01725"
     CDS             2092..3936
                     /locus_tag="VGQ24_01725"
                     /EC_number="1.5.1.20"
                     /EC_number="2.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional homocysteine
                     S-methyltransferase/methylenetetrahydrofolate reductase"
                     /protein_id="HEV8453577.1"
                     /translation="MPTLAELIADKRVHVLDGAMGTMLYSRGMFVNVCYDELSLTQPG
                     LVQEVHEAYVQAGAEILETNTFGANPVKLSSHGLDDETEAINRAAVTIARQAANGRAL
                     VVGAIGPLGIRLEPWGPTAREEAIGLFSRQARGLLEGGVDGFILETFSDLHEVEAALC
                     AVKALTGLPVIAQMTVGHDGNTSYGTTVETIASKLTDLGADVVGLNCSVGPAAMLDAL
                     ERMVEHTNRPLSAQPNAGLPRAVDDRRIYLASPEYMGSYARRMIQAGARFVGGCCGTT
                     PDHIKKIHDYVASLQPRRVSVGRSPAEPAGPAVVAALPLEQRSGFGRKLASGELVTAV
                     EILPPKGWNPAEMIKQCRLLQEAGVDAVNILDSARAQSRMGVLPAALIVQREVGLETV
                     FHYTCRDRNMLGMLSDLLGAAAGGLRNVLIVTGDPPTMGPYPDSTAVFDIDSIGLTNL
                     VRRLNQGLDPGGNPIGEPTRFVVGVALNQGADLEHELERFAWKVEAGADFAVTQPVFD
                     AGQLEHFLGRVRAPIPVIAGIWPLASLRNAEFLANEVPGVHVPHAVIERMRVAQERGT
                     AAARAEGVAIAAEMVDAIKDLVQGVQVTAPAGRIGPALDVLANLKARA"
     gene            complement(3920..4789)
                     /locus_tag="VGQ24_01730"
     CDS             complement(3920..4789)
                     /locus_tag="VGQ24_01730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453578.1"
                     /translation="MSNPNPTRPTSVLQRLREDRPLATVELRPPRTGLSAAATMELWI
                     DMYHSIQRLTRHDTIIFLTDNAVGLSEEENLGHLTANLAGDVDTSRIVPFLTSKHSIE
                     YCLMHASRAASHGFGALTVLGGDHTAGPPRCLPHARELRALIRQRVPSLDLGGWTNPH
                     RPASEQVDYLLDERFEAEFYLTQVVSHHSIRAVEQFLKEARRRGVPHPGVFGVFLYRS
                     ANPGTLARLADFFPVPAAELTREFEAGLTAEEICAKTVRALREVGADKVYLSNLGFEQ
                     VDARYRRIVTLLP"
     gene            4855..6018
                     /locus_tag="VGQ24_01735"
     CDS             4855..6018
                     /locus_tag="VGQ24_01735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HEV8453579.1"
                     /translation="MPDIASATPALTVLSEEETMFRDAVREFAETEIRPHVHQMDEAA
                     QFRQDIIPKFFDLGLMGIEVPEQYGGSGGTIFMAVLAIEELARVDASAAIYVDVHNTL
                     VNNAILRWANPEQQRRYFPRLAADLLGAFALSEPGSGSDAFALATRAERRGDDWVLTG
                     RKFWITNGAEAGLFIVFANADPSKGYKGITGFLVERGFPGFSIGKKENKLGIRASSTT
                     ELILEECQVPANNVLGPVGQGYKISIETLNEGRIGIGAQMLGVASGALEAATAYVKER
                     KQFGKAIAEFQAVQFQLAQMATDLEAARLMVYNAARLKDARLPFAQQAAMAKLFSSQV
                     ADRITSACLELFGGYGYSKEYPVEKFYRDAKIGTIYEGTSNMMLQTIAKGILK"
     gene            complement(6200..6745)
                     /locus_tag="VGQ24_01740"
     CDS             complement(6200..6745)
                     /locus_tag="VGQ24_01740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453580.1"
                     /translation="MRVHSSTRYVALVALAGALACASNKARTDTGPDEAAAARDTTTG
                     RDTTQNPPGYRGMERDTSLVPEHQQTPTDTFLQRQGQGAPQDTAGYSGMERVDTTGQR
                     ADTTGQWPDTTGQRTDTSGYNVNPGAGPDTSGMSGMDSTRMQGDTTGASSGAAGLDTT
                     GTSQTGDTTGYKQSQDTTTSR"
     gene            7318..8850
                     /gene="dacB"
                     /locus_tag="VGQ24_01745"
     CDS             7318..8850
                     /gene="dacB"
                     /locus_tag="VGQ24_01745"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HEV8453581.1"
                     /translation="MGALLDRVPVLAAQTDAMWLHERMVDWFETATRSAPGQWGIAIA
                     DQKGQMLWSMNPDASLMPASAVKLFTTGYARSVLGGTARRATRVVGTGIVDPENGEWL
                     GSWALELNGDPSLERAEGSGPTLYDLAVQLAGSGVRRLAGPLQVQSASGPADAVYPVV
                     WSSRHMGRLFAPLVGPLTLHENIVWLTVRPGKRVGERARLVETAPAGIGSLVTVTATT
                     YRGRRSRLRLRPRGGGGWVVTGTIGVRAAPRRLTVTARDPKVVLGAVWATALRKAGVA
                     WSRSAKMRTPLDGTPRVLAEVTSPPLDSLASEINRRSLNLGAELLLQWAGGRDQGPAN
                     LMAHIQQVTGQGEGVYLVDGSGLSYQDRVTPSAFVSYLARFPATSAGHNFPQLLPANG
                     TGTLRRMNSGFPGEGVVRAKTGTLGRVSTVVGYLGRPEGTLLVSLMYNGSRPGAARRA
                     QWKLFRLLGANGVVIPADTTGAEPPQLGGEQTARPEWWPADSTAGDSAAADSVAADSS
                     GG"
     gene            complement(8923..9075)
                     /locus_tag="VGQ24_01750"
     CDS             complement(8923..9075)
                     /locus_tag="VGQ24_01750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HEV8453582.1"
                     /translation="MLWTIFSILLVLWLLGIVSAYTFGGFIHVLLALAVAVVLMRVMQ
                     GQRPTD"
     gene            complement(9193..>10543)
                     /locus_tag="VGQ24_01755"
     CDS             complement(9193..>10543)
                     /locus_tag="VGQ24_01755"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEV8453583.1"
                     /translation="SNPGELASISGTKPINVVTKAPATSSELAELAKYGSVLKEIRPI
                     KAVIMTGTESSLASIRKLRFVAAANFDAERNIPPGPTVQLTDFTTGLSTWDLDAVDVT
                     QRTTPRSGNERTASKDGAGVYVAILDTGLLPTWRSYFPDERIATQYAKSFGGGGNDRG
                     AISEQPGKWEQDTHSHGTHVTSTVIGYNFNGTPINGVAPKATIIPVKVLNQNGSGWSS
                     VIAAGIVYVADLKTDALGGAPVVINMSLGGPNLDAVEKAALDYAIGKGVIIVASAGNS
                     GENGMGYPGAYAPVISAAASGWVREWRACDTNDFFRSWWITCDVPDPTNADDFYITDF
                     SSRELAGQDLDVAAPGSWVVGPFQVNQGQLSYFFLGGTSMASPHVAGIAALMAQKDNS
                     LTGPQAEAILTGSAIPLAAGCRDVFNLFSGATESVCWGTDATGSGLATADAALAATP"
BASE COUNT         1904 a         3270 c         3539 g         1830 t
ORIGIN      
        1 aacaactacg cgctggacta catcgaggcg acccgccgga tcaaggccga gttgccgggc
       61 gtactggtga gcggcggagt gagcaacgtc tcgttcgcct ttcggggcaa cgacccggtt
      121 cgggaggcca ttcacgcagc ctttctctac cacgccatcg aggccggcat ggacatgggg
      181 atcgtgaatg cgggtcagct cccgatctat accgacattc ctccggacct gctcgagcgg
      241 gtcgaggacg tggtgctgaa ccgccgtcca gatgccacgg accggctgct cgaggtcgcc
      301 gactcggtga ggggccaggc ggcgggccag gccgccaacc tcgagtggcg caaggcaccg
      361 gtcgccgagc ggttggcaca tgccctggtc gagggtatag cggactacat cgtggaagac
      421 accgaagagg cccggaaaca ggcggagcgg ccgattcacg tcatcgaagg cccgttgatg
      481 gacggcatga atatcgtggg cgatctgttc ggcgccggca agatgttcct gccccaggta
      541 gtcaaaagcg cccgggtgat gaagcgcgcc gtcgctcacc tgattccgta tatcgaggcc
      601 gaaaaggtcg ccctgggcga tgcgagcgaa gccaggtcga atgggcgggt gctcttggcc
      661 accgtcaaag gggacgtaca tgacatcggc aagaacatcg tcggtgtcgt gctccagtgt
      721 aacaactacg aggtcatcga tctcggcgtc atggtgccct gcgccaggat cctggaaacg
      781 gcccgcaagg aacaggtgga catcatcggc ctcagcggac tcatcacgcc ctcgctggag
      841 gagatgagct tcgtggccgg tgagatgcag cgggaagggt tcaccattcc gctcctgatc
      901 ggcggggcca cgacatctcg ggtgcacacg gcggtgaaga tcgagcccaa ctacaagggc
      961 cctaccgtgc acgtgatcga tgcctctcgc gcggtcggag tggctggaaa tctgcgcagc
     1021 gacaccctcc gccccgacta cgtggcaggg gtgcgctcgg agtaccagga cgttcgcacc
     1081 cagcgtggga gccggaaagc ggaggaacgt caccagtcca tcgccgacgc tcgcaagaac
     1141 cggctttcga tcgactggaa ggcgcagcgg ccgccgaagc cgtgctttac cggtatccga
     1201 gcgctggaag actatccgct ccaggagctg gtgccactga tcgactggac tccgttcttc
     1261 cagacctggg agctggccgg acactacccc gccattctca gtgatccggt catgggcgcc
     1321 gcggcaagca gcttgttcag ggatgcggga gagctgctcg atcgcatcgt gcgcgagcgc
     1381 ctgctcagcg cctgtggggt gttcggtttc ttcccggcca acagcgtcgg cgatgacatc
     1441 gaggtgtatg ccgactcgag ccgcggcgag agaacggcga ccatccatac catccggcag
     1501 cagatggtca agccgccggg cagacccaac ctcgcgctgg ccgacttcgt ggcccctcgg
     1561 gagaccggcg tggccgatta tgtcggagcc ttcgcggtca cggcgggcac gggaatcgag
     1621 gcgctggtga cgcgcttcga gtcggcccac gacgattaca acgcgattct caccaaggcc
     1681 ctggccgacc ggctggccga ggcgttcgcc gagctgctgc accagcgggt gcgccgggag
     1741 ttctggggct acgccccaga tgagtcgctc gataaccagg ggctcatcaa ggaacgctat
     1801 caggggatcc ggcccgcccc gggatatcct gcctgcccgg accatactga gaaacgcatt
     1861 ctcttcgacc tgctccgggt agaggagagc gcgggcatca cgctcacgga gagcttcgcc
     1921 atgctgccgg cggcatcggt gagcggctac tacttctccc acccacagtc gcagtacttc
     1981 ggggtcggca agatcgagcg agaccaggtc gaagactatg cccgccggaa ggggatggat
     2041 gtggcggtgg tcgaacgctg gctttctccc aacctgaact atgagcggta gatgccgacc
     2101 ctggccgagc tgatcgctga caagcgggtc catgtcctcg atggggccat gggcaccatg
     2161 ctgtacagcc gcggaatgtt tgtcaacgtg tgctacgatg agctgagtct cactcagccc
     2221 gggctggtgc aggaagtcca cgaagcgtac gtccaggcgg gcgcggagat cctggagacc
     2281 aacaccttcg gggccaaccc ggtcaagctg tcgagccacg gtctggacga tgagaccgaa
     2341 gcgatcaacc gcgcggccgt cacgattgcc cggcaggcgg cgaatggccg ggcactcgtg
     2401 gtgggtgcta tcggaccgct gggcatccgg ctggagccct ggggaccgac ggcccgggag
     2461 gaagcgatcg gcttgttcag ccgccaggcg cggggactgc tggagggtgg ggtggacgga
     2521 ttcatcctcg agaccttcag cgacctccac gaggtcgagg ccgcgctgtg cgccgtaaag
     2581 gcgctgaccg ggctcccggt catcgcgcag atgacggtgg gccacgatgg caataccagc
     2641 tacggtacga cggttgagac catcgcgtcg aagctcaccg acctgggcgc ggacgtggtc
     2701 ggtctcaact gttcggttgg tcccgcggcg atgctcgacg cgctcgagcg catggtggag
     2761 cataccaacc ggccgctatc ggcccagccc aacgccggat tgccccgggc ggtcgatgat
     2821 cggcggatct acctcgcgag cccggagtac atgggctcct acgccaggcg gatgatccag
     2881 gccggggctc gcttcgtcgg cgggtgctgc ggtaccactc ctgatcacat caagaaaatc
     2941 cacgactacg tggccagtct gcaaccccgt cgcgtgtcgg tgggccgttc accagccgag
     3001 cccgccgggc ccgccgtggt ggccgcgctt cctctggagc agcgctccgg gtttgggcga
     3061 aagctcgctt ccggcgagtt ggtgaccgcg gtggaaatcc tcccgcccaa agggtggaat
     3121 ccagccgaga tgatcaagca gtgccgactg cttcaggagg ctggggtgga tgcggtgaac
     3181 atcctcgata gcgcacgggc gcagagccgg atgggggtac tgccggcggc tttgatcgtt
     3241 cagcgggagg tcggactcga gaccgtcttc cactacacct gccgtgaccg taacatgctg
     3301 ggcatgctga gcgatctgct cggcgccgcg gccggtggct tgcgcaacgt gctgatcgtg
     3361 accggcgatc cgcctaccat gggaccgtat ccggattcga cggcggtgtt cgatatcgac
     3421 agcatcggtc tcaccaacct ggttcggcgg ctcaaccagg gactcgaccc aggcggcaac
     3481 cccataggcg aacccaccag atttgtcgtc ggcgttgccc tcaaccaggg agcggacctg
     3541 gagcacgagc tggagcggtt tgcctggaag gtggaggcgg gagccgactt cgcggtgact
     3601 cagccggtgt tcgatgccgg gcagctggag catttcctgg ggcgcgtccg ggcacccatt
     3661 ccggtcatag ccgggatctg gccgctcgcc tcgcttcgca atgccgagtt tctggccaac
     3721 gaggttcccg gggtgcacgt accccacgct gtgatcgagc ggatgagggt ggcccaggag
     3781 cggggcaccg cggcggcccg ggctgagggg gttgccatag cggcggagat ggtcgatgcg
     3841 atcaaggatc tggtgcaagg cgtgcaggtg acggccccgg ccggtcgcat cggccccgct
     3901 ctcgatgtcc tggcgaacct caaggcaaga gcgtgacaat cctgcggtac cgcgcatcta
     3961 cctgctcgaa accaagattg ctcaaataga ccttatccgc gcctacctcg cggagagcac
     4021 gcaccgtttt cgcgcagatc tcttcagcgg tcaatcctgc ctcgaactct cgagtgagct
     4081 cggccgccgg taccgggaaa aagtctgcca accgcgccag ggtgccggga ttggcgctcc
     4141 ggtagagaaa cacgccgaag acacccggat gcggaacgcc ccgccgccgg gcttccttca
     4201 ggaattgctc caccgcacgg atgctatggt gggagaccac ctgggtcagg tagaactcgg
     4261 cttcgaaccg ttcgtccaga aggtagtcca cttgctcgga cgcgggacga tgcgggttgg
     4321 tccagccacc gaggtcgaga ctgggcaccc gctggcgaat gagagcgcgc agctcccggg
     4381 cgtgcggcag gcaacggggg ggccccgccg tgtgatcgcc accgagcacg gtcagcgcgc
     4441 cgaacccatg cgaagcagcc cgcgaggcgt gcatcagaca atattcgatg gaatgtttgg
     4501 aggtcaggaa ggggacgatc cgggaagtat cgacatcgcc cgccaggttg gcggtcaggt
     4561 gacccaggtt ctcctcttcc gaaaggccga cggcattgtc cgtgaggaaa atgatcgtgt
     4621 cgtgccgggt gaggcgctgg atcgaatgat acatgtcaat ccagagctcc atggtggcgg
     4681 cggcggagag cccggtgcgt ggtggacgca gctccaccgt ggcaaggggg cggtcttccc
     4741 gcaaccgctg gagcacagac gtgggacgag tagggttcgg attagacatg gtgggaagga
     4801 agctaactag agtaagttcc gtccgacgcg cacctccccc aacgagccca tgagatgccc
     4861 gacatcgcca gcgccactcc cgctctgacc gtgctgtccg aggaagaaac catgttccgg
     4921 gacgcggtcc gcgagtttgc cgagaccgag atccggcctc atgtgcacca gatggacgag
     4981 gcggcgcagt tccggcagga catcatcccc aagttcttcg atctgggcct catgggcatc
     5041 gaggtgccgg agcagtacgg cggcagcggc gggaccatct tcatggccgt cctggccatc
     5101 gaggaactgg cacgggtaga cgcgtcggcc gccatctacg tcgacgtgca caacacgctg
     5161 gtcaacaatg ccattctccg atgggccaac cccgagcagc agcgccgcta cttccctcgc
     5221 ctggcagccg acctccttgg ggcctttgcc ctgtccgagc cggggagcgg cagcgacgcg
     5281 ttcgccttgg ctactcgggc cgaacggcga ggggatgatt gggtattgac cggccggaaa
     5341 ttctggatca ccaatggcgc cgaagccggg ttgttcatcg tctttgccaa cgccgaccca
     5401 tcgaagggtt acaagggcat caccggcttt ctggtggagc ggggcttccc cgggttctcc
     5461 atcggcaaga aggagaacaa gctcggcatc cgagcctcca gcaccaccga actgatcctg
     5521 gaggaatgcc aggtcccggc gaacaatgtg ctcgggccag tggggcaggg ctacaagatc
     5581 tcgatcgaga ccctgaatga gggtaggatc ggcatcggcg cgcagatgct cggcgtggca
     5641 agcggcgcgc tcgaggccgc gacggcctac gtgaaggaaa ggaaacagtt cggcaaggcc
     5701 atcgcggaat ttcaggcggt gcagttccag ctggcacaga tggcgaccga cctcgaggcc
     5761 gcccggctga tggtctacaa tgcggcgcgg ctcaaggatg cgcggctgcc gttcgcgcag
     5821 caggcagcga tggccaagct gttcagctcg caggtggccg accggattac gtctgcgtgc
     5881 ctggaactgt tcggtggcta tggctactcg aaggagtacc cggtggagaa gttttatcgt
     5941 gatgcgaaga tcggcacgat ctacgagggc accagcaata tgatgctgca gacgatcgcg
     6001 aaagggatac tgaagtaggc cccgcctact cctcccccgt ccataccagc gacagtcatc
     6061 gttccggtac gcaacgcgtc ccggcacggc gagcgctcgt gactcggctc acccccgagt
     6121 tcgcgcgcgg agccgacaaa aaatcggggg cgccaatggc gcccccgaag atggaccctg
     6181 aacgaccgac gccgatccgc tagcgagaag tcgtcgtgtc ctgcgactgc ttgtagccgg
     6241 tagtgtcgcc tgtctgcgac gtgccggtgg tgtccagtcc cgcggcgcca ctgctggcac
     6301 cggtggtatc gccctgcatg cgggtcgaat ccatgccgct catgccggag gtgtctggac
     6361 ccgcccctgg attaacgttg taaccgctgg tgtcggtccg ctggccggtg gtatcaggcc
     6421 actggccggt ggtgtcggcc cgctggccgg tggtatccac gcgctccatg ccggagtagc
     6481 ccgccgtgtc ctgcggagct ccctgaccct gtctctggag gaaggtgtcc gtgggtgtct
     6541 gctgatgttc cggaacgagg ctcgtatccc gctccatgcc acgatagccg ggcgggtttt
     6601 gggtggtgtc gcgaccggta gtggtgtcac gggcagccgc cgcctcgtcc gggccagtgt
     6661 ccgttcgggc cttgttactg gcacacgcca aggcaccggc gagtgccacg agcgctacat
     6721 agcgggtgga agagtgtact ctcattagac ctcctcagat cgcctaactc gtgaagtcat
     6781 ctgggtcccg cgtcgtggcg ccgaatccgg ccgcctgcgc tacgcccaat agaatcgttc
     6841 agcccggagc aaagcgacga caacacatcg cagatgccgt cgcgggctga tcaagctctg
     6901 ggctccgcgc ccgcgctatc ataccggggg tgggggggcc aatctgtgac ttgggtcacc
     6961 cagtgcagca tgcctgctgc ggtcgatcgg tctcgtcggc gcgcagaccc ggaaattggc
     7021 accctagcgc agccaaaggt gggcccggta attgctgatt ccgattggac acgggttgga
     7081 ccggcggcgg ggtccccgaa tcggccgctc cagataaagc gcttcgcaat atgccgttac
     7141 gtctggaccg aagagctggc agcgggatac attgcgccgt tacgtgcgtt gcttctacac
     7201 ggtcccgacg tccgcatctc ggcacttcag tacgtcaccc gacactatac gacttaacca
     7261 aggaactcag tggaacgtct gtcccgctta cgccacctct gcgctgcagt cgcccttgtg
     7321 ggggcgctcc tcgaccgcgt gcccgttctc gcggcacaga ccgatgccat gtggctgcac
     7381 gagcgcatgg tcgattggtt cgagacggcc acccgctcgg cgccaggaca atggggcata
     7441 gccattgccg atcagaaggg gcagatgctg tggagcatga atccggatgc ctcgctgatg
     7501 ccggcgtcgg cagtcaagct ctttacgacc ggctatgccc ggagtgtgct cggcggcacc
     7561 gcaagacggg cgacccgcgt ggttggcacg gggattgtgg accccgagaa cggcgaatgg
     7621 ctgggtagtt gggcactcga gctgaacggc gacccttctc tcgagcgcgc cgagggatcc
     7681 gggccgacgc tttacgatct ggccgtgcag ttggccggct cgggcgtccg ccgtctggcg
     7741 ggaccgctcc aggtgcagag cgccagcggt ccggccgacg cagtctatcc ggtcgtctgg
     7801 tcttcccgac atatggggag gctcttcgct ccactggtcg gcccgctcac gctgcacgag
     7861 aatatcgtct ggctgacggt gcgtcccggc aagagggtag gagaacgggc ccgcctggtc
     7921 gagaccgctc cggcgggaat cggctcgctg gttactgtga cggcaacgac gtaccgcggc
     7981 cgccgctctc ggctccggtt gcggccgcgc ggaggcgggg ggtgggtggt aactggaacc
     8041 attggcgtgc gggctgcccc acggcggctc accgtcaccg ctcgcgaccc taaggtggtt
     8101 ctcggcgccg tgtgggctac cgcgctgcgc aaggcgggag tcgcgtggag ccgatccgcc
     8161 aagatgcgaa ccccactgga cggcacaccg cgggtccttg ccgaggtgac gtcgccgccg
     8221 ctggactcgc tggcaagcga gatcaatcgg agaagcctga acctgggtgc tgagctgctc
     8281 ctccagtggg cggggggacg ggatcagggt cctgcgaatc tgatggccca cattcagcag
     8341 gtgaccggtc agggtgaagg ggtctatcta gttgacggca gcggcttgtc ctatcaggac
     8401 cgggtgacgc catctgcgtt cgtttcttac ctggccaggt tcccggcaac atcggccggc
     8461 cacaatttcc cccagctcct tccggccaac ggaaccggta cgctcagacg tatgaacagc
     8521 ggcttccccg gtgagggcgt cgttcgcgcc aagactggta cactcggccg ggtctcgacc
     8581 gtggtgggtt acctgggccg tccggaggga acgctgctgg tctctctgat gtacaatgga
     8641 tcgcgtcccg gcgcggcccg ccgggcgcag tggaagcttt tccgcttgct cggagccaac
     8701 ggtgtggtga ttccggccga taccacgggt gccgagccgc cgcagctcgg cggcgagcag
     8761 acggctcggc cggagtggtg gcccgcggat tccacagctg gagactcggc cgcggcggac
     8821 tcggttgcgg cagactcgtc cggcgggtaa ttgcgggcgg aggacgaaag cagaacggcc
     8881 cagctggtgc tgggccgttc gactgtccgg cagcggccag gatcagtcgg tcggtcgctg
     8941 gccctgcatc acccgcatca ggaccacagc cacagccagc gcaagcaaca cgtgaatgaa
     9001 tccgccgaag gtgtaggcgg agacgatccc aagcaaccag agaacgagca ggatagagaa
     9061 gatggtccag agcatggcgg cctcatggtg ggtgcctcgc ctatacatat atgcgaaaat
     9121 gggaggtccg gcaaacagaa ggcccgcctt tcggcgggcc ttccttggtg gtgcaagctg
     9181 cgggtaccgc cctcagggtg tggccgctaa agccgcatcc gccgtagcca ggccagagcc
     9241 ggttgcgtct gtcccccagc acaccgactc cgtcgctcca ctaaaaaggt tgaagacatc
     9301 acggcatcca gcagcaagcg gtatggcact gccggtgaga attgcctcgg cctgaggtcc
     9361 agtcagggaa ttgtcctttt gggccatcag cgcggctatg ccagccacat gcgggctggc
     9421 catcgaggta ccgccaagga agaagtagct gagctgaccc tggttgacct ggaacggccc
     9481 gacaacccag gagcccggcg ccgcgacatc cagatcctgt cccgccagct cacgactcga
     9541 gaaatcggtg atatagaagt cgtcagcgtt cgtcggatca gggacatcgc acgttatcca
     9601 ccaggagcgg aagaagtcgt tcgtatcaca ggccctccac tcacgaaccc atccggatgc
     9661 cgcggcagaa atgactggtg cataggcgcc gggatatccc atgccgttct ctccggagtt
     9721 gccagcggaa gccacgatga tgacaccctt gccgatagcg tagtcaaggg ctgccttctc
     9781 tacagcatcg aggttgggac cgcccaggct catgttgatg acgacgggag cgcccccaag
     9841 cgcatcggtc ttgagatcgg caacgtacac gattcctgcc gcaataaccg aggaccatcc
     9901 actgccgttc tgattaagaa ccttgacagg gatgatggtg gctttcggcg ccacgccatt
     9961 gattggagtg ccattgaagt tgtagccgat gaccgtgctg gtcacgtggg tgccgtgcga
    10021 gtgtgtgtcc tgctcccact tgcccggctg ctcggaaata gcgcctcgat cgttgccgcc
    10081 cccgccgaac gacttggcgt actgagtcgc gatccgctca tccgggaagt acgatcgcca
    10141 ggtcgggagc aggccggtgt ccaggatagc cacgtaaacg cccgcaccat ccttggacgc
    10201 ggtgcgctcg ttacctgaac gtggggtcgt ccgctgggtc acgtcaaccg cgtccaggtc
    10261 ccaagtgcta agtccagtag taaaatcggt cagctggacc gttggcccgg gggggatgtt
    10321 ccgctcggca tcgaagttcg ccgccgccac gaaccggagc tttcggatgg acgcgaggct
    10381 cgattcggtt ccagtcataa tgacggcctt gatcggccgg atctccttca gcacgctgcc
    10441 gtacttggcg agttccgcca attctgacga tgtggctgga gccttggtga cgacgttgat
    10501 gggcttggtc cccgagatcg aggcgagctc gcccggattc gag
//
LOCUS       DASYRV010000077         3699 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3975819, whole genome shotgun sequence.
ACCESSION   DASYRV010000077 DASYRV010000000
VERSION     DASYRV010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3699
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3975819"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..411
                     /locus_tag="VGQ24_01760"
     CDS             <1..411
                     /locus_tag="VGQ24_01760"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEV8453584.1"
                     /translation="RVGLLALLAIAGASPALAQAPDAAAPPAKPEVSAPPGPAAGYSP
                     ELIAKGDALFHASGNCYACHGSKGEGLVGPNLTDAEWIHSKGSYDEIVAQINHGVSKE
                     ESKSGIPMPPKGGAALSDDDVKAIAAYVYSLSHQ"
     gene            complement(440..1198)
                     /locus_tag="VGQ24_01765"
     CDS             complement(440..1198)
                     /locus_tag="VGQ24_01765"
                     /inference="COORDINATES: protein motif:HMM:NF015763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453585.1"
                     /translation="MLGLDESIAKLGSSGMMALLVAILLGLRHATDPDHLTAVSTLFL
                     ADRRHGPRRATLLGLAWGLGHAATLFGFGLPVVLFGRYLPDPVQRGAEAVIGLLITLL
                     AVRLLVRWRRGYFHVHAHSHAGVRHAHPHAHEHHGGSDRHPAQHIHSHAEELGRSPAA
                     AFGIGLVHGVGGSAAVGVLLVGGVTGRVNGVLALLVFAAATAMSMALVSTVFGFALAR
                     GAVRRRVTDLVPLLGAASLIFGIWYSLGALQGPG"
     gene            1347..3428
                     /locus_tag="VGQ24_01770"
     CDS             1347..3428
                     /locus_tag="VGQ24_01770"
                     /inference="COORDINATES: protein motif:HMM:NF015168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEV8453586.1"
                     /translation="MTTNRLSGSPSAYLQSAAHQPIHWYPWGGEAFAAAEAGDKPVLL
                     DVGAVWCHWCHVMDGETYEDPAIADFVNQHFVCIKVDRDERPDVDARYQRAVQTITQQ
                     GGWPLTAFLTAKGEVFFGGTYFPPDDRYGRPGFRSVLAGVLDAYHGRRDQVLTQAGAI
                     RRFLDEHLDEAAPGEVSPALLDKAVTQMTRVFDPVNGGFGAEPKFPNPGAITLLLHRW
                     HDQPSDQIRNIVDRTLQGMARGGIHDQLAGGFHRYSVDARWIVPHFEKMSYDNSELLK
                     VYLDAYALFGTEEYAGVARGIVRWVREVASDPEGGYAASQDADVGLDDDGDYFTWTRD
                     EAGAILDPDELEVAAAYYDIGTAGEMQHDPGKNVLFVYASTANIALRTGRTLEATERL
                     LQSAQDKLRAARARRPAPFVDRTRYTNWNAMMASAMLRAAAVLGDEWARDHALRSLTR
                     IRDESAEPDAVAHTPGGMAGLLDDQVQVAAAALDAYELTGERAWLEWSERVMDRVWAD
                     YWDNDSSGLFDTARGRAGEEGLLPARAKPVQDTPTPSPNGVAGIVVARLHELIGEARW
                     KERGVTLVSAFAGRAEELGLHAATYLLSVDWQVNPATHLVIVGDPDDPISTAMHRSAS
                     AAFLPRRVVQFLSPADARDRALPAALRSMVSNGSSPRGYACAGTSCSPPAEDDPSWVA
                     TLESLHPMVPA"
     gene            3490..>3699
                     /locus_tag="VGQ24_01775"
     CDS             3490..>3699
                     /locus_tag="VGQ24_01775"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEV8453587.1"
                     /translation="MAKNATIETSKGTIKAELFDSEVPGTVSNFEKLANSEFYDGTRF
                     HRVIPNFMIQGGDPLSKEPGNPRVGT"
BASE COUNT          692 a         1220 c         1218 g          569 t
ORIGIN      
        1 cgtgtcggcc ttcttgcgtt gctcgcaatc gccggggcct cgcccgcgct agcccaggca
       61 cccgatgcgg ctgccccgcc tgcgaagcct gaagtctctg ccccgcccgg gccggcagcg
      121 ggctacagtc ccgagctcat cgcgaagggc gacgccctgt ttcacgcgtc aggtaattgc
      181 tatgcctgcc atggaagcaa aggtgagggg ctggttggtc ccaatctgac cgatgcggag
      241 tggattcaca gtaaggggag ctacgatgag atcgtggccc agatcaatca cggcgtttcc
      301 aaggaagaat ccaagagcgg gataccgatg cctcccaagg gcggcgcagc gctgagcgat
      361 gacgacgtca aggctatcgc ggcctatgtc tactcgctga gccatcagta gggactgccc
      421 aacgtgcagg ccttatagct cagccagggc cttgaagggc tccgagagaa taccagatac
      481 cgaagatcag gctggcggcg ccaaggagcg gaacgaggtc ggtcacccga cgcctgacag
      541 ccccacgggc cagcgcgaat ccgaagacgg tggacaccag cgccatcgac atcgccgttg
      601 ccgcggcgaa caccagcagg gcaagcacgc cgttgacccg cccggtgacc ccacccacca
      661 ggagtactcc cacagcagcc gagccgccga ccccgtgaac cagaccaatg ccgaaggcgg
      721 ccgctgggga gcggccgagc tcttcggcat gggaatggat atgctgggcc gggtgtcggt
      781 cactgcctcc gtgatgctcg tgcgcgtggg gatgagcgtg gcgaactccg gcgtggctgt
      841 gcgcatggac gtggaagtac ccccgtcgcc agcggacaag gagcctcacg gcgagcagtg
      901 tgatcagcag gccaatgacg gcctcagcgc cccgctgaac cgggtccggc aaataccggc
      961 caaagagcac gaccgggagc ccgaacccga acagtgtggc ggcgtgaccc agcccccacg
     1021 ccagccccag cagcgtcgcg cggcggggac catggcgacg atctgccagg aacagcgtgg
     1081 agacagcggt gaggtgatcc ggatcggtcg catgtcgcag gcccagcaga atggccacca
     1141 gcagggccat catgccgctg ctgcccagct tcgcgatcga ttcatccaat ccgagcatgc
     1201 ggctccctcg tgcggggttg cggacaccgg gtttcgtggc gttgagagat agtctgggat
     1261 agcgcggagc gctacgtaag cgagagcggc gcgcccggtc gcaaatcacc gacgccgctc
     1321 ccgaaacccg gctaacttcc cctccaatga ccaccaaccg cctgtccggc tcgccgtcgg
     1381 cataccttca gtcggctgcg catcagccga tccactggta cccctgggga ggggaggcat
     1441 tcgccgctgc cgaggcgggg gacaagccgg tgctgctcga cgtcggcgcc gtctggtgcc
     1501 attggtgtca tgtcatggat ggcgagacgt atgaagatcc tgccatcgcc gacttcgtca
     1561 accagcactt cgtctgcatc aaggtggatc gggacgagcg tcccgacgtg gacgcccgct
     1621 atcagcgtgc ggtccagacg atcacccagc agggcggttg gcctctcacc gctttcctga
     1681 ccgccaaagg cgaggtcttc ttcggtggga cctacttccc gccggatgac aggtacggcc
     1741 ggccgggctt tcgcagcgtg cttgccggcg tactggacgc ataccacggc aggcgagatc
     1801 aggtcctgac gcaggcggga gcaatccgtc gctttctcga cgagcatctc gacgaagccg
     1861 ccccagggga ggtctctcct gccctcctgg acaaggccgt aacccagatg acccgggtgt
     1921 tcgatccggt gaacggtggg ttcggggcag agcccaagtt ccctaacccg ggcgccatca
     1981 cgctgctgct gcaccgctgg cacgatcaac cgtcggatca gatccggaac attgtggacc
     2041 ggacgctcca gggtatggca cgcggcggca tccacgatca gctcgcggga ggattccacc
     2101 gctacagtgt ggacgccagg tggatcgtgc cgcacttcga gaagatgtcg tacgacaact
     2161 ccgagctgct gaaagtgtac ctcgatgcct atgccctgtt cggcaccgag gagtacgccg
     2221 gcgtggcccg cggcatcgta cgctgggtac gcgaggtcgc gtccgatccg gaggggggat
     2281 acgctgcgag ccaggatgcc gacgtgggac tcgacgatga cggcgattac ttcacctgga
     2341 cccgcgacga agccggagcg atactcgacc cggacgagct ggaggtcgct gcggcctatt
     2401 acgacatcgg caccgcgggg gagatgcagc acgacccggg caagaacgtg ctcttcgtct
     2461 acgcgtccac cgcgaatatc gcactgcgca ccggccggac gttggaggcc acggaacgtc
     2521 tgctccagtc ggcccaggac aagttgcggg ccgcacgggc gcggcggccg gcccccttcg
     2581 tggaccggac ccgttacacc aactggaacg ccatgatggc ctcggcgatg cttcgggcag
     2641 ccgcggtgct gggcgacgag tgggcccgtg accacgccct tcgctcattg acgcgcattc
     2701 gtgacgaaag cgccgagccg gatgccgtcg ctcacacccc aggcggcatg gccgggctcc
     2761 tcgacgacca ggtccaggtt gccgccgccg cgctcgacgc ctacgagctc accggcgagc
     2821 gcgcatggct ggagtggagc gagagggtga tggatcgggt ctgggccgac tattgggaca
     2881 acgacagcag cggcctgttc gacaccgcca ggggtcgcgc cggcgaagaa ggcctgctgc
     2941 ctgcccgggc caagccggtt caggacaccc cgacaccctc acccaatggc gtcgccggaa
     3001 tcgttgtcgc ccgactccac gagctcatcg gagaggcccg gtggaaagaa cgtggagtga
     3061 ctctggtatc ggcgttcgcc ggacgggccg aggaattggg actccatgcc gcaacctacc
     3121 tgctctcggt ggactggcag gtcaacccgg ccacccatct cgtgattgtg ggcgaccccg
     3181 acgatccaat cagcaccgcg atgcaccgat ccgcctcggc cgcgttcctt ccccgccgcg
     3241 tggtccagtt cctctccccg gccgacgcgc gggacagggc gctgccagcg gcgctgcgaa
     3301 gcatggtatc gaacgggtcg agcccgcgtg gctacgcctg cgcgggcacc agctgtagtc
     3361 cgccggccga agacgacccg tcctgggtag ccacgctgga atcgctgcac ccgatggtgc
     3421 cggcatgagg cgaacgtcgt aagccacagc agttacattt gggcagacct ctttagaggg
     3481 acaacatacg tggccaagaa cgcgacgatc gagacgagca aaggcaccat caaagccgag
     3541 ctgttcgact ccgaggtgcc gggcaccgtg agcaatttcg agaaactggc gaacagtgaa
     3601 ttctatgacg gaacccggtt ccaccgggtc atcccgaact tcatgattca gggtggtgat
     3661 ccgctctcca aggagcccgg gaacccccgg gtcggcacc
//
LOCUS       DASYRV010000078         1659 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1692075, whole genome shotgun sequence.
ACCESSION   DASYRV010000078 DASYRV010000000
VERSION     DASYRV010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1659
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1692075"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1643)
                     /locus_tag="VGQ24_01780"
     CDS             complement(<1..1643)
                     /locus_tag="VGQ24_01780"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEV8453588.1"
                     /translation="MNARAAALVNGRPADYIGRILWEAFPESVGGPFDKAYRRAMAEG
                     HPVRVEAFYAPIAKWIQANAYPSPEGLTIVGQDVTDRLRAHEATVRLAAIVASSDDAI
                     VGKQLDGTVTSWNAAAEQIFGYTAAEMVGQTVYRLIPPELHDAERDALRRVSRGDPVE
                     FSETDRIRKDGQRIHIALTLSPIRDGSGQVVGASSIKRDITRRKRAETALDEANARSR
                     DLAQALDTAQAIIRDLDGRITYWSSGSARLYGWTAEQAVGRLEHELLLTLFPADLGEI
                     QTSLLAQGRWEGELIHVAKDGRRVNVASQWALRRDEKGQPGSVTEVNTDITARRQAEE
                     RMRRSDRMEVVGQLAGGVAHEANNQMTVVLGATEFLLARTDLPQMARNDLAQVRGAAE
                     RTAAITAQLLAFSRRQVLQPQVLDADKVVQGLDGMLRRALGERSTLHVELRAGSCRVK
                     ADPGQLTQVLLNLVLNARDAMPLGGRLSIETDTTVLTEQYAEGHPGVEIRAGPYVVLS
                     ISDTGHGISPDSMHHIFEPFYTTKPVGKGTGLGLATVYG"
BASE COUNT          257 a          549 c          528 g          325 t
ORIGIN      
        1 atgccgtaga ccgtggccaa ccctaaaccg gtacccttcc cgaccggctt tgtggtgtag
       61 aagggctcga agatgtggtg catggagtcc ggcgagattc cgtgtccggt gtcgctgatg
      121 gagagaacga cgtagggtcc cgctcgtatc tctacccccg gatgcccttc cgcatattgc
      181 tcggtcaaca cggtcgtgtc ggtctcgatt gagagccggc cccccaacgg cattgcgtct
      241 cgagcgttga gcaccaggtt gaggagcacc tgcgtcagct gcccgggatc ggccttcacc
      301 cggcatgacc cggcccgaag ctctacatga agggtcgatc gttcccccag cgcgcgccgg
      361 agcattccgt cgagtccttg gacgaccttg tctgcatcga gcacctgagg ctgaagcacc
      421 tgacgccggc tgaacgccaa cagctgggcc gtgattgcgg cagtgcgttc ggccgcgccg
      481 cgcacctgtg cgaggtcatt ccgggccatc tggggcaggt ccgtgcgcgc caggaggaac
      541 tcggttgccc ccagcaccac ggtcatctga ttattcgcct cgtgcgccac gcctccggcc
      601 agctgcccta ccacctccat gcggtcgctc cgccgcatcc gctcttctgc ctggcgccga
      661 gccgtgatgt cggtgttcac ttcggtcacg gacccgggtt gacccttttc gtcccggcgg
      721 agagcccact ggctggcgac gttgacccgc cggccgtcct tcgccacatg gatgagctcg
      781 ccttcccacc ggccctgggc gaggagcgaa gtctggatct cacccaagtc agcggggaac
      841 aaggttagta gcagctcgtg ctcgagccgg ccgaccgcct gctcggccgt ccacccatac
      901 aggcgggccg agccgctgct ccagtatgta atccggccat caaggtcccg gatgatggcc
      961 tgggcggtat cgagggcctg ggccaggtcg cggctcctgg cattggcttc gtcgagcgcg
     1021 gtctcggctc gcttccgcct ggtgatgtcg cgcttgatcg atgaagctcc gacgacttga
     1081 ccggagccat cccgtatggg cgacagggtg agggcgatgt ggatgcgctg gccatccttt
     1141 cggatgcggt cggtctcgga gaactcgacg ggatctcccc gggatacccg gcgcagcgca
     1201 tcacgttcgg cgtcgtgcag ctcgggaggt atgagtcggt agaccgtctg acccaccatc
     1261 tcggccgcgg tgtagccgaa tatctgctcc gcagctgcgt tccagctggt gaccgtgcca
     1321 tccagttgct tgcccacgat cgcatcgtct gaagaagcga cgattgcggc taatctgacg
     1381 gttgcttcgt gggcgcgaag ccgatcggtg acatcctggc ccacaatggt gagcccctca
     1441 ggtgatgggt acgcgttggc ctggatccat ttagcgatcg gggcatagaa ggcttccacc
     1501 cggactggat gcccctccgc catggcccgg cggtatgcct tatcgaatgg tcctcccacg
     1561 ctctcgggaa aggcctccca gaggatgcgt ccgatgtagt ccgccggtcg cccattcacg
     1621 agcgccgccg cgcgcgcgtt catgtaggtg attcgccac
//
LOCUS       DASYRV010000079         3332 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3132102, whole genome shotgun sequence.
ACCESSION   DASYRV010000079 DASYRV010000000
VERSION     DASYRV010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3332
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3132102"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..511)
                     /locus_tag="VGQ24_01785"
     CDS             complement(<1..511)
                     /locus_tag="VGQ24_01785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEV8453589.1"
                     /translation="MLPRALFRSGLVPTAFALLLPANLTAQSKPTVEQFLNPASPLEL
                     TAAKKADRIAWVSYERGMRNVYAAGAPAFAPVRLTRFLEDDGTDVSDVSLSDDGTLAV
                     FVRGSAPNRVGWIANPSHDPNGAERAIWAARTDGSAAWRVVAGGAPELSPDGRFVLYV
                     RDGQIYRGRV"
     gene            628..918
                     /locus_tag="VGQ24_01790"
     CDS             628..918
                     /locus_tag="VGQ24_01790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF485 domain-containing protein"
                     /protein_id="HEV8453590.1"
                     /translation="MTAQPPDPATELGFRALAYRQRRFALVLTLAMIVLYFGFILLIA
                     YNKPLLARKLTPGLSLGILLGAAVIVCSWLLTWVYVRWANTHYDSELDRHRG"
     gene            935..2473
                     /locus_tag="VGQ24_01795"
     CDS             935..2473
                     /locus_tag="VGQ24_01795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682642.1"
                     /note="Members of the Solute:Sodium Symporter (SSS), TC
                     2.A.21 as described in tcdb.org, catalyze solute:Na+
                     symport. Known solutes for members of the family include
                     sugars, amino acids, nucleosides, inositols, vitamins,
                     urea or anions, depending on the system; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015370 - solute:sodium symporter activity
                     [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/solute symporter"
                     /protein_id="HEV8453591.1"
                     /translation="MATRIGEPNPVAMGFFFLFIATTLAITWWAARRTRTTEHFYAAG
                     RTVSPGQNGVALAGDYMSAASFLGIAGLVSTTGFDGLIYSTGWLVGWPVVLFLVAEPL
                     RNLGKYTFADVVASRLRQTPVRVAAALGTLVTVAFYLIAQMVGAGSLVRLMFGFSYET
                     AIVIVGIAMIAYVLFGGMIATTWVQIVKAVLLLCGAAILAGLVLLRFHWSPAALFAAA
                     AERYGDAVLAPGRLVSKPLDAVSLGIALMFGTAGLPHILMRFYTVPDATAARKSVFYA
                     TGLIGAFYLMTFVLGFGAMVLVGPAAIKAVEPGGNMAAPLLAEFLGGTPFLGFIAAVA
                     FATILAVVAGLTLSGAAALSHDLWVHVVRKDHATATEQLRVARVATVGLGVLGVLLGI
                     TFKGQNVAFMVGLAFAIAASANFPALVLSIFWRRYTTAGAVTSMVTGTVGALVLIYLS
                     PTVQVDILKHPSAWFSLRNPALVTMPLSFLLGAAVSLAGRRPKEAAGFDQLERRVHLG
                     SRPT"
     gene            complement(2470..2793)
                     /locus_tag="VGQ24_01800"
     CDS             complement(2470..2793)
                     /locus_tag="VGQ24_01800"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEV8453592.1"
                     /translation="MISRGSVCWVESGSGPRIPVLVIQAESFNASRIPTVVVVPLSSN
                     LRLTEAPGNVLIPVSDSRLGRDLVANVAHPLTLERRWLRETPGRVGDPVLGAIANGLR
                     LVLDL"
     gene            complement(2790..3029)
                     /locus_tag="VGQ24_01805"
     CDS             complement(2790..3029)
                     /locus_tag="VGQ24_01805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453593.1"
                     /translation="MKTAISLPDQLFRDADAAATRLGISRSELYAKALAEYLSRLHGS
                     QITARLNSVYQTVEGRPEQSLAALQSRGIPREDHW"
BASE COUNT          512 a         1107 c         1069 g          644 t
ORIGIN      
        1 tcacccggcc ccgatagatc tgaccgtccc gcacgtagag gacaaaacgg ccgtcgggtg
       61 agagctcagg ggccccgccc gcgacgaccc gccaggcggc actgccgtcc gtccgcgccg
      121 cccagatggc gcgctccgca ccgttcgggt cgtgtgacgg attcgcgatc cagcctaccc
      181 gattaggcgc cgagccccgg acgaagacgg cgagcgtgcc gtcatccgac aggctcacat
      241 cgctgacgtc ggtgccgtcg tcctccagga agcgggtgag ccgtaccggc gcaaacgccg
      301 gtgccccggc tgcataaacg ttgcgcattc cgcgctcata cgagacccag gcgatccggt
      361 cggctttctt ggccgcagtc agctcgagcg gggaggcggg gttcaggaac tgctcgaccg
      421 tcggcttgga ctgagcggtg agattcgccg ggaggagcag agcgaatgcc gtcgggacaa
      481 gcccggagcg aaacagcgcg cgggggagca tggccacctc ggggaaaggc tgttgcgatt
      541 tcactgcgaa aggaccgacc cggaagatac gcgattccag cgcactcggt tgacaggacg
      601 atcttcggac acgatcctca atcccttatg accgcgcagc cgcccgaccc cgcgaccgag
      661 cttgggtttc gcgccctcgc ctaccgccag cggcgcttcg cactcgtgct caccttggcc
      721 atgatcgtgc tgtatttcgg cttcattctc ctcatcgcct acaacaagcc gctgctggcg
      781 cggaagctga cgccgggact ctcgctcggc attctgctcg gcgccgccgt catcgtctgc
      841 tcctggctgc tcacctgggt gtacgtccgc tgggctaata cgcactacga cagcgagctc
      901 gaccgccacc gcggctgaga tgcaggctct ccccgtggcg acccggatcg gagagcccaa
      961 ccccgtggcg atgggtttct tctttctgtt catcgctacc acgctggcca ttacctggtg
     1021 ggccgcccgc cgcacccgta ccacagaaca cttctatgcg gccgggcgga cggtcagccc
     1081 gggccagaat ggtgtcgcgc tcgccgggga ctacatgagc gccgcctcct ttctcggcat
     1141 tgcggggctg gtttccacca ccgggttcga cgggctgatc tattccaccg gctggctggt
     1201 gggatggccc gtcgtactgt ttctggtcgc cgagccgctc cggaacctgg ggaagtacac
     1261 cttcgcagac gtggtggcgt cccggctgcg ccagaccccg gtccgggtgg cggccgccct
     1321 cggcactctg gtcacggtcg cgttctatct catcgcgcag atggtcgggg ctggcagcct
     1381 ggtgcggctg atgttcggct tctcctacga aaccgccatc gtgatcgtgg gcatcgcgat
     1441 gatcgcctac gtgctgttcg gtgggatgat cgcaactacc tgggtgcaaa tcgtgaaggc
     1501 ggtgctcctg ctgtgcggcg cagccatcct tgcggggctg gtcttgctgc gcttccactg
     1561 gagtccggcc gctcttttcg cggcggcggc ggagcgctat ggggacgcgg tgctcgcgcc
     1621 cggccggctg gtgagcaagc cactcgatgc ggtgagtctg ggaatcgccc tcatgttcgg
     1681 gacggcggga ctgccccata tcctgatgcg cttctacacg gttcccgacg cgactgcagc
     1741 gcggaaaagc gtgttttacg cgaccgggct gatcggcgcc ttctacctca tgaccttcgt
     1801 gctgggcttc ggggcgatgg tgctggtggg tccggccgcc atcaaggccg tggaaccggg
     1861 cggaaacatg gccgctcccc tgctagcgga gtttctgggc gggacgccct tccttggctt
     1921 catcgctgcc gtggcatttg ccaccattct cgccgtggtg gcggggctca ccctctcagg
     1981 agcggcggcg ctctcgcacg atctctgggt tcacgtggtg cggaaggatc acgccacggc
     2041 aacggagcag ctccgagtag cccgggttgc cacagtaggg ctcggggtcc tgggcgttct
     2101 cctggggatc accttcaagg gacagaatgt ggcgttcatg gtgggtctgg cgttcgcgat
     2161 cgccgccagc gccaacttcc cagccctggt cctctcgatc ttctggcggc gctatacgac
     2221 ggccggcgcg gtcaccagca tggtgacagg gaccgtggga gcgctggtgc tcatttatct
     2281 ctcccccact gttcaggtgg atatcctcaa gcacccgtcc gcctggttct cgctgcgcaa
     2341 tccggctctc gtcaccatgc cgctctcctt tctactgggc gcggcggtgt ccttggctgg
     2401 ccgaagaccc aaggaagccg ccggcttcga tcaactggag cgacgagtcc atctgggttc
     2461 caggccgact tagagatcca gcaccagcct gagtccgttg gcaatcgcgc cgagcacggg
     2521 atcccccacg cgccccggag tctcccgcaa ccagcgccgt tccaaagtca gcggatgagc
     2581 cacattggcc accaggtcgc ggcccaggcg ggagtcgctc acgggtatca gaacgtttcc
     2641 cggtgcttcg gtcagccgga ggttgctgga gagcggcacg acgaccaccg tggggatccg
     2701 gctcgcattg aatgactccg cctggatgac gagtacggga atgcgaggtc ctgatccgga
     2761 ctctacccag cacacgctgc cacgcgagat caccagtgat cctcgcgagg tatgccgcgg
     2821 gactgcagcg cggcgaggct ctgctcgggg cggccttcaa cggtctggta gacgctgttc
     2881 aaccgggcgg tgatctggct tccgtgaagc cgactaaggt actcggcgag cgcttttgca
     2941 tagagctcgc tccgggagat tccgagccgc gtagcggcgg catcggcatc tctgaacaac
     3001 tggtctggca acgagatcgc tgttttcata ccaacagtat aactttggtt ataccaggga
     3061 acaatcgact cgagttctca gtcgattcag ggccatttcg gggggccagc gccagtgccg
     3121 atcctaccgt atcttctcgt ttcgttcgcc agaccggttg gtcctcacct caccccagag
     3181 ctcaccgtgc cgaactccac tcgccgcttc gccgcgctcc tttctgtcac tgggctggtt
     3241 gcattcccgc tcgccctccc ggctcagatg cccggcgccg ataccgctgc attcgggact
     3301 ctggtctggc gaagtctagg gccgcagcgg gg
//
LOCUS       DASYRV010000080         3180 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1054385, whole genome shotgun sequence.
ACCESSION   DASYRV010000080 DASYRV010000000
VERSION     DASYRV010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3180)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3180)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3180
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1054385"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1261)
                     /gene="cysS"
                     /locus_tag="VGQ24_01810"
     CDS             complement(<1..1261)
                     /gene="cysS"
                     /locus_tag="VGQ24_01810"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR00435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEV8453594.1"
                     /translation="MDLRFYNTLSRKVEPFEPLQTGRVSLYTCGPTVYNYAHIGNFRT
                     FLFEDLLRRWLEASGYRVLHIMNLTDVDDRTIAAAREKGVSLRQHVDPFVKAFQEDRD
                     WLRILPAHEEPRATEYIPAMIRLIQGLLEKGIAYRGEDGSVYFSIARFPAYGRLSRLD
                     TRELKTGAGASERVMADEYAKEDARDFALWKAARPEDEAVGAAWDAPFGRGRPGWHIE
                     CSAMALELIRQRFGTEVLDIHAGGVDLIFPHHEDEIAQSCAYTGKDQFARFWLHGEFL
                     GIEGTKMSKRYGNVLTPRDLREEGVPAEAVRLLMFGTHYRKKLDWSDDALAAAREGSH
                     RLGQFQNRLLESRSDSDSPRLIQAAERLGHNMAEALDDDLNAPRALAAMFAFLNEGNA
                     AMDAGEKAGPAVLSAWNKGEKVLGVTSR"
     gene            complement(1261..2196)
                     /locus_tag="VGQ24_01815"
     CDS             complement(1261..2196)
                     /locus_tag="VGQ24_01815"
                     /inference="COORDINATES: protein motif:HMM:NF044972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HEV8453595.1"
                     /translation="MQLLLGSINDIIERLAAILRVDGEAALRAILRVLGIWLLAWLAW
                     RVVRLTAHRIEQAVDDGDDSITTLREKRGRTISQLLRSVGRVVIVTIAILLTFNVFIN
                     IAPILAGAGILGLAISFGAQSLVRDIITGFFILLENQFAVGDVIEVAGKSGVVERMTM
                     RVVVLRDLEGTMHVIPNGEMKVVSNKTRGWARAVVDISVPYTEDVDRILSVVRDEAAQ
                     FSTDSAWGLQLDGPVEVLGVESMTDNSVVIRTLLKTQPGSQWNVAREFRRRLINRFSR
                     EAIESPFQQRRVHVTVKGGANGEAMAQAAAAGAAG"
     gene            complement(2993..>3180)
                     /locus_tag="VGQ24_01820"
     CDS             complement(2993..>3180)
                     /locus_tag="VGQ24_01820"
                     /inference="COORDINATES: protein motif:HMM:NF019375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1611 domain-containing protein"
                     /protein_id="HEV8453596.1"
                     /translation="GISLNTYDMSEDAARRACEAASKETGLPATDPVRFAAAPLLDAI
                     HRGRQAYLTARKGLVTA"
BASE COUNT          604 a         1009 c         1004 g          563 t
ORIGIN      
        1 gcctactcgt cacgccgagc actttctccc ccttattcca agccgataaa acagcgggac
       61 cggctttctc gcccgcgtcc atcgctgcat ttccttcatt caaaaaggcg aacattgccg
      121 ccagggcccg cggcgcgtta aggtcatcgt cgagcgcctc ggccatattg tgacccagcc
      181 gctcggctgc ctggataagc cggggtgagt ccgagtcgga cctggactcg agcagccggt
      241 tctggaactg tcccagccgg tgcgacccct ccctcgccgc agctagagca tcgtcgctcc
      301 agtcaagctt ttttctataa tgggttccga acatcagcag tcggaccgct tcggcaggaa
      361 cgccctcctc ccggagatct cgcggggtaa gcacgttacc gtaccgctta gacatcttcg
      421 tgccttcgat acccaggaat tcaccatgaa gccagaagcg ggcaaactgg tccttgccgg
      481 tgtacgcaca gctctgggcg atctcatcct catgatgcgg gaagatcagg tccacgccgc
      541 cggcgtggat gtcgagcacc tcggtgccga accgctggcg gatgagctcg agcgccatcg
      601 ccgagcactc gatgtgccag ccgggccggc ccctgccaaa aggcgcgtcc cacgccgcgc
      661 cgacggcttc gtcctccggc ctggcagcct tccacagtgc gaagtcccgc gcgtcctcct
      721 tggcgtactc gtcagccatc acgcgttcgc ttgcccctgc cccggttttg agctcccgcg
      781 tatccagccg cgagagccga ccataggcgg gaaacctggc aattgagaag tagaccgacc
      841 cgtcctctcc ccggtacgcg attcccttct ccaagagtcc ctggatgagc cggatcatcg
      901 ccgggatgta ctccgtggcc cggggctcct cgtgggccgg aaggattcga agccagtcgc
      961 ggtcttcctg aaacgctttc acgaagggat cgacgtgctg ccgaaggctg acccccttct
     1021 cgcgagccgc cgcgatggtc cggtcgtcca cgtcagtcag attcattatg tggaggactc
     1081 ggtacccgct cgcctccagc cagcggcgga ggaggtcctc aaagaggaag gtcctgaagt
     1141 tgccgatgtg ggcatagttg tagacggtcg gaccacaggt gtagagcgac actcggcccg
     1201 tttgaagcgg ctcgaagggc tcgaccttcc tactcagagt gttgtagaac ctgaggtcca
     1261 ttagcctgcg gcccccgcgg cagccgcttg tgccatggcc tcgccgttgg cgccgccttt
     1321 gaccgtcacg tgcacccggc gctgctggaa gggactctcg atcgcttccc gggagaagcg
     1381 gttgatcagc cggcgcctga actcacgggc gacgttccac tgtgagccgg gctgagtctt
     1441 gagcagggtt cggatgacca cggagttgtc cgtcatcgac tcgacgccga gcacttcgac
     1501 cgggccatcc agttggaggc cccaggccga gtcggtcgag aactgagccg cctcgtcacg
     1561 caccaccgac aggatgcgat ccacgtcctc ggtgtagggc accgatatgt ccaccaccgc
     1621 gcgagcccac ccccgggtct tattgctgac caccttcatc tcgccgttgg ggatcacatg
     1681 catggtcccc tcgaggtcac ggagcaccac cacccgcatg gtcatgcgct cgaccacccc
     1741 gctcttgcca gcgacctcga tcacatctcc taccgcgaac tgattctcca gcagaatgaa
     1801 gaacccggtg atgatatccc tgaccaggct ctgggccccg aacgagatcg ccaggccgag
     1861 aatgccggca ccggccagga tcggcgcgat gttgatgaac acattgaagg tgagcagaat
     1921 ggcgatggtg acgatgacca cccgccccac gctgcggagc agttgggaaa tagtccggcc
     1981 ccgtttctcc cgcagcgtgg taatggaatc gtcgccatcg tctaccgcct gctcgatgcg
     2041 gtgcgccgtc agccggacga ctcgccaggc aagccacgcc agaagccaga tgccgagcac
     2101 gcggagaatg gcccgcaatg ctgcctcccc atccacccgc aggatggcgg caagacgctc
     2161 gatgatgtca ttgatcgagc cgagcagaag ctgcacgtta actcccggag acagcagaag
     2221 ttggcgagcc cgcccgagcg gcggtcaggg ccctaacgta ggcgccctgg gagcaccacg
     2281 tcaaccggag gaaaggctat tcggttatgg gctatgggct atgggctaga ttcaactggg
     2341 gtggggcaga cggcggaact gggctgagtc ccgggaggct gagcgcaagg ggtgaggcgg
     2401 agggaagtcg gcgcttgaag ccggagggac ttggcccaga gccgccgtcc gaggcggggc
     2461 gggtgcatca tagatgatcc ggctctcttt tacgggaatt ccgcgggtca ggcactcgac
     2521 caggacatgc tctggagttc gccttgaaat tgcgacctgg aaaccagagc tgttaggatg
     2581 agctccggga aatatgtcgt tcagccgctc cagagagggt aagtgcggcg tggccgtgac
     2641 cacctgaagc acgcgccagc caatgacggc ttcggcgtcg agcagcacgg aatgggttcc
     2701 ctcccgcagt acgaccttgt cacagcggct cagcaggtga ccgagatcag gaccgatcag
     2761 caggcggtgg gagcccccgc ctgcggactc atataaatga agagtccgca cggagccgcg
     2821 aacccacgct cccagagtgc cgggttggcg ggcataggcg aggagttggt gaaggggaat
     2881 gtcgtggggg agcgggagcg ggggcccgga gaacatgcgt cagcatgggg taaggagctg
     2941 accgctgtgt aatcaactaa tcgcagcgag ggtgaaattc ccgcagcaac gatcaggcgg
     3001 tgaccaatcc ctttctcgcg gtgagatacg cctgtctgcc ccgatgtatg gcgtcgagca
     3061 ggggagcggc tgcgaagcgg actggatcgg tcgccggcaa tcctgtttcc ttggaggcgg
     3121 cctcgcaggc ccggcgagcc gcgtcctcgg acatatcgta cgtattcagc gagataccga
//
LOCUS       DASYRV010000081         4007 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2923761, whole genome shotgun sequence.
ACCESSION   DASYRV010000081 DASYRV010000000
VERSION     DASYRV010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4007
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2923761"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..1173)
                     /locus_tag="VGQ24_01825"
     CDS             complement(94..1173)
                     /locus_tag="VGQ24_01825"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEV8453597.1"
                     /translation="MPPVRVPDRILVVDDQPSARDAIEAHLRHRGYEVVLASSGEEAL
                     DILARQKIACMLADSRLFATNSGELLSLSFKRDPHLATVVLSAIADVGDAVRYLQYGA
                     MDYLPKPLDLTQLEASVERALRRRAELIQERGASWILKEEVVRLAADLAQERARVEGL
                     AVATLEALVQVTEAQDSWFSGHSQRVGQLAASIAAESGRTDEEVEQVRQAGRLHDIGM
                     ICVPEGLQSKKGSLTPAEFELIKRHPIVGAQILAPLPYLGHVATFVRGHHERWDGKGY
                     PDGLAGESIPWGARLIGAAEIYDALTTARPYREQLTPELAVDRMRELSGTVLAPEVHR
                     ALVRVVERGSALVFVGDEQGREPVL"
     gene            1486..1662
                     /locus_tag="VGQ24_01830"
     CDS             1486..1662
                     /locus_tag="VGQ24_01830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453598.1"
                     /translation="MPKPDDSQATVTLEPSRRRLILERLHCDFYGEAVPSERIATVVL
                     AALRDLDKGPAFPD"
     gene            1685..2479
                     /locus_tag="VGQ24_01835"
     CDS             1685..2479
                     /locus_tag="VGQ24_01835"
                     /inference="COORDINATES: protein motif:HMM:NF014609.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HEV8453599.1"
                     /translation="MSSQRFTQVDAFTNRPFAGNPAAVCLLPSPRDSQWMQHVAQEMN
                     LAETAFLVRRADGFDLRWFTPALEVDLCGHATLASAHVLWEEGHLPTSAPARFHTRSG
                     MLTATRDGEMIWLDFPATPSHPADTPSELRSGIGAAMLYVGRTPFDYLVELESESRVR
                     SLAPDLAALARLGTRGVIVTARSTDPAYDFVSRFFAPGSGIAEDPVTGSAHCGLGPFW
                     AARLGKKELVGYQASSRGGAVRVRLEGDRAHLGGHAVTVLRGELLH"
     gene            2486..2815
                     /locus_tag="VGQ24_01840"
     CDS             2486..2815
                     /locus_tag="VGQ24_01840"
                     /inference="COORDINATES: protein motif:HMM:NF007494.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-binding protein"
                     /protein_id="HEV8453600.1"
                     /translation="MNPLEAFETLDLRVGRILRAEPNERARTPSYKLWIDFGPLEEKT
                     SSAQLATLYRPDELVGRLVIAAINLGDRNIAGFRSEVLVLGVPSAAGEVVLLEVEREV
                     PLGGRVY"
     gene            complement(2892..3302)
                     /locus_tag="VGQ24_01845"
     CDS             complement(2892..3302)
                     /locus_tag="VGQ24_01845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453601.1"
                     /translation="MDIRIWGLAIAMTALACAPQRDRADSEPMQQGRMYTAWLYGNEY
                     SKLWERFSPEMQQTFGSVADLASFASRAVRRLGTERGKVDERVENADPYRVYTRSASF
                     NKSSHRMLIEWSLAKDGAVTGLVVRPAGADSAHQ"
     gene            3354..>4007
                     /locus_tag="VGQ24_01850"
     CDS             3354..>4007
                     /locus_tag="VGQ24_01850"
                     /inference="COORDINATES: protein motif:HMM:NF016816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M55 family metallopeptidase"
                     /protein_id="HEV8453602.1"
                     /translation="MRVYISVDMEGVAGVVHEDQTDPTEPRHSGEYNRFRRLMTNEAN
                     AAIAGALDAGANAVLLNDSHWLMRNLLAEELNPKAELMSGGPKRLSMVEGIDGGFDAA
                     MFIGYHAKAGTTNATIDHTYTSRVYEARINGQPVGELALNAAMAGVHGVPVALVSGDQ
                     ALAAEAKTLLGDPVETVIVKEAVGRFAAKSLAPAVACARIRAGAAAALRRKHVPFTFE
                     "
BASE COUNT          678 a         1302 c         1341 g          686 t
ORIGIN      
        1 ggattcaggc cacaaatgaa ggcgccctga ctagatttta gaaggtatgc gagctagaat
       61 cggcctgaga cggccagagt tgtcggcaag atgctagagc acaggctccc tgccctgctc
      121 atcacccacg aataccaggg cactgccccg ctcaacgacc ctcacaagag cccggtggac
      181 ctctggcgcc agtaccgtgc cgctgagctc ccgcatccga tcaacggcca gttcgggggt
      241 cagctgctcc cgatacggtc gagcggtggt gagcgcgtcg tagatctcgg cagccccaat
      301 cagtcgggct ccccagggga tcgattcgcc ggccaggccg tcggggtacc ccttaccatc
      361 ccagcgctcg tggtggccgc ggacgaaggt ggccacgtgc cccaggtacg gcagtggcgc
      421 caggatctgg gcgccgacga tggggtgtcg cttgatgagc tcgaactctg ccggcgtgag
      481 ggagcccttc ttggactgga gcccctcggg aacgcagatc atcccaatgt cgtggaggcg
      541 gcccgcctgg cgcacctgct ccacttcttc gtcggtccgg ccgctttccg ccgcgatcga
      601 ggcggcgagc tgacccaccc tctgggaatg gccggagaac caggaatcct gcgcctcagt
      661 gacctggact agcgcctcga gagtggccac cgcgagccct tcgaccctgg cgcgctcctg
      721 cgctagatcc gcggcgagtc tcacgacttc ttccttgagg atccaggaag ccccccgctc
      781 ctggatcagc tcggcgcgcc gccggagcgc ccgctctacc gaggcctcga gctgggtgag
      841 atcgagaggc ttcgggagat agtccatcgc gccgtactgg aggtaccgga cggcgtcgcc
      901 gacatcggcg atcgcgctca gcaccaccgt ggcgagatgg ggatcgcgct tgaacgacag
      961 cgagaggagc tcgccgctgt tggtggcaaa cagccgggaa tcggccagca tgcaggcgat
     1021 cttctgccgc gcgaggatgt ccagtgcctc ctcgccggag cttgccagca ccacctcgta
     1081 tccacgatgc ctgagatgcg cttcgatggc gtcacgagcc gacggctgat cgtcgacgac
     1141 caggatacga tcgggcactc ggaccggcgg catggatctc cttttgggaa cctggtggcc
     1201 ctgaggcggg ggaattgaag tacgagagaa ggatcggatc gagcgggtat ttcttgagtt
     1261 gcgccgtggc agcagacact gggggctggc cggcttcgtg acgactggtt actatccgat
     1321 caggacaggt cgatcggcag caatacaacg cctctgcaga tgagtcgccc acgcgccgcg
     1381 taaagctttg gctgccatgg gccgaaaact cactggcaga atcaccacct gacgggttgc
     1441 cccatacgcg ccggcgtcgc gcgcccgagt tcggagagga cgagcgtgcc gaaacccgat
     1501 gactcccaag ctaccgtaac tctcgagccc agccggcgtc ggctgatcct cgagcggctg
     1561 cactgcgact tctacggtga ggccgtccca tcggagcgga tcgccacggt cgtgctggcg
     1621 gcgctacgcg acctcgacaa aggtcctgcc ttccccgatt gatcgagccc gacgccatcc
     1681 ggccgtgagc tcgcagcgat tcacccaggt agacgctttc accaaccgcc cgttcgccgg
     1741 caaccctgca gcggtgtgcc tgctcccttc cccgcgcgat tcccagtgga tgcagcatgt
     1801 ggcccaggag atgaatctgg ccgagaccgc ctttctggta cggcgggccg acgggttcga
     1861 cctccgctgg ttcacgccgg cgctcgaggt ggatctctgc ggccacgcga cactcgcgag
     1921 cgcgcatgtg ctttgggaag aggggcacct acccacctcg gcacccgcgc ggttccacac
     1981 ccgaagcggc atgctcaccg ccacacgcga cggcgagatg atctggctcg actttcccgc
     2041 cacgccgagt catccggccg atacgccgtc cgagctgcgc agtggaatag gggcggcgat
     2101 gttgtatgta ggccgtaccc cgttcgacta cctggtggag ctcgagtccg agtctcgcgt
     2161 gcgctcgctc gcgcccgatc tggccgcgct ggcccggctg ggcacccgcg gagtcatcgt
     2221 caccgcccgc tccaccgatc ccgcctacga cttcgtctcc cggttcttcg ccccgggctc
     2281 cggcatcgcg gaggacccgg tcaccggctc ggcgcattgt ggcctcggtc cgttctgggc
     2341 agcccgcctg ggcaagaagg agctggtcgg atatcaggcg tcgtcgcggg gtggcgccgt
     2401 ccgggtacgt ctcgagggcg atcgggctca tctcggcggt cacgcggtaa ccgtgctccg
     2461 cggcgagctg ctgcactgac cgcagatgaa tccgctcgag gcgttcgaga ccctcgatct
     2521 ccgggtcggc cggattcttc gggccgagcc gaacgagcgc gcccggacgc cgtcgtacaa
     2581 gctgtggatc gacttcgggc cgctggagga gaagacctcg agcgcgcagc tggctacgct
     2641 ctatcggccg gacgagctgg ttgggcgcct ggtgatcgcg gcgatcaatc tgggagaccg
     2701 gaacatcgcc ggcttcaggt ccgaggtcct ggtgcttggg gtgccgagcg cggcgggaga
     2761 ggtggtcctg ctagaggtgg agcgcgaagt gccgctgggc ggtcgggtgt actgaagtgg
     2821 gtgagaggta agaggtgaga ggtaagaggg gtcagatgac gcgcaccctc tcacctctca
     2881 cttctcactt ctcactgatg ggcggaatcc gcgcccgccg gccggacaac caggcccgtc
     2941 accgcgccat ccttggcgag gctccactcg atcaacatgc ggtggctcga cttattgaag
     3001 gatgcgctgc gggtatagac ccggtacgga tcggcatttt ccacccgctc gtccaccttg
     3061 ccgcgctcgg tgccgagccg gcgcacggcg cggctggcga agctggcgag gtccgcgacg
     3121 ctgccgaagg tctgctgcat ctcgggggag aaccgctccc agagcttgct gtattcattg
     3181 ccgtacagcc atgccgtata cattcgaccc tgttgcatcg gctcgctgtc ggcccggtcc
     3241 cgttggggcg cgcaggcgag cgccgtcatc gcgatcgcca gtccccagat gcgtatatcc
     3301 atcaccgtcc tcggtattgt cttcgcgccg aacatcctac cactggagtc gtcatgaggg
     3361 tctacatctc ggtcgatatg gaaggtgtcg caggggtcgt gcacgaagat cagaccgacc
     3421 cgaccgagcc ccgccactcc ggagagtata acaggtttcg ccggctgatg acgaacgaag
     3481 cgaacgctgc aattgccggc gcgctcgacg ccggtgcaaa cgctgtcctc ctgaacgata
     3541 gccactggct gatgcggaat ctgttggcgg aagagctcaa cccgaaggcg gagctcatga
     3601 gcggcgggcc gaagcggttg tcgatggtcg agggcatcga cggcggcttc gacgcggcca
     3661 tgttcatcgg ctatcatgca aaggcaggga ccacgaacgc caccatcgac cacacttata
     3721 ccagccgggt ctacgaggcc cggatcaacg ggcaaccggt gggagagctc gcgctgaacg
     3781 cggcaatggc gggggtgcac ggcgtcccgg tggcgctggt gagtggcgac caggcgctcg
     3841 cggcggaggc gaagacgtta cttggcgacc ctgttgagac agtaatcgtc aaggaggcgg
     3901 taggacgatt cgcagcgaag agtctcgcgc cggcggttgc ctgcgcgcgg atccgggccg
     3961 gagcggcggc ggcgctcagg cggaagcacg tgccgttcac gttcgag
//
LOCUS       DASYRV010000082         3802 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1484471, whole genome shotgun sequence.
ACCESSION   DASYRV010000082 DASYRV010000000
VERSION     DASYRV010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3802
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1484471"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            7..111
                     /locus_tag="VGQ24_01855"
     CDS             7..111
                     /locus_tag="VGQ24_01855"
                     /inference="COORDINATES: protein motif:HMM:NF033488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HEV8453603.1"
                     /translation="MVSGYTIGGFIHLLLLIALAVVLIRVIQGRRPVV"
     gene            404..772
                     /locus_tag="VGQ24_01860"
     CDS             404..772
                     /locus_tag="VGQ24_01860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453604.1"
                     /translation="MKKDDELEISLNPHRLEERAAASLETAGRLHSRGIEVTGHEDSE
                     DLADLLAAVEGFEEWVEARGGDLMVDDLNSSQPDDPRFVVPERAPGENLRSYIGRIEA
                     ATARLRDHPSLPGEAPSVEA"
     gene            complement(776..1783)
                     /locus_tag="VGQ24_01865"
     CDS             complement(776..1783)
                     /locus_tag="VGQ24_01865"
                     /inference="COORDINATES: protein motif:HMM:NF027219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative zinc-binding metallopeptidase"
                     /protein_id="HEV8453605.1"
                     /translation="MPTRKRRRVEVPSVDVRCVCGYPLQRFWNFCPDCARPQRWPDTT
                     GLAGAECPRCRWMASPKFSFCPWCALDLSDEGTFSEEPLKAPKGFRMDARCDWGCGGG
                     VQYPMPYCPWCGKDQHWNEEEKFEGSCPHCARGVDDWMDICPWCGRDATGQDLIRQAL
                     SRVRGLLRVARISDWGYRVLLRPGVSGVDPKYPKVVEIEERYVVGVRRRDEIPWPMLV
                     GLISHELGHSFLYHNWHWTRAAQFRRAFGEVAKAYRVLDDAWVDFQRRGVAIAPVNHV
                     SGYATRHPQEDFAETFRFYLTRRGKLRELFAEFGRKRKGVIVYEKFLALHDYVRSLRG
                     R"
     gene            complement(1770..2807)
                     /locus_tag="VGQ24_01870"
     CDS             complement(1770..2807)
                     /locus_tag="VGQ24_01870"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEV8453606.1"
                     /translation="MRIAVVFDTPYKSWTPEDQHRQMLAELAGGVQPEPEMEYQVGGA
                     LEENGHEVLLIGIHADPREILDRCAEWRPELVMNCVEAFRNDDHLDYLIPALLEAGGY
                     HYTGSPPLGLLVSRDKAMSKKILAFHGIQVPGFITYRQNEEVASAPELRLPLIVKPLS
                     ADASAGIAQASVVEDLDALRERVAFIHRQFEQPAIAEEFIPGRELYASVIGNEETLEI
                     LPLTELIFDKEKTEPEERIATQSAKWDEPYRKRKGIKNVFARPVSAVARERIDAICRT
                     AFRALWLRDYARIDLRLTEEGEIWVLEANANPFISRGHEIANAADKAGMPYPKFIQRI
                     VDEATARYAHA"
     gene            complement(2817..3308)
                     /locus_tag="VGQ24_01875"
     CDS             complement(2817..3308)
                     /locus_tag="VGQ24_01875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453607.1"
                     /translation="MTEPSYSYNRRSAAQDGMVLAVREHLKSLLANIPTPFPCHFACF
                     IHPRRRAGEHGFGAITLAGESLPLTVMLLESLRRMPTLLEGTDPVVVGAADEEDALVP
                     GTPRAEWHEPLPVTRIMLWHGVDHGAGAGNLRNRTGIMLTPQAAGPQLILLCAERPVG
                     WPA"
     gene            complement(3314..>3802)
                     /locus_tag="VGQ24_01880"
     CDS             complement(3314..>3802)
                     /locus_tag="VGQ24_01880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453608.1"
                     /translation="DTEGRPYFDLFGTNKIGTIDPKTMELKEYALPDAQSRPRRIART
                     SDGHLWYVDYTRGYLGRLDPKSGEVKEWQNPSGRTSLPYAMTVDDANRLWFVETGVQP
                     NRLVGFDPKTERFFSNTPIPSGGGTVRYMIFDPKTRSIWFGSDNDTIGRVTVPPARAT
                     TT"
BASE COUNT          645 a         1210 c         1279 g          668 t
ORIGIN      
        1 ctcggcatgg taagtggtta cacgatcggc ggattcatcc accttctgtt gctgatcgcg
       61 ctcgccgtgg tcttgattcg agtcattcag ggccgaaggc cggtcgtgta gcgcagcagg
      121 tgaagctcgt cggggatcgg ctcggtttgg tggagtagca agcggccgag cggatcctga
      181 tccccctatc gttggagggc tggggctgtc gggtgagggg ttctggtgcc ctccagccat
      241 ggggcgggtc ggctctcagt gagctgaagc ggtaccagat ggactctgag gtggttcggg
      301 aaagcgcact gcgcctgtcc cgaggccacc tctttgagtt tccctggttg ccgtgtcagt
      361 tctgctcggc gccgcacgtc accacggagg ggaggatgcc gctatgaaaa aggatgacga
      421 gctcgagatc agcttgaacc cgcatcgttt ggaggagcgt gctgccgcat cgctggaaac
      481 agcggggcgg ctccacagcc gaggcatcga ggtgactggc cacgaggact ccgaggatct
      541 ggcggacttg ctcgccgcgg tcgaggggtt cgaagaatgg gtcgaggccc gcggcgggga
      601 cctgatggta gatgacctga acagctccca gccagacgac ccgcgcttcg tggtgccgga
      661 gcgggcgccg ggtgagaacc tgcggagcta catcgggcgg atcgaggccg ctaccgctcg
      721 gttgcgggac caccccagcc tcccgggtga ggcgccgagc gtggaggcct gagcttcagc
      781 ggccccggag agaccgcaca tagtcgtgca gcgccaggaa cttctcgtac acgatcacgc
      841 ctttgcgctt gcggccgaat tccgcgaaga gctcgcgtag cttgccccgc cgagtcaggt
      901 aaaagcggaa ggtctcggca aaatcctcct gcgggtgacg ggtggcgtag ccgctcacgt
      961 ggttgaccgg agcgatggcc acaccgcgcc gctggaaatc cacccaggcg tcgtcgagca
     1021 cgcggtacgc cttggccact tcgccgaagg cgcggcggaa ctgggcggca cgcgtccagt
     1081 gccagttatg gtagaggaag ctgtgcccga gctcgtgact gatcagtccg accagcatgg
     1141 gccaggggat ttcgtcccgc cgccttacgc cgacgacgta gcgctcttcg atctccacga
     1201 ccttggggta tttgggatct acgcccgaga ctccgggtcg tagcaggacc cgatagcccc
     1261 aatccgagat ccgcgcgact cgcagcagac cccgcacccg gctcagtgcc tgccgaatga
     1321 gatcctgtcc ggtggcatca cgtccgcacc agggacagat atccatccag tcgtccacgc
     1381 cgcgagcgca atgcgggcag ctcccttcga atttttcctc ctcgttccaa tgctggtcct
     1441 tgccgcacca ggggcagtag ggcatgggat actggacccc acccccgcac ccccaatcgc
     1501 agcgtgcgtc catccggaag cccttgggcg ccttgagcgg ttcctcgctg aaggtgccct
     1561 catcggaaag atcgagcgcg caccaggggc agaaggagaa tttgggcgaa gccatccagc
     1621 ggcagcgcgg gcactccgcg cccgcgagcc cggtcgtgtc gggccagcgc tgcggccgcg
     1681 cgcaatcagg gcagaaattc cagaaacgct gcaaggggta gccgcacaca cagcggacgt
     1741 cgaccgaggg gacctcgacc cggcgccgct tacgcgtggg catagcgggc cgtcgcttcg
     1801 tccacgatgc gctggatgaa cttggggtag ggcatgccgg ccttatcggc ggcgttggcg
     1861 atctcgtgtc cgcggctgat gaaaggattg gcgttggcct cgaggaccca gatctcgccc
     1921 tcctcggtca gccggaggtc gatccgcgca tagtcccgga gccagagcgc ccgaaacgcg
     1981 gtacggcaga tcgcatcgat gcgttcgcgc gccacggcgg agaccggtcg tgcgaagacg
     2041 ttcttgatgc ccttgcgctt gcgatagggc tcgtcccact tggccgactg cgtggcgatc
     2101 cgctcctccg gctcggtctt ctccttgtcg aagatcagct cggtgagcgg caggatctca
     2161 agcgtctcct cgttcccgat cacactcgcg tagagctcac ggcccgggat gaactcttcc
     2221 gcgatggcgg gttgctcgaa ttgacggtga atgaaggcta cccgctcgcg cagcgcgtcc
     2281 aggtcctcca ccaccgaagc ctgggcgatc ccggccgaag cgtcggcgga cagcggtttc
     2341 acgatgaggg gaaggcgcag ctccggcgcg ctggcgactt cctcattctg ccggtaggtg
     2401 atgaagccgg gcacctgaat gccgtggaag gcgaggatct tcttgctcat cgccttgtcg
     2461 cggcttacca gcaatcccag gggaggcgag ccggtgtagt gatagccccc cgcttcgagc
     2521 agcgcgggaa tgaggtagtc gagatgatcg tcattgcgga aggcctcgac gcagttcatc
     2581 acgagctcgg ggcgccactc cgcgcaacga tccaggatct cccggggatc ggcatgaatt
     2641 ccgatcagca gaacttcgtg gccgttctcc tcgagcgccc cgccgacctg gtactccatc
     2701 tccggctcgg gctggacgcc gccagccagc tcggccagca tctgccggtg ctgatcctcc
     2761 ggggtccagc tcttgtaggg ggtatcgaaa acgacggcga tgcgcactgg ctgggcttag
     2821 gccggccagc cgacagggcg ctccgcgcag agcaagatga gttgcggtcc ggcggcctgc
     2881 ggcgtcagca tgatgccggt acggttccgg agattcccgg cgccggcacc gtgatccaca
     2941 ccgtgccaga gcatgatccg ggtcaccgga agcggctcat gccactcggc tcggggagtc
     3001 ccgggcacca gggcatcctc ttcatccgcc gcaccaacca cgacgggatc ggtgccctcg
     3061 agcagcgtcg gcatccggcg caagctctcc agcagcatca cggtgagcgg caggctctcc
     3121 ccggcgagcg tgatcgctcc gaagccgtgc tcccctgccc gccgccgagg atgaatgaag
     3181 caggcgaagt gacaggggaa cggcgtggga atgttcgcga gcaggctctt caagtgctcg
     3241 cgcacggcca gcaccatccc atcctgcgcg gccgagcgcc tgttgtagga gtaggaaggc
     3301 tccgtcacaa gacctacgtc gtggtcgccc gggccggcgg cacggtcacc cttccaatgg
     3361 tgtcgttgtc gctcccgaac cagatcgaac gggtcttggg atcgaagatc atgtagcgca
     3421 ccgtcccgcc accgctgggg atcggggtat tactgaagaa tcgctcggtc ttgggatcga
     3481 acccgaccag gcggttgggc tgcaccccgg tttccacgaa ccagagccgg ttggcatcat
     3541 ccaccgtcat cgcgtagggc agggaggtcc tgccgctggg gttctgccac tccttgacct
     3601 caccgctctt ggggtcgagc cggccgaggt agccgcgggt atagtccacg taccagaggt
     3661 ggccatccga ggtccgggcg atccggcgtg ggcggctctg ggcatcggga agcgcatact
     3721 ccttgagctc catcgtcttc ggatcgatgg tcccgatctt gttggtgccg aagagatcga
     3781 agtaggggcg tccctcggtg tc
//
LOCUS       DASYRV010000083         3221 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_32238, whole genome shotgun sequence.
ACCESSION   DASYRV010000083 DASYRV010000000
VERSION     DASYRV010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3221
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32238"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2540)
                     /locus_tag="VGQ24_01885"
     CDS             complement(<1..2540)
                     /locus_tag="VGQ24_01885"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEV8453609.1"
                     /translation="MADEPKSAIDRRRFLTVLGASGGGALALSGCSTDRVEKLIPYLV
                     QSEDQIPGVATWYASSCTECPTGCGLHVRTREGRAVKLEGNPEHPINQGKLCSRGQAA
                     LQGLYNPGRLKGPMAREADGSWRELTWDDAVARLAAKLGTAGNRVAAISGAGRGTFSD
                     LLTDWVGALGGRVVRYQPFASEPLRAANRRVFGVDQLAGYDFAKAKYILSFGADFLET
                     WPGAMEHQRGFAKSHGFSGGDVAKFVYVAPRMNLTGLNADQWHSIRPGSEAPLALAMA
                     NVLLAGRSGNPGLLTALSDFTPQLAAQETGLPAATIERLAREFGAARPSLAVAGGIGS
                     QHAGATEVCAAVNILNFVAGNIGETVHFGWDIDTPDGYGALGTLLAAMDAGEVAVLLV
                     HEANPAYALPRTSRFADRLRKVAYKVSTSMYLDETAALCDLLLPQHHALERWDDLRPR
                     AGVYSLMQPVMEPVFNTLPAGDVLLRTAKKLGGPLAKFTAPSYQAHLQSRWQALATER
                     REGNFAEFWHGAVQRGGLFIETGAVPPVRLAPGAARIAYTKPKFDGDGELVFLPYPHG
                     NLYDGRGANKPWLLENADPVTKITWHSWVEVNPETARKMDLKDGDVLRLSSPHGSIEA
                     PVYVYPGMSSDVVAMPLGFGHTEYGAYAKGRGENALDLIAAPRGDFLPYVSTRVTIAR
                     TREHRKLASIAGVPRQLGRGIAEAVSLEAARKGLTIEQAYLAEGLGKHAVNPEQELEA
                     LKGWSESQEQATRYGNYQGDHPRWGMAIDLAKCTGCQACVTACYAENNIPTVGESEIY
                     KGREMTWIRIERYWEGGEEPKESVAARFIPMLCQHCSNAPCEPVCPVYA"
     gene            complement(2637..>3221)
                     /locus_tag="VGQ24_01890"
     CDS             complement(2637..>3221)
                     /locus_tag="VGQ24_01890"
                     /inference="COORDINATES: protein motif:HMM:NF014176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEV8453610.1"
                     /translation="LAFVVGGVAAGGVAAYAAFGGNPPLAQQASSSADSITAPIIAAS
                     DSGRLRGPRQPIFFRHDIHAGQYKMQCQYCHYSVAVSPEPGIPSVQTCMGCHLVIGGR
                     DSSHQAEIKKLRQAWAEKKPVEWVRVHYLPRHAHFPHQRHIKALGPNACATCHGDVQR
                     MPQVFKVNNVDRMGFCVTCHVERKVSRDCSVCHY"
BASE COUNT          517 a         1077 c         1058 g          569 t
ORIGIN      
        1 gcgtacaccg ggcataccgg ctcgcagggt gcgttgctgc agtgctggca cagcatcgga
       61 atgaagcgcg ccgccactga ctccttgggc tcctctcccc cctcccagta gcgctcgatc
      121 cggatccacg tcatctcgcg tcccttgtag atctcgctct caccgacggt ggggatgttg
      181 ttttccgcgt agcacgccgt tacacacgcc tggcagccgg tgcacttcgc cagatcgatc
      241 gccatgcccc accggggatg gtccccctga tagttgccgt acctggtggc ctgctcctgg
      301 ctctcgctcc agcctttcag ggcctcgagc tcctgctcgg ggttcaccgc atgcttgccg
      361 agcccctcgg cgaggtaagc ctgctcgatc gtcaggccct tgcgcgctgc ttccagtgaa
      421 acggcttcgg cgatcccccg gccgagctgc cggggcactc cggcaatcga cgccagcttc
      481 cgatgctccc gtgtcctggc gatggtgacc cgggtcgaga cgtagggcag gaagtctccc
      541 cgtggggccg cgatcaggtc gagcgcgttt tctcccctgc ccttggcgta ggcgccgtac
      601 tcggtgtggc cgaatccaag tggcatggcc actacgtccg aactcatgcc gggatagacg
      661 tagaccggcg cttcgatgct gccgtgaggc gagctgagcc gcagcacatc gccgtccttc
      721 agatccatct tccgcgcggt ctcgggattc acctccaccc acgagtgcca ggtgatcttg
      781 gtgacggggt cggcattctc gagcaaccag ggtttattcg ccccgcggcc gtcatacagg
      841 ttcccgtggg gatagggaag gaatacgagc tccccatcgc cgtcgaattt cggcttggtg
      901 tacgcaatcc gggcggcgcc cggtgccagc cttaccggcg gcacggcgcc ggtctcgatg
      961 aagagaccgc ctcgctggac ggcgccatgc cagaactcgg caaagttgcc ctcccgccgt
     1021 tccgttgcca gcgcctgcca gcgggactgg agatgcgcct ggtacgaggg agcggtgaac
     1081 ttcgccagtg ggccacccag cttctttgcc gtgcggagga gcacgtcgcc ggccggcagc
     1141 gtgttgaaca ccggctccat caccggctgc atcaggctat acacgccggc ccggggccgc
     1201 aggtcgtccc accgctccag ggcgtggtgc tgaggcagca ggagatcgca caaggcggca
     1261 gtctcatcca ggtacatcga ggtcgagacc ttgtaggcca ccttgcgcag ccggtcggca
     1321 aatcggctcg tcctggggag ggcgtatgcc ggattggcct cgtgcaccag cagcactgcc
     1381 acctcaccgg catccatcgc ggccagcaaa gtccccaacg cgccgtatcc gtccggggta
     1441 tcgatgtccc agccgaaatg gaccgtttcg ccgatgttcc ccgcgacgaa gttcaggatg
     1501 ttcaccgcgg cgcagacctc ggtggccccc gcgtgctggc tgccgatgcc gcccgcgacc
     1561 gcgaggctcg ggcgggccgc gccaaattcc cgggcgagcc gctcgatggt ggcagccgga
     1621 aggccggtct cctgggctgc cagctgtgga gtgaagtcac tgagagcggt cagcagcccc
     1681 gggtttccac tccggcccgc cagcaggacg ttggccatcg cgagcgccag gggggcctcg
     1741 gagccggggc gaatggagtg ccactgatcg gcgttgagcc cggtgagatt catccgggga
     1801 gcgacataga cgaacttggc gacgtcgcct ccggagaacc cgtgcgattt ggcgaacccg
     1861 cgctggtgct ccatggcccc gggccaggtc tcgaggaaat cggctccgaa cgagaggatg
     1921 tacttggcct tggcgaagtc gtagccggcc agctggtcca caccaaacac ccgtcggttg
     1981 gccgcgcgga gcggctccga ggcgaacggc tgatagcgga ccacccgtcc tcccagcgcg
     2041 ccgacccagt cggtgagcag atcggagaag gttcctcgtc ccgcgccgga gatcgccgcg
     2101 acccggttgc cggccgtccc cagctttgcc gccagcctgg caacggcgtc gtcccaggtg
     2161 agctcccgcc agctgccatc ggcctcgcgc gccatcggtc ccttcagccg gcccggatta
     2221 tagaggccct ggagcgccgc ttgtccccgg gagcagagct tgccctgatt gatcgggtgc
     2281 tctgggtttc cctcgagctt gactgcgcgt ccttcgcggg tgcgcacatg tagaccgcat
     2341 ccggtcggac actcggtaca gctgctcgcg taccaggttg ccacaccggg gatctgatcc
     2401 tccgactgga ccaggtaggg gatcagcttc tcgacccggt ccgtggagca gccggagagc
     2461 gccagcgccc cgcctccgga tgcaccgagc acggtgagga accggcgacg gtcgattgcg
     2521 gacttgggtt cgtcagccat gtcgagtccc tgatttgtca tcctgagcga agcgaaggat
     2581 ctctgcgcct tctgagggat ccttcgctgc gctcaggatg accgcgctgc gcgcggtcag
     2641 tagtgacata ccgagcaatc ccgcgacacc ttccgctcga cgtgacaggt gacgcaaaaa
     2701 cccatccggt cgacgttgtt caccttgaag acctggggca tccgttgcac atcgccgtgg
     2761 caggtggcgc acgcattcgg accgagggcc ttgatgtgac gctggtgagg gaagtgagcg
     2821 tgccgcggga gatagtgcac ccgtacccat tcgacgggct tcttctcggc ccaggcctgc
     2881 cgcagcttct tgatctccgc ctggtgagag ctgtcccgcc ctccgataac cagatggcac
     2941 cccatgcagg tctggaccga agggatgccc ggttcgggcg atactgccac cgagtaatgg
     3001 cagtactggc actgcatctt gtactgcccg gcgtggatat cgtggcgaaa gaagatcggc
     3061 tggcggggtc cgcgcaggcg accgctatca gaggcggcga tgatgggagc ggtgatggag
     3121 tcggcgctgg acgaggcttg ttgcgcgaga ggaggatttc caccgaaggc ggcgtaggca
     3181 gcgacgcctc cggccgcaac gccaccgacg acgaatgcca a
//
LOCUS       DASYRV010000084         3283 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2301672, whole genome shotgun sequence.
ACCESSION   DASYRV010000084 DASYRV010000000
VERSION     DASYRV010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3283
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2301672"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..467
                     /locus_tag="VGQ24_01895"
     CDS             <1..467
                     /locus_tag="VGQ24_01895"
                     /inference="COORDINATES: protein motif:HMM:NF012360.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453611.1"
                     /translation="SDRTGHHRIPHVGGCILGDEVEVGSHSCIDRGSIDDTVVGRGTK
                     IDNLVQVGHNVHIGERCLIMAGVGIAGSTRIGNDVILAGHVGVTDHLVIGDRARIAAK
                     SAIFGDVPPGASFSGHPARPHRQFLRAQAAMYRLAPIVDELERLVPERIRHG"
     gene            460..1731
                     /gene="lpxC"
                     /locus_tag="VGQ24_01900"
     CDS             460..1731
                     /gene="lpxC"
                     /locus_tag="VGQ24_01900"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: protein motif:HMM:NF015299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEV8453612.1"
                     /translation="MARRTLAQSACVSGIGLHSGTFVSAVCHTAPAGQGIVFRRTDLP
                     GAPVIPARLGEVQSTERRTALGHGESGVQTVEHVLAVAAALQIDDLTIDLDGPEPPIG
                     DGSFAPYLAALEQAGVKEQAGEPVTYRVTAASELTEGDSSYVVAPAKSLRLTTTIEWN
                     HPLIGRQTGSYDISPEGFARELAAARTFGFLREADALRARGLALGAAMESTLILSEDG
                     LVGGTLRWPDEFVRHKAGDILGDLALIGGRVEAHIVATRPSHQGNIALARWLTRTGHR
                     HGGAVMDIGRILDVIPHRYPFLLVDRIIEVEGTKRIVGIKNVTINEPFFQGHFPGHPI
                     MPGVLIIEAMAQVGGMLLLGTIEDPDQKVVYFMSLDNVKFRRPVLPGDQLRCELEMLQ
                     NRGRTCRMKGIAYVDGQVVAEAEMMARVVDR"
     gene            1728..2504
                     /gene="lpxA"
                     /locus_tag="VGQ24_01905"
     CDS             1728..2504
                     /gene="lpxA"
                     /locus_tag="VGQ24_01905"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HEV8453613.1"
                     /translation="MSAAIHPTAMVDPRAEIGVGVRIGPYAIVGPQVTVGDRCRIGPR
                     ATLQQNVLLAEGVSVGDGSILGGDPQDLKYDGEETWVEIGAGTIIREYSTINRATAAT
                     VKTTVGARCFIMTYVHLAHDCHVGDDVVIANATQCAGHVTIHDRAILSGLNAVHQFVT
                     IGTYAFVGGGSRVNQDIPPYVKAVGNPMELYGLNSIGLQRAGFPGDTIAALKRAYRLF
                     FNSDLNLSQALERARADLPPLPEVERFLAFVESSERGVPA"
     gene            2501..>3283
                     /locus_tag="VGQ24_01910"
     CDS             2501..>3283
                     /locus_tag="VGQ24_01910"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEV8453614.1"
                     /translation="MSPRLPVGVIGVGALGQHHARHLAGLDEVRLVGVYDCDTARATQ
                     VANGLATTAFTEMDDLLRRVEAVTVAVPTPAHAEVGIRALDLGVPVLMEKPLAVTLAE
                     ADNLIASARRRQVQLQVGHIERYNRALRAAEPFLDGPRYIESLRLAPFQPRGTDVAVV
                     LDLMIHDLDLVLHLTGSSATEVRASGLPVLSSHLDLANARVEFANGAVALATASRVAR
                     ERIRRLRLFQPNGYFSLDLASGGGEFMRVRSGWQPGTGRDLAD"
BASE COUNT          528 a         1080 c         1116 g          559 t
ORIGIN      
        1 tgtccgaccg gaccgggcac caccggattc ctcatgtagg cggctgcatc ctcggggatg
       61 aggtcgaggt cggctcgcat tcctgcatcg accgcggcag catcgatgat acggtcgtgg
      121 ggcgggggac caagatcgac aatctggtgc aggtagggca caacgtgcat atcggagagc
      181 gctgcctgat catggcgggc gtcggtatcg ccggaagcac ccggatcggc aacgatgtga
      241 tcctcgccgg acatgtgggc gtcaccgacc atctggtgat cggtgatcgt gcgcgcatcg
      301 ccgccaagag cgccatcttc ggtgacgtgc cccccggcgc ctcgttcagc ggccatcctg
      361 cgcggcccca ccgtcaattc ctccgggccc aggccgccat gtaccggctg gcgcccatcg
      421 tcgatgagct ggagcggctt gtgccggagc ggatccgcca tggctaggcg gaccctggcc
      481 cagagcgcct gcgtaagcgg gatcgggctg cacagcggta ccttcgtgtc ggccgtgtgc
      541 cataccgctc ccgccgggca ggggatcgtt tttcgcagga ccgacctgcc gggcgctcca
      601 gtcattccgg cgcggctggg cgaggtgcag tcgaccgagc gtcgaacggc gctgggacac
      661 ggggaaagcg gggtccagac ggtcgagcat gtgctcgccg tggcggccgc cctccagatc
      721 gacgatctca ccatcgatct cgacggcccc gagccgccga tcggggacgg gtccttcgcc
      781 ccgtacctgg cagcgcttga acaggccggc gtcaaggagc aggcgggcga gccggtgact
      841 taccgggtga cggcggcgtc cgaactgacg gagggtgatt cctcctacgt cgtagccccg
      901 gccaagtcac tccggctgac cacgacgatc gagtggaatc atcctctcat cggccgacag
      961 actggttcct acgatatcag ccccgagggg tttgcccggg agctggccgc ggcccgcacc
     1021 ttcgggtttc tgcgtgaggc cgacgcgctc cgggcccggg gtctggccct gggggcggcc
     1081 atggaatcca ccctcatcct ctctgaggac gggctcgtcg gggggacgct tcgttggccc
     1141 gacgagttcg tgcgccacaa ggcaggggac atcctgggag atctggcctt gatcggcggg
     1201 cgggtggagg cccacatcgt cgccaccagg ccgagccacc agggtaatat tgcgttggcc
     1261 cgctggctta cccgtaccgg acaccgccac ggaggcgccg tgatggacat cggccggatc
     1321 ctggacgtca tcccccatcg ttatccgttt ctgctggtcg accggatcat cgaggtcgag
     1381 gggaccaagc gcatcgtcgg gatcaagaac gtgacgatta atgagccgtt cttccaggga
     1441 catttccccg gtcatccgat catgccgggt gtgctgatca tcgaggcgat ggctcaggtc
     1501 ggtggcatgc tgctcctcgg cacgatcgag gatcccgacc agaaggtggt ctacttcatg
     1561 tcgctcgaca acgtgaaatt ccgccggcca gtgctcccgg gagaccaact gcgctgcgag
     1621 ctggagatgc tgcagaaccg cggcaggacc tgccggatga agggcatagc ctacgtagac
     1681 ggccaggtgg tggcggaagc ggagatgatg gcgcgcgtgg tggatcggtg agcgcggcga
     1741 ttcaccccac cgcaatggtg gatccccggg ccgagatcgg cgtgggagtg agaatcggac
     1801 cctacgcgat cgtggggccg caggtcaccg tcggcgaccg atgccgcatc ggcccgcgtg
     1861 ccaccctgca gcagaacgtg ctgttggcgg agggcgtatc cgtcggggac gggtcgatcc
     1921 tgggtggaga cccgcaggac ctcaagtacg acggcgagga aacctgggtc gagatcgggg
     1981 ccggcacgat catccgcgag tattccacga tcaatcgcgc caccgcggca accgtcaaga
     2041 ccacggtcgg cgcccgttgc ttcatcatga cctatgtgca cctcgcccac gactgtcatg
     2101 taggagacga cgtggtgatc gccaacgcca cccagtgcgc cggccacgtc accattcacg
     2161 atcgagccat cctcagcgga ctcaacgcgg tccaccagtt cgtgaccatc ggcacgtatg
     2221 ccttcgtggg tggcgggtcc cgggtgaatc aggacattcc gccgtacgtc aaggcagtcg
     2281 gaaatccgat ggagctgtac ggactcaact cgatcgggct tcagcgggca ggctttcccg
     2341 gagacacgat cgccgccctc aagcgggcat accggctgtt cttcaactcc gatctcaatt
     2401 tgtcgcaggc attggagcgt gcgcgtgccg atctaccgcc gctcccggag gtcgagcgct
     2461 tcctggcttt tgtcgagtca agcgagcggg gcgtgcccgc gtgagccccc ggctgcccgt
     2521 cggggtcatc ggggtcggcg cgctaggaca gcaccacgcc cgccacctgg ccggtctcga
     2581 cgaggtacgg ctggtgggcg tgtacgactg cgatacggcc cgggcgacgc aggtcgcgaa
     2641 cgggctcgcg accactgcct tcaccgagat ggacgatctc ctgcgccgag tggaggcggt
     2701 cacggttgcg gtgcccacgc cggcgcacgc cgaggtgggc attcgcgccc tcgacctggg
     2761 cgtacccgtg ctcatggaga agccactcgc agtgaccttg gccgaggccg acaatctgat
     2821 cgcctccgcc aggcggcggc aggtgcagct ccaggtgggg cacatcgagc ggtataaccg
     2881 ggcgcttcgg gcggcagagc cgttcctcga cggtccgcgg tacatcgaga gcctgaggct
     2941 cgctcccttc cagcctcgtg gcaccgatgt cgccgtggtg ctcgatctca tgatccacga
     3001 tctcgatctg gtgcttcatc tcaccggcag tagcgccacc gaagtccgcg cctcgggcct
     3061 tcccgtgctt tcttctcatc tcgacctcgc caacgccagg gtcgagttcg ccaacggtgc
     3121 cgtcgcgctc gccaccgcgt cgcgggtcgc ccgcgagcgg atccgccgac tccggctctt
     3181 ccagcccaac gggtatttct ctctcgacct cgcgagcggc ggaggcgagt tcatgcgggt
     3241 gcgcagcggc tggcagccgg gcacggggcg tgacctggcg gac
//
LOCUS       DASYRV010000085         2824 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3977276, whole genome shotgun sequence.
ACCESSION   DASYRV010000085 DASYRV010000000
VERSION     DASYRV010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2824
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3977276"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..570
                     /locus_tag="VGQ24_01915"
     CDS             <1..570
                     /locus_tag="VGQ24_01915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453615.1"
                     /translation="YAFRDPRPLFQALDLLAGRAAIDLGRVRVRFYGTPVAEIRALAK
                     GFACSSAVEALPRIGRSEMLTLQQSATVLLNLQGSEAGGAVPSKLLEYLGARRPILNI
                     PSDQGGGDAVLNRTGAGQTATEVEEIAAVVGAWYSEWRRTGVVRWPGRASEVAFYSRR
                     NQAAILGRVFDEAASQTPPVNVDGSVCLR"
     gene            974..>2824
                     /locus_tag="VGQ24_01920"
     CDS             974..>2824
                     /locus_tag="VGQ24_01920"
                     /inference="COORDINATES: protein motif:HMM:NF028199.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heparinase II/III family protein"
                     /protein_id="HEV8453616.1"
                     /translation="MKPGRAGEIIVWLRGHRRGMIRAVLAAVGLIAVLGSWYAFSRNS
                     IDLIAALDPAAPLARDVKRAETDGGRAAGLQLMAAHFRARPLRSNVPPHQVWDLDPAQ
                     TAHTASLALENLGALWGHPFPWGPGTKVAWLSGDHELLFHLQRQLFLFDLITQWQTRP
                     QPALLSFAAGFMAEWQRGNAFWPSVNPYVWNDDAMSNRIDAWLWLMEARRKAGFTSEE
                     EELAFLRSLLRHAAHLLNDDEHNFQTNHGMQQNLALLSIAVNYPEFQDAAMWRRVAIQ
                     RSLRFVEEATSTKGSFKEVAPEYQLFGLTLLTSFYAICRSADIELPGWITQRLRMMAT
                     FTRALLRPDGSFPLVGDTRPMRVCSEGWPWPLLPTWPELAEFRHATSGQLLPPNEPGI
                     DVDEEAGYFILRAPGPTWTREKALMVTMQFGPPSRAHGHLDKLSVTLYGGGTPLLDGP
                     GYPSWWDGSRVAMIATPEQNTVDVDGLSQAAGEATIGFQWFPDGVAKPVLFQARSSLY
                     RGVIHRRTLAYGSSPSEVLIIDEMISGNHHQYSAHFRLAPGLDGQILGATVVGTVGGR
                     VMIELNSWLVQGASITRPRVTLEGRKATFGAPGANIALVTLLSTTGKRSKI"
BASE COUNT          511 a          853 c          899 g          561 t
ORIGIN      
        1 tacgcattcc gagacccgcg gccgctcttc caggctctgg atctcctggc gggacgggcc
       61 gcaatcgacc tcggccgggt gcgagttcgg ttttatggaa cgcccgtggc cgagatccgc
      121 gcattggcga agggatttgc ctgctcgtcc gctgtggagg cgcttccgcg catcggccga
      181 tccgagatgc tcacgttgca acaaagtgca acggttcttc tgaacctgca gggtagcgag
      241 gcaggcggcg ccgttcccag caagctcctc gaatatctgg gggctcgccg gccgatcctc
      301 aacataccaa gtgaccaggg tgggggggat gccgtcctga accggacggg cgctgggcag
      361 acagccaccg aggttgagga gattgcggca gtcgttggag cctggtacag cgagtggaga
      421 aggaccggcg ttgtccgatg gcccggtcgg gcgtcggaag tggcgttcta ttcccggcgc
      481 aatcaagccg ccattctagg ccgtgtcttt gatgaggcgg cgtcgcaaac gccgccagtg
      541 aatgtcgacg gttccgtgtg cctgaggtag gcgaccaaga gaaaccttga tagtgcgttt
      601 gatctccggc gccgctgggc cttgacgaag cccagaccga gggatcatca ttcacccgag
      661 tctgtcgatg ccatcgcgat caatggcgcg gggccggcgg catgcgcctg actgccgggc
      721 tcgacgcggc atcgttttga ccccccggta gcgcctcagc cgaggcatcc tagtgacgaa
      781 gcggagtcaa agcgaccttc gtgcggcggc ttgtggtttc gtatttctga cggctggcgt
      841 actctcgcac cctcgagtcc tcggtagact cgtcgctgcc gacggcacca tagatccccc
      901 ggcggtcgtt cgcgctttga gggccctctc ggttgcggca accctgaccg cggcagggtt
      961 tcttggcgtg gcgatgaagc ccggaagagc cggagagatc atcgtttggc tgcgcggcca
     1021 ccggcgcgga atgatccggg ccgtgctcgc cgccgtcggc ctgattgctg ttctcggatc
     1081 ttggtacgcc ttcagccgta actcgatcga cctaatcgct gctttggacc cagcggcgcc
     1141 tctagcgcga gatgtaaagc gagctgaaac agatggcggc cgggcggccg gcttgcagtt
     1201 gatggccgcg cacttcagag cgcgcccgtt aagaagcaac gtgccgccgc atcaggtctg
     1261 ggatcttgac ccggcacaga cggcacatac agcatctctc gcgctggaga atctcggggc
     1321 gctctgggga caccccttcc cttgggggcc gggcaccaaa gtcgcttggt tgtcggggga
     1381 ccatgagcta ctcttccacc ttcagcgaca actattcctg ttcgacctga tcacacagtg
     1441 gcagacgcgc cctcagcctg cactgctgag cttcgcggcg ggcttcatgg ctgagtggca
     1501 gcggggcaac gcattctggc caagcgtgaa cccatatgtg tggaacgacg acgcgatgtc
     1561 gaaccggatc gacgcctggc tctggctaat ggaagcccgc cgaaaggcag ggttcacgtc
     1621 cgaggaagag gaactcgctt ttctccgctc cctccttcgg cacgcggcgc acttactcaa
     1681 tgatgacgag cacaacttcc agactaatca tgggatgcag caaaacctag cccttctttc
     1741 aattgctgtt aactacccgg agttccagga tgccgcgatg tggcgccgtg tggccattca
     1801 gcgctcgctc cggtttgtag aggaagccac ctcgaccaaa ggctccttca aggaggttgc
     1861 gcctgagtac cagctgttcg gcctgacctt attgacatcc ttctatgcga tttgtcgatc
     1921 ggccgatatc gagcttcctg gctggatcac gcagaggctg aggatgatgg ccactttcac
     1981 gcgtgcgctg ctgcgccccg acggatcctt tccattggta ggcgacacgc ggccgatgcg
     2041 tgtctgtagc gaaggctggc cgtggccgct cctaccgacg tggccggaac tggcggagtt
     2101 tagacatgcc acgtccggac agctgttgcc gccgaacgag ccgggaatcg atgtggacga
     2161 ggaggcaggc tattttatcc tgcgcgcgcc cggtcccacc tggacgcgag agaaagcgct
     2221 gatggtaacg atgcagtttg gaccgccctc ccgcgcacac ggtcacctgg acaaactttc
     2281 ggtgaccctt tacggaggtg gcactccgct gctcgatggc ccgggctacc caagttggtg
     2341 ggacgggtca cgggtggcca tgatcgcaac tccagagcag aacaccgtcg acgttgacgg
     2401 tctctcgcag gccgcaggtg aggctacaat cgggttccag tggtttcctg acggcgtggc
     2461 caagccagtg ctctttcagg caaggagttc tctctaccga ggggtgattc accgcaggac
     2521 cctggcctat ggatcttcac cgagcgaagt cctgatcatc gacgagatga tctcggggaa
     2581 tcaccatcaa tactccgccc attttcgact cgcaccgggt cttgacggcc agatactcgg
     2641 tgccactgta gtggggacag tggggggcag ggtcatgatc gagcttaact cgtggctcgt
     2701 tcaaggcgcg agcatcacgc ggccacgggt caccctggag ggcagaaagg ccacttttgg
     2761 cgcacctggg gctaatatag ccttggtcac gctcctctcg acgacgggaa agcgctcaaa
     2821 gatc
//
LOCUS       DASYRV010000086         8696 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_448256, whole genome shotgun sequence.
ACCESSION   DASYRV010000086 DASYRV010000000
VERSION     DASYRV010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8696
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_448256"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..527
                     /locus_tag="VGQ24_01925"
     CDS             <1..527
                     /locus_tag="VGQ24_01925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453617.1"
                     /translation="DATDFPRKITNFNDIEIDTNGNLYLSDSGDWEGGGGVIFRITQD
                     KKITPVITYEDDVRLVSPNGLVMDGADKLLEVDYTTGFLFRVDLKGKSMEKVAGGFGA
                     SDGLVRDAGGRLIITDYAGHRVFVLAKPDAKPQEIKVNGIESSADLAISPDGKSLIIP
                     DMGGGKLAILAIPK"
     gene            complement(677..1108)
                     /locus_tag="VGQ24_01930"
     CDS             complement(677..1108)
                     /locus_tag="VGQ24_01930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453618.1"
                     /translation="MRHAPAFLLAMLLTAPLAAQDRPYTEGPVTSVSYVRVKPGMFDT
                     YVKYLDTDYKRLMEAQKKEGVILDYGVYTSPQRDEDDWNMVLTVTYKNMAALDNLRDR
                     AEPITMRTLSTTPEKAAAANIERGTMRDQVGSRLLRQLILK"
     gene            1232..1654
                     /locus_tag="VGQ24_01935"
     CDS             1232..1654
                     /locus_tag="VGQ24_01935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HEV8453619.1"
                     /translation="MPSTSRARPKPSRKRRSTTPSPLTRLRKLCLGLPEAHEVEAWGE
                     PTFRVCNKLFAMYAAADNHHGGGRPAVWCKAGPGNQALMVQAAPARFFVPPYVGPSGW
                     VGIWLDGAVDWSELADLLRDSYRLVAPKRLHAKLDKLR"
     gene            1714..1911
                     /locus_tag="VGQ24_01940"
     CDS             1714..1911
                     /locus_tag="VGQ24_01940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453620.1"
                     /translation="MIGLVKIARLWGPGHQGHKQLEARVEAVEQELAGLQHELSETQE
                     RLDFAERLLAQGRETKRLGEP"
     gene            1908..3482
                     /locus_tag="VGQ24_01945"
     CDS             1908..3482
                     /locus_tag="VGQ24_01945"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEV8453621.1"
                     /translation="MITRIASLSAVLLASIQLQASAQQPPPGFDAYVKQVMQTFTVPG
                     LSVAIVKDGKVVLAKGYGVRRMGDPAPVDAHTRFGIASNTKLFTATALAMLVEEGKVE
                     WDKPVTNYLPAFAMSDPYVTHELTVRDLLVHRSGLGLGAGDLLWWPPSTYNRKEIARR
                     IRYIPLATSFRSAYAYDNVLYLVAGEVIEAVSGESWEDFVRTRILAKVGMTDSDVRHS
                     GATQGGNVAGTHAEVNDTVRPVDPFASDNTNPAGGIMSGAADMAKWMMVQLDSGRVAN
                     GSRLFSPASARQLWREVTPTPAGDIPPGMEALAHLRPTMSGYALGLNVRDYRGQILRQ
                     HTGGLPGYVSKVAMIPNLRLGVAVLTNQESGLAFESIVDRVLDYYIGAKAPDYPALFQ
                     QLRQRNRQKMEEAARKAASTRDSTAGPSLPLAKYVGRYRDPWYGDVTIAQEGRGLSIR
                     FTHTPALVGDLMHWQHDTFLARWRDRELRADAYATFSLNPDGTVERLKIVPASGEVDF
                     SFDFQDLVLKPVKDSS"
     gene            complement(3477..4367)
                     /locus_tag="VGQ24_01950"
     CDS             complement(3477..4367)
                     /locus_tag="VGQ24_01950"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEV8453622.1"
                     /translation="MRLYLSLLASLVMLAPRLEASGNPHPHRVTILYDAFGGRPGLIR
                     DWGFAALVEYGGKRILFDTGNNAEIFARNVRALGVDLRRLDFAVISHRHGDHTSGLSY
                     LLRVNPHVKIYAPKEGFGVFGAALPSTFYRRDASLPDSMRYFKGSPAETMTFGTPWPQ
                     ATIQWIDSLTEVVPGVTLISTVSQNAGTLELRELSLAVRGPEGLVLLVGCSHPGIETI
                     LQAARPLGDHVAIIFGGLHLVTTPDTTIARIASALRDRWGVVNVAPGHCTGEPAFAEL
                     QRVFGARYRYAGLGVATEIS"
     gene            complement(4466..4744)
                     /locus_tag="VGQ24_01955"
     CDS             complement(4466..4744)
                     /locus_tag="VGQ24_01955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453623.1"
                     /translation="MTEPYPALNTREFIAKWHSAVEKHLIAELADLLPQLAGAPHGSD
                     FGKEQYAALAHHLAYALQVAGSSKDGLQAALTYLKQAGATTDEIPQPS"
     gene            complement(4841..5338)
                     /locus_tag="VGQ24_01960"
     CDS             complement(4841..5338)
                     /locus_tag="VGQ24_01960"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HEV8453624.1"
                     /translation="MSEIAALFHRLSYGVYVVGVAAGNRRDGFTAAWVMQASFDPLLL
                     ALSINPSNASYELLHVGGGFTVNVLTQAQLDLARRFGTRSGRNEDKLAGIRWRPGRSG
                     APILEQALAYFDCELAGRHRAGDHELVLGRVVDGKILDLGAAPLTYADTGDMDGSADL
                     YPTSL"
     gene            complement(5335..5721)
                     /locus_tag="VGQ24_01965"
     CDS             complement(5335..5721)
                     /locus_tag="VGQ24_01965"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEV8453625.1"
                     /translation="MIEVETLHHVSISVTDLARAKQFYGQVLGLREISRPPFDFLGTW
                     YQLGDRQLHLIVHPGTRTLRGTTLIESREGHFGIRVRSYRETLEHLKAQGVPIRDRPH
                     NLTPWPQIYVTDPDGNVIELNAERLD"
     gene            complement(5730..6212)
                     /locus_tag="VGQ24_01970"
     CDS             complement(5730..6212)
                     /locus_tag="VGQ24_01970"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEV8453626.1"
                     /translation="METAHRIGRLAFAVFIALPGCAPKHHEDETASTAAVNEIWKEYS
                     ASLNAGDLDRWLALWTEDGVQMPPDEPVVVGKERIRARNRAVLDRFAFDIGITNQEVR
                     TAGDLAVARGTYTATLTPKQGGGGIPIDGKFMTILVRQPDGGWKIHRDIFNSNVPAGK
                     "
     gene            complement(6325..7908)
                     /locus_tag="VGQ24_01975"
     CDS             complement(6325..7908)
                     /locus_tag="VGQ24_01975"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEV8453627.1"
                     /translation="MPETKLIGLPARETPSELKSTAGHRRPFPADLLRQASRRLQILA
                     LVGAALWILGPALGHLALYLTHPENPRWAQFGATDLICTAGVLISLAVFVYTRTGDHD
                     PAFVMDLALVYMVGCAAASGLMIHWGPVSSTPADTRPMITWIAPVVLTFAALMPASPW
                     RMLVAGFLAMSMDPLGMILAHASGAYHFGPLRNAFIMHYPSYLLLGVAVVISSVVTGL
                     GKQVAKEREMGSYRLGERLGQGGMGEVYRATHRMLARPAAIKLIHPEVLATQDRRSVR
                     LAVTRFKREADAAAKLRSAHTVELYDFGEMEDGTLYFVMELLEGMDLESLVRREGPLP
                     QKRVIHILRQVCESLEEAHASGLVHRDIKPANIHVGRVGLRHDFVKVLDFGLVKSVMT
                     PPSEDSMATAAGLTPGTPAYMAPEMALGEVVDGRADLYALGCVAYFLLTGQLVFEAAN
                     GLQLIAKHMQDAPVPPSKRTELDVSPQLEQVVLACLAKRPEDRPQTATELDRMLAEIE
                     IEPWSEEEATRWWRTHQPA"
     gene            complement(7944..8309)
                     /locus_tag="VGQ24_01980"
     CDS             complement(7944..8309)
                     /locus_tag="VGQ24_01980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453628.1"
                     /translation="MSTRPLLSPPAALALVALLLLTACDQWALFVTSDGVLSISIFSD
                     GFQPQGRFRVRARQADGTIRVLDLPASGPLTLSGTAGSTVELTLLSPEGCRVAAPNPR
                     TVSVGPDQTVGVVFDVQCG"
     gene            complement(8261..8569)
                     /locus_tag="VGQ24_01985"
     CDS             complement(8261..8569)
                     /locus_tag="VGQ24_01985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453629.1"
                     /translation="MGPRTPYKGRRVFRTSAGYMLVFVAAELIFLVGAVYTYRARGWT
                     WTSAALIALTVLGLAGRSPLRYRKTRRPLPALQPSTYLYSARSCPPDPCFPHPRPSPW
                     "
BASE COUNT         1542 a         2740 c         2914 g         1500 t
ORIGIN      
        1 tggacgccac tgacttcccc cggaagatca ccaacttcaa cgacatcgag atcgacacca
       61 acggcaatct ctacctctcg gacagcggcg attgggaagg cggcggcgga gtcatcttcc
      121 ggatcacaca ggacaagaag atcaccccgg tgatcaccta tgaagatgat gtgcggttgg
      181 tgagccccaa tggtctcgtg atggatggtg ccgacaagct gctcgaggtg gactacacca
      241 cagggtttct gttccgggtt gatctgaagg ggaagagcat ggaaaaggtc gccgggggct
      301 ttggagcttc cgacggactg gtgcgggatg ccggcggccg gctcatcatc accgactacg
      361 ccggacaccg ggtgttcgtg ctggccaagc cggacgcgaa gccgcaagag atcaaggtga
      421 acggcatcga gtcatcggcc gacctggcca ttagcccgga cgggaagagt ctgatcattc
      481 cggacatggg tggggggaag ctggcgatat tggcgatacc gaagtagccg ggagtcggga
      541 gtcaggagtc gggacctgcg acggcagcac tccaagcccc cgactccaga ctcctgactc
      601 ctaacgaccc attctccgca tatcctccag gagcgcagcc ggggccaccg gtcctcggat
      661 cgtctcaccc accctattac ttcagaatca gctggcggag caggcggctc ccgacttgat
      721 cgcgcatggt ccctcgctcg atgtttgccg ccgccgcctt ttccggcgtg gtgctcaggg
      781 tccgcatggt tatcggctcc gcccggtcac gcaggttgtc cagcgcggcc atgttcttat
      841 aggtcaccgt gaggaccatg ttccaatcgt cctcatccct ctggggagag gtgtacaccc
      901 catagtcgag gatcacacct tccttcttct gggcttccat gagtcgcttg tagtcggtgt
      961 cgaggtactt aacgtacgta tcgaacatgc caggcttgac gcggacatag ctcacgctgg
     1021 tcaccggtcc ctccgtgtag ggccggtcct gtgccgcgag gggtgcggtc aacagcattg
     1081 cgaggaggaa ggcgggagca tggcgcatag tgcctccggg acggtgatgg gcattggctg
     1141 acggctggag tggatcgagt gcgtcaatat gcgggctgct gtcaatggac gctactcgcg
     1201 ccagaccccc tttcgggaca gattgtcgga catgccctca acctcccgcg cccggcccaa
     1261 accttcccgt aagcgtcggt cgactactcc atcaccgctg acccggctgc gcaagctctg
     1321 ccttggactg ccggaagcgc acgaggtcga ggcctggggt gagccgacgt tccgcgtctg
     1381 caacaagctg ttcgctatgt acgcggccgc cgacaatcat catggaggcg gacgcccggc
     1441 ggtgtggtgc aaggccggac cgggcaatca ggcgctcatg gtccaagccg caccggcgcg
     1501 gttcttcgtg ccgccttatg ttggcccgag cggctgggta ggaatctggc tggatggcgc
     1561 agtcgactgg tccgagctgg cggatctcct gcgggactcg taccggctgg tagctccgaa
     1621 gcgactccac gccaaactcg ataagctgag gtagaagggc gcgacatggg tcccgaatct
     1681 ctcgtattac tcattcctat ctccgccatc atcatgatag gtctggttaa gatcgcccgc
     1741 ctgtggggcc cggggcatca aggacacaag caattggagg cccgggtcga agcggtcgag
     1801 caggagctcg ccgggctgca gcacgagctg agcgagacgc aggagcgtct ggattttgcg
     1861 gagcgtctgc tggcacaggg acgggagacc aagcggttgg gcgagccatg atcactcgga
     1921 tcgcctctct ctccgccgtt ctgctcgcct ccatccagct ccaagcatcc gcccagcagc
     1981 ctcctccagg ttttgacgcg tacgtcaagc aagtcatgca gaccttcacc gtgcccggcc
     2041 tctcggtggc gatcgtgaag gacggaaagg tggtcctcgc caagggctac ggcgtccgcc
     2101 gcatgggcga ccccgcacca gtggatgccc acacccggtt cggcatcgcg tcgaacacga
     2161 agctgttcac cgcgacggcg ctggcgatgc tggtggagga agggaaggtc gagtgggaca
     2221 agccggtcac caactatctc ccggcattcg ccatgtccga tccgtacgtc acccacgagc
     2281 tgacggttcg tgacctgctg gtgcatcgca gtgggctcgg gctcggcgcc ggcgacttgc
     2341 tctggtggcc gccatccacc tacaaccgca aggagatcgc gaggcggatc cggtacatcc
     2401 cgctggcgac gtcgtttcgc agcgcctatg cctacgacaa cgtgctctat ctcgtggccg
     2461 gtgaggtgat cgaggcggtg tcgggcgagt cctgggagga cttcgtgagg acccggatcc
     2521 ttgccaaggt cgggatgacc gacagcgacg tccggcattc gggggcgaca cagggcggaa
     2581 acgtggccgg gacccacgcg gaggtgaacg acaccgtccg gccggtggat ccgttcgcga
     2641 gcgacaacac caacccggcc ggcgggatca tgtcgggcgc ggcggacatg gccaagtgga
     2701 tgatggtgca gctggactcg gggcgagtgg cgaacggatc gcgcctcttc tcgccggcga
     2761 gcgcccggca gctctggcgg gaggtgaccc cgacgccggc cggcgatatc ccacccggca
     2821 tggaagcgct cgctcacctc cggccaacca tgtcgggcta tgccctcggc ctaaatgtgc
     2881 gcgactaccg gggccagatc ctccgccagc ataccggtgg gttgccgggc tatgtgtcca
     2941 aggtggcgat gatcccgaac ctccggctcg gcgtggcggt gctgaccaac caggagtcag
     3001 gtctcgcgtt cgagtcgatc gtcgatcggg tgctggatta ttacatcggg gccaaggcac
     3061 ccgactaccc ggcgctcttt cagcagctgc ggcagaggaa ccggcagaag atggaggagg
     3121 ctgcgcggaa ggccgcttcg acccgcgact ctaccgcggg cccgtcgctt ccgctggcga
     3181 agtatgttgg caggtaccgg gatccgtggt acggcgatgt gacgattgcc caggaaggaa
     3241 ggggattgtc gatccggttc acccacacgc cggccctggt gggcgatctg atgcattggc
     3301 agcacgacac gtttctggcc agatggcgcg atcgggagct ccgggccgac gcctatgcga
     3361 cgttttcgct caatcccgat ggaaccgtgg agcggctgaa gattgtgccc gcgtcgggcg
     3421 aggtggattt cagcttcgac ttccaggacc tggtgctgaa gccggtgaag gactcctcat
     3481 gagatctcgg ttgccacccc cagaccggca taccggtatc gagccccgaa gactcgctgc
     3541 agctcggcga acgccggctc gccggtgcag tggccgggag cgacgttaac gactccccac
     3601 cggtcccgga gcgcggacgc gatccgcgcg atggtcgtgt cgggcgtcgt gaccaggtga
     3661 agcccgccga aaatgatggc gacgtgatcg ccgagcgggc gagccgcctg gaggatggtc
     3721 tcgataccgg ggtgggagca gccgaccagc agtaccagcc cctccggccc acgcaccgcc
     3781 agcgagagct cccgcagctc gagggtgccg gcgttctgag agacggtcga gatgagggtc
     3841 acgccgggga cgacctcggt caggctgtcg atccattgaa tggtcgcctg cggccaggga
     3901 gtcccgaacg tcatcgtctc cgctgggctg cccttgaagt agcgcatcga gtcagggagg
     3961 ctcgcgtccc ggcgatagaa cgtgctcggc agcgcggcgc cgaagacgcc gaacccctcc
     4021 ttgggggcgt aaatcttgac atgcgggttc acccgcagca gatagctcag cccggatgtg
     4081 tggtcaccgt ggcggtgcga gatcaccgcg aaatcgagcc gccgcagatc gactccgagg
     4141 gcccggacat tccgggcgaa gatctcggcg ttgttgccgg tgtcgaagag aatccgtttg
     4201 ccgccgtatt ccaccagcgc ggcaaagccc caatcccgga tgagacccgg gcgtccgccg
     4261 aatgcatcgt acaggatggt cacccgatgc gggtgaggat taccggaggc ctccaggcgg
     4321 ggagcgagca tgaccaggct cgcgagcagc gataagtaaa gacgcattgc gtgggtctcc
     4381 gccggtgggt aggtgcgaga atcgcccgcg cgaaacgatc tacgctacgc cggcgcggtc
     4441 cgagtgcgtc gctacggccg agatctcagc tgggctgcgg tatctcgtcc gtcgtcgcgc
     4501 cagcctgctt caggtatgtc agggctgcct gcaggccatc cttcgagctc cccgccacct
     4561 gtagggcgta ggccaggtgg tgcgccaagg ccgcgtattg ctccttcccg aaatcgctgc
     4621 catgcggtgc gcctgccagt tggggaagga ggtcggccag ctcggcgatc aggtgcttct
     4681 cgacggcgct gtgccacttg gcgataaact cccgggtatt cagcgcgggg tatggttccg
     4741 tcatggtgtc tccgtggctg aacgttcttc tggtaacgcc taacctgcag cccggtccga
     4801 gccggcgcaa cgtcatcgac cggcgagccg cacggctgag tcagaggctg gtagggtaaa
     4861 ggtcggcgct gccatccatg tcgccggtgt cggcataggt caacggcgcc gcacccaggt
     4921 cgaggatctt cccgtccacc acccggccga gcaccagctc gtggtcgccg gctcggtggc
     4981 gccccgcgag ctcgcagtcg aagtaggcga gcgcctgttc gagaatgggg gcgccgctgc
     5041 ggccgggtct ccagcgaatc cccgccagct tgtcctcatt ccgaccggag cgggtgccga
     5101 accggcgggc caggtccagc tgtgcctgcg tcagtacgtt caccgtgaat ccgccgccca
     5161 cgtggagcag ctcgtaggag gcgttgcttg gattaatgct caacgccagc agcagaggat
     5221 cgaacgatgc ctgcatcacc catgcggcgg tgaacccgtc acgccgattg ccggccgcaa
     5281 cgcccacgac gtagactccg taggagagcc ggtgaaagag cgccgcgatc tcgctcaatc
     5341 gagccgctcc gcgttgagct cgatcacgtt gccgtccggg tcggtgacgt agatctgggg
     5401 ccacggcgtg aggttgtggg gtctgtcccg aatgggcacc ccctgcgcct tcaggtgctc
     5461 cagcgtctcg cgataactcc gcacccggat accgaagtgc ccctcgcgcg actcgatcag
     5521 ggtggtcccc cgcagcgtcc gggttcccgg atggacaatg aggtggagct ggcgatcgcc
     5581 gagctgatac caggttccca gaaaatcgaa tggcggccgt gaaatctcgc ggaggcccag
     5641 tacttggccg tagaactgct ttgcccgggc gagatcggtg acggagatac tgacgtggtg
     5701 gagggtctcg acctcgatca ccgcgtcccc tacttaccgg cgggcacgtt ggagttaaag
     5761 atgtcgcggt ggatcttcca gcccccatcc ggctgtctca ccaggatcgt catgaacttc
     5821 ccgtcgatgg ggataccgcc gccgccttgt ttcggcgtca gggtggccgt gtaggttcca
     5881 cgcgcgacgg ccaggtcccc cgccgtgcga acttcctggt tcgtaatccc gatatcgaat
     5941 gcgaagcggt ccagaacggc tcgattcctt gcccggatcc gttccttgcc tacgacaaca
     6001 ggctcatcgg ggggcatctg caccccgtcc tccgtccaaa gcgccagcca acggtccaga
     6061 tcgccggcgt tgagacttgc cgagtattct ttccagatct cattgactgc tgcggtcgag
     6121 gccgtctcat cctcgtgatg cttcggggca catccgggaa gagcaatgaa gaccgcgaaa
     6181 gcgagacgac cgatgcgatg agctgtttcc atgcagtctc cgagtagcag gatggatttc
     6241 gcgactgact aattctggtc tgtggcagcg gatcgggtaa ggccggggtt gcgccaaaca
     6301 ggggccggtt tgcgacagca ccattcaggc cggctgatgc gtgcgccacc agcgggtggc
     6361 ctcctcctcg ctccagggct cgatctcgat ctcggcgagc atccggtcca gctcggtggc
     6421 cgtctgaggc cggtcttcgg gccgcttcgc caggcaggcg aggacaacct gctccagctg
     6481 gggcgacacg tcgagctcgg tgcgcttcga cggcggcacc ggcgcgtcct gcatgtgctt
     6541 ggcgatgagc tggagcccat ttgccgcctc gaataccagt tggccggtga gaaggaaata
     6601 ggcgacgcaa cccagggcgt agaggtcggc tcgcccatct actacctcgc ccagcgccat
     6661 ctccggcgcc atgtaagccg gtgtgcccgg cgtgagcccg gccgcggtgg ccatcgagtc
     6721 ttcgctcggc ggggtcatca ccgatttcac cagcccgaag tcgagcacct ttacgaaatc
     6781 atgccgcaga cccacccggc cgacgtggat attggccggc ttgatgtcgc gatgcaccag
     6841 gcccgaggcg tgggcctcct ccagcgactc gcacacctgc cgcaggatat gaatcacccg
     6901 cttctggggc agcggcccct cccgacgcac caggctctcg aggtccatcc cctccagcag
     6961 ctccatcacg aagtacaggg tgccgtcttc catctccccg aagtcgtaca gctcgaccgt
     7021 gtgggccgat cggagcttgg ccgcggcgtc cgcctcacgc ttgaaccggg tgaccgccag
     7081 cctgacactc ctccggtcct gggtcgcgag cacctcggga tggatcagct tgatggcggc
     7141 gggccgggcg agcatccggt gggtggcccg gtacacctcg cccatcccac cctggccgag
     7201 ccgctccccc agccggtagc tccccatctc ccgttccttg gccacctgtt tgccgagacc
     7261 ggtaactacg ctcgagatca ccacggcgac gccgagcagg aggtagctcg gatagtgcat
     7321 gatgaacgca ttgcggagcg gcccgaaatg gtaggctccc gaggcgtggg cgaggatcat
     7381 tcccagcggg tccatcgaca tggccaggaa tccggcgacc agcatcctcc agggggatgc
     7441 cggcatcagt gccgcgaacg tcaagacgac gggggctatc caggtgatca tcggcctggt
     7501 gtccgccggc gtggacgaaa ccggccccca gtgaatcatg aggccgctgg cggccgcaca
     7561 gcccaccata tacaccaggg ccagatccat tacaaacgcc ggatcgtggt ctccggtccg
     7621 ggtatagacg aacaccgcga gcgagatcaa gactccggcg gtgcagatga ggtcggtcgc
     7681 gccaaactgc gcccagcgcg ggttctcggg gtgggtcagg tacagtgcga ggtgtcccag
     7741 cgccgggccc aggatccaca gagccgcccc gaccaacgcg agaatctgga gtcgacggga
     7801 ggcctggcgg aggaggtcgg ccggaaatgg gcggcgatga cccgcggtgc tcttgagctc
     7861 ggaaggggtc tctcgggcag ggaggccgat cagtttggtc tcaggcattc gtttgcgtca
     7921 tcgagaccgg atcgcggtcc ccatcagccg cactgcacgt caaacacgac gccgacggtt
     7981 tggtcggggc cgacgctgac cgtgcggggg ttcggggccg cgacccgaca gccttccggc
     8041 gagagcagcg tcagctccac tgtgctcccc gcagtaccgc tcaaggtcag gggaccggat
     8101 gccggcaggt cgaggactcg aatggtgccg tcggcttggc gggcgcggac gcggaagcgg
     8161 ccctggggct ggaagccgtc gctgaaaatc gagatggaaa gcaccccgtc gctggtgacg
     8221 aagagggccc actggtcgca cgcggtgagc aggaggagag ctaccagggc gagggccgcg
     8281 ggtggggaaa gcaggggtcg ggtggacatg agcgcgctga gtaaagatag gtcgacggct
     8341 gcaaggcggg gagcggccgg cgggtcttgc ggtaccgcag tggtgaacgc ccggcgagtc
     8401 cgaggacagt gagagcgatc agcgcggcgg aggtccaggt ccacccccgg gcgcgatagg
     8461 tatacacggc gccgaccagg aagatcagct ccgcagcaac aaagacgagc atgtagccgg
     8521 ctgaggtgcg aaagacccgc cgtcccttgt acggagtcct ggggcccata ccgtaaggta
     8581 tcgacctctt ggaggtgcgc tacttcggtt gccgacaagg atgccgaggc catcgacggc
     8641 tgggtgctgt ctacacaagc aaccaagggg ttgcacattt cgagcccctc gcgtag
//
LOCUS       DASYRV010000087         8844 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1886703, whole genome shotgun sequence.
ACCESSION   DASYRV010000087 DASYRV010000000
VERSION     DASYRV010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8844
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1886703"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..290
                     /locus_tag="VGQ24_01990"
     CDS             <1..290
                     /locus_tag="VGQ24_01990"
                     /inference="COORDINATES: protein motif:HMM:NF015682.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453630.1"
                     /translation="GGSLKCALVGGRLAGLAQSNGWSGVILNGCIRDAVEIRQLRVGI
                     RALNAVPLRSGKNGAGERGGTLSFAGVTFAPGRFVYADADGVLVAERDLLQ"
     gene            complement(623..1471)
                     /gene="lgt"
                     /locus_tag="VGQ24_01995"
     CDS             complement(623..1471)
                     /gene="lgt"
                     /locus_tag="VGQ24_01995"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: protein motif:HMM:TIGR00544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEV8453631.1"
                     /translation="MTVYPFIIHLGPLEITGYGLMLMVAFLMGGWLIARQLRENNLRE
                     DYAADIVAAAVIGGIIGAKLWYVALTRDPGALFSRGGLVWYGGFIGGALAVILNGWRL
                     RVPLRWTMQLAAPALAAAYALGRVGCFLVNDDYGGPTNLPWGVKFPNGSPPSTAANLH
                     GFGVSVSPGIDPSTVLTVHPTQLYEVAAMLVVFAVLWVLRKKGRPVGWLFGVYLVFAG
                     IERFLVEILRAKDDRLLGPFTIAQLTSVILVALGTVLMAMWRRGPSPEAGSYLETGSR
                     SPASKR"
     gene            complement(1468..2547)
                     /gene="tsaD"
                     /locus_tag="VGQ24_02000"
     CDS             complement(1468..2547)
                     /gene="tsaD"
                     /locus_tag="VGQ24_02000"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:TIGR03723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEV8453632.1"
                     /translation="MTEWILGIESSCDETSAAVLRSDNGLRSLASLVILSQDVHRIFG
                     GVVPELASRAHVQAMGSVVDRALSDAGITLSQVDGVAVTAGPGLVGALLVGVMYGKTL
                     AFSLDRPLIGVNHLEGHLFAPTLEDSELVPPFIGLLVSGGHTMLLDVPAWGEYRLLGQ
                     TLDDAAGEAFDKVANLLGLGYPGGAAIERLAREGRPRRYRLPSPMLSELEQDGPNRYA
                     FSFSGLKTAVLRAVRAAETAGASGDGLAGARPDLARGFQDAALEVLIAKTAHAVEATG
                     YSRAMIGGGVACNQALATGLRDRLAGRARVSVASPRLNTDNAAMIAAAGAWRLARGER
                     SGWDLEPRDDLPLPGISFHSHGSTS"
     gene            complement(2563..3099)
                     /locus_tag="VGQ24_02005"
     CDS             complement(2563..3099)
                     /locus_tag="VGQ24_02005"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEV8453633.1"
                     /translation="MSRQWMVVGIVVAGLLAGAVALAKYGPDVQSVDVGGRAPDFRAV
                     DLATGDSVSLRERYRGTVTLVNVWATWCVPCRVEMPAMEKLYQSLAPRGFRIAAVSID
                     EGSPEDVQAFGRELGLSFDILQDRTTKVQEIYQTTGVPESFLLNRQGVIVKRVIGAHD
                     WNSAVNRALIERLLDEPG"
     gene            complement(3106..3777)
                     /gene="rpe"
                     /locus_tag="VGQ24_02010"
     CDS             complement(3106..3777)
                     /gene="rpe"
                     /locus_tag="VGQ24_02010"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEV8453634.1"
                     /translation="MTGGVRIAPSVLSADLGRLSEQIERAVAGGADWLHVDVMDGHFV
                     PNLTFGAPMVRALRRLTSLPLDVHLMVERPEHYLGELADAGASVFTFHPEATIHVQRH
                     LATARQLGMLAGLAFNPSSPLSLLDEVLDDVDLVLIMSVNPGYGGQSYIPQSTDKLRR
                     ARALMDRRGSRAALEVDGGITGETIAEAWSAGADTFVAGTAVFGASDPGHAVRDLKRR
                     CAVRV"
     gene            complement(3774..4346)
                     /locus_tag="VGQ24_02015"
     CDS             complement(3774..4346)
                     /locus_tag="VGQ24_02015"
                     /inference="COORDINATES: protein motif:HMM:NF015734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HEV8453635.1"
                     /translation="MRARRHTPSPGPLFQSAAWRAFLRDMALIVGTFVLGYGLSALWL
                     SRGSVFSRDHSLPRVLELPEAQARTKLTDLGFRPRLDGQRTNDSFPQGTVIWQDPPAG
                     TVLEPNSVVQLTVSSGPSLVAVPDVIGLNVPQAGKILAAGGVRVGSVDTLPGGEERGV
                     VLATRPAAGVGRPRGAAINLVISRGPESGR"
     gene            complement(4343..5641)
                     /gene="rsmB"
                     /locus_tag="VGQ24_02020"
     CDS             complement(4343..5641)
                     /gene="rsmB"
                     /locus_tag="VGQ24_02020"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: protein motif:HMM:TIGR00563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HEV8453636.1"
                     /translation="MSTGLESRRAALTILGQVRDGKPFDVALDREIGPLPEPDRRLAH
                     ELAAGVLRQRSTLDAQLAPLVPRGWTSVAPDLQDILRLGAYQLTALARVPAHAAVDTS
                     VSLAKASGGPRAAGFVNAVLRRLTRSEAPIEAGGARDAVVLAEKYSHPLWLVRRWLEQ
                     FGTQGTEDLLRWNNTRPRLVIQPARGDLESLRAQLRASGVAVEPAPYEAGLMVSASRP
                     ADLPGYSDGQFVVQNPAQSLLARFADLPPGVAVYDVCAAPGGKTIALGRSARMVVAGD
                     VSHARARRLQKNLARAGSGQEHVIVADGRRPPVRPTNAVVMDVPCLGTGTFARHPDAR
                     WRVTPEALDSLVRLQVELLDRSAAVVAPGGLLVYSTCSLEPEENRLQVERFLQVHPEF
                     RREASSAVSPDLLSPEGDLMVLPHQHGIDGAYAARLRRSG"
     gene            complement(5654..6460)
                     /locus_tag="VGQ24_02025"
     CDS             complement(5654..6460)
                     /locus_tag="VGQ24_02025"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF017501.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990107 - thiazole synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HEV8453637.1"
                     /translation="MTGTFAATEASTDLPLTIGGRSFRSRLMVGTGKYRDNGEMARAI
                     EASGAEIVTVAVRRVDLDRTKAEGILYHLSPDQYFLLANTAGCYTADEAMRYARLARE
                     AGFNEFVKLEVIGDRETLLPDTQGLLTATRELAREGFTVLAYTNDDLITALRLEDAGA
                     AAVMPLASPIGSGLGLLNPYGIRIIKSRLSVPVIVDAGVGTASDACLTMEQGVDGILM
                     NTALAEARDPAVMASAMRLAVDAGRSAYLAGRMPRREVAVPSSPVAGMLE"
     gene            complement(6529..6738)
                     /gene="thiS"
                     /locus_tag="VGQ24_02030"
     CDS             complement(6529..6738)
                     /gene="thiS"
                     /locus_tag="VGQ24_02030"
                     /inference="COORDINATES: protein motif:HMM:TIGR01683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HEV8453638.1"
                     /translation="MIELEILVNGEPRRVPGPATAADLLRHLGLDARTVVVELNRQIV
                     RRPHLGDTVLANGDAVELVHFVGGG"
     gene            complement(6735..7340)
                     /locus_tag="VGQ24_02035"
     CDS             complement(6735..7340)
                     /locus_tag="VGQ24_02035"
                     /inference="COORDINATES: protein motif:HMM:NF014622.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEV8453639.1"
                     /translation="MHAFTDADLLALPEFGIRAAAIAAAGPAVALHARARGAPAALLS
                     AGALRIAALARPPEAAVFVNGRPDIAAAVGAHGVQLGRGDLAPADARRLLPRGWIGRS
                     VHTPEEAAMAVSEGADFLVVGNIYETLTHPGRPAAGLTLVTQAAGLGRPVIAIGGITP
                     ERAAEVKAAGAYGVAAIRGLWMAADPAAATLAMLWPWTSDT"
     gene            complement(7355..8278)
                     /gene="fmt"
                     /locus_tag="VGQ24_02040"
     CDS             complement(7355..8278)
                     /gene="fmt"
                     /locus_tag="VGQ24_02040"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEV8453640.1"
                     /translation="MRILFFGTPAFAVASLRALLRERFTIAGVVTQPDKPQGRSRSEL
                     IPPPVKVFAQAQGIPVLQPVRPVGDVFATSLRRLEPDLGIVVAYGHILRPEILAIPPH
                     GMINVHASLLPRYRGAAPIQHAILRGEAETGITIMQMEAGLDSGPTLHRVATAIGPDE
                     TAGQLAERLAELGGAALIEALSLISGGLARPQPQDDARATFAPKIDKEMARLVWERDA
                     ATLVRQVRAFDPSPGAWTTLNGGVLKLFTAREVPGTGDPGDVLAAGERLVIAAARGAV
                     AVNEVQPAGKTRLPVEAWVRGRGVAAGQRLE"
     gene            complement(8278..>8844)
                     /gene="def"
                     /locus_tag="VGQ24_02045"
     CDS             complement(8278..>8844)
                     /gene="def"
                     /locus_tag="VGQ24_02045"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: protein motif:HMM:NF001159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEV8453641.1"
                     /translation="RLHRPGSPFGMSPLPLHLLGSPVLRQHSAEVKIVDEEVRRLVDA
                     LFETMDAARGVGLAANQVGVARRVAVVDADGDRFAMIDPTIIEAEGRATAEEGCLSIP
                     DVYGEVTRPERVVIEALDPEGNRYRKEATGLKARAIQHEIDHLDGILFLDHLSLIRRQ
                     MLLARWRREHKDDTGFIKEASAASVRSE"
BASE COUNT         1555 a         3038 c         2891 g         1360 t
ORIGIN      
        1 gtggcggctc gctaaagtgc gccttggtcg gcggacggct agccggtctg gcgcagagca
       61 atggctggtc aggagtgatc ctgaacggct gcatccggga cgcggtcgag atccggcaac
      121 ttcgggtggg gatacgggcg ctcaatgccg tgcccctgcg gagcgggaaa aacggtgccg
      181 gcgagcgtgg aggcacgttg agcttcgccg gggtcacctt cgctcccggc cgtttcgtct
      241 acgcggatgc cgacggagtg ctcgtggctg aacgcgatct gcttcaatag gccggcgccc
      301 ggcacgaaaa tgcgagcggc ccgtcactga cgggccgctc gcgtagagag tggtagatcg
      361 ccccctgagt ttacggagac aggccgaagt gcccgctcca cccttcttcg acctaccact
      421 tttcagttga agtcggttcg acttcccggc cttactaagg caggttcggt gccagcgtgc
      481 agtttttcgc taagtccttg atacataaga gaaaggggac cgtcgcgggg ccccttggcc
      541 aagccgaaat atgtacagga actatgcagt gccagcgaat gatctggtaa tgcattcagg
      601 acaaaagact tagggcaacc gtctatctct ttgacgccgg gctcctgctg ccggtctcca
      661 ggtagcttcc agcctctggg ctggggcccc tgcgccacat cgccatcagc accgttccaa
      721 gggcgacgag aatcacgctg gtgagttggg cgatcgtgaa cggtcccagc aggcggtcgt
      781 ccttggcccg cagaatctct acgaggaacc gctcgatccc cgcaaacacg agatacactc
      841 cgaacagcca gcctaccggc cggcccttct tccgtagcac ccacaacacg gcaaagacca
      901 ccagcatcgc cgccacctca tagagctggg tggggtgcac ggtcagcacc gtcgagggat
      961 ctatcccggg ggatacgctg accccgaagc cgtggaggtt ggcagcggtt gacggtggag
     1021 aaccgttcgg gaacttgacc ccccagggaa gattggtcgg gcctccgtag tcgtcgttca
     1081 ccagaaaaca cccgaccctg ccgagcgcgt aggccgcggc gagagctggc gcggcgagct
     1141 gcatggtcca gcgaagcgga acccggaggc gccagccgtt gaggatgacc gccagcgcgc
     1201 ccccgatgaa tcctccgtac cagaccaggc caccccgcga aaagagggcg ccaggatccc
     1261 gggtgagcgc gacataccag agcttggccc caatgatgcc gccgataacc gcagccgcga
     1321 cgatgtcggc cgcgtagtcc tcccgcaggt tgttctcccg cagctggcgc gcgatcagcc
     1381 agcctcccat cagaaaggcg accatcaaca tcaggccgta acccgtgatc tcgagaggtc
     1441 ccagatggat gatgaacggg taaacggtca tgatgtggat ccgtgtgagt gaaaactgat
     1501 gccggggagg ggcagatcgt cgcgcggctc caggtcccag ccgcttcgct ccccgcgtgc
     1561 gagccgccag gccccagccg cagcgatcat ggcggcgttg tctgtgttga gccgcgggga
     1621 agctacgctc accctggccc gtcccgccag ccggtcccgg agcccggtgg cgagcgcctg
     1681 attgcaggcc acccccccgc caatcatcgc gcggctatat ccagtcgcct ccaccgcgtg
     1741 ggccgtcttt gcgatcagca cctcgagcgc agcgtcctgg aagccgcggg ccaggtcggg
     1801 ccttgccccg gctaggccat caccggatgc gcccgccgtc tcggcagccc gcaccgcgcg
     1861 gagaaccgcg gtcttgagcc cactgaacga gaaggcgtac cggttgggcc cgtcctgctc
     1921 gagctcggag agcatagggc tgggaagccg atagcggcga ggccgtccct cacgcgccaa
     1981 ccgttcgatc gccgctcccc cgggataccc gagtcccagc aagttggcca ccttgtcgaa
     2041 tgcctcaccg gcagcatcgt ccagtgtctg gcccagcagg cggtactcac cccaggctgg
     2101 tacgtcgagc agcatggtgt gccctccgct caccagcagg ccgatgaagg gtggcacgag
     2161 ctccgaatcc tccagcgtcg gggcgaagag atgcccctcc agatggttga ccccgatgag
     2221 cgggcgatcc aggctgaacg cgagcgtctt tccgtacatc accccgacca gcaatgcgcc
     2281 gaccaggccg gggcccgcgg ttaccgcgac tccatccacc tgggagaggg tgatgcccgc
     2341 gtccgagagc gcgcggtcaa ccaccgatcc catggcctgc acatgagccc ggctggcaag
     2401 ctcgggcacg acacccccaa aaatccggtg cacatcctgg gacaggatga ccagcgaggc
     2461 gagggatcta agcccgttat ctgatcggag aacggctgcg gaagtctcgt cgcaggagct
     2521 ctcgatgccc aggatccact cggtcacatg gcgctcgctg ccctacccgg gctcatccag
     2581 gaggcgctcg atcagggcgc ggttcacggc cgagttccag tcgtgggcac cgatcacccg
     2641 cttcacgatc acgccctggc gattgagcag gaagctctcg ggcacgcccg tcgtctggta
     2701 aatctcctgc actttggtcg tgcgatcctg gagaatatca aagctcagcc ccagctcccg
     2761 gccgaaagcc tgaacgtcct ccgggctccc ctcatcgatg ctcactgccg caatcctgaa
     2821 cccgcggggg gccagcgact gatacagctt ttccatggcc ggcatctcaa cccggcaggg
     2881 gacgcaccac gtggcccaga cgttcaccag ggtgacagtg ccgcggtagc gttcccgaag
     2941 tgagaccgag tcgccggtag cgagatcgac ggcgcggaag tccggggcgc ggcccccgac
     3001 gtcgacgctc tgcacgtccg gaccgtactt ggccagagct accgctccgg cgagaagtcc
     3061 ggccacaaca atcccgacca ccatccattg cctggacatg agtgcctaca cccgcacggc
     3121 gcagcgccgc ttcaagtcgc ggacagcgtg acccggatcc gacgccccaa acacggcggt
     3181 tccggccacg aaggtgtcag cgcccgcgct ccatgcttcc gcaatcgttt ctccggtgat
     3241 gccgccatcc acctcgagcg cggcgcgcga gccgcgccgg tccatgagcg cgcgggcgcg
     3301 ccggagctta tcagtggact gggggatgta ggactggccg ccatatcccg ggttcaccga
     3361 catgatcaag accagatcga cgtcatccag tacttcatcc aatagcgaga gcggactcga
     3421 tggattgaac gccagcccgg ccagcatgcc gagctgccgg gcggttgcca gatgacgctg
     3481 aacgtgaatg gtggcctccg ggtggaaggt gaacacgctg gcacccgcat cggcgagctc
     3541 gccgaggtaa tgctcgggac gctccaccat gagatgcacg tcgagcggta agctggtcag
     3601 gcgcctcaac gcgcggacca tcggggcgcc gaaggtgaga ttggggacga agtgcccgtc
     3661 catcacatcc acgtgcagcc agtccgcgcc gccggcgacg gctcgctcga tctgctcact
     3721 gagccggcca agatcggcac tcaggacgct cggggcgatt cggacaccgc ccgtcatcgc
     3781 ccgctctccg gcccacggct aatcacgagg ttgatcgccg caccgcgtgg ccggccgacg
     3841 cccgccgcgg ggcgggtcgc gagcaccacg ccgcgctcct ctccgcccgg cagggtgtcc
     3901 accgagccga cccggactcc gcctgccgcc aggatcttgc ccgcctgggg cacgttgaga
     3961 ccgatgacat caggcacagc gaccagcgag ggccccgagc tgacggtgag ctgcaccacg
     4021 ctgttgggct cgagcacggt accagctgga gggtcctgcc agatgacggt gccttgcgga
     4081 aacgagtcgt ttgtgcgctg gccgtccagc cgggggcgaa agccaagatc agtcagcttc
     4141 gtgcgggcct gcgcttcggg gagctcgagc acgcggggca aggaatgatc gcggctgaag
     4201 accgaccctc gggacagcca gagcgccgag agaccatagc ccaggacgaa cgtccccacg
     4261 atgagggcca tatcgcggag aaaggcgcgc cacgccgcgg actggaagag cggtccgggc
     4321 gagggcgtgt gtcgccgggc tctcacccgc tccgcctgag acgggcagcg taggcaccgt
     4381 caatgccgtg ctggtggggc agaaccatca agtcgccctc gggcgagagc aggtcagggg
     4441 agactgcgct gctagcctcc cgacggaact ccgggtgtac ttggagaaac cgctccacct
     4501 gtaaccgatt ctcctccggc tccagcgagc aggtcgagta gaccagcaac cccccgggcg
     4561 ctaccaccgc cgcagaccga tccagcagtt cgacctggag ccgcaccagg ctgtccaggg
     4621 cctcgggtgt cacccgccag cgggcatcgg ggtgcctggc aaatgtgccg gtgccaagac
     4681 aagggacatc catcaccacg gcattcgtcg gccgaaccgg tggccgtcgc ccgtcagcca
     4741 cgataacgtg ctcctgcccg ctccctgcgc gggcgagatt tttctggagc cgccgtgccc
     4801 gagcgtgact gacatcccca gcaacaacca tccgagccga ccggcccagc gcgatggtct
     4861 tcccgccggg agcggcacac acgtcgtaca cggccacccc cgggggcaga tcggcgaagc
     4921 gcgccagcag tgactgggcc gggttctgca ccacgaattg cccgtcgctg tagccgggca
     4981 ggtccgcggg ccggctcgcg ctcaccatca ggccggcctc gtagggcgcc ggttccaccg
     5041 cgactccact ggcccgcaac tgagcgcgga gcgactcgag gtcccctcgc gccggctgga
     5101 tcaccagacg ggggcgcgtg ttgttccagc gcagcagatc ctcggtcccc tgggtcccga
     5161 actgctcgag ccagcggcgt accaaccaga gggggtggga atacttctcc gcgagcacta
     5221 ccgcatcgcg agcaccaccc gcttctatcg gggcttccga tcgggtcagc cttcgtagta
     5281 ccgcgttgac gaagccagcg gcgcgcggac cgccgctggc cttggcgagc gacacgctgg
     5341 tatccaccgc tgcgtgcgcc ggcacccgtg cgagcgcggt gagctgatac gcgcccagcc
     5401 tgaggatgtc ctgcagatcg ggtgcgacgc tggtccagcc gcggggaacc agcggggcca
     5461 gctgcgcgtc cagcgtgctc cgctgtcgca ggacgccggc cgccaactca tgtgccagcc
     5521 ggcgatcggg ctccggcagc ggtccgatct cccgatcgag cgcgacgtca aatggctttc
     5581 cgtctcgaac ctgaccgagg atggtcaggg ccgcgcggcg agactcgaga ccggtagaca
     5641 gggcgaccgt gctctactcc agcattccag ccacagggct ggacggcacg gctacctcac
     5701 ggcgaggcat gcggccggcc aggtacgccg agcgaccggc gtccaccgcc agacgcatgg
     5761 ccgacgccat gactgccgga tcgcgggctt cggccaacgc ggtgttcatc agaattccgt
     5821 ctacaccctg ctccatggtc aggcacgcat ccgatgccgt ccctacgccg gcatcgacga
     5881 tcacggggac ggagagccgg ctcttgatga tgcgaatgcc gtagggattg agaagcccca
     5941 gaccgctgcc gatcggcgac gccagcggca tcaccgcggc cgcgccggcg tcttccagcc
     6001 gtaacgcggt gatcaggtcg tcgttggtgt acgccagaac ggtgaagcct tcgcgcgcca
     6061 gctcgcgcgt ggcggtcaac aggccctgag tgtcgggcag gagcgtctca cgatcgccga
     6121 tcacctcgag cttcacgaac tcgttgaacc ccgcctcccg agccagtctc gcatagcgca
     6181 tcgcctcatc ggcggtgtag caaccggcag tgttggccag caggaagtac tggtccggac
     6241 tgagatggta gaggatccct tcggccttgg tccgatccag atccacccgc cgaactgcca
     6301 ccgtgacgat ttcggcgccc gaagcctcga tcgcccgcgc catttcgccg ttgtcgcggt
     6361 acttgccggt gcccaccatg agccgcgaac gaaaactccg acctccaatg gtgagcggga
     6421 ggtcggtgga ggcttcggtt gccgcaaagg tgccggtcat gcgtgtcctc ggtctatgtg
     6481 cctgtcagaa tgacaattct tgtgcctctc aaacataacc acgccacctc atcctccccc
     6541 aacgaaatgc accagctcca ccgcatcccc attggccaga acggtgtcgc ccagatgggg
     6601 ccgccgaacg atctgccggt tgagctcgac caccaccgtg cgcgcgtcga gcccgagatg
     6661 ccggagcagg tcggcggcgg tagcggggcc ggggacacgc cgaggctccc cgtttaccag
     6721 gatctcgagc tcgatcatgt gtcgctcgtc cagggccaga gcatggccag cgttgccgct
     6781 gcgggatcgg cggccatcca gagccctcgg atcgcggcca ccccatacgc gcccgcggcc
     6841 ttcacctcgg ccgcacgctc gggcgtgatt ccaccaatgg cgatcaccgg gcgcccgagg
     6901 cctgctgcct gggtgaccaa ggtcaagccg gcggcagggc gacccgggtg ggtcagggtc
     6961 tcgtagatgt tgccgacgac caggaagtcc gcgccttccg agaccgccat cgccgcttcc
     7021 tccggagtat gcaccgatcg gccgatccaa cctcggggca ggagtcgcct cgcatccgcc
     7081 ggtgcgagat cgccacggcc gagctgaacg ccatgcgccc cgaccgccgc cgcgatgtcc
     7141 gggcgaccgt tcacgaacac cgcggcttca ggcgggcgtg ccagcgccgc tatacgtaat
     7201 gcgcccgcgg aaagcagtgc ggcgggtgcg ccccgtgcac gagcgtgcag ggcgactgcc
     7261 gggcccgcag cggcgatcgc tgctgcgcgg atgccgaact cggggagtgc cagaagatcg
     7321 gcatcggtga aggcgtgcac ccgaggcaat ggcctcactc cagccgttgg ccggccgcga
     7381 cccctcgtcc gcgtacccaa gcttctaccg gcaggcgggt cttgccggcg ggctgcactt
     7441 cattgacagc gaccgctcct cgggccgctg cgattaccag acgctcgccg gcggccagca
     7501 cgtcgcccgg gtcaccagtg ccgggtacct cccgggcggt gaacagcttc aggactcctc
     7561 cgttcaacgt ggtccacgcg ccaggcgacg ggtcgaaggc gcgaacctgc cgcaccaggg
     7621 tcgccgcgtc tcgttcccac accagccgtg ccatctcctt gtcaatcttt ggggcaaacg
     7681 tggcgcgcgc gtcatcctgt ggctgaggcc gggccagacc gcccgagatc agagaaagcg
     7741 cttcgatgag ggcggcgcct cccagctcgg ccagccgttc ggccaactgt cccgccgtct
     7801 catcgggtcc gatggcagtg gcaacccggt ggagggtggg cccgctgtcc aggccggctt
     7861 ccatctgcat gatggtgatt cccgtctcgg cttcaccccg gagaatagcg tgctggatgg
     7921 gcgccgcgcc gcggtagcga ggaagcaggg aggcgtggac gttgatcatg ccatgcggtg
     7981 ggatcgccag gatctcgggg cggagaatgt gcccgtaggc aaccacaatc cccaggtcgg
     8041 gttccaggcg ccggaggcta gtggcgaaca cgtcgcccac cgggcgcacg ggctggagca
     8101 ccggaatgcc ctgagcctga gcgaacactt tgaccggtgg tgggatcagc tcggagcggg
     8161 agcgtccctg aggcttgtcc ggctgggtga cgacgccggc gatggtaaac cgttcgcgga
     8221 gcagcgcgcg cagggatgcc acggcaaagg ccggcgtccc gaagaaaaga atccgcatca
     8281 ctccgaccgg actgatgccg ccgacgcctc tttgatgaag cctgtgtcgt ccttgtgctc
     8341 ccggcgccaa cgtgccagga gcatctgccg ccggatcagg ctgagatgat cgaggaaaag
     8401 gatgccatcg aggtgatcga tctcgtgctg gatggcgcgc gccttcaggc cggtcgcctc
     8461 cttgcggtat cgattcccct cgggatcgag tgcttcgatc accacgcgtt cgggccgggt
     8521 aacctcacca tagacgtcgg ggatcgagag gcagccctcc tcggcggtgg cgcggccctc
     8581 ggcctcgatg atggtggggt cgatcatggc aaaccgatcg ccgtcggcat cgaccaccgc
     8641 cacccgccgt gccacgccga cctggttcgc cgccagacct acaccacgcg cggcatccat
     8701 ggtctcgaaa agagcgtcga ccagacgacg gacctcctcg tccacgatct tcacctcggc
     8761 actgtgctgc cggaggaccg gcgagccgag aaggtggagc ggcaacgggc tcatgccgaa
     8821 gggggaaccg ggccggtgga gtct
//
LOCUS       DASYRV010000088         2986 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2110929, whole genome shotgun sequence.
ACCESSION   DASYRV010000088 DASYRV010000000
VERSION     DASYRV010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2986
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2110929"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..576
                     /locus_tag="VGQ24_02050"
     CDS             <1..576
                     /locus_tag="VGQ24_02050"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEV8453642.1"
                     /translation="GSAMRRVRIVLLVVIVLPILVGGLVLLMAGRPVAFEILRWRTER
                     RFPDVKWLNSEQLARWRTNRAEPQPVLLDARTEAEFGVSRLKGAMRIDPYRPSLRPLR
                     GFRKDTAVMVYSSAGYRGARVANWLGRVGYTNVHNLSGGIFAWVNEGRPIFRGETPTA
                     QVHPYDQKWGYLVDGKYRAEAPNLEKHSAAP"
     gene            749..1066
                     /locus_tag="VGQ24_02055"
     CDS             749..1066
                     /locus_tag="VGQ24_02055"
                     /inference="COORDINATES: protein motif:HMM:NF013964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease signature motif containing
                     protein"
                     /protein_id="HEV8453643.1"
                     /translation="MQSHRDWLLGLHGPVCAYCGTETSDEAITLDHVRPRRGQTAYDR
                     PDNLVLACRDCNAAKADTPLVAFLMQRRSRGVFLLHYGEHLSEPLRELAQQASERPLA
                     DRE"
     gene            complement(1111..>2986)
                     /locus_tag="VGQ24_02060"
     CDS             complement(1111..>2986)
                     /locus_tag="VGQ24_02060"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: protein motif:HMM:NF006914.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HEV8453644.1"
                     /translation="DGRARAKQTQRRGRDAHHDPTAALPVAIHGDAAFAAQGVVAETL
                     NLGSLKGYRTGGTLHLITNNQVGFTTDMEDARSTRYASDLAKGFDIPIVHVNADDAEA
                     CLSAVRLAMAYRDGFHQDFVIDLVGYRRHGHNEGDEPAYTQPLMYERIKNLPSVRELY
                     ARTLIEAGVITQEEADREAAQAYQRLVDIQQAFKASMGRITTEERPVRLSGPGQEVET
                     ALAPEFLRALNEQLHSWPEGFAVHPKLRKQLERRRAALGPDGGIEWAHAEALALGSLL
                     TEAVPVRFTGQDTERGTFSQRHLVLHDVNTGATTAPIRTLPGALAPIELHNSPLSELA
                     TLGFEYGYSVAAPEALVLWEAQFGDFVNAAQVIVDQFISAGLAKWGLTTRLTLLLPHG
                     YEGQGPEHSSARMARFLHLAAEGNIRVANCTTPAQYFHLLRRQAKRSRQRPLVLFTPK
                     SLLRHPLATSRLEDLATGHFQPVIDDAFFGKNPERAKRVLMCTGKVFYDLLPEAEKLG
                     EDRPAIVRLEQLYTFPWAELRQVLPRYRGATELIWVQEEPLNMGAWRYLEAKLRELVA
                     EGHDMQIRYVGRPERASPAEGYPAAHTAEQNRIIREALQSAGAGGPLETVEKAGKAQA
                     "
BASE COUNT          488 a          956 c          968 g          574 t
ORIGIN      
        1 ggttcggcaa tgcgtcgcgt gaggatcgtg ctgctggtcg tgatcgtgct gccgattctg
       61 gtgggtggtc tcgtgctgct gatggccggc cggccggttg cgttcgagat cctgcgctgg
      121 cggaccgagc gcagattccc cgacgtgaaa tggctgaatt cagagcagct ggcgcgctgg
      181 cggaccaatc gagccgagcc tcagccggtg ctcctcgacg cccgaacgga ggccgagttc
      241 ggggtaagcc gtctcaaggg tgccatgcgg atcgacccgt accggcccag cctgcgacca
      301 ctccggggat tccgcaagga tacggcggtg atggtctact cttcggcagg gtatcggggc
      361 gcccgggtcg ccaactggct cggcagggtg ggctatacca acgtgcacaa tctctccggc
      421 ggtatcttcg cctgggtcaa tgaaggtcga cccatcttca ggggagaaac gcccacggcc
      481 caggtccacc cgtacgatca aaagtggggg tacctcgtgg atgggaagta ccgcgcggag
      541 gccccgaacc tcgaaaagca ctccgcagcc ccatgaaaat cgccaagtct gtcattttgg
      601 cgtcaatctt gctaggtttc cctcacgtag tttcccggcc tggaagatca ggcccctatt
      661 aacctttgct tggtattctg tggcacgacg aactcgaaga cattctgcag tttccgtccc
      721 cagcttccgc cgttcccctg gtcgatccat gcagtcgcac cgcgattggt tacttggtct
      781 gcacggcccc gtctgcgcat attgcggcac ggagacgagc gacgaggcga tcacgctcga
      841 ccatgttcgg ccccgccgag gtcaaacggc ctatgaccgg cccgataacc tggtgcttgc
      901 gtgcagggac tgtaacgcag ccaaggcgga cacgcccctg gtggccttcc tgatgcagcg
      961 gcgctcgcgg ggggtcttcc tcctgcacta tggagagcac ctctccgagc ccctcaggga
     1021 gttggcccag caggcctctg aacggccgct ggcggacagg gaataacgca gacaaaacgg
     1081 gcggcccgaa tcggccgccc ttttgatttt tcaggcctgc gcttttcctg ccttctcgac
     1141 ggtctccagc ggtccccccg ctcctgctga ttgcagcgcc tcgcggatga tccggttctg
     1201 ttcggccgtg tgcgccgccg gatagccctc agccgggctg gcccgctccg gacgccccac
     1261 gtaacggatc tgcatgtcgt ggccctccgc tactagctcc ctcagcttag cctcgaggta
     1321 tcgccaggcg cccatgttga gcggctcctc ctgcacccag atcagctcgg tcgcaccgcg
     1381 atagcggggg agcacctgcc gcagctcggc ccaggggaag gtgtagagct gttccagccg
     1441 gactattgcc gggcgatcct cgccgagctt ttccgcctcc ggcaggaggt cgtagaagac
     1501 cttgccggta cacatcagca cccgtttggc gcgctccgga ttcttcccga aaaacgcatc
     1561 gtctatcacc ggctggaaat gtccggttgc gagatcctcg agccgcgagg tggccaacgg
     1621 atgacggagt aggctcttgg gcgtaaacag gactagtggc cgctgccggg agcgcttggc
     1681 ctgccgccgc agcaagtgga agtactgcgc cggagtggtg cagttggcca ctcgtatgtt
     1741 gccctcggcc gccagatgaa ggaagcgggc cattctggca ctggaatgtt cggggccttg
     1801 accctcgtat ccatgcggga gcagaagcgt gagacgagta gtgagtcccc acttggccaa
     1861 tcccgccgat atgaactgat cgacgatgac ctgggctgcg ttcacgaaat cgccgaactg
     1921 ggcttcccag agcaccaggg cttccggcgc ggcgacgctg tagccgtatt cgaagcccag
     1981 ggtcgcgagc tcggataacg ggctgttgtg cagctcgatg ggcgccaagg caccggggag
     2041 ggtccggatg ggagccgtgg ttgccccggt gttcacgtcg tgaaggacga gatgccgctg
     2101 actgaacgtg cctcgctcgg tgtcctgtcc ggtgaagcgc accggcacgg cttcggtcag
     2161 gagcgagccc agggccagcg cctcggcgtg agcccactcg attcctccat ccgggccaag
     2221 ggcggcgcgc cggcgttcga gttgcttccg aagcttcggg tgaaccgcga agccttcagg
     2281 ccagctgtgg agttgctcgt tcagcgccct caggaactct ggcgcgagcg cggtctcgac
     2341 ttcctgcccc ggcccgctca gccgaactgg acgctcctct gtggtaatcc gtcccatact
     2401 ggccttgaac gcctgctgga tatccaccag gcgctggtac gcctgggctg cctcgcggtc
     2461 ggcctcttcc tgggtgatga cacccgcttc gatcagagtg cgcgcgtaca gctcgcgcac
     2521 gctcggcaga ttcttgattc gctcatacat gagcggctga gtatacgccg gctcatctcc
     2581 ctcgttgtgg ccgtggcggc ggtacccgac caggtcgatg acgaagtcct ggtgaaaccc
     2641 atcccgatag gccatggcca gccggactgc cgagagacag gcctctgcgt cgtcggcatt
     2701 gacgtggacg atcgggatgt cgaaaccctt ggccaggtcg gacgcatatc gggtggagcg
     2761 ggcatcctcc atgtccgtgg tgaacccgac ctgattattg gtgatgaggt ggagcgttcc
     2821 gccggtgcgg tatcccttga gggagcccag gtttagggtc tccgccacca ccccctgggc
     2881 ggcgaaggcc gcatcgccat gaatggccac aggcagggcc gcggtcggat catggtgggc
     2941 gtcccggcca cgccgctggg tctgcttggc tcgggcccgc ccgtct
//
LOCUS       DASYRV010000089         5479 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1695442, whole genome shotgun sequence.
ACCESSION   DASYRV010000089 DASYRV010000000
VERSION     DASYRV010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5479
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1695442"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..708)
                     /locus_tag="VGQ24_02065"
     CDS             complement(<1..708)
                     /locus_tag="VGQ24_02065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HEV8453645.1"
                     /translation="MPFKHIGWLLLALAGAVAWGVLALHRGETVSAAWLVLAAVGTYL
                     LAYRFYSRFLADRVFGLNDRRATPAERLANGRDFVPTQRWVLFGHHFAAIAGAGPLVG
                     PVLAAQFGYLPGTIWIVFGVVLGGAVQDFVILFGSMRRDGKSLGQMAKEETGPVTGLL
                     AMVAVLAIMVILLAVLALVVVNALKDSPWGVFTILCTIPIAILMGFWMKIWRPGRTLE
                     ASALGVVLLMAALVGGRY"
     gene            894..1760
                     /locus_tag="VGQ24_02070"
     CDS             894..1760
                     /locus_tag="VGQ24_02070"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEV8453646.1"
                     /translation="MPLPSFGFGHRPSWEYESPEASGTALEEPRPQPISKGWRGKVAI
                     VTGGATGLGRHISMEFARLGCHVGFCFVNMPGRDVSEQALLTETALTAMGIEVHARRC
                     DVRDREAVVQFVAEVKQRLGGVHILINNAGIASDGALWRLSQQAWSEVLDTNVTGAFN
                     CIRAVAPIFRSQHYGKIVSVSAHQAERPGFGVANYAASKAALLGLTRAAAVELGPANV
                     NVNAVAPGFIRTERMGMLPSEVIERAQKSSVLGRVAEPDDVAHVISFLCSESARHITG
                     QTIVVDGGLSLE"
     gene            1834..2475
                     /locus_tag="VGQ24_02075"
     CDS             1834..2475
                     /locus_tag="VGQ24_02075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453647.1"
                     /translation="MILVTLAAPACAKAQQPEPQPQRQAETLPPVAALPVQALAGKTV
                     GVLPLTLLVADPTLQSDPVYTEYKDRRGGLRRADSLISEALVGRGPEVHWVLPPELRK
                     MARRAAGFVPDPDEMGQAVLRAPKLMVIPDPLRSSLRSLLAIADGRVALVPAALGFGP
                     EPDGRIRADLSLVVGDARTGKVMWRSLAQGRGKTPDEALSAALAAVLPSAGGT"
     gene            2472..3488
                     /locus_tag="VGQ24_02080"
     CDS             2472..3488
                     /locus_tag="VGQ24_02080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate dehydrogenase family
                     protein"
                     /protein_id="HEV8453648.1"
                     /translation="MTYDVTLIPGDGIGPEITAQTVKVLQATGLRFNWDEELAGVAAV
                     EATGTPLPDATIESIRKNALALKGPLTTPVGTGFRSVNVGLRKEFELFANIRPARTIV
                     PGGRFENVDIVLVRENLEGLYVGVEHFIAIGDDPRAVGESMAIVTRRGCERIIRYAFE
                     YAVKHGRRKVTIVHKANILKMVSGLFLEVGRAIAKEYEGKVESNDMIVDNTAMQLVLR
                     PEQFDVMVTTNMFGDILSDEVSGLVGGLGLAPGANIGTKAAIFEAVHGSAPDIAGKGV
                     ANPSAQMLAAAMMLDHIGELERAQRLRDAIVTTIVRDGIRTRDLGGTAGTEEFGSAVA
                     KRAA"
     gene            3463..3756
                     /locus_tag="VGQ24_02085"
     CDS             3463..3756
                     /locus_tag="VGQ24_02085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453649.1"
                     /translation="MPLPSGLPEVPCVKCGRRIRGLGWGELCPDCLRERRRRANRLAH
                     RISLAATVLMAAYVAIRVTAVPMARLYGAIAVLATYIIVRRIATQVAMEYLPK"
     gene            3846..5237
                     /locus_tag="VGQ24_02090"
     CDS             3846..5237
                     /locus_tag="VGQ24_02090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453650.1"
                     /translation="MALLLISTAPLPRPTSWVPLPAAPLLHAQTSLTIYNDGRVLVRR
                     TLRAAIPKGASTQRLTLGALDPATLFSLDSTVNIERVSYDGAVDEASVLRRSVAKRLI
                     FRLSDPRDTVSALVLGVDPLRLQLPDGRISFSPPGLALYPSDVVVVEPTAVIGVQSSR
                     GQDQIRLGYFTTGASWQASYQVVLGRNDARVTGMAVLPSDSLRAENAEIHLLAGSVNR
                     AQPPGPPRPLMRKEAGLAAGIAMSDAATEQKVGEFHLYSLPGRSTLLPGLTTSVGLFD
                     PAEVKYERNYVVHGDVPYWGFLPQMGEETEPPVEVIYTLKRPRKSDFGDRPLPGGVAR
                     LYLPDSSGGLQLVGEASLNHTPAGSDVKLNAGNAFDITAKRLQMNYATRRDSTKARGM
                     HTVATADYRVTLKNATDSAVTVDVEEERAGEWSVVSSSVPLEKVSSTISRFRVRVPAR
                     GEAVLTYRIRVIW"
BASE COUNT          948 a         1810 c         1826 g          895 t
ORIGIN      
        1 gtatctacca cccaccaggg ctgccatgag gagcaccacg ccaagagcgg aagcctcgag
       61 cgtgcgtccg ggccgccaga tcttcatcca gaaacccatg aggatggcga tggggatggt
      121 acagagtatg gtaaagacgc cccaggggct gtcctttaag gcattcacca ccaccagcgc
      181 cagcaccgcc agcagaatca ccatgatggc caacaccgcc accatcgcca ggagaccggt
      241 gaccgggccg gtctcctcct tggccatctg ccccagtgac tttccgtccc gcctcatgga
      301 gccgaagaga atcacgaaat cctggaccgc cccacccaga accacgccga agacgatcca
      361 gatggtgccc ggcaaatagc cgaactgcgc cgcgagcacg ggtccgacca gcgggccggc
      421 gccggcgatg gccgcgaagt ggtgcccgaa gagcacccag cgctgggtgg ggacgaagtc
      481 gcgcccgttc gccagccgtt cggccggggt ggcgcgccga tcgttcaggc cgaacacgcg
      541 atcggccagg aagcggctat agaagcggta ggccaggagg taggtgccta cggccgcgag
      601 cacgagccag gcggcgctga cggtctcacc ccggtggagg gccagaacgc cccaggccac
      661 ggccccggca agagcgagca gtagccaacc gatgtgtttg aagggcatgg attaacctac
      721 aaaagcgtga gcgggaaaag caaagcgtga gcggtgagcg ggaggcggaa acagttttag
      781 tggatccctc gctacgctcg ggatgaggag tccttcttgc actcgttccg cacattccgc
      841 cctttccgcc tcctccttgc cgctctctat ttctgcccgt accttcggat tccatgccat
      901 tgccatcctt tggcttcggc caccggccct cgtgggagta cgagagcccg gaggcgagcg
      961 ggactgcgct cgaggagccg cggccccagc caatcagcaa aggctggcgg ggaaaagtcg
     1021 ctatcgtgac cgggggcgcc accggtctcg ggcggcacat ctcgatggag tttgcccgcc
     1081 tcggctgtca cgtggggttc tgcttcgtga atatgccggg ccgtgatgtc agcgagcagg
     1141 cgctgctgac cgagaccgcg ttgaccgcca tgggcatcga ggtgcacgcc aggcggtgcg
     1201 atgtgcggga ccgcgaggcg gtggtgcagt tcgtcgccga ggtcaagcag aggctcggcg
     1261 gcgtccacat cctgatcaac aacgccggca tcgccagcga tggcgccctc tggcggctct
     1321 cccagcaggc ctggtccgag gtgctggaca ccaacgtgac cggcgccttc aactgtattc
     1381 gggccgtggc gcccatcttc cgctcccagc actacggcaa gatcgtcagc gtcagcgcgc
     1441 atcaggccga gcggccgggg ttcggggtgg cgaactatgc ggcgagtaag gccgcgctgc
     1501 tcggcctgac ccgggccgcg gccgtggagc tgggacccgc caacgtgaac gtcaacgccg
     1561 tcgcccctgg attcatccgg accgaacgca tggggatgct cccttccgaa gtgatcgagc
     1621 gagcccagaa gagctcggtc ttgggtcggg tagccgagcc ggacgacgtg gctcacgtca
     1681 tttccttcct ctgctcggaa tccgcgcgcc acatcaccgg gcagacgatc gtggtggatg
     1741 gagggttatc gttggagtga ttacctttcc gcacccttga agccccacga ccggtaccat
     1801 tcattgccca aatcatcgac ctgccgaagc ctcatgattc tggtgacgct ggccgctccc
     1861 gcttgtgcca aggcccaaca gcccgagccc caaccgcagc gccaggctga gaccttaccg
     1921 ccggtagcgg ccttgccggt ccaggcactc gccggcaaga cggtgggagt gctcccgctg
     1981 acgttgctcg ttgcggaccc cacgctgcaa tccgatccgg tctacaccga gtacaaggat
     2041 cgccggggtg ggctccggcg cgccgattcg ttgatcagtg aagcactcgt cggccggggg
     2101 ccagaggtcc actgggtcct tccccccgag ctgcggaaga tggcccggcg tgcggccggc
     2161 ttcgtcccgg accctgacga gatgggtcaa gccgttctcc gcgcccctaa gctcatggtc
     2221 atccccgatc cactccgctc gtcgctccgg agcctcctgg ccatagccga tgggcgggtc
     2281 gccctggtac cggcggcgct cgggtttggg ccggaacccg atggtcggat tcgggccgac
     2341 ctctcgctcg tggttgggga cgccaggacc ggcaaggtga tgtggcgctc gctcgcgcag
     2401 ggacgaggaa agacgcccga cgaggcgttg agcgccgcgc tggctgccgt gctcccgtcc
     2461 gccggcggca catgacctac gatgtaaccc tcataccggg agacgggatc ggacccgaga
     2521 tcaccgccca aacggtgaag gtgctgcagg ctaccggact tcgcttcaac tgggatgagg
     2581 agctcgccgg ggtggccgcc gtcgaggcca cggggacccc gctccccgac gccaccatcg
     2641 agagcattcg gaagaacgcc ctcgcgctca agggaccgct caccaccccg gtgggcaccg
     2701 gctttcgctc ggtcaacgtg ggattgcgga aggagttcga gctcttcgcc aacatccggc
     2761 ccgcccgtac catcgtgccg ggcggccggt tcgagaacgt cgacatcgtg ctggttcggg
     2821 agaatctcga gggcctctat gtcggcgtcg agcatttcat cgcgatcggg gacgacccac
     2881 gcgcggtggg cgagtcgatg gccatcgtga cccgccgggg ctgcgagcgc atcatccgct
     2941 acgccttcga gtacgccgtg aagcacggac ggcgcaaggt caccattgtg cacaaggcca
     3001 acatcctcaa gatggtcagc gggctgttcc tggaggtggg ccgcgcgatc gccaaggagt
     3061 acgaggggaa ggtcgaatcc aacgacatga tcgtggacaa cacggcgatg cagctggtgt
     3121 tgcggccgga gcaattcgac gtgatggtga cgaccaacat gttcggcgac atcctgagcg
     3181 acgaggtgtc tggcctggtc ggcggcctgg ggctcgcgcc cggggccaac atcgggacca
     3241 aggccgcgat cttcgaggcc gtgcacggga gcgcgcctga tatcgccggg aagggcgtcg
     3301 ccaatccatc ggcccagatg ctggcagcgg cgatgatgct cgatcacatc ggggagctgg
     3361 aacgcgccca gcgtctccgc gacgccatcg tgaccactat cgtccgggac ggtatccgca
     3421 cgcgcgacct cggcggaacc gccggcaccg aggagttcgg cagtgccgtt gccaagcggg
     3481 ctgcctgagg ttccctgcgt caagtgcgga cgccgcattc gcgggctggg ctggggcgag
     3541 ctctgtcccg attgcctgag ggagcgaagg cggcgtgcaa accggctggc ccaccgcatc
     3601 tccctcgcgg cgacggtgct gatggccgcc tacgtcgcca tccgggtcac cgcagtaccc
     3661 atggctcgcc tgtacggcgc tatcgccgtg ctggctacct acatcatcgt tcgccggatc
     3721 gccacccagg tcgccatgga gtacttgcct aaatgaggaa ccagaagcgg ggcggcgggg
     3781 cagcggggcg gcggggcagt cttatcccga acaaatgttc ttggtttggg ggatgtggtc
     3841 gcgttatggc gcttctccta atcagcaccg ccccgctgcc tagacccact tcgtgggttc
     3901 ccctccccgc tgccccgctc ctccacgccc agacctccct cacgatctac aacgacggcc
     3961 gggtactggt ccggcgcacg ctgcgggcgg ccatacccaa gggtgcctcc acccagcggc
     4021 tgacgctggg tgccctcgac ccggcgacgc tcttctccct cgattccacc gtcaacatcg
     4081 agcgggtctc ctacgatggt gcggtcgacg aggcgagcgt gcttcggcgt tcggtggcca
     4141 agcggttgat cttccggctg tcggacccgc gggataccgt cagcgcgtta gtgctcgggg
     4201 tcgatccgct gcggctccag ttgccggacg gacggatcag cttcagccca ccgggcttgg
     4261 cgctgtaccc gagcgatgtc gtggtggtcg agcccaccgc cgtcatcggg gtgcagagca
     4321 gcaggggaca ggaccagatt cgtctcggct acttcaccac cggcgcctcc tggcaggcca
     4381 gctaccaggt ggtgctcggc cggaatgacg ctcgggtaac cggcatggcg gtgctcccat
     4441 ccgactcgct cagggcagag aacgccgaga ttcatctcct cgcgggatcg gtgaatcggg
     4501 cacagccgcc cgggccgcca cggcccctga tgcgcaagga agcggggcta gccgccggga
     4561 tcgccatgag cgatgctgcc accgagcaga aggtgggcga gttccatctc tatagcctgc
     4621 ctggccggag caccctcctt ccgggcctga cgacgtcggt gggactcttc gatcccgcgg
     4681 aggtgaagta cgagcggaat tacgtggtgc atggggacgt gccgtactgg ggcttcctgc
     4741 cccagatggg cgaggagacc gagccgcccg tcgaggtgat ctacaccctg aagcgcccgc
     4801 gaaagagcga cttcggcgac cggccgctcc ccggcggcgt cgcccggctc tacctgccgg
     4861 acagctccgg tgggctgcag ctggtgggtg aggcgtcgct caatcacacc ccagccggca
     4921 gcgacgtgaa gctgaatgcc ggcaacgcgt tcgatatcac ggccaagcgg ctgcagatga
     4981 actacgccac ccgccgcgac agtaccaagg cgcgcggaat gcacaccgtg gccaccgcgg
     5041 actatcgggt gacgctcaag aatgccaccg acagcgccgt gaccgttgat gtggaggagg
     5101 agcgcgccgg ggagtggagc gtggtgtcga gctcggttcc gctagagaag gtgtcgtcca
     5161 ccatcagccg cttcagggtg cgggtgcccg cgcgggggga ggcagtgctg acttacagaa
     5221 tccgagtgat atggtaacct ttcagggtga tgtcatcctg aggaagcgaa gcgaccgaag
     5281 gatctctcgg ctcgcacacg gagagatcct tcgctgcgct caggatgaca tggggtgtcg
     5341 cggcccgtga gcaccgtcac catcgcccat ctctccgatc tccatttcgg cggcttcgcc
     5401 gatctcaagc agatcgaggc gctcgaagaa ttccttccca gcctcaacac gacggcgatc
     5461 gtcgtctcgg gcgacctga
//
LOCUS       DASYRV010000090         1731 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1488786, whole genome shotgun sequence.
ACCESSION   DASYRV010000090 DASYRV010000000
VERSION     DASYRV010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1488786"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(77..952)
                     /locus_tag="VGQ24_02095"
     CDS             complement(77..952)
                     /locus_tag="VGQ24_02095"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEV8453651.1"
                     /translation="MTASAPGAYEIDVQDIEYVRHGDKPLLARLFKPRGTGPFPLMVE
                     LHGGAWCRGDRLSDTAINEPLAQSGVVVAGLDFRMPPDAAYPASLADINYGIRWLKTR
                     ATELGSRPDMVGAMGNSSGAHQAMLGGMRPRDPRYAALPLPAGSAAVDATVRCVVMCS
                     SVIDPLARYHYAKKLKAGGPPYPEIVDRVLPCHDQYWETENAMAEGNPVLALERGEKV
                     ELPPVLYLQGTNDAAHPRVDLDRFVTHYRKAGGSLELELFEGETEGFIVRKAGSPAST
                     KAIERIIEFVHKQVG"
     gene            complement(1085..1234)
                     /locus_tag="VGQ24_02100"
     CDS             complement(1085..1234)
                     /locus_tag="VGQ24_02100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453652.1"
                     /translation="MIRKLPSGQYRLYSRKKDAKTGKRRNLGTFKTREAAEKHERAVQ
                     YFKRH"
     gene            complement(1266..>1731)
                     /locus_tag="VGQ24_02105"
     CDS             complement(1266..>1731)
                     /locus_tag="VGQ24_02105"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF018525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEV8453653.1"
                     /translation="AVPACRRVVQRDWMLPRLEEWLDTLARHVGDCEAPPILVAHSLA
                     CSLLAHWVARSGVRAKGALLVAPADVDSPAHTPDEVRSFSPMPLARFPFPSIVVASTD
                     DPFSTLSRGKLFARSWGSRLVVLTGAGHINADAGFGEWPQGRALLGELVSGS"
BASE COUNT          295 a          575 c          578 g          283 t
ORIGIN      
        1 agtcgagcag atccgcggca agatccctgc cccggtccat tcgcggaccc gcactccgcc
       61 ggaaaacgcg ccgagcttat ccgacctgct tgtggacgaa ctcgatgatc cgctcgatcg
      121 ccttcgtcga agcgggtgag cccgcctttc gtacgatgaa cccctccgtc tcgccttcga
      181 agagctccag ctcgagggag ccgcccgcct tgcggtagtg ggtgacgaag cggtcgagat
      241 cgacgcgcgg atgggcggca tcgttggtgc cttgcagata gagcacggga ggcagctcga
      301 ccttctcccc gcgctcgagg gcgagcacgg ggttgccctc ggccatggca ttctcggtct
      361 cccagtactg atcgtggcag ggcagcacgc gatcgacgat ctccgggtac ggcgggccgc
      421 cggccttcag cttcttggcg tagtggtacc gcgccagcgg atcgatgacg gacgagcaca
      481 tcacgacaca gcggacggta gcgtcgaccg cggccgagcc ggcgggcagg ggcaaggccg
      541 cgtagcgagg atcacgcggc cgcatcccgc caagcatcgc ctggtgcgcg ccactcgagt
      601 tgcccatggc gccgaccata tcgggccgac tgcccagctc ggtggcccgg gtcttgagcc
      661 agcggatgcc gtagttgatg tcagcgagcg atgcggggta tgccgcgtcc ggcggcatcc
      721 ggaaatctag ccccgccacc acgaccccgc tctgggccag cggctcgttg atggcggtat
      781 cgctcaggcg gtcgccccgg caccaggcac ctccgtgcag ctcgaccatg agcgggaaag
      841 ggccggtgcc gcgcggcttg aagagccgcg ccagaagcgg cttgtctcca tgacggacat
      901 actcgatgtc ctggacgtcg atctcatagg ccccgggggc gctcgcggtc atgtgggctc
      961 ctctcagaag ggaaagggtg acgtgtttcg ccaatacgtt gaacctcccg cttgtccagg
     1021 tcaaggaccc cgccaggtcg ggcactggca ctgggacaaa caaattggcc cagtgcccgt
     1081 tggctcaatg ccgcttgaaa tactggacgg ctcgctcgtg cttctcggcc gcttcacgcg
     1141 tcttgaacgt tcccagattt ctcctctttc ccgtcttggc atccttcttc cgggaataga
     1201 gtcgatactg tccagacggc agctttcgga tcatcgttcg cctcctcgaa gaaaggatac
     1261 gcgcctcagg acccgctgac cagctcaccc aggagcgcgc gtccctgcgg ccattcaccg
     1321 aatcccgcat cggcattgat gtgcccggcc ccggtcagaa cgaccaaacg gctgccccag
     1381 gaccgcgcga agagtttacc gcgagaaagt gtcgagaatg ggtcgtcggt gctcgccacc
     1441 acgatgctcg ggaatgggaa gcgcgcgaga ggcatgggac tgaagctgcg cacctcgtcg
     1501 ggggtgtggg cgggcgagtc cacgtcggcg ggcgccacga gcagagcgcc cttggcgcgg
     1561 acgccggatc gcgccaccca gtgggccagc agcgagcagg caaggctgtg cgcgaccagg
     1621 atggggggcg cttcgcagtc gccgacatgg cgcgcgagcg tgtcgagcca ctcctcgagc
     1681 ctcggcagca tccaatcgcg ctggacgacg cggcgacagg cggggaccgc c
//
LOCUS       DASYRV010000091         9691 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3342046, whole genome shotgun sequence.
ACCESSION   DASYRV010000091 DASYRV010000000
VERSION     DASYRV010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9691
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3342046"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..590)
                     /locus_tag="VGQ24_02110"
     CDS             complement(<1..590)
                     /locus_tag="VGQ24_02110"
                     /inference="COORDINATES: protein motif:HMM:NF014759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453654.1"
                     /translation="MPNHNPPQLFLIDGYALIYRAFYAMISRPLRTAKGENTSAAWGV
                     VNFLLRLREKYRPDYVAWINDAGTSFREERYADYKSTREKLDQELQADFDRSVERICQ
                     LLEAFGIPIIAIRGYEADDVIGTLATAGAEQGLQSVIVSGDKDFYQLVGPRVSLLNPG
                     RGGPAAVDETWVDESNAGERLGVPPRQVADFLALVG"
     gene            complement(636..2075)
                     /locus_tag="VGQ24_02115"
     CDS             complement(636..2075)
                     /locus_tag="VGQ24_02115"
                     /inference="COORDINATES: protein motif:HMM:TIGR04514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GWxTD domain-containing protein"
                     /protein_id="HEV8453655.1"
                     /translation="MRHRVALDASRAAPLTFRRPAIPLVVGSSLGGSVMRGLLAVVML
                     AGAALNCGSWKRVGTQDAPAPADQLTKLVNVSAFYQRLGRLAATEPLPFVGTVAFVAG
                     PADSVITILGLSLENRALAFQREGNLFVARYRVSISFQREGTRPVELTRDEIVRVPTF
                     QETLRADESILFQQVLRLTPGPYDVSVTVRDAGSTAESRAQGRYTAPSFQAGTTSAPV
                     LAYQATGRGSLTDPLSVVLNPRGAVGYGADTLLAYIEGYGFPGATTVPFEVLDEQQNV
                     IYNDSLRFRGGRPVESQVIRLAPDSISLGELKLVVGTGPAQRSVSALVSFSQAWVITN
                     FDEMLDILRYFGQDAKVNAMRKAPASERSRLWREFYAETDPNKITPENEALNQYFGRI
                     SAANARFTDEGVPGWRTDRGEVFITLGSPDESIETTPGAAGRVVRWTYLTYRLSLFFQ
                     DETGFGRLRLTPGSRAEFERTLNRVRRQS"
     gene            2120..3019
                     /locus_tag="VGQ24_02120"
     CDS             2120..3019
                     /locus_tag="VGQ24_02120"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEV8453656.1"
                     /translation="MDANTLVGRTVAGYQLTKYVGEGGTATVYRAEHPERGIAAVKIL
                     RSRLAQDPVAVKRFLREAEYGARVSHPNIVRTYDYGQSDGLHYLALEWAEGEPLAEFV
                     TRSGRLAPPLVAKIVEQIGEGLAAAHRAGIIHRDLKPANIMYNPVEQTAKLLDFGIAR
                     DAELNPEERLTRAGFFVGTIQYVAPETLSGELVKEQADVYSLATITYYLLTGSLPFTG
                     KSPRELFQQLLTQPPIPLNDAQKGLRFSPAVEATVMRGLERDLSKRCKTVDEFARAFC
                     TAVREQAPKRTGFLTGLFRKGGE"
     gene            3016..3573
                     /gene="pyrE"
                     /locus_tag="VGQ24_02125"
     CDS             3016..3573
                     /gene="pyrE"
                     /locus_tag="VGQ24_02125"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR00336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEV8453657.1"
                     /translation="MTDDESLRQLLLERSVQRGSFVLASGRRSAFYIDCRPATMSAEG
                     MVLIGRMGWDAIRRAGWKPAAVGGLTMGADPVSYAIAAASFGSDAAVDAFSVRKEVKD
                     HGTSRVIEGNFKPGDRVVIVEDVITSGESARRAAEAVEGAGGTVLGIVALVDREEGGK
                     EALQAGGRAVLALTTITALGLRDRG"
     gene            3570..3959
                     /locus_tag="VGQ24_02130"
     CDS             3570..3959
                     /locus_tag="VGQ24_02130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453658.1"
                     /translation="MNRRRVGRAVAATAAIAAFAWAGWAAHDNAMPEFRIYDGYRMML
                     GATLAVIAVAPFIWRWRRDRSLVVIALAAAVGSAIPLVISAYRLHVPIVARLRGSWIL
                     AGADLVGPAVVIGFVCLWLAVRTWNPR"
     gene            3956..4438
                     /locus_tag="VGQ24_02135"
     CDS             3956..4438
                     /locus_tag="VGQ24_02135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453659.1"
                     /translation="MSRESLITYLNDHLAGSVAAMELLDHLIRLQRGTAGEHALAAVR
                     VLVEEDQQTLQSLLREVGGKESRVRQVAAWLTEKLGQAKLRLDDPGSGELQVLEALET
                     LALGIQGKAALWRALAAASAQLPQARHLDLAALEERAQNQFQRVDRLRLQAAPAALSL
                     "
     gene            4848..5063
                     /locus_tag="VGQ24_02140"
     CDS             4848..5063
                     /locus_tag="VGQ24_02140"
                     /inference="COORDINATES: protein motif:HMM:NF039472.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6494 family protein"
                     /protein_id="HEV8453660.1"
                     /translation="MDEEVFNLEVRKFLKRFGVTAQREIEKAVDAALQSRSLIGNEVL
                     KVEATLTIPGVLPQLHIDGEIALSSRP"
     gene            5130..5690
                     /locus_tag="VGQ24_02145"
     CDS             5130..5690
                     /locus_tag="VGQ24_02145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453661.1"
                     /translation="MAPRRRYRLDRVAVEPGERRASTWTFGGKPVSGTEQAYSVLDGN
                     FRSRNEWAFVVRLPKERDGRIEVRPRVTPNVKVWAELPDRSITFSRATKGDARGKWYC
                     QVALADPTGARSRDIVRGDERGALPAWFDALRSRMRVKQNVKNTKGTDGEALVVLVSA
                     GDHAAMIRLFFATKVWVLKERITLTS"
     gene            5687..6187
                     /locus_tag="VGQ24_02150"
     CDS             5687..6187
                     /locus_tag="VGQ24_02150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453662.1"
                     /translation="MNGAAGQAAARGGAEYACSACAEIAGDTTAPGGIIFDDGVWFVS
                     HHTGPFTDPGELIVKTRRHCESLGELSGSEASALGPILKAAVGALERVIVAERIYAVS
                     FNERVRHVHFLLLPRTAAMPRGHVISDLYRRARNLLRRVGLVRNPSPAARADASERIR
                     RQWGQP"
     gene            6208..6726
                     /locus_tag="VGQ24_02155"
     CDS             6208..6726
                     /locus_tag="VGQ24_02155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEV8453663.1"
                     /translation="MTRDSRLGISRLEAKSDAESCAQLMATSEPWLTLGRTYEASLRI
                     VQDPTREVYVARDNEGLAGLLILCMTGAFVGYIQTILVHPDRRGQGIGSRLLEFAEQR
                     ILQESPNVFMCVSSFNEGARRLYQRQGYTVVGELTDYIVEGHSEILLRKTRGPLTGFT
                     RSAEAPDPGKAS"
     gene            6796..7041
                     /locus_tag="VGQ24_02160"
     CDS             6796..7041
                     /locus_tag="VGQ24_02160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453664.1"
                     /translation="MREARLRPEFADLYPALNPGQWEPAARVAEAVLARLLLLEISEA
                     PLQDRILNEEHFEFRGETPDGAPRGSGVSRAADLAEE"
     gene            7043..7585
                     /locus_tag="VGQ24_02165"
     CDS             7043..7585
                     /locus_tag="VGQ24_02165"
                     /inference="COORDINATES: protein motif:HMM:NF009807.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative metal-dependent hydrolase"
                     /protein_id="HEV8453665.1"
                     /translation="MEAVTEDLRYPIGHFRYEGEPDQRRREQWIEEIAATPANLRAVV
                     AGLSPHQLDTPYRDKGWTVRQVVHHLPDSHLNAYTRIKLALTEDVPVIKPYEEALWAE
                     LPDGRAAPIELSLNLLESLHHRWVLLLRQLTPADFRRRFVHPQHGRPIELQETLALYA
                     WHGRHHVAHIASLRRRMAWV"
     gene            7649..8131
                     /gene="msrA"
                     /locus_tag="VGQ24_02170"
     CDS             7649..8131
                     /gene="msrA"
                     /locus_tag="VGQ24_02170"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEV8453666.1"
                     /translation="MAELAKATFGAGCFWGVEVAFRQVPGVVSTAVGYLGGTLPNPTY
                     EDVCSGRTGHAEVVEVTYEPGRVSYDDLLNVFWTNHDPTTLNRQGPDRGTQYRSAIFY
                     HDEGQKAAAEASKERLGASGRFPRPIVTEITPASAFYRAEEYHQRYLEKHGLASCHIP
                     "
     gene            8185..8523
                     /locus_tag="VGQ24_02175"
     CDS             8185..8523
                     /locus_tag="VGQ24_02175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family protein"
                     /protein_id="HEV8453667.1"
                     /translation="MRTAGLLILSNIFMTFAWYAHLGSLDRPWYLAAIASWGIALFEY
                     LLQVPANRIGYTVLSLSQLKILQEVITLAVFAPFAVLYMRQPLKWDYLWAALCLMGAV
                     YFIFRSPAGP"
     gene            8520..>9691
                     /locus_tag="VGQ24_02180"
     CDS             8520..>9691
                     /locus_tag="VGQ24_02180"
                     /inference="COORDINATES: protein motif:HMM:NF015535.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P1 family peptidase"
                     /protein_id="HEV8453668.1"
                     /translation="MTRLQAAGAAMAAALVVSTSSAQAPPERARDLGIPLEGVPGPLN
                     AITDVPGVAVGHTTLIHGAGRLRVGAGPVRTGVTTVFPRGTGDLSPVFAGWFSLNGNG
                     EMTGTAWIDDYGLLLYPVTITNTNSVGVVRDAVIEWGRTRVPGVFNCCLPTVAETWDG
                     DLNDIYGFHVRKEHVFSALAAAKPGPVAEGNVGGGTGMQCLGFKGGIGTASRVLPARA
                     GGFTVGVLVQCNFGLRRQLRIAGVPVGQEIKEPEQCYETDAPLGPDAARKRCPWGQAR
                     DEEHGSIIVVIGTSAPLLPHQLRRVAKRAALGIGRMGGIAGAGSGDLFLAFSAAKPGT
                     ADNLGVTSVPMLNDERIDPLYEATVQATEEAIVNALLAAKTMTGADHLRVPALPHDR"
BASE COUNT         1741 a         3006 c         3250 g         1694 t
ORIGIN      
        1 tcgcccacga gcgccagaaa gtctgccacc tgcctcggtg ggacgccgag gcgctcgccg
       61 gcgttcgatt cgtccaccca agtctcatcg acggccgccg gcccacctcg gccggggttc
      121 aatagcgaga cccgcgggcc caccagctga tagaaatcct tgtctccgga gacaatcacc
      181 gactgaaggc cttgctcggc gccggcggtg gccagcgtgc cgatcacgtc atcagcctcg
      241 taaccgcgaa tggcgatgat cggaatcccg aacgcttcca gcaactgaca gatgcgctcg
      301 accgagcgat cgaagtccgc ttgcagctcc tggtcgagct tttcacgggt cgacttatag
      361 tcggcgtagc gctcttctct gaacgaggtg ccggcatcgt tgatccaggc gacataatcg
      421 ggccggtact tttccctgag ccgaagcagg aaattcacca ccccccaggc cgccgaggta
      481 ttctcccctt tggccgtccg gagcggccgg gaaatcatgg cgtagaaggc gcgatagatc
      541 agcgcatagc cgtcgatcag gaagagctgg ggcgggttgt gattgggcat ttgcctgaaa
      601 aataaggcgg cgaaggcgga aacggcggag aggctctacg actggcgtct aacccgattg
      661 agggtccgct cgaattcggc ccgcgagccc ggggtcagac ggagccggcc gaagccggtc
      721 tcatcctgga agaagaggga caagcggtag gtgagatagg tccagcggac cacccggccg
      781 gccgcgcccg gcgtggtctc gatgctctcg tcgggggaac cgagcgtgat gaacacttcg
      841 ccacgatcgg tgcgccaacc aggcacgccc tcgtcggtga agcgtgcatt agcagcggaa
      901 atccgcccga agtactggtt gagcgcctcg ttctcgggcg tgatcttatt cgggtcagtc
      961 tcggcataga actcccgcca tagccgcgac cgctcggatg ccggcgcctt ccgcatggcg
     1021 ttgacctttg catcctggcc gaaatagcgg aggatatcca gcatctcatc gaagttggtg
     1081 atcacccagg cctgggagaa cgagaccagg gccgagacgc ttcgctgggc cggtccggta
     1141 ccgacgacga gcttgagctc tccgagagaa atgctgtcgg gggccaggcg tattacctgg
     1201 ctttcgaccg ggcgcccgcc ccggaaccgt agcgagtcgt tgtagatgac gttctgctgt
     1261 tcgtccagca cttcgaaggg gactgtcgtg gcgccgggaa agccgtaacc ctcgatatac
     1321 gcgagcagcg tgtccgcacc gtagcccacc gcgccacgcg ggttcagcac gaccgagagc
     1381 ggatcggtca gacttccccg ccccgtggcc tgataggcga ggaccggcgc cgacgtggtg
     1441 ccggcctgga acgatggagc cgtgtagcgc ccctgagccc ggctctcggc ggtggagccg
     1501 gcatcccgca ccgtgacact gacatcgtac gggccgggcg tcagacggag cacctgctgg
     1561 aagagaatgc tttcgtcggc tcggagggtc tcctgaaacg tcggcactcg cacgatctcg
     1621 tcccgggtga gctcgacggg gcgggtgccc tcacgctgga atgagatgct cacccggtag
     1681 cgggcgacga agagattgcc ctcgcgttga aacgcgaggg cccggttctc cagcgagagc
     1741 cccaggatag tgatcaccga gtccgccgga cctgccacga acgcgaccgt ccccacgaac
     1801 gggagtggct ccgtggcggc caaccgaccg agtctctggt agaacgcgga gacgttgacc
     1861 agcttggtca gctggtcggc gggagccggc gcgtcctggg tgccgacgcg tttccagctg
     1921 ccgcaattga gggcggcccc ggccagcatt accacagcga gcagcccacg catgacgcta
     1981 cccccgagtg aactgcccac gaccagcggg attgcgggtc ggcggaacgt tagtggcgcc
     2041 gcacgagagg cgtcaagcgc gactcggtgg cgcattccaa cttgctgcct catgcgagat
     2101 taactagctt ggccactcca tggacgcaaa caccctagta ggacgcacag tcgccggtta
     2161 ccagctcacc aagtatgtcg gcgagggtgg aaccgcgact gtataccgcg cggagcaccc
     2221 ggaacgcggc atcgcagcgg taaagattct ccgctcgcgc ttggcccagg atccggtggc
     2281 cgtcaagcga tttcttcgcg aggccgagta cggtgcccgg gtcagtcatc ccaatatcgt
     2341 ccgcacctac gattacggtc agtccgatgg actgcattac ctggcgctcg aatgggccga
     2401 gggggagcct ctcgcggagt ttgtcacccg ctccggccgg ctggccccgc ctctcgtcgc
     2461 caagatcgta gagcagatcg gagaggggct cgcggcggct caccgcgcgg ggatcattca
     2521 tcgagacctc aagccggcca acatcatgta caatcccgtc gagcagaccg cgaagctgct
     2581 cgacttcggc attgcccggg atgccgagct gaacccggaa gagcggctca cccgtgccgg
     2641 gttcttcgtc gggaccattc agtacgtggc gccggaaaca ctgagcgggg aactggtgaa
     2701 ggagcaggca gatgtctaca gcctggctac gatcacctat tatctgctca cggggagcct
     2761 cccgttcacc gggaagagcc cgagagagtt gtttcagcaa ctactaacgc aaccgccgat
     2821 cccgctgaat gatgcgcaga aggggcttcg cttctcacct gccgtcgaag ccaccgtcat
     2881 gcgcggtctc gaacgcgatc tgtcgaagcg ctgtaagacg gtggacgaat tcgctcgcgc
     2941 cttctgcacg gcggtgcgcg agcaggctcc caagcgcacg ggcttcctga cgggactgtt
     3001 ccgtaagggc ggagagtgac ggacgacgag tcgctccggc aactactgct ggagcgctca
     3061 gttcagcggg ggagctttgt gctcgcgtcc ggacggcggt ctgctttcta tatcgactgc
     3121 aggcctgcca ccatgtctgc ggaagggatg gtcttgatcg gccgcatggg gtgggacgcc
     3181 attcgccggg cgggctggaa accggcggcg gttgggggcc tcaccatggg ggcggaccca
     3241 gtgtcctacg cgatcgcggc cgcgagcttt ggaagcgatg cggcggtcga cgcattcagt
     3301 gtacgaaagg aagtaaagga tcatggcacc agccgagtaa tcgaaggcaa cttcaaaccg
     3361 ggtgaccgcg tggtgattgt cgaagacgtg atcacctcgg gcgagtcggc tcgccgggcg
     3421 gcagaggcgg tggagggagc aggcggcacg gtgctcggca ttgtcgccct ggtcgatcga
     3481 gaagagggcg gcaaagaggc gctccaggcg ggtgggcggg cggtgctcgc gctcaccacc
     3541 attaccgcgc ttggactgag ggaccgcgga tgaatcgccg gcgggtcgga agagcggttg
     3601 ctgcgaccgc ggcgattgct gcgttcgcct gggccggctg ggctgcgcac gacaacgcca
     3661 tgcccgagtt caggatctac gatggctacc ggatgatgct cggggccacg ttagcggtga
     3721 tcgccgtggc ccccttcatc tggcggtggc gccgggaccg ctctctggtg gtgatagcac
     3781 tcgccgcggc agtgggcagt gctattcccc tcgtcatttc cgcctaccgt cttcatgtgc
     3841 cgatcgttgc ccgcttgcgt ggctcctgga tcctcgccgg cgccgacctc gtcggcccag
     3901 cggttgtgat cgggtttgtt tgcctctggc tcgccgttcg aacgtggaac ccaagatgag
     3961 ccgcgaaagc ctgatcacct acctcaatga ccacctcgcc gggtcggtgg cggccatgga
     4021 gctgttggat cacctgatcc ggctgcagcg gggcacggcg ggcgagcacg cgctcgctgc
     4081 agtgcgcgtc ctggtggagg aagaccagca gactcttcag agcctgctgc gtgaggttgg
     4141 cgggaaggag agccgggtac gccaggtggc ggcatggctt accgagaagc tggggcaagc
     4201 caagctccgc ctcgatgacc ccggcagcgg ggagctccag gtgctggagg cgctcgagac
     4261 actggcgctg ggtatccagg ggaaggccgc cctgtggcgc gcgcttgcgg ctgcgtcggc
     4321 tcagctgccc caggcccggc acttggattt ggccgccctc gaggagcggg cccagaatca
     4381 gttccagcgg gtcgacaggc tgcgtctcca agcggcaccg gcggctctat ctttatagga
     4441 tgtcaacgga actgggccga ggtcagcccg caaacgggtg gatcctgtac gacggagcct
     4501 gcggggtctg cagtcactgg gttcccaagt ggcgaggcat cctggcgcgc ctcggtttgg
     4561 cggtcgcccc cctccagagc tcctgggtgg aggatcggac cggcctttcg cgggacgtgc
     4621 tcctgacgga tctccgtcta ctccacagcg acggaagcat cacctcgggg gccgacgtct
     4681 atcggtacgt tctgcgtaga atctggtggg ggtatcccct gtacctcctc tcggtaatac
     4741 cgggtcccag gagcatcttc gattgggcct atcggacatt cgcccaacac cggatgggga
     4801 tcgctgctag ctgcggtgta ccgcaataga ccaaggctgg aggtagcatg gacgaggaag
     4861 tcttcaacct cgaggttcgg aagttcctga agcgtttcgg tgtcacggca cagcgcgaga
     4921 tcgagaaggc ggtggatgcc gcattgcaaa gccgctcgct catcggcaac gaggtcctga
     4981 aagtcgaggc aacgctgacc attcccgggg tgctgccgca gctccacatc gacggggaga
     5041 tcgcactctc gtcccgaccg taggaaccgc gctgacgccg gaagccagac cgcccctgaa
     5101 gtgcagaaga cgaccagcaa ggaggccgca tggcaccacg aaggcgttac cggctggacc
     5161 gggtggcggt ggagccgggc gagcggcgcg cgtccacctg gaccttcggc gggaagcccg
     5221 tgtccggcac agagcaggcg tacagcgtgc tcgacggcaa tttccgctcg cgcaatgagt
     5281 gggcctttgt ggtccgtctt cccaaggagc gggatgggag gatcgaggtc aggccacgag
     5341 tgacgcccaa cgtcaaagtc tgggcggagc ttcccgaccg atccatcacc ttctcgcggg
     5401 ccaccaaggg tgatgcgcgg gggaagtggt actgccaggt ggcactcgcc gacccgacgg
     5461 gggcccggag cagggatatc gtgcgggggg atgagcgcgg cgctctgccg gcctggtttg
     5521 acgccctcag gagccgcatg cgagtaaagc agaacgtgaa aaacaccaag ggcaccgacg
     5581 gcgaggcgct ggtagtactg gtttccgccg gcgaccatgc cgccatgatc cggctcttct
     5641 ttgccaccaa ggtctgggtg ctgaaggagc ggatcaccct gacatcatga atggcgcggc
     5701 gggacaagca gctgcgaggg gaggggcaga atatgcttgc agcgcctgcg ccgagattgc
     5761 cggcgatacg accgcgccgg gcggcatcat cttcgacgac ggcgtctggt tcgtcagcca
     5821 ccacaccggt cccttcaccg accccggaga gctgatcgta aagacccgcc ggcattgcga
     5881 gtcactcgga gagctgagtg gatccgaggc cagtgcactt ggcccaatcc tgaaggccgc
     5941 tgtgggagcg ctcgagcggg tgatcgttgc agagcggatc tacgccgtat cgttcaacga
     6001 acgcgtgcgt cacgtccatt ttctgctgct gccgcgcacc gctgcaatgc cccgcgggca
     6061 cgtgatctcg gacctgtacc gacgagctcg gaatctgttg cggagagtcg ggctagtgcg
     6121 gaatccgagt ccggccgctc gggccgacgc gtcggagcgg atccgccggc aatgggggca
     6181 accctgaacg gatcgatgac gtctgctatg acccgggact cacggctcgg catatcccgc
     6241 ctcgaggcca agtcggatgc cgagtcgtgc gcgcagctca tggccacctc ggagccatgg
     6301 ctgacgctgg gacgcaccta cgaggcgtcg ctccggatcg tgcaggatcc cacgcgagag
     6361 gtctacgtgg cccgcgacaa cgaaggcctg gcgggtctcc tgatcctgtg catgactggt
     6421 gcgttcgtgg gctacatcca gactatcctg gtccatcccg accggcgggg ccaggggatt
     6481 ggctccagat tgctcgagtt cgccgagcag cggatcctcc aggagtcgcc gaacgtcttc
     6541 atgtgtgtct cttcgttcaa tgagggtgcc cggcgactct atcaacggca gggctacacg
     6601 gtggtcgggg agctgaccga ttatatcgtc gaggggcact cggagattct gctccgtaag
     6661 acccgcgggc cactgaccgg atttactcgc tcagcggagg cacccgatcc tggcaaggcc
     6721 tcgtgatgat tggctgaggt atagcgccca atccgaagcg aagctaggat cgatatatgc
     6781 caggggctcg accgaatgcg tgaggcgcgc ctgcgtcccg agtttgccga cctgtatccc
     6841 gcgctgaacc caggacagtg ggagccagcg gcacgggtgg ccgaggcggt actggcccgg
     6901 ctgctcctgc tcgagatctc ggaggctccg ctccaggatc gtatcctgaa cgaggaacac
     6961 ttcgaattca ggggtgagac gcctgacgga gcacccaggg gatcgggagt ttctcgcgcc
     7021 gccgacctcg cggaggaata gtttggaagc ggtaacggaa gacctgcgct acccgattgg
     7081 gcacttccgg tacgaaggcg agcccgacca acgccggcgg gaacaatgga tcgaagagat
     7141 tgccgcgacg ccggccaatc tccgagcggt cgtggcggga ctctctcccc atcaactcga
     7201 cactccctac cgggataaag ggtggacggt tcgccaggta gtacaccacc tgccggatag
     7261 ccatctcaac gcctataccc gcatcaagct cgcacttacc gaagacgtgc cggtcatcaa
     7321 gccgtacgag gaggcactct gggccgaatt gccggacggc cgtgcggctc ccatcgaact
     7381 atcgctgaat ctgctcgaga gcctgcacca tcgctgggtc ctgttgctcc gccagctcac
     7441 cccagccgac tttcgcaggc ggttcgtgca tccgcagcat ggccggccaa tcgagttaca
     7501 ggagacactg gccctctacg cctggcatgg gcggcatcac gtggcgcaca ttgcttcgct
     7561 ccgccgtcga atggcttggg tttgaccggg tgggaacgat ccagaagcca cactcgtttc
     7621 agcggtggga cttaacagga gtggatcgat ggctgaactg gcaaaagcga catttggcgc
     7681 aggctgcttc tggggcgtcg aagtggcctt ccggcaggtg ccgggcgtgg tttcgaccgc
     7741 ggtgggatat ctcggcggaa ccctgccgaa cccgacgtat gaggacgtgt gcagcgggcg
     7801 tacgggacac gccgaggtag tcgaggtcac ctacgagccc ggcagggtgt cttatgacga
     7861 tctgctgaat gtgttctgga ccaatcacga tccgacgacc ctcaaccggc agggtccgga
     7921 tcgggggacc cagtaccgtt cggccatctt ttaccacgac gagggccaga aggcggcggc
     7981 ggaggcgtcc aaggagcggc taggggccag cgggcggttc ccgcgaccga tcgtcacaga
     8041 gatcaccccg gcgtctgcct tctatcgggc ggaggagtat caccagcgat acctcgagaa
     8101 acacggactc gcgagctgtc acatcccgta gccgcaggct cccagacgac caaccaggag
     8161 gggcgtatca gcggttcgat cttcttgcgc acggccggcc tgttgatcct ctcgaacatt
     8221 ttcatgacgt tcgcgtggta cgcccacctg gggagcctag atcgcccctg gtacctggcg
     8281 gccatcgcga gctggggcat agcgttgttc gagtatctcc tccaagttcc ggccaaccgc
     8341 atcggctaca cagtgctctc gctttcccag ctgaagatcc ttcaggaagt gatcacgctt
     8401 gccgtgttcg ctccattcgc cgtgctgtat atgcgccagc ctttgaagtg ggattatctc
     8461 tgggctgcgc tgtgcctgat gggcgcagtg tacttcatat tccgttcacc ggcgggtcca
     8521 tgacccggct ccaggccgcc ggagccgcga tggccgccgc actcgtggtc tcgacgagct
     8581 cggcccaggc accgccagag cgagcccgag acctagggat accgctggag ggcgtcccgg
     8641 gtccactgaa cgcgatcacc gatgttcctg gtgtggccgt cggtcacacc actctgattc
     8701 acggtgccgg ccgcttgcgt gtcggggccg gaccggtgcg cacgggtgtg accacggtgt
     8761 tcccccgcgg aaccggcgat ctctcgccgg tctttgccgg ctggttcagc ctcaatggca
     8821 atggtgagat gacgggcacc gcgtggatcg acgattatgg cctcttgctg tatcccgtca
     8881 ccatcacgaa caccaatagc gtaggagtgg tgcgggatgc ggtgatcgaa tgggggagga
     8941 cccgagttcc cggcgtgttc aactgctgtc tcccgacagt ggccgagacc tgggacggag
     9001 acctcaacga catctacggc tttcatgttc gtaaggagca cgtcttctcg gcccttgcag
     9061 ccgccaagcc aggaccggta gcggagggga atgtcggagg cggtaccggc atgcagtgcc
     9121 tgggcttcaa gggcgggatc ggcactgcca gccgggttct gcctgctcga gccggcggct
     9181 ttacggttgg cgtactggtt cagtgcaact tcggtctcag gcggcagctc agaatagcag
     9241 gcgtgcccgt tggccaggag atcaaggagc cggagcagtg ctatgagacc gatgcgccac
     9301 tcgggccgga cgccgcccgc aagcgctgcc cctgggggca ggcgcgcgac gaggaacacg
     9361 ggtcgatcat cgtggtaatc ggaaccagcg caccactgtt gccgcaccag cttcgccggg
     9421 tggccaagcg cgcagcgttg gggatcggac gcatgggtgg cattgccggc gcagggtccg
     9481 gagatctgtt cctggccttt tcggccgcga agccgggaac ggccgacaac ctgggggtga
     9541 cgtccgtccc catgctcaat gacgaacgga tcgatcctct ctacgaggcc acggtgcagg
     9601 cgaccgagga ggccatcgtc aacgcccttc ttgccgccaa gaccatgacg ggcgccgatc
     9661 acttgcgggt gccggcgctg ccccacgatc g
//
LOCUS       DASYRV010000092        11623 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_451672, whole genome shotgun sequence.
ACCESSION   DASYRV010000092 DASYRV010000000
VERSION     DASYRV010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11623
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_451672"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..721
                     /locus_tag="VGQ24_02185"
     CDS             <1..721
                     /locus_tag="VGQ24_02185"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEV8453669.1"
                     /translation="FRGLKDPLAAEPAAILAGLGADTAGLDARWEPYLSLEPSLVIAR
                     ARQALSTPATVTLRLSRDSLYAEGEASLLWVSRAAGLGMLPPGVSHLNLTGIAPRLPP
                     ELETLKAQIENRMVLFEIGSATLDPTERTALDSVAASLLRLRAATSRLGYRADLELQG
                     RTDPTGTDAINQSLSRSRVDAVIPVLIRLGVPSEGLRGVPLGTGNPLPGRAGQDQAQV
                     NRSVAFVVRVTPEPVAPEGSR"
     gene            718..1230
                     /locus_tag="VGQ24_02190"
     CDS             718..1230
                     /locus_tag="VGQ24_02190"
                     /inference="COORDINATES: protein motif:HMM:NF012255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rab family GTPase"
                     /protein_id="HEV8453670.1"
                     /translation="MNQKKVCMVGLFGTGKTSLVQQFVHSIFSVKYHSTVGVKIDRKA
                     VDVDSTPVTLVLWDLAGRDASQDIPASYLRGSHAIFFVVDGTRRETFDQLAELRELAR
                     AAAGEVPSLVALNKADLADQWVLGQAEEAALAAQGLQLLKTSAKTGAGVEEAFRWLAR
                     ETVREGGKRA"
     gene            1227..2060
                     /locus_tag="VGQ24_02195"
     CDS             1227..2060
                     /locus_tag="VGQ24_02195"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HEV8453671.1"
                     /translation="MTNGEKPVQIDSFGLTDIGKVRRVNEDQFVIASLRKSVRLRHTS
                     LTDAELVARLAGVESYLFVVADGVGGRPGGELASTSAVSSLLEYVDQAVVAYHSLDID
                     QEHDFLANLERSVQRAHERILEEHGAPGKGPATTLTMVTLTWPRAYLVHVGDSRAYYL
                     RGGRLRQLTRDQTTGEYMVDVGAWTEDQAARAHVGGNLTSALGGQEMTPAVGLIDLEP
                     GDVLLLCTDGLTKHVADPQIANVLGGTGSAEAMCRELVQKSLDTGGSDNVTVIVAKLG
                     G"
     gene            complement(2029..2511)
                     /locus_tag="VGQ24_02200"
     CDS             complement(2029..2511)
                     /locus_tag="VGQ24_02200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453672.1"
                     /translation="MSSHPSKPTAPVADSTDSLPLPRARELFARAFRLRCPVCGGRPI
                     LLSWFTVAPSCPVCGLHLDRDEPGYWIGSYTINLFLTEGMFAVVFGAGLLLTWPTVPW
                     TGLAILCGALAVLVPILVFPHTKLLYLAIDLAFRPLEPNDLESPHERPFTRPASPRSR
                     "
     gene            complement(2471..3466)
                     /locus_tag="VGQ24_02205"
     CDS             complement(2471..3466)
                     /locus_tag="VGQ24_02205"
                     /inference="COORDINATES: protein motif:HMM:NF016103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HEV8453673.1"
                     /translation="MSCRSEQAVAGGWQVAGSLTIAVLLAFRSVSPAVGQSPVTSGPS
                     PATSYTPHRVYDTRGKQFLDFETLVGRLAAAELVFVGEQHDDPATHRMELAILEGIAR
                     RRDSVVLALEMFERDVQPLLDGYLADSTSEEEFLKGSRPWKNYAGDYRPLVELARARN
                     WPVVASNVPRSLASSVGRAGLAALDTLSSPARSQLAEALACPEDVYYEKFVKVMGDLA
                     SHGPSPTNGEAPKARLLRLYQAQCVKDETMGESVARVWRPGRLVVHYNGAFHSDFRLG
                     TAARAKRRASNARLLVVTALPVKDLDRLKPSKEDRKRADYLLYVLAPVQADSASR"
     gene            complement(3450..3818)
                     /locus_tag="VGQ24_02210"
     CDS             complement(3450..3818)
                     /locus_tag="VGQ24_02210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES family protein"
                     /protein_id="HEV8453674.1"
                     /translation="MDVPPKKLLVAGDRVLIAPAEGEERTKVGLYLPATAIETQQVQE
                     GLIVATGPGDPLPDPAVFEDEPWRAEEKTPRFKPMQARVGDHAIFFRKAAVEIRFEDK
                     RYLVVPQAAILVLVRDELPI"
     gene            complement(3824..4342)
                     /locus_tag="VGQ24_02215"
     CDS             complement(3824..4342)
                     /locus_tag="VGQ24_02215"
                     /inference="COORDINATES: protein motif:HMM:NF013440.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GreA/GreB family elongation factor"
                     /protein_id="HEV8453675.1"
                     /translation="MPGDPSPGRLFFRLRQMIEQMRDKLSKEIEELSRELTVTLPQAI
                     ALAVAMGDLRENSEYKAALERQQLVQARLGQLHHRLAQLAQLANTEAPRDRVGLGSKV
                     MVEDVGSGDRETYTLVLAEMMDIDAGHISLASPLGRALKDRKPGEEVSLRLPTATRKL
                     RVLEVVTIHEQG"
     gene            4544..5611
                     /gene="coxB"
                     /locus_tag="VGQ24_02220"
     CDS             4544..5611
                     /gene="coxB"
                     /locus_tag="VGQ24_02220"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR02866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HEV8453676.1"
                     /translation="METRTGPFRRLARFTPALGLLLFLAACAHNYPQTTLKPRGDFAR
                     LVDGLFRTTVWWAIVVFVLVEGALLIAIFKFRGRPDDPEPKQVHGNTVLEVVWTIIPA
                     FILVMIAVPTIKTIFRTSDYAAGDVVQIEVIGHQWWWEFRYTGLGVVTANELHVPVGK
                     TVNLRMTTVDVLHSFWVPQFAAKRDVFPRRHNPLWFKAEVTGSFSGQCAEFCGAQHGR
                     MGFRVISESPEEFAVWVERQRVGSPLVNQGKVAADSVPPIDSIEVAGRALFSGGGCIG
                     CHALVGTPLAGQTSLKGPNLSHVGSRTTIVAGMLQNTPENLRKWLSNPDSVKKGTLMV
                     LPRKLTDAELTLLVAYLRSHQ"
     gene            5622..7466
                     /gene="ctaD"
                     /locus_tag="VGQ24_02225"
     CDS             5622..7466
                     /gene="ctaD"
                     /locus_tag="VGQ24_02225"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HEV8453677.1"
                     /translation="MATSVLDHAPAVHAEKTGIWSWITTVDHKRIGILYGTTAFIFFL
                     MGGIEALIMRIQLMKPDNTLVSAELFNSLFTMHGTTMIFLGVMPLSAMFFNYFIPLHI
                     GARDVAFPRLNAFSYWVFLLGGLFINFSFLLNAAPNAGWFGYANLTENTYSPGLNTDF
                     WVLGLQILGIASMAAAINFFVTIVNLRAPGMKMLRMPMFVWMSFITQILLLLAFPVIT
                     VALVFLMMDRHFGSHFFLPEGGGDPVLWQHLFWIFGHPEVYILILPAFGIVSEVLPVF
                     SRKPLFGYTAMVFSGAFIAFLGFGVWSHHMFATGMGPFADSFFAISTMLIAVPTGVKI
                     FNWLGTLWGGSLQFKTPLYFAIGMVAMFIIGGLSGVMHASPPADLQQTDTYFVVAHFH
                     YVLFGGSIFGLTAGAYYWFPKMFGRMLHEGLGKLHFWLMLIGFNLTFFPMHFLGLNGM
                     PRRVYTYPAELNLEFWNRIQTWGSLLLGLSFLIFIYNILKTMRRPADAPADPWRGATL
                     EWAIPSPPQEFNFGEVPPVHSSTPVWDLRRASGGQLPEPRRVSGAGIHLPRPSIWPAV
                     TAVGVLGVIGSILFTHAFSHWYFITLSGAAILFYGVYRWAFEPPFPEH"
     gene            7470..8135
                     /locus_tag="VGQ24_02230"
     CDS             7470..8135
                     /locus_tag="VGQ24_02230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HEV8453678.1"
                     /translation="MSHAIPAPHALSEGSQHDSHPTTTGIPSRKVALWTLIGSECLFF
                     ASLISTYLVYKGKSLVGPLPHTESQCVLHGKMQTCEHIFEIPLVTTGTAVLLFSSFFI
                     VLALYGAQRGKRKMLVGWLAATVLAGMFFVGMQVYEFQHFYHKGMGYGTNLFSSTFFT
                     LTGFHGSHVTVGVIWLATLLVLAIKGKIPPQKALNLESAALYWHFVDVVWIVIFPTVY
                     LMR"
     gene            8143..8496
                     /locus_tag="VGQ24_02235"
     CDS             8143..8496
                     /locus_tag="VGQ24_02235"
                     /inference="COORDINATES: protein motif:HMM:NF015582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase subunit IV family protein"
                     /protein_id="HEV8453679.1"
                     /translation="MEAQDAHAHDQHAHPTPALYLKVALVLFVLTAMEVLAFEAGRGG
                     LGASLRPVFEPIVVLLLVVLSAAKFALVAMFYMHLKQDPRLLANLFVFPLLIAAVIIA
                     ALIVLFSYWRAVGAH"
     gene            8565..9293
                     /locus_tag="VGQ24_02240"
     CDS             8565..9293
                     /locus_tag="VGQ24_02240"
                     /inference="COORDINATES: protein motif:HMM:NF021214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HEV8453680.1"
                     /translation="MYLYAIGPFRRRLELGPPVEPWRPLCFFGGLAVILISLNGPIHD
                     LSDRYLFWVHMAQHLLLTLVLPPLLIAGLPGWLVEQAVRRRAGRAVARALTHPVFAGF
                     LFSATLLVWHTAGAYDLMMRNHSVHVVTHLMFMVTAVLLWWPVMSPARSLPRLSPGMG
                     MLYLFVVQLPMQLLGAIITFADRPLYPWYLAAPRTWGLSPLDDQKLGGLLMWIPGNLW
                     IWGAMSVLFFRWASAERNSVNSEP"
     gene            complement(9351..9767)
                     /locus_tag="VGQ24_02245"
     CDS             complement(9351..9767)
                     /locus_tag="VGQ24_02245"
                     /inference="COORDINATES: protein motif:HMM:NF020157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1761 domain-containing protein"
                     /protein_id="HEV8453681.1"
                     /translation="MPPFTVNYLAVVVAGVAAFMLGALWYSPALFARQWVAAQGHTPE
                     KVAAMRQQMTKTYAISFVCFLVTAWVMAVLISRVGVTGALGGVKLGGITWLGFAATIG
                     LTSNLYSGKPLAAFLIDAGYQLVYLIVMAVILAVWR"
     gene            complement(9869..10717)
                     /locus_tag="VGQ24_02250"
     CDS             complement(9869..10717)
                     /locus_tag="VGQ24_02250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HEV8453682.1"
                     /translation="MRWTPGGSSPDIEDLRGRSGGRFRLPGRIGLGGLLLLLVLSVVF
                     KQDFFSLVGMGGGPGQVAAGPVEASPEEEKLKSFIGFVLDDVQATWDQTLPEQAGTRY
                     EHARLVLFRDAIESACGFAEAATGPFYCPGDHRVYIDLGFYQDLAERFGAPGDFAQAY
                     VLAHEIGHHVQTLLGTEAQLRQLQGSRPAQANELSVRFELQADCYAGVWGSSAARRGK
                     LETGDVEEGLNAAAAVGDDRVQRMSSGRISPEGFTHGSSEQRSQWFRQGLNSGRLSAC
                     DTFAAR"
     gene            complement(10734..11129)
                     /locus_tag="VGQ24_02255"
     CDS             complement(10734..11129)
                     /locus_tag="VGQ24_02255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HEV8453683.1"
                     /translation="MSGERWRRGATVAGALLAALAVLAGAFGAHALRDRLNPAALTLF
                     ETAARYQMYHALGLLVASQLLMQRPPLLRATCACFLTGIVLFSGSLYVLALTGRSWLG
                     AITPFGGVAFLAGWAGVALGSIRRPAQTT"
     gene            complement(11119..>11623)
                     /locus_tag="VGQ24_02260"
     CDS             complement(11119..>11623)
                     /locus_tag="VGQ24_02260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEV8453684.1"
                     /translation="KPLLDTSRKGYLEAVSVSAYSNIALVRQLSPLMRAGGSYLSLTY
                     MAGERVIPGYGGGMSSAKAALESDTRTLAFEAGRRFGVRVNTISAGPLASRAASAIGL
                     IQRMIAYTKANAPLTRELEAGDVGHTAAFLASPLAAGITGSVVYVDNGYHAMGMGVEG
                     AGTIGER"
BASE COUNT         1890 a         3860 c         3711 g         2162 t
ORIGIN      
        1 ttttcgcggg ctcaaggatc cccttgccgc cgagccggcg gcaattctcg ccgggctcgg
       61 cgcggacacg gcagggctcg acgctcgctg ggagccgtat ctttcgctgg agccgagcct
      121 ggtcattgcg cgcgcgcggc aggccctctc gactccggcg actgtgacat tgcgtttgag
      181 ccgggattcg ctctacgccg aaggcgaggc atccctcctc tgggtaagtc gggctgccgg
      241 gctcgggatg cttccgcctg gcgtgtctca tctcaatctg accgggatcg cccccagact
      301 tcctcccgag ctcgagacgc tcaaggcgca gatcgaaaac cggatggtgc tctttgagat
      361 cggttccgcg acgctggatc ccaccgagcg gactgcgctc gattcggtgg ccgccagcct
      421 ccttcgcctg cgggccgcca ctagtcgact cggctatcgg gcagacctgg agcttcaggg
      481 ccgcacggat ccgaccggaa ccgatgcgat caatcagagt ctgagccgct cgcgagtcga
      541 cgcagtcatc cccgtcctga tccggctggg tgttccctcc gaggggctgc ggggagttcc
      601 gctgggcacc ggaaaccccc ttccaggccg cgccggccag gatcaggcgc aggtcaatcg
      661 cagcgtagcg tttgtggtgc gagtcactcc tgagcctgtt gccccggaag gaagccgatg
      721 aaccagaaga aggtgtgcat ggtcggcctg ttcgggaccg gcaagaccag cctggtgcag
      781 cagttcgtgc attccatctt ctcggtgaag tatcactcga ccgtgggcgt caagatcgat
      841 cgaaaagcgg tcgacgtgga cagcactccc gtcacgctgg tgctctggga tctggccggc
      901 cgcgatgcct cccaggacat tccggccagc tacctgcgcg gttcccacgc aatttttttc
      961 gtggtcgacg gcactcgacg cgaaactttc gaccagctcg ctgagctccg ggagctcgct
     1021 cgagcggcgg cgggcgaggt gccctccctg gtcgcgctca acaaagccga tctcgcagac
     1081 caatgggtcc tgggtcaggc ggaggaggcc gcgctcgccg cgcagggcct ccagctgctc
     1141 aagaccagtg cgaagacggg agcgggtgtg gaagaggctt ttcgctggct ggctcgggag
     1201 acggtccgcg agggaggaaa gcgggcatga ccaacggcga aaagccggtc cagatcgact
     1261 cgttcgggct gaccgacatc ggcaaagtcc ggagggtcaa cgaggaccag ttcgtcatcg
     1321 cgtcgctgcg gaaatccgtg cggctgcgcc acaccagcct cactgatgca gagctggtgg
     1381 cccgcctggc cggcgttgaa tcgtatctct tcgtcgtcgc cgacggcgta ggcggccggc
     1441 ccgggggcga gttggccagc accagcgccg tctcctcgct gctcgaatac gtcgatcagg
     1501 ccgtggtcgc ctatcactcc ctggacatcg accaggagca cgacttcctc gccaacctgg
     1561 aacgctcggt ccagcgggcg cacgagcgga ttctcgagga gcatggggcg ccgggcaaag
     1621 gaccggcgac cacgcttacc atggtgacgc tcacctggcc gcgcgcctac ctggttcacg
     1681 tgggggacag ccgtgcctac tatctgcggg gtggccgttt gcggcagcta acccgcgatc
     1741 agacgaccgg cgagtacatg gtggacgtgg gagcctggac cgaggaccag gcggcgcgcg
     1801 cccatgtagg cggaaatctc accagcgcgc tgggcggaca ggagatgacc ccggcggtgg
     1861 gcctgatcga cctcgagccc ggcgacgtcc tgttactctg caccgacggg ctcaccaagc
     1921 acgtcgccga cccgcagatc gcgaacgtac ttggcggcac ggggagcgcg gaagctatgt
     1981 gtcgtgagct ggtgcagaaa tcgctggata ccggcggcag cgacaacgtc accgtgatcg
     2041 tggcgaagct gggcgggtaa agggccgctc gtgcggcgat tccaggtcgt tcggctcgag
     2101 cggccggaac gccagatcga tggccagata aagcagctta gtgtgcggaa agaccaggat
     2161 cgggaccagc accgccagcg cgccgcagag aatggcgagg ccggtccacg ggacggtcgg
     2221 ccaggtgagc aacagtcccg ccccgaacac cacggcaaac atgccctcgg tcaggaacag
     2281 attgatcgtg taactgccga tccagtagcc gggttcgtct cgatccaggt gcagtccgca
     2341 gacgggacaa gacggcgcca cggtgaacca gctcagcaga atagggcgtc cgccgcagac
     2401 cgggcagcgc aggcggaatg cccgggcgaa aagctcccgc gcgcgcggga gtggcaggga
     2461 atcggtgctg tcagcgactg gcgctgtcgg cttggacggg tgcgaggaca tagagcaggt
     2521 aatccgctcg cttgcggtcc tccttggaag gcttcagccg gtccagatct ttcaccggaa
     2581 gggccgtcac cacgagcagc ctggcattcg aagcgcggcg ctttgcgcgc gcggcggtgc
     2641 cgagccggaa atcgctgtgg aaagctccgt tgtagtggac gaccaggcgt ccgggccgcc
     2701 acacccgcgc caccgactca cccatcgttt catccttgac gcactgtgcc tggtacagcc
     2761 ggagcagccg cgccttggga gcttcgccgt tcgtgggcga tgggccgtgc gatgccaggt
     2821 cacccatgac cttcacgaac ttctcgtagt agacatcctc ggggcaagcg agcgcctcgg
     2881 ccagctggga gcgagcgggg gagctgagcg tgtcgagcgc cgccaggccc gcccggccca
     2941 cggaggaggc cagggagcga gggacattgc tcgccaccac gggccagttg cgtgcgcgcg
     3001 ccagctcgac cagtgggcgg tagtccccgg cgtaattctt ccaggggcgg ctgcccttga
     3061 ggaactcctc ttcgctcgtg ctgtcggcga ggtacccgtc gagcagcggc tgcacgtcgc
     3121 gctcgaacat ttcgagcgcg aggactacgg aatcgcgccg ccgcgcgatc ccctccagga
     3181 tcgccagctc catccgatgg gtagccggat catcatgctg ctcgccgacg aaaacgagtt
     3241 cggcggcggc gagccggccg accagggtct cgaaatcgag gaactgtttg cctcgggtat
     3301 cgtacacgcg atggggggta tatgaggtgg caggtgacgg gccgctggtg acaggggact
     3361 gcccgacggc tgggctcacg ctgcggaacg cgagcagcac ggcgatggta agacttcctg
     3421 ccacctgcca cccgccagct accgcctgct cagatcggca gctcatcccg caccagcacc
     3481 aggatcgccg cctgcggcac caccagatac cgtttgtcct cgaagcggat ctccaccgcc
     3541 gccttccgga agaaaatggc gtgatctcca acgcgtgcct gcatgggctt gaagcgaggc
     3601 gtcttctcct ctgcgcgcca gggctcgtct tcaaacaccg cgggatctgg gaggggatcc
     3661 cccgggcccg tcgcgacgat cagaccttcc tgcacctgct gggtctcgat cgccgtcgcg
     3721 ggcaggtaga gtcctacctt ggtgcgctcc tcgccttccg ctggtgcgat cagcacacgg
     3781 tcgcccgcca cgaggagctt cttgggagga acgtccatgg cgctcatcct tgttcgtgaa
     3841 tcgtgaccac ctcgagcacg cggagctttc tcgtggcggt cgggagccgc aggctcactt
     3901 cctcgcccgg cttgcgatcc ttgagtgccc ggcccagcgg cgaggccagg gagatatgcc
     3961 cggcatcgat gtccatcatc tcggccagca ccaacgtata ggtctcccga tcgccgcttc
     4021 cgacgtcctc gaccatgact ttcgagccga gcccgacccg gtcgcgcggc gcttcggtat
     4081 tggccagctg cgccagctgg gccaggcggt gatgcagttg gcccaaccgc gcctgcacca
     4141 gctgctggcg ttccagcgcc gccttgtact cggagttttc ccggagatcc cccattgcca
     4201 cggcgagcgc gatggcttgc ggaagcgtga ccgtaagttc ccggctcagc tcctcgatct
     4261 ccttgctcag cttgtcccgc atctgctcga tcatttgccg cagccgaaaa aagagtcggc
     4321 ccggcgaggg gtcgccgggc acggagggta ccggttcgta agatagcgag cgcggcgagc
     4381 tccggacagg ggagatacct tggacataag agggaactac ccatgggggg aacgcttttc
     4441 cctcgcactt ctcactgcga accgctcact ttgacggttg acccatcctt atgccgcggc
     4501 tagttttgcg ccggccaccc ccaacgccag gatcgcacta ctgatggaga cgaggacggg
     4561 tcccttccgg cgtctcgcgc gattcacccc cgcgctcggt ctcctcctct tccttgccgc
     4621 ttgcgcgcat aactatcccc agaccaccct caaaccacgc ggtgattttg cgcggctggt
     4681 ggatgggctc ttccggacga cagtctggtg ggccatcgtg gtgttcgtcc tggtcgaagg
     4741 cgcgctgctc atcgcgatct tcaagttccg cggccggccc gacgacccgg agcccaagca
     4801 ggtgcacgga aacacggtgc tcgaggtcgt ctggaccatc attccggcgt tcattctggt
     4861 gatgatcgcg gttccgacta tcaagaccat cttccggacc tccgactacg cggccggcga
     4921 tgtggtgcag atcgaggtga tcgggcacca gtggtggtgg gagttccgct acacggggct
     4981 cggcgtggtc accgcaaacg agctgcacgt tccggtcggc aagaccgtca accttcggat
     5041 gacgacggtg gacgtgctgc acagcttctg ggttccgcag ttcgccgcca agcgggacgt
     5101 gttccccagg cggcacaatc cgctctggtt caaggccgag gtcaccggat cgttcagcgg
     5161 gcagtgtgcc gagttctgcg gcgcgcagca cgggcggatg ggtttccggg tgatctcgga
     5221 atctcccgag gaattcgcag tctgggtgga gcgccagcgg gtgggctcgc cgctggtgaa
     5281 ccagggcaaa gtggccgccg attcggtgcc gccgatcgat tcgatcgaag tggccggccg
     5341 cgcgctcttc agcggcgggg gttgcatcgg ctgccacgcg ctggtgggaa ccccgctcgc
     5401 gggccagact tcactcaagg gaccgaacct gtcccacgtc ggcagccgga ccaccatcgt
     5461 cgcggggatg ctgcagaaca cgccggagaa cctccggaaa tggctcagca atccggactc
     5521 ggtcaagaag ggtaccttaa tggttttacc ccgcaagctc accgacgcgg agctcacgct
     5581 gctggtcgcc tacctccgct cgcatcagta gggttaccgc catggccact tcggttctcg
     5641 atcacgcccc agccgtccac gccgagaaga cgggaatctg gagctggatc acgaccgtcg
     5701 accacaagcg gatcgggatc ctctacggga ccaccgcgtt catcttcttc ctgatgggcg
     5761 gcatcgaagc gctgatcatg cgcatccagc tgatgaagcc cgacaacacg ctggtcagcg
     5821 cggagctctt caactcgctc ttcacgatgc acggcacgac catgatcttc ctcggggtca
     5881 tgccgctgtc cgcgatgttc ttcaactatt tcatcccgct gcacatcggg gcgcgggacg
     5941 tggcgtttcc ccgcctcaat gcgttcagct attgggtctt cctgctcggc ggcctcttca
     6001 tcaacttcag ctttctcctc aatgccgctc ccaacgccgg ctggttcggc tacgccaatc
     6061 tcaccgagaa tacctattcg ccgggcctga acaccgactt ctgggttctg ggcctgcaga
     6121 tcctgggcat cgcctcgatg gccgcggcga tcaatttctt cgtgaccatc gtgaacctgc
     6181 gggcgccggg tatgaagatg ctccggatgc cgatgttcgt ctggatgagc ttcatcaccc
     6241 agattctgct gttgctggcg ttccccgtca tcacggtggc gctggtgttc ctgatgatgg
     6301 accgccactt cgggagccat ttcttcctcc ccgagggggg aggcgacccg gtgctctggc
     6361 agcacctctt ctggatcttc gggcacccgg aggtctacat cctgatcctt cccgccttcg
     6421 gcatcgtgtc ggaggtgctg cccgtcttct cgcggaaacc gctcttcggc tacactgcga
     6481 tggtcttctc gggcgcgttc atcgcctttc tcggattcgg ggtgtggagt caccacatgt
     6541 tcgcgaccgg gatgggcccc ttcgcggatt ccttcttcgc gatctccacg atgctgatcg
     6601 cggtgcccac cggagtgaag atcttcaact ggctgggcac cctgtggggc ggctcgctgc
     6661 aattcaagac gccgctgtac ttcgcgatcg gcatggtcgc gatgttcatc atcggcgggc
     6721 tgtcgggcgt catgcacgcc tccccgcccg ccgacctgca gcagaccgac acctacttcg
     6781 tagtggcgca cttccactac gtgctctttg gcggctccat cttcggcctc accgcgggcg
     6841 catactactg gttccccaag atgttcggcc ggatgctgca cgagggcctc ggcaagctgc
     6901 atttctggct gatgctgatc gggttcaacc tcaccttctt cccgatgcat ttcctggggc
     6961 tcaacgggat gccgcggcgg gtctatacct atccggccga gctcaacctc gagttctgga
     7021 atcggatcca gacctggggc tcgttgctgc tggggttatc gttcctgatc ttcatttaca
     7081 atatcttgaa gacgatgcgc cgaccggccg acgccccggc cgatccgtgg cgcggtgcca
     7141 cgctggagtg ggcgatcccc tcgccgccgc aggagttcaa cttcggcgag gtgccgccgg
     7201 tccacagctc gacgccggtc tgggatctgc gccgggccag tggtgggcaa ttgccggagc
     7261 ctcgccgagt gagcggcgcc ggcatccacc tgccgcggcc ctcgatctgg cccgcggtca
     7321 cggcggtggg cgtgctgggc gtgatcggca gcattctctt cacccacgcc ttctcgcact
     7381 ggtatttcat cacgctgagc ggcgcggcga ttctctttta cggcgtctac cgctgggcct
     7441 tcgaacctcc cttcccggag cactagctcg tgagccacgc gattcctgcg ccgcacgcgc
     7501 tgtcggaggg atcccagcac gactcgcatc ccaccacgac cgggattccg agccggaagg
     7561 tggcgttgtg gaccctgatc gggtccgaat gcctcttctt tgcgtcgctg atctcgacct
     7621 acctggtcta caagggcaag agtctggtcg gcccgctgcc gcataccgag tcgcagtgcg
     7681 tgctgcacgg gaaaatgcag acctgcgagc acatcttcga gatcccgctc gtcaccaccg
     7741 gcaccgcggt gctgcttttc agctcgttct tcatcgtgct ggcgctctac ggcgcgcaga
     7801 ggggcaagcg gaagatgctg gtcggctggc tcgccgccac ggtgctcgcg gggatgttct
     7861 tcgtgggaat gcaggtctac gagttccagc acttttatca caagggcatg ggctacggta
     7921 ccaacctctt ttcctcgacc ttcttcacgc tgacgggctt tcacggcagc cacgtcaccg
     7981 tcggggtgat ctggctcgct acgctgttgg tgctcgccat caagggcaag attccgcccc
     8041 agaaagcgct caatctcgag agcgccgcgc tctactggca cttcgtggac gtggtctgga
     8101 tcgtgatctt ccccaccgtc tacctcatga ggtgagcgct tcatggaagc ccaggacgcc
     8161 cacgcgcacg accagcacgc acaccccacc cccgcgctct atctcaaggt cgcgctggtc
     8221 ctgttcgtgc tcacggcgat ggaagtcctg gcgttcgagg cgggccgggg cgggctcggc
     8281 gcctcgctgc gaccggtctt cgagccgatc gtagtgctgc tgctcgtggt gctttccgcg
     8341 gccaagtttg ccctggtggc catgttctac atgcacctga agcaggatcc ccggctgctg
     8401 gcgaatctct tcgtctttcc gctgctgatt gccgcggtca tcatcgcggc gctgatcgta
     8461 ctgttttcct actggcgggc ggtgggggcg cactgatcgc gccgttctcc gtcgagtggt
     8521 cgctgcatcc ttcggttctc atcggcgtcg cagcgcttgg ggcgctgtac ctctacgcca
     8581 tcggcccttt tcggcgccgc ctggagctcg gccccccggt tgaaccctgg cggccgcttt
     8641 gcttcttcgg cggtctcgcc gtcatcctga tctcgctcaa cggccccatt cacgacctca
     8701 gcgaccgcta cctgttctgg gttcacatgg cgcagcacct gctgctcacg ctggtgctgc
     8761 cgcccttgct cattgccgga ttaccggggt ggctggtcga gcaggcggtc cggcggagag
     8821 ccggccgggc ggtcgcgcgc gcgctcaccc atcctgtgtt cgccgggttc ctcttctcag
     8881 ccacgttgct cgtctggcat acggcgggtg cctacgatct catgatgcgg aaccattcgg
     8941 tgcacgtggt gacgcatctc atgttcatgg tgaccgccgt gctgctctgg tggcccgtca
     9001 tgagtcccgc ccgttcgctc ccgcggctct ctccgggaat gggaatgctc tacctcttcg
     9061 tggtacagct tcccatgcag ctgcttgggg cgattatcac gttcgcggac cgcccgctct
     9121 acccctggta ccttgcggcg ccacgcacct ggggcctctc cccgctcgat gatcagaagc
     9181 tcggggggct gctcatgtgg attccaggca acctctggat ctggggggcg atgtcggtgc
     9241 tcttcttccg gtgggcgagc gcagagcgga acagcgtgaa cagtgaaccg tgaaccggaa
     9301 cgacctggca gggcagttcc cgttcactgt tcactgttcg cggttcactg ttaccgccac
     9361 accgccagaa tgaccgccat cacgatcaga tacaccagct gatatccggc gtcgatgaga
     9421 aacgcggcca gcggcttacc ggagtacaga ttcgaggtca gcccgatcgt cgcggcaaat
     9481 cccagccagg tgattccgcc cagctttacg ccgccaagag cgcccgtgac ccccacccgg
     9541 ctgatcagga cggccatgac ccaggcggtg accaggaagc acacgaagct gatcgcgtag
     9601 gtcttggtca tttgctgccg catcgccgcc actttctcgg gtgtatggcc ctgggccgcc
     9661 acccactggc gcgcgaacaa tgcgggggag taccagaggg ctccaagcat gaatgcggca
     9721 acgcccgcta ccacgacggc gaggtaattc acggtgaaag gcggcatgct gcctccggtc
     9781 tggggaagga tggacgcagg ggtatcccct ttttcagggt ggagcgggag atacgttccc
     9841 acccaggatg ggaagcgtca agggcgagtt agcgtgccgc gaaggtgtcg caggcggaaa
     9901 gccgtccgct gttgagtccc tgccggaacc actggctccg ctgctccgag ctgccgtggg
     9961 tgaatccctc ggggctgatg cgtccgctgg acatccgctg gacgcggtcg tccccgacgg
    10021 ctgccgccgc gttgagcccc tcctctacgt ctccggtctc gagcttccca cggcgtgccg
    10081 ccgagcttcc ccagacgcct gcgtagcagt ccgcctgcag ctcgaaacgc accgagagct
    10141 cgttggcctg cgcgggacgg ctgccctgga gctggcggag ctgcgcctcc gtgcccagga
    10201 gagtctggac gtgatgcccg atctcatgcg ccagtacgta ggcctgcgcg aagtcacctg
    10261 gagcgccgaa acgctcggca aggtcctgat agaagcccaa gtcgatgtac acacggtgat
    10321 cgccgggaca gtagaaggga ccggtcgcgg cttcggcaaa gccacaagct gattcgatcg
    10381 cgtcgcgaaa cagcaccagg cgggcgtgct cgtagcgggt gccggcctgc tcgggaagag
    10441 tctggtccca ggtggcctgg acatcgtcca gcacgaatcc gatgaagctc ttgagttttt
    10501 cctcttcggg agaggcttcc accggcccag cggcaacctg accggggccg ccacccattc
    10561 cgaccagcga gaagaaatcc tgtttgaaga cgacgctcag caccaggaga aggagcagcc
    10621 ctccgagtcc gatgcgtccc ggcagcctga accggccacc cgatcggccc cgcaggtcct
    10681 cgatgtcggg gctgcttcct cccggcgtcc agcgcatgcg tcgtcccgtc cgatcatgtg
    10741 gtctgagccg gccggcggat gcttcccagc gcgacacccg cccacccggc cagaaacgcg
    10801 acgccaccga acggggtgat cgcgcccagc cagctccgac ccgtcagtgc aaggacgtac
    10861 aggctcccgg aaaacagcac gatgccggtg aggaaacagg cgcaagttgc ccggagcagc
    10921 ggaggccgtt gcatcaagag ctggctcgcg accagcagcc caagagcgtg atacatctga
    10981 tagcgcgcgg cggtctcaaa cagagttagc gcggctggat tcagccggtc acggagtgca
    11041 tgtgcgccga atgcgccggc cagcaccgcg agggctgcga gcagcgctcc cgcgaccgtg
    11101 gcgccccgtc gccaccgctc accgctcacc gatcgtcccc gctccctcga cccccattcc
    11161 catagcgtgg tagccattgt ccacgtagac cacactgccc gtgatgccgg ctgcgagcgg
    11221 gctcgccaga aaggcggcgg tgtgcccgac gtcgccggcc tcgagctccc gggtgagcgg
    11281 cgcgttggct ttggtgtacg cgatcatccg ctggatcagt ccgatggcgc tcgccgctcg
    11341 cgaagcgagc ggccccgctg agatcgtgtt gacccgcacc ccgaaccggc gtcccgcctc
    11401 gaacgcgagc gttcgggtat ccgactcgag cgctgccttt gccgaagaca tgccgccgcc
    11461 gtagcccggg attacccgct cgccggccat gtaggtgagc gacaaatagg agccccccgc
    11521 gcgcatcaag ggactgagct ggcggaccag ggcgatgttg ctgtaggcgc tcacgcttac
    11581 cgcctcgaga tatcccttcc ggctggtatc gagcaagggc ttc
//
LOCUS       DASYRV010000093         2993 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2114017, whole genome shotgun sequence.
ACCESSION   DASYRV010000093 DASYRV010000000
VERSION     DASYRV010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2993)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2993)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2993
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2114017"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..432)
                     /locus_tag="VGQ24_02265"
     CDS             complement(<1..432)
                     /locus_tag="VGQ24_02265"
                     /inference="COORDINATES: protein motif:HMM:NF014662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HEV8453685.1"
                     /translation="MRDLLPDYDRFLTTGKPFGRAVVTSVWGSAPRPEGSCMLASVDG
                     AIAGSVSGGCVESATALEIEQAIARGSPKLVTFGVTDERAWEVGLACGGTIKVFVEPA
                     VRPEVLDAARGRGGEVVATIIAGPGLGRSMRIFEDGSIAGGL"
     gene            complement(442..1572)
                     /locus_tag="VGQ24_02270"
     CDS             complement(442..1572)
                     /locus_tag="VGQ24_02270"
                     /inference="COORDINATES: protein motif:HMM:NF017569.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEV8453686.1"
                     /translation="MREVDGEVMAANVMEFGRLLRRAGLDVDLAQTAAFLKTLTLIGM
                     DDRRDVRVAGRTIFVRRREDRPVYDAAFDLFWRRPGGSSRLAGQLPRIRQSTDRGSPG
                     GAAPPDSPPDDEPVATVRALAASSREVLRRLDFAALSSEESRDADAMLAALRPRLSMR
                     RARRSRVEHSGHRPATRFMLRGALGTGGEALRWRWLRRSLRPRPLVLVCDISGSMERY
                     SRFMLRFAHALRRTGAPVEVFVFGTRLTRITRQLAARSADAALQRVADRVVDWNGGTR
                     IGESLRELNQRWVRRTVRSGALVLLVSDGWERGDPAVLAREMARLQRSCHRLIWLDPL
                     ASRAGFEPATVGLKAALPFVDDFVPCGSVASLEQLAERLAAL"
     gene            1616..2281
                     /locus_tag="VGQ24_02275"
     CDS             1616..2281
                     /locus_tag="VGQ24_02275"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEV8453687.1"
                     /translation="MRRFECRAVLFDLDGVLVDSAAYIEDQWRRWARAKGLPVEPFLR
                     VCHGRRALETIQLAAPHLDAEAEVAAFVPDDAGNGDTLKPVEGASRLLQTLPMGSWAV
                     ATSGTRAAATERLRDAGLPIPGVLVCAEDVLHGKPSPDVYLLAAAGLGVSPADCIVVE
                     DAPAGVEAARAAGMGVVALTTTHRPEDLPADARTSSLARIHLGRIEHHARGPHFLELL
                     VLD"
     gene            complement(2264..>2993)
                     /locus_tag="VGQ24_02280"
     CDS             complement(2264..>2993)
                     /locus_tag="VGQ24_02280"
                     /inference="COORDINATES: protein motif:HMM:NF019348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEV8453688.1"
                     /translation="RTLSQVLGAELIRLQCYEGLDINTAVYEWDYPRQMLEIRLLEAR
                     GEAKSAATRDIFSQEFLIRRPLLQALESKGAEPPVLLIDEVDRADEEFEAFLLELLSD
                     FAVSIPEIGTIRATRPPRVILTSNRTREVHDALKRRCLYHWIDYPTPERELAILRARL
                     PDVPEALGREIVGFVQRLRSADLTKAPGIAETLDWAAALTALGTDRLEPAQVEQTLGV
                     LLKYQEDVAAMRTGGARRILVQDQ"
BASE COUNT          480 a         1049 c          984 g          480 t
ORIGIN      
        1 cagtcccccc gcgatgctcc cgtcctcgaa gattcgcatc gagcgtccca gccctggacc
       61 cgcgatgatc gtggcgacca cctcgccgcc gcgaccacgg gccgcgtcca gcacctcggg
      121 ccgtaccgcc ggctccacga agaccttgat cgtacccccg caggcgagtc cgacctccca
      181 ggcgcgctca tcagtgacgc cgaacgtcac cagcttgggg ctgccccggg cgatggcctg
      241 ttcgatctcg agggcggtgg cactctcgac gcacccaccc gataccgagc cggcaatggc
      301 tccatccacg gatgcgagca tgcaggagcc ttcgggtcgc ggcgccgagc cccacacgct
      361 ggtcacgacg gcgcgtccga atggtttgcc ggtcgtgagg aaacggtcgt aatcggggag
      421 aagatcgcgc atgcggtgag cttacagtgc cgccagccgt tctgccaact gctccaggga
      481 tgccacgctc ccgcagggca cgaagtcgtc cacgaacggc agcgcggcct tgagcccgac
      541 agtcgcgggc tcgaacccgg ctcggctcgc cagcggatcg agccagatca gacgatggca
      601 ggagcgctgg agtctggcca tctcgcgtgc gagcactgcc ggatcgccgc gctcccaacc
      661 atccgagacg aggagtacga gagcgccgct ccggacggtg cgccgcaccc agcgctggtt
      721 cagctcgcgc aggctctcac cgatccgggt cccgccattc cagtccacca cccggtccgc
      781 cactcgctgc agcgcggcgt cggcacttcg ggcagccagc tggcgggtga ttcgggtgag
      841 gcgggtcccg aagacgaaga cctcgaccgg cgcaccggta cgcctgaggg cgtgggcaaa
      901 gcggagcatg aatcggctgt accgctccat cgacccgctg atatcgcaca ccagcacgag
      961 tggccggggc cggagagagc ggcgcagcca tcgccagcgg agcgcctctc ctccggtgcc
     1021 gagggctccc cgcagcatga agcgcgtagc cgggcggtgg ccgctgtgct ccacccggct
     1081 ccggcgggcc cgacgcatcg agagtcgggg acggagggcc gcaagcattg cgtccgcatc
     1141 ccgcgattcc tcggagctga gcgcagcaaa atcgagtctc cggagcacct ccctcgagct
     1201 cgctgccaga gcccgcaccg tggccaccgg ctcgtcatcg ggcggtgaat caggtggggc
     1261 tgcgccgcct ggcgacccac ggtcggtact ttgccggatg cgtggaagct ggcccgccag
     1321 gcggctcgac ccgccaggcc ggcgccagaa cagatcgaac gctgcgtcgt acaccggccg
     1381 gtcttcccgg cggcggacga agatggtgcg gcccgcgacc cggacgtcac gccggtcatc
     1441 cattccgatg agggtgagcg tcttgaggaa agccgctgtc tgcgccaggt ctacatccag
     1501 gccggcccgc cgtaacagac gtccgaactc catgacattt gcggccatta cttcaccatc
     1561 gacttcacgc atgggttcta accggatcga aatttgcagg caatcttctc ctgccatgag
     1621 acgcttcgaa tgtcgcgcgg tactgttcga tctcgacggc gtgctggtag actccgccgc
     1681 ctatatcgag gaccagtggc gccgctgggc cagggccaag gggctccctg tcgagccgtt
     1741 tctgcgcgtc tgtcacggcc ggcgggcgct cgaaaccatc cagcttgccg ctccgcacct
     1801 cgatgccgag gctgaggttg ccgcgtttgt gccggatgac gcggggaatg gtgacacttt
     1861 gaaacccgtc gaaggagcct cccgcctgct gcaaaccctc cccatgggga gctgggccgt
     1921 cgctacctcg ggcacccgcg cggctgcaac cgagcgtctc agggacgccg gcctcccgat
     1981 tcccggcgtc ctggtatgtg ccgaagacgt gctgcacggc aagcccagcc ccgatgtgta
     2041 cctcctggcc gcagccggtc tgggcgtctc tccggccgac tgcatcgtcg tggaggatgc
     2101 gccggcagga gtcgaggcgg cccgagcggc cggcatgggt gtcgtggcgc tcacgaccac
     2161 gcatcgtcct gaagatctcc ctgcggatgc gcggaccagc tcgctcgctc gtattcatct
     2221 gggccggatc gagcaccacg ccagaggccc tcattttctc gagctactgg tcctggacta
     2281 gaatccttct cgcgcctccg gtccgcatcg cggcaacgtc ctcctggtac ttgagcagaa
     2341 cgccaagcgt ctgttccacc tgagccggct ccagccggtc ggttcccagc gccgtgagcg
     2401 cggccgccca atcgagagtc tcggcgatac ccggcgcctt ggtcaggtcc gccgagcgga
     2461 gtcgctggac gaagccgacg atctcgcggc ccagcgcctc gggcacatcc gggagccggg
     2521 cccggaggat cgccagctcg cgttcggggg tcggatagtc gatccagtga tagagacagc
     2581 gccgcttgag cgcgtcgtgc acctctctcg tccggttgct ggtaaggatg acgcggggcg
     2641 gacgcgtggc ccgtatggtc ccgatctcgg gaatgctgac cgcgaagtcg ctcagcagct
     2701 ccagcaaaaa ggcctcgaac tcctcatccg cccggtctac ctcgtcgatg agcagtaccg
     2761 gaggctccgc tcccttgctc tcgagggcct ggagcagtgg ccgccggatc aggaactcct
     2821 ggctgaagat gtcccgcgtg gccgcggact ttgcctcgcc gcgagcctcg aggaggcgga
     2881 tctccagcat ctgccggggg taatcccact cgtacacggc ggtgttgatg tcgagtcctt
     2941 cgtagcattg cagccggatc agctcggcac cgaggacctg ggagagggtc cgg
//
LOCUS       DASYRV010000094         9768 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_37658, whole genome shotgun sequence.
ACCESSION   DASYRV010000094 DASYRV010000000
VERSION     DASYRV010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9768
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37658"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..450
                     /locus_tag="VGQ24_02285"
     CDS             <1..450
                     /locus_tag="VGQ24_02285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453689.1"
                     /translation="SRMEVTHMPSFEAEPGYKPSREAVGILCERLQRMGVSMSESAAR
                     SLLESVLAVEGPRLDALTRGTLQASLEAIQNAAEAALIALTGAPSGPTHRDYELSFPP
                     VGQSVSVSDPHRHVPSPHQVAPGKEDHPEHSAEEDEPRPVFRRRRGR"
     gene            459..1715
                     /locus_tag="VGQ24_02290"
     CDS             459..1715
                     /locus_tag="VGQ24_02290"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEV8453690.1"
                     /translation="MDTQVEPRISSEEEIYRLRTTASRRFFMEAREYLPGGDSRSTLF
                     YQPYPAVMDRGEGCWLYDLDGNRLLDFTGNHSSLVHGYGHPAIVEAVQHQLGKGTCFP
                     GSTEPQLRLAKLLCERIPSVEQARFTSSGTEASMNAIRAARAFTGRARIAKVEGGYHG
                     LAADATADVVVLPFNDIEAAAGILEAEGEQLAAVIVEPLLGSAGMIPAERDYLEMLRE
                     ITRRLDIILIFDEVVSFRIAAGGAQEYFGVVPDLTCLGKLIGGGFPLGAFGGRADIMA
                     LFDPTHGPPTLPHPGSHNANPIGMVAGAVTLELLSPLAIELLNARGTTVRRDLAAAFA
                     DAGIAAQITGLGSLFAIHLTGRPVRSSRDTLGSDTELRHRIFLGLFNESVQIDPRGVG
                     NVSTAIGQDEVSRFGEAIRSVLSRMV"
     gene            1835..2068
                     /locus_tag="VGQ24_02295"
     CDS             1835..2068
                     /locus_tag="VGQ24_02295"
                     /inference="COORDINATES: protein motif:HMM:NF022716.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3072 domain-containing protein"
                     /protein_id="HEV8453691.1"
                     /translation="MSRKTNKKQQSDRQSNAIKDPDEWTTGEEPMTGAQESYLHTLAT
                     EAREEVEPDLTKAEASKRIDELQQKTGRGDGAR"
     gene            complement(2095..2517)
                     /locus_tag="VGQ24_02300"
     CDS             complement(2095..2517)
                     /locus_tag="VGQ24_02300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453692.1"
                     /translation="MSAEPAPATALETAADTLLSQRSGRVHWVVVITRAPLPEDQVPP
                     GTTLLTRWWHPRDHCWSQNAFEALDHAIRLFVDESGWVLRQQQALDVPQAHELLFEAR
                     REDFSRPSTEQILHEVGLTPEDVANLMHRVDGEGEAPP"
     gene            complement(2577..3665)
                     /locus_tag="VGQ24_02305"
     CDS             complement(2577..3665)
                     /locus_tag="VGQ24_02305"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEV8453693.1"
                     /translation="MSSLEARTHAALPGRRSVSLLIVASVAAGIALDFAQEIFIPIAL
                     GLLFAALFRPVVRVLSGFRIPAPATATLVVLGCLGVFGTSVLLFSRPVRAWISEAPRT
                     LAAARGKLEKLRRPIKQVSQAVEKVQNEVTGAEEKPHQPQAAADASSPAIPPFVGRVF
                     ATTTGILGTLVSTIVIVFLLLATGDLFTRKLAAVIPKPVTGTAVGAVDDAEAVMRRYL
                     VVTALINAGQALVVVLVMTLIGMPNPALWGLLTFVFEFLPYIGALFMVVALTITGFAT
                     FDSLGHVLLAPIAYITISTIQNNAVSPFAYGSGLRVNPLVVLLGVLVGWFLWGVAGAF
                     VAVPLLAAVKLFAVRSGRDSRLATILDE"
     gene            complement(3714..4259)
                     /locus_tag="VGQ24_02310"
     CDS             complement(3714..4259)
                     /locus_tag="VGQ24_02310"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEV8453694.1"
                     /translation="MSATPTLCTARLVLGAFEADDAPELQRLAGAREIADTTVAIPHP
                     YDLDHALAWIGNQRKEAARGRAANFAIRLSAGSPVIGSVGLRDIDAEHLQAELGFWIG
                     KEWWGHGYAREAAAAVIRFGFETLGLNRICAHHMLRNPAAGKVLQHVGMLREGVLRQR
                     VRKWGIHEDVVLYAILRDDQN"
     gene            complement(4268..4618)
                     /locus_tag="VGQ24_02315"
     CDS             complement(4268..4618)
                     /locus_tag="VGQ24_02315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453695.1"
                     /translation="MAEPSFAQQIATLNSTLRGIEVRLALGRPPVEGFEEFKSVLDDM
                     RHRLWGLLGAADDEYKTSQERFRIRRATELCRGLVADLRSGAVTGRHSDLPGLREAAV
                     ELGQSIELARTRVS"
     gene            complement(4639..5355)
                     /locus_tag="VGQ24_02320"
     CDS             complement(4639..5355)
                     /locus_tag="VGQ24_02320"
                     /inference="COORDINATES: protein motif:HMM:NF019032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1499 domain-containing protein"
                     /protein_id="HEV8453696.1"
                     /translation="MRLRWVPALLGLLAAALVLGAGPGTRFGLWNFRTGFSALRWGAY
                     AGLAAVVSAVLLLIVRPKSGGVIPLVLGLVLGLGAAFVPWRWMQQARRVPPIHDITTD
                     LDRPPKFVAILPLRAEAPNPATYGGSEVADAQRRSYPDIKPLLLNVPAGAAYNRALAS
                     ARSMGWELVAADSMAGRIEATATTPWFGFKDDVVVQVRPEGTGSRIDVRSVSRVGKSD
                     LGVNAKRIRAYLADVASRKS"
     gene            complement(5390..5593)
                     /locus_tag="VGQ24_02325"
     CDS             complement(5390..5593)
                     /locus_tag="VGQ24_02325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453697.1"
                     /translation="MATKLDKTIKRELELDGKLYTVAISPEGVKVTPKGARKGQEISW
                     SSIVSGETELRRDLNASVDAYRE"
     gene            5739..5963
                     /locus_tag="VGQ24_02330"
     CDS             5739..5963
                     /locus_tag="VGQ24_02330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453698.1"
                     /translation="MKNEREARLKPEFAHLYPGLKPRTWYNAAWLSARQFARVPCDGR
                     AASIAKMLNDSHFEFRGGRPRRNRAAERDR"
     gene            complement(5997..6452)
                     /locus_tag="VGQ24_02335"
     CDS             complement(5997..6452)
                     /locus_tag="VGQ24_02335"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEV8453699.1"
                     /translation="MSDPLLLLLEKDRIIDLINQLFIATDKRDWPAVRRCFSEMVLLD
                     MTSLAGGAPSRVTPEQIAAGWEEGLRPIEAVHHQAGNYRVDVRGDQATAFCYGIASHY
                     RSTRSARNTRVFVGSYDFHLLRMEGRWQIDSFRFNLKYIDGNADLEREV"
     gene            6755..7309
                     /locus_tag="VGQ24_02340"
     CDS             6755..7309
                     /locus_tag="VGQ24_02340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453700.1"
                     /translation="MRVLTVIPLSAAVGAIVAVLPAGLLTGTAPRTQAYSNSCRHPIG
                     AAVAACADSEPQEGPGQRPLPAGDAPAFLFASVQPIKAPESWRTVYREVERCAGMVGD
                     YEQVRWAVMDAPLQGPKGPTYGFNVGSRIVLVRNDTTYLRHEMLHHVLQTAGWQPRTL
                     QPGEHYTIADLHPVSLFGLCTGGR"
     gene            7319..8230
                     /locus_tag="VGQ24_02345"
     CDS             7319..8230
                     /locus_tag="VGQ24_02345"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEV8453701.1"
                     /translation="MIPYRTLGRTGERVSAIGLGGYHLGKPYLEEAESIRIIRTAIDS
                     GMTFLDNSWDYYDGHSEMRMGKALRDGYRHRAFLMTKIDGRDRTTAARQIDESLRRLQ
                     TDRVDLLQHHEVIRMDDSDRIFAAGGAMEAVLEAKRAGKVRYIGFTGHKDPDIHLKML
                     ETAAANHFHFDTVQMPLNVMDAHYQSFEKKVLPVLIQQEIGVLGMKPMGDAVILESRT
                     ATPIECLHYAMNLPTSVVITGCDSMERLEQGLSAAGSFRPMLPSEVDALLAKTARAAR
                     EGRYELYKTTHKHDGTQEHPEWLSGVS"
     gene            8462..>9768
                     /locus_tag="VGQ24_02350"
     CDS             8462..>9768
                     /locus_tag="VGQ24_02350"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEV8453702.1"
                     /translation="MRQTKSHRFLRSVAQSLLGSIGVVLVTYLGYRSHLDLPTTAFLC
                     LIVVVLVSLGGRFVPAAVTSIVAVLSVNYFFVPPLFTIGVAQPFDEIAVTAFLATALV
                     ISRLVARLRQSFSEVQALNERLQFVVDTIPTLVSRSRPDGSLDFINQRWRDYLGLSLE
                     EVKDWGWTAGLHPEDRERFVDQWRAALSSGRPLETEARMRRADGEFRWLWIHVVPLRD
                     PRGEIVSWYGTSTDIEERKRAEGRARQADRERHIAIDTIPALLWSTLPDGSSDFNNQP
                     WLEYTGLSSEEARDWGYKSVIHPEDYQRLVTEWAAHFSTGEPIEDEARLRRADGEYRW
                     FLHRAVPLRDEQGNIVKWYGTSTDIEDLKRAETVLRDHARLLDLTHDTVFVRNMSDAI
                     TYWNRGAEALYGWSRDEAVGKISHQLTQTILPAPLEEINEELLR"
BASE COUNT         1808 a         3160 c         3085 g         1715 t
ORIGIN      
        1 agcagaatgg aggtgaccca catgccctcg ttcgaggccg agcccggcta caagccgagc
       61 cgtgaggccg taggaatcct ttgcgagagg ctgcagcgga tgggtgtttc gatgagcgaa
      121 tcggcggcgc gtagtctgct cgaatcggtc cttgccgtcg aaggtccccg gctggacgct
      181 ttgacacgcg gcaccttgca ggcctcgctg gaggcaattc agaatgcggc agaggctgcg
      241 ctgatcgcat tgaccggagc accgtcagga ccaacccatc gcgattacga gctgtccttc
      301 ccgccagtgg gtcagtccgt gtcggtttcg gacccacacc ggcatgtgcc gtctccccac
      361 caggtggccc caggcaaaga ggaccacccc gagcattcgg cggaggagga tgagccccgc
      421 ccggtgttca ggcgccgccg cggccggtga gcacgcgaat ggacacccag gtagaaccga
      481 gaatctcgag cgaagaagag atctaccgcc tccggacgac ggcctcacgc cgcttcttca
      541 tggaagctcg cgaatacctg cccgggggtg actcccgaag cacgctgttt taccagccct
      601 atcccgcggt catggatcgc ggggaagggt gctggctata cgacctcgat gggaatcggc
      661 tgctcgactt caccggcaat cattcctcgc tggttcacgg atacgggcat cccgccatcg
      721 tcgaagcggt tcaacaccag ctcggtaagg gcacctgctt tcccggatcg accgagccgc
      781 agctccggct tgccaagctc ctgtgtgagc gcatcccgtc cgtggaacag gctcgcttca
      841 ccagctccgg caccgaagct tcgatgaacg cgatccgggc agcacgtgca ttcaccgggc
      901 gagcccgcat tgcaaaggtc gaaggcggct atcatggtct ggcggccgat gcaaccgccg
      961 acgtggtggt gctgccgttc aatgatatcg aggccgcggc gggcatcctt gaagcggaag
     1021 gtgagcagct ggccgcggtt atcgtggagc ctctgctcgg ctcggcaggg atgatcccgg
     1081 ccgaacggga ctatctcgag atgctccggg agataacccg ccgtctcgat atcatcctca
     1141 tctttgacga ggtcgtgagc ttcaggattg ccgcgggcgg cgcgcaggag tacttcggcg
     1201 tcgtccccga tctgacctgt cttggcaagc tgatcggggg agggtttccc ctgggcgcct
     1261 tcggtgggcg cgccgacatc atggcgctgt tcgatcccac ccatggccct ccgacccttc
     1321 cccaccccgg cagccacaac gccaatccga tcggcatggt agcgggggcc gtcacgctcg
     1381 agctgctcag cccgctcgcc atcgagctgt tgaacgcgag aggcacgacg gtcaggcgtg
     1441 acctggcggc cgcctttgcg gacgccggga tcgccgctca gatcaccggc cttggctcgc
     1501 tgttcgccat tcacctcact ggccggccgg tcaggagctc tcgggacacg ctgggctcgg
     1561 acaccgagct acgccaccgg atttttctcg gtctattcaa tgaaagcgtg cagatcgatc
     1621 cccgcggggt tgggaacgta tccaccgcga tcggtcagga tgaagtcagc cggtttggcg
     1681 aggcaatccg atcggtgctc agccggatgg tgtgacacaa gtcacacgat agcagcctgt
     1741 tatgtgtggt ggctccttgc gaagaattgt ggtttcggct tcctttcgga tcgtagtcct
     1801 ggtctcacca tcaattggat gaggagagaa accgatgtcc aggaagacca acaagaagca
     1861 gcaatccgac cggcagtcca acgcgatcaa ggatccggac gagtggacta ctggtgaaga
     1921 gccgatgacc ggcgcccagg aatcgtatct gcatacccta gccaccgaag ctcgggagga
     1981 ggtcgaaccc gacctcacga aggccgaggc atcgaagcgg atcgatgagc tccagcagaa
     2041 gactggtcgt ggcgacgggg cacggtaacc cagccgtcag gcgttccccc caggtcaggg
     2101 gggtgcctcg ccctcaccat cgacacggtg catgaggttg gccacgtctt caggcgtgag
     2161 tccgacctca tgcaatatct gctccgtgct gggccggctg aagtcctcgc gtctggcctc
     2221 gaacagcagc tcgtgggcct gcggaacatc gagcgcctgc tgctgtcgga gcacccaccc
     2281 actctcgtcc acgaacaacc gaatggcatg atcgagagcc tcgaaggcgt tttgactcca
     2341 gcagtgatcc cgtgggtgcc accacctggt gaggagggta gtgcctggtg ggacctggtc
     2401 ttccggcagt ggtgcgcggg tgattaccac cacccagtga acccgtcccg accgctggga
     2461 gagcagggtg tcagcggcgg tctcgagcgc ggttgccggc gccggttccg cactcacggg
     2521 taactccctg ttgtcaggtg gcatataccc tcagcctgga tatagccggc gccatttcac
     2581 tcatccagga tagtcgcgag ccgtgagtcc cgaccggagc gaacggcaaa gagtttcacg
     2641 gcggcgagta gcggcaccgc gacgaacgcc cccgccactc cccatagaaa ccatccgacc
     2701 aggacgccga ggagaacaac taacgggttg acccgtaatc cgctgccgta ggcgaagggg
     2761 ctcacggcat tgttctgaat cgttgatatc gtgatgtagg cgatcggcgc gagcaggaca
     2821 tggccgaggc tgtcgaaggt ggcgaaccca gtgatggtca gcgccacgac catgaacaga
     2881 gcaccaatgt agggcagaaa ctcgaacacg aatgtcagca gaccccaaag ggccggattg
     2941 ggcatcccga tcagcgtcat caccagaacg acgaccaggg cctggccggc gttgatcagg
     3001 gctgtcacga cgaggtatcg cctcattact gcctcggcgt cgtccaccgc gcccacggcc
     3061 gtgcccgtga ccggcttggg gatgaccgcg gcgagcttgc gggtgaagag gtcacccgtg
     3121 gcgagcagca gaaagacaat cacgatggtt gagaccagag tcccgagaat gccggtcgta
     3181 gtggcgaata cccggccgac gaacggcggt atagccggac tggaggcgtc agcggccgcc
     3241 tgtggctgat ggggtttttc ctctgctccc gtgacctcgt tctggacttt ttcgactgcc
     3301 tgggagacct gcttgattgg ccgccgaagc ttttccagct ttccgcgcgc ggccgcgagg
     3361 gtcctgggag cctcgctgat ccaggccctg accggccgag agaacaggag caccgaggtg
     3421 ccaaacacac ccaggcaccc cagtaccacg agcgtggcag tagccggggc cgggattcgg
     3481 aagcccgaga gcacccggac taccggccgg aagagtgccg cgaaaagaag accgagcgcg
     3541 atcgggatga agatttcctg tgcgaagtcc agagcgatac cggcggcgac cgacgcgacg
     3601 atcagcaggc tgaccgagcg tctccccggc agggccgcgt gggtccgtgc ctcgagggag
     3661 ctcaccgggg aacctctaac atcctcatga gctagctccc gatccgggcg gccctagttc
     3721 tgatcgtctc gaaggatggc gtacagaacc acgtcctcat ggattcccca cttgcgtacc
     3781 cgctggcgta atacgccctc gcgcagcatc ccgacatgct ggaggacctt cccggcggcc
     3841 gggttgcgca gcatgtggtg ggcgcagatg cgattcaggc cgagagtttc gaacccgaaa
     3901 cggatgacgg ccgccgcggc ttcgcgagca tacccatggc cccaccactc cttcccaatc
     3961 cagaagccca gctcagcctg gagatgctcc gcgtcaatgt cgcgcaaccc gacagagccg
     4021 ataacgggcg agcccgccga taaacggatc gcgaaattcg cggctcggcc acgcgccgct
     4081 tccttgcgct gatttccaat ccaggccaag gcgtgatcca ggtcgtaggg atgcgggatg
     4141 gccacggtgg tgtcggcgat ctcgcgggcg ccggcaaggc gctgcagctc gggggcatcg
     4201 tcggcctcga aggcgccgag taccagacga gcggtgcaaa gggtgggggt ggcgctcacg
     4261 accaccacta cgagacccgg gttcgtgcga gctcgatgct ctggcccagc tctactgccg
     4321 cttcccgcaa gcctgggagg tccgaatgac ggcccgtcac ggcaccgcta cggaggtccg
     4381 cgaccaaccc gcggcacagc tcggtggccc gccggatccg gaatcgctcc tgggaggtct
     4441 tgtactcgtc gtccgcggcg cctaacaatc cccagagtcg atgccgcatg tcgtccagga
     4501 cgctcttgaa ctcctcaaac ccctccaccg gaggccgtcc gagcgccaaa cgcacctcga
     4561 tgccacggag cgtcgagttg agggtggcga tctgctgcgc aaagctcggc tccgccatcg
     4621 aatctccgcc taccagggtc aagacttacg gctggcgaca tccgccagat aggcgcgaat
     4681 cctcttcgcg ttcactccta gatcgctctt tccgacgcgg gagacggagc gcacgtcgat
     4741 ccggctcccc gtcccttcgg gccggacctg gactaccaca tcgtccttga agccgaacca
     4801 gggtgtcgtc gccgtcgcct cgatccggcc ggccatggag tccgccgcaa ccagctccca
     4861 gcccatgctg cgagccgaag cgagggcccg gttgtaggct gcgcccgccg gcacgttcaa
     4921 aagcagcggc ttgatgtcgg gatacgagcg ccgctgtgca tcagcgacct cggatccgcc
     4981 gtacgtggcg ggattgggtg cctcggcccg cagcggcagg atcgcgacga acttgggtgg
     5041 tcggtcgaga tccgtggtga tgtcgtggat cggcggcacc cggcgggcct gttgcatcca
     5101 gcgccagggg acgaacgctg cacccagccc gagaacgaga cccaggacca gagggatgac
     5161 gccgccggat tttggacgga caatgagcaa cagcaccgca ctcaccacgg cagccaaccc
     5221 tgcgtacgcg ccccagcgga gcgcgctgaa gccggtacgg aaattccaga ggccgaagcg
     5281 ggtgcccggg cccgccccca gcaccagcgc tgccgcgagc agtcccagca gcgccgggac
     5341 ccagcggagc cgcatggatt ctccttctgg ttggcctgcc tgtcgcggcc tactctcgat
     5401 aggcgtcaac tgacgcgttc agatcgcggc gcaattccgt ctcgccgctc acgatcgagc
     5461 tccaggagat ttcctggcct ttccgggcgc ccttgggggt cactttcaca ccctccggtg
     5521 agatggcgac cgtgtacagc ttgccgtcga gctctagctc gcgcttgatc gtcttgtcga
     5581 gtttcgtggc catgccgttc ctcaggtttg gatgaggcgc tgccagcgcg caattccctg
     5641 catctagcct cgccaagtat acgtagccgg gggcgccgcc gtcgagttgc gccaccgggg
     5701 gaggtcccta cctttagagt gtacccccag gacaacccat gaagaacgag cgcgaggccc
     5761 gtctcaaacc ggagttcgcc cacctgtatc ccgggctcaa gccgaggacc tggtacaatg
     5821 ctgcctggct ctcagcccgg cagtttgccc gggtcccctg tgacggccgt gccgcgtcga
     5881 tcgccaagat gctcaacgac agccatttcg agttccgggg cggccgtccc cgccgcaacc
     5941 gtgctgccga gcgggatcgc tgaccgaccc cggctcttag ctccccagct cctagctcac
     6001 acctcccgct ccagatccgc gttgccgtca atgtatttca ggttgaagcg gaagctgtca
     6061 atctgccagc gtccctccat tcggagcagg tggaagtcgt agctgccgac gaacacccgg
     6121 gtatttcggg ctgagcgggt cgagcgatag tgagatgcga tgccatagca gaatgccgtg
     6181 gcttgatccc ctcgaacgtc cacccggtag ttccccgcct gatgatgcac cgcttcgatc
     6241 ggccgcaatc cctcttccca tcctgccgcg atctgctccg gcgtgacccg gctcggagcg
     6301 ccgccggcga gcgaagtcat gtccaggaga accatctcgc tgaagcagcg gcgcaccgcc
     6361 ggccaatccc gtttgtcggt ggcgataaac agctggttga taaggtcgat gatgcggtcc
     6421 ttctccagca ggagaagcag ggggtcgctc atgcagtctc tcgtcagaaa cagagatttg
     6481 ggcgcaagga ccggacggcg cctggcattg ccgggccgat cttctgccgg tatgcatgac
     6541 tggcaaagac tcgcttcgca agagggggtt acccacgccc ggcccgatgt tgaggcaccc
     6601 ccgctgggct gcccctcgaa ccccccgact gggggagcac ccccatgcaa ggccggtgac
     6661 cgcttacctc ccaccttact gaaccggcct taagctctag acgcgtggtc tcgggcgccg
     6721 gccggcacag cggccatata gcggcggagc gcccatgcga gtcttaacgg taattccctt
     6781 gtcagcagcg gtcggagcga tagtggcggt gctccccgcc ggcctcctga ccggcaccgc
     6841 ccctcggacg caggcgtact ctaattcgtg ccggcacccg atcggcgcgg cggtcgcagc
     6901 ctgcgcggat tcggagccac aggaggggcc cgggcagcgc ccactcccgg cgggcgacgc
     6961 cccggcgttc ctgttcgcgt cggtccagcc gatcaaggcc cccgaatcgt ggcggacggt
     7021 ctatcgagag gtggagcgct gcgccgggat ggtgggagac tacgagcagg tccgctgggc
     7081 cgtcatggac gcgccactcc agggacccaa ggggcccacc tacgggttca acgtgggcag
     7141 ccggatcgtc ctggtgcgca acgacacgac ctatctccgg catgagatgc tgcaccatgt
     7201 tctccagaca gcgggatggc agcctcgtac gctccaaccc ggcgagcact acaccatcgc
     7261 cgacctacat ccggtgtcgt tgttcgggct gtgtacggga ggtcggtgaa gccgcggcat
     7321 gattccctac cgcaccctcg gccgcaccgg cgaacgggtc tccgcgatcg gcctcggggg
     7381 ctaccatctg ggcaagccct atctcgagga ggcagagagc atccgtatca tccgcaccgc
     7441 gatcgacagc gggatgacct tcctcgacaa ctcctgggat tactacgatg gtcacagcga
     7501 aatgcgcatg gggaaggcac tgcgggacgg gtatcgccac cgggcgtttc tcatgaccaa
     7561 gatcgacgga cgggaccgga cgacggccgc gcggcagatc gacgaatcac tgcggaggct
     7621 ccagaccgat cgtgtcgatc ttctccagca tcacgaggtc atccgcatgg atgactccga
     7681 tcgcattttt gccgcgggcg gtgccatgga agccgtgctc gaggcgaagc gcgcggggaa
     7741 ggttcgctat atcgggttca ccgggcacaa ggatcccgac atccacttga agatgctgga
     7801 aaccgccgcg gccaatcact tccacttcga caccgttcag atgccgttga atgtgatgga
     7861 cgctcactat cagagcttcg agaagaaggt cctcccggtc ctcatccagc aggagatcgg
     7921 cgtgcttggc atgaaaccga tgggtgatgc cgtcattctc gagagcagga cggcgactcc
     7981 gatcgaatgc ctgcactacg ccatgaatct gccgaccagc gtggtgatca ccggctgtga
     8041 ctcgatggag agactggagc aggggctcag cgcggcaggg agcttccgtc cgatgctccc
     8101 ctcggaggtc gatgcgctgc tcgcgaagac cgcccgggcc gcgcgagaag gtcggtacga
     8161 gctctacaag accacccaca agcacgacgg tacccaggaa caccctgaat ggttgagcgg
     8221 ggtatcctga caatttgagg ccgggacgcc ctctccatcg atcgcctcct ggtccccatc
     8281 cctaaccgtc ctgctaccgg cccccccggt ccccaccgac gtcgacagca accggtgtct
     8341 tgcaccagcg tgctgtcatc gatgcgtcac ccagattgtc tgaccaagac tggacgtggc
     8401 ccggcgcggc tgcgatcctt aagatgggtc tgaatacccc atcctggtga tagatcctcc
     8461 aatgaggcag acgaagtccc atcggttcct gaggtccgtc gcgcagtcgc tgcttggcag
     8521 catcggcgtg gtgctagtga cttacctcgg ttatcggtct catctcgatc tccccacgac
     8581 ggcctttctc tgcctgatcg tggtagtgct cgtttcgctg ggtggacgct tcgttccggc
     8641 cgcggttacc tctatcgtgg ccgttctgtc cgtcaactac ttctttgttc caccgctttt
     8701 caccattggg gtagcccagc ccttcgacga gatagcagtg actgccttcc tggcaaccgc
     8761 attggttatc agccgtctgg tggccaggct acgtcagtcg ttcagcgagg tgcaggccct
     8821 gaacgaacga ctgcaattcg tggtcgacac cattccaacg ctggtctcgc gttcccgacc
     8881 cgatggctcc ctcgatttca tcaatcaacg ctggcgggac tatctgggcc tctcgttaga
     8941 ggaagtgaag gactggggct ggaccgccgg ccttcatccg gaagataggg aacggttcgt
     9001 ggaccagtgg cgcgcggctc tgtcgagtgg gcggccgctg gagacggaag cccgcatgcg
     9061 gcgggctgac ggggagttcc gctggctctg gattcacgtg gtgccgttgc gtgaccccag
     9121 gggcgagatc gtcagctggt atggaacgag caccgatatc gaggaaagga agcgagccga
     9181 gggacgggcc cggcaggccg accgggaacg tcacatcgcc atcgacacga ttcccgcgct
     9241 gctctggagc acactgcccg atggttctag tgatttcaac aatcaaccgt ggctagagta
     9301 caccggtctg tcgtccgagg aagcacggga ctggggctat aagtccgtca ttcatccaga
     9361 ggactatcag cgtctggtga ctgaatgggc cgcgcacttc tcgaccggag agcctatcga
     9421 agacgaggcc cgcctgcggc gagccgacgg ggagtatcgc tggtttctgc accgcgccgt
     9481 gccgctgcgt gatgaacagg gaaacattgt gaagtggtac ggcaccagca ccgacatcga
     9541 ggacctgaag cgcgcggaaa ccgtgctgcg cgatcacgcc cggctgcttg acctcaccca
     9601 cgacacggtg ttcgttcgca atatgagcga tgccatcacc tattggaatc gtggtgccga
     9661 ggcgctctac ggctggagca gagacgaagc cgtgggcaag atctctcacc agctgacgca
     9721 gacgatcctt ccggcacccc tcgaggagat caacgaggag ctgctccg
//
LOCUS       DASYRV010000095         4912 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_38125, whole genome shotgun sequence.
ACCESSION   DASYRV010000095 DASYRV010000000
VERSION     DASYRV010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4912)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4912)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4912
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38125"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(20..850)
                     /locus_tag="VGQ24_02355"
     CDS             complement(20..850)
                     /locus_tag="VGQ24_02355"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8453703.1"
                     /translation="MRRRGVPGPTAAVLLLMGIVAIFAGTLAPYSPIEVRMEAALRPP
                     WFVQGGDWTYPLGTDHLGRDLLSRMIWGARISLGIAGLAIGLAATLGTMLGLVAGYSR
                     GWTSALIMRIVDVMLTFPAILLALLFTVTIGPSVWSVVAILVLVLWARFARLVRGEVL
                     GLRERDFVKYAQILGLSPVQIAWRHLGPNLINTVVVLATLQLGFAIIVEASLGFLGAG
                     VPPPTPTWGAMVAGGRTYLETAWWIAVFPALAIVLAVLTFNLFGDWVRDALDPRLRQF
                     "
     gene            complement(936..1175)
                     /locus_tag="VGQ24_02360"
     CDS             complement(936..1175)
                     /locus_tag="VGQ24_02360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453704.1"
                     /translation="MATEFYWVLAKKLRAFERAQVRMTEDEVAVELPRRAHTPIAHGI
                     RPARGPRPSPLVEWPTTAVRATLTFIPNPLVLWVA"
     gene            complement(1258..2172)
                     /locus_tag="VGQ24_02365"
     CDS             complement(1258..2172)
                     /locus_tag="VGQ24_02365"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8453705.1"
                     /translation="MLRFVGTRTTQALATLWILSIVVFLLARITGSPLDLLRPDAATA
                     ENREALLHELGLDRPLPVQYWQFLTNLLKGDLGRSFVLKTDIGPLLVSRFWSTFWLAT
                     VAMGVALAIAVPLGLLAAANRGGIWDTLATLLALGGMATPTFVSGIAGILIFGVWLGW
                     LPSFGVGTWKHFVLPAITLGWFNSAGILRLLRSSMLDVLDQEYIKFARLTGVPDRVVI
                     WKHALRNALLPVLTFVGFSYGILIAGAIATETVFAWPGMGRLAYDSILNRDFPVLQAI
                     TLVWSAIIIAINFMVDILYGVLDPRIRD"
     gene            complement(2270..3862)
                     /locus_tag="VGQ24_02370"
     CDS             complement(2270..3862)
                     /locus_tag="VGQ24_02370"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEV8453706.1"
                     /translation="MKRVVFGVIAVLVFATDYTEAVAAEPRGIVRVAVTAWGGQQFDA
                     AADLGEPLPYVNPMFDGIIGANPDGTVSKTTGAVMDWQVARGGIELVLQMRPGMKFHD
                     ETEATAEDLAFSLQRYAAPDSNSTSRGALRNVKEITVVSRYMVRVILNRPDAAFIPGV
                     ALVEGDALLVKKNAYRQTEKGWALTNPDKPVGTGPYKLARRKIGEFVEYEAFDQYWNP
                     QRKAGFKVVHITLVAEPSTRLSALRTGDLDLAPLNPEQVAPAKNARLQVLGPQNAVVP
                     MLAFFGSDTPDFLSHKLEFRKAMILGYDKRAIVKRLYTPEIATMATGTALFSPLSLGW
                     DASLEAYRYSPDEAKRLLKAAGYDNGIVKVWAYPFATVPEIPTLLEAISGYWQGLGVK
                     IEYTPVDWPTFSRRLFSKPQQWDKRYAAHVAILTPVTRPWVLNNMNVFMLGQESGGMA
                     AAYWNPEKIARLRGQLAQTTTVKQLDEELREVNRDLYQEYWADPVVFRHLPFGATSRI
                     CGWSPINGTGRQLELSTLRPCP"
     gene            complement(3921..>4912)
                     /locus_tag="VGQ24_02375"
     CDS             complement(3921..>4912)
                     /locus_tag="VGQ24_02375"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEV8453707.1"
                     /translation="TLPLDKTLRPPPASRVLRAAAHLLLDLRAGTTTARVLGEHDDLD
                     FAVKNAVDEGVIPGPRILPGGKAARPTFGHGHMGTPVNGADNVRTLVRENLLRGATQI
                     KLFVGGGVSETNSDLLGCYYTPQEIVAGVDEARRAGRPVAAHLKGGPGVRLCVEAGVD
                     SIEHGYLLTDDDMALMQAHGTWLGATPLNLLHPRGMSPATLEDPTIAAKYRTARESLR
                     TVYRKAVQNGLRWVTSSDARHGYLPHGVLLMVELGATPMDAILSVTRWPAELARVADT
                     AGTLEPSKYADIISVRGNPLEDPSAMTRVHLVMKGGRRYDTEDLFGWVSSSYQ"
BASE COUNT          885 a         1662 c         1586 g          779 t
ORIGIN      
        1 ggggccgtcg cgggggggtt caaaactgcc ggagccgcgg atcgagggca tcacggaccc
       61 aatcgccgaa aagattgaac gtcagcacgg cgagcacgat ggccagggct gggaagaccg
      121 caatccacca agcggtttcc aggtaggtcc ttcccccagc gaccatagcc ccccatgtcg
      181 gcgtcggcgg gggcacgccc gcacccagga accccagcga ggcctcgacg atgatcgcaa
      241 atccgagctg gagagtcgcc aggacgacga cggtgttgat gaggttcggg ccgagatggc
      301 gccaggcaat ctgcacagga gagagaccaa gaatctgcgc gtacttgacg aagtcacgct
      361 ccctcaatcc cagcacctcg cctcggacca accgggcaaa ccgcgcccac agtaccaaca
      421 cgagaatggc caccaccgac caaacactgg gcccgatggt gaccgtgaat agcagggcca
      481 gcaggatggc cgggaatgtg agcatgacat cgacgatgcg catgatgagc gctgaggtcc
      541 acccccgact gtagcccgcc accaaaccga gcatggtgcc aagcgtggcc gccagcccga
      601 tcgccagccc ggcgatgccc agggagatcc gggcgcccca gatcatccgg ctgagcagat
      661 cgcggccgag gtggtcggtg ccgagcgggt aggtccaatc accgccctgc acgaaccacg
      721 gcggccgcag ggccgcttcc atgcggacct cgatcggcga gtacggggcg agggtaccgg
      781 caaaaatggc cacgattccc atgagcagga ggacggcagc cgtgggcccc gggaccccgc
      841 gccgcctcat ggtcgccgcg atgcccagcc gctgccgcgg cgcaggggcc agcggtgcgg
      901 catccaggcg ccagctcctc gcctggcctc gattgtcacg ccacccaaag gaccagcggg
      961 ttggggatga aggtcaacgt agctcgaacc gcagtcgtcg gccattccac caagggactg
     1021 gggcgcgggc cgcgagcagg ccggatgcca tgagcgatcg gggtgtgagc gcggcggggc
     1081 agttccaccg ccacctcgtc ctcggtcatg cgcacctggg ctcgctcgaa ggcccggagc
     1141 ttcttggcca acacccagta gaactcggtc gccatcgtgg gcagcaagac gccgaagctg
     1201 acgtgagcgc caccgccgag ctcagcgcac cggcatgtcc tcgcgtgaca atcgaggcta
     1261 atcccgaatg cggggatcga gcacaccata gaggatatcc accatgaagt tgatggcgat
     1321 gatgatggcc gaccacacca gggtgatcgc ctgcagaacc gggaagtccc gattcaggat
     1381 cgagtcatag gccagccgcc ccatgcccgg ccaggcaaac accgtctccg tggcaatggc
     1441 tccggcgatc aggatgccgt aggagaatcc gacgaacgtg agcacgggaa gcagggcgtt
     1501 gcggagagcg tgcttccaga tcaccacccg gtccgggacg cccgtcagcc ttgcgaactt
     1561 gatgtactcc tggtcgagga catcgagcat gctggatcgc agcagccgaa gaatccccgc
     1621 actgttgaac caccccaagg taatcgccgg gagcacgaaa tgcttccagg tgccgacgcc
     1681 gaaggagggc agccatccca accagacacc gaagatgagg atcccggcaa tgccagagac
     1741 aaaggtcggc gtggccatcc cgcccagggc gagcagggtg gccagcgtgt cccagattcc
     1801 accccggttc gcggccgcga gcaggcccag cggcaccgca atcgccagcg cgacccccat
     1861 cgcgaccgtg gcgagccaga aggtgctcca gaaccggctg accagtagcg gcccgatgtc
     1921 cgtcttcaac acgaaggacc ggcccaggtc ccccttgagc aggttcgtca ggaactgcca
     1981 gtactggacc gggagcggtc ggtccaagcc gagctcgtgg aggagagcct cgcggttctc
     2041 tgcggtggcc gcgtccggcc gtaacaggtc cagcggactc ccggtgatac gggcgagcag
     2101 gaagacgacg atgctgagga tccacagcgt cgccagggcc tgggtggtcc gggtgcccac
     2161 aaatctcagc atgggccgtg tcacgtccgc acagtcgcgg tccccgccgg ggtaggcgcc
     2221 gtgcggcggg gcggagcgct gctcccctcc ccgccgcagc gtcagccgac tacgggcacg
     2281 ggcgcaacgt ggagagctct agctgccgtc ccgtgccatt gatgggcgac cacccgcaga
     2341 tccgcgatgt cgcgccgaag gggaggtgcc ggaagacaac cgggtccgcc cagtattcct
     2401 ggtagaggtc gcggttgact tcccgcagct cctcatccag ttgtttgacg gtggtggtct
     2461 gggcgagctg cccgcggaga cgagcaatct tctcagggtt ccaataggcg gccgccatcc
     2521 ctccgctctc ctgcccgagc atgaagacgt tcatattgtt gaggacccag ggccgcgtga
     2581 cgggcgttaa gattgccacg tgcgctgcgt accgtttgtc ccactgctgc ggcttgctaa
     2641 acaaccgcct cgaaaaggtc ggccagtcca ccggggtgta ctcgatctta accccgagcc
     2701 cctgccagta cccgctgatg gcctccagga gcgtcgggat ttcgggcacc gtggcgaacg
     2761 ggtaggccca gaccttcaca atgccgttat cgtatccggc ggccttcagg agccgcttgg
     2821 cttcatcggg cgagtatcgg tacgcctcta gcgaggcgtc ccacccgaga ctcagcggac
     2881 tgaagagggc ggtgccggtg gccatcgtcg caatctcggg cgtatacagt cgcttcacga
     2941 tcgcccgctt gtcgtatccc aggatcatgg ccttccggaa ctccagcttg tggctgagaa
     3001 agtccggggt gtcgctccca aagaacgcca gcatgggaac cacggcgttc tggggcccca
     3061 agacctgcag gcgggcgttc ttcgccggtg ccacctgctc cggattgagc ggcgccaggt
     3121 ccaggtcccc cgtcctcagc gcgctgaggc gcgtgctggg ctcggccacc agggtgatgt
     3181 gcacaacctt gaagccggct ttccgctggg gattccagta ctggtcaaag gcttcgtact
     3241 ccacgaattc gccgatcttc cggcgcgcga gcttgtaggg cccggtgcct acgggcttgt
     3301 cgggattcgt caacgcccag cccttctcgg tttgccggta ggcgtttttt ttcaccagca
     3361 gggcatcacc ctcaacgagc gccacccccg ggatgaacgc tgcatcgggc cggttgagga
     3421 tgacccggac catgtatcgg ctgacgacgg tgatctcttt gacgttcctg agcgccccgc
     3481 gagaggtgga gttgctgtcc ggcgcggcgt agcgctggag cgagaaggcc aggtcctccg
     3541 cggtcgcctc ggtctcatcg tggaacttca tgcccggccg catctgcaac acgagctcga
     3601 tgcccccgcg ggccacctgc cagtccatga cggcgcccgt ggtcttgctg accgtgccat
     3661 cggggtttgc gccgatgatc ccatcgaaca tgggattcac atagggtagc ggttccccga
     3721 ggtcggccgc cgcgtcaaac tgctgccctc cccacgccgt cacggccacc cgcacgatgc
     3781 ctcggggctc ggcggccacc gcctcggtgt agtcggtggc gaagaccagc accgcgatca
     3841 cgccgaacac cacccgtttc atgctcttcc cctcctctcg gcgtaccgtg tgtacgatct
     3901 acgggcgggc attctcccgg ctattgatag gatgaggata cccacccgaa cagatcctcg
     3961 gtgtcatagc ggcggccccc tttcatcacc aggtggacgc gggtcatcgc agacggatcc
     4021 tccagggggt tcccccgcac cgagatgata tcggcgtact tgctgggctc gagcgtgccg
     4081 gccgtatccg ccaccctcgc cagctcagcc ggccatcggg tcacggacag gatcgcgtcc
     4141 atcggcgtgg cgcccagctc gaccatgagc agcacaccat ggggcagata gccatgccgc
     4201 gcgtcggacg aggtcaccca tcgcaggccg ttctgcacag ccttccggta gaccgtgcgc
     4261 agactctcgc gggccgtgcg gtactttgcc gcgatggtcg ggtcttccag cgtggccggg
     4321 gacatccccc ggggatgaag cagattgagc ggggtggcac ctagccaggt cccgtgagcc
     4381 tgcatcagcg ccatgtcatc atcggtcagc aggtacccgt gttcgatgga gtccactccc
     4441 gcctccacgc acaaccgcac cccagggccg cccttgaggt gggccgccac ggggcgccct
     4501 gcccggcgcg cctcgtccac gccagccacg atctcctgcg gggtgtagta acagcccaac
     4561 aggtccgagt tagtctcgct gacgccgccc cccacaaaca gcttgatctg agtggccccc
     4621 cgcaggaggt tttcgcggac cagcgtgcgg acattgtccg cgccgttgac gggcgtcccc
     4681 atgtggccgt gcccgaacgt cggcctggcc gccttgccgc ccggcaagat gcgcggcccg
     4741 gggatcactc cctcgtccac cgcatttttg accgcgaaat ccaagtcgtc atgttcgccc
     4801 aggactctgg ccgtggtggt tccggcgcga agatccagca gcaggtgcgc cgccgcccgc
     4861 agcactcgac tggcaggggg cggccgcagc gttttgtcta aaggaagcgt tc
//
LOCUS       DASYRV010000096         2803 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_643697, whole genome shotgun sequence.
ACCESSION   DASYRV010000096 DASYRV010000000
VERSION     DASYRV010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2803)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2803)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2803
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_643697"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            159..995
                     /locus_tag="VGQ24_02380"
     CDS             159..995
                     /locus_tag="VGQ24_02380"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEV8453708.1"
                     /translation="MTVRTAALVLSGGGAKTAAHLGACRALREAGFEPIWYVGTSMGA
                     VIAAGLASGVANDELLERMADVGARGIVRDPLAPVAGLYLRSLLKPGPLRSAIEALVP
                     VRRFADLTVPLTVTAVDLDTGELVLFGAGAQTAPLVDVLCASCALPMYYPPVVINGRR
                     FGDGGLRCVVPLEPAAELDVDLVLAVDVGPGFDPPGPAEAARVPAMVRAHDDALGILM
                     AANSESQLALWRADPSRPPLVYVRPRTERNATFRVDRVREYANEGRRAAREALDRWGR
                     DS"
     gene            1028..1435
                     /locus_tag="VGQ24_02385"
     CDS             1028..1435
                     /locus_tag="VGQ24_02385"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEV8453709.1"
                     /translation="MKASEVMVPDPHVAVAGAMASEVAIMLKTRNISVVPVVDDHRTR
                     RFLGTLSDRDLVTRCLAEGKHPWHTRVDSLMRTNSPVVRPDRELEGFEVRMDMDPSES
                     HLRPTITVVDEQGKVVGFISHPEQIPEVRIVWG"
     gene            1469..1891
                     /locus_tag="VGQ24_02390"
     CDS             1469..1891
                     /locus_tag="VGQ24_02390"
                     /inference="COORDINATES: protein motif:HMM:NF021486.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2203 domain-containing protein"
                     /protein_id="HEV8453710.1"
                     /translation="MPDFKLFTLQEAERTLPLVRRIVSDLTIEYPAWRAAVGRFELLT
                     GGARADWGETQELIAAREEVTRHADRINRYLQELEGIGCVFKGFEGGLVDFYSMREDR
                     PIFLCWRLGEDRITHWHEIDTGFGGRQPIDGAILSAVM"
     gene            1888..2340
                     /locus_tag="VGQ24_02395"
     CDS             1888..2340
                     /locus_tag="VGQ24_02395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453711.1"
                     /translation="MTRFWLFLHLLGFTLWLGGAIAAMVMGVAAKREDRHGLGAVVRA
                     QASLMKVAIAPGAILAVLSGLILTFQLTGGDLPGFSIWLVTMQGAGIVAALLTLLISL
                     PTAAKLSRLDPLGETAGYFDELRQRQRIVGSISGTFGLVALFAGAMLR"
BASE COUNT          458 a          866 c          951 g          528 t
ORIGIN      
        1 ggggagaagc ggcacaccca taccgctcac gttgtcttcg tggcagtgga cgatgagggc
       61 aagccgaaac gggttccccg tctcctgccg gagaccgatg aggagcgggc gcgctacgct
      121 cgagccgaga tccaccgtag acgcaagccc aagcccacgt gacggttcgt accgcggcgc
      181 tggtcttgag cggcggtggc gcaaagaccg cggcgcacct gggcgcgtgc cgcgcgctgc
      241 gcgaggcggg cttcgagccg atctggtatg tcggcacctc gatgggtgcg gtgatcgctg
      301 ccgggctcgc cagcggggtg gcgaacgacg agctgctgga gcgtatggcc gacgtgggag
      361 ctcgcggcat cgtgcgagac ccactggcgc cggttgctgg tctctatctc cgttccctcc
      421 tcaagccagg tccacttcgg tccgccatcg aagcgctggt gccggtccgg cgattcgccg
      481 atctgacagt tccgctcact gtcaccgccg tggatctcga taccggcgag ctggtgctct
      541 tcggtgccgg cgcgcaaacg gctccgctgg tggatgtgct ctgcgccagc tgcgcgttgc
      601 cgatgtacta cccgcccgtg gtgatcaatg gccgccggtt cggtgatggc gggctgcgct
      661 gtgtcgtgcc gctcgagccg gccgcggagc tggatgtcga cctggtgctc gcggtggatg
      721 tggggcctgg cttcgacccg ccgggtccgg ccgaggccgc ccgggtgccc gcaatggtgc
      781 gggcccacga tgatgcgctc gggatcctga tggccgccaa ttcggaaagc cagctggcgc
      841 tctggcgcgc cgatcccagc aggccaccgc tggtttatgt gcgcccccgg actgagcgga
      901 atgccacctt cagagtggat cgagtgcggg agtacgcaaa cgagggacgc cgggccgccc
      961 gtgaagcatt ggaccgctgg ggaagagact cttgacccct cccccattcg gggcaaattg
     1021 agccaccatg aaagcctctg aagtgatggt gcccgacccc catgtggcgg tggcgggcgc
     1081 gatggcgagc gaggtcgcaa tcatgctgaa gacgcgcaac atttcggtgg tgccggtggt
     1141 ggacgatcac cgtacccgcc gattcctcgg cacgctcagc gaccgcgacc tggtaacccg
     1201 ctgcctggcc gaagggaagc acccgtggca tactcgggtc gattcgctca tgcgcaccaa
     1261 ctcgccagtc gtgcggccgg accgtgagct cgagggcttc gaagtgcgga tggacatgga
     1321 tccgagcgag tcgcacctga ggccgacgat tacggtggtg gacgagcagg gaaaggtggt
     1381 gggattcatc agtcacccgg agcagattcc ggaagtgagg atcgtttggg gatgacaaga
     1441 cggcctcgag atcgtaggcg agtcgatgat gcctgacttc aaactgttca cccttcagga
     1501 agccgagcgc acgctgccgc tggtgcggcg gatcgtgtcg gatctgacta tcgagtatcc
     1561 agcctggcga gccgcggtcg ggcgcttcga gctcctgacc ggcggggcca gggccgactg
     1621 gggtgagacc caggagctga ttgccgcccg ggaggaagtc acccgtcacg ccgatcggat
     1681 caaccgctac ctccaggagc tggagggaat tggctgcgtc ttcaagggat tcgagggcgg
     1741 gttggtagac ttctactcga tgcgggagga tcgtccgatc ttcctctgct ggcgactggg
     1801 cgaggaccgg atcacccact ggcacgagat cgacaccggc ttcggcggcc ggcagccgat
     1861 cgacggagct atcctgtcgg ccgtgatgtg actcggttct ggctgttcct ccacctgctc
     1921 gggttcaccc tgtggctcgg cggggcaatc gccgcgatgg tcatgggagt cgccgcgaag
     1981 cgggaagacc ggcacggatt gggcgcggtg gtgcgagcgc aggcgtcgct catgaaggtg
     2041 gcgatcgcac ccggcgcgat cctggcagtg ctgtcgggtc tgattctgac gttccagctc
     2101 actggtggtg atctccccgg cttcagcatc tggctggtca ccatgcaggg cgctggcatc
     2161 gtggcagccc tgctgaccct tctgatctcg cttcccaccg ccgccaagct gagccggctc
     2221 gatcccctgg gtgagaccgc cggctacttc gatgagctac gccagcggca gcggatcgtg
     2281 ggttcgatct ccgggacgtt cgggctggtg gcgctgttcg cgggtgcgat gctgagataa
     2341 agcgtgaacg gtaaacggtg aacggtgaac gggagcaaca acggaactct ctgcgctgtt
     2401 tgagcatccc caggagtagt cgctctgtcc tccgagttcg cctcaacaat cccctaagcg
     2461 gttcctcgtc aataacttca gcctcgattg ccagctgcag cagctcacca gtttccaccg
     2521 cggacccata ggcaatgccc aggtgccttg tgaatgtggg tgagtctcca aacgtgtatc
     2581 cctccgcaat gttgagttgg acgctcagcg aagcccgctg cccgttcacc gtttaccgtt
     2641 caccgttcac gcagttaggt cagtgcacca gtttcttgta acgaatccga tgcggctggt
     2701 tggcgtccac gcccttccgt cgcttgaggt ccgccgcgta atcctgatag ttcccctcga
     2761 accacacgac ttcgctgttg ccctcgaacg caaggatatg ggt
//
LOCUS       DASYRV010000097         8542 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1283611, whole genome shotgun sequence.
ACCESSION   DASYRV010000097 DASYRV010000000
VERSION     DASYRV010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8542
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1283611"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..450)
                     /locus_tag="VGQ24_02400"
     CDS             complement(<1..450)
                     /locus_tag="VGQ24_02400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453712.1"
                     /translation="MRASSLSLLLALTSASAWSAAAQDPPPRAPGAPAAVARRLFDST
                     TTIPYFPLGESPLALRGPARAGVFLSAVGRRAIAMGSEDGRLELWSWPLKWLHDFELW
                     FRVPKYSEPIAGRSIVQSVTERPEGVTIQYAYEQFTVREHIFVPLDKP"
     gene            complement(478..1770)
                     /locus_tag="VGQ24_02405"
     CDS             complement(478..1770)
                     /locus_tag="VGQ24_02405"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEV8453713.1"
                     /translation="MAAPDPVPLPDHPSLEWLRKQAKRRLEELRQAHPDAQLADAQFE
                     LAKHYGFSSWRALKAHVDSLSLAGRLFEAARQGEVDKLSELLGEHPELLHARNQPYAH
                     TLLHVAAFGGHLKAVDLLLERGLDVNSREKGDNTYAMHWAAAAGHLDVVRRLADAGGD
                     VVGQGDDHELEVIGWATCWNGCDDAAHRAVADLLISRGARHHIFSAIALNLGDEVRRI
                     VAAGRGALSRRMSRNEDHQSPLHFAVRMNRPDMVALLLTLGADPLTVDQSGYTAAAYA
                     TSPAVDRPVMEAIRAMTSAELQSAERGQRQPDTRALDLAAVLALGDWETAERLLAGGA
                     SEGVLHLMAKRNDAPAVRWLLAHGADPNARWAHWDALVTPLHLAILGGHPHIVRLLLE
                     AGADPRIRDSKHDSDAMGWAEFFRRAGIVQILSDAAKA"
     gene            2494..2940
                     /locus_tag="VGQ24_02410"
     CDS             2494..2940
                     /locus_tag="VGQ24_02410"
                     /inference="COORDINATES: protein motif:HMM:NF019238.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1569 domain-containing protein"
                     /protein_id="HEV8453714.1"
                     /translation="MKTLLDPACRERLLARLRGLHPETAPRWGRMSAPQMLAHLCDQL
                     RYTLGEYRVTLHRGVLRWPVAKQALMYWLPWPKARIKGSPEMFLTPPTAWSADVVTFQ
                     ALLDRFVAETAATGWPDHPFFGSMTRESWARFSYRHFDHHLRQFGA"
     gene            2957..4840
                     /locus_tag="VGQ24_02415"
     CDS             2957..4840
                     /locus_tag="VGQ24_02415"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEV8453715.1"
                     /translation="MTPADEIQLPDRFRIEQEIGRGGMAVVYRAHDRHLDRFVAIKVL
                     SSNLSHAMGVERFQRELALMAKLVHPGIVALFDSGEVNGRLYYVMPFVAGENLRARLL
                     RERRMTLEDATAFGADVAEALAYAHGAGIVHRDVKPENIFTVGGRAVLADFGIAHIAG
                     EQTGGAHLTSAGMVLGTMAYMSPEQANGESLLDGRSDLYSLGCVLYELLTGTPPFTAG
                     TPLGVLTKHISEPPRPPSEHNGGLSHAVDDLILSLLAKDPDQRPATAGDVARALRAAG
                     QTAPAPASPGEPSDADRLVSEGLDAIYRSSAAGPASRSHLDQAGVYINRALTLDPGNA
                     RGLCALANWYYTMGRHGFLPPAEAFAKGRELLLDALAADDRVAEVHNSLGKIALYYDD
                     DCHAAARHIERAVALAPGDAEGLRFQSVVYKILGRTDAAIQSARAACARAPEMPSVWN
                     GLGDVLLAAGRNAEAIDALKRAIALQPGYGPALERLELAHVRLGELDLALEIRASRLR
                     LAGQSDRAEQLLNEAKLSRPVEAIRRDLGRELEELLRKAEQTDPFGEYYLSRTLADQI
                     VVTYAALGEWHKAMDWVERAYARRPVRLRRMLTEPPFDRRGLAVDPRYARLLRVAVME
                     DLL"
     gene            5056..5688
                     /locus_tag="VGQ24_02420"
     CDS             5056..5688
                     /locus_tag="VGQ24_02420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453716.1"
                     /translation="MPEPPPFAGDGVEADPYFTPDGRSLYFISTRSVAGIERRSLDIW
                     RVERDTAGSWGSPSRLPEPVNSPGAEWFPRPGADGWLYFGSNRPGGLGATDIWRAHPD
                     SAGGWTVENLGPTVNTAGEEYEPLPAPDGSRMIMMADGGLFETRRTAAGWAPRTKLGP
                     EINQNGSEIGPLFSPTGHSLLFARDTKGPDSGEFFVWYERGREAWPPECH"
     gene            5685..6572
                     /locus_tag="VGQ24_02425"
     CDS             5685..6572
                     /locus_tag="VGQ24_02425"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEV8453717.1"
                     /translation="MSSRIAAAGALAAFVACTPVPATTPQPVEARAATLAAGADQYFE
                     RNEVRLRYRDVGQGGPVVLLHGYTQRIELMATLADSLSGAYRVIVLDERGFGKSTKSS
                     DPRWYGRPMVEDVIGLLDRLSIRRAHVIGHSMGALLAANLALRYPDRVASVSLLAGPF
                     FSDSVAFAAMSTPYVQALERGQGLTAFFSWLFPSIPDSIVAGASTQLLAENDLGSLIG
                     VLRAMGGLMVSAERAHSARVPALVAVGTADPLLPQSRAVAALWPGARLLVVPDAHHAA
                     VLAHGAVVAAIREVLPTPH"
     gene            complement(6591..7055)
                     /locus_tag="VGQ24_02430"
     CDS             complement(6591..7055)
                     /locus_tag="VGQ24_02430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453718.1"
                     /translation="MTTPRDGPTQAVLDQLLREHGLSGETRLYREAERGSLIPLDTSG
                     AYRVRANANPSESVVDVYGQGHLVQAEQVGAGLAFADSAAPNWQETMELRALREGRGK
                     PGAPPEDRVEIEVRLQDILHQGGLLYPVESVTVERVWYCTLPAGSVEVREVK"
     gene            7308..7757
                     /locus_tag="VGQ24_02435"
     CDS             7308..7757
                     /locus_tag="VGQ24_02435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453719.1"
                     /translation="MPLAARASYRRWISYAACLWAACFAVPHIWWALGIPAGFPGGAA
                     GHQLMMSSAWRYIYDLIVIILSFLAVLITLALLRPPHLVIRRWVPHTAAWIASGMLAL
                     RGVAGMIVDGTSDPIWWHLSAGRYSPRRSRVDGAVSAFVIRRVNSGL"
     gene            complement(7849..>8542)
                     /locus_tag="VGQ24_02440"
     CDS             complement(7849..>8542)
                     /locus_tag="VGQ24_02440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453720.1"
                     /translation="PLTPNQPYAPQIVPANFVPGTANPYFPLAPSTYWYRTEDGSELN
                     QVMVTSGTKTILGVVTIVVHDRVYVDENENGVADGTSCGADPGFTSELIEETFDWYAP
                     DNTGAVWYFGEDSKEYDHCTLVGTAGSWEAGLSGAQPGIIMLANPVIGQMYRQEFLAD
                     IAEDWAKVVSLTQAVSVPFGDFEGCVETMEWTPLEPGHRADKYYCGGVGLVLEVTPSV
                     GRERNELISRTP"
BASE COUNT         1309 a         2909 c         2775 g         1549 t
ORIGIN      
        1 gggtttgtcg agcggcacga agatgtgctc gcgcactgtg aactgctcgt acgcgtactg
       61 gatggtgacg ccctcggggc gctcggtcac cgattggacg atgctgcgcc cggcgatcgg
      121 ctcgctgtat ttgggaaccc ggaaccacag ctcgaaatcg tgcagccatt tgaggggcca
      181 tgaccagagc tcgagccggc catcctcgct gcccatcgcg atggcgcgcc gcccgaccgc
      241 cgacaggaac accccggccc gcgcggggcc gcgcagtgcg agcggcgatt cgccgagcgg
      301 aaagtacggg atcgtcgtcg tggagtcgaa cagccggcgc gcgacggccg ccggtgctcc
      361 cggagcgcgc ggcggcgggt cctgcgcagc cgccgaccat gccgatgcgg aggtaagcgc
      421 gaggaggaga ctgagcgacg aagccctcat ctggagtaag ctaacgctcc gcagcgctca
      481 cgccttcgcc gcatccgaga ggatctgcac gatgcccgcc cgtcggaaga attcagccca
      541 gcccatcgcg tcgctgtcgt gtttgctgtc gcggatgcgt ggatcggcgc cggcctccag
      601 caagagccgc acgatgtgcg gatgaccgcc caggatggcg aggtgcagcg gcgtcaccag
      661 agcgtcccag tgcgcccagc gtgcattggg gtccgcgccg tgcgccagca gccaccggac
      721 cgccggggcg tcatttcgtt tggccataag atgcagcacg ccctcactcg cgccgccggc
      781 gaggagccgt tccgccgtct cccagtctcc cagtgccagc accgcggcga gatccagcgc
      841 gcgggtgtcc ggctgacgct gtccccgctc cgcgctctgt agctccgccg aggtcatcgc
      901 tcggattgcc tccatcacgg ggcggtccac cgcgggcgac gtcgcataag ccgccgccgt
      961 gtagccggac tgatccaccg tcagtggatc ggcccccagc gtaagcagca acgccaccat
     1021 gtccgggcga ttcatccgca ccgcgaagtg caagggcgat tggtggtcct cgttgcgact
     1081 catccgccgg ctcagcgctc cccggccggc ggcgacgatc cggcggactt cgtcgccgag
     1141 gttgagcgca atcgcggaga agatgtggtg ccgcgcgccg cggctgatca gcaagtccgc
     1201 gacggcgcgg tgggcggcgt catcgcatcc gttccagcag gttgcccacc cgatcacttc
     1261 cagctcgtgg tcgtcaccct gccccacgac gtcacccccc gcgtcggcca gtcgccgcac
     1321 gacgtccagg tggccagccg ccgccgccca atgcatcgcg taggtgttgt cgcccttctc
     1381 ccgggagttc acgtcgagcc cgcgttccag caacaggtcc accgccttca ggtgtccgcc
     1441 gaacgccgcc acgtgcagca gcgtgtgtgc gtagggttgg ttgcgagcgt gcagcagttc
     1501 cgggtgttcg ccgagcagtt cggacagctt gtcgacctcg ccctgccgtg ccgcctcgaa
     1561 cagccggcct gctaggctca gcgaatcgac gtgcgccttg agcgcacgcc agctcgagaa
     1621 gccatagtgt ttggcgagct cgaattgcgc gtcggccagt tgggcgtcgg ggtgagcttg
     1681 cctgagctcc tccaggcggc gcttggcctg tttgcgaagc cactcgaggc tggggtggtc
     1741 cggaagcggc accggatctg gtgcagccat agataccttc cttccttaga aagggcagca
     1801 gccccttcat gccgcccgtt gtccgcagtg tggggcgagg aaaagaaggt catgtgacag
     1861 cggtgagagg gcgggttgaa ccctttacgc ggaccgtcgg ccgccctcgc ggcactcggt
     1921 gaatgctacc gtgcgagtgc acaggcgaca agagaggtat cttgcaagtg agtgcatcac
     1981 cctgcgtcgt gaaggtcgtt atgccccagc gctcctggaa gcacctgcct ctgactctgc
     2041 tggctgcggt cgcatgctca gcgaccctgg agccacagaa ctctgtgtcg ttgctggtcc
     2101 tcaatggaac ctgtgtggcc ggtcaatgca gtccacttcg cattctcggc ttcccgagca
     2161 atcagcctca cacgcctggt gggttttggt cggtcgatct gggaatcctc gccaccgctt
     2221 cggcgtgcct gagtgtgcct gcttctctcg aattccgcgt caccgaggcc tccaccggcg
     2281 cgacgacgac ttaccggtgg tctcccgttc gcggtttttc tctcggagca cagccgtctt
     2341 cggagtcgac cctcatggcg gagccgagca ccggcgagtt cgttccggcg accgcgccgg
     2401 catggcgcgt taccttgccg ggagccggcc ctgcccttcc cgcggcagcg tgcactcctt
     2461 gagggccact tcccgctgag agcgcttgcc gctgtgaaga ctctgctcga ccccgcctgt
     2521 cgcgagcgct tgctggcccg cttgcggggg ctccatcccg agaccgcgcc gcgctggggc
     2581 cgaatgagcg caccgcagat gctggcccat ctctgcgacc agttgcggta cactctcgga
     2641 gagtatcggg tcaccctgca tcgcggcgtg ctgcgctggc ccgtcgccaa acaggcgctc
     2701 atgtattggc tgccctggcc caaggcccgg attaagggat ctcccgagat gttcctcacg
     2761 cctccgacgg cctggagcgc cgatgtggtg acttttcaag cgctgctcga ccgcttcgtc
     2821 gcggagaccg ctgcaaccgg ctggccggat catcccttct tcggctctat gacccgcgag
     2881 tcgtgggctc ggttctccta ccgtcacttc gatcaccatt tgcgccagtt tggggcctga
     2941 ttaacctacc ggtcccatga caccggcaga cgagatccag ctccccgacc ggttccgcat
     3001 cgagcaagaa atcgggcgcg gcgggatggc ggtggtctat cgcgcgcatg accggcacct
     3061 cgaccgcttt gtcgcgatca aagtgctgtc ctccaacctg tcgcacgcga tgggcgtcga
     3121 gcgtttccag cgtgagctcg cgctgatggc caagctggtc caccccggca tcgtggccct
     3181 cttcgattcc ggcgaggtga acggccgact gtattacgtg atgcccttcg tggccggcga
     3241 aaacctccgc gcccggctgc tgcgcgagcg gcgcatgacc ctcgaggatg cgacggcgtt
     3301 cggggccgac gtcgccgagg cgctggccta tgcccacggc gccggcatcg tccaccgcga
     3361 cgtcaagccc gagaacatct tcaccgtcgg cggccgcgcc gtcctcgccg acttcgggat
     3421 cgcccacatc gccggggagc agaccggcgg cgcgcacctg acctcggcgg ggatggtgct
     3481 gggcaccatg gcgtacatga gccccgagca agccaacgga gaatcccttc tcgacggccg
     3541 ttccgatctc tacagcctgg gctgcgtgct ctatgagctg ctgaccggaa ccccgccatt
     3601 cacggcgggg actccgctcg gcgtgctcac caagcatatc tcggagccgc cccggccccc
     3661 aagcgaacac aacggcgggc tctcgcacgc ggtcgacgat ctcatcctga gcctgctggc
     3721 caaggacccg gatcagcgcc cggcaaccgc aggcgatgtc gcccgagccc tccgtgccgc
     3781 gggacagact gctcccgcgc ccgcctcacc gggggaaccc agcgacgccg atcgcctggt
     3841 aagcgaaggc ctcgacgcca tctaccgaag ctcggccgcg ggcccggcgt cgcgctcaca
     3901 tctcgatcaa gccggcgtgt acatcaaccg ggccctcacc ctcgatccgg ggaatgcccg
     3961 gggactctgc gccttagcca attggtatta cacgatgggc cggcacggat tcctcccgcc
     4021 cgcggaggcc tttgcgaagg gacgcgagct cctcctcgat gccctcgcgg ccgacgatcg
     4081 ggtcgccgaa gtgcacaatt ctctggggaa gatcgcgctg tactacgatg atgattgtca
     4141 tgccgccgcg cgtcacatcg agcgcgccgt ggcactcgct ccaggcgatg cggaagggct
     4201 tcgcttccag agcgtcgtct acaagattct gggccgcacc gacgcagcca tccagagcgc
     4261 gcgggcggcg tgcgcccggg cgccggaaat gccttcggtt tggaatgggc tgggcgacgt
     4321 gctcctcgcg gcggggcgta acgcggaggc gatcgacgcg ctcaagcggg cgatcgcgtt
     4381 gcaacctggt tacggtcccg cgctggagcg gctggagctc gcccacgttc ggctgggtga
     4441 gctcgacttg gcgctcgaga ttcgcgcctc ccggctccgg ctcgccggtc aatccgaccg
     4501 cgccgaacag ctgttgaacg aggctaagct gagccgcccg gtcgaggcga ttcgccggga
     4561 cctcgggcgc gagctcgagg agctgctgcg caaggccgag cagaccgatc ccttcgggga
     4621 gtattatttg agccgcaccc tcgcggacca gatcgtggtc acctacgcgg cgctcggtga
     4681 atggcacaag gcgatggact gggtggagcg ggcctacgcg cggcggccgg tgcggctgcg
     4741 ccgcatgctc accgagcctc ccttcgaccg ccgcgggtta gccgtggatc cccgctatgc
     4801 caggctgctg cgggtagccg tgatggagga tctgctgtag ggtatgctgc gctactggct
     4861 agcagtttcc gccctcttcg cggcagtcac tgccgctgag gttgagccgt ggaagccagt
     4921 cggcatctcc agcccacagt tcgaatcgca ccccgccttc gatccccgca ccggcgactt
     4981 ctatttcgtg cggagctcac cccgcttcac cgggtggcgc atcctgtcag tcgctgtacg
     5041 agagggcagt ggtccatgcc ggagcctccg cccttcgccg gcgatggcgt ggaggcggat
     5101 ccgtacttta ccccggacgg ccgcagcctg tacttcatct ccacccgctc cgtggccgga
     5161 atcgagcgtc gcagcctgga tatctggcgg gtcgagcgcg ataccgcggg ctcctggggg
     5221 tccccaagtc gcctcccgga gccggtgaac tctcccgggg ccgagtggtt tccccggccc
     5281 ggcgcggacg gctggctgta cttcggatcg aaccggcccg gtggccttgg agcgaccgat
     5341 atctggcggg cgcaccccga ttcggccggc gggtggaccg tggagaatct cggcccgaca
     5401 gtgaacaccg ccggcgagga gtacgagccg ctgcctgctc cggatggctc ccggatgatc
     5461 atgatggccg acgggggtct cttcgaaacg cgccggaccg ctgcagggtg ggcaccgcgt
     5521 acgaagctcg gccccgagat aaaccagaat ggctcggaga ttggcccgct attctcccct
     5581 accggccatt cgctcctgtt cgcccgggat accaagggtc cggactccgg cgagtttttc
     5641 gtctggtatg agcgcggccg cgaggcctgg cctccggaat gtcattgagc tctcgtatcg
     5701 ctgcagccgg tgccctcgcg gcattcgtgg catgtacacc ggtcccggct acaaccccgc
     5761 aacccgtcga agcccgcgcg gctacgctgg ctgccggggc cgatcagtac ttcgagcgca
     5821 acgaggtccg gctccgctat cgcgatgtcg gccaaggcgg gcctgtcgtc ttgctccatg
     5881 gctataccca gcgaatcgag ctgatggcca ccctggccga ttcgctctcc ggcgcgtatc
     5941 gggtcatcgt cctcgacgag cggggtttcg gcaagagcac caaatcatcc gacccgcgct
     6001 ggtacggccg gccgatggtg gaagacgtga tcggtctcct cgaccgcttg agcattcgcc
     6061 gggcgcatgt gatcgggcac tcgatgggag ctttgctggc ggccaatctc gcgttgcgtt
     6121 atcccgatcg cgtcgcctcg gtatccctgc tggcgggtcc cttcttctcg gactcggtcg
     6181 cgttcgccgc gatgagtacg ccgtacgttc aggctttgga gagaggccag gggctcacgg
     6241 cgttcttcag ctggctcttt cccagcatcc cggattccat cgtagccggc gccagtaccc
     6301 agctgctcgc ggagaacgac ctcggttcgc tgatcggcgt gctgcgtgcc atgggaggct
     6361 tgatggtcag tgcggagcgg gctcacagtg ctcgcgtgcc cgcactagtt gccgtgggga
     6421 ccgccgatcc cctgctcccg cagtcccggg ctgtcgccgc actctggcca ggggcacgcc
     6481 tgctggtggt acccgacgcg caccacgctg cggtcctggc tcatggggcg gtcgtggcgg
     6541 cgattcgaga ggtgttaccg acgccgcact gattcggcgc cacatcctcg ctacttcact
     6601 tcgcgcacct caaccgagcc tgccggaagg gtgcagtacc agactcgctc gaccgtgacg
     6661 gattccaccg ggtaaagcag tccgccctgg tgcagtatgt cctggagccg gacttctatc
     6721 tcgacgcgat cctccggtgg tgcaccaggc ttacctcgcc cctccctgag ggcgcggagc
     6781 tccatcgtct cctgccagtt gggcgcggcg gagtcggcaa aggcgagtcc cgcgccgact
     6841 tgctctgcct gaacgaggtg accctggccg tacacatcga cgacggactc gctcgggttc
     6901 gcgttcgcgc gaactcggta ggcacccgac gtgtccagtg gtatcagcga gccgcgctcg
     6961 gcttcgcggt acaaccgcgt ctcgccggat agcccgtgct cgcggagcag ttggtcgagg
     7021 acagcctggg ttggcccgtc gcgcggagtc gtcatggcgg agctcgcggg agaagtcgcg
     7081 cgaagtgtaa tcccgggagc accgcggtcc aattgcacac tggctcaggt agcgcggtca
     7141 tgcgggacga ccgtagctta gcggcccggg catggcgacg gtccgcggct cgttgcgcca
     7201 cgaggaagca cgagtccacc cgcttcccag aggacttgtt catgagaatc aggtttcccg
     7261 gcaccgtact gtcgggatcc gcgggaccgt gacccgaacg tgaacggatg ccgctagcag
     7321 ccagagcgtc gtaccggcgt tggatcagct acgccgcctg cctctgggct gcctgcttcg
     7381 cagtacccca tatctggtgg gctctcggca ttcctgcagg gtttcccggg ggagccgccg
     7441 gtcatcagct catgatgagc agcgcctggc gctacatcta tgacctgatc gtcatcattc
     7501 tgagcttcct ggcagtgctc atcacgctgg cgctcctgcg tccacctcac ctggtcatcc
     7561 ggaggtgggt gccgcatacc gcggcgtgga ttgcctccgg gatgttggcg ctgcgtggag
     7621 tagcaggcat gatcgtggat ggcacctccg atcccatctg gtggcacctt tctgctgggc
     7681 ggtattctcc tcggcgcagt cgcgtggatg gcgcggtctc cgcgttcgtc atccgccgcg
     7741 tgaattcagg cttgtgagct gggcgaccaa ggtcctggac agcaaaggcc cgctcgcgct
     7801 cattgccagg actcaccacc aacagcttcg taacgataac gcatcaaact agggcgtcct
     7861 gctgatcagc tcgttgcgct cgcgaccgac gcttggcgtg acctcgagga ccagccccac
     7921 tccgccgcag tagtacttgt cagcccggtg gcccggctcg agtggcgtcc actccatcgt
     7981 ctccacgcag ccctcgaaat cgccaaaggg aactgagacc gcttgcgtga gactgaccac
     8041 cttggcccag tcttccgcaa tgtcggcgag gaattcctgg cggtacatct gcccgatgac
     8101 cggattggcc agcatgatga tccccggctg ggccccgctc aggcctgcct cccaggaccc
     8161 ggcggtgccg accagggtac agtggtcgta ttccttggag tcctcgccaa agtaccagac
     8221 agcccctgtg ttatccggtg cgtaccagtc gaaggtctcc tcgatgagct cgctggtaaa
     8281 gccgggatcg gcgccgcagg acgtgccatc ggccactccg ttctcatttt catccacata
     8341 gactcgatca tgaacaacga tcgtcacgac gccgagaatc gtcttggtgc cggaagtcac
     8401 catcacttgg ttaagctcac tgccatcctc ggtccggtac cagtaagtcg acggtgccag
     8461 cgggaagtac ggattggcgg ttcccggaac aaagttcgcc ggcacgatct ggggtgcgta
     8521 tggctggttg ggggtcaacg gc
//
LOCUS       DASYRV010000098         4053 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3570092, whole genome shotgun sequence.
ACCESSION   DASYRV010000098 DASYRV010000000
VERSION     DASYRV010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4053
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3570092"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..629
                     /locus_tag="VGQ24_02445"
     CDS             <1..629
                     /locus_tag="VGQ24_02445"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEV8453721.1"
                     /translation="PSVELGELVSAGALGLMKALDSFDLSRGLAFSTYAVLRIRGAIL
                     DDLRSRDSTPRSVRVKRRRIESVAAALEGELGRAPSAKEVADRLEIDLATYWKWKDAV
                     GSYAEADTPHPTKGRRIPRGAENHADPSATSAPQRLVESEHVAELRQLISRLPEQQRR
                     VLALYYYEELNLRQVGEILQVSESRVSQIRSQALRRLKAEVSASSLGS"
     gene            complement(798..1019)
                     /locus_tag="VGQ24_02450"
     CDS             complement(798..1019)
                     /locus_tag="VGQ24_02450"
                     /inference="COORDINATES: protein motif:HMM:NF017353.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HEV8453722.1"
                     /translation="MGDQKDLATEGLNDELEGTAKKVEGRIRSAVGGATGNTGEQVKG
                     KAQEIKGKAKQAVGRAKEEMDPNPGVDDE"
     gene            complement(1112..2122)
                     /locus_tag="VGQ24_02455"
     CDS             complement(1112..2122)
                     /locus_tag="VGQ24_02455"
                     /EC_number="7.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HEV8453723.1"
                     /translation="MAKSSPSLVEVRELVKHYHSAGLFGRAAPPVRAVDGVSFEVGRG
                     ETLALVGESGCGKSSVGRTILRLQEPTSGKMLFDGMDVFSLDRTRLRELRRQMQIIFQ
                     DPYSSLNPRMTIGAAIAEGIEIHRLAPRAEIPGRVAALLEEVGLDPSYARRYPHEFSG
                     GQRQRIGIARALAVQPAFIVCDEPVSALDVSVQAQVLNLLSDLQQHRGLSYLFIAHDL
                     AVVRQIAHRIAVMYLGRIVEEGATDRILSNPRHPYTVALLSAVPEPDPTARPDRIVLS
                     GDLPSPSHPPPGCPFHTRCFHPLKNERCRTDVPLLRQVGGTVAACHYAEATPTPAEVG
                     AS"
     gene            complement(2115..3101)
                     /locus_tag="VGQ24_02460"
     CDS             complement(2115..3101)
                     /locus_tag="VGQ24_02460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEV8453724.1"
                     /translation="MSRVLEVQDLRVSFPGPDHRRFYPVDGVSFSLQRGKTMALVGES
                     GSGKSLTSLALLQLVPSPGRVETGSVIRLGETDVLALRGEALRRIRGRRVGMIFQDPM
                     TSLNPVFTVGDQIIEGILAHFKMPRAAARERALQLLQEVGIPDPSARLKTYPHQLSGG
                     MRQRVMIAIALSAEPEILVADEPTTALDVTVQAQILEVLDRLQESRGMAVLLITHDLG
                     IVAGRADRVAVMYAGQIVEEAATARLFANPSHPYTQGLFASVPRIKGPLRRLSPIGGS
                     VPAPTAWPSGCRFRPRCPKAFDKSELEPPLLTVEPDHQMRCWLAEEPNKNRG"
     gene            complement(3098..3937)
                     /locus_tag="VGQ24_02465"
     CDS             complement(3098..3937)
                     /locus_tag="VGQ24_02465"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8453725.1"
                     /translation="MKPVLDALAAAWRHPQGRTGALLLLIVAVTAIVGPWLLPDPLAQ
                     PDILAGSMPPGPGHPFGTDQLNRDILSRVVTGARISLSVALLAVTLSMTLGAAVGLVS
                     GYLGGVVDAAVMRLVDGALAIPRLFILLLVLAVWERVPVLALILLIGATGWFATSRIV
                     RAEVLRLREETYVRAAEALGARRRRIIFRHLLPNVVGPLLVTATLAVGDVILLEAGLS
                     FLGLGIQPPMPSWGGMILDSKEVLVSAPWAGIFPGLAIVITVLSANLFGDALRDAVDP
                     RSA"
BASE COUNT          704 a         1353 c         1356 g          640 t
ORIGIN      
        1 ttccatccgt cgaattggga gaattggtca gcgccggcgc attgggcttg atgaaggcgc
       61 tggacagctt cgacctctct cgcggtctcg cgttcagcac ctacgccgtg cttcggatcc
      121 ggggcgcgat cctcgatgat ctgagaagcc gcgattcgac gccgcgctcg gtgcgggtga
      181 agcggaggag aatcgagtcc gttgccgccg cgctggaagg cgagctcggc cgcgcaccga
      241 gcgcgaaaga agtggcggac cgcctggaaa tcgacttggc cacgtactgg aagtggaagg
      301 atgcggtcgg gagctacgcc gaggccgata cgccgcatcc gaccaaggga cgccgcatcc
      361 ctcggggggc cgagaaccac gccgatccct ccgcaacctc ggccccccag cgtctggtgg
      421 agtcggagca cgtcgccgag ctgcgacagt tgatctcgcg cctccccgag cagcagcgcc
      481 gggtactcgc tctgtactac tacgaggagc tgaacctgcg tcaggtcggc gagatcctgc
      541 aggtgagcga gtcgcgggtc tcccagattc ggagccaggc gctgcggcgg ctcaaggccg
      601 aggtctcggc gagctcgctg ggatcgtaga ggcggggaag cgaggaagcg gggaagcaag
      661 aaaaaacaaa aacttgtcac cctgagcgca gcgaaggggc cgaagctgaa acagcagccg
      721 gccccttcgt cattcctggc atttactgtg cagaagtttt tttgcttccc cgcttcctcg
      781 cttccccgct tccccgccta ctcgtcatcc accccaggat tcgggtccat ctcctccttg
      841 gccctgccga ccgcctgctt ggccttgcct ttgatctcct gcgccttgcc cttcacctgc
      901 tcgccggtat tcccggtggc tccgccgacg gcgctgcgaa tcctgccttc gaccttcttt
      961 gcggtgccct cgagctcgtc gttgagcccc tcagttgcga gatctttttg atcgcccatg
     1021 tgtcaccccc gagtgcggga tttaagtcat ccgtgagcct ggaacatcgg ccgctcagcc
     1081 gtgggaggcc gtgaccacgg tcaccgaccg atcagctcgc gccgacctcg gccggtgtgg
     1141 gagtcgcctc ggcgtagtgg cacgccgcaa cggttccccc aacctggcgg aggagcggca
     1201 catcggtgcg gcagcgctcg ttcttgagtg gatggaagca gcgggtgtga aagggacagc
     1261 cgggcggcgg atgcgaggga ctcggcaggt cgccgctcag gacgatgcgg tccgggcgcg
     1321 cggtgggatc cggctcagga accgccgaga gcagggcgac ggtgtatggg tgacgcgggt
     1381 tggagaggat ccggtcggtg gccccctctt ccacgatgcg acccaggtac atcaccgcga
     1441 ttcggtgcgc gatctgtcgc accaccgcga gatcatgggc gatgaacaga tacgagaggc
     1501 cgcgatgctg ctggagatcg gagagcaggt tgagcacctg agcctgcacc gatacgtcga
     1561 gtgccgagac cggctcgtcg cagacgatga acgccggctg caccgcgagc gcccgggcga
     1621 tgccgatccg ctgccgctgg cctccggaga actcgtgggg atagcgccgc gcgtagctgg
     1681 gatcgagccc cacctcctcg agcagggcgg caacccggcc cgggatctcc gctcgcggtg
     1741 ccagccggtg gatctcgatt ccttcggcga tggccgcgcc gatggtcatc cgtggattga
     1801 gggagctgta cgggtcctgg aagatgatct gcatctgccg ccgcagctcc cgaagccgcg
     1861 tgcggtcgag cgagaacaca tccatcccat cgaacagcat cttaccgctg gtcggctcct
     1921 gaaggcgcag aatcgttcgc ccgaccgacg acttgccgca gcccgactcg cccaccaacg
     1981 cgagcgtctc cccccggccg acctcgaacg acaccccgtc taccgcgcgt accggtggcg
     2041 ccgcccggcc aaacagtccg gcggagtggt aatgcttcac cagctcgcgc acttcgacca
     2101 gagaaggaga ggacttagcc acggttcttg tttggttctt ccgcgagcca gcagcgcatc
     2161 tggtggtcag gctcgaccgt cagcagcggg ggctccagct cgctcttgtc gaacgccttc
     2221 ggacaccggg gacgaaaccg gcagccgctg ggccatgccg tgggcgccgg aacgcttccg
     2281 ccgatcggac tgagccggcg gagcgggccc ttaatcctcg gcaccgaggc gaagagcccc
     2341 tgggtatatg gatgggatgg attggcgaac agccgagcgg tcgccgcttc ctcgacgatc
     2401 tgtccggcgt acatcaccgc cacccggtcg gctcgccccg ccacgatgcc gagatcgtgg
     2461 gtgatcagca ggaccgccat gccccggctt tcttgcagcc gatccagcac ctccagaatc
     2521 tgcgcctgca ccgtgacgtc gagcgccgtc gtcggctcgt cggccaccag gatctccggc
     2581 tccgccgaga gggcaatagc gatcatcact cgctggcgca tgccgccgct gagctgatga
     2641 gggtacgtct tgagtcgtgc tgacgggtcc ggaataccca cttcctggag cagttggagt
     2701 gctcgctctc gtgcggccgc gcgcggcatc ttgaagtgcg ccaggattcc ttcgatgatc
     2761 tggtcgccca cggtgaagac cggattcaag ctggtcatcg ggtcctggaa gatcatgccc
     2821 acccggcggc cccggatccg ccggagcgcc tcgccccgga gggcgagcac gtcggtctcg
     2881 cctagccgga tcacgctgcc ggtttccacc cgtcccggag atgggaccag ctggagcagg
     2941 gcgaggctgg tgaggctttt ccccgagccg gactccccca cgagcgccat ggtcttaccc
     3001 cgctggagcg agaagctcac cccgtccacc ggatagaatc ggcggtggtc gggtccggga
     3061 aacgagaccc tgagatcctg cacctcgagc actcggctca tgcgcttcgg ggatccacgg
     3121 cgtcgcgcag ggcgtcgccg aacaggttgg cggatagcac ggtgatcacg atggcgaggc
     3181 ccgggaagat gccggcccag ggtgcgctca ccagcacctc tttggaatcc aggatcatcc
     3241 cgccccagga tggcatgggg ggctgaatcc ccaggccgag gaaggagagt cccgcttcca
     3301 gcaggattac gtcgcccacg gcgagcgtcg ccgtcaccag tagcggaccg accacattgg
     3361 gaagcaagtg ccggaagata atccggcgcc ggcgggcacc gagcgcctcg gccgctcgca
     3421 cgtaggtctc ttccctcagc ctcaggacct cagcccgcac gatgcgactg gtggcaaacc
     3481 agccggtcgc cccgatgagc aggatcagcg caaggacagg tactcgctcc cagaccgcga
     3541 ggaccagcag caggatgaag agccggggga tggcgagggc tccatctacc aggcgcatga
     3601 ctgcggcatc gaccacacca ccgaggtagc cggagaccag tccgaccgcc gcaccgaggg
     3661 tcattgaaag cgtcaccgcc agcagcgcga cactgagcga gatgcgggcg ccggtcacga
     3721 cccgcgagag gatgtcgcgg ttgagctggt cggtgccgaa gggatgcccc gggcccgggg
     3781 gcatgctgcc cgccaggatg tccggctgcg ccagcggatc aggaagaagc cagggcccca
     3841 cgatcgcggt gacggcgacg atgagcagaa gcagcgcacc ggtccggccc tggggatgac
     3901 gccacgcggc cgcgagggca tcgagcaccg gcttcacgcc agtcgcaccc ggggatcgag
     3961 cagcgcgtac gcgacatcgg tggcgaaccc gcttgccacc acgatcgccg cgaccagaag
     4021 cgacgtgccc atcagcagcg gatagtcgcg gct
//
LOCUS       DASYRV010000099         9420 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3343323, whole genome shotgun sequence.
ACCESSION   DASYRV010000099 DASYRV010000000
VERSION     DASYRV010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9420
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3343323"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1286)
                     /locus_tag="VGQ24_02470"
     CDS             complement(<1..1286)
                     /locus_tag="VGQ24_02470"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF025002.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEV8453726.1"
                     /translation="MRRFGVLMSLVLAASLGACGSFRDLFSAHADVVAEAGDQRLTPQ
                     RLNQIMTGAKGMRANREAADFVTNTWVDYSLFGQAVADGKLPLDSASIAKAVWPELAE
                     LRGSHWHDSLMARRSNLSPTAADSTYQANQVRVLQHILFRTPQNAVPEVRNAARKKAE
                     GTLARIKRGTDFGRLASQVSEDPGSKRDNGFLPPSPKGKFVPAFDSAGWSLAPGAVSG
                     VVETPFGYHIIKRPSQDAVRERLNAYLVQTAGTRLDSIYMDSLAIINKIKISKGAAAA
                     MRAAGENPEEARNSKKTLTSFKGGELTIGEFMRWVRALPPQYVAQLKQADDSMLTQFA
                     KILTQNVLLLRQADSAKIGVTPEEWKSIEEHYRGQLDTLRIEMGLDTAALWDSSVAKA
                     DRNKVAAMKVDQYFERLLSGKSRLRPLPSALATLLR"
     gene            complement(1483..4791)
                     /gene="mfd"
                     /locus_tag="VGQ24_02475"
     CDS             complement(1483..4791)
                     /gene="mfd"
                     /locus_tag="VGQ24_02475"
                     /inference="COORDINATES: protein motif:HMM:TIGR00580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEV8453727.1"
                     /translation="MSLKPVVDAFERAPAVRDLGDRLPGRGATLRLGGLAGSSGAALV
                     AWLARTYPQRLLTVMAPAPADAERWLSDLAQLTEVPTALYPQREALGEDEPHYEIAGE
                     RAETIQALLEGRLRILVTTARATAERTLLPAALQRLSLRLAVGDSRPPAQVARSLEAM
                     GYQRVPTVSEVAEFSVRGGILDLYGFGMATPARLEWWGDEISSLRGFDLTTQRSLQEL
                     SDITVLPINTLAVREEADGRTDGQADSSMTSSDRPTARPPVRHTLLELLPSDTLLIQE
                     AAGPDSDEVNRAWNEAAHHLEVARRLGEDVPSRESIFQPPGEWRGRLEQFPRLLLRDE
                     QVDLQFGFFPPERIDRDLNRLRSLLGPGLPTLILCDNEGQLERMEELLEFRANSAMLA
                     IGALDGGFVMPSLRVLTDHEIFRRARRLRRPRRYRESAPSGATGALTLGDYVVHLEHG
                     IGIYRGIETITAGESTLEVAIVEYEGGDRLNVPLYRLDQLERYRASGEDGDRPPPRIH
                     RLGGSTWQRVREKTRQAIKQMAAELLDLYARRKVTGGYAFPPDTKWQRELESSFLYED
                     TPDQRTATEEVKQDMEKPLPMDRLLVGDVGYGKTEIAVRAAFKAVQGGKQVAVLVPTT
                     ILAEQHGRTFIERLADFPVKIEVLSRFRTQKEQKAALARLANGQTDIVIATHRLLSKD
                     VVFKDLGLLVVDEEHRFGVKHKERLKALRLSVDVLTLTATPIPRTLHLSLAGLRDLTL
                     IETPPRDRSPILTFVEPWDDALLEEAFAREIDRGGQVFVVHNRIETIDTIAARVRTLA
                     PRSRVGVAHGQMPAEELEKVMRCFVAGEVDILVSTMIVESGLDVANANTMVVHDAHRF
                     GLAQLYQLRGRVGRSHRRACCYLLVPDSIDAEAEERLKVLEHHTDLGSGYRIALRDLE
                     LRGAGNLLGAEQSGHAQAVGFDLYLRWLEETVRSLRGQGTVEQPAPPDVVLDRPAHLP
                     DGYVPDDDVKLDLYRRLARSVSSGEIDGLRDELRERFGPLPATAETLLDVTRLRVMGA
                     ALGLQNVLVRGDEARLTFRPGTTPRLAGLTSALDDVQLAAEVRRTVPLSLRLLRLGGE
                     PIVPALVRALRKAS"
     gene            complement(4788..6572)
                     /locus_tag="VGQ24_02480"
     CDS             complement(4788..6572)
                     /locus_tag="VGQ24_02480"
                     /inference="COORDINATES: protein motif:HMM:TIGR02226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatA domain-containing protein"
                     /protein_id="HEV8453728.1"
                     /translation="MIGFLHPWVLAGLAAAAVPILLHLLARREPPTVAFPAVRYLVTT
                     TLEHQRRLKLQNWLLLLLRTLLIAMVVLAAAGPTVPLSGVPGHAPSALVLLVDNSPSS
                     GAVVGGAPQLRQLVAAARRVLDRATPEDALWLVTADGIPRRGDRVTLGELLGQLTVSP
                     RRLDLGVAVTLANEVLASEPRPGEIVLLTDLQASALSPAPRTVPLLVGRPDAVPPINV
                     GIGRLETGAQPWSSDGGRITVSLVGDSGAAVPVSARLGNRPARQVLGRAGAATAVNLP
                     ATPSGWWTLTAELDPDEFRLDDRRVAAVRVAPVARVSWDSASRYVAAASEVLAANQRI
                     QRGQEVALGRLGRGTSVVQPPQDPAELGALNRALAVRGVGWSYGNPTTGSGYSDSGAV
                     VGRHRVIRRYVLQSGGSGRTGVLATVNGAPWIVRGGNVVLLGSRLDPAWTDLPVSAGF
                     MPFMDVLLNRLARGEIALDHGAPGDPVILPDLVTEVRQGDRQWRVEGGGLFQASEPGV
                     YYLVAGRDTVGAISVNPDARESRLARATDGQARELWKGARVVPLAEASEMAFSSSSRG
                     DLRGPLLWMALAVGMMEVGLASAWRRRR"
     gene            complement(6569..7495)
                     /locus_tag="VGQ24_02485"
     CDS             complement(6569..7495)
                     /locus_tag="VGQ24_02485"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HEV8453729.1"
                     /translation="MYLSDPSSGHARLDLLDPMEVSKLGGLEIITQGVVEGFLSGLHR
                     SPRRGFSVEFAEHRMYQAGDDLRYVDWKILGRNDRLYVKQFEEETNLRAIVVCDTSRS
                     MAWSGSPETVLPKLAYAQRLIAALSLVLIRQRDATGLITFDDDVRTVTPPRARLSHWR
                     QLLQVLASLEAGQGTAAEPALRRVIGQLRRRGLVVFVSDLLLDSALALKALRFLRHRG
                     HQVLVLHIMDPGEVVLGGPTEARFEDPETSAAVVLRPRDWAGAYRDTVQRVVSEWRLA
                     CRRHGIAYHRVTTDTPFGTVLREALTPPSRPA"
     gene            7494..9173
                     /locus_tag="VGQ24_02490"
     CDS             7494..9173
                     /locus_tag="VGQ24_02490"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEV8453730.1"
                     /translation="MGRATYPLATEEVKRRRLIQPNLSHVILGLPYSGARPNPPAPAE
                     ARQQVKPSAGAIRSETTMKLLRLCSILAAAPLAAQSNGAPVEAVATITPLDVVRRVAI
                     IADDSMMGRDTPSRGLELTAEYVASEFRRAGLHPAGDSGGYIQRFGLSRWVVDTAESA
                     VKLTARRSRAIARLGIDARYIDGPIPEGPIRGEVVLLSGASAAGDVTDRIILLVADFS
                     GPIRASLTQQVLGLGATGAKAVIVLSNRDSAAFAEALRVTTPRFTRDSARSTDKGAPI
                     LAVHDRAVTGVLAAAGIDPARLRSSARPERRLVRGLAVEIRLVKKVLAHVRAPNVVGI
                     LQGTDPALDHEYLAYSAHIDHIGITPGQPDSINNGADDNASGVAGLLELVEAFSVPGA
                     RPRRSLLFLAPSAEERGLLGSAHFTEHPTVPIGSIVADINMDLIGRNWPDSVIAVGVE
                     QSDLGETLDRVVRAHPELRMRPIADRWPEERIFYRSDHYNFARRGVPVLFFTSGTHPD
                     YHRPTDQPSRINGEKESRLLRLLFYVGADISNRDSRPQWHPESYRQIVDRR"
     gene            9205..>9420
                     /locus_tag="VGQ24_02495"
     CDS             9205..>9420
                     /locus_tag="VGQ24_02495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453731.1"
                     /translation="MHRLTLLALALTVAPVSAQTAPALSRAAASITASDVAHRIGIIA
                     ADSMMGRDTPSRGLELTAAYVADQFQKF"
BASE COUNT         1603 a         3235 c         3061 g         1521 t
ORIGIN      
        1 tcgcgcagca gcgtcgccag cgcggagggc agcggacgga gccgagactt gcccgagagc
       61 agccgctcga agtactggtc gaccttcatg gctgcaacct tgttccggtc ggccttggcg
      121 acgcttgaat cccacagcgc cgcagtgtcc agccccatct cgatgcggag cgtatccagc
      181 tggcctcgat agtgttcctc gatgctcttc cactcctccg gcgtgacccc aatcttcgcc
      241 gagtcggcct ggcggagcag cagcacgttc tgggtgagaa tcttggcgaa ctgggtgagc
      301 atgctatcgt ccgcctgctt caactgggcg acatactgcg gcggcagtgc ccgcacccac
      361 cgcatgaact cgccgatggt gagctcaccg cctttgaagg acgtgagcgt cttcttcgag
      421 ttgcgcgcct cctccggatt ttcaccagcc gctcgcatgg ccgcggccgc gcctttggag
      481 atcttgatct tgttgatgat cgccaggcta tccatgtaga tggaatcgag ccgggtccct
      541 gcggtctgca ccaggtatgc gttgagccgc tcacggaccg cgtcctggct gggacgcttg
      601 atgatgtggt agccgaacgg cgtctccacg acgccactga cagcgccagg cgcaagactc
      661 cagcctgcgc tgtcgaaggc gggcacgaac ttccccttcg gactgggcgg caggaaaccg
      721 ttgtcccgtt tgctgcctgg atcttcggaa acctgggacg cgagccggcc gaaatcggtg
      781 ccgcgcttga tcctcgcgag ggtgccttcg gccttcttcc gggcggcatt gcgcacctcg
      841 ggcaccgcgt tctgcggggt ccggaagagg atgtgctgaa gcactctgac ctgattggcc
      901 tgataggtac tgtcggctgc cgtgggagaa aggttggacc ggcgggccat cagcgaatca
      961 tgccagtggc ttccccgaag ctcggccagc tcgggccata cggccttggc gatactcgcc
     1021 gaatcgagcg gcagcttgcc gtcggccacc gcctgcccga acaacgagta gtccacccag
     1081 gtgttggtga cgaagtccgc cgcctcgcgg ttggcccgca tgcccttggc ccccgtcata
     1141 atctgattca accgctgtgg ggtcagtcgc tggtctcccg cctcggccac cacgtccgcg
     1201 tgcgccgaga agagatcgcg gaagctgccg caggcgccga ggctggccgc cagcacgagg
     1261 gacattaaga cgccgaaccg acgcatttgt actccgttta aaaaggtcta gagtctaagg
     1321 tcgcgagtcg cgagtcacga gtggaaaatc tcctcatcct gagcggagcg aaggatcttc
     1381 tcagcctttt acggaacgtc gtaaagtaga tccctcgctt cgctccggat gaggcggtcc
     1441 acttggctcg cgactcccga ctcgtgactc gcgacttcat aatcacgaag ccttccgcag
     1501 cgcacgcacc agagccggca caatcggctc tccgcccaac cgcagcagcc ggagcgatag
     1561 cggaacagtg cgacggactt ccgcggccag ctgtacatcg tccagggcag acgtgagccc
     1621 ggcgagcctg ggcgtcgtcc cgggccggaa ggtgagacgc gcttcgtctc cccgcaccag
     1681 cacgttctgc aggccaagag ccgcccccat gacgcggagc cgcgtcacat cgagcaacgt
     1741 ctcggcggtg gccggcaagg gaccgaagcg ttcccgcaac tcgtcacgca gcccgtcaat
     1801 ttcgccggat gacacagacc gcgccagtcg gcgatacagg tcgagcttga cgtcgtcgtc
     1861 cgggacgtag ccgtcgggta ggtgcgcggg gcggtcgagc accacatcgg gcggcgccgg
     1921 ctgctccacc gtgccctggc cccgcagcga ccggacggtc tcctccagcc agcggaggta
     1981 gaggtcgaac cccactgcct gagcatgacc cgactgctcc gctcccagga gattgcccgc
     2041 cccccggagc tcgagatccc gcagcgcgat ccggtagccg gagcccagat ccgtatgatg
     2101 ctccagcacc ttgagacgtt cctcggcttc cgcgtcgatg gagtcgggca ccagcaggta
     2161 gcagcaggcc cgccggtggc tccgcccgac ccggccccgc agctgataga gctgcgccag
     2221 cccgaagcgg tgagcgtcgt gcaccaccat cgtgttcgcg ttggcgacat cgagccccga
     2281 ttccacgatc atggtggaga cgaggatatc cacttcaccc gcgacaaagc accgcatcac
     2341 cttttcgagc tcctccgccg gcatctgccc gtgcgccacc cctacccgcg accggggcgc
     2401 gagtgtccgg acccgtgcgg cgatggtatc gatcgtctcg atccggttgt ggaccacgaa
     2461 cacctgcccg ccgcggtcga tctcccgggc aaacgcctcc tccagtagag cgtcgtccca
     2521 cggctcgacg aaagtcagga tcggagatcg gtcgcgcggc ggagtctcga tcagggtcag
     2581 atcccggaga cctgccagcg acaggtggag tgtccgggga atcggggtgg cggtgagcgt
     2641 gagcacgtcg accgaaagcc gcagggcctt gagccgctcc ttgtgcttca ccccgaatcg
     2701 gtgctcctcg tctaccacca gcaggccgag gtccttgaaa acgacgtcct tggacaggag
     2761 ccggtgggtg gcgatcacga tgtccgtctg tccgttggcc aggcgcgcga gcgccgcctt
     2821 ctgctccttc tgggtccgga agcgggagag aacctcgatc ttgaccggga agtcggccag
     2881 gcgctcgatg aaggtccggc cgtgctgctc ggccagaatc gtggtgggta ccaagacggc
     2941 gacctgcttc cctccctgca cggccttgaa cgcggcgcgc acggcgatct cggtcttgcc
     3001 gtatccgaca tcgccgacca gcaggcggtc catgggaagc ggcttctcca tgtcctgctt
     3061 gacctcctcc gtggccgttc gctggtcggg agtgtcctcg tagagaaagc tggactccag
     3121 ctcccgctgc cacttggtgt cgggtggaaa ggcatagccg ccggtgacct ttctccgggc
     3181 gtagagatcg agcagttcag ccgccatctg cttgatggcc tgtcgggtct tctcccgaac
     3241 ccgctgccag gtcgatccgc cgagacggtg gatccgcgga ggcggacgat ctccatcttc
     3301 accggaggcg cgatagcgct cgagctggtc gagccggtag agcggcacgt tgagccggtc
     3361 gcccccttcg tactccacga tcgccacctc gagcgtggat tcgcccgcgg taatggtctc
     3421 gatgccacga tagatcccga ttccgtgctc gaggtgcacg acgtagtcgc ccagcgtcaa
     3481 tgcacccgtg gcccccgacg gcgcggactc gcggtagcgg cgcggccggc gcaaccggcg
     3541 cgcccggcgg aagatctcat ggtcggtgag cacccggagc gagggcatga cgaagccgcc
     3601 gtcgagagcc ccgatggcga gcatggcgct gttggcgcgg aattcgagca gctcctccat
     3661 ccgctcgagc tgcccctcgt tgtcgcaaag aatcagggtt ggaaggccgg gtcccagcag
     3721 cgagcgcagg cggttgagat cccggtcgat ccgctcgggc gggaagaagc cgaattgcag
     3781 gtccacctgc tcgtcccgca gcaggagacg ggggaattgc tcgagccgcc cgcgccactc
     3841 gcccggcggc tggaagatgc tctccctgct gggcacgtcc tcacccagac gtcgggctac
     3901 ttcgagatgg tgcgcggcct cgttccaggc gcggttgacc tcgtcggagt cgggcccggc
     3961 agcttcctgg atcaggagcg tgtcagaggg gaggagctcg aggagagtgt gacggacggg
     4021 cggtcgggcg gtcgggcggt cggacgaagt catcgagctg tccgcctgtc cgtctgtccg
     4081 cccgtccgcc tcctctctca ccgccaatgt attgatcggc aagaccgtga tgtcgctcag
     4141 ctcctggagc gatcgctggg tcgtcagatc gaatccgcga agcgaggaga tctcgtcgcc
     4201 ccaccactcc agccgcgcgg gcgttgccat gccgaagccg tacaggtcca ggattccacc
     4261 gcgtacgctg aactcggcca cctcgctgac ggtcggcacc cgctggtatc ccatagcctc
     4321 gagcgagcgg gccacctggg caggcgggcg gctgtccccg acggccaacc tcagactcag
     4381 ccgctggagt gcggcgggca ggagggttcg ttccgcggtc gcgcgcgccg tggtcaccag
     4441 aatacgtagc cgcccctcga gcagcgcctg gatcgtctcc gctcgctcgc cggcgatctc
     4501 gtaatggggc tcgtcctccc ccaacgcttc tcgttgagga tagagagcgg tagggacttc
     4561 ggtgagctgc gccaggtccg agagccaccg ctcggcgtcc gctggcgccg gggccatcac
     4621 cgtcagcagg cgctgcggat aggtccgggc cagccacgct accagcgccg ccccgctcga
     4681 gccggcaaga cctcccagcc ggagcgtggc accacggccc ggaagacgat cgcccagatc
     4741 ccgcacggca ggcgcgcgct cgaacgcatc gactaccggc ttcaggctca ccgccggcgc
     4801 ctccaggcgc tcgcgagacc cacttccatc atgccgaccg ccagcgccat ccagagcagt
     4861 ggaccccgga gatccccccg ggacgatgag gagaacgcca tctcgctcgc ttcggccagc
     4921 ggcaccaccc gcgcgccttt ccagagctcc cgtgcctggc cgtcggtggc ccgcgcgaga
     4981 cgcgactccc gggcatccgg gttcacgctg atggctccaa ccgtatcgcg acctgcgacc
     5041 agatagtaca cgccgggctc ggaggcctgg aagagtccgc caccttctac tctccattgc
     5101 cgatcgccct gtcgcacttc ggtcaccaag tcgggaagta tcactgggtc gcccggcgcg
     5161 ccgtggtcca gggcgatctc gccgcgagcc agccggttga gcagcacgtc catgaacggc
     5221 atgaagccgg ccgacaccgg cagatcggtc caggccggat cgagccggct gccgagcagg
     5281 actacgttgc cgccgcggac aatccagggt gctccgttga ctgtggcgag taccccggtg
     5341 cgaccgctcc caccggattg aagcacgtag cgccggatga cccggtggcg accgaccacg
     5401 gcgccgctgt cgctatatcc cgatccggta gtcgggttgc cgtagctcca tccaactccg
     5461 cgcacggcca gcgcccggtt cagcgcaccg agctcggcag gatcctgggg tggctgcacc
     5521 accgaggttc cccgcccgag gcggcccagc gcgacctcct ggccccgctg gattcgttgg
     5581 ttggcagcga gcacctcgga ggccgcggcg acgtaacggc tcgccgagtc ccagctgacc
     5641 cgcgctacgg gagccacccg cacggcagca acccggcggt cgtccagacg gaactcgtcc
     5701 gggtcgagct ccgcggtgag ggtccaccac ccactcggcg tcgccggcag gttgacagcc
     5761 gtcgcggcgc cggcccgccc gaggacctgg cgcgcaggac ggttccccag acgcgcgctg
     5821 accggcaccg cggcacccga gtcgccaacc agtgacaccg tgatgcgacc gccgtcggaa
     5881 gaccacggct gcgcaccggt ctccaggcgc ccgatcccca cgttgatcgg cggcaccgcg
     5941 tcgggtcgcc ccaccagcaa cggcaccgtg cgcggtgcgg gcgagagcgc gctggcctga
     6001 aggtcggtga gcagcacgat ctcacccggc cgaggctccg acgcgagtac ctcgttcgcg
     6061 agcgtcaccg cgacgcccag gtccaggcgc cggggcgaga cggtgagctg cccgagcagc
     6121 tcccccaggg tgacccggtc accgcgccgc gggatgccat cagctgtcac cagccagagc
     6181 gcgtcctccg gtgtcgcccg gtcgagcact cgccgagccg cggccaccag ctgccgaagc
     6241 tgcggcgcac cgcccaccac agccccactg ctgggtgagt tgtccaccag gagcaccagg
     6301 gcgctcggcg catgtcccgg tacgccgctg agcggtaccg tggggccggc agccgcgagc
     6361 accaccatgg cgatcaacag cgttctgagc aggaggagca accagttctg gagcttgagt
     6421 cggcgctggt gctccaatgt cgtggtgacg agatagcgaa ccgcggggaa ggcaacagta
     6481 ggtggctctc gccgggctag caggtggagg aggatgggga ctgcggcagc ggccagacca
     6541 gccagcaccc acgggtgaag aaatccaatc atgccggacg tgagggtggc gtcagagcct
     6601 cgcggagaac ggtgccgaac ggcgtgtcgg tggtgactcg gtgataggcg atcccgtggc
     6661 gccggcaagc aagacgccac tcactcacca ccctctgaac cgtgtcccgg tacgcccccg
     6721 cccaatcccg cggccggaga accaccgccg cgctggtctc cggatcctcg aaccgtgcct
     6781 cggtaggtcc acccagaacg acctcgccgg gatccatgat atggaggacc agcacctgat
     6841 ggccgcggtg gcgcagaaat ctcagggcct tgagcgccag cgcactatcc agcagcaggt
     6901 cggagacgaa caccaccagt cctctgcgcc gcaactgccc gatgactctc ctgagagccg
     6961 gctccgccgc ggtgccttga ccagcttcca ggctcgcgag cacctgaagc agctggcgcc
     7021 agtgactcag gcgggcccgc ggcggtgtga ccgtgcggac atcatcatcg aaggtgatca
     7081 agccggtggc gtcgcgctgc cggatcaaga ccagactcaa ggccgcaatg agccgctggg
     7141 cgtaggccag cttggggaga accgtctcgg gcgatccact ccatgccatc gagcggctgg
     7201 tatcgcacac cacgatggcc cggaggttcg tctcctcctc gaactgcttc acatagaggc
     7261 ggtcgtttcg cccgaggatc ttccaatcca cataccggag gtcatcaccc gcctggtaca
     7321 ttctgtgttc ggcgaactcc acggagaaac ctcgccgggg cgaccggtgc agcccgctga
     7381 ggaacccctc caccacaccc tgggtgatga tctcgaggcc gccgagcttg gacacctcca
     7441 tgggatcgag caagtccagg cgggcatggc cggaagaagg atcggaaagg tacatgggac
     7501 gggcaacgta tccgctcgcg accgaagaag tcaaacgccg ccggctcatt caaccgaacc
     7561 tctcccacgt catcctgggg ttaccgtaca gtggggctcg gcccaaccca ccggcgccgg
     7621 ccgaagctcg acagcaggtg aaaccgtcgg ccggggcaat ccgtagcgag accaccatga
     7681 agctgctgag actatgctcg atcctggctg ctgccccgtt ggccgcacag agcaacggag
     7741 cgccggtgga agccgtggct acgatcacgc cactcgatgt cgtgcgtcgg gtcgccatca
     7801 tcgccgacga ctcgatgatg gggcgagata cgccgagccg agggttggag ctcaccgccg
     7861 aatacgtggc ttcggaattc cggcgggccg ggcttcatcc cgcgggtgat agcggcggat
     7921 atatccagcg cttcggtctc agccgctggg tagtggatac ggcggagtcg gcagtgaagc
     7981 tcacagcgcg gcgctcccgc gcgatcgcgc ggctcgggat tgatgcgcgc tacatcgacg
     8041 gccccattcc ggaagggccg attcgaggtg aggtagttct cctctcagga gcgagtgcgg
     8101 ctggggacgt cacggaccgc atcatcttgc tggtggccga cttctctgga ccgatcaggg
     8161 caagtctgac tcagcaggtt ctcgggctcg gcgctaccgg cgccaaagca gtcatcgtgc
     8221 tctcgaaccg ggactcggct gccttcgccg aggccctgag agtgaccact ccgcggttta
     8281 ctcgggattc tgcccgcagt accgataagg gtgcccccat tctcgcggtc cacgaccgcg
     8341 cggtcaccgg cgtgttggcc gcggccggca ttgacccggc tcgcttgcgg tcgagcgcgc
     8401 gaccggagcg aagactcgtg cgaggcctag ccgtcgagat ccgtttggtc aagaaggtcc
     8461 tggcgcacgt ccgggcgccg aacgtcgtcg gcatcctgca gggcaccgat ccggcgctcg
     8521 atcacgagta cctcgcttat tcagcgcata tcgaccacat cggtatcacc ccagggcagc
     8581 cggacagcat caacaatggg gcggacgaca atgcgtcggg cgtcgccggt ctgctggagc
     8641 tggtggaagc cttcagcgtg cccggcgcac gtccgaggcg gtcgctcctc ttcctggcgc
     8701 cgagtgcgga agagcgcggc cttctgggaa gcgcgcactt cacggagcat cccaccgtcc
     8761 cgatcggaag catcgtggca gacatcaaca tggatctgat cggacggaac tggcccgact
     8821 cggtcattgc ggtgggggtc gagcaatccg atctaggtga gacactggac agagtggtcc
     8881 gggcgcatcc cgagctgcgg atgaggccca tagccgaccg gtggccggag gagcggatct
     8941 tctatcgctc ggatcactac aactttgccc gccggggtgt gccggttctc ttcttcacca
     9001 gcggcacgca tcccgattat catcggccga ccgaccaacc gagccgcatc aacggagaaa
     9061 aagaaagccg gctgctgcgg ctcctgttct acgtcggcgc ggacatctcg aaccgggact
     9121 cgcgtcccca gtggcatccc gagagctacc ggcagatcgt ggatcgccga taagctcctc
     9181 aaccgactcc ttacaggacc tcgaatgcac cgcctgaccc tgctcgccct ggctctcact
     9241 gtcgcaccag tctccgccca gacggcaccc gccctgtctc gtgcggcggc cagcattacc
     9301 gcgtccgatg tcgctcaccg aatcggcatc atcgccgcgg actcgatgat gggccgagat
     9361 actccaagcc gcggactgga gctgactgct gcgtacgtag ccgaccagtt ccagaagttt
//
LOCUS       DASYRV010000100         4522 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_871374, whole genome shotgun sequence.
ACCESSION   DASYRV010000100 DASYRV010000000
VERSION     DASYRV010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4522
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_871374"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..448
                     /locus_tag="VGQ24_02500"
     CDS             <1..448
                     /locus_tag="VGQ24_02500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453732.1"
                     /translation="SQYVDLEVPGAEVSRVSVEAIPGAAFGLQKISGDGQSAPVNDDL
                     PDPLVVRVVDQYGNGVSGVTVEWRTCDGIGDYNSPTDIGGYASAFQSTGPTPGEFCAM
                     ASSSGLAGSPVKFSYTVTSVAAPSSSSSSGQIRAIPPASTRQHQIP"
     gene            454..1047
                     /locus_tag="VGQ24_02505"
     CDS             454..1047
                     /locus_tag="VGQ24_02505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453733.1"
                     /translation="MPTFGPWLVPWIILGTLWGDLEAQSAQPYSLQASGLINGVFGDV
                     FTGLQDGIGGEAQFRYTPGALSVGVGFQFTVHELEGRNEDARLYGGFIEPRYRIHVGS
                     NVVAPYVSARFSVLKVGFSGGDLSLSSSFIQLNGGGGLLTRLGSRLNLDLGATYGYNR
                     LGNGTLTSKSSGTAVPVESSSGSNVVIRLGLAIGLRD"
     gene            complement(1315..4161)
                     /locus_tag="VGQ24_02510"
     CDS             complement(1315..4161)
                     /locus_tag="VGQ24_02510"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEV8453734.1"
                     /translation="MLEVNASPEPDLGSWGEVVQRLRRATLGEFEIGRELGRGAMAAV
                     FLAHEISLDRKVAIKVMSPGLLMDEGMAERFKREAITIAHLNHPNIVSVHSVRQAGGL
                     HFFVMRYIRGRALEQVIQQAGRLPIPIVRSILFQVGSALTYAHRSGVVHRDIKPANIL
                     IDEDGNAVVTDFGIAKVAELPSATHPGALVGTPAYMSPEQCSGAEVSGASDQYALGVV
                     AYEMITGISPFTGSTLTVMQAHLEQPPQPIQDRCGECPPELEAAVLRMVEKDPAARWP
                     SIAQAKVALGAAPLGEDDPLLAELCRLATPDWTTSLPGRPTLATPRTRSVRPPTPAGL
                     VRTISILPPPAALETGDSFMLVALLRGDRGTPLPGRPVQWATDTPEVLRVDGLAGVAT
                     AVAPGAARLTATCEGVRARLQVQIAPPLADDAEVQPDARVTAIQISAPPKSVKAGDSF
                     ALTATPLDYRGGFLLGHTVQWSTSDVSVAIVTASGWVATLGQGAVVLKATCEGASAAV
                     SINVEQAAPATKRPRPPSPKPRALEPAVEEYRPIRRRRASRSRQRRFLAASVGVLLLI
                     PVLWLSGGLRDMLPNTSKPSTTRPAVDGKAFQLTPAEPVAAILRGAPASVTIRRGPRR
                     PLLSGASTRLLAEVRDLAGQTVPGSTVRWSSTDSGIARVDSASGWVRAVRPGRALVVA
                     AAGEWRDSVAIVVGRPTAEPPAAASVSIAPHGSLRVGDTVTLAAAVLDARGAPLAGAA
                     VAWRSSEPRLAAVDALTGRVRAYAPGTVTIIATSGSNAARSQVTVLPADLPADTLAVQ
                     GYESEPPPEEPEETGAEPAVTLPEKPEAERQRLDASILTGVQQCYDALRSKNVARVAE
                     LYRPTKKSDERKLSKLTRILRTEEWGAVVGERVDGPRQLGTEAAAMEFSFQLGWKDAF
                     GGRLTSRPVFRAEFAKNGNEWEISSCRMVGSPKL"
BASE COUNT          777 a         1478 c         1491 g          776 t
ORIGIN      
        1 cagccagtac gtcgatctcg aggtaccggg ggcggaggtc tcccgggtca gtgtcgaagc
       61 gataccgggt gccgcgttcg gtctgcagaa gatctccggc gacggtcaat cggctccggt
      121 caatgacgat ctccctgacc cactggtggt ccgcgtggtg gaccaatacg ggaatggcgt
      181 cagtggcgtg accgtcgagt ggaggacctg cgacggtatc ggcgattaca actcccccac
      241 agacatcggg gggtacgcga gcgctttcca gtcaaccggc cccacacctg gcgagttttg
      301 cgccatggcg tccagctcag gcctggccgg ctcgccggtg aagttctcct ataccgtgac
      361 atcagtagct gcgccgtcga gctcctcatc gagcgggcag atccgagcga ttccgcctgc
      421 gtccacgcga caacaccaga taccgtgaag cgcatgccga cgtttggccc atggttggtg
      481 ccgtggatca tactaggaac actctggggc gatctcgagg cacagtcggc gcaaccgtac
      541 tcactccagg catcggggct catcaacggg gtgtttgggg acgtgttcac cggcttgcag
      601 gacggcatag gcggggaagc acagttccgc tacacgcccg gggcactgtc agtcggcgta
      661 ggcttccaat ttaccgtcca tgaactggaa ggccggaacg aagacgcgcg gctctacgga
      721 gggttcatcg aaccgcgcta ccggattcac gtgggaagca acgtggtggc accctacgtt
      781 tcggcgcggt tctcagtgct caaggtcggc ttttccgggg gagacctttc gctgtcctcg
      841 agcttcatcc agctgaacgg cggaggtggg ctcctcaccc ggctcggttc gcggcttaat
      901 ctcgacttgg gagccaccta cgggtacaac cgtctgggaa acggcacgct gaccagcaaa
      961 tcgagcggca ccgccgtacc ggtagaatcg agctccggct caaatgtcgt tatccgcttg
     1021 ggtctcgcga ttgggcttcg cgactgatac aaggggcggg gcggccagcg gaactgggct
     1081 gagccccgga ggctgagtgt aaggggtggc ggtgggggaa gtcgtacact cgaagctgga
     1141 ggggctcggt ccagtttcgc tggccgagtg ggggccaagc gccggcccca tccccgcgca
     1201 gccgccccgg acatgggccc tccggcaggc tccacgacaa ccgctccgcc cttcccctgg
     1261 gagcctgccg tcgaacccat gcccgtgtcg tctgctccac cccgcccgtt ctaattagag
     1321 cttgggcgat cccaccatcc ggcagctgga gatctcccac tcattcccgt ttttggcgaa
     1381 ctccgcgcgg aagaccgggc ggctggtcag gcgcccgcca aacgcgtctt tccacccgag
     1441 ttggaagctg aactccatcg ccgccgcctc ggtgccaagc tgtcgaggac catcgaccct
     1501 ctcacccacg acagctcccc actcctcagt tcggagaatg cgcgtcagct tgctcagctt
     1561 gcgttcgtcc gactttttcg ttggccggta cagctctgcg acgcgagcga cgttcttgga
     1621 acggagcgcg tcgtagcatt gctgcactcc ggtcaaaatg ctggcatcga gccgttgccg
     1681 ctccgcctca ggcttttcag gaagggtgac cgcaggttcg gctccggttt cttccggctc
     1741 ctcgggcggg ggctccgact catatccctg aaccgcgagc gtatcggcgg ggaggtccgc
     1801 cgggagcaca gtcacctgag atcttgcggc gttcgacccg ctcgtggcga taatggtcac
     1861 tgtgccggga gcatacgccc gcactcgtcc ggttagtgcg tcgacagcag cgagccgagg
     1921 ttcactcgag cgccacgcga ctgccgctcc agccagggga gcccctcttg catcgagtac
     1981 ggcggcagcc agcgtgacgg tgtcgccaac ccggagcgag ccgtgtggag cgatggacac
     2041 tgaggcggcc gcgggcggtt cagctgtggg gcgtcctacc acgatcgcca cgctgtcccg
     2101 ccactcgccg gccgccgcta ccaccagtgc gcggccggga cggactgcgc ggacccatcc
     2161 actcgccgag tcgacccgcg cgatgccgga atcggtcgag gaccatctca cagtggaacc
     2221 aggcaccgtc tgtccggcaa gatccctgac ctcggccagc aacctcgtgg aagcgccgga
     2281 cagcagcggt cggcgggggc cacgccggat ggtcacggaa gccggcgcac ccctgaggat
     2341 ggccgctacg ggttccgcgg gcgtcaattg gaaagccttc ccatccacag ccggcctcgt
     2401 tgtggacggc ttggaggtat tgggcagcat gtcccgcaac ccgccggaga gccaaagcac
     2461 cggtatcaga agaaggacgc ctacagaggc ggcgaggaac cgtcgctgac gggagcgaga
     2521 cgcccgccgg cgtctgatcg gacgatactc ttccaccgcg ggctcaaggg ctcgcggttt
     2581 gggtgagggt ggtctcgggc gtttcgtcgc gggcgccgcc tgctcgacgt tgatgctgac
     2641 cgcagcgctg gccccctcac aggtggcttt gagcacaacc gctccttggc ccaatgttgc
     2701 tacccagccg ctcgcggtga cgatcgccac gcttacatca ctggtgctcc actgcaccgt
     2761 gtggcccagg agaaagccac ctcggtagtc caggggtgtc gcggtcaggg caaaggagtc
     2821 gcccgctttc acggatttcg gtggggccga gatctggata gccgtgacac gcgcgtctgg
     2881 ctgcacctcg gcgtcgtccg ctagcggcgg agcgatttgc acctggagtc gcgctcggac
     2941 tccctcgcac gtggcggtga gccgagccgc gccgggtgcg accgcggtcg ccacccctgc
     3001 caggccatcg acgcggagaa cctcgggcgt gtcggtagcc cattgtaccg gtcgcccggg
     3061 cagcggcgtg ccccggtccc cccgcagcag ggccaccaac atgaagctgt cacccgtttc
     3121 gagagcagcc ggtggcggga gaatggagat ggtgcggacc agcccggctg gcgtcggggg
     3181 ccgcaccgat ctcgtgcgag gggtagccag cgttgggcgg cccggaagag aagtggtcca
     3241 gtcgggggtg gcgagtcggc agagctcggc aagcagcgga tcatcctccc cgagcggcgc
     3301 tgcgccaagt gccacctttg cttgagcgat gctgggccaa cgcgccgccg gatccttttc
     3361 taccatgcga agcaccgccg cctccagctc cggcggacat tccccacacc ggtcctggat
     3421 gggttgcggt ggctgctcca gatgagcctg catgaccgtc agagtcgacc cggtgaaagg
     3481 agaaatgccg gtgatcatct cgtacgcgac gaccccgagc gcgtactggt cggatgcccc
     3541 ggagacctcg gcgccgctgc actgctcggg gctcatatac gcgggcgtac caaccagcgc
     3601 accggggtgc gttgcactgg gcagctcggc caccttggcg atgccgaaat cggtgacgac
     3661 tgcgttgccg tcctcatcga tgaggatatt ggcgggcttg atgtcgcgat ggactactcc
     3721 agagcgatgc gcgtaggtaa gcgccgatcc cacctggaag agtatcgagc gcacgatcgg
     3781 aatcggtaac ctgccggcct gctggatcac ctgctcgagc gctcgaccgc ggatgtaccg
     3841 catcacgaag aaatgcaggc cccctgcctg ccgcaccgag tgcacggaaa cgatgttggg
     3901 gtgattcaga tgcgcgatgg tgatcgcttc ccgcttgaat cgctcggcca tcccttcgtc
     3961 catgagcagc ccgggcgaca tgactttgat cgcgaccttc cggtcaagcg agatctcatg
     4021 cgccaggaag accgccgcca tggcccctcg cccgagctcg cgtccgatct cgaactctcc
     4081 gagggtggca cgccgaaggc gctggaccac ttcgccccag gagcccaagt cgggctccgg
     4141 tgacgcattg acctcgagca tggaggtgga atcggcaggc gtgccgcaat tggggcagac
     4201 cccatcgtct tcgagcagag gctgcccgca agtcgcacag gagcgcaccc ccgccccgca
     4261 ggtcgggcag aagcggttcc caggtccgag gtcgccgccg cagccgagac aggtgaaagt
     4321 cgttgccata gcgccgtttc tgagatgatc agggtactgc tgaatattga agatcggcgg
     4381 accggggcgc aatgtcggag ccgagagtag gcctcccacc cgtacaggct agagctcagg
     4441 gaccgctttc cgatacttga ccaacgtgac gggtcactgc gcactagcgc gagcgctgac
     4501 aagcagatga cgccatttcg gc
//
LOCUS       DASYRV010000101         2635 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2722212, whole genome shotgun sequence.
ACCESSION   DASYRV010000101 DASYRV010000000
VERSION     DASYRV010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2635
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2722212"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            413..1732
                     /locus_tag="VGQ24_02515"
     CDS             413..1732
                     /locus_tag="VGQ24_02515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453735.1"
                     /translation="MPGWPLVLMYAGFPIWWILGLANIGFVIVAIPMAYQLLKRRTIA
                     TPRGFGVWLLFLVWAAAGVATLWADAPGAQPASGLGRLLPFGYRLLWYMAATIYLLYV
                     GNLDERDLPTRRIVRLLGWFFLVTVAGGYLGWVIPHLEFSSALELVLPQGVTSNEFVR
                     ILIHPGAAQIQNIIGYDSARPKAPFSYANDWGANYGMLVPFFILSWLRYPSKWRRRLF
                     PVVALAAIPPVIFSLNRGLWLGLIAMAGYAIIWVTVRGRLGAAATLVGAAVVVAGIVI
                     LSPLGHEVQERIANPHSNTGRAHLASLTVQSTLEGSPVIGFGAPRSVQGNFFSIAGGA
                     TPTCPQCSPPQLGTQGHLLLLVFAHGFFGALWFLGFVYYRFFRGLRDPSPDAMAYTAV
                     GVFFTAVIPVYDLVSAPLITVMLALGLLWRRERQAQTTDEMVAHDRP"
     gene            1719..>2635
                     /locus_tag="VGQ24_02520"
     CDS             1719..>2635
                     /locus_tag="VGQ24_02520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453736.1"
                     /translation="MTVREASGVEDWLGVLRLLWPGADISRGRPDPARSSGEAYVLLP
                     STRRPKVMAPLVPRGLAAEAVWRPTAADRPVESAARRLLAMAAGSRLGPVLFRGRVTI
                     RQDDSSDGSIVKHLTEIVREPVTVSVSLGSVRANRKAVLQVYTIDGRLIGYAKVGISD
                     LTAELVRAEAEALAGLARYSFREFRHPLPLWHGRWRGLEVLLVTALPRHAGRPSGPPA
                     AAMRELASHAGTTRAPVAESSWLRRLAERFESVTDDGQRRRLLGLHDTFTARHGSTTL
                     TFGAWHGDWGPWNMSWLDGISQVWDWERY"
BASE COUNT          407 a          882 c          845 g          501 t
ORIGIN      
        1 ggctccaacc aatccacgcg aatgtacagc cgcctagacg tgggttacgg gcacgattgc
       61 acctcggcgg gagaggctgg ggtcaagacc gagttgggcc ggaggcggga tccgcagaga
      121 cctggcgcga tcggggccgt gtcgaacccg gcattggccg cgtcgagccc agacccgcgc
      181 cgaacgtaag atcccggtta acgatccgat tcagaatgcg cggctacccc tggccaattc
      241 gcgcgggcga atgcttgctg gtcttacgca gtagcggcaa cggaggacgc tggtggcggg
      301 gagcgtgctg ttccgggcag cggctccacc gagccccgcg ccgcgaagcc gcctgcgccc
      361 ggcggtccgg cgatctctcc ggagggagct caagcgaccc gatctgcgcc tcatgcctgg
      421 ttggccgctg gtcctgatgt acgcgggctt ccccatctgg tggatcctgg ggctggcaaa
      481 catcggcttt gtgatcgtcg ccattcccat ggcgtaccaa ctcttgaagc gccggacaat
      541 cgcgaccccg cggggcttcg gcgtttggct gctctttctt gtgtgggcag ccgcgggcgt
      601 ggcgacgctg tgggccgacg caccgggggc gcagcccgcg tcgggactcg gacgcttact
      661 gccattcggc tatcgcctcc tctggtatat ggccgcgacg atctacttgc tttatgtcgg
      721 caatctggat gagcgagatc tcccaacccg ccggatagtt cggctgctcg gctggttctt
      781 cctcgttacc gtcgccggcg gctacttggg ctgggtaatc cctcacctcg agttcagctc
      841 cgctctggag ctggtgctgc ctcagggcgt gacgagcaat gagttcgtac gtatcctgat
      901 ccaccctggc gcagcccaaa tccagaacat catcggctat gactccgccc gccctaaagc
      961 accgttcagc tatgccaatg actggggcgc caattacggg atgctcgtac cgttctttat
     1021 cctgtcctgg cttcgttatc cgtcgaagtg gaggcgccgg cttttcccgg tagtggcact
     1081 cgccgcgatc ccaccagtca tcttctcgct caaccgggga ctctggctgg gtctgatcgc
     1141 catggccggc tacgcaatca tctgggtgac agtgcgaggc cggctcggcg cggcagctac
     1201 gctcgtcggc gccgccgtcg tggtggccgg gattgtcatc ctgagcccgc tcgggcatga
     1261 agtccaggaa cgtatagcca atccgcacag caacaccggc cgcgcgcacc tcgcatccct
     1321 cacggtgcag agcacgcttg aaggttcacc cgttatcggc ttcggcgccc cacgctccgt
     1381 gcagggcaat ttcttctcga tcgccggcgg agctacgccg acgtgccctc aatgctcgcc
     1441 accacagctc ggaacccagg gacatctcct gctgcttgtc ttcgcacacg gctttttcgg
     1501 tgccctgtgg ttcctcgggt tcgtctacta ccgattcttc aggggcctgc gcgacccctc
     1561 accggacgcg atggcttata ccgcagtcgg cgtcttcttt actgcggtaa ttccggtgta
     1621 cgaccttgtc agcgcgccgc ttatcactgt gatgctggcg ctcggcctgc tctggcgccg
     1681 agagcgacag gcgcaaacta ccgacgaaat ggtggctcat gaccgtccgt gaagccagcg
     1741 gagtggagga ctggctcggt gtgctgcggc tgctgtggcc gggcgccgac atcagccggg
     1801 gccgtcctga ccctgcaagg tcaagcggcg aagcttacgt cctcctgccc tcaacgcggc
     1861 ggccgaaggt gatggcgcca ctggtccccc gcggcctggc ggctgaggcg gtctggaggc
     1921 ccaccgccgc ggaccggcca gtggagtcag ccgcccgccg gttgctcgca atggcggcgg
     1981 gcagccggct ggggcctgtc ctcttccggg gtcgagtaac catccgccag gacgactcca
     2041 gcgacggctc aatcgtcaag cacctcaccg aaatcgtcag agagccggtg accgtttccg
     2101 tatcgctggg atcagtgcgc gcgaacagga aggcagtcct ccaggtctac accatcgatg
     2161 gcaggctcat cggctacgcc aaggtcggca tctcagacct cactgctgag ctggtccgcg
     2221 cagaggctga ggcgctggcc ggcctggcac gctactcctt tcgggaattc cgccatcctt
     2281 tgcccctgtg gcacggccgc tggcggggcc ttgaggttct cctcgtcact gcccttcccc
     2341 gccacgcggg acggccgagt ggaccaccgg ccgccgccat gcgggaactc gcctcccacg
     2401 ccggaacgac tcgggctccg gtggcagaga gttcgtggct gcgacgcctg gccgagcggt
     2461 tcgagtcagt cacagatgac ggccagcgtc gccgactgct cggtctgcac gacaccttca
     2521 ccgccaggca cggatcgaca acgctgacct tcggggcctg gcacggagac tgggggccct
     2581 ggaatatgtc ttggcttgac ggcatctcgc aggtatggga ctgggagcgg tacca
//
LOCUS       DASYRV010000102         4652 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_247634, whole genome shotgun sequence.
ACCESSION   DASYRV010000102 DASYRV010000000
VERSION     DASYRV010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4652
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_247634"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..516
                     /locus_tag="VGQ24_02525"
     CDS             <1..516
                     /locus_tag="VGQ24_02525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HEV8453737.1"
                     /translation="VAMRQKIGMVFQRPNPFPKSIYDNVAYGPRLNALVASHDLPALV
                     ERCLRQAALWDEVKDRLSAPATGLSGGQQQRLCIARALGNDPEILLMDEPCSALDPIA
                     TQRVEELIVELETKYTIVIVTHNMQQAARVSDVTGFFYQGELVEFGPSERIFTRPKEE
                     RTEAYITGRFG"
     gene            513..1199
                     /gene="phoU"
                     /locus_tag="VGQ24_02530"
     CDS             513..1199
                     /gene="phoU"
                     /locus_tag="VGQ24_02530"
                     /inference="COORDINATES: protein motif:HMM:TIGR02135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HEV8453738.1"
                     /translation="MSPETHRHFHDELSQVKVRLLTMSGEAETALRLAVEALLERNPE
                     KAKEVIAGDKVIDSMEVEIEEVCIDLLALQQPMARDLRMLVAAIKIANDLERVGDHAV
                     NLAQSAERLIEKRPIAPEPEIVEMARMARDMLADALEAFVRGDAVAGREVCMRDDKVD
                     ALNRSVFRILLTHMMEDPHSIGAGLELFLVSRNLERVADLATNIGEDVVFLVEGKSIK
                     HHAEDMIGHS"
     gene            1199..2773
                     /locus_tag="VGQ24_02535"
     CDS             1199..2773
                     /locus_tag="VGQ24_02535"
                     /inference="COORDINATES: protein motif:HMM:NF014587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA phosphatase family protein"
                     /protein_id="HEV8453739.1"
                     /translation="MRRSYLTALAAKAPVPGERLGAIDVGSNSIRLLVAEFDPQSGIN
                     VIDEVKDQPRLAAGLAESHRLDEFAMARAIQALTRMREVAERRGVRRIAAVATSAVRE
                     AENGKSFVDRVRREVGIPLKIIDTDAEAALSWRSVAHHFPLTSGRALVADIGGGSLEL
                     IGAVNGLIELNRSLPLGAVRLTEKYLFETKSRQREVERLRAKVYKQLKKAVRWREWSN
                     VMVVGSGGTFTNLGRMALARRGHGFEAVHGEIVKTAEVEQLLEWLCSLSVERRRSVPG
                     LNPQRADIILAGLAVTAELLKLVEARNLTVSAFGLREGLLLEMIGDSAPRTSDPLRAM
                     REFVDRCQVDRRHVEQVRVLALTLFDRLCDDLGADPEERPLLEAAALLHDVGQVVSYR
                     KHHRHSFQLILNAERLNLTSRDRYLVALISRYHRRKGPSRKHKEFTRLIPEEQAIVRR
                     LAGLLRVADGLDRGHTSAVERVATRLTKGKLTIRAVPKHRGADLELECWGATRKSDVL
                     AKELRRDIVVLPAVVG"
     gene            complement(2927..>4652)
                     /locus_tag="VGQ24_02540"
     CDS             complement(2927..>4652)
                     /locus_tag="VGQ24_02540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEV8453740.1"
                     /translation="GLAMTYNSSNELYSVNWGTGALDVAKSYRIEVWAAAFQTTAEKT
                     ALGFRPLLGWRDIQNSPSTANCDGTEAFCQVKYGRNIPVKARIQIGALCDPPGLRPCN
                     SATLEETVGGDVAISTDGGSTFSGVHQPGQPPGSQGQRTITVQQCLAGDLNPRATHLM
                     TVGSCITVSAIPVLTTDLTNPATVEVCDLAGDIISSGLSEEQEQRLTMHRLDGGVLRA
                     LPHVAGCAIVTGSTSPTFRSVLKEFARGNLGGGIGKLASLVGPAPLNARRRRINLGGG
                     GSPAYSDFGFALPCKMAPYAGNAQTGAVGALLPTEPAVLVTDLAGDPCPNTTVLFATA
                     DGTLAPTSDTTGPDGIAKAAWTLGPNVGAQSMTASGKGIAVVGNDGPRSIFDPFMAIQ
                     PFFNPANDPVPNPEQPVIVQTGVQSLTANGIIPFGSGGYSYKQVASSSASPANWQLTS
                     FNEAANGFTVGTGVAPFASSGTPCNYTPGTAWAKNTDILVRKTFTLASAATVQVRVAV
                     DRYAKQVYLNGVLLNPTTLSWNACAVPGAASNFILTGQGSAGSNLLTVRASARSQSAF
                     LDLRVAVP"
BASE COUNT          819 a         1410 c         1639 g          784 t
ORIGIN      
        1 gttgcgatgc gccagaagat cggaatggtc ttccagcgcc ccaacccgtt tcccaaatcg
       61 atctatgaca acgtggcgta tgggccgcgg ctcaatgcgc tggttgcctc acacgatctg
      121 ccggccctgg tcgaacgctg cctgcgccag gcggcgctct gggacgaagt gaaggaccgt
      181 ctctcggctc cggcaaccgg cctttcaggc ggccagcaac agcggctctg catcgcacgg
      241 gcgctcggca acgacccgga aatcctgctg atggacgagc cctgctccgc gctggatccg
      301 atcgccacgc agcgggtgga ggagctgatc gtcgagctcg agacgaagta caccatcgtc
      361 atcgtcaccc acaacatgca gcaggcggcg cgggtgtcgg acgtgaccgg tttcttctat
      421 cagggtgagc tggtggagtt cggtccgagc gaacgaatct tcacgcggcc aaaggaagag
      481 cggaccgaag cctatattac ggggagattc ggatgagccc ggaaacccac aggcattttc
      541 acgacgagct gagccaggtc aaggttcgcc tgctcaccat gagcggcgaa gccgagacgg
      601 cgttacgcct ggccgtcgag gccctgctcg agcgcaatcc ggagaaggcg aaggaggtca
      661 ttgccggcga caaggtgatc gacagcatgg aagtcgagat cgaggaggta tgcatcgatc
      721 tgctcgcttt gcagcagccg atggccagag atctgcgcat gttggtagcg gccatcaaga
      781 tcgccaatga cctggagcgg gtgggcgacc acgccgtcaa cctcgctcag tccgccgagc
      841 ggctcatcga gaagcgcccg attgcgccgg agccggaaat cgtggaaatg gcgcggatgg
      901 cgcgagatat gctggccgac gcgctggagg cattcgtgcg gggagatgcc gtggcggggc
      961 gcgaggtgtg catgcgggac gacaaggtag acgcgctcaa ccgctcggtg ttccggatcc
     1021 tgctgacgca catgatggaa gacccgcaca gcatcggggc cgggctggag cttttcctgg
     1081 tgagtcgcaa tctcgagcgg gtggccgacc tcgccactaa catcggcgag gacgtggtct
     1141 tcctggtcga gggcaagtcc atcaaacacc acgccgagga catgatcggg cactcctgat
     1201 gcgacgctct tatctcactg cgctggccgc caaggcacca gtgcccggcg agcggctggg
     1261 cgcgatcgac gtgggctcca attccatccg gctgctggtc gcggagttcg atccgcagag
     1321 cggcatcaat gtgatcgacg aagtgaagga tcagccccgg ctcgcggcgg ggctcgccga
     1381 atcgcaccgg ctggacgagt tcgcgatggc tcgggccatt caggcgctga cccggatgcg
     1441 tgaggtggct gagcgacgcg gcgtgcggcg gatcgccgcc gtggcgacct ccgcggtgcg
     1501 cgaggcggag aacggcaaaa gcttcgtgga ccgggtgcgc cgtgaagtgg ggattcccct
     1561 caagatcatt gataccgacg ccgaggcggc gctgtcctgg cgctcggtgg cgcatcattt
     1621 cccgctgacc tcgggtcgcg ctttggtggc cgacatcggg ggcggcagcc tggagctgat
     1681 cggggccgtc aacgggctga tcgagctcaa ccgctcgtta ccgctcggcg cggtacggct
     1741 caccgagaag tacctcttcg agaccaagtc ccggcagcgc gaagtcgagc ggctccgggc
     1801 caaagtgtac aaacagctca agaaggcggt gcgctggcgg gagtggagca acgtgatggt
     1861 ggtcggctcg ggaggaacct tcaccaacct gggccggatg gccctggcac ggcgggggca
     1921 tggcttcgag gcggtgcacg gcgagatcgt gaagaccgcc gaggtagagc agctcctgga
     1981 gtggctctgc tcactcagcg tggagcggcg gcggagcgtg ccgggactca acccgcagcg
     2041 ggcagacatc atcctcgcgg ggcttgccgt gacggcggag ctactcaagc tggtcgaggc
     2101 ccgcaacctg accgtgagcg ccttcgggct ccgcgaaggg ttgttgctcg agatgatcgg
     2161 cgacagcgcg ccacggacct cggatccgct ccgggccatg cgggaattcg tcgatcgctg
     2221 ccaggtggac cgccgtcacg tggaacaggt ccgggtgctc gcgctgaccc tgttcgaccg
     2281 gctgtgcgac gacctgggcg ccgacccgga ggagcgaccg ttgctcgagg cggctgccct
     2341 gcttcacgac gtggggcagg tggtgagcta ccggaagcac catcggcaca gcttccagct
     2401 cattctcaat gccgaacggc tcaatctgac ttcgcgcgac cggtatctcg tcgccctgat
     2461 cagccgctat caccgccgga agggtcccag ccggaagcac aaggagttca ccagactgat
     2521 accggaggaa caagcgattg tgcggcggct cgctgggctg ctgcgagtgg cggacggcct
     2581 cgaccgcggc cacacctccg cggtggagcg ggtggccacc cgacttacca agggaaaact
     2641 caccatccgc gcggtcccca agcatcgcgg agccgatctg gagctggaat gctggggcgc
     2701 gacgcggaaa tcggacgtgc tggcgaaaga gctgagaaga gatatcgtcg tcttacccgc
     2761 tgtagtgggg tgagaactgc aggtggcagg tggcaggtgg caggtggtag gtggcaggtg
     2821 gcaggtggca ggtggcaggt ggtaggttga aacgaagagg gcggtccgga tgggccgccc
     2881 ttttcgtgtc taggagtaac tgttcacagt ttacggttca ctgcttttac ggcacggcca
     2941 ccctgagatc gaggaacgcc gactgggacc gcgccgacgc ccgaacggtc agcagattgc
     3001 tgccggcgct gccctggccc gtgaggatga agttgctcgc ggcaccgggg acggcgcagg
     3061 cgttccacga gagcgtcgtc gggttcagga ggaccccgtt caagtagacc tgcttggcgt
     3121 agcgatcgac cgccacgcga acctggacgg ttgccgcgct ggccagggtg aaggtcttgc
     3181 ggaccaggat gtcggtattc ttggcccagg cggtgccggg cgtgtagttg cacggcgtgc
     3241 cgctcgaggc gaacggggcg accccggtcc cgacggtaaa cccatttgca gcttcattga
     3301 atgaagtcag ctgccagttg gcgggagagg cgctgctcga ggccacctgt ttatagctgt
     3361 agccgcccga gccgaagggg atgatcccgt tcgcggtcag gctttggacg cccgtctgga
     3421 cgatgacggg ttgttccgga ttgggaaccg ggtcgttggc cggattgaag aaaggctgaa
     3481 tggccatgaa gggatcgaag atcgagcgcg gtccgtcgtt gcccacgacg gctatgccct
     3541 tcccgcttgc cgtcatgctc tgcgcaccca cgttgggccc cagcgtccag gcggccttgg
     3601 cgatcccgtc ggggccggtg gtgtcgctgg tcggggcgag agtgccgtcc gcggtggcga
     3661 atagcaccgt ggtattgggg cagggatcgc cagcgaggtc ggtgacgagg acggccggct
     3721 cggttggcag aagcgcgccg acggccccgg tctgcgcgtt gccggcgtag ggcgccatct
     3781 tgcaggggag cgcgaacccg aagtcactat aggctggcga gccaccgcca cccaagttga
     3841 tccgccggcg gcgagcgttg agcggagcgg gacccaccag cgacgccagc tttccgatgc
     3901 cgcctcccag attcccacgg gcgaattcct tgagcacgct ccggaaggtc ggcgaggtcg
     3961 agcccgtgac gatggcgcaa cccgcgacgt gcggcagcgc gcgcaacaca ccgccgtcca
     4021 gccggtgcat ggtgagcctt tgctcctgct cctcggacaa gccgctgcta atgatgtccc
     4081 ctgccaaatc gcacacttcc acggtggcgg ggttagtgag gtcggtggtc agcaccggta
     4141 tcgcgctcac ggtaatgcag ctcccgacag tcatcagatg agtggcccgg ggattcaggt
     4201 cccctgccag gcactgctgc accgtgatgg tacgctggcc ctgcgagccc ggcggttggc
     4261 caggctggtg gaccccgctg aaggtgctcc ctccgtcggt cgagatggcg acatcgccgc
     4321 caaccgtctc ctccagggtg gccgagttgc aggggcgcag ccccggggga tcacacaggg
     4381 caccgatctg gatccgcgct ttgacgggta tattccggcc gtatttgact tggcagaagg
     4441 cctccgtgcc gtcgcaattg gccgtgcttg gcgagttttg gatgtcgcgc caacccaaga
     4501 gcgggcggaa accgagcgca gtcttctcgg cggtcgtctg gaaggcggcg gcccaaacct
     4561 cgatgcggta ggacttcgcc acatcgagcg ccccagttcc ccaattgacc gagtacagct
     4621 cattgctcga gttgtaggtc atcgcgagtc cg
//
LOCUS       DASYRV010000103         2325 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2928929, whole genome shotgun sequence.
ACCESSION   DASYRV010000103 DASYRV010000000
VERSION     DASYRV010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2325
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2928929"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            200..700
                     /locus_tag="VGQ24_02545"
     CDS             200..700
                     /locus_tag="VGQ24_02545"
                     /inference="COORDINATES: protein motif:HMM:NF039391.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6265 family protein"
                     /protein_id="HEV8453741.1"
                     /translation="MRTVFLLSTVLLLSSSSRPLPIRPEGTRPASPPSIRDLAWLEGI
                     WQGKIGEREFEARYSGADGGQVLSASKYAKDGMAAGFEFERFEELDGTLVLTPFPEGK
                     SSVTFKLAELEPRSRRVVFENLAHDFPTRLSYQRVADNKLTILVSGPGEDGKEQVLTY
                     SLTRKR"
     gene            complement(808..1596)
                     /locus_tag="VGQ24_02550"
     CDS             complement(808..1596)
                     /locus_tag="VGQ24_02550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453742.1"
                     /translation="MSPVIPWYVAPIVIVVAVTLTFWLYRLVARASESADLTPTSRAR
                     VRRATGLFLSLWLGLAFLLAPSTPAVDAAGRGIVPTTFLFFGGVTLVVAIGLLAFSPT
                     WRAVVDAVPADSLISAQLYRVIGGALFLPLYAIGTLPGYFALPAGWGDLAVGLLAPFV
                     ALAVRRQARGAQQLALGWNVFGFLDLAAAVGLGTGWLVALLQPDRGPVSTAAAMTFFP
                     LVLIPTFAVPLGFILHIYSIRRTLRSEAAVQRRSGGVRAAVGPA"
     gene            complement(1606..2085)
                     /locus_tag="VGQ24_02555"
     CDS             complement(1606..2085)
                     /locus_tag="VGQ24_02555"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HEV8453743.1"
                     /translation="MTRPTANPSPLSEGSAGCVCFHLRRSARTVTQFYDRMLAPTGLR
                     ATQFTLLTVVRRTGGLPFSSLADVLGMDRTTLTRNLRPLERDGLVTIEVGTDRRVRLV
                     RLTRGGEQKQAEAEPLWAKAHARITHGIGEKTWRTLQKDLSRTIAVGLQATAEQDHL"
BASE COUNT          463 a          720 c          776 g          366 t
ORIGIN      
        1 acaagccgat gatgaaaccg gaggacgtgc tggagctcta cccgaggccg atgtatatcc
       61 aataccaata gcccggccct catgggccgg aaggcgggga agcggggaag cggggaagga
      121 acggcaggga agtggggcag cgctagagcg gcagattctg tacggaagct gtccggacca
      181 tgaaggagag gagtgaagaa tgcgcactgt cttcttgctg tctacggtgc ttctcctttc
      241 ttcgtcatcg cgcccgcttc ccatccgccc agagggcacc cgccccgctt ccccgccttc
      301 catccgcgac ctcgcctggc tcgagggcat ctggcaagga aagatcggcg agcgcgagtt
      361 cgaggctcgc tacagcggcg ccgacggtgg gcaggtcctc agcgccagca agtacgccaa
      421 ggatgggatg gccgccgggt tcgagttcga gcgcttcgag gagctcgacg gcactctggt
      481 cctgacgccg ttccccgaag gtaagtcgtc ggtgaccttc aagctcgcgg agctggagcc
      541 gaggtcgcgg cgtgtggtat tcgagaacct ggcccacgac tttcccaccc gactcagcta
      601 ccagcgtgtc gcagacaata agctgacgat tttggtttcc ggcccgggcg aggacgggaa
      661 agagcaggtg ctgacgtact cgttgacgag gaagcgttag cgataactca gcgaaaacga
      721 tcctcagcct gaacgaagag agggatctac tccgcggttc cggtccgtgg gagcggatcc
      781 ctcgctgcac tcgggatgcg gatttcttta cgcagggccc acggctgccc tcactcctcc
      841 gctgcgccgt tgtaccgctg cctcactcct cagcgttctc ctgatcgagt agatgtgcaa
      901 gatgaaaccc agcggcaccg caaaagtcgg gatcaggacc agcgggaaga aggtcattgc
      961 ggctgcggtg gagaccgggc cgcgatcggg ctgcagcagt gcgacaagcc agccggtccc
     1021 cagtccgacc gcggcggcca gatcaaggaa cccgaacaca ttccaaccta gtgcgagctg
     1081 ctgcgcgcca cgggcttgcc ggcgcacggc tagcgcgacg aacggcgcca acaggccaac
     1141 agcgagatcc ccccaaccgg cgggaagggc gaagtagccg ggtagggttc cgatggcata
     1201 cagcggcagg aacagggctc ccccgatgac tcggtagagc tgcgccgaga tcagcgaatc
     1261 ggccggaacg gcatccacta ccgctcgcca ggtcggggag aaggcgagca gaccgatcgc
     1321 cactaccagc gtcaccccac caaaaaacag aaatgtcgta gggacgattc cccggcccgc
     1381 agcgtcaacc gcaggagtcg atggggcgag cagaaaggcg agtcccagcc agaggctgag
     1441 gaacaggccg gtggctcggc ggacgcgagc gcggctggtg ggtgtcaggt cggcggactc
     1501 ggacgcccgc gcgaccagac gatagagcca gaaggtgagt gtcaccgcaa caacaatgac
     1561 gatcggggcg acgtaccaag gaatgacggg cgacatataa cctcctcaga ggtggtcctg
     1621 ctccgcagtt gcctgaaggc cgaccgcgat ggtgcgactc aggtccttct ggagcgtcct
     1681 ccaggtcttt tcgccgatac cgtgggtaat ccgggcatga gctttagccc acagtggctc
     1741 tgcttccgcc tgcttctgct ctcccccgcg ggtcagtcgg actaggcgaa cccggcgatc
     1801 tgtgccgacc tcgatcgtca ccagcccatc tcgctccagt gggcggaggt tccgcgtgag
     1861 ggtcgtacga tccatgccga ggacgtcggc caggctggag aagggtaggc cgccggttcg
     1921 gcggactact gtaagcagag tgaactgggt ggctcgtagc ccggttggcg ccagcatgcg
     1981 gtcatagaac tgggtgacgg tgcgggcgga gcggcgcagg tgaaagcaga cgcagccggc
     2041 ggacccctcg gagagcgggg acgggttggc ggtgggcctg gtcacgatag atgtatatac
     2101 acctaccatc gacaagcgca aaccccccgg tcgatgcacc ccgagatcta cttttgggct
     2161 caccggggag gggacgaggc ctcacttggt gcagcggccg gaaggcttcc agtccgacgg
     2221 cgatccccac ccctggccgg catcgtgcac cacgaccacc agcgcatgcc gcaccacatt
     2281 gccggtggcc accagttgca tcggcgtgta ccctgcctgg gtcat
//
LOCUS       DASYRV010000104         8727 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1286044, whole genome shotgun sequence.
ACCESSION   DASYRV010000104 DASYRV010000000
VERSION     DASYRV010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8727
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1286044"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..620)
                     /gene="kdsB"
                     /locus_tag="VGQ24_02560"
     CDS             complement(<1..620)
                     /gene="kdsB"
                     /locus_tag="VGQ24_02560"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: protein motif:HMM:NF003952.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HEV8453744.1"
                     /translation="MRVLGVIPARLGSTRLPNKPLQPLAGEPLITRVIERVLDHGLVG
                     QLVVATDSEKVARVAEASGIRAVLTSASHATGTERVAEVAERAEFAGFDTIVNIQGDE
                     PFLSREALAGALARVEQGDEIGTAAAPLDFALAGDPSRVKVVTDARGRALYFSRALIP
                     YLREPGDPSDGLYWQHIGIYACSRTVLARWVSLPPSPAEQAERLEQ"
     gene            complement(716..1330)
                     /locus_tag="VGQ24_02565"
     CDS             complement(716..1330)
                     /locus_tag="VGQ24_02565"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEV8453745.1"
                     /translation="MLLVLDNYDSFTYNLVQYAGELGAEPVVYRNDALTPAEALALRP
                     AAIIISPGPCTPREAGISIPLVRAAAGMVPILGVCLGHQAIGEAFGGRVVRADRLMHG
                     KTTQVIHTGHPLFQGIPSPVEVMRYHSLVVSPREMPSELEITAWSEDRPAGQEIMALC
                     HHTLPVFGVQFHPESVATRQGKRLLANFLSLAGIGLHTVQPATV"
     gene            complement(1339..2073)
                     /locus_tag="VGQ24_02570"
     CDS             complement(1339..2073)
                     /locus_tag="VGQ24_02570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453746.1"
                     /translation="MRNYWVRIAFGALAIFTVGMIGITLARQGVGRVRGVVEGSGPIT
                     LPIPFVPFKLDGQKLGTLDKVVLLRDAPKRISAVELQIKLPDSVMARGLEGCRLAANF
                     DAQHNRRGVNVNVGPLSTGVFSCLQGKDSSAQLQEFGRAIFQPGGVSVPLLLPNDIVD
                     DLKQGNFGSGDEDSVASAAQARADSIAEAANARADSITAEVEARADSIAGRTERLVDS
                     LRTEGERRADSTRRAASRMADSARAR"
     gene            2179..2907
                     /locus_tag="VGQ24_02575"
     CDS             2179..2907
                     /locus_tag="VGQ24_02575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEV8453747.1"
                     /translation="MEGLQKLYGDFPAVQGLSFRVGPGEVLGLVGPNGAGKTTTIRSI
                     AGIIIPTAGRIRIAGHDLATDPVVAKAALAFIPDEPHLFEYLTVEEHLRFVGRLYRIG
                     DVGARIPGLLEELDLADKRGALPGELSRGMKQKLAIACGLLHDPRALLLDEPLTGLDP
                     VGIRRMKATIMRRAASGSAVILSSHLLHLVEEICTRVLVMHRGRTVAFGTIAEIVAGR
                     PELESQNLEDVFLALIGDEETAER"
     gene            2904..4628
                     /locus_tag="VGQ24_02580"
     CDS             2904..4628
                     /locus_tag="VGQ24_02580"
                     /inference="COORDINATES: protein motif:HMM:NF028272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative ABC exporter domain-containing protein"
                     /protein_id="HEV8453748.1"
                     /translation="MIRVFGYLAWRSARNRIARQLRHLRSPRYLAALLLGLGYIWFMI
                     IAQRPAAAAGEMPDPRTLELVGAVALIGAVAWGWIFGVERRVLVFTPAEVTFLFSGPV
                     SRRGLIQFKLLHSQLLILFNALLWTLILSRERFGVSSWLRVISIWVLLTTLSLHRLGA
                     SFVRTSLSEHGRLGARHRIVSLGVLGLVLIALTWSIADALPAIVAARGGNPREFLAAM
                     QDIASRPVPSALTYPFRALVRPLTAHSAADWLQALWPALLLLVLHYVWVIRSDSAFEE
                     TAVEVSLQRARALAEHRHRPSSALRAPTKASPPLFRLAPLGWPAGAILWKNLVAATRT
                     RRVRNVAITLGGAGVIVAVLSFDPEGTLTEIAGWLATSWAVITIVIGPQWVRNDLRGD
                     LLKLDLLRSYPLRGWSVVIAEVAASTLMLTAIQLNLLAIAYLAFLGKQTMTPDLQERS
                     LLLMAAVVYLPGINLLGMLIQNAAALLYPAWVRLGTGRPGGVEALGQNLLMMLAFVTL
                     LALTLALPVALAGGSFLLLRPLLEGWAALPATVLALGTMAFEAALIVEWLGGVFERTD
                     SAEAGIGL"
     gene            complement(4643..4807)
                     /locus_tag="VGQ24_02585"
     CDS             complement(4643..4807)
                     /locus_tag="VGQ24_02585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453749.1"
                     /translation="MSRSVDRDLDRLAAATESNWDEVKRSVNESVYSLQEAVRRQLPD
                     AKPMGGTGPG"
     gene            complement(4785..5042)
                     /locus_tag="VGQ24_02590"
     CDS             complement(4785..5042)
                     /locus_tag="VGQ24_02590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453750.1"
                     /translation="MRHMTYAAAAVLMSAALACSRRDRQETANRGDSVAEDVRNAARE
                     GADEVRDEAREARDYVYAQRNDFRRDIDLRLKGLDEQISRS"
     gene            complement(5207..5629)
                     /locus_tag="VGQ24_02595"
     CDS             complement(5207..5629)
                     /locus_tag="VGQ24_02595"
                     /inference="COORDINATES: protein motif:HMM:NF024759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEV8453751.1"
                     /translation="MVELSPAAQLRVMLHHEGTKDTKASVLALSYEVIGAAIEVHRIL
                     GPGLLESVYELALCKELWLRRIPVERQVNLPIHYKGRPLECSVKLDLLIQRSIIVEVK
                     SVDTISSIHKAQLLTYLHSKIFGWDFSSILMSKCCGME"
     gene            complement(5671..6591)
                     /gene="xerD"
                     /locus_tag="VGQ24_02600"
     CDS             complement(5671..6591)
                     /gene="xerD"
                     /locus_tag="VGQ24_02600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HEV8453752.1"
                     /translation="MTVPQLRTQIDRDFWLEGFRDFLALESGHSANTVESYLRDLRRL
                     GEFATSRGVRDPARLTRALLRDFVYLLKDLGLSAASIRRGVSAIRTYFGFLVGEGRVT
                     EDPSDRLESPRRGRTLPPTLSVLEMEKLLASPQVDEPLAWRDRALLELAYGAGLRVSE
                     LCGLGLTDLLLTENLVRIFGKGGKERLVPIGRSVIGAVSVYLHTKRPTLDRGKSKGRV
                     LLNARGEPLSRVGAWGVVKRATQRAGITKRVTPHTLRHSFATHLLEGGADLRAVQEML
                     GHADLSTTQIYTHVDREYLRSVHKQFHPRG"
     gene            complement(6588..7631)
                     /locus_tag="VGQ24_02605"
     CDS             complement(6588..7631)
                     /locus_tag="VGQ24_02605"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerB family tellurite resistance protein"
                     /protein_id="HEV8453753.1"
                     /translation="MSQLPPVAIYSVLALLAAVENVIPPVPSDAAVALGAFLSNRGVT
                     TPLGVFLVTWGANLAGAAAVYFVARRYGRDLFATSVGRRLLAPRSLAIIEREYLRFGV
                     VGIFVSRFLPGLRAVVPPFAGLVNLSPLRTLVPMGVASAIWYGGITVLGSVIGAEWDR
                     INRIILGVNRTLGVATLVLIVAAVIWYLLRRRRRQRERVWHATRDALDPAAPSFLEGS
                     DIAEGSARQSAALLVLELAYADPALTDADRELVVSHLRSRWGLSSQSAPPPEPEPERR
                     TRFEGYAGRLRSRFGQNQRLALVERMWTVAFSDGAIGHHEERLMHLAGELLGIGKNEL
                     VEVRERLGAPPVL"
     gene            complement(7652..8128)
                     /gene="ispF"
                     /locus_tag="VGQ24_02610"
     CDS             complement(7652..8128)
                     /gene="ispF"
                     /locus_tag="VGQ24_02610"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HEV8453754.1"
                     /translation="MIRVGIGYDSHRFEEGRPLVLGGIRIPHPRGLAGYSDADAVAHA
                     LIDAILGAAAAGDIGRHFPDTDPKWKGADSMELLRSAHELVRQHGYAVAQADLTIITE
                     QPRLGPHLAAMAAKLAERLGAPPGSVSLKAKSNEGMGFIGRGEGIAVIAVATLEAR"
     gene            complement(8125..>8727)
                     /locus_tag="VGQ24_02615"
     CDS             complement(8125..>8727)
                     /locus_tag="VGQ24_02615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehypoxanthine futalosine cyclase"
                     /protein_id="HEV8453755.1"
                     /translation="LRSAGLDSIPGGGGEILVDEIRERVARKKAQTKEWLGVQEEAHR
                     QGMKTSVTMMYGLGETNADRIEHLFRVRELQAQTGGFTAFICWPLQPEGTGMADQPKT
                     DAVAYLRTLAMGRIICSNVPNLQSSWVTMGLKVGQVALRFGANDFGSLMMEENVVSSA
                     GTTHRATIEEMERCIRDAGFTVRRRRQDYSIIDEPATVAA"
BASE COUNT         1511 a         2849 c         2802 g         1565 t
ORIGIN      
        1 aactgctcca gtcgttcggc ctgctccgcc gggctcggtg gcaggctcac ccagcgggcg
       61 agcacggtac ggctgcacgc gtaaatcccg atgtgctgcc aatacagacc atcgctcgga
      121 tcgccgggct cgcggagata cgggatgagt gcccgcgaga aatacagagc gcggcctcga
      181 gcatcggtga cgaccttcac ccggctcggg tcgccggcca gcgcgaagtc cagcggagcc
      241 gctgccgtgc cgatctcgtc cccctgctcc acccgggcca gcgcacccgc cagggcctcg
      301 cgcgaaagga acggctcgtc gccctggatg ttcacgatcg tatcgaagcc ggcgaactcg
      361 gctctctccg ccacctcggc cacgcgctcg gtgccggttg cgtgggacgc cgaggtgagg
      421 acggcgcgaa tccccgatgc ttcggcgacc ctggccacct tctccgagtc ggtggcaact
      481 acgagctgac cgaccagtcc atggtccagt acacgctcga tgacccgggt gatgagtggc
      541 tcacctgcca gcggctgaag cggtttgttg gggaggcggg ttgagccgag acgagccgga
      601 atcacaccca ggacgcgcat caccgaagct aacagggagg gggtccggag tcaaaagtta
      661 tgccgcgcga gccgggggct aggagcggag ggctaggcga ttgtacgtca aagagttaga
      721 cagtcgcggg ctgaacggta tggagaccga tcccggcgag agacaggaag tttgcgagca
      781 gccgtttccc ctggcgggta gccacggatt cggggtgaaa ttgcactccg aacaccggga
      841 gcgtgtggtg gcatagggcc atgatttcct gccccgcggg acggtcctcc gaccaggcgg
      901 taatctccag ctccgagggc atctctctcg gggagaccac gagcgagtga tagcgcatga
      961 cctccaccgg cgagggaatc ccctgaaaga gaggatggcc cgtgtgtatg acctgggttg
     1021 tcttcccgtg catgagtcgg tcggcacgca cgacccgtcc accgaatgcc tcgccgatcg
     1081 cctgatgccc gaggcatacg ccgaggatcg ggaccatgcc cgcagctgcg cggacgagtg
     1141 gaatcgagat gcccgcctca cgtggagtgc agggaccagg ggagatgatg atggccgccg
     1201 gccgaagcgc gagcgcctcg gccggcgtca gggcatcgtt gcggtagacg accggctctg
     1261 caccgagctc accggcgtac tgtaccaggt tgtaggtaaa gctatcgtag ttgtcgagga
     1321 cgaggagcat gccctactct agcgggcgcg cgccgagtcc gccatgcggc ttgccgcccg
     1381 gcgagtagaa tccgcccggc gctccccctc tgttcgcagc gagtccacca gccgttcggt
     1441 ccggcccgcg atggagtcgg cccgggcctc gacctccgcg gtgatggagt ccgcccgggc
     1501 gttcgccgct tcggcaatgg aatcggccct ggcttgcgct gcggacgcta cggagtcttc
     1561 atccccagag ccgaagttcc cttgcttgag gtcgtccacg atgtcgttgg gcagcagcaa
     1621 tggcacgctc acgcccccgg gctggaagat ggcacgccca aattcctgca gctgagcgct
     1681 ggaatccttg ccctggaggc aggagaacac gccggtcgag agggggccga cattgacgtt
     1741 gacgcctcgg cggttgtgct gggcgtcgaa gttggccgcg agtcgacatc cttccagccc
     1801 gcgagccatc actgaatccg ggagcttgat ctggagctcg acggccgaaa tgcgcttggg
     1861 cgcgtcacgc aggagcacca ccttatccag agtgccgagc ttctgtccat cgagcttgaa
     1921 gggaacaaat gggattggca acgtgatcgg gcccgatccc tcgaccacac cccgtacccg
     1981 gccgaccccc tgcctggcga gggtaatgcc gatcatgccg accgtgaaga tggctaatgc
     2041 cccgaaggcg attcgtaccc agtagtttcg catagattcc gccttcccgg acgccgggta
     2101 atatgtttcg ctaagtgacg ttcaggcaaa gccgaaagtt tcaccggctg actccggggg
     2161 accctgcccg tgatcgatgt ggagggcttg cagaagctat atggcgactt tcccgccgtc
     2221 caaggcctct cgtttcgggt ggggccgggc gaggtcctgg gcctggtggg gccgaacggt
     2281 gccggcaaga cgaccactat ccgcagcata gcggggatca tcattcccac cgccgggcga
     2341 attcgcatcg ccggccacga tctggcgact gatccggtgg tggccaaggc agcgctcgcg
     2401 ttcatcccgg atgagccgca cctgttcgag tatctgaccg tcgaggagca cctgcgcttc
     2461 gttggccggc tctatcgcat cggcgacgtc ggcgcccgga tccccgggtt gctggaggag
     2521 ctggacctgg ccgacaagcg gggcgcgctt cccggcgagc tatcccgagg aatgaagcag
     2581 aagctcgcca tcgcctgtgg cctgctgcat gaccctcggg ctctcctgct cgacgagccc
     2641 ttgaccggat tggatccggt ggggattcgc cgaatgaaag ccacgatcat gcgtcgagcg
     2701 gccagcggtt cggccgtgat cttaagctcg cacctgcttc atctggtcga ggagatctgt
     2761 acccgcgtgc tggtcatgca ccgcggtcgg accgtggcat tcgggaccat cgcggagatc
     2821 gtggccggaa gaccggagct tgagtcccaa aacctggagg atgtctttct cgcgctcatc
     2881 ggggatgaag agaccgccga acgatgattc gcgtgttcgg atatctcgcc tggcgctccg
     2941 cgcgcaaccg gattgcccgg cagctgcgcc atctgcgaag tccccggtac ctggctgcgc
     3001 tcctgctcgg cctagggtac atctggttca tgatcatcgc ccaacggccg gccgccgccg
     3061 ctggagagat gccggatcca cgaacactcg aactggtcgg ggctgtggcg ttgatcgggg
     3121 cggtggcatg gggctggatc ttcggcgtcg agcggagggt gctcgtattc acccctgcag
     3181 aagtcacctt tctcttctcg gggccggtgt cgcgacgggg cctgatccag ttcaagctgc
     3241 ttcacagcca gctcctcatc ctcttcaatg ccctgctctg gacgctgatc ctctcgcggg
     3301 agcgattcgg ggtctcctcc tggctcaggg tgatctcgat ctgggtcctg ctcactaccc
     3361 tgtcattgca caggttgggc gcctcgttcg tccggaccag cctctctgaa cacgggcggc
     3421 tcggcgcccg gcatcgcatc gtctcactgg gggtcctggg cctggtgctc atcgcactga
     3481 cctggagcat cgccgatgcg ctgcccgcca tcgtcgccgc gcgcggcgga aatccgcgcg
     3541 aattcctcgc ggccatgcag gatattgcca gcaggccggt gccgagcgcc ctcacctatc
     3601 ctttccgtgc cctggtgcgg ccgctcacgg cgcacagcgc ggccgattgg ctccaggcgc
     3661 tctggccggc acttctcctc ctggtcctgc attacgtctg ggttatccga tccgacagtg
     3721 cattcgagga gactgcagtc gaggtatcgc tgcagcgggc gcgcgcgctg gcggagcatc
     3781 ggcaccgccc ctcgtccgcc ttgcgggctc ccaccaaggc cagtcctccg ctttttcgcc
     3841 ttgcaccgtt gggatggccc gccggggcca tcctgtggaa gaacctcgtt gccgccaccc
     3901 gaacccgacg agtgagaaac gtggccatca cgctcggcgg ggccggggtc atcgtcgctg
     3961 tcctgtcatt tgatcccgag gggaccctga cggagattgc cggctggctg gccacgtcgt
     4021 gggccgtgat cacgatcgtg atcggacccc agtgggtgcg caatgatctc cggggagacc
     4081 tgttgaagct cgaccttctt cggagctatc ccctcagggg gtggtcggtc gtgatcgccg
     4141 aggtcgccgc gtccaccctg atgctcacgg ccatccagct gaatttgctt gccattgcgt
     4201 atctcgcgtt tctgggcaag cagacgatga cgccggatct gcaggagcgc tcattgctac
     4261 tcatggcagc ggtggtctac ctgccgggca tcaacctcct gggcatgctg attcagaatg
     4321 cggccgcgct gctctacccc gcctgggtcc gcctgggtac cggcagaccg ggtggggtgg
     4381 aggcgctggg tcagaatctt ctgatgatgc tggctttcgt gacgctgctc gcgcttaccc
     4441 tggctctgcc ggtggcactt gcgggaggct cattcctgct cttacggccg ctgctcgagg
     4501 ggtgggccgc cttgcccgcc acggttctcg cgctgggcac catggcgttc gaggcggctc
     4561 tgatcgtgga gtggctcgga ggcgtcttcg agcggaccga ttccgcagag gccgggatcg
     4621 gactctagat cctctcagtc tctcagcccg gcccggtgcc tcccatcggc ttggcgtcag
     4681 gcagctggcg gcggaccgcc tcctgcagcg aatacaccga ttcgttgacg ctgcgcttca
     4741 cctcgtccca gttactctcg gtggcagctg caagccgatc gagatcacga tcgactgatc
     4801 tgctcatcga gacccttgag ccgcaggtcg atatcgcggc ggaagtcgtt ccgctgggcg
     4861 tatacgtagt cgcgggcctc ccgcgcttcg tcgcggacct cgtcggcacc ttcacgggcg
     4921 gcattgcgaa cgtcttcggc gacggaatcc ccacgattcg cggtttcctg acgatcgcga
     4981 cggctacaag cgagcgcagc gctcatcagc accgccgcgg cggcataagt catgtgtctc
     5041 atgtcgtctc tcctgcaggg gtccgtctga atgcagttgg attgcgatgg cagaatagca
     5101 gaggaagagc cgcaaggagg tgacctggct cacgcgctta ctcaccacga aggcacgaag
     5161 gtcacgaagg acacgaagga tcacaatcac ccgttcaaga tgcgtctcac tccatcccgc
     5221 agcatttcga cattaaaatt gatgagaagt cccaaccaaa gatcttggag tggaggtagg
     5281 tcaggagctg cgccttatgg atgctgctga tggtgtcaac ggatttcact tcgacaatga
     5341 tgctgcgctg tatgagcaga tccagtttaa cgctgcattc caacggcctc cctttgtaat
     5401 gaattggtaa gttgacctga cgctccaccg gtatgcgccg aagccatagt tccttgcaga
     5461 gggccagttc atagactgac tcaagaaggc ccggcccaag tattcgatgt acttcgattg
     5521 cggcgccaat tacttcatat gacagcgcca ggacagaggc cttcgtgtcc ttcgtgcctt
     5581 cgtggtgaag catcacccga agctgagcag ccggactgag ctcgaccaac cgaatcgccg
     5641 caccacggat tcacttcacg ctgatcgatc tcagccccga gggtggaact gcttgtggac
     5701 cgagcggagg tattcccgat ccacgtgggt gtagatctgg gtcgttgaaa ggtcggcgtg
     5761 acccaacatc tcctggaccg cccgaaggtc cgctccaccc tcgagcagat gggtcgcgaa
     5821 gctgtggcga agggtgtgtg gtgtgactcg cttggtgatg ccggcccgct gggtcgctcg
     5881 cttcacgacc ccccaggcac caactcgcga gagcggctcc ccccgcgcat tgagaaggac
     5941 cctgcccttg ctcttccccc ggtccagcgt gggccgcttg gtgtggagat aaactgagac
     6001 ggccccaatc accgagcggc cgatcgggac cagccgctcc ttcccacctt tgccgaagat
     6061 ccggaccaga ttctccgtga gcagaagatc ggtcaatccg agaccgcaga gctcggagac
     6121 tcggagtccc gctccgtacg ccagctcgag cagtgcgcga tcccgccagg ccagcggctc
     6181 gtccacctgg ggcgacgcga gcagcttttc catctcgagt acgctcaagg tgggaggaag
     6241 agtgcgcccg cgtcggggac tctccagccg gtcgctcgga tcctccgtca cccggccttc
     6301 gccgaccaga aaaccgaaat aggtgcggat ggccgatacc ccgcgccgga tggaggcggc
     6361 actcagcccg agatccttca acaggtatac gaagtcgcgt agcagagcac gggtcaggcg
     6421 agccgggtct cggacaccgc gggaggtggc gaactctccc agcctgcgga ggtctcgaag
     6481 atacgattcc accgtgttgg cgctgtgccc cgactcgagc gccaggaaat cgcggaaccc
     6541 ctcgagccag aagtcccgat cgatctgggt gcgaagctgt gggacggtca caggaccggt
     6601 ggggccccga ggcgctctcg cacctccacg agctcgtttt tcccgatacc gagtagctcc
     6661 cccgccagat gcatcaggcg ctcctcatga tggccgatgg ccccgtcgct gaacgccacg
     6721 gtccacatcc gctccactag ggccagacgc tggttctgcc cgaaccggct ccggagccgg
     6781 ccggcatagc cctcgaagcg tgtgcgacgc tcgggctcgg gctcaggcgg aggcgcgctc
     6841 tgagagctca atccccatcg gctgcgcagg tgggagacga cgagctcccg atcagcatcg
     6901 gtcagtgcgg gatcggcgta ggcaagctcc aggaccagca gcgccgccga ttgccgggcc
     6961 gagccctccg caatatccga tccttccagg aatgagggtg ccgcggggtc gagcgcatct
     7021 cgagtcgcgt gccaaacccg ctcgcgctgc cgacgccgtc gccggagcag ataccagatg
     7081 accgccgcga caatcagtac cagggtagcg acgcccagag tgcggtttac ccctagaatg
     7141 attcgattga tccggtccca ttcggccccg atgaccgaac ccagcaccgt gatgccacca
     7201 taccagatgg ctgacgctac ccccatggga accagcgtcc gaagcgggct caggtttacc
     7261 aaccccgcaa aaggagggac cacagcccgg agccctggga gaaaacggct cacgaatatt
     7321 cccacgacgc cgaagcgcag atactcccgc tcgatgatgg ccaacgatcg cggcgccagc
     7381 agccggcgcc cgacggacgt ggcgaagaga tcacggccgt agcgccgggc cacgaagtag
     7441 accgcagccg ccccggccag gttggccccc caggtgacga ggaagacgcc gagtggagtg
     7501 gtcactccac ggttggacag gaatgcgccg agcgcgaccg cggcgtccga cggaaccggc
     7561 ggaatgacgt tctcgaccgc ggcaagcagg gcgagaacgc tgtatatggc gacgggcggc
     7621 agttgggaca cccacgccag cagggactcg atcagcgcgc ctccagggtg gcgactgcga
     7681 tcaccgcaat cccctcgccc cggccgatga atcccattcc ttcattggac ttggccttga
     7741 gactcaccga gcctggcggc gctcccaacc gctcggccag cttcgcggcc atggcggcaa
     7801 ggtggggacc cagccggggc tgttcggtga tgatggtgag atccgcctgc gccacggcat
     7861 atccatgctg ccggaccagc tcgtgcgcgc tgcgcaggag ttccatcgaa tcggcaccct
     7921 tccacttcgg atcggtgtcg ggaaaatgcc gtccgatgtc gccggcggcg gcggcgccca
     7981 ggatggcgtc aatgagcgcg tgggcgaccg catcggcgtc ggagtacccg gcaaggccgc
     8041 gggggtgggg gatcctgatt cctccgagca ccagcggacg accctcctcg aatcgatgcg
     8101 agtcgtagcc gatgccgact cgaatcatgc ggccacagtg gccggctcgt cgatgatgga
     8161 atagtcctgc cgccggcgac gcaccgtgaa gccggcgtcg cggatgcagc gctccatctc
     8221 ctcgatagtg gctcgatgcg tggtgcccgc cgaagagacg acgttctcct ccatcatcag
     8281 gctgccgaag tcgttggccc cgaaccggag ggccacctgc cccactttga gtcccatggt
     8341 gacccaggag gattggagat tcggcacgtt ggagcagatg atccggccca tggccaacgt
     8401 gcggaggtac gcgaccgcat cggtcttcgg ctggtccgcc atacccgtgc cttcgggttg
     8461 gagcggccaa cagatgaatg ccgtgaagcc gccggtttga gcctgcagct cgcgaacccg
     8521 gaagaggtgc tcgatccggt cggcattggt ctcgcccaac ccgtacatca tggtcaccga
     8581 cgtcttcatc ccctgccggt gcgcctcctc ctgcaccccc agccactctt tggtctgcgc
     8641 cttcttcctg gctacccgct cacggatctc gtctaccagg atttcgccac cgccaccggg
     8701 gatgctgtcc agcccggccg agcgcag
//
LOCUS       DASYRV010000105         2042 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_248838, whole genome shotgun sequence.
ACCESSION   DASYRV010000105 DASYRV010000000
VERSION     DASYRV010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_248838"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..468
                     /locus_tag="VGQ24_02620"
     CDS             <1..468
                     /locus_tag="VGQ24_02620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453756.1"
                     /translation="VTYPLTSIQAPLANGVTLVLGNFSTNAVLYSGSFSLNREINPRV
                     ALTGAGGHLGFVPRGRQPEAKIVLETTALTGSPFTAAGAFDPYKLEEVATGLAFSLRF
                     GTVQYNKWLLEFLQAQVIGSAPTVVNGVACTELTIRANTSTPVAADDIRITFD"
     gene            468..863
                     /locus_tag="VGQ24_02625"
     CDS             468..863
                     /locus_tag="VGQ24_02625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453757.1"
                     /translation="MSFNADAYLRARQPWELRLGNRAYRAAWISVEEVTAFLVAFQGN
                     NGTPPDAAGRLAATRTLLRRMFPWQLSYRWRDPVKQVMRLDDEARSAILADFFVWWKG
                     QRSGNSTNGTGSLSKTPPPTPATSDPASV"
     gene            899..1105
                     /locus_tag="VGQ24_02630"
     CDS             899..1105
                     /locus_tag="VGQ24_02630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453758.1"
                     /translation="MGWFHRPGFWPTADGVVPYRWFWHWVLAMPSAQAVERLEMASAV
                     GLAHADPKEARRAVEDHQRLIYGE"
     gene            1109..>2042
                     /locus_tag="VGQ24_02635"
     CDS             1109..>2042
                     /locus_tag="VGQ24_02635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453759.1"
                     /translation="MAENRIIQLILKAKDEATAVLSKAESGIDSFGRKATGVFKAVAA
                     LAVTAALGKFFADAVEEGAKAELGIARLGTAVRNAGGDFKALRPSLEEAIEGVRKLTT
                     YTDDDLRAALTNLITVTGDTSGSVKNLGVVADLAAFKQISLEEASLSVAKAMNGNVTQ
                     LNKLGIAGKDSNTVLENLRATVGGFAAGEATTFSGRLTQLNNEWGEFKEAVGTAIISS
                     GEAGGAVGKLTAVMVDLEHWVTANQASISAFVGGVVDLASWVGGQLADLFRGIQIFAV
                     DLALAWDTAGANLRGTLGRILMAFSEFLGQNRVLL"
BASE COUNT          333 a          690 c          676 g          343 t
ORIGIN      
        1 gtcacctacc cgctgacctc catccaggcg ccgctcgcca acggcgtgac cctggtgctc
       61 ggcaatttca gcaccaacgc cgtcctctat tccggcagct tctcgttgaa tcgcgagatc
      121 aatccgcggg tcgccttgac cggggctggc ggacatctcg gcttcgtgcc ccggggccgg
      181 cagccggaag ccaagatcgt gctggagacc actgccctga ccggttcgcc cttcaccgcg
      241 gccggcgcgt tcgatcccta caagctggag gaagtcgcca ccgggctggc cttcagcctc
      301 cggttcggca cggtccagta caacaagtgg ctcctggagt ttctgcaggc ccaggtcatc
      361 gggtcggcgc cgacggtcgt gaacggcgtc gcctgcaccg agctcacgat tcgggcgaac
      421 acctcgaccc cggtcgcggc ggacgacatc cgcatcacgt tcgactgatg tccttcaatg
      481 cggatgcgta tctccgcgcg cggcagccct gggagctccg gttagggaat cgcgcctatc
      541 gggcggcctg gatctcggtt gaggaggtga cagcctttct ggtggcgttc cagggcaaca
      601 atggcacgcc accggatgcc gccggccgcc tggccgccac ccggaccctg ctccgccgga
      661 tgttcccgtg gcaactgtcc taccgctggc gggatccggt caagcaggtc atgcgcctcg
      721 acgatgaggc gcgctcggcg atcctggccg attttttcgt gtggtggaag ggccagcgga
      781 gcgggaactc gacgaatggg accggctcgc tgagcaaaac accgcccccg acgcccgcga
      841 cgagcgaccc cgcctcagtc tgagtctcgc ggtcgtccac gcggtccggt tctacgggat
      901 gggctggttt caccggccgg gcttttggcc gaccgcggat ggggtggttc cctaccggtg
      961 gttctggcac tgggtcttgg ccatgccgtc ggcgcaagcg gtggagcggc tggaaatggc
     1021 ctcggcggtc ggcttggccc atgcggatcc caaggaagcc cggcgagccg ttgaggatca
     1081 tcaacgcctg atttacgggg agtgagacgt ggcggagaat cgcatcatcc agctcattct
     1141 caaagccaag gacgaggcca ccgccgtctt gtccaaggcg gaatccggca tcgactcctt
     1201 tggccggaag gccaccggcg tcttcaaggc ggtcgccgcg ctcgccgtca ccgccgcgct
     1261 gggcaaattc ttcgccgacg ccgtggagga aggtgcgaag gccgagctcg gcatcgcccg
     1321 actcgggacc gcggtccgta atgccggcgg cgacttcaag gcccttcgcc catccctcga
     1381 ggaggcgatc gagggcgtcc ggaagcttac cacctacacc gacgacgatc tccgcgcggc
     1441 cctcaccaac ctgatcaccg tcactgggga cacctccggc tcagtcaaga atctcggcgt
     1501 ggtggccgac ctggccgcgt tcaagcagat cagcctcgag gaagccagcc tctccgtcgc
     1561 caaggcgatg aacggcaacg tgacccagct caacaagctg ggcatcgcgg gcaaggactc
     1621 caacacggtc ctggaaaacc tgagggcgac cgtcggaggc tttgccgccg gcgaggcgac
     1681 gacgttcagc ggccggctca cccagctcaa caacgagtgg ggcgagttca aggaagcggt
     1741 cgggaccgcc atcatctcca gcggcgaggc cggtggcgcc gtcgggaagc tcaccgccgt
     1801 catggtcgac ctggagcact gggtcaccgc caaccaggcg tcgatcagcg cctttgtcgg
     1861 cggtgtggtc gacctggcga gctgggtcgg tgggcagctc gccgacctgt tccgcggcat
     1921 tcagatcttc gcggtcgatc tggcgctggc ctgggacacc gcgggagcca acctccgggg
     1981 gacgctgggc cggattctca tggcgttcag cgagttcctc ggccagaacc gcgtactgct
     2041 ca
//
LOCUS       DASYRV010000106         3427 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2118411, whole genome shotgun sequence.
ACCESSION   DASYRV010000106 DASYRV010000000
VERSION     DASYRV010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3427
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2118411"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1236)
                     /locus_tag="VGQ24_02640"
     CDS             complement(<1..1236)
                     /locus_tag="VGQ24_02640"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEV8453760.1"
                     /translation="METARLDEGLLRTTAPNGLVVLTERLPGVRSAAVGIYVRTASAH
                     ERPSQLGISHLLEHMVFKGTERRTARELALELEVRGGGLDAFTGRDYTSYQAHILDAD
                     LPLAVEILTDLVRRPLLRQTDLESERNVILEEINAVADTPDDLVFELHARALWPQHPY
                     GYSILGTRETLDALSAADLRALHQGGYYRGNCVIAAAGQVSHEQLLTVLEREGWFEGA
                     TREVPRGPVVPEPGVRGASVTEERDTAQTHIVFGTDTFPLRDPRRFPLAILTNVFGGG
                     MSSRLFQRVREELGLAYGVFAYKQFFQGSGQLGVYVGTQVATADQAIEAIREEYAKIA
                     REGLPLAELTNGKQQLKGQIMLSLESPAARMGRLAGFILHDDNYRPLDEMLAEIDRVT
                     PEEVAAVAGEFFAPDRQTVV"
     gene            complement(1244..3334)
                     /locus_tag="VGQ24_02645"
     CDS             complement(1244..3334)
                     /locus_tag="VGQ24_02645"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEV8453761.1"
                     /translation="MPVQRIETQFAGRPLMLETGRLARQAAGSTLVRYGDTMVLAAVT
                     VSTNVSTLPFFPLTVEYREKTYAAGKIPGGFLKREGRPSDKEILASRLIDRSIRPLFP
                     EGFKNEVQVFVTVLSADQENDADVLGIVAAASALGLSTVPWNGPLAAVRVGRVEGNWI
                     LNPTFQQLEFSSVDVVVSGSADSIVMVEGGSLEISEAEIIEALKVAQKGIREILGLQK
                     QLIDKAGPVQKIKWTKAEADPVLLAKVRQLAEEAMAQAINAKDKASRSSGVKVVKDQI
                     LQSLLLEHAERGRDISEELEEIEYRVMRKQVLERSERVDGRDLDTIRPIFVETGVLPR
                     THGSALFTRGQTQALVSATLGTADDEQRIDSIDVAGETTKSFMLHYNFPPYSTGEVKM
                     MRGTSRREIGHGALAERALQPLLPHYEDFPYTLRIVSEILESNGSSSMATVCGGSLAL
                     MDAGVPIKAACAGVAMGLIKEGDKVAILTDILGSEDHLGDMDFKVAGTEKGITSIQMD
                     IKILGLELKIMEQALERARKGRLHILKEMGKALPMPRTELSKYAPRIFTMQIKPDKIG
                     DVIGPKGKTIRGIQDATGAKISIEDTGVVTISAVGGEAGEKARAMVAAITTEPEVGRT
                     YEGPVKSTTAFGAFVEILPGVEGLLHISELQHGRTEKTEDVVKKGDIVQVKLLEVDDR
                     GRMKLSRKALLPRD"
BASE COUNT          558 a         1127 c         1082 g          660 t
ORIGIN      
        1 tacaaccgtc tgtcgatccg gggcgaagaa ctcgccggcg acggcagcga cctcctccgg
       61 cgtcacccga tcgatctccg ccagcatttc gtccagggga cggtagttgt catcgtgcag
      121 aatgaagccg gccagccgcc ccattcgggc agccggactc tcaagcgaga gcatgatctg
      181 tcccttgagc tgctgtttgc cgttggtcag ctccgccaag ggaagcccct cgcgggcgat
      241 tttggcgtac tcctcgcgga tggcctcgat cgcctggtcg gcggtggcga cctgggttcc
      301 gacatacacg ccgagctggc cggagccctg gaagaattgc ttgtaggcga acaccccgta
      361 ggccagtccc agctcttccc gtacccgctg gaagaggcgg ctcgacatcc cgcccccgaa
      421 cacattggtg aggatggcca gtggaaagcg ccgaggatcg cggagcggaa aggtgtcggt
      481 accgaagacg atgtgggtct gggccgtgtc ccgttcctcg gtgacgctgg cgccgcggac
      541 tccgggctcg ggcaccaccg gccctcgcgg cacctcccgg gtggcaccct cgaaccagcc
      601 ttcgcgctcg aggaccgtga gcagttgctc gtggctcacc tgccccgcgg cggcgatcac
      661 gcagttcccc cggtagtagc ccccctggtg caaggcgcgc aggtcggccg cggagagtgc
      721 atccaatgtt tcgcgggttc ccaggatcga gtagccgtag ggatgctgtg gccagagagc
      781 ccgggcatgg agctcgaaca cgagatcgtc cggtgtgtcg gcgaccgcgt tgatctcctc
      841 caggatcacg ttgcgctcgg actcgagatc ggtttggcgg aggagaggtc gacgcaccag
      901 gtcggtgaga atctcgacgg ccagaggtag atcagcgtcg agaatatggg cctggtagct
      961 ggtgtagtcg cggccggtga atgcgtcgag gccgccgcct cgcacctcca gctccagcgc
     1021 gagctcccgg gcggtgcggc gctcagtccc cttgaagacc atgtgttcga ggaggtggga
     1081 gatcccgagc tggctgggcc gctcatgcgc gctggcggtc cgcacgtaga tgccaacggc
     1141 tgccgagcgc acgcccggca gccgttccgt caggaccacc agcccgttcg gcgccgtggt
     1201 cctgagcaac ccctcgtcga gtcgagccgt ttccacgacg aagctagtcc ctgggcagca
     1261 acgccttccg ggagagtttc atgcggccgc ggtcgtccac ctcgagcagt ttgacctgaa
     1321 cgatgtctcc cttcttcacc acgtcctcgg tcttctcggt gcggccgtgc tgcagctcgc
     1381 tgatgtgaag cagcccttcg actccgggca ggatttccac gaaggcgccg aaggcggtgg
     1441 tgctcttgac cggaccctcg tacgtccgcc ctacttccgg ttccgtcgtg attgccgcga
     1501 ccatggcgcg cgccttctcc ccggcctcgc cacctacggc ggagatcgtg accacgccgg
     1561 tgtcctcaat gctgatcttg gcaccggtcg cgtcctgaat gccgcggatg gtcttgccct
     1621 tgggaccgat gacgtcgccg atcttgtcgg gtttgatctg catggtgaag atgcggggcg
     1681 cgtacttcga cagctcggtg cgtggcatcg gcaacgcctt gcccatctcc ttgaggatgt
     1741 gcagacgacc cttccgggcc cgctccagcg cctgctccat gatcttgagc tcgaggccca
     1801 ggatcttgat gtccatctgg atcgaggtga tgcccttctc ggtgccggcc accttgaagt
     1861 ccatgtcgcc caagtggtcc tctgacccga gaatgtcggt gaggatcgcc accttgtcgc
     1921 cttccttgat caagcccatg gcgacgccgg cacaggcggc cttgatcggc acgcccgcat
     1981 ccatcagggc cagcgagccc ccgcagaccg tggccatcga agacgagccg ttcgactcca
     2041 ggatttcgga gacaatgcgc agggtgtagg ggaagtcctc atagtgcgga agaagcggct
     2101 gcaaggcccg ctccgccaag gcaccgtgac cgatctcccg gcggctggtg ccgcgcatca
     2161 tcttgacctc gccggtggag tacggcggga agttatagtg cagcatgaat gacttggtcg
     2221 tctcaccggc cacgtcaatg ctgtcgatcc gctgctcgtc gtcggcggta ccgagcgtcg
     2281 cggagaccag agcctgagtc tgacctctgg tgaacagcgc cgagccatgg gtgcggggca
     2341 gcacgccggt ctcgacgaag atcggcctga tagtgtcgag gtcccggcca tcgacccgct
     2401 ccgagcgctc caggacctgc ttccgcatga cgcggtactc gatctcctcc agctcctcgc
     2461 tgatgtcgcg tccccgctcc gcgtgctcga ggagcaggct ttgaagaatc tggtccttaa
     2521 ccaccttcac gcccgaggag cgactcgcct tgtccttggc gttgatagcc tgggccatgg
     2581 cctcttcggc aagctgccgc accttggcca acaacaccgg atcagcctcg gccttggtcc
     2641 acttgatctt ctgaaccggc ccggccttgt cgatcaactg cttctggagg ccgagaatct
     2701 cgcgaattcc cttctgcgcc accttcaacg cctcgatgat ctcggcctcg gagatttcga
     2761 gcgagccgcc ctcgaccatc acgatcgagt ccgctgaccc gctcactacc acatcgacgc
     2821 tggagaactc gagctgctgg aaggtcgggt tcaggatcca gtttccttcc acccggccga
     2881 ctcgtaccgc cgccagcggg ccgttccagg gcaccgtcga gaggccgagt gcactggcgg
     2941 ccgcaactat gcccagaacg tcggcatcgt tttcctggtc cgccgacagc acggtgacaa
     3001 atacctgcac ctcgttcttg aacccctccg gaaagagcgg ccggatggac cggtcgatca
     3061 accggctggc cagaatctct ttgtcggatg gccggccttc acgcttgagg aacccacccg
     3121 ggatcttccc ggcggcatag gtcttctcgc ggtattcgac agtgaggggg aaaaacggga
     3181 gggtcgagac gttggtggaa acggttactg ctgcgagcac catcgtgtcg ccatagcgga
     3241 cgagggtgga accggcggcc tgccttgcca gtcggcccgt ctccagcatg agcgggcgtc
     3301 cggcgaactg agtttcgatc cgttgtacgg gcacagtctt ctctctctct cggggcttct
     3361 ttgcttcgag tctagggtcc aaggtctagg tctaggtcgc gcaagcgtct cagtcggctg
     3421 tagactc
//
LOCUS       DASYRV010000107         4217 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_41998, whole genome shotgun sequence.
ACCESSION   DASYRV010000107 DASYRV010000000
VERSION     DASYRV010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4217
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41998"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..357)
                     /locus_tag="VGQ24_02650"
     CDS             complement(<1..357)
                     /locus_tag="VGQ24_02650"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEV8453762.1"
                     /translation="MKRFYVVFGAVAVIGLGALAYLTSRPQAVSIPANVTIQPSDTSG
                     FRGYLKGSPNAPVEITEFADYQCPFCQTFATLQMPTIEERLIQTGRLRWRYRDFPLQQ
                     HSFARLAAHSAACADEQ"
     gene            complement(354..659)
                     /locus_tag="VGQ24_02655"
     CDS             complement(354..659)
                     /locus_tag="VGQ24_02655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453763.1"
                     /translation="MAEHDEVYGQERAERLAALLRSLAARIQELDRKGQLLGGGPELL
                     RMMGDARSELFHYEVRSTYDTPEVADNRRIVEEAQRQDSFLPDEPEDDEPWRPTRPE"
     gene            840..1097
                     /locus_tag="VGQ24_02660"
     CDS             840..1097
                     /locus_tag="VGQ24_02660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453764.1"
                     /translation="MTKKKTRSTPEAASFAQARDELFSHILRCGVIDALPEHQKDWFD
                     DTMGYVADRYEDLSKEELAQLRMLAERYCQPVRRLMESGAA"
     gene            complement(1146..1613)
                     /locus_tag="VGQ24_02665"
     CDS             complement(1146..1613)
                     /locus_tag="VGQ24_02665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453765.1"
                     /translation="MHSPWAELLVAAFAAMSATPGNTQQIGEIGIQGIVTSSEPALIV
                     VGPYSGLRISGRTRISASVGGGASDGDFAWRAEALGHFLLSPDRLRGWGVYVAGGLAA
                     VGGSVDRGYIVLTVGAEGRPGGSSGWVTEVGIGGGVRIGLGYRWRRFPRTWRK"
     gene            complement(1594..2004)
                     /locus_tag="VGQ24_02670"
     CDS             complement(1594..2004)
                     /locus_tag="VGQ24_02670"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEV8453766.1"
                     /translation="MARETKHATLIWQQGLRFTASDSGGPGITVDGDNVMGPGPMLTL
                     LLAAAACSGSDVVLILEKMRVKLHELRIEIAGTRREEEPRRYVAIHLDYHLGGEGIDE
                     VKARRAIDLSLEKYCSVIHSLAPDIAVTYALSLG"
     gene            complement(2006..2560)
                     /locus_tag="VGQ24_02675"
     CDS             complement(2006..2560)
                     /locus_tag="VGQ24_02675"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEV8453767.1"
                     /translation="MSEASSGRRGEQGRARWTPADLVSLVRIPLAVAFILAPDSNWRL
                     GVLAASVASDLLDGPVARRFGSSALGPLVDPIADKLFMACAFGVVAFSGKLELYEIAA
                     VLLRDMVATVAFVTTFLSRRPRAIPARPGGKAVTVAQVLTLVAFLLDSPLLRPMAWAT
                     GAIAIYAIWDYYRVAPKAERRVGE"
     gene            2644..3417
                     /locus_tag="VGQ24_02680"
     CDS             2644..3417
                     /locus_tag="VGQ24_02680"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HEV8453768.1"
                     /translation="MILDTAVIPCGGLGTRLHPITRWLPKEVLPVGLKPVLYWTLDEA
                     ADAGLLRAIIITNPHKPILEAVARNYQGPLELEFVPQDHPRGLGDAFLRARDQLGGSS
                     FVALLPDNLFQGTNPTAALISTYRKTGLTTVLLAEVERNDAGSKGATGRAAVRKEPDG
                     SLRVTAIADKGVGRFDTAGDQVAVTPIGRMAFSGDILAEFDEVGRSLGPGVELDDVPV
                     LQRLARREALAGVISSAKFFDVGVPEGYREAVAAFPARA"
     gene            3433..3732
                     /locus_tag="VGQ24_02685"
     CDS             3433..3732
                     /locus_tag="VGQ24_02685"
                     /EC_number="4.1.1.50"
                     /inference="COORDINATES: protein motif:HMM:NF014705.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004014 - adenosylmethionine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine decarboxylase"
                     /protein_id="HEV8453769.1"
                     /translation="MSFNHQLLELTSVDPARLRDAAALSALVVSAAGAVGMPSLGPPV
                     VREGAGAIAVALLCLEGHIVLHGAPAEGVCLVEIIARAPADVSKGISVISRRLGS"
     gene            complement(3710..>4217)
                     /locus_tag="VGQ24_02690"
     CDS             complement(3710..>4217)
                     /locus_tag="VGQ24_02690"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEV8453770.1"
                     /translation="SRRDPERIAAEVWAAVASGLGGRMFEALRDRRSLAYTVLASSWQ
                     RGRAGALVTYIATSPEREAEARAAMLDELERFTQTPVSEAELRQAVNYLSGQAEVGRQ
                     SGGALAGEILEAWVIGNGLGDLENPGAAFRAVTADDVSRVAQRYLRRSQRAEGVVRGT
                     GLSSRAGG"
BASE COUNT          745 a         1423 c         1322 g          727 t
ORIGIN      
        1 ctgttcgtcg gcgcaggccg cggagtgcgc cgccaaccgg gcgaacgaat gctgttgcaa
       61 gggaaagtct cggtagcgcc aacggagtcg ccccgtttgg atcaggcgct cttcgatggt
      121 gggcatctgc agggtggcaa aggtttggca gaagggacac tggtagtccg cgaactcggt
      181 gatctcgact ggagcgttgg gcgatccttt caggtagccg cgaaaaccgg aggtgtccga
      241 aggctggatc gtgacgttgg ccggaatact gaccgcttgg ggccgggatg tcagatacgc
      301 gagtgctccg agtccgatca cggccacggc gccgaatact acgtagaagc gcttcattcc
      361 ggcctggttg gccgccatgg ttcgtcgtcc tctggttcgt ccggcaaaaa ggaatcctgc
      421 cgttgggcct cttccacgat gcggcgattg tccgccactt ccggcgtgtc gtaggtcgaa
      481 cggacctcgt agtggaacag ctcgctgcgc gcatctccca tcatgcgcag cagttccggc
      541 ccgccgccga gcagctggcc tttgcggtcg agctcctgga tgcgggcggc cagcgaccgc
      601 aggagcgccg cgagccgctc cgcccgctcc tgcccataca cctcgtcatg ctcagccata
      661 gatacctcga gggcgacgct tcgccctcgg tcaagttcat gtttttccgg ccgataaaga
      721 taacgagtcg gaggacggga gctatgagtc tggctgcttt gcaccaaatg gtgcaaccgg
      781 ttataattcg ctgcagcgag agctgggaat ccgtgatttg aacgcccaaa ggatggtgca
      841 tgactaaaaa gaagacccgc agtacccctg aggcggcttc gttcgcccag gcccgcgatg
      901 agttgttcag ccacatactc cgctgcggcg tgatcgacgc cctaccggag caccagaagg
      961 attggttcga cgataccatg ggttatgtcg cagatcggta cgaagatctg agcaaggagg
     1021 agctggcaca gctccggatg ttggctgagc gctattgcca gccggttcgc cggctcatgg
     1081 agtcgggcgc ggcctgagca acctcaagaa acgaaaacgc cccgggaagc cctcctgggg
     1141 cgttgttatt tgcgccaggt tcgggggaac cgtcgccagc gataccccag accgatcctg
     1201 acccccccgc cgataccaac ctccgtaacc cagccggatg agcccccggg gcgtccctcg
     1261 gccccaacgg tgagcacgat gtagccccga tcgaccgacc cacctacggc cgcgagtcca
     1321 ccggcaacgt agactcccca cccgcgcagc cggtccgggc tgagcagaaa gtgccccaag
     1381 gcttccgccc gccaggcaaa atcaccgtcc gaagcacccc cacccactga ggccgagatg
     1441 cgggtccgtc ccgagatgcg gagcccgcta taaggcccaa cgactatcaa cgccggttcg
     1501 gacgatgtca cgatcccctg aataccgatt tcgccgatct gctgtgtgtt tcctggagtc
     1561 gcgctcatag ccgcgaaggc ggccacgagc agctcagccc agggagagtg catacgtgac
     1621 ggcaatatcg ggcgcgagtg aatggatcac cgagcagtat ttctccagcg agagatcgat
     1681 ggctcggcgc gccttcacct cgtcgatccc ctcgccaccc aggtgatagt ccagatggat
     1741 ggccacgtag cgccggggct cctcctcacg ccgggtcccg gcgatctcga tgcgaagctc
     1801 gtgaagcttg acccgcatct tctccaggat cagcaccaca tcggacccgc tgcaggccgc
     1861 cgccgcgagc agcagtgtga gcatcgggcc cgggcccatg acattgtcac catccaccgt
     1921 gatgcctggt ccgccggagt cgctggcggt aaagcggagg ccctgctgcc agatcaatgt
     1981 ggcgtgcttg gtctctcgtg ccatgctact cgcccaccct tcgctctgcc ttcggcgcta
     2041 ctcggtagta gtcccagatg gcgtagatgg cgatcgctcc ggttgcccag gccatcgggc
     2101 ggagcagagg cgaatcgagt agaaacgcga ccagcgtgag tacctgtgcc accgtcacgg
     2161 cctttccccc cggccgggcc ggaatggcgc gcggccgacg ggagaggaag gtggtaacga
     2221 aggcaaccgt cgccaccata tcccgcagga ggacggccgc aatctcgtac agctccagct
     2281 ttccggagaa cgccaccaca ccgaaggcac acgccatgaa cagcttgtcg gcgatcggat
     2341 cgaccagcgg gcccaaagcc gagctgccga accgccgtgc gaccggaccg tcgagcaggt
     2401 cgctggcgac cgaggctgcc aggacgccga gccgccagtt ggagtccggc gcaagaatga
     2461 atgcgacggc caacgggatc cgtaccaggc tgaccaggtc ggccggcgtc cagcgcgcgc
     2521 ggccttgctc gcccctccga ccagaactag cttcggacac gctgctcccc ccgcgaacgt
     2581 gagcgtacaa gatacccagg tccgtggcct gcccccgctt ccgttggtga cctcgatccc
     2641 atcatgatcc tcgacacggc ggtgattccg tgcggggggc ttggtacccg gttgcacccg
     2701 attacccgct ggttgccgaa ggaggtgctt ccagtagggc tgaagccggt tctctactgg
     2761 accctggatg aggcggccga tgccggcctg ctacgggcca tcatcattac caacccgcac
     2821 aaaccgattc tcgaggcggt ggcccggaat taccagggcc cgctcgagct cgagttcgtg
     2881 ccgcaggatc atccccgcgg tctgggtgac gcgttcctcc gggcccgcga tcaactcggc
     2941 ggatcgtcat tcgtcgcact ccttcccgat aaccttttcc agggaaccaa cccgactgcc
     3001 gcattgatct ctacctatcg gaaaacgggc cttaccaccg tcctcctggc ggaggttgag
     3061 cgaaatgatg ccggctcgaa gggcgcaacc ggccgggccg ccgttcgcaa ggagccggac
     3121 ggcagtcttc gggtcacggc tattgctgac aagggggtcg gccgcttcga caccgcgggt
     3181 gaccaggtgg cggtcacgcc gatcggccga atggccttct ccggcgacat cctcgccgag
     3241 ttcgacgaag tgggacgcag ccttggaccc ggtgtggagc tcgacgatgt ccccgtgctg
     3301 cagcgcctgg cccgccggga agcgctggcc ggggtgatca gctcagccaa gttcttcgat
     3361 gtcggagttc cggaaggcta tcgggaagca gtggcggcat ttcctgcccg ggcctgattc
     3421 agagggtcgc ccatgagctt taatcaccag ctgctcgagc tcacctcggt ggatcccgcc
     3481 cgactacggg atgctgccgc gctctcggcc ctggtggtgt cggcggcggg agcggtcggg
     3541 atgccttcgc taggaccacc ggtggtgcgc gagggagccg gggccatcgc cgtcgccctc
     3601 ctatgcctcg agggccacat cgttctccac ggcgcgccgg cggaaggagt ctgcctcgtg
     3661 gagatcatcg cacgtgcccc cgccgacgtc agcaagggaa tcagcgtgat cagccgccgg
     3721 ctcgggagct gagtccggtt ccgcgtacca ccccctccgc tcgctgcgag cgccgcagat
     3781 agcgctgtgc aactcgagac acgtcatccg cagtcaccgc acgaaaggca gcgcccgggt
     3841 tctccaggtc gccgagcccg ttcccgatca cccatgcctc gagaatttct ccggccagtg
     3901 ccccaccact ctgccgcccg acctccgcct ggcccgacaa atagttcacg gcttgtctca
     3961 gctcggcttc gctgaccggc gtctgggtga atcgctccaa ctcgtccagc atcgctgccc
     4021 gtgcctctgc ttcgcgttcg ggtgaggtgg cgatgtacgt caccagcgct cccgcacgac
     4081 ctcgctgcca gctcgacgcg aggaccgtat acgccagtga gcgccggtcg cgcagagctt
     4141 caaacatccg cccgcccagc ccgctggcga cggctgccca tacctcagcc gcgatgcgct
     4201 cggggtcgcg ccggctc
//
LOCUS       DASYRV010000108         1993 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2929673, whole genome shotgun sequence.
ACCESSION   DASYRV010000108 DASYRV010000000
VERSION     DASYRV010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1993)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1993)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1993
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2929673"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..549)
                     /locus_tag="VGQ24_02695"
     CDS             complement(<1..549)
                     /locus_tag="VGQ24_02695"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEV8453771.1"
                     /translation="MQNFVYLVGDREAGECVAVDPAWEIDAIVRAADADEMTIKGALI
                     THTHPDHVGGHLFGLDIPGVEDLLERLPDARVYVHTAEREFLRGFGSNLVRVEAGTEL
                     PLGRLTITFIHTPGHTPGSQCFYVDGRLISGDTLFIGACGRTDLPGGDPTELHRSLTQ
                     RLAKLPDETVLFPGHNYGGPSST"
     gene            complement(598..807)
                     /locus_tag="VGQ24_02700"
     CDS             complement(598..807)
                     /locus_tag="VGQ24_02700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453772.1"
                     /translation="MEFIELRDVEKAEESTLVEAPTISPEGKATGGILTNARSGKSFE
                     FVGFLDQSYHAVVEFTGLVLGNSKE"
     gene            complement(1381..>1993)
                     /locus_tag="VGQ24_02705"
     CDS             complement(1381..>1993)
                     /locus_tag="VGQ24_02705"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEV8453773.1"
                     /translation="AFCAGGDMSLIEGNTRRPVQESRQVMLDYYDRYLSLMRLPIPTL
                     AAVHGYAIGGGLALALACDLRYAAEDARLGVNFARLGIHPGMASTLTLPRAVGLARAL
                     ELFYTGRLVSGREAEALGLVNRAVPRAELMPTVLEVARAISRNAPLVVRMLKRAVHRA
                     AEGALTGALEYEAFCQAISYTTTDLKEGVAAIRERREPRFTGR"
BASE COUNT          359 a          648 c          618 g          368 t
ORIGIN      
        1 cgtggaggac ggtcccccgt agttgtggcc ggggaagagc accgtctcgt cggggagctt
       61 ggccagccgc tgggtcaggc tccggtgcag ctcggtcgga tcgcccccgg gcaggtcggt
      121 gcggccgcag gcgccgatga acagcgtgtc ccccgagatg aggcggccgt ccacgtagaa
      181 gcactgggac cccggggtgt ggccgggggt gtggatgaag gtgatggtca gccgccccag
      241 cggcagctcc gttcccgcct cgaccctgac cagattcgag ccgaagccgc ggaggaactc
      301 gcgctcggcc gtgtggacgt agacgcgagc gtcaggaagc cgctcgagca gatcctcgac
      361 gccggggatg tccaggccga agagatgacc gcccacgtgg tcggggtgcg tgtgggtgat
      421 gagcgcgccc ttgatcgtca tctcatcggc gtcggcggcg cgcacgatgg cgtcgatctc
      481 ccaggccggg tccaccgcca cgcactcgcc cgcctcgcgg tcgcccacca ggtagacaaa
      541 gttttgcatc ggacccagtt ccatctgttt cagatacatc gccacgtgag tcagcctcta
      601 ttccttacta tttccgagca ctaggcccgt gaactcgact accgcgtggt agctctgatc
      661 gaggaaacca acaaactcga acgatttgcc tgatctcgcg ttcgtaagaa tgcctccagt
      721 tgccttcccc tcgggtgaga tcgttggtgc ttcgaccagg gtggactcct ctgccttctc
      781 aacatctcta agttcaatga attccaaaag caattgctcc aagcgttcca ctccacttag
      841 cagggctccg tccccccccc ggcctaatac gaatctgccg cttgagattc tgcatcttgg
      901 ctctgttcag gcctccaata tcagccccga gttttagagt cgttcgagaa tgaagaccca
      961 caaagtcgag gagcattctt ccgttaaaca ggtactccct ccaaaggccg attaactcgg
     1021 tagatatcaa gctgaacgac gctccacgtc cttgcggtgt gctcaggtat ctctttagtt
     1081 tccggtagga accttcgaac actgacagcg tattgatgag cttcttcttg tggtgctcct
     1141 tcaggcgcgt tcggtcagca aactccatag caaaacgtct gtagtcatca agaacttctc
     1201 cgtgcaggac catatcgagc ctggcattcg ggatgggatg ccatgtccca gcagcatccc
     1261 gggtccggaa gccgtaatca aacctatgtg ttccatccgc caactggact tgaaagcagc
     1321 attgctcgta aaacttaccg cttccgcatg gacaaggagg caatggctcg gccacgatga
     1381 tcagcgaccc gtgaaccgcg gctcgcggcg ctcgcggatc gcagccacgc cttccttgag
     1441 gtcggtcgtc gtgtagctga tcgcctggca gaaggcctcg tactcgagcg cgccggtcag
     1501 agcaccctcg gcggcccggt gaacggcccg cttgagcatc cggacgacga gcggcgcgtt
     1561 ccggctgatc gcccgcgcca cctcgaggac ggtcggcatc agctcggccc gcggcaccgc
     1621 ccggttgacg agcccgaggg cctccgcctc ccggccgctc accagccggc cggtgtagaa
     1681 cagctcgagg gcccgggcca gccccaccgc ccgcggcagc gtgagcgtcg aggccatgcc
     1741 ggggtggatc cccagccggg cgaagttgac gcccagcctg gcatcctcgg cggcgtagcg
     1801 aaggtcgcag gccagcgcga gggccagccc gcccccgatc gcgtagccgt ggacggcggc
     1861 gagggtgggg atgggcagtc gcatgagcga gaggtagcgg tcgtagtagt cgagcatcac
     1921 ctggcgactc tcctggaccg gccgccgggt gttgccctcg atcaggctca tgtcgccgcc
     1981 ggcgcagaac gcc
//
LOCUS       DASYRV010000109         8882 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1704507, whole genome shotgun sequence.
ACCESSION   DASYRV010000109 DASYRV010000000
VERSION     DASYRV010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8882
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1704507"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..239)
                     /locus_tag="VGQ24_02710"
     CDS             complement(<1..239)
                     /locus_tag="VGQ24_02710"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEV8453774.1"
                     /translation="MLVELKKSERLTAKELAQRLHVSLNGVRHHLKELESEGLIEYER
                     QYRGVGAPAFAYRLTPAGEALFPRRYEATLNEVLD"
     gene            548..1108
                     /locus_tag="VGQ24_02715"
     CDS             548..1108
                     /locus_tag="VGQ24_02715"
                     /inference="COORDINATES: protein motif:HMM:NF013492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEV8453775.1"
                     /translation="MTIHRIRLLGDPVLRARCDPITKPRSTAVRVIMDDMRETLRDWQ
                     SRFGSGRAIAAPQIGAPVRMVYVEMDQPWPLINPEIIDIGNEDFEVWDDCFSFPNLLV
                     RVSRAYRIKVRYQDLKGEWTEIDVEGDRAELLQHEIDHLDGVLAVDRPLGLDPFCLRE
                     EWHRQHGPSGRYGPPEPRTASYATQL"
     gene            complement(1152..3200)
                     /locus_tag="VGQ24_02720"
     CDS             complement(1152..3200)
                     /locus_tag="VGQ24_02720"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEV8453776.1"
                     /translation="MLPLILILTALLAVTPVYAQACRPARTALVLSGGGAKGLAHIGL
                     LRVMDSLGLRPDLIVGTSMGAAIGALYASGQSGRELDSLSRVVDLNQFFRAYPPRAPR
                     SLGPLQPLVVWEQGERRFSLQSPGIVEAEVNALVNTAMLRGNLIARGNFDSLPVPFRA
                     VATDLATRRAVVLGSGDLAQAVRASVAIPLLFAPERTAEGRVLVDGGLSANIPIRIAR
                     TLGAERVIVSDATEHSTDSLDVYSAISVADRLVQFLFQQEPDSLYDADLVVRPAIEGF
                     TSLNFSRRNVDSLLALGRLAADTVLPRLRCRAVGLSRPSAALPSRITGIQIEGAKPGE
                     RLALERLLGLGLSDSLDFELLLSRVRGLGAAAEAYHAVWLSPAGAGDSVSFHLELRRA
                     ARRVAGLGLVYDNELGGRMWAGLVDRSVFGVAAEGSGAIFLGELRRELYLGLRRKFQV
                     GRQLLDPTLSIRLATENVRRFGAGGDELPEAETREAIGFAGAERILDQNWEGALGIYG
                     HTWREPARGNLSTIGGVARITRTTRTRGQVFLAEGIWTGVYRRAALAGEASLQLGSVR
                     VTPRGRLGWGEGLPLQSTFPLGGDDGFPGLHIGERRGDREAMVGVMFTVPIRRPLLAR
                     IEFAGGRTSLGGGFLEGDWVGGVRAGIGADTPVGPVRLEYGYSTEDRGALFLRLGRWF
                     "
     gene            3312..3575
                     /locus_tag="VGQ24_02725"
     CDS             3312..3575
                     /locus_tag="VGQ24_02725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HEV8453777.1"
                     /translation="MTYVIVEACIGVKDRACVDVCPVDCIYEGEDQLYIHPDECIDCG
                     ACEPECPVTAIFPEEDVPPDQAPFIEKNKEVFNSDTPPGRPKR"
     gene            complement(3784..4992)
                     /locus_tag="VGQ24_02730"
     CDS             complement(3784..4992)
                     /locus_tag="VGQ24_02730"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEV8453778.1"
                     /translation="MSLPEIDLVVYPDECDAFGHLNQASVLSLFERARWEMLLRGPGM
                     DVFTRAGAWPALRKTVIDYRAAAFPGDVLRFQQLLTHHGRTSFTMRQTARRVRDDSLI
                     ASAEFVFVCIDREGRPIPVPEEFSLFMNARRVATGDMQRLMVHGVNLAVEVRGEGPAI
                     LFVHGYPLDHTVWRDQIDALDGYRRIAPDLRGMGQSDAPDLGYGMAIYAADLAALLDA
                     LGVDEVILCGLSMGGYVAFEFLRNWRPRVRGLVLMDTRAEADSPEARRARDTAATVAR
                     ERGASAVAEGMLPKVLSPATLAGHPDVVERVRALMAGTPVPGIVGALAAMRDRTGSES
                     LLPTLMGLPTLVLVGEADGLTPPDLAGAMAQVIPGARLAVIPGAGHLPPVEQPAATTE
                     ALREFLRSLG"
     gene            5134..5304
                     /locus_tag="VGQ24_02735"
     CDS             5134..5304
                     /locus_tag="VGQ24_02735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453779.1"
                     /translation="MKPPTDYIRHAARLARKLQMDASLGGTPQPDAEFYKALSKAFDE
                     IAAGLEQVGKPD"
     gene            5304..6437
                     /locus_tag="VGQ24_02740"
     CDS             5304..6437
                     /locus_tag="VGQ24_02740"
                     /inference="COORDINATES: protein motif:HMM:NF013755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HEV8453780.1"
                     /translation="MAALIETRADLERLFERLRSEPLLAVDTEAASFHRHRDRVYLLQ
                     ISSRQETAVVDPLAVDSLAPLGEVLADPEIEVVFHDADYDLRLLHQEFGFSAANLFDT
                     RVAAQLLNEPGVGLAALLEKYVGVHLDKRYQRADWSVRPLSPEMLDYAAADTRHLLEL
                     RDLLRVRLVERGRLEWAEEEFGLLTGVRWSAPDAEEPAYLRMKGAKALKGRELAVLRE
                     LFQWRDDLAQRTDRAAFRILNNEPMLSMAKSPPADLPALKAVRGIGPEQAERRGRDIL
                     AAVRRGLAIPEQELPRIARPARRPQDPAYEARLERLKAVRNQLALRYDLAPGVLCSNG
                     TLEAIARVNPSTLEGMGEIRELRRWQLREIGGELLAPLQQPAA"
     gene            complement(6446..6745)
                     /locus_tag="VGQ24_02745"
     CDS             complement(6446..6745)
                     /locus_tag="VGQ24_02745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein"
                     /protein_id="HEV8453781.1"
                     /translation="MPTAEAIRKAIRAVKDPELNLNIIDIGLVYDVDVDEAGDVRVQM
                     TLTSPGCPAGAEIIEDVRRVVGDMEGVRSVDVELVWEPYWTPEKMDPRVRTFLGF"
     gene            complement(6814..7944)
                     /locus_tag="VGQ24_02750"
     CDS             complement(6814..7944)
                     /locus_tag="VGQ24_02750"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEV8453782.1"
                     /translation="MSIAALPVSAQSFEEVDATVLEGIKRGVYPGAVVVIGRRDSLLY
                     ARGYGHFTWKPSSPVPSPDSTLWDIASITKVVGTASAVMRLVDTGTLDLNAPVRRYLP
                     RFSGGLKDQVTVRMLLDHTSGLRSYVPLFKRARTKASALDVLYMEGPTRRPGDLPLYS
                     DLNAIFLGLVVESVSKMPLDTFVAREVFDPLELRQTMYHPSPATRRRTVPTALWRGLP
                     VQGQVNDPNAAILGGAAGHAGIFATGMDLARYAQVWLRGGAGPHGQWVSASTLKRFLT
                     KDTNSGPRLLGWDTPEVIKGEPSLYGTLISDAAYGHTGFTGTELWIDPTNDLFLVFLT
                     NRTFDPKAGDSAHRLRPIRTGLSDAAIRLVPHGCQQELVAAC"
     gene            complement(7995..8798)
                     /locus_tag="VGQ24_02755"
     CDS             complement(7995..8798)
                     /locus_tag="VGQ24_02755"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF012630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031012 - extracellular matrix [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HEV8453783.1"
                     /translation="MKRAVLPLITLGLFALVVADRLSHALGSAGHQPAVQGPSDTRSA
                     TIELEGTTKGSAAGKPADQPGNTPSVDRLARLAARQQLSREGSLTYLDSLILSTDSVV
                     RRWPDRQGVPLRVSAVEGGLTGYQPRMFGFVREALGLWEGTGMGVHFAIVPDTTGADI
                     VVHWIDHFDFDRAGQTDLTWDQAGRVRKAAISLAIRTNTGFALPDAALLAVAVHEAGH
                     ALGLPHSADSNDVMFPATRIGTLSDRDRRTAQVLYRLPPGPVRDTGGAP"
BASE COUNT         1690 a         2842 c         2873 g         1477 t
ORIGIN      
        1 tggtcgagga cctcgttcaa ggttgcctcg tagcggcggg ggaacagggc ctcgccagcc
       61 ggggtgagcc gatacgcaaa cgcgggcgcg cctacgccgc ggtactgccg ctcgtactcg
      121 ataagacctt ctgactccaa ctctttcaag tgatggcgga cgccgttgag cgagacgtgc
      181 agccgctgag cgagctcctt agcagtgagc cgctccgact ttttcaactc gaccaacatg
      241 ctcccccgat ggccgcgctg acctatcggc agggagcgtt cagtggagtc ggtgaaggaa
      301 ggaagggtgc ccataacgag gaatcataag tgaaatagtc ggaattgtca attcatgcca
      361 caaattggtg cgaattagat gctccatgta gatcaatcac ttacgcactc tcgaggcgcg
      421 gtatggtagg ctgcgagtga tggaggtatt tattgctact acgccactgc gctggcccgc
      481 tggaacctca tcttacatat tgggctccgc agaggggtct ccactcatac ctgaggtggc
      541 acccgctatg accatacacc gtatacgact cttgggcgat cccgtcctcc gcgcccggtg
      601 cgacccgatc accaagccgc gctccacggc cgtgcgggtg attatggatg acatgcggga
      661 aacactccgg gactggcagt ctcgattcgg gagcggacgg gcgatcgcgg ccccccagat
      721 cggcgccccg gtgcgcatgg tttacgtgga gatggaccag ccctggccct tgatcaaccc
      781 agagatcatc gatatcggca atgaagactt cgaggtctgg gatgactgtt tttcgttccc
      841 caacttattg gtccgggtgt cccgtgccta tcgaatcaag gttcgctacc aggatctgaa
      901 gggagagtgg accgagatag acgtggaagg cgatcgcgcc gagctgctcc agcacgagat
      961 cgatcacctc gacggcgtgc ttgccgtaga tcgcccgctg ggactggacc ccttctgcct
     1021 gcgcgaggag tggcatcgac aacacggccc cagtggccgg tatggcccgc ctgagcctag
     1081 aactgccagc tacgccactc aactctagcg aagaagcgcg ggagctccca acagcgcccg
     1141 cgatcatcgg ttcagaacca tctccccagt ctaaggaata gcgctcctcg gtcctcggta
     1201 ctgtatccgt actcgagccg gaccggcccg accggcgtat ctgcccctat tcccgcgcgt
     1261 actccgccaa cccagtcgcc ttccaggaag ccccctccga gtgacgtgcg tccgcccgca
     1321 aattcgatcc gtgcgagcag cggccggcga atgggcacag tgaacatcac tccgaccatc
     1381 gcttccctgt ctccgcgacg ctccccgata tgaaggccag gaaacccatc atcaccccca
     1441 agggggaagg tggattgcag cggcaatccc tcgccccagc ctagccgacc tctgggagtt
     1501 acccgaacgc tgcccagctg caggcttgcc tctcctgcta gagcagcgcg gcggtacact
     1561 ccggtccaga tcccttcggc cagaaatacc tgcccccggg tgcgagtggt ccgggtaatc
     1621 cgcgctactc cgccaatcgt ggagagattg ccccgcgccg gctcccgcca ggtgtggcca
     1681 tagatgccga gcgcaccctc ccaattctga tcgagtatcc gttccgcccc agcgaatccg
     1741 atcgcttcgc gagtttcggc ttcagggagc tcgtcaccgc cggcgccgaa gcgcctcacg
     1801 ttctcggttg ccagtcggat actgagagtc gggtcgagca actggcgtcc gacttgaaat
     1861 ttccgacgca gacccaggta aagctcgcgg cgcaactcgc ccaagaagat tgcgccgctg
     1921 ccttccgcgg ctacgccgaa gacagagcgg tcgaccaggc ccgcccacat ccgaccgccc
     1981 agttcgttat cgtagaccag tcccaacccg gccacccggc gggccgcacg acgaagctct
     2041 aaatggaagc tcaccgagtc gcccgcaccc gctggactaa gccacactgc gtgatacgct
     2101 tcggccgctg cgccgagacc ccgcactcgg gagagcagta actcgaagtc gagcgaatcg
     2161 ctcagtccga gaccgagaag cctctccagc gccaggcgct ctcccggctt agcgccctcg
     2221 atctgtatcc cggtgattct cgaagggagt gcggcgctcg ggcgagataa tcccacggct
     2281 cgacaacgaa gcctgggcaa cacggtgtcg gccgccagtc ggcccagtgc aagcaggcta
     2341 tcgacgttcc ttcgggagaa gttgaggctg gtgaacccct cgatcgcggg ccggaccacc
     2401 agatcggcgt catacaacga gtcgggttcc tgctggaaga gaaactgcac cagccggtcc
     2461 gcgacgctga tcgccgaata cacatcaagc gagtcagtcg agtgctcggt agcatcagac
     2521 acaatcaccc gctcggcacc caaagtgcga gcaattcgga tgggaatgtt ggccgaaagt
     2581 cctccgtcta ccaggacgcg gccctcggca gtgcgctccg gcgcgaagag aagcgggatc
     2641 gcaacactgg cccggacggc ctgagccaag tctcccgacc cgaggactac tgctcgacgg
     2701 gtagcgaggt cggtcgccac cgcgcggaag ggaaccggca gggaatcgaa attgcctcgg
     2761 gcgatgagat tcccccgcag catggccgtg tttaccagag cgttgacctc ggcctcgacg
     2821 atgccagggc tctgcagact gaatcgccgc tcaccctgtt cccagacaac gagcggttgc
     2881 agtgggccca atgagcgcgg cgcgcgtggg ggataggctc gaaaaaactg gttcagatcg
     2941 acgacccgag agagcgagtc gagttcacga ccgctttgtc cgctcgcgta cagggcaccg
     3001 atggccgcac ccatactggt gccgacaatg aggtcgggcc ggaggccgag gctgtccatg
     3061 acgcggagca ggccgatatg agccaggccc ttggccccgc ccccggagag gaccagcgcc
     3121 gtgcgcgctg ggcggcacgc ctgagcgtag accggcgtca ccgccaacag agcggtcagt
     3181 atgaggatga gcggtagcat gcggacagca aaataagggc gctcccggcc cttgcgccgc
     3241 atcggcaccc ttcgtatacc tttgcgagag cgccgtgtcg cacggccgcc attcgccgga
     3301 ggagccgcag catgacctac gtgatcgtcg aggcctgcat cggggtgaag gatcgggcct
     3361 gcgtggatgt ctgtccggtg gactgcatct acgagggaga ggatcagctc tacattcacc
     3421 ctgacgaatg catcgactgc ggcgcgtgtg agccggagtg tccggtaacg gccatcttcc
     3481 cggaagagga cgttccaccc gaccaggcgc cattcataga gaagaacaag gaggtcttca
     3541 atagcgatac cccgccgggg aggcctaagc ggtaaccggt aagcggtgag aggttagcgg
     3601 ggggctccga agcagatggg gccccttctt actgcttgct caccgttgaa aagaaaggag
     3661 ccccgggatc gtactgcttg gccgcgatcc cggagccgaa gtgtggaagg atacctgttt
     3721 ggcggcgagc cagggttccg acgtgccgcc tcctaaaaga acgcctgacc aggccataga
     3781 gtttcacccc agcgagcgaa gaaactcccg gagagcctcg gtggtggccg ccggttgctc
     3841 aaccggcggg agatggccgg cgccgggtat gaccgcaagc cgagcgccgg ggatcacttg
     3901 cgccatggcc cccgcgagat ctgggggggt aaggccatcg gcttcgccca ccaggaccag
     3961 agtggggagg cccatcagcg tggggagcaa ggactcgctg ccggtccggt cgcgcatggc
     4021 ggccagggcg ccgacaattc ccgggactgg tgttccagcc atgagcgccc gaactcgttc
     4081 gacgacatcg gggtgcccag ccagggtggc gggactcagg accttgggca gcatcccctc
     4141 tgcaacagcg gaggctcctc gctcgcgagc gactgtggcg gccgtgtcac gcgcacggcg
     4201 cgcctcaggc gaatcggctt ccgcccgggt gtccatcagc accagaccgc gcactcgagg
     4261 ccgccagttt cgcaggaact cgaatgccac gtagccaccc atcgaaaggc cgcagagaat
     4321 aacctcgtcc acaccgaggg catcgagcaa cgccgcgaga tccgcggcgt agattgccat
     4381 gccatatccc aggtccggtg catcggattg gcccatgccc cgcaaatccg gagcgatgcg
     4441 gcgatagccg tcgagcgcgt cgatctggtc gcgccagacg gtgtggtcca agggatagcc
     4501 gtgcacgaac agaatggcag ggccttcacc ccgcacctcc accgcgaggt tcaccccatg
     4561 caccatgagc cgctgcatgt cccccgtcgc gacccggcgt gcgttcatga acaggctgaa
     4621 ctcctccggt accggaatcg gccgaccctc gcgatcgatg cagacgaaga cgaattcggc
     4681 actcgcgatc aggctgtcat cgcggacgcg tctggccgtc tggcgcatgg tgaagctggt
     4741 tcgcccgtga tgggtgagca gctgctgaaa gcgaagcaca tcgccgggga atgcggcagc
     4801 ccggtagtcg atgacggttt tccgtaacgc aggccaggcg ccggcccgag tgaacacatc
     4861 cataccgggg ccgcgcagca gcatttccca gcgggcgcgc tcaaacaggc tgaggaccga
     4921 ggcctggttg aggtgcccga aggcatcgca ttcgtccgga tagacgacaa ggtcaatctc
     4981 ggggagggac atggggaaat aatagcgggg cagcgcggca gcggggcggt ggggcagcgc
     5041 ctggggtggc ttacgacttt gctccgccta acttcaagca atgacgatgt tcactctgcc
     5101 ctgctgcccc gcggccccgc cgccccgccg aacatgaaac cacctaccga ctacatccgc
     5161 cacgccgctc gtctcgcccg aaagctccag atggatgctt ccttgggtgg cacacctcag
     5221 ccggatgccg agttctacaa ggcgctctcg aaggccttcg acgagatcgc ggccggcctg
     5281 gagcaggtgg gcaagccgga ctgatggctg ccctgatcga gacacgggca gatctcgagc
     5341 ggctcttcga gcggctgaga tccgagccat tgcttgcggt ggacaccgag gctgccagtt
     5401 tccaccggca ccgggatcga gtgtatctcc ttcagatctc gtcccgccag gagacggccg
     5461 tcgtcgatcc gctggcggtc gacagcctgg ccccgctcgg ggaagtgctg gccgatccag
     5521 aaatcgaggt cgtgtttcat gatgccgact acgatctgcg gctactgcac caggagttcg
     5581 ggttcagcgc agcgaacctc ttcgacaccc gggtcgcggc ccaactgctc aatgagccag
     5641 gcgtagggtt ggccgcactg ctggaaaagt acgtcggcgt gcacctggat aagcgctacc
     5701 agcgtgcgga ttggtcggtt cggccgctct cacccgaaat gctcgactac gcggctgccg
     5761 acacccggca cctccttgag ctgcgggatc tgctgcgggt gcgactggtc gagcgaggac
     5821 gcttggagtg ggccgaggag gagtttggtc tgctgacagg cgtccgctgg tcggcaccgg
     5881 atgcggagga gccggcgtat ctgaggatga agggagcgaa ggccctcaaa ggaagggaac
     5941 tggcggtctt gcgcgagctc tttcagtggc gggatgatct ggcccagcgc accgaccggg
     6001 cggcgttccg cattctcaac aatgagccga tgctgtccat ggccaagtca ccccccgccg
     6061 acctgccagc gctgaaagcg gttcgcggga tcgggccgga gcaggcggaa cgccgcggaa
     6121 gggatattct ggcggcggtg cgcaggggac tggcgatccc ggagcaagag cttcctcgca
     6181 ttgcgcgtcc tgcgcggcgt ccacaggacc cggcgtacga ggcgcggctg gagcggctga
     6241 aggcggtacg caaccagctc gccctgcgct atgatcttgc cccgggagtg ctctgttcca
     6301 acggtactct cgaggcaatt gcccgggtca atccatcaac gctggagggg atgggtgaga
     6361 tccgcgagct gcgtcgctgg cagctcaggg agatcggcgg agagctgctg gccccattgc
     6421 aacagcccgc cgcttaggcc ggggctcaga acccgaggaa ggttcgaacc cgagggtcca
     6481 tcttctccgg ggtccagtac ggctcccaga cgagctccac gtcaaccgac cgtaccccct
     6541 ccatatcgcc gacgacgcgc ctcacgtcct cgatgatctc ggccccggca gggcagccgg
     6601 gggacgtgag agtcatctga acgcggacat cacccgcctc gtccacgtcg acgtcataca
     6661 cgagaccaat gtcgatgatg ttgaggttga gctcgggatc cttcacggca cggatggctt
     6721 tccggatggc ttcggcggta ggcatagtac gctcgcggct gggatcagta tctctcaaca
     6781 actccttatc ggaaagataa cgggccggct cgatcaacac gcagcaacca gctcctgctg
     6841 gcagccgtgg gggaccagac gaatagctgc atcggagagc ccggtcctga tgggccggag
     6901 gcgatgagcg gagtccccgg ccttggggtc gaaggtccgg ttcgtgagaa aaaccaggaa
     6961 caggtcgttg gtagggtcga tccacagctc cgtgccggtg aagccggtat gtccgtacgc
     7021 cgcgtcgctt atgagggtac catagaggct cggctcaccc ttgatgactt cgggtgtatc
     7081 ccagccgagt agtcggggac cgctgtttgt gtccttggtg agaaagcgct tcagggttga
     7141 agcactcacc cattggccgt ggggtccagc tccgccccgc agccagacct gggcgtaccg
     7201 ggcgaggtcc atcccggtgg cgaagatgcc cgcgtggccg gctgcgccgc ccaggattgc
     7261 cgcgttggga tcgttgacct gtccctgcac ggggagaccc cgccagaggg cggtgggcac
     7321 ggtgcgccgg cgagttgcgg gcgaagggtg atacatcgtc tggcgcagct cgagcgggtc
     7381 gaatacctcc cgcgcaacga aggtgtcgag cggcatcttg gacacactct caacgaccag
     7441 tcccagaaaa atcgcgttga ggtcgctgta gaggggcagg tcacctggcc ggcgggtcgg
     7501 tccctccatg tagaggacgt ccaaggcact cgccttggtt cgcgcccgct tgaacagtgg
     7561 gacataactc cgaagtccac tcgtgtgatc gaggagcatg cgcaccgtca cctggtcctt
     7621 gaggcctccg gaaaagcggg gcagataacg gcgaaccggc gcattcagat cgagcgttcc
     7681 cgtgtccacc aaccgcatga cggcactcgc cgtgccaacc accttggtga tcgatgcaat
     7741 atcccacagg gtggagtcgg ggctcggaac cggtgaggac ggcttccaag tgaagtggcc
     7801 gtatcctctg gcgtacaaca atgaatcccg gcggccgatg acaacgaccg ctccggggta
     7861 aacaccccgt ttgattccct ccaaaacggt agcgtccacc tcctcgaacg attgggccga
     7921 gaccggcaga gcggcgatcg acaaccctgc agtcagcacg aggccgggca gccggctcca
     7981 cccgctgcgg ggcttcaggg cgccccgccg gtgtcacgga cggggccagg cggcagccgg
     8041 tacagcacct gggcggtacg gcggtcccgg tctgagagcg ttccgatccg ggtagctgga
     8101 aacatgacat cgttggagtc ggcagagtgc ggaaggccga gggcatggcc cgcctcatgt
     8161 acggcaaccg cgagcagcgc cgcatcaggt aacgcgaaac ccgtgttcgt acggatagcg
     8221 agggagatgg ctgcctttcg cacccggccg gcttgatccc aggtaaggtc cgtctggcca
     8281 gcccggtcga agtcgaagtg atcgatccag tgcaccacga tatctgcgcc ggtggtgtcc
     8341 gggacgatgg cgaaatgcac ccccattccg gtgccttccc aaagcccgag cgcctcacgc
     8401 acaaacccga acatccgtgg ctgatagccg gtcaggccgc cttcgaccgc gctgacgcgc
     8461 agaggcactc cctggcgatc cggccagcgg cggacgaccg aatcggtact gaggatcagg
     8521 gaatcgagat acgtgagact gccctcgcgg ctgagctgct gccgcgcggc gagccgcgcg
     8581 aggcggtcca cggaaggcgt gttgccgggc tggtccgccg gcttcccggc agcgctgccc
     8641 ttggtggtgc cctcgagctc tatcgtcgcc gaccgggtat cactcggccc ctggacggca
     8701 ggctgatgtc cggccgaacc cagggcgtgc gacagccggt ccgccacaac caacgcaaac
     8761 agcccgagtg tgatcagcgg cagcactgcg cgcttcatag gtctcccgat gtgagccggc
     8821 ctggattggg gttgccagcc cggctggggg gctccgcttc ggaatggctc gagtctttct
     8881 cg
//
LOCUS       DASYRV010000110         2632 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_874866, whole genome shotgun sequence.
ACCESSION   DASYRV010000110 DASYRV010000000
VERSION     DASYRV010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2632
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_874866"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..876)
                     /locus_tag="VGQ24_02760"
     CDS             complement(<1..876)
                     /locus_tag="VGQ24_02760"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEV8453784.1"
                     /translation="MLITGATGFIGSHLAIAAANKYVVRSLTRKDWTGPPAVPTERRY
                     FGNLPFGIPESAFEDVHVVVHCAATAEPNERKARAINVDGTVQLGELARKHGVETLIF
                     LSSQSARPDAISAYGRTKFLAEQELLSLDGLRVIILRPGLVVGPGGHGLFSRLVSSVV
                     RLPLVPLPDGGRGVVQPIQVDDLCEAILRCDRESSELSRAILKLGDPKGERLADFVQE
                     IALAYLGRRRLTVSIPLGPIEAAVRHAETLHLPLPISSTNLRGMRIVELMQTADDMER
                     LGLPIRPVAEMLRMES"
     gene            complement(909..>2632)
                     /locus_tag="VGQ24_02765"
     CDS             complement(909..>2632)
                     /locus_tag="VGQ24_02765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453785.1"
                     /translation="GSYAWRGWGLWSQLWAMWLMPLAWGFSWRAVSQSKPTRYAVAAL
                     VVGLTAAFHFLSGYLAFLVLGVWVLIRPGEFLRRLGRAVLVGLGALLIISWVVVPLLL
                     DSRWTSQSQYLRGKYWLDSFGARRVLGWLFTGQLFDGTRTIPVISALVGVGAIVCISR
                     FRHDERARALLGVMLLSLLLFFGRPTLGPALKLLPGSSDLLLHRYVMGVHMAGILLAG
                     VGAAWLSLIVLGAMRRLIPQVARPATAAAVVLLGLGALAPAWAERWGTVDRQGGDWIR
                     QQRTVDASPDAAIRSLVREAQARGPGRVYAGMWRRDSCTASMEGLVAGCQAPLGYQVD
                     SVGFSLRTTSLASDFEANFDDTNPAQYDLFNVRYVILPSGRQPFVPASLIEQEGGAAL
                     WEIETSGYVDVVDTVPPPIAANRSDLYQQAGFFLQSDLLAQSRYPNVAFAGEPAAPPT
                     LSGGEQPPVPAGSVEFEDDALADGAVTVQVVANRPAMVILKSSFDPRWQVIVDGVPLG
                     PQMVAPSFVGRTVPPGPHTVVFRYQPFPSYDVLFSIGALAFVGLWFGPGILRRGRGRS
                     HAAPDEP"
BASE COUNT          517 a          899 c          822 g          394 t
ORIGIN      
        1 ggactccatg cgaagcatct cggcgacggg tcggatcggg agtcccagcc gctccatatc
       61 atctgctgtc tgcataagct ccacaatccg catcccacga aggtttgtgc tactgatggg
      121 caggggcaga tggagagtct ctgcgtgccg aaccgcggct tcgatggggc caagtggaat
      181 cgaaactgtc agtcgccgac gccccagata ggccaatgcg atctcttgta cgaagtctgc
      241 gagccgttcg cccttcggat ctcccagttt caggatcgcg cgagacaact ccgaagactc
      301 ccggtcacag cgcaggattg cttcacagag atcgtcgacc tggatcggct ggacgacgcc
      361 tctcccaccg tcgggaagcg gcacgagcgg gagcctcacg acgctggaga ccaaacggct
      421 gaacaggccg tggcccccag gaccaacgac gagaccgggg cggaggatga tgaccctcag
      481 tccgtccaag gaaagaagtt cctgttcggc gaggaatttc gtcctgccat aagccgaaat
      541 ggcgtcgggc cgggccgact gcgaagagag aaagatgaga gtctcaacgc cgtgcttccg
      601 agccaactcg cccagttgaa ctgttccatc cacgtttata gcgcgcgcct tacgctcatt
      661 gggctccgcc gtcgcggcac agtgcacgac gacatggacg tcttcaaagg cgctttcggg
      721 gatcccaaag ggtaagttgc caaagtaccg tcgctccgtt ggcactgccg gaggaccggt
      781 ccaatctttg cgcgtcaggc tcctcacgac atacttgttc gctgccgcga tcgccaagtg
      841 cgaaccgata aacccggtcg ccccggtgat cagcatcacc cggccgctcc cgccggtcat
      901 gtccgctgtc aaggctcgtc cggtgctgcg tggcttcgtc cgcgcccgcg tctaaggatg
      961 cccggtccga accacaaccc cacgaatgcg agcgcgccga tcgagaacaa aacgtcgtaa
     1021 gaggggaacg gttggtagcg aaacacgacc gtgtgcgggc ccgggggcac cgtcctccca
     1081 acaaagctcg gggcgaccat ctgcggccct agagggacgc cgtccacgat cacctgccac
     1141 cgaggatcga aggagctctt cagaatcacc attgccggcc ggttcgccac gacctgtacg
     1201 gtcacggctc cgtccgcgag cgcatcgtct tcgaactcga ccgagccggc cgggaccggc
     1261 ggctgttccc ctccactcaa cgtgggtggg gccgcgggct cgccggcgaa tgcaacgttc
     1321 ggatacctgc tctgggccag cagatccgat tggaggaaga accccgcctg ctggtacaga
     1381 tcggatcggt ttgccgcgat cggaggaggc acggtgtcca cgacatctac atagccgctc
     1441 gtctcgatct cccacagcgc ggctccgccc tcctgctcga tcaggctcgc gggcacgaag
     1501 ggctgccgcc cggaaggcag gatcacgtac cggacgttga agaggtcgta ctgcgccggg
     1561 ttcgtgtcat cgaagttggc ttcgaagtcc gaggcaaggg atgtggtccg cagtgagaac
     1621 ccgacgctgt cgacctgata gccgagcggg gcctggcacc ccgccaccaa cccctccatg
     1681 gaggccgtgc acgaatcacg ccgccacatc ccggcataca cgcggccggg gccccgcgcc
     1741 tgggcctccc ggacgagcga acggatggcg gcatcggggc tggcgtcaac cgttcgctgc
     1801 tgccggatcc agtcaccgcc ctgccggtcg accgttcccc accgctcggc ccacgcgggc
     1861 gcgagggctc ccaatcccaa caggacgacg gcggctgccg tggcgggacg cgccacttgc
     1921 gggatcaggc ggcgcatcgc gcccagcacg atgaggctca gccaagcagc gccgactccc
     1981 gcgagcagga tgccggccat gtggacgccc atgacgtatc gatggagcag cagatcgctg
     2041 cttcccggca ggagcttgag cgccggaccc agggtcggcc gcccgaagaa cagcagcagg
     2101 ctgagcagca tgacgcccag cagcgcgcgc gctcgttcgt cgtgacggaa tcgcgagatg
     2161 catacgatgg ctccgacgcc taccagcgcg ctgatcaccg ggatcgtccg ggtcccatcg
     2221 aagagctgcc cggtgaacag ccagccgagc accctccggg cgccgaaaga atccaaccaa
     2281 tacttccccc ggaggtactg gctttggctc gtccaccgac tgtccaggag gagcgggacc
     2341 acgacccagg agatgatcag cagagcgccc aggccaacaa ggacagctcg gcccaaccgc
     2401 cgaaggaatt ctcccggccg gatcagcacc cacaccccga ggacgaggaa cgcaaggtat
     2461 ccgctcagga agtggaacgc ggcggtgagt cccaccacga gggcggcgac cgcgtaacgg
     2521 gtgggcttgc tctggctcac cgcccgccac gagaaccccc atgccagcgg catcagccac
     2581 atggcccaca gctgcgacca caacccccat ccgcgccagg cgtagctgcc ga
//
LOCUS       DASYRV010000111         4632 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1288092, whole genome shotgun sequence.
ACCESSION   DASYRV010000111 DASYRV010000000
VERSION     DASYRV010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4632
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1288092"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..405
                     /locus_tag="VGQ24_02770"
     CDS             <1..405
                     /locus_tag="VGQ24_02770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453786.1"
                     /translation="IAAAERGITASATPTTWPTHSCATAACPYGEQRLMSLEGASFFS
                     LPQCNSALRRLPQNVLTRDELLDNLMLYWLPGAGASRTARPVRQRGPLVLPLGPVTIG
                     RRRLARGGAQQPPLLSIQIPVAGTYGQGMHAS"
     gene            566..787
                     /locus_tag="VGQ24_02775"
     CDS             566..787
                     /locus_tag="VGQ24_02775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453787.1"
                     /translation="MPVDEIPNPGQGALAADGNGDGDGGGGGGGGGCSNSNSHNRAQV
                     SLQDITSVINQLARTLPAVEGGSSEAPPR"
     gene            810..1025
                     /locus_tag="VGQ24_02780"
     CDS             810..1025
                     /locus_tag="VGQ24_02780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453788.1"
                     /translation="MSIESQPNPALSDVGQVETGAQAAGGCSNSNSHNAGGGGGQPSQ
                     EEMRSILNQLAAVLPRLQRAAESAPPG"
     gene            1067..2221
                     /locus_tag="VGQ24_02785"
     CDS             1067..2221
                     /locus_tag="VGQ24_02785"
                     /inference="COORDINATES: protein motif:HMM:TIGR03882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TOMM precursor leader peptide-binding protein"
                     /protein_id="HEV8453789.1"
                     /translation="MPRDLPAFELKLRIAEGLDAVVISDNEVLVQFGSRSFPSQLLRD
                     TDLTGILGRIFGELQDAPKRPVDLLSVVGLEHRAEAVRLIDRLCNDGILVSTDKSPVD
                     QFLAYTFNGETRLADASVSLVGAGPLGARIAETLLQHGIGRIRLLEGREPDEVWHALL
                     SPSPPTGADPGESGSASVMLRDRLLGLGYRGVEAFDAGVNEEAVGRAVSSSDITVVAL
                     EQLDIRAMHLINRHCIGAGRPWVHSSLDGGRGVVGPLFVPGTTACYNDFRSLAEAADP
                     SPLMARAYRRHAIRRGAASFSPGLPAHAEIVSGFASLAVVHFLLSSTSYLLGRVLTID
                     FDRMLIDVEDVLKLPRCPVCGRQRSAYQPPFSAEVVTRARTTDRKSGEGG"
     gene            2223..3638
                     /locus_tag="VGQ24_02790"
     CDS             2223..3638
                     /locus_tag="VGQ24_02790"
                     /inference="COORDINATES: protein motif:HMM:TIGR03604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcaO-like family protein"
                     /protein_id="HEV8453790.1"
                     /translation="MRLTTTYLNERVELLDAVYGEERAAELAAVARIYNRTIGPVTAV
                     NLVRPELCDLSMYSAYCRHVPFERLLRDLRAKSGPYAGIVPGGGKGVSMLRPAIGALG
                     EMTERLLAMLQFGDLQESVRYATYADLERAGQRALGPGEVPLFADQQLAAPGFEYAPF
                     EEDTWLGWIQGSELLTGEPVWVPAQLVLMYYKPHPAERPIGYATTAGLAFQTSRRRAI
                     LHGLFEVVERDALNIRWYSRLPPARVEVDLGEVMASGFGVTRSRMSTPHLEVQVFELT
                     IDSPIPVLAAIGIDRSRAERAFLGGTGASAKRKDALGQALFELGQCQTGFHFEDPFGR
                     SPIYEDTDLADVVEFFDAPLFYGYARNISRTYWFTASQRRVSWEGLTTSDLAEDAVYE
                     RMGDWLGRRELNPIVLDLGGACPPGMAITKVYVPGLTHACPPRNPTLGHPRFYEIPRQ
                     LGFSDRRLTFEDLNPDPIPFA"
     gene            3682..4440
                     /locus_tag="VGQ24_02795"
     CDS             3682..4440
                     /locus_tag="VGQ24_02795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453791.1"
                     /translation="MATRRNRPRYGAADVLNAALYGPLLWPGRTVRLERNSMLDYRNR
                     PTSSQISVAELYHENSKLSVEMLPELVFTSVSPTELRGEFLRRRAALARTAAADQFDG
                     AKLWRDLLDAVGAQYLDLFYAIEVRVVSGNVVAAYEPAGSVFQLIGRLDGPQRARLES
                     SLWLGSAGDGPGDAESLLFLVAVFPRNEILYGQRGYRRTLIEAGQIAEAVLRRAAQTG
                     HRATVRHEFADRDIDLIMEADGVEQSTVLAIAFG"
BASE COUNT          723 a         1569 c         1552 g          788 t
ORIGIN      
        1 atcgccgcgg ccgagcgtgg catcaccgca tccgccacac ccaccacctg gcctactcat
       61 tcctgcgcta ctgcggcctg tccctatggt gagcaacgac tcatgtcctt ggaaggggcg
      121 agcttcttta gcttgccgca atgcaacagc gccctgcgac ggctacccca gaatgtgctc
      181 acccgcgacg agctgctcga caacctgatg ctctactggc ttcccggagc cggcgcctcc
      241 cgaacagccc gacctgttcg tcagcgaggt ccgctcgttc ttccgcttgg cccggtgacc
      301 attggtcgcc gtcgactcgc ccgcggcggg gcccaacagc ctcctctgct ctccatccag
      361 atcccagtcg cgggcaccta tggacaaggc atgcacgcga gctagtctaa ctattgctct
      421 gtttccgcca tgcttctcac ttcgcttcgt gcgctggatc ccgcggctga gccaatccca
      481 gcgaatcgcc agtattgttc tgtcccgcag acccgattcc gtgttgcgag acggcccttc
      541 acgatcgtcg aggaggcgag gtcaaatgcc ggtcgatgag atcccgaacc cgggtcaggg
      601 cgcgctcgcg gccgacggca atggggacgg agacggtggt gggggtggcg gcggaggcgg
      661 atgttccaat tccaattcgc acaaccgtgc ccaggtatcc ctgcaggaca tcacgagcgt
      721 catcaaccag ctggccagga ccctgcccgc ggtagaaggc ggcagcagcg aggctccacc
      781 gaggtgatcg gcacgaaggg ggaagcgcga tgtcgataga gtcccagcca aaccccgccc
      841 tgtcagatgt ggggcaggtg gagaccggtg cgcaggctgc tggtggctgc tccaactcca
      901 acagccacaa cgcgggcggc ggcggtggcc agccctcgca ggaggagatg cggagcatcc
      961 tgaaccagtt ggccgcggtg cttcctcgct tgcagcgggc cgcggagtcc gccccgcccg
     1021 gctgatcgtc gcggccatct cgtctcgccg gaatcagcgg aatcagatgc ccagggacct
     1081 tcccgcgttc gagctcaagt tgcggatcgc cgaggggctg gacgcggttg tcatcagcga
     1141 caacgaggtt ctcgttcaat tcggaagccg gtcttttccg tcccagctgc ttcgcgatac
     1201 ggatctcacg gggatcctcg ggaggatctt cggcgagttg caggacgcgc ccaagcggcc
     1261 cgttgacctg ctctcggtcg ttggactgga gcatcgggcc gaggcggtca ggctcatcga
     1321 ccgcctctgc aacgacggca tcctggtcag cactgacaag agcccggtcg accagttcct
     1381 cgcgtacacc tttaacggtg agacccggct cgccgatgcg agcgtcagcc tggtcggggc
     1441 cgggccgctg ggtgcccgaa tcgccgagac gctcctgcag cacgggatcg gacggatccg
     1501 gctcctggag ggccgcgagc cggacgaggt gtggcatgcg ctactgtcac catcgccacc
     1561 gacgggcgct gaccccggcg agtcggggtc agcgtcggtc atgctccgcg accggctgct
     1621 cggtctgggc taccggggag tggaggcctt cgacgccggc gtgaacgagg aggcggtggg
     1681 acgagccgtc tcgagctcgg acatcacggt cgtcgcgctg gagcaactcg acatccgggc
     1741 catgcacctg atcaaccggc actgcatcgg ggccggcagg ccgtgggtcc actcctcgct
     1801 ggacggcggc aggggggtgg tgggcccgct gttcgtgccc ggcaccaccg cctgctacaa
     1861 cgacttccgc tcgctcgcgg aagcggccga cccgagcccc ctcatggctc gcgcctaccg
     1921 gcgtcacgcc atccggcgtg gggccgcttc gttctcaccc ggcctgccag cccacgccga
     1981 gatcgtgagc ggcttcgcgt cactggcggt ggtccatttc ctcctctcca gcacgagcta
     2041 cctgctcgga cgggtgctca cgatcgactt cgaccggatg ctgatcgacg tcgaggacgt
     2101 gctgaagctg cccaggtgtc ccgtttgcgg tcggcagcgc agcgcctacc agccgccctt
     2161 ctccgcggag gtcgtcacac gcgctaggac gaccgaccgt aaaagcgggg agggcggctg
     2221 acatgcgcct gaccaccacc tacctgaacg agcgggtgga gctcctcgac gcggtgtacg
     2281 gggaggagcg tgctgccgag ctggcggcgg tggcgcggat ctacaaccgc acgatcggac
     2341 ctgtgaccgc cgtgaacctg gtgcgccccg agctatgcga cctgtcgatg tacagcgcat
     2401 attgccgcca cgtcccgttc gagcggctgc tgcgtgacct tcgggccaag tccggcccgt
     2461 acgcgggcat cgtgcccggc ggcgggaagg gcgtgtccat gcttcgtccg gcgataggcg
     2521 cgctgggcga gatgaccgag cgccttctgg cgatgctgca gttcggcgat ctgcaggaga
     2581 gcgtgcggta cgccacctac gcggacctgg agcgagccgg ccagcgggcg ctgggccctg
     2641 gggaggtgcc gctctttgcc gaccagcagc ttgcggcgcc cggcttcgag tacgcgccgt
     2701 tcgaagagga cacctggctg ggctggatac agggctcgga gctactgacg ggcgagccgg
     2761 tctgggtgcc ggcgcagctc gtgttgatgt actacaagcc gcacccggcg gagcgtccca
     2821 tcggctatgc cacgaccgcg gggctggcgt tccagacctc gcgacgccgg gcgatcctcc
     2881 acgggctctt cgaggtcgtc gaacgggatg ccttgaatat ccgctggtac agcaggctgc
     2941 ctccggcgcg cgtggaggtg gaccttggcg aggtaatggc atccggcttc ggggtcacgc
     3001 gctcgcggat gtcgaccccg cacctggagg tgcaggtctt cgagctgaca atcgacagcc
     3061 ccattccggt gctcgcggcg atcgggatcg accgctccag ggctgagcgc gcgttccttg
     3121 gcggcaccgg cgcgtccgcc aagcgcaaag acgcgctcgg tcaggcgctg ttcgagctcg
     3181 gccagtgcca aaccggcttc cacttcgagg acccctttgg tcgcagcccc atctatgagg
     3241 acaccgacct ggccgacgtg gtggagttct tcgacgcccc gctgttctac ggctacgcgc
     3301 gcaacatctc acggacgtac tggttcaccg ccagccagcg tcgcgtgtcc tgggagggcc
     3361 tcactacctc ggacctcgcc gaggatgcgg tatacgagcg catgggggac tggctgggcc
     3421 ggcgcgagct gaaccccatc gtcctcgacc tcggtggcgc ctgtccgcca ggcatggcga
     3481 tcaccaaggt ctatgttccc gggctcaccc acgcgtgccc accccgcaat cccacgctgg
     3541 ggcacccgcg cttctacgag atcccgcgcc agctcgggtt ctcggaccgg cgcctgactt
     3601 tcgaagacct gaatcccgac ccgataccgt ttgcgtaagg gccgcaggcg gcttgcgacg
     3661 accgaaccag gacgggctcc gatggcgact cgcaggaatc ggccccgcta cggcgcagct
     3721 gacgtgctga acgcggcgct gtacggtccc ctgctgtggc ctggccgcac cgttcggctc
     3781 gagcgcaaca gcatgctcga ctaccgtaac cggccgacct cttcccagat ctcggtcgcc
     3841 gagctgtacc acgagaacag caagctgtcc gtggagatgc tgcccgagct ggtatttacc
     3901 tccgtcagcc ccacggagct ccgcggtgaa ttcctgcggc gacgcgccgc gctggcccgg
     3961 acggccgccg cggaccagtt cgacggcgcg aagctgtgga gggatcttct ggacgccgtc
     4021 ggcgcccagt atctcgatct gttctatgcc atcgaggtgc gggtggtgag cgggaacgtc
     4081 gtagcggcct acgagcccgc cgggagcgtc ttccagctga tcgggcgact cgacggtccg
     4141 caacgggcac ggctggagtc gtcgctctgg ctggggtcgg cgggcgacgg tcccggcgat
     4201 gcggagtcct tgctgtttct cgtcgctgtc ttcccgcgca atgagattct ctatggccag
     4261 cgtggctacc gccgcacgct gatcgaagcc ggccagatcg ccgaggcggt gctccgccgc
     4321 gccgcccaga ccggccacag ggcgaccgtg cgccatgagt tcgccgacag agacatcgat
     4381 ctcatcatgg aggctgatgg tgtcgagcag agtaccgtcc tcgccatcgc gttcgggtga
     4441 tcccgcgccg tcacccaggg aagagctcca tcggctggtg gaactgctgt cggacgatga
     4501 atgcaggtac ctggcgcaca ccgtcggcga catcgccgcc ggcgagcgat tttgggaggg
     4561 cgacttcggc ctgctgtaca acgagtacgc gaagttgcgg tacttcaagg tggggcggca
     4621 ggcaccatcc gc
//
LOCUS       DASYRV010000112         4633 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3760184, whole genome shotgun sequence.
ACCESSION   DASYRV010000112 DASYRV010000000
VERSION     DASYRV010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4633
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3760184"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..784)
                     /gene="meaB"
                     /locus_tag="VGQ24_02800"
     CDS             complement(<1..784)
                     /gene="meaB"
                     /locus_tag="VGQ24_02800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0015819 - lysine transport [Evidence IEA];
                     GO_process: GO:0015822 - ornithine transport [Evidence
                     IEA];
                     GO_process: GO:1903826 - L-arginine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HEV8453792.1"
                     /translation="MDLDLLITELLAGKTAALARAISVVENARPGYERLLAEVHRSLG
                     RARRIGITGPPGAGKSTVVERLVSLYRGGGLKVAVIAVDPTSPFTGGALLGDRIRMES
                     VALDQGVYIRSMASRGSLGGLATTTREVCDLLDAAGFDRILVETVGVGQSELDVARMA
                     DSTVLVLVPESGDGIQTLKSGVMEIADLFVVNKADRTGADKLRQEIEITLGIRRGNAF
                     RNMPVHHGVRAVRRKVGKAVAGKVGSQDAPDTETSPSTAVPPY"
     gene            complement(931..1365)
                     /locus_tag="VGQ24_02805"
     CDS             complement(931..1365)
                     /locus_tag="VGQ24_02805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453793.1"
                     /translation="MPSAHSVTSPPPRVLLVMPEQWPRALLRAALREAGYDALGAAGL
                     AAALRYRTESPGRGLVRLILVDQAALADQESATVLDALLRRHGYPAAVLLARAMPAHP
                     LPATTASAPWRRVIRRPASIADLIAAVQALLPLPPGSGRPIE"
     gene            1586..2299
                     /locus_tag="VGQ24_02810"
     CDS             1586..2299
                     /locus_tag="VGQ24_02810"
                     /inference="COORDINATES: protein motif:HMM:NF025702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4397 domain-containing protein"
                     /protein_id="HEV8453794.1"
                     /translation="MRGTACIRLLIGGVLLAAVSCTGDGEGTGPASPTGSLRVIQAAE
                     STSALDVLVDGSVVINGLGAGTISSPVALSAGQRVIEVRPVGGATSPNRLQLAVVADL
                     DYAAVVIDSSTVLNPVALTDSGATPAAGKTKLQVANFASLAGPIDVYRRQPDFDGLVD
                     LMFPFAYRAVSGYVQSDPGDWQVLVASEARVDGVPPDVPQDTLLIVEPISLAAGQAVT
                     VVLLDKAGGGIDAVLVRDR"
     gene            2323..2445
                     /locus_tag="VGQ24_02815"
     CDS             2323..2445
                     /locus_tag="VGQ24_02815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453795.1"
                     /translation="MAHVATSPRYPTTLHYRGHGVLMISGRNVSYRDRFKRGNL"
     gene            2447..3004
                     /locus_tag="VGQ24_02820"
     CDS             2447..3004
                     /locus_tag="VGQ24_02820"
                     /inference="COORDINATES: protein motif:HMM:NF023113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2380 domain-containing protein"
                     /protein_id="HEV8453796.1"
                     /translation="MNSLLSLALAGLLGASTRTSGPPPKVAVLPIELNNIHKSAPDSA
                     LAGRIARLADALRARLAAACGYEVVPVDSATEAAAHVTDGYFYDHPDVAVGLALGAGA
                     DWVIIPRLNRATAWAADLQAHVVRVRDTVLVSNRIVEFKGLELTPELAARLTERGSAW
                     MADQLSQVIELARSPTGARARRCPP"
     gene            3066..3692
                     /locus_tag="VGQ24_02825"
     CDS             3066..3692
                     /locus_tag="VGQ24_02825"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8453797.1"
                     /translation="MAERYDDQLEWSTLMEPSAPPDTPQRWARILPDHHRDYPVTYRG
                     QWFRIVEHDDPEVPIEPGYIWLDLKGGAQRVSASHFEIAERTKRRILVVDDDPGIRQT
                     LQIALSKTGYEVLEARDGEEATRLWHEAAPDLVIADIHMPKKSGLLLIQDIRDYDSST
                     PVIVMTDGGPAQQFDLLRLGTLLGAGRTVAKPFALADMVNAVNQELSR"
     gene            3914..4594
                     /locus_tag="VGQ24_02830"
     CDS             3914..4594
                     /locus_tag="VGQ24_02830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453798.1"
                     /translation="MPTDKDFKRLVRGRMQKTGESYTTARAHLRKQKPTAAVSPAPAD
                     YAKLAGRSDAILKEKTGCAWERWVKALDGAKAYTWPHRKIAKYVQEKYKIPGWWAQTV
                     TVGYERIKGLRAVGQRRDGSFEANKSKTFAVPLVRLYQAFHDERTRARWLPGVDLTVR
                     MATREKSMRITWPDRTSVEVGFMRKTPRKSLVALTHAKLPDRDSATRVKQYWTERLNA
                     LEEVLEPN"
BASE COUNT          841 a         1460 c         1537 g          795 t
ORIGIN      
        1 ggtaaggcgg tacggcggta gacggtgatg tttcggtatc cggtgcgtct tgcgatccga
       61 ctttcccagc taccgcctta ccgactttcc gccttaccgc ccgcacgcca tggtgcaccg
      121 gcatgttccg gaaggcattc ccccgccgaa ttcccagggt gatttcgatc tcctggcgga
      181 gtttgtccgc cccagtgcga tccgccttat tgaccacgaa gagatcggca atttccatca
      241 cgcccgattt cagcgtctgg atgccatcgc ccgactccgg gacgagaacc agcacggtgg
      301 aatcggccat gcgcgccaca tcgagctcgg actgacccac gccaaccgtc tcgaccagga
      361 tgcggtcgaa gccggcggcg tcgagcagat cgcagacttc gcgggtagtg gttgccaggc
      421 cgccaagtga gccgcggctg gccatggatc ggatgtagac accttggtct agggcgacgg
      481 attccatgcg gatgcggtca cccaggaggg cgccgccggt gaacgggctg gtgggatcga
      541 cggcgatgac cgcgaccttg agtccgcccc cacggtagag gctgacgagg cgttcgacca
      601 ccgtggactt cccggcacca ggtggcccgg tgatgccgat gcgacgagcc cggcctagcg
      661 accggtggac ctcggcgagg agtcgctcgt aaccgggcct ggcgttctcg accactgaaa
      721 tcgcccgggc cagcgcggcg gtcttacccg ccagcagctc ggtgatcagg aggtccaggt
      781 ccatgggtga aaggtcgcca gacccggagg gtcaggcaag ccgctaggtt ggctaagaga
      841 tgcagcgctc tgcatttcaa cgggtagggc tccagcgtga actagattct taaggaatcg
      901 cacaacggtt cgctagtttg agagtgttgg tcactcgata ggccggcctg atcccggcgg
      961 caacggcagg agcgcttgca cggcggcgat gagatcggcg atgctggccg gccgtctaat
     1021 cactcgccgc caaggggccg aggctgtcgt tgcgggcagc gggtgagccg gcatcgctcg
     1081 ggccagaagc accgcagccg gatatccatg gcggcggagc aatgcgtcga ggaccgtggc
     1141 cgattcctgg tccgctaacg cggcctggtc gacgaggatg aggcgtacca gtccgcggcc
     1201 gggtgactcg gttcggtagc ggagtgccgc cgccaggcct gcagccccga gcgcgtcata
     1261 gcccgcttca cggagggcgg cccggagcaa cgcccggggc cactgctcag gcatcaccag
     1321 gagcacccgc ggtggcggcg aggtgacgga gtgcgccgac ggcatgtgac acagtgaagc
     1381 agtggatccc ctatgcgcaa gcatttcgcc gacagcgacc ccagccgctg ttgcgaggcg
     1441 gtgccctggc tgaggagtcg ccgcggctga tgcacgagcc attaggacgg aggacaagga
     1501 ggtcacgctg aaaggacggg ccgatcgtag gctgacagcg tcgcccaata aggaatcgca
     1561 ctatgtgccg ccactgggga ggattatgcg tggaactgcc tgcattcgtc tgttgatcgg
     1621 cggggtactg ctagccgcag tctcatgcac cggagatggg gaaggcacgg ggccggcctc
     1681 acccacgggg tcgttgcggg tgatccaggc ggcggagagt acgtcagcgc tggatgtcct
     1741 ggtcgacggc agcgtggtca tcaacggact cggcgccggc accatatcgt ccccggtagc
     1801 actctcagcc ggccagcgcg tcatcgaggt tcgcccggtc gggggagcaa cgagtccgaa
     1861 ccggcttcag ctcgcggtgg tcgccgacct cgattatgct gccgtcgtga tcgactcatc
     1921 cacggtgttg aatccggtag ccctgaccga cagcggagca actcctgcgg ctggaaagac
     1981 caagctgcag gtggcgaact tcgcgtcact ggccggcccg atcgatgtgt accgccgtca
     2041 acccgacttc gacgggttgg tcgatctgat gttccccttc gcttaccgcg ccgtgagtgg
     2101 ctatgtccag agcgatcccg gcgattggca ggtactggtg gcatcggagg cccgggtcga
     2161 cggagttcca cccgacgtgc cccaggatac gctgctcatc gtggagccca tctcgctcgc
     2221 cgccggccag gcagtcacgg tggtgctcct ggacaaggcg ggcgggggca ttgatgctgt
     2281 gcttgtgcgg gaccgctaga tcggcagctg ctagatggac ttatggccca tgttgcgacg
     2341 tcgccgcgct acccgacgac gctgcactac cggggacatg gggtgttgat gatctcagga
     2401 cggaacgtga gctaccggga tcggttcaag cgggggaacc tctagcatga actcccttct
     2461 ttccctcgcc cttgcgggtc tcctcggagc ttcgacccgc acgtcggggc cgccaccgaa
     2521 ggttgccgtt ctgccgatcg agctcaacaa catccacaag tccgcgcccg actctgccct
     2581 ggccggacgc atcgcccgtc tcgccgacgc cttgcgagcc cggctcgccg ccgcctgcgg
     2641 ctatgaggtc gtccccgtcg attctgccac cgaagccgct gcgcatgtca ccgatgggta
     2701 cttttatgat cacccggacg tcgcagttgg cctggcactc ggggccggcg ccgactgggt
     2761 catcatccct cgcctgaacc gagcaacggc ctgggcggcc gacctccagg cgcatgtggt
     2821 ccgggttcgc gatacggtgc tggtgagcaa ccgtattgtg gagttcaagg gcctggaact
     2881 tactccagag ctggcggccc gcctgaccga gcggggttcg gcgtggatgg ccgatcagct
     2941 gtcacaagtg atcgagctgg ctcgaagccc cacgggtgcc cgggcccgcc ggtgcccgcc
     3001 gtgaggcgta ggaaggaggc aaggaatcgc aggggggtat acacgcggcg gattcgccgc
     3061 agctaatggc agagcgttac gatgaccaat tggaatggag cacgctcatg gagccaagcg
     3121 ctcctcctga cacgcctcaa cgctgggccc gcattcttcc cgaccatcac cgggactacc
     3181 ctgtgactta tcgtgggcag tggttccgga tagtcgaaca cgacgacccc gaggtaccga
     3241 tcgagccggg ctacatctgg ctcgacctga aggggggcgc acagcgggta tcggcctcgc
     3301 actttgagat agcggagcgg accaagcggc ggattctggt ggtggatgat gaccccggca
     3361 ttcgtcagac acttcaaatc gccctcagca agacgggata tgaagtcctc gaggcccgag
     3421 acggagagga ggctactcgc ctctggcacg aggcggcccc cgatctcgtt atagccgaca
     3481 tccatatgcc gaagaagagc ggccttctcc tcattcaaga cattcgagat tatgactcct
     3541 ccacacccgt catcgtcatg acggatggcg ggccggccca gcaatttgat ctgctccggc
     3601 ttgggacact gctgggtgcg ggtcggactg tcgccaagcc gttcgccctc gccgacatgg
     3661 tgaacgcggt caatcaggag ctcagccggt aatccgagtt tcaggcgcca ctcttgcctc
     3721 agccctcggc atgatgcaca atagggcacg ggcggatgat ccgcgcccaa cctcgtcggc
     3781 cctgccccag caaggaccct cgtgaggcaa aggggggaac actcccggat ccgtctggtt
     3841 cgatcctttg ggacgccacg ggcgtcgccg ctggggggtg agtcgcctgt ggcctgacca
     3901 aaggacccta gcgatgccta ccgacaagga cttcaagcgc ctcgttcgcg ggcgcatgca
     3961 gaagacgggc gaatcctaca caaccgcccg cgctcatctc cgtaaacaaa agccaaccgc
     4021 cgccgtatcc ccagcccctg ccgattatgc caagctcgcc ggtcggagcg acgccattct
     4081 caaagagaag accggctgcg cctgggagcg ctgggtgaag gcgctcgatg gcgccaaggc
     4141 atacacctgg ccccatcgga agatcgcgaa gtacgtgcaa gagaagtaca aaatccccgg
     4201 ctggtgggcc cagaccgtca ccgtgggcta tgagcggatc aagggcctgc gcgcggtcgg
     4261 ccaacgccgg gatggctcgt tcgaggccaa caagagcaag acgttcgcgg tgccccttgt
     4321 ccggttgtac caggcctttc acgatgagcg cacccgtgcg cgctggcttc ccggcgtgga
     4381 cctgacagtc cgaatggcca cccgcgagaa gtcgatgcgg atcacctggc cggaccgcac
     4441 atcggtcgag gtggggttca tgcgcaagac gccccggaag agcttggtcg cgctcaccca
     4501 cgccaagttg ccggatcgcg actcggccac gcgcgtgaag caatattgga ccgaacggct
     4561 gaacgcgttg gaagaggtgt tggagcctaa ctaggtggag tctgaccgtg gagatcctga
     4621 ggatgatggc cat
//
LOCUS       DASYRV010000113         2208 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3345787, whole genome shotgun sequence.
ACCESSION   DASYRV010000113 DASYRV010000000
VERSION     DASYRV010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2208
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3345787"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1341)
                     /locus_tag="VGQ24_02835"
     CDS             complement(<1..1341)
                     /locus_tag="VGQ24_02835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453799.1"
                     /translation="MEEPIRAELFGIERLEQHAESLGAAHRTAGKPPREHKLLPRVRE
                     NARVLLAAYRNIAETVLAKQEITPAAEWILDNFHVVDEQLRGIRDHLPGSYYRRLPKI
                     ASGHLEGYPRVYGLAWAYVAHTDSRFELETLQRFVRAYQRVQPLAIGELWAVAIHLRV
                     ALVENLRRLSYLIVGSRQARAQADDLADRLLGLSGRPAERPEDLLRGLGDAPLSRAFA
                     VQLVQRLRGQDPSVMPAPAWLETRLSAQGTSSDEVVSQEHQAQAAANVTVRNIITSMR
                     WVSSVDWPEFFESVSLVDEVLRSAPGFAAMDFPTRNEYRARIELISRGSRHSEIEVAR
                     AAVQLAESARRENVRTSSEEVAPDVNAVLPRREIGIPGVPDRAEEDPGYYLVAGGRRA
                     FEKRMGFRVPLRIWLRRAYRAQAITRYLASIAALTALLLSGLLFLTWTAGASGWC"
     gene            complement(1701..>2208)
                     /locus_tag="VGQ24_02840"
     CDS             complement(1701..>2208)
                     /locus_tag="VGQ24_02840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453800.1"
                     /translation="NDRLNALVKFTYFYNMPTCTPSSGGPCAAGQVGAENTPTEFIQK
                     SVIAALDVNYDLTARWGIGGKYAYRLGSVSLDRINPTFFDNTAHLGILRVDFRFLQHW
                     EGLAEARMLDLPDLSQRKTGALGAIYRYIGKHLKVGAGYNFTDFSDDLTDLNYDHQGA
                     FVNLVGAY"
BASE COUNT          365 a          693 c          772 g          378 t
ORIGIN      
        1 gcaccaccca gacgcccccg cggtccaggt caggaacaga agaccggaga gcagcagcgc
       61 ggtgagtgcc gcgatgcttg ccaggtaccg ggtgatggct tgggcgcgat aggcgcggcg
      121 gagccagatc cgcaagggga cgcggaatcc catacgcttc tcgaaggccc tccggccgcc
      181 cgccacgagg taatacccgg ggtcctcctc ggcgcgatcg ggcacgcccg gaattccaat
      241 ctcgcgcctg gggagaacgg cattcacgtc cggcgccacc tcctcggacg aggtccgcac
      301 gttctcgcgg cgcgcgcttt cggccagctg cacggctgcc cgcgccacct cgatctccga
      361 atgccgcgaa ccgcgggaga ttaattcgat ccgggcccga tactcgtttc gggtcgggaa
      421 atccatggct gcgaatccag gagcggagcg gaggacttcg tccacgaggc tgacgctctc
      481 gaagaactcg ggccagtcga ccgaggacac ccagcgcatg ctggtgatga tgttccgcac
      541 ggtgacgttt gccgcggcct gagcctgatg ttcctgggac accacctcgt cggacgaggt
      601 cccctgggcg ctcaatctcg tctcgagcca ggccggggct ggcatgacgg aagggtcctg
      661 gccccgaagc cgctggacga gctgcaccgc aaacgcgcgc gacaggggag cgtcgccgag
      721 accgcgcagg aggtcctccg gccgctccgc aggacggccg ctcagaccca gcaggcggtc
      781 cgccagatcg tcggcctgcg cccgcgcctg gcgggagccg acgatcagat aggagaggcg
      841 ccgcaggttc tccacgagag ccactcgcag atggatggcg accgcccaga gctctccgat
      901 ggccagcggc tggacgcgct ggtaggcgcg gacgaatcgc tgaagtgtct ccagctcgaa
      961 gcggctgtcc gtatgggcca cgtaggccca ggcaaggcca tagacgcgcg ggtacccctc
     1021 gaggtggccc gaggcgatct tcggcagccg gcggtagtag ctcccgggga ggtggtcccg
     1081 gattccccgg agctgttcgt ccacgacgtg gaagttgtcg aggatccatt ccgcggcggg
     1141 cgtgatctct tgcttcgcta ggaccgtctc cgcgatgttc cggtacgcgg ccagcagcac
     1201 gcgtgcgttc tcacgcaccc tcggaaggag tttgtgttcc ctgggtggct tcccggcggt
     1261 gcgatgggcc gcgcccaggc tctcggcatg ttgctcgaga cgttcgatgc cgaagagctc
     1321 ggcgcgaatc ggctcttcca ccggaaaagg actgtcgatg gcggcggcgg tgaccagcag
     1381 attgagcttt cattacggga tgtcgagagg atgcttccgt tcccccgacc ccgagaggct
     1441 gttgggttgg atcgctttca gacggccatg ggccttcctt ccggtgacgg ccggcagccg
     1501 aggccatggg accccgtcgc cggtcgcgct tcacctggga agccgcccat tgtactcgaa
     1561 gggcccgggt tgaacctggc cgactatggt gcgtgtttca agccggggtt cggaccgaga
     1621 tcgatggttc aggagcagct gctaagggga gggaactggc cggcgtttcg atcgtagccg
     1681 atgtgaacgc tacgcgggga tcagtaggct ccgacgagat tgacgaatgc gccctggtgg
     1741 tcgtagttga ggtccgtcag gtcgtcggag aagtcggtga agttgtagcc ggcgccgact
     1801 ttcaggtgct tgccgatgta gcggtagatg gcgccgagcg cgccggtctt gcgctggctg
     1861 aggtccggaa gatcgagcat gcgcgcctcg gcaaggccct cccagtgctg gaggaaccgg
     1921 aagtccacgc gcaggatccc gaggtgcgcg gtgttgtcga agaaggtcgg attgatgcga
     1981 tcgaggctca ccgatcccag gcggtaggcg tacttcccgc cgatgcccca cctggccgtc
     2041 aagtcgtagt tcacgtccag ggccgcgatg acgctcttct ggatgaactc ggtcggggta
     2101 ttctccgctc ccacctgccc cgcggcgcag ggcccgccgg aggacggcgt gcaggtcggc
     2161 atgttgtaga agtaggtgaa ctttaccaaa gcgttcagcc ggtcgttc
//
LOCUS       DASYRV010000114         1530 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2515200, whole genome shotgun sequence.
ACCESSION   DASYRV010000114 DASYRV010000000
VERSION     DASYRV010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2515200"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..267)
                     /locus_tag="VGQ24_02845"
     CDS             complement(<1..267)
                     /locus_tag="VGQ24_02845"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEV8453801.1"
                     /translation="MGPTGRNAGEGADMSDVFALTEDQQLFRREWRRLFEDKFTERAA
                     EIDRTGEFPWDNHKVLTEAGLVGLNIPEAYGGGGADSVTHCILVE"
     gene            complement(376..1152)
                     /locus_tag="VGQ24_02850"
     CDS             complement(376..1152)
                     /locus_tag="VGQ24_02850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453802.1"
                     /translation="MGKLDWVHRDRIGWADIDQDGLLKFSSMIRFVSAGYAGMFPLLM
                     EGSRAEYFATHGLQPIVRYVEMAREPDGAKLDAGLSVRFTVRLGFALDRRSESRRYGG
                     YDTIRLVDEHGDTLGRWTQHWLWFVPNTGTLLHEPAPGFNVDQSEALPSTEAPPRSPM
                     GAEGGRFRWTPRETDSNHHVSASAYLERAENTLADAKFDTYRLHRASMWFRRPSLLGD
                     LMTSSFQELDDDTLLVLVTRAESDELCVTVRLSGSATSRP"
     gene            complement(1297..>1530)
                     /locus_tag="VGQ24_02855"
     CDS             complement(1297..>1530)
                     /locus_tag="VGQ24_02855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453803.1"
                     /translation="RDNLRPTARPAWRHRRQARLALPGVRLAGLLGGGIGELVKDHLP
                     TLTITKRNRSQRPVKNVPERSPGWLLEGVEADD"
BASE COUNT          245 a          521 c          492 g          272 t
ORIGIN      
        1 ctcgaccagg atgcagtggg tgaccgagtc ggcgccgccg ccgccgtagg cctcggggat
       61 gttgaggccg accaggccgg cctcggtgag caccttgtgg ttgtcccagg ggaactcgcc
      121 ggtccggtcg atctcggccg cgcgctcggt gaacttgtcc tcgaacagcc gccgccattc
      181 cctgcggaac agctgctggt cctcggtgag ggcgaacacg tccgacatgt cggcaccttc
      241 ccctgcgttg cggccggtgg ggcccattct agggtcctcg aaacgctcca gaggactctg
      301 gtggccttgc ggtgctggcg gcggccgtcc gggcgcggcg tgccgaacag ctcccggcag
      361 gatgggccaa gcgccctacg gtcgggaggt ggcgcttccg ctcaagcgca cggtcacgca
      421 aagctcgtcg gactccgcac gcgttaccag cacgaggagc gtgtcatcat ccagctcctg
      481 gaaggagctg gtcatgaggt ctccgagcag ggacgggcgt cggaaccaca tgctggcgcg
      541 gtgaagcctg taggtgtcga actttgcatc cgccagggtg ttctccgcgc gctccaggta
      601 tgccgaggcg gagacgtggt ggttgctatc ggtctcgcga ggcgtccagc gaaaccgacc
      661 gccctccgct cccatcggcg agcggggcgg tgcttccgtc gatggcaacg cttcggactg
      721 gtcaacgttg aatcccggtg cgggctcgtg gagcagcgtg cccgtattcg gaacgaacca
      781 cagccaatgt tgggtccaac ggccgagcgt gtctccgtgc tcatctacca gtcggatcgt
      841 gtcgtagcca ccgtagcggc gcgactcgct acggcggtca agcgcgaagc ccagccgaac
      901 cgtgaagcgc acggaaagcc ctgcgtccag ctttgcgccg tctggctcac gtgccatctc
      961 cacatacctc acgatgggct gcagcccgtg ggtagcgaag tactcagcac gcgagccctc
     1021 catcaggagg ggaaacatgc cggcgtagcc cgctgagacg aaacggatca tcgaggagaa
     1081 cttcagaagg ccgtcctggt cgatgtctgc ccacccgatc cggtcccggt gcacccaatc
     1141 cagcttcccc aatggtctcc tcgctgatgt gaccgctcga cacgacgctc ggtcggctca
     1201 tgaccgtgaa accagcgctg cggataccag gatcttcagg ccgccacatc gtcgcccgcg
     1261 atcgtatcgc ttctacgcct ggcgatgctg gcctgctcag tcatctgctt caacaccctc
     1321 cagcagccac cctggtgacc gctccggaac gttcttcacg gggcgctggc tcctgttcct
     1381 cttcgtgatc gtcaatgtcg ggaggtggtc cttcaccaac tcgccgatcc cgccccctaa
     1441 cagcccggcc aaccgcaccc ctggcagggc aaggcgcgct tggcggcgat gtcgccatgc
     1501 cggccgcgcg gtcggcctca ggttgtcgcg
//
LOCUS       DASYRV010000115         2544 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3575632, whole genome shotgun sequence.
ACCESSION   DASYRV010000115 DASYRV010000000
VERSION     DASYRV010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2544
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3575632"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..1223)
                     /locus_tag="VGQ24_02860"
     CDS             complement(93..1223)
                     /locus_tag="VGQ24_02860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453804.1"
                     /translation="MNHPNRRASLAGATLACVALTLQGCGVSTSTTNLSTGPEPVELT
                     MTPAVVSAGSSVQVRVVSPSADSILVQSDDGIDRYSGVGGTLRARLQSDFGDTLSEAR
                     FAVRQNGRLFDVLKKPMKVVVCRKNTCREYFHELAIQLPERNERSVAVTGGWSTAFTK
                     RAVTARDKSVLLKEALNNTVWNVQAELARGGLSARLQGFYGADEKGGSLDVSHEIKRV
                     GDGLSYGLAMHLAATHAGWLPTDQNPVLAHGTAYRASIGPSVMIKGLTASSQLGIYTD
                     GRETLQEVSTFVSLNGGLTEVRNPVTVTLEKTFAFGGEPMIPRRRDQLERLTIGLDLV
                     RNFALRLGMTNHRSAWPIAGGTSDLRASEVYYTVGGQYTISW"
     gene            1488..2159
                     /locus_tag="VGQ24_02865"
     CDS             1488..2159
                     /locus_tag="VGQ24_02865"
                     /inference="COORDINATES: protein motif:HMM:TIGR03914.1"
                     /note="This protein belongs to the uracil DNA glycosylase
                     superfamily, members of which act in excision repair of
                     DNA. However, it belongs more specifically to UdgX branch,
                     whose founding member was found to bind uracil in DNA
                     (where it does not belong), without cleaving it, appears
                     to promote DNA repair by a pathway involving RecA, rather
                     than base excision; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UdgX family uracil-DNA binding protein"
                     /protein_id="HEV8453805.1"
                     /translation="MTRLRAGTTAATGSAADFIPPRPTLTKLREAAGSCRGCHLWMHA
                     TQTVFGEGPRTAEVMLVGEQPGDLEDRAGHPFVGPAGKLLDTGLMQAGIDRSRVYVTN
                     SVKHFKFVTIERGRRLHKKPNAAEVRACHPWLLEEIRLIKPRVIVALGATAAQALLGK
                     QFRVTQDRGKPMPSALAEAVVATVHPSAVLRAPDDTRDEARQEFIADLKRVADYLNRS
                     PSARA"
     gene            2188..>2544
                     /locus_tag="VGQ24_02870"
     CDS             2188..>2544
                     /locus_tag="VGQ24_02870"
                     /inference="COORDINATES: protein motif:HMM:NF012570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HEV8453806.1"
                     /translation="MVIGRLLARRGILSKREQEIRAREQELLARLATALERFGSDVAA
                     EDLRRFQEAREQLTGLFLLVIAGEFNSGKSSFINALLGERVLPEGVTPTTDRINVLRH
                     GSEVSELLRAAYLLERT"
BASE COUNT          446 a          854 c          797 g          447 t
ORIGIN      
        1 cctccagggc tgttgggatg ccaaaaaggg ccgaagcctg atggcttcag ccctacgtgc
       61 ccggagcagc cgccccggct ttgtcccccc ctctaccagc tgatcgtgta ctgacctccg
      121 accgtgtagt agacctcgct ggcccgtagg tcgctggtcc cgccagcgat gggccaggcg
      181 ctccgatggt tggtcatgcc cagcctgagt gcgaagtttc gcactagatc caggccgatg
      241 gtcagccgct cgagctggtc ccgacggcgg ggaatcatcg gctccccacc aaaggcaaag
      301 gtcttttcca gggtgacggt taccgggttc cgcacctcgg tcaggccacc gttcagcgac
      361 acgaaggtgc tgacttcctg gagggtctcc cgcccatcgg tgtagatccc cagctgggag
      421 ctggcggtca gccctttgat catcacgctc ggcccgatgc tcgcccgata ggccgtcccg
      481 tgagccagca ccgggttttg gtcggtggga agccacccgg cgtgggtcgc ggccaggtgc
      541 atggccagac cgtaactcag cccatctccg acccgcttga tctcatgcga gacatcgagg
      601 gagcccccct tctcgtcggc tccatagaag ccctgcagcc gggcgctcag gccacctctc
      661 gccaactcgg cctggacatt ccagaccgtg ttattcagcg cctccttcag caggaccgac
      721 ttgtcgcgag cggtgaccgc acgtttggtg aacgcagtac tccaaccacc agtcaccgcc
      781 accgaccgct cattccgctc cggtagttgt atggcgagct cgtgaaagta ttcccggcac
      841 gtattcttac ggcagacgac caccttcatc ggcttcttga gcacgtcgaa caggcggccg
      901 ttctgccgca cggcaaagcg ggcttctgat agcgtgtcgc cgaaatcgct ctgcagcctg
      961 gcgcgaagag tcccgccgac gcctgaatac cggtcgatgc cgtcatcgga ttgcacgaga
     1021 atgctgtcgg ccgacggact gactacccga acttgcaccg agctaccggc gctgaccacg
     1081 gccggtgtca tggtgagctc gaccggttcg gggccggtgg agaggttggt cgtcgaggtg
     1141 gaaacgccac aaccctggag agtcagcgcc acgcacgcca gcgtggcgcc agccagggag
     1201 gccctacgat tgggatgatt cattgaggcc gccgctgctg atcgtacgga gcttcaccgc
     1261 cgaagcaaaa aggcccaact tgggcggcaa cccacggacg tacgcgcatg ttgttgcgct
     1321 gtgccccacg aggaggcgca aggagcatac ctcgacgaag cggctcgatt gtgtcctggg
     1381 atggcgggcc gaagcgctcc cgccgtggtc aactatatcc cttcaatttc ccgaccgcta
     1441 gtgaccgggg ccacttcatc tactcagcag gtctgctaat gtgatctatg acccgactcc
     1501 gcgccgggac cactgccgcc accggatccg ctgcggactt cattccgccg aggcccacgc
     1561 tgacaaagct gcgtgaggca gcggggagct gccgcggctg ccacctctgg atgcacgcga
     1621 cgcagacggt gttcggtgag ggtccccgca ctgccgaggt catgctggtc ggcgagcagc
     1681 cgggtgatct cgaggaccgc gcagggcacc cattcgtcgg tcctgccggg aagctgctcg
     1741 acaccgggct aatgcaggcc ggcatcgatc gcagcagggt gtacgtgaca aactcggtca
     1801 aacacttcaa gttcgtcacc atcgagcggg gccgccggct gcacaagaag ccgaatgcgg
     1861 ctgaagtccg cgcctgccat ccctggcttc tggaggaaat ccgtctgatc aagccgcggg
     1921 tgatcgtcgc actcggcgcc accgccgccc aggcgttgct cgggaaacag ttccgggtca
     1981 ctcaggatcg aggaaaaccg atgccatccg ccctggccga ggcggtcgtt gctacggtgc
     2041 atccgtcggc cgtcttgcgg gcgcccgacg acacacggga cgaagcgagg caggagttca
     2101 ttgcggatct gaagcgggtg gcggactatc tgaaccgctc accttccgct cgggcttgaa
     2161 cgcgcaacag agtcccggga ccttaccatg gtgatcggca ggctgctggc ccgcaggggc
     2221 atcctctcca agcgggagca ggagattcgc gcccgggagc aggagctgct cgcgcgcctg
     2281 gccaccgcgc tcgaacgctt cggctccgac gtcgccgccg aggaccttcg ccgatttcag
     2341 gaggcccgcg agcagctcac cggtctcttc ctgctggtga tcgcaggcga gttcaattcc
     2401 ggcaaatcca gcttcatcaa cgcgctactc ggcgagcgag tcctgcccga gggcgtcacc
     2461 cccaccaccg accggatcaa cgttctccgg catggttccg aggtgtcgga gctgctccgc
     2521 gcggcgtacc tgctggagcg cacc
//
LOCUS       DASYRV010000116         5220 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_877045, whole genome shotgun sequence.
ACCESSION   DASYRV010000116 DASYRV010000000
VERSION     DASYRV010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5220
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_877045"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="VGQ24_02875"
     CDS             <1..190
                     /locus_tag="VGQ24_02875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HEV8453807.1"
                     /translation="ERPLEDDMVAEVNGVRVFVDGFSAQYLTGVTIDYVSSMQGSGFT
                     FSNPNASGGCGCGSSFTA"
     gene            310..1800
                     /locus_tag="VGQ24_02880"
     CDS             310..1800
                     /locus_tag="VGQ24_02880"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HEV8453808.1"
                     /translation="MSHPDLVVVVLYFAFTLGVGLWVARHQRSASDYFLGARNLPAWA
                     ILLSIVATETSALTVISVPGIGARGDLTFLQLTFGYLVGRIGVAVWLLPGYFRGDQET
                     AYARLESRFGVGTRRLTSTVFLVTRFLGDAVRVFASAIPLALVTGWSIPTSIVVMGLI
                     TMIYTWFGGFKAVVWTDVLQLCVYLAGGIGALLVAWDIAGGAGTALELARHAGKLKFI
                     DPAINFTRTYTLLGGLVGGALLSAASHGTDHLIVQRLLATRSLRDARIALVGSGIMVI
                     GQFALFLLVGSAIWAAGLAPESVPGDELFPSFVLHHLPAGLAGLVVAGILAAAMGTHS
                     SAINSLASSATHDLYASWSGQRDPVRLLRVGRLLSAVWASALVVGALLFHFAATGKDT
                     PVVVLALSIASVTYGPLLGTYLLAGRWPRARGRDVVGAVAITVAVMLVVVFARRLSGH
                     SDLEWLAPLGRLAWPWYVPLGTLLAVCTGIALSYLPHGAPKATSRR"
     gene            1826..2728
                     /locus_tag="VGQ24_02885"
     CDS             1826..2728
                     /locus_tag="VGQ24_02885"
                     /inference="COORDINATES: protein motif:HMM:NF013986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
                     /protein_id="HEV8453809.1"
                     /translation="MPRVLIGADVGGTKTAVAVSRDGKIVGRADGPGAAVRPGRALAS
                     SSTIAEVVRQALSSAGLLIGDVLLVGAAGVGREPERDELRKALRGENVASSVVVTTDI
                     EIALAAAFADGPGIVVSAGTGSVAVGRDRTGKQHRIGGYGWQMGDEGSGYAIGRASLG
                     AVSRAVDGRSPKTALSDRLLRATRSDDYDELVRWAAGASPAEVAALAPHVLAVAAAGD
                     PLAQGIADYAARELSQLAICLVPKMDIAPPIPVAVTGGLLGTDQPLRKTLLAKLAEEP
                     VFQPTDNPVDAVAGALRLADSGTP"
     gene            complement(2730..4277)
                     /locus_tag="VGQ24_02890"
     CDS             complement(2730..4277)
                     /locus_tag="VGQ24_02890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEV8453810.1"
                     /translation="MSRLFLRKSIQDCEDDILERGGLRRSLNKWHLTALGVGATIGAG
                     IFATTGTAIVGDPLRPGAGPAIVISFLLTALTCGFAALCYAEFAAMVPISGSAYTYAY
                     ASLGELVAWIIGWDLIIEYAVGNIGVAIGWSGYFRELLSHFGISLPAWLATDFRSAHM
                     AAEAVAAGSASPSAQYLASALSNAPHVLGFPVIANLPAFLIVALITVVLVIGIRESAN
                     SNNAMVLLKIGIILFFCAVGATLVKPENWNNPALGGFAPNGWAGISAGAAIIFFSYIG
                     FDATSTAAEEAKDPAKDMPFGIIMSLIVCTVLYIILALVMTGMAPWNQLGTPEPMITA
                     LALADGSPRLLSISRLIVSLGAVIAMSSVLLVFQLGQPRIFMSMSRDGLLPPFLSRVH
                     RRFKTPYIGTIITGIFVATFAAFANIAEVVDLTNIGTLFAFVLVSAGVIVLRRLEPDR
                     PRPFRAPLVPLTPIISIVACLYLMLQLPRLTWIRFGVWLLLGLLVYLFYGMRHSRLRL
                     RAEQRER"
     gene            complement(4355..>5220)
                     /locus_tag="VGQ24_02895"
     CDS             complement(4355..>5220)
                     /locus_tag="VGQ24_02895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453811.1"
                     /translation="RAFGLAPDVSPTDVPTRNGRLSFWLRLPRMAEGTTRAPVVPTLR
                     LPNSRSRYAGLAASIAVHLLLLALLVSYGERLWSRTLAPGDAALLGGSSPRGGGGGNR
                     VAYITLPSLPEPAPTVAKAPPPVRPPKAVAVAIPDPVPTAPPAAAVVDTAPAEPGAPA
                     AGSSAPGHGVGPPAGGAGGAGQGQGSGADSGSGGGRARPPEPRDMAFPFDNPPKELRG
                     VSLSVTFWVRMDGRVERYQVVPEIKDRDYARKFDEVMRAFRFTPARAPDGTRVAGTTK
                     ISFTLPGKSSS"
BASE COUNT          894 a         1656 c         1756 g          914 t
ORIGIN      
        1 agagcgcccg ctggaagatg acatggtggc cgaggtgaac ggcgtgcggg tcttcgtcga
       61 tgggttcagt gcccagtatc tcacgggggt caccatcgat tacgtgagct cgatgcaggg
      121 ctccggcttc accttcagca accccaatgc cagtggtggg tgcggttgcg gcagtagctt
      181 caccgcctga aaaaccgtaa gcagtgagcg gtaagaagtg agccgggcgg ccgtgagaag
      241 atctctcatc tggccgccct tcttacgtct atcccgctta ccgctcaccg cttaccgctt
      301 accccgccgt tgagtcatcc cgaccttgtt gtcgtcgttc tctacttcgc ctttaccctg
      361 ggcgtcgggc tctgggtcgc tcgccatcag cgaagcgcgt ccgactattt tctcggcgcc
      421 cgcaacctgc cggcatgggc catcctgctc tccatcgtcg ccaccgagac ctcggcactc
      481 acggtaatat cggtcccagg catcggggca cgcggtgacc tcaccttcct tcagctcacc
      541 ttcggatatc tggtagggcg catcggtgtg gctgtgtggc ttcttccggg atatttccgg
      601 ggcgatcagg agaccgcgta tgccaggctg gaatcccgct tcggcgtggg cacccggcgg
      661 ctcacctcca ccgtttttct ggtgacccgc ttcctcggcg acgcggtccg ggtattcgcg
      721 agtgctattc cactggctct ggtgaccggt tggagtattc cgacctcgat cgtcgtgatg
      781 ggcctgatca ccatgatcta cacctggttc ggcggattca aggcggtggt ctggaccgat
      841 gtgcttcaac tttgcgtgta cttggctggt gggatcggcg ccttgctcgt ggcctgggat
      901 attgcagggg gcgctggtac agctcttgag ctcgcgcggc atgcgggcaa gctgaaattc
      961 atcgatccag cgatcaactt caccagaacc tacactctcc tgggaggtct cgtcgggggg
     1021 gcgctgctgt ccgctgcctc acacggaacg gatcatctga tcgtgcagcg gctgctggcg
     1081 acccgctccc ttcgtgacgc acgcatcgcg ctggtcgggt cggggataat ggtgatcggt
     1141 caattcgctc tgtttctgct ggtgggctcc gcgatctggg ccgcgggact cgcaccggag
     1201 agcgttcccg gcgatgagct gtttccttcc ttcgtgctgc accatctgcc cgccggcctg
     1261 gcgggactcg tggtcgccgg tattctcgcg gctgcaatgg gaacccacag ctccgcaatc
     1321 aactcgctcg cctcttcggc gacgcacgat ctctacgcat cctggagcgg tcaacgggac
     1381 ccggttcgcc tcctgcgggt agggcggctg ttatcggcag tgtgggcctc ggccctcgtg
     1441 gtgggagcct tgctctttca tttcgccgcc accggcaagg acacacccgt tgtcgttctg
     1501 gcgctctcga ttgcgtcggt gacgtatggg ccgctgctcg gcacctatct cctggcgggt
     1561 cgctggcccc gggcacgcgg ccgggacgtc gtcggtgctg tcgcgatcac cgtcgcggtt
     1621 atgctcgttg tagtcttcgc ccgccgcctg tccggccatt cagacctgga atggctggcg
     1681 cctctaggac gccttgcctg gccatggtac gtcccgctag gcactctgct ggcggtctgc
     1741 accgggatag ccctgagcta tcttccccac ggcgcaccaa aagctacgag ccgcagataa
     1801 acgcagatgt gtcgcgagtc atgagatgcc gagagttctg atcggagccg atgtaggggg
     1861 gaccaagact gccgttgccg tgtcccggga cgggaagatc gtcgggcggg ccgacggtcc
     1921 cggggccgcg gtacgtccag ggcgagccct ggcctcctcg agcacgattg cggaggtcgt
     1981 gcgccaggca ctctcgtccg ccggcctgct gatcggggac gtgctgctgg tcggcgcggc
     2041 cggcgtaggc cgggagccgg agcgcgacga gcttcgaaag gcgctccggg gtgagaacgt
     2101 ggcttcgagc gtggtggtga ccacggatat cgagatcgct ctcgcggcag cgttcgccga
     2161 tgggccgggg atcgtggtaa gcgcgggtac tggaagcgtg gctgtcggac gggaccgaac
     2221 cgggaagcag caccgaatcg gaggctacgg ctggcagatg ggcgatgaag ggagtggcta
     2281 cgcgatcgga cgtgcctcgc tcggcgcggt gagccgggcg gtggatggaa ggagccccaa
     2341 gacggcgttg agtgaccggc tcctcagagc cacgcgcagc gatgactacg atgagctcgt
     2401 ccgctgggcc gcgggtgctt cgccggccga agtcgccgcg ctcgcgccac acgtactggc
     2461 ggtggccgcc gccggcgatc cgctggcgca aggcattgcc gactatgccg cgcgggagct
     2521 ctcccagctg gccatctgtc tggtaccgaa gatggacatc gccccgccga ttccggtcgc
     2581 cgtcaccggc ggactcctcg gcaccgacca gccgctgcgt aagacccttc tcgccaagct
     2641 cgccgaggag cctgtcttcc agccgacgga caatccggtc gatgctgtcg ccggcgcgct
     2701 ccgcctggcg gactcaggca cgccgtagtt cagcgctctc tttgctccgc ccgcagcctc
     2761 agcctgctgt gccgcatccc gtagaacagg tagaccaaga gaccgagcag aagccagacg
     2821 ccgaagcgga tccaggtgag cctggggagc tggagcatca gatacaggca ggcaacgatc
     2881 gagatgatcg gcgtgagcgg taccagcggg gcccggaacg gacgaggccg gtcgggctcg
     2941 agccgccgca ggacgatgac gcccgccgat accagcacga aggcgaacag ggtaccgatg
     3001 ttggtgagat ccaccacctc cgcgatgttg gcgaaggcgg caaatgtcgc cacgaagatt
     3061 cccgtgatga tcgtgccgat gtacggtgtc ttgaagcggc gatgcactcg cgacagaaac
     3121 ggcgggagca ggccgtcacg cgacatggac atgaagattc gcggctgacc cagctgaaag
     3181 accagcaaca cgctgctcat ggcgatcacc gcgccgagtg agacgatcaa tcgggagatc
     3241 gacagcagtc taggtgaccc gtcggcaagt gccagcgcgg tgatcatcgg ttctggcgtg
     3301 ccgagctggt tccacggcgc cataccggtc atcaccagcg ccagaatgat gtagagcacg
     3361 gtacagacga tcaggctcat gatgatgccg aacggcatat ccttcgcggg gtccttggcc
     3421 tcctccgcgg cggtggaggt ggcgtcgaat cctatgtagc tgaagaagat gatcgccgca
     3481 ccggcgctga tgccggccca tccattcggc gcaaatccgc cgagcgccgg gttgttccag
     3541 ttctccggct tgaccagcgt agcgccgacg gcgcagaaga acaggatgat accgatcttg
     3601 agcagcacca tggcattgtt cgagttggcc gattcccgga taccgatcac cagcacgacc
     3661 gtaatcaatg ccacaatgag gaaggcaggc agattggcaa tgacgggaaa tcccaacacg
     3721 tgcggcgcgt tcgagagtgc ggacgcgaga tactgagccg acgggctggc cgacccggcg
     3781 gccaccgcct cggcggccat atgcgcggac cggaagtccg tcgcgagcca ggccggtagc
     3841 gagattccaa aatgggaaag gagctcgcgg aagtagccgg accagccgat cgccacgccg
     3901 atgttgccca ccgcgtactc gatgatcagg tcccacccga tgatccaggc caccaactca
     3961 ccgagcgagg catacgcgta ggtgtaggcg gagcccgaga tcggaaccat ggcagcgaat
     4021 tcggcgtagc agagcgccgc aaagccgcag gtgagcgccg tcaggaggaa ggagatgacg
     4081 atggccggtc cggcgccggg ccggagcgga tctcccacga tggccgtgcc ggtggtggcg
     4141 aagatcccgg cgccgatcgt ggcgcctacc ccgagggcag tcaggtgcca cttgttcagc
     4201 gagcgtcgca ggccgccgcg ctccaggatg tcgtcttcac aatcctggat ggatttccgg
     4261 aggaagagcc ggctcatagt tcctcgaaag cgtggagcca ccctgccctc gcgcggtctc
     4321 ggggacgagg agagcgggaa ggaagtggca gccgctacga gctgctcttt cccggaaggg
     4381 tgaatgaaat cttggttgtt ccggctacgc gagtaccatc gggcgcgcgc gcaggtgtga
     4441 agcggaacgc gcgcatgact tcgtcgaact tcctggcgta gtcgcggtcc ttgatctccg
     4501 gtacgacctg atagcgctcg acgcgaccgt ccatccgaac ccagaacgtc acgctgaggg
     4561 agacgccgcg cagctccttc ggcggattgt caaaggggaa ggccatgtcg cgcggctcgg
     4621 gcggccgagc gcggcctcca ccggagcccg aatcggcacc gctgccctgg ccttgccccg
     4681 cgcctccagc tcctccggcc ggtggcccca cgccatgacc cggtgcgctc gatcccgccg
     4741 ccggggcgcc cggctcagcc ggagccgtgt cgaccaccgc tgctgcgggt ggcgctgttg
     4801 gtaccgggtc cgggatcgcc acagccacag ctttaggagg gcgcactggc ggcggtgctt
     4861 ttgcgaccgt cggcgccggc tccgggagcg aaggcagggt aatatacgcc acccggttac
     4921 ccccaccacc gccgcgcggg ctgctcccac cgagcagtgc agcatcgccg ggtgctagcg
     4981 tgcggctcca caaccgctca ccgtaactca ccagcagcgc gaggagcagg agatgcaccg
     5041 cgatcgaggc ggccaggccg gcataccggc tccgggagtt aggaagacga agggtgggga
     5101 cgacaggtgc gcgcgtagtt ccctcggcca tacgtggaag acgaagccaa aaagataacc
     5161 gcccgtttcg ggtcgggacg tctgtgggag agacgtcagg agcgagccca aacgcacgcg
//
LOCUS       DASYRV010000117         5723 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_252815, whole genome shotgun sequence.
ACCESSION   DASYRV010000117 DASYRV010000000
VERSION     DASYRV010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5723
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_252815"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..608
                     /locus_tag="VGQ24_02900"
     CDS             <1..608
                     /locus_tag="VGQ24_02900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEV8453812.1"
                     /translation="EQIRQLGGEVRQVSLPNSAYAVPTYYIIAPAEAAANLARYDGVR
                     YGRRRVGPEGDIRALYRTTRGEGFGEEVRRRILVGTYVLSAGYYEAYYKKAQQVRALI
                     AEDFRRVFDSGIDLLLTPTTPTPAFKAGEKTEDPVAMYLADVFVCSMSLAGLPAMSLP
                     VGRSEGLPIGAQVVAPYFGEERMLAAAQVLERTLDPLAEVR"
     gene            608..2050
                     /gene="gatB"
                     /locus_tag="VGQ24_02905"
     CDS             608..2050
                     /gene="gatB"
                     /locus_tag="VGQ24_02905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEV8453813.1"
                     /translation="MAWETVIGLEVHVQLRTRTKMFCGNRTTFGDPPNTNVCPVCLGL
                     PGALPVPNAEAIRLAVRGALALGCTVHETSVFARKNYFYPDLPKGYQISQFDRPLASG
                     GSVSFDSPDRGRIQVGITRLHVEEDAGKLLHDRFPGRTAVDLNRAGTPLAEIVSEPDL
                     RSPAEARAYLTTLRQILVYAGVSECSMEQGSLRVDANLSIRPAGTSKLGTKTEVKNMN
                     SFANVERALEAERARQIALAESGRRVEQVTLLFNAGTGQVKPTRSKEESHDYRYFPDP
                     DLPPLVLARAWIAEQQAALPELPDAKRARLESAYALPAYDAKVIASEAALAHYFEAVV
                     RAGSDPKAAANWVMGDVMTTYNESGAFAVTAERLAQLIGLVRDGTVSHQAAKRVYTEL
                     TRSPGEDARVAAERLGLVQVSDQGSLSGWVDEVIAAHPGEVARFRGGEAKLMGFFVGQ
                     VMKLSKGKADPKGVQPVLQERLQQTAGTKP"
     gene            complement(2165..3013)
                     /locus_tag="VGQ24_02910"
     CDS             complement(2165..3013)
                     /locus_tag="VGQ24_02910"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEV8453814.1"
                     /translation="MPQVTLTTEPAMLQEGTVGWLRVGTREGVVVSGGEVAGEPLHFE
                     PFRDSTFRGLVAVPVEAPDSLVVSLFLERPGRSDTLPIFVPVRRAGYSSEMLSVPPAY
                     ARPDSAATVRIQSEIERSRQVSRSSQGKPRIWRGAFRLPRPSRITSRFGTARVYNGEV
                     QSRHLGTDFAGVTGAPVRAAGRGVVALVADFYLAGHAVYIDHGAGLVTGYFHLSRVDV
                     RQGDTVLAGQRIGAVGRSGRVTGPHLHWVARYGAISVDPMSLLELGRTSPGHGTSGES
                     KRADGR"
     gene            complement(3124..4092)
                     /locus_tag="VGQ24_02915"
     CDS             complement(3124..4092)
                     /locus_tag="VGQ24_02915"
                     /inference="COORDINATES: protein motif:HMM:NF013078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc dependent phospholipase C family protein"
                     /protein_id="HEV8453815.1"
                     /translation="MTFRRLTLAVVGVGLILLLVPHQAHAWTPGTHIYLGESVLANLS
                     FLPAGVAHLLRAFPFDFLYGNIAADSSIAKHYAPLGRHCHYWHVGQEIHDLAATDALR
                     AFGLGYLSHLAADTIAHNYFVPRQLMLTSSTAAVGHSYWETRVEAHLGDAYAKVAKDV
                     IRLDHAGADAHLDRIIAPTIFSVRTNRRLFRGMVHLTETTSWQRASQVAREYSRWQLS
                     DDDVERHLGLSFDFMMELLGESAVSARHLDPSGERPLKTAKEMRRRVMREAGRRDTAS
                     LQSAANEQFGLPERAFVFWSKLQRKLPWRAPEGSAPSPNLLVSGDR"
     gene            complement(4092..4565)
                     /locus_tag="VGQ24_02920"
     CDS             complement(4092..4565)
                     /locus_tag="VGQ24_02920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453816.1"
                     /translation="MMALVQVSASPEWVGPTMAISLAVIALSFLGIALAMAIAALKLA
                     GQVKKVGTLVAGLQDDVARTLKAVRRLTEQGQDVMVVVRQETGAFAQTARRLRRKLVR
                     AADRVEVKLEELETLYDVVHDEVEGTALDVAAALRSVRRGNGMLGRVRRLLVPSR"
     gene            4709..>5723
                     /locus_tag="VGQ24_02925"
     CDS             4709..>5723
                     /locus_tag="VGQ24_02925"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEV8453817.1"
                     /translation="MPPRFLVQGGRPLRGTVRPAGNKNAALPILAATLLADGPVELDN
                     IPRIRDVETMLALLVDLGAAAEWTGAHSLRVDTRSVKPKPLDPALCAKIRASILLAGP
                     LLARFGSVTLPPPGGDVIGRRRVDTHFLALEHLGASVMVGDRYELEAKELKGDDIFLD
                     EPSVTGTENALMAAVMAKGRTVLRNAACEPHVQDLARVLVAMGAEIAGIGSNIYTIEG
                     GRPLMGTSYTIGPDHIEIGSFIGLAAVTNGDVTIEPVRSEDLRSILLGFERLGIRPRV
                     EGTRLSVSPGQERRIRPDLGGHVPKLEDGPWPAFPADVMSTTIVTATQCSGMLLVFEK
                     MFES"
BASE COUNT         1003 a         1882 c         1920 g          918 t
ORIGIN      
        1 ccgagcagat ccggcagctc ggtggagagg tccgccaggt ctcactgccc aactcggcct
       61 acgcggtgcc gacgtactac atcatcgcgc cggcggaagc agcagcgaat ctggcgcggt
      121 atgacggcgt tcgttatggc aggcggcggg ttggacccga gggagatatc cgcgcactgt
      181 atcgcaccac ccggggcgaa gggttcggtg aggaagtgcg ccgcaggatt ctggtcggca
      241 cctacgtgct gagcgcgggt tactatgagg cctactataa gaaggctcag caggtccgcg
      301 cactgatcgc ggaggatttc cgccgggtct tcgactccgg tatcgacctg ctcctcaccc
      361 cgaccacgcc aacaccggcg ttcaaggcgg gggagaagac tgaagatccg gtggcgatgt
      421 acctggccga cgtgtttgtc tgctcgatga gtctggctgg gcttcccgcg atgagcctgc
      481 cggtgggacg gagcgagggc ctgccgatcg gggcccaggt ggtggcgcca tatttcggcg
      541 aggaacggat gctggccgcg gcccaggtgc tcgagcggac gctggatccg ctggcggagg
      601 tgcgctgatg gcctgggaaa cagtcatcgg cctggaggtc cacgtccagc tgcgtacccg
      661 gaccaagatg ttctgcggca accgcactac gttcggcgat ccgcccaata ccaacgtctg
      721 ccccgtatgc ctgggtctcc cgggagcgct acccgtcccc aatgccgagg ccatccgtct
      781 ggcggtccgc ggcgccctcg cgctgggctg caccgtgcat gagaccagcg tcttcgcccg
      841 caagaactat ttctatcctg atctgcccaa gggttaccag atctcgcagt tcgaccggcc
      901 gctcgcgagc gggggcagtg tcagcttcga ctcgcccgat cgcggcagaa tacaggtggg
      961 catcactcgg ctccacgtcg aggaggacgc gggcaaactg ctgcacgatc ggttccccgg
     1021 aaggaccgcg gtcgatctca accgtgccgg cactcccctc gcagagatcg tgagcgagcc
     1081 ggacctgcgc tcgcccgcgg aggcccgggc gtacctcacc accctccggc agatcctggt
     1141 ctatgccggc gtgagcgagt gcagcatgga gcagggaagc ctgcgggtgg atgcgaatct
     1201 ctcaattcgg cccgccggca catccaagct cggcaccaag accgaagtga agaacatgaa
     1261 ctcgttcgcc aacgtcgagc gggcactcga ggccgagcgc gctcgccaga tcgcgctggc
     1321 ggaatcgggg cggcgggtag agcaggtgac tctgctcttc aatgcaggaa cgggtcaggt
     1381 caaaccgacc cgatcgaagg aggagagtca cgactaccgc tatttccctg atccggatct
     1441 gccgccgctg gtgctggcgc gggcctggat cgcggaacag caggctgccc tacctgagct
     1501 gcctgacgcg aagcgcgccc ggctggagtc ggcgtacgcc ttgcccgcgt atgacgccaa
     1561 ggtgatcgcc agcgaagcgg cactggcgca ctacttcgag gcggtggttc gtgcaggctc
     1621 cgatccgaag gccgccgcca actgggtcat gggcgacgtc atgaccacct ataatgaaag
     1681 cggcgcattc gccgtgactg ccgagcgcct ggcgcagctg atcggcctgg tccgagacgg
     1741 caccgtgagc catcaggcag ccaagcgggt ctacaccgag ctgactcgtt cacccgggga
     1801 ggatgccaga gtagcagcgg agcggcttgg cctggtgcag gtgagcgatc aagggtctct
     1861 atcaggatgg gtcgatgagg tcattgctgc tcatcccggc gaggtcgccc gctttcgcgg
     1921 cggcgaggcc aagctgatgg ggttcttcgt aggtcaggtg atgaaactga gcaaaggcaa
     1981 ggcggatccg aaaggcgtcc agccggtact gcaagagcga ttgcagcaaa cagcagggac
     2041 gaagccgtag cagagtgggt gccggcgcag ctgggctgag tcccgaaggc tgagcgcaag
     2101 gggtctggcg gggggaagtc ggcgcttgaa gccggaggga ctcggtccag ctgcgctcgc
     2161 cgatctacct accgtcagct cgtttgctct cccccgaagt gccatgccca ggagacgttc
     2221 tcccgagctc caacaaactc atcggatcca ccgagatcgc cccgtaccgc gccacccagt
     2281 gtagatgcgg ccctgtaacc cggccgctcc gacccaccgc tccgatacgt tgtcccgcta
     2341 ggacggtatc tccctgccgt acgtcgactc tactcaggtg gaaatagccg gtcaccaatc
     2401 ctgccccgtg gtcgatgtag accgcatggc ccgcgagata gaagtcggcc accaatgcca
     2461 ccacaccccg tccagcggcg cgcaccggcg caccggtcac gccggcgaaa tcggtcccga
     2521 gatggcgact ctgcacctcg ccgttgtaga cccgtgccgt accgaatcgg ctggtgatgc
     2581 gcgacgggcg gggaagccgg aacgcccccc gccagatccg tggcttgcct tgcgagctgc
     2641 gcgagacctg tctgctcctc tcgatctccg actggatccg gaccgttgcg gcgctatccg
     2701 gccgggcgta ggccggcggg accgacaaca tctcgctgga gtagcccgcc cggcgcaccg
     2761 gcacgaatat cgggagcgtg tcgcttcgtc cgggccgttc caggaagagc gacaccacaa
     2821 gagagtcagg ggcctcgacc gggacggcga ccaatccccg gaaggtgctg tcccggaaag
     2881 gctcgaagtg gagcggctca ccggcgactt caccgccgct caccacgacg ccctcgcgtg
     2941 tccccacccg aagccatccg acggtccctt cctggagcat ggccggttcg gtggtgaggg
     3001 tgacctgcgg caacgagtcc tgcccctgga ccggtgtgac ggccagcgaa gcgagaacga
     3061 caacggtggc gacgaacgct tgggcgtgac gagcggaccg ccctgccggc gggatgtggc
     3121 ggatcagcgg tcgccgctca cgagcaggtt gggagagggg gccgacccct caggagcccg
     3181 ccagggcagc ttgcgctgaa gcttgctcca gaacacgaag gcgcgttccg gcaagccgaa
     3241 ctgctcgttg gcggcgctct gcaggctcgc ggtatcgcgc cggcccgctt cccgcatgac
     3301 ccggcgccgc atctccttgg cagtcttgag cggacgctcg cccgaaggat ccaggtgtcg
     3361 tgccgacacc gccgactcgc ccagcagctc catcatgaag tcgaatgaga ggccaagatg
     3421 gcgctcgaca tcgtcgtcgc tcagttgcca gcggctatac tcgcgggcca cctggctggc
     3481 acgctgccag ctcgtggtct cggtcaggtg taccatgccg cgaaagaggc gccggttggt
     3541 gcggacgctg aagatcgtcg gagcgatgat gcgatcaaga tgggcatcgg cgccggcatg
     3601 gtcgagccgg atcacgtcct tggccacctt ggcgtaggca tcccccagat gggcctcgac
     3661 ccgggtctcc cagtacgagt gccctacggc ggcggtactg ctggtgagca tcagctggcg
     3721 gggcacgaag tagttgtggg cgatggtgtc ggcggcaagg tgactcagat atcccagccc
     3781 gaaggcgcgc agggcgtcgg tggccgcaag atcgtggatc tcctgcccga cgtgccagta
     3841 gtgacaatgg cggcccagcg gcgcgtaatg cttggcgata gacgagtcgg ccgcgatgtt
     3901 cccatagaga aagtcaaacg gaaaggcacg cagcaggtgg gcaactcctg cgggcagaaa
     3961 tgacaggttg gcgaggaccg actcgcccag gtagatgtgg gtgccgggcg tccaggcatg
     4021 tgcctgatgg gggacgagca ggagaatcaa ccccacgccc acgactgcga gcgtaaggcg
     4081 gcgaaaggtc atcagcggct cggcaccagc aatcggcgga cgcggcccag catgccgttg
     4141 ccgcggcgga cggaacggag cgcggcggcg acgtccagcg ccgtgccttc cacctcgtcg
     4201 tgcaccacgt cgtagagcgt ctcgagctcc tcgagtttca cctcgacccg gtccgccgcg
     4261 cgcaccagct tcctccggag ccgccgggca gtctgggcga aggcgccggt ctcctggcgg
     4321 accaccacca tcacatcctg cccctgttcg gtcaggcgac ggaccgcctt cagggtgcgg
     4381 gcaacatcat cctggaggcc agcgacgagc gtgccgacct tcttcacctg gccggcgagc
     4441 ttgagggcgg cgatcgccat ggccagcgcg atgccgagga acgacagcgc aatgaccgcc
     4501 agggatatcg ccatggtcgg tcccacccat tccggggatg cgctgacctg cacgagtgcc
     4561 atcatacggt gacctccttc gcgcctgctc gaacgccagg gaccgggtgc gctgactgcc
     4621 caccctggct aatacaaagc ggtcgcggca gcaccgcaac cccctcggtt ccgcttgacg
     4681 cgattcattg tcggagtcag ctttggccat gcctcctcgt tttctcgtgc agggcggccg
     4741 tccactgcgt ggaaccgtgc ggcccgccgg caacaaaaac gccgcattgc cgatcctcgc
     4801 cgccacgctg ctggcggacg gccctgtcga gctcgataac attccgcgca ttcgcgacgt
     4861 cgaaaccatg ctggcgctgc tggtcgacct gggcgcggcg gcggaatgga ccggcgccca
     4921 cagccttcgc gtcgatactc gaagcgtaaa gcccaagccg ttggacccgg cactctgcgc
     4981 caagattcgg gcgtcgatcc tgctggccgg tccgctgctg gcccggttcg gcagcgtgac
     5041 gctgccgcct cccggtggcg acgtgatcgg acgccggcgg gtggacaccc atttcctggc
     5101 gctcgagcat ctcggtgcct cggtgatggt gggtgatcgc tacgagctcg aggccaagga
     5161 gctcaaggga gatgacatct tcctcgacga gcccagcgtc accggaaccg agaacgcgct
     5221 gatggcggcg gtcatggcca agggccggac ggtgctccgc aatgccgcat gcgagcccca
     5281 cgtgcaggac ctcgctcggg tgctggtagc catgggtgcg gagatcgccg ggatcgggtc
     5341 gaacatctac accatcgagg gcggacgccc cctgatgggc acctcctaca ccataggacc
     5401 ggaccacatc gagatcggga gcttcatcgg cctggccgcg gtcaccaatg gcgacgtcac
     5461 catcgagccg gtgcgtagcg aagacctccg cagcatcctc ctcggcttcg agcggctcgg
     5521 cattcgtccc cgcgtcgagg gcacgcggct tagcgtcagt ccgggccagg aacggcggat
     5581 ccgcccggac ctcggcggac atgttcccaa gctggaggac ggaccctggc ccgcgttccc
     5641 cgcagacgtc atgtctacca cgatcgtgac cgcgacgcag tgctccggca tgcttctcgt
     5701 gtttgagaag atgttcgagt ccc
//
LOCUS       DASYRV010000118         3200 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_877732, whole genome shotgun sequence.
ACCESSION   DASYRV010000118 DASYRV010000000
VERSION     DASYRV010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3200
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_877732"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..430)
                     /locus_tag="VGQ24_02930"
     CDS             complement(<1..430)
                     /locus_tag="VGQ24_02930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453818.1"
                     /translation="MSLSRLVVIAWCAGSAAAPLAAQGIPRGARTTQTVANAPRFMVA
                     NPFTFASADSASAVKIGTAAREEMKAIVGRNFTVVEQVQMNDALKQYGYPVDAILSPP
                     LATTLAKNIQARVLMSGTMARGAGERTAVTARLIGVNDDAG"
     gene            complement(501..575)
                     /locus_tag="VGQ24_02935"
     tRNA            complement(501..575)
                     /locus_tag="VGQ24_02935"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(538..540),aa:Val,seq:tac)
     gene            complement(642..794)
                     /locus_tag="VGQ24_02940"
     CDS             complement(642..794)
                     /locus_tag="VGQ24_02940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453819.1"
                     /translation="MLAPRNLIILAAAVLVLVAGYLMLQAGHASAAAVILVFGYCVLF
                     PIGIAL"
     gene            complement(863..1684)
                     /locus_tag="VGQ24_02945"
     CDS             complement(863..1684)
                     /locus_tag="VGQ24_02945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453820.1"
                     /translation="MTAVAWPQQLQLAANLARRANETADWPGLGRRAPGPLRLIVVPD
                     GRRLDSLSQGRAPSWGAAVALPGARVILLRADADDIYATLRHELAHLALHQAVPVRVP
                     LWFDEGYAAWAAGEWERLGTLELNLAVVRGAVPDLRGLDGALRGSATSADAAYALAVS
                     AVTELARRNPSGSIAPLLQRLTAGHDFEASVLETTGLTLSQFERGWQRRVRQRYSLAT
                     WLLAGGGWGLVALSAWVLVRLRRRADRARRAALDEGWELPPESTAASELDQAPER"
     gene            complement(1792..2655)
                     /locus_tag="VGQ24_02950"
     CDS             complement(1792..2655)
                     /locus_tag="VGQ24_02950"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEV8453821.1"
                     /translation="MTDPWLNSLRTQLEELAGRVDAPGTDRDGVKRDIIALFKRVDGA
                     LTDLGQIKDEIRGLVERYKQGNSVAPTPAPQFTGARPAVHADHLGASTYIEKGWSLIS
                     LGDYSAAIQALDKALSLSPGAVEAQSLLGWAQMLHEDYDDALGNFSKVLMKEPANALA
                     RINVGYICLKKRIFGEAIEHLSKAIRLDNDRKATLYAHYYLGLVYLEREMYEDAQSFL
                     RKTLKLGPNLIEAYFELGRALWLGGNREEAVRAWTDGYKANKFNPWAKRCQEMLDVAA
                     AGGEVPRSPVA"
     gene            complement(2656..>3200)
                     /locus_tag="VGQ24_02955"
     CDS             complement(2656..>3200)
                     /locus_tag="VGQ24_02955"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HEV8453822.1"
                     /translation="GETCRWAGAPVGSAGAQLTHHGDRIDMNTGDDVQVVTFKVGRQE
                     FAFDILQVERILRYTAPSPLPKAPEFLEGVLSYGGSAIPVIDLRKRFELAAPIREETR
                     MMVLELETQRVAVLVDAVCEVVRVDSTAITAPGPVVSGLAAVYIAGIISRPERTIIIL
                     NARKLLSATERLALETLGAA"
BASE COUNT          578 a         1048 c         1038 g          536 t
ORIGIN      
        1 agccagcgtc gtcgttgacc ccgataagcc gggccgtaac ggctgtgcgc tcacctgcgc
       61 cacgagccat cgtgccggac atgagcacgc gagcctggat gttcttggct agagtcgtgg
      121 ccagcggcgg actcaggatg gcgtccaccg gatagccgta ctgcttcagc gcgtcgttca
      181 tctgcacctg ctcgacgacg gtgaagtttc ggccgacaat agccttcatc tcctcgcgcg
      241 cggcggtgcc gattttgacc gcgctggccg aatcggccga ggcaaaggtg aatggattgg
      301 caaccatgaa gcgtggagcg ttcgcgaccg tctgggtcgt gcgagctccg cgggggatgc
      361 cctgcgcagc caggggggcc gcggcagatc cagcgcacca ggcgatgacg acaagacggg
      421 acaggctcat tccttaagtc tccccaacag gacagccctt ttgggcctac gacagcccgc
      481 tcttcccgcg ggcgcttgag tgggcgaaga gggattcgaa cccccgacat cctgcgtgta
      541 aggcaggcgc tctgaaccag ctgagctatt cgccctgacg cgacgcatcc cccaagcttt
      601 tagcggtatt gcagggaccg tgccgtgatg agcgacactc tctatagcgc aatgccgatt
      661 ggaaacaaca cgcaatagcc gaagaccagg atcaccgccg ccgcactggc atggcccgct
      721 tggagcatca gatacccagc caccagcacg agcaccgccg ccgcgagaat gatgaggttc
      781 cgcggcgcga gcacgaaatg tcgtggcgct gagttgcgcg atggagtgga tgggcgagga
      841 ttcgacatag gggttgaggc tactaccgtt cgggagcctg gtcaagttca gacgccgctg
      901 tgctttccgg gggaagctcc cacccttcgt ccagggcggc ccgacgggcc cggtccgctc
      961 ggcggcggag tctgaccaat acccatgcag agagcgcgac caggccccag ccgcccccgg
     1021 ccaggagcca ggtggcgaga ctatatcgct ggcgaacgcg ccgctgccac ccacgctcga
     1081 actgcgaaag ggtcagcccg gttgtctcca gcacgctggc ctcgaagtcg tgccccgccg
     1141 tcagccgctg gaggaggggt gcgatcgagc cggaggggtt ccgtcgggcg agctcggtca
     1201 cggcggagac ggcgagggca tatgcagcat cggcactggt agccgagccg cgcagcgcgc
     1261 cgtccagacc acgaaggtcc ggcactgccc cgcgcacgac cgcaaggttg agctcgagcg
     1321 tcccgaggcg ttcccactca cccgcggccc acgcggcgta accctcgtca aaccagagcg
     1381 gcacccgcac gggcaccgcc tgatggagcg cgagatgggc gagttcgtgc cgaagggttg
     1441 cgtagatgtc gtcggcgtcc gcccggagca ggatcactcg cgcgcccggc aaggccacgg
     1501 ccgcgcccca ggacggcgcc ctgccctggc tgagtgagtc cagacggcgc ccatcaggga
     1561 ccacgatgag gcgcagggga ccgggcgctc ggcgccccag cccgggccag tcggcggtct
     1621 cgttcgccct ccgggcgaga ttggccgcaa gctggagctg ctggggccat gcgaccgccg
     1681 tcacctgccc tacccggacg gcggcaggct ggttttgtac tgcgggagcc gagaccgtga
     1741 aaccggcccc gtatgtccag ccgagcagcg agatgaggag cgagagcttc gctaggcgac
     1801 gggactgcgc gggacttcgc ctcctgctgc cgctacatcc agcatttcct ggcaccgctt
     1861 ggcccatggg ttgaacttgt tggccttata gccgtcggtc caggcgcgaa ccgcctcttc
     1921 ccggttgccc cccagccaca gagcccgccc gagctcgaag tacgcctcga tgagattcgg
     1981 ccccagtttg agcgtcttgc gcaaaaaact ctgggcgtcc tcgtacattt cgcgctcgag
     2041 atacaccaga ccgagataat agtgggcgta gagcgtcgcc ttccgatcat tgtcgagccg
     2101 gatagccttg gagaggtgct cgatggcctc gccgaagatc cgcttcttca ggcatatgta
     2161 accgacattg atccgggcca gcgcattggc cggctccttc atgaggacct tggagaaatt
     2221 accgagcgcg tcgtcgtagt cctcgtgcag catctgggcc caccccagca gggattgcgc
     2281 ctcgactgcg ccgggcgaga gactcagcgc cttgtccaat gcctgaatcg ctgcactgta
     2341 gtccccgagc gagatgagac tccaaccctt ctcgatgtag gtcgaagcac cgaggtggtc
     2401 ggcgtgaacg gcgggcctgg caccggtgaa ctgcggggcc ggagtgggtg ccacgctgtt
     2461 tccctgtttg tagcgctcca ccaacccacg aatttcgtct ttgatctggc cgagatcggt
     2521 caaggcccca tccacccgct tgaacagggc gatgatatcg cgtttgacgc cgtcgcggtc
     2581 ggtgccgggg gcgtcgaccc tgccggcgag ctcctccagc tgtgtacgta gagaattgag
     2641 ccacggatcg gtcatctagg cggccccgag agtctctagc gccagccgct cggtcgcgga
     2701 aagcagcttg cgagcattga ggatgatgat cgtccgctcc ggacgggaaa tgatccccgc
     2761 gatgtacacg gccgccaggc cgctcaccac cggccccggc gcagtgatgg cggtactgtc
     2821 aaccctcacc acttcacaca ctgcatccac caggacggcc acccgctgag tctcgagctc
     2881 gagcaccatc atgcgggttt cctcccggat gggtgccgcg agctcaaagc gcttgcggag
     2941 atcgataacg ggtatcgcgc tgccaccgta cgacaggacg ccctccagga actcgggggc
     3001 tttcggcaga ggcgagggtg cggtgtatcg gagaatccgc tcgacctgaa ggatgtcgaa
     3061 tgcgaattcc tgacgaccga ccttgaaggt cactacctgg acgtcgtcgc cggtgttcat
     3121 atcgatccga tctccatgat gcgtgagctg agcgccggca gatccaacag gggcaccagc
     3181 ccaccggcat gtttcgccac
//
LOCUS       DASYRV010000119         3215 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_253291, whole genome shotgun sequence.
ACCESSION   DASYRV010000119 DASYRV010000000
VERSION     DASYRV010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3215
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253291"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..401
                     /locus_tag="VGQ24_02960"
     CDS             <1..401
                     /locus_tag="VGQ24_02960"
                     /inference="COORDINATES: protein motif:HMM:NF025888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453823.1"
                     /translation="WRSEDVGYVTAEPCVCGRTSTRMHFLGRVGYRVTVRGKMIFPVE
                     IQQVMETYPEVEHGLFQIVRYASEMDRLRLRVGYRLHEVTDTELLRKRLVERLESALA
                     LPIDLEFVKAEELLALGPPHKIPRIHEVTP"
     gene            446..2116
                     /locus_tag="VGQ24_02965"
     CDS             446..2116
                     /locus_tag="VGQ24_02965"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEV8453824.1"
                     /translation="MAPIFLLLFFFIPYPIGVLLLGSLSKVEPTRLEHVFSNLTLVNY
                     LEVYGTASLYKATYNSLVGCAGGAVLAMLIGLFFAWVVARTDIKGKGLIEIIAIMPLF
                     ISPLVASMAWAILASDRAGILNLVLKDLGAHFRLNIYSFGGIWFVLGVYYAPYTYMFL
                     TPALQRMDPVLEEASAISGANAWQTVRRVTFPLIIQPILSAALLVFVITLGLFAVPAM
                     IAVPANIHFLTTYLFNLVTGNPPAYEKAASVSVLLIALTLIGVFLQGWLIGRRSFVTV
                     TGKASRPRLFKLRKWKPVVVALVGFYLVITVVLPYLALLLQGIRSFMFFPDVRSIFDP
                     SMLTLEHFRFLWTHEQAFTAIRNSLYMGALAAVVGSTLCFLTAYCIHRTDLPGRKSLD
                     YLSMIPVAVPGLVIGVAYLWAWISFPVPIYGTIWILALAYVARFIPDGVRAAGVNLVQ
                     IHKELEESSRIHGGSFWQTLRRVMIPLARPSILSSMILLFILAVRELGSSIFLYTTDS
                     IVLSVQIYNQWESAEYGATAVLSLVQTAILVVVVIAARRYVMRSEATV"
     gene            2177..>3215
                     /locus_tag="VGQ24_02970"
     CDS             2177..>3215
                     /locus_tag="VGQ24_02970"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEV8453825.1"
                     /translation="MVQKGTWLAVIAVVLGFAVGPALAASLTEELGGEELIRAAKQEG
                     KVVVYTANILALAKTMETNFSKRFPEVKVELVRLGGGALHRKILTEHSAGKLVADVIE
                     MSDRGLIRQEIEAGVIGKHAIPTDDRYPADTKIPGMVYPGCEYIYLVAYNPMIVKDPP
                     KSWMDLVDPRFKGQLGLVPAELGGTPWMTALFQYQVLGNNSDSYWQKLAAQKPRFFTS
                     AAGIGKTLISGETPVAVALDVVSAADIKRGAPVRYVYPPEGVVMIIFNNAITTVAKNP
                     NAAKLWMNWTHSREGQEVWTKQIGGLSPRSDIDPPPTAPRNVKVWQATEDDFVKLRSA
                     YTKRWNEIFDYK"
BASE COUNT          535 a         1075 c          990 g          615 t
ORIGIN      
        1 ggtggcgcag cgaggacgtc ggctacgtga cggccgagcc ctgcgtgtgc gggcgcacgt
       61 cgacgcgcat gcacttcctc ggccgcgtcg gctatcgcgt caccgtgcga ggcaagatga
      121 tcttccccgt ggagatccag caggtgatgg agacctaccc ggaggtcgag cacggcctct
      181 tccagatcgt ccgctacgcg agcgagatgg accggctacg gctgcgggtc ggctaccgtc
      241 tccacgaggt gacggacacg gaactcctgc ggaagcgcct ggtcgagcgt ctcgagagcg
      301 ccttggcgct gccgatcgat ctggagttcg tcaaggccga ggagttgctc gcgctcggtc
      361 ccccgcacaa gatcccgcgc atccacgagg tcacgccgta atcacctctc cccgggcgcg
      421 gcggcgcgcg tgggctctcc tggccgtggc gccgatattc ctcctcctct tcttcttcat
      481 cccctacccc atcggcgtcc tgctgctggg gtccctctcg aaagtcgagc ccacccggct
      541 ggagcacgtg ttcagcaacc tgaccctcgt caactacctc gaggtgtacg gaacggcatc
      601 cctctacaag gcgacctaca acagcctcgt cggctgcgcc ggaggggcgg tcctggcgat
      661 gctgatcggg ctcttcttcg cctgggtggt cgcccgcacc gacatcaagg ggaaagggct
      721 catcgagatc atcgccatca tgccgctttt catctcgccc ctcgtcgcct ccatggcctg
      781 ggccatcctg gccagcgacc gggcgggcat cctgaacctc gttctcaaag acctgggggc
      841 gcactttcgc ctcaacattt actcgttcgg gggcatctgg ttcgtcctcg gggtctatta
      901 cgctccctac acctacatgt ttctcacccc cgccctccag cggatggacc ccgttctgga
      961 ggaggcttcc gcgatcagcg gggcaaacgc ctggcagacg gtgcggcggg tcaccttccc
     1021 gctcatcatc cagcccatcc tctcggcggc gctcctggtc ttcgtgatca cgctgggcct
     1081 cttcgccgtg ccggcgatga tcgcggttcc tgccaacatc cactttttga ccacgtatct
     1141 cttcaacttg gtcacgggga atcccccggc ctacgagaag gctgcctcag tgagcgtcct
     1201 tctgatcgcg ctcacgctga tcggcgtttt tctccaggga tggctcatcg gccggaggag
     1261 cttcgtgacc gtcacgggca aggcgagccg gccacggtta ttcaagctac gcaagtggaa
     1321 gcctgtcgtg gtcgccttgg tcgggttcta cctcgttatc acggtggtgc tgccctacct
     1381 tgcgcttctc cttcagggca tcaggagctt catgttcttt cccgacgtcc ggtccatctt
     1441 cgatcccagc atgctcaccc tggagcactt ccgattcctc tggacccacg agcaggcctt
     1501 cacggccatc cggaacagcc tctacatggg cgccttggcg gccgtcgtgg gctccaccct
     1561 atgtttcctc acggcctatt gcatccaccg gacggacttg ccggggcgga agagcctgga
     1621 ctacttgagc atgatcccgg tggcggtccc gggtctggtg atcggcgttg cgtatctctg
     1681 ggcgtggatc tcctttccgg tgcccatcta cggaacgata tggatcctcg ccctggccta
     1741 cgttgcccgc ttcatccccg acggggtgcg cgcggcgggg gtgaacctgg ttcagatcca
     1801 caaagagctc gaggagtcca gccgcatcca cgggggcagt ttctggcaga cgctccggcg
     1861 ggtgatgatc ccgctcgccc ggccgagcat tctctccagt atgatcttgc tcttcatcct
     1921 ggccgtgcgg gagctgggtt cctcaatttt cctgtacacg accgacagca tcgtgctgtc
     1981 agtacagatc tacaaccaat gggagtcggc ggaatacgga gcgacggcgg tcttgagcct
     2041 ggtccagacg gctatcctcg tcgtggtggt gatcgccgcg cgccggtacg tgatgcgttc
     2101 cgaagcaacg gtgtaatcgg cgcgggatgt atgcccttcg gccgggccgc ccgtccaact
     2161 gtggggaggt gtcgagatgg tccagaaggg cacatggctc gccgtcatcg cggttgtcct
     2221 cgggtttgcg gtggggccgg cgctcgccgc ctcgctgacc gaggagctcg ggggcgagga
     2281 gctcatccgc gccgccaagc aggagggcaa ggtcgtggtt tacaccgcga acatcctcgc
     2341 cctcgccaag accatggaga cgaacttcag caagcgcttc ccggaagtca aggtcgagct
     2401 cgtccgcctg gggggaggcg cgctccaccg gaagatcttg accgagcact cggcgggaaa
     2461 gctcgtggcc gacgtgatcg agatgtccga ccgcgggctc atacgccagg agatcgaggc
     2521 cggcgtcatc ggcaagcacg ctatccccac cgacgacagg tatccggcgg acaccaagat
     2581 ccccggcatg gtgtatcccg gctgcgagta catctacctc gtcgcctaca accccatgat
     2641 cgtcaaggac ccgcccaaga gctggatgga cctggtcgat ccgcgcttca aggggcagct
     2701 gggtctcgtc cccgccgagc tcggcggcac cccctggatg accgccctgt tccagtacca
     2761 ggtgctcggc aacaacagcg acagctactg gcagaagctc gccgcccaga agccgcgctt
     2821 cttcacgagc gcagcaggga tcggcaagac cctgatcagc ggcgagaccc cggtcgcggt
     2881 ggccctggat gtggtctccg cagccgacat caagaggggc gcgccggtca ggtacgtgta
     2941 ccccccggaa ggggtggtca tgatcatctt caacaatgcg atcaccaccg tggccaagaa
     3001 cccgaacgcc gccaagctct ggatgaactg gacccattcg cgcgaggggc aggaggtgtg
     3061 gacgaagcag atcggcggcc tttccccgcg cagcgacatc gatcctccgc ccaccgctcc
     3121 cagaaacgtg aaggtgtggc aggccaccga ggatgatttc gtgaagctgc gcagcgccta
     3181 taccaagcgc tggaacgaga tcttcgacta caagc
//
LOCUS       DASYRV010000120         5383 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_647908, whole genome shotgun sequence.
ACCESSION   DASYRV010000120 DASYRV010000000
VERSION     DASYRV010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5383
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_647908"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..999
                     /locus_tag="VGQ24_02975"
     CDS             <1..999
                     /locus_tag="VGQ24_02975"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEV8453826.1"
                     /translation="QTGSNQLRRLVTRTLVLCSALSALSAFSVLSAQTDPRLVDIIRQ
                     AQQGQGDSARFKVQRLLATTSTADTLYPQILYTQAMVATDAADMRRQLQRVAVEHSSS
                     SWADDALLRLVQLDYASGNLDGAARNLERLRRDYPGSTLLPQTSYWAARTYFDQKNPA
                     AACRWLADGLAASRGNVELQNQLGYLNQRCPQVPQVAMDSAPQAPPDSPATVASASPD
                     TASARRADSTPPPGGPPPQPTRADTTIRTPAAQPVPTRTPGGRFRVQVTAVRTAAAAD
                     AIARKLSARGLAAVTFEEGGLYKVRVGDYASRADAMAAIPKIKAKLGGSPFVVAEP"
     gene            1338..2183
                     /locus_tag="VGQ24_02980"
     CDS             1338..2183
                     /locus_tag="VGQ24_02980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453827.1"
                     /translation="MTAHDVVAAWSERKAVEGSLALQSAVALDDRRIAVTLSRPEDSV
                     PKILADPAFAMAIDPAQRPPGVKFEIQTGMDPRDALDRGGDLVVTRDPALVEYVAARP
                     EFTAFALPWSRTYVLLQPASAKPLDIVWGDADRRSLARDAVSADARAAEPPFWWNEVT
                     ACPTGMASGPTSASSRIAYIRGDEVARGLAERIVALAGSGAGLRAAALEPADFATMLR
                     TGSDRAYVIALPRHTLAPCRESAAWPGGARIQPLIDARAYAIVRRGAPPLAVEWDGTV
                     RVAPR"
     gene            2180..3874
                     /locus_tag="VGQ24_02985"
     CDS             2180..3874
                     /locus_tag="VGQ24_02985"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEV8453828.1"
                     /translation="MSFRTRLFFGILVAVLLPLGALAYGVRREMERRLTAEYEGRVGS
                     MVSVIEADLNRESRTLASRLAALGSELARNDRFRLAALRGDPASRPYLLDYAGQAMRL
                     SGLSLLQVQDSGGRILSSGHFRNEFDQLQPELPRLLAVADTMALVRTRTPEAALLALA
                     RVDSFRVGGKRFTLVGGIEAEGRLLDRLTRNSELSIALLYPGKEQSPSAGARVLRELR
                     LPYLDLLNSGGATIDTARFTVTQSLGTLEALRRSVDRWFLAAIGITVGVALIVAAWLS
                     SMISRPLRELAQKTSKIDLDRLDQSFESDRPDEIGALSRLLGAVMERLRVGSARLREV
                     ERRAAVGDLARQVNHDIKNGLAPIRNVLRHLSQVGRQDPQLLPSVFEDRRSTLESSVE
                     YLETLAQNYARLSPGLERRPCDVNAVVDQILRNTTSDGAELRARLSEQLPPVLGDSLM
                     LRRILENLIGNAVDSLAGRKDGMVTVSTEGTAGNPNRVRITVTDTGPGMTREQLERAF
                     DDFYTTKAGGTGLGLSIVRRLVMDLDGVLRIETEPGAGTRVVLEFPAASTPPAASA"
     gene            3874..5235
                     /locus_tag="VGQ24_02990"
     CDS             3874..5235
                     /locus_tag="VGQ24_02990"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEV8453829.1"
                     /translation="MTVVLVVDDVPTMAGQYAYDLERLAGYQVLTAGDGKRALDLLAG
                     SAVDCMILDLEMPGMDGFEVLRALERLGSEVPVIVYTGTGNYERCIQAVRLGAYGFID
                     KAEPMERVVQEVEAAIERKRLRAEVAALQRKLGVETSLVGSSPAIVRLREAIARVAPI
                     PSPVLIIGESGSGKELVARDLHRLGPFPGGPFVAINSAALPEHLVESELFGHERGAFT
                     GASSTRKGAFESADRGTLFLDEIGELPLPAQAKLLRVLEDRRVTRLGGSRPIPVEARV
                     VAATNRDLEAEVAAGRFRQDLYYRINVHLVRVPPLRDRISDIPEIAAGFIAATCERFG
                     MRARKLSGDALDVLMGYDWSQNNVRELGNVIERMIIAADGDVLRPEHVPPDITERSRV
                     PSRAADGERSFQSLRLEAERQIVIAALERNEWHITRTAEALGLADHASLLKIMRRLEV
                     RRE"
BASE COUNT          878 a         1842 c         1746 g          917 t
ORIGIN      
        1 cagacaggat ccaaccagct gcgtcgtctt gtgacgagga cgttggtgct ttgctccgcc
       61 ctctctgccc tctccgcctt ctccgtcctc tccgcccaga ccgacccgcg tctggtcgac
      121 atcatccgcc aggcccagca aggccagggc gactcggccc gcttcaaggt gcagcgactg
      181 ctggcgacca cttccacagc cgatacgctg tatccccaga tcctctacac ccaggccatg
      241 gtggcgaccg atgccgccga catgcgccgc cagcttcagc gcgtcgcggt agaacattcc
      301 tccagcagct gggccgacga tgcgctcctc cggctggtgc agctcgatta cgccagcggc
      361 aacctggatg gggcggcccg caacctggag cgactccggc gcgactaccc gggcagcacg
      421 ctcctgcccc agacgtccta ctgggctgcg cgcacttact tcgatcagaa gaacccggcg
      481 gccgcctgcc ggtggcttgc cgatggcctg gccgcctcgc gcggcaacgt cgagttgcag
      541 aatcagcttg gctacctgaa ccagcgctgc ccccaggtcc ctcaggtggc aatggattcg
      601 gccccccagg ccccaccgga ctcgcctgcg accgtggcga gcgccagtcc ggacactgcg
      661 tccgcgcgcc gcgccgacag cacgcctccg cccggaggtc ctccgccgca gccgacccgg
      721 gccgacacca caatccgaac acctgcggcg cagccagtcc cgacccgaac accgggcggt
      781 cgcttccggg ttcaggtcac agcggtgcgt actgcggcgg ctgcggacgc catcgccagg
      841 aaactgagcg cacgcgggct cgcggcggtg acgttcgagg aagggggact ctataaggtg
      901 cgggtgggtg actatgcgag ccgggccgac gctatggccg caataccgaa gatcaaggcc
      961 aagcttgggg gcagcccatt cgtggtcgcg gagccctagc ggcggccgcc tcgcgcggca
     1021 ctctcgcgat ttctctactg gtcgcaggct gcgccccaaa gcccacccag tctctcatcg
     1081 ctcccgaccg ccaggacccc tgtcgccttg tcgcgaactc agcgagcccg ctcgacacgc
     1141 tgacagtgcc gctgttggac cccgtggatc gggatcatgc cctggcgcct gccaacgaca
     1201 ccgagctgct tctctatcga atgaccctcg ataccccgct gcgactcgat tgccaaggcc
     1261 aagccctgcc cggcctcgcg agatcctggg agagggattc aactaggcgg gtgtggactc
     1321 taacgctgaa ctcgcccatg accgcgcacg atgtcgtggc ggcctggagc gagcgcaagg
     1381 cagttgaggg atcgctggct ctccaatccg ccgttgccct ggacgacagg cggatcgcag
     1441 tcacgctgag caggccagag gactcggtgc caaagatcct cgccgacccg gcgttcgcca
     1501 tggcgatcga tccggcccaa cgcccgcctg gggtgaaatt cgagatacag accggcatgg
     1561 atccgcgcga cgcgctcgac cgcgggggcg atctggtagt cacgcgcgat cccgcccttg
     1621 ttgagtatgt ggcggcacgg cccgagttca ccgctttcgc gcttccgtgg agccgcacct
     1681 acgtcctgct tcaacccgct tcggccaaac ctctcgacat cgtgtggggg gatgcagacc
     1741 gccgctcgct ggcgcgtgac gcggtcagcg ccgatgcgcg cgccgccgag ccgcctttct
     1801 ggtggaatga agtgacggcg tgccccaccg gcatggcctc ggggccaacc tccgcatcat
     1861 cacggatcgc gtacatccgt ggagatgagg tggctcgagg cttggccgag cgcatagtgg
     1921 cgcttgctgg gtcgggcgcc ggattgagag ctgctgccct ggagccggcg gactttgcga
     1981 cgatgctccg gaccggctcg gaccgggcgt atgtgatagc gcttccccgc catacgctcg
     2041 ccccctgccg cgagtccgcc gcctggcctg gcggagcgcg gatccagccg ctgatcgatg
     2101 ccagagccta cgccatcgtc cgtaggggag ctccgcccct cgcggtcgaa tgggacggca
     2161 ccgttcgagt ggctccgcga tgagcttccg cacccgcctc ttcttcggga ttcttgtcgc
     2221 tgtgctcctg ccgctcgggg cactcgccta cggcgtgcgc cgggagatgg agcgccgcct
     2281 tactgccgag tacgagggcc gggtaggctc gatggtctcg gtgattgagg ctgatctcaa
     2341 ccgggagagc cggaccttag cctcacggct tgcggcgctc ggctcggagc tcgcccgcaa
     2401 tgatcgcttc cgcctggcag ccctgcgggg tgatccggcg tccaggccgt atctgctgga
     2461 ctacgccggt caggcgatga ggctgtcggg cctttcactg ctccaagtcc aagatagcgg
     2521 cggcaggatt ctcagctcgg gacacttccg gaacgagttc gaccagttgc aaccggagct
     2581 ccctcgcctc ctggctgtcg ccgacaccat ggcccttgtc cgaaccagga ctccggaagc
     2641 ggctctgctg gcgctcgccc gggttgattc cttcagggtc ggtggaaaac ggttcacgct
     2701 ggtcggcggg atcgaagccg aaggccggtt gctcgaccgg ttgactcgga atagcgagct
     2761 ctccattgca ctcctgtacc cgggaaagga gcagtcgcca tcggccggag cccgggtgct
     2821 gcgcgagctt cgcctgccgt atctggatct cctgaattct ggcggggcca ccatcgacac
     2881 cgctcgtttt accgtcaccc agtcgctcgg cacactcgaa gcgttacgcc gaagcgtcga
     2941 ccggtggttt ctggcggcga tcgggatcac agtgggcgtg gccctcatcg tcgcggcctg
     3001 gctctcgtcc atgatcagcc gcccactgag ggagctggcg cagaagacct cgaagatcga
     3061 cctcgatcgg ctggaccaga gcttcgagag cgatcgtccc gacgagatcg gcgcgctgtc
     3121 tcgcctgctc ggcgcagtga tggagcgtct ccgggtcggc tccgccaggc tgcgagaggt
     3181 ggagcgtcgt gccgcggtag gcgacctggc ccggcaggtg aatcacgaca tcaagaacgg
     3241 cctcgcgccg atccggaacg tgctgcggca cctctcccag gtcggccgcc aggaccctca
     3301 gctcctcccc tcggtgttcg aggatcggcg cagcaccctg gaatcgagcg tcgagtacct
     3361 cgagaccctg gcgcagaact acgctcggct gtcacccgga ctggagcgcc ggccgtgcga
     3421 cgtgaacgcc gtcgtggatc agattctgcg gaataccacg agcgatgggg cggagctccg
     3481 ggcccggctg agcgaacaac tccctcccgt cctgggcgat agcctcatgt tgcggcgcat
     3541 cctggagaac cttatcggaa acgcggtcga tagcctggcg ggccggaaag atgggatggt
     3601 gacggtctcg actgaaggga ccgccggcaa cccgaatcgg gtccggataa cggtgacaga
     3661 caccgggccc gggatgaccc gtgagcagct ggagcgagcg ttcgacgact tctacacgac
     3721 caaggccggc gggaccggtc ttggtctctc gattgtccgg cggctggtca tggatctgga
     3781 tggagtgctt cggatcgaga ccgagcccgg agccggcacg cgcgtggtcc tcgaattccc
     3841 cgctgcttcc acccctccag cggcatcggc ataatgacgg tcgtactcgt cgtggatgat
     3901 gtccccacca tggccggcca gtatgcctac gacctcgagc gcctcgccgg ctaccaggtg
     3961 ctcacagccg gcgatggcaa gcgagcgctg gatcttctgg ccggctccgc cgtcgactgc
     4021 atgatcctcg atctcgagat gcccggtatg gatggctttg aggtcttgcg agccctggaa
     4081 cgtctcggaa gcgaggtacc ggtgatcgtc tataccggca cggggaatta cgagcgttgc
     4141 atccaggctg tccgcctcgg agcatacggg ttcatcgata aggccgagcc gatggagcgc
     4201 gtcgttcagg aggtagaggc ggcgatagag cgaaagcggc tccgcgccga agtggctgcc
     4261 cttcaacgga agctcggcgt cgagacctcc ctggttggct cgagtcccgc catagtgcga
     4321 ctccgcgagg cgatcgcccg ggtagcaccg atcccgagtc ccgttctcat catcggcgag
     4381 agcgggtccg gcaaggagct cgtcgcccgc gatctccacc gcctggggcc gtttcccggc
     4441 ggtccgttcg tggcgatcaa cagcgcggcg ctcccggagc atctggtcga gagcgagctc
     4501 ttcggccatg agcgaggtgc tttcaccggg gcctcaagca ccaggaaggg ggcgttcgag
     4561 tcggccgatc gtggcaccct ctttctggat gagatcggtg agctgccgct tcccgcgcaa
     4621 gccaagctgc tccgcgtgct ggaggaccgc cgggtcaccc ggctcggcgg cagccgtccg
     4681 attcccgtcg aagccagagt cgtggcggcc accaatcgag atctcgaggc ggaggtcgcg
     4741 gccggccggt tccgccagga cctgtactat cggatcaacg tgcacctcgt gcgcgtgcca
     4801 cccttacgcg accggatctc cgatatcccg gagatcgcgg ccgggttcat cgccgccacg
     4861 tgcgagcgct ttgggatgcg ggccagaaag ctttccggcg atgccctgga cgtcctgatg
     4921 ggttacgact ggtcccagaa caacgtgcgg gagctgggga acgtgatcga gcgaatgatc
     4981 atcgctgccg acggcgacgt cctccgtccc gagcatgtcc cgcccgatat cacggaaaga
     5041 agccgggtac cgtcccgtgc ggctgacggg gaacggagct tccagagtct ccggctagag
     5101 gccgagcggc agatcgtcat cgccgctctc gagcggaacg agtggcacat cacccgaacc
     5161 gcagaagcgc tcggcctcgc cgatcacgca agcctgctca agatcatgcg ccgcctggag
     5221 gtgagaaggg aatgaaatgt ttcgtgtccc gcgggacacg agcaccccac cacatccgtg
     5281 tccagcggaa caccatctcc tccgtaccgg tccaactcac ttcacgtaac tcgttctctc
     5341 ccaaatggct cgcgcgatct cccgacgctc tggccccatg gcc
//
LOCUS       DASYRV010000121        10131 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3990468, whole genome shotgun sequence.
ACCESSION   DASYRV010000121 DASYRV010000000
VERSION     DASYRV010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10131
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3990468"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(120..1034)
                     /locus_tag="VGQ24_02995"
     CDS             complement(120..1034)
                     /locus_tag="VGQ24_02995"
                     /inference="COORDINATES: protein motif:HMM:NF013226.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HEV8453830.1"
                     /translation="MTSARQTGYRLLGPRFDYLLHTRPAEWPIVAAHTMVGYLLAVGL
                     GGAWHGERLGPALLGVLLWVVCLNGGTLALNSAFDRDEGDIAYLHQPPPPPAHLAGFG
                     LALMSAGLAGSVLLPVAYRLVYAACLVLSVLYSVPPSRLKAVPGADWVINMLGFGTLT
                     PYAGWAATGLPVDTAGLLVLIGFCPLFAALYPLTQIYQYEEDARRGDRTLARTLGLRR
                     SLVVAVGSASLAFALFGGAAVAAGWGAADGWRWPALGLAAVAWALVLLPWVKRHAVMT
                     TQEHQRGMYRALLAWAVTDLVVVLAWGN"
     gene            complement(1031..1810)
                     /locus_tag="VGQ24_03000"
     CDS             complement(1031..1810)
                     /locus_tag="VGQ24_03000"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: protein motif:HMM:NF009855.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HEV8453831.1"
                     /translation="MLLALDIGNTEITVGIFLGDDLEAHWRLTTNPDRTPDEWGSAIG
                     GFLLQAGHSPNEVRAVCLASVAPTVTQSVVEGIAAITGCTGLLVDARSPLPVKLDVDE
                     PLTVGADRIVNVLAAVELFKSDSIVVDFGTATTFDCVTGDSRFLGGVIMPGLRTSADQ
                     LTRRAAKLPATELRAPSRVIGRRTEECIQAGVLFGTADAVDGIVRRITAEWPGGKKPR
                     VVATGGLAPIVAPLTTTIELTDPDLTLRGLRIAARHLGLEW"
     gene            complement(1819..2538)
                     /locus_tag="VGQ24_03005"
     CDS             complement(1819..2538)
                     /locus_tag="VGQ24_03005"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HEV8453832.1"
                     /translation="MTPRLLYFERVDSTMDLLHQLAADGVEAGTAVLAGEQLGGRGSR
                     GRSWQSPPGGLWLSVLFRPAAPGGVEVMSLRVGLAVAEALDGLVPHPVRLKWPNDLML
                     GERKVGGILCEARWQGPTLGWVAVGVGMNVRNAVPQELNEVATALASVRPALTVEDLV
                     QPIVSGLRKLDLGADRLTPEELKRFAQRDWLSGRDIRAPAAGRAAGLREDGALLVRPA
                     QGGEIPLRSGSVELAAVSHTR"
     gene            complement(2535..3332)
                     /locus_tag="VGQ24_03010"
     CDS             complement(2535..3332)
                     /locus_tag="VGQ24_03010"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: protein motif:HMM:NF001389.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEV8453833.1"
                     /translation="MTPDLLLKAAVLGLVEGATEFVPVSSTGHLIVVSNWLGLLDERT
                     KTFDIFIQLGAILAIVWLYRARLGRAILAARHEPGSRRFLGNLLIAFLPAAAIGFLAH
                     DSIKSRLFNPTVVAVALVAGGILILFIERWAPTPRVDDVAEVAPRTAWGIGLAQVLSL
                     IPGTSRSGATIMGGYALGLSRTAATEFSFFLAIPVMLTATSYDLLKSWSTLVPADAPV
                     FAVGFIVSFVSALVVVRAFLSYVSHHSFSAFAWYRIAFGILLLLTQA"
     gene            complement(3342..4466)
                     /gene="bshA"
                     /locus_tag="VGQ24_03015"
     CDS             complement(3342..4466)
                     /gene="bshA"
                     /locus_tag="VGQ24_03015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0071793 - bacillithiol biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-alpha-D-glucosaminyl L-malate synthase
                     BshA"
                     /protein_id="HEV8453834.1"
                     /translation="MRVGITCYPTYGGSGAVATELGLDLARRGHEVHFITYDSPFRLR
                     GYTERVFFHQVETRMGRYPLFDHFPYTLALASKQHEVVLQERLDLLHVHYAIPHATTA
                     YLAREMLNGERSLRVITTLHGTDITLVGQESSFYAITKFSIEQSDGVTAVSSYLRDET
                     YRAFGCVSCDIRVIPNFVNLQEYRPAEPGCRSQIAPVGHKVITHVSNFREVKRVKDVV
                     RVFARIRRAMPATLVMIGDGPERVDAENEGRELGVTQDVRFLGRLDTVASLLQASDLF
                     ILPSQTESFGLAALEAMACGAPVVASRAGGLTEVIDDGANGILEPVGSVEAMGRRAVE
                     LLRDPERHAAMRAAAIAKAQDFSADRIVPLYEAFYQEVLG"
     gene            complement(4579..5544)
                     /gene="miaA"
                     /locus_tag="VGQ24_03020"
     CDS             complement(4579..5544)
                     /gene="miaA"
                     /locus_tag="VGQ24_03020"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: protein motif:HMM:TIGR00174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEV8453835.1"
                     /translation="MAGAKVPVLVGPTAVGKTAVALALTAHWPLEVVSADSRQVYRLL
                     DIGTAKPTRKERARTPHHGLDLIDPGSRYSAGHFARDAVGWLADIRTRGKQPVVVGGT
                     GLYVRALVEGLFSEPSLDPARRRSLDAWTARLEPIELLRWASRLDPGFRGGGRQRAAR
                     AIEVALLSGYPLTYWQQAARARGALDPWYIVLTVPRPVLHQRIARRAEDMVRRGLIEE
                     VASVLAEGHAPNAPGLDGIGIREAVEYLHGHRGRETVAPAITIGSRQYAKRQETWFRH
                     QLAGNVLMLDATRPPEKLAREIVALWERELGARSLELEAGSSGRS"
     gene            complement(5531..7243)
                     /gene="mutL"
                     /locus_tag="VGQ24_03025"
     CDS             complement(5531..7243)
                     /gene="mutL"
                     /locus_tag="VGQ24_03025"
                     /inference="COORDINATES: protein motif:HMM:TIGR00585.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HEV8453836.1"
                     /translation="MSRRIAILPDAVADQIAAGEVVERPASVVKELVENALDAGARHV
                     RVELENGGKVLIQVSDDGSGMGREDAVLSLDRHATSKVRSAADLVGVATFGFRGEALP
                     AIASVSRLTLATHDGQTEGTELTVVGGRLDRVAPAARQRGTSVTVRGLFFNTPARRKF
                     LRSAASETRAAHEAAATLALAHPESGFELHVDGSCRLAVPPDQDQVERLAGVWGRDLA
                     GTLIPVEYAAGAFRVSGYIQRPGDAQPTGRRTQLFVNGRPFRDPFLIRAAEAGYRAAI
                     HPGDRPSLYLRIEVAPEDVDVNVHPAKLEVRFRDRIGVERVVEEAVRSALGALVAAVS
                     VGDWRPLPVAIGSLSGTGGTQLVDLEQLFPPASGDEPADALPGQPLGFEASLLQVFDS
                     YIMYQGPEGVVIVDQHSAHERVLYEAVLAQLTGNSAPAQRLLLPLTLELTDEELDAVE
                     AHGEELRRVGFEAEAFGGRTVVVHAVPSPHSRFDAAACFREMIADLARGRFGGWANRL
                     ERFAATYACRAAVKAGQRLEPREMRELLLRLFATDLPPHDVHGRATIVQLPREELERR
                     FGRR"
     gene            complement(7253..9577)
                     /locus_tag="VGQ24_03030"
     CDS             complement(7253..9577)
                     /locus_tag="VGQ24_03030"
                     /inference="COORDINATES: protein motif:HMM:NF024973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatD family protein"
                     /protein_id="HEV8453837.1"
                     /translation="MIGLILALLQAAGPELHVSVDQDRISVGEELVYTVRAVSHSSEP
                     MDLSITPVNGFEIVSRSERTEVSFSGGPTRTTVVEMRLRALRPGRWPIGPARASQGRE
                     IAEAAAIAVDVDPSPAAAATALNPRLRGLLERAPAPPRGKAAVALLVSADTVSVGEQV
                     DVVTAAWFPRDLRLQLRRPPTLQPPVIDGVWSYPQAAPAGIAATRDMAGSAYDLFVAH
                     QVVFPLLPGTIAIPSAMLKYSTPLALQFFSQEERFALTSRPDSLVVRPLPTQGRPADF
                     GGAVGSGLRLDRRITPAIAHAGEGVAVELSLKGEGNSALWPPPDITWPRSVRAYVDRV
                     DEQVSTVEGRVGGIKTFRYLVVPDSAGSVTVPAVSYAYYDLAARGYRSATVGAASLPV
                     AVGEEAATSAALPPELMPESSPALAWRITQAVPDWVWVLILLLPPIAVLVRAPLRHYR
                     RRAPAPLVETGLRAAEETLDAVVRGLVPDPDHRSRAGLAAAVRAAGADTETASRLAAL
                     RERLLARRYGPPGILVEDASLTAEVEELVTRLGGSLRGWRGRGAALGLLVGLLAAGAN
                     AQSPAPERLYESGALRAAAEGFTHRVEVEPAVAAHWYDLGATYYRLGAKGRAAAAWTR
                     ARRLDPREPTITRALRLTPPPDAASARWLWSPPVTAEELLLLGALGWIVGWIGWTLRP
                     RLRDRLTILLVFAAAAMLAGFGLRTWYRRPIAILLDQTTLRLSPHGRAPAIGPLEAGG
                     AVRIVRRERGWSLVRAAGSSEGWVASDAIAAIGG"
     gene            complement(9574..>10131)
                     /locus_tag="VGQ24_03035"
     CDS             complement(9574..>10131)
                     /locus_tag="VGQ24_03035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453838.1"
                     /translation="ARAAAEFLKEAGSGSSRDTAFYNAGAAALDARRFDVARGALEEA
                     AKSLDPDLRYRALYNLGLLGLLAAETDSTKRQEILGQAADRLREALRLQPSSARAKWN
                     LELAQRRQPPPPPSSGGGGGGGPPPPSSRGPQSPPPRSEPQNQGLSQSQAEQILNSME
                     RRERQTRAEQQRRLHGSSAGGVKDW"
BASE COUNT         1745 a         3501 c         3407 g         1478 t
ORIGIN      
        1 gatggagggg accgccgttg cgtcgtactc gcccttcggt tctgccgtcg aggtcatgcc
       61 gtctccgaga aggggtaaga gccgaagtat accgagaggt cgctcgggcg gccaagggct
      121 cagttgcccc aggcgagaac gacaacaaga tcggtgaccg cccacgcgag cagggcgcga
      181 tacatccctc gctggtgctc ctgcgtggtc atcaccgcgt gacgcttgac ccagggcagc
      241 aggaccaatg cccacgcgac ggccgccaga ccgagcgcgg gccatcgcca cccatccgct
      301 gcgccccacc cggcggcaac ggcggccccc ccaaacaagg cgaaagcaag gctggcgctg
      361 ccgactgcga cgacgaggct tcgccggagc ccgagtgtgc gggccagggt gcgatcaccg
      421 cggcgggcat cctcctcata ctggtagatc tgggtcagtg ggtagagtgc ggcaaagaga
      481 gggcagaacc cgatgagaac cagcagccct gcagtatcca ccggcaatcc cgtggctgcc
      541 cagccggcgt agggcgtcag ggtgccgaaa cccagcatgt tgattaccca atccgcgccc
      601 ggcaccgcct tgagccgaga gggcggaacc gaatagagca ctgacagcac caggcaggct
      661 gcatagacca gccggtatgc gaccggtaga aggacagatc ccgccaggcc ggccgacatg
      721 agcgcgagac cgaaaccggc cagatgagcc ggaggcgggg gcggctgatg aaggtaagcg
      781 atgtccccct cgtcgcgatc gaaagcgctg ttgagcgcga gggtccctcc attcaggcac
      841 acaacccaca gcaaaactcc aagcagcgcg ggtccgaggc gttcaccgtg ccaggcacca
      901 ccgagaccaa ccgcaagcag ataacccacc atggtgtgcg ccgccacgat gggccactcc
      961 gcgggcctgg tatggagcag gtagtcgaag cgcggcccga gcagccggta tcccgtctgc
     1021 cgagccgagg tcaccactcc aggccgaggt ggcgggcggc gattcgcaaa ccgcgcaacg
     1081 tcagatcggg gtcggtcagc tcgatggtgg tggtcagcgg tgcgacgata ggggcgagcc
     1141 ctccggtggc caccactctt ggcttctttc ccccgggcca ctcggcggtg atccgccgca
     1201 cgatgccgtc cactgcgtcg gcggtcccga acaggacgcc ggcctgaatg cactcctcgg
     1261 ttctccggcc tatgacccgg ctcggcgcgc gcagctcggt ggcaggcagc ttggccgccc
     1321 ggcgggtgag ctggtcggct gaggtgcgaa gccccggcat gatgacgcca ccgaggaagc
     1381 gggagtctcc ggtcacgcag tcgaaggtgg ttgccgtccc gaaatcgacc acgatgctgt
     1441 ccgacttgaa gagctccacc gcggcgagga cgttcacgat ccggtcggcc ccgacggtga
     1501 gcggctcgtc cacgtcgagt ttcaccggca gcgggctgcg ggcgtcgacg aggaggccgg
     1561 tgcagccggt gatggcggcg atcccttcga ccacgctctg ggtcaccgtc ggcgccaccg
     1621 acgccagaca caccgcgcga acctcgttag gtgagtgccc ggcctgcagg aggaacccac
     1681 cgatggcact tccccactcg tcgggggtgc gatccggatt ggtggtgagc cgccaatgcg
     1741 cttccaggtc gtctccgagg aagataccga ccgttatctc ggtgttcccg atgtcgagtg
     1801 cgaggagcat ggtcgaagtt accgggtgtg tgagacggcg gccaactcaa ccgaaccgct
     1861 gcggagcggg atctcgcccc cctgagcggg gcgcaccagg agcgctccat cttcccgcag
     1921 ccccgccgct cgtcctgcgg cgggcgcgcg gatgtcgcga ccgctcagcc agtcgcgctg
     1981 ggcgaaccgc ttcagttcct cgggcgtgag ccggtcggct cccagatcga gctttcgcag
     2041 gccggaaaca atcggttgta ccaggtcctc tactgtgagc gccggccgca cggatgcgag
     2101 ggcggttgcg acctcgttga gctcctgggg aacggcattg cgcacgttca tccccacgcc
     2161 caccgccacc cagcccagcg tggggccctg ccagcgcgcc tcgcacagga tgcctccgac
     2221 ctttcgctcg cccagcatga gatcgttggg ccacttcagt cggaccgggt ggggcaccaa
     2281 cccgtccagg gcctcggcca ccgccagacc cacgcgcaag ctcatgacct ctacccctcc
     2341 gggcgcggcc ggccgaaaca gcacgctcag ccagagtccg ccgggcggcg attgccacga
     2401 tcgcccacgc gagccccgcc cccccaactg ctcgccggcc agcaccgccg ttcctgcctc
     2461 caccccgtca gccgcgagct ggtgcaggag gtccatggtt gaatccaccc gctcgaagta
     2521 gaggaggcgg ggggtcatgc ctgggtcagg agcagcagga ttccgaatgc gatccggtac
     2581 catgcgaacg cgctgaagct gtggtgagag acataggaca gaaaggcgcg gaccacgacc
     2641 agggccgaga cgaaggaaac gatgaatccg acggcgaaca caggggcatc agcgggaacg
     2701 agggtggacc agctcttcag cagatcatac gaggtcgccg tgagcatgac cggaatggca
     2761 aggaagaacg agaactccgt cgccgcggtc cgggagagac ccagcgcgta accgcccatg
     2821 atggtggctc ccgagcgaga ggtgccgggg atcagcgaca gcacctgagc caggccgatg
     2881 ccccacgctg ttcggggcgc cacctcggct acgtcgtcga cgcgaggggt cggcgcccag
     2941 cgctcgatga acaggatgag aatgccgccg gccaccaagg cgaccgctac cacggtcgga
     3001 ttgaagagtc gcgacttgat cgagtcgtgg gcgaggaagc cgatcgccgc ggccggcagg
     3061 aatgcgatca ggaggttccc caggaaacgg cggctccccg gctcgtgccg cgccgccaga
     3121 atggcgcgac cgagacgggc acgatacaac cacacgatgg cgagaatggc gccgagttgg
     3181 atgaagatgt cgaaggtctt ggtccgctcg tcgaggaggc cgagccagtt gctcaccacg
     3241 atcaggtgcc ccgtcgagga gaccgggacg aactcggtgg cgccctccac cagacccagc
     3301 actgcggctt tgagcaggag atcaggggtc aacgcgccgc ctcaaccgag cacttcctga
     3361 taaaacgcct cgtacagggg aacgatccga tcggcggaaa aatcctgggc cttcgcaatc
     3421 gccgcggcgc gcatggcggc gtggcgttcg ggatcccgaa gcagctctac cgccctgcga
     3481 cccatcgctt ccacggagcc taccggctcg aggattccat tcgccccgtc gtcgatcacc
     3541 tcagtcaacc ctcccgcccg gctggccacc acgggggccc cgcacgccat cgcttcgagc
     3601 gcggcgagcc cgaacgactc ggtctgggag gggagaatga agaggtcgct ggcctggagc
     3661 agcgaggcaa ccgtatccag ccgcccgagg aagcggacgt cctgggtcac gccgagctcg
     3721 cgcccctcgt tttccgcgtc gacccgctcc ggcccgtcgc cgatcatgac cagtgtcgcc
     3781 ggcatggccc gccggatccg ggcgaacacc ctcaccacgt ccttgacccg cttcacctca
     3841 cggaaattcg agacgtgggt gatgaccttg tgcccgactg gtgcgatctg cgaccggcaa
     3901 cccggctcgg ccggccggta ttcctgaaga ttcacgaagt tgggaatgac cctgatatcg
     3961 cagctcacgc agccgaacgc gcgataggtc tcgtcacgga gatagctcga caccgcggtc
     4021 accccatccg actgttcgat cgagaacttg gtgatggcgt agaagctcga ctcttgaccg
     4081 accagggtga tatcggtccc gtgcagcgtc gtgatgacgc ggagcgaccg ttcgccattg
     4141 agcatctccc gcgccaggta tgccgtggtg gcatggggaa tggcgtagtg cacatgaagc
     4201 aagtccagcc gctcctggag gaccacctcg tgctgtttcg aggcgagcgc cagcgtgtag
     4261 gggaagtggt cgaagagggg ataccgcccc atccgggtct cgacctgatg aaagaagacc
     4321 cgctccgtgt agccccggag ccggaacggc gagtcatacg tgatgaaatg cacttcgtgg
     4381 ccccgcctgg ccaagtccag acccagctcg gtggcgaccg cgccggatcc gccgtaggtg
     4441 ggataacagg tgatgccgac tctcattgag ctgagagctg ggagccagcg gctgcgagct
     4501 ctgagcctcc ccgcacccca attcgagtcg ctacgctcat ccggcattcc atatccaacc
     4561 tcgtcgtgca gatgctcact agcttcgtcc ggaactccca gcttctagct ccaagctccg
     4621 agctcccagc tctctctccc acagggccac gatctcacgc gcgagctttt ccggcggcct
     4681 ggtggcgtcc agcatgagca cattgccggc aagctggtgc cgaaaccagg tctcctgccg
     4741 cttggcatac tggcggcttc cgatggtgat cgccggcgcc acggtctcgc gccctcggtg
     4801 tccgtggaga tattcgaccg cttcgcgaat gccgataccg tcgagacccg gcgcgttggg
     4861 ggcgtgcccc tcggcgagca ccgacgcgac ttcctcgatc aggccgcggc ggaccatgtc
     4921 ctccgcccgg cgcgcaatcc gttggtgcag caccgggcgg ggtacggtca gcacaatgta
     4981 ccacgggtcg agtgctcctc gtgcccgtgc agcctgctgc cagtaggtga gcgggtagcc
     5041 gctgagtaac gccacttcga tggcgcgggc agcgcgctgg cggccaccgc ccctgaagcc
     5101 cgggtcgagc cgggaggccc aacggagcag ttcaatcggc tcgagcctgg cggtccacgc
     5161 atccagggag cgtcgcctcg cggggtccag cgacggctcg gagaagagac cctcaacgag
     5221 ggcacgtacg tacagcccag tgccaccgac caccaccggc tgcttcccgc gagtgcggat
     5281 gtcggccagc cacccgacgg catcacgagc gaagtgacct gcgctgtagc gagagccggg
     5341 atcgatcaga tcgagaccgt gatgcggcgt gcgcgcgcgt tccttccggg tcggcttggc
     5401 ggtcccgatg tcgagcaggc ggtacacctg gcgcgagtcg gccgacacca cctcgagcgg
     5461 ccagtgtgcc gtgagcgcga gcgcgaccgc cgtctttcct accgcggtgg gcccgaccag
     5521 caccggaacc ttagcgccgg ccaaaccggc gctccaactc ctcgcggggt agctgcacga
     5581 tcgtggcccg accgtgcaca tcatgcggcg gcaggtcggt cgcaaagagc cggaggagca
     5641 gctcacgcat ttcccgtggc tcgagccgct gtccggcctt gaccgcagcg cggcaggcgt
     5701 aggttgcggc gaagcgctcc agccggttgg cccacccccc gaagcgtccg cgcgccagat
     5761 cggcgatcat ctcccggaaa caggcggcgg catcgaaccg ggaatggggc gatgggacgg
     5821 cgtgcaccac gacggtccgg ccgccgaagg cctcggcctc gaagccgacg cgccggagct
     5881 cctccccgtg ggcctccacc gcgtcgagct cctcgtcggt gagctcgaga gtgagcggca
     5941 ggagcaaccg ttgcgccggt gcgctgttgc cggtgagctg cgcgagcacc gcttcgtaga
     6001 gcacccgttc gtgggccgaa tgctggtcca cgatgacgac tccctcgggg ccctggtaca
     6061 tgatgtaact gtcgaacacc tggagcagcg atgcctcgaa gccgagcggc tgtcccggta
     6121 gcgcatccgc gggttcgtcg ccggaggccg gggggaacaa ctgctcgagg tccacgagct
     6181 gcgtcccgcc ggtaccgctg agcgatccga tcgcgacagg aagcggacgc cagtcaccta
     6241 ccgacaccgc tgccaccagc gcgcccaggg cggatcgtac ggcctcctcg accacacgct
     6301 cgaccccgat ccggtcccga aagcgcacct cgagcttggc gggatggaca ttgacatcca
     6361 cgtcctcagg ggcgacctcg attcggaggt acagggacgg ccggtcgccg gggtggatcg
     6421 ccgcgcgata ccccgcctca gcggctcgga tcaggaacgg atctctgaag ggccggccgt
     6481 tcacgaagag ctgggtgcgg cgtccggtgg gctgggcatc accgggacgc tggatgtacc
     6541 cgctcacgcg aaaggcgccg gcggcgtact ccacggggat tagcgttccg gcaagatcgc
     6601 gtccccacac tcccgccagc cgctcgacct ggtcctggtc gggtgggacg gcgagccggc
     6661 agctcccgtc cacatgcagc tcgaaccccg actcggggtg cgccagcgcg agcgtggcgg
     6721 ctgcctcgtg ggcggcgcga gtctcgctcg ccgcggagcg gaggaacttc cttcgtgccg
     6781 gtgtattaaa gaagagcccc cggacggtca cactggtgcc gcgctgccgc gccgccggcg
     6841 ccacccggtc caatcttcct ccgaccacgg tcagctcggt cccctccgtc tgaccatcat
     6901 gggtggccaa cgtcagtcgc gacaccgacg cgatcgctgg caacgcctcg ccacggaatc
     6961 cgaatgtcgc cacacccacc agatccgcgg cggaccgcac cttgctcgtg gcgtggcggt
     7021 cgagcgagag cacggcgtct tcccgtccca tgccgctgcc gtcgtcgctc acctggatca
     7081 gcaccttgcc gccgttttcc aactcgaccc gtacgtgacg agcccctgcg tcgagcgcat
     7141 tctccaccag ctccttaacg acagaggcag gacgctcgac cacctcgccg gcagcgatct
     7201 ggtccgcgac ggcgtcgggc aggatggcga tgcggcgtga catgcgggaa atctatccgc
     7261 cgatggccgc gatcgcgtcg gaagcgaccc atccctcgct ggatccggcg gctcggacca
     7321 gagaccagcc tcgctcccgg cgaacgatac gaaccgcgcc tccggcttcc agcggtccga
     7381 tcgcgggcgc ccggccgtgg ggggagaggc ggagcgtcgt ctgatcgagc aggatcgcga
     7441 tcggccgccg ataccaggtt cggagtccga aacccgcaag catcgccgcg gctgcaaaga
     7501 cgaggagaat cgtcaaccgg tcacgcaacc ggggacggag cgtccacccg atccaaccca
     7561 cgatccaacc gagcgcgccg agcaggagca actcctcggc ggtcaccggt gggctccaga
     7621 gccaccgggc cgatgcggca tcgggaggag gggtcaagcg gagagcacgg gtgatcgtgg
     7681 gctcacgagg gtcgagccgc cgggcgcggg tccatgcggc ggccgcccgg cccttggcgc
     7741 cgagccgata atacgtggca ccgaggtcat accaatgcgc ggccacggcg ggctcgactt
     7801 ccacgcggtg ggtgaaccct tcggcggcgg cgcggagcgc cccggactcg tagagtcgct
     7861 cgggcgcggg cgactgggcg ttggctccgg cggcgagcag cccgacgagc agaccgaggg
     7921 cggcacctct ccctctccat cctcgaagcg acccgccgag ccgggtcacc agctcctcca
     7981 cctcagccgt gagggaggcg tcttccacca ggatccctgg cgggccgtag cggcgggcga
     8041 gaagccgctc gcgcagcgcg gccagccggg atgcggtctc ggtgtccgct ccggccgctc
     8101 gcaccgcagc cgccaatccg gccctggagc gatgatccgg atcgggtacc aggcctcgca
     8161 ccaccgcatc gagcgtctct tcggcggcgc gaaggccggt ctccaccagc ggcgcgggtg
     8221 cccgccgccg atagtgccgc agcggcgctc gcaccagcac ggcgatgggt ggaagcagca
     8281 ggatcaggac ccagacccaa tccggcacgg cctgagtgat tcgccaggcc agcgcaggcg
     8341 atgattccgg catcagctcg ggaggcagcg ccgcggatgt ggcggcctcc tcgcccacgg
     8401 ccaccggaag cgaagctgct ccaaccgtcg ccgagcgata cccgcgagcg gccagatcat
     8461 agtaggcgta gctcaccgcc ggcacggtca cggacccggc tgagtctgga accacgaggt
     8521 agcggaaggt cttgatccca cccacccgcc cttcgaccgt gctcacctgc tcatccacgc
     8581 gatcgacgta ggctcgtacc gaacgcggcc aagtgatatc ggggggaggc cagagcgcgc
     8641 tgttcccttc ccctttcagc gagagctcga ccgcgacgcc ctcgccggcg tgtgcgatgg
     8701 ctggagtgat ccggcggtcg aggcggagcc ccgatccaac ggcgccaccg aagtcggcgg
     8761 gccggccttg agttgggagc ggccgcacca cgagcgagtc cgggcggctg gtgagagcga
     8821 accgttcctc ctgactgaag aactgcagcg ccaggggagt gctgtacttc agcatcgcac
     8881 tgggtatggc gatggtcccc ggtagcagcg gaaagactac ctggtgcgcg acgaaaagat
     8941 cgtatgcact gcccgccata tcgcgggttg ccgcgatgcc agccggcgct gcctgggggt
     9001 agctccacac tccgtcgatc acgggcggct gtagcgtggg cgggcgacgc agctggagcc
     9061 gcaggtcgcg ggggaaccac gcggccgtta ccacatctac ctgctcgccg acgctcaccg
     9121 tatcggcaga gaccaagagc gctaccgcgg cctttcctcg aggcggcgcc ggcgctcgtt
     9181 ccagcaggcc ccgcagccga gggttcaagg ccgtcgccgc ggcggcaggg ctgggatcta
     9241 catccaccgc gatggcagcg gcttcggcaa tctcgcgacc ctgcgacgct cgcgcgggac
     9301 cgatgggcca ccgccccggc cggagcgctc gaaggcgcat ctcgaccact gttgtccggg
     9361 tgggtcctcc ggagaacgag acctcggtgc gttcgctccg agaaacgatc tcgaatccgt
     9421 tcacgggtgt gatcgacagg tccatcggct cggaagagtg actcaccgcc cgcacggtgt
     9481 acacgagctc ctcccccacg gagatccgat cctggtcgac cgagacatga agctcggggc
     9541 cggcagcctg tagcagcgcg agtatgagcc cgatcaccag tccttcactc ctccagccga
     9601 actgccgtga agccggcgct gctgttcggc ccgggtctgg cgttcacggc gctccatcga
     9661 gttgaggatc tgctcggcct gactctggct cagcccctgg ttctgcggct cggagcgggg
     9721 cggcggcgat tgtggccctc tactcgacgg cggtggcggc ccacccccac ccccaccacc
     9781 actgctcggt ggtggtggag gctgacggcg ctgggccagc tccagattcc acttggcccg
     9841 ggccgatgag ggctgcagtc tcagcgcctc gcgcagtcgg tcggccgcct gtcccagtat
     9901 ctcctggcgc ttggtggaat cagtttcagc agccagaagg ccgagcagcc ccaggttgta
     9961 gagggcgcgg taccggaggt cggggtcgag agacttggcc gcctcttcca gtgcgccgcg
    10021 agccacatcg aatcgccggg cgtcaagggc tgcggcgccg gcattgtaga aggccgtgtc
    10081 ccgcgagctt ccgcttccgg cctccttcag gaattccgcc gccgcgcgcg c
//
LOCUS       DASYRV010000122        10655 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_879320, whole genome shotgun sequence.
ACCESSION   DASYRV010000122 DASYRV010000000
VERSION     DASYRV010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10655
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_879320"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..504)
                     /locus_tag="VGQ24_03040"
     CDS             complement(<1..504)
                     /locus_tag="VGQ24_03040"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEV8453839.1"
                     /translation="MTATIPPGSLAAEYDKQYRGWLERQGPHALDLAWRLRHLLWRQR
                     VLLRRYRPDGKRVLDFGCMDGVFTIRLQQLGGEAVGYDLSPAAIAQAEKFRGSAMLPR
                     FTTVAPGPGQFDLVYCNEVLEHAPDESAFIGQLLGFLAPGGVLVGTTPVGRYFWDPDH
                     KRLYDQAT"
     gene            complement(501..1688)
                     /locus_tag="VGQ24_03045"
     CDS             complement(501..1688)
                     /locus_tag="VGQ24_03045"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEV8453840.1"
                     /translation="MLLTYDFPPMGGGIARMMGELAGRYPPGTLVVSTGRYKGGPEMD
                     AGFANVVDRIGVASARLRTLQGLLAWSGRAAELARSVRPEFVWCGNFKPAGYPARWVR
                     QRVGPPYGILFYGTELLLLRSRIRRSAIKRQTARALISGAAVLVAISRWTRDLCLSVF
                     DELGFDRGTLDLRTVPLGTDPARFRPGIDPSSVRSRYGLDRGRWLLSVARLTPHKGID
                     TGLRALARLRGRYPDLSYAVVGSGGQLPALQDMAQSLGVDDRVRFLTAVPDSDLPGLY
                     NCAEIYCGLSRWTEGAVEGFGISLVEAAASGVPVVAGRSGGVPETVHEGETGLLVDPE
                     RLDEVCGALQSLLDDRALARRLGAAGRRAVETYYNWDRVTADLAGIGHEIGTRLRTEV
                     AHQ"
     gene            complement(1709..2677)
                     /locus_tag="VGQ24_03050"
     CDS             complement(1709..2677)
                     /locus_tag="VGQ24_03050"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8453841.1"
                     /translation="MDDLRWFAPNPYTTLLVPELRRRGLSISLEGNAPARLTLSMSGT
                     KAVEAWRYARARGCPLVLYIWDLHPEATSSGSYDPVWWAGGRFFRLPRVVGGFARRRG
                     YYSRLRYIAAHAREVWVPSQMTQAVVRHRFGLDTRRVPYCYDSERLRPASAARDDPPT
                     LLTVSRLQAYKNQAATIRAAARLGPGVQVRLIGRGPERDVLERLATSLAVRCRIETDA
                     DDAAVGDAYHRARVAVCPSRFEGFGLTPVEAVASGTPTVASDIPAHCEFVGRAARLFP
                     PDDVDALVEAIGAAFDGGSPDPGLVRELSIPVAVERFVGVLDPLIR"
     gene            2703..3662
                     /locus_tag="VGQ24_03055"
     CDS             2703..3662
                     /locus_tag="VGQ24_03055"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8453842.1"
                     /translation="MRIVVVGAGGARKTEASIVRAARWLGHDCRLVNVPGWSRYAGPW
                     SGRIARYLTEAFEPDLLILTRHAIELGEPVIRRLVQSRRAVFWYFDLELKEKVLQLGQ
                     LVGTMYVTYLGQVEACHAAGIEQVQFLPQGVDPGRDIPAAMAPPQYHCDTSFVGSGQS
                     RYRYDVLRAVAAASRLQIRGPGWQDAPSDLPIAGGPVYGKRLAQVIRGAAISLGASSY
                     PGQDAERFSASNRMWTILGCGGFYLGRYVDGIECFAADGRHCAWYRSPAEAAELTRHY
                     LDHPVERERIANAGRAHALAHHSYAARLLLLLAGKGYPLPTIL"
     gene            complement(3638..4510)
                     /locus_tag="VGQ24_03060"
     CDS             complement(3638..4510)
                     /locus_tag="VGQ24_03060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453843.1"
                     /translation="MVKVSGFTIVRNAIKLDFPVEASIRSILPICDEVVVNVGHSEDE
                     TLELVRSIGDPKIRVVETEWDMTRGNTVLGIETYRAMQASIHPWGVYIQADEVLHERG
                     AEELAAAIQRYNGDERVEGLLVRYLHFYGGFESIATHRRWYRREVRAIRLAPELDIRP
                     YQGAQGFRVGPHHRKIRARLTDAEMFHYGWARPSHALRQKRDLGRTMYPWRDADESRP
                     LLAWIPGIRRFTGTHPLVARRWIEARHHDPERTVEPRRFRWGFLRYYLSGLIERVIGV
                     RVFEFRNYKIVGKG"
     gene            complement(4571..5653)
                     /locus_tag="VGQ24_03065"
     CDS             complement(4571..5653)
                     /locus_tag="VGQ24_03065"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEV8453844.1"
                     /translation="MTTVMQVLHQGGGAGSVTSTLHLSLGLARSGFHVRFVCPPGSEV
                     EGQARTGGLEVHPIALASSGRLANAAALAGFLDRHPVDLVNSQSAKDRAALSWLALTR
                     RLRVPLVVTRRQMPRSFLLENWLVSRMATTVVAVSRAVGDALIRRGTPRDKLVVIPNG
                     LVTERVDGPVRPDVVAEWRRRIGWEPSRRTIGIVSRPKDQEIVLRALDQVTVPVRLVL
                     AGVEPNGPLGRLAERAPARHAAVCVPFTPDVRALYELLELVLLPSRSEGLSQALLEAM
                     ALGKPVIASAATGNLEVVRDGVDGRLVDPLAPKAWGQVIEELLSNPGAATRLGTVARH
                     TARVTYSLDRTVERTADLYRAILVGS"
     gene            5704..6633
                     /locus_tag="VGQ24_03070"
     CDS             5704..6633
                     /locus_tag="VGQ24_03070"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8453845.1"
                     /translation="MHIALYFHGRVPVHGYGGTQRVVVWLARGLAQLGHRVTLLAARG
                     SRIPGVAIVELDPRATRRPGFDLSPFLPDSLDLLHAHAPLAAPPDCPHVFTLHGNLGP
                     GRAPRPNTICLSADHASRYRARAFVYNGVDPSEFVFRRVKGEYDLFLGRLHSVKGYRW
                     AMAGAKRSGRRLIVAGGWRLSLRRSLRFVGAVHGERKADLLANAACLWMPALWDEPFG
                     LTLVEAMMSGTPVLGTRRGALPEVITDDVGALGDTLEELIELRSAIERRDPGACRARA
                     ERWFSHTRMAAEYVRMYQHYLASGNLPEGRGTT"
     gene            complement(6637..8469)
                     /locus_tag="VGQ24_03075"
     CDS             complement(6637..8469)
                     /locus_tag="VGQ24_03075"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEV8453846.1"
                     /translation="MRTELRLLRLVKPYRVLLGVGLATTFLASLLDGFTLVILIPLLK
                     HLFGTAGVLRTGSTRLEAIVDRMVEPLVAGATPGQAAARLVVLLVIGLVLKNALSYAS
                     TQISVRAQEGLVRDLRSKLFSHLLTLELGFFQRVKAGQLISGMITEVDQTKTVITASL
                     LSLFQNLIVVATTLVILSQISLRLTLLTLAFVPFLLLGLQALLRRLRGHAKARAHERG
                     EVTATVSERLGAIRLIRAYGEEEREASGFRRQAERYRKRVIRTQRFSSLTSPLTEVFA
                     GFLVILIIWAGTKPELVGLAAPLAPQTIIVFLMAALKLTSPLKTIASFPATMAVTLAS
                     AERVFEFLDQPPTEIDRPGEEPARFERDVVYDRVSFRYGDGDLVLSEVSFRLPRGKVV
                     ALVGPSGAGKTTAADLLPRFHDPSGGQILMDGVPLTRLTRSSIRALLGVVSQDTVLLN
                     DTVHVNIAYGSPGATRDQVEAAARAANAAGFIASLPEGYDTLLGERGTRLSGGQRQRI
                     AIARALLRDPPILILDEATSALDSESERLVQQAIERLMRQRTVLVIAHRLMTVRDADE
                     IVVLEEGKVVQRGSHDELLRAGGLYRRLYDLQFRDEEPVVSTHL"
     gene            complement(8471..10036)
                     /locus_tag="VGQ24_03080"
     CDS             complement(8471..10036)
                     /locus_tag="VGQ24_03080"
                     /inference="COORDINATES: protein motif:HMM:NF020249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8453847.1"
                     /translation="MPRPKSILWVDDEVESLTSHILFLEEQGFAVETSTHGDDALVLL
                     QRQPYGVVLLDEQMPGRRGLDLFQAIRAIDNGMPVVMVTKSEEPETLKDAIGQDISDY
                     LIKPVNPRQILSVVTRLLEGDRIRQQRLSRDFATRFRELEARRGGPLAWREWIELVVE
                     LAEWEVRLGQADEPGLQDALRTLQDSLRQDFARYLQRNYAKWLHEGDSDRPPLSVDIG
                     AEFLRPVLDRHGRAMLVVVDCLRLDQWAMIRPLISARFDIETAHYFSILPTATPFARN
                     AIFSGLFPAEIKARYPRWWNDHEDASLNAHEAELLTEHMRELTGRSVPVHYEKVFTAA
                     DGEGLLRRLPAHLAKDGVTALVFNFIDQLTHGRTENSTLFEVARDTPALRNLTRTWFE
                     RSPLWDALREAERRRVPVLLTTDHGSIHCHTPATVFAKRDTTSNLRYKFGDDLRAQDP
                     DSALVVDDLPSFGLPARTPGTRLLLATGDRFFVYPTKLREYQARYRGAFLHGGVSPEE
                     VLLPIALLTARQG"
     gene            10131..>10655
                     /locus_tag="VGQ24_03085"
     CDS             10131..>10655
                     /locus_tag="VGQ24_03085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453848.1"
                     /translation="MRFSSIGDILLTTPLLRAIRHRHRDARMTVLTKQAYVPLLSHNP
                     HVDRIIALGPDRSLRSLAAEVRAGSFTHRLDLHGSLRSRALRAMAPGRWTSYPKHRIA
                     RALLIHTKRNRYRDRRPVSERYFSAARDLDVSPDGAPPEFFLGADAEREAALWLAASG
                     LASDRPLIAIAPGAA"
BASE COUNT         1907 a         3560 c         3453 g         1735 t
ORIGIN      
        1 cgtcgcctga tcgtagagcc gcttgtggtc cggatcccag aagtagcgcc ctaccggagt
       61 cgttcccacc agtacgccgc ccggtgccaa aaagcctagc agctggccaa tgaacgcgga
      121 ctcgtccggc gcgtgctcga gaacctcgtt gcaatacacc agatcaaact gtcccggccc
      181 cggagccacc gtggtgaatc ggggaagcat ggctgacccg cgaaattttt cggcctgggc
      241 aatcgctgcg ggtgagaggt cgtaacctac cgcctcccca ccgagctgct gtagccggat
      301 cgtgaagacg ccgtccatac acccgaagtc gaggactcgc ttcccatccg ggcgatagcg
      361 ccggagcagc actcgctgac gccaaaggag atgacgcagg cgccaggcaa gatcgagggc
      421 gtggggcccc tgtcgctcca gccagccgcg atactgcttg tcgtattccg ctgccagcga
      481 acccggtgga atcgtagcag tcattggtgt gccacctccg ttcgaagcct cgtgccgatc
      541 tcgtgaccga ttcctgcaag atcggcggtg acgcggtccc agttgtagta ggtctccacg
      601 gcgcgccggc ctgcggcacc aagccgtcgg gcaagggcgc gatcatcgag gagactttgt
      661 agcgcgccac acacctcgtc aagccgttct ggatcgacca ggagtccagt ctcgccttcg
      721 tgcactgttt ccggcacccc gccgctgcgt ccggccacaa ccggtacccc gctggcagcc
      781 gcttcgacca gggaaatgcc gaatccctcc actgcccctt cggtccacct ggagagtccg
      841 caatagatct cggcgcagtt gtacaggccc gggagatcgc tgtcaggaac cgcggtgaga
      901 aaccgtaccc gatcgtccac tcccaggctt tgggccatgt cctgcaaggc agggagctgc
      961 ccgcccgagc ccactacggc gtagctcaga tccggatagc gcccgcgaag ccgagcgagt
     1021 gcccgcagac cggtatcgat gcccttgtgc ggcgtaagcc gcgccaccga aagcagccag
     1081 cggcctcgat cgagaccgta tcgggagcgc accgacgatg ggtcgatacc ggggcgaaac
     1141 cgagccgggt cggtgcccaa gggaacggtg cgcaggtcca gcgtgccgcg gtcaaaccca
     1201 agctcatcga ataccgagag acacagatcc cgggtccacc ggctgatcgc gaccaggacc
     1261 gcagcgccgc taatcagcgc ccgcgcggtc tgccgcttga tcgccgacct cctaattcgg
     1321 cttcgcagca gcaggagttc ggttccatag aagaggatgc cgtagggtgg gccgacccgt
     1381 tgccgaaccc accgggccgg atacccggcc ggcttgaagt tgccacacca gacaaactcg
     1441 gggcgaaccg agcgcgccag ttcggccgcg cgcccggacc aggccagcag accctgaagg
     1501 gtgcggagcc gagcactcgc gacgccgata cgatcgacca cattcgcgaa tcccgcatcc
     1561 atctcggggc cgcccttata gcgcccagtc gagaccacca gggtgcccgg cgggtagcgc
     1621 ccggccagct cgcccatcat gcgggcgata ccgcccccca tgggcgggaa gtcataggtc
     1681 agaagcatct gggtactcat tcaacaatct acctgatgag gggatcgagg acacccacaa
     1741 agcgctcgac cgccacgggg atgctgagct ctcgcaccag acctggatcg ggagagccgc
     1801 catcgaaggc cgcaccgatc gcctccacca acgcgtccac atcatcggga gggaacaagc
     1861 gggccgcccg ccccacgaac tcgcaatgcg ccggtatgtc cgacgccacc gtcggtgtgc
     1921 ccgacgcaac cgcctcaacc ggcgtgagac cgaaaccctc gaaccggctg ggacagacgg
     1981 caactcgggc gcggtggtag gcatcgccta ccgcggcatc atcggcgtcg gtctcgatcc
     2041 ggcaacgaac ggcgagcgac gtcgccagcc gttcgaggac gtcgcgctcc ggcccccgac
     2101 cgatgagacg cacctggacg cccgggccga ggcgagccgc cgcgcggatg gttgctgctt
     2161 ggttcttgta ggcttggagc cgtgaaaccg tgaggagcgt cggggggtcg tcgcgcgcgg
     2221 ccgaagcagg acggagacgt tccgagtcgt agcagtacgg gacccggcga gtgtcgagtc
     2281 caaagcgatg acgcacgacg gcctgggtca tttggctggg gacccacacc tcccgagcgt
     2341 gcgccgcgat gtagcggagc cggctgtagt atccccgcct gcgggcgaac ccgccaacca
     2401 cgcggggcag ccggaagaaa cggccgccgg cccaccagac cgggtcatag gagccggagc
     2461 tggttgcctc gggatggaga tcccagatgt acagcacgag ggggcagcca cgcgcccgcg
     2521 cgtagcgcca ggcttccacc gccttggtgc cgctcatcga cagggtcagc cgcgcaggcg
     2581 cattgccctc gagcgagatc gaaagcccgc gacgccgaag ctcggggact aatagtgtgg
     2641 tatacggatt cggcgcgaac cagcgaaggt catccaccga acggcccgtc tattataccc
     2701 cgatgcgcat cgtcgtcgtc ggagcgggcg gagcccggaa gacggaagcc tccatcgtcc
     2761 gcgctgcacg ctggctggga catgactgtc gcctcgtgaa cgtgccaggc tggtcccggt
     2821 atgccggtcc atggtccggc cggattgccc gctatctgac ggaggcgttc gagccggacc
     2881 ttctgatcct cacccgccat gccatcgagc tgggcgagcc ggtcatccgg cgcctggttc
     2941 aaagtcgtcg agcggtgttc tggtattttg acctcgagct caaggaaaag gtgttacagc
     3001 tgggacagct ggtggggacg atgtatgtca cctacctcgg gcaggtcgag gcctgtcacg
     3061 ccgccggcat cgagcaggtg cagtttcttc cccaaggcgt ggatcccgga cgtgatatac
     3121 ctgcggccat ggctccgccg cagtaccact gcgacacttc tttcgtcggc tcgggccagt
     3181 cccgctaccg gtacgacgtc cttcgagccg ttgcggccgc gagccggctt cagatccgcg
     3241 gacccggctg gcaggatgcc ccctcggacc tccccatcgc cggggggccg gtgtatggga
     3301 agcgcctcgc tcaggtgatc cggggagcag ccatctcgct gggagccagc tcgtatccgg
     3361 gacaggatgc cgagcggttc tcggcctcga atcgcatgtg gacgatcctc ggctgcgggg
     3421 gtttttacct cggtcgctac gtcgatggga tcgagtgctt tgctgccgat ggacgccatt
     3481 gcgcctggta ccggagccca gccgaggccg cggagctgac ccgccattac ctggaccacc
     3541 cggtggagcg cgagcggatt gcgaacgcag gacgggccca tgccttggcc caccacagct
     3601 acgcagcccg gctcctgttg cttttggcgg gcaagggcta ccccttgccg acgatcttgt
     3661 agttcctgaa ctcgaagacc cgtaccccga ttacccgttc gatcagcccg gacaggtagt
     3721 aacgcaggaa cccccaacga aaacggcgcg gctcgacggt ccgctccgga tcgtgatgcc
     3781 gcgcctcgat ccagcggcga gccaccaacg ggtgggtccc ggtaaatcgc cggatgccgg
     3841 ggatccaggc gagcagcggc cggctttcgt ccgcatcacg ccagggatac atggtccggc
     3901 cgaggtctcg tttctgccgc aaggcgtgcg agggccgagc ccagccgtag tgaaacatct
     3961 cggcatcggt gagccgcgcg cggatctttc ggtggtgggg gcccacccga aagccctggg
     4021 cgccttggta cggccgaata tccagctcgg gcgccaagcg gatcgctcgc acttcccgac
     4081 ggtaccaccg ccgatgggtc gcgatgctct cgaagccacc gtagaagtgc aggtagcgaa
     4141 ccagaagtcc ctcgacccgc tcgtcaccgt tgtatcgctg gatggcagca gccagttcct
     4201 ccgcgccacg ctcgtgcaga acctcatcgg cttggatgta cacgccccag gggtggatgc
     4261 tggcctgcat cgcacggtaa gtctcgatcc caaggacggt gttcccccgg gtcatgtccc
     4321 attcggtttc cacgacacga atcttcgggt cgccgatgga gcgcaccagc tccagggtct
     4381 catcctcgga atgaccgacg ttgaccacca cctcgtcgca gattggcaaa atcgagcgga
     4441 tgctcgcttc caccggaaag tcgagcttga tggcgtttcg aacgatggtg aatccggaga
     4501 ctttgaccac tatctctccc aagggggtga gctggacaat ttgctctgac ccgaaggatc
     4561 ggagcaaggg tcacgatcca acaagaatgg ctcggtagag gtcggcagtg cgctccaccg
     4621 tccgatcgag tgagtacgtt acgcgtgctg tatgcctggc cacggttccc agccgggttg
     4681 cggctcctgg gttggagaga agctcctcga tcacctgccc ccaagccttg ggagccaggg
     4741 gatccaccag ccggccgtcc acaccatccc tcaccacctc caggttgccg gtcgctgcgg
     4801 acgcaatcac cggcttcccc agggccatgg cctcgagtag cgcctgcgaa aggccctcgc
     4861 tgcgggaggg caacaggacc agctccaaca gttcatagag ggcacgcacg tcaggagtaa
     4921 agggcacgca cacagcggcg tgacgggcgg gcgcccgctc ggccagacgg cccaatggcc
     4981 cgttcggttc caccccggcc agcaccaggc ggacaggaac cgtcacctgg tcgagcgccc
     5041 gcagcacgat ctcctggtcc ttgggacggg agacgatgcc tatggtgcga cgggatggct
     5101 cccacccgat tcgtcgacgc cactccgcaa ccacgtcggg gcgaaccgga ccatctaccc
     5161 gctcggttac cagcccgtta gggatgacca caagcttgtc gcgcggggtg ccccgcctga
     5221 tcagggcatc tcccactgcc cggctcaccg cgacgaccgt ggtggccatc ctgctcacca
     5281 accagttctc gaggagaaag ctccgcggca tctgccgtcg ggtcaccacc agcgggaccc
     5341 gcagccggcg ggtaagcgcg agccagctga gcgccgcccg atcctttgcg ctctgggagt
     5401 tgaccagatc gaccgggtgc cgatcgagaa atccggccag cgcggctgcg ttcgccagcc
     5461 gaccgctgga ggcgagcgcg atcggatgga cttccagacc gcccgtacgg gcctgccctt
     5521 cgacctccga accggggggg cagacgaacc gcacgtgaaa tccggaacgt gccaggccga
     5581 ggctcagatg gagcgtcgag gtgaccgaac cggctccccc gccctggtgc agcacctgca
     5641 tgacggtggt catcgaattg cctgcttggc ggccggccca agcggccgat acattgcgcc
     5701 cgcatgcaca tcgccctcta cttccatggt cgtgtccccg tgcacggata cggtggaacg
     5761 cagcgcgtgg tcgtatggct ggctcgagga ctcgcgcagt tggggcatcg agtcacgctg
     5821 ctggcggcca gggggtcgcg gatacccgga gtcgccatcg tggagctcga cccccgggcg
     5881 accaggcggc caggattcga tctcagtcca tttctccccg attcactcga cctcctgcat
     5941 gcacacgccc cgctcgccgc acccccagac tgtccgcacg tgttcactct ccatggcaat
     6001 ctcgggccgg ggagagctcc gcgccccaac acgatctgtc tgagcgcgga ccatgcaagc
     6061 cgctaccgcg ccagggcgtt cgtctataat ggggtggatc cgtccgagtt cgtatttcgc
     6121 cgggtgaagg gcgagtacga ccttttcctg gggcggcttc acagcgtgaa agggtatcgc
     6181 tgggcgatgg cgggcgccaa gcgctcggga aggcggctca tcgtcgccgg cggttggcgg
     6241 ttaagccttc gccggagctt gcggttcgtc ggcgcggtgc atggcgagcg gaaggcggac
     6301 ctgctggcga atgccgcgtg tctctggatg ccggcactct gggatgagcc gtttgggctc
     6361 acactggtgg aggcaatgat gagcggaact cccgtgcttg gcaccaggcg gggcgcgctt
     6421 cctgaggtga tcacggacga tgtgggcgcg ctgggggata cactcgagga gctgatcgag
     6481 ctgcgctcag cgatcgagcg gcgcgatcca ggcgcatgcc gggcccgggc agagcgctgg
     6541 ttcagccaca cccgcatggc cgcggagtac gtgcggatgt accagcacta tttagcgagc
     6601 ggaaaccttc ccgaagggcg tgggacgaca taaaaatcac agatgcgtgc tgacgacagg
     6661 ctcctcatca cggaactgca gatcgtagag ccgccgatat agcccaccgg cccggagcag
     6721 ctcgtcatga cttccgcgtt gcaccacttt cccttcctcg agcaccacga tctcgtccgc
     6781 atcacgcacc gtcataaggc gatgggcaat gacaagcacg gtccgctgcc gcatcagccg
     6841 ctcgatcgcc tgctggacca gccgctccga ctcggagtcg agcgcgctgg tcgcctcatc
     6901 caggatcagg atcggcgggt cgcgcaggag cgcccgggca atcgcgatgc gctggcgctg
     6961 gccgccggag agtctggtgc cccgttcacc cagcagcgtg tcgtatccct cgggcagact
     7021 ggcgatgaac ccagccgcgt tggcagctcg ggccgcagcc tcgacctgat cccgagtggc
     7081 gcccggcgag ccataggcga tgttgacatg gaccgtgtca ttgagcagaa ccgtgtcctg
     7141 gctgacgact cccagcagcg cccgaatcga gctccgggtc agccgggtga gcgggacacc
     7201 gtccatgagg atctggccgc cactagggtc gtgaaaccgg gggagcaggt ccgcggcggt
     7261 ggtcttccct gccccggacg gccccacgag ggcaacgacc ttgccgcggg gcaaccggaa
     7321 cgacacctcg ctcagcacta ggtcgccgtc accataccgg aacgacaccc gatcgtacac
     7381 gacgtcccgc tcgaagcgcg cgggctcttc ccctggccgg tcgatctcgg tgggcggctg
     7441 gtcgaggaac tcgaacaccc gctcggcgct ggccagggtc acagccatgg tcgcggggaa
     7501 cgaggcgatg gtcttgagtg gtgacgtgag cttgagcgcg gccatgagaa acacgatgat
     7561 ggtctgcggc gcaagcggcg ctgccagccc gaccagctcc ggcttggtac cggcccagat
     7621 gatcaggatc acgaggaacc cggcgaacac ctccgtcagc gggctggtca gcgaggagaa
     7681 gcgttgggta cggatgaccc gcttccgata gcgctcagcc tgccgcctga agcccgatgc
     7741 ctcacgctcc tcttcgccat aggcccggat gagccggatc gccccgagtc gctccgagac
     7801 ggttgccgta acctcaccgc gctcgtgcgc ccgcgccttg gcatgacccc ggagccggcg
     7861 aagcagcgcc tgcagtccca gcaggaggaa gggcacgaac gcgagtgtga gcagggtgag
     7921 gcgcagtgag atctggctca ggatcaccaa cgtcgtggcc acgacgatga gattctgaaa
     7981 gagtgacaat agcgacgccg tgatcaccgt tttggtctga tccacttcgg tgatcatccc
     8041 cgaaatgagc tgcccggcct tgacccgctg gaagaaaccg agctccaacg tcagcagatg
     8101 ggagaagagc ttggaacgca ggtcccgcac aagcccttcc tgggctcgca ccgagatctg
     8161 ggttgatgcg tagctgagtg cgttcttcag caccagcccg atcaccagga gtacgaccaa
     8221 gcgagcagcg gcctgacccg gcgtcgctcc ggccacgaga ggctcgacca tgcgatccac
     8281 tattgcctcg agccgggtcg agccggtccg aaggacccct gccgtgccga acaagtgctt
     8341 gagcagcgga atcaggatga cgagggtgaa gccatcgagc agtgaagcga gaaacgtggt
     8401 ggcgagtccg acacccagaa ggacccgata cggtttgacg agccggagga gtcggagctc
     8461 ggtccgcacg ctatccctgg cgtgctgtca gcaaggcgat cggcaggagt acctcctcgg
     8521 gcgacacccc accgtggagg aacgcgccgc ggtagcgcgc ctgatattct cgcaacttgg
     8581 ttgggtagac gaagaatcgg tcgcccgtcg ccagcagcag acgggtgccg ggtgtgcgtg
     8641 cgggtaagcc gaagctcggc aggtcgtcta ccaccaacgc cgagtcgggg tcctgggccc
     8701 ggagatcgtc cccgaacttg tagcgcaggt tcgacgtggt gtcccgcttg gcaaagaccg
     8761 tagcgggcgt atggcaatgg atcgagccgt gatccgtcgt gagcaacacc ggaacccggc
     8821 gacgctcggc ctctcgcagg gcatcccaca agggtgaccg ctcgaaccag gtgcgggtca
     8881 gattgcggag cgcgggtgtg tcacgagcta cctcgaacag ggtcgagttc tcggtccggc
     8941 cgtgggtgag ctggtcgatg aagttgaaca ccagcgccgt gacgccgtcc ttggccaggt
     9001 gcgctggcag ccgcctcagc agtccttcac cgtccgcggc ggtaaagacc ttctcgtaat
     9061 gcaccggaac cgaccgcccg gtcagctccc gcatgtgctc cgtcagcaac tcggcttcgt
     9121 gggcgttgag gctcgcgtcc tcgtgatcgt tccaccaccg ggggtagcgg gccttgatct
     9181 ccgccgggaa gagtccactg aagatggcgt tgcgggcaaa cggggtggcg gtcggcagga
     9241 tggagaagta atgcgccgtc tcgatatcga acctggcact gatcagcggg cggatcatgg
     9301 cccactggtc gaggcggagg cagtccacca cgacgagcat tgcccggccg tgccggtcga
     9361 gcaccggtcg caggaactcg gcaccgatat ccaccgagag cggcggccgg tcactgtcgc
     9421 cctcgtgcag ccacttggca tagttccgct ggaggtaacg ggcgaagtcc tgccgcaggc
     9481 tgtcctgcag cgtgcgcagc gcgtcttgga gtcccggctc gtcggcctgc cccagccgga
     9541 cttcccactc cgccagctcc accaccagct cgatccactc gcgccacgcg aggggtccgc
     9601 cgcgccgcgc ctcgagctcg cgaaagcggg tagcgaaatc gcgtgacagc cgctgctggc
     9661 ggatccggtc gccttcgagc agccgggtga ccaccgagag gatctgccgg ggattcaccg
     9721 gcttgatgag atagtcggag atgtcctggc caatggcgtc cttgagcgtc tccggttctt
     9781 cgctcttggt caccatcacc accggcatgc cgttgtcgat ggcccgaatg gcctgaaaga
     9841 ggtccagccc acgacgcccg ggcatctgct cgtcgagcag gacgacaccg tacggctggc
     9901 gctgaagcag aaccaaggcg tcgtctccgt gggtgctggt ttcgacggcg aagccctgtt
     9961 cttccagaaa caggatgtgc gacgtgaggc tctccacctc atcgtccacc cacaggatgc
    10021 ttttgggacg cggcatgctc gaatcttagc gacacgtcgt gagaagtgag aggtcttacc
    10081 gctcacctct caccgctaca gtttaccgca tgcttccaaa cgttttagcc gtgcgcttca
    10141 gctcgatcgg cgacatcctc ctgaccactc ccctgctccg tgcgatccgg catcgccatc
    10201 gggacgcacg catgacggtg ctcaccaagc aggcctacgt tccgctgctg agtcacaatc
    10261 cgcacgtgga tcggatcatc gcgctcgggc cggaccggtc gcttcgaagc ctggccgcgg
    10321 aagtcagagc cggctcgttc acccatcgcc ttgacctcca cggcagcctt cgcagccgcg
    10381 ccctccgggc aatggccccg ggacgctgga cctcatatcc gaagcaccgg atcgctcgcg
    10441 cgctgctcat ccacaccaag cggaatcgct atcgcgatcg gcgtccggtt tccgagcgct
    10501 acttctcggc ggcgcgcgat ctggacgtct cgcccgacgg cgcaccgccg gaattctttc
    10561 ttggtgccga cgccgagcgc gaggccgccc tctggcttgc ggcctcggga ttggcatccg
    10621 accgaccgct gatcgcgatt gctcccggcg cggct
//
LOCUS       DASYRV010000123         2725 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1062833, whole genome shotgun sequence.
ACCESSION   DASYRV010000123 DASYRV010000000
VERSION     DASYRV010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2725
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1062833"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1063)
                     /gene="hisD"
                     /locus_tag="VGQ24_03090"
     CDS             complement(<1..1063)
                     /gene="hisD"
                     /locus_tag="VGQ24_03090"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF013013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEV8453849.1"
                     /translation="MPRGSSLIRRIVVPPFEALEPFLSRLAGADPDTRRAVDDILQDV
                     LARGDAAVQEYTLRFDGVDLAPSSWELESSAWHDALERIPAGLREALTQAVHQVSQYH
                     QRQRDTGFHLADADGSIVGMKVTPLDRVGLYVPGGKASYPSSVVMNAVPALVAGVQEI
                     IAVVPPSGVTDAVLAACALSGVTRVFRVGGAQAIAALAYGTRTIPRVDKIVGPGSRWV
                     AEAKRQVVGRVGIDMIAGPTELLIIADAIARPDRVAADMIAQAEHDEDATSWCVTTDP
                     DLAEALSAALEWALDRTPRAAIARAALERNGLIVLAGSMRDAIEVVNRRAPEHVQIAA
                     EGAERIAKAIRNAGAIFMGD"
     gene            1074..2432
                     /locus_tag="VGQ24_03095"
     CDS             1074..2432
                     /locus_tag="VGQ24_03095"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEV8453850.1"
                     /translation="MLRLNDMEESQPGSIGLRLLAVLVLVVANAFFVAAEFALVSARR
                     TRIEALIRQGDRKAKAVRAAQQDLYRQLSAAQLGITVASILLGFVAEDTVAYFFRDWL
                     ARLPGWLAFLGRAGVASAIAISLISFLHVVFGEQAPKAVAITHPETVSRWVATPLLIF
                     SWITRPATGLLNSSANWVIRLMGIKGASPELERIHSPEEIRILVEQSEEGGSLQQQDA
                     RLLEGVFEFSEKTAQEVMTPRTQMAALDADLTVEAAADQVAITGRSRYPAYTDSLDEI
                     IGVVHAKDILGALRSRPGQTIRTILRPPLFVPGTREVEDVLADMKRLKTHLAIVLDEY
                     GGTAGLVTMEDLLEEIVGPIYDEHDLQDRVDATEGAPRIDGSMPISEFNSQSDAALDD
                     TDYTTIGGYIFGQLGHLPRVGDRVTVGPWTFEVVEMEGRRVKTVRLHTSKPEESAAPK
                     PA"
     gene            2465..>2725
                     /locus_tag="VGQ24_03100"
     CDS             2465..>2725
                     /locus_tag="VGQ24_03100"
                     /inference="COORDINATES: protein motif:HMM:NF024785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEV8453851.1"
                     /translation="MFPTSFAAIPPGALDLTGEAVRRRRSLQRAAMDTLEHAGYEELL
                     PPTFEYEDTFLRAGGAGVAERLVRFPDRDGRILALRYDFTASL"
BASE COUNT          452 a          931 c          895 g          447 t
ORIGIN      
        1 cgtcgcccat gaagatggcg cccgcgttcc ggattgcctt cgcgatccgt tcggcaccct
       61 cggcggcaat ctgaacatgc tcgggagccc ggcggttcac cacctcgatg gcatcccgca
      121 tcgacccggc caggacgatc aggccgtttc gttccagggc cgcacgggcg atggcggcac
      181 gtggggtacg atcaagcgcc cattccagcg cggccgacag cgcctccgcg agatccgggt
      241 ccgtcgtcac gcaccaactg gtggcgtcct catcgtgctc ggcctgggcg atcatatcgg
      301 cagccacccg gtcgggccgg gcgatggcat cggcgatgat gagcagctcg gtcggcccgg
      361 cgatcatgtc gattcccacc cggccgacga cctgccgctt agcttccgct acccagcggc
      421 tccccggccc gacaatctta tccacccggg ggatggtccg ggtgccgtag gccaacgcgg
      481 cgatcgcctg agcccctccc acccgaaaca cccgggtgac cccggagagt gcgcaggcgg
      541 ccagcacggc gtcggtgacc ccgcttggcg ggacgaccgc gatgatctcc tggaccccgg
      601 ccaccagcgc cggcaccgcg ttcatcacga ccgaggacgg ataggaggct ttgccaccgg
      661 gcacgtagag tcccacccgg tccagcggag tcaccttcat gccgacgatg ctgccgtcgg
      721 catcggccag gtgaaacccc gtatccctct gacgctgatg gtactggctg acctggtgga
      781 cggcctgggt cagcgcctcc cggaggccgg ctgggatccg ctccagggcg tcgtgccaag
      841 cggacgactc gagctcccag gaggatggcg cgaggtccac cccatcgaac ctgagcgtgt
      901 actcctgcac ggcggcgtcg ccccgggcca ggacgtcctg gagaatgtca tcgaccgccc
      961 ggcgggtatc cgggtctgca cctgcgagtc gggaaaggaa gggctcgagg gcttcgaagg
     1021 gtgggacgac aatccgacga atcagcgaac tccctcgcgg caagatcccc tcaatgttac
     1081 gcttgaacga tatggaagag tcacagccgg gctcgatcgg cctgcgtttg ctggcggtgc
     1141 tggtcctggt agtcgcgaat gcgttcttcg tcgcggccga gtttgccctc gtgtcggccc
     1201 ggcggacccg cattgaggcg ttgattcggc agggcgatcg gaaggctaag gcggtgcggg
     1261 cggcgcaaca agacctttac cgacaactat ctgccgcaca gctcgggatt acggtcgcct
     1321 caatcctgct cggtttcgtg gccgaagaca cggtggccta cttctttcgc gactggctgg
     1381 cccggctccc gggctggctc gccttcctcg gccgcgccgg ggtcgcatcc gccatcgcga
     1441 tctcgctgat ctccttcctc cacgtggtct tcggtgagca ggcccccaaa gctgtcgcca
     1501 ttacccaccc agagacggtg agccgctggg tcgccacccc gctgttgatc ttctcgtgga
     1561 tcaccaggcc tgccaccggc ctgctcaact cgagcgccaa ctgggtgatc cggctcatgg
     1621 gaatcaaggg cgcatcgccg gagctggagc ggattcactc tcccgaagag atccggatac
     1681 tggtggagca gagcgaggaa ggagggagcc tacagcagca ggatgctcgc ctgctcgagg
     1741 gggtcttcga gttcagcgag aagacggcgc aggaagtcat gaccccgcgg acccagatgg
     1801 cggcgctcga tgccgacctc accgtcgagg ccgcggccga ccaggtggcg atcaccggac
     1861 gttcgcgcta tccggcctat accgactcac tcgacgagat catcggcgtg gtgcacgcca
     1921 aagacatcct gggcgcgctc cgctcccggc cggggcagac gattcgcacg atattgcgtc
     1981 cgccactctt cgtgcccggc acccgcgagg tggaggatgt gctcgccgac atgaagcggc
     2041 tcaagaccca cctggccatt gtgctcgacg aatacggcgg aacagcgggc ctggtgacga
     2101 tggaggacct gctggaggaa attgtgggcc cgatctacga cgagcacgat ctccaggatc
     2161 gagtggacgc gacggagggc gccccgcgca tcgacggctc gatgccgatc tcggagttca
     2221 acagccagtc cgacgcggcg ctggatgata ccgactacac caccatcggt ggctacatct
     2281 tcggccagct cgggcatctg ccccgggtcg gagaccgggt caccgtcgga ccgtggacgt
     2341 tcgaggtggt cgagatggag ggccgccggg tgaagacggt tcgcctccac accagcaagc
     2401 ccgaggaaag cgccgctccc aagccggcct gacggctccc gcggggcaga gttaccttcg
     2461 cttcatgttc cccacgtcgt tcgccgcgat ccctccaggc gctctcgatc tgaccggcga
     2521 ggccgtgcgc cgccgccgct cgctccaacg cgccgcgatg gacacgctcg agcatgccgg
     2581 ctacgaggag ctcctcccac cgacgttcga gtatgaggac acgttcctcc gggcaggcgg
     2641 cgctggtgtg gcggagcggc tggtacgctt ccccgaccgg gacggtcgga tcctggcgct
     2701 ccgatacgat ttcacagcca gtctg
//
LOCUS       DASYRV010000124         2988 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1292503, whole genome shotgun sequence.
ACCESSION   DASYRV010000124 DASYRV010000000
VERSION     DASYRV010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2988)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2988)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2988
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1292503"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1006)
                     /locus_tag="VGQ24_03105"
     CDS             complement(<1..1006)
                     /locus_tag="VGQ24_03105"
                     /inference="COORDINATES: protein motif:HMM:NF014074.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453852.1"
                     /translation="MRHWFWLTLASLAGPGQLAQAQVPAVYRITVSGVVEHGLAPYIA
                     RSLREAEAQGAVAAILDMDTPGGRIDAAERIADAVRGSRIPVYAYVNPRAYSAGALIA
                     IASNGIYMRPGAVIGAATPVDGQGVKASEKMVSAMRAEFRSLAEQRGLDPKLAEAMVD
                     ENVEIPGVVQKGQLLTLSTSEAVRLGFAKGQVADESELLTAIGHPHAQIITSEPNWAE
                     GVVGFLTNPLVAPLLLSLGILGLVFEIKTGAFGVGGILSLVSLGLFFGSSLILGLAGW
                     EEVLLLGLGAIALAVEIFVLPGFGVAGVAGVLAIVTSMVLAMIGQHPSTGDVAQALAV
                     L"
     gene            complement(1169..1705)
                     /locus_tag="VGQ24_03110"
     CDS             complement(1169..1705)
                     /locus_tag="VGQ24_03110"
                     /inference="COORDINATES: protein motif:HMM:NF019430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEV8453853.1"
                     /translation="MRNHVLCSLILAAAPLYPAAAQQADSAAKTDSLRHRIEERFAVR
                     VQEELGLTNEQTAKLRATSQRFSVRRRELHARHRQLREALSGQLRPGVAANQDSVAKL
                     TDAMIELRVASAQATRDEMREVAKYLTPVQRARFFVMRDRLHHHMKEAREHRGMRGGR
                     EGRDRWKGHERGMGEPHE"
     gene            complement(1705..2223)
                     /locus_tag="VGQ24_03115"
     CDS             complement(1705..2223)
                     /locus_tag="VGQ24_03115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453854.1"
                     /translation="MSDCGWLSDRMPAVALGRSTWTVEEVGHLGRCRSCQDEWDLVRL
                     SGRLGKDIGVELDPTATTRAVLHRLARSGEEARRRRKAWGFAALASAAAVAVMVWAGR
                     PATIPSPPARAPIVASLQIQLPELDYLLPAELNAVLQTLDQPYVGGPAADSAAGDPDD
                     EDLDSGFDTWEG"
     gene            complement(2220..2777)
                     /locus_tag="VGQ24_03120"
     CDS             complement(2220..2777)
                     /locus_tag="VGQ24_03120"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEV8453855.1"
                     /translation="MSASTTPQSRSTAESDPALVAAYRLGDERAAGELIQRHIAALGR
                     FLYSSGADRDEVDDLVQETLFRAFRRLASWRGEASFRSWLFTIGHNLLRDHFRSRKSY
                     RALSLDQDVPGQSDPHSDLAATEAEERIRQGLAGLPRLQREVFLLRAQEGIEYEEIAV
                     ELGTTPGAARVHYHHAVKRLKELVR"
BASE COUNT          547 a         1006 c          942 g          493 t
ORIGIN      
        1 cgagcaccgc gagcgcttga gccacatcac cggtagaagg atgctgaccg atcatggcga
       61 ggaccatcga ggtgacgatc gccagaacac ccgccacgcc ggccacgccg aacccgggga
      121 ggacgaagat ctcgaccgcc agcgcgattg caccgagccc cagcaagagc acctcttccc
      181 accccgccag gccgagtatc agactggagc cgaagaacaa accaagagag accaggctga
      241 ggatgccacc gaccccgaac gcgccggtct tgatctcgaa aacgaggccc aggatgccaa
      301 gcgagagcag cagcggcgcg acgagcgggt tggtgaggaa gccaacgacg ccctccgccc
      361 aattgggttc ggatgtgatg atctgggcgt gcggatgacc gattgccgtg agaagctcgg
      421 actcatccgc cacctgtccc ttggcgaagc cgagtcgaac agcctcgctg gtactcagtg
      481 tcagtaactg ccctttctgc accacgccgg ggatctcgac attctcatcg accatcgctt
      541 cggcgagctt cggatcgagg ccccgctgct cggctaacga cctgaactcg gctcgcatgg
      601 cggacaccat cttctccgac gccttcaccc cctgtccgtc caccggggta gcggcaccga
      661 tgaccgcacc gggccgcatg tagatcccgt tcgaagcgat ggcgatgagc gcgccggcgc
      721 tgtacgccct cggattcacg taggcataca ctgggattcg cgacccgcgc acggcgtcgg
      781 ctatccgctc agccgcgtcg atccgccccc caggggtatc catatccaga atggcggcaa
      841 cggccccctg agcctcggcc tcccggaggc tccgcgcgat gtacggagcc aggccgtgct
      901 cgaccacacc cgatacggtg atgcggtata cggcagggac ttgagcctga gccagctgcc
      961 cgggcccggc cagactggcg agcgtcaacc agaaccagtg gcgcatcgcg agatatcctg
     1021 tggggagagt ggaggaaatc tagcggggtg gcgcggaacg ggtaggttcg caggcttgaa
     1081 gagggccaga cagcgtgaac ggtaaacagt gaacattaaa caggactgaa cactcgttta
     1141 ccgtttacgg ttcaccgttc acgcttttct actcatgagg ctctcccatc ccgcgctcat
     1201 ggcccttcca gcggtcccga ccttctctgc caccccgcat gccgcggtgt tcgcgagcct
     1261 ccttcatgtg atgatggaga cggtctcgca tcacgaagaa ccgggcgcgt tgcaccggcg
     1321 tgagatattt cgcgacctcc cgcatttcat cgcgggtggc ctgagccgat gcgacgcgca
     1381 gctcgatcat cgcatccgtg agcttggcga cgctatcctg attggccgcc acaccaggcc
     1441 tgagctgccc gctcaatgcc tcgcgcagct gacggtgccg ggcgtggagc tcgcgccggc
     1501 gcacgctaaa ccgctggctc gtggcccgga gcttggcggt ctgttcgttg gtgagaccca
     1561 gctcctcctg cacccggacg gcgaaccgct cctcgatacg atgcctgagc gagtcggtct
     1621 ttgccgccga gtcggcctgc tgcgcggcgg ccggatacag cggggccgca gccaggatca
     1681 acgagcacag tacgtgatta cgcatcaacc ctcccaggtg tcgaatccac tatcgagatc
     1741 ttcatcgtcg ggatctcccg ccgccgagtc cgcggccggg ccgccgacgt acggctgatc
     1801 cagcgtctgc aacacggcgt tcagctcggc ggggagcagg tagtccagct cggggagctg
     1861 gatctggagg ctcgccacaa tcggtgccct ggccggtgga gacgggatgg tcgcaggtcg
     1921 gccggcccag accatcaccg ctactgccgc cgcgctggct agagccgcga agccccatgc
     1981 cttccggcgg cggcgggcct cctctccgct gcgtgccaga cggtggagca cggctcgagt
     2041 ggtagcggtg ggatcgagct ctactccgat atctttcccc agccggccgg agagccggac
     2101 cagatcccac tcatcctggc acgaacggca gcggccgaga tgcccgacct cctccaccgt
     2161 ccaggtcgat cggccgagcg ccactgccgg catccggtcg gacagccaac cacagtcgct
     2221 catcgaacca gctccttcaa ccgcttcacc gcatggtggt agtggactcg tgcagcaccg
     2281 ggggtagtgc cgagctccac ggcgatctcc tcgtactcga ttccttcctg cgcccggagg
     2341 aggaacactt cgcgctgcag tcggggaagg cccgcgagtc cctgccggat tcgttcttcc
     2401 gcctccgtcg cggcgagatc cgagtgggga tcgctctggc cgggtacatc ctgatcgagc
     2461 gacagcgctc ggtagctctt ccgtgaccgg aagtgatcgc gcaggaggtt atgtccgatg
     2521 gtaaagagcc agcttcgaaa cgacgcctcg cctcgccagc tcgccagccg gcggaacgcc
     2581 cggaagagcg tttcctgaac caaatcatcc acctcatccc gatccgctcc ggaggagtag
     2641 agaaatcgcc cgagcgcggc gatgtggcgc tggatcagct cgccagccgc ccgctcgtca
     2701 ccgagacggt aggcggccac cagagccgga tcggattcgg cggtactcct ggattggggc
     2761 gtcgtggagg cgctcatcca aaccctgaga cgaaaagggg gaagggttgt taacttggcc
     2821 ccgtcggtcg ggggacgcta tcttagcccg atgagacgcc cgagcgtgat cgcccaccgc
     2881 ggcgcttccg gatacgaata cgagaactca cgagccgcct tccggcgtgc aatcatgctg
     2941 gacgccgatg gtgtggagct cgatgtccac gccaccagcg atggtggg
//
LOCUS       DASYRV010000125         3479 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1709483, whole genome shotgun sequence.
ACCESSION   DASYRV010000125 DASYRV010000000
VERSION     DASYRV010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3479
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1709483"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..537
                     /locus_tag="VGQ24_03125"
     CDS             <1..537
                     /locus_tag="VGQ24_03125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453856.1"
                     /translation="VLVLLFSLASRFLSGVLETIVCAVVLLIGLAAVTMLPGLWIRPR
                     TIEGLAGAAGIGLGAAGVFLLVDVILLQNIGTYTARWYDVGGGSNWWYHPVWWMVGTF
                     LPWMGAWILANQTVRRGVPSAINGFAIAVGLSALLAVLAVLLGFPGARWTLGTFAVAF
                     LPGLLLATVVSAIGARQA"
     gene            542..874
                     /locus_tag="VGQ24_03130"
     CDS             542..874
                     /locus_tag="VGQ24_03130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453857.1"
                     /translation="MRWLRLFFRIFGWLLTPFLAWAASFFGAVAGALLALKLDDPVRG
                     LAVTAICGGIAGFAALIGWLHYLRRSPEIREVLAVTEDGTPDTTEFVIEPDVPASEVS
                     APQPSQTT"
     gene            1284..2273
                     /locus_tag="VGQ24_03135"
     CDS             1284..2273
                     /locus_tag="VGQ24_03135"
                     /inference="COORDINATES: protein motif:HMM:NF013073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEV8453858.1"
                     /translation="MSQPRRLLRLMLLGVALSGQTPSAGAQTVEARAGRFFDSGGWAT
                     YRIGLRQPLRGILGVGFHGDLLRAVGANGGMAGVGADLTAFRTGTEGPYLVAGLSGGL
                     GSQTSNDLSNGWGSWSAGVGYDVFPASFLSVGVEGRWRELSLGRRDGFELGVGLTLHL
                     GGGSPPAGSRPVPGPIANPPGGSESLPPFPYAGVQAEPASLADSIVAAAAAAMGRPYE
                     FGGTGAGGGGFDCSGLIQYAYKKHGIVLARRSVDQAKEGRKVDRKLDRLRPADLLTFS
                     NRGGPVTHVGLYMGGGRFIHSATRGVQISTLSAQDPYGRWWYKRWVGVRRIVQ"
     gene            complement(2298..>3479)
                     /locus_tag="VGQ24_03140"
     CDS             complement(2298..>3479)
                     /locus_tag="VGQ24_03140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453859.1"
                     /translation="TRFGRDKIARRLWGAQWPFMTTPTLGVRMMLWSWILGASLAAGS
                     DGPAPPPLVRISVDSVRHELTVTSGPFDLPNLPPMDDHAIMDLGMSHDTPIQRFEWPV
                     EGWFRGFRVTLTDAHGQPVPRHVMHHLIMVNFSRRQLLYSAAERLMGAGTETDDEVSV
                     PKTIGVPMKPGMGLGMYVAWHNDTGKDLNDVYLHVTMLWTPKNQNPPPVNALPIYMDV
                     NLTVGGSNTFDVPPGRSTKAYEFTLPVGGRLLGVGGHMHDYGSRVRLEDAATGKVLTQ
                     VLAEREPDGKLVKMSRKLFGVTGEGLKLKAGHRYRVVGQYDNPTGETRVKGAMAHMVG
                     LFVPDDMKRWPAINPQDATYQRDMASLQVRGEGSMSGMHHEHGQESGMHNDPHQGQDT
                     H"
BASE COUNT          516 a         1115 c         1165 g          683 t
ORIGIN      
        1 gttctcgtgc tgctcttctc gctggcatcg cggtttctga gcggcgttct cgagaccatc
       61 gtctgcgcgg tcgtcctgct gatcgggctg gcggcggtca ccatgctccc gggtctctgg
      121 attcgcccgc gcaccatcga aggccttgcg ggcgccgccg ggattggtct gggcgcggcg
      181 ggtgtcttct tgctggttga cgtgatcctg ctccagaaca tcgggaccta caccgctcgg
      241 tggtacgatg tgggcggggg cagcaattgg tggtaccacc cagtgtggtg gatggtgggg
      301 acgtttctgc catggatggg agcatggatc ctcgccaacc agaccgtaag gcgcggggtg
      361 ccatcggcca tcaatggatt cgcaatcgcc gtgggattga gcgcgctgct agcggtgctg
      421 gctgtcctgc tggggtttcc gggagcccgc tggacgctgg gcactttcgc cgtggcattc
      481 ctgccagggc tactcctcgc caccgttgtt tccgccatag gggcacgaca ggcctgagcc
      541 catgcgctgg ctccgcctgt tctttcgcat cttcggatgg ctgctcaccc cttttctcgc
      601 gtgggcagcc tccttcttcg gagcggtggc cggcgccctg ctggccctga agctggacga
      661 tcccgtgcgc ggattggcgg tcacggccat ctgtggtggg attgccgggt ttgctgcgct
      721 cattggctgg ctgcattatc tgcgacgctc cccggagatc cgtgaggtcc tcgcggtcac
      781 ggaggacggc acgccggata ctacggagtt cgtcatcgag cccgacgtgc ccgcgtccga
      841 ggtctctgca ccccagccct ctcagacgac ctgatggccg cctgccgctc ccctcgacag
      901 cgaagttgct ttgcgctcgt cctgctggtt gcccttgtgg gcgcctgccg agcggaggag
      961 cggccgcgcc ctcgggacga cgccgcagcc ccatccgtgc gcgactcact tgtggcaagc
     1021 agcgacgatg gcctggaagt ctggttcacg ctcaccagag tcggccgggc tccggatggt
     1081 acctcatgcg tcgagcgagg actcgagatc cggcaccgcg gtacccgcat ccaagtgccc
     1141 ctgttgtaca ctgggactcc tccggtactc ctcgaccaat cgacaatgcg cgctgagctc
     1201 tggaatcact gccggcccgt tggtacgtac ctggttgatc tgcggagcgg ccggccggtg
     1261 cgcgaacact cggggagcac ctgatgagcc aaccacgccg gctcctccgt ctcatgctgt
     1321 tgggagtggc gctctccggc cagaccccga gtgccggtgc gcagaccgtc gaggctcgtg
     1381 ccggccggtt cttcgactca ggtggatggg caacctatcg gatcggcctg cgccagccac
     1441 tcagggggat tctcggggtg gggtttcacg gcgacctgct gagggcggtt ggtgccaatg
     1501 gtggcatggc cggcgtgggt gccgacctga ccgcgtttcg tacgggaacc gagggtccct
     1561 accttgtcgc ggggttgagc ggcggcctcg gctcgcaaac gtcgaacgac ctctccaacg
     1621 gctggggctc ctggtctgcg ggcgtgggct acgatgtctt ccccgcgtca ttcttgtccg
     1681 tgggtgtcga aggccgttgg cgtgagctgt cgctcggccg gcgtgacggg ttcgagctcg
     1741 gagtaggact gactctccat ctgggcggcg gttctccgcc ggccggctcg cgcccggttc
     1801 ctggtccgat cgccaatccg ccgggaggaa gcgagagctt gcctccattc ccatatgccg
     1861 gggttcaagc cgaacccgcc agcctggccg actcgatcgt cgcggcggcg gcagcggcaa
     1921 tgggacgccc ctacgagttt ggcgggacgg gagctggagg cggaggattc gattgctccg
     1981 gactcatcca gtatgcctac aaaaagcacg gcatcgtact ggcgcgtcgg agcgtcgatc
     2041 aagcgaagga gggcagaaaa gtagatcgaa agctggatcg cctcagaccg gccgatctgt
     2101 tgaccttctc gaaccgtggc ggcccggtga cccacgtcgg gctctatatg ggcggaggtc
     2161 gcttcatcca cagcgcgacc cgaggcgtgc agatcagtac gctgagcgca caagatccct
     2221 acggcaggtg gtggtacaag cgctgggtcg gggtgcggcg tatcgtccag taaggagggg
     2281 cgcaccccga gccatcgcta gtgggtgtcc tgtccctggt ggggatcgtt gtgcatgccg
     2341 gattcctggc cgtgctcgtg gtgcatcccg gacatcgagc cctccccgcg cacctgcagt
     2401 gaggccatgt cccgctggta ggtggcatcc tggggattaa tagccggcca gcgcttcatg
     2461 tcgtcgggga cgaagagccc gaccatgtgc gccatcgcgc ccttcacccg ggtctctccc
     2521 gtcgggttgt cgtactgccc caccacacga tatcggtgcc cggctttgag cttgagcccc
     2581 tcgccagtca ccccgaacag cttccggctc attttcacca gcttgccatc cggctcgcgc
     2641 tccgccagta cctgggtgag caccttccca gtggccgcat cctcgagccg gactcggctg
     2701 ccgtagtcgt gcatgtggcc gccgacaccg agcagccgtc cgccgacagg gagcgtgaac
     2761 tcgtacgcct tggtggaacg gcccggcggg acatcgaagg tgttgctgcc gccaaccgtg
     2821 aggttcacat ccatgtaaat cgggagcgcg ttgaccggcg gcggattctg gttcttgggc
     2881 gtccacagca tggtgacgtg gaggtacaca tcgttcaggt ccttgcccgt gtcgttgtgc
     2941 cacgccacgt acatgccgag gcccatgccc ggcttcattg gcacgccgat ggtcttcggc
     3001 acactcacct cgtcgtcggt ttccgtcccc gcgcccatca accgctcggc cgccgagtag
     3061 agcagttggc ggcggctaaa attcaccatg atcagatggt gcatgacgtg ccggggaacg
     3121 ggctggccgt gtgcatcggt gagtgtgacc cggaagcccc ggaaccagcc ctccaccggc
     3181 cactcgaagc gctgaattgg ggtgtcgtgg gacatgccca ggtccattat ggcgtggtcg
     3241 tccatgggcg gcaggttcgg caggtcgaag ggcccactgg tgacagtcag ctcgtgacgt
     3301 accgaatcaa cggagatgcg tactagcggc ggcggggcag ggccgtccga gccggcggcg
     3361 agcgatgctc cgagaatcca actccacagc atcatgcgca ctcccaaagt tggcgtggtc
     3421 ataaacggcc attgcgcgcc ccaaagtcga cgcgcaattt tgtcgcgtcc gaaccgtgt
//
LOCUS       DASYRV010000126         6864 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1501202, whole genome shotgun sequence.
ACCESSION   DASYRV010000126 DASYRV010000000
VERSION     DASYRV010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6864
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1501202"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(160..600)
                     /locus_tag="VGQ24_03145"
     CDS             complement(160..600)
                     /locus_tag="VGQ24_03145"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEV8453860.1"
                     /translation="MLSKKAKYAIKALLALADREDEEPMRIVDLASAEQIPPKFLELI
                     LLGLRNQGILQSRKGKGGGYLLARDPADIYLGQIVRMFDGPLAPVPCASQTAYVPCAD
                     CRNEAVCGVHLAMKEVRDATAKVLDGTSLASLRSKVQQVKLLPR"
     gene            complement(708..1589)
                     /gene="cysD"
                     /locus_tag="VGQ24_03150"
     CDS             complement(708..1589)
                     /gene="cysD"
                     /locus_tag="VGQ24_03150"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: protein motif:HMM:NF003587.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009336 - sulfate adenylyltransferase
                     complex (ATP) [Evidence IEA];
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0019419 - sulfate reduction [Evidence IEA];
                     GO_process: GO:0070814 - hydrogen sulfide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HEV8453861.1"
                     /translation="MDHLDQLENRSVHILREAYANFKNLGMLWSIGKDSTVLLWLTRK
                     AFFGHVPIPLIHIDTSYKIPEMIEYRDRLALEWNLTMIYGQNRQALEEKRTFPDGAVD
                     RIACCKALKTDALKHTLSGEWPRYRLNHTKKVYELDRNTEPFTGIIVGVRADEEGSRS
                     KERYFSPRTTQSQWDVGDQPPEFWNQFKTEFAPGTHLRIHPLLDWTELNIWEYIRREA
                     IPTVSLYYNQGNGKRYRSLGCYPCTNAVESDARNVDEIIMELQSGKFVNIAERSGRAQ
                     DKDDGGGLETLRRDGYM"
     gene            complement(1607..2137)
                     /gene="cysC"
                     /locus_tag="VGQ24_03155"
     CDS             complement(1607..2137)
                     /gene="cysC"
                     /locus_tag="VGQ24_03155"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF003013.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004020 - adenylylsulfate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HEV8453862.1"
                     /translation="MSRESRTKAAAPVLWFTGLSGSGKSTIAARVHAELERRGVDVEY
                     IDGDALREVFPNTGFTRAEREEHLRRTGYMASRLAVHGVAVVASLVSPYRESRDFIRK
                     LCREFVEIYVATPLEECERRDVKGLYARARRGELRNFTGIDDPYEPPESPELTLDTRA
                     LSVEQCVAKVLARFEG"
     gene            complement(2191..2952)
                     /gene="cysQ"
                     /locus_tag="VGQ24_03160"
     CDS             complement(2191..2952)
                     /gene="cysQ"
                     /locus_tag="VGQ24_03160"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HEV8453863.1"
                     /translation="MVAPELRSAVTGLAREAGRATMTYYNGAAAAEVREKDDRSPVTV
                     ADEVAHGLLVDGLHRLDPATPVVSEEAEAASFETRRGWRRFWLVDPLDGTKEFIKHRA
                     EFTVNVALIENGEPVLGVVLAPALDLLYWAVKGEGAWREEGARPAERIYSTAPAPGKP
                     LTVVESLSHPSPELEDYLRTIPVARRVKAGSSLKFCWVAEGRADIYPRLGPTMEWDVA
                     AGDCVYRQSGRDGERPSPLTYNKPDLRNTSFVIGL"
     gene            complement(2946..4748)
                     /locus_tag="VGQ24_03165"
     CDS             complement(2946..4748)
                     /locus_tag="VGQ24_03165"
                     /inference="COORDINATES: protein motif:HMM:TIGR02034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEV8453864.1"
                     /translation="MALPEGQQRMNIVIVGHVDHGKSTVIGRLLADTHSLPDGKLEQV
                     RAQCELNSKPFEYAFLLDALKDEQAQGITIDAARVFFKSRLRHYLILDAPGHIEFLKN
                     MITGAARAEAALLVIDAQEGVQENSRRHGYMVSLLGIRQLAVVVNKMDLVGWDRGVYD
                     RIVREYGAFLDQVGIRAACFLPVSARGGDNIAERSPNIPWYQGPTVLDALDAFRSEPA
                     PTERSFRMPVQDVYKFTKQGDDRRIVAGTIESGSVRVGDSVIFYPSGKKSRVKSIEAF
                     NRPVQTRAEAGRSIGFTLQEQIYIPRGEMATLETEPHPQVTTRLRVSLFWLGKESMVK
                     RKEYLLKLGTARVTARVEEILRVMDASTLDATEQRKVIQRHDVAECVLKLDRAIACDL
                     AEDVAATSRFVIVDDFEIRGGGIVREALPDRQTAVRDRVLLRNYKWEPSIIQPEHRAE
                     KYNQKAALILVTGEHEADRKGVAKALESKLFEDGKVVYFLGIGNVLYGVDADIERKQE
                     NRLEHMRRLAEVANLMLDAGIILVVAAAELTQDDLEVIKTAVQPDWIETIWAGDTITT
                     DLACDLHLPGGAVEEAVDRLKAHLQDKGIIFRPW"
     gene            complement(4914..>6864)
                     /locus_tag="VGQ24_03170"
     CDS             complement(4914..>6864)
                     /locus_tag="VGQ24_03170"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453865.1"
                     /translation="YGETLDLGTVRFSVSSAPDLPSASLQPVPRQMAIDWLMSGVQVT
                     PRLGTDVIDIVYYSSDPYLAQRVVNTTLSVFKQLSILTAKQKSQRRREFLESQLKQTD
                     SMLARAQAELAGFRSRQQLASSANALDDQQRAMMAIDARRAELEADRSTFATLMTQLK
                     KGGEAGEGEAIRALAASPAMVDNPRVSDYYRQLNNYQYRLDSMTTGPWRAAPTNPDLI
                     QLKILIGTTKDQLRQAVSSHVSTLDARIAALGNLRARNAASLQVLPAMAEEEARLTGR
                     VQTLTSTSDQVRKDYQNARMAEEVEAGDVDVIDLAGTPYAPVAAAAFVKLALGLVLGL
                     LLGAGGAFLLEALNTSIRRPEDLETALHVPGLAVIPRLTASEPAQRRLGGLLRPGKRA
                     QLESKRPTAASLGTVKQPFSVGVEAFRMLRTSLVWCEQGDDMKTLVVTSAAPGEGKTL
                     TSANLAVTFAYDGLRVLLIDCDVRRPRLHGLFQVPRSPGLMDLLTPSYNGSDGTPSLT
                     FDPSAGRTDSGRPITDVVRSTNVRGLSVLTCGALPTNPSGLLSGVRMRVLLKELAKSF
                     DLVILDTPPVLATADAGILASLADGVLLVVRAGQTDRVAAKRAHQQLVNVGARVVGTV
                     LNDPGGEVSQYGDYYYPYDYAVEQS"
BASE COUNT         1196 a         2194 c         2187 g         1287 t
ORIGIN      
        1 tctccgctcg catacgttta gttgatgccc ccagccgaga ggccgggacc ggttctcacc
       61 ggctgacgcc aaggagctcc tatataccct atccaccaga tagagtaaat aggcaatcag
      121 catgccatcg ggaacctgcg gggtccggta aaaggggttt cagcggggaa gaagcttgac
      181 ctgttggacc ttactacgaa gtgaggcgag gctggtacca tcgaggacct ttgccgtcgc
      241 gtcgcgcacc tccttcattg ccaggtggac cccgcacacc gcctcgttcc ggcagtcggc
      301 gcagggtacg taagcggtct gactggcaca cggaacgggt gcaagaggac catcgaacat
      361 gcggacgatc tggccaaggt agatatcggc agggtcgcgg gccaggagat atcccccacc
      421 cttccctttc cggctctgca ggatgccctg gtttctgagg ccgagcagga tgagctcaag
      481 aaacttcggg ggtatctgct ctgcgctggc gaggtcgacg atgcgcatcg gctcctcgtc
      541 ctcgcggtcg gcgagcgcga ggagtgcttt gatggcgtac ttggctttct tggagagcat
      601 gcgcggattc gggggtggag cgcccgaata tagtcagcta ccgcagcaag tgtactgaat
      661 acactcgggg cgggatcggg gcgtgggccg cggtctccgg caagcgccta catgtatcca
      721 tcgcgccgga gcgtctccag gccaccacca tcatccttgt cctgggcgcg acccgagcgc
      781 tcggcgatgt tgacgaactt gcccgattgc agctccatga tgatctcgtc cacgttgcgg
      841 gcgtcggact ccaccgcgtt ggtgcaggga tagcagccga gggaccggta gcgctttccg
      901 ttaccctgat tgtagtagag cgagacggtc ggaatcgcct cgcgccggat gtactcccag
      961 atattgagct cggtccagtc gagcagcggg tggattcgga gatgggtgcc cggcgcaaac
     1021 tcggtcttga actggttcca gaactccggg ggctgatcgc cgacatccca ctgtgactgc
     1081 gtagtgcgcg gcgagaagta acgctccttg gaacggctgc cctcctcgtc ggcgcgaacg
     1141 cccacgatga ttccggtgaa cggctccgtg ttccggtcca gctcgtacac cttcttggta
     1201 tggttgaggc gataccgcgg ccactcgccg ctcagcgtgt gcttgagcgc atcggtcttc
     1261 agcgccttgc agcaggcgat ccggtccacc gcaccgtcgg gaaaggtccg cttctcctcc
     1321 agcgcctggc ggttctggcc gtagatcatg gtcagattcc actccagagc cagccggtct
     1381 cggtactcga tcatctccgg gatcttgtac gaggtgtcga tgtggatcag cggaataggc
     1441 acgtggccga agaatgcctt gcgcgtcaac cagaggagaa ccgtgctatc ctttccgatc
     1501 gaccagagca tccccaggtt cttgaagttg gcgtacgcct ccctgaggat atgtacgctc
     1561 cggttttcca actggtcgag gtgatccatg ttacctacca tcagagttag ccttcgaacc
     1621 gcgcgagtac tttcgcgaca cactgctcca cgctcagagc gcgggtgtcg agcgtcagct
     1681 ccgggctctc cggcggctcg taagggtcat cgatgcccgt aaagtttcga agctcaccgc
     1741 gccgcgcccg ggcatacagt cccttgacat cccggcgctc acactcctcc aggggcgttg
     1801 ccacgtagat ctcgacgaac tcgcggcaga gcttccggat gaagtcacgc gactcgcggt
     1861 agggcgagac caacgacgcc accacggcca cgccatgcac cgccagccgg cttgccatgt
     1921 acccggtccg gcgaaggtgc tcctcacgct cggctcgggt aaagccggta ttggggaaca
     1981 cctcccgcag ggcgtcccca tcgatgtact cgacgtccac cccgcggcgc tccagctcgg
     2041 cgtgcacccg ggccgctatg gtgctcttac ccgacccgga cagtccagtg aaccataaca
     2101 ccggggctgc tgctttagtt cgagactcgc gagacatagc ctcagccgat ggtgtcggcg
     2161 gcaagagtcg ggccgcttcg ggggtccggc tcacagaccg atgacgaagc tggtgttgcg
     2221 aaggtccggc ttattgtacg tgagcggtga gggccgctca ccatctcgac cggactggcg
     2281 gtagacgcaa tcgcccgcag ccacgtccca ctccatggtc ggacccagac ggggatagat
     2341 gtcggcccgt ccctcggcta cccagcagaa cttgagcgag ctgccggctt tgactcggcg
     2401 agcgaccggt atggtccgga ggtagtcctc cagctccggc gagggatggg agagactctc
     2461 gaccacggtg agcggtttcc ctggcgcggg cgcggtcgaa taaatacgct cggcaggtct
     2521 cgccccttcc tcgcgccagg ctccctcgcc cttcaccgcc cagtagagca ggtcgagtgc
     2581 cggagcgagc actacaccca ataccggctc gccgttctcg atcaatgcta cgttgacggt
     2641 gaattccgcc cgatgcttga tgaactcctt ggtgccatcg aggggatcca ccagccagaa
     2701 gcggcgccat ccgcgacggg tctcgaagga cgcggcctcg gcctcctcgg agaccaccgg
     2761 tgtggccggg tcgagccggt ggagcccgtc aaccaagagc ccatgcgcca cctcgtcggc
     2821 gaccgtgacg gggcttcggt cgtccttctc ccggacttcg gccgccgccg cgccgttgta
     2881 gtaggtcatg gtcgcccgac cggcctcacg ggcgaggccg gtaacggccg accgaagctc
     2941 aggcgctacc atggccggaa gatgattcct ttgtcctgga ggtgtgcctt gaggcggtcc
     3001 actgcctcct ccacggcccc gccggggagg tgaaggtcgc aagccagatc ggtcgtgatg
     3061 gtgtcgccgg cccagatcgt ctcgatccag tcgggctgga ccgcggtctt gatgacctcg
     3121 aggtcgtcct gggtgagctc ggccgccgcg acgaccagga tgatgccggc gtcgagcatg
     3181 aggttggcga cctccgccag gcgccgcatg tgctccagcc ggttctcctg cttccgctcg
     3241 atgtcggcgt ccacgccgta gagcacgttc ccgatgccga ggaagtagac caccttgccg
     3301 tcctcaaaca gcttgctctc gagcgccttg gccacaccct tccgatcggc ctcatgctca
     3361 ccggtcacca ggatcagcgc ggccttctga ttgtatttct ccgcccggtg ctcaggctgg
     3421 atgatgctgg gctcccactt gtaattgcgg agcagcacgc ggtcgcgaac cgcggtttgg
     3481 cgatcgggga gcgcctcccg gacgatgccg ccgccccgga tctcgaagtc atcgacgatg
     3541 acgaatcggc tggtggccgc gacatcctcg gccaagtcgc aggcgatggc ccggtccagc
     3601 ttgaggacgc attcggctac atcgtgccgc tggatgacct tgcgctgctc cgtggcatcg
     3661 agggtcgacg cgtccattac ccggaggatt tcctccaccc gggcagtcac gcgggcggtt
     3721 ccgagtttga gcagatactc tttccgcttc accattgact ctttgccgag ccagaagaga
     3781 ctcacccgca gccttgtggt cacctgggga tggggctcgg tctccagcgt ggccatctcc
     3841 ccgcgcggga tgtagatctg ctcctgcagc gtgaacccga tggaccggcc tgcctcggcc
     3901 cgggtctgca ccggccgatt gaaggcttcg atgctcttca cccggctctt cttgcccgat
     3961 gggtaaaaga ttaccgagtc gcccactcgc accgagcctg attcgatcgt gcccgcaacg
     4021 atgcgccggt catcaccttg cttggtgaac ttgtagacgt cctggaccgg catgcggaac
     4081 gaccgctcag tcggggccgg ctcactccgg aacgcgtcca gcgcgtcgag gaccgtgggt
     4141 ccctggtacc aggggatgtt gggtgaccgt tcggcgatgt tgtctccacc gcgggcggag
     4201 accggtagga agcaggcggc ccggatgccc acctggtcga ggaacgcgcc gtactcgcga
     4261 acaatccgat cgtagacgcc gcggtcccac ccgaccaaat ccatcttgtt caccacgaca
     4321 gccagctggc gaatgccgag gagggagacc atgtagccgt ggcggcggga gttctcctgc
     4381 acaccctcct gcgcatcgat caccagcagg gccgcctctg cgcgggcggc gccggtgatc
     4441 atgtttttca ggaactcgat gtggccgggg gcgtcgagga tgaggtagtg ccgcagccgg
     4501 ctcttgaaga acacccgggc ggcgtcaatg gtaatgccct gcgcctgctc gtccttgagc
     4561 gcgtcgagca gaaacgcata ctcgaacggc ttggagttga gctcgcactg agcccgcacc
     4621 tgctccagct tcccatcggg aagggagtga gtgtcggcca ggagacgacc gatgacggta
     4681 ctcttgccgt gatcgacgtg gcccacgatc acaatgttca tccgctgctg cccctcgggc
     4741 agggccacgg aggctcgcaa aggcgcgacc tgggatgaaa tgccggtcag acttgcctcc
     4801 ctgttgaact gcggcacgtc atattgtggt gaacgcaaaa cagcgaggca ggtgccccgc
     4861 cgtttcgtgt accgtctctc agctcagcca gtcgcatcaa tctgcggatg tcttcagctc
     4921 tgctccaccg cgtaatcata ggggtagtag tagtccccat attgtgagac ctcaccaccg
     4981 ggatcgttga gcactgtccc aaccactcgt gccccaacgt tgaccagctg ttggtgggct
     5041 cgtttcgcgg ccacccggtc ggtctggccg gcacggacca ccaggagaac gccatctgcg
     5101 agcgaggcca ggatcccggc gtccgccgtc gcgagtactg gcggtgtgtc caggatgacc
     5161 aggtcaaagc tcttcgcgag ctccttcagc aacacccgca tccgcacccc actcagaagc
     5221 cccgaaggat tggtcgggag ggccccgcag gtgagaaccg acaaccctct cacgttcgtg
     5281 gaccggacca cgtcggtgat ggggcggccc gaatcggtgc ggcccgcgct gggatcgaag
     5341 gtgagcgacg gagtgccgtc ggacccgttg taggaagggg tcagcaaatc catcaggccg
     5401 ggtgaccgtg gcacctggaa cagcccatgc aggcgcgggc ggcggacatc gcaatcgatc
     5461 aagaggactc ggagcccgtc gtacgcaaag gtcacggcca ggttagccga cgtcagcgtc
     5521 ttgccttcgc ctggggcggc gctggtaacg accagggttt tcatgtcatc gccctgctcg
     5581 caccacacga ggctggtccg cagcattcga aatgcttcaa ccccaaccga gaacggctgc
     5641 ttaaccgtgc ccaaggatgc ggcagtgggg cgcttcgatt ccagttgggc tcttttccct
     5701 ggacgaagca aaccgccgag ccgccgctga gcgggctcgc tggcagtcag gcgcgggatg
     5761 acggctagtc ctggcacgtg cagagccgtt tcgaggtcct caggtctccg aatcgacgta
     5821 ttcagtgcct cgaggagaaa ggcgccgccg gcaccgagca gaagaccaag gacgagcccg
     5881 agcgcgagct tgacgaaggc agcggccgcg accggcgcgt atggcgtgcc ggccagatcg
     5941 atgacgtcga cgtcaccggc ttcgacctcc tccgccatcc gtgcgttctg gtaatctttg
     6001 cggacctggt cgctggtgga ggtcagggtt tggacccggc cggtcagccg cgcctcctcc
     6061 tcggccatgg caggcaaaac ctgaagggac gccgcatttc gggcccggag gttgcctagt
     6121 gccgcgattc gcgcgtccag ggtggagaca tggctgctga cagcctgacg cagctggtcc
     6181 ttggtggtac cgatgaggat cttgagctgg atcaggtccg ggttggtcgg cgccgctctc
     6241 cagggtccgg tggtcatcga gtccaaccgg tactgatagt tattgagctg ccggtaatag
     6301 tcgctaaccc gagggttgtc caccatggca ggcgatgctg ccagggcacg gattgcttca
     6361 ccctctccgg cttcgccgcc ctttttaagc tgagtcatca gcgtcgcgaa ggtggatcga
     6421 tcggcctcga gctcggcccg tctggcgtcg atggccatca tcgcccgttg ctgatcgtct
     6481 agcgcgttcg cagagctggc tagctgctgc cggctacgga acccagccag ctccgcctgg
     6541 gcgcgagcga gcatactgtc ggtctgcttc agctggctct ccagaaactc ccgccggcgc
     6601 tgagacttct gcttggccgt cagaatgctg agttgcttga acacagatag cgtcgtattg
     6661 accactcgtt gcgccaggta cggatcggag gagtagtaga cgatatcgat gacgtcagtg
     6721 ccgagccgcg gagtaacctg gacaccgctc atcagccagt cgatggccat ctgccgggga
     6781 accggctgga ggctggcgct gggcaggtca ggcgccgagg agacggaaaa ccggaccgta
     6841 ccgaggtcca acgtctcccc atag
//
LOCUS       DASYRV010000127         1839 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3762418, whole genome shotgun sequence.
ACCESSION   DASYRV010000127 DASYRV010000000
VERSION     DASYRV010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1839
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3762418"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..935)
                     /locus_tag="VGQ24_03175"
     CDS             complement(<1..935)
                     /locus_tag="VGQ24_03175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453866.1"
                     /translation="MVVATDRRLYVSTDKGLFQARSNGKGYEAQLLAFDRYAPMRWPV
                     VVDCDNPHRLYAGTSKGGMFRSDDAAQSWREINQGIIYKEIWSLIQHPRTGELYVGTG
                     PASVFKSLDRGESWIDSEQFRTMPESIDWTFPPAPHIAHVKGLAVCVNDPQVVFGALE
                     EGWLVRSRDGGATWETLKNGTEFDSHYVAIMPDNPAVILATSGDGFYRSTDGGDSFVR
                     CTEGLDRSYFAQPVVHPARPNVVFTAASAVPPPGWRRPEGADAGFYRSEDQGLTWRRL
                     AGGLPDHITAAPRSTAGDPESPDVFIVGMTDGTVW"
     gene            complement(961..1377)
                     /locus_tag="VGQ24_03180"
     CDS             complement(961..1377)
                     /locus_tag="VGQ24_03180"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEV8453867.1"
                     /translation="MFKINAMDHIVLNVPDINRSLAFYMDVLRLAPERLDQFRRGEVR
                     FPSVRISQDTVIDLFPMKPGEALGGGAGLQNLNHFTMVVEAADFEAFQKHLTEHGVTI
                     EDGPGRRWGARGYGQSVYFRDPDGNRIEVRCYPSNA"
BASE COUNT          332 a          604 c          549 g          354 t
ORIGIN      
        1 atccagaccg tgccatcggt catgcccacg atgaacacgt ccggactctc agggtcgccg
       61 gcggtggatc gcggagcggc cgtgatatgg tccggcagcc cgccggccag ccgccgccag
      121 gttaatccct ggtcctccga gcggtagaag cccgcgtcgg caccctcggg tctccgccaa
      181 cctggcggcg gtaccgccga ggccgcggtg aataccacgt tgggtcgagc ggggtggacg
      241 accggctggg caaagtagct ccgatccaga ccctcggtgc agcgcacgaa tgaatccccg
      301 ccgtccgtgc tgcgataaaa gccgtctccg gatgtcgcca ggatgaccgc cgggttgtcc
      361 ggcatgatgg cgacgtaatg ggagtcgaac tcggtgccat tcttgagtgt ctcccaggtc
      421 gcgccgccgt cgcggctgcg cactagccac ccttcctcca acgccccgaa gacgacctga
      481 ggatcattca cgcataccgc gagacccttc acatgagcga tgtgcggagc cggcggaaat
      541 gtccagtcga tcgactcagg catcgtccgg aactgctcgg agtcaatcca gctctcaccc
      601 cggtccaggc tcttgaacac cgaggctggc ccggtgccaa cgtatagctc gccggtacgg
      661 ggatgctgga tcagggacca gatctccttg tagatgatgc cctggttgat ctcccgccag
      721 ctctgggcgg cgtcatcgct gcggaacatt ccgcccttgc tcgtgccggc gtacaagcgg
      781 tgtgggttat cacaatccac gaccaccggc cagcgcatgg gtgcgtagcg atcgaaggca
      841 agcagctgcg cttcgtagcc tttcccattc gagcgtgcct gaaacagccc cttgtccgtg
      901 ctgacgtaca gccgccggtc cgtggctacg accatggtgt cactccttac cgcctcatca
      961 tcacgcgttc gatggatagc accgaacctc gatgcgattc ccgtcgggat ccctgaaata
     1021 gaccgactgc ccatatccac gggcgcccca tcgccgaccc ggcccgtcct cgatcgtcac
     1081 gccgtgctcg gtgagatgct tctgaaacgc ctcgaagtcg gccgcctcca caaccatggt
     1141 gaaatggttc aagttttgga ggcctgcacc acctcctagc gcttcccctg gcttcatagg
     1201 aaagaggtcg atcacggtgt cctggctgat acgcacggag ggaaatcgga cctctccccg
     1261 ccggaattgg tcgagccgct ccggcgcaag gcgcaagacg tccatgtaaa aggccagcga
     1321 gcggttgatg tccggtacgt tgagcacgat gtggtccatg gcattgattt tgaacatagc
     1381 tttcgtcctc cctcacaacc cttctgcagc cagttggccc gatgcacgac ccgggtggag
     1441 accgtcttca tcccgacgtt tcctcgaggt gagcgtctcg attcttatca cgatcacgct
     1501 cttgcaaccg ggttcagatc catcgctcac ctcggtcgtg tttcgacgtc agcttccacg
     1561 cgcccgggat tcgagagccg gccctgggtg gacgttctgg acgccgccgg ggccgagttt
     1621 acgacaagat aatggtcaag gatctggccg ctacatcggg cgtacctggg cacagtgcca
     1681 tcgccagtcg ccgacgtgac cagacagcgc tgactcgact ctctgaggtg cgacgatatt
     1741 ggatcggcgc gagatccttc ccgtggagct ggcgaaaccc gatctcctcg gtagcctcgc
     1801 tcgcggcgta caggctgacc gggatgttga cgaggccga
//
LOCUS       DASYRV010000128         3220 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_880389, whole genome shotgun sequence.
ACCESSION   DASYRV010000128 DASYRV010000000
VERSION     DASYRV010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3220
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_880389"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1119)
                     /locus_tag="VGQ24_03185"
     CDS             complement(<1..1119)
                     /locus_tag="VGQ24_03185"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453868.1"
                     /translation="MPTYPETRSQDLLEVLHGEAIADPYRWLEDGEAPETRLWTARQN
                     ELTESYLAAVPAREQIRRRLGELLSIGVLSTPNPVRGRYFYLRREGRQNHPVLYWRHG
                     LDGADRVAVDPNGLNEAGTTALDWYYPSEDGRLLAYGLSENGSEESVLHLLDLESGRH
                     LSDRIPRMRSAALAWLPDGSAFYYSRYPAADEVPAGEEHYHRAIYYHRLGANPADDPL
                     VYRPAQKEYWPGVSLSPDGRWLLIEVARTFDQTDLYVRDLASGGPLVPVAENLPASFE
                     GEVAHGRLFIRTNLDAPTYRLYAVDPEHPEREAWREIVEPRADAVLEGTTVAGHRLAL
                     TYLERASSRLRVTDLEGRMVQEVPLPALGSLFGVDAEWD"
     gene            1286..1648
                     /locus_tag="VGQ24_03190"
     CDS             1286..1648
                     /locus_tag="VGQ24_03190"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HEV8453869.1"
                     /translation="MRDHTSLRAWQEARKISIEVIRLAHSSWKPYAAALFSQLQRASL
                     SIQLNIAEGYTYGDSPTFTKHLGIAYGSAVETGELLRLALDAEIIGQGPLAALLERTQ
                     ETERILLGMLKRRRRFKA"
     gene            complement(1704..2783)
                     /locus_tag="VGQ24_03195"
     CDS             complement(1704..2783)
                     /locus_tag="VGQ24_03195"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: protein motif:HMM:NF002872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006002 - fructose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent 6-phosphofructokinase"
                     /protein_id="HEV8453870.1"
                     /translation="MRIAISTGGGDAPGLNAVIRAVVLSAHHRGWQCYGIQRGYEGLL
                     TFNGVVPLGPAQVRGITHLGGTILGTTNRGNPFHYAMRDPEGNTLEVDRSEDLVAAFQ
                     ASGFDALVSIGGDGSLLISYELWKKGLPVVCVPKTIDNDVSGTQRSFGFDTAVSTATE
                     AIDRLHSTAESHDRVMVVELMGRYAGWIALYSGLSGSADVILLPEIPFDMQKVCAKIR
                     SREAAGRHFSIVVVAEGARSKDGAVELVERRGVGTADRLGGIASKVARAIEHYTGKET
                     RTLVLGHLQRGGSPTTYDRLLALRFGAAAVRAIADRAFGVMVGLKGQGIEQVPLEEVV
                     GRPKNVPLDSDTIATARELGISLGD"
     gene            complement(2787..3017)
                     /locus_tag="VGQ24_03200"
     CDS             complement(2787..3017)
                     /locus_tag="VGQ24_03200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_255349558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(2991..2993),aa:Sec)
                     /transl_table=11
                     /product="SelT/SelW/SelH family (seleno)protein"
                     /protein_id="HEV8453871.1"
                     /translation="MTIQYCVVUNYKPRAASLAAELKQALPDAEIRLLESSGGLFEVT
                     VDGTLVFSKKATRRHAQPGEVLQAIQQVRGEK"
     gene            complement(2991..>3220)
                     /locus_tag="VGQ24_03205"
     CDS             complement(2991..>3220)
                     /locus_tag="VGQ24_03205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453872.1"
                     /translation="SAQEPQPPGQSPGGESVGQHGSDRYGTREGLTRIAITSTGPLGI
                     FSHRHYDSRRCAPNTQALVTIMHVTIQYCVV"
BASE COUNT          607 a         1010 c         1003 g          600 t
ORIGIN      
        1 atcccattcg gcatccactc cgaagagact tcccaatgca ggcagcggga cttcctgtac
       61 catccgaccc tcgagatcgg taacgcgcag tcgcgacgac gcccgctcca ggtaagtcaa
      121 cgcgagccga tgtccggcaa cggtagtgcc ttcaagcacc gcatccgctc gtggctccac
      181 aatctcccgc cacgcttcac gttcagggtg ttcagggtcc actgcgtaca agcggtaggt
      241 cggcgcgtcg agattggtgc gaatgaagag ccgtccgtgg gccacctccc cctcgaacga
      301 ggcgggcaga ttctccgcta ctggtaccag cgggccaccc gaggcgagat cccgaacgta
      361 gagatcggtc tgatcgaagg tccgggcgac ctcgatgagg agccagcggc cgtcgggcga
      421 gaggctcacc ccgggccagt attccttttg cgccggccga tacaccagcg ggtcgtcggc
      481 aggattggct cccagacgat ggtagtagat cgcgcggtgg tagtgctcct cgcccgcggg
      541 tacctcgtcc gctgcgggat agcggctgta atagaaggcg cttccatccg gcagccaggc
      601 cagggccgca gagcgcatac gggggatccg gtcggagagg tgccggccgc tttccaggtc
      661 gagcaggtgg agcacactct cctcgctgcc attctctgac aggccgtaag ccaggagccg
      721 gccatcttcg ctcgggtaat accagtcgag agcggtcgtg cctgcctcgt tcaaaccgtt
      781 cgggtccacc gcaacgcgat cggcaccgtc gagcccatgc cgccaataga gcaccgggtg
      841 gttctgccgc ccctcacgcc gcagatagaa gtaacggcct cgtacgggat tcggcgtgct
      901 gaggactcca atcgacagca gctccccgag ccggcgacgg atctgctccc gggcaggcac
      961 agccgccagg tacgactcgg tgagctcgtt ctggcgggcg gtccagagcc tggtttcggg
     1021 cgcttccccg tcctccagcc agcggtaggg gtcggcgatg gcctcaccgt gcaggacttc
     1081 taggaggtcc tgggatcgag tttctggata ggtgggcatg acaaaagcgt aaacagtgaa
     1141 cagtgaacag tgaacagtga acagggcaac aacgtgaaca gtaaacagtg aacggtgaac
     1201 agggacggac caggcgaatc aaataatggt actcgcagcg tatttctgag tggttgaaag
     1261 aaggttgcta ccgtagagtg gcagagtgcg tgatcatact tccctgcgcg cctggcagga
     1321 ggcccgtaaa atctctatag aggtgattcg gcttgcccat tcatcgtgga agccttacgc
     1381 ggccgcactc tttagtcagc tccaaagagc ctcactgagc atccagctga acatcgccga
     1441 aggctacacc tatggcgatt cacctacatt tacgaagcat ttggggattg cctatgggtc
     1501 agcggtggaa accggagaat tgctgcgcct ggccctggac gccgaaatca ttgggcaagg
     1561 acctctcgcg gccctccttg aacggacaca ggaaaccgag cgcatcctcc tgggtatgct
     1621 caagcgccgc cgaaggttca aggcctaggc tgttcactgt tcactgttca ctctttactg
     1681 ttcactgttc actgttcatt gctttagtcc ccaagactta ttcccagctc ccgcgccgtc
     1741 gcgatcgtgt ccgaatcgag cgggacgttt ttcgggcggc cgacgacctc ttccagcggt
     1801 acctgttcga tgccctgtcc cttgagtccg accatgacgc cgaaggcacg gtcggcgatc
     1861 gctcgcacgg ccgcagcgcc gaaccggagc gcgagcaggc ggtcgtacgt agtgggcgag
     1921 cccccccgtt ggagatggcc caggacgagg gtacgcgtct ctttcccggt gtaatgctcg
     1981 atggcgcggg ccactttgct ggcgatcccg cccaatcggt ccgccgtgcc gacgccgcgt
     2041 cgctcgacca actcgacggc gccgtcctta gaccgcgctc cttccgccac caccacgatg
     2101 ctgaagtgcc ggcccgctgc ctcgcggctc cggatcttgg cgcagacctt ctgcatgtcg
     2161 aaaggaatct cgggcaggag gatgacatcg gcgctgccgg agagtccgct ataaagcgcg
     2221 atccatcccg cgtagcggcc catgagctcg accaccatga cccggtcgtg actctccgcg
     2281 gtcgaatgca ggcgatcgat cgcctcggtg gcggtgctga cggcagtatc gaagccgaag
     2341 gagcgctggg tcccgctcac atcattatcg atcgtcttgg ggacacaaac gaccggtaga
     2401 cctttcttcc acaactcgta ggagatcagc agactcccgt cgccgccaat cgacaccagc
     2461 gcgtcgaagc cgctggcctg gaatgcggca accaggtctt ccgaacggtc gacctcgagc
     2521 gtattcccct cggggtcacg catagcatag tgaaagggat tcccgcggtt ggtggtgccc
     2581 agaatggtcc cgccgaggtg ggtaatgccc cgcacctgcg ccgggcccag tggcacgaca
     2641 ccattgaagg tgagcaagcc ctcgtagccg cgctgaatcc cgtagcactg ccatccgcgg
     2701 tgatgcgcgg aaagcaccac cgcgcggatg acggcgttca gtccaggggc gtcaccgccg
     2761 ccggtggaga tggcgatgcg catgggtcac ttttcacctc tcacctgctg gatggcctgg
     2821 aggacttcgc cgggttgggc gtggcgtcgt gtcgctttct tggagaacac cagcgtaccg
     2881 tcgacggtca cctcgaagag tccgcccgaa gattcgagca gtcggatctc ggcatccgga
     2941 agggcctgct tgagctcagc cgccagactg gcggctcgtg gcttgtagtt tcagacgacg
     3001 cagtactgga tcgtcacatg catgatcgtc accaaggcct gcgtgttcgg agcacaacgc
     3061 cgcgaatcgt agtggcggtg ggagaagatg ccaaggggac cggtggatgt gatggcgatc
     3121 cttgtcagcc cttccctggt accgtatcta tctgagccat gctgacctac cgattccccg
     3181 ccaggggact ggcccggggg ctgaggctcc tgggcgctct
//
LOCUS       DASYRV010000129         8092 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2726437, whole genome shotgun sequence.
ACCESSION   DASYRV010000129 DASYRV010000000
VERSION     DASYRV010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8092
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2726437"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..403)
                     /locus_tag="VGQ24_03210"
     CDS             complement(<1..403)
                     /locus_tag="VGQ24_03210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453873.1"
                     /translation="MIRFAWLLLGSLVWAGPVNAQTVMRAEPPLDSARAAVRDALLIL
                     RDSLNTIDGAAARLQRDFRQASGPSLLSRARVMRDACARSVRTVPATRRAVLDAKLLE
                     PQRVKHRRKLVGAMDHLSGALARCQQDFAAMS"
     gene            complement(400..1011)
                     /locus_tag="VGQ24_03215"
     CDS             complement(400..1011)
                     /locus_tag="VGQ24_03215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453874.1"
                     /translation="MATPQTLVVRTFTDRAEGLSHFLLRAGEAPRLVAFDDALGCPVE
                     TALAALEWTGAVGILQDDDLLHAARLTSETAAAVIERKGQDGRRYVYLGPRLDAPPMD
                     VFEGAILFDEPGVKAVEFTQRAHGLAHFLRATAGAGALLALLGRRAPEVRHLRRWLGP
                     IIQELDLPRPLVAGWFAAGSAGCLFSSPEGEPTYRYIEVGMES"
     gene            complement(1137..3128)
                     /locus_tag="VGQ24_03220"
     CDS             complement(1137..3128)
                     /locus_tag="VGQ24_03220"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEV8453875.1"
                     /translation="MYYVLWTLAALQQQPTASVPASPGLATVRVEPGEVAVQVGDTVR
                     LMATAEDSAGRPVRDVVVRWFQSGGRFEGKVDSTGLVTGGSTGTLTVSALASPRGGGR
                     PVTGFARVTVLPQPATRLELDRAITRLYAGQSLALAAIAHAANNDRRYDQVVWSSDAP
                     GIVAVSPTGRLSAGRPGRARITARAGNASRSFGITVAPNPVTTLRLDPASASVRTGEV
                     VRFAFQALNRAGRPVGDAAPEWSLNPGNAQIDADGFFVADVPGSYRVTASFAGQVVEA
                     SIDVRPRDVRRPATLVGRLPLLRFRAAEFWLHPDGRHGYLSTIGDRVYAIDVSNPAAP
                     VITDSVVVDARGINDVMTTEDGKFGVLTREGASTRKNGIVILSFEDPAHPKPIAEFTE
                     TVTGGVHSTFIYRGYVYLTDDATGSLRVIDIRDPYKPRQVARWQTRPDEAGNFLHDID
                     VKDGLAYLSYWNEGLVILDVGKGIKGGSPENPRLVSQYKYDLNSLYRDVEAVGGPGFI
                     RGTHTAWRAAKYVFVGDEVFSATPRSTEGGGVVGLGRAYGRLHVVDVSDLERPREVAY
                     YEPKDGGSHNVWVAGDTLYLGDYQGGLRVLDISGELRGDLLRQGREVAHVVTGDSTGV
                     VPNAPNAWGAIYRNGLIYVPDINSGLWIVKVEPKSELVP"
     gene            3239..3760
                     /locus_tag="VGQ24_03225"
     CDS             3239..3760
                     /locus_tag="VGQ24_03225"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: protein motif:HMM:TIGR00589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEV8453876.1"
                     /translation="MRVEWTSYSSPIGALTVVECEAGPLVIEFPNRAVTIKWAVRLRA
                     AVPELHISQGSCRTTTAWLDEYFAGSPRPVAYPDYLKRWFDLSPAQAAVFKALRKIPL
                     GETRSYDDIARATKLHPRQIGWLVSANHLAILIPCHRVVGKDGGLVGYGGGIAKKRWL
                     LDHELRAAGVVLR"
     gene            4039..4239
                     /locus_tag="VGQ24_03230"
     CDS             4039..4239
                     /locus_tag="VGQ24_03230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002633565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEV8453877.1"
                     /translation="MAKGTVKWFNDAKGFGFIAQDGGKDVFVHHTAIIADGFRSLSEG
                     DNVEFEVVEGPKGLQASNVRKV"
     gene            4379..4954
                     /locus_tag="VGQ24_03235"
     CDS             4379..4954
                     /locus_tag="VGQ24_03235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453878.1"
                     /translation="MLIPGRVLALASLLLLLVAGPATVALAQPDTTALELQGFRAGAR
                     LDELSAQLQRMGGGPLRCRRSRVDRRVMDCRAALREPEVGGVVELWVSAMDSAAGVIT
                     LSGMVVPEQLDRWRQALQGRYGRVGPRVQGTQWMLQWVRRGRMLRLTWRLEGLGKVAS
                     VSLVDGRVLDDWGRVRPSPAARPREAGAISS"
     gene            complement(4944..5228)
                     /locus_tag="VGQ24_03240"
     CDS             complement(4944..5228)
                     /locus_tag="VGQ24_03240"
                     /inference="COORDINATES: protein motif:HMM:NF013844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEV8453879.1"
                     /translation="MRDWTDRTADATFDLHGQTVLEAAANAERFLRAQAKARPGAVVR
                     LITGRGRGGTGAPIRTRVRGLLRTLKASGAVVRDYTLEETEGSYLVRLTS"
     gene            5281..6462
                     /locus_tag="VGQ24_03245"
     CDS             5281..6462
                     /locus_tag="VGQ24_03245"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEV8453880.1"
                     /translation="MHLSEAVALHSRPIGSRSTRWARLPSLLFTWLTLLFSACNYSGD
                     PIRIGLAGSLSDPVGRPMKRAAELAVEQINAQGGIQGRPLELLERDDYADPDSAVFVA
                     TDLYEAGVSAVIGHLFSSTTLAAAPVYNGGSAPVAAISPSSSSPDVTTAGDYTFRICP
                     SDLAHGVALARWVHDTLRLERGAMLYLNDQYGRGVRQMFVREFTRRGGILLAIDPYLG
                     DIPDVGPYLDRLEKIGGVEFLVVAGNRGEGEEILRQARQRGLRMPVLGGDGLEGIEEA
                     GAIADGVYLSSAYLPTIASPANRAFLQAYHKKFPTAGLPNQPAAATYDAVYLLRDVIT
                     RAGPERAAVRRELARVGTGAPAFQGVTGTVAFDARGDVPNQAVYIGMVHDGAVRLAGG
                     Q"
     gene            6462..>8092
                     /locus_tag="VGQ24_03250"
     CDS             6462..>8092
                     /locus_tag="VGQ24_03250"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098561 - methyl accepting chemotaxis
                     protein complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEV8453881.1"
                     /translation="MLSSLRSRVLSGMVLLIALVFAIALIGVRTIQSLDRSVDQELSL
                     LLESTDLSNGLIASLSSEVRSAEQYLVHPAETFRRRFIDDGDSAYVYQRRYRTLKALT
                     TSDRYIVNKIASNQADLEVTYATAHALTDLGRLDEARRLADHARAPADTLLGDVRALA
                     LAQNNRSLARANELRQEAGHRRTLLWVLFLASLGIGIGASLWTVRSVDGPLGRLVAAA
                     DRFGAGDLRRVQLNKMPTELDQLARAMDGMAGRLRGVVVSVVKEASQIGNSASDFSAM
                     SQELAASSGEISTAMVKIASSAEQQVRGMEKADALLLNLRQIAETNATASARMVELGD
                     RIRELAARHKGDVEAAGQTLLAIREVVGTSARQVQELSRLSEPITDFIDLIRQISSQT
                     NLLALNAAIEAARAGEHGRGFAVVAEEVRRLADSSSTAAEEVAKTVQFIRNQVRDVSE
                     TMDVGSAKVHGIEAVAMAAARALEDIAAAVQEVHTAASEVVREAEANRQIVGQLGERT
                     QEVSQAATEHASASEQVTAAAEEQTASTEEMAAAAG"
BASE COUNT         1382 a         2646 c         2711 g         1353 t
ORIGIN      
        1 ggctcatggc ggcaaagtcc tgctggcacc gagccagagc gccgctcagg tggtccatcg
       61 cgcccaccag cttcctccgg tgtttcactc gctgtggctc cagaagtttc gcgtccagca
      121 ccgcccttcg cgtcgcaggt accgtgcgga cggatcgggc acacgcgtcc cgcatgaccc
      181 gcgcgcgtga cagcagggag gggcccgatg cctggcggaa atctcgctgc agccgggcgg
      241 ccgccccatc gatggtgttc agtgaatccc gcaggatcag gagtgcgtca cgcaccgcgg
      301 cacgggccga gtcgagcgga ggctccgctc gcatgaccgt ctgggcgttc accggaccgg
      361 cccagaccag gcttcccagc agcaaccagg cgaaccggat cacgactcca tccccacttc
      421 gatgtagcgg tacgtcggct cgccttcggg cgacgagaac agacagcccg cggaacccgc
      481 tgcaaaccag ccggccacca acgggcgcgg aagatcgagc tcttgaatga tgggtccgag
      541 ccagcgtcgc agatgccgca cttccggcgc gcggcgcccg agcagagcca ggagtgcgcc
      601 ggcgccagcg gtagcgcgaa ggaagtgcgc cagcccatgg gcccgctggg tgaactcgac
      661 tgccttgacc ccgggctcgt cgaacaggat cgcgccctcg aagacatcca tcggcggtgc
      721 gtcgagccgg gggcccagat acacgtagcg ccgtccgtcc tggcctttgc gttcgatcac
      781 cgcagccgct gtttcactcg tgagccgggc ggcgtgcagg agatcatcat cctggaggat
      841 gccgaccgcg ccagtccact ccagcgccgc aagggcggtt tccaccgggc agccgagggc
      901 atcgtcgaag gcaaccaaac ggggagcttc accggcccgg agcagaaagt gggagagccc
      961 ttccgcacga tcggtgaacg tgcggacgac gagtgtttgg ggagtggcca tatcgaagaa
     1021 tatagcgggg cagcggggca gcagggcagc agggcagtca ctgagatgca gagaactggg
     1081 tcacagtagt gactgtttac ccgcggctct gccccgccgc cccgccgccc cgcctcctac
     1141 ggcaccagct ctgacttggg ctccaccttc acgatccaga ggccggagtt gatgtcgggc
     1201 acatagatca ggccgttgcg gtagatcgcg ccccaggcat tgggggcgtt gggtacgacg
     1261 ccggtgctgt cgccggtcac cacgtgggcg acttcacggc cttgccggag aaggtcgccg
     1321 cggagctcac ccgagatgtc gaggacgcgg agcccgccct ggtaatcgcc cagatacagc
     1381 gtgtcacccg caacccatac gttgtggctc cctccgtctt tgggctcgta atacgccacc
     1441 tcccggggcc gctcgaggtc cgacacatcg accacatgaa gacggccgta cgcgcggccc
     1501 agaccgacca ctccgccgcc ctcggtggac cgcggcgtgg ccgaaaagac ctcatcgccc
     1561 acgaacacgt acttggccgc acgccaggcg gtatgggtgc cgcgaatgaa tcccggtcca
     1621 cctacggcct cgacatcccg gtagagcgag ttcaggtcgt atttgtactg agacacgagc
     1681 cggggattct ccgggctgcc gcctttaatc cccttcccca catcgaggat gaccaggccc
     1741 tcattccagt agctcaggta ggccaggcca tccttcacat cgatgtcgtg aaggaagttt
     1801 ccggcctcgt ccggccgggt ctgccagcgt gctacctgac gcggcttgta cggatcccgg
     1861 atgtcgatca cccggagcga tccggtcgcg tcatcggtca aatacacata tccccgatag
     1921 atgaacgtgc tgtgcacgcc gccggtaacc gtttcggtga actccgcgat cggcttggga
     1981 tgagcgggat cttcgaagga gaggatgacg atgccgttct tccgggtcga ggcaccttcc
     2041 cgggtgagca cgccgaattt gccgtcctcc gtggtcatga cgtcgttgat cccgcgcgcg
     2101 tccaccacca cggaatcggt gatcaccggc gccgcgggat tactcacgtc gatggcatag
     2161 acccggtcgc cgatcgtgct gagatagccg tggcgcccgt ccgggtggag ccagaactcc
     2221 gcagcccgga agcgaagcag cggtagccgt cccaccagcg ttgccggccg gcgcacgtcg
     2281 cgcggccgaa cgtcgatgct ggcctcgacc acctgccccg cgaagctggc cgtgacgcga
     2341 tagctccccg ggacatccgc gacgaagaat ccatcggcgt cgatctgtgc gttgcccggg
     2401 ttgaggctcc actcgggagc ggcatcgcca accgggcgcc cggcgcggtt gagggcctgg
     2461 aaggcaaacc ggaccacctc gccggtacgg accgaagcgg acgcagggtc gagcctcagc
     2521 gttgtgaccg gattcggggc tacggtgatt ccaaacgagc ggctggcatt cccagcacgt
     2581 gctgtgatcc tggcccgccc gggacggccc gcgctcagtc ttccggtggg gcttaccgcg
     2641 acgatccccg gtgcgtcaga gctccaaacg acctgatcgt aacggcggtc attgttggcg
     2701 gcgtgggcga tggcggccag cgcaagcgat tgccccgcgt agagccgggt gatagcacga
     2761 tccagttcca ggcgcgtcgc cggctggggg agcacagtga cccgggcaaa gccggtgacg
     2821 ggacgccccc caccacgcgg gctcgccaag gcgctgacag tgagggtccc agtcgaaccg
     2881 ccggtaacca gcccggtcga gtcaaccttc ccttcgaagc gaccaccgga ctggaaccac
     2941 cgcacgacca cgtccctcac gggtcggccg gccgagtctt ccgccgtagc catgagtcga
     3001 accgtgtcgc ccacctggac ggcgacttcg ccgggttcga ccctgacagt tgcgaggccc
     3061 ggggaggccg gcacggaggc ggtgggttgc tgctggagag ccgccagcgt ccacaggacg
     3121 tagtacatcg agtcctcggg gggaacaggt tctcgggggg agatctggtc gcgggaatgt
     3181 acacgatgcg gtgggggcgg ggaacggcta atttagacct tcccgtcctg gagcactcat
     3241 gcgggtggaa tggacatcgt acagctcgcc cataggcgct ctgacggtcg tggagtgcga
     3301 agccggcccg ctcgtgatcg agtttcccaa tcgcgccgtc accatcaagt gggccgtgcg
     3361 tctgcgggcc gctgtacccg agctgcacat atctcaaggc agctgccgaa ccaccacggc
     3421 ctggctcgat gagtacttcg cgggttcacc tcggcctgtt gcctaccccg actacctgaa
     3481 gcgctggttc gacctttcac cggctcaggc ggcagtcttc aaggcccttc gcaagatccc
     3541 cctgggagag actcgctcct acgacgacat cgctcgtgcg accaagcttc acccgagaca
     3601 gatcggctgg ctggtgtcgg ccaaccatct cgccatcctg atcccatgcc accgggtggt
     3661 ggggaaggat ggtggcctgg tcggatacgg cggggggatc gctaagaagc gctggctgct
     3721 ggatcatgag ctgcgggcgg cgggggtggt gctgaggtag atggacgggc ggacaggcgg
     3781 acaggcggtc gggaccgaaa ttagctcacg actgaccgcc cgaccgactg tccatccgtc
     3841 cgcctgctta ttgacaaaac cgtttccaag catgacctta tgaaatgcaa gacgcggtgc
     3901 cttcctttta tttttgaaga ggtttggccg atcggacaat ttgtccgggc ggcttttttt
     3961 tggggctttt gttaacccgg ccaatccggc tgggggttcc cccggagccc tagggctccc
     4021 tttcaagagg ttgcagcaat ggcgaagggc acggtcaagt ggttcaatga cgcaaagggg
     4081 ttcggtttca tcgcgcagga cggtggtaag gacgtgttcg tgcatcacac ggctatcata
     4141 gccgacggct ttcgctcgct gtccgaagga gacaacgtcg agttcgaggt cgtcgaaggc
     4201 ccgaaaggcc tccaggcctc gaacgtccgt aaggtctgac accccagcgc ccttcccgtt
     4261 aggtcctcga atcagcctag acccccgctg ccagccggcg ggggcctagg tgtctccagt
     4321 tcccaccaaa ccagccgata atccagaccg tcccatctga tcgaggtcgt gctgcagcat
     4381 gctcataccg ggccgtgtgc tcgcgcttgc cagcctcttg ttgctgctcg tcgcgggccc
     4441 cgcgacggtc gccttggcgc agcccgacac caccgcgctc gagttacagg ggtttcgagc
     4501 cggcgccagg ctggatgagc tgagcgcgca actgcagcgc atgggtggcg gtccgttgcg
     4561 atgccgccgg tccagagttg atcgccgggt catggattgc cgagccgcgc tgcgcgagcc
     4621 cgaggttggc ggtgtggtgg agctgtgggt ctctgccatg gacagcgccg ccggcgttat
     4681 cacgctttcc ggcatggtgg tgccggagca gctcgaccgc tggcggcagg cgctacaggg
     4741 gcgatacggg cgagtgggac cgagagtaca gggtacccag tggatgctgc agtgggtgcg
     4801 ccggggccgg atgttgcgtt tgacgtggag gctggaaggc ttgggaaagg tcgcgtcagt
     4861 gagcctggtg gatggacggg tgctcgacga ctggggacgg gtccgcccct ctcccgccgc
     4921 gcgacccagg gaagccggcg ctatcagctc gtgagccgga ccaggtagct cccctccgtc
     4981 tcttccagcg tgtagtcccg gacgacagca cccgatgcct taagtgtccg cagcaggccg
     5041 cgcacccgag ttcgaatcgg tgcgcccgtg ccgcctcgtc cacggccagt tataagccgg
     5101 acgactgcgc ccggccgggc cttggcctgg gcacggagaa accgctcggc gttcgcggct
     5161 gcctccagga ctgtctggcc gtgcaggtcg aaggtcgcgt ccgcggtgcg gtcggtccag
     5221 tcgcgcatgg cggaagtttg tgggggatca gctgcccccg tccagattgg gagcctatac
     5281 gtgcaccttt ccgaagctgt cgcccttcac tcgagaccca tcggctcccg gagcacacgc
     5341 tgggcgcgcc tcccctccct tctcttcacc tggctgacgc ttctcttctc ggcctgcaac
     5401 tattctgggg atcccatccg aatcggcctg gccggctcat tgagtgatcc ggtcggccgg
     5461 cccatgaaac gcgcggccga gctggccgtc gagcagatca atgcgcaggg cgggatccag
     5521 ggccgtccgc tcgagctgct cgagcgggac gattatgccg atcccgactc cgcggtcttt
     5581 gtcgccaccg acctctacga ggccggcgtg tcggccgtga tcggccatct attctccagc
     5641 accaccctgg ccgcggctcc ggtctacaac ggcggctccg cgccggttgc ggccatctca
     5701 ccatcgtcgt catcgcccga cgtgaccact gccggagact acacctttcg catctgcccg
     5761 agcgacctgg cccacggcgt cgccctggct cggtgggtgc acgataccct ccggctcgag
     5821 cgcggggcga tgctctacct gaatgaccag tacggccgcg gagtgcggca gatgttcgtg
     5881 cgagagttca cccgccgcgg tgggatcctc ctggcgatcg acccctacct cggcgatatc
     5941 cccgatgtgg ggccgtacct ggaccgcctg gagaagatcg gcggggttga gttcctcgtg
     6001 gtcgcgggga atcggggcga gggtgaggaa atccttcgtc aggcccggca acgaggactc
     6061 cggatgccgg tgctgggcgg cgacgggctg gaagggatcg aagaggcggg cgcgatcgcc
     6121 gatggcgtgt acctctcgtc cgcctatctc cccaccatcg catctccggc caaccgagcc
     6181 ttccttcagg cctatcacaa gaaattcccc accgccggct tgcccaacca gccggccgca
     6241 gcaacctacg atgcggtata tctgctgcgg gatgtcatca cgagagccgg acccgaacgg
     6301 gcggcggtac gtcgcgagct ggcgcgggtc gggaccggag cgccggcgtt ccagggcgtc
     6361 accggcacag tcgccttcga tgcccggggc gacgttccca accaggccgt gtacatcggc
     6421 atggtacacg acggggctgt gcgcctggcg gggggtcagt gatgctgagc agtctccgaa
     6481 gccgggttct cagcgggatg gtgctcctga tcgccctggt cttcgccatt gccctgatag
     6541 gggtgcggac gatccaatcg ctcgaccgat cggttgacca ggaactgtcg ctgttgctgg
     6601 agagcacgga tctcagcaac gggctcattg catcgttgag ctcggaggtg cgctccgccg
     6661 aacagtatct cgtgcacccc gcggagacct ttcggcgcag gttcatcgat gatggagact
     6721 cggcctacgt ctaccagcgg cgctaccgga cgctcaaggc actgaccacg tcggaccggt
     6781 acatcgtcaa caagattgct tccaatcagg cagatctcga ggtgacgtac gcgacggccc
     6841 acgccctgac cgatctggga aggctcgatg aggcacgccg cctggccgac catgcccggg
     6901 caccggcgga cacgctcctg ggagacgtgc gtgctctggc cctggcgcaa aacaaccgat
     6961 cgctggctcg agccaacgag ctccgacagg aggcgggaca ccgccggacg ctcctctggg
     7021 tgctcttcct cgcctcgctc ggaattggca tcggcgcctc actctggacc gtgcgctcgg
     7081 tcgatggacc gctcgggcgg ctcgtggccg cagccgatcg gttcggggcc ggcgatctcc
     7141 ggcgggtcca gctgaacaag atgcccaccg agctcgacca gctggcccgt gccatggacg
     7201 gcatggccgg gcgccttcga ggcgtggtgg tctcggtggt gaaggaggcc agccagatcg
     7261 gcaacagcgc cagcgacttc tcggcgatga gtcaggagct cgccgccagc agcggcgaga
     7321 tctcgaccgc catggtgaag atcgcctcca gcgccgagca gcaggtgcga gggatggaaa
     7381 aggcggacgc cctgttgctc aatctccggc agatcgcgga gactaacgcc accgcctcgg
     7441 cccgaatggt ggagctgggc gatcgcatcc gggagctcgc ggcccgccat aagggagacg
     7501 tggaggcagc cggccagacg ctgctcgcta tccgtgaagt ggtgggcacc tcggctcgcc
     7561 aggtacagga gctctcccgc ttgtccgaac cgatcaccga cttcatcgac ctcattcgcc
     7621 agatctcctc ccagaccaac ctgctggcgc tcaacgcggc gatcgaggcg gcacgggccg
     7681 gcgaacacgg acgcgggttc gccgttgtag ccgaagaggt acgccggctg gctgactcca
     7741 gctccacggc ggcggaggaa gtggccaaga cagttcagtt catcaggaat caggtacgtg
     7801 atgtatcgga gaccatggat gtgggttcgg ccaaggttca tggcatcgag gcagtggcca
     7861 tggctgcggc cagggcgctg gaggacatcg cggcggcggt gcaggaggtg cacaccgcag
     7921 caagcgaggt ggtgcgggaa gcggaagcca accgtcagat tgtcggccag ctcggggaaa
     7981 gaacccagga agtgagccag gccgccaccg agcacgcctc ggccagtgag caggtcaccg
     8041 cagccgcaga ggagcagacc gcgtcgactg aggagatggc ggcagcagcg gg
//
LOCUS       DASYRV010000130         1631 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2726998, whole genome shotgun sequence.
ACCESSION   DASYRV010000130 DASYRV010000000
VERSION     DASYRV010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2726998"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..530)
                     /locus_tag="VGQ24_03255"
     CDS             complement(<1..530)
                     /locus_tag="VGQ24_03255"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8453882.1"
                     /translation="MLAGNLTEGVSVALENLRSNKLRSFLTILGVVIGVATVMLMASI
                     VDGVRTQVFNALNAATPNAFYVMRYFSQTPLNPQNLPYEVRIRPVVSAEDADAIRREE
                     NIRHSGLWLQSFVRVEYQGARSQGLWVLGADDAYMEIKGGTVAAGRFFSQGELNGAEV
                     AVLELELSRRLFGRQNP"
     gene            complement(535..>1631)
                     /locus_tag="VGQ24_03260"
     CDS             complement(535..>1631)
                     /locus_tag="VGQ24_03260"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEV8453883.1"
                     /translation="DNLRSAMIGTNTFQVRRTPLQVGFLDDSMMREIAKRPIISKADA
                     DLVRRAFPDAEAVSLQSGWPTPIADISYRNRTIGSVTVFGVTPEYQVVQDYRFSAGEP
                     LSAPDVEERRQVVVVGAEVAEKLFDAAEFAVGKRIRIGGKEMTIKGVVGRKGRVLGQS
                     FDGFSLMPITTFEAIYGRRLTTTISIKLQPGGEFPEAMSRAQEAMRLAHRLHPTQVDD
                     FSLDKADALVAFWTNLTGVLFTIIPAVVCIGIVVGGIVIMNIMLMSVNERTREIGIRK
                     SLGARQRDILRQFLVEAVLLSMLGGIMGILGGALLALLISSVSPLPARVTPWSVGVAL
                     LLGAGTGILFGVYPASRAARLDPITALRQE"
BASE COUNT          282 a          556 c          541 g          252 t
ORIGIN      
        1 ggattctggc gcccgaagag acggcgggac agctcgagct cgagcaccgc cacttcggcg
       61 ccgttcagct cgccctgcga gaagaagcgc cccgccgcca cggtcccgcc tttgatctcc
      121 atgtaggcgt cgtccgcgcc cagcacccag aggccctgcg agcgcgcccc ctggtattcg
      181 acccggacga aggactgcag ccagagcccg gagtgccgga tgttctcctc gcggcggatc
      241 gcatcggcat cctcggcgct cacgaccggg cggatgcgca cctcgtaggg aaggttttgg
      301 ggattgagcg gcgtctgcga gaaataccgc atcacgtaga acgcgttcgg cgtcgcggcg
      361 ttgagcgcat tgaagacctg cgtccggacc ccgtccacga tcgaggccat cagcatgacc
      421 gtggcgacgc cgatcaccac gccgaggatg gtgagaaagg agcgcagctt gttggagcgc
      481 agattctcca gcgcgacgct gactccctcg gtcagattcc cggcgagcat gggcctactc
      541 ttgccgcagc gcggtgatcg gatcgagccg tgccgcccgg ctggccgggt acaccccgaa
      601 caggatcccc gtgccggcgc cgagcaggag ggccacgccg accgaccacg gtgtcacccg
      661 ggccggtagg gggctcacgg acgagatcag cagggcgagc aaggcgcctc ccaggatccc
      721 catgatcccc cccagcatgg aaagcagcac ggcctcgacc agaaactgcc gcaggatgtc
      781 gcgctgccgg gcgccgagcg atttgcggat tccgatctcg cgggtgcgct cgttgaccga
      841 catcagcatg atgttcatga tcacgatccc gccgaccacg atcccgatgc agaccaccgc
      901 cgggatgatg gtgaacagca cgccggtgag attggtccag aaagcgacca gcgcatcggc
      961 cttgtccagc gagaagtcgt ccacctgcgt cgggtgcagc cggtgggcca gccgcatggc
     1021 ctcctgcgcg cgcgacatgg cctccggaaa ctccccgccg ggttgcagct tgatggagat
     1081 ggtcgtcgtc agccggcggc cgtaaatcgc ctcgaaggtg gtgatcggca tcagggagaa
     1141 gccgtcgaag gactgcccca gcacgcggcc cttccggccg acgaccccct tgatcgtcat
     1201 ctccttgccg ccgatccgga tccgcttgcc gaccgcgaac tccgcggcgt cgaagagctt
     1261 ctcggccacc tccgcgccga ccaccaccac ctggcggcgc tcctcgacgt cgggcgcgct
     1321 gagcggctcg cccgcggaga atctgtagtc ctgcaccacc tgatattccg gggtgacccc
     1381 gaagacggtc acgctgccga tggtgcggtt gcggtagctg atgtcggcga tcggggtggg
     1441 ccagcccgac tgcagcgaga ccgcttcggc atcggggaag gcccggcgga ccagatcggc
     1501 gtccgctttc gagatgatgg ggcgcttggc gatctcccgc atcatcgaat cgtcgagaaa
     1561 cccgacctgc agcggggtcc ggcgaacctg gaacgtgttg gtgccgatca tggcactgcg
     1621 gagattatcg c
//
LOCUS       DASYRV010000131         1940 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1502771, whole genome shotgun sequence.
ACCESSION   DASYRV010000131 DASYRV010000000
VERSION     DASYRV010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1940)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1940)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1940
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1502771"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            144..1088
                     /locus_tag="VGQ24_03265"
     CDS             144..1088
                     /locus_tag="VGQ24_03265"
                     /inference="COORDINATES: protein motif:HMM:NF023697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3618 domain-containing protein"
                     /protein_id="HEV8453884.1"
                     /translation="MSEYERKNPGLPYEPTAQKFDADIEGRSDKSPEEIEREIGQTRN
                     RLSRDIDELGNKLSPQNLKEEAKSAIKGAAHGAVSNVGEQARRTGSRLVEAIRENPLP
                     VIAFGAGVTWLLTQRSRSEVSGSRMARYAYTGPERRQADSWQSGSRGRVGGTVSGVKD
                     SVSEAASSVAERAGEFKDRAGERIGELGSEARRQTRRIKTNLEHAAEENPLALAIGAA
                     VVGLALGMLLPGTRREDELMGSSRDQLVDRAERTAERVKDAAVEAGRELKETVRTEIE
                     EHKPEVKQVVQQAGQTVKEQVKESARRVKKEAKDAAKG"
     gene            complement(1180..1680)
                     /locus_tag="VGQ24_03270"
     CDS             complement(1180..1680)
                     /locus_tag="VGQ24_03270"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEV8453885.1"
                     /translation="MKVLVIRHGPAGDPEAWKREGRDDRLRPLSPDGKKDMRQAASGL
                     ATLQPHVDVVASSPLVRAIQTAEIIASEYDCEVVTVDELVPDADPARTLEWIGTQRAD
                     WTVALVGHEPHLSALVSYMLGRKGSAFVELKKGGACLLEVGSFSPGSSMLKWLLTRRE
                     LVRLGE"
BASE COUNT          392 a          613 c          653 g          282 t
ORIGIN      
        1 gccatcgcag gctacgccat gcttcggcgc ggactcggtg aactgaagcg ggtggacctc
       61 gcccctcgca gaacagtgga aaacatcaag gacgatgttc aggccataaa agatgacgtc
      121 caatgggcaa aggagcagcg gtcatgagtg agtacgagcg aaagaaccca gggctccctt
      181 atgagccgac ggcccagaaa ttcgacgccg acatcgaggg ccgcagcgac aagagccccg
      241 aggagatcga gcgcgagatc ggacagaccc gcaaccgtct gagccgggac atcgatgagc
      301 tgggcaataa gctcagcccg caaaacctga aggaagaggc gaagagcgcg atcaagggtg
      361 cggcgcacgg agcggtgtcg aatgtgggcg agcaagctcg ccgcacgggc tcccgcctgg
      421 tggaagccat ccgggagaac ccgttgccgg tgatcgcctt cggggccgga gtgacgtggc
      481 tcttgaccca gcgctcccgc agtgaggtgt cgggcagcag gatggcccgc tacgcctata
      541 ccggacccga gcggcgccag gcagatagct ggcagagcgg gagccggggc cgggttggtg
      601 gtaccgtgag cggagtgaag gattcagtca gcgaagcggc gagcagtgtt gccgagcgcg
      661 ccggcgagtt caaggaccgg gccggggagc ggatcggcga gttggggagc gaagcacggc
      721 ggcaaacccg ccggatcaag accaacctcg agcacgcagc ggaggagaac cctctggcgc
      781 tggcgatcgg cgcggccgtg gtcggtctgg cgttgggcat gctcctcccg ggcacccggc
      841 gcgaagacga gctcatgggc tcgtcccgcg atcagttggt cgatcgagca gagaggacag
      901 ccgaacgggt caaggatgcc gcggtcgagg ccggccgcga gctcaaggag accgtccgga
      961 ccgagatcga ggagcacaag cccgaggtca agcaggtggt ccagcaggcg ggtcagaccg
     1021 tgaaggaaca ggtcaaggaa tcggccaggc gggtgaagaa ggaagccaag gacgcggcca
     1081 aaggctgaac cagctccatg agtcgtagtt tcgggtcgac gctccggcca tgctccagtg
     1141 agctggtcgg agcgtcactc acatccacga cacaacaccc tattccccaa ggcgaaccag
     1201 ctcgcggcgg gtgagcaacc atttcagcat ggaggagccc ggcgagaagg accccacctc
     1261 caacaggcag gcacctccct ttttcagctc gacgaatgca ctacctttgc ggcccagcat
     1321 gtagctgacc agcgcactca aatggggctc gtgccccacc agggccaccg tccagtccgc
     1381 ccgctgggtt ccgatccact cgagcgtcct ggccggatcc gcatctggta ccagctcgtc
     1441 caccgtcacg acctcgcagt cgtattcgct ggcgatgatc tccgccgtct ggatcgcccg
     1501 caccagcggg ctgctggcga cgacgtcgac gtgcggctgc agcgtggcaa ggccggatgc
     1561 ggcctggcgc atgtccttct tgccgtcggg agaaagcggc cgcaaccggt cgtcccgccc
     1621 ctccctcttc caggcctcag gatctcccgc cggaccatgc cggatcacca gcaccttcac
     1681 acgagctcca tttctctgtt ccgcttgatg tactatgccc aggaggaaag gggaagtgat
     1741 gaggcgggtg cctgtgaagc gagaggagcc cgggacattc ccgggctcct cttcaatcca
     1801 tcaggaagac gcagactacc gtttggccgg tccgcctgcc tcttcatctt cgctctcgtc
     1861 ggacagcgcg gcgaccgccg acttgaggtc gcaggcgaga tcccgttcac gccgcagcgc
     1921 cgcgatgagc gcctcggcct
//
LOCUS       DASYRV010000132         2932 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_257518, whole genome shotgun sequence.
ACCESSION   DASYRV010000132 DASYRV010000000
VERSION     DASYRV010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2932
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_257518"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..1363)
                     /locus_tag="VGQ24_03275"
     CDS             complement(56..1363)
                     /locus_tag="VGQ24_03275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEV8453886.1"
                     /translation="MVNISARPLVTLSFLIVGLWTPAVAQAGPDSTVRPAPVLIVPDA
                     VWDGVADAPKAGWVVVVMGKRIEVLGPAQQVKVPVGAERIDLPGTTLIPGLIEGHAHL
                     FLHPYNEALWDDQVLKEPIGLRMARAVASAAATLRAGVTTERDLGTEGAFNYDVQLKR
                     AIDEGIVSGPRLIAVTRAIVATGSYGPRRSDYSFEPLQGAEEASGVEEVARVVRSQIG
                     QGAAWIKVYADYRWAPNGEARPTFSQEELNTLVETARGSGRPVAAHATTAEGMRRAVL
                     AGVETIEHGDEGTREVFKLMRKKGVALCPTLAASEAYAQYFEDWTRGLEVPPRSVVDK
                     RASFKAAVDEGVTICFGGDVGVFPHGDNVRELEAMVANGMTPLDALRAATSGNARIFH
                     LGDRGRVAQGLLGDLVAVEGDPTRDVSALRRVRFVMKDGERVR"
     gene            complement(1440..1913)
                     /locus_tag="VGQ24_03280"
     CDS             complement(1440..1913)
                     /locus_tag="VGQ24_03280"
                     /inference="COORDINATES: protein motif:HMM:NF020387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RES domain-containing protein"
                     /protein_id="HEV8453887.1"
                     /translation="MPTVYRLAKRRYPIYDGSGAALEGARWNSPGRLLIYTSEHYATA
                     VLEKLVHAGRTQLPGAHHAAAIQIPDDLTIEEFDPSASPGWDAEDSAAARAYGDEWHA
                     GGRSAVLIVPSLPGQPVERNFIINPGHPDAARIRVMPSFNVVWDGRLFGPPAGSL"
     gene            complement(1932..2375)
                     /locus_tag="VGQ24_03285"
     CDS             complement(1932..2375)
                     /locus_tag="VGQ24_03285"
                     /inference="COORDINATES: protein motif:HMM:TIGR02293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin Xre/MbcA/ParS toxin-binding
                     domain-containing protein"
                     /protein_id="HEV8453888.1"
                     /translation="MASYPDVLKVSQTLGGFKTLREKVLTVADMERAVEKGLPFAALK
                     YVVRHFSPRQKTRVQQIVMPRSTLQRREEEGRLRPAESERLERIARLATLAEQVWESP
                     EEAQRFLTTPHPQLDNQAPLDLAATDLGTRRVETLLWKLEHSLPV"
     gene            2504..>2932
                     /locus_tag="VGQ24_03290"
     CDS             2504..>2932
                     /locus_tag="VGQ24_03290"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEV8453889.1"
                     /translation="MPLSSFHPVVARWFEHRFGEPTAPQRFGWEAIRAGRDTLISAPT
                     GSGKTLAAFLHSLDQLFREGLEAPLPDETRIIYVSPLKALSADIHLNLAEPRREIRRL
                     AEEMGYETPRITAAIRSGDTPAADRAAMIRKPPHILVTTPE"
BASE COUNT          497 a         1014 c          923 g          498 t
ORIGIN      
        1 cggggaacat ggagggatac ggtcggcggg taggtgacgc tggtcacctc tcggctcacc
       61 tgaccctctc accatccttc atcacaaacc gaactcttcg cagggccgac acatcccgcg
      121 tcggatcgcc ctccaccgcg accaggtcgc ccagcagacc ttgggccact cggccccggt
      181 cgcccaggtg gaagatcctg gcattgccgc tggtggctgc ccgcagcgcg tcgagcgggg
      241 tcatcccgtt cgccaccatc gcctcgagct cgcgcacgtt gtcgccgtgg gggaagacac
      301 cgacgtctcc gccgaagcag atcgtcaccc cttcatcgac cgcagccttg aagctcgctc
      361 gcttgtccac cacggatcga ggcggaacct ccaaccctcg ggtccagtct tcgaagtact
      421 gggcgtacgc ctccgaggcg gcgagtgtag gacagagtgc gacgcccttc ttgcgcatga
      481 gcttgaacac ttcgcgggta ccctcgtcac catgctcgat cgtctccacg ccggcgagca
      541 cggctcgccg catgccctct gcggtcgtcg cgtgcgcggc gaccggccgg ccactgcccc
      601 ttgcggtctc gaccagtgtg ttcagctctt cctgggagaa cgtcggccga gcctcaccgt
      661 ttggagccca gcggtagtcg gcgtagacct tgatccacgc ggcgccctgg ccgatctggc
      721 tccggaccac ccgcgcgact tcctccaccc cggaagcttc ttccgcgcct tgcaaaggct
      781 cgaaggagta gtcgctgcgc cggggaccgt agctgccggt cgccacgatc gcgcgggtca
      841 ccgcgatgag ccgcggaccg gagacgatac cctcatcaat cgcacgcttg agctgcacgt
      901 cgtagttgaa ggcgccttcg gtgcccagat cgcgctcggt ggtgacgccg gctcggagag
      961 tggccgcggc actcgccacc gcgcgagcca ttcggaggcc gatcggctcc ttcaagactt
     1021 gatcgtccca gagcgcttcg ttgtagggat gcaggaagag atgcgcgtgc ccttcgatca
     1081 gtccggggat gagcgtggtg cccggcagat caatccgttc agcaccgacc ggcaccttca
     1141 cctgttgagc aggaccgagc acctcgatgc gcttccccat gactacgacg acccagccgg
     1201 ctttcggcgc atccgcgact ccgtcccaca ccgcgtccgg cacgatgagc acgggggcag
     1261 gccggactgt gctgtcgggc ccagcctgag ccacggcagg ggtccagagt cctactataa
     1321 ggaaggagag agtgaccaac ggccgcgcag aaatgttcac catactcccg ctccttgaga
     1381 attcaccaca gaggcgcaga ggacacagtg tcctcctttc cctctgtggt gaacagcctt
     1441 tagagcgagc ccgccggtgg gccgaagagc cggccgtccc agaccacatt gaaggagggc
     1501 atcaccctga tccgcgccgc gtcgggatga cctggattga tgatgaagtt acgctccacc
     1561 ggctgacccg gtaatgacgg gacgatgagg accgcgctac gcccgccggc gtgccactcg
     1621 tcgccgtatg ctcgcgcggc agccgagtct tcggcatccc aaccgggaga cgcgctcgga
     1681 tcgaactcct cgatggtgag atcgtcgggg atctggatcg cggcggcatg gtgcgcgcca
     1741 ggcaactgag tgcgcccggc gtgcaccagc ttctcgagga ccgcggttgc gtagtgctcg
     1801 gaggtgtaga tcaggagccg ccccggcgag ttccagcgag cgccttcgag cgcggcgccg
     1861 ctcccgtcat agatcggata gcggcgcttg gcgagacggt aaacggtggg catgccgctg
     1921 ccgcaaccgc gtcagacggg caggctgtgc tcgagcttcc agagcagcgt ctcgacccgg
     1981 cgagtgccga ggtcggtggc cgcaagatcg agcggagcct ggttgtcgag ctgaggatgc
     2041 ggggtggtga gaaacctctg cgcctcctcc ggcgactccc acacctgctc cgccagcgtg
     2101 gccaggcggg cgatccgctc cagccgctcg ctctcggccg gtcgaagccg gccttcctcc
     2161 tcccgccgct gcagggtgga ccggggcatc acgatctgct ggacccgggt cttctgccgg
     2221 ggcgagaagt gccgcactac gtatttgagc gcggcaaagg gcagcccctt ctccaccgcg
     2281 cgctccatgt cggccacggt taagaccttc tcccgcaagg tcttgaaacc accaagagtc
     2341 tggctgacct tcaggacatc gggatagctg gccatggatt ctccgggttg accatctggg
     2401 taaaatataa tcccaggtgg gccacagcgc cagggttgcg aggtactctc ccgatcgtgt
     2461 catcctgagc gaagcgagga atctctccgg ttatatttga ccgatgccgc tgtcctcgtt
     2521 tcatccggtc gtcgcccgct ggttcgagca ccgcttcggt gagcccaccg ccccccagcg
     2581 gttcggctgg gaggcaattc gagccgggcg ggacaccctc atctccgctc cgaccggatc
     2641 gggaaagacg ctcgcagcct tcctccactc gctggatcag ctcttccgcg aaggcctcga
     2701 ggcgccgctg ccggacgaga cccgaatcat ctacgtctca cccctcaagg cgctgagcgc
     2761 cgacatccat ctcaatctgg cggagccccg gcgagagatc cgccgactgg cggaggagat
     2821 ggggtatgag accccaagaa tcacggcagc catccgctcg ggcgatacac ctgcggccga
     2881 ccgggccgcg atgatccgca agccgccgca catcctggtc accacccccg ag
//
LOCUS       DASYRV010000133         1737 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_49792, whole genome shotgun sequence.
ACCESSION   DASYRV010000133 DASYRV010000000
VERSION     DASYRV010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49792"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..572
                     /locus_tag="VGQ24_03295"
     CDS             <1..572
                     /locus_tag="VGQ24_03295"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8453890.1"
                     /translation="TGLGLSTVYGIVKQSEGYVWAYSEPGQGTTFKIYLPLRPGAVSP
                     ARPDSAPGHTVAGETILVVEDEAAVRHMMTRALEDAGYRVLQAAGAAEAIEVVARTPG
                     KISLLLTDVVMPGKNGRELAERLEEVNPGIPVLFTSGYTDGEIERRGLLQPGAAFIQK
                     PLTPRALAEAVRKILEAARPLPEERGGAA"
     gene            complement(594..1451)
                     /locus_tag="VGQ24_03300"
     CDS             complement(594..1451)
                     /locus_tag="VGQ24_03300"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEV8453891.1"
                     /translation="MSTTIAQEQRSYINVGQENSTEIELYYEDHGSGRPVVLIHGWPL
                     SGASWEKQVAALLAAGHRVITYDRRGFGKSSQAATGYEYDTFAEDLHKLVTALDLHDF
                     ALVGFSMGGGEVARYIGRYGTDRVSKAVFMAAVPPFLLKTADNPNGVDGSVFDGIKKG
                     IAADRPAFLTQFLANFYNVDVLGGKQISDEVVRLSWNIAAGASPKGTLDCVTAWYTDF
                     RKDLPRVDVPTLVIHGDADRILPIAVTGNRTHEAIKGSRLVVVKGGPHGLNWTHADQV
                     NAELVSFLE"
     gene            complement(1453..>1737)
                     /locus_tag="VGQ24_03305"
     CDS             complement(1453..>1737)
                     /locus_tag="VGQ24_03305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453892.1"
                     /translation="LTPEQRAQLLERLRSKLDSAGRLRLVSSGSRSQLRNREDVTERL
                     RSVVANALAVRKKRKPTRPSRASKAARLEAKRRRAMTKERRRPVRPSKEE"
BASE COUNT          283 a          568 c          550 g          336 t
ORIGIN      
        1 ggaccggtct cggcttgtcc acggtgtacg gtattgtgaa gcaatcggag ggttacgtct
       61 gggcttatag tgagccgggg cagggcacca cgttcaagat ctatcttccg ctccgacccg
      121 gggcggtgtc gccggcacgg ccggactcgg cgcccggaca cacggtggcg ggcgagacga
      181 ttctcgtggt cgaggacgag gcagccgttc ggcacatgat gactcgggcg ctggaggacg
      241 ccggctaccg cgtacttcag gctgcagggg cggccgaggc gatcgaggtc gtggcccgca
      301 cgccgggcaa gatcagcctg ctgctgaccg atgtcgtcat gccaggcaaa aatggtcgcg
      361 aactggccga gcgccttgaa gaggtgaacc cgggaatccc cgtgctgttc acgtcgggct
      421 acaccgatgg cgagatcgag cgccgcggcc tgctgcaacc gggcgcggcc ttcatccaga
      481 agcccctgac gccccgcgca ctcgctgagg cggtgcggaa gatcctggaa gcggctcgtc
      541 ctctgccgga ggagcgcggc ggcgctgctt agtgcggccc tgcttcctgg tgcctactcg
      601 aggaaactga ccagctcggc attcacctgg tccgcgtgag tccagttcag gccgtgtggt
      661 ccacccttta ccacgaccag acggcttccc ttaatcgcct cgtgggtccg gtttccggta
      721 acagcgatcg gcagaatacg gtcggcatcg ccgtgaatga ccagcgtggg cacgtccacc
      781 cgcggtagat ccttgcggaa gtcggtgtac caggccgtga cgcagtcgag tgtgcccttt
      841 ggggaagcac cggccgcgat gttccagctg agccggacta cctcgtcgct gatctgcttg
      901 ccgcccagaa cgtcgacgtt gtagaagttc gccaggaatt gggtgaggaa cgcgggccga
      961 tccgcggcga tccccttctt gatgccatcg aagacgctcc cgtccacacc gttgggatta
     1021 tcagcggtct tcagcaggaa tggcggtacc gcggccatga ataccgcttt gctgacccgg
     1081 tcggttccgt accgcccgat gtagcgagcc acttcgccgc cgcccatcga aaacccaacc
     1141 agggcaaagt catggaggtc gagcgcggtc accagcttgt gcaggtcttc cgcaaaggtg
     1201 tcgtactcgt agcctgtcgc cgcttggctg gatttgccga accctctgcg atcgtaggta
     1261 atgacccggt gacccgcggc cagaagggcc gccacctgct tctcccagga agctccgctg
     1321 agcggccatc cgtgaatcag caccactggc ctacccgagc cgtggtcctc gtagtatagc
     1381 tcgatctcgg tggagttttc ctgaccaacg ttgatgtagc ttcgctgttc ctgcgcgatg
     1441 gtggtgctca tctcactcct ccttgctggg gcgcacgggt ctgcgccgtt ccttagtcat
     1501 cgctcgacgt cgcttggcct ccagtctcgc ggccttggac gcccgactcg gcctggtcgg
     1561 ctttctcttc ttccgcacgg ccagcgcgtt cgcaaccact gaccgcagcc gctccgtcac
     1621 atcctcccgg ttacgaagct ggctgcgcga tccgctcgac accagtcgca agcgaccggc
     1681 cgagtcgagc ttgctcctca gacgctccaa caattgagcc cgctgctcgg gcgtgag
//
LOCUS       DASYRV010000134         5506 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2126808, whole genome shotgun sequence.
ACCESSION   DASYRV010000134 DASYRV010000000
VERSION     DASYRV010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5506
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2126808"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..239
                     /locus_tag="VGQ24_03310"
     CDS             <1..239
                     /locus_tag="VGQ24_03310"
                     /inference="COORDINATES: protein motif:HMM:NF014690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0043772 - acyl-phosphate
                     glycerol-3-phosphate acyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycerol-3-phosphate acyltransferase"
                     /protein_id="HEV8453893.1"
                     /translation="ALLVLLTGYVSLGSIAAAAVLPFAVYLLERPTTAELLWIDAAVA
                     AGVIFLHRRNIERLIRGTESRFGRRARAATTPPP"
     gene            236..1234
                     /locus_tag="VGQ24_03315"
     CDS             236..1234
                     /locus_tag="VGQ24_03315"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEV8453894.1"
                     /translation="MTLVAVLGAGSWGTTLANLLAAKGETVRLWAYEPEVVEAINRSH
                     ENPMFLPGVRLEAGLRAFADPREAVADAPVIVSAPPSHAVRSVVNRIRGMVRPGTLVV
                     SATKGIETDTLALMSAVFEECLPEARFAALSGPSFAIEVCQGQPTLVVAAARDESTAR
                     DAQRIFATPRFRVYSHDDVVGVELAGALKNVIAIAAGILEGLGMGHNPRAALITRGLA
                     EITRLGVALGAHPLTFSGLAGMGDLILTTTGDLSRNRGLGVALGQGQTLDEYRAAHRS
                     VAEGANTSKAGVALGARTGVELPITQKVCEVLFSGKPAREGIAELMARELKSEQWR"
     gene            1231..1632
                     /locus_tag="VGQ24_03320"
     CDS             1231..1632
                     /locus_tag="VGQ24_03320"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEV8453895.1"
                     /translation="MTTTTTTRPVQEFYSIGEVCGLTDLKPHVLRYWESQFRFLNPAK
                     NRSGNRVYKGREVELIMLVKHLLYTEKFTIEGARQRVDHYRRTGELRVSARRAFETEL
                     ALEVRSTIEEAVAILEGKKPVKQSVTANSKQ"
     gene            1697..2446
                     /gene="surE"
                     /locus_tag="VGQ24_03325"
     CDS             1697..2446
                     /gene="surE"
                     /locus_tag="VGQ24_03325"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEV8453896.1"
                     /translation="MNILVSNDDGMLAPGIALLAEACREVGTVTVVAPDREQSGTSHS
                     LTLHRPLRPTRRPDGAWQIDGTPTDCVMLALQALMPERPDFVFSGVNHGPNMGEDVLY
                     SGTVAAAMEAVTLGVPGIGISFAGNQPETMATYHHLLVELIQRITSVRDFPEQMLLNI
                     NLPRIPASEVKGIQVTKLGSRYFSESLTRMKDPWGREIYWIGGGTITWTGTENSDHLA
                     VAEGFISVTPLHMDLTNYSLLETVRGWSLEG"
     gene            2428..3093
                     /locus_tag="VGQ24_03330"
     CDS             2428..3093
                     /locus_tag="VGQ24_03330"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HEV8453897.1"
                     /translation="MVAGGVGEGDSYGGYRNRLVEILRRKGVRDLSVLRAVQMVPRHL
                     FVPESVRHRAYDDTALPIGSGQTISQPYVQARYLELIGLTGREKVLEIGTGSGYQTAL
                     LALLASMVFSVERVTHLAQGARTALANAGIRNVTVLVGDGTLGWRSFAPYDAILVSAA
                     SPEIPAPLVEQLAPGGRMVIPLGDRVSQTLTLVERNEGGVRASTVADVRFVPLVGQFG
                     FSE"
     gene            3104..3733
                     /locus_tag="VGQ24_03335"
     CDS             3104..3733
                     /locus_tag="VGQ24_03335"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEV8453898.1"
                     /translation="MLSSFFHWLADTILTLGYPGIIVLMAIESSVLPLPSELVMPPAG
                     YLAAKGQMDSVLAVAAGTLGSVIGALVNYALALFVGEPLLRKYGKYVLVSARSLDRTE
                     AFFRRHGEISTLIGRLLPVVRHLISIPAGVSRMSLGRFIFFTALGAGLWCGILTYLGW
                     IIGRHGEQVEAVIGTYVHHTLLSYILPGVVILLGAYVLWQRRGRSRVAE"
     gene            3730..4002
                     /locus_tag="VGQ24_03340"
     CDS             3730..4002
                     /locus_tag="VGQ24_03340"
                     /inference="COORDINATES: protein motif:HMM:NF012911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HEV8453899.1"
                     /translation="MTDLRYLVSGEVQGVGFRWFVARHARSLGLSGYARNLPDGRVEV
                     VVSGPAGVLPDLEQLLRRGPAYARVEKVERSDEPPAFPIGQSFDII"
     gene            4025..4561
                     /locus_tag="VGQ24_03345"
     CDS             4025..4561
                     /locus_tag="VGQ24_03345"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEV8453900.1"
                     /translation="MPETTTIADRVLATLRPIPDYPKPGILFQDITPVLRDGQLLRNV
                     VLEMCRPFQESAVTHVMGIEARGFILGGAMATTLGAGFVPARKPGKLPWERATEAYDL
                     EYGTDSLEAHRDAWKSGSRVLIVDDVLATGGTARAAGQLALSLGAELVGWSFLLEITA
                     LNGRDRLSGAPCHTVARC"
     gene            complement(4566..>5506)
                     /locus_tag="VGQ24_03350"
     CDS             complement(4566..>5506)
                     /locus_tag="VGQ24_03350"
                     /inference="COORDINATES: protein motif:HMM:NF044870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HEV8453901.1"
                     /translation="AGGTTRSVTLTSDADTEVQLEVTCPGSSPTIVGFVPLQGSPYGV
                     AVSAAGVIYAAQIGSSTLARGALATKSFTSSVVVGSTPPHVVFNPAGTTAYATLQTGQ
                     GLAVVDVATNTLTTTVPLASDGFNLIVAPDGQRVYATTANGSLYVVNAATNTVITTLS
                     VGAAANGLAFSPDGTVLYVSSRDAGTVVAVDPVTNTITRTYTLGGMPQRLAVALDGSE
                     LYVANEVSGLDVVDVASGTVNSISFGTAAYGLGLTPDGAQIYVLLPQMGEVRVLNRAT
                     LDAVKTLLIGGTPRNVGFASDGTALVANEQGILFIQ"
BASE COUNT          939 a         1715 c         1839 g         1013 t
ORIGIN      
        1 gggcgctgct ggtgctgctg accgggtacg tctctctcgg cagcatagcc gcagccgccg
       61 tacttccgtt tgccgtctac ttgctggagc gtccaaccac agccgagctg ctctggatcg
      121 acgcggcggt ggccgcagga gtgatcttcc tgcaccggcg caacatcgag cggctgatca
      181 ggggcacgga gagccgcttc ggccgtcgcg cgcgggcggc gaccacgccg cctccatgac
      241 gctggtcgcc gtcctcggtg cggggagctg gggaacgacc ctggcgaacc tgctcgcggc
      301 caagggggag accgtccggc tctgggccta cgagcccgaa gtcgtcgagg cgatcaaccg
      361 tagtcacgag aatccgatgt tcctccctgg cgtgcggctg gaagcggggc tgcgcgcctt
      421 cgcggacccc cgggaggcgg tagcggacgc gcccgtgatc gtatccgccc cgcccagtca
      481 tgcggtgcgc tcggtggtga accggattcg tggcatggta cggcccggca ccctggttgt
      541 gagcgctacc aagggaatcg agaccgacac cttggccctc atgtccgcgg tgttcgagga
      601 gtgtctgccg gaggcgcgct tcgcggctct ctccggtccc agcttcgcca tcgaagtgtg
      661 tcagggccag cccacgctgg tcgtggccgc ggccagggac gaatcgaccg cccgcgatgc
      721 gcaacgcatc ttcgccacgc cgcggttccg ggtgtattcc cacgatgacg tcgtcggcgt
      781 ggagctcgcg ggagcgctca agaacgtcat cgctatcgcg gccggaatcc tggaggggct
      841 tggcatggga cacaatccga gagccgcact gatcacccgg ggattggccg agatcacccg
      901 tctgggtgtg gcactcggcg cccacccgct gaccttttcc ggtctggccg ggatgggcga
      961 tctcatcctg acgacgacgg gcgatctcag ccgcaaccgt gggctcgggg tggcgctggg
     1021 ccagggtcaa acgcttgatg agtatcgcgc cgcgcaccgc agcgtggccg aaggagccaa
     1081 cacctcgaag gccggcgtgg cactcggggc gcggacaggg gtggagcttc ccatcaccca
     1141 gaaagtctgt gaagttttgt tcagcgggaa gccggctcgc gaggggatcg cggagctgat
     1201 ggcacgggaa ctcaagtcgg agcagtggag atgacaacga ccaccaccac ccgaccggtc
     1261 caggaattct actcgatcgg cgaagtctgc gggctgaccg acctcaagcc ccacgtgctg
     1321 cgctactggg aaagccagtt tcggttcctc aatccggcca agaaccgttc cgggaaccgg
     1381 gtctacaagg gccgggaggt ggagttgatc atgctggtga agcatctgct ctacaccgag
     1441 aagttcacga tcgagggcgc gcgccagcgg gtcgaccact accgcagaac gggcgagcta
     1501 cgagtgtcgg cgcggcgcgc attcgagacg gagctggcgc tggaagtccg gagcacgatt
     1561 gaggaggcag ttgcgattct cgaaggaaag aagccggtca aacagagcgt gacagcgaac
     1621 agtaaacagt gaactggcag cctcaccccc gttcaccgtt caccgtttac tgttcacgct
     1681 cttatcttga tcggcgatga acatcctggt cagcaacgac gacggcatgc tggcacctgg
     1741 aatcgccctg ctggctgagg cctgccggga ggtgggcacc gtgaccgtgg tggctcctga
     1801 tcgggagcag agcggcacat cacactcgct caccttgcac cggccgctac ggcccactcg
     1861 gcggcccgac ggcgcctggc agatcgacgg caccccaacc gattgcgtga tgcttgccct
     1921 ccaggcactg atgcccgagc gcccggattt cgtgttctcg ggggtgaacc atggtcccaa
     1981 catgggcgag gatgtgctct attccggcac ggttgcggcc gccatggagg cggtgaccct
     2041 gggagttccc gggatcggca tctccttcgc cggcaatcag cccgaaacga tggctacgta
     2101 ccaccatctc ctggtcgagc tcatccagcg catcaccagc gttcgtgact tccccgaaca
     2161 gatgctgctc aacatcaacc tgccgaggat tcccgcatcc gaggtgaaag gcattcaggt
     2221 gaccaagctg ggcagccggt acttctcgga gtcgctcacc cggatgaagg atccctgggg
     2281 ccgggagatc tactggatcg gtggtgggac catcacctgg actgggaccg agaactccga
     2341 ccatctggcg gtcgcggaag gcttcatctc ggtcactcca ctccacatgg atttgaccaa
     2401 ctactctctg ctggaaacgg ttcgaggatg gtcgctggag gggtagggga gggcgacagc
     2461 tacggcggat accgcaaccg cctggtggag atcctccggc gcaagggcgt gcgcgatctt
     2521 tccgtgctgc gcgccgtcca gatggtgccc cgccatctct tcgtgccgga gagtgtacgg
     2581 catcgggcct acgacgatac cgcgttgccg atcggcagcg gacaaaccat ctcgcagcca
     2641 tacgtgcagg cgcgatatct cgagctgatc ggcctcactg gccgggagaa ggtgctcgag
     2701 atcggtaccg gctcggggta tcagacggcg cttctcgcgc tgctggccag catggtgttc
     2761 agtgtcgaac gggttacgca cctggcccaa ggcgcccgga cggcactcgc caatgcgggc
     2821 attcgcaatg tgacggtgct ggtgggcgac ggcacactcg gctggcgatc gttcgccccg
     2881 tatgacgcga tcctcgtctc ggctgcctcg cccgagattc cggcgcccct ggtggagcag
     2941 ctcgcaccag gcggccgcat ggtcattccg ctgggcgatc gcgtatccca gaccctcacc
     3001 ctggtggagc ggaacgaggg tggcgtccgc gccagcacgg tcgctgacgt tcgtttcgtg
     3061 cctctggtgg gtcaattcgg cttctccgaa tagcggataa cacatgcttt cgagcttctt
     3121 tcactggctg gcagacacca tcctcacgct cggctatccc gggatcatcg ttctcatggc
     3181 catcgaatcg tcagttctgc cccttcccag cgagctagtg atgccgccgg ccggctacct
     3241 tgccgcaaag ggtcagatgg acagtgtcct ggccgtcgcg gcggggaccc tgggaagtgt
     3301 gatcggagct ctggtgaact acgcgttggc gttgtttgtg ggcgagccgc tactgcgtaa
     3361 gtacggtaag tacgtgctcg tctccgctcg ctcactcgac cggaccgagg ccttcttccg
     3421 gcgacacggg gagatcagca ccctcatagg ccggctgctg ccggtggtgc ggcacctgat
     3481 ctcgatcccg gccggggtgt cccgcatgag cctcgggcgg ttcatcttct tcaccgcact
     3541 gggcgcggga ctctggtgtg gcattctcac gtatctcggg tggatcatcg gtcgtcatgg
     3601 ggaacaggtc gaggcagtca tcgggacata cgtgcaccat actttgctga gttacatcct
     3661 tccgggcgtt gtgatcctct tgggtgccta cgtgctctgg cagcggcgcg gacgatcccg
     3721 ggtggccgag tgactgatct gcgatacctg gtgtcggggg aggtgcaggg tgtcgggttt
     3781 cgctggttcg tcgcccggca tgccagatct ctgggcctca gcgggtacgc ccggaatctg
     3841 ccggacggcc gggtcgaagt cgtggtgagc ggtccggcgg gagtgctccc cgatctggag
     3901 cagctgctgc gaaggggccc ggcctacgcc cgagtggaga aggtggagcg gtcggacgag
     3961 ccaccagcgt ttccgatcgg acaaagcttc gacatcatat agtcttgcct tcactggacc
     4021 ccacatgcct gagacgacga cgatagccga ccgggtgctc gcgaccctgc gccctattcc
     4081 cgattatccc aagccgggaa ttctcttcca ggatatcacc cccgtgctca gggacgggca
     4141 gctgttgcgt aacgtggtgt tggagatgtg ccggccgttc caggagtctg ccgttactca
     4201 cgtgatgggg atcgaagccc gggggttcat cctcggtggg gctatggcta ccacgctcgg
     4261 cgcgggcttc gtgccggcca ggaaaccagg aaaactgccc tgggaacgcg ccaccgaagc
     4321 ctacgatctg gagtacggga ccgattccct ggaggcccac agggacgcct ggaagtcagg
     4381 aagccgagtg ctcattgtgg atgatgtgtt ggctaccggg ggcactgccc gtgcggctgg
     4441 gcagctggcg ctcagcctcg gagcggagct cgtcggctgg agcttcctgc tggagatcac
     4501 tgcgctaaac ggccgggacc ggctctcggg tgccccttgc catacggtag cccggtgttg
     4561 agatctcatt ggatgaagag gatcccttgc tcgttggcaa ctaaggcggt gccgtccgat
     4621 gcaaacccta cgttgcgcgg agtgccgccg ataaggagcg tctttaccgc gtccagtgtg
     4681 gcacgattca gcactcgcac ttcacccatc tggggtagga ggacgtagat ctgggcgccg
     4741 tccggggtaa ggcccaggcc gtatgcggcc gtcccaaacg agatcgaatt gactgttcca
     4801 gatgcaacat cgaccacgtc cagcccgctg acttcattcg ccacgtacag ctcgctcccg
     4861 tccagcgcca ccgccagccg ctgaggcatt ccgcccaggg tgtacgtgcg cgttatcgtg
     4921 ttggttaccg ggtcgaccgc taccaccgtg ccggcgtcgc gcgagctaac gtataggacg
     4981 gttccatcgg gactgaaggc cagcccgttg gccgcagcgc ccacagagag ggtggtgatc
     5041 accgtgttgg tggcggcgtt cacgacgtac agactcccat tggccgtcgt agcgtagacc
     5101 cgctggccat cgggcgcgac aatcagattg aatccgtcgc ttgccagcgg caccgtggtg
     5161 gtaagggtgt ttgtcgccac gtctacgacc gccagacctt ggccggtctg gagggtggca
     5221 taggcggtcg tgccggccgg gttgaagaca acgtgcggtg gcgtcgatcc tacgaccaca
     5281 ctgctggtga agctcttggt tgcgagagca ccgcgagcga gggttgaact cccgatctgg
     5341 gcggcgtaga tcacgccggc ggcggagacc gccacgccat agggggagcc ctgcagcgga
     5401 acaaagccca cgatcgtcgg ggacgatccg gggcacgtga cctcaagctg tacctcggtg
     5461 tcagcatcag acgtcagcgt gactgaacgg gtggtaccac cggcca
//
LOCUS       DASYRV010000135         2092 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_465236, whole genome shotgun sequence.
ACCESSION   DASYRV010000135 DASYRV010000000
VERSION     DASYRV010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_465236"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(288..360)
                     /locus_tag="VGQ24_03355"
     tRNA            complement(288..360)
                     /locus_tag="VGQ24_03355"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(325..327),aa:Lys,seq:ttt)
     gene            complement(809..1153)
                     /locus_tag="VGQ24_03360"
     CDS             complement(809..1153)
                     /locus_tag="VGQ24_03360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453902.1"
                     /translation="MHRKHTVHVFRDLPDLIYRMLSQVSSMGERIDREIGTMKVRELP
                     PHHIMVEAIKGNVVPASRLPKLIEPKYEEFTQRTAWSLSNASTEVQRDLGRERRWSEA
                     SGFRRCSGRKCI"
     gene            1403..>2092
                     /locus_tag="VGQ24_03365"
     CDS             1403..>2092
                     /locus_tag="VGQ24_03365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453903.1"
                     /translation="MALGLAAATGGYVISRQQRASRPLIVSGQSQRARKIASLRAYAA
                     RGELGSLVPQTDAILAIREEFLQRVIDRSLPLRQYFQNGRYVARLDSAAVRLDSGLAL
                     ITLAGRGMLAGQEDSPLYADLLLQGLMTITGVDPDSGTLQASLVITDVSARRARPQDL
                     QSLLNPVAGYFGHLRAEDWNRNRQRVHLPLRVDREFVLPAIDGDVTVPESRIPISVRV
                     SAVTTLSGRMAV"
BASE COUNT          373 a          664 c          642 g          413 t
ORIGIN      
        1 ctcgacagag gtcttcgcga gcctcgcgat cgaggtactc gcccagcttc tcctcaagaa
       61 gctccttaca gttcacacgt ccgtctcccg gccaagtggg tggtccccgt attcccggca
      121 gctcgggccc gccgggaggg gcggcgttca tctgcggcct tagatgcgtg caggggagtt
      181 ataggtttgc agatagttga caggaaagct aaaagttttc tttgggcgag aatcttttgc
      241 gtaagtgact gtgccgcctt atgataggaa agaggccaca gaataaatga cccgtgctgg
      301 gatcgaacca gcgacaccct gcttaaaagg caggtgctct accgactgag ctaacgggtc
      361 acctctatac aatgagaaaa gttaccacga ctgcactgct cttttgtgca ctgcccctgt
      421 gcctgattgt ccagcaaccc gcatggcttc agctattacg gcctcgtcgg acagccggcc
      481 cgtagaccga tcaggccgac gaagacacca gctttagtcg cctgaaggcg gctccacgcg
      541 tcacctcgcg tgccgtcggg aagcatgctc tccatcctgc ataaactcat gtggggaaaa
      601 gcggcttcca gggcttctgc ggtagccgcg cggaacgggt cgaggtctct gcgcgtgccg
      661 ctcaagaaga tactgaactc cgactcaggc atgattgcag catggcgcac ctgcgagtgg
      721 gaggcaagaa aaggggccgc ccatcgctgg ttggccccga tgaatgtgct gctgattcag
      781 atgcatttcc ttcgaatgtg ctgctgattc agatgcattt ccttccggaa cagcgccgaa
      841 agcctgaggc ttcgctccat ctgcgctcgc ggcccagatc cctctggact tccgtggagg
      901 cgttggacag cgaccaggcc gtgcgctgtg taaactcctc gtacttcggc tcgatcagct
      961 tcggcaatcg tgacgccggc acgacgttcc ccttgatcgc ctcgaccatg atgtgatgtg
     1021 gcggcagctc acggaccttc atggtcccga tctcgcggtc gatccgctcc cccatcgagg
     1081 agacctgcga gagcattcgg tagatgaggt caggaaggtc gcggaagacg tgaaccgtgt
     1141 gcttgcggtg catcgtcacc tcgcccgaga aggcgaggtt ctagccgcgg cggtcggcgc
     1201 ttgtgctacg ctgcctatgg cgctggcagc cacgcgccgg gggttggggg gctagttcgg
     1261 gcgatgtctc ggtggcggcc cccagcgccc ttggacgacg cccccacttt gcgatgaagc
     1321 cgaacctaag caaatggaca gctcggaccg tcccccgcct tcccgatcgt ttcctatccg
     1381 gcgaggagcc attatcgcgg cggtggcgct aggtctggcg gcggccaccg gcggatacgt
     1441 catctcgcgg cagcagcgag cttcccggcc gctgattgtc tctgggcaga gccagagggc
     1501 gcgcaagatc gccagcctgc gtgcctacgc ggctcgagga gagctgggct cgctcgttcc
     1561 gcagacggac gcgatactcg cgattcgcga ggagttcctc cagagggtga tcgatcggtc
     1621 tctgccgctt cgccagtact tccaaaacgg ccgttacgtc gcgcgcctgg acagtgccgc
     1681 cgtgcggctc gattcggggc ttgccctgat cactctcgct ggccggggca tgctggccgg
     1741 ccaagaagac tctccactct acgcggatct tctcctgcaa gggctcatga ccataaccgg
     1801 cgtggacccc gatagcggga cgctgcaggc cagcttggtc atcaccgacg tgagcgcccg
     1861 gcgcgcccgc ccgcaagatc tccagtccct gctgaacccc gtcgccggtt acttcggcca
     1921 cctcagggcg gaagactgga atcggaaccg ccagagagta catctgccgc ttcgcgtcga
     1981 ccgcgagttc gtcctcccag cgatcgatgg cgacgtgacc gtccccgaga gccgcattcc
     2041 gatttccgtt cgcgtttccg cggtaaccac cctcagcgga cgcatggcgg tg
//
LOCUS       DASYRV010000136         6083 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_883206, whole genome shotgun sequence.
ACCESSION   DASYRV010000136 DASYRV010000000
VERSION     DASYRV010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6083
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_883206"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(177..1166)
                     /locus_tag="VGQ24_03370"
     CDS             complement(177..1166)
                     /locus_tag="VGQ24_03370"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HEV8453904.1"
                     /translation="MPAVLAFAETRAGELRKVALETVTAARQAAGSSGGGEVHAMLIG
                     PPGVAARAEALGRHGADVVFVIEQPTLARYNPEAFAATVAERLRSGDYRAGFFSASAQ
                     GRDLAPRVAAKLDVSLASDVTGFEVQGDSVTARHPAYTGKVVVTLRLTGTPALLSLRP
                     GSITPAEQPRQARVETVNPAMDPAAARVVVTEFSQRASTRLDLGEASIIVSGGRGLRA
                     AENFKLVEDLAEAIGNAAVGATRAVTDDGWRPATDQIGQTGRLVSPDLYIAVGISGAI
                     QHLAGMRTAKTIVAINKDKDAPIFKIADYGIVGDLFEIVPRLTEEIRKARKEH"
     gene            complement(1166..1918)
                     /locus_tag="VGQ24_03375"
     CDS             complement(1166..1918)
                     /locus_tag="VGQ24_03375"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HEV8453905.1"
                     /translation="MKIAVCIKRVPDMEMRFAIAGDRKSLDQAGLKYEMGDFDGYALE
                     VGLQLVEKRGTGEVVILSVGPDGVQETLRKGLAMGAARAVQLKAEEVPFDGLAIARAL
                     AAELKDGAYDLILFGRVATDTANGAVGPMTAELLNLPCVTAISQLEIADGRGTARRDL
                     EGASETVQFPLPAVLTIDEGIARPRLASLKGIMAAKKKPLEVKPAQLGAARLVVESMA
                     LPPDRPPGRIVGEGADAVPELLRLLQTEAKVL"
     gene            complement(2040..2939)
                     /locus_tag="VGQ24_03380"
     CDS             complement(2040..2939)
                     /locus_tag="VGQ24_03380"
                     /inference="COORDINATES: protein motif:HMM:NF017373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453906.1"
                     /translation="MQATVAVPVQDTGDAFRASLAGALNTFLSAIPRIIGFAVVLIIG
                     WIISSLLARGVEALLHAVRFNDLARRSGFADFVQKMGVRDDSAGVIASIAKWCVRLIT
                     LVVAFDTLGLPAVSNVLNQLLLWLPNLIVALVVLVIGGLAANALSRLVRGATAEAGFS
                     NPEMMETVTRVAVWGFAIVVAITQLGIATTLINTILIGLIGGTALAFGLAFGLGGRDR
                     AAQILGTIGRNAQRAGPKLERAANAAREGAQTMPQQTSIGSHQSPGSMADGSWAERSQ
                     SDRRRVQRPGLRDRRGGNGSSGS"
     gene            complement(3018..5189)
                     /locus_tag="VGQ24_03385"
     CDS             complement(3018..5189)
                     /locus_tag="VGQ24_03385"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEV8453907.1"
                     /translation="MLSLRAALISILVLALLPLLARAQEPDSTRRDTTRVTTLETIEV
                     TGSIAPTAGPGIGSGVPARISTVTGEAIDAWEPRLLADALATQTGISLYDDLGSPFKL
                     NLTTRGFNVGPVVGLPPGVSVFLDGVRQNEPDAAEVNFDLLPMEHVQRVELLSGSGSL
                     LGPNSLGGAVNLITRRGNGPLAAEAELSGGSYGSYSAEASVGGRTARGLDYYLAGGYE
                     NEDGWRQATGAENLNGFINLGRRGPERGISFQAFGAESRAETAGSLPESIFDVAPRTN
                     FTVGDFEDLNQLQGSVSGYAPIGRSRASFTTYVRRTHAERFNVNQAPDNNVRSFTTNK
                     TAGGNLDWRLTMPRPNGSLSVRLGADGAVNRVHIQLLEEDPVVPSNQTLTTDVRSPSY
                     DVAGYALADLKISDVTFSGGFRYDYIHIPFEDQLDPAADTANSFNRLSPRGGVSLDVA
                     PGASVYASVGQSFRAPAILELACADETAACPLPFALGDDPPLDPVVGTTFEVGGQVVR
                     GPAILNGSVYRTNVRDDIFFIQSENAVFEGFFDNIGNTRREGIELGVQVLPTERLSLY
                     ANYAFTRATFRSAAEIFSIRADSAFVASPLAGENNVAPGDRLPLVPEHQVKAGGLLLL
                     PVGLQFGVDARYTGRQWLRGDEANETRPLGGYFLANLRAGFSRAGWEISAVVSNLFDS
                     HRPMFGTFNENRQSGVLERFLTPINGRSFKLIVRRGFGADR"
     gene            complement(5189..5572)
                     /locus_tag="VGQ24_03390"
     CDS             complement(5189..5572)
                     /locus_tag="VGQ24_03390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453908.1"
                     /translation="MLTGLAAAAWIAFFVPEGPVTIDRCCYDLDGGGAPDDGVQVVAQ
                     RDGRVYRLSIYEDRDRSGNHTTQDIIRLDRTGRPLLEEVTPAGLTTIRRCCQDLDGDG
                     IPDDGIVVSGWPPDRVVTAAIYELR"
     gene            complement(5764..>6083)
                     /locus_tag="VGQ24_03395"
     CDS             complement(5764..>6083)
                     /locus_tag="VGQ24_03395"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEV8453909.1"
                     /translation="FRIAQNALRDHQRQSRRRPVVPIGSFRDLKCEAPSPEERVLWEE
                     QVGRLLTAMAELSSNDRQIITLCYGAELPVTEAGELLGLNATAARTRLWRALGRLRKV
                     LVQ"
BASE COUNT         1091 a         1990 c         1984 g         1018 t
ORIGIN      
        1 gagtcgaatt caggcgatgg taagtgagct gcgctgatta ataaaaagca atcacgaaaa
       61 cacgaaagaa ggaaaacacg aaaacagcaa cacaaaagta ataatggctc ccgcttcgtg
      121 ctttcgtctt ttcgtgcttt cgtgattgct tttctcttgt cgaaccagac gcaggtttag
      181 tgttccttac gggccttacg aatctcctcg gtcaatcgcg ggacgatctc gaacagatct
      241 cccacgatcc cgtaatccgc gatcttgaag atcggggcat ccttgtcctt gttgatcgcc
      301 acgatcgtct tggcggtgcg catgccggcc agatgctgga tggcacctga gatccccacg
      361 gcgatgtaga gatcagggct gacgagccgt ccggtctgcc ctatctgatc cgtcgccggc
      421 cgccagccgt cgtcggtgac ggcccgagtg gcgccgaccg ccgcattgcc gatcgcctcg
      481 gccagatcct ccaccagctt gaagttttcc gctgcccgga gcccacgccc gccgctgacg
      541 atgatggagg cctcacccag atcgagtctg gtcgaagcgc gttgagagaa ctcggtgacg
      601 actacccggg cggcggccgg gtccattgcc ggattcactg tttccactcg cgcttgccgg
      661 ggctgctccg ccggggtaat cgacccgggg cgaagtgaga gcagcgccgg ggtaccggtc
      721 aggcgcaggg tcaccacgac ctttccggta taggcgggat gccgggcggt caccgagtcg
      781 ccctggactt cgaacccggt gacgtcggac gccaggctca cgtccagctt agccgccacc
      841 cggggtgcga ggtcccgtcc ctgggccgag gcggagaaga agccggcgcg gtaatcgccg
      901 gagcgaagcc gttccgcgac agtggcggcg aacgcctccg gattgtagcg cgccagcgtc
      961 ggctgctcga tgacgaagac gacatcggcg ccgtgacgcc cgagcgcttc ggcccgcgca
     1021 gcgacaccgg gcgggccgat gagcatggca tgcacctctc cgccgcctga cgagcccgct
     1081 gcctgtcgtg cggcagtgac ggtctcgagc gccaccttcc ggagctctcc tgctcgagtt
     1141 tcggcaaatg ccaggaccgc cggcatcaca ggaccttcgc ctcggtctga agcagacgga
     1201 ggagctcggg aactgcatca gcgccttcgc cgacaatgcg cccgggcggg cggtcaggcg
     1261 gaagtgccat cgactccact accaggcgtg cggcgccgag ctgggccggc tttacctcca
     1321 aaggcttctt cttcgccgcc atgattccct tgagcgaggc caggcgcggc cgggcgatgc
     1381 cctcgtcgat cgtgagcacg gccggtaggg ggaactggac tgtttccgac gccccctcga
     1441 ggtccctccg ggcggtaccc cggccatcgg caatttcaag ctgagagatt gcggtaacgc
     1501 agggaagatt cagcagctcc gccgtcatcg ggcccaccgc accattggcc gtatccgttg
     1561 ccacccggcc gaagaggatc aggtcgtagg cgccgtcctt gagctcggcg gcgagtgccc
     1621 gcgcgatggc cagcccgtcg aaggggacct cctcggcctt gagctgcacc gcgcgcgcgg
     1681 cacccatcgc gagacccttg cggagcgtct cctgtactcc atcgggcccg acggaaagaa
     1741 tgacgacctc cccggttccc cgcttttcca ccagctggag ccccacttcc agggcatagc
     1801 cgtcgaagtc acccatctcg tacttgagac cggcctggtc cagggatttg cgatctcccg
     1861 caatcgcgaa ccgcatctcc atgtccggca ctcgtttgat gcacacggca atcttcaacg
     1921 cgcgctccgg atgttcgatg agtcatcaac ccggggcaaa gctagcggcc cggaagatag
     1981 gaacgcaacg aggccaccgc agaacggtgg cctcgcgcga tgtcgcgtct tgctgccgat
     2041 caggaaccgc tggagccgtt tcctcctcgc cgatccctca gccccggccg ctggacccgg
     2101 cgccgatcgc tctgcgaccg ctccgcccag gaaccgtcag ccatagagcc aggagattgg
     2161 tgcgacccga ttgaggtttg ctgtggcatg gtctgggcgc cttcgcgggc ggcattggcc
     2221 gcgcgctcca gtttgggacc ggcccgctgc gcgttccggc cgatcgtgcc gagaatctgg
     2281 gcggcacgat cccggccacc gagcccgaac gcgaggccga aggccagcgc cgttccgccg
     2341 ataaggccga tgaggatggt gttgatcagg gtcgtggcga tgccgagctg ggtaatggcg
     2401 accacgatgg caaagcccca caccgcgact ctcgtcaccg tctccatcat ctcgggattg
     2461 ctgaagccgg cttccgcggt cgcgccgcgg accagccggg agagcgcgtt ggccgcgagg
     2521 ccaccgatga ccagcaccac cagggcgacg atcagattgg gcaaccaaag caggagctga
     2581 ttgagcacgt tggacacggc cggtagcccc agcgtgtcga aggccacgac cagcgtgatg
     2641 aggcggacac accatttggc gatgctggca atgacgccgg ccgaatcgtc gcggaccccc
     2701 atcttctgca cgaaatcggc gaacccggaa cggcgcgcca ggtcgttgaa cctcaccgca
     2761 tgcagcaagg cctcgacccc gcgagcgagc agcgaggaga tgatccaccc gataatgagg
     2821 acgacggcaa agccgatgat tcttggaatg gccgagagga aggtgttgag cgcgccggcc
     2881 agagaggccc tgaacgcgtc tccggtgtcc tgcaccggta ccgcgacggt agcctgcata
     2941 ttgcctccac tactgttaag tcatggttgg cccccgaaca gaatggcggt gagggaacag
     3001 gttgaccgtg acgacggtca ccgatcggcc ccgaatccgc ggcgaacgat cagcttgaac
     3061 gaacggccgt tgattggggt aagaaaacgc tccagcactc cgctctgtct gttctcgtta
     3121 aacgtcccga acatcggccg gtgggagtcg aacaggttcg agacgacggc cgagatctcc
     3181 cagccggccc ggctgaagcc ggcccggaga ttggccagga agtatcctcc gagcggccgg
     3241 gtctcgttcg cctcgtcccc ccggagccac tgccgtccgg tgtacctggc gtccaccccg
     3301 aactggagcc ccactggcag taggagcaga ccaccggcct tcacctggtg ctccggcacc
     3361 agcggtaggc gatccccggg ggcgacattg ttctcgccgg ccagcggaga agccacgaag
     3421 gcggagtctg cccggatgct gaagatctcg gccgcgcttc ggaaggtggc tcgagtaaag
     3481 gcgtagttgg cgtagagtga gagccgctcg gtcggcagta cttgaacgcc gagctcgatg
     3541 ccctcccgcc gggtattgcc gatgttgtcg aaaaagccct cgaagactgc attctccgat
     3601 tgaatgaaga agatgtcgtc gcggacgttg gtgcggtaca ccgagccatt caagatggcg
     3661 ggcccgcgta ccacctggcc gccaacttcg aacgtggtcc ccaccaccgg gtcgagtggc
     3721 ggatcgtcgc ccagggcaaa gggcagggga caggctgccg tctcgtccgc gcaggccagc
     3781 tccaggatgg caggtgcgcg gaagctctgc cctaccgatg catacaccga cgcgccgggc
     3841 gcaacatcca gactcacacc gccgcggggg ctgagccggt tgaagctgtt cgccgtgtcg
     3901 gctgcggggt ccagctggtc ttcgaatggg atatggatat agtcgtagcg gaagccgccg
     3961 gagaaggtca catccgatat cttgaggtcg gccaaggcat aacccgcgac gtcgtaactc
     4021 gggctccgga cgtcagtcgt cagagtctgg ttggaaggga caacgggatc ttcctcgagc
     4081 agctgaatgt ggacccggtt gaccgcgcca tccgccccga gccggacgga gaggctgccg
     4141 ttggggcgcg gcattgtcaa gcgccaatcg aggttccccc cggccgtctt gttggtagtg
     4201 aaggagcgaa cgttgttgtc cggggcctgg ttgacgttga accgttcggc gtgggtccgg
     4261 cgcacgtagg tcgtaaagga ggcccggctc cggccgatcg gggcataccc cgatacggaa
     4321 ccctgtagct ggttgaggtc ctcgaagtcg ccgactgtga agttcgtccg cggggcaacg
     4381 tcgaagatgc tctccgggag cgatccggcg gtctcggccc tcgactcggc gccgaatgcc
     4441 tgaaagctga ttccccgctc cgggcctcga cggcccaggt taatgaaacc gttcaggttc
     4501 tccgccccgg tagcctggcg ccagccgtcc tcgttctcgt agccacccgc caggtagtaa
     4561 tccagccccc gtgcggtgcg cccgccgacc gatgcctctg ccgagtacga tccgtacgat
     4621 ccgccggaca gctcggcttc cgccgcaagc gggccgtttc cccgtcgggt gatgagattc
     4681 accgcgccgc cgagcgagtt ggggccgagc agggaaccgg agccgctgag gagctcgacg
     4741 cgctggacat gctccatcgg cagcaggtcg aagttcacct ccgccgcgtc cggctcgttc
     4801 tggcgaaccc catcgaggaa gaccgataca ccgggtggga gaccgacgac ggggccgaca
     4861 ttgaagccgc gggtggtcag gttcagcttg aacggactgc cgaggtcatc gtatagggag
     4921 atcccggtct gggtggcgag cgcgtcggcg aggagccgtg gctcccaggc gtctatggct
     4981 tcaccggtga ccgttgagat ccgtgccggc acccccgatc cgatgccggg ccctgccgtc
     5041 ggcgcgatcg agcccgtcac ctcgatggtc tcgagggtgg tgacccgggt cgtgtcccgg
     5101 cgggtgctat ccggctcctg agcccgagcg aggagcggca gcagggcaag aacgagaatt
     5161 gaaatcaggg ctgcccgaag actgagcatc agcgcaactc gtagatggca gcggtaacca
     5221 cgcggtcggg aggccacccg ctgacgacga tgccgtcgtc cggaatgcca tccccatcga
     5281 gatcctggca acaccgtcgg atggtggtca gtccagccgg agtgacttcc tcaagcaggg
     5341 ggcggccggt tcggtccagc cggatgatgt cctgcgtggt gtgattgccg gaccggtcgc
     5401 ggtcttcgta gatcgaaagg cggtaaaccc tgccgtcccg ctgggccacg acctgcacgc
     5461 cgtcgtccgg cgcaccgccg ccgtccagat cgtaacagca gcggtcgatc gttaccggcc
     5521 cctcgggcac gaaaaaggcg atccaggcgg cagcagcaag cccggtcagc accaatgatc
     5581 cttgccacag gcggcggcgc cagggagtgc tcggccccgg gggtaattgt tccccccggc
     5641 gtatccgccc caagagctcg ggctcgagtg aagcccgggg ctcgaaccga attccgcgga
     5701 gcaagccgtc tagctccctg acctcgaccg gtggcttctc gcccggcatg cggggatcag
     5761 ggatcattgc accagcacct tccgcagccg cccgagagcc ctccacagac gagtccgtgc
     5821 ggcggtggcg ttcaggccca gcagctcccc cgcctcggtg acaggcagct cagcgccgta
     5881 gcacagcgtg atgatctgcc gatcgttcga agacagctcg gccatcgcgg tgagcaatct
     5941 gcctacttgc tcctcccaca gtacccgctc ctcgggtgaa ggggcctcgc atttcaggtc
     6001 gcggaagctc ccgatcggca caaccggccg gcgacgtgac tgtcgctgat gatctcgcaa
     6061 agcattctgg gcgatacgga aga
//
LOCUS       DASYRV010000137         6041 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1504807, whole genome shotgun sequence.
ACCESSION   DASYRV010000137 DASYRV010000000
VERSION     DASYRV010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6041
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1504807"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..288)
                     /locus_tag="VGQ24_03400"
     CDS             complement(<1..288)
                     /locus_tag="VGQ24_03400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8453910.1"
                     /translation="MTHRILVVDDEPDITALVAYHLAKAGFRVSTAANGPDALKAARE
                     ERPDIVILDLMLPGISGYDVLAEMRKREETREVGVILLTARREETDRIRGLS"
     gene            complement(285..683)
                     /locus_tag="VGQ24_03405"
     CDS             complement(285..683)
                     /locus_tag="VGQ24_03405"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEV8453911.1"
                     /translation="MTTSTATDLLLTVAEPTRLRILNCLAAAPLFVSDLQAVLDLPQP
                     TVSRHLQILRRAQLVRDTPIAQFVLYRLQRNGTGHGRMVSAILDAVVQDDRDMRDERH
                     RAVDRSRSHTRLRVQEPTNGKLAPRPKRPS"
     gene            770..3868
                     /locus_tag="VGQ24_03410"
     CDS             770..3868
                     /locus_tag="VGQ24_03410"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /protein_id="HEV8453912.1"
                     /translation="MLLLLAALALAAPAQDTAHVVLVATTDVHGHATEWDYARRQPFA
                     GGLARVATVVDSLRADYPGEVVVMDAGDLLQGDAFATYFARVKPHDPHPLIEAMNLTG
                     YDVATPGNHEFDWGLGPMRQAITGAAFPYVSGNIYTLAGDTLLYPPYVVLQRQGVRIG
                     VAGFTTPGALVWDRVQLQGKVRIDRIPAAASRVMEAMRRETDVAVALVHSGMDGPASY
                     DTTGIGGEHAAASLATLLVRPDVVVVGHSHREMRDSVIGGVHFVQPRPFGGGVSIIHL
                     DLTRQDDRWRLTRVRSELISTARVAPSARVTQRLARAHAAVLSWVETPLGTATGSMRA
                     HAARVEPTPILGFVNAVQRMRTGADLSAASAFDLEAGFDSGSIRLGQVVALYPYDNTL
                     RAVRVTGAQLKAYLEHSARYFRADPVDRISINDSVPGYNYDVIAGARYEIDLRRRVGD
                     RIRNLAVGGRRVRPADRFTLALNSYRQTGAGGYTMLRDAPVVYDKGENIRDLLIEEIR
                     SRGEIDPADYAGRDWRIVPQATAAAVRALFRVPDKPLPAGARDTIILRVLATADLHGG
                     LLPKAGPDGKPAGGVAALAALMDSLAADCDCPTLRLDAGDAMQGTVVSNVTRGRAMVE
                     VLNRLNLTAGALGEHDFEWSLDTLRRRISEARYPWLAANVFDSASGRRPDWIAPYRMV
                     PAGSLKVAVVGYITSDAKTSVKPELTGGLRFGDGALAIHDVLAEVRSQRPDLTILLAH
                     AGASCDGPVCTGEAIRIAEGAESRTIDLLVAGHSHQVVNTRVAGVPIVEAGSDGAALA
                     IADLVKTVAGGREVRTRVAPVIPDSVTANAAMVALVETYRRKADSLTSRVVAAVKLPL
                     ARSDGQSRLGSLIAEARRNVLRTDVGLVGNAGIRADLPAGPVTYGQLFEIQPSQNRLV
                     RLTLSGARLREVLEHAIDRGGRPTAHVAGVKVRFDPRARKRRIQSVELLGDRKLRADA
                     TYTLAVDDFLSGGGDGYTMLVGLPAEPAGMLDIEGLITYLRRLPQPVTFQDEAGFRST
                     RR"
     gene            3865..4104
                     /locus_tag="VGQ24_03415"
     CDS             3865..4104
                     /locus_tag="VGQ24_03415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453913.1"
                     /translation="MNDAIRVFVNAGVMDLPAGAIVADAVRAADPSLLDKIAAGAAYV
                     TDGRGIEIDPSTPLVSGAILRVVVRARPRSADADA"
     gene            4091..5113
                     /gene="add"
                     /locus_tag="VGQ24_03420"
     CDS             4091..5113
                     /gene="add"
                     /locus_tag="VGQ24_03420"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: protein motif:HMM:NF013155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004000 - adenosine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0043101 - purine-containing compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HEV8453914.1"
                     /translation="MLTREVVGRLPKAELHVHLDGSLRPETMIALARQARISLPSTDP
                     DVLRRFMRVDDAANLEDYLRRFDVTIPLLQTPEAVERVAYEMAEDAARDNVRYLEVRY
                     CPHLSRTRGMTLDDVIQAELGGFQRGERDFGVVSRVINCSLRHYDPAISVRIAERSVA
                     FRDRGVVAFDLAGGEAGRPADEHKAAFDLAAEGNLGITVHAGEAAGAESVATAVHQCH
                     ADRIGHGTRLYESPQLRDYIRDRRILIEANITSNVQTRAVRRASEHPVRGYFDAGLNV
                     TLCTDGWLMAGVSLSDEYWLAHTDLGFSREEIDQLILNGFAGAFLPWPERLEFLSRVR
                     DELAGI"
     gene            5175..>6041
                     /locus_tag="VGQ24_03425"
     CDS             5175..>6041
                     /locus_tag="VGQ24_03425"
                     /inference="COORDINATES: protein motif:HMM:NF019292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+ dependent nucleoside transporter N-terminal
                     domain-containing protein"
                     /protein_id="HEV8453915.1"
                     /translation="MRVTILAVLLFGGAMFAAWVVPGLTWQGVNGVLAQGAPGGQTDS
                     HTVTAPQEPASPPASEPPGLLFRLRGLVGILAILAIAIALSHNRKRIRWRVVAWGLGL
                     QLLFAIFVLRIPAGQQLFRALGSFVTSILNYSYVGSQFVFGELGKPNSSLGVIFAFQL
                     LPAIIFVSALFAIMYYLGIMQLIVRAFAILMSRVMGASGAESLNVAASIFMGQTEAPL
                     TIRPFLPRMTRSELMTVMTSGMAHISGSIMVAYIAFGIEARHLLTAVIMTAPGTIMMA
                     KLFEPETEVPETY"
BASE COUNT          939 a         1988 c         2058 g         1056 t
ORIGIN      
        1 cgagagcccc cggattcggt cggtctcctc ccgtcgggcg gtcaggagta tgaccccgac
       61 ctcgcgggtc tcttcccgct tccgcatttc ggcgagcacg tcataacccg aaatgcccgg
      121 gagcatgaga tcgagaatga cgatgtcggg acgctcctcc cgtgctgcct tcagggcgtc
      181 gggcccgttg gccgcggtgg ataccctgaa tcccgccttg gccaggtgat acgcgacaag
      241 tgcggtgatg tcgggctcat cgtccacgac gagaatccgg tgcgtcatga cggcctcttc
      301 ggtcggggcg cgagcttccc gttggtcggc tcctgcactc ggaggcgggt atgggagcgg
      361 ctccggtcca ccgcgcggtg gcgctcgtct cgcatgtctc tgtcgtcctg caccacggca
      421 tcgagaatgg cggacaccat gcgcccgtga ccggtgccgt tgcgctggag ccggtacagg
      481 acgaactgcg cgatcggggt atcccggacc agctgggcgc ggcgcaggat ctggaggtgg
      541 cgagagaccg tcggctgggg caggtccagc actgcctgga gatcggagac aaacagcggc
      601 gcggcggcca ggcagttcag gatccgaagc cgggtcggtt cggcgaccgt gagcaggagg
      661 tcggtagcgg tcgaggtagt catattcgcc gcgacgaata taccgccagg tggatatagg
      721 ggaagagagc ccttcccgcc ccttccacct ctgtctttat tacgccccga tgctcctgct
      781 tctcgctgcg ctggctctcg ccgcgccggc ccaggacacg gcgcacgtcg tgctcgtggc
      841 caccaccgac gttcacggtc acgccaccga gtgggattac gcccgccggc aaccattcgc
      901 cggtggattg gcgcgggtcg ccaccgtcgt ggattcgctc agggcggact atccgggaga
      961 ggtcgtggtg atggatgccg gcgacctgct gcaaggcgac gcgttcgcca cctacttcgc
     1021 ccgggtcaag ccgcacgatc ctcatccact gatcgaggcg atgaacctca ccggctacga
     1081 cgtggccacg ccggggaatc acgaattcga ctggggtctc ggtccgatgc ggcaggccat
     1141 caccggcgcc gcattcccct acgtcagcgg caacatctac accctggcgg gcgacacgct
     1201 gctctatccc ccctatgtgg tgctgcagcg ccagggcgtt cggatcggtg tggccggctt
     1261 caccacgcct ggcgccctgg tgtgggaccg ggtgcagctg cagggcaagg tgcggatcga
     1321 ccggatcccg gccgcggcat cgagagtgat ggaagcgatg cgtcgcgaga ccgatgtggc
     1381 ggtggcgctg gtgcatagcg ggatggacgg tcccgcctcg tacgatacca ccggcattgg
     1441 gggcgagcat gccgcggcgt ccctggcgac gttgctggtt cgccccgatg tggtggtggt
     1501 aggccactcg catcgggaga tgcgggattc ggtgatcggt ggagtgcact tcgtgcagcc
     1561 gagacccttc ggcggcggcg tctccatcat ccacctcgac ctgaccagac aggatgatcg
     1621 gtggcggctg acgcgggtgc ggagcgagct catctccacc gcgcgggtgg ccccatccgc
     1681 tcgggtgacc cagcgactgg cacgggcgca cgcggccgtg ctgagctggg tcgaaacacc
     1741 tcttggtacg gctaccggtt ccatgcgggc ccacgccgcc cgggtggagc cgaccccgat
     1801 tctcggcttc gtcaatgccg tgcagcggat gcggaccggg gccgatctct cagccgcatc
     1861 ggccttcgat ctcgaggccg ggttcgacag cgggtcgatc cgcctggggc aggtcgtggc
     1921 gctgtacccc tatgacaata cgctgcgagc ggtgcgggtg accggcgcgc agctgaaggc
     1981 ctacctggag cacagcgctc ggtacttccg ggccgatccc gtcgaccgca tctcgatcaa
     2041 tgacagcgtg ccgggctata actacgacgt aatcgcgggc gcacgctacg agatcgacct
     2101 acggcggcga gtgggcgacc gaatccggaa tctggccgtc ggaggacgcc gggtgcgacc
     2161 ggccgaccgc ttcacgcttg cgctcaacag ctatcgccag accggcgccg gcggctatac
     2221 catgctgcgg gatgccccgg tggtctacga caagggcgag aacatccgcg atcttctgat
     2281 cgaggagatc cggagccggg gcgagatcga ccccgccgat tatgccgggc gcgactggcg
     2341 aatcgtcccc caggccaccg ccgccgccgt gcgcgccctg ttccgagtgc cggataagcc
     2401 gctccccgca ggcgctcggg acaccatcat cctgcgggtg ctggcgaccg ccgatctcca
     2461 tggtggcctg ctgccgaagg ccggccccga cgggaagcct gcgggtggcg ttgccgcgct
     2521 cgcggcactg atggatagcc tggccgccga ctgcgattgt cccacgctgc ggctcgacgc
     2581 gggcgacgcg atgcagggta ccgtcgtctc caacgtcact cggggtcgcg cgatggttga
     2641 ggtgctcaac cgtctcaacc tgacggcggg cgcgctcggg gagcacgatt tcgagtggtc
     2701 gctcgacacc ctgcggcgcc ggatcagcga ggcccgctac ccctggctgg cggccaacgt
     2761 cttcgactcg gcgagcggcc gccggcctga ttggatcgct ccgtatcgca tggtgccggc
     2821 gggtagcctc aaggtggcgg tcgtgggcta cattacgtcc gatgccaaga ccagcgtgaa
     2881 gccggaactg accggtgggc ttcgattcgg cgacggcgcg ctcgccatcc atgacgtgct
     2941 cgcggaggtc cgctctcaac ggcccgatct taccatcctg ctcgcccacg ccggcgcatc
     3001 ctgcgatggt cccgtgtgca ccggcgaggc gatccggatc gctgaaggcg ccgagtcgcg
     3061 aaccatcgat ctgctggtgg cagggcacag tcaccaggtg gtcaacacgc gggtggccgg
     3121 cgttcccatt gtcgaagcag gcagcgatgg ggccgcgctt gccatcgcgg acctggtgaa
     3181 aaccgttgcg ggtggacggg aagtaaggac gcgtgtcgcg ccggtgatcc cggactcggt
     3241 gacggccaat gccgcgatgg tcgcactggt cgagacctat cgccgcaagg ccgactccct
     3301 caccagccgg gtggtggccg cggtcaagct gccgctggct cgctcggatg gccagtcccg
     3361 gctcggcagc ctcattgccg aagcccggcg caacgtactg cgcaccgacg tgggtctcgt
     3421 cggcaacgcg gggatccggg cagatctgcc ggccggaccg gtcacctacg gccagctctt
     3481 cgagatccag ccatcgcaaa acaggttggt ccggttgacg ctgtcgggcg cgcggctccg
     3541 ggaggtgctg gagcacgcca tcgatcgtgg agggcggccc accgcgcacg tggcaggggt
     3601 gaaggtgcgt ttcgacccgc gtgcgcgcaa acgccggatc caaagcgtgg agctgctggg
     3661 ggatcgaaag ctgcgggccg atgcaacgta tacccttgcc gttgacgatt ttctctctgg
     3721 cggcggggac gggtacacca tgctcgtcgg gcttcccgcc gagccggctg gcatgctcga
     3781 catcgagggt ctaatcacgt acctgcgacg tctgccgcag ccggtcacgt tccaggatga
     3841 ggctggcttc cgctccaccc gtcggtgaac gacgccatcc gggttttcgt caacgccggc
     3901 gtcatggatc tgccggccgg agccatcgtc gccgacgcgg tacgggcggc cgatccatct
     3961 ctgctcgaca agattgccgc cggagcggcg tacgtcaccg acggcagagg catcgagatc
     4021 gatccctcga cccccctggt gagcggcgcc atcctgcggg tcgtggtacg agccaggcct
     4081 cggagcgccg atgctgacgc gtgaggtggt gggtcggctc cccaaggccg agctccatgt
     4141 ccacctcgat gggtcgctca ggccggagac gatgatcgcg ctcgcgcgcc aggccaggat
     4201 ctccctcccc tcgactgatc ccgacgtatt gcgccgcttc atgcgggtgg acgacgccgc
     4261 caatctggag gattatctcc gccgcttcga cgtcaccatt ccgctgcttc agacgcccga
     4321 agcggtcgaa cgggtggcct acgaaatggc ggaggacgcg gcgcgcgaca acgtgcggta
     4381 tctggaagtg cgctactgtc cccacctgag ccggacccgg ggaatgacgc tcgacgatgt
     4441 catccaggcc gagctcgggg ggttccagcg tggggagcgg gacttcggcg tggtgtcgag
     4501 agtgatcaac tgttcgctcc ggcactacga tccggcaatc tcggtgagga tcgcggagcg
     4561 gtcggtcgcg ttccgggatc gtggcgtggt ggcgttcgac ctcgccggtg gggaggcggg
     4621 ccgtcccgcg gacgagcaca aggccgcatt cgatcttgcg gccgagggga atcttggtat
     4681 cacggtgcac gccggtgaag cggctggtgc ggagtcggtc gcgactgcgg tgcaccaatg
     4741 ccacgccgac cggatcggcc atggcacccg gctctacgag agcccgcagc tccgcgacta
     4801 cattcgggat cgccggatcc tgatcgaggc caacatcacc agcaacgtgc agacccgcgc
     4861 cgtccggcgc gcgtcggagc acccggtgcg gggctacttc gatgccgggc tcaacgtgac
     4921 gctctgtacc gatggttggc tgatggcggg tgtctcactc agtgacgagt actggctcgc
     4981 gcacaccgac ctcggctttt ctcgcgagga aatcgaccaa ctgattctga atgggttcgc
     5041 tggagccttt cttccctggc ccgagcggct cgagtttctg agccgggtgc gggacgagct
     5101 ggccgggatt tagtcgcgac ttctcgagaa gaggaccatt catgcgaaca cgctggtggc
     5161 cggcaagcag gaatgtgcgt gtcaccatct tggccgtgct cctcttcggc ggcgcgatgt
     5221 tcgcggcctg ggtggtcccc ggactcacct ggcaaggcgt caatggcgtg ctggcccagg
     5281 gcgcaccagg aggacagacc gactcgcaca cggtcacggc cccacaggag cccgcgtccc
     5341 cgcccgcatc cgagccacca ggattgttgt tccgcctcag gggccttgtc ggcatcctcg
     5401 ccatccttgc gatcgcgatc gccttgtccc acaaccggaa gcgaattcgc tggcgggtcg
     5461 tggcctgggg tctgggcctc cagctgctgt tcgccatctt cgtgctccgg attcccgccg
     5521 gccaacagct cttccgcgcg ctcggcagct tcgtgacctc catcctcaat tactcgtacg
     5581 tcggctcgca gttcgtcttc ggcgagctgg gcaaaccgaa ctcgagcctg ggagtcatct
     5641 tcgcctttca actcctgccc gccatcatct tcgtgagcgc gctcttcgcg atcatgtact
     5701 acctcgggat catgcagctc attgtccggg cgttcgccat actgatgagc cgggtgatgg
     5761 gagcgagcgg ggcggagagc ctgaacgtgg cggcctcgat cttcatgggc cagaccgagg
     5821 ctccgctcac gattcgaccg ttcctcccgc ggatgacccg ctccgagctg atgacggtga
     5881 tgacatcagg catggcccac atctccggat cgatcatggt ggcgtacatc gcattcggca
     5941 ttgaggcgcg gcatctcctg accgcggtca tcatgactgc gcccgggacg atcatgatgg
     6001 ccaagctctt cgagcccgaa accgaagtgc cggagaccta t
//
LOCUS       DASYRV010000138         1895 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_51422, whole genome shotgun sequence.
ACCESSION   DASYRV010000138 DASYRV010000000
VERSION     DASYRV010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1895
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51422"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(603..1157)
                     /locus_tag="VGQ24_03430"
     CDS             complement(603..1157)
                     /locus_tag="VGQ24_03430"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8453916.1"
                     /translation="MARATVLLVDNEPTMRALVRRRLEAEDFEVEEATDGESALALIQ
                     SRTEPFDLVLTDLSMPGINGRQIVETLARYRPSVAVLGMSAHPDGVPHVGPLDTPFRV
                     MLKPFTADDLYHAVRDVITRAADLTAIADHEIEVAHAGLSQLAKALQASRTMRVQTVD
                     LVVAARELRRLKLEGAASGRGRPE"
     gene            complement(1221..1493)
                     /locus_tag="VGQ24_03435"
     CDS             complement(1221..1493)
                     /locus_tag="VGQ24_03435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018287374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HEV8453917.1"
                     /translation="MTYVIAEPCIGVKDRSCVDVCPVDCIYEGEDQLYIEPDECIDCG
                     ACVPECPVTAIFTEEEVPPNWESYIAKNRDVFKSDQPPAKRTPEKK"
     gene            complement(1534..>1895)
                     /locus_tag="VGQ24_03440"
     CDS             complement(1534..>1895)
                     /locus_tag="VGQ24_03440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453918.1"
                     /translation="EHAMAEPTLHLPRELPPETRGYLAQRLDGARDLYLLALALGDRP
                     DGSVFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWVRVEQ
                     LLAERAAPKPAERRRLR"
BASE COUNT          344 a          633 c          558 g          360 t
ORIGIN      
        1 ttttgcatag tcaagggccg gcgatgtcga gggtgattcg agacggagac aaacgagtgc
       61 gacggctcgt cgtatacctc tcgatagagg acctccggaa ggacatgcga gctgcggagc
      121 tgggcctctc tgcggcagag gcggcatgat gcgcctggca tatcgaagct actttgttac
      181 cacggttgtc accgacctca cgccttcgct gtcaccagaa gccccgccga gtcgtaagct
      241 ctggcggggc atctatttca aatatgggcc tgggtagagt tgaactaccg acctcacgct
      301 tatcaggcgg cccacgtagg aaacgaattc cgacgccatt cctgtaactc actgacatcc
      361 cgcgcgatct gcccggattg cctgccgtgg ataccgtgat cccttgggat caatcgacac
      421 accaatcgac accaccgatc cttcatgcga cccccgaagg cccaccgcta agagagctaa
      481 ccaaccgcga caagatgtcc gacttgaggg gtaaccccac cgttggtccc ggacccttct
      541 cccccgatgg cgggaggcgt cagggcttgg gagcgcagcc attattaata atccaagccc
      601 ggttactccg gccttcccct accgctggct gccccctcca gcttgagccg gcgcagctcc
      661 cgggcagcga caactagatc caccgtttgt accctcattg tacgactcgc ttgtaatgct
      721 ttcgccagct gactcagtcc ggcatgggcc acctcgatct cgtggtcggc gatcgcggtg
      781 aggtcggcgg cgcgagtgat cacgtcccga accgcgtgat agagatcgtc ggccgtaaat
      841 ggcttgagca tcacccggaa gggtgtgtcc aatggaccaa cgtgcggcac gccatcggga
      901 tgggcggaca ttcccagcac agccacgctc gggcgatacc gggccagcgt ttccacaatc
      961 tgccgcccat tgattccagg catggagaga tcggtcagca ccagatcgaa cggttccgtg
     1021 cgcgactgaa tgagtgccag cgcggactcg ccgtccgtgg cctcctcgac ctcaaagtct
     1081 tcggcttcga gtctgcggcg gaccagcgcg cgcatcgtcg gttcgttgtc taccaggagc
     1141 acagtggcgc gcgccaaatc ggtccgtgcg gggctgcaac tcgatccatg cggccctcca
     1201 ggtacaccga atacccgccc ttacttcttc tcaggagttc tctttgctgg cggctggtcg
     1261 ctcttgaaca catcacggtt cttcgcgatg tacgactccc agttaggtgg gacctcctcc
     1321 tccgtgaaga tcgccgtgac cgggcactcg ggcacgcacg ccccgcagtc gatgcactcg
     1381 tcgggctcga tgtagagctg gtcttcgccc tcgtagatgc agtccaccgg acacacgtcc
     1441 acacacgacc ggtctttaac gccaatacag ggttcggcga tcacgtacgt cataggttgc
     1501 tcctctgggg tacccctggc cagcaggcac ccttcagcgc agtctccgcc gctccgctgg
     1561 tttgggggcg gctcgctcgg cgaggagctg ctcgacgcgc acccacagct caggccggat
     1621 gctgtcggcc aactcgatgt tcaacttgcc gagcatcacg gcgatggccc ccgtgtcgag
     1681 cccggcgatc cgcgcctcct cgatcaccgc cgcgaagtgg atgcgggcct cacggatcat
     1741 ccgcccgaac acggacccgt cagggcggtc gcccagggcc agcgccagga gatagagatc
     1801 gcgcgcgccg tccagccgct gcgctaagta gccccgggtc tcgggcggca gttccctcgg
     1861 caggtgaagt gtcggctcag ccatggcgtg ctcct
//
LOCUS       DASYRV010000139         1600 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1505094, whole genome shotgun sequence.
ACCESSION   DASYRV010000139 DASYRV010000000
VERSION     DASYRV010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1505094"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..790
                     /locus_tag="VGQ24_03445"
     CDS             <1..790
                     /locus_tag="VGQ24_03445"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEV8453919.1"
                     /translation="VEICEGLNTPDGGEVLVLGRRWGHNDRELRQRLGISLQETQFSE
                     KLTVDETVQLFRSFYDRGPLPADVIAMVQLQEKARSRVGGLSGGQKQRLALACALVGD
                     PELLFLDEPTTGLDPQSRRQLWELIERFKSDGRSILLTTHYMDEAERLCDRVAIVDHG
                     RMIALGTPPALIARLEAEHVVEFALAESSVIDESSLRGIDGVCAAERRNGTYRLQVSE
                     LHRVMPSLLGELRRQGAQLAELRTHSATLEDVFVSLTGRHLRDE"
     gene            783..>1600
                     /locus_tag="VGQ24_03450"
     CDS             783..>1600
                     /locus_tag="VGQ24_03450"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8453920.1"
                     /translation="MSEPGRGWTGHPLVQLTRVRYREFFREPEAVFWVFIFPVLLAAG
                     LGIAFRNRAADRTSVAVVATGPQAPRLVDAMRRADGLDVSLLTDSAASEALRIGNVAM
                     VVVPSASGQVEYLYDDSRPESRTARLLVDEVLQRAAGRRDPLMVRDQLVRERGARYID
                     FLVPGLLGMNLMGSGIWGLGFAIVDARKKRLLKRLIATPMSRAQYLASFVLSRLTLLV
                     IEVGLLLGFGVLVFGVPLRGSLPLLVTICLVSSLAFASLGLLIASRAQTMEGASG"
BASE COUNT          228 a          523 c          543 g          306 t
ORIGIN      
        1 cgtcgagatc tgcgaggggc tcaacacacc cgatggcggc gaggtgctgg tgctcggccg
       61 ccgctggggc cacaacgacc gcgagctgcg gcagcggctt ggcatctccc ttcaggagac
      121 tcagttctcg gaaaagctca ccgtagatga gacggtgcaa ctcttccgca gcttctacga
      181 tcggggtccc ttgccggccg atgtcatcgc catggtccag ctacaggaga aggcccgatc
      241 ccgcgtgggc ggcctttccg gcgggcagaa gcaacgcctc gccctggcct gtgcgttggt
      301 aggagatccg gagctgctct tcctcgatga gccgactacc ggactcgacc cacagtctcg
      361 ccgtcagctc tgggagctga tcgagcggtt caagtccgat ggccgctcca ttctcctcac
      421 cacccactat atggatgaag ccgagcggct ctgcgaccgg gtcgcgatcg tggaccacgg
      481 ccggatgatc gcgctcggta ctcctccggc gcttatcgcc cggctcgagg ccgagcacgt
      541 agtcgagttc gccctggcgg agtcctccgt catcgatgag agctcactcc gcgggatcga
      601 tggggtgtgc gccgccgagc gccggaacgg gacttaccgg ctccaggttt cggagctgca
      661 ccgggtcatg ccttcgctcc ttggcgagct gcgccgccag ggtgcccagc tggccgagct
      721 ccggacccac tcggccacgc tggaggacgt gttcgtgtcg ctcaccggac gacatctgcg
      781 cgatgagtga gccgggtcgc ggctggaccg gccacccgct ggtacagctc acgcgggtac
      841 ggtaccggga gttctttcga gagcccgaag cggtgttctg ggttttcatc ttcccggtcc
      901 tgctcgctgc gggactcggc attgcctttc ggaaccgtgc cgcagaccgc accagcgtgg
      961 cagtggtggc caccggcccc caggcgcccc ggctggtcga tgccatgcgc cgggccgacg
     1021 gcctggatgt gtcgctgctg actgattcag ccgcctcgga ggcactgcgc atcggcaacg
     1081 tggcgatggt ggtcgtgccg tccgcctccg gtcaggtgga gtacctctat gatgacagcc
     1141 ggccggaaag ccggactgcg cgcctgctgg tggacgaggt gcttcagcgc gccgcgggac
     1201 gccgggaccc actcatggtc cgcgaccagc tggttcgaga gcgtggtgcg cgctacatcg
     1261 acttcctggt gcccggactg ctggggatga atctgatggg gagcggcatc tgggggctgg
     1321 gctttgccat tgtggacgcc cggaaaaagc ggctgctcaa gcgcctgatc gccacaccga
     1381 tgtcgcgggc tcagtacctc gcgtcgtttg tgctgtcccg gctgaccctg ctcgtgatcg
     1441 aagtcggtct gctgctggga ttcggcgtgc tggtgttcgg cgttccccta cgcgggtcgc
     1501 tgccgctgct ggtcacgatc tgcctggtgt cgtcgctggc atttgcttca ctaggactcc
     1561 tgatcgcctc ccgggcacag acgatggaag gcgcctcagg
//
LOCUS       DASYRV010000140         7557 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1065022, whole genome shotgun sequence.
ACCESSION   DASYRV010000140 DASYRV010000000
VERSION     DASYRV010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7557
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1065022"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            169..882
                     /locus_tag="VGQ24_03455"
     CDS             169..882
                     /locus_tag="VGQ24_03455"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEV8453921.1"
                     /translation="MTAASEPSSGQDFPEPRPLVKRYAALVRLTHWLNAVFLVGMVAS
                     GLQIYNAYAHFGIRGELLPVPNPFDGRPMPQWARLGGWLAGGLNWHFLLAWPFVITGL
                     VYLAFLTISGEWRSLVFRPRDIGPAIQMQLYYLHLRKDHPSQGKHNALQKGAYTFIVA
                     LGAIAALSGFAIYKPVQLSWLTSLFGGYELARYWHFVAVWLFVGFTLLHVALVFLVDP
                     ASLRGMITGWYRGRFPSHD"
     gene            875..1609
                     /locus_tag="VGQ24_03460"
     CDS             875..1609
                     /locus_tag="VGQ24_03460"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEV8453922.1"
                     /translation="MTERSGITRRDFLRLGAVAGPASLVAACGWEGGSALEPKLRAFS
                     RINDWVGEKIQSPTRLAKEYPVSARTPMENFPSYSITYNNTGAFPSPASLEHWALNVG
                     GLVHKPVRLSRSAIEAMPRISYTVKHHCVEGWTAVATWTGVPLSTIVAMVRPTEQARY
                     LRFDSFDSDYYNGWDLKSAMHPQTILAYAYNDRPLMMNHGAPLRLYSPIKLGYKLTKY
                     LTGMTFTSERPGGYWEDRGYPWFGGV"
     gene            complement(1606..1848)
                     /locus_tag="VGQ24_03465"
     CDS             complement(1606..1848)
                     /locus_tag="VGQ24_03465"
                     /inference="COORDINATES: protein motif:HMM:NF025614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPXCG motif-containing cysteine-rich protein"
                     /protein_id="HEV8453923.1"
                     /translation="MNLPDDLNEEFPLGDGTAEIDAVVYCPYCGEINEIGLDPGSGSV
                     QEYVEDCQVCCRPWLVRVRYNRDGTAEVSLTVEDLG"
     gene            1872..3125
                     /locus_tag="VGQ24_03470"
     CDS             1872..3125
                     /locus_tag="VGQ24_03470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453924.1"
                     /translation="MRAGRFTTRFALPIGLTLLLLAARLAAVPALSDPVSGTAPPSLH
                     LATPPGYLLLAPLFTLWDGASMLSMSRLRGLLIGLALLYLLWRIWPGFRPRQGLSLVG
                     ELGTLAVSLVLLLGFLITGAVWHRPMLALAGVAPGDLVVDFHSHTNVSHDVRDTWMRG
                     FDTEANRRWHNRSGFDAVFITDHNTVAGLKGHSQNPNQPVVCPGIEVSAWRSHIVLLG
                     DSLPVDRSRYNHSLDALLTLLRISDSTYGALSVASLPEYQRNHWGRLDTLVAAGLDGF
                     EIVNAAPKANELARADRDSVIELARSRNRFVVGVNDSHGWGATSMVWNLVRVTGTQPG
                     SDRCGAVLRRLQDGFGAVQVIERHRLRPDAWWPMWLTPAGLLWETWRSMGWTLTAAWI
                     AWIWVLAGAGAMSRRRVGGKPSATV"
     gene            3436..4431
                     /locus_tag="VGQ24_03475"
     CDS             3436..4431
                     /locus_tag="VGQ24_03475"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: protein motif:HMM:NF006829.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HEV8453925.1"
                     /translation="MTRSRFLGTGFAVPDRIVTNDELSRLVDTTDEWIRTRTGIQKRH
                     WVKEGETGVDLAHRATQRALEMSGLAADDLDAIVYATSSPDHFAPGNGVYLQRLLGIS
                     TIPALDVRAQCSGFIYALSVADAWIRAGQFRHILVVGSEVQSTGLDLSTEGRHIAVIF
                     ADGAGAVVLGPAESEDGGILAFDLHSEGAQAEKLWVDSPGCMYHPRVSPEHLQTGRQY
                     LEMDGREVFRHAVVRMPESVRAVLAATGQSLDNLSLLLAHQANLRISEAMQKDLGLRD
                     DQVYNNIMWYGNTTAATIPIALDECVRGGRLHRGDLLVMTAFGSGFLWGSAAVRW"
     gene            complement(4529..4960)
                     /locus_tag="VGQ24_03480"
     CDS             complement(4529..4960)
                     /locus_tag="VGQ24_03480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453926.1"
                     /translation="MPRHPTVLVPNIGPMDHAWDLLGEWQTEFELPEADSPVHGKVTF
                     RSWTDAELQLDPVEAAIAGIPSSVPLERASEIHLTDAGGGALQWVLHAPSTNWSLQAT
                     LWPGSLHLFVHDADDDEEQLYRARATRDQEYYRRKYPLETK"
     gene            5471..5707
                     /locus_tag="VGQ24_03485"
     CDS             5471..5707
                     /locus_tag="VGQ24_03485"
                     /inference="COORDINATES: protein motif:HMM:NF003817.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HEV8453927.1"
                     /translation="MATLHCTRCGLDRDRMAFQPFQNDLGRRAFEEICGVCWAEWLKT
                     QQQLINHYGLNLREAKAKEFLFQNMEQFLFPVPR"
     gene            complement(5718..6692)
                     /locus_tag="VGQ24_03490"
     CDS             complement(5718..6692)
                     /locus_tag="VGQ24_03490"
                     /inference="COORDINATES: protein motif:HMM:NF022825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3187 family protein"
                     /protein_id="HEV8453928.1"
                     /translation="MLRDRLCLARLPLVILVLATPAGAWAQALPSFAPLNPISSSRSG
                     LYYQPLRESAPGRWVSTMGLDYASIIENNQTPEADYVLDSEVLRMSLGLSRDLGARSF
                     LMLEASVGGAYAGFMDGFLDWYHGLLGIRMSQRESRPRDRFLYEIGLPDGRTVQRSQN
                     SLFLDDLRVGLGFRPSSGLQTAVSLTLPTSTGPVGYGRGVPSLSLLNTVGALLNPRVH
                     YEGSLGLGFTPTNGSLASLQRELFVAVTSGVRVMVWERNSLFANLFYHSPYYQGTTLP
                     SLDRRELSLDFGWVLQTRTGGEWRVGMTEDLEPGGPGVDLVFRLGRTF"
     gene            6908..7557
                     /locus_tag="VGQ24_03495"
                     /pseudo
     CDS             6908..7557
                     /locus_tag="VGQ24_03495"
                     /inference="COORDINATES: protein motif:HMM:NF012998.4"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase domain-containing
                     protein"
BASE COUNT         1374 a         2408 c         2292 g         1483 t
ORIGIN      
        1 tcgttcgatc tcgtatgcag ccccgacact ggattgaagg cgctctagcg aatctcccat
       61 cgagagcctc gacaagggta ctctatagca tacggtcctc ggggcattgg aaccagcagg
      121 ccttggccgg taaatttcat actacccccg cctgtaggga gaagctgtat gacagcggcc
      181 tccgagccgt cctcgggcca agattttccc gaaccgcggc ccctggtcaa gcgatatgcg
      241 gcacttgttc gcctgactca ttggctcaac gccgtgttcc tcgtcggcat ggtcgcgagc
      301 gggctccaga tttacaacgc ctacgctcac ttcgggatcc ggggcgagct gcttcccgtc
      361 cccaacccgt tcgacggacg gccgatgccg caatgggccc ggctcggcgg ctggctggcc
      421 ggcgggctca actggcactt tctgctcgcc tggccgtttg tcataactgg gctcgtctac
      481 ctcgctttcc tcacgatctc gggggaatgg cgctccctcg tctttcgccc gcgggatatc
      541 ggccctgcca tccagatgca gctgtactat ctccatctgc ggaaggatca cccctcgcaa
      601 ggcaagcaca acgcactgca gaagggcgcc tacaccttca tcgtggcgct cggcgccatc
      661 gcggctctca gcggctttgc catctacaag ccggtgcagc tgagttggct gacgagtctg
      721 ttcggaggct acgagctggc ccggtactgg catttcgttg cggtctggct tttcgtcgga
      781 ttcaccctgc tacacgtggc tctggttttc ctggtggatc cggcatcgct ccggggtatg
      841 atcacgggct ggtatcgagg aagatttccc agccatgact gagcgttccg gcatcactcg
      901 gcgcgatttc cttcggctgg gagctgtagc cggacccgcg tcgctcgtag cagcatgcgg
      961 atgggagggg ggttccgccc tcgaacccaa gctcagggcc ttcagtcgga tcaatgattg
     1021 ggtgggagag aagatccaat ctccgacccg cctggcgaag gaatatccgg tgtccgcccg
     1081 aaccccgatg gagaacttcc cgtcttattc catcacgtac aacaacaccg gggcgttccc
     1141 gtcaccagcg agcctggagc attgggctct caatgtgggt ggcctggtgc ataaaccggt
     1201 gaggcttagc cgaagcgcca tcgaggcgat gcccaggatc agctacacgg tgaaacacca
     1261 ctgcgtcgaa ggctggaccg cagtagccac gtggaccggt gtccccctgt ccaccatcgt
     1321 ggcgatggtg cgcccgaccg agcaggcccg atatctccgg ttcgattcgt tcgacagtga
     1381 ttactacaac gggtgggatc tcaagagcgc catgcatccc cagacgatcc tggcctatgc
     1441 ctacaacgac cggccgctga tgatgaacca cggcgccccg ctccggctct actccccgat
     1501 caagctgggg tataagctca ccaagtacct gacgggtatg acgttcacct ccgagcggcc
     1561 gggcggatac tgggaagatc gcgggtaccc ctggttcggc ggcgtctagc cgagatcctc
     1621 cacggtgagc gatacctccg cggtcccgtc ccggttatag cggacccgga ccagccaggg
     1681 ccggcaacac acctggcagt cttccacgta ctcctgaaca ctcccgcttc ccggatccag
     1741 cccgatctcg ttgatctccc cgcagtacgg gcagtagacg actgcgtcga tttcggcggt
     1801 cccatctcca agagggaact cctcattcag atcatctggc agattcatga gcctccttcg
     1861 attgttccag catgagggca ggccgattca ccacccgctt tgccttgccg atcgggctca
     1921 cgctccttct gctcgcggcc cggctcgcgg cagtgcctgc cctatccgat cctgtatcgg
     1981 gcacggctcc gccgtcgctg catctggcaa cgcccccggg ttacctgttg ctcgcgccgc
     2041 tgttcaccct gtgggacggg gcctcgatgc tcagcatgag ccggctccgt gggctactca
     2101 tcggcttggc cctgctgtac ctgctctggc ggatctggcc gggcttccgt ccgcgacaag
     2161 gcctttccct cgttggggag ctaggtactc tggccgtatc tcttgttctg ctcctcgggt
     2221 ttctcatcac gggagcggta tggcaccgcc cgatgctggc tctggccgga gtcgcgccgg
     2281 gcgacctggt cgtagatttt cacagccata ccaacgtctc tcacgacgtg cgcgacacct
     2341 ggatgcgcgg gttcgacacc gaggcaaatc gacgctggca caaccggtca ggattcgacg
     2401 cggtcttcat caccgatcat aacaccgtcg cggggctgaa agggcacagc cagaacccga
     2461 atcaaccggt tgtctgcccg ggaatcgagg tcagtgcctg gcgatcgcac atcgtattgc
     2521 tgggcgactc cttgccggtc gatcggagcc ggtacaacca ctccctcgac gcgctgctca
     2581 ccctgctacg gatcagcgac tctacctacg gcgcactctc ggtcgcttcg ctgccggagt
     2641 accagagaaa tcactgggga cggctcgata ccctggtcgc ggctggactc gatggcttcg
     2701 agatcgtgaa cgccgctccg aaggccaacg agctcgctcg cgcagaccgc gactcagtca
     2761 tagaactggc acggtcacga aatcgattcg tagtcggggt gaacgacagc catggttggg
     2821 gtgccaccag catggtgtgg aacctggtac gggtgaccgg gactcagcca ggtagcgaca
     2881 gatgcggcgc cgtgttgcgc cggctgcagg atgggttcgg ggccgtgcag gtgatcgagc
     2941 gccatcgcct ccggccggat gcttggtggc ccatgtggct caccccggcg ggcctccttt
     3001 gggagacctg gcgcagcatg ggctggacac tgaccgcggc ctggatcgcc tggatctggg
     3061 ttcttgccgg cgcgggagcc atgagccgta ggcgcgtggg cggcaaaccc tccgcgacgg
     3121 tatgaagcag cgcttccagg ctggtagcgg aataggagat cgccgctact tcaacacgaa
     3181 ggcacgaagg tcacgaagga gacacccgac atcaggcagg aggatttttt ggtcaacagc
     3241 acaccgcccc agttcgataa cgcagcatgg actacgttgg tgtgcagtta gcaaagcatc
     3301 ttcttcgtga ccttcgtgac cttcgtgcct tcgtgttgaa gtagcggcga agccatgtgg
     3361 ccaagcagct gccggcctcc ggcgcttggg ccacttcagg attgcggagg acggatttgg
     3421 gggtcaagat agcaaatgac tcgtagccgc tttctgggga ccggtttcgc cgtgcctgac
     3481 cggattgtca ccaacgacga gctctcccgg ctcgtggaca cgaccgacga gtggattcgc
     3541 acccggaccg ggatccagaa gcgccactgg gtgaaggagg gagagacagg ggtcgacctc
     3601 gctcaccgag cgacccagcg ggcattggag atgtccggcc ttgctgccga tgacctggac
     3661 gcgatcgtgt atgccacatc gagccccgac cactttgctc cgggcaatgg cgtctacctc
     3721 cagcggctgc tgggaatctc gaccattccc gcactcgatg tccgcgcgca gtgtagcggc
     3781 ttcatctatg cgctctcggt ggcagatgcc tggatccggg cgggccagtt ccgccacatc
     3841 ctggtggttg ggtccgaggt tcagtccacg gggttggatc tctctaccga gggccgccac
     3901 atcgcggtca tcttcgccga cggcgccggc gccgtcgtgc tcggccccgc cgagtccgag
     3961 gatggcggca tcctggcgtt cgatcttcac tcggaaggcg cccaggcgga gaagctgtgg
     4021 gtagatagcc ctgggtgtat gtatcacccg agggtgtcac ccgagcactt gcagacgggt
     4081 cgccagtatc tggagatgga cggcagagag gtgttccgcc acgccgtggt gcgaatgccg
     4141 gaatcggtgc gtgccgtcct ggccgcaacc gggcaaagcc tggacaacct ttccctgctc
     4201 ctggctcacc aggccaatct gcggatctcg gaagccatgc agaaggacct aggcctgaga
     4261 gacgaccagg tgtacaacaa catcatgtgg tatggtaaca ccaccgcggc caccattccg
     4321 atcgccctgg acgaatgcgt acgcggcggg cggcttcacc ggggcgatct cctcgtcatg
     4381 acggcgttcg gatcgggctt tctgtggggg agcgcagcgg ttcgctggta agctccttca
     4441 atccattccg cctctgggaa aacaggttga ccaccaatcg aagcgcccgt caccacctgg
     4501 tgacgggcgc atcaagccat gagccggatt acttggtttc caacggatac tttcgccgat
     4561 aatactcctg gtcgcgggtc gctcgggctc ggtagagttg ctcctcgtca tcgtccgcat
     4621 cgtgcacgaa gaggtgtaat gagcccggcc aaagagtggc ctggagcgac caatttgtgg
     4681 acggcgcatg aagcacccac tggagcgccc cgccgcctgc gtcggtcaga tggatctcgc
     4741 tggcccgctc cagcggcacg ctggatggga tccctgcgat ggccgcttcg accgggtcca
     4801 gctggagctc ggcatccgtc cacgaccgaa atgtcacctt cccgtgcacc ggcgaatcgg
     4861 cttctggcag ctcaaactcg gtctgccact cgcccagcag gtcccacgca tggtccatgg
     4921 gaccaatgtt cggcaccagt actgtcggat gtctaggcat tgttgggctc cttccaatga
     4981 aagagcttag ccaaggacac taaatttgcc gcgattcgcg taccacagca cccagcctta
     5041 cgacgagcgg caatgaatct ttcccactta cgtttcgtac tgtaacgctg cgatcggccc
     5101 taacctaggg aagtcaacat gctacatcta cttataacgc tggccgctgg aatagccggg
     5161 ttcatcctcg cgcgaagttt cgtccgccgc cgccttcggt tcgtggacgc ggtccactct
     5221 ccgatcgcgc ccctcattgc cggttgcgtt gctgccctgg tggcctggcc ggcggtcctg
     5281 cttccggtgg tgacgcttag caccgcttta gtgttcggga tcggcaccgg actcggtact
     5341 gccagtggag cccgggcctt acgagaaggc gacaggagac gtcgtctcgc tccctgaacc
     5401 atactactgt cttcaccgaa attgcccaat agactggatc acattttaag tgctgtctat
     5461 cttgccctgc atggctaccc tgcactgtac ccgatgtggc ttagaccgcg accggatggc
     5521 tttccagccc tttcagaacg atctgggccg tcgtgcgttt gaggagatct gcggcgtgtg
     5581 ttgggccgaa tggctcaaga cccaacagca attaatcaac cactacggat tgaacctccg
     5641 tgaggcaaag gctaaggagt tcctattcca gaacatggag cagtttctct tccccgtccc
     5701 caggtgacgg ccccgcgcta gaacgtcctg cccaatcgaa ataccagatc gactccgggt
     5761 cctccaggct ccaggtcctc ggtcataccg actcgccact cgcctcccgt cctggtctgg
     5821 agtacccagc cgaaatccag cgagagctcc cgccgatcca gcgacggcag ggtggtaccc
     5881 tgataatagg gactatgata gaacaggttg gcgaacagcg agttgcgctc ccagaccatg
     5941 actcgtaccc cagacgtgac cgccacaaag agctctcgct ggaggcttgc caggctgccg
     6001 ttcgtcgggg taaagcccag acccaagctg ccttcataat gcacccgcgg attgagcaag
     6061 gcccccacgg tattcagcag actcaatgat ggcactccac ggccataacc cacgggcccg
     6121 gtggacgtgg gaagcgtaag cgacacggcg gtctgaagcc ccgagctggg tcgaaagccg
     6181 agccctaccc tgagatcgtc gaggaacaga ctgttttggg accgttggac cgttctgcca
     6241 tccggcaagc ctatctcgta gagaaaccga tcccgcggcc ggctctcccg ctggctcatc
     6301 ctgatgccga gcaagccgtg gtaccagtcg agaaagccgt ccatgaatcc ggcataggca
     6361 ccgcccaccg aggcttccag catcaggaac gagcgggctc cgagatcacg gctgagcccc
     6421 agactcatgc ggaggacctc ggagtccagc acgtagtctg cttccggcgt ctggttgttt
     6481 tcgatgatgc tggcgtagtc caggcccatc gtagagaccc aacgaccggg agcagactcg
     6541 cgtaatggct gatagtacag accgctgcgc gagctgctga tgggattcaa gggcgcgaat
     6601 gatggaagcg cttgagccca ggcaccggca ggagtggcca gaaccaggat taccagaggg
     6661 aggcgggcaa gacagaggcg atcacggagc acgcggaaag ataactcctc ttgacaaggc
     6721 cctgagccgg gccgtagctt cggtccatgg ttctcgcgcg cagctatcgg ttcttcttta
     6781 ccatcgccgg cagggctcga tgcccgtccg gtgtcggtag agtgccctaa gcgcttcacc
     6841 gcccgaacca tcgacgcccc gccggattgc cggtggggct tttgttttct tcctggggag
     6901 catgtccatg cgtgtagcca ttcagggctc ttatggatca ttcagcgaag ccgcggcgcg
     6961 ccggcgctgg cctgacctcg agcccctgcc atgtcgtgat gtgaaggatg tggtggccgc
     7021 cgttcgcgaa aggcgggcca tcgccgggtg cttgccgatc gagaattccc tcatcgggtc
     7081 ggtcaccacg acgtacgacc ttctgcacga ggcgtttggc gatgggacgc ttcggctgac
     7141 ccacgaaatc ttgcacccgg tacaccacac catcatggca ctaccgggcg cgtcgctatc
     7201 cggcattcgc cgggtactct cgcatcccgt ggcgctgggc cagtgccgag tctggctgtc
     7261 cgagcacctg ccggatccga gctggtgagt gcgtgggata ccgccgggag cgcagagatt
     7321 gtggcgcagg aaaagagccc gatactcgct gcgattgcgg ccaggccggc agcggatgcg
     7381 cacggcctgg taccattggc ggagcgcatc gaagacgacc cgacaaatca gactcggttc
     7441 ctcaccttca cgcgcgcgga atcgtctgac ggtctgcgct cgccaggtcc gagccgctac
     7501 aagacctcgc tcatcgtgct ggtggaccac aagcctggca tgctcgccct cacgctt
//
LOCUS       DASYRV010000141         3371 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1896559, whole genome shotgun sequence.
ACCESSION   DASYRV010000141 DASYRV010000000
VERSION     DASYRV010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3371
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1896559"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..493)
                     /locus_tag="VGQ24_03500"
     CDS             complement(<1..493)
                     /locus_tag="VGQ24_03500"
                     /inference="COORDINATES: protein motif:HMM:NF015791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate epimerase"
                     /protein_id="HEV8453929.1"
                     /translation="MIPVLTPEQSNNWDQRAAAAGVELATLMECAGRAAAVVLADRYA
                     HLLRTGVLVAAGPGNNGGDGWVLARALHRLDVPVWVTSSGTGTDLRERMARLARTEGV
                     REVAPDGPWPTIGIAIDALLGTGASGAPRPAVAALLARVLDLEIPILAIDGPTGVDLL
                     TGIV"
     gene            complement(840..1226)
                     /locus_tag="VGQ24_03505"
     CDS             complement(840..1226)
                     /locus_tag="VGQ24_03505"
                     /inference="COORDINATES: protein motif:HMM:TIGR04138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Minf_1886 family protein"
                     /protein_id="HEV8453930.1"
                     /translation="MNDLQFADDVMGRIRARGGRYNERAYLFLLGTIEFLQSRLEVRR
                     HVTAAELAWACRDFALQQYGLLAPVVLAHWGITRTEDLGRIVYTLVEVGLLVTQPGDH
                     ESDFNAVYQFTDAFGESYDWQGLRGA"
     gene            complement(1257..2540)
                     /gene="glyA"
                     /locus_tag="VGQ24_03510"
     CDS             complement(1257..2540)
                     /gene="glyA"
                     /locus_tag="VGQ24_03510"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016291634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEV8453931.1"
                     /translation="MILDHNATLRQADPTVARLIDAELRRQQHGLELIASENFASRAV
                     IDAMGTPLTNKYAEGYPGRRYYGGCEVVDEVEQLAIDRLKQLFGAEHANVQPHSGAQA
                     NFAAFMALIRPGELLMGMSLPHGGHLSHGAAVNHSGVVWRAVHYGVDPTTGRIDHDRV
                     REQAKREQPKLIIAGGSAYARIIDFAAFRSIADEVGAILLVDMAHFAGLVAGGVYPSP
                     VPHAQVVTSTTHKTLRGPRAGLILCTVEYAKAIDKSVFPGTQGGPLEHVIAAKAVAFG
                     EALTDDFKAYARQVVENAKALAGALIERGFAIVSGGTDSHLMLVDLRPKNLTGKAAEK
                     LLGLAGITVNKNTIPDDPQSPFVTSGIRIGTPAVTTRGMGVPEMIRIAELIDRALTRP
                     DEATLAQVHHEVEEMTSVFPLYQAARKPSRVRRTA"
     gene            complement(2537..2980)
                     /gene="rpiB"
                     /locus_tag="VGQ24_03515"
     CDS             complement(2537..2980)
                     /gene="rpiB"
                     /locus_tag="VGQ24_03515"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HEV8453932.1"
                     /translation="MAEVIPIGSDHAGYQLKERLVEELRALGYEPLDLGTHSPESTDY
                     PDYAHRVASRVEHQDASRGVLLCGTGLGMSYTANRHPGVRAAVAWSPEVARLAREHND
                     ANILILPARFVSEDEGVEILKTWLDTQFEGGRHRRRVAKIDKEGE"
     gene            complement(3119..>3371)
                     /locus_tag="VGQ24_03520"
     CDS             complement(3119..>3371)
                     /locus_tag="VGQ24_03520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="leucine dehydrogenase"
                     /protein_id="HEV8453933.1"
                     /translation="RGILYAPDYVINGGGVINVYGELHRWPVERAKKKAGEIYDTLLR
                     IFEMAKREKIPTYQAADRLAQQRIAAVGSLDRMWVGKRG"
BASE COUNT          585 a         1097 c         1081 g          608 t
ORIGIN      
        1 ggactatgcc ggtcaataga tccactccgg tcgggccatc gatcgccagg atcgggatct
       61 cgagatcgag aactcgggcc aggagggcgg ctacagccgg acgtggtgca cccgaggcgc
      121 cggtgccgag gagagcgtcg atggcgatgc cgatggtggg ccagggacca tcgggcgcga
      181 cttcccgaac gccctcggtt cgggccaacc gggccattcg ctcccgcagg tccgtgccgg
      241 tcccgctcga ggttacccag actggaacat ccaggcggtg cagcgcacgg gccaacaccc
      301 acccgtcccc accgttattc ccgggaccag cggcgaccag cacaccggtt cgcagcaagt
      361 gggcgtagcg atccgccagc accactgccg ccgcgcgtcc ggcacactcc atgagcgtgg
      421 caagctccac cccggcggcc gcggcgcgtt gatcccagtt attggattgt tcgggagtga
      481 ggacggggat cattgaggtg agaggtgaga ggtgagaggt gagaggtgag aggggtctaa
      541 tgcccgactc tcctcgtcct gagcgaagcg aaggaactat gtcgattggt tcggtgcctg
      601 cttctcacct ctcacttctc acctctcact tgtaactttg ccctatcgcc cgtccgaagc
      661 tgatttcacc gttgtcgatc cgaagattga acccgcaatc ggggttggta cagacccacg
      721 ccttgtatgt gatcggagcc ccttcgcggc cgtaatcgga aagtgggatc agcgttcctt
      781 gggagcattt ctgacaggcc ggccactctt tcgtttccat gtccccctcc cccctcacac
      841 taggcgccgc gcaggccctg ccaatcgtag gattcgccga acgcgtcggt gaactgatac
      901 accgcgttga agtcggattc gtggtcgccg ggctgagtta ccaggagacc tacctccacg
      961 agtgtgtaga cgatgcggcc cagatcctcg gtccgggtaa tgccccaatg ggccagaacc
     1021 accggcgcca ggagcccgta ctgttgcagc gcgaaatcac ggcaggccca cgccagctcc
     1081 gccgcggtga cgtggcggcg aacctcgagg cgcgattgaa gaaactcgat cgtccccaga
     1141 agaaagaggt acgcacgctc gttatagcgg cccccgcggg cgcggatccg gcccatgacg
     1201 tcatcagcaa actgcagatc gttcaacgaa attcctccaa aagatgggtc atctcgtcac
     1261 gccgttcgac ggacccggct cggcttgcgc gcagcctggt agagggggaa cacggaggtc
     1321 atctcctcca cttcatggtg tacctgggcc agggtggctt cgtccgggcg ggtcagcgcc
     1381 cggtcgatga gctccgcgat ccggatcatc tcgggaactc ccatgcctct ggtcgtcacg
     1441 gcgggggtgc cgatccggat accactggtg acgaagggcg actgtggatc atccggaatg
     1501 gtgttcttgt tcaccgtgat cccggcaagc ccgagcagct tctcggccgc cttgcccgtg
     1561 agattcttgg gccggaggtc caccagcatg aggtgggagt ccgttccacc cgagacgatc
     1621 gcaaagccgc gctcgatcag cgcgccggcg agagccttgg cattctccac cacctggcgg
     1681 gcgtaggcct tgaagtcatc ggtgagcgcc tcgccgaacg cgaccgcctt ggcggcgatg
     1741 acgtgttcca gcggaccgcc ctgggttccg ggaaacaccg acttgtcgat tgccttggcg
     1801 tactcgacgg tgcagaggat cagaccggcg cggggcccgc gcaaggtctt gtgcgtggtg
     1861 ctggtaacca cctgcgcgtg gggcaccggc gatggataca cgccgcccgc caccaacccg
     1921 gcgaaatgcg ccatgtccac cagcaggatc gctcccacct cgtcggcgat ggaccggaac
     1981 gcggcgaagt cgatgatccg ggcgtaagcg ctacccccgg cgataatgag cttgggctgc
     2041 tctcgtttgg cctgctcccg aacccggtca tgatcgatcc ggccggtcgt cggatcgaca
     2101 ccgtaatgca ccgcccgcca gacaaccccg ctgtgattta cggcggcgcc gtgagacagg
     2161 tgacctccgt gcgggagcga catccccatg agcagctcgc cggggcggat cagtgccatg
     2221 aatgccgcga aattggcctg agccccggag tgcggctgca cgttggcgtg ctccgccccg
     2281 aatagctgct tgaggcggtc gatggcgagc tgctcgacct cgtccaccac ctcgcacccc
     2341 ccgtagtacc gccggccggg gtacccctcg gcgtacttgt tggtcagagg agtgcccatg
     2401 gcatcgatca ccgcccggct ggcgaagttc tcgctggcga tcagctccaa tccatgctgc
     2461 tgcctgcgga gctcggcatc gatgagccgc gcgacggtag gatcggcttg gcgaagtgtt
     2521 gcgttatggt cgagaatcat tcgccctcct tatcgatctt cgccacgcgg cggcggtggc
     2581 ggccgccttc gaattgagtg tccagccagg tcttcaggat ctcgacgccc tcgtcttcgc
     2641 tcacgaaacg agccggcaga atcaggatgt tggcgtcgtt gtgctcgcga gcgagtcggg
     2701 caacctcggg cgaccaggcg accgcggcac gcaccccggg atggcggttg gcggtatagg
     2761 acatcccaag tccggtgccg cagaggagca cgccacgact ggcgtcctga tgctccactc
     2821 gggaggcaac tctatgagcg taatccggat aatcggtgga ttcgggactg tgggtgccga
     2881 ggtcgagcgg ctcgtaaccc aacgcccgta gctcctccac cagccgttcc ttcaactgat
     2941 agccggcgtg gtccgatccg atcgggatga cttcggccat tgagactaag gtaagagaag
     3001 gcggggaagc gggaaaggcg tgcaggtggg cagcggagcg gcggggcggc gcggctttca
     3061 agccgaaccc acgctaggtg tgtccttgct gccacgctgc cccgctgccc cgccctactt
     3121 acccccgctt ccccacccac atccgatcca ggcttcccac cgcggcgatg cgttgctgcg
     3181 cgaggcggtc agccgcctgg taggtaggga tcttctctcg cttggccatc tcgaagatcc
     3241 gcagaagcgt gtcgtagatc tccccggcct tcttcttggc ccgctccacc ggccagcggt
     3301 gcagctcgcc gtagacgttg atgacgcctc caccgttgat cacatagtcg ggggcgtaga
     3361 ggatgccgcg c
//
LOCUS       DASYRV010000142        18737 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_886213, whole genome shotgun sequence.
ACCESSION   DASYRV010000142 DASYRV010000000
VERSION     DASYRV010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 18737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18737
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_886213"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..249)
                     /locus_tag="VGQ24_03525"
     CDS             complement(<1..249)
                     /locus_tag="VGQ24_03525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453934.1"
                     /translation="MGIGAHATGLAALGVTLAAAACGSPGPRPLAFGTEQCAHCHMAL
                     ADPRFAGELVTTTGKTIPFDDVGCLAKYVGTGGMSRERI"
     gene            complement(219..806)
                     /locus_tag="VGQ24_03530"
     CDS             complement(219..806)
                     /locus_tag="VGQ24_03530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453935.1"
                     /translation="MRRSSRVLVAVCSLALGVLFVTPLWHIGLTAPQYPEGLGMYIWV
                     NRITGEKPQDLNSINGLNHYIGMREILPESFPELQYMPIVVGALIGLGLVAALWGNPK
                     GLYAWTGIFLAGALAGLADFWRWGYQYGHQLNPRAAIKIEGMSYQPPLLGSKQLLNFH
                     ATSWPVVGGWVAVLVMAVAVTLVVREWGSARTRPG"
     gene            complement(880..2844)
                     /gene="nosZ"
                     /locus_tag="VGQ24_03535"
     CDS             complement(880..2844)
                     /gene="nosZ"
                     /locus_tag="VGQ24_03535"
                     /EC_number="1.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050304 - nitrous-oxide reductase activity
                     [Evidence IEA];
                     GO_process: GO:0019333 - denitrification pathway [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-dependent nitrous-oxide reductase"
                     /protein_id="HEV8453936.1"
                     /translation="MPNLRYRPGAGLLIAAVAALTLSGCGKSTAPLGAATDAAARVYI
                     APGQYDELYAFMSGGFSGNVTVYGLPSGRLLQQIPVFSQYPEKGYGYSEETKALLNTS
                     YGFVPWDDVHHPQLSMTDGMADGRWLFVNGNNTPRIARLDLTRFETEEIIEIPNAAGG
                     HGSPYLTQNSEYAVSATRFAVPTPQADVPIKSGKFGGMLSFVKIDSVSGHMSLAFQIL
                     VPGYDYDLARAGKGPSHGWSFFSTYNTEEARTLLEMNASQKDKDYIAAVNWKQAEACV
                     AGGKGKAWSTPFAHNWIGEGGVARSEMLRSQKVIEPADCPGIVYFLPTPKSPHGTDVD
                     PTGEYIVGGGKLATVIPVHSFTKLQKAIADKAFDGEVGGISVIKYDAVNVCEVQNPGL
                     GPLHTEFDDKGFAYTSVFISSEIVKWSLKECKVVDRVPTYYSIGHLMIPGGDTRKPYG
                     KYMLALNKITKDRYLPTGPELTQAAQLYDISGDKMKLLLDFPMTGEPHYAQALPASVL
                     KDKSQKAYVLGDNKDPYVTRSEKDVKAVRQGTKVHVHMTAIRSHFLPDNIEGIQVGDS
                     VYFHVTNLEQDWDVPHGFAMMGAQNSELLIMPGQTRTLVWVPQRPGVYPFYCTDFCSA
                     LHQEMQGYMRVSAKGSSVPLAWNGGAGTLK"
     gene            complement(2868..3347)
                     /locus_tag="VGQ24_03540"
     CDS             complement(2868..3347)
                     /locus_tag="VGQ24_03540"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEV8453937.1"
                     /translation="MPGIRRLGVAVVLALIAAGCGEKAEEKPEDERHETEEEQLTPFQ
                     LEHGIGPIKEKIELGALDPALAANGKEVFEAKCSMCHKMDTTYVGPSLAEVTARRTPA
                     YIMNMILNPQEMVEHHPVAKQLLAERMSFMPNQQLSQEDTRAVLEYLRTQAKGAAKP"
     gene            3655..4212
                     /locus_tag="VGQ24_03545"
     CDS             3655..4212
                     /locus_tag="VGQ24_03545"
                     /inference="COORDINATES: protein motif:HMM:NF024135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin domain-containing protein"
                     /protein_id="HEV8453938.1"
                     /translation="MSRLLILYGTTDGHTAKVARFLAQELQAQGTDVDLIEAGTSDPD
                     PRDYTAVIVAASVHAGGYQKAVVRWVRAHAPALGYTPSAFVSVCLGVLQLSPKVEREL
                     TEIMKRFAVQTNWNPPRIKRVAGALLYTRYGWLKRMVMLHMVKTAGGSTDVSRDHEYT
                     DWEDLRAFVKAFHAMCRVIARHQAA"
     gene            4223..4840
                     /locus_tag="VGQ24_03550"
     CDS             4223..4840
                     /locus_tag="VGQ24_03550"
                     /inference="COORDINATES: protein motif:HMM:NF024135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin domain-containing protein"
                     /protein_id="HEV8453939.1"
                     /translation="MSRLLILYGTTDGHTEKIARFLASELRSDGATVDVLDARTSNPQ
                     PGDYAGVLVAASIHAWGYQRAVVRWVRAHADALRGKPSAFLSVCLAVLQKDLKVQREL
                     GGIINRFEARTGWKPTRVKIVAGALPYTRYGWLKRAVMRRIVKKAGGSTDVSRDHEYT
                     DWSDLLGFAGTFHVLCEGRPAPLETATGASGCSGACCCSGVEISA"
     gene            4837..5514
                     /locus_tag="VGQ24_03555"
     CDS             4837..5514
                     /locus_tag="VGQ24_03555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453940.1"
                     /translation="MSMARQISPSTRAAGFWSAVFATVFSSAYVVAQLAEWVGWLGSA
                     GGPESSSTPLAIALLLTPSLLLGSSFLMLMVCIHQLVPPERRIWSHAAVAFATAYAVL
                     ISLVYFVQLTLVAPRLASGRSEGIEMLLFTPFDSFLYAVDILGYSFMSVATLFAAMGF
                     TGRGLDRVVRVLLTANGLLLPFIALQMYFHSLIWIAALWAVTFPGSTWALAMLFRRAA
                     TTPTAVA"
     gene            5772..7313
                     /locus_tag="VGQ24_03560"
     CDS             5772..7313
                     /locus_tag="VGQ24_03560"
                     /inference="COORDINATES: protein motif:HMM:NF024827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEV8453941.1"
                     /translation="MPKSPAIRILLAAAVVATGCTKTEIVYRDREPFNPAPDLASGLL
                     GYYTASSKQTTCGNCHVGHQSDWVATKHAGAAATLAAITPAPPASCYGCHTVNERGNK
                     LTGSAGWDAVTNDAYKDVQCESCHGPGAEHVTRPDDRSKWPLPRVGMSVADASCAACH
                     TGIHTPFAEEWGSSGHSQVVASPAGNASCASCHEAKATLKAWGVTTNYVEIAETAFIP
                     QTCAVCHNPHGSENTAMLRFPINTPDPDQNLCMKCHLRRGEPEPARSTPHAPQGFVVL
                     GTGGYRPPGANIDTLISLTTHASVANPRLCAGCHVNRYQVTAPATGAFVFNSTGHLFK
                     PIPCLDAQGKPTAATNCAYAPPARTFKACLGSGCHATEAIAAGRLAGARFEIEALAAQ
                     IWVDTDGDKSIDAAPVDAGYLAIIKRDRPAELTSATVITPARGAEFNVKTFGENRYDN
                     GDKSLGVHNPFLARALLAANIQELKTAYGLAPPPEAVATLMERALQDAQRRRPGFVKA
                     TPVMK"
     gene            7323..9329
                     /locus_tag="VGQ24_03565"
     CDS             7323..9329
                     /locus_tag="VGQ24_03565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453942.1"
                     /translation="MSVTLAFQLLQIPPGADSGVRGLTLSVAPDSLGAAAGAVRDTLT
                     QAPLPGGLATLFRSLFQVPQWIQIGGALVGALAALAVARLLWRRRRVIGAWLRGRTRQ
                     AQIAVVVLAAGVITAGAVTGAKTWDYMQHDNGFCTGCHIMERPFRRFAAGAGRHEDLK
                     CHDCHQQSIWASTRQMYLWVAERPEKIGAHAPVPNLRCRSCHAQGGKEKWEHVLRLAG
                     HKVHFESDSSALKDLACVQCHGAEVHRFVPSARTCTQSGCHEKQVVRLAGMAKLPEIN
                     CVTCHRFTTELPGLASRDSAVSAMVPQREQCRSCHQMTRRPQGYDLTRDPHKGSCGSC
                     HDVHAHTTPADAKSSCKTCHADLSRSAFHQGASHRRVAEACTTCHLPHQASVDASDCV
                     SCHSAVRTRGLFKAPMPFDTSAVLKARITPAASDVPALEPGLFEHRGKGDELPDERPP
                     TRASPRAIALAARDSFPHPRHKSLPCLTCHVVNRPEAGLVFQVPRGCDLCHHQAVIAG
                     RVEARDCARCHRAEGLAAPRQTELRVQVGARTPVTRLVGFRHDAHAKVVCADCHRPPS
                     TTPPDSVRTCQSCHVQHHEEQRNCVQCHSRGDLSAAHPRAAHVQCDACHTPSRIAALV
                     PVRSFCLTCHAKQQEHEPSQECTTCHLLKTPAEFRKELGGKRAG"
     gene            9344..10825
                     /locus_tag="VGQ24_03570"
     CDS             9344..10825
                     /locus_tag="VGQ24_03570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453943.1"
                     /translation="MLLATCAIGVLPTVARAQSWRLRFDASVQRVAFRGITPDSVSES
                     QVITGPTGGPVSPDGFAVTCAGDGFCRYFRAGALRRGVPASAGTDLTLWGLGIAGLRL
                     RVHARTVTDLTGDRVWPGTSPSFRLVEGYAEYAREGLTAKLGRMLEQSRLGSTGAGGL
                     DGVHATYRWTAPGLELGGYAGWGLARGTVLSVTSPAVNPLAEFQPGRRQVAAGLLAGV
                     HRRSLDLEAEYRREVDTFTDYFVSERFAVSLQARPAHALRVGAGADYDLAQGLWGSAD
                     ATIAYSGQGVWATLGARHYRPFFDLWTVWGVFSPVPHNGINGSIAVKPRSNVQLQARA
                     EWFRYEDTETSTPTVTVEDRGWRWGVDGAVTLNPRWRIEAGGHRELQPGAASGGFNGR
                     VTWSPDVALKMSVQGGSLERPLELRFQDAGVSWAGAAVDYRVAERWSAGLSVDRYWES
                     RDRPDPAAFDWNQWRVSARVSLTLGSAADRWVLPPGKPRSPTP"
     gene            10822..12276
                     /locus_tag="VGQ24_03575"
     CDS             10822..12276
                     /locus_tag="VGQ24_03575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEV8453944.1"
                     /translation="MKAWIGPAALLLSAVTLAAAGGAGLRQGPPPPFDHPQHAKLFVS
                     CATCHAGATEAGGALMPRAESCASCHDGRVETRVQWRPRPGLRSSNVRFDHHRHDELR
                     RARRDTSETCGDCHAERSAPWMRVRGPSAPQCLSCHTPGRTEHLAAPDTACASCHLPL
                     SRAIDVSKEQVARFPAPAAHAAASFMLTGGHGAQSRPTAPGSRVAQSCATCHARDFCA
                     ACHVNAPEVPTIQALDSDARSLALAHEVKAPATHAAKDFEFRHGAQAGRTGASCATCH
                     TQESCTTCHRAGAPRPALALFPAGPGRGIGARTTRTPPSSHVPGWEARHAPFAAASMK
                     NCVSCHTRDSCLSCHRPDAARRGSYHPASYLTRHPADAYSRASSCTDCHNVGEFCQSC
                     HAQGGLSARRTLLGAGGYHDGKRQFLVGHARAARQALESCVSCHVERDCLTCHSVIRG
                     RGFSPHGPGFDSERMLRKNPQLCIACHGTAIPRR"
     gene            12299..12526
                     /locus_tag="VGQ24_03580"
     CDS             12299..12526
                     /locus_tag="VGQ24_03580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453945.1"
                     /translation="MNAHSGSSNLPRGVAALRDPTLNKGTAFTEAERDVLGEVNTEVG
                     QIIVAEVDQKRVGELLAPDREALWSLIRKEG"
     gene            complement(12535..13197)
                     /locus_tag="VGQ24_03585"
     CDS             complement(12535..13197)
                     /locus_tag="VGQ24_03585"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEV8453946.1"
                     /translation="MARRPYALLLPALLLLPLFGRVMGGWATVTVEDLPDYVTVGKPL
                     PLTFMVRQHGRTPLPGVHPTIEARSGGNAARAAAEPGKEAGQYVAALTLREPGEWTIT
                     INSGWGGSKLTLLPIRAIAAGSPAPVALAADERGRRLFVSKGCVGCHTRNDVDVGEGA
                     MIGPVLTGKRYEVAWLRKFLADPAANPTNTGTFRMPNLGLKQAEIAFLAAFVNAERGG
                     AR"
     gene            complement(13268..13951)
                     /locus_tag="VGQ24_03590"
     CDS             complement(13268..13951)
                     /locus_tag="VGQ24_03590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEV8453947.1"
                     /translation="MNTILLVEDNRDFAATLRSNLEREGYAVRIAATGVEGLEQVGRE
                     PPDLVILDLMLPQLNGFAVLQRMRDQGLLMPVLIMTALGTEEEKLRGFGLGADDYIVK
                     PCGLREILARVRALLKRGGGGVGPPAPVSIGELSIDLAARVVRLGGLALSLRPKEFDL
                     LAALVRHRGRVVSRAELLREVWGYAAGIESRTVETHLAALRQRLRDDSQDPRYIVTVR
                     GAGYRLGEG"
     gene            complement(13948..15525)
                     /locus_tag="VGQ24_03595"
     CDS             complement(13948..15525)
                     /locus_tag="VGQ24_03595"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEV8453948.1"
                     /translation="MERGLDRAILGGMEASGSSRRFRRINLLWVVAALLGAAAIHATA
                     TAIHHPEPSRELMSHFASVTAEYVRAIADARLQSAAREMFAPGAPPAAGGALERFHLD
                     LVTRRVDHRTGPARPDAHPLADSVLLSSAAAAARHPADGSLVLHVVPDENGGEYALLI
                     SRQLDSSGAALGADGVVTGARTLVAHLFGPGTPPDTASDFLQRSRVSLEVSAGSGAPL
                     FRTPGPLLPFRATIHPGGALGELAITVGLAPPTGMLLALHTVSREQLWLSGLLLALTV
                     LVTVIAAASSRREALLARARSDFIAGVSHELRMPLAQILLASETLAGEREQNPTARLG
                     LATSIVRESRRLATLVDNVLLVARSGAVALRPALTPVEVAELYADVQDAVHLAVEDAG
                     QRLLLRAPPGLQVLGDRLLLRQALINLIDNACKYGRPNQTIRLDTDSSGPDRVLLVVE
                     DEGPGVPARLRARLFEPYERLPRDQMSERTGSGLGLAVVAQIARACGGSVRLENGGTG
                     GARVVLALQLAPSSRDS"
     gene            15615..15740
                     /locus_tag="VGQ24_03600"
     CDS             15615..15740
                     /locus_tag="VGQ24_03600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453949.1"
                     /translation="MAMRSGWARWGIALGVLIVLALIAHLAGGNLHGFLGKLHGR"
     gene            15757..18180
                     /locus_tag="VGQ24_03605"
     CDS             15757..18180
                     /locus_tag="VGQ24_03605"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8453950.1"
                     /translation="MRWAENIAHDLRHAVRSILRMPVLTAVVTLSLGVGIGVNTTIFS
                     WIEALVLNPLPGVPDGAGFRLLETRTRSGTHPGMSWPEFQDLRGIPEFPDPFAARMVP
                     FNLGAAGRIERSYGMLVSANYFSALGLRPALGRFFTPDEGARAGAAPVAVLSHEYWRV
                     HLASSPRVMGQTLRVNDRPLTIVGVGPPRFQGTHTGIDISVWVPATLAPVLFNGSTEL
                     TDRAARGYSVMGRLAGGVGLVRARQELDRAMDRLATAYPSTNRGVTGEVLAISDGPRG
                     PQRFMVRAIYLLQGIMLLLLLAVCGNTANLLLARASTRQREIGVRLALGSGRWRVARL
                     LLLESLLLGLLGAAVGTALAVWGTQALRAVPMIGALPIRFQTSIDATGLFFAILLGLG
                     SGILFGTAPALQLVRLNPQDVLRSGTNTAPRPGLRNALMGVEVALASIVLMAAGVFFQ
                     RFQDSRETDPGFRREGVLLAAYDLGGGVYDSASVRTFTERLLDRLKALPAVEAAAIAS
                     SVPLDIHGLPSRSFALEGRASSDAIPDEALINVVTPGYFRAMGLPLLAGTDFVELGDR
                     SAKPQAIVNEAFVRRYLEGREPLGRWLQTGTARYRIAGVVKTSIYDAFGEPPTPAIYF
                     SYRDRMPWRGEIHLRTRPGEEQGLAPELRRIVAELDPMLPVYDVRTLNEHVDKNLFLQ
                     RIPARMFVVLGPLILALASLGIYAVVAYAVVQRTREIGVRLALGATAPRIVGQLISES
                     MQIIGFGAVAGSLLAFMVGRRLSSSGSLPAPVVIGVPVVILSVALVSCWLPARRASRI
                     DALAALRWE"
BASE COUNT         2921 a         6518 c         6206 g         3092 t
ORIGIN      
        1 gatccgctcc cggctcatcc cgccggtgcc tacatacttg gccaggcatc cgacgtcgtc
       61 gaacgggatg gtcttccccg tcgtggtgac cagctcaccg gcgaaacgcg ggtcggccag
      121 tgccatgtgg cagtgggcgc actgctcggt gccgaatgca agcggccgcg gcccggggga
      181 cccgcaagcc gcggccgcca gcgtcacacc gagcgccgct agcccggtcg cgtgcgcgcc
      241 gatccccatt ccctcaccac gagtgtgacg gccacggcca tgacgagcac ggcgacccac
      301 ccgcccacca cgggccagct ggtcgcgtgg aagttcagca gttgtttgct gcccaggagc
      361 ggcggttgat agctcatgcc ttcgattttg atggcggccc gggggttgag ctggtgcccg
      421 tattgatatc cccatctcca gaaatcggcg agccccgcca gggcccccgc gagaaagatc
      481 ccggtccagg cataaagccc cttggggttg ccccagagcg ccgccaccag ccccagcccg
      541 atcagtgccc cgaccacgat cggcatgtac tggagctccg ggaagctctc gggcaagatc
      601 tcccgcatgc cgatgtagtg gttgagcccg ttgatgctgt tgaggtcctg gggcttttcc
      661 ccggtgatcc ggttcaccca gatgtacatc cccagtccct cggggtactg gggagccgtg
      721 agcccgatgt gccagagcgg cgtcacgaag agcaccccga gggcaagcga gcaaacggcg
      781 accaggactc gtgaagaacg ccgcatgagc ccttgtttgg caaggtccct gccgccgggg
      841 cgcccgtgag agacgccgcg gcctggagga cactggtcgt catttcaagg ttccggcccc
      901 gccgttccat gccagcggca cgctggagcc cttcgccgag acccgcatat agccctgcat
      961 ctcctggtgc aacgccgagc agaaatcggt gcagtagaac gggtagaccc ccgggcgctg
     1021 cggcacccag accagcgtgc gcgtctggcc cggcatgatc aggagctcgg aattctgagc
     1081 gcccatcatc gcgaatccgt gcggcacgtc ccagtcctgc tccaggttgg tcacgtggaa
     1141 gtagaccgag tcgcctacct gaatcccctc gatgttgtcc gggaggaagt ggctgcggat
     1201 cgcggtcata tggacgtgca ccttggtgcc ctgccggacc gccttcacgt ccttttcgct
     1261 ccgggtgacg taggggtcct tgttgtcgcc cagcacatag gccttttgcg acttgtcctt
     1321 gagcaccgag gccggaagcg cctgggcata gtggggctcg ccggtcatcg ggaagtcgag
     1381 cagcagcttc atcttgtcgc cgctgatgtc gtagagctgg gcggcctggg tcagctccgg
     1441 cccggtcggc agataccgat ccttggtgat cttgttgagg gcgagcatgt acttcccgta
     1501 gggcttgcgg gtgtcgccgc ccgggatcat caggtgtccg atcgagtagt acgtcggcac
     1561 ccggtccacg accttgcact ccttgaggct ccacttcacg atctccgagc tgatgaacac
     1621 cgaagtgtag gcgaagccct tatcgtcgaa ctcggtatgc agcggtccca ggccggggtt
     1681 ctggacctcg cagacgttca cagcgtcata cttgatcacg gaaatccccc ccacctcgcc
     1741 gtcgaacgcc ttgtcggcga ttgccttctg cagcttggta aacgaatgca ccgggatgac
     1801 cgtggcgagc ttgcctccgc ccacgatgta ttcgccggtg ggatccacgt ccgttccgtg
     1861 gggcgacttg ggcgtcggca ggaagtagac gatccccggg caatcggccg gctcgatcac
     1921 tttctggctg cgcagcatct cgctgcgagc caccccgcct tccccgatcc agttgtgggc
     1981 gaaaggcgtg gaccaggcct tccccttgcc ccccgccacg caggcctcgg cctgcttcca
     2041 gttcaccgcc gcgatgtagt ccttgtcctt ctgggaggcg ttcatctcca gcagggtcct
     2101 ggcttcttcg gtgttatagg tgctgaagaa tgaccaccca tgcgacggcc ctttgccggc
     2161 gcgggccaga tcgtagtcgt atccaggcac caggatctgg aaggccagac tcatgtgccc
     2221 ggagaccgag tcgatcttca cgaagctcag catccccccg aatttcccgc tcttgatcgg
     2281 cacatcggcc tggggcgtcg ggaccgcgaa tcgggtcgcg ctcaccgcgt actccgagtt
     2341 ctgggtgagg tagggcgacc cgtgcccgcc ggcggcattg ggaatctcga tgatttcctc
     2401 ggtctcgaac cgggtcaggt cgagccgggc gatccggggc gtgttgttgc cgttgacgaa
     2461 caaccagcgg ccgtcggcca tgccgtcggt catcgacagc tgcgggtgat ggacgtcatc
     2521 ccagggtacg aagccatagc tcgtattgag gagcgctttc gtctcctccg agtagccata
     2581 gcccttctcg ggatactgcg agaagaccgg aatctgttgc agcaggcgtc ccgagggcag
     2641 gccatagacc gtcacgttgc cggaaaaccc accggacatg aaggcataca gctcgtcgta
     2701 ctggcccggc gcgatgtaga ccctcgcggc ggcgtcggtc gcggcaccga ggggcgcagt
     2761 ggacttgcca cagccgctca gcgtcagcgc ggcaaccgcg gcgatcagca ggccggcgcc
     2821 aggccggtag cgaagattcg gcacgggaac actcctggtg ggtgagatca tggtttcgct
     2881 gcgcccttcg cctgcgtccg caagtactcg aggacggcgc gggtgtcttc ctgcgaaagt
     2941 tgctggttcg gcatgaacga catccgctca gcgagcaact gtttggcaac ggggtggtgt
     3001 tcgaccatct cctgcggatt cagaatcatg ttcatgatgt acgcgggcgt ccgtcgggca
     3061 gtgacctcag ccaatgacgg gcccacgtag gtcgtatcca tcttgtggca catcgagcac
     3121 ttggcctcga acacctcctt gccgttggcg gcgagggcgg ggtcgagcgc gccaagctcg
     3181 atcttttcct tgatcggtcc gatcccgtgc tccagctgga agggtgtgag ctgctcctcc
     3241 tccgtctcgt gacgctcgtc ctccggcttt tcctccgcct tctcgccgca cccggcggcg
     3301 attagggcca gcacgacagc gactcccaac cgacgaatgc ccggcatcca actgctcctt
     3361 tcgggtgagg ccgaggcacc gcggcccctc ggatgtatga agccaatttg atcgccggtg
     3421 cgtagccgcg gcgtgaagcg tccatgaagc cttcttcact ctcggctcgg caccatgaac
     3481 gccgcttcac ggagaatccg cgaagtctta acaaggacta tgcgattgtt cccgcggtcg
     3541 agtgccgcgg agtccgccag ctatcggctt ggtatggtga ccgcgctggt ggtgcagccg
     3601 gcaggtgcct gagtcactga acccgagtat cacaaacgac cccggaggga ctccatgtcc
     3661 cggctcctca ttctctatgg cacgaccgac ggtcacaccg caaaggtggc ccgcttcctg
     3721 gcccaggagc tccaggctca gggtacggac gtcgacttga tcgaagccgg cacctcggat
     3781 cccgatccgc gcgactacac cgcagtcatc gtggcggcat cggtgcatgc cgggggttac
     3841 caaaaggcgg tggtgcgctg ggtccgggcc cacgctcccg ccctgggtta caccccctcg
     3901 gccttcgtct cggtctgcct cggggtcctt cagctgagcc cgaaggtcga acgcgagcta
     3961 accgaaatca tgaagaggtt tgcggtccag acgaactgga acccaccccg catcaagcgc
     4021 gtggcgggag cccttctgta cacccgctac ggatggctca agcgcatggt gatgctgcac
     4081 atggtgaaaa cggcgggcgg ctcgaccgac gtgtcgcgcg atcacgaata caccgactgg
     4141 gaggatctgc gcgctttcgt gaaggcattc cacgcaatgt gccgcgtcat cgcgcgccac
     4201 caggcagcat aggagcaacc ccatgagccg gctcttgatc ctctacggca cgactgacgg
     4261 ccataccgag aagattgcgc gctttcttgc cagcgagctc cgttcagacg gagcgacggt
     4321 cgacgtcctc gatgcgcgca cctcgaatcc ccagcccggc gactatgcgg gtgtcctggt
     4381 cgctgcctcg atacacgcct ggggatatca aagggcggta gtgcgctggg tgcgcgctca
     4441 cgccgacgcg ctgcgcggca aaccttccgc gttcctgtcg gtgtgcctgg ccgtgctgca
     4501 aaaggacctg aaggtccagc gggaattggg gggaatcatc aaccggttcg aagcccgaac
     4561 cggctggaag ccgacccggg tgaagatcgt agccggagcc cttccctaca cccgctatgg
     4621 gtggctcaag cgcgcggtga tgcgccggat cgtaaaaaag gcagggggct cgaccgacgt
     4681 ctcccgcgat cacgagtaca cggactggag cgacttgctc gggttcgctg gcaccttcca
     4741 cgtgctgtgc gagggccgcc ctgctcccct cgagacggcc accggggcgt ccggctgctc
     4801 cggtgcctgc tgctgctcgg gtgtggagat cagcgcatga gtatggcccg tcagatctcg
     4861 ccgtcgacaa gggcggccgg attctggtcc gcggtgttcg ctaccgtctt cagcagcgcg
     4921 tacgtggtgg cgcagctcgc cgagtgggtg ggatggctgg ggtccgctgg aggaccggaa
     4981 agttccagta cgccgctcgc gatcgccctc ctgctgacgc catcactgct gctgggctcc
     5041 tcctttctca tgctgatggt gtgcatccac caactggtgc ccccggagag gaggatctgg
     5101 agtcacgcgg ccgtcgcctt tgccacggcc tacgcggtcc tgatcagcct ggtgtacttc
     5161 gtgcaactca cgctcgtggc gccccggctg gcgagcggcc ggagcgaagg catcgagatg
     5221 ctgctgttca cgccgttcga ttcattcctg tacgccgtgg atattctcgg ctacagcttc
     5281 atgagcgtcg ccactctgtt tgccgcaatg gggttcaccg gtaggggtct ggatcgagtc
     5341 gtgcgggtgc ttttgaccgc caacggcttg ttgcttccct tcattgcgct gcaaatgtat
     5401 ttccattctc tgatatggat cgcggcgctt tgggcggtga cgtttccggg ttcaacgtgg
     5461 gcgctcgcta tgctctttcg ccgcgcagca acgacaccaa ctgctgtggc atgatggcgg
     5521 ggggccccga aggtcgcgag gcgtcatgcg cgttacctgg gctatccccg gcggcatcct
     5581 gcctcgctcc agggaattca gatggcaaat cccgaggact ctgtgaagaa ttcgtgaaat
     5641 cagtgtgaag aaagattacc gagcgctcga atgatactta cttggcactc tcagcagcaa
     5701 gaattaggat gctgatcgtc gtcgggtccg ccggatcgcg ctgtcgtgcc aggaacgagg
     5761 agtgcgccgc catgcccaag tcgcccgcca ttcgcattct gctcgcggcc gcggtcgtcg
     5821 ccaccggctg caccaagacc gagatcgtgt accgggaccg ggagcccttt aacccggcgc
     5881 ccgacctcgc cagcggactc ctggggtact ataccgcgtc cagcaagcaa accacctgcg
     5941 gcaattgcca tgtcggccac caaagcgatt gggtcgccac caagcacgcc ggtgccgcgg
     6001 cgacgctggc ggccatcacc cccgcgcccc ccgcgtcctg ctacggctgt cacaccgtca
     6061 acgagcgcgg caacaagctg accggctcgg cggggtggga cgcggtcacc aacgatgcct
     6121 acaaggatgt gcagtgcgag agctgtcacg gccccggcgc cgagcacgtc acgcggccgg
     6181 acgaccgcag caagtggccg ttgccgcgag tcgggatgag cgtggcggac gcgagctgtg
     6241 ccgcctgcca caccggcatt cacaccccgt tcgccgagga atggggctcc agcgggcatt
     6301 cccaggtcgt cgcctcgccc gccggcaatg cctcctgcgc ctcctgccac gaagccaagg
     6361 cgaccctcaa ggcgtggggc gtgaccacca actacgtgga gatcgccgag accgcgttca
     6421 tcccgcagac ctgcgccgtg tgtcataacc cgcacggctc cgaaaacacc gccatgctcc
     6481 ggttcccgat caatacgccg gatcccgatc agaacctctg catgaagtgc catctccgcc
     6541 gcggcgagcc ggaaccggcc cgtagcacgc cgcacgcacc gcaggggttc gtggtgctcg
     6601 gcacgggggg ctaccggccg cccggggcga acatcgacac gctgatctcc ctgaccaccc
     6661 acgccagcgt ggccaacccg cggctctgcg ccgggtgcca cgtgaaccgg taccaggtga
     6721 ccgctccggc gaccggggcg ttcgtgttca actcgaccgg ccacctgttc aagccgatcc
     6781 cctgcctgga cgcccagggc aagcccacgg ccgccacgaa ctgcgcctac gcgccgccgg
     6841 cccgcacctt caaggcttgc ctgggctcgg gttgccacgc caccgaagcg atcgccgccg
     6901 gacgcctggc cggggctcgc ttcgagatcg aggcgctcgc cgcccagatc tgggtggaca
     6961 ccgacgggga caagtcgatc gacgcggcgc cggtcgacgc cgggtacctc gccatcatca
     7021 agcgcgatcg gccagccgag ctcaccagcg cgacggtcat cacgccggcc cgcggggccg
     7081 agttcaacgt gaagaccttc ggtgaaaacc ggtatgacaa cggtgacaag tcgctgggcg
     7141 tccacaatcc cttcctggcg cgggccctgc tggccgcgaa tatccaggag ctgaagacgg
     7201 cgtacggcct cgcgccgccg ccggaagcag tggccactct gatggagcgg gcgcttcagg
     7261 acgcccagcg gcggcggccc ggcttcgtga aggcgacacc ggtcatgaag tagattcccg
     7321 gggtgagcgt caccctcgct ttccagctcc tccagattcc cccgggcgcc gacagcggcg
     7381 ttcgggggct cacgctttca gtcgcccccg attcactggg cgccgccgcc ggcgcggtac
     7441 gcgacacgct gacccaggcg cctctgcccg gcggccttgc caccctcttc cggtccctgt
     7501 tccaggtacc ccagtggatt cagatcggtg gtgcgctggt gggcgcactg gcggcgctgg
     7561 ccgtggcccg cctgctctgg cgccggcgtc gggtcatcgg agcctggctg cgagggcgca
     7621 cccgccaggc gcagatcgcg gtggtggtgc ttgcggccgg cgtgattacc gccggggcgg
     7681 tgactggtgc aaagacctgg gactatatgc agcacgacaa cggcttttgc accggctgtc
     7741 acatcatgga gcggccgttt cgccggttcg cggccggtgc gggacggcac gaagacctca
     7801 agtgtcacga ctgtcaccag caatccatct gggccagcac ccggcagatg tacctctggg
     7861 tggcggagcg cccggaaaag atcggagcgc acgcgccggt gcccaacctg cgctgccggt
     7921 cctgccacgc ccagggcggc aaggagaagt gggaacacgt gcttcgcctg gccgggcaca
     7981 aagtccattt cgagagtgac tcgtccgcgc tcaaggacct cgcgtgcgtg cagtgtcacg
     8041 gggccgaggt ccatcgattc gtgccgtcgg cgcggacctg tacccagagc ggttgtcacg
     8101 aaaagcaggt ggtgcggctc gccggcatgg cgaagctgcc ggagatcaac tgcgtcacct
     8161 gccatcggtt caccaccgag ctccccgggc tcgcctcgcg cgattccgcc gtgagcgcca
     8221 tggtccccca gcgggaacag tgccgcagct gccaccagat gaccaggcgg ccgcagggct
     8281 atgatctgac ccgcgatccg cacaaggggt cctgcggctc ctgccacgac gtgcacgccc
     8341 acaccacccc ggcggatgcg aaaagctcct gcaagacctg ccacgccgat ctctcccgga
     8401 gcgcgttcca ccagggcgcc agccatcggc gagtcgccga ggcgtgcacc acgtgccatc
     8461 tgcctcatca ggcctcggtc gacgcgtccg actgcgtgag ctgccatagc gccgtccgaa
     8521 cgcgtggtct gttcaaggcg cccatgccgt tcgacacttc ggcggtcctc aaggcgcgca
     8581 tcactcccgc agcttccgac gtccctgcgc tcgagccggg tctgttcgag caccggggca
     8641 agggagacga gctgccggac gagcgtccgc cgacgcgagc atcaccccga gccatcgctc
     8701 ttgccgcgcg cgactccttc ccgcaccctc gccacaaatc actcccctgt ctcacctgcc
     8761 acgttgtgaa ccggccggaa gccggacttg tcttccaggt gccgcgaggc tgcgacctgt
     8821 gtcatcatca agcggtgatc gcgggccggg tcgaggcaag ggactgcgcc cggtgccatc
     8881 gtgccgaagg acttgcagcc ccacggcaga cggagctgcg ggtgcaggtg ggtgctcgca
     8941 cgccggtaac ccgcttggtc ggcttccgcc atgatgcgca cgccaaggtc gtttgcgccg
     9001 actgccaccg gcctcccagc accacgccgc ccgacagcgt gcgaacctgc cagagctgtc
     9061 acgtacagca ccacgaggag cagcggaatt gcgtccagtg ccactcccgg ggagacctct
     9121 ccgcggcgca ccctcgcgct gcccacgtgc agtgtgatgc ctgccacacg ccgtcccgga
     9181 ttgccgcgct ggtgccggtc cgctccttct gcctgacctg ccacgcgaag cagcaggagc
     9241 acgagccgtc gcaggagtgc acgacctgcc atttgctcaa gacccctgcc gagttccgga
     9301 aggaactcgg ggggaagcgg gccggatgag gggacgccga tggatgctcc tggccacatg
     9361 cgccatcggc gtgctgccta ccgtcgctcg ggcccagtcg tggcggctcc gattcgatgc
     9421 ctcggtccag cgggttgcgt tccgaggcat cacgcccgac agcgtttccg agagtcaggt
     9481 catcaccggc ccgaccggtg gtcccgtctc tcccgacgga tttgccgtca cctgtgcggg
     9541 cgacggcttc tgccggtact tccgcgccgg cgctctccgc cgcggtgtgc cggccagtgc
     9601 cggcaccgac ctcaccctct ggggactcgg gatcgccggc cttcgcctca gagttcatgc
     9661 ccggaccgtg accgatctca ccggcgaccg cgtctggccg ggcacctcgc cctcgttccg
     9721 cctggtggag gggtacgcgg aatacgctcg cgagggactc accgcgaagc ttggccgtat
     9781 gctggagcag agccgcctcg gcagcacggg cgccggagga ctcgacgggg tccacgccac
     9841 ctaccggtgg accgcgcccg gcctcgagct gggaggctat gccggatggg ggctggcccg
     9901 cgggaccgta ctctccgtca ccagccccgc ggtgaatccg ctggcggagt tccagccggg
     9961 gcggcgtcag gtcgccgccg gcctgctcgc cggagtgcat cgacggtcgc tcgacctgga
    10021 ggcggaatac cgtcgcgagg tggacacctt caccgactac ttcgtttccg agcgctttgc
    10081 cgtgagcctg caggcgcgcc ccgcccatgc cctccgagtc ggcgcgggcg ccgattacga
    10141 tctggcccag ggtctctggg ggagcgccga cgccaccatc gcgtattccg ggcaaggcgt
    10201 ctgggccacg ctgggcgccc gacactatcg ccccttcttc gatctctgga ccgtctgggg
    10261 tgtcttcagc cccgtccccc acaacggaat caacgggtcg attgcggtca agccgcggtc
    10321 caacgtccag cttcaggccc gcgccgagtg gtttcgctat gaagacaccg aaacgagcac
    10381 gcccaccgtc accgtagagg atcggggctg gcggtggggc gtggacggcg cggtcacgtt
    10441 gaatccgcgc tggaggatcg aagccggagg gcaccgcgag ctccagccgg gcgccgcttc
    10501 cggcggattc aatggacggg tgacgtggag tcctgacgtc gcactgaaaa tgtcggtcca
    10561 ggggggaagc ctcgaacggc cgctggagct ccgctttcag gacgcagggg tcagctgggc
    10621 gggcgcagcg gtggactatc gcgtcgcgga gcgctggagc gccggcctct cggtggatcg
    10681 ctactgggag tcgcgagacc ggccggatcc ggcggcgttc gactggaacc agtggcgggt
    10741 gagtgcgcgg gtatcgctca cgctcggctc ggccgcggat cggtgggtat tgcctccggg
    10801 caagccgcgg agcccgactc catgaaagcg tggatcgggc cggctgcgct gctgctttcg
    10861 gcggtgacac tcgcggccgc cggcggggcc ggcctccgac agggtccgcc acctccattc
    10921 gaccatccgc aacacgccaa gcttttcgtc agctgcgcca cctgccatgc cggcgcgacg
    10981 gaggccggcg gcgcgttgat gccgagggcg gaaagctgcg cttcctgtca tgacgggcgg
    11041 gtggaaaccc gcgtgcaatg gaggcccagg ccgggtctac gatcctccaa tgtccgattc
    11101 gatcatcacc ggcacgacga gcttcgccga gcgcggcgcg acaccagcga aacctgcggc
    11161 gactgtcacg ccgagcgatc ggcgccctgg atgcgggtgc gcggaccgag tgcgccgcag
    11221 tgcctgtcgt gtcatacgcc gggacgaacc gaacacctgg ccgcacccga cacggcctgc
    11281 gcctcctgcc acctcccgct ctctcgcgcg atcgatgtgt cgaaggagca ggtagccagg
    11341 tttccggccc cggccgcgca cgctgccgcg agtttcatgc tgaccggagg ccacggggcg
    11401 caatcgcggc caaccgcgcc cggatccagg gtagcccaga gctgcgcaac ctgtcatgcc
    11461 agggatttct gcgccgcgtg ccacgtcaac gcgccggagg tgcccaccat ccaggcactc
    11521 gattccgacg cccgctcgct cgccttggcc cacgaggtca aggccccggc cacccacgcc
    11581 gccaaggact tcgaatttcg gcacggcgcg caggccggac ggaccggggc gagctgcgcg
    11641 acctgtcaca cccaggagag ctgcaccacc tgccaccgcg caggagcacc gagaccagcc
    11701 ctggcgcttt tcccggcggg acctggccgg ggcattgggg ctcgcaccac ccggacgccg
    11761 ccgtccagcc acgtgcccgg ctgggaggcg cggcacgccc cgtttgccgc cgcttcgatg
    11821 aagaactgtg tatcgtgcca caccagggac tcctgcctgt cgtgccaccg gccggacgcc
    11881 gcccggaggg ggagctatca tccggcgagc tacctcaccc ggcacccggc cgatgcatac
    11941 tcgcgcgcga gctcctgcac tgattgccac aacgtcgggg agttctgtca gagctgccac
    12001 gcgcagggcg ggctgtccgc ccggcggaca ctcctcgggg ccggcggata ccacgatgga
    12061 aagcggcaat tcctcgtagg gcacgcgcgg gcagcccgac aggcactgga gagttgcgtc
    12121 tcgtgtcatg tcgaacggga ttgcctcacc tgccattcgg tgatccgggg ccgagggttc
    12181 agtccgcatg gtcccgggtt tgactcggaa cggatgcttc gcaagaaccc ccagctctgc
    12241 atcgcctgtc acgggaccgc cattccccgg cgctagacca agagtctcag acgcttcgat
    12301 gaacgctcat tccggctcct ccaacctgcc ccgtggcgtg gccgcgctgc gcgatccgac
    12361 gctcaacaag gggaccgcct tcaccgaagc ggagcgcgat gtgctcggcg aggtcaacac
    12421 cgaagtcggt cagatcatcg tcgccgaagt cgaccagaag cgggtcggcg agctgctggc
    12481 gcccgatcgg gaggcgctct ggagtctgat ccggaaggag gggtagggag ccccctaccg
    12541 agccccgccc cgctccgcgt tcacgaacgc ggccagaaac gcgatctccg cctgcttgag
    12601 cccgagattc ggcatccgga acgtcccggt attcgtcggg ttcgccgccg ggtccgccag
    12661 gaacttgcgc agccacgcca cctcgtagcg cttgccggtg agcacggggc cgatcattgc
    12721 accttcaccg acgtccacat cgttgcgggt gtggcagccg acgcagccct tcgagacgaa
    12781 gagccggcgc ccgcgctcgt ccgccgccag cgcgacggga gccggcgaac cagccgcgat
    12841 cgcccggatc ggcagcaggg tcagcttgct gccgccccag ccgctgttga tggtgatggt
    12901 ccactcgccg ggctcacgca gcgtcagcgc ggcgacgtac tggccggcct ccttgcccgg
    12961 ttccgccgcc gcccgggcgg cgttgccccc ggatcgggcc tcgatcgtgg gatggacgcc
    13021 cgggagcggg gtcctcccgt gctggcggac catgaaggtg aggggcaggg gtttgcccac
    13081 cgtgacgtaa tcgggcaggt cctcgacggt tactgtggcc cagcccccca tgaccctgcc
    13141 gaacaggggg aggagcagga gcgccggcag gagcagtgcg tagggacgtc gtgccatggg
    13201 gtcctcccag gatggtgtgg ttttctgtcg gatgccggcc agccccggag ggtttaaggc
    13261 gaccccctca cccttcgccc agccgatacc ccgccccgcg aactgtgacg atatagcgcg
    13321 gatcctggga atcgtcgcgc agccgttgcc ggagcgcggc caggtgggtc tccacggttc
    13381 tgctctcgat ccccgcggca tacccccaca cttcgcgcag cagctcagcc cggctcacca
    13441 ctcgaccgcg atgccgcacc agcgccgcca gcaggtcgaa ctccttggga cgcaggctga
    13501 gcgccaggcc gccgagccgc acgacccgcg cggcgagatc gatgctgagc tcgccgatcg
    13561 acaccggcgc gggcggccct acccctccgc cgccgcgctt gagcagggcc cgcacccggg
    13621 ccaggatctc ccgcaacccg cacggcttca cgatgtagtc gtccgcgccg agcccgaacc
    13681 cgcgcagctt ctcctcttcg gtgcccagcg ccgtcatgat cagcaccggc atcaggagcc
    13741 cctggtcgcg catccgctgc aacacggcga acccgttgag ctgagggagc atgaggtcca
    13801 gaatcaccag gtccgggggc tcgcgcccga cctgttcgag tccctccact cccgtcgcgg
    13861 cgatgcgaac cgcataaccc tcgcgctcga gattgctccg cagcgtggcg gcgaagtccc
    13921 ggttgtcttc gaccaggaga atcgtgttca tgagtcccgg ctggatggcg ccagctggag
    13981 cgccagtacc acgcgggccc ctcctgtccc gccattctcc agccggacgc tgccaccgca
    14041 agccctggca atctgcgcca ccacggcgag tcccaggccg gagccggtgc gctcggacat
    14101 ctgatcgcgg ggcaggcgct catacggctc gaagaggcgg gcccggagcc tggcggggac
    14161 gccgggtccc tcgtcctcca cgaccaggag gacccggtcc ggaccgctcg agtcggtatc
    14221 gagccggatg gtttgattcg gccggccgta tttgcaggcg ttgtcaatca gattgatcaa
    14281 cgcctggcgc agcagcagcc ggtcgcccag cacctgaagc cccggtggcg cccgcagaag
    14341 gagccgctgg ccggcgtcct caaccgcgag gtgcaccgcg tcctggacgt cggcgtagag
    14401 ctccgcgacc tccaccgggg tgagcgcggg gcgcagtgcc acggcgcccg aacgggccac
    14461 gagcaggacg ttgtcgacca gagtcgccag gcggcgggat tcgcgcacga tggacgtggc
    14521 caggcccagc cgagcggtgg ggttctgctc ccgctcgccg gcgagggttt cgctcgccag
    14581 caggatctgt gcgagcggca ttcggagctc gtgggagacg ccggcgatga agtcggatcg
    14641 cgcccgcgcc agcagcgcct cgcgccggga ggatgccgcc gcgatcacgg tcaccagcac
    14701 ggtcagggcc agcagcaggc cgctgagcca gagctgctcc cgggacaccg tgtgcagcgc
    14761 cagcagcatg ccggtcggcg gggccagtcc gacggtgatc gccagctcgc caagggcgcc
    14821 gcccggatgg atggtcgctc gaaacggcag cagcgggccc ggggtgcgaa agagcggggc
    14881 gccgctcccc gcgctgactt ccaggctgac tcgggaccgc tgcaggaagt cactcgcggt
    14941 gtcgggaggg gtccccggcc cgaacaggtg ggcgaccagc gtgcgagcgc cggttaccac
    15001 tccgtccgcg ccgagcgcgg ctccgctcga atcgagctgc cgggagatga ggagcgcgta
    15061 ctccccgccg ttctcgtccg ggacgacatg caggacgaga gacccgtcgg ccggatggcg
    15121 cgcggcggcc gcggcggagg agagcagcac ggaatccgcc agcgggtgag catccgggcg
    15181 ggccgggccg gtccggtggt cgaccctcct cgtgaccagg tcgagatgaa agcgctcgag
    15241 ggcgcctcca gccgccggcg gagcgcccgg cgcaaacatc tcgcgggcgg ccgactggag
    15301 ccgggcgtcc gcgatcgctc tcacgtactc cgccgtcacg ctggcgaaat gactcatcag
    15361 ctcccggctc ggctcgggat gatgaatcgc cgtcgcggtg gcatgtattg ccgcggcgcc
    15421 cagcagagcg gccaccaccc acagcaggtt gatccgccga aagcggcgtg agcttcccga
    15481 ggcttccatg ccgcctaata tcgcccggtc gagaccgcgc tccacctctt cttacctcat
    15541 tctgacaata cggacccgga cggcgactag actccggttc cgactccacg ctgaccgcaa
    15601 ccagaggaga gcaaatggca atgcgttccg gttgggctcg atggggaatc gccctggggg
    15661 tattgatcgt cctggcgctg atcgcccacc tggccggggg caacctgcac gggttcctcg
    15721 gcaagctgca cggccggtaa gagcagcgga gcatccatgc gctgggccga aaacatcgcc
    15781 cacgatctgc ggcacgcggt cagatccatc ctcaggatgc cggttctgac cgccgtcgtc
    15841 acgttatcgc tgggtgtcgg gatcggggtc aacaccacga ttttctcctg gatcgaggcc
    15901 ctggtgctga acccgctgcc cggcgtcccc gatggcgccg gcttccggct gctggaaacc
    15961 cgcacccggt cggggaccca tcccggcatg tcgtggccgg agtttcagga tctccgcggc
    16021 atccccgagt ttcccgaccc cttcgccgcc cggatggttc cgttcaacct cggcgccgcg
    16081 ggccggatcg agcgcagcta cggcatgctg gtgtcggcca actacttcag cgcgctcggc
    16141 ttgcggccgg cgctgggccg gttcttcacg cccgacgaag gcgcccgggc cggagcggcg
    16201 ccggtggcgg tcctctccca tgagtactgg cgggttcacc tggcgagcag cccccgggtc
    16261 atgggccaga cccttcgggt caacgatcga ccgctcacca tcgtgggcgt cggcccgccg
    16321 aggtttcagg gcacccacac agggatagac atctcggtct gggttcctgc cacgctcgcg
    16381 ccggtgctgt tcaacggatc caccgagctc acggatcgtg ccgcgcgagg gtactcggtg
    16441 atggggaggc tcgcgggcgg cgtcggcctg gtccgcgcca ggcaggagct ggatcgggcg
    16501 atggatcggc tggccacggc atatccctcc accaacaggg gagtgaccgg ggaggtcctg
    16561 gcgatctcgg acggccctcg ggggccccag cgcttcatgg tccgcgcgat ctacctgctc
    16621 cagggcatca tgctcctcct gctgctcgcc gtctgcggca acaccgccaa cctgctcctg
    16681 gcgcgagcca gtacccggca gcgcgagatc ggcgttcggc tggcgctcgg ctccggccgc
    16741 tggcgggtcg cccgcctgct gctgctggag agcctgctgc tcggactgct cggcgccgcg
    16801 gtgggaaccg cgctggcggt ctggggcacc caggcactcc gggcggtacc gatgatcgga
    16861 gccttaccca ttcgcttcca gacgtccatc gacgcgaccg ggctcttctt cgccattctg
    16921 ctcggactgg gctctggcat cctgttcggc accgcgccgg cgctgcagct ggtccggctc
    16981 aacccgcagg atgtcctgcg gagcggcacc aataccgcac cgcgccccgg cctcaggaac
    17041 gcgctcatgg gggtcgaggt cgcgctcgca agcatcgtcc tcatggcggc gggagtcttc
    17101 ttccagcggt ttcaggactc gagggaaacc gatcccgggt tccggcggga gggtgtgctg
    17161 ctcgccgcgt atgacttggg cggcggggtg tacgattcgg cttcggtgcg gaccttcacc
    17221 gagcgacttc tcgaccggct caaggcactc ccggcggtcg aggccgcggc gattgcctcc
    17281 tcggtgccgc tcgacatcca cggactgcct tcccgcagct tcgccctcga aggccgggcg
    17341 tcgtccgacg ccattccgga cgaggccctg atcaacgtcg tgacgccggg ttatttccgc
    17401 gcgatgggcc tgccattgct cgcggggacg gacttcgtgg agctgggcga ccggagcgcg
    17461 aaaccgcagg ccatcgtcaa cgaggcgttc gtccggcggt acctggaagg ccgggagccg
    17521 ctcgggcggt ggctccagac cggaacggcg cgctatcgca tcgccggggt ggtcaagacc
    17581 tccatctacg atgcgttcgg cgagccgccc acgcccgcca tctatttctc ctatcgtgac
    17641 cgcatgccgt ggagagggga gatccacctc cgcacccggc cgggcgagga gcagggactg
    17701 gcgccggagc tgcgccggat cgtggcggag ctcgacccca tgctgccggt ctatgatgtg
    17761 cggaccctca acgagcacgt cgacaaaaac ctgtttctcc agcgaatccc ggcgcgcatg
    17821 ttcgtggtgc tgggtccgct gattctggcg ctcgcctcgc tggggatcta cgcggtggtg
    17881 gcctatgccg tggtgcagcg caccagggag atcggggttc ggctggccct gggcgccacc
    17941 gcgccgcgca tcgtgggaca gctgatctcg gagagcatgc agatcatcgg gttcggagcg
    18001 gtcgccggat cgctgctcgc cttcatggtc gggcgccggc tcagctcgag cggctcgctc
    18061 ccggcgccgg tcgtgatcgg cgtgccggtc gtgatcctgt cggtggcgct ggtttcctgc
    18121 tggctgcccg cgcgccgagc ctcacgcatc gatgcgctcg cggcgctccg ctgggaatag
    18181 tcacccacgt cacggaagcg gccgcgggct cggtatcttt gcccgatgcc ctccgcgcag
    18241 gacaccctca acgcagccct cgcccgccgt tacgccatcc ggcacgagcc ggggcgggca
    18301 ggatgggcgc actctacctg gtccagtacc tgaagcgcga ccgcgacgtg gcctgcagag
    18361 tcctgagccc cgaggtcggc ggtctcatcg tgcccgaccg gttttagcgg gagatccgga
    18421 tcgccgccgg tctgcagcat ccccacgtct gccgggtcta cgactccggc cggggccgac
    18481 ggcctcctct ggttcaccat gccctacgtc tcgggcgagt ccgacggtac ccacccgcag
    18541 cgcctcggcc aacccgaatg cgtcgcgccg gtcgctcttc tgcccccgac tctcgcgcac
    18601 ccgccgcgac cacgcactcc acgtgtgggg agagcacctc gtagagccag ttcgccagcg
    18661 tcccctcctc caggcaaggg tcccaccggc atgctcgccg agggcttccc aatcggcagg
    18721 gggtctagcg gtcagtc
//
LOCUS       DASYRV010000143         4915 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1716465, whole genome shotgun sequence.
ACCESSION   DASYRV010000143 DASYRV010000000
VERSION     DASYRV010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4915
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1716465"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2708)
                     /gene="rpoB"
                     /locus_tag="VGQ24_03610"
     CDS             complement(<1..2708)
                     /gene="rpoB"
                     /locus_tag="VGQ24_03610"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEV8453951.1"
                     /translation="MPMPHLLDIQTAAFQTLLVPDDVHGARQDVSLERVFRDLFPITD
                     VNEKYKLEFLGYALGEAKYSVEECVERDMTYAAPLKAKLRLDVYEEVEGQKRLKNAIE
                     KEVYLGELPIMTPLGTFVINGAERVVVSQLHRSPGVVFEEDTHPNGQRLFSARIIPFR
                     GSWVEFTIDIHDVIYVHIDKKKKFPATALLRAFGHGDNADILKLFFATKELNIAGKLE
                     GRQEKREVLGSLLAADVPNPEDRAGEPLGVVGDELTQERLNEMRHKGIKSVTVFAGYS
                     TLDVREEEQPTSTRDRQNHMLAFDAADPATGEVVAEAGAELTDVLRKKLIKSGVHKVE
                     VLLPAGRSESPLIKNTLAKDPTHSEAEALEQIYALLRPGDAPNLETARQQLQKLFFNP
                     KRYDLGRVGRYKINQRLKLKTDPNHTVLTEDDFVAIIRYLIDLHDGRGFTDDIDHLGN
                     RRIRSVGELIANQFSVGLSRMARLVKERMSINSDPEKISLDDLVNARTVSAVIQAFFG
                     SSQLSQFMDQTNPLAELTNKRRLSALGPGGLTRERAGFEVRDVHYSQYGRMCPIETPE
                     GPNIGLITSLSTYARINDLGFIETPYRVVKSGKVTDEIRWLSASDEEDYTVAQANAVL
                     NPDGTFGEQLVLCRKGDDYPLLPPERIDFMDVAPEQLVSIAAALIPFLEHDDANRALM
                     GSNMQRQSVPLLFPQAPLVGTGLEEKVARDSGAVIVARRAGTVTRVTADEIIVDAGTN
                     GTTVGDTPLARLHQHDRYRVKKFWRTNQDTAINQRPLVQLGQQVVAGEIIADGAATEG
                     GELALGSNVVVAFMPWYGHNFEDAIVLSERLVKDDVYSSIHIQELELHVRDTKRGQEE
                     ITREIPNVSDESVVDLDERGIVRIGAHVKPGDILVGKITPKGETELS"
     gene            complement(2950..3348)
                     /gene="rplL"
                     /locus_tag="VGQ24_03615"
     CDS             complement(2950..3348)
                     /gene="rplL"
                     /locus_tag="VGQ24_03615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEV8453952.1"
                     /translation="MPTTTLSNEEILEAIGNKTVVELSELIEAFKNKFNVTIAAAAAA
                     PAAGGGGGGAAAAAPVEEKTEWTVVLKEGGAKKIQVIKAVREITSLGLKEAKDAVDNV
                     PSNIKEGVSKAEAEEFKKKLEEQGAVVELK"
     gene            complement(3409..3924)
                     /gene="rplJ"
                     /locus_tag="VGQ24_03620"
     CDS             complement(3409..3924)
                     /gene="rplJ"
                     /locus_tag="VGQ24_03620"
                     /inference="COORDINATES: protein motif:HMM:NF000955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEV8453953.1"
                     /translation="MNKTERQETVESLTEQFRGSPNLYVTDFSGLNVLRLTEFRRRLR
                     AAGVSYVVVKNTLAQRALAANAVTALDDHLAGPTGLVLAGKDPVAAAKVLADFVREFE
                     KPAIKIGLVDGRPVTADQVKRLASLPPRDVLLSQLAGAMQAPVAQLAGVLNGVLYQMV
                     GALEALRAQRS"
     gene            complement(3921..4610)
                     /gene="rplA"
                     /locus_tag="VGQ24_03625"
     CDS             complement(3921..4610)
                     /gene="rplA"
                     /locus_tag="VGQ24_03625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEV8453954.1"
                     /translation="MATRGKKFRGAVAKVDRTREYPIPEAVALVKDSSFAKFDETVDV
                     AVNLGVDPRHADQVVRGTVVLPHGTGKSVRVLVITQGDRVREAEAAGADFVGVEYIQK
                     IKDGWLECDVIVATPDVMGQLGALGRVLGPRGLMPNPKAGTVTMDVTRAVREIKAGKI
                     EFRVDKTGNVHAPVGKVSFSSAQLADNVQAFMDTIARVKPAAAKGTYIRSATVSSTMG
                     PGVRLDTAVYR"
     gene            complement(4610..>4915)
                     /locus_tag="VGQ24_03630"
     CDS             complement(4610..>4915)
                     /locus_tag="VGQ24_03630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015540664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEV8453955.1"
                     /translation="QFNARTQAQSGMVIPVVVTIFADRTFSFITKTPPAPNLLLKEAG
                     IEKGSGQPNRVKVGRVTRAQVKKIAEIKMADLNAADLDSAMRMIAGTARSMGLEVVD"
BASE COUNT          773 a         1671 c         1520 g          951 t
ORIGIN      
        1 gacagctcgg tctcaccctt cggtgtgatc ttgcccacca ggatgtcgcc cggcttcaca
       61 tgcgcgccga tgcgtacgat gccgcgctcg tcgaggtcca ccacgctttc gtcggagacg
      121 ttgggaattt cccgggtgat ctcctcctga ccccgcttgg tgtcacgtac gtgcagctcg
      181 agctcctgga tatggatcga cgaataaacg tcgtccttca ccagccgctc gctgagcacg
      241 atggcgtctt cgaagttgtg cccgtaccag ggcatgaacg ccaccaccac gttgctgccg
      301 agcgccagct cgccaccctc ggtggccgcg ccgtcggcga tgatctcgcc ggccacgact
      361 tgctgtccca gctggaccag gggacgctgg ttgatggcgg tgtcctggtt ggtgcgccag
      421 aacttcttga cccggtagcg gtcatgctgg tgcagtcgcg ccaggggggt atcgcccacc
      481 gtcgtgccgt tggtaccggc gtccacgatg atctcgtcag ccgtgacccg ggtgacggtg
      541 cctgcccgcc gcgccacgat caccgcgccg gagtcgcgcg ccaccttctc ctccaagccg
      601 gtcccgacca ggggtgcctg gggaaagagc agcggcacgc tctgccgctg catgttggag
      661 cccatgagcg cgcggttggc gtcatcgtgc tcgaggaacg gaatcagggc ggcggcaatc
      721 gagaccagct gctcgggcgc cacgtccatg aaatcgatcc gctccggggg aagcaacggg
      781 tagtcgtcac ccttccggca aagcaccagc tgctccccga acgtgccgtc cggattgagt
      841 accgcattgg cctgggcgac ggtgtaatcc tcctcgtcgc tggccgacaa ccagcggatc
      901 tcatcggtca ccttgccgct cttgaccacg cgatacggcg tctcgatgaa gcccaggtcg
      961 ttgatccggg cgtaggtcga gaggctcgta atcaggccga tgttcggccc ttccggcgtc
     1021 tcgatcgggc acatccggcc gtattgcgag tagtgcacgt cgcggacctc gaagcccgcc
     1081 cgctcgcggg tgaggccgcc gggtcccaga gccgagagcc gccgcttgtt ggtcagctcc
     1141 gccagcgggt tcgtctggtc catgaactgc gacagctggg acgagccgaa gaacgcctgg
     1201 atcaccgcac tcaccgtgcg cgcgttgacc aggtcgtcca gcgagatctt ctccggatcg
     1261 gagttgatgc tcatccgctc cttgaccagc cgagccatcc gggacaggcc gaccgagaac
     1321 tggttggcga tcaactcgcc caccgaccgg atccggcggt tgccgagatg gtcgatgtca
     1381 tcggtgaagc cgcgaccgtc gtggagatcg atcaggtaac ggatgatcgc cacgaaatcg
     1441 tcctcggtca gcacggtgtg gttcgggtcg gtcttgagct tcagccgctg gttgatcttg
     1501 tagcggccca cccggcccag atcgtaccgc ttcgggttga agaagagctt ctggagctgt
     1561 tggcgagccg tctccaggtt gggcgcgtcg cccggccgca gcagagcgta gatctgctcc
     1621 agggcctccg cctcgctgtg cgtcgggtct ttggccaacg tgttcttgat cagcggcgac
     1681 tcggagcggc cggccggaag cagcacctcc accttgtgga cgcccgattt gatcagcttc
     1741 ttccgcagga catcggtcag ctcggctcca gcctcggcaa ccacctcgcc ggtcgcggga
     1801 tcggccgcat cgaaggccag catgtgattc tgccggtcgc gggtcgaggt cggctgctcc
     1861 tcctcccgta cgtcgagcgt gctgtagccg gcgaacacgg tgacactctt gatgcccttg
     1921 tgccgcatct cgttgagccg ttcttgggtg agctcgtccc ccaccactcc gaggggctcc
     1981 ccagcccgat cctcgggatt gggcacgtcc gccgcgagca gtgaacccag gacctcacgc
     2041 ttctcctgcc gaccctcgag cttgcccgcg atgttcagct ctttggtggc gaagaacagc
     2101 ttcaggatgt ccgcattgtc gccgtggccg aaggcacgga gcagagcggt ggccgggaac
     2161 ttcttcttct tgtcgatatg gacgtagatc acgtcgtgga tatcgatcgt gaactccacc
     2221 caggagccgc ggaacgggat gatgcgtgcc gagaagagcc gctggccgtt cgggtgagtg
     2281 tcttcctcga acaccacacc gggcgaccgg tggagctggc tgaccacgac gcgctccgcg
     2341 ccgttgatca cgaaggtgcc gaggggggtc atgatgggca gctcgcccag gtagacctcc
     2401 ttctcgatcg cgttcttgag ccgcttctgc ccctcgactt cctcgtacac gtcgagccgg
     2461 agcttggcct tgagcggggc ggcgtaggtc atgtcccgct ccacgcactc ctccaccgaa
     2521 tacttcgcct cgcccagcgc gtagcccagg aactccagct tgtatttctc gtttacgtcg
     2581 gtgatcggga acaggtcccg aaagacgcgc tcgagcgaca cgtcctggcg ggcgccgtga
     2641 acgtcgtccg ggacgagcag ggtctggaac gcggcggtct ggatgtcgag caggtgcggc
     2701 atcggcatgc cgccctctcg cttactgaat gtgattaccg atcgggtctg aggcatcagt
     2761 cactcactct cacgcaacac aaatggcccc aacgcggatg ccccgccgga gcggggtggc
     2821 tacggggcta ggggatgtca ggaacgtaca gagttttaaa gcgtccattc gtctcactga
     2881 aatagggtgg cctagagatc cttcgccgcg ccgggccaga gaccggccac ggttcaggat
     2941 aggctacgcc tacttcagtt cgacgaccgc gccctgctct tctagcttct tcttgaattc
     3001 ctcggcctcc gccttggaca cgccttcctt gatgttgctc ggaacgttgt ccacggcatc
     3061 cttggcttcc ttgagtccca ggctggtgat ctcccggacc gctttgatga cctggatctt
     3121 cttggcgccg ccctccttga ggacgacggt ccattcggtt ttctcttcga ccggcgcagc
     3181 cgcggccgcg ccaccaccgc cgcccccggc agccggagcc gccgcggcag ccgcgatcgt
     3241 gacgttgaac ttgttcttga acgcctcgat cagctccgac agctcgacaa cggtcttgtt
     3301 gccgattgcc tcgaggatct cttcgttact cagcgtggtg gtgggcatcg atgttctctc
     3361 tctcaatccg gtgattgctg ttggcccgca acgcgttgcg ggcgtacact acgaacgctg
     3421 tgcgcgaagc gcctcgaggg cgccgaccat ctgatacagc acgccgttca gcacgccggc
     3481 cagctgggcc acgggggcct gcatggctcc ggccagctgc gacagcagca catctcgcgg
     3541 tggcaggctc gccagccgct tgacctgatc cgccgtgacc ggccggccgt cgaccaggcc
     3601 gatcttgatc gcgggcttct cgaactcgcg gacgaagtcc gcgagcacct tggccgccgc
     3661 gaccgggtcc ttcccggcca gcaccaaccc cgtcggccca gcgagatggt cgtccagagc
     3721 cgtcaccgcg ttggcggcga gcgcccgctg ggccagggta ttcttgacca ccacgtagga
     3781 cacgccggca gcccggagcc gccgacggaa ctccgtcaac cgcagcacgt tgaggccgct
     3841 gaagtcggtg acgtagaggt taggtgagcc gcggaactgc tccgtcaggc tctcgaccgt
     3901 ttcctgccgt tccgtcttgt tcatcggtag accgccgtgt cgagacgcac tcccggcccc
     3961 atggtgctgg acaccgtggc cgagcgaatg taggtcccct tggctgcggc cggcttgacc
     4021 cgggcgatcg tatccatgaa cgcctgaacg ttgtccgcca gctgcgcgct ggagaacgac
     4081 actttgccga ccggcgcgtg cacgttcccc gtcttgtcca ctcggaactc gatcttgccg
     4141 gccttgatct cccgcaccgc ccgggtcacg tccatggtga ccgtcccggc cttcgggttc
     4201 ggcatgaggc cgcgcgggcc aagaacccgg cccagggccc cgagctggcc catcacatcc
     4261 ggcgtggcga caatgacgtc gcattccagc cagccgtcct tgatcttctg gatgtactcg
     4321 acacccacga agtcggctcc ggcggcctcc gcctcacgca ctcgatcgcc ttgggttatc
     4381 accaacaccc gaaccgactt cccggttcca tgcggaagga cgaccgttcc ccggaccacc
     4441 tggtccgcat gcctcgggtc caccccgagg ttcacggcca cgtctactgt ctcgtcgaac
     4501 ttggcaaagg acgagtcctt taccagcgcg accgcctccg ggatcggata ctcccgcgtc
     4561 cgatcgacct tggcaaccgc gcctcggaac ttcttcccac gggtggccat cagtccacca
     4621 cctccaaccc catcgaccgg gcggtgccgg caatcatccg catggcgctg tcgagatcgg
     4681 cggcgttgag atcggccatc ttgatctcgg cgatcttctt gacctgggca cgggtgaccc
     4741 gccccacctt gacgcggtta ggctgcccac tccccttctc gatccccgcc tccttcagca
     4801 ggagattcgg cgcaggtggg gtcttggtaa tgaagctgaa tgtccggtcc gcgaagatgg
     4861 tgacgacgac cgggatgacc atcccgctct gcgcctgggt ccgcgcgttg aactg
//
LOCUS       DASYRV010000144         2414 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2131231, whole genome shotgun sequence.
ACCESSION   DASYRV010000144 DASYRV010000000
VERSION     DASYRV010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2414
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2131231"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..285
                     /locus_tag="VGQ24_03635"
     CDS             <1..285
                     /locus_tag="VGQ24_03635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453956.1"
                     /translation="EIGSQSDFPPTLLGRLGLPGGEQYRFGRDLFVPSPTPFAFYGFE
                     GGFGLVTGEGELVWERRAGRVTSSQGAVGASELALGRALLQLAFQDYLNR"
     gene            complement(389..2035)
                     /locus_tag="VGQ24_03640"
     CDS             complement(389..2035)
                     /locus_tag="VGQ24_03640"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEV8453957.1"
                     /translation="MQARPMAKYPISSTVDFVIVGSGAAGGVLAKQLSTRGYSVVVLE
                     AGPRLGPGDFKHDEFSYWLNGDLGPKTPVTWRQTEKDTARVGGGGIFRASIVGGSSVH
                     FTANFWRLHEIDFIERSKLGAIPGANLADWPIGYADLEPYYTMVDWEVGVSGTPGPFD
                     PPRSRPYPMPPLPVKSSGVLFDRGCQKLGLHSQPSPMAILSQPFNGRNACQHCGYCIG
                     FGCEFGAKSSSLASVIPVAEATGKCEIRPNSYASKVELDAKGRAVGVVYFDAEKREQL
                     QRAKAVILSCNGAETPKLLLMSTSSQFPNGLANSSGYVGKHLMFNGNTGTMALFEHPL
                     NEYKSVQVTRVIHDFYDSDPKRGYYGGGGIDARFQQYPIVFALGALPPDAPGWGREYK
                     RLLGQYFNRIMMCAGHTTSLPVESNNVTLDPTEKDSWGLPALRITYKDHDDDLKIMQF
                     MVDRSKEILDAAGAQKVWSFPVQVSGGTAHLLGTCRMGNDPKTSVIDGNHRTHDVRNL
                     FLCDGSSMVTSGRGQPTMTIMALAFRAGERIANLAKRGEI"
     gene            complement(2039..>2414)
                     /locus_tag="VGQ24_03645"
     CDS             complement(2039..>2414)
                     /locus_tag="VGQ24_03645"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HEV8453958.1"
                     /translation="DGTPGAKEAGVILFIDKSLATFAAPQKDFMLGALADLNKKITAK
                     WPGTTSFSALTAAQQDEYLKSIEQTPFFGQTRFASCVGMFGNPSYGGNQGEAGWKLLG
                     FESHGIYQPPFGYYDAEVRKGG"
BASE COUNT          386 a          767 c          812 g          449 t
ORIGIN      
        1 gagatcggga gccagagcga tttcccgccc acgctgctcg gccggctggg gctcccggga
       61 ggcgagcagt accgcttcgg gcgcgacctc ttcgtcccga gccccacgcc ctttgcgttc
      121 tacggcttcg agggcggctt cggcctggtc accggggagg gggagctggt ctgggagcgg
      181 agggcaggcc gggtgacctc gtcgcagggg gcggtcggcg cctcggagct cgcgctgggc
      241 cgcgccctgt tgcagctggc atttcaggat tatctgaaca ggtagcaggc agcaggcggc
      301 agggagttaa ggctcccact gttcactgtt caccgttcac tgttcactgt tcactgttca
      361 ctgtttactg ttcactggtc cccgtacttc agatctctcc ccgcttcgcc aggttcgcga
      421 tccgctcccc ggcccggaac gccagcgcca tgatcgtcat ggtgggctgg ccgcgacccg
      481 acgtcaccat gctgctcccg tcgcagagga agaggttgcg cacgtcgtgg gtacggtgat
      541 tgccgtcgat caccgaggtt ttcgggtcgt tgcccatgcg gcaggtcccc agcaggtggg
      601 cagtaccgcc cgagacctgg accgggaagc tccagacctt ctgcgcgccg gccgcgtcga
      661 ggatctcctt ggaacgatcg accatgaact gcatgatctt gagatcgtcg tcatggtcct
      721 tgtaggtgat ccgcagcgcg ggcaggcccc aggaatcctt ctcggtggga tccagcgtca
      781 cgttgttgct ctcgaccggg agcgaggtgg tgtggccggc acacatcatg atgcggttga
      841 agtactggcc gagcaggcgc ttgtactcgc ggccccagcc gggcgcgtcc ggcggtaggg
      901 cgccgagggc gaagacgatg gggtactgct ggaagcgggc atcgatgccg ccgccgccat
      961 agtagccgcg tttggggtcg ctgtcgtaga aatcatggat cacccgggtg acctgtacgc
     1021 tcttgtactc gttgagcggg tgctcgaaca gcgccatcgt cccggtgttc ccgttgaaca
     1081 tcagatgctt gccgacgtag ccgctggaat tggccagccc gttggggaac tggctcgacg
     1141 tggacatcag cagcagcttc ggggtctcgg caccgttgca ggagagaatc accgctttgg
     1201 cgcgctgcag ctgctcgcgc ttctcggcgt caaaatagac cacgccgacg gcacggccct
     1261 tcgcgtccag ctccaccttg gacgcatagc tgttggggcg gatctcgcac ttccccgtgg
     1321 cctccgccac ggggatgacc gacgcaagcg aggagctctt ggcgccgaac tcgcatccga
     1381 agccgatgca gtagccgcag tgctggcacg cgttgcggcc gttgaacggc tgggagagga
     1441 tcgccatggg cgagggctgc gagtgcaggc cgagcttctg gcagccccgg tcgaataaca
     1501 cgccggagga tttgaccggc agcggcggca tcggatacgg acgggatcgc ggtgggtcga
     1561 agggtcccgg cgtccccgaa acgcccacct cccagtcgac catggtgtaa tacggctcga
     1621 ggtccgcgta accgatgggc cagtccgcga ggttggcgcc cgggatcgcg ccgagtttgc
     1681 tgcgctcgat gaaatcgatc tcgtgcagcc gccagaaatt ggcggtgaag tgcacactgc
     1741 tgccccccac gatgctcgcc cggaaaatgc cgccaccgcc cacccgggcg gtgtcctttt
     1801 cggtctggcg ccaggtgacc ggcgtcttgg gccccaggtc tccattcagc cagtaggaga
     1861 actcgtcgtg cttgaaatcg ccggggccca gccgcggccc ggcctccagc accaccaccg
     1921 agtacccgcg ggtggagagc tgcttggcga gtacgccgcc ggccgctcct gagccgacga
     1981 tcacaaaatc cactgtggag ctgatcgggt atttggccat cgggcgtgct tgcatggctc
     2041 agcccccctt ccggacttcg gcgtcgtagt agccgaaggg cggctgataa atcccgtggg
     2101 actcgaaacc gagcagcttc catccggcct cgccctggtt gccgccgtag gacggattgc
     2161 cgaacatgcc gacacagctc gcgaagcggg tctgaccaaa gaacggggtc tgttcgatcg
     2221 acttgaggta ctcatcctgt tgcgcggcgg tgagcgccga gaaggaggtg gtccccggcc
     2281 acttggccgt gatcttcttg ttcaggtccg ccagggcgcc gagcatgaag tccttctgcg
     2341 gcgcggcgaa ggtcgccagg gacttgtcga taaagaggat cactcccgct tccttggcgc
     2401 ccggagtccc gtcc
//
LOCUS       DASYRV010000145         1955 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2131347, whole genome shotgun sequence.
ACCESSION   DASYRV010000145 DASYRV010000000
VERSION     DASYRV010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1955
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2131347"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..198)
                     /locus_tag="VGQ24_03650"
     CDS             complement(<1..198)
                     /locus_tag="VGQ24_03650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453959.1"
                     /translation="MAKVREKFSRIQRCPGLAREDQSVVTPGKTGRHLVFSLPGVMLA
                     QLGQDLRGQCQRPPRTGSFQLA"
     gene            200..481
                     /locus_tag="VGQ24_03655"
     CDS             200..481
                     /locus_tag="VGQ24_03655"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEV8453960.1"
                     /translation="MCNRAGLGHWHPHELRHSGASLMLAQGTPLHVVSEILGHASITI
                     TKDVYVHLVEGDRRAVAASMSQALFGPESAVVAPNMAPTGTKKTPPRSG"
     gene            complement(498..570)
                     /locus_tag="VGQ24_03660"
     tRNA            complement(498..570)
                     /locus_tag="VGQ24_03660"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(535..537),aa:Arg,seq:acg)
     gene            complement(561..686)
                     /locus_tag="VGQ24_03665"
     CDS             complement(561..686)
                     /locus_tag="VGQ24_03665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453961.1"
                     /translation="MASPHGYHVRLPAAPVRAVAMLLAGTAGAAGAVDYRGIRRS"
     gene            746..1255
                     /locus_tag="VGQ24_03670"
     CDS             746..1255
                     /locus_tag="VGQ24_03670"
                     /inference="COORDINATES: protein motif:HMM:NF016840.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF664 domain-containing protein"
                     /protein_id="HEV8453962.1"
                     /translation="MTSAELLADAFGRIQETVHDVVRGLTPEQLAFRIDSDANSIAWL
                     VWHLTRIQDDHVADVALAEQVWTSGGWMERFGLPFGRRAHGYGHSSAEVAAVRVDSAD
                     LLTGYYDAVHEQTIRFVEGLTDADLPRIVDEGWDPPVTLGVRLVSVISDDLQHAGQAA
                     FIRGIIERR"
     gene            1408..1914
                     /locus_tag="VGQ24_03675"
     CDS             1408..1914
                     /locus_tag="VGQ24_03675"
                     /inference="COORDINATES: protein motif:HMM:NF039203.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5709 domain-containing protein"
                     /protein_id="HEV8453963.1"
                     /translation="MPDEPRHESADLEDYEVQDASDTLEGDPGDDPLDRGVIAPQHWS
                     AGMKFGSTAAEQEEGESLDQLLAEEEPDITAEVDDERLEDIAGDQDAGDEDVDGLLLD
                     DGPDPRAGRLVAEDEGAHPAAEADLVAQDVGIDGAAASAEEAAVHVVEDDDTDIRSDD
                     DTDIRSDE"
BASE COUNT          348 a          620 c          690 g          297 t
ORIGIN      
        1 ggcgagctga aaactccccg ttcgcggcgg tcgctggcac tgaccccgca gatcctggcc
       61 aagctgcgcc agcatcacac ccggcaagct gaacacaaga tggcggccgg tcttgcctgg
      121 cgtgactacg gattgatctt cgcgagcgag accagggcac cgctggatcc gggagaactt
      181 ctcgcgcacc ttcgccaagc tgtgcaacag ggccgggctt ggtcactggc acccgcacga
      241 gctgcggcac tcgggcgcct cgctgatgct cgctcaggga acgccgctgc atgtggtgtc
      301 ggagatcttg gggcacgcca gtatcacgat cacgaaagac gtatatgtgc acttggtgga
      361 aggggaccgg cgggccgtcg ccgcatccat gagccaggcg ctatttggcc ccgaatcggc
      421 cgtggtggct cccaacatgg ctcccaccgg cacgaaaaag acccctcccc gaagcgggta
      481 ggggccgttg acctgggcgc gctcggaggg actcgaaccc ccagccttct gatccgtagt
      541 cagatgctct atccgttgag ctacgagcgc cggatgcccc gatagtctac ggcacctgcc
      601 gcgccggccg tcccggcaag cagcatcgcc accgccctca ccggtgcggc aggcaggcgg
      661 acatgatagc cgtgaggtga ggccacggac ggcacagacc agcggacgcc acaggccagc
      721 agacacggga cgagagggcc acacgatgac cagcgctgag cttctcgccg acgcgttcgg
      781 caggatccag gagaccgtcc acgacgtcgt tcgcgggctg acgccggagc agttggcatt
      841 caggatcgac agcgacgcga actcgatcgc ctggctggtc tggcacctga ccaggatcca
      901 ggatgaccac gtcgcagacg ttgcgctggc agagcaggtc tggacgtccg gcggctggat
      961 ggagcggttc gggctgccgt tcggcaggcg ggcacatgga tacggccaca gctcggccga
     1021 agttgccgca gtccgcgtgg attcggcaga cctgctgacc ggctattacg acgcggttca
     1081 cgagcagacg atccgattcg ttgagggcct gaccgatgcc gatcttcccc gcatcgtgga
     1141 cgaggggtgg gatccgccgg tcacgctcgg cgtgcggctg gtaagcgtca tttccgatga
     1201 ccttcagcac gctggccagg ctgccttcat ccgcggcatc atcgagcggc ggtagtcggc
     1261 gcgctgtgac ggccccgggc tgcgaggaca ccgtgagatt ccgctatctg atgaggtgcc
     1321 cggcctgtgc cgatcggccg gcgggtagct tgggcttatg ggctctgatt cgccttgccc
     1381 gtgagagcaa tggagaggag ctgagggatg cccgacgagc cccgccacga gtctgctgat
     1441 ctagaggact atgaggtcca ggacgcgtcc gacacgctgg agggagatcc gggggacgac
     1501 cccctcgacc ggggggtgat cgccccgcaa cattggtcgg ccgggatgaa gttcggctcg
     1561 acggccgcgg agcaggagga aggggaatcc ctcgaccagc tgctcgccga agaggagcca
     1621 gacatcaccg ctgaggtcga cgacgagcgg ctcgaagata tcgccgggga ccaggatgcg
     1681 ggggatgagg acgttgacgg gctcttgctc gacgacggcc cggatcctcg cgcgggccgg
     1741 ctggtggccg aggacgaggg ggcccatccg gccgccgagg ccgacctggt cgcgcaggac
     1801 gtggggatcg atggcgccgc ggcgagtgcc gaggaggcgg cggtccacgt ggtggaagac
     1861 gacgacaccg atatccgctc ggacgacgac accgatatcc gctcggacga gtgaccagcg
     1921 accgcaagct ctgcgtcccg gtcgtcgtcc acgtg
//
LOCUS       DASYRV010000146         7428 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1717202, whole genome shotgun sequence.
ACCESSION   DASYRV010000146 DASYRV010000000
VERSION     DASYRV010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7428
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1717202"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1282
                     /gene="ftsH"
                     /locus_tag="VGQ24_03680"
     CDS             <1..1282
                     /gene="ftsH"
                     /locus_tag="VGQ24_03680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEV8453964.1"
                     /translation="FSMSGSDFVEMFVGVGASRVRDLFEQGKAHAPCIIFIDEIDAVG
                     RHRGAGLGGGHDEREQTLNQLLVEMDGFESNDGVILVAATNRPDVLDPALLRPGRFDR
                     TIVVDAPDVRGREGILRVHTRKIPLAGDVRLDTIAKGTPGMAGADLANLVNEAAVLAA
                     RRNKTLVDMSDFEDAKDKVMLGVERRSLVLTEDERTLTAYHEAGHAIVATKIPGSDPI
                     HKVTIVPRGRALGLTASLPEVDRHNYTKDWLIGSLAMFFGGRVAEEIVFGPDKITTGA
                     GNDIERATGLARRMVTQFGMSELIGPLAVGDKEQEIFLGREFAQRREISERTAQMVDD
                     EVKRLVDEAYARATSILTENRALLDRIAQALLDRETIDREDLDRLVKNQPLPPRPLPP
                     TEPAVAPSNTAAKPGGTPARAPILGAPPAEPAGA"
     gene            1279..2454
                     /gene="folP"
                     /locus_tag="VGQ24_03685"
     CDS             1279..2454
                     /gene="folP"
                     /locus_tag="VGQ24_03685"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR01496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEV8453965.1"
                     /translation="MNVTPLALHSPRAVRDALRCHGWDERLADTAADSLNTVAFHLTG
                     LDQDALEALVPFAGGLGLEVLTGDSWAILSGSRSRVSALARPWTVPQPLAQVAAGIGR
                     AMPGETPGHWQTARGSLSLDQPLLVGILNVTPDSFSDGGRFAGTEAALAHAGELVRAG
                     AMVIDVGGESTRPGRTVEVPAAEELRRVLPVIGAVVREYPSVFVSIDTVKAAVARAAL
                     DAGAAVVNDVSALRLDPAMGATVAAAGAGVVLMHSRGSILEVASYTHADYGGDVVGGV
                     VSELRAALDRAAAGGIGPDATVIDPGFGFSKTVEQNTVLFDQLAALQALGRPILVGPS
                     RKRFLGSVTGLPVEERDRATALACALAYERGARLFRVHDVAAAREALSLARAVGGMP"
     gene            2514..4811
                     /locus_tag="VGQ24_03690"
     CDS             2514..4811
                     /locus_tag="VGQ24_03690"
                     /inference="COORDINATES: protein motif:HMM:NF022481.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2723 domain-containing protein"
                     /protein_id="HEV8453966.1"
                     /translation="MAALVLLVYVLTLAPTVTFWDAGELIAAAKTLGIPHPPGTPLFV
                     MIAHVWAMLFPFGEYAVRTNLLSALLSAAGAGFFFLIAYESIRALTADLEQRTARLLR
                     LGAAAAAALVGAFTFTNWQNSNETEVYAVATFTIAAMGWLAHVWRRYRGTARAPRVLL
                     LIVYLAGISIGNHLLALLAGPAVIMFMASTLRSAPAADPIQRRAEWAQVAVVAGVWAL
                     LIGTGLGSSGLIAMGGLCFLGAAVYAFLGGAGGFALLTLLIAAIGVTPYLYLYIRSAQ
                     NPPINEAAPATVEALLAVIRRAQYPPRTPLDDPTVSHGPDNPGRTLALFGIQLADYFV
                     YFVWQWAKSAAASVQVVMTLVFFSLGLRGALAQRRADRPAWWLLLLLFLVTGLGLVIY
                     MNFRPGFARWFDSYPSGTAHEVRERDYFFVVSFIIWGIWAGMGLLVLARGLLARWATA
                     RRFAPVLVLLAAVPLTLNWSAASRRHGPDARLAADFGYDLLNTVPPYGILFTYGDNDT
                     FPLWWAQEVAGIRQDVTVICLALANTDWYMRQLRDAPVRPVNQNALPPIWRGALIPRP
                     DRPLHTMTDSMIAVAMNGYVVPEDQRVSLGPLSRILKAGSFLLPNDILTLGVVQQNVA
                     RRPIVWAITSGKGFGGLADYVVQQGLGFALRTAKPDSASPSLDFRRLAGAPLDMPTTD
                     RLLWETYRYAGLLEGDVTKLESTSASIASTLSLPYTQLAYAYSARGQYDKMERALDRA
                     MQLTPNPALRAALAELRVRGTDSEK"
     gene            4880..5566
                     /locus_tag="VGQ24_03695"
     CDS             4880..5566
                     /locus_tag="VGQ24_03695"
                     /inference="COORDINATES: protein motif:HMM:TIGR00044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEV8453967.1"
                     /translation="MDFPGLPARLAAVRDAVARHQEVGGWSHGVRIVAVTKTHGPEAV
                     RAALAAGLREIGENRVQEALQKQEALLDVSVEWHLVGTLQRNKAKYAAGRFVLIHSVD
                     RADLAAELDRRAAPGSRQPILVQVNCSAEPQKGGVAPASLPVLLDQLRLLDRIEVQGL
                     MTMSALTDDQTEQRRAFRLLRELRDASERSGHRLPELSMGMSGDYPIAVEEGATMIRL
                     GTILFGERTA"
     gene            5563..6084
                     /locus_tag="VGQ24_03700"
     CDS             5563..6084
                     /locus_tag="VGQ24_03700"
                     /inference="COORDINATES: protein motif:HMM:NF016959.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DivIVA domain-containing protein"
                     /protein_id="HEV8453968.1"
                     /translation="MTDDHAFHLTPLDVRSQEFARALRGYNRAQVDEFKLAISEELER
                     LLRDRAQNEERLRSAQDQLRAYQDRERAMNEALVAAQQLRVDSREQAEREAELVLREA
                     RAEAEQIMERARQEEAAVRVRSDGAARQFTAYVASFRALLERHLGEVDGLQRRPRADM
                     PELPDETSSGGQR"
     gene            6081..6914
                     /locus_tag="VGQ24_03705"
     CDS             6081..6914
                     /locus_tag="VGQ24_03705"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004731 - purine-nucleoside phosphorylase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HEV8453969.1"
                     /translation="MTATMSLFDRIQEAAGVMRRRTKLRPDVAIVLGTGLGGLAAEIE
                     VEAAIPYEEIPGFPLSTVESHAGRLLLGRLGQRPVVAMQGRFHRYEGYDLAVVTFPVR
                     VMQALGARFLFVSNACGGMNPLWSPGDLVLLSDHINLLGDNPLIGANDERLGPRFPDM
                     SAPYDPELRALARTTALELGITLREGVYVAVPGPNLETRSEYRMLRMMGADVVGMSTV
                     PEVIVAVHAGMRTLGISIITDQCLPDALEPADIGRIIATASRAEPSLTRLIASLAERV
                     S"
     gene            6914..>7428
                     /locus_tag="VGQ24_03710"
     CDS             6914..>7428
                     /locus_tag="VGQ24_03710"
                     /inference="COORDINATES: protein motif:HMM:NF012361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEV8453970.1"
                     /translation="MAFPTWPDLTPDALEERQLALWTAEGLFQRTIEARRDGPPFVFY
                     EGPPTANGRPGIHHVFSRTIKDLVCRFHAMQGESVTRIAGWDTHGLPVEIEVEKELKL
                     SGKKDIERFGVQKFNARARKSVFKYQEEWETLSDRIGYWLDYEHPYITCSNDYIESVW
                     WLLQRLHQRNLL"
BASE COUNT         1169 a         2457 c         2502 g         1300 t
ORIGIN      
        1 tttctcgatg tccggttccg acttcgtcga gatgttcgtc ggggtgggcg cctcacgggt
       61 tcgcgatctg ttcgagcagg gcaaggcaca cgcgccgtgc atcatcttca tcgatgagat
      121 cgatgcggtg ggacgccacc gcggcgcagg cctgggcggc ggtcacgacg agcgggagca
      181 gaccctcaat cagcttctgg ttgagatgga tggcttcgag tccaatgacg gtgtgattct
      241 cgtggcagcg accaaccggc ccgacgtgct cgatccggcg ctgctccggc ccggtcgctt
      301 cgaccggacg atcgtcgtcg atgcacctga tgtacgcggc cgcgaaggca tcctccgggt
      361 ccatacccgg aagatcccgc ttgcagggga cgttcggctc gacaccatcg ccaaggggac
      421 acccggcatg gcgggagccg acctcgccaa tctggtcaac gaggcggcgg tactggcggc
      481 ccggcgcaac aagacgctgg tcgatatgtc ggacttcgag gacgccaagg acaaggtcat
      541 gctcggcgtc gagcgccgga gcctggtgct caccgaggac gagcggactc tgacggccta
      601 ccacgaggcg ggacacgcga tcgtggccac caagatcccg gggagcgatc cgatccataa
      661 ggtcaccatc gtgccccgcg gccgcgcgct cggtctcacg gcctcgctgc ccgaggtgga
      721 ccggcacaat tacaccaagg actggctcat cggcagcctt gcgatgttct tcggtggacg
      781 ggtcgccgaa gagatcgtgt tcggccccga caagattacg actggggcag ggaacgacat
      841 cgaacgcgca accgggctgg cccgccggat ggtcacccag ttcggcatga gtgagctcat
      901 cgggccgctc gccgtgggag acaaggaaca ggagatcttc ctgggccgtg agttcgctca
      961 acggcgggag atttccgagc gcaccgccca gatggtggac gatgaggtga agcggctggt
     1021 ggacgaagca tacgcgcggg ccacgagcat tcttacggag aatcgcgcgc tgctcgatcg
     1081 catcgcccag gcgttgctcg atcgtgagac gattgaccgc gaggacctgg accggttggt
     1141 caagaaccag ccgctcccgc cgcggcccct gccgcccacc gagccggccg tcgcaccgag
     1201 caacactgcg gccaagccgg gcggtactcc ggcccgtgca ccgatcctcg gagcgccccc
     1261 ggctgaaccc gccggcgcgt gaatgttacg ccgctggcgc tccactcccc ccgggcggtg
     1321 cgcgacgcgc tccgctgtca cgggtgggat gaaaggctgg cggatactgc tgccgattca
     1381 ctcaacacgg tcgcgtttca tctgaccgga ctggaccagg atgccctcga ggccctggtc
     1441 ccgttcgcag gtggcctcgg gctggaagtt cttaccggcg attcctgggc gatcctctcc
     1501 ggcagccgct cccgagtgag cgcgctggcc cggccctgga ccgtgcctca gcccctcgct
     1561 caggtggccg ccggtatcgg ccgggcgatg cctggcgaga ccccgggaca ctggcagacc
     1621 gcccgggggt cgctctcact cgaccagcct ctcctggtcg gcatcctcaa cgtcaccccc
     1681 gatagcttca gcgatggcgg ccgcttcgcg ggcaccgagg cggcgctcgc gcatgccgga
     1741 gagctggtgc gcgccggcgc gatggtcatc gatgtcggcg gggagtccac ccgacccggg
     1801 cggacggtgg aggttcctgc cgccgaagag ctccgccggg tgctcccggt gatcggagca
     1861 gtggtgcgcg agtatccctc ggttttcgtg tcgatcgata ccgtgaaggc ggccgtggcg
     1921 cgcgccgcgc tcgatgccgg agcggccgtg gtgaacgatg tctcggcgct ccggctcgac
     1981 cctgccatgg gggccaccgt tgcggcagcg ggggcgggcg ttgtgctgat gcattcgcgc
     2041 ggctccattc tcgaggtcgc gtcatatact catgctgatt atggcggaga cgtggttgga
     2101 ggcgtggtga gcgagctacg cgcggcgctc gatcgggccg cggccggcgg gatcggcccg
     2161 gacgcaaccg tcatcgatcc ggggttcggc ttctccaaga ccgtggagca gaacaccgtc
     2221 ctcttcgatc agctcgccgc gctacaggcg ctcggccgcc ctatcctggt tggcccgtca
     2281 cggaagcgct ttctgggctc ggtcactggt ctgccggtgg aagagcgcga tcgcgccacc
     2341 gcgctcgcct gcgcactcgc ctacgagcgg ggtgcccgtc tcttccgggt ccatgatgtc
     2401 gccgctgcgc gtgaagcgtt gagcctggcc cgggcggtgg gaggcatgcc ctgaccccac
     2461 cgaggtatgg cgaagtcgcc ggtacccgtc cgccctattg ggccgcggtc gccgtggccg
     2521 cgctggtgct cctggtctac gtacttactc ttgccccaac cgtgactttc tgggacgccg
     2581 gcgagctcat cgcggcggcg aagaccctcg gcattcccca cccgccgggc actccactat
     2641 tcgtcatgat cgcccacgtg tgggcgatgc tgttcccctt cggcgagtat gccgttcgta
     2701 ctaatctcct gagcgccctt ctcagcgcgg cgggcgccgg cttcttcttc ctcattgcct
     2761 acgagtcgat ccgcgcattg accgcggacc tggagcagcg caccgctcgg ctgctgcggc
     2821 tgggcgcggc ggcggcggcg gccctggtcg gcgcgttcac ctttaccaac tggcagaact
     2881 cgaacgagac cgaagtctac gccgtcgcga cgttcaccat agcggcgatg ggctggctgg
     2941 ctcacgtatg gcgccgctac cggggaaccg cccgagcacc ccgggtgctg ctgctgatcg
     3001 tgtatctcgc cggcatctcg atcggtaacc acttgctggc cctgctggcg ggtcccgctg
     3061 tgatcatgtt catggccagc acgctccgga gcgcacccgc ggcagatccg atccaacgac
     3121 gagccgagtg ggcgcaggtg gcggtggtgg ctggtgtgtg ggcgctattg atcggcaccg
     3181 gtcttggcag cagcgggttg atcgcaatgg gggggctctg ttttctcggc gccgccgtct
     3241 acgcctttct gggtggggca ggtgggttcg ccctgctcac cctgctgatc gccgccatcg
     3301 gcgtcacccc atacctgtac ctttatatcc gctcggccca gaatccgccg atcaatgagg
     3361 ccgccccggc cacggtcgag gcgcttctcg ctgtcattcg tcgagcgcag tatccgcccc
     3421 gcaccccgct cgacgatccc accgtctcgc atgggccaga caatccgggt cgtaccctgg
     3481 cgctgttcgg tatccagctg gccgactatt tcgtgtattt cgtctggcaa tgggccaaat
     3541 cggcggcggc gtcggtccag gtagtcatga ccttggtctt cttctcactg gggctgcgcg
     3601 gtgccctggc ccagcgccga gccgaccgcc ccgcctggtg gctcctgctg ctccttttcc
     3661 tggtcactgg actcggtctg gtgatctaca tgaacttcag gccgggcttc gcccgatggt
     3721 tcgacagcta cccctccggt accgcgcacg aggttcgcga gcgggactac ttcttcgtcg
     3781 tcagcttcat tatctggggg atctgggccg gcatggggct gctcgtgctc gcccgagggc
     3841 tgctcgccag atgggccact gcgcggcgct tcgcaccggt cctggtcctc ctggcggcgg
     3901 tgccgctgac tctcaactgg agcgcggcgt ccaggcgcca cggacccgat gcccgcctcg
     3961 cggccgactt tggatacgac ctcctgaaca cggtgccccc atacgggatc ctctttacct
     4021 acggcgacaa cgatacgttc cccctctggt gggctcagga ggtggcaggg atccggcagg
     4081 atgtcaccgt gatttgcctg gccctggcga acaccgactg gtacatgcgc cagctgcggg
     4141 atgctccggt gcgaccggta aaccagaacg ccttaccgcc gatctggcgc ggcgctctga
     4201 tcccgcggcc ggatcggccg ctgcacacga tgacggattc gatgatcgcc gtcgccatga
     4261 acgggtacgt cgtccccgag gatcagcggg tcagcctggg cccgttgagc cgtatcctca
     4321 aggcaggctc gttcctcctg ccgaacgaca ttctcaccct gggcgtggta cagcagaacg
     4381 tcgcacggcg ccctatcgtg tgggcgatca cgtccgggaa aggatttggc gggctggccg
     4441 actacgtcgt gcagcagggg ctcggcttcg cgctccgtac cgcaaagcct gacagcgcgt
     4501 cgccgtctct ggacttccgc cgcctggcag gcgcgcccct ggacatgccc acgaccgatc
     4561 ggctcctgtg ggagacctat cggtacgccg gcctgttgga aggcgatgtc accaaactcg
     4621 agagcaccag cgccagcatc gcgtccacgc tgtcgctccc gtatacgcag ctggcctacg
     4681 cgtacagcgc gcgaggtcag tacgacaaga tggagcgagc tctggatcgt gccatgcagc
     4741 tgactcccaa cccggcgttg cgggctgcgc tggccgagct cagggtcaga ggcaccgaca
     4801 gcgagaagtg attaggccca gcgcggaggg cttggagcca ccttcaataa cggaccatcc
     4861 ccagataaat tagagggtta tggacttccc aggcctcccg gcccggttgg ccgctgtgcg
     4921 cgatgcggtg gctcgacacc aggaggtcgg cgggtggagc catggcgtgc gcatcgtggc
     4981 tgtcaccaag acgcacggtc ctgaagcggt gcgtgctgcc cttgccgccg ggctcaggga
     5041 aataggcgag aaccgggtgc aggaggcgct gcagaaacag gaggcgctgc tcgatgtatc
     5101 cgtcgagtgg cacctagtcg gcacgttgca gcgcaacaag gccaaatacg ccgccgggcg
     5161 attcgtcctc attcactcgg tggatcgcgc cgacctcgct gccgagctcg atcgccgggc
     5221 agccccgggg agccgtcaac cgattctggt acaggtcaac tgttcggctg agccgcagaa
     5281 gggcggggtg gcgcctgcgt cccttcccgt gctgctggat cagctccggc tgctggatcg
     5341 catcgaggtg cagggactca tgaccatgag tgccttgacc gacgatcaga ccgagcagcg
     5401 ccgtgcgttt cgcctcctgc gggagctgcg tgatgcatcg gagcgttccg ggcaccgcct
     5461 tcccgagctc tcgatgggaa tgtccggcga ttacccgata gcagtagagg aaggtgcaac
     5521 gatgatccga ctgggaacga ttctgttcgg ggaacgtacg gcatgaccga cgatcatgcg
     5581 tttcacctga ccccgctcga tgtccggtcc caggagtttg cccgggcgct ccgcggctat
     5641 aatcgggcgc aggtcgacga gttcaagctc gcgatctcgg aagagctcga gcggctgctg
     5701 cgcgaccgag cccagaacga ggagcgtctg cgcagcgcgc aggaccagct ccgcgcctat
     5761 caggaccgcg agcgggccat gaacgaggcc ctcgtggcgg cgcagcagct cagggtggac
     5821 agcagggaac aggccgagcg tgaagcggag ctggtgctcc gcgaggcccg agcggaggcg
     5881 gagcaaatca tggagcgggc ccggcaggag gaggctgcgg tgcgggtgcg gtccgatggc
     5941 gcggcgcgac agtttaccgc gtacgtggcg agctttcgcg cgcttctcga gcgacacctc
     6001 ggcgaggtgg acgggctcca gcgccgcccg cgcgccgata tgcccgagct gcccgatgag
     6061 acctcgtccg gcgggcagcg gtgaccgcca ccatgtcgct gttcgaccgg atacaggagg
     6121 ccgccggagt catgcggcgg cgcaccaagc tccggcccga cgtcgcgatc gtgctgggta
     6181 cgggcttggg cgggcttgcc gccgagatcg aggtcgaggc cgccatcccg tacgaggaga
     6241 tcccaggctt cccgctgtcg accgtcgaaa gccatgcagg ccgcctgctg ctcgggcgcc
     6301 tggggcagcg accggtagtc gcgatgcaag ggcgcttcca tcgctacgag gggtacgatc
     6361 tcgccgtggt gacgttccct gtccgggtca tgcaggccct gggtgcgcga tttctcttcg
     6421 tgtccaacgc ctgcggcggc atgaacccgc tctggagtcc aggcgacctg gttctgctca
     6481 gtgatcacat caacctgctg ggcgacaatc cgctcatcgg agccaacgac gaacggctcg
     6541 gcccccgctt tcccgatatg tcggcgccct atgatcctga gctccgcgcc ctggctcgga
     6601 caacggcact ggagctcggc atcacgctga gagaaggagt gtacgtggcg gtgccggggc
     6661 ccaatctgga gacccgctcc gagtatcgca tgcttcggat gatgggagcc gacgttgtgg
     6721 gaatgtctac cgtaccggaa gtgatcgtgg cggtgcacgc ggggatgcgg acacttggca
     6781 tctcgatcat caccgaccag tgcctacccg acgccctcga gccggccgac atcggacgca
     6841 tcatcgccac cgccagccgg gcggagccgt cgctgactcg gctcatcgcc agcctggcgg
     6901 agcgcgtgtc ctgatggcgt ttccaacctg gcccgatctc acgccggacg cgctggagga
     6961 acgccagctc gcgctctgga cggcggaggg tctgtttcag cggaccatcg aggcccgccg
     7021 ggacggtccc ccattcgtct tctacgaggg ccccccgacc gccaacgggc ggcccggcat
     7081 ccaccacgta ttctcccgta cgatcaaaga tctggtctgc cggttccacg ccatgcaagg
     7141 cgagtcggtg actcgcatcg cggggtggga tacgcacgga ctgccggtgg agatcgaggt
     7201 ggagaaggag ctaaagctca gcgggaagaa agatatcgag cgcttcggtg tgcagaagtt
     7261 caatgcccgc gcccgcaaga gcgtcttcaa gtaccaggag gaatgggaaa cgctctcgga
     7321 tcgaatcggg tactggctcg attacgagca cccctacatc acctgcagca acgactacat
     7381 cgagagtgtt tggtggctgc tccagcggct gcaccagcgg aacctgct
//
LOCUS       DASYRV010000147         1791 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_469755, whole genome shotgun sequence.
ACCESSION   DASYRV010000147 DASYRV010000000
VERSION     DASYRV010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_469755"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..666)
                     /locus_tag="VGQ24_03715"
     CDS             complement(<1..666)
                     /locus_tag="VGQ24_03715"
                     /inference="COORDINATES: protein motif:HMM:NF014766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEV8453971.1"
                     /translation="MPHALRMDVEFLELRTKHPFIIARGGQSDYRTAWVRLTDGDGLE
                     GWGEAAPSKFYGETADSVAAALEFYGSALPDDPFNLEDAERRWETMLRGNAAARAALS
                     AALHDLVGKRLGVPVYRLWGLDPCMAPKSTFTIGLDTPDRIKAKVREAEQFPILKVKL
                     GTDRDLEILRAIREATDKEIRVDANCGWTVKGAIRMLPVLDEFGVTVLEQPLPPEDLD
                     GLAV"
     gene            complement(747..1643)
                     /locus_tag="VGQ24_03720"
     CDS             complement(747..1643)
                     /locus_tag="VGQ24_03720"
                     /inference="COORDINATES: protein motif:HMM:NF013046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase"
                     /protein_id="HEV8453972.1"
                     /translation="MPVTVFTHSSCLKHDPGPDHPETPARLRAILQWLRKDQSVAVQE
                     AESAGLDPLLAVHPRAYLASLQAMSARGGGALFLDTVLSRDSWAAVLGATGAVLAAVD
                     HALDDRAHGFAAVRPPGHHALAARGMGFCLVNNVVVAARHAQRAGRERVLIIDWDVHH
                     GNGTQALVETDPTVRYVSLHQHPWYPGTGAAEERGVGNIFNVPRGPGKPPALYVGDLW
                     AAVVAATTGWSPALVLVSAGFDAMAGDPLGGFTLEPEHYTDLTTRLRDRLPAVPIVGL
                     LEGGYIPERLAAGVTAHLRGLA"
BASE COUNT          321 a          602 c          589 g          279 t
ORIGIN      
        1 caccgccagg ccgtccaggt cctccggagg aagcggctgc tcgagcactg tgaccccgaa
       61 ctcatccagc accggcagca tccggatggc cccttttacc gtccacccgc agttggcgtc
      121 tacccggatc tccttgtccg tcgcctcccg aatggcacgc aggatctcca gatcgcgatc
      181 cgttccgagc ttcaccttca ggatgggaaa ctgctcggcc tcccgcacct tggccttgat
      241 gcgatccgga gtatccaggc cgatagtgaa ggtggacttc ggcgccatgc atgggtcgag
      301 tccccagagc cggtacaccg gaacgccgag ccgcttgccc acgaggtcat gcagcgccgc
      361 ggagagcgcc gcccgggccg ccgcgtttcc ccggagcatc gtttcccagc gtcgctccgc
      421 atcctccaga ttgaacggat catcgggcag agcggagcca tagaactcga gagccgcggc
      481 cacgctgtcg gccgtctcgc catagaactt gcttggcgcc gcttcgcccc aaccctcgag
      541 tccatccccg tcggtaaggc ggacccaggc agtgcggtag tcgctctgtc caccacgggc
      601 gatgatgaag ggatgcttgg tgcggagctc gagaaactcg acatccatcc gcaaggcgtg
      661 gggcaaagcg tcctcggatt gaaagagtga attggcgtgg agccggctgg attatatggc
      721 gcgaggccga ccggggacag tccggatcag gccaacccgc gcagatgagc ggtgacccct
      781 gccgcgagac gttcgggtat atagccgccc tcgagcaggc ccacgatcgg caccgccggc
      841 aatcggtcgc gcagccgcgt agtcaggtcg gtgtaatgct ccggctccag ggtgaaacct
      901 ccgagcggat cgccggccat cgcatcaaac cccgccgaca cgagcacgag ggccggcgac
      961 caaccggtcg tcgccgcaac gacggcagcc cacagatctc caacgtacaa ggccggcggc
     1021 ttgcccggcc cgcggggcac attgaagatg ttgccgacgc ccctttcctc ggcggctccg
     1081 gtaccggggt accagggatg ctggtgcagt gagacgtagc ggacagtggg atcggtctcc
     1141 accagggcct gggtcccgtt gccatggtgc acgtcccaat cgatgatcag cacccgctcg
     1201 cggcctgcgc gttgagcgtg gcgagcggca accaccacgt tgttcaccag acagaagccc
     1261 atcccccgag ccgcaagggc gtggtggccg ggtggccgca ccgccgcaaa gccatgtgca
     1321 cgatcgtcga gcgcgtggtc tacggcggcc agcacggcgc ccgtcgcgcc gagtacggca
     1381 gcccagctgt cccggctgag gacggtgtcg agaaagagcg caccgccgcc gcgcgcgctc
     1441 atcgcctgca ggctcgccag ataggcccgc gggtgcacgg ccagcagcgg gtcgagccca
     1501 gcggactctg cttcctggac tgcgacgctc tggtccttgc gcaaccactg caggatcgcg
     1561 cgcagcctgg caggggtctc gggatggtcc gggccgggat cgtgcttcag gcagctggaa
     1621 tgggtgaaga cggtgactgg catggggtaa aagtaagagg tgagcggtga gaggtgagag
     1681 gtgagaggtg tgaggagacg ccgaatcgaa ccgggccctc tcacttctca cgtctcacct
     1741 cttacgtaaa gaccgctgca tctcccgcgc atcgtcaccc aaggcacggc g
//
LOCUS       DASYRV010000148         8223 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2731014, whole genome shotgun sequence.
ACCESSION   DASYRV010000148 DASYRV010000000
VERSION     DASYRV010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8223
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2731014"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(97..2166)
                     /locus_tag="VGQ24_03725"
     CDS             complement(97..2166)
                     /locus_tag="VGQ24_03725"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEV8453973.1"
                     /translation="MSRLLQRYTQVLGVGGLVLTLVVLALDRRWIGQPVSTLVLMISI
                     FALRCVPVRLSKYSYLTQSAVPVLVGAVSIGPSPVVAALWVGVICADVFGLRKQSRAG
                     LVNAGREVIGFVAAFGPYAAILSLGTTAALTLDFLPAAAILVSLYFFITKALFYFSLL
                     TRRKLENAEKILILRWEISSYLLTLIAVTIVVVALATLAPVGWLAVGLALGVLGLLTR
                     QILDEAIGAEDLNKVHLMEAAIASNSTLQGSFSQIERLAYRLLDWGDFRVYRVNGTET
                     SLAYRASIGREDRNAPAAGIGPLRQEVMQTGEPIVIKDVRSDDRLGDFPDGVRTLAIH
                     PIRFGDEVLGTLEVEHHKRHAYGAKDLVAMSTLAGQIATAIHIAELRRPLVLTVGQIG
                     EQVATLARVADSLRSSASALADVSLGMRQGAMELEKFASGGLRATGSLANASQQMMTQ
                     GAQAAAASGTAAEVAARNRVVIGDAIARLVELKGFVSAGADRVAALGSMTQRITGFIG
                     TIREIADLTNLIALNAAIEAARAGREGRGFAVVASEVRDLAAQSLHAAREAGGLLGEI
                     TTQVSAVSAQMTRGREVVAGVEELSADAARALDAIVGTTGEAGGHAKAIAATAAQQRD
                     AVNTLTGQIEQVAAGSAKSRADTDTLAKRAGEASAGQADLERAIRELGDLASDLQRIA
                     SHFVVEA"
     gene            complement(2175..2966)
                     /gene="trpA"
                     /locus_tag="VGQ24_03730"
     CDS             complement(2175..2966)
                     /gene="trpA"
                     /locus_tag="VGQ24_03730"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR00262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEV8453974.1"
                     /translation="MSESRLEPAWTALKSSGRSALIPYFTAGFPTIDVSEAALRSAAE
                     VSDIIEVGVPFSDPLADGPTIQRSTFEALRQGMTLARTLELIARAELSLPIVIFSYLN
                     PILRYGLDRFLADAEHLGVAGLILTDLPAGSDAAVEAAVRRSRLDLIRLIAPTTRDDR
                     LALAVKGAQGFVYLVARLGVTGATASLGADLASSVERVRRATPLPVAVGFGISTPEQA
                     RTVARMADGVVVGSALVDILGREGVSAARRFLGSLRVALDERVPV"
     gene            complement(2959..4413)
                     /locus_tag="VGQ24_03735"
     CDS             complement(2959..4413)
                     /locus_tag="VGQ24_03735"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEV8453975.1"
                     /translation="MTQPADASNERSTPDGQLRQGGRTLLLAFYTALRSLKLYPLENT
                     TVQNSLEDLDVVARRLLDLEGELEIRMSGDFIFVNATRLRVELDNYASFSHILAMFRA
                     FDIGALRIRPGIEKREWQVFLSVLLRLAERGPAEEPMEELQDRLEEAKVAHLELDRPL
                     PEGGSTEQSRHAAKQVYAQGVAVTKDVIGSVRMGRTARLKRVKRAVQLVVDQVLNNET
                     SMLGLTALRDYDEYTFTHSMNVCIISVALGKKLGFSKVQLCDLGMTALLHDVGKARIP
                     AEILNKAGKLDEQEWKVIQAHPWFGALTLFSMRAYEEIPYRSILVAHEHHMKIDLTGY
                     PKVVRPRTLGIFSRIVAVADAFDAATTRRVYQTIPVEPDEVLREMWENPKRGQDRVLV
                     KALINLVGVYPIGTCIILDTFEVAVVSGASADRQQLNRPIVRIALDAEGGPVPLPGIE
                     VNLSEKDESGVYRRSIVKVTNPDRFGITVGDYFV"
     gene            complement(4410..6092)
                     /locus_tag="VGQ24_03740"
     CDS             complement(4410..6092)
                     /locus_tag="VGQ24_03740"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEV8453976.1"
                     /translation="MTTGQATNKLLAAPQVSELIQILAKALRAFQMYMPNNPIYQRAI
                     NNMSAAFQPIWAATDELLIHVVETELVWEDQVVYRQASKNESLAWSLFKDGMRELTIH
                     KGAEAEELPRLLAIINQARFLATDAGDDLLTLLWAHEFQLIQYQFVDLFGEGGGAIPE
                     PSGAPAGGETTAAERKAQAAQEAQTRPEGVVAVDEFDSTLYFLDESEMGYVATELEAE
                     YRRDVRTSALDILFDLIEVNSDDKVRDEVLNILEQLFPNFLNSRDFRAAATVLRESKQ
                     LKEKSLGFTPAHLQRLGTFSSSLSEPATVGQLLQSLDEASGLGVDTHAAEVIKELRAS
                     ALEPLIGWLPSLSSAPLRKTLEEVIDRLAGNNTAEVHRLLKTPDSSALEGIIALCGRL
                     ALHQAVPGLAETMGHAKPSVRLATVQTLAQLGTPGALSLVDRAIEDEDKAVRIAAVRA
                     AGTRGYKGALKRVESVVLGKSKDMDLTEKMAFFEAYGSIAGANGLKALSAILLQRGLL
                     RMKEPADTRACAAMALGRIKTPEARDILQRATEDKELVVRNAVNRALREVAA"
     gene            complement(6089..7261)
                     /gene="trpB"
                     /locus_tag="VGQ24_03745"
     CDS             complement(6089..7261)
                     /gene="trpB"
                     /locus_tag="VGQ24_03745"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEV8453977.1"
                     /translation="MEGRFGPYGGRYVPETLVAALDELTALYDAAKADPTFWAELDAL
                     LAEFVGRPSPISEAPRFSDLVGARVLLKREDLNHTGAHKINNTLGQALLARRMGKRRI
                     IAETGAGQHGVATATVCARFDLECIVYMGAEDMRRQRLNVYRMELLGATVIPVESGTR
                     TLKDATNEALRDWVTNVPTTHYIIGSVVGPDPFPRMVRDFQSVIGREARAQMLARYGH
                     LPHTVVACVGGGSNAMGIFSAFLDDAEVRLVGVEAAGKGLATGQHSATLTAGTPGVLH
                     GSLSYLLQDADGQVAPAHSVSAGLDYPGVGPEHSYLRDSGRVQYDTANDAEALDAFQT
                     LCRLEGIIPALETAHALAWVRRSKGAWLQEASVLVCLSGRGDKDVAHVADLLGATA"
     gene            complement(7269..7913)
                     /locus_tag="VGQ24_03750"
     CDS             complement(7269..7913)
                     /locus_tag="VGQ24_03750"
                     /inference="COORDINATES: protein motif:HMM:NF012900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEV8453978.1"
                     /translation="MAAKIKICGIMRPDDAAFAVTAGASYLGVVFAEGPRRVTSDIAG
                     EVVAAAGGMVVMGVFDDQPVDEILQICDKARLSGAQLHGSYSPPSAARLRAAGLKVWR
                     VVRIAAPSDLDLLGEAIHESDAVLVEPKVPRRRGGAGLPLDLAVAREARARLTGHPMA
                     LAGGLTAETVSEALALVRPEIVDVSSGVERLPGIKDLDKIARFVEAVFAHSPIT"
     gene            complement(7903..>8223)
                     /locus_tag="VGQ24_03755"
     CDS             complement(7903..>8223)
                     /locus_tag="VGQ24_03755"
                     /inference="COORDINATES: protein motif:HMM:NF012444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453979.1"
                     /translation="AGLDALVEVHSLPELDTALAAGAAIIGVNSRDLDTFRIDTVAAW
                     EVIRQVPPERIAVAESGISRQSDVARAAEAGADAVLVGTALSQAASPEGLLRELTRVP
                     RHGR"
BASE COUNT         1419 a         2788 c         2603 g         1413 t
ORIGIN      
        1 agcctggttc cgggtagcgc ggccagcgcc tcacgccctg cccggagatg ggcggctcga
       61 tcgcccaggt tgctgcccag cgctacgaag acccgatcaa gcctcgacga caaagtgact
      121 cgcgatccgc tgaagatccg acgcgagatc accgagctca cggatggcgc gctcgaggtc
      181 cgcctgtccc gcagaggcct cacccgcccg cttggccaac gtgtcggtat ctgcccggct
      241 cttggccgag ccggcggcga cctgctcaat ctgtccggtg agggtgttca ccgcgtcacg
      301 ctgctgggcg gccgtcgcgg caatcgcctt cgcgtggccg cccgcctcgc cggtcgtgcc
      361 cacgatggca tcgagcgccc gggccgcgtc ggcgctcagc tcttcgaccc ccgcgaccac
      421 ctcgcggcct cgcgtcattt gagcggacac cgccgagacc tgggtggtga tctcgccgag
      481 caacccgccg gcctcacggg ccgcgtggag gctctgcgcc gccagatcac gtacttcgga
      541 ggcgactact gcgaagccgc ggccctcccg gccggctcgg gcagcctcga ttgccgcgtt
      601 caacgcgatc aggttggtca gatcggcgat ctcgcgaatg gttccgatga acccggtgat
      661 ccgctgggtc atcgagccga gggcggctac ccggtccgcg cccgcggaga caaacccctt
      721 gagctccacc agccgggcaa ttgcgtctcc gatcacgacg cgattgcgag cggccacctc
      781 ggccgcggtg ccgctggccg ctgccgcttg cgcaccctgg gtcatcatct gctgcgacgc
      841 gttcgcgagc gagccggtgg ctcggaggcc acccgaggca aacttctcca gctccattgc
      901 gccctgccgc atgccgagcg acacgtcggc caacgcgctg gcggagcttc ggagtgagtc
      961 tgctacccgg gcgagcgtcg ccacctgctc accgatctgc cccaccgtca gcaccagcgg
     1021 ccggcgcagc tcggcgatgt ggatcgccgt cgcgatctgg cctgccaacg tgctcatcgc
     1081 caccaggtcc ttggcgccgt acgcatggcg cttgtgatgc tcgacctcca gggtgcccag
     1141 gacctcgtcg ccgaagcgga tcggatggat cgccagcgtc cgcacaccgt ccgggaagtc
     1201 cccgagacga tcgtcggacc tcacgtcctt gatcacgatc ggctcacccg tctgcatcac
     1261 ctcttgccgg agcggaccga tgccggccgc tggagcgttc cggtcctccc gtccaataga
     1321 agcacgatag gcgagcgacg tctcggtccc gttcacccgg tacacccgga agtcgcccca
     1381 atcgagcagc cggtacgcga ggcgttcgat ctgggagaac gagccctgga gggtggagtt
     1441 gctcgcgatc gccgcctcca tgaggtggac cttgttcagg tcttccgcgc cgatggcctc
     1501 atcgagaatc tgtcttgtca gcagacccag caccccgagg gccaggccga cggccagcca
     1561 tccgacgggg gcgagcgtgg cgagggcgac aacgacgatc gttaccgcga tgagcgtgag
     1621 cagataagag ctgatctccc atctcaggat cagaatcttc tcggcgttct ccagtttcct
     1681 ccgagtgagc agactgaagt agaaaagtgc cttggtaatg aagaagtaga gcgagaccag
     1741 gattgcagcc gccgggagaa aatcgagagt cagcgccgcg gtggtgccga gcgagagtat
     1801 cgcggcatag ggaccgaacg ccgctacgaa cccgatcact tcccgcccgg cgttgacgag
     1861 accggcccgc gactgcttcc gaagtccgaa cacgtcggcg cagatcacac cgacccagag
     1921 cgccgccacc accggggaag gtccgatcga gaccgcccct accaggacgg gaaccgccga
     1981 ctgagtcagg taggagtact tgctcaggcg cacggggaca cagcgtagcg caaaaatgct
     2041 gatcatcaac accagagtgg atactggctg cccgatccag cgccgatcga gagccagcac
     2101 gaccagggtg aggaccagcc cgccgacccc gagcacctgg gtataccgct ggagcaggcg
     2161 ggacatgttg atcctcacac cggcaccctt tcatccagcg cgacgcgaag cgagcccagg
     2221 aaccgtctgg cagcgctcac gccctcgcgg cccagaatgt ccacgagcgc gctcccgacc
     2281 acgacgccgt cggccatccg cgcaaccgtc cgcgcctgct ccggcgtcga tatcccgaaa
     2341 ccaaccgcca ccgggagcgg agtggcccgc cgcacccgct cgaccgagct cgcgagatct
     2401 gcgccgagcg acgcggtggc cccggtcact ccgagccggg ctaccagata gacgaaaccc
     2461 tgggcaccct tcaccgcgag tgcgagacga tcgtctctgg tggttggcgc gatcagccgg
     2521 atgagatcga ggcggctccg gcgcaccgcg gcttccactg ccgcgtcgct gccggctgga
     2581 agatcggtga gtatcaaacc ggcgactccg aggtgctcag catcggccag aaagcgatcg
     2641 aggccatacc ggaggatggg gttgaggtag ctgaagatga cgatgggaag actcagctcg
     2701 gctcgggcga tcagctcgag cgttcgcgcc agagtcattc cctgcctgag cgcctcgaag
     2761 gtggagcgct ggatcgttgg cccatcggcc agcggatcgc tgaatggcac gccgacttcg
     2821 atgatgtcgg agacctcggc ggccgagcga agtgccgctt cgctcacgtc gatcgtggga
     2881 aagccggcgg taaagtaagg gatcagagcc gagcggccgc tggacttgag ggcggtccag
     2941 gccggctcga gccgggactc agacaaaata gtcgccaacc gtgatcccga agcggtcagg
     3001 gttggtgacc ttcacaatgg accgccggta cactccactc tcgtccttct cgctcaggtt
     3061 gacttcgata ccgggcaacg gcactgggcc tccctcagca tccagggcga tgcgcacgat
     3121 cgggcggttg agttgctggc ggtccgcgct ggcccccgac acgaccgcca cctcgaaggt
     3181 gtccagaata atgcaggttc cgatcggata cactccgacg aggttgatga gcgccttgac
     3241 cagcaccctg tcctgacccc gcttcgggtt ctcccacatc tcccgaagca cctcatccgg
     3301 ttccaccggt atggtttggt agacccgccg cgtggtcgct gcatcgaagg catcggcgac
     3361 cgcgacgatg cgggagaaga tacccagcgt ccggggccgc accaccttgg gatagccggt
     3421 gagatcgatc ttcatgtgat gctcgtgcgc caccaggatg gaccgatagg gaatctcctc
     3481 gtaggctcgc atactgaaga gggtgagtgc gccaaaccag ggatgggcct ggatgacttt
     3541 ccattcctgc tcatcgagct tgccggcttt gttcaggatc tcggctggta tgcgcgcctt
     3601 gcccacatcg tggagcagcg ccgtcatccc cagatcgcac agctgcacct tggagaaacc
     3661 cagctttttg ccgagcgcca cggagataat gcagacgttc atcgagtggg tgaaggtgta
     3721 ctcgtcgtaa tcccggagcg ccgtcaggcc aagcatggac gtttcgttgt tcaggacctg
     3781 gtccacgacc agctggactg cccgcttcac ccgcttcagg cgcgcggtgc gacccattcg
     3841 gacactgcca atgacatcct tggtgaccgc gacgccttgg gcgtagacct gtttggcggc
     3901 gtgacgcgac tgttccgtgc tgccgccttc gggcagtggg cgatcgagct ccagatgggc
     3961 caccttcgcc tcttccagac gatcctggag ctcttccatc ggctcctccg cagggccccg
     4021 ctcggccagg cggaggagga cgctgaggaa cacctgccat tcccgctttt cgatcccggg
     4081 cctgattcgg agggccccga tgtcgaacgc ccggaacatc gcgaggatgt ggctgaagga
     4141 cgcataattg tccagctcga cccggagacg ggttgcgttg acgaagatga agtcgccgga
     4201 catccggatc tccagctcgc cttcgaggtc cagcagcctg cgggccacga cgtccaggtc
     4261 ctcgagtgaa ttctgaaccg tcgtgttttc cagcggatac aacttgaggc ttcggagcgc
     4321 cgtgtaaaaa gcgagcagga gggtgcgtcc gccctgcctg agttgcccgt cgggcgtgga
     4381 gcgctcgttg ctcgcatcgg cgggttgggt cacgctgcga cctcccgcag ggcgcgattc
     4441 acggcattgc gcaccaccag ctccttgtcc tcggttgccc gctggaggat atcgcgggct
     4501 tcgggtgtct tgatccggcc cagcgccatt gcggcgcacg cccgagtgtc cgccggctcc
     4561 ttcatcctga gcagtccccg ctggagcagg atggcactca gcgccttcaa gccgttggcg
     4621 cccgcaatgg acccgtacgc ctcgaagaac gccatcttct cggtgagatc catgtccttg
     4681 gactttccga gcacgacgct ctccacccgc ttgagggcac ctttatagcc tcgggttccc
     4741 gccgcgcgca ccgcagcgat tcgcaccgct ttgtcctcat cctcgatcgc tcggtccacc
     4801 agactcaagg cgccgggggt gccgagctga gccagcgttt gcactgtcgc aagccggaca
     4861 gagggtttcg catgccccat ggtctcggcc agcccaggca cagcctggtg gagcgccagc
     4921 cggccgcaca acgcgatgat cccttccaaa gcggaagagt cgggcgtctt caggagccgg
     4981 tggacctcgg ccgtgttgtt gccggcgaga cggtcgatga cctcctccag ggtcttgcgg
     5041 agcggagccg aggagagact cggcagccag ccgatcagcg gctccagagc cgacgctcgc
     5101 aactccttga tgacttcggc cgcatgggta tccacgccga gcccgctggc ttcatcgagc
     5161 gattgcagca gctgccccac cgtggcaggc tcgctcagac tggagctgaa agtaccgagc
     5221 cgctggaggt gagccggcgt gaaccccagc gatttctcct tcagctgctt ggattcgcgc
     5281 agcaccgtgg ctgccgccct gaagtcccgg ctgttgagga agttggggaa gagctgctcg
     5341 agaatgttca gtacctcgtc gcgcaccttg tcatccgagt tgacctcgat caggtcgaac
     5401 aggatgtcga gcgcgctggt gcggacgtcc cggcggtact cggcctcgag ctcggtggcc
     5461 acgtagccca tctcgctctc atcgaggaag tagagcgtcg aatcgaactc atcgacggcc
     5521 accactcctt cgggccgcgt ctgagcctcc tgggccgcct gcgccttccg ctccgccgcg
     5581 gtcgtctcgc cgccggcggg ggctcccgac ggctcgggaa ttgctccccc accctccccg
     5641 aataggtcca cgaactggta ctgaatgagc tgaaactcgt gggcccagag gagcgtgagc
     5701 agatcgtctc cggcatcggt ggcgaggaag cgagcctgat taatgatggc aagaagtctg
     5761 ggcagctcct cagcttcggc gcctttgtga atggtgagct cgcgcatgcc atccttgaaa
     5821 aggctccagg ccaagctctc gttcttgctc gcctgccgat acaccacctg atcttcccac
     5881 accagctcgg tctcgaccac gtggatgagc agctcatccg ttgcggccca gatcggctgg
     5941 aaggccgcgc tcatgttgtt gattgcccgc tggtagatgg gattgttcgg catgtacatc
     6001 tggaaggcgc ggagcgcttt cgccaggatc tggatcagct ccgatacctg gggggcggcc
     6061 agcagcttgt tggtagcctg accggtggtc acgcggtggc tccgagaaga tcggccacgt
     6121 gggccacgtc cttatcgcct cgtccactca gacagaccag cacggaggct tcctgcagcc
     6181 aggctccctt cgaacgcctg acccaggcca gcgcgtgggc ggtctcgagg gccggaatga
     6241 ttccttcgag gcggcaaagc gtctgaaacg cgtccagtgc ctcggcatca ttcgcagtgt
     6301 cgtactgcac ccggccgctg tcccggaggt agctgtgctc cggtccgacc ccgggataat
     6361 ccagtccggc agacaccgag tgcgccgggg caacctggcc gtcggcgtcc tgtaggagat
     6421 agctcaggct gccgtgcagg acaccaggtg tacctgcggt caacgtggca ctgtgctggc
     6481 cggtagcgag ccccttcccg gcggcctcga cccccacgag ccgcacctca gcgtcatcga
     6541 gaaaggcact gaagatgccc atcgcattcg agcccccgcc gacgcacgcg accacggtgt
     6601 gcggcaggtg gccataccgc gccagcatct gcgcgcgggc ctcgcgcccg atcaccgact
     6661 ggaagtcgcg caccatgcgc ggaaacggat cgggccccac caccgagccg atgatgtagt
     6721 gcgtggtagg cacgttcgtc acccaatcgc gcagcgcctc attggtcgcg tccttcagcg
     6781 tgcgggttcc cgactcgact ggaatcacgg tggcgccgag cagctccatg cgatagacat
     6841 tgagccgctg ccgccgcata tcttcggccc ccatgtacac gatgcattcg agatcgaagc
     6901 gggcgcagac agtggcggtg gccactccgt gctgccccgc tccggtctcg gcgataatcc
     6961 tccgctttcc catgcggcga gccagcaagg cctgtcccag tgtgttgttg attttgtgag
     7021 ccccggtgtg attcaggtcc tcccgcttga gcagcacgcg ggcgccgacc aggtcgctga
     7081 atcggggagc ttctgagatg ggcgaaggcc tgccgacgaa ctccgcgagt agcgcgtcga
     7141 gctccgccca gaacgtggga tcggccttgg cggcatcgta caacgcggtc agctcgtcga
     7201 gcgccgcgac gagggtttcc gggacgtagc ggccgccata gggaccgaaa cgaccttcca
     7261 ccgccctctc aggtgattgg gctatgagca aacaccgcct ccacaaatcg agcgatttta
     7321 tcgaggtcct tgattcccgg caggcgttct acgccggaac ttacatccac gatctcggga
     7381 cgaacgaggg ccagcgcttc cgagaccgtc tcggcggtca gtcctcccgc gagcgccatg
     7441 ggatgcccgg tgagccgggc tcgggcctcc cgagctaccg ccaggtcgag cggcaaaccg
     7501 gccccgcctc tgcgccgcgg gaccttcggc tccaccagca ccgcgtcgga ttcgtggatc
     7561 gcttctccca gcaggtccaa gtccgaaggc gccgcgattc gcacgacgcg ccagaccttg
     7621 agcccggcgg cgcggagccg tgcggctgag ggaggagaat agctgccgtg gagctgcgcc
     7681 ccgctaagcc tagccttgtc acagatctgg aggatctcgt ccaccggttg atcgtcaaag
     7741 acccccatca ccaccatacc cccggcggcc gccacaacct cacctgcgat gtctgaggtg
     7801 acccttctcg gtccttcagc aaaaacaacg ccgagatagg aggcgccggc cgttacggcg
     7861 aaggccgcgt cgtcgggccg catgatgccg cagattttga tcttagcggc catgtctcgg
     7921 cactctggtc agctctcgaa ggagaccctc gggagatgcg gcctgcgaga gcgccgtgcc
     7981 gacgagaacg gcgtccgcgc cggcctcggc cgcccgcgcc acgtcgcttt gccggctaat
     8041 gccactttct gccaccgcga tacgctccgg cggaacctgt cggatgacct cccacgcagc
     8101 caccgtatcg atccggaagg tgtccaggtc tcggctgttg accccgatga tcgccgcccc
     8161 cgcggccagt gctgtgtcga gctccgggag gctatggacc tccaccaggg cgtcgaggcc
     8221 ggc
//
LOCUS       DASYRV010000149         3271 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3999059, whole genome shotgun sequence.
ACCESSION   DASYRV010000149 DASYRV010000000
VERSION     DASYRV010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3271
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3999059"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..843
                     /locus_tag="VGQ24_03760"
     CDS             <1..843
                     /locus_tag="VGQ24_03760"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HEV8453980.1"
                     /translation="AGREPSGRVGGGAGPTAPGAPGERAVAAPLPRGPAAPLQPAATV
                     DPWPGDRVEPWSRIRKLTADHMVMSRRVSPHVNTVFEIDYTRVAQIRARQKKEYADRG
                     VNLTYLAFITKVVADNLRKHPVLNSAVSGESTLFRRDINIGIAVALDWGLIVPVIKHT
                     DELSLLGVARAINDLGERARTKKLSPDEVQKGTFTITNPGVFGSVIGTPIINQPQAAI
                     LCVGAIEKQPAVITLDGADMIAVRTKGMLSLAFDHRIVDGADADRFMADVKGGLQDFP
                     ENGA"
     gene            845..1111
                     /locus_tag="VGQ24_03765"
     CDS             845..1111
                     /locus_tag="VGQ24_03765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453981.1"
                     /translation="MPRRIIEVDGEQWAVAVSGRVTQYVKDEFGLVFTRGVGPKREQR
                     VVRYSPLGSKGREVSLGQLSDSELRDLLAHSQPSWTAPEMGYRR"
     gene            1144..1986
                     /locus_tag="VGQ24_03770"
     CDS             1144..1986
                     /locus_tag="VGQ24_03770"
                     /inference="COORDINATES: protein motif:HMM:NF014826.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HEV8453982.1"
                     /translation="MIDLHVHSTASDGSLSPGGVVKRAAGAGLRAIALTDHDTLAGIP
                     EALAAGEQYGVRVVGGCEFSAAAPWGEMHVLGYFLPADSPPLDAFLERCRADRLRRAQ
                     EMVQHLQRLGVDLSFDSVLQESAGGAVGRPHVARAIVRHGGAIDLGDAFDRFLGRGRP
                     AFVEKTLPQFRIITELVHATGGLVSVAHLKERGTRAFIERLKGEGLDAVETRHPSHDP
                     DLRARLTDITLQLGLLRTGGSDWHGDPEPGVTHGTIGSQWVPMEWLERLDGLRAGSLT
                     SRLP"
     gene            1983..2123
                     /locus_tag="VGQ24_03775"
     CDS             1983..2123
                     /locus_tag="VGQ24_03775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HEV8453983.1"
                     /translation="MTLLQPETLAPDFTASASDGRTYRLQELLKQSRVLLVFYPGNNT
                     PG"
     gene            2139..2426
                     /locus_tag="VGQ24_03780"
                     /pseudo
     CDS             2139..2426
                     /locus_tag="VGQ24_03780"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
     gene            2423..3160
                     /locus_tag="VGQ24_03785"
     CDS             2423..3160
                     /locus_tag="VGQ24_03785"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEV8453984.1"
                     /translation="MSTGQFDFRGKVALVTGVGRAGQIGNAVALAFGKAGAKIVACDL
                     NAVGVAERVREFAAQGVDARPCAGDLTEPDIAALAVETALKHFGRLDIVVNVAGGLTT
                     YGPISDVTVQALDREIAINLKTTVLVSQAGIEALTRTQGCIVNFSSIAYFEPQTPMAV
                     YSAAKAAVAGFTQSLALELQDRRIRVNAVAPAMVRTMDNLAAVGDADAPYVEMQAITD
                     GVMALASGTSSKTGEILPISPTGTGTR"
BASE COUNT          530 a         1060 c         1137 g          544 t
ORIGIN      
        1 gcggggcggg agccctccgg gcgggtaggc ggcggggcag gaccaaccgc gcctggagcc
       61 ccgggagagc gagcggttgc cgccccgctg ccccgcggcc ccgctgcccc gctccagccg
      121 gcagcaacgg tcgatccgtg gcccggcgac cgggtcgagc catggtctcg catccggaag
      181 ctcaccgccg atcacatggt gatgtcgcgg cgcgtctcgc ctcacgtcaa cacggtgttc
      241 gagatcgact acacccgcgt ggcgcagata cgagcgcggc agaagaagga atacgctgac
      301 cgcggcgtga acctgacgta tctggccttc atcaccaagg tggtagccga caatctccga
      361 aagcacccgg tgctcaactc cgcggtctca ggagaaagca ccctgttccg tcgggatatc
      421 aacatcggga tcgccgtggc gctcgactgg ggactgatcg tcccggtcat caagcacacc
      481 gatgagctgt cgctgctggg ggtagcccgt gccatcaacg atctggggga gcgggcccgg
      541 accaagaagc tgagcccgga cgaagtgcag aagggcacct ttacgatcac caatcccggc
      601 gtcttcggat ccgtgatcgg cacgcctatc atcaaccagc cacaggcggc catcctctgc
      661 gtcggcgcaa tcgagaagca gccggcggtg atcaccctgg atggcgccga catgatcgcg
      721 gtccgcacca agggcatgct ctcgctcgcc ttcgatcacc ggatcgtgga tggggccgac
      781 gccgaccggt tcatggccga cgtgaaaggc gggcttcagg attttcccga gaacggggcc
      841 tgagatgccg cgacgcatca tcgaggtgga tggggagcag tgggcagtgg cggtcagcgg
      901 ccgggtgacg cagtacgtga aggacgagtt cggcctggtc ttcacccggg gagtcggccc
      961 caaacgcgag cagcgggtgg ttcgctactc gccgctcgga tccaaagggc gcgaggtgtc
     1021 gctcggacag ctgagcgact cggagctgcg cgacctgctg gcccattccc aaccgtcgtg
     1081 gacggcgccc gagatgggat accggcgctg accgccgcgg gcggggcgtc aggcccgggg
     1141 gacatgatcg atctgcacgt gcactcgacc gcctcggatg gaagcctgtc gcctggcgga
     1201 gtggtgaagc gtgcagccgg agcggggctc cgggccatcg cgctgacgga tcatgacact
     1261 ttggccggca tcccagaagc gctcgcggcc ggtgaacaat acggagtccg ggtggtgggc
     1321 ggctgtgagt tttcggctgc cgctccgtgg ggcgagatgc acgtgttggg gtattttctg
     1381 ccggccgatt cgcctccgct cgatgcattc ctcgagcgct gccgcgcgga tcggctgcgg
     1441 cgtgcccagg agatggtcca gcacctccag cggctggggg tggacctctc gttcgacagc
     1501 gtgcttcagg agtctgccgg gggggcggtt ggtcggcccc acgtcgcgcg ggcaatcgtc
     1561 cgccatggcg gggcgataga tctgggcgac gcgtttgatc gctttctggg tcgcgggcgt
     1621 cccgcgttcg tcgagaagac gctcccccag ttccgcatta ttacggagct ggtccacgcg
     1681 accggtggtc tggtgtctgt ggcgcacttg aaggagcgcg ggacccgtgc cttcattgag
     1741 cggctcaagg gcgaggggct cgatgcggtg gagacccgcc acccgagcca cgaccccgat
     1801 ctccgcgcac gcctcaccga catcacgctc cagctcggcc tgcttcggac cggcgggagc
     1861 gattggcatg gcgatccgga gccgggtgtg acccacggta ccatcgggtc ccagtgggtc
     1921 ccgatggagt ggctcgaacg gctcgatggt cttcgggccg gttctctgac ttcgcgactt
     1981 ccatgactct cctccagcct gagacgctcg cgccggactt caccgcctcc gcatcggacg
     2041 ggcgaaccta tcgattgcag gagctgctca agcagtcgcg ggtcctgctg gtgttctacc
     2101 ccggaaacaa cacccctggc tgaaaccgcc aactctccgc cgtgcgcgat gagatcgatg
     2161 cctacactgc ccacgacgtt cgccccttcg gcgtgaaccc ggcatccgtc gaaggtcatg
     2221 cggcgtatgc ggcgcgactg ggcctgccct ttccgctgct ctccgatccc ggactcgaaa
     2281 tcagcggtgc ctatggcacc ctcaagccaa acggatccgg gattgcacgg tcggtctgct
     2341 tgatcgaccg ggacggccgg gttctgtaca gtcaggccgg agcgccgggc gccgacgtga
     2401 tcctcgaggg agtgaggtcc ccatgagtac cggccagttc gacttccgtg gcaaggtcgc
     2461 cctggtgacc ggggtgggac gggccggcca gatcgggaat gccgtggccc tcgcattcgg
     2521 caaggcgggc gccaagatcg tggcctgcga tctcaacgcc gtgggcgtgg ccgagcgggt
     2581 gcgcgagttt gcggcgcagg gagtggatgc gcggccctgc gcgggcgacc tcacggagcc
     2641 ggacatcgcg gcgctggccg tggagaccgc gctcaaacac ttcgggcggc ttgatatcgt
     2701 ggtgaatgtt gcgggcgggc tgacgaccta cggacccatc agcgacgtga ctgttcaagc
     2761 gctcgatcgg gagatcgcca tcaatctgaa gaccacggtg ctcgtctccc aggcgggtat
     2821 cgaggcactg acccggactc agggctgcat cgtcaacttt tcctcgatcg cgtatttcga
     2881 gcctcagact cccatggcgg tgtacagcgc agccaaggcg gcggtggccg gatttactca
     2941 gagccttgcg ctcgagttgc aggaccgccg catccgggtc aacgccgtgg cccccgcgat
     3001 ggtgcgcacg atggataatc tcgcggccgt gggcgacgca gacgccccgt acgtcgagat
     3061 gcaggccatc accgacgggg tgatggcgct ggcaagcggt acctcctcca agaccggcga
     3121 gatcctaccc atttcaccca ccggcaccgg aactcgctga tggagctccg gggcaaggtg
     3181 gccctggtga ccggtgcggg acggcggctc gggcgtgcca tggcgcgcgc cctggcggag
     3241 cgcagcatga gggtcgccat ccactaccac g
//
LOCUS       DASYRV010000150         2437 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3766709, whole genome shotgun sequence.
ACCESSION   DASYRV010000150 DASYRV010000000
VERSION     DASYRV010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2437
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3766709"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..685)
                     /locus_tag="VGQ24_03790"
     CDS             complement(<1..685)
                     /locus_tag="VGQ24_03790"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEV8453985.1"
                     /translation="MDLGIRGRVAVVAAASKGLGRAVAEELAAEGVDLVLCARGDAAL
                     RATAEAIRQRSLAKVHTVQADVGKAGEPERVVREAIKKFGGVDILLTNSGGPPAGPFE
                     AHSAEAWDSAYRLVLASVVEFCRAVLPGMKERRWGRILNMTSIAAKQPVDNLMLSNSI
                     RAGVIGFARTLANEVAPFGITVNNLVPGFTKTERMVELAELNARKEGISVEEAQRRWG
                     RILNVTSIAA"
     gene            complement(729..1097)
                     /locus_tag="VGQ24_03795"
     CDS             complement(729..1097)
                     /locus_tag="VGQ24_03795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEV8453986.1"
                     /translation="MTRSVTHHRWEDLPRERVTDLLDRRLICGERMMLAHVYLKKGCI
                     VPKHSHENEQLTYVLEGCLRFWLGEDQQEVVDVHAGEVLVLPSQVPHKAEALEDTLDV
                     DVFSPPRQDWLDKTDDYLRK"
     gene            complement(1094..>2437)
                     /locus_tag="VGQ24_03800"
     CDS             complement(1094..>2437)
                     /locus_tag="VGQ24_03800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453987.1"
                     /translation="PVWGTIRRIEPSHFDPGTAYVAVDYHMMDNREPFIYQSTDFGKT
                     WKKLSDGLPRGHPLDYVLSVAENPNRKGMLFAGTGHGFFYSLDDGASWTQFKEGLPAA
                     PVTWIEVPKQPHDVVVSTYGRGLFQLRDITMLEQADQVVAGADLTLYAPRPAVREARG
                     GSVDVSYVLKAAPTDSVKLELLDAGGAVVRTIRVAGRAGLNRTTWDLRVDGPRQVELR
                     TTPPDNPRIWDEPRFKGKTIRPIVHWGIQGPQRSGPLVLPGNYTVRVTAGAFSATQPL
                     SVLRDPAIVTSPADLAAAAAVQLKIREHINTTVDMINRIEVMRKQIEDQLKTTAGQDG
                     AGAALRALDQEMLGIELRLVSRTELHSDDKWYVEPYGVYLNLIWLAGEVGTGAGDVAG
                     GAEFRPTDASLETLARLEKQLAEAKVAFDQLLQKTLPAFNRNMSGKFTIAEKQTP"
BASE COUNT          369 a          860 c          764 g          444 t
ORIGIN      
        1 tggccgcgat cgaggtcaca ttcaggatcc ggccccagcg ccgctgcgcc tcctccacgg
       61 agatcccctc ttttctcgcg ttcagctcgg cgagctcaac catccgctcg gtcttggtaa
      121 accccggcac caggttgttc accgtgatcc cgaagggggc cacctcgttg gccagggttc
      181 gggcaaaccc gatcaccccg gcgcggatgc tgttggagag catcagattg tccaccggct
      241 gcttggccgc gatcgaggtc atattgagga tccggcccca gcgtcgctcc ttcatccctg
      301 ggagcacggc ccggcagaac tccaccacgc tcgccagcac cagccggtag gcgctgtccc
      361 acgcttcagc gctgtgtgcc tcgaacggcc ccgctggagg gccgccactg ttggtgagca
      421 ggatgtcgac cccaccgaat ttcttgattg cctcgcggac cacccgctcc ggctcgccag
      481 ctttaccaac gtcggcctga acagtgtgca ccttggccag cgagcgttgc cggatcgcct
      541 cggcggtcgc ccgtaacgcg gcgtcccctc gcgcgcagag caccagatcc acgccctccg
      601 cggcgagctc ctccgccacc gcccgtccga gccccttgct cgccgcagcc acgaccgcca
      661 cgcgccccct gattcccaga tccatctggc tccctgactc ctgacccctg attcctgatt
      721 cctgacctct acttcctcaa gtaatcgtcc gtcttatcca gccagtcctg gcgcggcgga
      781 gagaacacgt ccacgtccag ggtgtcctcc agcgcttccg ccttgtgcgg cacctggctc
      841 ggcaggacca gtacctcgcc ggcgtgcacg tcgaccactt cttgctggtc ttcgccgagc
      901 cagaaccgca ggcacccctc gagcacgtag gtgagctgct cgttctcgtg ggagtgcttc
      961 ggcacgatac agcccttctt caggtagacg tgggccagca tcatccgctc gccacagatg
     1021 agccggcggt cgagcaggtc ggtaacccgc tcgcgcggca ggtcctccca gcgatgatgc
     1081 gtcacggagc gggtcatggg gtctgtttct ctgcaatggt gaacttgccc gacatgttcc
     1141 ggttgaacgc cgggagggtc ttctgcagga gctggtcgaa ggcgaccttc gcctccgcga
     1201 gctgcttctc gagcctagcg agagtctcca gcgaggcgtc ggtggggcgg aactccgccc
     1261 cgcccgccac gtcgcctgcg ccggttccca cctcgccggc gagccagatc aggttaaggt
     1321 agaccccgta cggctcgacg taccatttgt cgtcgctgtg cagctcggtc cgcgacacca
     1381 gccgaagctc gatgccgagc atctcctgat ccagggcccg cagggccgcg cccgcgccgt
     1441 cctggcccgc ggtcgtcttg agctgatcct cgatctgctt ccgcatcacc tcgatgcggt
     1501 tgatcatgtc cacagtggta ttgatgtgct cgcggatttt gagctggacg gccgcagcgg
     1561 ctgcaagatc agcgggactg gtgacaatgg ccggatcccg caggacgctg agcggctggg
     1621 tggcgctgaa cgctccggcg gtcacgcgaa ccgtgtagtt gcccggcaac accagcgggc
     1681 ccgagcgctg gggcccctgg attccccagt gcacgatcgg ccggatcgtc ttgcccttga
     1741 agcgcggctc gtcccagatc cgcgggttat ccggcggcgt ggtccggagc tccacctggc
     1801 gggggccgtc gacgcggagg tcccaggtgg tgcggttgag gccggctctc cccgcgactc
     1861 gaattgtgcg gaccaccgcg ccgccggcgt cgagcaactc gagcttgacc gagtcggtgg
     1921 gagcggcctt caggacgtag ctcacgtcca cgctgccgcc tctcgcctcg cggacggccg
     1981 ggcgcggcgc gtagagcgtg agatcggcgc ccgcgacgac ctgatccgcc tgctccagca
     2041 tggtgatgtc gcggagctgg aagaggcccc ggccataggt cgagaccacc acatcgtggg
     2101 gctgcttggg cacctcgatc caggtgaccg gtgccgccgg gaggccttcc ttgaactgcg
     2161 tccagctggc accgtcatcg agcgagtaga agaagccgtg cccggtgccg gcgaacagca
     2221 tccccttccg gttcggattc tcggcgaccg acagcacgta gtcgagcgga tgaccccggg
     2281 gcaatccgtc gctcagcttc ttccaggtct taccgaagtc ggtgctctgg tagatgaagg
     2341 gctcgcggtt gtccatcata tggtagtcca ccgccacata ggccgtgccc ggatcgaagt
     2401 gggacggctc aattctccgg atcgtgcccc agaccgg
//
LOCUS       DASYRV010000151         3296 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2731334, whole genome shotgun sequence.
ACCESSION   DASYRV010000151 DASYRV010000000
VERSION     DASYRV010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3296
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2731334"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..245
                     /locus_tag="VGQ24_03805"
     CDS             <1..245
                     /locus_tag="VGQ24_03805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453988.1"
                     /translation="AGADLTHAHLSKTVVARSHDLHHALGLDSLEYFSPSAIDLETLR
                     HCIAGLCDDFLAGTGVEASELEAVRALCSAKILTTG"
     gene            complement(242..499)
                     /locus_tag="VGQ24_03810"
     CDS             complement(242..499)
                     /locus_tag="VGQ24_03810"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEV8453989.1"
                     /translation="MNRLNRKTCEDAFRRLDDFLDRQLSTEEMRLVEEHLQTCDACTR
                     EFAFEASVLKGVKQKLAHLSAPPDLVSRILAQLVSAREGES"
     gene            complement(496..1086)
                     /locus_tag="VGQ24_03815"
     CDS             complement(496..1086)
                     /locus_tag="VGQ24_03815"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEV8453990.1"
                     /translation="MIGSTPATFESLFTAVANSAFGVALRLSRNQADAEDLVQEAALL
                     AFRAFDSFEAGTNFRAWFLKILTNCYYSKRRREKSRPVTSDLDDTPDLYLYARSAEAG
                     FPTQGQDPAQQLLDKVGTERIVAALARLPEEYRVVATLYFMNDLSYEEIAAVLECPVG
                     TVRSRLHRGRKMLQKALWQIAEEDGIIGKRTHRTDV"
     gene            complement(1209..1373)
                     /locus_tag="VGQ24_03820"
     CDS             complement(1209..1373)
                     /locus_tag="VGQ24_03820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453991.1"
                     /translation="MTCPKCGAEMNRHAEKLVYPESAAEARRADPVLGGLIEETHACP
                     ACGNVVARRV"
     gene            complement(1381..1950)
                     /locus_tag="VGQ24_03825"
     CDS             complement(1381..1950)
                     /locus_tag="VGQ24_03825"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEV8453992.1"
                     /translation="MAQNRPLSIPVILGTSRKGRMSCHAARFVYRELQKRDGVSTDLI
                     DIAELEHHLDSNGQGTGDSGFAASMTRADAIVIVTPEYNHAMPGLLKHVLDSCLKEYI
                     HKAAGIVAVSAGPFGGTRVIETSLPVLRELGLVTIFWDVNVGSVAKVFAENGELLDPA
                     FVRRTDKFLSELVWMARTLRHGRENIPLN"
     gene            2028..>3296
                     /locus_tag="VGQ24_03830"
     CDS             2028..>3296
                     /locus_tag="VGQ24_03830"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEV8453993.1"
                     /translation="MGSEPALSGPDLTSGVPISQVPDGGMLAGHAGGKPVLLARSGGE
                     WFAIGAVCSHYSGPLPEGLMVGDTVRCPWHHACFSLRTGEALRPPALNDVSCWRVEQR
                     GDTVYVTGKARKPERAASARRGPESVVIVGAGAAGNSAAETLRREGYEGSLTLYDPDP
                     DVPYDRPNLSKDYLAGTASEDWIPLHPPEFYQERGVRIVHDRRLMAIEPKARRIRLDD
                     GQTREYGALILATGATPVRLPAEMERTTPPVHYLRSFADSKAIIAAAANAKCAVILGA
                     SFIGLEVAASLRARKLEVHVVAPDARPLERIMGTELGGFIQKLHEENGVVFHLRQKAR
                     EIAGRTVTLENGERLESDFVVVGIGVRANVELAERAGLTIDRGVLVDERLQTSAPGVY
                     AAGDIARWPDPHTGEQIRVEHWVVAERQGQA"
BASE COUNT          583 a         1060 c         1048 g          605 t
ORIGIN      
        1 tcgctggagc cgacctcact catgcccacc tgtccaagac ggtggttgcc cggtctcacg
       61 acctgcatca tgcgcttggc ctggattccc tggagtactt cagtccttcg gccatcgacc
      121 tggagaccct gcgtcactgc atagctggac tgtgcgatga cttcttggcg ggaaccggag
      181 tggaggcctc ggaactggag gcggtgcgcg cgctatgctc cgcgaagatc ctcacgactg
      241 gctagctctc tccctcccgc gctgatacca gctgagccag gatacgtgat accaggtccg
      301 ggggggcgga cagatgcgcc agtttctgct tcacgccttt cagcacgctc gcctcgaagg
      361 cgaactcgcg ggtgcaagcg tcgcaggtct ggagatgctc ctccacgagg cgcatttcct
      421 cggtgctgag ctgccgatcg agaaaatcat cgagtcggcg gaatgcgtcc tcacaggtct
      481 tgcgattcag tcgattcata cgtccgtcct gtgagtgcgc ttgccaatga ttccatcctc
      541 ctcggcaatt tgccaaaggg ccttctgcag catcttccgg cctcgatgca gcctggacct
      601 caccgtgccc accgggcact ccagcaccgc tgcgatttcc tcataactca agtcattcat
      661 gaagtagagc gtggcaacga ctcgatactc ctcgggcaga cgggccagtg cggcgacgat
      721 ccgctcggtg cccaccttgt cgagcagttg ctgagccggg tcctggccct gagtcgggaa
      781 gcctgcctcc gcggaccgtg cgtacaggta gaggtccggc gtatcgtcca gatccgatgt
      841 cacaggacga ctcttctccc gtctccgctt ggagtagtag cagttcgtca gaatcttgag
      901 gaaccaggct cgaaagttcg tgcccgcctc gaacgagtcg aacgcccgaa aggccagcag
      961 cgccgcctcc tgcaccaggt cctccgcgtc ggcctggttg cgactcagtc gcagtgccac
     1021 gccaaacgcg gagttggcca ccgccgtgaa cagtgactca aacgtcgccg gcgttgagcc
     1081 gatcacggat tgagacctcg tggtgcctgg aaaggcgtgc gacagctggg ccactgcaga
     1141 tccggattag agggatgttc tcagaaactg ttctctggat tccgcgaatg taagacccct
     1201 gatccggttc agacccgcct ggccacgaca ttcccacagg cagggcaggc atgggtctct
     1261 tcgatcaacc caccgaggac tggatcagcc cggcgcgcct cagccgcact ctcgggatag
     1321 accagcttct ccgcatgacg gttcatttcg gcgccgcact tggggcatgt cataggccgc
     1381 tcaattcaga ggaatgttct cacgcccgtg tcgcagcgtt cgagccatcc agaccagctc
     1441 gctcagaaac ttgtccgtgc gacgcacgaa tgcggggtcg agcagctcgc cattctcggc
     1501 gaagaccttg gccacgcttc ccacattgac gtcccagaaa atggtgacca gtcccagctc
     1561 gcgcagcacc ggcagcgagg tctcgatgac tcgcgttccc ccgaatgggc cggccgatac
     1621 ggcgacgatt cccgccgcct tgtggatgta ttccttgaga cagctgtcga gcacatgctt
     1681 gagcagaccg ggcatggcat ggttgtactc gggagtgacg atgacgatgg cgtcagcgcg
     1741 ggtcatgctc gcggcgaaac cggaatcccc ggtgccttgc ccgttactgt ccaggtgatg
     1801 ttccaactca gcgatatcga tgaggtcggt gctcaccccg tcccgcttct gaagctcccg
     1861 atagacgaac cgtgccgcat ggcagctcat ccggcctttt cgactggttc ccaggatcac
     1921 cgggatgctg agcgggcggt tttgggccaa acggcctcct tgactggggg ttgcaggtgt
     1981 aatgcattac agggtaggga agttccatta catcggaagg agcctcgatg ggcagtgaac
     2041 cagcgctttc cggtcccgat ctcacctcgg gtgtcccgat ctcacaggta cccgatggag
     2101 gcatgttggc gggtcacgcc ggaggcaaac cagttctgct ggcccggtcc ggcggtgagt
     2161 ggttcgccat aggggcggtc tgcagccact atagcggccc cctccccgaa gggctgatgg
     2221 tcggcgacac cgtgcgctgc ccctggcatc acgcgtgctt cagccttcga accggagagg
     2281 ctctccgccc gcccgcactc aacgatgtgt cctgctggcg ggtggagcag cgcggcgaca
     2341 cggtctacgt gaccggcaag gctaggaagc ccgagcgggc cgcctcggcc cgccgcggcc
     2401 ccgagtctgt ggtcatcgtc ggcgccggtg cggcggggaa cagcgccgcc gagaccctgc
     2461 gccgggaggg atacgagggc agccttacgc tctatgaccc ggatccagac gttccctacg
     2521 accgtccgaa cctctccaag gactatctcg ccggcactgc ctccgaagac tggattcccc
     2581 tgcatccccc agagttctat caggagcggg gcgtccgcat cgttcacgat cgccggctga
     2641 tggccatcga gcccaaggcg cggcgaatcc ggctcgacga tgggcagacc cgggagtatg
     2701 gtgcgctgat cctcgctacc ggggcaacgc cggtgcgcct ccccgccgag atggagcgga
     2761 ccaccccacc ggtgcattac ctgcgcagct tcgccgacag caaggcaatc atcgcggccg
     2821 cggcgaacgc caaatgcgcc gtgatcctcg gagccagctt catcggcctc gaggtggccg
     2881 cctcgttgag agcacgtaag ctggaggtcc atgtggtggc gccggacgct cggccgctgg
     2941 aacggatcat gggcaccgaa ctgggcggct tcatccagaa gctgcacgag gaaaatggcg
     3001 tcgtgttcca tctccggcag aaggcgagag agatcgccgg ccgtacggtc acgctggaga
     3061 acggcgagcg gctggagtcg gacttcgtgg tggtggggat cggcgtccgg gccaacgtgg
     3121 agctggccga gcgcgccggc ctgacgatcg accgcggggt gctggtagac gagcggctcc
     3181 agaccagcgc accgggagtt tatgcggcgg gggacatcgc tcgctggcct gacccgcaca
     3241 ccggcgagca gatccgggtc gagcattggg tggtggccga gcgtcagggt caggcg
//
LOCUS       DASYRV010000152        12636 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1067789, whole genome shotgun sequence.
ACCESSION   DASYRV010000152 DASYRV010000000
VERSION     DASYRV010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12636
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1067789"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..322
                     /locus_tag="VGQ24_03835"
     CDS             <1..322
                     /locus_tag="VGQ24_03835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453994.1"
                     /translation="QKKDMRQIIMITDGKPSALTMPDGRIYVNSMGLDPQILQATYRE
                     VANCRRNGIMINTFMLARDRSLVEFVKQVASICKGKAYFTNTMTLGQFILMDFMKRKT
                     RRVS"
     gene            346..822
                     /locus_tag="VGQ24_03840"
     CDS             346..822
                     /locus_tag="VGQ24_03840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8453995.1"
                     /translation="MTRRTTFLALLILSMPACRPGGEGVRDPGKPTPVAGPAVGPAAS
                     PQTGRPGPGGAGGLPEEPSLPGRADQAPLVRVQEALAIDSLLGRRVRVAGRCTAAGEG
                     RRAGSWTLEDAGSSIEVRGLVPSSCAAQSSAEVVIFAQIEPASSGSRERLLLRLPD"
     gene            825..1529
                     /locus_tag="VGQ24_03845"
     CDS             825..1529
                     /locus_tag="VGQ24_03845"
                     /inference="COORDINATES: protein motif:HMM:NF015146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEV8453996.1"
                     /translation="MTDSFQELADRIASCELCPRLRFHCSKIARARKREYASQTYWGR
                     PVPGFGDPEARLLIVGLAPGAHGSNRTGRVFTGDASGVWLYEALHRYGWANQPSAWTR
                     NDGLTLTDCYITAAARCAPPENRPTADELDRCRPYLQEELRLLTRVRVVLALGRIGWE
                     SWLRAAGWWARLAPRERPNFGHGAEAVLPDGTALVASFHPSRQNTNTGRLTRPMWNGV
                     FERIRTIVPSVPLQPA"
     gene            complement(1489..2958)
                     /locus_tag="VGQ24_03850"
     CDS             complement(1489..2958)
                     /locus_tag="VGQ24_03850"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEV8453997.1"
                     /translation="MTRRLAYISLLVPALALGTGVGSCARNPVTGKSELSLVSESQEI
                     ELGKQSAQEVAQTIGLYDDANAQAYVAEIGKPIAASSERPNLPWEFHVVDDASVNAFA
                     LPGGFIYVTRGLMTTINDEAEFATVLGHEIGHVTNRHSVQMISKSQLAQLGLGIGSIL
                     SSDIAKFGQLASAGLQVLFLKYSRDAENQADQAGFRYALNQGYDVREMPKVFQTLDRI
                     GQTSGGGGKLPEWLATHPNPGNRIKHIETMLDTVHTDLSKAKVNQDGYLQRIKGMTYG
                     EDPQQGYFEGTQFYHPKMRFQLRFPDGWQVQNTPAAVASLSPNQDAIIQLSLAGQTSP
                     QQAAQQFLSQQGIQAGQMSNASINGLPATSSYFQAQTQEGTIEGIVSFISYGGQTFGL
                     MGYTPGGKLGTYDRVFQSTIRSFSELRDASKINVQPAKIELVKVNRDMTLEQFNAQYP
                     SSVPIEQVAIINELEGPSTVLPAGRLVKRVVGGRKAQSS"
     gene            complement(3136..3729)
                     /locus_tag="VGQ24_03855"
     CDS             complement(3136..3729)
                     /locus_tag="VGQ24_03855"
                     /inference="COORDINATES: protein motif:HMM:NF016764.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0031267 - small GTPase binding [Evidence
                     IEA];
                     GO_process: GO:0006888 - endoplasmic reticulum to Golgi
                     vesicle-mediated transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Yip1 family protein"
                     /protein_id="HEV8453998.1"
                     /translation="MNLVDRVKRILLSPRTEWEVIDPEQTTPAALYTGYVAPLAAIGP
                     IAQLIGHTVFGIPVPFVGTIKVPFGSALTGAVIGYVLTLVGTYVLALIIDALAPTFDG
                     QRNQIQALKVAAYSSTAAWVAGIFALIPWLGVLGILGLYSLYLLYLGLPVLMKAAREK
                     ALPYTAVVILAAIVLFMVIGMIVGRFTGIPHAGTTMP"
     gene            3922..4551
                     /locus_tag="VGQ24_03860"
     CDS             3922..4551
                     /locus_tag="VGQ24_03860"
                     /inference="COORDINATES: protein motif:HMM:NF025701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease complex subunit PrcB family protein"
                     /protein_id="HEV8453999.1"
                     /translation="MIPRRYGILFPLAALMACARGTTMRVAPDEGSGDAPVALAPTPE
                     PGPNELSGDTVTKTPPGETDSLSTEATGEKGYAAYANGGNLELRRIGQWTRTGVGEAR
                     RLIIRDANAWADFWSELGVGERPAVDFTRDVVVAVAAGQRPSGGYEIAVEQVRQVNGE
                     LAVEVVETTPGPNCMTTASLTQPVDVIVVPALTARSWSFVERKEVRGCR"
     gene            4780..6957
                     /locus_tag="VGQ24_03865"
     CDS             4780..6957
                     /locus_tag="VGQ24_03865"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEV8454000.1"
                     /translation="MSSNPSRTVAPLTAPSGTTPGFIETETLPATAQAELAPPVARVV
                     PRVETLHGELRVDDYFWLRDRGDPAVVAYLEAENRYTAGVMRHTEGLQERLYQEMRRR
                     IKETDLSVPERVDDYRYYSRTEAGGQYPILCREHGEHGDEEILLDQNPLAAGHGYFRL
                     GTSAVSPDHRLLAYSVDTSGAEEFTLYIKDLATGSLFAESIVNTSHGVAWANDSRTLF
                     YTGLDEAHRPCRLYRHLVGTNLSEDVLVYFEPDASFFLDISRTRSRAYLLLDISSHST
                     SEVRFVSADRPGDPFRTVQPRAPGIEYTVTHHGDRFFITTNDTASNFRLVQAPVATPG
                     REHWSPVLPYRPQVKLDSTDAFREHLVVYERESGLRQIRVLDLASGGEHLISFPEPVY
                     TVRAHDNPEFDTTLLRFTYTSLVTPSSVVDYDLAGRTWTVRKQTEVLGGYDPTLYRSE
                     RLFATAADGTAVPISLVYRIPLQLDGQRPLLLNGYGAYGLSYDPTFSSNTLSLLDRDF
                     VVAIAHVRGGEEMGRAWYEGGRLLNKRSSFTDFIAAAEYLIGKGYSSADRLVINGGSA
                     GGLLMGAVTNMRPELFRVVLAEVPFVDVVNTMLDASLPLTVIEYDEWGNPNDPAAYEY
                     IRSYSPYDNVQSRDYPHMLVTAGLNDPRVAYWEPAKWTAKLRARKTDENRLLLRTNMG
                     AGHGGASGRYDYLREVAFKYAFVLDVLGAGSSQLTTTPIAASA"
     gene            complement(6926..7408)
                     /locus_tag="VGQ24_03870"
     CDS             complement(6926..7408)
                     /locus_tag="VGQ24_03870"
                     /inference="COORDINATES: protein motif:HMM:NF016089.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TQO small subunit DoxD"
                     /protein_id="HEV8454001.1"
                     /translation="MRLPGEILQGILARAALALLRVYLGVIFLIAAIPKVMEDFTPGL
                     TAFLQRRAMEQSHLFYRQFLQEVVLPNAWLFAGLVTWGELLVGVSLILGLMTRLSATV
                     ALLLTLNYMFAKGAWPWTPSSHDAAFAAMSLALVIGAAGRTFGLDSMLAKRWPRSALW
                     "
     gene            7545..7991
                     /locus_tag="VGQ24_03875"
     CDS             7545..7991
                     /locus_tag="VGQ24_03875"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEV8454002.1"
                     /translation="MRVYQIMTPDPACCTPESTAQDAALLMKTHDCGSIPVVEKVETR
                     RIVGTVTDRDLAIRGLAAGRGPDTRIRELMTNGPITAAPEDEVEIVREVMIAQQVRRV
                     PVVDENGAVVGIVSQADLALEDGAASDQEVGRIVEAISDPRRELPE"
     gene            complement(8008..9090)
                     /locus_tag="VGQ24_03880"
     CDS             complement(8008..9090)
                     /locus_tag="VGQ24_03880"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HEV8454003.1"
                     /translation="MADATSLVVFVLLSLACHGPLSPFLPAAFEPVLLFYGKLYSPLA
                     VALLGAVAATAAEYLNYYLYRALLDCRSLDRLMRSNGARPVTALFARQPFLAIWVCAW
                     SPLPDWAARILASHSRYPVHRYLAAFVAGRIPKFWFLAAVGSYWMPSGWTVIAIAAGS
                     VLVTLVGTLRRRTRRVTGAAIASVAEVAMKTALLACLGFSLISSPEPLAAQEPAGSRL
                     EGISRGVSMDRFIYEGDGETALSFRLSDLRPGRLGPELSVSAFPRALAARVLLFAPDF
                     GAAYNLSFPYATLLIKAGGSALTGLATDVVFVPGAHLGAGLVVRIDDRTGIRIDAARH
                     FYMSSGETEGIWSIGFGFAALRPPRP"
     gene            complement(9083..9886)
                     /locus_tag="VGQ24_03885"
     CDS             complement(9083..9886)
                     /locus_tag="VGQ24_03885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454004.1"
                     /translation="MITLLSALIGLLAGVHAATWGMYKDAPHEGFSRRKYARSPVLGA
                     VLGAVVAAATGLDPRHAAGAVVLFGVVYAIERALAEIYKTFLREEDQSKYFIPMQFHV
                     LGTVVSSRPARLIAGALYTALLLGLIGFVAHLDRIAAGRYPIEIVLLVGGMGGWISAF
                     GGAWKDAPSEGFQTLKFFRSPVLAALFAGGLAGLSDSLLLVTLAATGYTVATTETYKT
                     FFFPSKPRGKFAGKPVHYPEMLLHRQRFVLPYAAIWAGLLLAAMEAARG"
     gene            complement(9883..10869)
                     /locus_tag="VGQ24_03890"
     CDS             complement(9883..10869)
                     /locus_tag="VGQ24_03890"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEV8454005.1"
                     /translation="MPHPPVNLAFLGCGGITQTHSRTLRSFRSAVHCFYASREPARAA
                     ASAQRFGGAGSFGSYAAALVDERIDTVLVATPPDSHLELTLAGLRHGKNVIVEKPAFL
                     RTADYALVRAAEAHSCRRVLVAENYCYKPLAYTLRRIVGSGLLGEVRFVELNATKYQS
                     PVGWRGDPTAAGGGALFEGGIHWIDLLANLGLRIEAVHGFRPGDWRAQERSMLVVAEY
                     EDGAIGTLTHSWEIPSPLRGLRFSHIYGTRGSVSFESNGLFVLITGRRPRLLFPGIRD
                     INGYQAMFRDFVAALQTGTEPVMSLARAQRGLELIEAAYKNVTAPPELEAVP"
     gene            complement(10850..12457)
                     /locus_tag="VGQ24_03895"
     CDS             complement(10850..12457)
                     /locus_tag="VGQ24_03895"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEV8454006.1"
                     /translation="MSDRLWYGGHEHYDAIVIGSGFGGAMTAHVLVESGWSVLMVERG
                     DWVARGPQNWAPDGVGQMTSHYSSESPYRVMTETGETHAGAFHCVGGPSVFYGGVAFR
                     FRAEDFEQDPEVAGSSGARWPWTYHEVEPYYTEAEQILGVAGDTGVDPTEPYRSAAYS
                     EAPAELAPVSRRIERAARELGYRPFRLPLAINRRVRPDRGACIGCGTCDGFACAVGAK
                     NDLATAVLGPLVRRGLHLRVNAVATRLHADRGRVTGVEIRDRRTGEATVSRADMVVLA
                     AGALATPQLLLASGLQRLNPGGHVVGRYLMRHYNKIVFGIFPQPPNPSGGFHKQLAIH
                     DCYFGDTTLRYPRGKLGGIQQLATPPVGLVRAQLPPVIGSTCARWVDHLTGLLTIAED
                     QPQYENRVLLDGVATDGVGLPRLQITHRYSERDRAASRALVERASAILRRAGAWALYR
                     HRIDTFSHAVGTVRMGADPRTSALDPECRFRGLENLYVVDGSVMPTSAAVNPSLTIAA
                     NALRAAHRLAGHSSPIQEPASYAASAG"
BASE COUNT         2376 a         3993 c         4116 g         2151 t
ORIGIN      
        1 acagaagaag gacatgcgcc agatcatcat gatcaccgat gggaagccct cggcgctgac
       61 catgccggac ggtcgcatct acgtgaactc gatgggattg gacccgcaga tcctgcaggc
      121 cacctaccgg gaagtggcca actgccggcg caacggcatc atgatcaaca ccttcatgct
      181 ggcgcgtgac cgcagcctgg tggagttcgt caagcaggtc gcctccatct gcaaggggaa
      241 ggcatacttc accaacacta tgaccctggg gcagttcatt ctgatggact tcatgaagcg
      301 aaagacccga cgagtctcgt agagacccgc tgttcaaggc ccgccatgac ccgacgcaca
      361 accttcctcg ccctcctaat tctctcgatg cccgcgtgcc gcccgggggg cgagggcgtg
      421 cgtgatccag ggaagcccac accagtcgcg gggccggccg ttggtccggc agcttcccct
      481 cagaccggtc gtcctgggcc gggaggggcc ggtgggctgc cggaggagcc atcgctcccg
      541 ggacgagcgg accaggctcc tctggtgcgg gtgcaggagg cgctggccat cgatagcctg
      601 ctcggccgcc gggtccgagt cgccgggcgc tgcacagcgg caggggaggg gcggagagca
      661 ggatcctgga cgttggagga tgccgggtcc tcgatcgagg tacgcgggct cgtcccttcc
      721 tcctgcgccg cgcagtccag cgccgaggtg gtcatcttcg cgcagatcga gcccgcctcc
      781 agcggcagcc gagagcgtct tctgctccgc cttcccgatt agtcgtgacc gactctttcc
      841 aggagctggc tgaccggatt gccagttgtg agctctgccc ccgtttgcgc ttccactgca
      901 gcaagatcgc gagagcgcgg aagcgggagt acgcatccca aacgtactgg gggcgcccgg
      961 tgccggggtt cggcgacccg gaggcccggc tactcatcgt cggccttgcg cccggcgctc
     1021 acggaagcaa ccggacgggc cgcgtcttta ctggcgatgc cagcggcgtc tggctgtacg
     1081 aggcgctgca ccggtacgga tgggccaacc agccaagcgc gtggacccgt aacgatggcc
     1141 tgaccttgac cgattgctac atcaccgcag cggcccggtg cgcgccaccg gagaatcgtc
     1201 cgacggctga cgagttggat cgctgccgcc cttacctcca ggaggagctc aggcttctta
     1261 ccagggttcg agtggtgttg gcgttaggga gaatcgggtg ggagagctgg ctccgggccg
     1321 ccggttggtg ggcccggctt gctcctcggg agcgacccaa cttcggtcat ggggcggaag
     1381 cggtccttcc agacgggacg gcgctggtcg cttcgtttca ccccagccgg cagaacacca
     1441 acacggggcg gcttacccgc cccatgtgga acggcgtctt cgagcgcatc aggacgattg
     1501 tgccttccgt ccccctacaa cccgcttgac caggcgccca gccggaagca ccgtcgaggg
     1561 cccctccaat tcattgatga tcgcgacttg ctcgatcggt acacttgagg ggtactgcgc
     1621 gttgaactgc tccagtgtca tgtcccggtt gaccttcacc agctcgatct tggccggttg
     1681 aacattgatc ttggaggcat cccgtagctc gctgaagctc ctgatagtgc tctggaaaac
     1741 ccggtcgtag gtgcccagct tgccgcccgg cgtgtagccc atcagaccga aggtttgtcc
     1801 cccgtaagaa atgaaggaga caatcccctc gatggtgcct tcctgggtct gagcctggaa
     1861 gtagctcgaa gtggcaggga gcccattgat gctggcattg gacatttgac ctgcctggat
     1921 accctgctgg gacaggaact gctgcgctgc ctgctgcggc gaggtctggc cggccaagct
     1981 cagctggatg atcgcatcct gattagggct cagggatgcg actgcagccg gcgtgttctg
     2041 cacctgccac ccgtcgggaa agcgcagctg gaaacgcatc ttcggatgat agaactgggt
     2101 cccttcgaaa taaccctgct gcggatcttc gccgtaggtc atccccttga tgcgctgcag
     2161 gtacccatcc tggttgacct tggccttgct gagatccgtg tgtaccgtgt ccagcatggt
     2221 ctcgatgtgc ttgatccggt tcccggggtt cgggtgagtc gccagccact cagggagctt
     2281 gccgccacca ccactagtct gaccgatccg gtcgagagtc tggaatacct tgggcatttc
     2341 cctcacgtcg tatccctggt tcaacgcgta gcggaacccg gcctggtcgg cctgattttc
     2401 cgcgtcgcgg ctgtacttca ggaatagaac ctggaggccg gcactcgcga gctgcccaaa
     2461 cttcgcgatg tcggacgaaa ggatgctccc gattcccagc cccaactggg ccagctgcga
     2521 cttactgatc atctgcaccg agtggcggtt ggtaacgtgc ccgatctcgt gcccgaggac
     2581 ggttgcgaat tcggcttcgt cgttgatcgt ggtcatgagg ccccgggtta cgtagatgaa
     2641 gccccctggc agcgcgaacg cgttcaccga agcgtcatcc accacgtgga attcccaagg
     2701 taaattgggt cgctcggaac tggcggcgat cggtttccca atctcggcga cgtacgcttg
     2761 agcgttggca tcgtcataca ggccgatcgt ctgggctact tcctgggcgg actgcttgcc
     2821 cagttcaatc tcctgagact cggagacgag ggacagttca cttttcccgg tcaccgggtt
     2881 ccgcgcacaa ctgcccacgc cggttcccag agccagggcc gggacgagca gactgatata
     2941 ggctaagcga cgagtcatag gagcttcctc gggttctcgt tcgatcgccg gatcattcgt
     3001 tccgtagccg acttagcgcc gggcgaagcg gcaattctac tatccagacc agatccgggc
     3061 tgtgatccgc atcgcctggg aacgtcgagc cccgtggggc agcccgcggg accctccccc
     3121 cgtcggatgg cgagatcagg gcatcgtcgt ccctgcatgc ggtatgccgg taaaccgtcc
     3181 tacgatcatg ccgatgacca tgaacagaac gatggcggcg agaatgacca cggccgtgta
     3241 cggaagcgcc ttctctcgcg ccgccttcat gaggaccggc aggccaagat aaagcaggta
     3301 caggctatag agaccgagaa ttccgagaac cccgagccag ggaatgagtg cgaagatgcc
     3361 ggccacccat gcagcggtgc tggagtatgc cgcgaccttg agcgcctgga tctgattgcg
     3421 ctgaccatca aaggtgggtg cgagtgcatc gatgatgagt gcgaggacat aggtgcccac
     3481 cagcgtcaac acatagccga taaccgcgcc ggtgagcgcc gagccgaacg gcaccttgat
     3541 ggtacccaca aaggggacgg gaatcccgaa aacggtgtgt ccgatcagct gggctatggg
     3601 cccgatggcg gcgaggggcg caacatagcc ggtgtagagg gctgccgggg tggtctgctc
     3661 cgggtcgata acctcccact cggtgcgggg cgaaagcagg attcgcttga cacgatcgac
     3721 gaggttcatc gcgttctcct tgagagcggg caggcgcggg ctacagaaac agtgggtata
     3781 gtgcggccgg aatggccagg cgtctagtac gtgtgacaga ggtcacctgg actgggagac
     3841 ggccaagttc gcgagacgcc gtgcattcac gtacgttatg agtgactgac gaaacgcctc
     3901 gcaccacaga tggagcgacc aatgatccca cgacgctacg gaatcctgtt cccgctcgcc
     3961 gccctgatgg cctgcgcccg gggcacgacc atgcgggtgg caccggacga gggcagcggt
     4021 gacgcgcctg tcgccttagc tccgacgccc gagcccgggc ccaacgagct gtcgggcgat
     4081 accgtgacga agacgcctcc gggagagacg gatagcctct cgaccgaggc gaccggagag
     4141 aagggctatg ccgcctacgc caacgggggc aacctcgagc tcagaagaat cggacagtgg
     4201 acccgcaccg gcgtcggcga agctcgtcgc ctcatcatcc gggacgccaa tgcctgggct
     4261 gatttctggt ccgagctggg cgtgggtgaa cggccggccg tcgattttac tcgcgacgtg
     4321 gtcgtggccg tcgcggccgg acagcgtcca tctgggggtt acgagatcgc ggttgagcag
     4381 gtgcgccagg tcaacggcga gctcgccgtc gaggtggttg aaaccacccc gggacccaac
     4441 tgcatgacga cggcgtccct gacacaaccg gtggatgtta ttgtagtgcc ggcgcttacg
     4501 gccaggagct ggagctttgt ggagcgaaag gaagtacggg gctgccgcta gggagcctat
     4561 cttcgtgcgg taaccggaca tccgtacttg tcgccggcgt ggcatcgaaa tagaccgggg
     4621 gagctcctta tcgagcatag gtaagtggct gcggcggagt gagttacttg agacttgact
     4681 tgctccccgc gctcgtcgta attcacccca ggacctactc tggggtccac ctcacgccag
     4741 tccggtggac caccgagtct ccggggaacg aaactttaga tgtcgtccaa tccgagtcgc
     4801 accgtcgcac cccttaccgc tccttccggc acgaccccag gattcatcga aaccgagact
     4861 ctccccgcga ccgctcaagc agagctggcg ccgcccgtgg cccgagtcgt tccccgagtc
     4921 gaaaccctgc atggcgagct tcgggtggac gattacttct ggcttcggga ccgcggcgat
     4981 ccggcagtgg tggcctacct cgaagcggag aatcgctaca cggctggtgt catgcgccat
     5041 acggagggcc ttcaagagag gctctaccag gagatgcggc ggcgcatcaa ggagaccgat
     5101 ctctcggttc cggagcgggt cgacgactac cgctactaca gccgcacaga ggccggcggc
     5161 caatatccga tcctttgccg cgagcacggc gagcacgggg acgaggagat cctacttgat
     5221 cagaacccgc tggcagcggg tcacggctat ttccgtctcg ggacgagcgc ggtaagcccg
     5281 gatcaccggc tcctggccta ttcggtggat acctcgggag ccgaagagtt cacgctctac
     5341 atcaaggacc tcgccaccgg atcgctgttc gccgaaagca tagtgaacac gtcccatggc
     5401 gtcgcatggg ctaacgatag ccgcaccctc ttctacaccg ggctcgacga ggcccaccgc
     5461 ccttgccgcc tgtatcggca cctggtggga acgaacctct ccgaagatgt gctggtgtac
     5521 ttcgagccgg acgcgtcctt cttcctggac atcagccgga cccggagccg cgcctacctg
     5581 ctgctggaca tctcgagcca ttcgacgtcc gaggtgcgat ttgtgagcgc cgatcgcccg
     5641 ggggatccct tccgcaccgt gcagccgcgg gcgcccggca tcgagtacac cgtcacccac
     5701 cacggcgacc ggttcttcat cactaccaac gacactgcct cgaacttccg gctggtacag
     5761 gctccagtcg ctacgccagg gcgggagcac tggtcgcccg tgctacccta ccgtccccag
     5821 gtgaagctgg actcgaccga tgctttcagg gagcacctcg tcgtctacga gcgcgagtcg
     5881 gggctgcggc agatccgggt gctcgatctc gcgtcgggtg gggagcatct catctccttc
     5941 cccgagccgg tctacacagt tcgtgctcat gacaatccgg aattcgacac tactctactc
     6001 cgtttcacct atacgtcgct ggtcacgccg agttcggtag tcgactatga cctggcaggg
     6061 cgcacgtgga ccgttcgaaa gcagaccgag gtgcttggcg gctacgatcc cacgctgtat
     6121 cggagcgagc gtctgttcgc caccgccgcg gacggaacgg cagtgccgat ttccctggtc
     6181 taccggattc cgcttcagct cgatgggcag cgcccgctgc tgctcaacgg gtacggggct
     6241 tacggcctga gctacgaccc cacgttctcc tccaacacgt taagtctatt ggaccgggat
     6301 ttcgtggtcg cgattgccca cgtgcgaggc ggagaggaga tggggcgggc atggtatgag
     6361 ggcggacgtc tgctcaacaa gcggagcagc ttcaccgatt tcatcgcggc ggccgagtat
     6421 ctcatcggca aaggctacag cagcgcggac cggctcgtca tcaacggagg gagcgctggc
     6481 gggctgctga tgggggcggt gaccaacatg cgcccggagc tgtttcgtgt cgtgctggcc
     6541 gaggtgccgt ttgtggacgt ggtgaacacc atgctcgatg catccttgcc gcttaccgtc
     6601 atcgagtacg atgaatgggg taatccgaac gaccccgcag cgtatgagta catccgctcg
     6661 tactccccgt acgacaacgt gcaatctcgg gactaccccc acatgctggt gactgccggt
     6721 ctcaacgacc cgcgggtggc ctactgggag ccggccaagt ggaccgccaa gctgagggct
     6781 aggaagaccg acgagaaccg acttctcctg aggaccaaca tgggggcggg ccacggcggg
     6841 gcatcgggcc ggtacgacta cctgcgagag gtagccttca agtatgcgtt tgtgcttgat
     6901 gtgctcggag ctgggagctc ccagctcacc acaacgccga tcgcggccag cgcttagcca
     6961 gcatcgaatc cagaccgaat gttcgccctg cggcaccgat caccagcgcc agggacatgg
     7021 cagcgaatgc cgcatcatgg ctggagggcg tccaaggcca ggcccctttg gcgaacatgt
     7081 agttgagggt gagcagcagc gctaccgtgg ccgagagccg ggtcatcaac ccgaggatca
     7141 gcgaaactcc caccagtaac tctccccagg taaccagccc cgcgaagagc cacgcattcg
     7201 gaagcaccac ctcctgcagg aactgccggt agaacaggtg gctctgctcc atggccctcc
     7261 gctgcaagaa cgccgtgagc cctggagtga aatcctccat caccttgggt atggccgcga
     7321 tcaggaaaat cactccgaga tacacccgta gcagtgccag cgcggctcga gccaggatgc
     7381 cctgaaggat ctcgccggga agcctcatgg cgcctcgcga gtcacgaagt gaaatggagt
     7441 gatggtagct gccccgcaga accagggcac cgaaagttac gcaggtcacg gcacggttgg
     7501 ggagacgatg cagattgggg atgtctcgat aacctggagg aagcgtgcga gtgtaccaga
     7561 tcatgacgcc cgacccggcc tgctgcaccc ccgagagcac ggcccaggat gcggctttgc
     7621 tgatgaaaac gcacgattgt ggctcaatcc cggtggtgga aaaggtcgag acccggcgaa
     7681 tcgtcgggac ggtgaccgat cgcgatcttg ccatacgcgg cctcgcagcc ggtcggggac
     7741 cggatacgcg gattcgcgag ctgatgacca acggccccat caccgctgcc ccggaggacg
     7801 aggtcgagat cgttcgggag gtcatgatcg cgcagcaggt caggcgggtg cccgtcgtgg
     7861 acgaaaacgg agcagtggtg ggtatcgtgt cccaggcgga cctcgcgctg gaagatggag
     7921 cggcgagcga ccaggaggtc ggccgcatcg tcgaagcgat ttcggatccg cggcgcgagc
     7981 tgccggagta gcaggagcag gtgccaatca gggtcgcggt gggcgaagcg ccgcgaaccc
     8041 gaacccgatg ctccagatgc cttcggtttc cccgctgctc atgtagaagt gccgggcagc
     8101 gtctatccga atccccgttc ggtcgtcgat ccgtacgacg aggcctgctc ccaggtgggc
     8161 accggggaca aacaccacgt cggtcgcgag gcccgtgagg gcactgccac cggccttgat
     8221 cagcagggtg gcatacggaa acgagaggtt ataggctgcc ccaaaatcgg gggcgaagag
     8281 cagcactcgc gccgcgagcg ctctagggaa ggccgacacg ctcaattcag ggccgagcct
     8341 tcccggtcgc aagtcggaga gccggaacga aagggccgtc tccccgtctc cttcgtagat
     8401 gaagcgatcc atgctcacgc ctcgggagat tccctcgagc cgtgacccgg ctggctcctg
     8461 agccgccagt ggctccggtg agctgatcag agagaatccc aagcacgcca gcagcgctgt
     8521 tttcatcgca acctccgcaa cggaggcgat tgccgcgccg gtgacccgcc tcgtacggcg
     8581 gcggagtgtc ccaaccaatg tgacgagtac ggatcccgcc gcgatcgcga tcacagtcca
     8641 accggagggc atccagtacg agccgactgc agcgaggaac cagaacttgg gaatcctgcc
     8701 ggcgacgaac gccgccaggt agcggtgcac cggatagcgg gaatgggagg ccaggatcct
     8761 ggcagcccag tccgggagtg gtgaccaggc gcagacccat atggcaagaa acggctgccg
     8821 ggcgaataag gcggtcaccg gccgggcgcc attacttctc atcagccgat ccagcgaccg
     8881 gcagtcgagc agcgctcgat agaggtagta attcaagtac tccgctgccg tcgcggcgac
     8941 ggcgccgagt agcgccaccg ccagcggaga gtagagcttg ccatagaaga gcaggaccgg
     9001 ctcgaacgcc gcaggtagaa acggcgagag tgggccgtgg catgcgagcg acaggagcac
     9061 gaacacgacc agggacgttg catcagccac gggcggcctc catcgcggca agcaacagcc
     9121 ccgcccagat ggcggcgtac ggcagcacga aacgttgccg gtggagcagc atctccgggt
     9181 agtgcaccgg tttgccggcg aatttaccgc gtggtttcga gggaaagaag aatgtcttgt
     9241 acgtctcggt ggtggcgacg gtgtagccgg ttgcggcgag tgtgaccagc aacaaactgt
     9301 cgctcaggcc ggcgagtccc ccggcgaaaa gcgcggccag aacggggctg cggaagaact
     9361 tcagggtttg aaagccttct gagggggcat ccttccaggc acccccgaac gcactgatcc
     9421 aacctcccat gccaccgacc agcagcacaa tttcgatcgg atatctgccg gcggcgatcc
     9481 ggtccaggtg ggctacgaac ccaatcagcc cgagcagaag cgcggtgtac agggcgccgg
     9541 caatcagtcg tgccggccga ctgctgacca ccgttcccag cacgtggaac tgcatcggga
     9601 tgaaatactt ggactggtcc tcctcccgca ggaacgtctt gtagatctcc gcgagggcgc
     9661 gctcgatggc atacacgaca ccgaacagca cgacggcgcc ggcggcgtga cgggggtcga
     9721 gtcccgtagc ggccgcgacg accgcaccca ggacggcgcc caggactggg ctgcgggcgt
     9781 acttgcgccg ggagaatccc tcgtggggcg cgtccttgta catcccccat gtcgccgcgt
     9841 gcacacctgc cagcaggcct atcaacgccg acagaagggt gatcatggaa cggcctccag
     9901 ctcgggggga gccgtcacgt ttttgtaggc ggcctcgatc agctcgaggc cacgctgcgc
     9961 gcgggcaagg gacatgaccg gctcagtccc ggtctgaagc gcggcgacaa agtcgcggaa
    10021 cattgcctgg tagccgttga tgtcgcggat gccggggaag agaagccggg gtctgcgacc
    10081 ggtaatcagg acgaagaggc cgttcgactc gaagctgacg gacccacgtg tgccgtagat
    10141 gtgagagaac cggagacccc tgagcggcga cggtatctcc cacgaatgcg tgagggtgcc
    10201 gatggctccg tcctcatact ccgcgaccac cagcatgctc cgctcctgcg cccgccagtc
    10261 tcccggccgg aagccgtgca ccgcctcgat ccgaagaccg aggttggcga gcagatcgat
    10321 ccagtggatt cctccctcga agagggctcc gcctcctgcc gccgttgggt ccccccgcca
    10381 cccgacgggg gactggtact tcgtcgcgtt gagctccacg aaacgcacct cgcccagcag
    10441 gccggagccg acgatccggc gcagggtgta cgcgagcggt ttgtagcagt agttctcggc
    10501 caccagcact cgccggcagc tgtgcgcctc cgcggctcgt accaaggcat agtccgctgt
    10561 ccgaaggaag gccggcttct ccacgatcac gttcttccca tggcggagcc cggccaacgt
    10621 gagctcgagg tgtgagtccg gcggggtagc caccagaacg gtgtcgatcc gctcatccac
    10681 caacgccgcg gcgtacgacc caaacgaccc ggctcccccg aaccgctgag ccgatgctgc
    10741 ggctctggca ggctcccggc tggcatagaa gcagtggacc gccgatcgaa agcttcggag
    10801 ggtacggctg tgggtttggg tgatcccgcc gcagccgaga aaggcgagat taaccggcgg
    10861 atgcggcata ggacgcaggc tcctgaatgg gggatgagtg cccggccaac cggtgagcgg
    10921 cacgcaaggc gttggcggct atcgtcaggc taggattgac cgcggccgaa gtcggcatca
    10981 cgctgccgtc caccacgtag aggttctcca gaccccggaa gcggcactca ggatcgagcg
    11041 ccgaggttcg cggatcggcg cccatgcgta cggtgccgac cgcgtgggaa aaggtgtcga
    11101 tgcggtgccg gtacagggcc caggctcccg cgcggcggag aatggcgctg gcacgctcca
    11161 ccagagcacg gctggccgcc cggtcccgtt cgctgtaacg atgagttatc tggagtcgtg
    11221 gcaggccaac accgtcggtg gcaacgccgt ccaaaaggac ccggttctcg tactgtggct
    11281 ggtcttccgc gatggtcagg agaccggtga ggtggtccac ccatcgcgcg caggtggatc
    11341 cgatgaccgg ggggagctgg gctcgcacca gaccgaccgg gggagtagcg agctgctgta
    11401 tgcctcccag cttcccccgc ggataccgga gcgtagtgtc cccgaagtag caatcgtgaa
    11461 tcgccagttg cttgtgaaac cctccactgg gattcggtgg ctgcggaaag atgccgaaga
    11521 cgatcttgtt gtaatgccgc atgagatatc ggccgacaac atgccccccg gggttgagcc
    11581 gctgaagccc cgatgcgagc aacagctggg gagtcgcgag agccccggcg gcaagcacca
    11641 ccatgtcggc gcgagacacc gtcgcctcac ctgtacgacg gtcccggatc tcgaccccgg
    11701 tgacacggcc tcgatcggcg tggagccggg ttgctacggc gttgacccgc aggtgcagtc
    11761 ctcgcctgac cagcggtcca aggacagcgg ttgccagatc gtttttcgcg ccgaccgcac
    11821 aggcgaaccc gtcgcaagtg ccgcagccga tgcaggcgcc ccgatcgggc cgcacacggc
    11881 gattgatcgc caagggaaga cgaaagggcc gatagccgag ctcgcgagcg gcgcgctcga
    11941 tccgccgcga aaccggagcc agctctgcgg gagcctcgga ataggcggcg ctgcggtacg
    12001 gctcggtcgg atccactccg gtatcgccgg cgacgccgag aatctgttcg gcttccgtgt
    12061 agtagggctc cacctcgtgg tacgtccacg gccagcgtgc tcctgaggag cccgcgacct
    12121 cggggtcctg ctcaaagtcc tcggcccgga accggaaggc gacgccgcca tagaagactg
    12181 acgggccgcc aacgcagtga aacgcacccg catgggtttc tcccgtttcg gtcatgactc
    12241 ggtaaggtga ttcactcgag tagtgcgagg tcatctgccc taccccatcg ggggcccagt
    12301 tctgcgggcc gcgcgccacc cagtcgcccc gctccaccat gagaaccgac cagcccgact
    12361 cgaccagcac gtgcgcggtc atcgcgccgc cgaagccgct gccgatgaca atcgcatcgt
    12421 agtgctcatg gcctccgtac cagagtcgat cgctcatgca ccggcctccg agaagtgtgg
    12481 ttccaatctt ccaggaggcc gttgcctatt cgtggcgttg agcgtgaccc gcccgaagtc
    12541 ggctgggtca cgggtcttga gtggcgtcca ttctctggag taccgcgctc caggaggcgg
    12601 cgagggcgtt tggcgaaggc attgctgttc attgga
//
LOCUS       DASYRV010000153         4814 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1719124, whole genome shotgun sequence.
ACCESSION   DASYRV010000153 DASYRV010000000
VERSION     DASYRV010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4814
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1719124"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            132..1022
                     /locus_tag="VGQ24_03900"
     CDS             132..1022
                     /locus_tag="VGQ24_03900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD/SigA"
                     /protein_id="HEV8454007.1"
                     /translation="MAGTKKSRRRSARPAALARAADEGRESLDFYLKDISRIPLLTVA
                     EETALARRAFRGEVEAQEKLARHNVRFVVSVAKKFQNRGVPLMDLIGEGNVGLMTAAR
                     KFDPDRGVKFISYAVWWIRQAIQAAIARHGRPVRLPLNRTADLTRLGRTTTFLTEKLG
                     RVPTTEELVKATGLTPEAVRSLGALHVEALRLDHPVREGEDRGRLERFVPLTQEGTDA
                     STLASSRTSDLEAALAALPPRDAKVLRLYFGLDDGNAKTLEEIGRMMGVTRERIRQLR
                     DRALRQLKEEHGDKLRELAA"
     gene            1199..1648
                     /locus_tag="VGQ24_03905"
     CDS             1199..1648
                     /locus_tag="VGQ24_03905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454008.1"
                     /translation="MKHHSSAQRALRAQLAEHFEFFLTVAGVLLAIMITLSELSRGNQ
                     EMALIFLIWLQGFITWAVHRHCWFRRRALVVKMRAMLQDRVNSHLTVMLGVAHFRARD
                     LTENEAGELETALAAARAVSLELESLSIETVRAWERRYPASVRLSWR"
     gene            complement(1666..2829)
                     /locus_tag="VGQ24_03910"
     CDS             complement(1666..2829)
                     /locus_tag="VGQ24_03910"
                     /inference="COORDINATES: protein motif:HMM:NF014342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHHA1 domain-containing protein"
                     /protein_id="HEV8454009.1"
                     /translation="MTHRLYYTDSYLKDFDASVVERADDGRRIYLDRTAFYPTSGGQP
                     FDTGRLGGIEVTDVVDEGERIAHLLTGPLPKGPAVGQVDWPRRFDHMQQHTGQHLLSA
                     VLADLFGYQTIGVHFGQEASTLDLDTGKLTHDQVDRAEERANEIVVENRPVDVSFEEA
                     ASATGLRRPPDRGGTLRVITIRDIDRSACGGTHVRATGEIGLISTRKVERVRKAMRLE
                     FLCGGRAVRRARADHVLLNRLAAEFSSNAEDLPRLIESQREELKEAQSARREMEASLD
                     LCRARELYEAATPDPTGIRRALVRDSGEPLERLRGLAQAFASLPMAIFIGGVTTPPAV
                     VLAASPDTRVDAAGVLKGLLAAVGGRGGGSAALAQGILPGRPQLETIIASLNG"
     gene            2909..3361
                     /gene="msrB"
                     /locus_tag="VGQ24_03915"
     CDS             2909..3361
                     /gene="msrB"
                     /locus_tag="VGQ24_03915"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEV8454010.1"
                     /translation="MGDQKKDATARAEKLTPLQYKVTQQDGTEPPFQNEYWDNKRPGI
                     YVDVVSGEPLFSSLDKFDSGTGWPSFTQPLDPANLVEKSDRSLFTERTEVRSKEADSH
                     LGHVFDDGPAPTGLRYCMNSAALRFIPVEHLEQEGYGKYLPLFQSARK"
     gene            complement(3371..3889)
                     /locus_tag="VGQ24_03920"
     CDS             complement(3371..3889)
                     /locus_tag="VGQ24_03920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454011.1"
                     /translation="MQRIATLWGLAALTMLGASFNTGTMSLRSDSSRAELAKLGQEYG
                     DLQQWVAAIAATSDTLPNESGERARVLADQLARLMRPLENDFERTTASLSTTQLELIL
                     PLWERMAFAHAGLVLLQEQAAELGGDPALEPAELRDLADELSAVLDFAAEVQQMVLEQ
                     LTTPIPTPIRLS"
     gene            complement(4098..>4814)
                     /locus_tag="VGQ24_03925"
     CDS             complement(4098..>4814)
                     /locus_tag="VGQ24_03925"
                     /inference="COORDINATES: protein motif:HMM:NF027219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative zinc-binding metallopeptidase"
                     /protein_id="HEV8454012.1"
                     /translation="VQYPMKYCPWCSRRQFWNEERFFEGECPHCSRGVDDLMNACPWC
                     GGDSTGRDLIPRALTRVRRLLLVSRIKDWGYRILLRPGVSGVDPKYPRMVEIEQRYVV
                     GKRRRDEIPWTMLVGLITHELGHSFLYHHWDWTRTRQFRRAFGEVDKAYRGMDNTWVY
                     FQRRRIAIAPTNFVSAYAAKHPQEDFAETFRFYVTRRGRLRDLFGEFGRKRKGVTLYE
                     KFLVLHDYVRALRGWGNGLS"
BASE COUNT          885 a         1526 c         1544 g          859 t
ORIGIN      
        1 cccagggctc gtcttaagca gtatctatgc gggaacatag ctggggaacc gacccggtgc
       61 ctcgagtgtt aactctccag cgaaactggc tttatagccg ccctgacggg caataatagg
      121 ggagtacgaa agtggcaggt accaagaagt cgcgtcgacg ttcggctcgc cctgcggccc
      181 tggcccgggc cgcggatgaa gggcgtgaga gccttgactt ctatctcaag gacatcagcc
      241 gcatccccct gctgacggtg gcggaggaga cggccctggc gcggcgtgcc ttccggggcg
      301 aggtcgaggc ccaggaaaag ctggcccgcc ataacgttcg gttcgtcgtc tccgtggcca
      361 agaagttcca gaaccggggg gtccccctga tggacctgat cggggaaggg aacgtcggcc
      421 tgatgacggc ggcccggaag ttcgacccgg accggggggt caagttcatc tcctacgcgg
      481 tctggtggat ccgccaggcc atccaggctg cgatcgcccg gcatggtcgg ccggtgcggc
      541 tgccgcttaa ccgaacggcg gacctgaccc gcctgggccg gaccacgaca ttcctcacgg
      601 agaagctggg acgggtgccc acgaccgagg agctggtcaa ggcgacgggc ctcaccccgg
      661 aggcggtacg gtcgctcggc gccttgcatg tcgaggctct tcgactcgac caccccgtgc
      721 gggaaggcga ggaccggggc cggctggagc ggttcgtgcc gttgacgcag gaaggcaccg
      781 acgcctccac tctggccagt agccggacga gcgacctgga ggctgcgctg gccgccctac
      841 cgccccgaga tgcgaaggtg ctccggctct acttcgggct ggacgatggc aatgccaaga
      901 ccctcgagga gatcggccgc atgatggggg tcacccggga gcggatccgc cagcttcggg
      961 atcgcgcact tcgccagctg aaagaagagc acggggacaa gctccgagag ctcgcggcgt
     1021 agaccaggtt ggctaagatg gaaaaagccc cgccttttgg cggggctttt tgccacctgg
     1081 agccggcttg cctctggaca gggaagcgat aaggccgaat actatggact ggacttcgcg
     1141 tccagccccc catcacggcc atcggcctca tcaagtacct cgctccctga ggaccccagt
     1201 gaagcaccac tcctccgcgc agcgcgcgct ccgggctcag ctggccgagc acttcgagtt
     1261 ctttctcaca gtcgcagggg tgctgctggc gatcatgatt acactcagcg agctctcccg
     1321 gggcaatcag gagatggcgc tcatcttcct catctggctt caagggttca tcacctgggc
     1381 cgtccaccga cactgctggt tccgccgccg ggcactcgtt gtaaagatgc gggccatgct
     1441 gcaggaccga gtcaatagcc acctgactgt catgttgggc gtagctcatt tcagggctcg
     1501 cgatctgacg gaaaatgaag caggcgagct ggagaccgcg ctggcggctg ctcgagctgt
     1561 ctcgctcgag ctggagagtc tttccatcga gacggttcgc gcctgggaac gacgctaccc
     1621 tgcatcagtg cgcctttcgt ggcgctgatt tagccacagg tcgtcctagc catttaggga
     1681 cgcgataatg gtctccaact gggggcgacc cggcagtatg ccctgcgcca gcgccgctga
     1741 gccaccaccc cgtccaccta ccgcagccaa cagtcccttc agtactccgg ccgcatcaac
     1801 gcgggtatcg ggcgaggcgg cgagcacgac agccggcggg gttgtcacgc ctccgatgaa
     1861 gatcgccatc ggtagggaag cgaacgcctg ggccaggcct cgcaaacgtt ccagcggctc
     1921 acccgagtcg cgcacgagcg cgcgccggat ccccgtgggg tccggcgttg ccgcttcata
     1981 cagctcgcgt gcccggcaga gatcgaggct ggcttccatc tcccgccggg cggattgggc
     2041 ttccttcagc tcctccctct gagattcgat cagccggggc aggtcctcgg cgttcgaaga
     2101 gaactcggcg gcaagtcgat tcaggagcac atggtcggcc cgggcccggc ggacggcgcg
     2161 cccaccgcag agaaactcga gccgcatcgc cttgcgcacc cgttcgacct tccgggtgga
     2221 gatgagcccg atctcgccgg tggctcgaac gtgagtcccg ccgcaagcgc tgcggtcgat
     2281 gtctcggatg gtgatcaccc ggagggtacc gccccgatcc ggtggccttc ggagcccggt
     2341 agccgatgct gcttcctcga agctcacgtc caccggccga ttttcgacca cgatctcgtt
     2401 ggcccgctcc tccgcccggt ccacttggtc gtgggtgagc ttgccggtgt ccaggtccaa
     2461 tgttgaggct tcctgcccaa agtgaacccc gatggtctgg taaccgaaca agtcggccag
     2521 aaccgctgac agaagatgtt ggccggtatg ttgttgcatg tgatcaaacc ggcggggcca
     2581 atccacttga ccgacggctg gacctttcgg cagagggccg gtcaggagat gggcgatacg
     2641 ctcgccttcg tccaccacgt cggtgacctc gatcccgccg agccggccgg tatcgaacgg
     2701 ctgcccgccg gacgtgggat agaaggctgt tcgatcgagg tagatgcggc gcccgtcgtc
     2761 cgctcgctcg acgacggagg cgtcgaagtc cttcaggtac gagtcggtat aatagagccg
     2821 atgggtcatg gggaacccgg ggcctcacaa gggggttagc cgtaatctag atgtatcccg
     2881 acaaccgcta gtgtaaggag gtagcgcagt gggggatcag aagaaggacg caaccgcacg
     2941 tgccgagaag ctcacgccgc tgcagtacaa ggtcacccag caggacggca ccgagccgcc
     3001 gtttcagaac gagtactggg acaacaagcg ccccggcatt tatgtggatg tggtatcggg
     3061 agagccgctg ttcagctcgc tcgacaagtt cgactccggg acgggatggc ccagcttcac
     3121 ccaacctctg gatccggcca acctggtcga aaagtcggat cggtccctct tcaccgagcg
     3181 gaccgaggtg cggtcgaagg aggccgattc ccatctcggg catgtcttcg acgacggccc
     3241 ggcgccgacc ggactgcgct actgcatgaa ctccgcggca ctccggttca ttccggtcga
     3301 gcatctggag caggaaggct acggcaagta tctgccgctg ttccaatcgg cgagaaagta
     3361 gccgttaggc tcaactcagg cggattgggg tggggatagg tgtggtgagc tgttccagca
     3421 ccatctgctg aacttcggct gcaaaatcca gcaccgccga gagctcgtcg gctaggtcac
     3481 gaagctccgc gggctcgagc gcagggtccc cgcccagctc ggctgcctgc tcctggagca
     3541 ggaccagacc ggcgtgggcg aacgccattc gttcccatag agggaggatc aactcgagct
     3601 gcgtagttga aagcgaggcc gtggtcctct cgaagtcgtt ttccagtggc cgcatcaacc
     3661 tggccagctg atcggcgagc actcgcgccc gctcgccact ttcgttgggg agggtgtccg
     3721 aggtggcggc tatggccgcc acccactgct gcagatcgcc gtattcctgc cccagtttgg
     3781 ccagctccgc ccggctcgag tcgcttcgga gggacatggt tccggtgttg aagctggcgc
     3841 cgagcatcgt caacgccgcc aatccccaca gagttgctat gcgctgcacg tgtcctcccc
     3901 ggcgaatccg gcgcattccg gcgggagccg gggcgaggga ttccgttcca acaaaaactg
     3961 cggtgcgcca gaaaccttgt ctgtgacgcc cgctacctac ggagcccggt ctactcgtct
     4021 gcctaagaac gaggttgcgg gcactgcgtt ttatcgttgg gatcgtttgg agagggtact
     4081 tctgaaaaat gcacctgtca agacaaaccg tttccccacc ctcgcagtgc gcgaacgtag
     4141 tcgtgcagca ccaggaactt ctcgtagaga gtcacgcctt tgcgcttacg accgaactct
     4201 ccaaacaagt ctcgcaggcg gccacggcgg gtcacgtaaa aacggaaggt ctcggcaaaa
     4261 tcctcctgcg gatgtttggc ggcatatgcg ctcacgaaat tggtcggtgc aatggcgatc
     4321 cgccggcgct ggaagtacac ccaggtgttg tccatgccgc ggtaggcctt gtcgacctcc
     4381 ccgaaggctc tccggaactg cctggttcgg gtccaatccc agtgatgata caggaagctg
     4441 tgaccgagct cgtgagtgat gaggccgacc agcatggtcc aggggatctc gtctcggcgg
     4501 cgcttaccca cgacatagcg ctgctcgatc tcgaccattc tggggtactt cggatccacg
     4561 ccggaaaccc ccgggcggag gagaatccgg taaccccagt ccttgatcct cgataccaga
     4621 aggagacggc gcacacgagt cagcgccctg ggtatcaggt cgcggccggt ggagtcgccg
     4681 ccgcaccagg gacaggcatt catgaggtcg tccacaccgc ggctgcagtg aggacattcc
     4741 ccctcgaaga acctctcctc attccagaac tgccgccggc tgcaccaggg gcagtacttc
     4801 attgggtact gcac
//
LOCUS       DASYRV010000154         3553 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_57267, whole genome shotgun sequence.
ACCESSION   DASYRV010000154 DASYRV010000000
VERSION     DASYRV010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3553
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57267"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..268
                     /locus_tag="VGQ24_03930"
     CDS             <1..268
                     /locus_tag="VGQ24_03930"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEV8454013.1"
                     /translation="IGQSGGVDLAILPIGAYDPWIGNHANPEQAWTMAGHLGARQVLP
                     VHHSTFRLSREPREEPLKRLLAATGDQRDRVVGRGIGETITIED"
     gene            complement(322..2145)
                     /gene="glmS"
                     /locus_tag="VGQ24_03935"
     CDS             complement(322..2145)
                     /gene="glmS"
                     /locus_tag="VGQ24_03935"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEV8454014.1"
                     /translation="MCGIVGYVGPRQAAGLLLEGLRRMEYRGYDSAGLAIVNGGLKIV
                     KCAGKLSALEQQLNGTTPAGTLGIGHTRWATHGAPTTVNAHPHTDQSGKIAVIHNGII
                     ENSRAIRKALEQRGHTFKSETDTEVLAHLIGELYNGNLEEAVAAALRDVDGAYGIAVI
                     SSDEPDVIVAARNGSPLLVGVGEDERFVASDASALLAHTRSVVYLDDGEMVVLTRTGY
                     HVRDLAATRIEKPVNQIEWDLATIERGGYSHFMLKEIFEQAESVENTLRGHLLEDEGT
                     SRVSGLNLTDEDIAQIDRIIITACGTSWHSALIGEYMMEELARIPVEVEYASEFRYRN
                     PVVDERTLVIGISQSGETADTLAAIREAKRRGARTIGVVNVVGSTIAREVDGGIYLHA
                     GPEVGVASTKAFTSQVAALALITLRFARLRNLSILQGRQFIEHLHALPELVRQTLETA
                     PEVEALAERFWKSNNALYLGRGVNFPVALEGALKLKEISYIHAEGYPAAEMKHGPIAL
                     IDDNMPVVFIAPNDAVHSKIVSNVEEVKARGGQVIAIINEGDTEIQRLADATITIPVT
                     TDLLTPILTSIPLQLFSYYVAVRRGCNVDQPRNLAKSVTVE"
     gene            complement(2156..3526)
                     /gene="glmM"
                     /locus_tag="VGQ24_03940"
     CDS             complement(2156..3526)
                     /gene="glmM"
                     /locus_tag="VGQ24_03940"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR03990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEV8454015.1"
                     /translation="MSDTLMISVSGMRGIVGKDLTPELVARHAAALGAWARGRGKPVV
                     VLGRDARTSGPMFAQAARAGLMSVGCEVIDVGVAPTPTVQLAVEYHHAGAGLILTASH
                     NPIEWNALKFVGPDGIFLDGDSGAAVRALAADGPPRAGWESVGGIREDPEAITRHLDA
                     VLELPEVDVAAIRARNFHVALDCVRGAGGTTIPRLLERLNCRVSGINLETDGRFPRAP
                     EPLPENLGDLSKLVRESGAEIGFAVDPDVDRLAVVDEKGEPIGEDYTLAFAVRAVLDG
                     GVTKRHGDTRIVVANLSTSLVVEDAVRELGGRFLRAPVGEANVARTIVESGAVIGGEG
                     NGGVILPRLHVGRDAPVGVALILHLMARSGRPVSALVAAQPRYKIVKAKGPRGKDLTP
                     VYRALRQRFPEAQADDRDGLRLAWPDRWVHLRPSGTEPIVRFIAEAPTRDAADQLITA
                     CQELLN"
BASE COUNT          622 a         1175 c         1117 g          639 t
ORIGIN      
        1 aatcgggcaa tcaggcgggg tggacctcgc gatcctgccg atcggcgcgt acgacccctg
       61 gatcggcaat cacgccaacc cggagcaggc gtggaccatg gccggccacc tgggggcgcg
      121 ccaggtattg ccggtgcatc actcgacgtt tcgattgagc cgggagccga gagaagagcc
      181 gctcaaacgg ctacttgccg ccacaggaga tcagcgggat cgtgttgtgg ggaggggaat
      241 tggagagacg ataactattg aggattgaag attgaaaaac ctcggctgtt caattctcaa
      301 tcctcaatct taaatgttca attattcgac tgttactgac ttggccaggt ttcttggctg
      361 gtccacgtta caccctcgcc gtaccgccac gtagtacgag aacagctgca gcgggatgct
      421 ggtgagaatc ggcgtcagca gatcggtcgt taccgggatg gtgatcgtgg catcggccag
      481 ccgctgaatc tcggtgtccc cttcattgat gatcgcgatc acctggccac cgcgcgcttt
      541 tacctcttcc acgttcgaca cgatcttgct gtgcaccgcg tcgttcggcg cgatgaagac
      601 gaccggcatg ttgtcgtcga tcagcgcaat cggtccatgc ttcatctccg cggcagggta
      661 accctcggcg tggatgtagg agatttcttt cagcttgagt gcaccttcca acgctaccgg
      721 gaaattcacg ccccgaccca gatacagcgc gttgttggat ttccagaagc gctcggcgag
      781 cgcctcgact tcgggcgcgg tctccagcgt ctggcggacc agctcgggca aggcgtgcaa
      841 gtgctcgatg aactggcggc cctgcaggat gctcaggttg cggagccggg caaagcggag
      901 ggtgatcagc gcgagcgcgg ccacctggct ggtgaacgcc ttggtgctgg caacgccaac
      961 ctcggggccg gcatgcaggt agataccgcc gtcgacctcg cgcgcgatgg tggagcccac
     1021 cacgttcacc accccgatgg tgcgggcgcc gcgccgcttg gcttcccgga tcgccgccag
     1081 ggtatcggcc gtttcaccgg actgggagat gccgatcacc agggtccgct cgtccaccac
     1141 cggattgcga tagcggaact cggaggcgta ttccacttcg accgggatcc gggctagctc
     1201 ctccatcatg tactcgccga tcaaggccga gtgccacgag gtgccgcagg cggtgatgat
     1261 gatccggtcg atctgcgcga tgtcttcgtc tgtgagattg aggccgctga cccgcgacgt
     1321 gccttcgtcc tcgagcaggt gtccgcgcag cgtattctcc acgctctcgg cctgctcgaa
     1381 gatttccttg agcatgaagt gggagtagcc gccccgctcg atggtggcca ggtcccactc
     1441 gatctggttg accggctttt cgatccgggt cgcggccaga tcgcgcacgt ggtagccggt
     1501 gcgggtcaac acgaccatct cgccatcgtc caggtacacc acggagcggg tgtgagcgag
     1561 cagggccgac gcgtcggagg cgacgaaacg ctcgtcctcg ccgacgccga ccaggagcgg
     1621 cgatccgttg cgcgccgcga cgatgacgtc gggctcgtcg gaggagatca ccgcgatccc
     1681 gtaggcacca tccacgtcac ggagcgccgc cgccaccgct tcctcaagat tgccgttgta
     1741 gagctcaccg atcaggtggg ccagcacttc ggtgtcggtt tccgatttga aggtatggcc
     1801 ccgctgctcc agcgcttttc tgatggcgcg ggagttctcg atgatgccgt tgtggatgac
     1861 cgcgattttc ccggattggt cggtgtgagg gtgggcgttg accgtcgtcg gagccccgtg
     1921 cgtagcccag cgggtgtgtc cgatgcccag ggtgccggcg ggcgtggtgc cgttcagctg
     1981 ctgctccagc gcggagagct tgcccgcgca cttgacgatc ttgagacccc cattgacgat
     2041 ggcgagaccg gcggagtcat agccccggta ctccatgcgc cggagtcctt cgagcaagag
     2101 acccgcagcc tggcggggtc caacgtagcc gacaatacca cacattgcat cggtcctagt
     2161 tgaggagttc ctggcaggct gtaatcaact gatcggccgc atctcgcgtg ggtgcttcgg
     2221 cgatgaaccg cacgatcggc tcggtaccgg acggtcgcag gtgaacccag cgatcgggcc
     2281 aggccagccg cagcccgtcg cgatcatcgg cctgggcctc ggggaaccgc tgtcgcagcg
     2341 cccggtatac aggtgttaag tccttccctc gaggaccctt ggccttcacg atcttatagc
     2401 gaggctgagc ggccacaagc gccgaaacag gacggccaga ccgggccata agatgcaaga
     2461 tcagcgccac cccaacaggg gcgtctcggc ccacatgaag ccggggaaga atgacgccgc
     2521 cattgccttc ccccccgatc accgcgccgg actccacgat ggtccgcgcc acgtttgcct
     2581 ctcccaccgg tgcccggaga aagcggccgc ccagctcgcg gaccgcatct tcaacaacca
     2641 ggctggtgga aaggttcgcc accacgatac gcgtgtcgcc atgacgtttc gtcacgccgc
     2701 catccagcac cgcacgcacc gcaaacgcga gcgtgtaatc ctctccgatc ggctcgccct
     2761 tctcgtccac cacggctaac cgatccacgt ccgggtccac ggcgaacccg atctccgcgc
     2821 cgctctcgcg aaccagcttg ctcaagtcac cgaggttttc ggggagcggc tccggtgcgc
     2881 gagggaagcg cccatcggtt tccaggttga tcccgctgac ccggcagttg agccgctcga
     2941 gcagccgggg tatggtggtc ccgccggctc cgcgcacaca gtcgagggcg acatgaaagt
     3001 tccgggctcg aatggcggcg acatcgacct ccggcaactc gagtacggca tcgagatgcc
     3061 gggtgattgc ttcggggtcc tcccggatcc cgcccaccga ctcccagccc gctcggggcg
     3121 gaccatcggc ggccagagcg cgtaccgccg ccccggagtc gccatccaga aagattccgt
     3181 ccggccccac gaacttgagg gcgttccact cgatcgggtt gtggctggcg gtgaggatca
     3241 gtcccgcgcc ggcatggtgg tactcaacgg ccagctgcac cgtaggtgtg ggcgccaccc
     3301 cgacgtcgat gacctcacac cccacagaca tcagcccggc ccgcgcggcc tgcgcaaaca
     3361 tcggcccgct ggttctcgcg tcccgcccta gcacgaccac cggtttgccc cgccctcggg
     3421 cccacgctcc cagcgcggcc gcgtgacggg ccaccagctc aggggtcaga tccttgccca
     3481 cgatcccccg catccccgag acgctgatca tcagagtgtc tgacatagcc accaaaatag
     3541 cggactaagg act
//
LOCUS       DASYRV010000155         2577 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1719269, whole genome shotgun sequence.
ACCESSION   DASYRV010000155 DASYRV010000000
VERSION     DASYRV010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2577
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1719269"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1052)
                     /locus_tag="VGQ24_03945"
     CDS             complement(<1..1052)
                     /locus_tag="VGQ24_03945"
                     /inference="COORDINATES: protein motif:HMM:TIGR00200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family nicotinamide mononucleotide
                     deamidase-related protein"
                     /protein_id="HEV8454016.1"
                     /translation="MNIELVTIGTELLLGLTVDTNGAEIARRLAVQGVGVTRRVSVSD
                     RADEIRAAVSEALQRTGAVLTTGGLGPTRDDITKKVVADLFHAPLQFDEEVWAALLER
                     FARLERTPAASNRSQAEVPRGATVLRNRWGTAPGLWLEGAPGLAIMLPGVPHEMRRLL
                     EDEVVPRLATRASGLVIRSLVVRTSGMPESALAERLGEIEQDIAPLSLAYLPGLEGVD
                     LRLSAWNLEPGDADRRLRSAADLLHARAGEWVYGEGESDLAALVLDRSRSQGIRLAVA
                     ESCTGGLLGARLTEIPGSSEVFVGGVIAYDNAPKTGLLGVAPALLAEHGAVSEPVARA
                     MAQGAAERFGVGAALSV"
     gene            complement(1117..1773)
                     /gene="pgsA"
                     /locus_tag="VGQ24_03950"
     CDS             complement(1117..1773)
                     /gene="pgsA"
                     /locus_tag="VGQ24_03950"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEV8454017.1"
                     /translation="MWTLPNIITLVRICFTPVIALLPFIEGYWPKLIAFIIFIIAAVS
                     DVFDGHLARSRNEVTDLGKLLDPIADKLLLFATLIPIYWISRQRHDLYDIPVWGSIPL
                     WVCLLLIGRELAMTGFRWWASRRGVVIPAAGAGKLKTTIQNIFVGAVILWFAFRDARK
                     PMGWEHNQYAQYWNQFHGGFVAVTLACAALLTVYSFAVYLYRNRRLFSDRAGRLGAGS
                     "
     gene            complement(1781..2455)
                     /locus_tag="VGQ24_03955"
     CDS             complement(1781..2455)
                     /locus_tag="VGQ24_03955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase domain-containing protein"
                     /protein_id="HEV8454018.1"
                     /translation="MSMINYASREINCKLVYYGPGLGGKTTNLEHVYNKVAPASRGKM
                     ISLATETERTLFFDFLPVDLGTIRGFKVKFHLYTVPGQVYYNASRKLILKGVDGVVFV
                     ADSQIERMDANIEAMQNLYENMTQHGYDVTKLPFAIQYNKRDLPNAAPIAELQAALNP
                     GWPVSDPAKQRVTPDPYHDSEFLVNQEDGHWIERAPYFEAVALTGEGVFDTLKAISKN
                     VVKTLG"
BASE COUNT          481 a          834 c          814 g          448 t
ORIGIN      
        1 accgatagtg ccgcaccgac gccaaaccgc tcggcggcgc cttgggccat ggctcgggcc
       61 accggctcac tgaccgctcc gtgctcggcc agcagggcag gagccacccc gagcagcccc
      121 gtcttgggcg cattgtcgta ggcgatcacc ccgcccacga agacctccga gctgcccgga
      181 atctccgtga gccgggcgcc gagcagccca ccagtacagg actccgccac cgccaggcgg
      241 attccttgcg accgtgatcg atccagcacc agtgccgcca ggtcgctctc accctctccg
      301 tagacccatt cgccggcgcg agcgtgcagg aggtcggcgg cgctccggag ccgccggtcc
      361 gcgtcgccag gctcgaggtt ccaggcactc agccggaggt cgacgccttc cagccccggt
      421 aaatacgcca gactcagcgg ggcgatgtct tgctcgattt cgcccagtcg ctcggccaag
      481 gcggactccg gcatgccgct ggtgcgaacg acaagcgagc gaatcaccag gccgcttgcc
      541 cgcgttgcca gacgtggcac tacctcgtcc tcgagcaacc ttcgcatctc atgcggaacg
      601 ccgggcaaca tgatcgcgag cccgggcgcg ccctccagcc acaagcctgg tgcggtgccc
      661 caccggttcc gcagcacagt agcccctcga ggcacttctg cctggctccg gttactcgcg
      721 gcgggcgttc tctccaggcg ggcaaagcgc tcgagcaggg cagcccagac ttcctcatcg
      781 aactggagcg gagcgtggaa aaggtcggct accacctttt tggtgatatc atcgcgggtg
      841 ggcccgagcc ctccggttgt cagcacagcg ccggtccgct gcaaggcttc ggacacggcg
      901 gcgcggatct catcagcccg atcggagacc gagactcgac gagtcacgcc gacgccctgc
      961 acagccagcc tccgcgcgat ctcggcgccg ttggtatcga cagtgaggcc gaggagcaac
     1021 tcggtgccga tggtgacgag ctcgatgttc atgagagctg ggagctagga gctgggagct
     1081 gggaggtaga agcgaaggcc tgagaagtga taactcctag ctcccagctc ctagcctccc
     1141 agctctatcc gagaacaacc ggcgattgcg gtacaggtag accgcgaagg agtacaccgt
     1201 gagcaacgcc gcgcaggcga gggtgaccgc gacaaagccc ccgtggaact ggttccagta
     1261 ctgcgcatac tgattatgct cccagcccat tggcttccgg gcgtcgcgga aggcgaacca
     1321 cagaatcacg gcgccgacga agatgttctg aatcgtggtc ttcagcttcc ctgccccggc
     1381 ggccgggatc accaccccgc gccggctggc ccaccagcga aagccggtca tcgcgagctc
     1441 ccggccgatc agcagcaggc agacccacaa gggaatgcta ccccagacgg ggatgtcgta
     1501 gagatcgtgc cgctggcggg agatccagta gatcgggatc aacgtcgcga agagcaggag
     1561 cttgtcggcg atgggatcga ggagcttgcc caaatcggtg acttcgttcc ggctgcgggc
     1621 gaggtggccg tcgaagacgt cgctgacggc ggcgatgatg aagatgatga aggcgatcag
     1681 cttgggccag tacccttcga tgaacggcag cagcgcgatc accggggtaa agcagatccg
     1741 caccagcgtg atgatattgg gaagcgtcca cataagtgtc ctaccccagc gtcttgacga
     1801 cgttcttgct gatggccttc agcgtgtcga agacgccttc accggtgagc gccaccgctt
     1861 cgaagtacgg agcccgctcg atccagtgcc cgtcttcctg gttgacgaga aactccgagt
     1921 cgtggtacgg atccggagtc acccgctgct tggcagggtc ggacaccggc cagccggggt
     1981 tgagcgccgc ctggagctcg gcgatcggcg ccgcgttggg caggtcgcgc ttgttgtact
     2041 ggatcgcgaa cgggagcttg gtgacatcgt agccgtgctg cgtcatgttc tcgtacaggt
     2101 tctgcatcgc ctcgatgttc gcgtccatgc gctcgatctg gctgtccgcc acgaacacga
     2161 cgccatcaac acccttgaga atcagctttc gcgaggcgtt gtagtacacc tggccgggaa
     2221 cggtgtaaag atggaacttg accttgaacc cacggatggt cccgagatct accggaagga
     2281 aatcaaagaa gagcgtacgc tccgtctcgg tggccaggga gatcatcttt ccgcgtgagg
     2341 caggggctac cttgttgtac acgtgctcga ggttggtcgt tttcccgccc aggccgggcc
     2401 cataatacac cagcttgcag ttgatctcgc gcgaggcgta gttgatcatc gacatgggtg
     2461 cgtttcctca ggccccgaaa agtttgtcga tctcgtcttc cgcctcgccg agaaactggg
     2521 attccactcc cggcgcactc gtgccatcgc gattgaacat gtcggtgaac acctgcg
//
LOCUS       DASYRV010000156         4071 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2937878, whole genome shotgun sequence.
ACCESSION   DASYRV010000156 DASYRV010000000
VERSION     DASYRV010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4071
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2937878"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..3584
                     /locus_tag="VGQ24_03960"
     CDS             <1..3584
                     /locus_tag="VGQ24_03960"
                     /inference="COORDINATES: protein motif:HMM:NF024487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3320 domain-containing protein"
                     /protein_id="HEV8454019.1"
                     /translation="MQNLAASLDASLQRPAVPEMSAQRLAAVRDELTQYVKAVHTPFG
                     ALALAPYRAYGELARVLDAPKVPWARPVEAITRDQLEQSEHQLKDFVEAGRAIGDPSK
                     HPWRDTKRTFYSESDLDSVRRLLLLLRTRIAECQSLATQVQAAFGFRPIQSAVDVGRA
                     CEVARVLARSPGAPAAVLSSEEWDTPRSDAVALIALGRTFVELRDEVFKHFSHAVLVS
                     DHASDIEFMEDKLRRRFSMTAWMDGRFRAIRKRWRACRLPGYQPKLLDQAKDMRVAQQ
                     LRGVRSDLGARGGMARAMFGPLWRGEESDWAELDRYIEWVVEFRRAFREHGLGRRAIE
                     VASSRAPDVSSIEALRAASEGVLGVLAELRGLVEWPADYLDGGTFSDVDQRASAMSDS
                     TSLAPRWATFEMARSKAAGGVAGEVLSVAMSGEVASTDLPAAFRRAFYQRWLSDVMQG
                     RDSLRSFHTATHENRVAEFRELDEAVLRANQALLVARRRELLQTKLRAAELGPAMGFL
                     RRQMARQRGLSPLRRTMQEADPAIRAIKPCFLMSPLSVAQLLPGSEPTFDLVVFDEAS
                     QLPPEDAVGAIVRGRQLVVVGDPKQLPPTNFFSSMLGQSVAHDEDGTPIYEDGESVLE
                     EFMGAGVPMSRLRWHYRSVHESLITFSNLSFYEADLHTFPSVETDSDLIGLQFVYVPD
                     GIYEGKGLNRAEARRVADAVVEHAKRHPDLTLGVGTFNLRQQIAIQDELESRRRADPD
                     IEAFFSRSVKEPFFVKNLENVQGDERDVIFISVTYAKGPDGRLRYNFGPLNSANGWRR
                     LNVLTTRARRRMRVFASIRGDEIRPTATGSDGPRLLRDFLVYAEHGRLDSPMVSAGAS
                     AESPFERDVYTELSRHGLQLEPQVGASGYRIDFGVRDEAVLGRFICGIECDGAAYHAS
                     ETARDRDRLRQDVLEARGWTILRVWSTDWFKDRQGQVSRLLGLISQARDRVLEEERAE
                     AAARTLAQEEQARATQRAAESASRTVEISGTEPGDERARPVTTEAQPYRLADVVGRYS
                     SEEILDADVSRLVNAAKEIASIEAPLHVTDLTGRIGDMWGVGRVGSRIAAKVMQGIQT
                     AARRGAIELRGEFVWVPGQGCTVRARSGTGISAERISPEEYQEAIVQTLREAGVLPRD
                     ELIAAVRSLLGFSRTGPVLEECIGRAIGVLLTAGRLGEGSGGITFRE"
BASE COUNT          700 a         1159 c         1424 g          788 t
ORIGIN      
        1 tcatgcagaa tcttgcggcc tctctggatg cctcgctcca gcggcctgct gtaccggaga
       61 tgtcggcaca gcgattggca gcagtccgcg atgagctgac tcaatatgtg aaggcggttc
      121 acacgccgtt cggcgccctc gccctggcac cctatcgcgc ctatggcgag cttgcgcgcg
      181 tcctcgatgc acccaaggtg ccgtgggctc gaccggtgga ggcgatcacg cgagatcagc
      241 tcgagcagag cgagcaccag ctgaaggact tcgtcgaggc cggcagggct attggagacc
      301 cgagcaagca cccgtggcgg gatacgaagc ggacgttcta ctcggagtct gatctcgatt
      361 ccgttcgccg gctcttgctt ctgctacgga cccgcatcgc ggaatgtcaa tcacttgcga
      421 cccaggttca ggcggcgttc ggcttccgcc cgattcagtc ggcagtggac gtcgggaggg
      481 catgcgaggt ggcgcgtgtt ctggcgcggt cgccgggcgc gccggcggcg gtgctgtcga
      541 gtgaggagtg ggatacgcct cggagtgacg ccgtggctct cattgcactg ggccgcacgt
      601 ttgtcgaatt aagagatgag gtattcaagc acttctcaca tgctgtcctg gtgtcggacc
      661 acgcaagcga tatcgagttc atggaggaca agctccggcg gcggttcagc atgactgcgt
      721 ggatggacgg ccgtttccgg gcgatacgca agcgatggcg ggcctgccga ttgcccgggt
      781 atcagccgaa gctgctcgac caggccaagg acatgagggt ggcgcagcag cttcgcgggg
      841 tgcgatcaga tctgggagcc agaggtggca tggcgcgggc catgttcggc cccctgtggc
      901 gcggcgagga gtccgactgg gcagaactgg atcggtatat cgagtgggtg gtggagttcc
      961 ggcgggcgtt tcgggagcat ggcttgggcc gtcgggcgat cgaggtggcg tcttcccgag
     1021 ctccggatgt gtcttccatc gaggctctcc gtgcggcatc ggagggtgtc ctgggggtcc
     1081 tggcagagct ccgtggcctt gttgaatggc cggcggacta cttggatggc gggacgttct
     1141 cggatgtcga ccagcgcgcc tcggccatga gcgattcgac cagtctcgcc ccacgctggg
     1201 ccaccttcga gatggcgagg tcgaaggcgg ccggcggggt ggccggcgag gtgctgagcg
     1261 tggcaatgag tggtgaggtc gcctcgaccg atctaccggc cgcgtttcgg cgggccttct
     1321 accagcggtg gttgagcgac gtcatgcagg gcagagactc attgcggtcc ttccatactg
     1381 cgacccatga gaaccgcgtg gccgagttcc gggagctcga tgaggcagtc ctgagagcca
     1441 atcaggcact gctcgtggcc cggcgccgag agctgctcca gaccaagctg agggcggctg
     1501 agctcggccc ggcgatgggc ttcctgcgaa ggcagatggc gcggcagcgg gggctcagtc
     1561 cgttgcgccg gacgatgcag gaggccgacc ccgctattcg ggccatcaag ccctgcttcc
     1621 tcatgagccc gctgtccgtg gcgcaattgc tccctggctc tgagcccaca ttcgatctgg
     1681 tcgtgttcga cgaggcgagc cagctcccgc cagaggatgc ggtgggggcg attgttcgcg
     1741 ggaggcagct cgtggttgtg ggcgatccca agcagttgcc acccaccaac ttcttctcga
     1801 gcatgctggg gcagtcggtc gctcatgacg aggacggaac tcccatctat gaggacggtg
     1861 agagcgtcct tgaggagttc atgggggcag gggtccctat gagtcgactt cgatggcact
     1921 accgcagtgt ccatgagtcg ctcattacct tttcgaacct cagtttctac gaggcggatc
     1981 tgcacacgtt cccgagcgtc gagaccgact cggacttgat tggtctgcag ttcgtctatg
     2041 tgccggacgg catctatgaa ggtaagggac tcaatcgggc ggaggctcgc cgagtcgcag
     2101 atgcggtcgt agagcacgcg aagcgccacc ctgacctgac gttgggggta ggaaccttca
     2161 acctgcgtca acagatagcc attcaggacg agctcgagag tcgacgtcgg gctgatcctg
     2221 atattgaagc tttcttctcc cgatctgtga aggagccctt tttcgtcaag aacctggaga
     2281 acgtacaggg cgacgagcgg gatgtgatct tcatcagcgt gacgtacgcg aaagggccgg
     2341 acggaaggct tcgttacaat tttggtccgc tgaacagtgc gaacgggtgg cgacgactga
     2401 atgtgctcac gaccagagct cgacggcgga tgcgcgtgtt cgcgtcgatc aggggcgatg
     2461 agatcaggcc gacggccact ggctcggacg ggccgaggct tcttcgagac ttccttgtgt
     2521 atgcggagca tggccgcctc gacagcccga tggtgagcgc tggggcaagc gccgagtcgc
     2581 cgttcgagag agacgtttat acggagctaa gccgtcatgg gctccagctt gagccccagg
     2641 tcggcgcgtc gggctatcgg atcgatttcg gggttcggga tgaggcggtg ctagggcgat
     2701 tcatctgcgg tatcgagtgt gacggggcgg cataccacgc ctcggagacg gcccgggatc
     2761 gtgaccggct ccgccaggac gttctcgaag cccgaggttg gacgatcctc cgtgtgtggt
     2821 cgacagactg gttcaaggac cgccagggac aggtgtcccg gctgctaggc ctcatctccc
     2881 aggcacgaga ccgcgtcctg gaggaggaac gggcggaagc ggccgcacgt accctggctc
     2941 aagaggagca agcgcgggcc acgcagcgcg cggccgagtc agcctcccgc actgtcgaga
     3001 tatctgggac ggagccgggc gacgaacggg cgagacccgt gaccaccgaa gcccagccgt
     3061 accgcctggc tgacgtggtg ggtcgatact cgagcgagga gatactcgac gcggatgtct
     3121 ccaggcttgt caatgccgcg aaggagattg cctcgatcga agcaccactc cacgtgacgg
     3181 acctcaccgg ccgtattggc gatatgtggg gtgtcgggcg cgtgggttcc agaattgcgg
     3241 cgaaggtcat gcagggtatt cagaccgcgg ctcggcgggg tgcgatcgag ctgcgcggtg
     3301 agttcgtgtg ggtcccgggg caggggtgca ccgttcgcgc tcgttcgggg actggtatct
     3361 ctgccgagcg tatctcgccc gaagagtacc aggaggccat cgtacaaacc ctccgtgagg
     3421 ccggagtctt accccgagat gagttgatcg cagctgtcag atcgctactg ggattcagcc
     3481 ggactggccc ggtgctggag gagtgtatcg ggcgtgccat cggcgtccta ctgaccgccg
     3541 gcaggctcgg tgagggtagc ggcgggatca cctttcgtga gtgacggtaa agagggccgc
     3601 cgaaccgcga gatagggggt agcgatgggc ttttatgttc ggaaggcctt cggctttgga
     3661 cccttccggc tgaatctttc gaggtcgggt cttggcgtct ctttcggcgt caaaggcgcc
     3721 cggatcggag ttgggcctcg ggggagttac atacatgctg gccgaggagg aatctactac
     3781 cgccagagtc tgaccccagg tgcgccccct ccaagatccc tacctacgcc tgtgcctccg
     3841 tcggagagcc tgtcagaagt agagagtgcc gcggcaagcg agctcatgga cagctcggcc
     3901 gacgcgcttc tcaaggagct aaatcgcgtt caaagccgag tccaagcgct gcccattgct
     3961 cttgtgctaa tcgtgcttgg attgctagct ctgatggcga cctttggatc taacgagtcc
     4021 gtagacccgt tggtgagagt gtctgtcgtt gtcctcgcat gcttcgccgg a
//
LOCUS       DASYRV010000157         3227 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1719315, whole genome shotgun sequence.
ACCESSION   DASYRV010000157 DASYRV010000000
VERSION     DASYRV010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3227
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1719315"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            186..1865
                     /locus_tag="VGQ24_03965"
     CDS             186..1865
                     /locus_tag="VGQ24_03965"
                     /inference="COORDINATES: protein motif:HMM:NF015094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HEV8454020.1"
                     /translation="MDLKPATLRRYGSVARLLFKYARPGNALTAAELPDGLHELADPE
                     ELERVENLAKDLEALGPTFIKLGQLLSSRGALIPSEYAEPLERLQDSVAPFSFEEVER
                     IVTEELGARLSKAFEWFDPSPLASASLGQVHRARLREGREVVVKVQRPHIRQRITEDL
                     EAFDEIARLLEKHTSLGAHLDVRAVLEEFRKTIFAELDYHREAQHLTRLADRLDGFRR
                     IVVPRPVPDYSSARLLTMDYIAGEKITSVSPLTRLEVDVEGLAEELFQAYLQQLLIDG
                     FFHADPHPGNVLLTRDNRIALIDLGMVARFSPRLQDALLQMVLAIADGRGDETADQVL
                     ALAEKADDVNEREFRRRVAGMVSEYAGGGLATLPVGKVFLEIVRASFESGVRLPPETA
                     LLGKTLYNLDGVGRALAPDFDPTESIRRNSARLMRQRMLKSLSPGNLFSGALELRNFA
                     DRLPARLNRILDAAAANQLGVRIDTGIDAPRLLLGFQKVANRITMGLVLAALIVGAAM
                     LMQVNTTFRLFGYPGFAILLFLLAGGSGIVLLLTIATQDRRGIRPRGTRHP"
     gene            1966..2379
                     /locus_tag="VGQ24_03970"
     CDS             1966..2379
                     /locus_tag="VGQ24_03970"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEV8454021.1"
                     /translation="MSLPAITAWGLFPLRIVVGTVFLMHGGQKLFVFGLAGTTAAMTQ
                     MGIPLPAVSAVLVMAVELLGGAAILAGMGTRWAALLLTGDMAVAILAVRLPGGFFAPR
                     GFEFEFTLLGALLTLALLGPGRGPLDGLLRRFSGG"
     gene            2415..>3227
                     /locus_tag="VGQ24_03975"
     CDS             2415..>3227
                     /locus_tag="VGQ24_03975"
                     /inference="COORDINATES: protein motif:HMM:NF027232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase"
                     /protein_id="HEV8454022.1"
                     /translation="MNTESPQEQPFVPKRFSLVLVLFSAAAVPTVAAQSPDLYSAMHW
                     RSIGPVRGGRARALAGVPSQPNVFYIGFDNGGVWRSTDFGSTWEPLFDQQPTGSIGAI
                     AVAPSDPNIIYVGSGAGIIRPDLATGNGVYKSSDAGKTWTHLGLDDTQMIAMIDVDPS
                     NPDRLFVAALGHPYGPNATRGVFRSTDGGKSFEKVLYKDEYTSANDVRIDVHEPNTIY
                     ATLWEQQQSFIEGQGFGNAGMGIFKSTDGGSTWTQLSEGLPQILQANVAIAPS"
BASE COUNT          533 a         1077 c         1040 g          577 t
ORIGIN      
        1 gataccgaat aaaccccgaa atagcaagtc ccgtgttcgt cctggccaac tcccatcggt
       61 ttggcgagaa ggggggacgc agcgtccgta ggttcagcat gggcaagttg tccccacacg
      121 ctccgcagtg tccatagtcc cagtcggata tcgtccctac gggtgtccaa aacgagggag
      181 cgagcgtgga tctcaaaccg gccacactca ggcgctatgg cagcgtggcg cgcctgctct
      241 tcaaatacgc gcggcccggg aacgccctca cggccgcaga actcccggac ggactccacg
      301 agctcgccga cccggaggag ctcgaacggg tcgagaatct ggccaaggac cttgaggcct
      361 tgggccccac ctttatcaag ctgggccaac tgctttccag tcgtggcgcg ctgatcccat
      421 cggagtacgc cgagccgctg gaacggctgc aggactcggt cgcgcccttc tcgttcgagg
      481 aagtcgagcg gatcgtgacc gaagagctgg gcgcgcgtct ctccaaggcg ttcgagtggt
      541 tcgacccgtc gcccctggcg agcgcctcgc tgggccaggt ccatcgggcc cggctgcggg
      601 agggccgcga agtggtggtc aaggtgcaac gcccgcacat tcgccagcgc atcacggagg
      661 acttggaggc cttcgacgag atcgcgcggc tgctggaaaa gcataccagt ctgggcgccc
      721 atctggacgt gcgggcggtg ctcgaagagt tccgcaaaac cattttcgcg gagctcgact
      781 accaccgtga ggcccagcat ctgacccgcc tggcggatcg cctcgacggc tttcggcgga
      841 tcgtagtgcc gcggccggtg ccggactatt ccagcgcgcg gctgctcacc atggattaca
      901 tcgcggggga gaagatcacc agcgtgagtc cgctgacccg gctcgaagtc gatgtggaag
      961 ggctggcgga ggagctcttc caagcctatc tgcagcagct gctcatcgac ggttttttcc
     1021 atgccgaccc ccatcccggc aacgtgctcc tgacccggga caaccgcatc gccctgattg
     1081 acctgggcat ggtggcgcgg ttctccccgc gacttcagga cgccttactc cagatggtgc
     1141 tggcgattgc tgacggacgg ggcgatgaga ccgccgatca ggtgctcgcg ttggcggaaa
     1201 aggcggatga cgtcaacgag cgggaattcc gccgccgggt cgcggggatg gtgagcgagt
     1261 atgccggagg agggctcgcc accctgccgg tggggaaagt ctttctggaa atcgtccgcg
     1321 cgtcgttcga gtccggtgtg cgcctacctc ccgagacggc cctgctcggg aagacgctct
     1381 acaacctcga tggggtcggc cgtgctctcg cgccggactt cgatccgacg gaatcgatcc
     1441 gccgcaactc ggcccggctg atgcgccagc ggatgctcaa gagcctgtct ccgggaaacc
     1501 tgttcagcgg ggccctcgag ctgcggaatt tcgccgaccg gctcccggcg cggctcaacc
     1561 ggattctcga tgccgccgcc gccaaccagc tcggcgtgcg gatcgacacc ggcatcgatg
     1621 ccccgcggct gttgctgggg tttcagaagg tggccaaccg catcacgatg ggactggtcc
     1681 tggcggcgtt gatcgtcgga gcggcgatgc tcatgcaggt caatacgacc ttccggctct
     1741 tcgggtatcc cggctttgcg attctgcttt tcctactggc gggcgggtca ggcattgtgc
     1801 tgctcctgac catcgcgacg caggaccgcc gcggcatcag gccgcgaggg acgagacacc
     1861 cttagttgct gagcctgccg tagcgcacca gaacttgcgc cgggtaagtt gcgacccgtc
     1921 gccgaacgct cctcccgaga cctgagaggc acggtcatga cccgaatgtc gctgccagct
     1981 atcacggcgt ggggcctctt tccgctccgg atcgtcgtgg gcacggtatt cctgatgcac
     2041 ggcggtcaga aactcttcgt gttcggcctc gccggaacca ccgccgccat gacgcaaatg
     2101 ggcattccgt tgcccgcggt cagcgcggtg ttggtgatgg ccgtcgagct gctgggcggc
     2161 gcggccatcc tggctggtat ggggacccgc tgggccgctc tgctgctgac cggcgacatg
     2221 gcggtggcca ttctcgcggt ccggttgccg ggcgggttct tcgcgccgcg cggattcgag
     2281 ttcgaattca ccctgctcgg cgccctgctg acgctggccc tgctggggcc aggccggggc
     2341 cctctcgatg gactgttgcg gagattctcc gggggttgaa tactttctgc cgcagtaccg
     2401 ccacccgagc cagcttgaac actgagtccc cccaggagca gcccttcgtg cccaaacgct
     2461 tcagtctggt cctcgtcctg ttctcggctg ccgccgttcc aaccgtcgca gcgcagtcgc
     2521 ccgacctcta ctccgcgatg cactggcgct ccatcgggcc ggtccgaggg ggtcgcgctc
     2581 gcgccctggc cggcgtgccg agccagccca acgtgttcta tatcggcttc gataacggcg
     2641 gtgtgtggcg gtcgaccgac ttcggctcga cctgggagcc gctcttcgat caacagccca
     2701 ccggttcgat cggggccatc gcggtggccc cgtccgatcc caacatcatt tacgtcggca
     2761 gcggcgcggg catcatccgg cccgatctcg ccaccggcaa cggcgtttac aaatccagcg
     2821 acgccggcaa gacctggact cacctggggc tcgatgacac ccagatgatc gccatgatcg
     2881 atgtcgatcc cagcaacccc gaccggctct tcgtggcggc actcggccac ccgtacgggc
     2941 ccaacgcaac ccgcggggta ttccgctcga ccgacggcgg caaaagcttc gagaaggtgc
     3001 tctacaagga cgagtacacc agcgccaacg acgtccgcat cgatgtccac gagccgaaca
     3061 ccatttatgc caccctctgg gagcagcagc agagcttcat cgagggccag gggtttggca
     3121 atgcggggat ggggatcttc aagtccaccg acggcggctc gacctggacg caactctcgg
     3181 agggcctccc gcagattctt caggcgaacg tcgccatcgc cccgagc
//
LOCUS       DASYRV010000158         2145 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2134784, whole genome shotgun sequence.
ACCESSION   DASYRV010000158 DASYRV010000000
VERSION     DASYRV010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2134784"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..724
                     /locus_tag="VGQ24_03980"
     CDS             <1..724
                     /locus_tag="VGQ24_03980"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEV8454023.1"
                     /translation="THNLGDGHPYKVEGIGGDKIPTTIWFDWIDEFRQVSDRASLVMA
                     RRLAREEGILAGGSTGLNVALALDLAREVDDPSALIVTILCDTGERYLSKVFNDEWMQ
                     ENQMLEVPRTTVEQLLERRPHDSPPLVSVAPTAAVRQALNLMNTWGVSQIPVVEDGRS
                     VGGLVEASLMTRALAQPALLDRPVREIMEPPFPEVEANCPTDRLGAMLTRESPAALVR
                     KDGKLVGIVSRYDVLQQLIGSR"
     gene            727..1740
                     /locus_tag="VGQ24_03985"
     CDS             727..1740
                     /locus_tag="VGQ24_03985"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEV8454024.1"
                     /translation="MRVTVLTGGTSAERDVALASAVQVIAALRSRSHEVSVVDTARGY
                     IPAADEPALLSGVVGTEPPSLEQLRSLEQGLLLSGLANLAVVRDADVLFLALHGGRGE
                     DGTIQTLLEMVGVPYTGSGRLGSAMAMDKDISKRLFRTAGVATADWVMAPAAPDQLGR
                     DFGWPVVVKPSKQGSTVGLTVVKSPGEYDRAVALARQYDDEVMIERFVPGRELTVGVL
                     EGAALAVGEIIPRHEIFDYECKYTPGMSQEIFPAALPAKVTAECQRLSLLAHEALKLG
                     GYSRVDFRLTPAGELFCLEVNTLPGMTATSLLPQAAQADGIAFPELCERICRAAHRGR
                     GQV"
     gene            1740..>2145
                     /locus_tag="VGQ24_03990"
     CDS             1740..>2145
                     /locus_tag="VGQ24_03990"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEV8454025.1"
                     /translation="MKSSPSYRITPWVGRIIIANAVVLLLLMTLFTSRDLFQALQFSP
                     RTALTRPWTFVSYMFVHAGLLHLLANMLMLFVFGTAVESRMGSRNFLLYYLFCGVGAA
                     VFALLLAGIMPVGAFVGASGAVLGVAVAFAMFW"
BASE COUNT          344 a          678 c          715 g          408 t
ORIGIN      
        1 cactcataac ctgggtgacg gccaccccta caaggtagag ggaattgggg gagacaagat
       61 cccgaccacc atctggttcg attggatcga tgagttccgg caggtctccg atcgtgcctc
      121 gctcgtgatg gcgcgccgcc tggcacgaga ggaggggatt ctggccggag gctcgaccgg
      181 tctgaatgtc gccctggcgc tcgacctcgc ccgcgaggtg gacgatccgt cggcgctcat
      241 cgtcaccatt ctctgtgaca ccggggagcg ctacctctcc aaggtgttca acgatgagtg
      301 gatgcaggag aatcagatgc tcgaggtgcc ccggaccacg gtggagcagc tgctggaacg
      361 ccggccccat gattcccctc cgctcgtgag cgtggccccg accgcggcgg tccgccaggc
      421 gctcaacctc atgaacacct ggggggtgag ccagattccc gtggtcgagg atggccgttc
      481 tgttggtggg ctggttgaag cgagtctgat gacgcgggca ctcgcgcaac cggccctgct
      541 cgaccgtccg gtgcgcgaga tcatggagcc tcccttcccc gaggtcgagg ccaactgccc
      601 caccgaccgg ctcggcgcga tgctcacccg ggagagcccg gcggcgctgg ttcgaaagga
      661 cggcaagctg gttggcattg taagccggta cgacgttctc cagcagctta tcgggtccag
      721 gtagaagtgc gggtaaccgt tctgaccggc gggacttcgg ccgaacggga cgtcgccctc
      781 gcctcggccg tgcaggtcat cgcggccctg cgctcccgga gccacgaggt atcggtggtg
      841 gataccgctc ggggctatat ccccgccgcc gacgaaccgg cattactctc cggggtcgtg
      901 gggaccgagc ctccgtcact cgagcagctt cggagcctgg aacaggggct gctgctctcc
      961 ggcctggcca acctggccgt ggtcagggat gccgacgtgc tgttccttgc actccatggc
     1021 gggcgcggag aagatggcac cattcagaca ttactcgaga tggtgggtgt tccgtacacc
     1081 ggcagcggcc ggctcggcag cgccatggca atggacaagg acatctccaa gcgcctgttc
     1141 cgtacggccg gtgtcgcaac cgccgattgg gtgatggcgc ccgcagcacc cgaccagctt
     1201 gggcgcgact ttggatggcc ggtggtggtg aagccgtcca agcagggctc gacagtgggc
     1261 ctgaccgtgg tgaagagccc cggcgaatac gaccgggcgg tggcgctggc gaggcagtac
     1321 gacgatgagg tgatgatcga acggttcgtg cccggacggg aattgaccgt gggggtgctc
     1381 gaaggggcgg cgctcgcggt cggcgagatc atcccgcggc acgagatttt cgactacgag
     1441 tgcaagtaca cccccggtat gtcgcaggag atcttcccgg cagccctacc ggcaaaggtg
     1501 acggctgaat gccagcgact cagcctgctg gcacacgagg cgctgaagct gggggggtac
     1561 tcccgagtgg attttcgctt gacaccggct ggggaactct tctgtttaga ggtaaacacg
     1621 ttgccgggca tgacggccac gagcctcctg cctcaggctg cccaggcaga cggcatcgcg
     1681 tttcccgaac tgtgcgaacg gatctgccga gccgcccatc gcggccgagg ccaagtctga
     1741 tgaaatcgtc tccatcgtat cgcattaccc cctgggtcgg ccgcatcatc atcgccaatg
     1801 cggtggtgct gctcctgctc atgacgctgt tcacttcccg cgatctcttc caggcgctgc
     1861 aattctcccc ccggactgcc ctgacccgcc cgtggacctt cgtgagctac atgttcgttc
     1921 acgctggctt gctgcacctg ctcgccaata tgctgatgct cttcgtgttc ggcaccgcgg
     1981 tggagagccg catgggaagt cgcaacttcc tgttgtacta cctcttctgt ggagtcggcg
     2041 cggcagtctt tgctctgctg ctggccggca tcatgccggt gggcgcgttc gtcggtgcct
     2101 ccggcgccgt cctcggcgtt gccgtggcgt tcgcaatgtt ctggc
//
LOCUS       DASYRV010000159         3162 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_891845, whole genome shotgun sequence.
ACCESSION   DASYRV010000159 DASYRV010000000
VERSION     DASYRV010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3162
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_891845"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(237..2351)
                     /gene="tkt"
                     /locus_tag="VGQ24_03995"
     CDS             complement(237..2351)
                     /gene="tkt"
                     /locus_tag="VGQ24_03995"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEV8454026.1"
                     /translation="MTSTRTAPAAVVAGPELDRLCINTIRTLSIDAVQAAKSGHPGTP
                     MALAPTAYCLWQRFLRYDPEDPRWPNRDRFVLSNGHASMLLYSLLHLTGVKAVNESYE
                     EVGRQAVTLDDIRNFRQAGSRCPGHPEYGWTSGVEATTGPLGQGVGMSVGMAAAGRWL
                     GATYNRPDFELFDYNVYTLCGDGDMMEGVGSEAASLAGHLKLSNLCWIYDNNRITIEG
                     PTDLAFTEDVATRFLAYGWNVTRVGDANDLDLLTRAYETFLATPDRPTLIIVDSHIGY
                     GAPNRQDTREAHGEPLGADEARLAKEFYGWDPDAQFLVPSGVREHFQAQVGRRGAEKR
                     AAWNQLVAAYRKKFPEAGLHVGCMRERTLPPGWDRDLPVFPPDPKGVAGRDASAKALN
                     AIAPRVPWLLGGSADLWPSTKTLLTFEGAGEFQAPGHGGDYGGRNLHFGVREHAMCTI
                     TNGLALSCLRPYASSFLVFTDYCRGALRIAALMEVPAIYIWTHDSINLGEDGPTHQPI
                     EHLASLRAMPGMIVLRPADANEVVEAWRLILGIKDRPVCLVLSRQLLPTFDRTVHAAA
                     SGVAKGAYILAESPSGKPDVLLLATGSEVTLCLEARERLRAEGIGARVVSMPSWEIFE
                     EQPEEYRDSVLPPEIDARVSIEAASTFGWAKWTGPKGTILGMRSFGLSAPIKVVAEHF
                     GFEPGHIVTAAREQVAAARARG"
     gene            complement(2348..>3162)
                     /locus_tag="VGQ24_04000"
     CDS             complement(2348..>3162)
                     /locus_tag="VGQ24_04000"
                     /inference="COORDINATES: protein motif:HMM:NF013116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transaldolase family protein"
                     /protein_id="HEV8454027.1"
                     /translation="FRPIHRATGGTDGWVSLEVSPLLAHDTARTIEQVKSLHRRLERP
                     NLFIKIPGTQEGLPAIEESIFAGVPINVTLLFSREQYLAAAGAYQRGVARRIAAGLDP
                     AVGSVASLFISRWDKAVLDKVPAALRGRLGIAIAGRTYRAYRGLLNSPRWRELAAAGA
                     RPQRLLWASTGTKDPQASDVLYIEALAAPDTINTMPDTTLLAFADHGEVRGTMAEDSG
                     DAESVLAEFGRAGVDIAALAADLQREGAEAFVKSWKGLLECIGSKSEALAAS"
BASE COUNT          537 a         1070 c         1056 g          499 t
ORIGIN      
        1 acgaaggtca cgaaggacac gaagggacat ttagagatcg cgatagactc ttttggtcaa
       61 cagcacacca tctgaggtcg atccaagcag caaacgaacg ttactggtgt gcagttgaac
      121 aaaaatccct cgcaaacgaa ctcagaatgc cacttcgtgt ccttgcagtt tccttcgtgc
      181 cttcgtggtg aagtatttgc cggggtggcg ccactagtcg tcacctagca gccccattac
      241 ccgcgagcgc gggcggcggc gacctgctcc cgcgcggcag tgacgatgtg gccgggctcg
      301 aacccgaaat gctcggcgac gaccttgatc ggggccgaca gaccgaagga gcgcatcccc
      361 aggatcgtac ccttggggcc ggtccatttc gcccacccga aggtggaggc cgcttcgatc
      421 gagacccgcg catcgatctc cggcggcaac acgctgtcgc ggtactcttc cggttgctcc
      481 tcgaagatct cccacgacgg catgctgacg actcgcgcgc cgatcccctc ggcccgcagc
      541 cgctcgcggg cctcgaggca aagcgtcacc tcgctgccgg tagcgagcaa cagaacgtcg
      601 ggcttcccgg agggcgactc cgccaggatg taagcgccct tggcgacacc actcgccgcc
      661 gcgtgcaccg tgcggtcgaa ggtaggcagt agctggcggg agagcaccag acagaccggc
      721 cggtccttga tccccaggat gagccgccag gcctcgacca cctcgttcgc gtcggccggc
      781 cggagcacga tcatccccgg catggcgcga agcgacgcca gatgctcgat cggctgatgg
      841 gtgggcccgt cctcgcccag gtttatggaa tcatgggtcc agatatagat cgccggcact
      901 tccatcagcg cagcgatccg gagcgcgccc cggcagtagt cggtgaacac cagaaagctg
      961 gacgcgtagg gcctgaggca cgacagcgcc agtccgttcg tgatggtgca catggcatgc
     1021 tcgcgcacgc cgaagtgcag gttgcgcccg ccgtagtccc ccccgtggcc cggcgcctgg
     1081 aattcgcccg ccccctcgaa ggtcagcagg gtcttggtcg agggccacag gtcggcggac
     1141 ccgccgagca gccagggaac ccgaggcgcg atcgcgttga gcgccttggc cgaggcgtcg
     1201 cggccggcga cgcccttggg atcgggcgga aagaccggga ggtcgcggtc ccagccgggt
     1261 ggcagcgtgc gttcgcgcat gcagccgacg tgcagacccg cctcgggaaa cttcttccgg
     1321 tacgcggcca ccagttggtt ccacgcggcc cgcttctcgg ccccgcgccg gccgacctgc
     1381 gcctggaagt gctcccggac accgctcgga accagaaact gtgcgtccgg atcccacccg
     1441 tagaattcct tggccaggcg agcctcatcg gcgcccagcg gctcgccgtg agcctcccgg
     1501 gtgtcctgcc gattgggagc gccgtagccg atgtggctgt cgacaatgat caaggtcggc
     1561 cggtcgggcg tggccagaaa ggtttcgtac gcacgggtca gcaggtcgag atcgttcgcg
     1621 tcgcccactc tggtcacatt ccagccatac gccaggaatc gggtggcgac atcctcggta
     1681 aacgcgagat cggtcggccc ctcgatggtg atccggttgt tgtcgtagat ccagcagagg
     1741 ttggagagct tgaggtgccc agccagggag gcggcctctg agcccactcc ctccatcatg
     1801 tcaccgtcgc cacacagggt gtagacgttg tagtcgaaca gctcgaagtc agggcgattg
     1861 taggtggcgc cgagccaccg gccagccgcg gccatgccga cgctcatccc cacgccctgc
     1921 cccagcgggc cggtcgtcgc ctcgacgccc gaggtccagc cgtactcggg atggccggga
     1981 cagcggctcc ccgcctgccg gaagtttctg atgtcatcca gcgtcaccgc ctggcgcccc
     2041 acctcctcgt aggactcgtt gacggccttc actccggtga ggtggagcag gctgtagagc
     2101 agcatcgagg cgtggccgtt cgagagcacg aagcggtccc ggttgggcca gcggggatct
     2161 tcgggatcgt agcgcaggaa gcgctgccac aggcagtacg ccgtgggcgc gagcgccatg
     2221 ggggtgccgg ggtgcccgga tttggcggcc tgcaccgcgt cgatcgaaag cgtccggata
     2281 gtgttgatgc agagccggtc gagctcgggt ccagccacga ccgcagccgg ggccgttcgg
     2341 gtcgaggtca tgatgccgcc agcgcctccg acttgctacc gatgcactcg agcagcccct
     2401 tccacgattt gacgaacgcc tcggcccctt cccgctgcag atcggcggcc agagcggcga
     2461 tgtccacccc tgccctcccg aactcggcga ggaccgattc ggcgtcccca ctatcctccg
     2521 ccatcgtacc gcgcacctca ccgtgatcgg cgaaagcgag cagagtggtg tcaggcatgg
     2581 tgttgatggt gtcgggcgcg gccagcgcct cgatatacag aacgtctgag gcctgcgggt
     2641 ccttggtgcc ggtgctggcc cagagtagcc gctggggccg ggcacccgcg gcagcgagct
     2701 cccgccagcg aggcgagttg agcagccccc ggtaagcccg ataggtccgg ccggcaatcg
     2761 cgatgcccag gcggccgcgc agtgccgcgg gcaccttgtc cagcaccgcc ttgtcccacc
     2821 ggctgataaa cagcgacgct accgagccca cggcgggatc gagccccgcc gcgatccggc
     2881 gcgcgacgcc gcgctggtac gccccggccg ccgccagata ctgctcccgg gagaagagga
     2941 gcgtgacatt aatcgggacg ccggcgaaga tcgattcctc gatggccggg aggccctcct
     3001 gggtccccgg aatcttgatg aacagattgg gccgttcgag ccgacggtgg agcgacttca
     3061 cctgctcgat agtgcgcgcc gtgtcatggg cgagaagcgg cgacacctcg agggagaccc
     3121 agccgtcggt gccgccggtc gcccggtgaa tcggccggaa ga
//
LOCUS       DASYRV010000160         3455 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1512100, whole genome shotgun sequence.
ACCESSION   DASYRV010000160 DASYRV010000000
VERSION     DASYRV010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3455
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1512100"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            163..1149
                     /locus_tag="VGQ24_04005"
     CDS             163..1149
                     /locus_tag="VGQ24_04005"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454028.1"
                     /translation="MSEFDLTLDRERLAEVRHGAVLVTTEPAVFRVQGPGALTCLQGL
                     LTNDLVKPGDNSLVYGALLTPKGAVVVDYWVIRQADAFTLVAPRSGHEASLDLFRRQL
                     PPRLAKVVDLTGEARVAWLIGAHGFQTLAKSGIGVPDASGRVASVGGEVSPVALALAP
                     EAAPFVALAVGAEPAVAALGSRLVLAGALPGDERDLHAARILCGWPALGAEIDERTLP
                     QEVRYDQIGGVSYTKGCYTGQETVARLHFRGHTNRELRGLRWRRAEPLAGRTIHKGER
                     EVGSVRSTLSLEDRAIGLGLIRREVGVGEELLAGGQPATVVALPFGPEDLDG"
     gene            complement(1218..1385)
                     /locus_tag="VGQ24_04010"
     CDS             complement(1218..1385)
                     /locus_tag="VGQ24_04010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454029.1"
                     /translation="MKTILVMAAVLALAGCEKKGTASGADTSAMAAPADTGMAGMTHS
                     DSTMARDTAKK"
     gene            1623..3086
                     /locus_tag="VGQ24_04015"
     CDS             1623..3086
                     /locus_tag="VGQ24_04015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium chelatase"
                     /protein_id="HEV8454030.1"
                     /translation="MIEPRTLGELKNSRWAEPPLRGRTVRDEIRSNLLQQLESGEPLF
                     PGIVGYEDTIVPQIVNALLARHHFILLGLRGQAKSRILRELTNLLDERIPTVAGSEVN
                     DDPFAPISKYAREILAECGDATPVAWLRRTQRYVEKLATPDVTIADLIGDVDPIKAAR
                     GGHLLSDELTMHFGLLPRANRGIFAINELPDLSGKVQVGLFNIMQEGDVQIKGYPVRL
                     PLDVLLAFTANPEDYTARGKIITPLKDRIGSEVITHYPRTVQLGMEITSQEAWVERGG
                     PELDIPDFILEVIERVAFEARDDKRVDKRSGVSQRLPISALENAVSNAERRAAALGED
                     RVVPRVSDVYAAVPSITGKLELEYEGELQGGDIIARDLIRRAAGRVLEERMGGADLGK
                     IVAWFDQGGALKVSGDERSDLCLKGFGMVPGLLEVVTEFGLAERKDAPRQVAACELVL
                     EGLAAQKRISRSEELGYTRAKPERREPGYGKGGISFG"
     gene            complement(3109..>3455)
                     /locus_tag="VGQ24_04020"
     CDS             complement(3109..>3455)
                     /locus_tag="VGQ24_04020"
                     /inference="COORDINATES: protein motif:HMM:NF024587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cytidylate kinase family protein"
                     /protein_id="HEV8454031.1"
                     /translation="ESVVAEAAAKGRLVLVGRAAPAVLGQERDSLHVKLVAPRPYRIQ
                     AAAGRLGVDLQKAAAVVDESDSTRDRYHRQYYHRDWNDPVNYHVVLNTGALGLDGVTS
                     LIVSEAQRRGWA"
BASE COUNT          574 a         1100 c         1189 g          592 t
ORIGIN      
        1 gcgtggtgat cgaagattcg ctgccgggac tcactgctgc ccgcgcggcc ggccttcgct
       61 gtgccatgct cgctacctcg catcccgagg atgcctgtgg tgacgccgac atggtgtggc
      121 gagacttcgt ggggcacgat ccagccgagc ttccctgggc ccatgtctga gttcgatctg
      181 acactcgacc gcgaacggct cgccgaggtg cggcacgggg cggtactggt gacgaccgag
      241 cccgccgtct tccgggtcca ggggcccggc gccctcacct gcctccaggg cctgctgacc
      301 aatgatctgg tgaagccggg tgacaacagc ctcgtgtacg gggcgctact cacccccaag
      361 ggcgcggtgg tggtggacta ctgggtaatc cgccaggccg atgccttcac cctggtagcg
      421 cctcgctccg gtcacgaggc gtcgctcgac ctctttcgcc gccagctgcc cccccgtctg
      481 gccaaggtgg tcgatctgac gggcgaggct cgggtggcgt ggttgatcgg cgcgcatgga
      541 ttccagacgc tggccaaatc cgggatcgga gtgccggacg cctcgggacg ggtggcgtcg
      601 gtcggtggcg aggtgagccc ggtggcgctg gccctcgcgc cggaggcagc gccgttcgtt
      661 gcactcgccg tcggtgcgga gccggcagtc gccgcgctcg gctccaggct ggtcttggcc
      721 ggcgcgctcc cgggcgatga gcgcgatctg catgcggccc ggatactctg cggctggccg
      781 gctctcggag ccgagatcga tgaacgcacc ctgccgcagg aggtacgcta cgatcagatc
      841 ggcggtgtct cctatacgaa ggggtgttac accggccagg agactgtggc gaggctgcac
      901 ttccggggtc acacgaaccg cgagctgcgc ggcctccgtt ggcggagagc ggagccgctg
      961 gccggccgca ccatacacaa gggagagcgc gaggtgggaa gcgtgcgctc gactctgagc
     1021 ctggaggacc gggccatcgg tctcgggttg atccggcgcg aggttggggt gggagaggag
     1081 ctgctggcgg gaggacagcc ggctaccgtc gtcgcgctcc cgtttggccc cgaggacctc
     1141 gacgggtgag cggccccgaa aaccagcgag ccccgaactg ggctcggggc tcgctgcaac
     1201 gctacgacat cgcgacgcta cttcttggcg gtgtcccgcg ccatcgtcga gtcggagtgc
     1261 gtcatgcccg ccatgccggt atcggccgga gcggccatag cggaggtatc cgcaccggac
     1321 gccgtgccct tcttctcaca gccggcaagc gcgagaaccg cggccatcac caggatcgtc
     1381 ttcattgtca ctccctcggg ggttggtgga acattttggt tgtggaatcg tcggaatggc
     1441 cgcgccacat actcgagggc gaaggtacct ccgggtttgc gtttgtcaag atgagcgaag
     1501 ttgcagaacc ggattgcagg tggccggtga ccaggcctcg actcttcgga accaagtcag
     1561 taagccattg aagccaacaa gcttagattt cgcaaccgaa ttcctgtctc ttgagcggtc
     1621 ccatgatcga gccacgcaca ttaggtgaac tgaagaacag ccgctgggcg gagcccccgc
     1681 ttcggggtcg aaccgtccgg gatgagatcc ggagtaacct gctccagcaa ttggagtcgg
     1741 gcgagccgct gttccccggc atcgtggggt acgaggacac gatcgtcccc cagatcgtca
     1801 acgcgttgct cgcgcgacac cacttcatcc tgctcggcct tcgcgggcag gcaaagagcc
     1861 gtatcctgcg tgagctcacc aaccttctcg acgagcgcat ccccactgtc gcgggaagtg
     1921 aggtgaacga tgacccgttc gcgcccatat cgaagtacgc ccgtgagatt ctggccgagt
     1981 gtggcgacgc gacgccggtc gcctggctcc gccgcaccca gcgctatgtc gagaagctcg
     2041 cgacgccgga tgttaccatt gccgacctca tcggcgatgt ggatccgatc aaggccgccc
     2101 gaggggggca tctgctctcc gacgagctca ccatgcactt cgggctgttg ccccgagcca
     2161 accggggaat ctttgccatc aacgagctgc cggatctgag cgggaaggtg caggtcggcc
     2221 tcttcaatat catgcaggaa ggcgacgtcc agatcaaagg ttatccggtg cgactcccgc
     2281 tggatgtgct gctcgccttc accgccaatc ccgaggacta caccgcccgc ggcaagatca
     2341 tcacgccgct gaaggaccga atcggctcgg aggtgatcac ccattatccg cgcacggtgc
     2401 agctcgggat ggagatcacc tcgcaggagg cgtgggtcga gcggggcggt ccggagcttg
     2461 acatcccgga cttcattctg gaggtcatcg agcgggtggc cttcgaggcc cgcgacgata
     2521 agcgggtgga caagcgctca ggggtgagcc agcggctgcc gatcagcgcg ctggagaacg
     2581 cagtctcgaa cgcggagcgg cgagccgcgg cccttggcga ggatcgagtc gtgccgcggg
     2641 tcagtgatgt ctacgcggcc gtgccgtcga tcacgggaaa gctggagctg gagtacgagg
     2701 gcgagctgca gggcggtgat atcatcgcgc gtgacctcat ccgccgcgcg gccggccggg
     2761 tactggaaga gcggatggga ggcgctgacc ttggcaagat cgtcgcctgg ttcgaccagg
     2821 gcggcgctct caaggtctcg ggagatgaaa ggtccgatct ctgcctcaag gggttcggca
     2881 tggtgcccgg cctgctcgag gtggtgacgg agttcggcct tgcggaacga aaggacgctc
     2941 cccggcaggt ggcggcgtgc gagctggtgc tcgaggggct cgccgcgcag aaacgcatca
     3001 gccggagcga agaactgggc tatacccggg ccaagccgga gcggcgagag ccgggctatg
     3061 ggaagggcgg gataagtttc gggtaagaca aaaccgtgag cgtttgctct acgcccatcc
     3121 ccggcgctgc gcctcggaca cgatcaacga tgtcaccccg tccaatccca gcgcgccggt
     3181 attcagcacc acgtggtagt tcaccggatc gttccagtcg cgatggtaat actgccggtg
     3241 gtagcggtcc cgggtgctat ctgattcgtc caccaccgcc gcggccttct ggagatccac
     3301 tcccagccgc ccggcggcgg cctgaatccg gtagggtctc ggtgcgacca gctttacgtg
     3361 taggctgtcg cgctcctgcc ccaggacggc cggtgcggct ctgcccacaa gaaccagcct
     3421 ccccttcgcg gccgcctcgg ccaccaccga ctcgg
//
LOCUS       DASYRV010000161         2450 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2732774, whole genome shotgun sequence.
ACCESSION   DASYRV010000161 DASYRV010000000
VERSION     DASYRV010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2450
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2732774"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..403)
                     /locus_tag="VGQ24_04025"
     CDS             complement(<1..403)
                     /locus_tag="VGQ24_04025"
                     /inference="COORDINATES: protein motif:HMM:NF015232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HEV8454032.1"
                     /translation="MSGASSWSFREEDAKRIQSILSAFLGESNARTALIVDRTGQMVA
                     TVGQAPAFDPTAFASLTAADFSANDQLARMLGESEFGALFHQGERESMYLADIARRVI
                     LVVLFDNRTTLGMVKLRVKTTVVQLTQVFTDM"
     gene            complement(414..683)
                     /locus_tag="VGQ24_04030"
     CDS             complement(414..683)
                     /locus_tag="VGQ24_04030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454033.1"
                     /translation="MRSRSWIFAGGVLVGVSAGWLLAQRRLTYHRRDLFSPRPLRRLA
                     ALGFLAGQNEVETVRLLRDYLAWERQPMLRRRAEAIVRRMEATLA"
     gene            complement(683..1273)
                     /gene="recR"
                     /locus_tag="VGQ24_04035"
     CDS             complement(683..1273)
                     /gene="recR"
                     /locus_tag="VGQ24_04035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HEV8454034.1"
                     /translation="MNAIEELITELARLPGIGRKTAQRLTFHLLQQPPEQAGRLASVL
                     VSVTERVRACEECGNLTEEQPCAICRDPRRDPGLVCVVEEPSTVAVVDRSTDFRGHYH
                     VLGGHLSPLDGIGPEALRLDGLVHRVQKGGVREVILATNPSMEGEVTATYIQQLLSGM
                     GVRVTRLARGLPMGGDLEYVDGVTLAHALVARQDVS"
     gene            complement(1277..1585)
                     /locus_tag="VGQ24_04040"
     CDS             complement(1277..1585)
                     /locus_tag="VGQ24_04040"
                     /inference="COORDINATES: protein motif:HMM:TIGR00103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEV8454035.1"
                     /translation="MADLQQLFQLGQQVQGRLQQLQSELANRTIETTAGGGMVRVTAD
                     GRGTVRAVSIDPAVFQDRDADFLSDLVLTAVAEAQRRAAEMLQAEMRKVPPLPFASPF
                     "
     gene            complement(1774..>2450)
                     /locus_tag="VGQ24_04045"
     CDS             complement(1774..>2450)
                     /locus_tag="VGQ24_04045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454036.1"
                     /translation="ETGIRRSVSPRLIVETLLLRWAMMDRIVDLEEVIQAGPRGRGAA
                     GQLSAGKGERSTPTDVTLSAAKGPKPELEPASSPASPAAPRPRGPTASLASPALDAIS
                     VAWPAIVVAVRSYSRFLGEAFAATEPAELELPWLTVVMREPNPLFAERLLQEAGKVEE
                     VLSRSLGQPVRLRVTAPSAAQETSPSKPRRMSESSLKAERLREFRSKDPALDTAADAL
                     DLEIVD"
BASE COUNT          412 a          848 c          799 g          391 t
ORIGIN      
        1 acatgtcggt gaacacctgc gtcagctgga ccaccgtcgt cttcacccgc agcttgacca
       61 tgcccaacgt ggtgcgattg tcgaagagca ccaccaggat cacccgccgg gcgatatcgg
      121 ccaggtacat cgactcccgc tcgccctggt ggaacaacgc gccgaactcc gactcgccga
      181 gcatgcgggc aagctgatcg ttggcgctga agtcggcggc ggtgagggac gcgaatgcgg
      241 tcgggtcgaa ggcgggggcc tgccccacgg tcgccaccat ctgtccggtc cggtccacga
      301 tcagagcggt gcgggcgttg gactccccga gaaaggcgct gagaatcgat tgaatgcgct
      361 tcgcgtcttc ctcccgaaag gaccagctcg aagcaccgct catcggccct gcctcatgcg
      421 agggtggctt ccatgcggcg cacgatcgcc tccgcgcgcc ggcgcagcat cggctgccgc
      481 tcccaggcga gatagtccct gagcagacgg accgtctcca cctcgttctg cccggccaga
      541 aaacccagcg cggcaaggcg gcggagcggt cgggggctga acaggtcgcg gcggtggtag
      601 gtgagccggc gctgtgccag cagccagccg gccgagacgc cgaccaggac accgccggca
      661 aagatccagc tgcgggagcg catcagctca cgtcctgccg cgccaccagc gcgtgcgcca
      721 gggtgacacc atcgacatac tcgaggtccc cgcccatggg gagcccacgg gcgagtcggg
      781 tcacccggac gcccatcccc gacagcagct gctggatgta ggtcgcggtc acctccccct
      841 ccatcgaggg gttggtcgcc aggatgacct cccgcacccc acccttctgg actcgatgca
      901 ccagcccatc caaccggagc gcctccggcc cgatgccgtc cagcggcgaa agatggccgc
      961 ccaagacgtg atagtgcccc cgaaaatcgg tcgaccgatc caccaccgcc accgtcgatg
     1021 gctcctctac cacgcagacc aggcccgggt ctcgccgggg atcccgacag atggcgcacg
     1081 gctgctcttc ggtgaggttg ccacactcct cgcaagcccg gacccgctcg gtgaccgaga
     1141 cgagtacgga cgcgagccgt ccagcctgtt caggaggttg ttggagcaga tgaaaggtga
     1201 gccgctgggc ggtcttccgg ccgatccccg ggagcctggc aagttcggtg atcagctcct
     1261 cgatcgcgtt caccggtcag aaaggcgagg caaagggcag cggcggcacc ttccgcatct
     1321 cggcttgaag catctcggcg gcgcgtcgct gggcctcggc caccgcggtg agcaccaggt
     1381 cgctgaggaa atcggcgtcg cgatcctgga agacggcggg gtcgatggag actgcccgca
     1441 ccgtgccccg gccatcggcg gtgaccctga ccatgccgcc gccggccgtc gtttcgatgg
     1501 tgcggtttgc cagctcgctc tgcaattgct gcagccggcc ttgcacctgc tgcccgagct
     1561 gaaagagttg ctgaagatct gccatgctat cgggtaatcc tgccatggtc gggaaggtag
     1621 agagagtgtt aagggactgc aacattctgc agtcgccagt cgccagtccg tcgccgagcc
     1681 tgatcctgaa gtatcggttc ccgggactgc tccctcaaac tcccactggc ccgcgacact
     1741 aggcttgcga ctggtgactg gcgactggcg actctaatcc acgatctcca aatctaatgc
     1801 atcggcagcc gtatcgaggg ccgggtcctt ggacctgaac tctcgcaatc gctcggcctt
     1861 gaggctcgat tcggacatcc ttcggggctt gctcggcgag gtttcctggg cggccgatgg
     1921 tgcagtgacc cggaggcgaa ccggctggcc gaggctccgg ctgagaacct cctccacctt
     1981 accggcctct tggagcagcc gctcggcgaa gagcggattg ggctcgcgca tgacgacagt
     2041 gagccagggg agctcgagct ccgcgggctc ggtggccgcg aacgcctcgc ccaggaatcg
     2101 actgtaggac ctgacagcca ccacgatggc aggccaggcc acactgatgg catcgagggc
     2161 cggggaggcg agcgaggccg tggggccgcg gggccgcggg gcggcggggc tcgccggtga
     2221 gctcgctggc tcgagctcag gcttcggccc cttcgctgcg ctcagggtga catccgtcgg
     2281 tgtactgcgc tcccccttac cggccgacaa ctgccccgct gccccgcggc cccgcggccc
     2341 cgcttggatc acctcctcga gatccacgat ccggtccatc atggcccagc gtagcaacag
     2401 cgtctccact atcagccggg gactcacgct gcgcctgatt ccggtctcat
//
LOCUS       DASYRV010000162         3619 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3147464, whole genome shotgun sequence.
ACCESSION   DASYRV010000162 DASYRV010000000
VERSION     DASYRV010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3619
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3147464"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..465)
                     /locus_tag="VGQ24_04050"
     CDS             complement(<1..465)
                     /locus_tag="VGQ24_04050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454037.1"
                     /translation="MPRVHDPDALGQPVAGFHRLDDLLDGGDVGAIAREDFIAERHPL
                     ARDHQGQADLLAVGAVVPAVAPLRQGILGRLPFEVDAGHVVGQQIVVEGEELPPPGDQ
                     MLLEGGLVRQQAIEGAVEAIIVDQRGRPGEQVLERRAPIPVLGDVELARGLAQ"
     gene            464..1369
                     /locus_tag="VGQ24_04055"
     CDS             464..1369
                     /locus_tag="VGQ24_04055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454038.1"
                     /translation="MTSEENLEWLRQTQRRYLVGTPKHELRKWAREIAEADDWRAVRD
                     GVEAKQCLGPDGRETFVLVRSIERREKERAMHARFCRRIEEGLSKLGYRLTKARRPLD
                     RGRLERQVGRLLERNPRAAGRYVIEFVADPANSAGLRLVWTARPEWDDWARWSEGCYV
                     LRTNIADWSPEDLWRTYIQLTEAEAAFRIQKSELAIRPVWHQRPDRVQAHILVCFLAY
                     VLWKTLEQWQRRAGLGASPRTILEELRRIQSTDVILPTTDGRDLRLRCVVRPDQAQAA
                     LLDRLGLDLPERLRIRPELARTAGM"
     gene            complement(1650..>3619)
                     /locus_tag="VGQ24_04060"
     CDS             complement(1650..>3619)
                     /locus_tag="VGQ24_04060"
                     /inference="COORDINATES: protein motif:HMM:NF038114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PxKF domain-containing protein"
                     /protein_id="HEV8454039.1"
                     /translation="YIDDIRPGSEPFEAPSYATMILNAPDGHSFGAPVAFVGDFNADQ
                     IPDLAVAELAGGHIYLFSGLDGSRLPQTFDTGCGGLFGGGAIHMTGIQVRDAIGNLVP
                     GIVAACPGRVYLFTASGNQPFWMTSQDLEGQDLEGFGVAAVPDKTGDGIQDILVGGNF
                     RSGVVLNGQTGEPIPDIRLPGFLYDTSTGHSLFDVGDVNHDGVRDYFVGDVVVSGTDG
                     SSILLFPSPPSPPVVAYPSGAVPLGDVDGDGVTDIAISANAPGDAIPGYVFVFSAGQF
                     DAGTNHAKLLYTIVGDSDINGSYNGLAPAGDFDGDGITDLLVAQGASTSSDGEIGGPG
                     RVVVYSGKFNDGGTSGSRLFELDDPTGANPSGFGKGALFPNAIAGGVDLNGDGIPDIL
                     VGAPWANEGQGQVFLFLSSASPTATPATASGNAVAVSPAPGVTVTFSGVSASGDTTVT
                     ASDTGPSLPSALTTGDPPTFYEITTTAAYSAPITVCVKYDPAQSADPATLRILHFESG
                     AWVDVTTSIETSTRTICGRVNTLSPFVIATLAYRFSGFFEPVNNLPTVNLVKGGSGVP
                     VKFSLDGNQGLNIFAAGYPASGSVECNSTDPIDVVEETVSASTSGLTYDASAGQYVYV
                     WKTDKSWASTCRQFVLRLNDGSYHRANFKFR"
BASE COUNT          649 a         1189 c         1161 g          620 t
ORIGIN      
        1 ctgtgcgagc cctcgagcga gctccacatc gccgaggact ggtatcggcg cacggcgctc
       61 gaggacctgc tcgcccggcc ggccccgctg gtcaacgatg atcgcctcta ccgcgccctc
      121 gatcgcctgc tgccgcacaa gaccgccctc gagcagcatc tggtcgcccg gtggggggag
      181 ctcttcgccc tcgactacga tctgttgccc tacgacgtga ccagcatcta cttcgaaggg
      241 caggcggccc agaatcccct ggcgcaacgg ggctacagcc gggaccaccg ccccgactgc
      301 cagcaggtct gcttggccct ggtggtcacg cgcgagggga tgccgctcgg cgatgaagtc
      361 ttccctggca atcgcaccga cgtcgccacc gtcgaggaga tcatcgagac gatggaagcc
      421 cgctacgggc tggcccagcg catctgggtc atggacccgg ggcatgacca gcgaggagaa
      481 cctggagtgg ctgcggcaga cgcagcgtcg gtacctggtc gggaccccga agcacgagct
      541 ccgcaagtgg gcgcgcgaga tcgccgaggc cgacgactgg cgcgccgtgc gggacggggt
      601 cgaggccaag cagtgtcttg ggccggatgg gcgggagacc ttcgtcctcg tgcgctccat
      661 cgagcggcgg gagaaggagc gagccatgca cgcgcgcttc tgccggcgga tcgaggaggg
      721 gctgagcaag ctcggctacc ggctcaccaa ggcccgccgg ccgctggacc gcggccgcct
      781 ggagcgccaa gtgggccgtc tgctggagcg caacccgcgc gcggccgggc gatacgtcat
      841 cgagttcgtc gccgaccctg ccaactctgc gggcctgcgg ctcgtctgga cggcgcgccc
      901 ggaatgggac gactgggccc gctggagcga aggctgctac gtgctccgca ccaacattgc
      961 cgactggagc cccgaggacc tctggcgcac ctacatccag ctcacggagg ccgaggcggc
     1021 cttccgcatt cagaagagcg agctcgcgat tcgccccgtg tggcatcagc gccccgaccg
     1081 cgtgcaggcc cacatcctgg tctgcttcct ggcctacgtc ctctggaaaa ccctggagca
     1141 gtggcagcgg cgggcgggcc tcggcgcgag cccccgcacc atcctggaag aattgcgccg
     1201 catccagagc actgacgtca tcctccccac caccgacggg cgcgacctgc gcctccgctg
     1261 cgtggtccgg cccgaccagg cccaggccgc cctgcttgat cgcctcggcc tggatctccc
     1321 cgagcgtctc cggatccggc ccgaactcgc ccgaacggcg ggaatgtagt ggcgactttt
     1381 cgcctaagtg cccgattttt cgttctcgac cccttcgaac tgcggaagtt gggctaaggg
     1441 cgcgccgtgg tcgccccggc ggcgcccgtc agaggtttcg cagccgcgga tccaggtggt
     1501 cgcgcagcca gtcgccgagc aggttgatcg agagcacggt caccaggatc gccagtcccg
     1561 ggaacgtggt cagccaccag gcccggccga tgtaggcccg cccgtcggct cttccggcgc
     1621 tttttgctat gaaatgagct cggcttccgc tagcggaatt tgaagttcgc tcgatgataa
     1681 cttccatcat tcagcctgag aacgaactgc cgacaagtgc ttgcccacga cttgtcggtc
     1741 ttccagacat atacatactg acctgcagag gcatcataag ttagcccgct ggtcgaggca
     1801 cttacggtct cctcgacgac gtcgatcggg tccgttgagt tgcactccac cgatccggat
     1861 gcggggtagc cggctgcgaa aatgttgagc ccctgattgc cgtccaggct gaacttcact
     1921 ggcacgccac tgccaccctt cacgaggttg acagtcggca gattgttcac cggttcaaag
     1981 aaaccactga atctgtatgc caatgtggca atgacgaacg gtgagagcgt attgacccgc
     2041 ccgcagatag tcctggtact cgtctcaatt gaggttgtga cgtcgaccca cgcgccagac
     2101 tcaaagtgga ggatcctgag ggttgcggga tcggcagatt gcgccggatc atacttcacg
     2161 cacaccgtga tcggcgcaga gtaggcagcc gttgtggtga tctcgtaaaa cgtcggcggg
     2221 tcgcccgtag tcaaggcact cggcaggctt gggccggtgt cgctcgccgt tacggtcgtg
     2281 tccccggagg ccgagacacc cgagaaggtc accgtgacgc cgggcgcggg ggaaaccgcc
     2341 acggcattcc cggacgccgt cgccggcgtg gcggttgggg aggcagagct caggaacaga
     2401 aagacctgac cctgaccctc atttgcccac ggggctccga cgaggatgtc tgggatgcca
     2461 tcgccgttga gatccactcc tccggcaatg gcattgggga agagggcgcc cttcccgaag
     2521 ccactggggt ttgctcccgt ggggtcgtcg agctcgaaca acctgctgcc gctagttcca
     2581 ccgtcgttaa actttccgct gtagacgacc acgcggccgg gtccgccgat ctccccgtct
     2641 gacgacgtgg aagccccttg ggctaccagc aggtctgtga tgccatcgcc gtcgaagtcg
     2701 ccggcggggg cgaggccgtt gtagctgccg ttgatatcag aatcaccgac gatggtgtag
     2761 agcaacttgg cgtggtttgt gccagcgtcg aactgtcccg cgctgaatac gaacacgtag
     2821 cccgggatgg cgtctccggg tgcgttggcc gaaatcgcaa tgtccgtgac cccgtcgccg
     2881 tccacgtccc ccaggggcac cgcgccgctc ggatacgcca ctactggagg gctcgggggg
     2941 ctcggaaaca gcaggattga tgacccatcg gttccgctca cgacaacgtc gcccacgaag
     3001 tagtcacgaa cgccatcgtg gttcacatct ccgacgtcga agagggagtg gcccgtactc
     3061 gtgtcgtaga gaaaccccgg caacctgatg tctgggattg gctcgcccgt ctgaccgttc
     3121 agcacgacgc ctgaccgaaa atttccgccc accaggatgt cctggattcc atccccagtt
     3181 ttgtcaggga cagcggcgac accaaacccc tcgagatcct gcccctcgag atcctggctg
     3241 gtcatccaga atggctgatt gccgctggca gtgaagaggt agacccgacc cgggcatgcc
     3301 gcgacgatgc cgggaacaag attcccaata gcatcgcgga cctggatccc ggtcatatgg
     3361 atggcacccc caccaaagag accgccgcag ccagtgtcaa acgtttgagg gagccggctc
     3421 ccgtccagcc cgctgaagag gtagatgtgc cctccggcta gctctgccac cgcaaggtca
     3481 ggaatctggt cggcgttgaa atcgccgaca aacgcgacgg gcgccccaaa gctgtgaccg
     3541 tcgggtgcgt tgagaatcat agtcgcgtag gagggagcct cgaagggttc gctccctggg
     3601 cggatatcgt cgatataga
//
LOCUS       DASYRV010000163         7637 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_474568, whole genome shotgun sequence.
ACCESSION   DASYRV010000163 DASYRV010000000
VERSION     DASYRV010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7637
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_474568"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..979
                     /gene="pyk"
                     /locus_tag="VGQ24_04065"
     CDS             <1..979
                     /gene="pyk"
                     /locus_tag="VGQ24_04065"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEV8454040.1"
                     /translation="GIDVTAPALTEKDIEDVGQAATLGVDYIALSFVRRPEDIEQLRE
                     LVPRGVKLVAKIEKDTALKNLCGILDASDAIMVARGDLGVELPFEEVPLIQKQIIRES
                     SLHGKPVITATQMLESMVHAPRPTRAEASDVANAILDGTDAVMLSAETAVGEYPLEAV
                     QAMDRIAREMESQRQARGASIDLALGRRSADDGALLHHRSPQSGPIRTEDAIAVAVCA
                     AAEMLSAPLIVCFTSSGFTARMVATCRPTVPVFACTPEPETFRQLSLVWGVTPALTEH
                     STNYDSMLAVARQQILERGLAQPGERLVVTAGVPFDMPGTTNLLKVEAV"
     gene            983..1759
                     /locus_tag="VGQ24_04070"
     CDS             983..1759
                     /locus_tag="VGQ24_04070"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEV8454041.1"
                     /translation="MRLTFLGTGTSFGVPQIGCDCAVCRSTDPRDKRTRSGAVLESAG
                     STILIDTPPELRLQLITAGFSRIDAVVYTHEHADHINGIDDLRIFSVRRREPLPLYGP
                     AETLQRLRASFNYIFDDAVHPFEGTSKPTLGLHVAEPDRMIDVAGVAVLPLAFQHGHL
                     RVFGYRFGNLAYITDVKAIGRPERERLRDLDVLVLNALWWRPHPTHLSISEAVETAQA
                     LGARRTYLTHLTHETGHADLEARLPAGILPAYDGLTVEVG"
     gene            1756..3150
                     /locus_tag="VGQ24_04075"
     CDS             1756..3150
                     /locus_tag="VGQ24_04075"
                     /inference="COORDINATES: protein motif:HMM:NF012562.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEV8454042.1"
                     /translation="MIRLAYGRMLRDALDGKHGLPREQLADLARRFTPIRQEVQSRRA
                     AGEYGFYGLVEQGPTVRAIKTFAEGLGQAHDHVLVLGIGGSALGTKALLNALRRPGWN
                     EWDDEGREFFPRLTVLENVDPTSVAAALERIDPRRVLVNVISKSGGTAETMAQYLVVR
                     GWLEKTLGQAAHRHLVFTTDPSRGALRELAQRDHVPTLDVPADVGGRFSVLSPVGLLP
                     AALVGIDVDGLLSGARRALERSETDDLLQNPPALYAALHWLADTSLAARVHVLMPYTD
                     RLREFAEWYRQLWAESLGKRVDRGGKVVHLGPTPVAAVGATDQHSQVQLFMEGPFDKV
                     ITFITVEDFGVDVPIPNPPDPSEALPSDLAYLPGHTLGELLRAEYQATSAALAQMGRM
                     TCTLRFPDLSADTLGEAIMFFQLATGYAGAWYGIDPFDQPGVELGKRLTYAAMGRPGY
                     ESESRQASISTDEV"
     gene            3267..4682
                     /locus_tag="VGQ24_04080"
     CDS             3267..4682
                     /locus_tag="VGQ24_04080"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HEV8454043.1"
                     /translation="MADATQRVVDLYDGAVIQVPGGIKLRDPSKLRSAATDRLAWQAV
                     FGSSGEREAARWLLWELGQLTGARPASINDLYMARGRGECGGFTVPAINVRMLAYDTA
                     RAVFRAARAGRAGTIILEIARSEIAYTEQRPAEYVSVMIAAALREGYTLPLFIQGDHC
                     QVNQKKYQADPEGEVGEVKKLIAEEVGAGFYNIDVDTSTLVDLSRPTLSEQQRLNYER
                     AADITRFIRELEPDGVTVSVGAEIGEVGMKNSTVEELHAFMQGYNRSLAAAGAHAGIS
                     KISVQTGTSHGGVVLPDGSIADVKLDLQALAALSEVAREEYELAGAVQHGASTLPSNA
                     FGNFPRIETAEIHLATNFQNIVFDHPRLPADLRDRMRGWLEENAAGERKSGDTDEQFY
                     YKARKKAIGPFKRDLWSLPEDVRNAIAADLEKTFAFLFEQLNVNGTEDQVHRFIQAPI
                     QHHAALKPVLVAAADDPDAGE"
     gene            4693..5097
                     /locus_tag="VGQ24_04085"
     CDS             4693..5097
                     /locus_tag="VGQ24_04085"
                     /inference="COORDINATES: protein motif:HMM:NF024143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HEV8454044.1"
                     /translation="MRGNQRREVVYVERGGDSSAKWLFWGALLGAGVALLYAPSSGEE
                     TRRSLQRRLWKLRAMTEERLDEITQQFGGAKDSLEGVMDEDEDEENQGDLEGRGFQGR
                     SPRSSPREELERRLADARARRRSPADLEEPLA"
     gene            5142..6029
                     /locus_tag="VGQ24_04090"
     CDS             5142..6029
                     /locus_tag="VGQ24_04090"
                     /inference="COORDINATES: protein motif:HMM:TIGR00765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEV8454045.1"
                     /translation="MRRTLQAADEDNIPFLASALTFDALLAAVPFVLLLLIGLTHLAQ
                     AVTQGPEVDTLSLFHRFLPPHSGLPNRDPFGVIERLLTGITENRGKLSVYAAPAFLWF
                     STRLFAGIRTSLNDIYDVSLRPPRPQPFILVYLLAKLRDAFMVVGTVILFLANTLLTT
                     GLAILQARGSASVPQLAFFVSSVGRLLGELLAFAFSVSLFYVTYRYASVRRLPWKTAL
                     LASVFTAVLFEVAKRLYGLYLANFASFEAQGGDANLGAAVLFILWVYYTAIVFLLGAV
                     VAETWELRKMQQRQRAILG"
     gene            6141..6240
                     /gene="ffs"
                     /locus_tag="VGQ24_04095"
     ncRNA           6141..6240
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="VGQ24_04095"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            6262..>7637
                     /gene="dnaX"
                     /locus_tag="VGQ24_04100"
     CDS             6262..>7637
                     /gene="dnaX"
                     /locus_tag="VGQ24_04100"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR02397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEV8454046.1"
                     /translation="MISLARRYRPKRFADLLVQDHVAAVLRGAVSRGRVGHGYLLTGP
                     RGVGKTTAARILAMALNCPQREPSGEPCGECENCLRVWNGSADLDVVEIDAASNRGVD
                     DARDLRERAMYAASREGHHKVYIVDEAHMLTREAWNALLKILEEPPSGVVFVFATTEP
                     QKIATAAAPVMSRLQRFDFRRIGPAAIRDRLRQVLAAEQLEADDDALTLIARHADGGM
                     RDALSVLDQCLSFGEGAITVQRVREVLGLVHEELYEEVLQLVAERRPAGVFPLLDRLT
                     EAGVDLAEFIGGVADVFRGLLMLQVGAEPEGVTEALRATLERYRDRLEAGDVLRMLRL
                     LADNETGIRRSVSPRLIVETLLLRWAMMDRIVDLEEAIGAGRRGGGEAGKQESEKQEA
                     GKQAPRPEASKAQPSAAPLGPSRVPASPPLASAPALDAISVAWPAIVVAVRSYSRFLG
                     EAFAATEPA"
BASE COUNT         1273 a         2496 c         2545 g         1323 t
ORIGIN      
        1 ggggatcgat gtgactgcgc cggcattaac cgagaaggac atcgaggacg tcggccaagc
       61 tgccacgctg ggcgtcgact acatcgccct ctcgttcgtg cgccggccgg aggatatcga
      121 gcagctccgc gagctggtgc cccggggcgt aaagctggtg gccaagatcg agaaggacac
      181 ggccctcaaa aatctctgcg gcattctgga tgcgtccgac gccatcatgg tggcccgtgg
      241 tgacctgggc gtggagctgc cattcgagga agtgccgttg atccaaaagc agatcatccg
      301 cgagtcgagt ctgcacggaa agccggtgat cacggcgacc cagatgctcg agtccatggt
      361 ccacgcaccc cgtcctaccc gcgcggaggc gtccgacgtc gccaacgcca tactggatgg
      421 caccgacgcg gtcatgctct cggccgagac cgcggtgggg gagtatccgc tggaggcggt
      481 gcaggccatg gatcgcattg ccagggaaat ggagagccag cgacaggcgc gcggtgcctc
      541 catcgacctc gcgctgggcc gccgttccgc ggacgatggg gcgctgttgc accaccgctc
      601 gccgcagagc ggtcccatcc gcacggagga cgccatcgcg gtggcggtct gcgcggcggc
      661 ggagatgctg tcggcgcccc tcatcgtgtg ctttaccagc agcgggttca ccgcgcggat
      721 ggtggccacc tgccgcccga cggtgccggt cttcgcctgc accccggagc cggagacgtt
      781 ccggcagctg tcgctggtgt ggggcgtcac gccggcgctc accgaacact ccaccaacta
      841 cgacagcatg ctcgcggtcg cgcgccagca gatcctcgag cgcggcctgg cccagccggg
      901 cgagcgcttg gtggtaaccg ccggcgttcc cttcgacatg cccgggacta ccaacctcct
      961 caaggtcgaa gcagtttaga agatgcggct cacgttcctg ggcacgggca cgtcgttcgg
     1021 cgtgccccag atcgggtgcg actgcgcggt ctgtcgctcg accgacccgc gggacaagcg
     1081 cacccgatcg ggagcagtcc tcgagtccgc cggctcgacc attctcatcg acacgccgcc
     1141 agagctccgc ctccagctca tcaccgccgg attttcccgg atcgatgcgg tggtctacac
     1201 tcacgagcat gccgatcaca tcaacgggat cgacgacctg cgcatattct cggtccggcg
     1261 ccgggaaccg ctaccgctct acggtcccgc tgaaacgctg cagcgtctgc gcgcttcctt
     1321 caattacatt ttcgacgatg cggtgcatcc gttcgaggga acatcgaaac ccacgctggg
     1381 actgcatgtg gcagagccgg accggatgat cgacgtcgca ggtgtcgcgg ttctcccgct
     1441 cgcgttccaa cacggccacc tccgggtgtt cggctaccgc ttcgggaacc ttgcgtacat
     1501 caccgacgtc aaggcaatcg gcaggcccga gcgggagcgg cttcgcgatc tcgatgtgct
     1561 ggtgctcaat gccctgtggt ggcggcctca cccgactcac ttgagcatct ccgaagccgt
     1621 ggaaacggcc caggcgctgg gcgcccgacg aacctacctc acgcacttga cccacgagac
     1681 cgggcatgcg gacctggagg ccaggctccc cgcaggcatt ctaccggcct atgacggcct
     1741 gaccgtggag gtaggatgat ccggctggcc tatgggcgca tgcttcggga cgccctcgat
     1801 gggaagcatg gcctgccgcg cgagcagttg gccgacttgg cccggcgatt tacccccatt
     1861 cgtcaggaag tgcaaagccg tcgagccgcc ggggagtacg gcttctatgg actggtcgag
     1921 cagggcccca ccgtccgcgc gatcaagaca ttcgccgaag ggctcggcca ggcacacgat
     1981 cacgtattgg tgttggggat cggtggctct gcgcttggca ccaaggcgct gctcaacgcg
     2041 ctccggcggc cgggatggaa cgaatgggat gacgagggaa gggagttctt tccccgcctg
     2101 accgtgctgg agaacgtgga ccccacatcg gtggctgccg cactggagcg aatcgatccc
     2161 cggcgggtgc tggtcaacgt aatcagcaag tccgggggga cggccgagac aatggcgcag
     2221 tacctcgtgg tccggggctg gctggaaaag acgctcggcc aggccgcaca tcggcacctg
     2281 gtgtttacca ccgacccgtc ccgaggggcg ctacgggagt tggcccagcg cgatcacgtg
     2341 cccacgctcg acgtacccgc ggatgtcggc ggcagattca gcgtactctc tcccgtcgga
     2401 ctcctgccgg cggcgctggt cggcatcgac gtcgatgggc tgctgtccgg cgcccgccgc
     2461 gcgctggagc gctcggaaac cgacgacctg ctccagaacc cgcctgcgct ctacgccgcc
     2521 ctgcactggt tggccgacac tagcctcgcc gcacgggtgc acgtgctgat gccatacacc
     2581 gatcgtctgc gggagttcgc cgagtggtac cggcagttgt gggccgaaag cctggggaag
     2641 cgggtcgatc ggggtggcaa ggtcgttcat ctcggaccca ctccggtcgc cgcggttggc
     2701 gccaccgacc agcacagcca ggtgcagctc ttcatggaag gtccgtttga caaggtgatc
     2761 accttcatca ccgtcgagga cttcggcgtg gacgtgccga taccgaatcc gcccgaccct
     2821 tcggaagcgc ttccctctga cctggcgtac ctaccgggcc acaccctggg agagctgctc
     2881 cgggcggaat accaggccac gtcggccgcg ttggctcaga tgggacggat gacctgtacg
     2941 ctccggttcc ccgatctctc cgccgacacg ttgggagaag ccatcatgtt cttccagctc
     3001 gccaccgggt acgcgggggc gtggtatggc atcgacccat tcgatcagcc cggtgtggag
     3061 ctgggaaagc ggctcaccta cgccgccatg gggcgcccgg gatacgagtc agagtccaga
     3121 caagcatcca tcagcactga tgaggtctga agtcttcctc atccctcgct tccaccctgg
     3181 gccggaaacg cgttgcgggg gtcctgctcc agccctacct ttggcaaata gtcttaggcc
     3241 aagggttccc aagaggatgg accggcatgg cagatgcaac tcagcgagtc gtggatctgt
     3301 acgacggtgc ggtcattcag gtacccggtg gaatcaagct gcgggatccc tccaagctcc
     3361 gctctgcggc taccgaccgc ctggcctggc aggccgtgtt cggctcttcc ggtgagcgcg
     3421 aggcggcgcg gtggctcctc tgggagttgg ggcagctcac tggggccagg ccggcctcga
     3481 tcaacgacct gtacatggcc cggggccgcg gcgagtgtgg gggcttcacc gtaccggcca
     3541 tcaacgtgcg gatgctcgcc tacgatacgg ccagggcagt ctttcgtgcc gcccgggccg
     3601 gcagggcggg caccatcatc ctggagatcg cccggtcgga gatcgcttat accgagcagc
     3661 gtccggccga gtacgtatcg gtgatgatcg ccgccgcgct gcgcgaaggc tacaccttgc
     3721 cgctcttcat ccagggcgac cattgtcagg tgaatcaaaa gaagtaccag gcggatcccg
     3781 aaggagaagt cggtgaggtg aaaaagctca tcgccgagga ggtcggcgcg ggcttctaca
     3841 acatcgacgt ggacacatcc acgctggtgg atctttcccg gcccaccctg tcggagcagc
     3901 aacggctcaa ctacgagcgc gccgccgata tcacccgttt cattcgagag ctggagccgg
     3961 atggagtaac cgtgtccgtc ggcgcggaga tcggcgaagt cggcatgaag aacagcaccg
     4021 tggaagagct gcatgccttc atgcagggct acaatcggag ccttgccgcc gccggcgcgc
     4081 acgccggcat cagcaagatc tcggtccaga cgggcacctc ccatggcggt gtggtgctgc
     4141 ccgatggaag catcgcggac gtgaagctgg acctccaggc tcttgccgcc ctctccgagg
     4201 tggctcgtga ggaatacgag ctggcggggg cagtgcagca cggggccagc accctcccct
     4261 ccaatgcctt cgggaacttc ccccgcatcg agaccgccga gatccatctc gctaccaact
     4321 tccagaacat cgtgttcgat cacccgagac tccccgcgga tctgagagat cggatgcgcg
     4381 gctggctgga ggagaatgcc gcgggcgagc gcaagagcgg agacaccgac gagcagttct
     4441 actacaaggc tcgcaagaag gcgatcggcc cattcaagcg ggatctctgg tcgttacccg
     4501 aggacgtgcg gaacgccatc gcggccgatc tggagaagac ctttgcgttt ctgttcgaac
     4561 agctgaatgt gaacggcacg gaggaccagg tacaccgatt catccaggcc ccgatacagc
     4621 atcacgcggc actcaagccg gtgctggttg cggcggccga cgacccggac gccggggaat
     4681 aggaggaacc gcatgcgtgg caatcagcgc agggaagtcg tatacgtgga gcggggaggc
     4741 gattcgtccg ccaagtggct cttctggggc gcgctgctcg gcgccggggt ggcgctgctc
     4801 tacgcgccga gtagcgggga agaaacccgt cgcagtctcc agcgcaggct gtggaagctt
     4861 cgcgcgatga ccgaggaaag actggacgag atcacccaac agttcggtgg tgccaaggac
     4921 tcgctggaag gagtgatgga cgaagacgag gacgaggaaa accaaggcga cctcgagggg
     4981 cgcggctttc agggccgcag tcccaggtcg tcgccgcgag aggagctgga acggcggctg
     5041 gcggacgcgc gcgcacggcg gaggtcgccc gctgatctcg aggagccgct cgcctgagcg
     5101 gggttcggcc gggcgggtgg caccattcac ccgccggctt cattcgccgc actctgcagg
     5161 cggccgacga agacaacatt ccgttcctcg ccagtgccct gaccttcgac gcgctgctcg
     5221 cagcggtgcc gttcgtcctg ctgctgctga tcggcctgac ccacctggcg caggcagtca
     5281 cccaggggcc cgaggtcgat accctctcct tgttccatcg gttcctgcca ccccactccg
     5341 ggttgccgaa ccgcgatccc ttcggtgtca tcgagcggct gctgaccggt atcaccgaga
     5401 accggggaaa gctctcggtc tatgccgcgc cggctttcct ctggttcagt acccgcctct
     5461 tcgccggcat ccggacctcg ctcaacgaca tctacgacgt gtcgctgcga cctccccggc
     5521 cgcaaccgtt cattctggtg tacctcctgg ccaagctccg cgatgccttc atggtggtgg
     5581 gcactgtcat cctgttcctg gccaacaccc tgctcacgac cgggctcgcg attctccagg
     5641 cgcgcggctc cgccagcgtc ccccagctcg ccttcttcgt ctccagcgtc ggccgcctgc
     5701 tgggtgagct gctggccttc gccttttccg tttccctctt ttacgtgacc tatcgatatg
     5761 cctccgtgcg ccggctcccc tggaagaccg cgctgctggc ctcggtcttc acggccgtgc
     5821 tcttcgaggt cgccaagcgg ctgtacggcc tgtacctcgc caacttcgcc tccttcgagg
     5881 cgcaaggcgg agacgccaat ctgggtgcgg cggtgctgtt catcctctgg gtgtattata
     5941 ccgcgatcgt tttcctgctc ggtgcggttg tcgccgagac ctgggagctg cggaagatgc
     6001 agcagcgtca gcgcgccatc ctcggctgag ctcaactcga cactcactat aagtggaggc
     6061 agatgtgccc gaggtgcttc gtaacgcggg gttcatcgtg gtggtggctg tcggctcggg
     6121 gagggggtta tattccgggt gcctcaggtc cgaagggcgc cggcgcgtga atcgcgtcag
     6181 gacctcgccg gtagcagcgc taagcgatgt ccggtgtcgc ttcggggtgc ctgaggcact
     6241 tttctttcag tctccgctga tatgatctct ctcgctcgcc gataccgccc caagcgcttt
     6301 gccgatctcc tggtgcagga ccacgtcgcg gccgtcctgc gcggcgcggt atcccgcggg
     6361 cgggtgggcc acggctactt gctcaccggg cccaggggcg tggggaagac cacggccgcg
     6421 cgcatcctgg ccatggcgct caactgcccg cagcgcgagc cctcgggcga accctgtggc
     6481 gaatgcgaga actgcctccg ggtgtggaac ggatcggccg acctcgacgt ggtcgagatc
     6541 gacgccgcca gcaatcgggg cgtcgatgat gcacgcgacc tgcgcgagcg cgccatgtac
     6601 gccgcgtcga gggaagggca ccacaaggtc tacattgtgg atgaagccca catgctgacc
     6661 cgggaggcgt ggaacgcgct gctcaagatc ctggaggagc ctccttccgg tgtcgtgttc
     6721 gtgttcgcca cgaccgaacc ccagaagatc gctacggccg ccgccccagt catgtcccgc
     6781 ttgcagcggt ttgactttcg ccggatcggt ccggccgcca tccgcgatcg gctccggcag
     6841 gtgcttgcgg ccgaacagct ggaggcggat gacgatgccc tcacgctgat cgcccgccac
     6901 gccgacggcg gcatgcggga tgcgctctcc gtcctggacc agtgcctcag cttcggcgag
     6961 ggtgccataa ccgttcagcg ggtacgtgag gtgctcgggc tggtgcacga ggagctctac
     7021 gaggaagtgc tgcagctggt cgcggagcgc cgcccggccg gtgtcttccc cttgctcgat
     7081 cgcctgacgg aagccggagt ggacctcgcc gagttcatcg gcggcgtggc ggacgtattt
     7141 cgtggcctgc tgatgctgca ggtcggtgcg gagcccgagg gtgtgaccga ggcgttgcgt
     7201 gcgacgctcg agcgctaccg tgaccggctg gaggcaggag acgtactccg gatgctgagg
     7261 ctcctcgcgg acaatgagac cggaatcagg cgcagcgtga gtccccggct gatagtggag
     7321 acgctgttgc tacgctgggc catgatggac cggatcgtgg atctcgagga ggcgataggg
     7381 gccggaaggc gaggaggcgg ggaagcgggg aagcaggaat cggagaagca ggaagctggg
     7441 aagcaggcac ctaggccgga agcctcaaag gcgcagccga gcgccgcacc gctggggcct
     7501 tcccgcgtcc ctgcttcccc gccgctggct tcggcgccag ccctcgatgc catcagtgtg
     7561 gcctggcccg ccatcgtggt ggctgtcagg tcctacagtc gattcctggg cgaggcgttc
     7621 gcggccaccg agcccgc
//
LOCUS       DASYRV010000164         2486 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1900720, whole genome shotgun sequence.
ACCESSION   DASYRV010000164 DASYRV010000000
VERSION     DASYRV010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2486
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1900720"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..817)
                     /locus_tag="VGQ24_04105"
     CDS             complement(<1..817)
                     /locus_tag="VGQ24_04105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEV8454047.1"
                     /translation="MSEPAKELTIPKEAAEPTAPMPWLEEMPPRQIVAELDRYIVGQE
                     AAKKAVAIAVRNRWRRQQAPEDIRDEILPNNIIMIGPTGVGKTEIARRLARLAGAPFI
                     KVEASKFTEVGYVGRDVESMVRDLVDSAINMVRGEREDEVYPTAEARAEERLLDLLLP
                     PGPELVSGPELVPGAEPQKPRDDEPSKERSRFVVSSQGEARSEQEPSAEDKASTERRN
                     RTREKLRGLLKEGKLEERELEIEVTQQGPPMFEMMQPPPGMEGTDFNFTEWLQD"
     gene            complement(915..1472)
                     /gene="hslV"
                     /locus_tag="VGQ24_04110"
     CDS             complement(915..1472)
                     /gene="hslV"
                     /locus_tag="VGQ24_04110"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013939585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HEV8454048.1"
                     /translation="MLHFHGTTILGVRRDGRVALGGDGQVSMGETVFKSQGSKVRALK
                     GGKVLAGFAGSVADALTLYEKFEEKLDRYPGNLPRAAVELAKDWRSDRMLRRLEALLV
                     VADLDHSFLLSGTGELIEPDDGIVAIGSGGNFALAAARALLSEPDWTARKITQRSLEI
                     AADICVFTNRNITIIELPGDGRSKK"
     gene            complement(1548..2435)
                     /locus_tag="VGQ24_04115"
     CDS             complement(1548..2435)
                     /locus_tag="VGQ24_04115"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HEV8454049.1"
                     /translation="MEYLEHLEKERDVSPHTVKAYARDLEAFTDFCDRHYGDWGWTTV
                     DRLGLRGFLGELQRRGLSKRSAARALSAVRSLYRYLQEHHGVPNSVVRAAKVPKLEKR
                     LPTYMDRSQTQSLFDWAESRAGGDEPGPTRDLAILELFYSTGIRLSELNGMNVEDLDL
                     LSDQVKVRGKGRKERIVPVGSRAVLALRRYLNLRESLVARIGGDRRAVFLSRRGKRLA
                     PRGIQRIVHGMFDAIGGDGLRVHSLRHTFATHMLDAGADLRAVQELLGHASLSTTQVY
                     THTSVERLKKVYNQAHPRA"
BASE COUNT          399 a          876 c          746 g          465 t
ORIGIN      
        1 tgtcctgcag ccactcggtg aagttgaagt cggtcccctc catcccgggc ggaggctgca
       61 tcatctcgaa catcggcggg ccctgctggg tgacctctat ctccagctcc cgctcttcca
      121 gttttccttc cttcagcaaa ccgcgaagct tctcgcgggt gcgattgcgc cgctcggtgg
      181 atgctttgtc ctccgccgaa ggctcctgct cactccgcgc ctcgccctga gacgaaacca
      241 cgaagcgcga gcgttccttc gaaggctcat catcccgtgg cttttggggc tcggctcccg
      301 gcaccagctc cgggccggac accagctccg ggccgggcgg gagcagcaaa tccagcagcc
      361 gttcttcggc acgggcctcg gccgtgggat agacctcgtc ctcccgctcg ccccgcacca
      421 tgttgatcgc ggagtcgacc aggtcgcgga ccatcgactc cacgtcgcgg cccacgtagc
      481 ccacttcggt gaacttcgac gcctcgacct tgatgaacgg cgcgcccgcg agccgggcca
      541 ggcgccgggc gatctcggtt ttgccgacgc ccgtcgggcc gatcatgatg atgttgttgg
      601 ggaggatctc gtcccggatg tcttccggcg cctgctgccg gcgccagcgg ttccgcaccg
      661 cgatggccac cgccttcttg gctgcctcct ggcccacgat gtagcggtcg agctcggcga
      721 cgatctggcg cggcggcatc tcctccagcc agggcatggg agccgtgggc tcggctgcct
      781 ctttggggat ggtgagctct ttggcgggtt cggacatact tgaaggtaag aggtgagagg
      841 taagaggtaa gaggtgagag agagacgaca gctttggctc tgtgctttcc ctctcacccc
      901 tcacttctca cctcttactt cttacttctc ccatcgcccg gcagttcgat aatcgtgatg
      961 ttccggttgg tgaagacgca gatgtcggcc gcgatctcca gggatcgctg ggtgatcttg
     1021 cgggccgtcc agtcgggctc ggacaggagg gcgcgcgcgg ccgcgagcgc gaagttcccg
     1081 cccgagccga tggcaacgat cccatcatcc ggctcgatca gctcgccggt accgctcagg
     1141 aggaagctgt ggtccaggtc ggccaccacc agcagggcct ccagccgccg gagcatccgg
     1201 tcgctccgcc agtccttggc cagctcgacc gcggctcgcg gcaggttgcc cggatagcgg
     1261 tccagcttct cctcgaactt ctcgtacaag gtgagcgcat cggccacgga gccggcaaaa
     1321 cccgccagca ccttgccccc cttcaacgcc cgcactttgc tcccctgcga cttgaacacg
     1381 gtctcaccca tgctcacctg cccgtcgccg cccagggcga cgcggccgtc tcttcgaacc
     1441 ccaagtatcg tggtgccgtg gaaatgcagc atgccggaga gatccttcgc tgcgctcagg
     1501 atgacacctc tacctctcac cctctcacct ctcacttctc acctggttca cgcccgcggg
     1561 tgcgcctggt tgtagacctt cttgagccgc tcgacactcg tgtgggtgta gacctgggtg
     1621 gtactgagag aggcgtggcc cagcagctcc tggacggcac ggagatcggc accggcgtcc
     1681 agcatgtgcg tggcgaatgt gtgccgcaac gaatgcaccc ggagcccatc gccaccgatc
     1741 gcgtcgaaca tgccatgcac gatgcgctgg atcccccgag gcgccagccg cttccctcgc
     1801 cggctcagga agacggcccg tcggtcgccc ccgatccggg caaccaacga ctcccggagg
     1861 ttaagatagc gccgcaaggc gagcaccgcc cgcgagccga ctggaacgat cctctccttc
     1921 cgtcccttgc cgcgaacctt cacctggtcc gagagcaggt cgaggtcctc gacgttcatg
     1981 ccgttcagct cggagagccg gatcccggtc gagtagaaca attccagaat ggcgaggtcc
     2041 cgagtgggac ccggctcgtc gccacccgcc cgtgactccg cccagtcgaa aagactctgg
     2101 gtctggctcc ggtccatata ggtcggcagc cgcttctcca gcttcggcac cttggctgcg
     2161 cggacgacgc tgttgggcac gccatgatgc tcctggaggt agcgatacag gctccgcact
     2221 gccgacaacg cccgcgcggc gctgcgcttc gacaatcccc gccgctgcag ctcgccgaga
     2281 aagccgcgca ggccgagccg gtccaccgta gtccagcccc agtccccgta atgccggtcg
     2341 cagaagtcgg tgaacgcctc gagatcccga gcgtacgcct tcaccgtatg cggtgagacg
     2401 tcgcgctcct tctccaagtg ctcaaggtat tccataactt cgtgatgttg agccattcag
     2461 ctccttaacg acttcaccac gaaggc
//
LOCUS       DASYRV010000165         3848 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1900847, whole genome shotgun sequence.
ACCESSION   DASYRV010000165 DASYRV010000000
VERSION     DASYRV010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3848
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1900847"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(15..173)
                     /locus_tag="VGQ24_04120"
     CDS             complement(15..173)
                     /locus_tag="VGQ24_04120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454050.1"
                     /translation="MLLIASTDPSPLVQTAVYMAGILGGYMLLVRPDEWQRAWETIRN
                     TWTKRPQD"
     gene            complement(180..2981)
                     /locus_tag="VGQ24_04125"
     CDS             complement(180..2981)
                     /locus_tag="VGQ24_04125"
                     /inference="COORDINATES: protein motif:HMM:NF027637.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent metalloprotease"
                     /protein_id="HEV8454051.1"
                     /translation="MSLSARWFLGVFFAGYSAISANAQQSPDSPSPARAAASAETTAV
                     IRTGRDAAIPQDDDRKDGPWKSFSEVTKGAQIQSGIFTIYRKRDNAYLALAPGQLDRD
                     YLLVTQLSQGIGELGLDGGASVRSDLVRFHRAGDRIELWVVNPHFVATPGTPMARAVA
                     YSFGHSVAQSFPIATMRDNGEILVDVAPFLLSDWADLGAFFQGVAVQRKLTGTFFLDK
                     DRSSLERLRLFPENMEAEVRLTYQANRNLGLEAVADYRWIPVGVHYSLLELPATPMRP
                     RYADERVGYFVSAIKDFSRDTAESFFVRFVNRWRLEKQNPGAALSEPVKPIVYYIDRT
                     VPTEWRPWVRAGILEWNRAFEEAGFRNAIQVLDAPEDTLWSAEDARYSTVRWTATNRS
                     VYAVGPSNVDPRTGEILNADVLVSASWIQTWRGESGEYVTPQVAVRSAFIEDSAASAM
                     NRESRLCSLGEGLRRQGTVTRALFAAGGDKPEAASSIRLYIGQALKALIMHEVGHTLG
                     LRHNFRGSAGVTRAQLTDRSYTKANGLGVSVMDYNPPALSLDPKKQGDFYAPTIGSYD
                     RWAVRYGYTPLGPSEPVFTLAKGSEGLASSWTPDAEAKALQSIAAEAADPSHLYGTDE
                     DAGFGGLGLDPTVSRYDQTDDPLGWARERVTLINGLFDSLDTRMVAPGQGYARLRSTF
                     ADLLTDRWYALLVTTKYLGGAMTARDHRGDPAARPAFVTVPATVQREALRFIIEAGFG
                     EKAYRFPPALLSRLGPDRWRHWGSNPGSDGRIDFPLHDWATTHQSSLLGQLLDPVVLE
                     RIRDAELRATESEPTVTIPELFATLTAAIWAEIGYPGPGGQPNLPRNVASVRRDLQRL
                     YLNSLVRMMVNPLPDTPEDARTLARATLADLATGLDRAMARRTIELDSYTRAHLVDSR
                     ERITQALNAQMFQNTGMTR"
     gene            3277..3768
                     /locus_tag="VGQ24_04130"
     CDS             3277..3768
                     /locus_tag="VGQ24_04130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454052.1"
                     /translation="MTQRSAAATEVARRIWQRAVGDSSAPEDVAVAATRMCAELRAGL
                     SRWVGAMGYRALIDRALLLARAEHPALGSLSCHGEDEPASTAAVQAHTAAEVATGMVA
                     LVAALVELLGRIIGEEMAVRLVEQTGIKDGRETGRPRDRERPSLRGFVSTESRGERDA
                     GGG"
BASE COUNT          665 a         1190 c         1357 g          636 t
ORIGIN      
        1 gacacgcagg gaattcagtc ttgcgggcgc tttgtccacg tgttgcggat ggtttcccag
       61 gctcgttgcc attcgtccgg ccgcaccagg agcatgtagc cgccgagtat gcccgccatg
      121 tagacggcgg tctggaccag cggagaggga tcggtagaag cgatcaagag catggtcgat
      181 tacctcgtca ttccggtgtt ctgaaacatt tgggcgttga gggcctgggt gatccgctct
      241 ctcgaatcca ccaggtgggc acgggtatag gagtccagct cgatagtgcg ccgggccatt
      301 gcccggtcca gcccggtcgc gaggtccgcc agcgtggccc gggccagcgt gcgcgcatcc
      361 tccggggtgt cgggcagtgg attcaccatc atccggacca ggctgttcag atagaggcgc
      421 tgcaggtcac gccggacgga cgccacgttg cggggcaggt ttggctgccc accagggccg
      481 ggatatccga tctcggccca gatcgcggcg gtgagcgtgg cgaacaactc cgggatcgtg
      541 accgtcggct cgctctccgt cgcgcgcagc tctgcgtccc gaatgcgctc cagcactacc
      601 gggtcgagca gctggccgag gagactggac tggtgcgtcg tcgcccagtc atggagggga
      661 aaatcgatcc gcccgtcgga gccgggattc gatccccagt gccgccagcg atccggcccc
      721 aggcggctca acagcgcggg cgggaaacga taggccttct ccccgaaccc ggcttcgatg
      781 atgaacctga gcgcctcgcg ctgaacggtt gccgggacgg tcacgaaggc aggccgtgca
      841 gccgggtctc cccggtggtc gcgagccgtc attgcgccgc ccaggtactt ggtcgtgacg
      901 agcagcgcgt accaacggtc cgtcaagaga tcggcaaagg tcgaacgcag gcgagcgtat
      961 ccctgtcccg gagccaccat cctggtgtcg agcgaatcga acaacccgtt gatcagggtg
     1021 acccgctcgc gggcccatcc gagtggatca tcggtctgat cgtagcgcga cacggtggga
     1081 tcgagcccga gccccccgaa gccggcgtcc tcatcggtgc cgtagaggtg cgagggatcg
     1141 gcggcctcag ccgcgatgct ctggagcgcc ttggcctcgg cgtcgggagt ccaggaagag
     1201 gcgagccctt ccgagccctt cgccagggtg aaaacgggct cgctgggacc gagtggggtg
     1261 tagccgtagc gtaccgccca gcggtcgtag gagccgatcg tcggagcgta gaagtccccc
     1321 tgcttcttcg ggtcgagcga gagtgcgggc ggattgtagt ccatcaccga cacgccgagc
     1381 ccgttcgcct tggtatacga ccgatcggtc agctgggcgc gagtcacccc ggctgagcca
     1441 cggaagttgt ggcggaggcc gagggtatgt cccacctcat gcatgatgag cgccttgagc
     1501 gcctgaccga tgtacagccg gattgaggag gcggcctccg gcttgtcgcc tcccgccgcg
     1561 aacagcgccc gggtcaccgt gccctgacgc cgcagacctt ctcccaggct gcaaaggcga
     1621 ctctctcggt tcatggcgct tgcggctgag tcctcgatga aggcggagcg caccgccacc
     1681 tggggcgtca cgtactcgcc ggactcaccg cgccaggtct gaatccacga cgcggagacc
     1741 agcacgtcgg cgttcaggat ctcgccggtg cggggatcca cgttcgacgg gccgacggca
     1801 tagacgctgc gattggtggc ggtccaacgc acggtcgagt agcgggcgtc ctccgcgctc
     1861 cagagcgtgt cctccggcgc gtcgagaact tgaatcgcat tgcggaagcc ggcctcctcg
     1921 aaggcgcggt tccattccag aatacccgcc cgcacccacg gcctccactc ggtcggtacg
     1981 gtccgatcga tgtagtagac gatcggcttg acgggctcgc tcagcgcggc acctgggttc
     2041 tgcttctcca gccgccagcg gttcacgaag cgaacaaaga agctctcggc ggtatcccgc
     2101 gagaagtcct tgatcgcgga cacgaaataa cccacccgct cgtcggcgta gcggggtcgc
     2161 attggagtgg ctggcagctc gaggagggaa taatgaaccc ccaccgggat ccagcggtag
     2221 tccgcgacgg cctcgagtcc cagattgcgg ttggcctgat aggtgagccg gacctcggct
     2281 tccatgttct cagggaagag gcggaggcgc tcgaggctgg agcgatcctt atcgaggaag
     2341 aacgtgccgg tgagcttccg ctgaacggcg acgccctgga agaaggcgcc gagatcggcc
     2401 caatcggaga gcaggaacgg tgcgacatcg accaggatct cgccgttgtc gcgcatggtg
     2461 gcgatgggga acgactgcgc gacggagtga ccgaacgaat aggcaacggc ccgagccatc
     2521 ggtgttcctg gcgtcgcgac gaagtgaggg ttcaccaccc agagctcgat ccggtcgccg
     2581 gcccggtgga atcggaccag atcggatcgc accgaggcgc ctccatcgag gccgagctca
     2641 ccgatcccct gggacagctg ggtgacgagc aggtagtccc ggtcgagctg ccccggcgcc
     2701 agcgccaggt aggcgttgtc ccgtttccgg tagatggtga agatgccgct ctggatctgg
     2761 gcgcccttgg tcacctcgga gaaggacttc cagggcccat cttttcggtc gtcatcctgc
     2821 gggatcgcgg catcccgtcc cgttcggatg accgcggtcg tctccgccga tgcagccgcg
     2881 cgtgcgggac tcggcgagtc cggagactgc tgtgcgttgg cgctgatggc gctgtacccg
     2941 gcgaaaaaca cgccgaggaa ccatcgagct gatagggaca cggcgactcc ggacgacaga
     3001 agacgagagt gaagcggccc gcggtgggga ccaggtctga gccggggagg ggcaagttgg
     3061 gggccgctat cgaagtgacg gtaaatggag ggtttgcgag cccttgacct ttcaaaaagc
     3121 cagccccggg ggcaaaaagc ggcggggagc ggtctacccg ccttcagcgg ggtcggggtt
     3181 cgccctcctt gtgtttggat ggcaactcac catttttggg ggccctcgtg actccctcct
     3241 tcctccgccc cctagctccg gcgcgcggga gcgttaatga cgcaaagatc tgcggccgcg
     3301 actgaagtgg cgcggcgcat ctggcagcgc gccgtcggcg actccagcgc gcccgaggat
     3361 gtcgcagtgg ctgcgacccg catgtgtgcg gagctccgtg cggggctcag ccgctgggtc
     3421 ggagccatgg gctatcgcgc gctcatcgat cgagcgctgc tgctggcgcg ggcggagcat
     3481 ccagcgctcg gcagtctgtc gtgccacgga gaagacgagc cggcgtccac tgctgccgtg
     3541 caggcacata ctgccgccga ggtggcgacc ggcatggtgg cgttggtggc cgcgttggtc
     3601 gagttgctgg ggcgcatcat cggagaagag atggcggtgc gtttggtgga gcagactggc
     3661 ataaaggatg ggagagagac cgggagaccg agagaccgag aaagaccgag cctgcgcgga
     3721 ttcgtgagca ctgagtcgag gggagagcgc gatgccggcg gtggctaaga agcattcccg
     3781 aaaacaggcg agacccgaac gtccggtgct ggagctcctg gataccgggg tgcccgggct
     3841 gaacgacg
//
LOCUS       DASYRV010000166         4838 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2733686, whole genome shotgun sequence.
ACCESSION   DASYRV010000166 DASYRV010000000
VERSION     DASYRV010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4838
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2733686"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1125)
                     /locus_tag="VGQ24_04135"
     CDS             complement(<1..1125)
                     /locus_tag="VGQ24_04135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HEV8454053.1"
                     /translation="MSRPGWSRLSLTHWIFIGMAAGILLGWLAPGTAAQLKPLSTVFL
                     RMIKSVVVPIIFGTLVIGIAGHGDDLKRIGRLFIKSMAYFWAMTTIALAIGLIAVHLT
                     KPGIGVVLPPVDPHAALPTPAPTSISGFLEHIVPRSFFEAAANNEVLQVVFWATLFGI
                     ALSQVRGKPKEAMLGFCEGLAQVMFRFVGIVMKFAPVGIGAAMAVTVSHSGIAVLRNL
                     GLLVATLYGALIVFALVGLLPVALLTRIPIKRFIRQVKDPAIIAFTTTSSDAALPLAM
                     ERMIEFGVPRRIVAFVMPTGYSFNLDGSTLYLGVASIFVAQAAGVHLSLGEQLAMMLT
                     LLITSKGIAAVPRASLVVLAGVLTTFGLPLEGVAVILGVDE"
     gene            complement(1122..2207)
                     /gene="tal"
                     /locus_tag="VGQ24_04140"
     CDS             complement(1122..2207)
                     /gene="tal"
                     /locus_tag="VGQ24_04140"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF002881.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEV8454054.1"
                     /translation="MARLGELGQSIWYDYITRDLLASGELARLIASDGLRGMTSNPTI
                     FDKAVAGSRLYDADIRRLADGGASAGEIFEALAVADVRAACDAFLPLYERSGRGDGLV
                     SLEVSPTLAHDADATVHEAERLWSALSRPNAMIKIPGTRAGLPAITRCIGAGINVNVT
                     LLFSVERYAEVIEAFLSGMEQRLERRLPIGSVVSVASFFVSRVDGKIDPLLDQTAGGA
                     PLRGQAAIANAGMAYRRFEETLRQQRWRRLAQSGAHPQRPLWASTSTKDPRYPDTYYV
                     DALVAPQTVNTLPPETLEAYRDHGNPEVRIHDRAAAAPAQLEALARAGIDLARVTHEL
                     EVEGVEKFAASYRSLLGAIDAKIGQLV"
     gene            complement(2213..4222)
                     /gene="tkt"
                     /locus_tag="VGQ24_04145"
     CDS             complement(2213..4222)
                     /gene="tkt"
                     /locus_tag="VGQ24_04145"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEV8454055.1"
                     /translation="MAWRSINAIRALSMDAVEQAQSGHPGTPMALAPAAYVLWSRFLR
                     HNPRNPEWPDRDRFVLSCGHASMLLYSLLYLSGYDLTLEEIRNFRQWGSRTPGHPERG
                     HTPGVETTTGPLGQGFANAVGMAIAERLLADHFNRPDHTIVDHRVWAFASDGDLMEGV
                     ASEAASIAGHLRLGKLTVVYDDNHITIDGDTALTFSEDVSRRFEAYGWHVLKVGDGND
                     LAALAAAFESARAETTRPSLVVLRTVIADPAPTKRNTAEAHGAPLGAEEVRRTKEIIG
                     WPLEPRFFVPDDALAHWRGAVARGAELEASWRKHFDSYASAHPALAAELQLWLSGELP
                     DGWDRELPVVTPASGALATRQASGLALQVIASAIPNLVGGSADLGGSTGTTLKQGGVF
                     GPASTGRTFHWGVREHGMAACLSGIAAHGGLRPFGSTFLIFSDYMKPAIRLAAIMRLP
                     VIYIGTHDSIGLGEDGPTHQPVEHLAMLRAIPNLVTLRPADATETIEAWRIAIERREG
                     PTMLVLSRQKLPVLDRNSLGAVEGVRQGAYVLLDPPGSSGSLDAILIATGSEVVVALD
                     AARQLHAAGVWVRVVSMPSWELFAAQPGSYRDQVLPPAVRSRVAVEAAGPMGWARWIT
                     DDGVMLGMEGFGASAPGERLFQEFKLTPDHISQTVKRLLAERGAT"
     gene            complement(4381..4809)
                     /locus_tag="VGQ24_04150"
     CDS             complement(4381..4809)
                     /locus_tag="VGQ24_04150"
                     /inference="COORDINATES: protein motif:HMM:NF018942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEV8454056.1"
                     /translation="MRRLLPYNPDLARLVLRLALAAVLLYHGIPKLMDFGATAVGFEG
                     LGLPAPPVTAVIALLAEVGGGLLILLGLAVDIAGLLVIIDMLGAIVLVHWANGFDFTK
                     GGWEHPFTVLAMALTLALAGPGRLTVGKQHYQGAERRRRG"
BASE COUNT          904 a         1596 c         1584 g          754 t
ORIGIN      
        1 ctcatccacg cccagaatca cggcgacacc ctcgaggggc aaaccgaacg tcgtgagaac
       61 cccggcgagc accacgagcg aggcccgggg caccgccgca atgcccttgc tggtgatgag
      121 cagcgtcagc atcatggcca actgctctcc cagggagagg tggacgcccg cggcctgcgc
      181 cacgaagatc gacgcgacgc cgagatagag tgtcgagccg tccagattga acgagtaccc
      241 tgtcggcatc acgaaggcga cgatccgccg gggaacgccg aactcgatca tccgctccat
      301 cgcgagcggc aacgcggcat cagacgatgt agtggtgaac gcgatgatcg caggatcttt
      361 gacctggcgg atgaagcgct tgatcggaat acgggtgagg agggccaccg gcagcagccc
      421 gaccaacgcg aaaacaatga gcgcgccata caacgtggca acgagcaacc ccaggttcct
      481 gaggacggcg atcccactgt ggctgaccgt gaccgccata gcggcgccga tgcctaccgg
      541 ggcgaacttc atcacgatgc cgacaaagcg gaacatcacc tgggccaggc cttcacagaa
      601 gccgagcatg gcctccttgg gcttgccccg cacctgactg agcgcaatgc cgaagagggt
      661 ggcccagaag actacctgga gcacctcgtt attggccgcg gcctcgaaaa agctccgggg
      721 cacaatgtgc tccaggaagc cgctgatgga ggttggggcc ggggtgggaa gcgccgcatg
      781 gggatcgaca ggcggcagca ccacgccgat gccaggtttg gtgaggtgga ccgcgatgag
      841 tcctatggcc aacgcgatcg tcgtcatggc ccagaagtag gccatcgatt tgatgaacag
      901 cctgccgatt cgcttcagat cgtccccatg ccccgcgatc ccgatcacca gcgtcccgaa
      961 aatgatgggg acgacgaccg actttatcat tcggaggaag acggtcgaga gcggcttcag
     1021 ctgggccgcg gtgccggggg ccagccagcc caacaggata ccggccgcca tcccgatgaa
     1081 gatccagtgg gtgagggaga ggcgcgacca gcccggccgg ctcataccag ctggccgatc
     1141 ttggcgtcga tcgcgcccag gagcgagcgg tacgaggcgg cgaacttctc caccccctcg
     1201 acctccaact catgggtgac tctggccagg tcgattcccg cgcgcgccag cgcctccagc
     1261 tgtgccggtg ccgcggccgc ccgatcgtgg atccgcacct ccgggttccc atggtcgcga
     1321 taggcctcga gcgtctcggg cggcagcgta ttcaccgtct ggggcgcgac cagtgcgtcg
     1381 acgtagtagg tatcgggata gcgcgggtcc ttcgtactag tcgaagccca gagcgggcgc
     1441 tgggggtgag ccccggactg ggcaagacgc ctccaacgct gctgccgcag agtctcctcg
     1501 aaccggcggt aggccatgcc cgcattggcg atggcggcct ggccgcgcag cggggcgccg
     1561 ccggcggtct ggtccaagag cggatcgatt ttcccgtcca cccggctcac gaagaagctg
     1621 gccaccgaga ccaccgatcc gattggtaac ctccgctcga ggcgctgctc catcccggag
     1681 aggaacgcct cgatcacttc ggcatatcgt tcgaccgaaa acagcagggt gacgttcacg
     1741 ttgatgccgg ctccgatgca gcgggtgatc gccggcagcc cggctcgagt tcccggaatc
     1801 ttgatcatcg cgttgggccg actcagcgcg ctccagagac gttccgcctc atgcaccgtg
     1861 gcatcggcat cgtgggccag tgtcggtgag acctccagtg acaccagtcc atcccctcgg
     1921 ccggagcgct catagagcgg caggaacgca tcgcacgccg ccctgacgtc ggccaccgcc
     1981 agcgcctcga agatctcacc cgcgcttgcc ccaccgtccg ccagacggcg gatgtctgca
     2041 tcgtaaagcc ggcttcccgc caccgccttg tcgaagatgg tcgggttgga ggtcatcccg
     2101 cggagcccgt cggacgcgat gagccgggcg agctcgcccg atgccagcag atccctggtg
     2161 atgtagtcgt accagatgct ctgacccagc tctcccaatc tggccaatgg gttcacgtgg
     2221 ccccccgttc agccagaagc cgcttcaccg tctgggagat gtggtccgga gtaagcttga
     2281 actcctgaaa caatcgctcc cccggagccg aggcgccgaa gccttccatt cccagcatta
     2341 caccgtcgtc cgtgatccag cgagcccatc ccattgggcc ggctgcctcc accgccaccc
     2401 tggatcgcac cgccggcggc aagacctggt cccggtatga ccccggttgg gccgcaaaga
     2461 gctcccagga cggcatcgac acgacccgca cccacacccc cgccgcatgc agctggcgcg
     2521 cggcgtcgag cgcaacgact acctcggatc cggtggcaat cagaatcgcg tcaagcgagc
     2581 cagaggagcc gggtggatcg agcagcacgt atgcgccctg ccgcacccct tctacggcgc
     2641 ccagggagtt tcgatcgaga accggcagtt tctgacggga aagaaccagc attgtaggcc
     2701 cttcccggcg ttcgatggct atccgccagg cctctattgt ctccgtggca tcggctggac
     2761 ggagggtcac cagattggga atggctctga gcatggccag gtgctcgaca ggctgatggg
     2821 tgggaccgtc ttcccccagg ccaatcgagt cgtgggtgcc gatgtagatc accggcagcc
     2881 gcatgatggc tgcgaggcgg atcgccggct tcatataatc ggagaaaatc aggaaggtgc
     2941 tgccgaatgg acggaggcca ccatgcgcgg caataccgct gagacacgcg gccattccgt
     3001 gctcccgtac tccccagtgg aaggtgcgtc cggtggacgc cggtccgaac accccaccct
     3061 gcttgagagt ggtaccggtg ctgcccccga ggtcagccga gccgccgacg agattgggaa
     3121 tcgcggaagc gatgacctgc agggccaagc cagacgcctg ccgggtcgcc agcgctcctg
     3181 aggccggggt gaccaccggc agctcgcgat cccatccatc cggcagctcc ccggacaacc
     3241 agagctggag ctcggcggcc agcgcgggat gagcgctcgc gtagctgtcg aagtgcttcc
     3301 gccaggacgc ctcgagctcc gcaccccgag cgacggctcc acgccaatgg gccagcgcat
     3361 cgtccggcac gaagaacctg ggctccaggg gccagcctat gatctccttg gtgcgtcgca
     3421 cctcctccgc gcccagcggt gcaccgtggg cctctgccgt gttgcgtttg gtgggcgccg
     3481 gatcggcaat gacggtgcgc agcaccacca gagacggacg ggtagtctcg gcacgagcgg
     3541 actcgaacgc tgcggccaag gcggcgaggt cattgccgtc acccaccttc agaacatgcc
     3601 agccgtaagc ctcgaacctg cggctcacat cctccgagaa ggtgagagcg gtgtcgccgt
     3661 cgatggtgat gtggttgtcg tcatagacca cggtgagctt gcccaggcgc aggtgtcccg
     3721 caatcgaggc agcctcactg gctaccccct ccatgagatc gccgtcgctg gcgaatgccc
     3781 atacccgatg atccacgatc gtgtggtcgg gccggttgaa gtgatcggcg agaagccgct
     3841 ccgcgatggc catcccgacg gcgttggcga acccctgtcc cagtgggccg gttgtcgtct
     3901 ccacacccgg ggtatgcccg cgctcgggat ggccgggcgt gcgggatccc cactgccgga
     3961 agttcctgat ttcttccagc gtgaggtcgt acccactcag gtacagcagg gagtagagca
     4021 gcatcgaggc gtgcccgcag gaaagcacga accgatcgcg gtcgggccac tcggggttac
     4081 gcgggttatg acggagaaaa cggctccaaa gcacgtatgc ggcgggagca agggccattg
     4141 gcgtgccagg gtgtccggac tgggcctgct ccaccgcatc catcgagagg gcgcgaatcg
     4201 cgttgatgct ccgccaggcc aattcggacc gcgcttcagc ctcgcgggtg gacgggatcg
     4261 ggtccggacg cgccgttcga gcgcgggtgc tctctgcgtt caggacgagc tcctttcggg
     4321 cgtgggatcg ggccgcgggt gggtggattg gggaagataa cgatttaatg tctccccccg
     4381 tcaaccgcgc cgtcgccgct ccgcgccctg gtaatgctgc ttcccgactg tgagccggcc
     4441 cgggccggcg agagccagcg tcaaagccat ggcgagaaca gtaaagggat gctcccaacc
     4501 gcctttcgtg aaatcgaagc cattggccca gtgcaccagg acgatcgcgc cgagcatgtc
     4561 gatgatcacg aggagtccgg caatatcgac cgccagccct aagaggatga ggagcccgcc
     4621 gcccacctca gcgaggaggg caatgacggc ggtgactggc ggcgcgggca agcccaggcc
     4681 ttcgaagcca accgcagtgg cgccgaaatc catcagcttc gggatcccgt ggtacaggag
     4741 aaccgccgcc agcgcgaggc ggaggaccag ccgcgcaagg tcgggattat acgggagcaa
     4801 gcggcgcatg ggaggtcctt gccgaggtgg tcaccttg
//
LOCUS       DASYRV010000167         3187 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_894471, whole genome shotgun sequence.
ACCESSION   DASYRV010000167 DASYRV010000000
VERSION     DASYRV010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3187
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_894471"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..282
                     /locus_tag="VGQ24_04155"
     CDS             <1..282
                     /locus_tag="VGQ24_04155"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEV8454057.1"
                     /translation="GTFDLYWIVVAAESQGHGVGSALLAEIERRVAGRARLIVVETAG
                     REQYAGTRRFYEARGYSVGARIPDYYEVGDDLVTYVKEVAGGRSQVADR"
     gene            343..1467
                     /locus_tag="VGQ24_04160"
     CDS             343..1467
                     /locus_tag="VGQ24_04160"
                     /inference="COORDINATES: protein motif:HMM:TIGR00238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KamA family radical SAM protein"
                     /protein_id="HEV8454058.1"
                     /translation="MSTWQEVLKQRSITSLDALAERFGAEHFPPEHHERLRQAIDNFE
                     FRISPPMVDLIQSPDDPIWRQYIPTLQELEVVDGIVDSLSEDRDSPVPNITHRYPDRA
                     LFLVSPVCASYCRFCTRRRKVGDPEKIPMSQFESAFQYLEAHPEIRDVIMSGGDPLML
                     SDRRLEVILTRLRAIKHIEIVRIGSRVPCHLPERITPELCTMLRQFHPLFINTHFNHP
                     DELTPAAVHGLGMLADAGIPLGCQTVLLRGVNDTPEVMVKLMQRLLMARVRPYYIYMA
                     DQVAGAEHFRTTIQTGLEIMKALRGWTSGLANPHFVIDAPGGGGKVPLLPEYVESISE
                     DEVVFRNFKGERYVYRQPHGPAAPRLRVADPEYLLEPTVQ"
     gene            complement(1469..>3187)
                     /locus_tag="VGQ24_04165"
     CDS             complement(1469..>3187)
                     /locus_tag="VGQ24_04165"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEV8454059.1"
                     /translation="IGLEAGNRSALALHARFGGTWEGTGLLLDVSRRQGEGARENVGS
                     LRSDATLKTVVPLGRDQSLLFKASYYAERSRVTYSGLTETEWAAAPRQNPFRNDSMLL
                     DRTAAAATHRAWLGAGVALTTTAYAYRIGRDWWRQASNSAERPNDASDPDCAGMANLN
                     TTCGNQGRLRDYAVTGLEPRLQLEGTSLGLTHQIELGVRVHHESQDRRQVNGDFPAAR
                     TVGSATDANSGIVEDNLRRNTAYSGFLQHRVLAGRWSVTPGLRIEHVRYDRVNRRPVP
                     TNPEGIRGRTSLTQLIPGIGATFAASAGTTFFAGMHRGFAPPRTEDLISNSTGGIVEL
                     DSELSWNYEAGVRSQPATGLSLEATAFRMAFSNQIIPASIAGGTGAALTSAGRTLHQG
                     LELAGSLGTASLLGWRHDLSVNVSYTWLPTVRFEGERFSFVGQGAGDVIGKVYADQNA
                     AGTRQRVRVTGNRLPYAPEHLLTASLGWVAPQGFDFSLEAVHLGQQFGDPLNTLITVP
                     DGQQGLLPAATIWNLAANYNLPGLQTALFVTLKNATDKLYIVDRTRGLLPGAPRLVQV
                     GATTSF"
BASE COUNT          555 a         1035 c         1031 g          566 t
ORIGIN      
        1 ggaacctttg acctctactg gatcgtcgtc gccgccgaat cgcaggggca cggggtgggg
       61 agcgctctgc tagcggaaat agagcgacgc gtggctggcc gggcccggct catcgtggtg
      121 gagacggccg gccgcgagca gtatgctgga acccggcgct tttatgaagc ccgcggctac
      181 tcggtcgggg cgcggattcc ggactattat gaggtggggg acgacctggt cacctacgtt
      241 aaggaggttg caggtggcag gtcgcaggtg gcagataggt agcaggtgat gacctgccag
      301 ccacctgcca cccgccacct gccacccgcc acctgagctc ccatgtccac ctggcaggaa
      361 gtgctcaagc agcgctccat cacgagcctc gacgccctcg ccgagcggtt cggagccgag
      421 catttcccgc cggagcacca cgagcggctt cgccaggcca tcgacaactt cgagttccgg
      481 atttcaccgc cgatggtcga tctcatccag tctccggatg atcccatctg gcgccagtac
      541 atccccacgc tgcaggagct cgaagtcgtc gacgggatcg tcgactcgct ctccgaggat
      601 cgcgacagtc cggtccccaa catcacccat cgctatcccg atcgggcgct cttcctggtc
      661 tctccggtct gcgccagtta ttgccggttt tgcacgcggc ggcgcaaggt gggcgatccg
      721 gagaagatcc cgatgtcgca gttcgagtcg gcctttcagt atctcgaggc gcaccccgag
      781 atccgggacg tgatcatgtc gggaggggat cccctgatgc tctccgaccg ccgcctcgag
      841 gtcatcctca cccggcttcg cgccattaag cacatcgaga tcgtccggat cggaagccgg
      901 gtgccgtgtc atctgccgga gcggatcacg ccggagctct gcaccatgct acggcaattt
      961 catccgctct tcatcaatac gcacttcaat catcccgacg agctgacgcc ggccgcagtg
     1021 cacgggctgg gcatgctggc cgacgcgggc attccgctgg ggtgtcagac ggtactgctg
     1081 cgcggcgtga acgacacccc ggaagtgatg gtcaagctga tgcagcggct gctgatggca
     1141 cgggtgcggc cctactacat ctacatggcc gatcaggtcg ccggtgccga gcacttccgc
     1201 accacgatcc agacggggct cgagatcatg aaggcgctgc gcggctggac cagcgggctc
     1261 gcgaatcccc atttcgtgat cgacgcgccc ggcggcgggg gcaaggtgcc gctgctgccg
     1321 gagtacgtgg aaagcatcag cgaggacgag gtggtcttcc gcaatttcaa aggggagcgc
     1381 tacgtctatc gtcagccaca cgggcccgcc gcgccgcggc tgcgcgtggc ggatcccgag
     1441 tatcttctgg aaccaacagt acagtagcct aaaagctggt cgttgcccct acctgtacca
     1501 gccgcggtgc tccaggcagt aatccacggg tcctgtccac gatatacaac ttgtccgtcg
     1561 cattcttcag ggtgacgaac agcgcggtct gcagtcccgg aagattgtag ttcgccgcga
     1621 gattccagat ggttgctgca gggagcagcc cctgttgtcc atcgggaacc gtaatcaagg
     1681 tgttgagcgg atcgccgaac tgctgtccga ggtgtaccgc ctccagcgaa aagtcgaacc
     1741 cctgaggggc tacccagccg agcgacgcgg tgagaagatg ctcgggggcg taaggcagcc
     1801 ggttccccgt gacgcgcacc cgctggcggg tacccgccgc gttctggtcc gcgtacacct
     1861 tgccgatgac atcgccggcg ccctgcccga cgaaggagaa ccgctcgccc tcgaagcgga
     1921 cggtcgggag ccaggtatag ctcacgttca cactgagatc gtgcctccag ccgagcagcg
     1981 acgccgtccc cagcgatccg gcgagctcga ggccctgatg cagagtgcgc ccggcgctgg
     2041 tgagtgcggc tccggttccg ccggcgatgc tggccggaat gatctgattg ctgaaggcca
     2101 tccggaaggc ggtcgcctcg agcgagagac cggttgcagg ctggctccgg acgccggctt
     2161 cgtaattcca gctcagctcc gaatcgagct ccacgattcc tcccgtggaa ttgctgatca
     2221 agtcctcggt gcgcggtggg gcaaacccgc ggtgcatacc cgcgaagaag gtggttcccg
     2281 cggaagccgc gaacgtcgcc ccaatcccgg gaatcagctg cgtgagagaa gtgcgccccc
     2341 gtatcccttc cggattggtg gggaccggcc tgcgattcac ccggtcgtac cgcacgtgct
     2401 cgatccgaag acctggagta acgctccagc gaccggccag gacgcggtgc tggagaaacc
     2461 cggagtaggc ggtattgcgg cgaagattat cctcaacgat ccccgaattc gcgtccgtcg
     2521 ctgagccgac ggttcgggcg gcggggaaat cgccgtttac ctgccgacgg tcctgactct
     2581 catgatggac tcgaactccc agctcgatct gatgggtcag tccgagcgag gtaccctcga
     2641 gctggagcct tggttcgagt cccgtgacgg cgtaatcacg gagccggccc tggttgccgc
     2701 aggtcgtatt caggtttgcc atcccggcgc agtccgggtc gctggcgtcg ttgggccgct
     2761 cggcggaatt gctcgcctgg cgccaccagt cacgcccaat gcgatacgcg taggcggttg
     2821 tggtgagcgc aacgccagcc ccgagccagg cacgatgggt cgctgcggcg gccgtacggt
     2881 caagtagcat cgagtcgttg cggaagggat tctggcgtgg tgctgcggcc cactccgtct
     2941 ccgtgagacc ggagtaagtc actcgcgatc gctcggcgta gtagctggcc ttgaaaagca
     3001 atgattgatc gcggccaagc ggtaccaccg tcttgagcgt cgcatccgag cgcagcgaac
     3061 ccacgttctc ccgggctccc tcgccctgac gccgggagac gtcgagcagc agcccggtcc
     3121 cctcccaggt cccgccgaag cgagcgtgca gcgcaagcgc gctccggttc cctgcttcga
     3181 gaccaat
//
LOCUS       DASYRV010000168         6356 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_895546, whole genome shotgun sequence.
ACCESSION   DASYRV010000168 DASYRV010000000
VERSION     DASYRV010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6356
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_895546"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(58..897)
                     /locus_tag="VGQ24_04170"
     CDS             complement(58..897)
                     /locus_tag="VGQ24_04170"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEV8454060.1"
                     /translation="MPVAPQESLRVTIAGSGETVVLVPGLFGSAFGYRHLLVMLPAAG
                     FRTIVIEPLGIGRSPRPKRADYSLTAQADRLDAVLESLEEPPAIVVGHSLGASMVLRL
                     AYRHPGRVRALIALDGGPAERAATPGLRRAMRYAPWVKWLGGIKRIRPQMRKGLIAAS
                     GNASWVTDQVMDGYTAGARADLDGTLLAFIAMAEAREPERISPHLTEIRCPVRLIIGT
                     APHEGGVEPKQIQLLRDRLPDFSLDSITGAGQYLFEEQPSSVVEVIRQVGPTRTASAE
                     SVH"
     gene            1145..3769
                     /locus_tag="VGQ24_04175"
     CDS             1145..3769
                     /locus_tag="VGQ24_04175"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HEV8454061.1"
                     /translation="MIQFHTLGRLDLRGPDGVELRSVLQQPKRLGLLAYLTVASPRRF
                     HRRDTLLGLFWPELDQEHARAALRRALYFLRAQLGPDVVAGRGDDEVGVPEEALWCDA
                     TALERALDEGAPEQAVGLYRGTFLEGLYVAGAAAEYQEWLERERTRLRAGATTAARSV
                     ADQREAEGRLADAAQWCRRALELSPDDESAVRRLLTLLDHIGDRSAALRVYDEFARRM
                     TQEFELEPSVETRQLVETIRRRPVSAPRREATPPAAQPDLTARLAVLPFSVRGDARLA
                     YLREGMVDLLATRLDGAGELRPVDHRAVLRFLSHDQPVPIPGPAVAAHFEAGSYLEGS
                     IVEAGGRLQAGASLYSLDGQVLASASATAGSEGEIFELVDELARQLLAARGGTSGTRL
                     TRLAGLTTTSLEALKCYLLGERELRAGRYFDALEAFQAAIDADPSFALAYYRLAASAA
                     GCALPDLARELADRGFEYRQRLSLRDQLVFTAQRAWLHGAVDEAESLYNTIIGTYPDD
                     LEAWFHLGDLLFHSNPLRGRSSVEAREPLERVLRLEPDHVGAMVHLVRVSAIEGRKGE
                     TLDLIERILRASPDGDQALAMRALRAYTTGDRTAIEQVSAELHRARAVTVAIAFSDVA
                     LYSGDLAGAEHLARSFIQVARSPELRSLCHALVAHVALAGGRDDLARAQLELAESLDR
                     TWGLEMRALFSILPFRPVSEAELRDLRRTLEDWDPAGVAPSMFLIFAMHNDLHPALRV
                     YLLGLIDLRLGDVASAVEQAELLEALAGPAEGLVASLLVELQAAIARAEGRPEDALRI
                     LERSHPRLWFQLTVASPFFSLASQRYLRAELLRGVGRLEEAAGWYRSIAERSPYELIY
                     AGPAQRRLSEMGDLALSR"
     gene            complement(3759..4745)
                     /locus_tag="VGQ24_04180"
     CDS             complement(3759..4745)
                     /locus_tag="VGQ24_04180"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEV8454062.1"
                     /translation="MQSRALGRQGLRVSALGLGCMGMSEFYTGRNDAESIATIQRALD
                     LEINFLDTADMYGPFTNERLVGKAIRGRRHEVVLATKFGNERGEDGSFLGVNGRPEYV
                     RKSCDGSLQRLGIDHIDLYYQHRVDRTVPIEETVGAMADLVREGKVRYLGLSEAAPVT
                     IRRANEEHPISALQTEYSLWTRDPEDEVLPLCRELGIGFVAYSPLGRGFLTGRFRTFE
                     DLPEDDYRRNSPRFQGENFQKNLDLVERAEEIAGRKQCTPAQLALAWLLAQGEDIVPI
                     PGTKQRRYLEENVGALDVELTGADLEEILEVAPKGAAVGDRYNEAAMRTING"
     gene            4885..5466
                     /locus_tag="VGQ24_04185"
     CDS             4885..5466
                     /locus_tag="VGQ24_04185"
                     /inference="COORDINATES: protein motif:HMM:TIGR00730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HEV8454063.1"
                     /translation="MNRICVFCGTNPGSRPEYGAAARELGQILAEQGIELVYGGASVG
                     IMGELADSVHEHGGHVTGIIPQQLMEKEAAHTGIPNLIVVASMHQRKSQMADMSDGFI
                     ALPGGIGTLEGFLEILTWGQLGIHAKPSGILNVAGYFDGLIRFLDHAVQEGFLTEEHR
                     GAIIMESDPRRLLEHMQASTPPDSEKLMGRTHR"
     gene            complement(5501..>6356)
                     /locus_tag="VGQ24_04190"
     CDS             complement(5501..>6356)
                     /locus_tag="VGQ24_04190"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEV8454064.1"
                     /translation="PHLGAALSYYTLFSLAPILVVAISIAGLAFGAEAVRGEIVGQID
                     SLVGHEGALAVQAMLEGAAKPSSSVPATIIGVITFFLGATGAFLELQTALNAIWRVKP
                     KASRSFLRALIVDRLTSFGLVVGVGFLMLTSLLVSAGLAALHTYMGETFPGGPALWEA
                     VNVIVSLAVISILFAMVYKVLPDVDLAWSDVWVGGLVTAGLFTAGKLLIGLYLGTSAF
                     ASSYGAAGSVIVLLVWVYYSAQIILLGAEFTREYVKQFGRRPPPSEFATKDPAPPLKP
                     VRERKGRG"
BASE COUNT         1102 a         2095 c         2086 g         1073 t
ORIGIN      
        1 tcgtggcgtt gagcgtgacc cggccgaagt cggccgggtc acgggtcgtg agtggcgtta
       61 gtgaaccgat tcagctgagg cggttctggt cggcccaacc tgccggatga cctcgaccac
      121 cgaggaaggc tgctcttcga agaggtactg acccgctccg gtaatgctgt cgaggctgaa
      181 gtccggcagc cggtcgcgca gcagctggat ctgcttcggt tccaccccac cctcatgtgg
      241 tgcggttccg attatcaggc gcaccgggca acggatttcc gtcaggtggg gtgagatgcg
      301 ctcgggctcc cgggcctcag ccatggcaat gaacgccagc agggtgccgt ccaggtcggc
      361 cctggcaccg gcggtgtagc catccatcac ctggtcggta acccaggacg cattgcccga
      421 tgccgcgatg agacccttcc tcatctgagg ccgaatcctt ttgatgcctc cgagccattt
      481 gacccagggc gcgtagcgca tggcgcgtcg gaggccgggc gtcgccgccc gttccgcagg
      541 cccgccgtca agcgcaatga gggcacggac ccggccaggg tgtcgatagg caagccgcag
      601 caccatcgag gcaccaagcg aatgccctac cacgatcgcc gggggctcct ccaggctctc
      661 gagtaccgcg tccaggcggt cggcctgggc cgtaagcgag tagtccgctc gtttgggccg
      721 gggtgagcgg ccgatgccga gcggctcaat gacgatggtg cggaatcccg cggccgggag
      781 catcaccagc aagtggcggt agccgaacgc cgagccgaac agtccgggca cgagcacgac
      841 ggtctcaccc gatcccgcga tcgtcacccg cagtgattcc tggggagcga caggcacgag
      901 atagtcctgt actccgcggg gtggtgaagg ggtctgggca agggctgaag caagcgggag
      961 gagcgctaag gcaagcagtg aacgaggcat tggaacctct cgaggagggg aacgaagagt
     1021 cgctgcctgg ccattgccgt tcattggagc gactcttacg ttggacagac tgccgcctcg
     1081 acgttgctcc accgttgcct tccccgtgac cccgcggcaa gcgccgcctc gcaccacggt
     1141 agccatgatc cagtttcaca ctctaggcag gctcgacctg cggggacccg acggtgtcga
     1201 gctacgttcg gtcctccagc agccgaagcg gctggggctc cttgcctacc tcacggttgc
     1261 ctcgccccgc cggttccacc gccgggacac gctgctggga ctcttctggc ccgagctgga
     1321 ccaggagcac gcccgggccg cactccgccg cgccctgtac ttcctccgag cgcaactcgg
     1381 ccccgacgtg gtcgccggcc ggggtgatga cgaggtcggt gtgccagagg aggcgctctg
     1441 gtgcgacgcg acggcgctcg agcgagctct cgacgaggga gcgccggagc aggcggttgg
     1501 actctatcgg ggaacgttcc tggaagggct ctacgtcgcc ggggcggccg cggagtacca
     1561 ggaatggctt gagcgcgagc ggacgaggct tcgcgccggc gccaccacgg ccgcccgcag
     1621 tgtggccgat cagagggaag ccgagggacg tctcgccgat gcggcgcagt ggtgccggcg
     1681 cgcgttggag ttaagccccg atgatgagag cgcagtccgc cgcctgctga ccctgctcga
     1741 ccacatcggg gaccgatccg ccgcgctacg ggtgtacgat gagttcgccc gccgcatgac
     1801 ccaggagttc gagctggagc cgtccgtcga aacccggcag ctggtggaga ccattcgccg
     1861 ccggccagtc tccgctcctc gtcgcgaggc gactcctccg gcagcccagc ccgacttaac
     1921 cgcaaggctc gcggtacttc ccttctccgt gcggggagat gctcgcctgg cctacctgag
     1981 agaagggatg gtggacttgc tggccaccag gctcgatggc gccggtgagc ttcggcccgt
     2041 ggaccaccgc gccgtgcttc ggttcctcag ccacgaccaa ccggttccga ttcccgggcc
     2101 cgctgtcgcc gcgcacttcg aggccggcag ctacctcgag ggaagcatcg tggaggctgg
     2161 cggccgcctg caggcaggag cttcgctgta ttccctcgac gggcaagtgc tcgcgagcgc
     2221 cagcgcgacg gcgggcagcg agggcgagat cttcgagctc gtggatgagc tggctcgcca
     2281 gctcctcgcg gcgcggggag gtacgtcggg cacccgtctg acccgtctgg ccgggctcac
     2341 gaccacctcg ctcgaggcgc tcaaatgcta tctgttgggc gagcgagaac tccgcgcggg
     2401 acgctacttc gatgctctgg aggcgtttca ggccgcgatc gatgccgatc cctcatttgc
     2461 gctggcgtac tacaggctgg ccgcatccgc ggcggggtgt gccttgcccg atctggcccg
     2521 cgagctggca gaccgcggct tcgagtaccg gcaacggctc tccctgcgcg atcagctcgt
     2581 cttcactgcc cagcgcgcct ggctccatgg cgcggtggat gaggccgagt cgctgtacaa
     2641 cacgatcatt ggaacctacc ccgacgacct cgaggcatgg ttccacctgg gtgacctcct
     2701 gttccactcc aacccactcc ggggcagaag ctcggtggaa gcacgcgagc cgctcgaacg
     2761 cgtgctgcga ctcgagcccg atcatgtcgg cgccatggtt cacctggttc gagtttccgc
     2821 catcgaagga cgcaaaggcg agacgctcga cctgatcgag cgcattctac gagccagtcc
     2881 ggacggcgat caggcgctgg cgatgcgagc cttgcgggcg tataccacgg gagaccgaac
     2941 ggccatcgaa caggtgtccg ccgagctgca ccgggcccgg gccgtgaccg ttgccatcgc
     3001 gttctcggat gtggcgctct actcggggga cctcgccggc gcggagcacc tggcccgaag
     3061 cttcatccag gtggcacgct cgccggagct tcgctccctc tgtcatgcgc tggtggccca
     3121 cgtggccctc gcgggaggcc gtgacgacct cgcgcgggcc cagttggagc tggccgagtc
     3181 gctcgaccgg acctggggcc tggagatgcg cgctctcttt tccattctgc ccttccggcc
     3241 ggtatccgag gcggagcttc gggacctgcg ccggacactc gaggactggg atccggccgg
     3301 cgtggcgccg agcatgtttc tgatttttgc gatgcacaac gacctacacc cggctctgcg
     3361 ggtctacctg ctgggattga tcgatctgcg gctgggagac gtggcttctg ccgtcgagca
     3421 ggcagaattg ctcgaggcgc tggccggccc agccgaaggg ctggtggcca gcctgttggt
     3481 cgagctccag gcggcgattg cccgggccga aggccggccc gaggacgcgc tccgaatcct
     3541 ggagcggtcc cacccgaggt tgtggtttca gctcacggtc gcttcgccgt tcttctcact
     3601 cgcgtctcag cgctatcttc gcgcggagct cctgcgcggg gtcgggcgcc tggaggaagc
     3661 ggccggctgg tacagatcga tcgccgagcg atcaccctat gagctgatct acgccggccc
     3721 agcccaaagg cgcctgtcgg agatgggcga tctggccctc agccgttgat cgtgcgcata
     3781 gccgcctcgt tgtatcgatc gccgacggcg gcacccttcg gcgcgacctc caaaatctcc
     3841 tccagatcgg caccggtgag ctccacatcg agagccccga cgttctcctc gagatagcgg
     3901 cgctgcttgg ttccggggat cggcacgatg tcctcaccct gcgccagcaa ccacgccagc
     3961 gccagctgcg ccggggtgca ttgcttccgc ccggcaatct cctccgcccg ctcgaccaga
     4021 tcgagattct tctggaagtt ctcgccctgg aaccggggcg agttgcgtcg gtagtcatcc
     4081 tcgggcaaat cctcgaaggt gcggaaccgc ccggtgagga atccccggcc aagcgggctg
     4141 tacgccacga agccgatccc gagctcgcga cagagtggca aaacctcgtc ttcggggtcg
     4201 cgggtccaaa gtgaatactc ggtctggaga gccgagatgg gatgctcctc gttagcccgg
     4261 cggatcgtta ccggcgccgc ctcggacagg cccagataac ggaccttgcc ctctcgaacc
     4321 aagtctgcca tcgcccccac cgtctcctcg atcggcacgg tgcggtctac ccgatgctga
     4381 tagtagagat cgatgtgatc gatgccgagc cgctggagcg agccatcaca cgatttcctg
     4441 acgtactccg ggcggccgtt caccccgaga aaactaccgt cttccccgcg ctcgttgccg
     4501 aatttggtgg cgagaaccac ctcgtgccgc cggccgcgga tggccttgcc gacgagacgt
     4561 tcgttggtga agggcccgta catgtcggcc gtgtccagaa agttgatctc gagatcaagc
     4621 gcccgctgaa tggtcgcgat cgactcggcg tcattgcgcc cggtataaaa ctccgacatc
     4681 cccatacagc cgagaccgag ggctgagacc ctcaagccct gccggccaag cgcgcggctt
     4741 tgcatctgcg atctccgtat acttaggtct agggtctaga gtctagagcc ggaatgtatg
     4801 cgatcgcgag tttgagcgta gactctagac cctagaccct ggacgtttcc aaacgaggca
     4861 accgcgatgg gcatggatcg gcagatgaac cggatttgtg tgttctgcgg gacgaacccc
     4921 gggtcgcgac ccgagtacgg ggcggccgcc cgggagctcg gccagatatt ggccgagcag
     4981 ggcatcgagc tggtctatgg cggggccagt gtcggcatca tgggcgagct ggcggactcc
     5041 gtccacgagc acggtggtca cgtgaccggc atcatcccgc agcagctcat ggaaaaggaa
     5101 gcagcgcata ccgggattcc gaacctcatc gtggtcgcgt ccatgcatca acgcaaatcc
     5161 cagatggccg acatgtcgga tgggttcatc gcactaccgg gagggatcgg tacgctcgag
     5221 ggcttcttag aaattctcac ctgggggcag ctcgggattc acgccaagcc ctcgggtatc
     5281 ctcaacgtcg cgggatactt cgatgggctg atccgattcc tggatcatgc ggtgcaggaa
     5341 ggattcctga ccgaggagca ccggggcgcc atcatcatgg agtcggatcc ccgacgcctg
     5401 ctcgagcaca tgcaggcctc caccccaccc gacagcgaga agctcatggg gcggacacat
     5461 cggtaaggcg gtaaggcggt aagaacggac aggtgcaagc ttagccccgc cctttccgct
     5521 cccgaaccgg cttcagcggg ggagcgggat ccttggtggc aaactcagag ggcgggggcc
     5581 ggcgcccgaa ctgcttgacg tattcccggg taaactccgc gccgagcaaa atgatctgtg
     5641 ccgagtagta aacccacacc aggaggacga tgaccgagcc tgccgctccg taggaggacg
     5701 cgaaggcgct ggtacccagg tagagcccga tcagcagctt ccccgcggta aagagtcccg
     5761 ccgtcaccaa cccacccacc cacacatcac tccacgccag gtccacatcc ggcaggactt
     5821 tatagaccat agcaaacaga atgctgatca cggcgagcga gacgatcacg tttaccgctt
     5881 cccacagagc cggtccgccg ggaaaggtct ctcccatgta ggtgtgcagt gccgcgaggc
     5941 ctgcgcttac gagcagcgac gtgagcatca gaaagcccac gccgaccacc agaccgaacg
     6001 aagtcaagcg gtcgacgatc agggctcgaa ggaagcttct actcgccttg ggtttgaccc
     6061 gccagatggc attcagcgcg gtctgcagct ccagaaacgc accggtcgct cccaggaaga
     6121 aggtgatgac cccgatgatg gttgcgggga cactggacga cggcttggcg gctccttcga
     6181 gcatcgcctg caccgccagg gccccctcat gtccgaccag gctatcgatc tgtccgacga
     6241 tctcgcctcg caccgcctcg gcaccgaagg ccagccccgc gatggatatc gccaccacga
     6301 ggatcggggc gagcgagaag agcgtgtaat aggacagcgc cgcgcccagg tgaggg
//
LOCUS       DASYRV010000169         1655 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1516089, whole genome shotgun sequence.
ACCESSION   DASYRV010000169 DASYRV010000000
VERSION     DASYRV010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1516089"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..390)
                     /locus_tag="VGQ24_04195"
     CDS             complement(<1..390)
                     /locus_tag="VGQ24_04195"
                     /EC_number="1.14.19.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045300 - acyl-[acyl-carrier-protein]
                     desaturase activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP desaturase"
                     /protein_id="HEV8454065.1"
                     /translation="MGIATEPARELYSKLEVLQDLEQKVRELMEAHERKRELWFPSDL
                     LGPAPDEDPEAHLAELRARAEGIPDPARAALALNLLTEEGLPHFHRLLAVYLGDDSFW
                     RSWNNLWTAEEDRHGQVLHDYARDTRIL"
     gene            complement(478..927)
                     /locus_tag="VGQ24_04200"
     CDS             complement(478..927)
                     /locus_tag="VGQ24_04200"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEV8454066.1"
                     /translation="MSELTIRDMEQDEDFAAWFSEILEQEEDPAGWSSALDERYLILS
                     NEIGDWIGGLRYWLRAGVAHLVDVVVLPQERHRGHAHRLLAAFEQRAVESGAHLAEFW
                     TDDPRSEGLLAALGWRRIFVREGYLGRRTWSLMEKTLSPTASQIPPA"
     gene            1142..1591
                     /gene="trxA"
                     /locus_tag="VGQ24_04205"
     CDS             1142..1591
                     /gene="trxA"
                     /locus_tag="VGQ24_04205"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEV8454067.1"
                     /translation="MANTTDTARTVVVQCPFCSAPNRVDLNRLAAGPKCAKCGKPIRL
                     DRPQKVTDKEFDRTISNASVPVLVDFYADWCGPCKMMAPTLDELAHKRAGEALVLKLD
                     TEANPLTASRFGIRGIPTLISFQGGKERGRHVGLADMKTLEGLVSSS"
BASE COUNT          312 a          541 c          503 g          299 t
ORIGIN      
        1 caggatgcgg gtgtcccgcg cgtagtcgtg gagtacctgc ccgtgccggt cctcctcggc
       61 ggtccacaga ttattccagc tgcgccagaa gctgtcatcc cccaggtaca ccgcgagcag
      121 ccggtgaaag tgcggcaatc cttcttcggt gagaaggttc agggccagcg cggcccgggc
      181 ggggtccggt atgccctcag cccgagcacg cagctccgcc agatgggcct cggggtcttc
      241 atccggcgcc ggccccagca aatcggaggg gaaccagagc tcgcgcttac gctcgtgcgc
      301 ctccatgagc tcgcgaacct tttgctcgag atcctgaagc acttcgagct tcgagtagag
      361 ttcccgtgcg ggttcggtgg caatgcccat ggtcaccttc gacaaacagg aggcatacgt
      421 actatggggg aagaaaccag ccactaaaga tagtgtcgcc cgtcccgacg atgctactca
      481 ggcgggaggg atctgggacg ccgttggact gagagtcttc tccatcaagg accaggttcg
      541 gcgtcccaag tagccttctc gtacgaagat gcggcgccac cccagggcgg ccagcagtcc
      601 ttctgagcgg gggtcgtcgg tccagaactc cgcaagatgg gcaccggatt cgaccgcacg
      661 ttgttcgaaa gccgccagca ggcggtgggc atggccacgg tggcgttcct ggggcaaaac
      721 caccacgtca accaggtggg cgacccctgc ccggagccag taccggagcc ctccgatcca
      781 atcgccgatc tcgttgctga ggatcaggta acgttcatcg agcgcgctgg accagccggc
      841 tgggtcctct tcttgctcga gaatctcgga aaaccaggcc gcgaagtcct cgtcctgttc
      901 catgtcacga atcgtcagct cgctcatctg ccaccgcctt cccgatggga gactcccatc
      961 ccttcgtaag caacactaat gccacgcctg ctgttcctgt ctgtgaaggt gatcaccggt
     1021 cgccagggct gctccgcaca ccgcggctcc ggcgacctac atttgccttg gacttctgcg
     1081 aggctaagct tcgagatgtg cgcgcggcac ggaggtgcgc cagaccccag tgaggcggta
     1141 tatggctaat actacagata cagcccggac ggtagtcgtg cagtgtccct tttgctcggc
     1201 tccgaatcgg gtggatctga accgcctcgc ggccggtccc aagtgcgcca agtgcggaaa
     1261 gccgattcgg ctcgatcgcc cgcagaaggt gaccgacaag gagttcgacc gtacgatcag
     1321 caacgccagc gttccggtgc tcgtcgactt ctacgccgac tggtgcgggc cctgcaagat
     1381 gatggcaccg actctcgatg agctggccca caagcgtgcc ggtgaggcgc tggtcctcaa
     1441 gctcgacacc gaagcaaacc ctcttaccgc gtcccgcttc gggattcggg gaatccccac
     1501 cctgatttcc ttccagggcg gcaaggagcg gggcagacat gtaggcctgg ccgacatgaa
     1561 aacgctcgaa gggctggtat cctcctccta gcgagtacgc tatcgcagcc cggcggccac
     1621 gcctaccacg agcccgacca ctgccagcgc cataa
//
LOCUS       DASYRV010000170         7711 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2317184, whole genome shotgun sequence.
ACCESSION   DASYRV010000170 DASYRV010000000
VERSION     DASYRV010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7711
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2317184"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(256..876)
                     /locus_tag="VGQ24_04210"
     CDS             complement(256..876)
                     /locus_tag="VGQ24_04210"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEV8454068.1"
                     /translation="MRALLVHGMGRTPLSMLRLGRKLRRAGHTVDVFGYMTAVEPFAR
                     IVLRAQERFARTGARGAYVVVGHSLGGLLTRAALGSRPPSFTWPAHLIMLGTPNRPPR
                     QARRYGKLLAYRWINGECGQLLAREDFFARLPPLSIPYTIVAGTRSGPGRRAFGDEPN
                     DGLVAVSETLIAPSDTPITIPARHTFMMNDRRVLAVILRVLQSLEK"
     gene            complement(894..1202)
                     /locus_tag="VGQ24_04215"
     CDS             complement(894..1202)
                     /locus_tag="VGQ24_04215"
                     /inference="COORDINATES: protein motif:HMM:NF009508.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI-like protein"
                     /protein_id="HEV8454069.1"
                     /translation="MHYLLFYDVVDDYITRRVPVRSAHLDYAQPFVERGELILAGALA
                     EPADAAILLFQATSPALVEAFAQADPYVLGGLVRRWWVREWTTVLGPLAAVPIQSGSR
                     "
     gene            complement(1297..1524)
                     /locus_tag="VGQ24_04220"
     CDS             complement(1297..1524)
                     /locus_tag="VGQ24_04220"
                     /inference="COORDINATES: protein motif:HMM:NF016246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 family protein"
                     /protein_id="HEV8454070.1"
                     /translation="MSYAKSQPFTPARWQTFARRYRSEMRTPASRRLLATLAALSAQA
                     NFSVGCYCADEARCHRSLLRQLLVEAGATVL"
     gene            complement(1692..2054)
                     /locus_tag="VGQ24_04225"
     CDS             complement(1692..2054)
                     /locus_tag="VGQ24_04225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454071.1"
                     /translation="MNPRRWSAFLLGLILGAAIWLLSPWITGRSEPWDAEGAYYRGAL
                     LVTGAFGGLLIPLHWPAVALGIFAGQLLVILGGVLADPASGGLWPLGVVFLGVYSVLA
                     LVGALLGAVLRRGHPRKQ"
     gene            complement(2070..2393)
                     /locus_tag="VGQ24_04230"
     CDS             complement(2070..2393)
                     /locus_tag="VGQ24_04230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454072.1"
                     /translation="MPTAFAVALWRRGDRHGATVPLWWLGQNCWNISVYVRDARAQEL
                     PLVGSGEHDWTFLLAHAGWLERDQAVGAAVYLIGVVLYAMAIVAGWVFLRSRETPAEE
                     AAVGA"
     gene            2841..3191
                     /locus_tag="VGQ24_04235"
     CDS             2841..3191
                     /locus_tag="VGQ24_04235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454073.1"
                     /translation="MVTILHRPALILLLAAACHSGAPGDTEPATQTRARIENRASLDM
                     DISVRRNDGRVSRLGFAPGDETTVFALPPSLTAGASWVRFEAKPVRSTGQAVVSEPFP
                     VTMGEEITWSVPPQ"
     gene            3188..3394
                     /locus_tag="VGQ24_04240"
     CDS             3188..3394
                     /locus_tag="VGQ24_04240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454074.1"
                     /translation="MSWEKGFDPPTPYRPGANEQPSTLPKDTQGQAINEQRRREKQDI
                     AAFLEKHGRKPTRKELKELGRKRT"
     gene            complement(3454..3536)
                     /locus_tag="VGQ24_04245"
     tRNA            complement(3454..3536)
                     /locus_tag="VGQ24_04245"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3501..3503),aa:Leu,seq:taa)
     gene            complement(3562..4749)
                     /gene="galK"
                     /locus_tag="VGQ24_04250"
     CDS             complement(3562..4749)
                     /gene="galK"
                     /locus_tag="VGQ24_04250"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004335 - galactokinase activity [Evidence
                     IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HEV8454075.1"
                     /translation="MPHSPSREKTASVNHVSSARLATSLFTIGFASRPTVIASAPGRV
                     NLIGEHTDYNGGPVLPVAVERRTAAAARVADQWLLVSDTEPGIQNVAIDAPMRRRWTD
                     YVVGVVRELRSLHAAPAGAEIAIATTLPIGAGLSSSAALTVALARALSLLAGRRLSPA
                     QLVEVAFRAEYHQVGVRCGRMDQTIAVHAEPRTALLFDTATGALRQVPFPGRLWVIET
                     GRSHRLTGGALNQRRRECEEALAFCREWRPALQHLAQLSPSDLPEMERRLPPPLVPRV
                     RHVVTETARTRAAADALATRDLSRLGQLLVQGHESLRDDYQSTIPEADFIVASALEHG
                     AYGARLTGAGWGGAVVVLAPREREARIVAEIGGDFAARFGRHPATWSTRASGGVRRET
                     VPA"
     gene            4798..6273
                     /locus_tag="VGQ24_04255"
     CDS             4798..6273
                     /locus_tag="VGQ24_04255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454076.1"
                     /translation="MWAQLAPVGVPGGVVRLELDGSLETFDQRFRAGHLDSYAADLAS
                     PALGSDRIPALEDADARVGRIIGNAGYRINLGASGAEALADVGTGFLGLSLGLTNQIT
                     LFGRMPLVSARVQPTLALNPAAADGGPNPGQAAQGTFFGDFDAALTTLTNKIAAGDYD
                     ANPSQKALAVATLADATTLRGDLFGLLADPATASPFVPTLISTAGAAIDARVAALQNT
                     LESSLSVPGFTTSPALPAEALTQAELFEGLTGPLALRLGQAKVTFRGDAEAGAAVTLI
                     DRWDRGAHRGGLRTAISGLVRFPTGRRERSDHPLDIGTGDGQTDIQVDVVTDIGAGVL
                     GARLTGTYLRQLPSTILVRVTAPSQPLVGPERLAFVRRDPGDVLAIGVRPFYRLARTF
                     ALQAGLEHWSHKADVVSYAPPSGAIPGVDASVLAEESSANATVLSVGVTYANPGGLRP
                     GGTGLPVDASWSYERVLRAGGGRVPDTHAVRARFRVYFGLW"
     gene            complement(6314..>7711)
                     /locus_tag="VGQ24_04260"
     CDS             complement(6314..>7711)
                     /locus_tag="VGQ24_04260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HEV8454077.1"
                     /translation="VRREVSAEGRSRAWVNGSPTTAAVLADLGALLVDLHGQHETQSL
                     LHAEAQRDILDAFAHAEAGRGAVAEAYATVAALRAEQSALEARRDEVRRRADYLRHVV
                     DEIDAARLKPGEDETLQVEARRLSQAGALVEQALRIVEALEGESGNALGALGVANRAL
                     AGLEKIDPTTGEWRELLDGAYANLSELSRLATEYAGSVQEDPDRLAAIERRRDLLFRL
                     TGKYGATLEAVLATREEAAAELDLLDTADTDLRGLAARRAATEAVLLAAADALSARRS
                     EASDRLARGVNRLLPQLGLAGGKLSVVLTPLDEPGAHGRETVQLRVQLNVGLEAKPLA
                     KVASGGELSRLMLALKVVLVKHDAIATLVFDEVDQGIGGETGAQVGSALAEVAERHQV
                     LVITHLPQIAARADSHLVVSKEARRGIATSDVQVLHGEDRINEIARMLGDAEGEAARR
                     HAQALLGSPAIAKRR"
BASE COUNT         1365 a         2613 c         2519 g         1214 t
ORIGIN      
        1 ggtcccttgg cctctatacc gtggccaatg atcttgcact cgcagtgctg gcacaccggc
       61 gcgagtttgt gaatcgcgca ctcgaagctg tcgaacgtat gggtgttgcc ggcagcgatc
      121 acctggaaag acaggtagta atcattgccg cagacctcac atcgagccat gggaaccctc
      181 ctggtcgggc agcacggtgc cgcccacccg ggaagagtga cgttaccaca ggccgattgc
      241 cagcccctgt cctcgttact tctccaggct ctggagaact cgaaggatta cagccaacac
      301 cctgcggtcg ttcatcatga acgtgtgccg cgcgggtatg gtgattggcg tgtcggacgg
      361 cgcgatgagg gtttcgctta ccgccacgag gccgtcgtta ggctcgtctc cgaaggcacg
      421 ccggccaggt ccactacggg ttccggcgac gatcgtgtag ggaatcgaca gcggtggaag
      481 ccgcgcaaag aagtcttccc gtgcgagaag ctggccgcat tcgccgttga tccaccgata
      541 tgccaacagc ttcccgtaac gacgcgcctg gcggggtggt cggttgggtg tgcccagcat
      601 gatgagatgc gcaggccagg tgaacgatgg tggccggctt cccagagcag cgcgcgtcaa
      661 caatccaccc agcgagtgcc ccaccaccac ataggctccc cgagccccgg tcctggcgaa
      721 gcgctcctgt gcccgcagca cgatcctggc gaatggctcc acggcggtca tgtagccgaa
      781 gacgtccacg gtatgacccg cgcgccggag cttgcgccca aggcgaagca tagacagggg
      841 ggtgcggccc atgccgtgaa cgagtagcgc ccgcatgatg agagtgatcc gcgctaacgt
      901 gatccggatt ggatgggaac cgcggccagc ggacccagca ccgtggtcca ctcgcgtacc
      961 caccaacgcc tgaccagccc gcccagcacg tagggatccg cctgtgcgaa tgcctctacc
     1021 agagccggtg aagttgcctg gaaaagcagg atggcggcat ccgccggctc cgcgagcgca
     1081 cccgccagga tcagctcccc gcgctcgacg aagggctgcg cgtagtccag gtgagccgac
     1141 cggactggca cgcggcgagt gatgtagtcg tccaccacat catagaagag caggtagtgc
     1201 acgatacctc cgatggggtg aggctcaatg gctggtgcct cccggccgac ccctcaactc
     1261 tacccgttgg gaagcgagga gcaagttgtc ggcggcctac agaaccgtcg caccggcctc
     1321 gaccaggagc tgccggagca gggagcggtg gcagcgggct tcatcggcgc aatagcaccc
     1381 gaccgagaag ttcgcctggg ctgacagtgc cgcgagcgtg gccagcaacc gcctggacgc
     1441 cggcgtacgc atctcggaac gatagcgacg ggcgaaggtt tgccatcgcg cgggtgtaaa
     1501 cggctgggat ttcgcgtagg acaccagcgg gggctcggcg ccaggtcggg aagccacagg
     1561 tcgaaataat ccaggcgagc gtaatcctcc tttcgcacgc cgcgtggtgg gcggcgtacg
     1621 gtggcgaagc gcggtccttc gccgggctcg cgtggggccc cgagccgcac gattcgaatc
     1681 gccatggttc cctactgctt tcgcgggtgg ccgcgccgga ggacggcgcc aagtaacgct
     1741 ccgaccagcg cgagcaccga gtagacgccc agaaagacca cgccaagagg ccagaggccg
     1801 ccactggccg gatccgccag tacaccgccg aggatgacaa gcagctggcc ggcaaagatc
     1861 ccaagcgcca cggcgggcca gtgcagcggt atgaggagac ccccgaatgc tcccgttacc
     1921 agcaacgccc cccggtaata ggcgccctcc gcgtcccatg gctcggagcg tccggtaatc
     1981 cagggcgaca acaaccagat ggcggcaccg aggatgaggc cgaggagaaa tgcggaccag
     2041 cggcgaggat tcatgctgat gccgccgagc tacgcaccca cggctgcttc ttcggctggg
     2101 gtctcgcgag agcggagaaa gacccaccca gctacgatgg ccatcgcgta cagcacgaca
     2161 ccaatgaggt acaccgccgc accgacggcc tggtcccgct cgagccagcc ggcatgagcg
     2221 agcaggaagg tccagtcatg ctcgccactg ccgaccaacg gcaattcctg ggcgcgggcg
     2281 tctctgacat agacggagat gttccagcag ttctgcccca gccaccagag gggcaccgtg
     2341 gcaccgtgtc ggtcgccccg acgccacagc gccactgcga aggcggttgg cacgatgagt
     2401 tggaagaggg ttccacccaa gacggctaga atctcaccat cgaaggcgaa gaccagatgg
     2461 ccggtttcgt gaatcgcaag atcgaggctg tcgagccaac ggtaggtgtc cggcgaaagc
     2521 aggcaaagcc agccatatac ggccagaact acggtgaggg cggtccgcca acgccgctcc
     2581 ctctcggtat agcgcaggac ggtctccagg tgtttccctc cgataagact gtcgtgtttg
     2641 tcaggctatc ggcagcccgg ccattccata ttggcacgca tagtgtgccc caccatcggc
     2701 acacaagata cttcccgtct gaccgtgatg aggagggtgt atggcgcaaa ggccacctcc
     2761 ggcccggaag ccggacgctg gagcccaggg ggacggcagg ctaggttcgg aagaacgagc
     2821 ccccaccagc gagcgtagct atggtaacca tactccacag acccgccctg atcctcctac
     2881 ttgccgccgc atgccacagc ggcgcacccg gcgacacgga acccgcaact cagacccgcg
     2941 cacgcatcga aaaccgagcc tcgctcgaca tggacatctc ggtgcgccgc aacgacggtc
     3001 gggtgagccg cttggggttt gccccgggtg acgaaaccac cgtttttgcc ctgccaccca
     3061 gtctcaccgc cggcgcgtcc tgggttaggt tcgaggccaa gcccgtccgc tcgacgggcc
     3121 aggcggtcgt gagcgagccg tttccggtga cgatggggga ggagattacc tggtcggtgc
     3181 cgccgcagtg agctgggaga aaggcttcga cccgccgact ccgtatcgcc ccggagccaa
     3241 cgagcagccg tcaacgctgc ctaaggacac acagggacag gcgatcaacg agcagcgccg
     3301 gcgcgaaaaa caggacatcg ccgccttcct cgagaagcac ggccgaaagc ccacgcggaa
     3361 ggaactcaag gagctgggaa gaaaacggac ttaacccctt ggcggccaag ggtgcggtgt
     3421 ggaaagcgag gtactgctgg catgagaagc caatgctccg ggtgggaatc gaacccacaa
     3481 gggatatctc ccagcggatt ttaagtccgc agcgtttgcc atttcgccac cggagcccct
     3541 cggcgagggg aatataccgc gctacgccgg aaccgtctcc cgccggacgc cgccggacgc
     3601 ccgcgtgctc cacgtcgccg gatggcgtcc gaagcgcgct gcgaagtctc ccccgatctc
     3661 cgcgacaatc ctggcctccc gctcccgggg agcgagcacc acaacagcgc caccccaacc
     3721 cgcaccggtg agccgtgccc catacgcccc atgctccagc gcggaagcca cgatgaaatc
     3781 cgcttccgga atggtggact gataatcatc tcgcagcgac tcgtggcctt gcaccagaag
     3841 ctggcccagc cgactcaggt ctcgagtggc gagcgcgtcg gcggcggcac gggttcgtgc
     3901 ggtctcggtg accacatggc gaactctcgg caccagtggc ggcggtagtc ggcgctccat
     3961 ttcgggcaga tccgatggcg agagttgcgc gaggtgctga agggcagggc gccattcgcg
     4021 gcagaaagcc agcgcttcct cgcattcccg gcgccgttgg ttgagcgcgc caccggtgag
     4081 ccggtgggag cggccggttt cgatgaccca aagccgcccc ggaaacggca cctggcgcag
     4141 tgcgccggtg gccgtatcga acaggagcgc ggtgcgcggc tcagcatgca ccgcaatcgt
     4201 ctggtccatc cggccgcagc gtacccccac ctggtgatac tccgcccgaa acgccacctc
     4261 caccagctgc gccggcgaga gccgccggcc ggccaagagg ctgagggccc tcgccagtgc
     4321 gacggtcagg gcggcagatg aggagagacc ggcaccgatc gggagcgtcg tggcaatggc
     4381 gatctccgcc ccggccggtg ccgcgtgcag cgaacgcagc tcgcgaacca caccgacgac
     4441 gtaatcggtc cacctccggc gcatcggtgc gtcaatagcg acgttctgaa taccgggctc
     4501 ggtatccgat accaggagcc actggtccgc cactcgcgcg gccgcggcgg tgcggcgctc
     4561 aaccgcgacc ggcagcacgg gaccgccgtt gtaatcggta tgttccccga tcagattgac
     4621 ccggcccggt gccgaggcga tcaccgtggg cctgctggca aagccgatgg taaacagcga
     4681 agttgccagc cttgccgatg acacatggtt gacgctggct gtcttctctc gggagggact
     4741 gtggggcatt gcgtgcggcg cctcggaatt gttgcctgcc tgattggacc atcgcgggtg
     4801 tgggcgcagc tcgctccggt cggagtgccg ggcggcgtcg tgcggctgga gctcgatggc
     4861 tcgctggaga cgttcgacca gcgcttccgc gccggtcatc tggatagtta tgcggccgat
     4921 ctcgccagcc cggcgctcgg gagcgaccgg atccctgcac tggaggatgc ggacgcacga
     4981 gtcggccgga tcatcggcaa tgcgggctac cggatcaatc taggcgcgtc gggggccgag
     5041 gcgctggccg acgtgggcac cggtttcctg gggctcagtc tggggctcac caatcagatc
     5101 acgctcttcg gacgaatgcc gctcgtcagc gcgcgagtgc aacccactct ggcgctgaat
     5161 ccggctgccg ccgacggtgg accaaatccc ggacaagcgg cacagggcac attcttcggc
     5221 gatttcgatg ccgccctcac aaccctgacc aacaagatcg cggcgggtga ctacgacgcc
     5281 aacccgtccc agaaggcttt ggcggtagcc acgctggccg acgcgaccac gctacggggt
     5341 gatctattcg gcctcttagc cgatccggca acggcctcgc ctttcgttcc caccctcatc
     5401 agcaccgccg gtgcggccat cgacgcccgg gtagcggcgc tgcagaatac gctggagagc
     5461 tcgctgagcg tgccgggttt tactaccagc cccgccctgc ccgccgaggc cctcacccag
     5521 gcggagctgt ttgaagggct caccggtcca ctcgccctgc gcctgggcca ggccaaggtg
     5581 acgtttcggg gcgatgccga ggccggggca gcagtgaccc tgatcgaccg ctgggatcgg
     5641 ggcgcccatc ggggtgggct caggacggcg atctccggcc tggttcgttt tccgaccggt
     5701 cgtcgcgagc ggagtgatca tccactcgat atcgggaccg gcgacggcca gaccgatatt
     5761 caggtggacg tggtgactga catcggcgcc ggcgttctgg gcgctcggct caccggcacc
     5821 tacctgcgac agcttccctc gaccatcctg gtccgggtga ccgctcccag ccagccactg
     5881 gttggtcccg agcgcctggc cttcgtgcga cgcgatcccg gtgacgtcct ggccatcggc
     5941 gtgcggccct tctaccggct ggcccgaacg tttgcactcc aggcgggcct ggagcactgg
     6001 tctcacaagg ccgatgtcgt ctcgtacgct ccacccagcg gggcaatacc aggagttgac
     6061 gcgagcgtgc tggcggagga gagcagcgcg aacgctacgg ttctctcggt tggagtaacc
     6121 tacgccaacc ctggcgggct ccggccgggc gggactggac tgccggtgga cgcgagctgg
     6181 agttacgagc gggtgctgcg cgcaggaggt ggacgggtgc ccgataccca cgcggtacgg
     6241 gcgcggttcc gggtgtattt cgggttgtgg tgattctcct catcccgggc gcagcgagga
     6301 atgaggaaat gccctaccgt cgctttgcga tcgcggggct tcccaacagc gcttgtgcat
     6361 gccgccgcgc agcctcgccc tccgcgtcgc cgagcatgcg cgcgatctcg ttgatccggt
     6421 cctcgccatg aagtacctgc acgtcgctcg tggcgattcc gcgccgtgcc tctttcgaca
     6481 ccaccagatg actgtccgcc cgggcagcga tctgcggcag gtgggtaatg accagcacct
     6541 gatgtcgctc cgcgacctcg gccagcgctg atcccacctg ggcaccggtc tcgccgccaa
     6601 ttccctggtc cacctcgtcg aacaccagcg tcgcgatggc atcgtgcttt accagcacga
     6661 ccttgagcgc gagcatcagt cgcgagagct cgccgcctga cgccaccttg gccagtggct
     6721 tggcctccaa cccgacattg agctggaccc gtagctgcac ggtctctcgc ccgtgtgcgc
     6781 ccggctcgtc caatggagtg agcacgacgg acagcttccc gccggcaagc cccagctgag
     6841 gcagcagccg gttcactccg cgcgccagcc gatctgacgc ttcactcctg cgggcactca
     6901 acgcatcggc cgcggccagg agcactgctt cggttgccgc ccggcgggcc gccagcccgc
     6961 gcaggtcggt gtccgccgtg tccagcaggt ccagctcggc ggccgcctcc tcacgggttg
     7021 ccaacactgc ctccagcgtc gctccatact tgccggtgag cctgaacaaa aggtcacgcc
     7081 gccgctcgat cgcggccagc cggtccgggt cctcctggac ggaaccggcg tactcggttg
     7141 ccagccggct cagctcggag agattggcgt aggcgccatc cagcagctcg cgccattcac
     7201 cggtcgtggg gtcgatcttc tccagacccg cgagagcccg gtttgccaca ccgagcgccc
     7261 cgagggcgtt gccgctttcg ccttcgagcg cctcgacgat ccgcagcgcc tgctcgacca
     7321 gagccccagc ctggctgagg cgccgagcct ctacctgaag cgtctcatcc tcgcccggct
     7381 tgagcctggc agcgtcgatc tcatccacaa cgtggcgcaa gtagtccgcc ctgcggcgca
     7441 cctcgtcacg ccgggcctcg agggccgact gctcggcacg gagcgccgcg acggtggcat
     7501 acgcctcagc cacggctccc cgccccgcct cggcgtgggc aaatgcatcg aggatgtctc
     7561 gctgagcttc ggcatgcagg agcgattggg tttcgtgttg tccgtggaga tcgaccagca
     7621 gggcaccgag gtcggccagc actgctgcgg tggtcgggct gccattgacc cacgctcgcg
     7681 accgcccctc ggcggagacc tcgcgcctta c
//
LOCUS       DASYRV010000171         3057 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1306477, whole genome shotgun sequence.
ACCESSION   DASYRV010000171 DASYRV010000000
VERSION     DASYRV010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3057
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1306477"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            611..1870
                     /gene="ltrA"
                     /locus_tag="VGQ24_04265"
     CDS             611..1870
                     /gene="ltrA"
                     /locus_tag="VGQ24_04265"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: protein motif:HMM:TIGR04416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HEV8454078.1"
                     /translation="MGKPGPEGKPFKTPKQLVWEAWKQVKANKGAAGVDGCSIEDFEK
                     DLRNSLYKIWNRMSSGTYFPPPVRAVEIPKPHGGGTRILGIPTVADRVAQTVAALALE
                     SRTESIFHDDSYGYRPGRSPLMAVDKCRERCWKKDWVTGLDVRKLFDSVDHDLMVRAV
                     EANITPGQRWVVLYVKRWLKAPVLMPDGRLAGRHRGTPQGSAVSPVLANLFMHYAFDS
                     WLEREFPAVEFERFADDAVVHCATERQARQVLDALGQRMAQVGLALHPEKTKIVYCKD
                     RKRHLSYETASFTFLGYTFRARKAPTRHGRSMFAAFLPAVSRDALKKMGGEVRRWRIS
                     LRTTSDIEELAEWMSPVIRGWMTYYGKFYRTELNGLLRRINTYLVRWARRKFRRLRSF
                     KRARRWWNGLLRRQPGLFTHWAWMTEF"
     gene            2032..2514
                     /locus_tag="VGQ24_04270"
     CDS             2032..2514
                     /locus_tag="VGQ24_04270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454079.1"
                     /translation="MTRYALPVGESGSLEAQGLLVDALQVSFAELAAVAQEVTKEGQL
                     LLGVGARFASPSSAMGPYIRQASCLIEEYYADDYVDHNPQVPPGRRRPARACRGAVTP
                     VGAGGGVLRILASLRPAVTVERVTGIEPASRAWKAVSRGKAAPAPTPNGQVRADPNEP
                     "
     gene            2633..2872
                     /locus_tag="VGQ24_04275"
     CDS             2633..2872
                     /locus_tag="VGQ24_04275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454080.1"
                     /translation="MALKKRVTPKRWRSKEAKEIVAAVQRAGGQVERTASGHLKVIGP
                     AGSAIVASAPNAGRAGGRAVHNTLATIRSKTGLEV"
BASE COUNT          569 a          882 c         1114 g          492 t
ORIGIN      
        1 ggcattgttg cgccgcgagc gcggagagga gtcgcatgtg taggtaggta agcgattcgt
       61 cgatgtggtg ctgcacagga gatgaaggtc ttgtggccct tcggcgccgc cctgcggggg
      121 gaggcgtcaa atcacctcaa ggtgcgctag ctgaagactg tcgtgctgag cgttgaggaa
      181 aaggcggtgt aagagccgtc agatggggac caggaagacg aacgcgagtg aaccactgtt
      241 gacgtgccga gatttaggaa acggcatcga aaccggggtg tcaatgcggt cccgggatga
      301 gcctggcggg tgcccgtatt cctggccagg cggtgtccgg catggaggtg gcgtgagcct
      361 ggtctgcggc ttctgtgcgg aacgcgggaa agcgcgcgct gatactgccc cggccgtctg
      421 agcggcggcg ggggacgaga gggagcacac cggagcggca gaaaccgcga ggtgccgagt
      481 accggtgcgg cgcgtgctgg cggaccggct cgtggcagcg gtgaggctcc tgtaatgggg
      541 gcggagcgaa ggggccggct catctgtggt ttgctcgcgc gagcaaccag ggcctcctgg
      601 gaggagacga gtgggcaagc caggtccgga aggaaaaccg ttcaagacac cgaagcagct
      661 ggtgtgggag gcgtggaagc aagtcaaggc gaacaagggt gccgccgggg tggacgggtg
      721 ctccatcgag gacttcgaga aagatctgag gaacagtctc tacaagatct ggaaccggat
      781 gtcatcgggg acctactttc cgcctccggt gcgggcagtg gaaataccga aaccgcatgg
      841 cggcgggacg agaatcctcg gcattcccac cgtcgccgac cgggtggcgc aaacagtggc
      901 cgcgctcgcg ctggagtccc gcacggagtc gatcttccac gacgactcct atgggtaccg
      961 gccgggccgg tcgccgctga tggcggtgga taaatgccgc gagcggtgct ggaagaagga
     1021 ctgggtaacc ggtttggatg tccggaaact cttcgactcg gttgatcatg atctgatggt
     1081 cagggcggtg gaggcgaaca tcacccccgg acagcggtgg gtggtgctgt atgtaaaacg
     1141 gtggctgaaa gcaccggtcc tcatgcccga cggcaggctg gccgggcggc accgcgggac
     1201 cccgcagggg tcggcggtat cacccgtcct ggcgaacctg ttcatgcatt atgcgttcga
     1261 ctcgtggctg gagcgcgagt tcccggccgt agagttcgag cggttcgctg acgatgcggt
     1321 ggtgcactgc gcgaccgagc ggcaggcacg gcaagtgctg gacgcgctcg ggcagcggat
     1381 ggcccaggtc gggctggccc tgcacccgga gaaaacgaag atcgtgtact gcaaggaccg
     1441 gaagcggcat ctcagctatg agaccgcgtc gttcacgttc ctggggtaca cgttccgggc
     1501 caggaaagcc ccgacccgcc acgggaggag catgttcgcc gcgttcctcc cggcggtcag
     1561 cagggacgcc ctcaagaaga tggggggcga ggtccgccgc tggcggatca gcctgcgcac
     1621 cacctcggat atcgaggagc ttgccgagtg gatgagtccg gtcatccgcg gctggatgac
     1681 ctactacggc aagttctacc ggaccgagct gaacggtctc ctgcggcgca tcaacaccta
     1741 cctggtgcgc tgggctcgca ggaagttcag gcggctgagg tcgttcaaac gggccagacg
     1801 gtggtggaac gggctgctgc gcaggcagcc tggcctgttc acccactggg cctggatgac
     1861 cgagttctaa cggatcagat gagacgagcg gaatgacggg agactgtcac gttccgttct
     1921 gtgggagccc gggggtgaga tccccccggg ctacccggcc ggctagaggc ggcatggctg
     1981 ccgcctccgg ccggttcggg cggatcggcc ggggctcgga cccgccacgc cttgacccgc
     2041 tacgccttac cggtaggaga gagtggctca ctcgaagccc agggactgct cgtggatgcg
     2101 cttcaggtct cgttcgctga gctcgcggcc gtggcgcagg aagtcacgaa ggaaggccag
     2161 ctgctcctcg gtgtaggggc gaggttcgcg tcgccctcct cggcgatggg gccatacatc
     2221 cgccaagcga gctgcttgat cgaggagtat tacgccgacg actacgtcga ccacaatcca
     2281 caggtgccgc caggccggcg gagaccggca agggcatgca gaggcgcggt gaccccggta
     2341 ggcgctggtg gaggagtgct gcggatactg gcaagcctgc gaccagcggt gacggtggag
     2401 cgggtgacgg gaatcgaacc cgcgtcacga gcttggaagg cagtgtcgag ggggaaggcc
     2461 gctcctgctc cgacgccaaa cggccaggtc agggccgatc ctaacgaacc gtgattgacc
     2521 gctcgtgacc gcccgtatcc cttggttagg gcacgccgag ggcacggccg gtgagggcag
     2581 gactacgatc gggaccccgg gaagtgtccc tggatgctga ggatgacctg gtatggcgct
     2641 gaaaaaacga gtgaccccga aacgctggcg ctccaaggaa gcaaaggaga tcgtcgccgc
     2701 cgttcagagg gcaggcggac aggtggagcg cacggcaagc gggcatctga aggtcatcgg
     2761 gccagccggg tccgccatcg tcgcctcagc ccccaacgcc ggccgcgcag gtgggcgcgc
     2821 cgtccacaac accctggcca caatcagaag caagacaggg ctggaggtgt aaacgctctc
     2881 ggccgggcgt ggtccccacc ccgatgctcg aatcgtcaag cctcggaacc atcaccttac
     2941 gtaagagagc tttccgagcc gtcgcctgac gtacggccat cggcagggaa gccttgtcta
     3001 gctgggcatt cgcttaccgc tgttgtccgt tactgaccgg gcctttctca tcgtctg
//
LOCUS       DASYRV010000172         2167 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_477600, whole genome shotgun sequence.
ACCESSION   DASYRV010000172 DASYRV010000000
VERSION     DASYRV010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2167
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_477600"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..958)
                     /locus_tag="VGQ24_04280"
     CDS             complement(<1..958)
                     /locus_tag="VGQ24_04280"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEV8454081.1"
                     /translation="MPRSVRVLGGIAIGVAAIYPLMYITVALLRVRYPFELEWMEGGT
                     LDHVRRVLNGQPLYVSPSLHFIPFIYPPLFFYVAAVAAKLLGSGFMPLRLVSILASLI
                     SLLLIYRIIRRDGTSPVPALLGACLFAASYRQGGAWLDIARVDSLFLCLVLASFFALR
                     RETAPIRSGLFGGTLLVLAFFTKQAGAFLVPFLLVALAATDWRRLVAFSLPLVLLGGG
                     GALLLDRFTGGWFRYYVFELPQHHPIIGQLLRGFWTSSLLAPFGVALVIGAFHFFAPG
                     CWQRPRLLALDLAFTVGMILCAYLTKIHVGSYDNVVVPAYAAG"
     gene            complement(1018..>2167)
                     /gene="wecB"
                     /locus_tag="VGQ24_04285"
     CDS             complement(1018..>2167)
                     /gene="wecB"
                     /locus_tag="VGQ24_04285"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: protein motif:HMM:TIGR00236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HEV8454082.1"
                     /translation="SGRARRLRIIGSGAAGVGPARQRETVIIAIVVGTRPEIIKMAPV
                     IRACIEYQVPYRIIHTGQHYSFEMDGVFFEELGLPKPDHDLEVGSGSQVYQIGAIVNG
                     IAPLLEAERPDVLLVEGDTNSVLAAALAAHKLGIRVGHVEAGLRSYDRQMPEEINRIL
                     TDHVSDHLFAPTPRARDTLVREGVEASRIHVTGNTVVDELELQRRRATRPEVLARFGV
                     APDRFALATVHRVENVEHPDRLRGIFTGLAAAGRALGVPVLAALHPRTSAKLEGEALE
                     LDCAVRVIPPLGYLDFLALHAQAALMLTDSGGLQEEACCLHVPCVTLRDNTERPESVE
                     VGANMLAGADPERIVEATLTMRSRPRDWPNPFGDGRSGPRIVEILSRR"
BASE COUNT          427 a          673 c          762 g          305 t
ORIGIN      
        1 tacccgccgc gtaggcgggg accacaacgt tgtcgtagct cccgacgtga atcttggtca
       61 ggtaggcgca caggatcatg cctaccgtaa aagcgaggtc gagtgccagg agacgcgggc
      121 gctgccagca acccggagcg aagaagtgaa acgctccgat gacgagcgcc acaccaaaag
      181 gggccagcag actcgaggtc cagaagccgc gcaggagctg accgatgatc gggtgatgct
      241 gcggcagctc gaaaacgtag tagcgaaacc aaccaccggt gaaacggtcg agcaggagcg
      301 ccccgccgcc gccgagtagg acgagaggca gcgagaaggc taccagccga cgccagtcgg
      361 tggcggctaa cgccacgagc aggaagggca ctaggaaggc tccggcctgc ttggtgaaga
      421 acgcgaggac cagcaacgtt ccgccgaaga ggccggaacg aatcggcgcg gtctcgcgcc
      481 tcagcgcgaa gaagctcgcc agcaccaagc agaggaaaag ggaatcgacc cgggcaatat
      541 cgagccaggc accgccttgc cggtagctgg ctgcgaacag gcaggcgccg agcagtgcag
      601 ggaccgggct cgttccgtcg cgccggatga tccggtagat cagcagcaga gagatcagcg
      661 aggccaggat cgacacgagc ctaagcggca tgaaaccgga gcccaagagc ttggccgcga
      721 cggccgcgac atagaagaag agcggcggat agatgaatgg aatgaagtgc agcgacggtg
      781 acacatagag gggttggccg ttcagaacgc ggcgcacatg gtccagtgtg ccgccctcca
      841 tccactccaa ctcgaagggg tagcgcacgc gcagcagcgc caccgtgatg tacatgagcg
      901 ggtagatggc cgcgacgccg atggcgatgc cgcccaggac acgcaccgat ctcggcacgg
      961 ctcccggacg ttcggcgtgt tccgggcggg ccgatgaatg cggttgggcc atgaaggcta
     1021 tctgcggctg agtatctcga cgatccgcgg gccgctgcgt ccgtcaccga acggattggg
     1081 ccagtcgcgc ggtcgtgagc gcatggtcag ggtggcctcg acgatgcgct cggggtcggc
     1141 gcccgccagc atgttggcgc cgacctcgac tgactccggg cgctcggtgt tgtcacgcag
     1201 cgtgacacac gggacatgca ggcagcacgc ctcttcttgg agtccgccgg agtcggtgag
     1261 catcaaggcc gcctgcgcat gaagggccaa gaagtccagg tagcccaggg gcgggatcac
     1321 gcgcacggcg cagtcgagct ctaaggcctc gccctcgagc ttggccgagg tgcgcggatg
     1381 aagcgccgcc agcaccggaa ctccgagggc ccggccggcg gcggcgagac cggtgaagat
     1441 cccgcgcaag cggtccgggt gctcgacgtt ctccacccga tgaacggtgg ccagcgcgaa
     1501 gcggtcgggc gcgacaccaa accgggccag tacctcgggc cgcgtagcgc gccggcgctg
     1561 gagctcgagc tcgtcgacca cggtgtttcc ggtcacgtga atgcgactcg cctccacgcc
     1621 ctctctcacc agcgtgtctc gtgccctggg ggtgggggcg aataggtggt ccgagacgtg
     1681 gtcggtgagg atgcgattga tctcctccgg catctggcga tcataggagc gtaatcccgc
     1741 ctcgacgtga ccgacgcgga tgccgagctt gtgagccgcc agtgccgccg ccagcaccga
     1801 attggtgtcg ccctcgacca gcaagacgtc gggacgctcg gcttcgagca gcggggcgat
     1861 gccgttcaca atcgccccga tttggtaaac ctgggacccc gagccgactt cgagatcgtg
     1921 gtccggcttg gggagtccca gctcctcgaa gaacacgccg tccatttcga acgaatagtg
     1981 ttggccagtg tggatgatcc ggtagggaac ctggtactcg atgcaggcgc ggatgaccgg
     2041 ggccatcttg atgatctcgg gccgggtccc aaccacgatg gcgatgatca ccgtttctcg
     2101 ctgccgggcg gggccgacgc cggccgcacc gctcccgatg atgcggaggc ggcgcgctcg
     2161 gcccgag
//
LOCUS       DASYRV010000173         2827 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3770892, whole genome shotgun sequence.
ACCESSION   DASYRV010000173 DASYRV010000000
VERSION     DASYRV010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2827
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3770892"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..556
                     /locus_tag="VGQ24_04290"
     CDS             <1..556
                     /locus_tag="VGQ24_04290"
                     /inference="COORDINATES: protein motif:HMM:NF019998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEV8454083.1"
                     /translation="NKQLGTTFIYVTHDQEEALTMSDRIAVMDNARVAQLGTPAEIYE
                     SPRTAFVAKFIGESNFFDGTVERRNGGTWDVTRTGGGVFRVPAHPSLREGEPVRIAVR
                     PEWMDVWRPDAVPPGENALPGTIRDIIYLGETMHVIVTVPGTGDVTVAVRNEGQLIKP
                     LLWKRGDPAAVAWLPEDCQVLEGE"
     gene            556..1440
                     /locus_tag="VGQ24_04295"
     CDS             556..1440
                     /locus_tag="VGQ24_04295"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8454084.1"
                     /translation="MAALRQRALGWLYRRPAAQAWALLGPGAFWLAAFFLVPILIMLV
                     YSVMPRGIYGGVERGFTLEHYARFFDPLYLEVLQRTFLWSVACTIICLVLGYPVAYVI
                     VRSGPWRNLLLLLVVLPFWTSFLVRTFALIFLMRDTGLINTWLLKLGIIDQSLTILYT
                     PFAVMIGLIYGFLPFMILPIYASLEKLDESLLEAAEVLGARPSARFRRVTLPLSMPGV
                     VAGCLLVFIPALGSFLTADLLGGAKELMIGNLVQNQFSAARNWPFGSAASFIVMALVL
                     AAVMIYLRVKDSTPARDR"
     gene            1442..2215
                     /locus_tag="VGQ24_04300"
     CDS             1442..2215
                     /locus_tag="VGQ24_04300"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8454085.1"
                     /translation="MKLRTPRWLIVFAGLVYLFLHLPILVLMVFSFNNSKFSVDWRGF
                     TLQWYSRLLERPDILRGLKVSLIVGAAATLISAVLGTLIALALARHQFRGRRAFEGFL
                     YIPIVTPEIVVGISLLILFALLKFPLGVTTITIAHVAFCISFVVVVVLARLEGMDENL
                     EEAALILGADEITTFWKVTVPQLWPGILAGALLAFTMSFDDYVITSFVSGSGSSTLPI
                     VVYGMVRKNVEPSINAISTIILLVTAILIYVADRLVRSR"
     gene            2212..>2827
                     /locus_tag="VGQ24_04305"
     CDS             2212..>2827
                     /locus_tag="VGQ24_04305"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEV8454086.1"
                     /translation="MTAIDRCLWTDGAAGEARESAELPARTDVAIIGGGYTGLAAARA
                     LARRGADATVLEQHTLGWGASGRNGGLVLPGYKPKMEELAKRLGVTRAARMFQLSLEA
                     IQSLSNLISEEGISCDFVRCGAVTLAAKPGHMRGLERSSRFMREQLGYETELLSRDEL
                     AREIESPRYHGGLVDPGGCSLQPAEYARGLAQAAERAGARLLEGA"
BASE COUNT          428 a          900 c          923 g          576 t
ORIGIN      
        1 caacaagcag ctgggcacca ccttcatcta cgtcactcac gatcaagaag aagcgctgac
       61 catgtccgac cggatcgcgg tcatggacaa tgcgagagta gcgcagttgg gcacccccgc
      121 ggagatctac gagagcccgc gcaccgcctt cgtggccaag ttcatcggcg agtcgaactt
      181 cttcgacgga acggtggaac ggcggaacgg cggaacttgg gatgtgacac gcaccggcgg
      241 aggcgtcttt cgggtcccgg ctcatccatc tctgcgtgaa ggcgagccgg ttcgtatcgc
      301 ggtccggccc gaatggatgg atgtgtggcg gcctgatgcc gtgcctccgg gagagaatgc
      361 gctccccggc accatccggg acatcatcta cctgggcgaa acgatgcacg tcattgtcac
      421 cgtcccgggg accggcgatg tcaccgtggc cgtgcgaaac gagggccagt tgatcaagcc
      481 gctgctgtgg aagcggggcg atcccgcggc ggtcgcctgg ttgcccgaag actgccaggt
      541 tctggagggg gaatagtggc cgcgctgcga cagcgggcgc tggggtggct gtaccggcgt
      601 ccagcggcgc aggcgtgggc gctgctggga ccaggcgcct tctggctggc ggcgtttttt
      661 ctggtcccca ttctgatcat gctggtgtac agcgtcatgc cccgggggat ctacggcgga
      721 gttgagcgcg ggttcaccct ggagcactac gctcgcttct tcgatccgct ctatctggag
      781 gtattgcagc gaacgttcct ctggtcggtg gcctgcacca tcatctgcct ggtgctgggc
      841 taccccgtcg cctacgtcat cgtgcgctcg ggcccctggc gcaacctcct gttgttgctt
      901 gtggtgctcc cattctggac cagcttcctg gtgcgcacct tcgccctgat cttcctcatg
      961 cgagacacgg ggttgatcaa tacctggctg ctcaagctcg gcatcatcga tcagtcgctg
     1021 acgatcctgt acacgccttt cgccgtcatg atcggcctga tctacggctt cctgcctttc
     1081 atgatcctgc cgatttatgc ctcactggag aaactggacg agtcgctgct ggaagctgcc
     1141 gaggtgctcg gcgcaagacc gagcgcccgc ttccgccggg tgaccttgcc gctctcgatg
     1201 ccgggtgtgg tggcgggatg tctcctagtc ttcatcccgg cgctgggctc gttcctcacc
     1261 gccgatctgc tgggcggggc caaggagctc atgatcggca acctggtgca gaaccagttc
     1321 tccgccgcgc ggaactggcc gttcggctcg gcggcctcgt tcatcgtgat ggctctggtg
     1381 ctcgcggcgg tgatgatcta cctccgggta aaggattcga cgccggcgcg ggatcgttga
     1441 catgaagctg cggactccac gctggttgat cgtcttcgcc gggctggtct acctctttct
     1501 gcacctaccc atcctggtcc tgatggtctt ttcgttcaac aactccaagt tctcggtaga
     1561 ctggcgaggc ttcaccctgc agtggtattc ccggctcctg gagcggcccg atatccttcg
     1621 cggcctcaag gtgagtctga tcgtaggtgc tgccgccact ctcatttccg cggtgctggg
     1681 gacgctcatt gccctggcgc tggcccggca ccagttcagg gggcggcggg ccttcgaggg
     1741 cttcctctat atcccgatcg tcacgcccga gatcgtcgtc ggcatttccc tgctgattct
     1801 cttcgcgttg ctcaagttcc cgctgggcgt caccaccatc acgatcgccc atgtggcctt
     1861 ctgcatttca ttcgtcgtgg tcgtcgtgct ggcgcggctc gaggggatgg acgaaaacct
     1921 cgaggaggct gccctgatcc tcggcgccga cgagatcacc acgttctgga aggtgaccgt
     1981 gccccagctc tggccgggaa tcctggccgg cgcgctgctc gcgttcacca tgtcgttcga
     2041 cgactacgtg atcacctcat tcgtctccgg ctccggttcg tctacccttc cgatcgtggt
     2101 gtacggcatg gtgcggaaga atgtcgagcc gagcatcaat gccatcagca ccatcatcct
     2161 gctggtcacc gccatcctca tctacgtcgc ggaccggctg gtgcgctccc gttgaccgcc
     2221 atcgaccgtt gtctctggac cgacggggcg gcgggcgagg cccgcgagtc ggcggagctc
     2281 ccggctcgca ccgacgtcgc catcatcggc gggggataca ccggactcgc ggccgcgcgg
     2341 gcactggccc ggcggggcgc cgatgccacg gtactcgaac agcacacgtt aggctggggt
     2401 gcgagcggac gaaatggcgg gttggtgctg ccgggctaca agcccaagat ggaggaactg
     2461 gcgaaacggc tcggcgtaac gcgagcggcc cggatgttcc agctctcgct cgaggccatt
     2521 caaagtctct cgaacctgat ctccgaggag gggatctcct gcgatttcgt ccgctgtggc
     2581 gccgtgaccc tggctgccaa gccgggacat atgcggggtc tggaacggag cagccggttc
     2641 atgcgcgagc agctgggata tgagaccgag ctgctcagcc gggatgagct cgcccgggag
     2701 atcgagtcac ctcgctacca cggtgggctg gtcgatccgg gcggctgctc ccttcagccg
     2761 gcagagtacg cgcgggggct ggcccaggcg gcggagcgag caggagcgcg gctcctggaa
     2821 ggcgctg
//
LOCUS       DASYRV010000174         3770 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_897748, whole genome shotgun sequence.
ACCESSION   DASYRV010000174 DASYRV010000000
VERSION     DASYRV010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3770
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_897748"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..982
                     /locus_tag="VGQ24_04310"
     CDS             <1..982
                     /locus_tag="VGQ24_04310"
                     /inference="COORDINATES: protein motif:HMM:NF017206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NmrA/HSCARG family protein"
                     /protein_id="HEV8454087.1"
                     /translation="KGRFVMPDKKIIAVIGGTGAQGGGVVRAIQADKSGPFVARAITR
                     NPNSEKAQALRAAGVEVVVADIDKPETLGKAFAGAYGAFCVTNFWEHFSPDRELTQAR
                     NMAYAVKAAGVQHAIWSTLEDTRKWVPLEDDRMPTLMGKYKVPHFDAKGEADVTFREL
                     GVPTTLLLTSFYWENLIYFGMGPQRGPDGTLAITFPMDDKKLPGIAVEDIGKCAYAIF
                     KRGGEFINKTVGIAGEHLTGAEMARALTGALGQEVRFNNVPPEVFRSFGFPGADDLGN
                     MFQFKRDFNQYFTGARDLGFTRTLNPALQTFEQWLAEHKEQIPLPADQPA"
     gene            complement(1014..1406)
                     /locus_tag="VGQ24_04315"
     CDS             complement(1014..1406)
                     /locus_tag="VGQ24_04315"
                     /inference="COORDINATES: protein motif:HMM:NF020397.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HEV8454088.1"
                     /translation="MARQFGRAIEEATRLCAQESTEGEIGRRRHLRRLREAIRAAAPA
                     AVEGFSYGIPAFRLNGRPLVYYAAWQQHSSLYPMTAAIRRAHAADLKSYEMSKGTIRF
                     PLTEPPPAALVRRLVKARITELGKKGKT"
     gene            complement(1378..1944)
                     /locus_tag="VGQ24_04320"
     CDS             complement(1378..1944)
                     /locus_tag="VGQ24_04320"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HEV8454089.1"
                     /translation="MARWTFEPGHTAAEFRARHMMVTHVRGAFKNVHGTLNFDPDNPR
                     LSSVEATIDASGIWTGQPQRDAHLRSADFLDVEHYPQITYRGEHVELIGDHDYIVTGE
                     LTIRGVTRSVSLRVIYLGQWQTPWWEEKDGEWIDKGPRLRAGFVATTEINRHDFGVRW
                     NDTMDKGGVVVGDMVSITIDGEAVWEGD"
     gene            complement(2023..2646)
                     /locus_tag="VGQ24_04325"
     CDS             complement(2023..2646)
                     /locus_tag="VGQ24_04325"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEV8454090.1"
                     /translation="MSNDDVYAAGLLNRALDPATQPLQIQAFLRAELDLLHEVVKEGM
                     RVFDVGCGTGRHLILLRDRLRLGVGVDYERSSIAEAAHHAGARHLHFITGDATAIPIV
                     AVFDLAICLTNTWGTMTDKTGVLREMRRLAPQPHTRLLSVYSENSMAARREWYRRLGH
                     AVLEETDEYLVTEGGFRSEHFSDARLRSLIGECTIRPVADIARAVTF"
     gene            2732..3739
                     /locus_tag="VGQ24_04330"
     CDS             2732..3739
                     /locus_tag="VGQ24_04330"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEV8454091.1"
                     /translation="MRKHAAVGQGNHELVLEPGVLSGSDHFDGRRFFNPNGANGQPFW
                     RVPRLLLTRWTRWPSEVSVEPRRPPNPGPGEVVVTFVGHATFLIRVGATNVLIDPVYS
                     RRASPVLFAGPHRARAPGVRFDELPTISLVLLSHNHYDHCDLGTLQRLERRFHPTIVT
                     PRGNGRLLRSAGIRQVEEIDWWESSSAGLLPLTLTPAQHFSARGPLDRNRALWGGFLI
                     EAGGHRIFHAGDSGYGRHFREIAARLGPVDLALLPIGAYEPRWFMKDIHMDPAESVQA
                     HLDLTARQSIAMHFGTFQLTPEGIDEPVRALGNALRERGVPAEQFRTVEVGESVSLGG
                     R"
BASE COUNT          647 a         1184 c         1243 g          696 t
ORIGIN      
        1 gaaagggaga ttcgtcatgc ctgataagaa gatcattgcc gtgattgggg gcaccggggc
       61 gcagggcggg ggagtagtac gggccatcca ggcggacaag agcgggccat ttgtcgcccg
      121 ggccatcacc cggaatccca actcagagaa ggcccaggcg cttcgagcgg ccggggtcga
      181 agtcgtcgtc gccgatatcg acaaacccga gaccctcggg aaggcattcg ctggtgccta
      241 cggcgcgttc tgtgtcacca acttctggga gcacttctca cccgatcggg agctgaccca
      301 ggcccgcaac atggcatacg cggtcaaggc cgccggcgtg cagcatgcga tctggtccac
      361 cctggaagac acccgcaagt gggtgccgct cgaggacgac cggatgccga cgctcatggg
      421 caagtacaag gtgccgcact tcgatgccaa gggcgaggcc gatgtgacct tccgcgagct
      481 cggcgtgccg accaccttgt tgctgacctc gttctactgg gaaaacttga tctatttcgg
      541 catgggtccc cagcggggcc cggacgggac cctggcgatc acttttccga tggacgacaa
      601 gaagctgccc ggcatcgcgg tggaggacat cggcaagtgc gcctatgcca tcttcaagcg
      661 ggggggagag ttcatcaaca agaccgtggg gatcgcgggt gaacacctca ccggtgcgga
      721 gatggcccga gccctcaccg gggcattggg gcaggaggtg cgcttcaaca acgtgccgcc
      781 cgaggtgttt cggagcttcg gcttccccgg cgcagacgat ctgggcaaca tgttccagtt
      841 caagcgcgac ttcaatcaat actttactgg tgcgcgggac cttgggttca cccgcacgct
      901 gaatccggcg ctgcagacct tcgagcagtg gctggcggag cacaaggagc agattccgct
      961 gccggcggat cagccggcgt aggcggtaca gcgctctgcg tcacgagacc ggctcacgtc
     1021 ttccccttct tgcccaactc ggtgatgcgt gctttcacta ggcgccgaac gagcgcagcc
     1081 ggcgggggct ccgtcagggg aaaccggatg gtgcccttcg acatctcgta tgacttgaga
     1141 tcggccgcgt gggctcgccg gatcgccgcg gtcatcggat acaggctgct gtgctgttgc
     1201 caggcggcgt agtacaccag cggtcgtccg ttcagccgga aggcggggat cccgtagctg
     1261 aagccctcga cggcggcggg cgccgcggcg cgaatggcct cgcggagcct tcggaggtgc
     1321 cttcgccggc cgatttcgcc ttcggtactt tcttgcgcgc agaggcgcgt tgcttcctca
     1381 atcgccctcc caaactgcct cgccatcgat ggtgatcgac accatgtcac ccacaacgac
     1441 tccccccttg tccatggtat cgttccacct cacgccgaag tcgtgacgat tgatctccgt
     1501 cgtcgcgaca aagcccgctc gcaacctcgg tcccttgtct atccattctc cgtccttctc
     1561 ttcccaccag ggtgtttgcc attgaccaag atagatcacc ctgagggaga ctgaccgggt
     1621 gacgccccgg atcgtgagct cgccggtgac gatgtaatcg tgatcaccga tcagctccac
     1681 gtgctcgcct cggtaggtga tctgcggata gtgctccacg tcgagaaagt cggcgctgcg
     1741 cagatgggcg tcgcgttggg gctgacccgt ccagatcccg ctcgcgtcga tcgtcgcctc
     1801 gaccgaggac aggcggggat tgtcaggatc gaaattcagc gtgccatgga cgttcttgaa
     1861 ggcaccacgg acgtgcgtca ccatcatgtg gcgggcgcgg aactctgcag cggtatggcc
     1921 tggctcgaag gtccatctcg ccatcagtgc ctcctcttcc ccggcgtttg ggtccgaacc
     1981 ctggcgacgc gccgtcggct gcacaacggg tcaggcggca catcagaacg tgacggcacg
     2041 tgcgatatcg gcgaccggac gaatggtgca ctcgcctatg aggctccgaa ggcgagcgtc
     2101 agagaagtgc tccgaccgga agccgccttc ggttacgaga tattcgtcgg tctcctccag
     2161 cacggcgtgc cccaagcggc gataccattc gcgccgagcc gccatcgagt tttccgaata
     2221 gaccgacagg agccgggtgt gaggctgggg agccagtcgc cgcatctccc tcaggacgcc
     2281 ggtcttgtca gtcatggtcc cccatgtgtt cgtgaggcat atggcaaggt caaacacagc
     2341 cacgatggga atagcggtgg catctccggt gatgaagtgc aagtggcgag cgccggcgtg
     2401 atgcgccgcc tcggctatgg agctacgctc atagtccact ccgaccccga gccggagtcg
     2461 gtccctgagc aggatcagat gccgtccggt gccgcagcca acatcgaaga cccgcatccc
     2521 ttcctttacg acctcgtgca gcaggtcgag ctcggcgcgt aagaaggctt ggatctggag
     2581 cggctgcgtg gccggatcca gagcccgatt gagtaatccg gccgcgtaga cgtcgtcgtt
     2641 cgacatgatt gcctcaagag gcgatgcgct ttcgcggcgg tgttccttgt gccaggcggc
     2701 tcaaccgccg agctttgccg tccagtaaat attgcgcaaa cacgctgccg tcgggcaggg
     2761 gaaccatgaa ctggtgctgg agcctggggt gctgagcggg tccgatcact tcgacggccg
     2821 caggttcttc aatccgaacg gcgcgaatgg ccaaccgttc tggagggtgc cgcgcttgct
     2881 gctcacgcga tggacccggt ggccgtcgga ggtctcagtc gagccgcggc ggccgcccaa
     2941 ccccgggccg ggcgaggtgg tcgtcacgtt cgtcggtcat gccacgtttc tcattcgagt
     3001 cggtgccacc aacgtcctga tcgatccggt gtactccagg cgggcgagcc cggtcttgtt
     3061 cgcgggaccc caccgggctc gggcgccggg cgtgcgattc gacgaactgc ccaccatctc
     3121 gctcgtgctt ctgagtcaca atcactacga tcactgcgat ctcgggaccc tgcagcgact
     3181 cgagcgccgc tttcatccga ccatcgtgac accgcggggc aacggccggc tgctccgctc
     3241 ggcaggcatc cgtcaggtcg aggagatcga ctggtgggag tcctcgagcg ccgggctact
     3301 cccgcttacg ctgacgcccg ctcagcattt ttcggcgcgc ggtccgttgg atcggaaccg
     3361 cgcgctgtgg ggcggcttcc tcatcgaggc cggtgggcac cggatcttcc atgctggaga
     3421 ttcgggctac ggccggcatt tccgggagat cgccgcgcgg ctgggcccgg tcgacctggc
     3481 gctgctccca atcggggcct acgaaccgcg ctggttcatg aaggacatcc acatggatcc
     3541 ggcggaatcg gtgcaggcgc atctcgatct cacggcgcgc cagagtatcg ccatgcactt
     3601 cgggacgttt cagttgacgc cggagggaat cgacgaaccg gtccgcgcgc tggggaacgc
     3661 gttgcgggaa cgcggtgtgc cggcagagca atttcggact gtggaggtcg gggagtcggt
     3721 gtcgctcggc gggcggtgag gcggtaaggc ggtaaggcgg taggtgaggc
//
LOCUS       DASYRV010000175         2110 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2735634, whole genome shotgun sequence.
ACCESSION   DASYRV010000175 DASYRV010000000
VERSION     DASYRV010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2735634"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..757
                     /locus_tag="VGQ24_04335"
     CDS             <1..757
                     /locus_tag="VGQ24_04335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454092.1"
                     /translation="TPTSGSGPHGITVAPDGYVWYTGQGAGLLGRVDPKTGKIVEFAL
                     PDGARNPHTPIVYQGKVWFTDANNNSYGRLDPENGMAKVFQAPTSGSVPYGIVSSPDG
                     FIWIALLGTNKLGRVNPADGTMKEFVLPADGARPRRLQVGGDGTVWYTDYGRGYLGAL
                     DPKTGKVREWKSPSGDAGPYGIAIGTDGRIWYCESRSNSMVAFDPKTEKMESVKIPTA
                     TAIVRHMQTDSTHHRIWLALSGTGRLGKIELGK"
     gene            912..>2110
                     /locus_tag="VGQ24_04340"
     CDS             912..>2110
                     /locus_tag="VGQ24_04340"
                     /inference="COORDINATES: protein motif:HMM:NF044952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase domain-containing
                     protein"
                     /protein_id="HEV8454093.1"
                     /translation="MHSPRGSIALAFSGGLDTSYCVPRLADAGWQVHTVHVDTGGSSS
                     ADLFAIRRQAERVGASRHHEVDARDEVYARFVRFLIQGNVLRGEVYPLSVAAERTQQA
                     LSVVATAREIGARAVAHGSTGAGNDQVRFDVALRVLAPELEIVTPIRDEGIKREQAIA
                     FLTSRGLPVPPKAGAYSINRGLWGTTWGGGWTHDTWAGPPDALLEPPANAPAPREIVI
                     RWQQGLAVGLDGEALGGPALIQRLGEMADSYAIGRNIHVGETALGIKGRIGFEAGAAL
                     LLIGAHRELEKLVLTRWQAFWKDQLARFYGDRLHEGQYFDPSLRDIEALITSSQARVT
                     GETRVRLDAGRFHVVGTRSPHSMMDSSVATYGEENRLWTGDEARAFARVAAVPSLLAA
                     RAANGAPV"
BASE COUNT          350 a          718 c          700 g          342 t
ORIGIN      
        1 cacgcccaca tcgggatcgg gtccccatgg aattaccgtc gccccagacg ggtacgtctg
       61 gtacaccggc cagggggcgg gattgctggg tcgagtcgat cccaagaccg gcaaaatcgt
      121 ggagttcgcg ctcccggacg gagcccggaa cccacacacg cccatcgtgt accagggcaa
      181 agtctggttt accgatgcca acaacaacag ctacggccgg ctcgaccccg agaacggcat
      241 ggccaaggtc tttcaggccc cgacctccgg gtcggtcccc tacggcatcg tgtccagccc
      301 cgatggcttc atctggattg ccctgctcgg caccaacaag ctgggccggg taaatccggc
      361 ggatggcacg atgaaggagt tcgtgctgcc ggccgacggt gcccggcccc ggcggcttca
      421 ggtgggggga gacgggacgg tctggtacac cgattacgga cgcggatacc tgggtgcgct
      481 cgatccgaag acgggaaagg tgcgggagtg gaagtcgccc tcgggggacg ccggtcctta
      541 cggcatcgcc atcggcaccg acgggcggat ctggtattgc gagtctcgca gcaacagcat
      601 ggtagcgttc gatcccaaga ccgagaagat ggaatcggtg aagattccca ccgccaccgc
      661 catcgtccgc cacatgcaga ccgacagcac ccaccaccgg atctggctgg cgctcagcgg
      721 gaccgggcgg ctggggaaga tcgagctggg caaatagcga agcggtcccg aaacaagact
      781 tctcatcccg agcgcagcga gggacctgcc ccggtcattc ggtaccccgg agaaggtccc
      841 tcggtcgcgt cgctccctcg ggatgagatg ccctcttgtg ctccagtccg aataatgcat
      901 acttatgcaa tatgcattct ccacgcggca gcatcgccct cgccttctcc ggcgggttgg
      961 acacctccta ctgcgttcca cgcctggccg acgccggctg gcaggtgcat accgtccacg
     1021 tcgataccgg cggctcctcc tccgctgacc ttttcgctat acgtcgccag gccgagcgcg
     1081 tcggcgcctc ccggcaccac gaggtcgacg cgcgagacga ggtctacgct cgattcgtcc
     1141 ggttcctgat tcaggggaac gtgctccggg gcgaggtcta cccgctcagc gtcgccgccg
     1201 agcggaccca gcaggcgctc tcggtggtgg caaccgcccg tgagatcggt gcccgcgccg
     1261 tggcgcacgg ctccaccggc gccggcaacg accaggtccg ctttgatgtc gccctccggg
     1321 tgctggcgcc cgagctcgag attgtcacgc cgatccggga tgagggtatc aagcgcgagc
     1381 aggcgatcgc gtttctcacc tcgcgcggcc ttccggttcc ccccaaggcc ggtgcctact
     1441 cgatcaaccg cggtctctgg ggcaccacct ggggcggtgg ctggacccac gacacctggg
     1501 ccggcccgcc cgacgcgctg ctcgagcctc cggccaacgc tccggctccg cgcgagatcg
     1561 tcatccgctg gcagcagggg ctcgcggtcg ggctggacgg agaggcgctg ggtggcccgg
     1621 cgttgattca gcgcctggga gagatggcgg actcctacgc catcggccgc aacatccatg
     1681 tcggtgagac ggcgctgggc atcaagggcc ggatcggttt cgaggccggg gccgcgctgc
     1741 tcctcatcgg agcgcaccgc gagctggaga agctggtgct caccaggtgg caggccttct
     1801 ggaaggacca gctggcccgt ttctacggcg accgcctgca cgaggggcag tacttcgatc
     1861 cttcccttcg cgatatcgag gccctgatca ccagttccca ggcgcgggtt accggagaga
     1921 cccgggtacg cttggacgcc ggccggttcc acgtggtcgg gacccgtagc cctcactcca
     1981 tgatggacag ctcggtcgcc acctacggtg aggagaaccg gctctggacc ggtgatgagg
     2041 cacgcgcatt cgcgcgagtc gcagcggtgc cgtccctgct cgcggcgcgt gcagcaaacg
     2101 gagccccggt
//
LOCUS       DASYRV010000176         4297 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2736081, whole genome shotgun sequence.
ACCESSION   DASYRV010000176 DASYRV010000000
VERSION     DASYRV010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4297
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2736081"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..445)
                     /locus_tag="VGQ24_04345"
     CDS             complement(<1..445)
                     /locus_tag="VGQ24_04345"
                     /inference="COORDINATES: protein motif:HMM:NF014629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEV8454094.1"
                     /translation="MEIGIVAVGKLRPYYREAADDYAGRLKRYVTIHEYEVREASRAP
                     NAVAQLAEESRRLEAKIAPGAAIVALTRDGAGWSSRDLAVQLDRWLIASRRVALVIGG
                     SNGLAPSLVARAHSRWSLGPLTLPHELVRVVVLEQLYRAFTILRGE"
     gene            complement(488..1792)
                     /locus_tag="VGQ24_04350"
     CDS             complement(488..1792)
                     /locus_tag="VGQ24_04350"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HEV8454095.1"
                     /translation="MTTVSRPNQDLIRPDKDKFLSEENPFEAMMSRFDYAAQRLSLDP
                     GLYKVLRSPEKQIIVSVPILRDNGETEVYVGYRVLYNTSRGPAKGGIRFDLNVTLDEV
                     KALAAWMTWKCAVVNIPFGGSKGGVVCDPSTMSNPELERVTRRYTAAIIDTLGPDSDV
                     PAPDMNTNERVMAWIMDTYSMHKRHTVTAVVTGKPVEMGGSLGRREATGRGCMLVTRQ
                     ALNRLRMPVQGSRVVVHGFGNVGSVSATLMEQQGMKILAVSDKSGGIYNSKGLKIRDV
                     IQHVRQHRFLSGYPEAEQITNEQLLTLDCDVLVPAALENVITSHNAADVKARIICEGA
                     NGPTTASADKILEENGVFVIPDILANAGGVTVSYFEWVQDRGGYFWDEDTVNQRLERI
                     MVQSFDEVASMAGRHGINMRIGAYMQAIERVAAVHRLRGMYA"
     gene            complement(1822..2862)
                     /locus_tag="VGQ24_04355"
     CDS             complement(1822..2862)
                     /locus_tag="VGQ24_04355"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: protein motif:HMM:NF014645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HEV8454096.1"
                     /translation="MGRRGDRHRLVRWLWTSRRPDARLVRLALLPASGLWRGAMALRE
                     AAYRHGWAGVRDLPLPSVAVGNLTVGGSGKTPIAIWIAHYYVSRGLVPGILLRGYGDD
                     EAQVHQHAVPEAVVVADPDRAVGADRALARGAQVLVLDDAYQRLDVRRDLNIAVISAE
                     TTRAVRWPLPAGPWREGWGALHRADAVIVTRKRATAEAALALAARLQNRVSGPVAIAH
                     LGLRYLEGMVSGRRHPASSLAGKRVVAASGIADPDAFVAQTKATGAAVQVATWKDHHD
                     YREEDVAWLAHAARRADHVVITQKDAVKLRDRWPATVPEPLVAMLDLEWEEGGERIAA
                     ALDTVVTPVEGL"
     gene            complement(2832..3488)
                     /locus_tag="VGQ24_04360"
     CDS             complement(2832..3488)
                     /locus_tag="VGQ24_04360"
                     /inference="COORDINATES: protein motif:HMM:NF015961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEV8454097.1"
                     /translation="MRLKLSPPAARPVIGSVVRALARSWRIRLVHEERWRALHDQGQP
                     VVFLLWHEALLPLLWQHRGQGVAIVVSEARDGQYLSDLAASLGYRAVRGSSTRGGARA
                     LLGAVRELQAGRAIAFTPDGPRGPRREFKPGVIAAAQRGGGVIVPIHAEADRAWRLHS
                     WDRFMIPQPLARVLITYGRPFSVPTGEAGFAEGLEQAALRLNEVSRKDAWVDGAIAIG
                     "
     gene            complement(3479..>4297)
                     /locus_tag="VGQ24_04365"
     CDS             complement(3479..>4297)
                     /locus_tag="VGQ24_04365"
                     /inference="COORDINATES: protein motif:HMM:NF014714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454098.1"
                     /translation="RVAEAAHAAGTKVLYYIAPQLWAWRPGRARRLAAAVDRLAVVLP
                     FEQTFFGELGLRSEYVGHPLVDGKTWPTREQARAQLGVANGSRVLGIFPGSRAQEIRR
                     LWQPFRDAALQLLGEGRCDRILVAGTETGVYPDPGPIQIMRGNAVPLFAAADAALAKS
                     GTTTLEAALAGTPMVVAYKVHPLSWAIFQRLRTVKWVSLVNLVAGREIVPEILQKRAV
                     APELAAALRPLLDRSDPRTLAQREGLALVRERLGQAGAANRVVELAGELLGPCD"
BASE COUNT          709 a         1537 c         1340 g          711 t
ORIGIN      
        1 gctctcccct caggatcgta aaagcccggt agagctgttc gaggaccact acccggacga
       61 gctcgtgggg gagagtcagg ggaccgagac tccaacgcga atgggctcgg gcgaccagcg
      121 aaggggccag gccattggag cccccgatca ccagcgccac ccgccgtgac gcaatgagcc
      181 agcggtcgag ctgcaccgcg aggtcccgac tgctccagcc ggcgccgtct cgcgtcaacg
      241 cgacaatcgc cgctccgggt gcgatcttgg cctcgagtcg cctggactcc tctgccagtt
      301 gagccacggc attcggagcc cggcttgcct cccgcacctc gtactcgtga atggtaacgt
      361 accgcttcag gcgcccggcg tagtcgtccg cggcctcacg gtagtagggc cgcaacttcc
      421 cgacagctac aatcccgatc tccaccggct caccgccccg ctgccccgca gccccgctgt
      481 cccgccttca cgcatacata cctcgcaacc ggtgcactgc tgcgacccgc tcgatcgctt
      541 gcatataggc gccgattcgc atgttgatgc catggcggcc cgccatcgac gcaacctcat
      601 cgaaggactg gaccatgatg cgctccagcc gctgattcac cgtgtcctcg tcccagaagt
      661 agccgccccg gtcctgcacc cactcgaagt agctcaccgt gacgccgccg gcgttagcga
      721 gaatgtcggg aatcacaaag acgccgttct cttccaggat cttgtccgcg ctcgccgtgg
      781 tggggccatt cgccccctcg cagatgattc gcgccttcac atccgccgcg ttatggctgg
      841 tgatgacgtt ctccagcgcg gcggggacca ggacgtcaca atccagggtg aggagctgct
      901 cgttggtgat ctgctcggct tcggggtagc cactgaggaa gcgatgctgg cgcacgtgct
      961 gaatcacgtc tctgatcttg agccccttgg aattgtagat cccgccggac ttgtcgctca
     1021 cggcgagaat cttcattccc tgctgttcca tcaacgtggc cgagaccgac ccgacgttgc
     1081 cgaagccgtg gaccaccacg cggctgccct gtaccggcat ccggagccgg ttgagcgcct
     1141 ggcgggtgac gagcatgcac ccgcgcccgg tagcttcgcg ccggccgagg gaaccaccca
     1201 tctccaccgg ctttcctgtc accaccgctg taaccgtatg gcgcttgtgc atggagtacg
     1261 tatccatgat ccacgccatc acccgctcgt tggtgttcat gtcgggcgcg gggacatcgg
     1321 agtcggggcc gagggtgtcg atgatggcgg cggtataccg gcgggtgaca cgctcgagct
     1381 cggggttgga catggtgctg ggatcgcaga cgacaccgcc cttggagccg ccgaagggaa
     1441 tgttcactac ggcgcacttc caggtcatcc aggcggccag cgccttcacc tcgtcgaggg
     1501 tcacgttgag atcgaagcgg ataccgcctt tggccgggcc gcgggaggtg ttgtagagca
     1561 cccgatagcc cacgtagacc tctgtttctc cgttgtctcg aaggatcggc accgagacga
     1621 tgatctgttt ctccgggctg cggagcacct tgtagagtcc gggatccaga ctcagccgct
     1681 gggccgcata gtcgaagcgc gacatcatcg cctcgaacgg attctcttcg ctgaggaact
     1741 tgtccttatc gggacggatg aggtcctggt tcggacggct gacggtggtc atagaggttt
     1801 cggcgcgctc ccgtgagttg gttacaatcc ttccaccggc gtgacgacgg tgtccagcgc
     1861 agcggcgatc ctctcaccgc cctcctccca ctccagatcc agcatcgcaa cgagcggctc
     1921 cgggactgtc gcaggccacc ggtcccgcag cttcacagcg tctttctggg tgattaccac
     1981 gtggtcagcg cggcgggccg cgtgtgccag ccaggcgacg tcctcttccc ggtaatcgtg
     2041 gtggtccttc caggtggcga cttggaccgc ggcgccggtg gctttggtct gcgccacaaa
     2101 ggcgtcggga tcggcgatcc cggatgcagc caccactcgc ttgcctgcca ggctcgacgc
     2161 gggatgccgt cgcccgctca ccattccctc gagatagcgg agacctaaat gcgcgattgc
     2221 caccggtcca ctgactctgt tctggagcct ggcggcaagc gccagggccg cctcggccgt
     2281 cgcccgcttc cgcgtgacga ttaccgcgtc cgctcggtgc agggcgcccc agccttcgcg
     2341 ccaaggaccg gccgggagag gccaacgcac cgcccgggtc gtctcggcgc tgatcaccgc
     2401 gatgttgagg tcgcgccgga cgtccagccg ttggtaggca tcgtcgagca ccagcacctg
     2461 cgcccctcgc gccagggccc ggtcggctcc gacagcccga tcgggatcgg ccaccaccac
     2521 cgcttccggc accgcatgct ggtgaacctg ggcctcatca tccccatagc cgcgaagcag
     2581 gatccccggc accagcccgc gagacacata gtagtgggcg atccagatgg ctatcggtgt
     2641 ctttcccgat ccgcccaccg tgagattgcc cacagcgacc gacgggagcg gcaggtccct
     2701 caccccggcc cagccgtgcc ggtaggcggc ttctcggagg gccatggccc cacgccagag
     2761 tcccgaggcc ggcaagaggg ccaaccggac cagccgtgcg tccggccggc ggctggtcca
     2821 gagccagcgt actaaccgat ggcgatcgcc ccgtcgaccc atgcatcctt tctggagacc
     2881 tcattgagac gcagcgccgc ctgttccagc ccctcggcaa aaccggcctc accggtgggg
     2941 acactgaatg gacgcccgta ggtaatcagc actctggcca gcggttgggg aatcatgaac
     3001 cggtcccagg aatgtaatcg ccaggctcga tccgcctccg cgtggatcgg cacaatgacc
     3061 ccaccacccc gttgggcagc cgcgatgact cccggcttga actcgcgacg cggcccccgc
     3121 ggtccgtccg gggtaaacgc gattgcacgc ccggcctgta actcccgcac ggcgccgagg
     3181 agcgcgcgtg caccgccccg ggtactcgat ccccgaaccg cgcgataccc cagtgacgcg
     3241 gcgaggtcgg agagatactg cccgtcccgc gcctcgctga ccacgatggc gacgccctgc
     3301 ccccggtgct gccacaacag cggcagcagg gcctcatgcc agagcagaaa caccaccggc
     3361 tgcccctggt catgaagcgc ccgccagcgc tcctcgtgca ccaggcgtat gcgccaggac
     3421 ctggcgagcg cgcgcaccac ggagccgatg accggccggg ccgcaggggg cgacagcttc
     3481 aatcgcacgg acccagcagc tctccagcta attcgacgac ccggttcgcc gcccctgcct
     3541 ggcccaggcg ctctcgaacc agggccaagc cctcccgctg cgccagcgtt cgaggatcgc
     3601 tccggtccag cagcggccga agtgcggctg caagctccgg ggccacggca cgtttctgta
     3661 gtatctccgg cacgatttcc cggccggcca cgaggttgac caggctcacc cacttgacgg
     3721 tgcgcaaccg ctggaagatg gcccagctga gcgggtggac cttgtaagcg accaccatgg
     3781 gcgtgcccgc cagcgccgcc tcgagcgtcg tcgtccccga cttggccagt gcggcgtcgg
     3841 ctgccgcaaa caggggcacc gcattgcccc gcatgatctg gatcggacct ggatcggggt
     3901 agacacccgt ttcggtgccg gccacgagga tacgatcgca ccttccctca cctagcaact
     3961 ggagcgccgc gtcgcgaaac ggttgccaca atcgccggat ctcctgggcc cggctccccg
     4021 gaaagatgcc gagcacccgg ctgccgttgg cgacgccgag ctgcgcccgg gcctgctctc
     4081 gtgtgggcca cgtcttcccg tccaccaacg ggtgacccac gtactcgctg cggaggccga
     4141 gttccccaaa gaacgtctgt tcgaacggaa gcactaccgc tagacggtct accgcggcgg
     4201 caagccggcg agcccggccc gggcgccagg cccagagctg tggcgcgatg tagtacagga
     4261 ccttggtgcc ggccgcatgt gccgcctccg ccacccg
//
LOCUS       DASYRV010000177         2740 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2526656, whole genome shotgun sequence.
ACCESSION   DASYRV010000177 DASYRV010000000
VERSION     DASYRV010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2526656"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..1646)
                     /locus_tag="VGQ24_04370"
     CDS             complement(126..1646)
                     /locus_tag="VGQ24_04370"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HEV8454099.1"
                     /translation="MNQEARDSENEVQTASQQETVDDAPPETGPEWDALLGYLRDARG
                     FDFHGYKLASLARRIRKRMDTVGVDDFALYQDYLEVHPDEFASLFNTILINVTSFFRD
                     PAAWDSVRKLAIPQIMAAKAPGEAIRVWSAGCASGEEACTLAMVLCEELGKDQFRERV
                     KVYATDVDDDALNTARHAAFTDRQLENVPPELVDKYFERSDQLHVFRKELRRQVIFGR
                     HDLINDAPISRIDLLSCRNTLMYLNAETQARVLNRLHFALTDGGFLLLGRAETLMTHG
                     QAFASVDLKRRLSRKGVQGPLRDRLAPLPADPVADVESELDSWVRKAALEASPVAQML
                     VDAAGRVALINDRARALFDLRGGEVGRPLRDLQISYRPVELRSLIEQVETDRRPMVIR
                     EIEWRPQGSEARWLDLNIAPLSDSMGAMIGTLITFTDVTAHRRLQRELERSHQELETA
                     YEELQSTNEELETTNEELQSTVEELETTNEELQSTNEELETMNEELLTEESGDGKN"
     gene            complement(1655..2671)
                     /locus_tag="VGQ24_04375"
     CDS             complement(1655..2671)
                     /locus_tag="VGQ24_04375"
                     /inference="COORDINATES: protein motif:HMM:NF013502.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HEV8454100.1"
                     /translation="MAGRDIVVVGGSAGSIEVLAEFVGGLPPDFPGSVFVVVHFPGSV
                     TSTLPRILSRSGPLSARHPRDGESIEPGRIYVAPPDCHLHVSDGHVRLTRGPKENGHR
                     PAVDPLFRTAALSYGPRVVGVVLSGNLNDGTAGLLRIKQRGGLAIVQDPETALYQGMP
                     RSAIEHVAVDHVLPVQEISALVAQLTSRPAESLEGSGMSDESISDAKADEIAVSDRQR
                     QPGLPSTMSCPECHGVLWEVNDEELVQFRCRVGHAYSAEALLVHQSEQLEAALWTGLR
                     ALEEHSALARRLAARAESRGHRYSASTFTEQAMDAEQHASVIRGVLHSGIRIENGAEV
                     AAAG"
BASE COUNT          465 a          900 c          872 g          503 t
ORIGIN      
        1 ccaggtaccg ctggcgttcg atctggagct ggagctgtgt ggcggcgagc tcctcggcgc
       61 tcatgcggac ctcttcggtc acctgccgct ggccttccgc ggaattggcg ggggtatcgc
      121 ggcgatcagt tcttcccatc acccgattcc tccgtcagta gctcctcgtt catcgtctcc
      181 agctcctcgt tggtcgactg cagctcctcg ttggtggtct ccagctcctc caccgtggac
      241 tggagctcct cgttggtggt ctccagctct tcattggtgg actggagctc ctcgtacgcg
      301 gtctccagct cctggtgcga ccgttccagc tcccgctgga gccgccggtg cgccgtgaca
      361 tcggtaaagg tgatcagcgt cccgatcatg gcgcccatcg agtccgacag gggcgcgatg
      421 ttgagatcga gccagcgagc ctcgcttccc tggggacgcc actcgatctc tctgattacc
      481 atcggccggc gatcggtctc cacctgctcg atgagcgacc gcagctccac cggccggtag
      541 gaaatctgga gatcgcgcag gggacggccc acctcgccgc cccggagatc gaaaagcgcc
      601 cgtgcacgat cgttgatcaa cgctacccgg ccggccgcat ccaccagcat ctgcgcgact
      661 ggactggctt cgagcgctgc cttgcggacc cagctgtcga gctcggattc gacgtctgcc
      721 acaggatccg ccggcagggg ggcgaggcga tctctaagtg ggccctggac gcccttgcgc
      781 gagagccgcc gcttgaggtc gacggacgcg aaggcctggc catgcgtcat caaggtctca
      841 gcccggccga gcaggaggaa ccccccatcg gtgagagcga agtgaagccg gttcaacacc
      901 cgcgcctggg tttccgcgtt caggtacatc aaagtgttcc ggcagctgag caaatcgatc
      961 cgggagatcg gcgcgtcgtt gatgaggtcg tgccggccga agatcacctg cctgcgcagc
     1021 tccttgcgga agacgtgaag ctggtcgctg cgctcgaaat acttgtccac cagttcgggg
     1081 gggacgttct cgagctggcg gtcggtaaac gcggcgtgac gggcggtatt cagcgcgtcg
     1141 tcgtccacgt cggtggcata gacctttacc cgctcacgaa actggtcttt ccccagctcc
     1201 tcgcacagca ccatggccag ggtgcaagct tcctcgccgc tcgcgcaccc cgcgctccag
     1261 acccggatgg cctcgccggg ggcctttgcc gccatgatct gagggatggc gagctttcgc
     1321 accgagtccc atgctgcggg gtcgcggaag aagctggtga cgttgatgag aatggtgttg
     1381 aagaggctgg cgaactcgtc cgggtgaacc tcgagatagt cctggtacag ggcgaagtca
     1441 tctaccccga cggtgtccat ccgcttccga atccgcctgg cgagcgaagc cagtttgtag
     1501 ccatggaagt cgaacccgcg cgcgtcccgg aggtagccga gcagagcatc ccactcggga
     1561 ccggtttcgg gcggagcatc atcgactgtc tcctgctggg aagcggtctg cacctcgttc
     1621 tccgagtctc ttgcttcctg gttcatgact ctccctaccc cgccgccgcg acttcagcgc
     1681 cgttttcgat gcgaataccc gaatgcagga cgccacgaat cacggatgcg tgctgctcgg
     1741 cgtccatggc ctgctcggta aaggtcgagg cgctgtaacg atggccccgg ctctcggccc
     1801 gggccgccag acgccgcgcc agagcggagt gctcttccag cgcacgcaaa cccgtccaca
     1861 acgccgcctc gagctgctcc gactgatgga ccaggagcgc ctcggcgctg tacgcgtggc
     1921 ctacccggca acggaattgg accagctcct cgtcatttac ctcccagagc actccatggc
     1981 actccggaca tgacatggtg gatggcagac cgggctgtcg ctgccggtcg gatacggcga
     2041 tctcatccgc tttcgcatcc gaaatggatt cgtcagacat gccactaccc tccagagact
     2101 ccgcgggacg gctggtcaac tgggctacca gcgcggagat ttcttgaacg gggagtacgt
     2161 ggtctaccgc cacgtgctcg atagcgctcc ggggcatgcc ttgatagagg gcggtttcag
     2221 gatcctgtac gatggccaga ccaccccgct gcttgatcct caacaggccg gcggtgccgt
     2281 cgttcaggtt accggagaga acgacgccaa caacgcgggg cccatagctg agggcggccg
     2341 tgcggaagag cgggtcgacg gccggccgat ggccgttctc cttgggcccc cgggtgagac
     2401 gcacatgacc gtcggatacg tgcaggtggc agtcgggcgg ggctacgtag atccggcccg
     2461 gctcgatgga ctctccatcg cgcgggtgcc tggcggaaag tgggccggac ctgctcaaaa
     2521 tgcgggggag cgtgctcgtc accgagccgg ggaaatgcac gaccacgaac acggagcccg
     2581 gaaagtccgg cggcaggcca ccaacgaact cggcgagcac ctcgatactg ccggctgacc
     2641 cgccgaccac tacaatatcc cgccctgcca ttgtctctcc cggtcgatag gaagctatcc
     2701 tgaagtgcag actagggcaa cgaagcccgg cgtttgtggc
//
LOCUS       DASYRV010000178        11193 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_481144, whole genome shotgun sequence.
ACCESSION   DASYRV010000178 DASYRV010000000
VERSION     DASYRV010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11193
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_481144"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..920)
                     /locus_tag="VGQ24_04380"
     CDS             complement(<1..920)
                     /locus_tag="VGQ24_04380"
                     /inference="COORDINATES: protein motif:HMM:TIGR04474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="three-Cys-motif partner protein TcmP"
                     /protein_id="HEV8454101.1"
                     /translation="MPPRSAVWPIDEHTRGKHLVLGYYLDAWLPILGSTHGRVIFIDG
                     FAGPGKYQGGEPGSPIIAMRAVKRHVARRANWDAAFLFVEADAARCALLRDEVDRERV
                     GLPTTFHFDVECGDFAPTLNKLLDQVATAGFQVAPSFMMVDPFGISGAPMAVIRRFLS
                     LPRAEVLVTFMVDFIDRFDETGEFPPHLDELYGTHEWAGIDTTAAKPLRLAAYCDLYR
                     QQLKVAGATHVLQFDLYSGNRLVYALFHASRHPLACQRMKEALWRADPSGELSFRASR
                     TGQQGLVFGADFSELRGELRSFLSGRDWTPV"
     gene            complement(1197..1547)
                     /locus_tag="VGQ24_04385"
     CDS             complement(1197..1547)
                     /locus_tag="VGQ24_04385"
                     /inference="COORDINATES: protein motif:HMM:NF024057.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide pyrophosphohydrolase"
                     /protein_id="HEV8454102.1"
                     /translation="MERLLTELREFVRERDWEQFHDPKNLAMCLASEVGELLAEYRWI
                     KNEDADQASVDLQRRERITEELGDVGIAWALLCDRLGLDPVYVVRVKLDANRLKYPTK
                     MSRGKPDRPTGPGI"
     gene            complement(1574..2494)
                     /locus_tag="VGQ24_04390"
     CDS             complement(1574..2494)
                     /locus_tag="VGQ24_04390"
                     /inference="COORDINATES: protein motif:HMM:NF024783.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEV8454103.1"
                     /translation="MKAFVAVTDNDWFEFLRQRPELTEVNFWQPSGRHQFRALDPGQP
                     LLFKLHYPQNFIVGGGFFATFSILPLSLAWETFGPQNGVASLAEMRRRTAKYRKESPD
                     PKRDFEVGCIILEDPFYLEQSAWIPAPANFAKEVVVGKGYDLTGAEGRELWNAVLAAR
                     AVGSQRLAEAPTGPMHGEPTLFRPRLGQGAFRVLVTDTYERHCAVTGEKTLPVLEAAH
                     IRPVAQGGLHRIDNGLLLRSDVHTLFDLGYVTVTPEYRFEVSRQLREEWRNGRVYYEL
                     QGRDVWVPKDPVRRPSCLELEWHADTLFKG"
     gene            2816..6262
                     /locus_tag="VGQ24_04395"
     CDS             2816..6262
                     /locus_tag="VGQ24_04395"
                     /inference="COORDINATES: protein motif:HMM:TIGR03491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM0106 family RecB-like putative nuclease"
                     /protein_id="HEV8454104.1"
                     /translation="MQSLQNRLIFSATDLSNFLACPHLILLKRRTALGGPWPRVFADP
                     GVEVLRRRGLEHEQKFLAGLQESGALRIADLTSFSSGPYGLERLERHARATLEAMRDG
                     ADVIYQGLLFDGNWIGYPDFLRKVARPGTLGDWSYEVVDTKLAREARGGALLQVLLYA
                     ELLKAVQGVAPDSVHLALGGPAAPLQSFRVTHYAAYFRSIRKRFLDWVAAAPAELPLA
                     VDPVPHCEICEWDYSCTRERRDVDHLAFVAGITRQQRRALVARGVATLEALGDLDITR
                     TRLEEVKPGALSRIHHQARIQLEGRRQQKLLHELLQPVVPDQGLAALPAPSPGDLFFD
                     LEGDPYAFELGIEYLFGVADARGEYIGRWSLDRARERETFEWFMDFVMSRLQEYPDLH
                     VYHYASYEPAALKRLAGRYDTRIDELDRLLRGKVFVDLYRVVRQGLRASVESYSIKKM
                     EPFYRFERQIDLRQANNALASFEAWLELGGSGDDGNVLLEQIEGYNKDDCVSTLKLRD
                     WLEELRVELARETGAAVPRASAPSAEPPEELAEKLKEIRALMGRLMDGVPDLPEQRSA
                     EQHGRWLVAQMLEYHRRENKSMWWRYFAWLEMSDEELLEDGSALGGLEYMGVVGEVRQ
                     SDIHRYRFPPQEHEIKVGGDTRDPATQKAAGEIVALDETAGTVDLMRGKRSQAPHPRA
                     LFPFDYINDEVLRASLLRLGYAVADQGMERQAPYHSAIDLVMAAPPRAGQPPGTALNG
                     TDESSLDAAIRLVLALDHSVLPIQGPPGSGKTFAGARMILALLRAGRTVGVTATSHKV
                     ISNLLNEVCAKARDTGQKIQGIQKAGEDNRCGAAEIVAIDDNDAMLAALRDGKAQLAA
                     GTAWLWSRESMAASVDVLFIDEAGQFSLANALAVAPAAKSLVLLGDPRQLQQPQQGLH
                     PPGTEVSALDHLLAGQATMPKDRGLFLDQTWRLHPAICAFTSEIYYDDRLRSRKGLEL
                     QRIVGPGALTGSGLRLAAVNHSGRQNESPEEVSAVATLVDHLLNAGLTWITSTREEKP
                     LGLADILVVAPYNAQVAAIRSGLPPGARVGTVDKFQGQEAPIVIYSMASSSAEDAPRG
                     MEFLYSPNRLNVATSRARCLVILLANDRLFLPDCRTPEQMRLANGLCRYLELAQPVQA
                     SP"
     gene            6487..7026
                     /locus_tag="VGQ24_04400"
     CDS             6487..7026
                     /locus_tag="VGQ24_04400"
                     /inference="COORDINATES: protein motif:HMM:NF020897.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEV8454105.1"
                     /translation="MIKQDALRPVDLVIALALAVRRDAPRATFSQLGATLGLSQSTVH
                     EALQTLLLAGLVRPGTREPNRSALQEFVEHGARYAFPPTFGGEVRGVPTAHSGPALRD
                     QFDAGVALVWPDVEGPVRGRALAPLYPQATSLPRRAPEVYNVLTLLDAVRAGRVRERK
                     AALAALHELLTGDRAAVPA"
     gene            7032..7772
                     /locus_tag="VGQ24_04405"
     CDS             7032..7772
                     /locus_tag="VGQ24_04405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454106.1"
                     /translation="MRNLEHPAVRRIARIAAALGDMLSDVVFIGGAIAPLLHSDSPFG
                     EPRPTKDTDAVVASTRYSDVEVLHERLRRRGFRHDPADREHMHRWLSPENDILDLVPA
                     GSHPGGSGQIWDRIALETSAEVDLGIGGKVRYAGAPAFLALKFAAFADRGAEDPFGSH
                     DLEDIFALLAARPSTIAEVRESTAEVREFLVRAATTLTSRTEFEDLLAAHLNNAQDPG
                     LVCERVRLRLQELKTVRVVRPENDDSGA"
     gene            complement(8278..8865)
                     /locus_tag="VGQ24_04410"
     CDS             complement(8278..8865)
                     /locus_tag="VGQ24_04410"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEV8454107.1"
                     /translation="MARARAALVLALIVPSILPAQQGGTPPANPIVTAFRGRIMAMHR
                     NIAQAFDSIPEAKFSYKPTPAQLSIGFIAQHVASDNYLFCNSFGDMKATLPARDTETA
                     DSVRATWPKDSLVTKLKASFTFCQNAFAQLTDATLSDQISVTFGGNARTLTRASMVLG
                     HALDLADHYSQLANYMRLNGILPPSALPRPRPGSD"
     gene            9146..9415
                     /locus_tag="VGQ24_04415"
     CDS             9146..9415
                     /locus_tag="VGQ24_04415"
                     /inference="COORDINATES: protein motif:HMM:NF016268.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HEV8454108.1"
                     /translation="MSFEWDPGKARDNLRKRGVAYADAVGALLDPWASTVSDPHPDEE
                     RYLTLGTDYLERLVVVTWTIRGDRIRIISARRATRSERRRYQGES"
     gene            9417..9701
                     /locus_tag="VGQ24_04420"
     CDS             9417..9701
                     /locus_tag="VGQ24_04420"
                     /inference="COORDINATES: protein motif:HMM:NF025742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HEV8454109.1"
                     /translation="MRKEYDFSKGRRGAVVPVPPGKTRITIRVDDDILDWFRDRVNEA
                     GGGNYQTLINQALRSVMESPRESVERAVRRAVREEIARYEARRPSRAPRS"
     gene            9861..10124
                     /locus_tag="VGQ24_04425"
     CDS             9861..10124
                     /locus_tag="VGQ24_04425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454110.1"
                     /translation="MAMPKKYLQQIGRQGGIKSRRTLDPEAARDMVRVREARRAFRRF
                     RATCFWSYRPDLVIGSADVPWVAEQLRKHGNREAWRVAARLCR"
     gene            complement(10508..>11193)
                     /locus_tag="VGQ24_04430"
     CDS             complement(10508..>11193)
                     /locus_tag="VGQ24_04430"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HEV8454111.1"
                     /translation="DEERGGGVTRRDAIKAAASAAAALPVLDGQADRRTDGQLTQQPA
                     PAAKQAPAPAGGPRGGPWDPDLLHPRPGSWPRLLSAREIATLTVLCDTIIPADEHSPA
                     ASAVGVPAYINEVVSAPYDPQQRDLVRVRGGLAWLNSESRKRFGKPFAGLTAAERTRI
                     CDDICYLPNAKPEFQAAGRFFDLVRDLSATAFYTTREGMADLKYIGNVALPKFEGPPK
                     EVLEKLGLL"
BASE COUNT         1936 a         3658 c         3648 g         1951 t
ORIGIN      
        1 accggagtcc agtctcgtcc agacaagaac gacctcagtt cccctctgag ctcggaaaaa
       61 tcggcaccga atacgagacc ttgctgcccc gttcggctgg cccgaaacga tagttcgccc
      121 gacgggtccg ctcgccaaag agcttccttc atccgttggc acgccagcgg atgccgcgat
      181 gcgtgaaaga gggcgtaaac caaccgatta ccgctataga gatcgaattg aaggacgtga
      241 gtcgctccag ccaccttcag ctgttggcga tacagatcgc agtacgccgc gaggcgcagt
      301 ggcttggccg ctgtcgtatc gatgccggcc cactcatggg tgccgtacag ttcatccagg
      361 tggggcggga actcacccgt ctcgtcgaat ctatcgatga agtccaccat gaacgtgacc
      421 aagacttccg ccctcggcag cgagaggaac cttcgaatca cagccatcgg tgcgccggag
      481 atcccgaagg ggtccaccat catgaagcta ggcgcgacct ggaatcctgc cgttgccacc
      541 tggtcgagca gcttattcag cgtgggcgca aagtccccac actcgacgtc gaagtgaaac
      601 gtggtcggca ggccgacccg ttcccgatca acctcatctc ggagaagcgc acagcgcgcg
      661 gcgtcggctt cgacgaagag aaaggccgcg tcccagttgg cgcggcgggc gacgtgcctc
      721 tttacggcac gcatggcgat gattggggat cctggctctc ctccctggta tttcccaggg
      781 ccggcgaaac catcgatgaa gatcacccgg ccatgtgtac tgccgagaat cggcagccag
      841 gcgtcaagat agtaccccag caccaggtgc ttaccacggg tgtgctcgtc aatgggccag
      901 acggcggacc gaggaggcat tgggggtgta aaggaacttg atcgcagtca cgtatctgtc
      961 ggccaaatgt agtctccaga tctgcggaca gttaccccct ggaagccaaa ccggtgtcca
     1021 tcgctctaat tcggtaggaa cctgaagccg taccgatggt catctatcag gataggagga
     1081 gcacacagac cgcagagcag ccccggggct ctacggacac ggaggaaggg gtgctgcccc
     1141 aggcaacaac tgaaagggcg caggcagccg cctcacgagg cacagaatag ccctggtcag
     1201 attcctggac cagttggtcg gtccggcttt cccctgctca tcttagtcgg gtatttcaat
     1261 ctattcgcgt cgagtttcac tcggaccacg taaacaggat caagcccgag tctgtcgcat
     1321 aagagagccc acgcaatccc gacgtcacca agttcttcgg tgatccgctc ccgcctctgg
     1381 aggtcaacag aagcctgatc ggcatcttcg ttttttatcc accggtactc cgcgagcagc
     1441 tctccgacct ccgaagccag gcacatcgcg aggttctttg ggtcatggaa ctgctcccag
     1501 tcccgctccc gcacgaactc gcggagctcc gtgaggagcc tctccatctg atccgagcta
     1561 acggacatcg gggtcatcct ttaaagagcg tgtcagcatg ccactcgagc tccagacagc
     1621 tcggccgtcg gacagggtcc ttcggcaccc aaacgtcgcg accctggagc tcgtagtaga
     1681 ccctgccgtt cctccattct tcgcggagct gcctgctcac ttcgaatcgg tattccggcg
     1741 tcaccgtcac gtacccgaga tcgaacagtg tgtggacgtc ggagcgaaga aggagaccat
     1801 tgtcaattcg atgaagtccg ccctgggcga ccggccggat gtgagcggcc tcgagtactg
     1861 gtagggtctt ctcgcccgtc acagcacagt gccgctcgta ggtgtcggtg accaggactc
     1921 ggaatgcgcc ttggccgagc cgcggccgga agagcgtggg ctcgccatgc atcgggccgg
     1981 ttggcgcctc tgctaaccgt tgtgagccaa cagcccgagc tgcgaggacc gcgttccaga
     2041 gttcccgacc ctcggcgccg gtgaggtcat agccctttcc gacgactact tccttcgcga
     2101 agttcgccgg cgcgggaatc caggcggatt gttccaggta gaaaggatcc tcgaggatta
     2161 tgcacccgac ttcgaaatct cgcttcggat ctggcgactc cttccgatat ttcgccgttc
     2221 ggcgccgcat ttcggcgagg ctagcaactc cgttctgcgg cccgaaggtc tcccacgcca
     2281 ggctgagcgg caggatcgag aacgtcgcga agaatccgcc gcccacgatg aagttctggg
     2341 gatagtggag cttgaagagc agcggctggc ctggatcgag cgcgcggaac tgatgtcggc
     2401 cgctcggctg ccagaaattg acctcggtca gctcgggccg ctgccgcagg aattcgaacc
     2461 agtcgttgtc ggtgactgcg acgaaggctt tcacgccgcc ccggatctct caaaccggtc
     2521 cttgagatac ttgctctttg gcctgagcgc agcactcccc ggcacgtgaa tcagcaccct
     2581 ggcgttagaa cgaccgggcg aggatctagc gaacgcgggg cgccagcaat aatagactcg
     2641 acctggagag ggcggtatgc tgcagcccgg gtctcggacc ccgatcctag cttctggggt
     2701 gctccccggg ccggccggac cccgccgatg cggcggtcga gaggggggag cccccagcaa
     2761 aggagacacc ggatgcacgc tgctgtgccg gccgagcagg agtgcgagcg ctgacatgca
     2821 atccctccag aacagactca tcttctctgc cacggacctc agcaacttcc tcgcctgccc
     2881 ccacctcatc ctcctcaagc gccggacggc ccttggcggg ccctggccca gggtattcgc
     2941 cgatccgggc gtggaggtcc tgcgccggcg cggcctggag cacgagcaga agttcctggc
     3001 gggtctacag gaaagcggtg ctctccggat cgcggatctc accagcttct catcggggcc
     3061 gtacggactc gagcggctcg agcgccacgc cagggccacc ctcgaggcga tgcgcgacgg
     3121 cgccgacgtc atctaccagg ggctgctgtt cgatggaaat tggatcggct atcccgactt
     3181 cctccgcaag gtcgcccgcc ccggcacgct cggcgactgg tcgtacgaag tcgtcgatac
     3241 caagctggcg cgggaggcca ggggcggcgc gttgctccag gtcctgctgt acgccgagct
     3301 gctgaaggcc gttcagggtg tcgcaccgga ctccgtccat ctcgccctgg ggggtccggc
     3361 agccccgctt cagagctttc gcgtcaccca ctacgccgcc tacttccggt ccattcgcaa
     3421 gcgattcctc gactgggtcg cggcggcgcc ggccgagttg ccgctggcgg tcgacccggt
     3481 accgcactgt gagatctgtg aatgggacta ttcctgtacc agggaacggc gcgacgtgga
     3541 ccacctcgcc tttgtcgccg gcatcacccg gcagcagcgc cgcgcgctgg ttgcacgggg
     3601 agtcgcaacc ctggaagcgc tgggcgatct tgacataacc cgcactcggc tcgaagaggt
     3661 gaagcccggg gcgctcagtc gcattcacca ccaggctagg attcagctgg agggccggcg
     3721 gcagcagaaa ctcctccacg agctgctcca accggtcgtg cccgaccagg gcctggccgc
     3781 actgcccgcg ccctccccgg gcgatctctt cttcgacctg gagggcgacc cctacgcctt
     3841 cgagctgggg atcgagtacc tgttcggcgt tgccgacgcc aggggcgagt acatcggccg
     3901 ctggtcgctc gatcgggcca gggagcggga gaccttcgag tggttcatgg atttcgtcat
     3961 gagccgcctc caggagtacc cggacctgca tgtctaccac tacgcctcct acgagccggc
     4021 ggcgttgaag cggctggcgg gccgttacga cacccgcatc gatgagctgg accggctcct
     4081 tcgaggcaaa gtattcgtcg atttgtaccg ggtggtccgg caggggcttc gggcgtcggt
     4141 ggagagctac tccatcaaga agatggagcc gttctaccgg ttcgagcggc agatcgatct
     4201 ccgccaggcc aataacgcgc tcgccagttt cgaagcgtgg ctcgagctgg gcgggtccgg
     4261 cgatgacggg aatgtcctgc tcgagcagat cgagggatac aacaaggacg actgtgtctc
     4321 gaccctcaag ctccgggact ggctggagga gcttcgcgtt gagctcgcca gagagaccgg
     4381 cgccgcggtt cctcgggcga gcgcgccgtc cgccgagccg cccgaggagc tggcggaaaa
     4441 gctcaaggag attcgcgccc tgatgggccg gctcatggac ggcgtgccgg acctccccga
     4501 gcagcgctca gccgagcagc acggccgctg gctggtggcc cagatgctcg agtaccatcg
     4561 ccgggaaaac aagtcgatgt ggtggcgata cttcgcctgg ctcgaaatga gcgacgagga
     4621 gctgctcgag gatggctcgg ccctcggcgg attggagtac atgggtgtcg tgggtgaggt
     4681 gagacagtcg gatatccatc gctaccggtt cccgccccag gagcacgaga tcaaggtggg
     4741 tggcgatacc cgcgacccgg cgacccagaa ggcagcgggc gaaatcgtcg ccctggacga
     4801 aaccgccggt accgtggatc tcatgcgcgg caagcggagc caggcgcccc atccccgagc
     4861 gcttttcccg tttgactaca tcaatgacga ggtgctgcgc gcgagtctgc tccgtctggg
     4921 ctacgccgtt gccgaccaag ggatggaacg gcaggcgccg tatcattccg ccattgatct
     4981 ggtcatggct gccccacctc gagctggtca accgcccggt accgctctca acgggacgga
     5041 tgagtcctca ctcgacgctg cgatccggct ggttctcgcg ctggaccatt cggtgctgcc
     5101 gattcagggc ccgccgggtt ccggcaagac gttcgccggg gcgcgcatga tcctggcgct
     5161 gttgagagcc ggcaggacgg ttggagtcac cgcgaccagc cacaaggtga tctccaacct
     5221 cctgaatgag gtgtgcgcga aagcccgtga caccgggcag aagatccagg gaatccagaa
     5281 agcgggtgag gacaaccggt gcggagcggc ggagattgtc gccatcgacg acaacgatgc
     5341 catgctggcg gcccttcggg acggcaaggc gcagctcgcc gcggggacgg cctggctctg
     5401 gagcagggag agcatggcgg cttcggtgga tgtgcttttc atcgatgaag ccgggcaatt
     5461 ctctctggcc aacgccctcg ccgtggcacc cgctgcgaag agtctggttc tcctgggcga
     5521 cccccggcag ctccaacagc cgcaacaggg cctccatccg ccgggaaccg aggtgtcggc
     5581 cctggatcac ctgctggccg gtcaggcgac gatgccgaag gatcgcggtc tcttcctcga
     5641 tcagacctgg cggctgcatc ctgcgatctg tgcctttaca tcggagatct actacgacga
     5701 ccggctgcgt tcccggaagg gtctcgagct gcagcgcatc gtcgggccgg gagcgctgac
     5761 cggaagcggc ctccgcctgg cggcggtgaa ccattcgggt agacagaacg aatcgccgga
     5821 ggaggtctcc gcggtggcca cgctggtcga ccatctgctg aacgccggcc tcacctggat
     5881 cacctcgacg cgggaagaga agccgctcgg cctggcggac attctcgtcg tggcgccgta
     5941 caatgcgcag gtagccgcca tccggagcgg gcttccaccc ggggctcgag tgggcacggt
     6001 ggacaaattc cagggacagg aggccccgat cgtcatctac tcgatggcga gctccagcgc
     6061 ggaggatgcg ccgagaggga tggagtttct gtacagtccg aatcgtctca acgtcgcgac
     6121 ttcgcgggcg cgttgcctgg tgatcctgct ggcgaacgat cggctcttcc tgccggattg
     6181 caggaccccc gagcagatgc ggttggccaa tgggctgtgc cgctacctgg agctggcgca
     6241 gccggtacag gcgtcgccat aggcgtccat tcagcgcgcc caccgcaagg gtctgtccca
     6301 tgccgtgagg gttatgcctt ggacggcata ttctgaaaaa gtgccccaga acgacacctg
     6361 attccacttc ccgccggcct ctccaggtgc tcaccggcca ttgcgtaagt caattgtttg
     6421 cagtagtatt gtctattcgc gaatagcgaa tagactcgcg atgtatggca caggaggcca
     6481 cccgtgatga taaaacagga cgccctccga cccgtggatc tggtcatcgc cctcgcgctc
     6541 gcggtgcgta gggacgcgcc cagggcgacg ttcagccaac tgggggcgac gctcggcctg
     6601 agtcagagca cagtccacga ggcccttcag acgctcctgc ttgccggatt ggtccggccg
     6661 gggacccgtg agcccaatcg gtcggcgctg caggagttcg tcgagcacgg ggctcgatat
     6721 gcattccccc ccaccttcgg cggagaagtc aggggagtac caaccgctca ttctggcccg
     6781 gccttgcgcg accagttcga tgccggagtc gccctggtgt ggcccgatgt ggagggcccg
     6841 gtgcgcggaa gagcactcgc cccgttgtat ccccaggcga cttctctacc gcgccgggcg
     6901 ccggaggtct acaacgtcct cacgctcctg gacgccgtac gggcgggacg agtccgtgaa
     6961 cggaaggcgg ccctcgccgc cttgcatgag ctgctgacag gagaccgggc ggcggtgccg
     7021 gcgtagagtt catgcggaac ctcgagcatc ccgcggttcg gcgcattgcc cgaatagcag
     7081 ccgccctggg tgacatgctg tcggacgtcg tgttcatcgg gggcgcgatc gctccgttgc
     7141 tgcactcgga ctcgcccttc ggcgagccga ggccgacgaa ggataccgac gccgtggtgg
     7201 cctcgaccag gtactccgat gtcgaagtct tgcatgagag gctccgccgg cgcggcttcc
     7261 gccacgatcc agcggaccgg gagcacatgc accgttggct gagccccgag aacgacatcc
     7321 tggacctggt ccccgcgggc tcgcaccccg ggggaagtgg gcagatctgg gaccggatcg
     7381 ccctggagac cagcgccgag gtggacctgg gaatcggcgg caaggtccgg tacgccggcg
     7441 ctcccgcctt tctggccctc aagtttgcgg cattcgccga tcgtggagcg gaggatccgt
     7501 tcgggagtca cgatctcgaa gacatattcg ccttacttgc ggcccggcca tccacaatcg
     7561 ccgaggtgcg ggaaagtacg gccgaagtca gagaattcct ggtgagagca gccaccacct
     7621 tgacgagcag gaccgagttt gaagatctcc tcgcggccca cttgaacaac gcgcaggacc
     7681 ccggactcgt gtgcgagcgg gttcgtctgc ggcttcagga gctgaagacg gtgcgtgtcg
     7741 tccggccgga gaatgacgac tcaggagcct gattcaaccg ccccgttgca ggtattctta
     7801 caggaccggc caaacgcgag ctcccgatta cgacgatctg gccggtccgc cgcggtgaag
     7861 acttcgcccg gctggtaacc gcctgtccga gagcgcggcg atgacgtaca aagaactcga
     7921 cacagtagtc ttgacgcggg accttccaga gcatggcctc aagaccggag accttggcgc
     7981 cgtcgtcctt gtctcgtctg gcaacggcac gcttgaggtg gagttcgtgc gcgcctcagg
     8041 ccagacccag gcagttgtca ccttgccgct ggaatctgtc cgacccgtcc aggatgagga
     8101 cctcatagct gttcggagag ttcctccgaa tacccacggg actgcctagc gagcaggtgc
     8161 aggcgaagcc gcccacgttc agccgcacta ccgcacccgc cggcgcctcg ccgttcgaca
     8221 gcggcctcct caatcccggc gaccgcgcca cgctcacgtt gagcgctccc gacccgctca
     8281 gtcgcttccc ggcctggggc gtggcagcgc gcttggcggc aggatgccgt tcagccgcat
     8341 gtagttcgca agctggctgt agtgatcggc caggtcgagg gcgtggccaa ggaccatgct
     8401 cgcccgggtc agggtccgcg cgttgccgcc gaacgtgacg ctgatctggt cgctcaaggt
     8461 cgcgtcggtg agctgggcga aggcgttctg acagaacgtg aacgaggcct tgagcttggt
     8521 gaccagcgag tccttgggcc aggtggcacg gaccgaatcc gcggtttcgg tgtccctggc
     8581 cggcagtgtg gccttcatgt ccccgaagct gttgcagaag aggtagttgt cgctggccac
     8641 gtgctgcgcg atgaacccga tgctgagctg cgcgggagtc ggcttgtagg aaaacttcgc
     8701 ttcggggatc gaatcgaagg cctgggcgat gttccgatgc atggccatga tgcgtccccg
     8761 gaaggccgtg acgatcggat tcgccggcgg tgtgccccct tgttgcgcgg gcagtatgct
     8821 cggaacgatc agggccagaa ccagtgctgc tcgcgcgcgc gccatgatgc tctccggctg
     8881 aaggaaaggt tggacgactg atacaaggtg cgcgaccaga tgccggctgt ccagcgccga
     8941 ccgcagcccg cgaacctcgc ctggtcggac aagaggaaag gttcggagtt cgcgcaattc
     9001 cgtcctcctg ccgcgacgat tcggtgatgt cctccgcagt cgcgctcgcc atctcctcct
     9061 gaatccgtcg gaccctgagg gcctgagtgg ccgtccgcgc ggtcggtcgg gtccttgtgc
     9121 cggtgcacaa tcgtacatac cattcatgag cttcgagtgg gatccgggca aagctcgcga
     9181 caatctccgg aagcgcggcg tggcctacgc cgatgcggtc ggcgccttgc tggatccctg
     9241 ggcctcgacg gtcagcgatc cgcacccgga cgaggagcgc tacctgacgc tcgggaccga
     9301 ttacctcgaa cggctcgtgg tcgtgacctg gacgatccgg ggtgaccgca tccgcatcat
     9361 ctcggcgcgc cgggccaccc ggtccgagcg acgccgttac cagggggaga gctgatatgc
     9421 gtaaggagta cgacttttcg aaaggccgcc gtggcgccgt cgtcccggtt ccgcccggga
     9481 agacgcgcat caccatccgt gtcgacgacg acattctcga ctggttccgc gaccgggtga
     9541 acgaagccgg cggcggcaac taccagaccc tgatcaacca ggcccttcgg agcgtcatgg
     9601 aatcgccgcg ggaatcggtg gagcgggcag tccggcgggc tgtccgcgag gagatcgccc
     9661 gatatgaggc tcggcgcccg tcgcgggccc cgaggtcctg acggtccccg gagcggtcgc
     9721 cgctcggcac cccgaacggc tcgtcgagcg agggttcccc ggttgaggcg tggtattctg
     9781 ctttccaaac ctcctgagct atcatcgatt aactagctga aacacatcga cttcccatcg
     9841 taagcggctt atgatcggtc atggcgatgc ccaagaaata cctccagcag atcggccggc
     9901 agggagggat caagagccgc cggacgctcg accccgaggc cgcccgggac atggtcaggg
     9961 tgcgggaggc ccgtcgcgca ttccgtcggt ttcgcgcgac ctgcttctgg tcctatcgtc
    10021 cggatctcgt catcggaagc gcggacgtcc cgtgggtggc cgagcagctc cgcaaacacg
    10081 ggaatcgcga ggcgtggcgg gtggcggcac ggctatgccg ctgaccgaat tccagggccg
    10141 gctcctggcc gagcttgccg cgaccccgaa cgatgcgcgc taccttgccg gaggagcggc
    10201 gctgcacttc gcgccgaatt cgacacgcta cagcgacgcc ctcgatttct tccacgattc
    10261 cgaggcgcgg gttgcggccg cgttcgccgc ggatcgcacc cggctcgagg cgctcggcta
    10321 cgcggtccag gtcgagctga gcctccccgg attcgtgcgg gcggtcgtgg cgcgcaacgc
    10381 cgacgagacc cgcatcgact gggcccacga ttccgcctgg cgcttcatgc cgctggtccg
    10441 atgcacaacc tgttcgatcc ggtggtcccc tacgggcagg aggcgctcta cgccgcgggc
    10501 ggggggctta cagcagcccg agcttctcca gcacctcctt cggcggcccc tcgaacttgg
    10561 gcagcgccac attcccgatg tacttgaggt cggccatccc ctctcgcgtg gtgtagaacg
    10621 ccgtcgcact caggtcccgc accaggtcga agaacctgcc cgccgcctgg aactccggct
    10681 tggcgttggg cagatagcag atgtcgtcgc agatccgggt tcgctcggcc gcggtgagcc
    10741 ccgcgaacgg cttcccgaac cgcttccggc tctcgctgtt gagccaggcg agcccgccgc
    10801 gcacccgcac caggtcccgc tgctgcgggt cgtagggcgc gctcaccacc tcgttgatgt
    10861 aggccggcac ccccaccgcg ctcgccgccg gcgagtgctc gtccgccgga atgatggtgt
    10921 cgcagagcac ggtgagcgtc gcgatctcgc gcgcggagag gagccggggc cagctccccg
    10981 gcctggggtg cagcagatcc gggtcccacg gcccgcccct cggcccgccg gcgggggcgg
    11041 gcgcctgctt cgcggccggc gcgggctgtt gagtcaactg tccgtctgtc cgcctgtccg
    11101 cctgtccgtc caacaccggc agcgccgccg ccgcagaggc agcggccttg atcgcgtctc
    11161 gccgggttac gccccccccc cgctcctcgt ccg
//
LOCUS       DASYRV010000179         3728 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1520476, whole genome shotgun sequence.
ACCESSION   DASYRV010000179 DASYRV010000000
VERSION     DASYRV010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3728
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1520476"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..252)
                     /gene="rpsS"
                     /locus_tag="VGQ24_04435"
     CDS             complement(<1..252)
                     /gene="rpsS"
                     /locus_tag="VGQ24_04435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009001861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEV8454112.1"
                     /translation="MGRSLSKGPFVDPHLLEKVEELNASRQKRVVKTWSRRSTVLPEF
                     VGHTLAVHNGKKFIPVYITENMVGHKLGEFAATRLFRGHG"
     gene            complement(261..1082)
                     /gene="rplB"
                     /locus_tag="VGQ24_04440"
     CDS             complement(261..1082)
                     /gene="rplB"
                     /locus_tag="VGQ24_04440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001738551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEV8454113.1"
                     /translation="MGVKSLKPTSAGRRFMTVLTFDEITKTSPEKRLVVTKKRTGGRN
                     AQGRITTRHIGGGHKRKIRLVDFRRDKLGIPAKVAAIEYDPNRSARLALLYYRDGEKR
                     YIIAPLGLKVGDTVMSGPTADILPGNALPLRSIPAGTTVHNIELTPGKGAQLCRSAGT
                     GAQLVAKEGEMAHIKLPSGELRLIQMNCTATIGQVGNLDHENISIGKAGRSRWLGIRP
                     TVRGVAMNPVDHPMGGGEGRGKGNHPMTPWGKPTKGAKTRRRKPSDRYIVARRRK"
     gene            complement(1093..1380)
                     /locus_tag="VGQ24_04445"
     CDS             complement(1093..1380)
                     /locus_tag="VGQ24_04445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008343846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEV8454114.1"
                     /translation="MRDPRQVVLRPLVTEKATTLKDAHNQVSFQVAMDANKVQVRQAV
                     EAIFKVKVTGVRTQVVFGKEKRMGRHLGRRPSWKKAVVTLGPGSKIELFES"
     gene            complement(1377..2006)
                     /gene="rplD"
                     /locus_tag="VGQ24_04450"
     CDS             complement(1377..2006)
                     /gene="rplD"
                     /locus_tag="VGQ24_04450"
                     /inference="COORDINATES: protein motif:HMM:TIGR03953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEV8454115.1"
                     /translation="MATINVLDQTGKPSGTLELADAVFAAPANGPLVHQAVVRELAGR
                     RAGTHDTKGRSEVSGGGKKPWRQKGTGRARQGSIRATQWKGGGKPFGPTPRSYAQDMP
                     RQARRAALRASLSDKLAAGQVTVIEELRLAEPKTKAMLALLGGLGLTEEPTLLVVANI
                     TEALDRGSRNLRWLSVVRPGQVSVAELLRHRRVVFDRPALVRLQESLLS"
     gene            complement(2011..2688)
                     /gene="rplC"
                     /locus_tag="VGQ24_04455"
     CDS             complement(2011..2688)
                     /gene="rplC"
                     /locus_tag="VGQ24_04455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016293507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEV8454116.1"
                     /translation="MGKALTVGLIARKRGMTQVFGDDGNAVPITVLEAGPCSVVQVKT
                     QATDGYEALQIGFEPKRKKVGKPMAGHFKKASVAATRVLREVRLKSVEGYQVGQTLTV
                     ELFKPGELVDVTGVTKGKGFQGGVKRYGWYGGDATHGSMFHRAPGSIGASSDPSRVYP
                     GHHLPGRMGADRVTVPHLEVVRVMPEQNLLLIKGAVPGPTGALIVVRKSVKLSKAQQR
                     TVKAAKK"
     gene            complement(2714..3118)
                     /locus_tag="VGQ24_04460"
     CDS             complement(2714..3118)
                     /locus_tag="VGQ24_04460"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEV8454117.1"
                     /translation="MTIEAAADLEAQQKGTLADLLGIRFLEVGRDKVVAELTIRDELK
                     TVGGALHGGTIMAFADTVGATATVLNLPPGAGTTTLESKTNFFAAGRSGAVRAESVPL
                     HRGKRTMVWQTRITDEAGRLLAQTIQTQMVLT"
     gene            complement(3200..3517)
                     /gene="rpsJ"
                     /locus_tag="VGQ24_04465"
     CDS             complement(3200..3517)
                     /gene="rpsJ"
                     /locus_tag="VGQ24_04465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008933160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HEV8454118.1"
                     /translation="MAILADQKIRIRLRAYDHRLLDRSVKEIVETVRRTGARVAGPVL
                     LPTAINRWTVLRSPHVDTKSREQFEIRTHKRLLDILDPTPQTVDALMKLDLPSGVDVE
                     IKL"
     gene            complement(3536..>3728)
                     /gene="tuf"
                     /locus_tag="VGQ24_04470"
     CDS             complement(3536..>3728)
                     /gene="tuf"
                     /locus_tag="VGQ24_04470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003640798.1"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEV8454119.1"
                     /translation="YFRTTDVTGVCTLPAGVEMVMPGDNVAMDVALITPTALEKELRF
                     AIREGGRTVGAGVVTEISE"
BASE COUNT          507 a         1349 c         1214 g          658 t
ORIGIN      
        1 gccgtggccg cggaacaacc gcgtggccgc gaattcgccc agcttgtggc ccaccatgtt
       61 ctcggtgatg tagacgggga tgaacttctt gccgttgtgg acggccaggg tgtggcccac
      121 gaactcgggg agcaccgtcg agcgccggga ccaggtcttg acgacccgct tctggcgcga
      181 ggcgttgagc tcttctacct tctcgagcag gtgcggatcc acgaacgggc ccttgctgag
      241 cgagcgtccc acggctcccc ctacttccgc cgccgcgcca cgatgtagcg gtcggacggc
      301 ttccgccgcc gcgtcttggc gcccttggtc ggctttcccc acggcgtcat gggatggttg
      361 cccttgccgc gaccctcgcc gccgcccatc gggtggtcca ccgggttcat cgccacgccc
      421 cggaccgtcg gccggatgcc cagccagcga gagcggccgg ccttgccgat cgagatgttc
      481 tcgtggtcga ggttgccgac ctggccgatg gtggccgtgc agttcatctg gatcaagcgc
      541 agctcaccgg aggggagctt gatgtgcgcc atctccccct ctttggccac cagctgagcg
      601 ccggtccccg cgctccggca gagctgggcg cccttgccgg gcgtcaactc gatgttgtgg
      661 acggtggtgc cggccgggat gctgcgaagc ggcaatgcgt tgccgggcag gatgtccgcg
      721 gtcgggcccg acatcacggt gtcgcccacc ttgaggccga ggggagcgat gatgtagcgc
      781 ttctcgccgt cccgatagta gagaagggcc aggcgggccg agcggttggg atcgtattcg
      841 atggccgcca ccttggccgg gatcccgagc ttgtcccggc ggaagtcgac cagccggatc
      901 ttccgcttgt ggccaccgcc gatgtgccgg gtggtgatgc gcccctgggc gttgcggccg
      961 cccgtccgct tcttggtcac caccagccgc ttctccggcg aggtcttggt gatctcgtcg
     1021 aacgtcagca cggtcatgaa ccggcgaccg gccgatgtgg gcttcagact cttgacaccc
     1081 atgaggttgc ctctatgact cgaacagctc gatcttggag cccggtccga gcgtcaccac
     1141 ggccttcttc cacgacggtc gccggcccag gtgccgcccc atccgcttct ctttgccgaa
     1201 gacgacctgg gttcgcaccc cggtgacctt gaccttgaaa atcgcctcga ccgcctgccg
     1261 gacctggacc ttgttggcgt ccatcgcgac ctggaagctc acctggttgt gcgcgtcctt
     1321 cagcgtggtc gccttctcgg tcaccagcgg gcggagcacg acctggcgcg gatctctcat
     1381 gaaagcaggc tctcctggag ccgcaccagc gccggccggt cgaagaccac ccgccggtgc
     1441 cgaagcaact cggccaccga tacctgcccc ggccgcacca cgctcagcca ccgcaggttc
     1501 cggcttccgc ggtcgagggc ctcggtgatg ttggcgacca ccagcagcgt gggctcctcg
     1561 gtcagcccca gcccgcccag tagcgcgagc atcgccttcg tcttgggctc ggccaaccgc
     1621 agctcctcga tcaccgtgac ctgaccggcg gccagcttgt cgctgaggct cgctcgcagt
     1681 gccgcccgcc gcgcctggcg cggcatgtcc tgggcatagc tgcgcggcgt ggggccgaag
     1741 ggcttgccgc cgcccttcca ttgggtggcg cggatcgagc cctggcgcgc gcgcccggtc
     1801 cctttctgcc gccacggctt cttgccaccc cccgagacct cgctccgccc cttggtgtca
     1861 tgcgtccccg cccggcggcc ggccagctcg cggaccacgg cctggtggac gagggggccg
     1921 ttcgcgggcg ccgcgaagac ggcgtcggcc aactccagcg tcccgctggg ttttccggtc
     1981 tggtcgagga cattgatggt cgccacggcg ctacttcttg gcggctttga ccgtccgctg
     2041 ctgcgccttc gagagcttca cgctcttccg caccacgatg agcgccccgg tggggccggg
     2101 gaccgcgccc ttgatcagga gcaggttctg ctcgggcatc acccggacca cctcgaggtg
     2161 cgggacggtc acccgatcgg cccccatccg gccgggcagg tggtgaccgg ggtaaacccg
     2221 cgacggatcc gaggaggcgc cgatcgatcc cggcgcccga tggaacatgg agccgtgggt
     2281 ggcgtcgcca ccgtaccagc cgtagcgctt cacgccgccc tggaagccct tgcccttggt
     2341 caccccggtc acgtccacca actcgccggg cttgaacagc tcgacggtca gggtctgacc
     2401 gacctggtag ccctcgacgc tcttgagccg gacctcgcgc aggacgcggg tggccgcgac
     2461 gctggccttc ttgaaatgcc cagccatcgg cttgccgacc ttctttcgct tgggctcgaa
     2521 cccgatctga agcgcctcgt agccgtcggt ggcctgggtc ttcacctgaa cgaccgagca
     2581 cggtcccgcc tcgaggacgg tgatggggac cgcgttgccg tcatcgccga agacctgagt
     2641 catgccgcgc ttgcgcgcga tcagcccgac cgtcagtgcc ttgcccatgc tctgctctcg
     2701 ctgcgccccc ggctcaggtc agcaccatct gggtctggat cgtctgggcc agcagccggc
     2761 cggcctcgtc ggtgatgcgg gtctgccaca ccatcgtccg cttcccccgg tggagcggca
     2821 cgctctcggc ccgcacggcg cccgaccgcc cggcggcgaa gaagttggtc ttcgactcca
     2881 gcgtcgtcgt cccggcgccc ggtggcaggt tgagcacggt ggcggtggcc cctaccgtgt
     2941 cggcgaaggc catgatggtc cctccgtgaa gggcgccgcc caccgtcttc agctcgtccc
     3001 gaatcgtcag ttcggcgacg accttgtctc gaccgacctc gagaaagcga atgccgagca
     3061 ggtcggccag cgtccccttc tgctgcgctt cgaggtcggc ggccgcttcg atggtcatgg
     3121 ccattcctag agctgttccg cgccgtggca cgagccgagc agacgaggac gcggagctgc
     3181 gacgggtatt ggcacggcgc tagagcttga tctcgacgtc caccccggaa ggcagatcga
     3241 gcttcatcag cgcgtccacc gtctgaggcg tcgggtccag gatgtcgagg agacgcttgt
     3301 gggtccggat ctcgaactgc tcgcgcgact tcgtgtccac gtgcggcgag cggagcacgg
     3361 tccagcggtt gatcgcggtc ggcaagagga cggggcccgc cactcgggcg ccggtccgcc
     3421 gcacggtctc cacgatctcc tttacggatc gatcgagcag gcgatgatca tacgcccgca
     3481 gccggatccg gatcttctgg tcggcgagga tggccatgct cgtggctccg gcccgctact
     3541 ccgagatctc ggtgaccacg cccgccccca ccgtccgccc cccctcccgg atcgcgaacc
     3601 gcagctcctt ctccagcgcg gtcggcgtga tcaacgcaac atccatcgcc acgttgtccc
     3661 ccggcatcac catctccacc cccgccggca acgtgcacac ccccgtcacg tccgtcgtcc
     3721 gaaagtaa
//
LOCUS       DASYRV010000180        19389 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_68249, whole genome shotgun sequence.
ACCESSION   DASYRV010000180 DASYRV010000000
VERSION     DASYRV010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 19389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19389
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68249"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2355)
                     /locus_tag="VGQ24_04475"
     CDS             complement(<1..2355)
                     /locus_tag="VGQ24_04475"
                     /inference="COORDINATES: protein motif:HMM:NF039196.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEV8454120.1"
                     /translation="MPTERSTSNGRKSKRRSGARMPIRPSDALDIDQLLAVLTAIRKG
                     DFSVKMPMSQVGVAGKISDTLNDIIDLNRETSREFERVSQAVGKEGKITQRAHLQGAA
                     GAWAASITSVNTLIGDLVQPTSEVARVIGAVAKGDLSQTMSLEIEGRPLMGEFLRIGK
                     TVNAMVDQLSSFASEVTRVAREVGTEGKLGGQARVKGVGGTWKDLTDNVNSMAGNLTA
                     QVRNIAQVTTAVANGDLSKKITVDVKGEILELKNTINTMVDQLNSFASEVTRVAREVG
                     TEGKLGGQAQVKGVGGTWKDLTDSVNSMAGNLTGQVRNIAEVTTAVANGDLSKKITVD
                     VKGEILELKNTINTMVDQLNSFASEVTRVAREVGTEGKLGGQAQVRGVGGTWKDLTDN
                     VNSMAGNLTAQVRNIAEVTTAVARGELNKKITVDVQGEILELKNTINTMVDQLSSFAS
                     EVTRVAREVGTEGKLGGQAQVKGVGGTWKDLTDNVNSMARNLTAQVRNIAEVTTAVAR
                     GELNKKITVDVKGEILELKNTINTMVDQLNSFASEVTRVAREVGTEGKLGGQAQVRGV
                     GGTWKDLTDNVNSMAGNLTAQVRNIAEVTTAVARGELNKKITVDVKGEILELKNTINT
                     MVDQLNSFASEVSRVAREVGTEGKLGGQARVKGVGGTWKDLTDNVNSMAGNLTAQVRN
                     IAQVTTAVANGDLSKKITVDVKGEILELKNTINTMVDQLSSFASEVTRVAREVGTEGK
                     LGGQADVQGVAGTWKDLTESVNFMAGNLTSQVRNIAEVTTAVAAG"
     gene            2584..4923
                     /locus_tag="VGQ24_04480"
     CDS             2584..4923
                     /locus_tag="VGQ24_04480"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEV8454121.1"
                     /translation="MPKNPLRILILEDVPMDAELVEYELERASIPFLSRRVDSRDAFL
                     HELDQFRPDLILSDYTLPRFDGMTALSLARERAPSIPFLIVTGSVNEETAVGCMKAGA
                     TDYLLKSNLARIGPAIEAALERERAHAEKTQAESALAASEQRFRSLVQNSSDLVTVLA
                     PDGTIIYASDSAERIVGYSPADLVGTSLLGYLDSSQVEQIQELLHTNGKSSVAGPIEF
                     SLRRPDGSAVWLEAVGSNLLADATIRGIVLNARDVSERKRADLALRESEERYRDLFDN
                     ASDLVCMSAPDGSLLYVNKAWQQGTGYGDDEIDRMQLLDIVHPDSRGYFTEVIDRVLQ
                     GERLDHVELMFMPKAGAPITVEGNLSCTFKDAVPSVVRGIYRDITERKRVEEQLRRAE
                     RMQAAGKLAGGVAHEVNNMMTGVIGFSEFVLRSLEPGDPRRADVEEVIRAGTRAADVT
                     RQLLAFTRQQVLRPQRVQINAVVSEMEKMLRRSLGEDKLLELRLSPDAGEIRADRGQL
                     EQVLINLVLNARDARTGHGRVSIETALSVWDEVYAQRHGGVDIPLGHYVMLAVSDDGC
                     GMDADVQERIFEPFFTTKPIGQGTGLGLSTVYGIVKQSGGYIWVYSEPGEGSVFKVYL
                     PQAGVALELNEPTAELVTAPTRGSETILVIEDENVVRHLACRGLRDHGYDVVEARNGT
                     QALRYIREHPQAVDLVISDVVMPEMGGRELGRRLATLDPDLPILYMSGYTGDDVVQRG
                     LLDPGAPFQQKPFTPAGLAQKVRAMLDQDPRRKAAASSA"
     gene            complement(4936..5172)
                     /locus_tag="VGQ24_04485"
     CDS             complement(4936..5172)
                     /locus_tag="VGQ24_04485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454122.1"
                     /translation="MPGVEARLREEYKRIYHDLNPAAWYQVVPIFPGVTQRMVNMAGE
                     RLARLATPRGFVTMRADHLEFRSATVGSKTHASS"
     gene            complement(5334..8249)
                     /gene="acnA"
                     /locus_tag="VGQ24_04490"
     CDS             complement(5334..8249)
                     /gene="acnA"
                     /locus_tag="VGQ24_04490"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HEV8454123.1"
                     /translation="MTNTFGARSTLKVGSRGFEIFRLDSMAAAGSDIQRLPYSLRILL
                     EDLLRTEDGVSVTRDDIEALARWSPATPSTREIAFTPARVLLQDFTGVPAVVDLAAMR
                     DAMAELGGDPSRINPLQPVELVVDHSVQVDAFGTAQSFSTNVDLDYQRNRERYQFLRW
                     GQRAFENFRVVPPNTGIVHQVNLEYLARVVFTSDENPQARPGELPQAYPDTLVGTDSH
                     TPMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFRLEGRLPEGATATDLVLTVT
                     ELLRRKGVVGKFVEFYGPGLGSLALADRATIGNMSPEYGATCAIFPVDDVTLQYLRFT
                     GRSEERVRLVEAYMKEQGLFHTAASPEPVFTDTLSLDLSSVEPSIAGPRRPQDRIKLS
                     DAKRSFRDALPSLLPAGTQAPGKDGSKGSAQGSTAAGVWGEGSPASPAAHAVMLEDAS
                     EVLDHGSVVIAAITSCTNTSNPSVMLAAGLLAKKAVEHGLERKPWVKTSLAPGSKVVT
                     DYYDRAGLTPYLDRLGFNLVGYGCTTCIGNSGPLPMEISDAIQRRRLVACAVLSGNRN
                     FEGRINSDVRANYLMSPPLVVAFALAGRIDIDLFHEPLGHTPQGVPVYLRDIWPTTAE
                     VEQTLASAIKSDMYRRSYGAVYAGDERWNALEVPGGDRFAWSPHSTYVRRPPYFEGMS
                     KNTPDKVEEIRGARVIAVLGDSVTTDHISPAGSIKKDSPAGRYLTDQGVSPADFNSYG
                     SRRGNHEVLVRGTFANTRIRNRLAPNTEGGVTTYLPTGEVLPIYDAAMRYQADGTPLL
                     VLAGKEYGSGSSRDWAAKGPALQGIRAVIAESYERIHRSNLVGMGILPLQFALGESAD
                     RLGLTGREVFDLEGLSAAIASRFAAGRTLAVQARREDGSKIRFSVTIRIDTPQEVLYY
                     QHGGILQYVLRQLLTGRQKPQAISGGTAGGLQPKPSNAGKVEEGSLESFPASDPPAY"
     gene            8412..9470
                     /locus_tag="VGQ24_04495"
     CDS             8412..9470
                     /locus_tag="VGQ24_04495"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEV8454124.1"
                     /translation="MPLAQDARPVVAGSANCLIVDDEPSVRRSLARMLAAQGFTCLEA
                     GTGKEGLEVLDQTGEIPLIISDMRMPELDGMGFLEAVRQRFPDSSVIMLSGMSETSTA
                     VDCLHLGAADFLLKPISLGELQARVTRALEKRALVLQNRFYQEHLERQVQEQAQRIQD
                     LFLQGVQMLARALEAKDAYTRGHSIRVSQCAVATAARLGFGGPGLDGIRLGGELHDIG
                     KIGTREAVLHKPGSLTADEFRHITEHPALGERMLFPLAHESPDVLRIVRSHHERLDGA
                     GFPDGLRGEKIPIEARIVAVADAFDAMTTRRPYRESRPPQEAMCELRRVAGTQLDPEA
                     VEAFVAAFPDPRELPVSA"
     gene            complement(9395..9874)
                     /locus_tag="VGQ24_04500"
     CDS             complement(9395..9874)
                     /locus_tag="VGQ24_04500"
                     /inference="COORDINATES: protein motif:HMM:NF016045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity iron permease family protein"
                     /protein_id="HEV8454125.1"
                     /translation="MSIANSFNRFAKWTSRAAGHPSIFAIAVAVILIWAVTGPIFHFS
                     DTWQLFINTGTTVITFLMVFLIQNTQNRDSAATQIKLDELIRALKGAHNELADLEDMS
                     DEELERMKHHYTRLAEKARARLQNRPRERDDDDQAETGSSRGSGKAATKASTASGSS"
     gene            complement(9983..10165)
                     /locus_tag="VGQ24_04505"
     CDS             complement(9983..10165)
                     /locus_tag="VGQ24_04505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454126.1"
                     /translation="MSESERLNTLRHDLSNPLSALLAETQLLLLNESHIDAETLQGLR
                     EIEALAIRMRTMLREI"
     gene            10509..11756
                     /gene="rho"
                     /locus_tag="VGQ24_04510"
     CDS             10509..11756
                     /gene="rho"
                     /locus_tag="VGQ24_04510"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEV8454127.1"
                     /translation="MDIAELKQKSVAELHTLAEQLNITNYSGLRKQDLIFRIEQSLLD
                     SDTVIRGEGVLEILPEGYGFLRSQDWNYLYGPDDIYVSPSQIKRFDLRTGDTVMGQVR
                     PPKEGERYLALLKVEQVNFEEPEKTKHRIAFDNLRPRYPDARIRLERKNGDLSMRVVD
                     LLSPIGKGQRALIVAPPKAGKTILMQKLANAISENHPEIVLIVLLIDERPEEVTDMEE
                     NVKAEVISSTFDEPADRHVQVADMVIEKSKRLVEHGRDVVILLDSITRLARAHNVVVP
                     HSGKILSGGVDANALQKPKRFFGAARNIDKGGSLSIIATALIDTGSRMDEVIFEEFKG
                     TGNSELVLDRRLADRRIYPAIDIQRTSTRKEELLMDKDELNRVYLLRNFLADMPPVES
                     IEFLLERMKRTKNNKEFFATMAQ"
     gene            11853..12332
                     /gene="ruvX"
                     /locus_tag="VGQ24_04515"
     CDS             11853..12332
                     /gene="ruvX"
                     /locus_tag="VGQ24_04515"
                     /inference="COORDINATES: protein motif:HMM:NF015607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEV8454128.1"
                     /translation="MTDTIPAIGRILGVDWGEIRIGLALSDETQTLASPLETLVRRAG
                     KRLPMPRLLELTSLHQPIGIVVGLPLSPEGTEEESASAAREMAATIARRTGLPLELWD
                     ERMSTARALAAIWEQGGSTRGRKREVDALAASVLLQHFLDARRNRTERTEKTERTER"
     gene            12329..13318
                     /gene="mltG"
                     /locus_tag="VGQ24_04520"
     CDS             12329..13318
                     /gene="mltG"
                     /locus_tag="VGQ24_04520"
                     /inference="COORDINATES: protein motif:HMM:TIGR00247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEV8454129.1"
                     /translation="MKARVPVVFALFVLSVLACSGSAQSARVILPPGATFAAVTDSLA
                     AHRVVSHPRWFKLLARMRGVDRSVHAGVYEFPAGTPPWTVLSMLAHGKKAALRFTVPE
                     GLTILDVAELAAARLGIPADSFVTAAQDGKAAAALLGIRVTSFEGFLRPETYILPADI
                     NAPELIRLMAEGFKSEWKPEWDARLDSLKMSRLALVTLASIVEGEAKADEEREIIAGV
                     YRNRLRIGMALQADPTVQYAISLKRGRRKPRLFQKDYQIKSPYNTYLYPGLPPGPVNS
                     PGRRSLEAALYPADVRYLYFVAGPDGRHVFSRTYGEHLRAIRKLRRTGKGLSP"
     gene            complement(13310..13948)
                     /gene="thiE"
                     /locus_tag="VGQ24_04525"
     CDS             complement(13310..13948)
                     /gene="thiE"
                     /locus_tag="VGQ24_04525"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEV8454130.1"
                     /translation="MADNVAALLRLMLVTDDRLVQRRDLVALALAAERGGVSSVQLRL
                     KQAEGRELVQMVRGLMQALTVPVLVNDRPDVAIATGAAGIHLGPDDMPVELVRRIAPR
                     GFIIGASVGSEAEARKAGAADYWGIGPWRDTATKEDAGSGLGPEGFQRLVALANGKPC
                     IAVGGVRPEDVPQVLAAGGTGVAVVSGILGAADVEAATRRYSVMLQGGMSSG"
     gene            13947..14318
                     /gene="aroH"
                     /locus_tag="VGQ24_04530"
     CDS             13947..14318
                     /gene="aroH"
                     /locus_tag="VGQ24_04530"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR01796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004106 - chorismate mutase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HEV8454131.1"
                     /translation="MTPPVRLHGIRGATTVARNDPDEILAATDELLHTLIEANELQPD
                     DIVSALFTVTRDLDAAFPARAAEEFGWNIVALLHATEIPVPGSLPKCIRLLVHAYTGR
                     SRAEIKHCYLRGATVLRPDRA"
     gene            14315..15469
                     /locus_tag="VGQ24_04535"
     CDS             14315..15469
                     /locus_tag="VGQ24_04535"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF022137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HEV8454132.1"
                     /translation="MTAVRVTARGAERWTRGHPWIYRSEVLDGPDGPGLVEVKDQRGR
                     FIGQGLYSPRSEIRLRLLERTDRPVDASWWRERLAASAAQRSHIDATAYRVVHGEGDA
                     IPSLVVDRYDRWLVVQILSAGLETMRDTIIAALVESLDPQGILLRNDAPVRSREGLSL
                     EPVLGYGSVPSEIEVREGPVRYLAAPWEGQKTGAFLDQRPNRLLAGKLVAPGGRALDC
                     FAYHGSFALHLARRAASVLALDASAEALERGAANASLNGLGNIEWRVADVFESLRELE
                     RSRERFNAIVLDPPAFAKSKASVPAALRGYREINLRAMRILTPGGILLTASCSFHVRL
                     PQFLGMLAEAAGDSGRRIVMDRILGPGDDHPEVLTIPETGYLKGAVVRAV"
     gene            15576..16451
                     /locus_tag="VGQ24_04540"
     CDS             15576..16451
                     /locus_tag="VGQ24_04540"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HEV8454133.1"
                     /translation="MPSVADSREKSSGVRRVLGGILVANIVVVVIKFTVGLDTNSLAV
                     FGDALQSSVDAANNVIGIFVVRLASKAPDEDHPYGHAKFETLGALLIALLLALSIFEL
                     VRGALARLMSGAPPLNVSSTALGLLVFTLAVNIGVVWLEIRAGRRLRSDLLLADALHT
                     RTDVFITLGVLGGLALARAGLAWADPALALIVAVLVGRAGYQILHRAIPSLVDERAFD
                     QTTIQREAEGVAGVVSAYAIRSRRAGDRRFAELTIAVDGGADVASAHRIADQVEARLR
                     DSLQLDEVTVHVEPC"
     gene            16445..17299
                     /locus_tag="VGQ24_04545"
     CDS             16445..17299
                     /locus_tag="VGQ24_04545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454134.1"
                     /translation="MLTAAEVRQAHRRRRSPYSDKQHYQEYILQRIEGYKNSIGRDEL
                     LRLGDEAASELQATSEGQFVLTEVLMLESVDRLIMKRLSLRPYRRWRQQFLRLRAAQR
                     TPTHWGVEPNCPLTPLLPRIEPEDTALVIGTRAAPMTFLLAAHDAAVTFLADDLGCVE
                     RVESKMAEEALSSVFESFVTQLDQPLPEFMSFLAGFDIVVLDPEVLVDLSAPGRTELV
                     HDLQQRSRPQGIHVILPSCPALAPDALRGMYDGWTQEEELKRRRRADSKGAPGLILCK
                     PVCPPDTA"
     gene            17451..17621
                     /locus_tag="VGQ24_04550"
     CDS             17451..17621
                     /locus_tag="VGQ24_04550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454135.1"
                     /translation="MTSLPLVAQSEPLGIVIRSGAPKPQTVRFWAYLWATDDDDTREL
                     HWHQRVPAEHAA"
     gene            17759..>19389
                     /locus_tag="VGQ24_04555"
     CDS             17759..>19389
                     /locus_tag="VGQ24_04555"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEV8454136.1"
                     /translation="MPTLTLNGKSVSFQPGETILEAARGAGVDIPTLCWYPKLPIVGN
                     CRICLVSVQGQNKLIPACAAPAADGMVVETESSAAVDNRRGVLDFLLERYPGEHLANG
                     GRTDPRNEFERYVVQYDVPVRTHHELPLRTGDERPGDVMIQHDMSTCILCTRCVRACE
                     DIQEVGVLDVGMRGEHAQIIVGGDGDPDHAGCTWCGECVRVCPTGAIFEFIPRQLFGS
                     EALRAPDKIARSVCPYCAVGCQLDLHVKNDTLMRVTSPWIEEATPNQGSTCVKGRFGY
                     DFALHRDRLTAPLIRKGWMCQDGQWTWTGEWPRRREGPWLTIEEKGNRKKPRPPLRQV
                     GKPPLTGVPQLEEDDVRDRVATPAGWYSAFREATWEEALSLTTQQILRIRDEHGPDAL
                     GALSSAKCTNEDNYAFMRMVRGAFRTNNVDHCTRLCHSTSVAAMNRALNTAAASGSMR
                     EIEEATDVIFIAGANTTESHPVFGALIKRAVARGAKLIVADVRKVELAGLADIHLQMY
                     PGSDVALFNTMLHHIIDAGLTDPEFIRDRTREFAKV"
BASE COUNT         3283 a         6407 c         6173 g         3526 t
ORIGIN      
        1 gcccgccgct acagccgtcg tcacctccgc gatgttccgc acctgggagg tcaggttgcc
       61 ggccatgaag ttcaccgact cggtcaggtc cttccacgtg cccgccacgc cctgcacgtc
      121 cgcctggccg ccgagcttcc cttccgtacc gacttctctc gcgacccgcg ttacttccga
      181 ggcgaacgac gagagctggt ccaccatcgt gttgatggtg ttcttcagct cgaggatctc
      241 gcccttcacg tccaccgtga tcttcttcga caggtcgccg ttcgccaccg cggtggtcac
      301 ctgagcgatg ttacgcacct gcgccgtgag attcccggcc atcgagttca cattgtcggt
      361 caggtccttc caggtgccgc cgacgccctt cacccgggct tgcccgccca gcttcccttc
      421 ggtaccgacc tcacgggcca cgcggctgac ctcggaggcg aaggagttga gttggtccac
      481 catcgtattg atggtgttct tgagctccag gatctcgccc ttcacgtcca ccgtgatctt
      541 cttattcagc tcgccgcggg ccaccgccgt cgtcacctcg gcaatattgc ggacctgggc
      601 ggtgaggttg cccgccatcg agttcacgtt atcggtcagg tccttccagg taccgcccac
      661 cccgcggacc tgcgcctggc cacccagctt gccttcggta ccgacttcgc gcgccacgcg
      721 ggtcacttcc gacgcgaagg agttcagctg gtccaccatc gtgttgatgg tgttcttgag
      781 ctcgagaatt tcgcctttca cgtcgaccgt gatcttcttg ttcagctcgc cgcgagccac
      841 cgcggtggtg acctcggcga tgttacgcac ctgggccgtc aggttgcggg ccatcgaatt
      901 cacgttgtcg gtgagatcct tccaggtgcc gccgacgccc ttcacctgcg cctgaccgcc
      961 gagcttgcct tcggtcccga cctcgcgagc gacgcgggtg acttcggagg cgaacgagct
     1021 cagctggtcc accatggtgt tgatggtgtt cttgagctcc aggatttcgc cctgcacgtc
     1081 gaccgtgatc ttcttgttca gctccccgcg cgcgacggcg gtggtgacct cggcgatgtt
     1141 gcgcacctgg gccgtcaggt tgccggccat cgagttgacg ttgtcggtca aatccttcca
     1201 ggtaccaccg acgccgcgga cctgcgcctg gccgccgagc ttgccctcgg tgcccacctc
     1261 gcgagccacg cgggtcacct cggacgcgaa ggagttgagc tggtccacca tggtgttgat
     1321 ggtgttcttg agctcgagaa tttcgccttt gacgtcgacg gtgatcttct tggagaggtc
     1381 gccgttggcg acggcggtgg tgacctccgc gatattgcgc acctgccccg tcaggttgcc
     1441 ggccatcgag ttgacgctat cggtgaggtc tttccaggtc ccacccacgc ccttcacctg
     1501 cgcctggccg cccagcttgc cttcggtacc cacctcgcga gcgacgcggg tgacttccga
     1561 cgcgaaggag ttgagctggt ccaccatggt gttgatggtg ttcttgagct ccaggatctc
     1621 gcccttcacg tccacggtga tcttcttgga gaggtcgccg ttcgcgaccg cggtggtcac
     1681 ctgggcgatg ttacggacct gtgccgtcag gttcccggcc attgaattca cgttgtcggt
     1741 gaggtccttc caggtgccgc ccacgccttt gacgcgcgcc tgaccgccca gcttgccttc
     1801 ggtgccgact tcacgggcca cacgggtcac ctccgaggca aatgagctga gctggtccac
     1861 catggcgttc accgtcttgc cgatccggag gaactcgccc atcagcggcc ggccttcgat
     1921 ctccagcgac attgtctggg agaggtcgcc cttcgccacc gccccgatca cccgggctac
     1981 ctcgctggtc ggctggacca ggtcgccgat caaggtgttg accgaggtga tcgatgccgc
     2041 ccaggccccc gcggcgccct gaaggtgggc ccgctgggtg atcttgccct ctttgccgac
     2101 ggcctggctt acccgctcga actcccggga ggtctcccga ttcaggtcga tgatgtcgtt
     2161 gagggtgtcg gagatctttc cagcaacccc gacttgcgac atgggcattt tgacggagaa
     2221 gtcgcccttg cggatggccg tgaggactgc cagcagttga tcgatatcga gtgcgtcgga
     2281 cggcctgatt ggcatacgag cgcccgaccg ccgcttcgac ttgcgaccat tgctggtcga
     2341 ccgttcagtc ggcatgaaaa ctcctgagcg tgctagtggt atggacggag accgctcaac
     2401 atggatctgt gcagagacaa tcggctgtga gacagatcac aggctggtag aaaccgcgta
     2461 ttggtggcat gcggcttgac ttacccgtca cttcggcgac acttcagcat caccgaatcg
     2521 acttaataat agggccgtgc gcggtcaccc ggcaggccgc cgcccctacc tgaatgggtc
     2581 tgcatgccca aaaacccgct ccgaatcttg atcctcgagg atgtgccgat ggatgccgag
     2641 ctcgtggagt acgagctcga gcgggccagt attccgttcc tctctcgccg ggtcgacagc
     2701 cgggacgcat ttctccacga gctcgaccaa ttccgccccg acctgattct ctccgactat
     2761 accctgcccc gcttcgacgg catgaccgcg ctctccctgg ctcgggagcg ggcgccgagc
     2821 atccccttcc tcatcgtcac cggctcggtg aacgaggaga cggccgtcgg ctgcatgaag
     2881 gccggggcaa ccgactacct gctcaagagc aatctggccc ggatcggccc ggccatcgag
     2941 gccgcgctgg agcgggagcg ggcccacgcc gaaaagaccc aggccgaatc agccctggcc
     3001 gcgagcgagc agcggttccg ctcgctggtt cagaactcgt ccgatctggt cacggttctc
     3061 gctcccgatg gcacgatcat ctacgccagc gactcggcgg agcgcatcgt cgggtattct
     3121 cctgccgacc tcgtgggcac cagcctgctg ggatacctcg acagcagcca ggtggagcag
     3181 atccaggaac tactccacac caacggcaag tccagcgtgg cgggcccaat cgagttcagc
     3241 ctgcggcgcc ctgacggttc ggcggtctgg ctcgaggcgg taggcagcaa tctcctcgct
     3301 gacgccacca tccggggcat cgtgctcaac gcccgggatg taagcgagcg caagcgggcc
     3361 gacctggcgc ttcgagagag tgaagaacgc tatcgcgacc tgttcgacaa cgcgagcgat
     3421 ctggtatgca tgtcggcgcc ggacgggtcg ctcctgtacg tgaacaaggc gtggcaacag
     3481 ggcaccggtt acggcgacga cgagatcgac cggatgcagc tcctcgacat cgtgcatccc
     3541 gacagccgcg ggtacttcac cgaggtcatc gatcgcgtgc tccagggcga acgcctcgat
     3601 cacgtggagc tgatgttcat gcccaaggca ggcgctccga tcacggtcga gggaaacctg
     3661 agctgcacct tcaaggacgc tgtcccctcc gtggtacgcg gcatttatcg cgacatcacc
     3721 gagcggaagc gggtggagga gcagctccgg cgggcggagc gcatgcaggc tgccggcaag
     3781 ctggcaggcg gggtagccca cgaggtcaac aatatgatga ccggcgttat cgggttcagc
     3841 gagttcgtgc tccggagcct ggaaccgggc gaccctcgca gggccgacgt cgaggaagtc
     3901 atcagggccg gcacccgggc ggcggacgtc acccgccagc tgctggcatt cacccggcaa
     3961 caggtcctgc gaccgcagag ggtccagatc aatgcggtcg tgtcggagat ggaaaagatg
     4021 ctgcgccgct cgctcggcga ggacaagctt ctggagctgc ggctctcgcc tgacgcagga
     4081 gagattcgcg ccgatcgcgg ccagctggag caggttctca tcaatctggt tctcaatgct
     4141 cgcgatgcga ggaccgggca tgggagggtc tcgatcgaaa cggccctgtc cgtctgggac
     4201 gaggtctacg cccagcgtca cgggggcgta gacatcccgc tggggcatta tgtgatgctc
     4261 gccgtgagcg acgacggctg cggtatggat gcggacgtgc aggagcggat cttcgagccg
     4321 ttcttcacca ccaaaccgat cggccagggt accggcctgg gcctctccac ggtgtatggg
     4381 atcgtgaaac agagcggtgg gtacatctgg gtctacagcg agccgggcga gggaagcgtc
     4441 ttcaaagtct acctgcccca ggccggagtg gcccttgagc ttaacgaacc gaccgccgag
     4501 cttgtcacgg ctcccacgcg cggatccgaa accatcctcg tcatcgagga cgaaaacgtc
     4561 gtgcgacatc tggcttgccg gggtctccgg gatcacggct acgacgtggt cgaagcccga
     4621 aacgggaccc aggcgctacg ctacatccga gagcaccctc aggcggttga tctggtgatc
     4681 tcggacgttg tgatgcccga gatgggcgga cgtgagctgg ggcggcgtct agcgacactg
     4741 gatcccgatc taccgatcct gtacatgtcg ggctacacgg gggacgatgt ggtccagcgc
     4801 ggtctgctcg atcccggcgc accgtttcag cagaagccgt tcactcccgc cgggctggcc
     4861 cagaaggtac gggcgatgct cgaccaggat ccccggcgga aggccgccgc ctcctcagcg
     4921 tagccaaacc ccggctcagg aactggcgtg ggttttcgac cccacagtgg cggatcggaa
     4981 ctccagatgg tccgcgcgca tggtgacgaa gccgcgcggg gtagccaacc gcgctagtcg
     5041 ctcgcccgcc atgttgacca tccgctgggt gaccccggga aagatgggca ccacttgata
     5101 ccacgccgcc ggattgaggt cgtgatagat ccgcttgtat tcctctctga gacgcgcttc
     5161 aacgcctggc attcccgctc ctcgccgatg cggtcggctt tcgggtaagc ggcatactct
     5221 cagggcggta ttggagtgga ggtgaaggtc aagataagga cgtcggtcat ggcgggaaag
     5281 acgggaatca tccattgcct tccttcccgt ctttcccgcc cttcccgccc ttcctaatac
     5341 gccggaggat cactcgccgg gaacgactcc agcgagccct cctccacctt gcccgcgttg
     5401 gaaggcttgg gctgtaggcc cccggcggtg cctccgctga tggcctgtgg cttctgccgg
     5461 ccggtaagca actgacggag gacgtactgg aggattccgc cgtgctggta gtagaggact
     5521 tcctgcggcg tgtcgatccg gatggtcacg ctgaaccgaa tcttcgatcc atcctcccgc
     5581 cgggcctgga ccgcgagggt gcgacccgcg gcaaacctcg atgcgatggc ggccgagagc
     5641 ccctccagat cgaagacctc acggccggtg agccctaacc tgtcggccga ctctcccagg
     5701 gcgaattgca gcggaagaat tcccatcccc accaggttgg agcggtggat gcgctcgtag
     5761 ctctccgcga tcaccgcgcg gatcccctgg agtgccgggc ccttggcggc ccaatcccgg
     5821 ctcgatcccg agccatactc tttcccggcg agcaccagga ggggggtccc gtccgcctgg
     5881 tagcgcatgg ccgcatcata gatgggcagc acttcaccgg tcgggaggta cgtggtcaca
     5941 cctccctcgg tgtttggcgc cagccggttc cggatccggg tattcgcaaa ggtgccgcgc
     6001 accagcacct cgtggttgcc gcggcgcgag ccgtatgagt tgaagtcggc gggagacacc
     6061 ccttgatccg tcaggtagcg cccggcgggc gagtctttct tgatactgcc tgccggtgag
     6121 atgtggtcgg tcgtgacgct gtcgcccagc accgcgatga cccgggcccc ccggatctcc
     6181 tctaccttgt cgggggtgtt cttcgacatt ccctcgaagt atggcggccg cctgacatag
     6241 gtggagtggg gcgaccaggc aaagcggtcg ccgcccggca cctctagcgc gttccagcgc
     6301 tcgtctccgg cgtataccgc accgtagctc cgccggtaca tgtccgattt gatggcggag
     6361 gcgagcgtct gttcgacctc cgccgtggtc ggccagatat cgcggagata gaccggtacc
     6421 ccttgaggag tgtgccccag cggttcatgg aacaggtcga tatcgatccg gccggccagc
     6481 gcgaacgcca cgaccagcgg cggtgacatc agataattcg cccgcacatc cgagttgatc
     6541 cgaccctcga agttccggtt gccggatagc accgcgcacg ccaccaatcg gcggcgctga
     6601 atggcgtcgg agatctccat tggcaatggg ccggaattcc cgatgcaggt ggtgcagccg
     6661 tagcccacga ggttgaagcc cagccgatcc agatagggcg tgagaccggc tcggtcgtag
     6721 tagtccgtga ccaccttgga gcccggggcg agggatgtct tgacccaggg cttccgctcc
     6781 aggccgtgct cgaccgcctt cttggccaga aggccggcag ccagcatgac cgaggggttc
     6841 gaggtgttgg tgcagctggt gatggcggcg atcacgacgg agccgtggtc gaggacctcc
     6901 gaggcgtcct ccagcatgac ggcgtgtgcc gcgggcgatg ccggtgatcc ctcgccccag
     6961 acgccggctg cggtggatcc ttgagccgac cccttggatc cgtccttccc aggagcctgg
     7021 gtgcctgccg gtagcaggct gggcaaggcg tcccgaaacg atcgcttcgc gtccgacagc
     7081 ttgatccggt cctgcggccg ccgcggtccc gcgatgctgg gctcgacact cgagagatcc
     7141 agcgagagcg tgtcggtgaa caccggctcg ggtgacgccg cggtatgaaa gagtccctgc
     7201 tccttcatgt aggcttcgac cagccggaca cgctcctccg accggccggt gaaccggaga
     7261 tactggaggg tcacgtcgtc caccgggaag atggcgcatg tggctccgta ctcgggcgac
     7321 atgttcccga tggtggcccg atcggccagt gccaggctgc cgagtccggg accgtagaac
     7381 tccacgaact tgccgaccac gcccttgcgc cggagtagct cggtgacagt gaggacaagg
     7441 tcggtggcgg tggcgccctc gggcagccgg ccttccagcc gaaatccgat gacctccggg
     7501 atgagcatgg agaccggctg gcccagcatc gcagcctccg cctcgatgcc tcccacgccc
     7561 cagcccagga cgccgagccc attgatcatt ggggtatgcg agtcggtacc gaccagcgtg
     7621 tcgggatagg cctggggcag ctcgccgggt cgggcctgag ggttctcgtc cgaggtaaat
     7681 accactcggg cgaggtactc caggttcacc tggtgcacga tgccggtatt cggcggcacc
     7741 acccggaagt tctcgaaggc acgctgcccc cagcgcagga actgatatcg ctcccggttc
     7801 cgctggtagt cgagatcgac gtttgtgctg aacgattgcg cagtgccgaa ggcgtctact
     7861 tgcaccgagt ggtcgaccac gagctcaacc ggctgcagcg ggttgatccg gctcgggtcg
     7921 ccgccgagct cggccatcgc gtcgcgcatg gccgcgagat ccacgaccgc gggcacgccg
     7981 gtaaagtcct gcaacagcac tcgagcgggt gtaaaggcga tttcccgggt ggacggcgtc
     8041 gctggcgacc agcgcgcgag cgcctcgata tcgtcccggg tgacgctgac gccgtcctcg
     8101 gttcgcagca gatcttcgag cagaatccgg agagagtatg gcagccgctg gatgtcgctt
     8161 cccgctgccg ccatggagtc gagccggaag atctcgaacc ctcgactgcc gaccttgagg
     8221 gtggaccgcg cgccgaaggt gttggtcatt ggtgtaaagt aagctctttg gcctgtagcg
     8281 gcatcgcggg agaccggtgc cacaatactg ccaacaggac cgacagtgga ctttccggcc
     8341 cgatgctttt acagtgttgg tccgttggat gttcgtggca tccatcatcc ctcctgattg
     8401 gttaccgccg catgccactc gctcaggatg cgaggccggt cgtggccggc tccgcgaact
     8461 gtctcattgt cgatgacgaa cccagcgtcc gtcgctcgct ggcccgcatg ctggcggctc
     8521 agggcttcac ctgcctcgaa gccggcaccg gcaaggaggg actcgaggtt ctcgaccaga
     8581 ccggcgagat ccccctcatc atctccgata tgcgaatgcc cgagctcgac gggatgggct
     8641 tcctcgaagc ggtgcgtcaa cgctttcccg acagctcggt catcatgctg agcgggatga
     8701 gcgagaccag caccgcggtg gactgccttc acctcggcgc tgctgatttc ctgttgaagc
     8761 ccatctcgct cggtgagctc caggcccggg tgacccgggc gctggagaag cgggcgctgg
     8821 tgctccagaa ccgcttctat caggagcacc tcgagcgcca ggtgcaggaa caggcgcagc
     8881 ggatccagga cctgttcctt cagggcgtcc agatgctggc ccgggccctc gaggccaaag
     8941 acgcctatac ccgggggcac tccattcggg tcagccaatg cgcggtggcc acggcggccc
     9001 ggctgggctt cggcgggccc ggcctcgatg gcatccggtt gggcggcgag ctgcacgaca
     9061 tcgggaagat cggcacccgg gaggcggtgc tgcacaagcc cggctcgctc acggccgacg
     9121 agttcaggca cattaccgag catcccgccc tgggagaacg gatgctcttt cccctggccc
     9181 acgaatcgcc cgatgtcctg cggatcgtgc gctcgcacca cgagcgactg gatggcgcgg
     9241 gatttcccga cggcttgcgg ggagagaaga tcccgatcga ggctcggatc gttgcggtgg
     9301 ccgacgcgtt cgacgccatg accacccgac ggccctatcg cgagtcgaga cctccccaag
     9361 aggccatgtg cgagctgcgc cgcgtggccg gtactcagct ggatcccgag gcggtcgagg
     9421 ccttcgtcgc cgcctttcct gatccgcggg agctgcccgt ctcggcctga tcgtcatcgt
     9481 cccgctccct aggacggttc tgcagcctgg cgcgcgcctt ctccgccagc cgggtatagt
     9541 ggtgcttcat cctctccagc tcctcgtcgc tcatgtcctc gaggtccgcc agctcgttgt
     9601 gggcaccctt gagcgcacgg atcagctcgt cgagcttgat ctgcgtcgcg gcgctatcgc
     9661 ggttctgggt attctggatc aggaaaacca tcaggaaggt gatgacggtc gtcccggtgt
     9721 tgatgaacag ctgccaggta tcgctgaaat ggaagattgg gccggtcaca gcccagatca
     9781 gaatgaccgc gaccgctatc gcgaagatgc tcggatgacc cgcggctcgg gaggtccatt
     9841 tggcaaaacg attgaaggag ttcgcgatgc tcatcgttga ccctcgctga agccatggtg
     9901 cgtggaccgg aacaccgtca accataacgt cctggcggag ttagcgttgt gttgtacctc
     9961 actgggaggt gccagcggca ggctagatct cccgcaacat ggtccgcatc cgaatcgcga
    10021 gggcttcgat ctcgcgcagg ccctggagcg tttcggcatc gatgtgggac tcattcagga
    10081 ggaggagctg ggtctcggcg aggagcgccg acagcggatt ggacaggtcg tgccgcagcg
    10141 tgttcagccg ctcggattcg ctcatagggc cctgggacag aaggtcacga acccaatggt
    10201 gaagaggaca acctccgcag tgatacggag ttgatggaac attgtacctg cccggggggt
    10261 tatgcaatag agcgggcccg gccccggtag gtgaagaacg cacaacctct tgactgggct
    10321 tgcggcggcg tctagtttag ggtgcttctt gttggccgga aactccccgt atcacaccgt
    10381 cttggtcttg tacttttcgg cgccctcggg cccaccacat agacagtcca cctcactcgg
    10441 tcttgcactc tcacaatccc tcaccccagc cagctctctg actggtctat ccgtcttgga
    10501 gtccctccgt ggatatcgct gagctaaagc agaagtcggt tgccgagctg cacacgctcg
    10561 cagagcaatt gaacatcacc aactattcgg gcctccgaaa acaggatctg attttccgga
    10621 tcgagcagtc attgctcgat tcggacacgg tcattcgggg tgagggagtg ctggagattc
    10681 tcccggaggg atacggcttt ctccgcagcc aggactggaa ctacctctac ggtccggacg
    10741 atatctacgt ctcgcccagc cagatcaagc ggttcgacct ccgcaccggt gacacggtca
    10801 tgggccaggt tcgcccaccc aaggagggtg agcgctacct ggcgctgctg aaggtcgagc
    10861 aggtcaactt cgaggagccg gaaaagacca agcaccggat cgccttcgac aacctgcggc
    10921 cccgctatcc cgacgcgcgc atccgattgg agcgaaagaa cggcgacctg tcgatgcggg
    10981 tggtggacct cctctcgccc atcggcaagg gccaacgggc ccttatcgtg gctccgccca
    11041 aggccggcaa gacgatcctg atgcagaagc tggccaacgc catcagcgag aatcatccag
    11101 agatcgtcct catcgtgctg ctgatcgacg agcggcccga ggaagtgacg gacatggagg
    11161 aaaacgtcaa ggcggaagtc atctcgtcca ccttcgacga gcccgccgat cgccacgtgc
    11221 aggtggccga catggtcatc gaaaagtcga agcggctggt ggagcacggc cgggacgttg
    11281 tcatcctgct cgattcgatc acccgcctgg cccgggccca taacgtcgtg gtgcctcact
    11341 cgggcaagat tctctccggc ggcgtggatg ccaacgcctt gcagaagccg aagcggttct
    11401 tcggtgccgc gcgtaacatc gacaagggcg gcagtctcag catcatcgcc accgccctga
    11461 tcgataccgg cagcaggatg gacgaggtca tcttcgagga attcaagggt accggcaact
    11521 cggagctggt gctcgaccgc cggttggccg accggcggat ctatcctgcc atcgacatcc
    11581 agcggacgtc cacccgcaag gaagagctct tgatggacaa ggacgagctc aaccgggtgt
    11641 atctgctgcg taacttcctg gcggacatgc ccccggtcga gtcgatcgaa ttcctgctcg
    11701 agcgaatgaa gcgcacgaag aacaacaagg aattcttcgc aacgatggcg caatgaagcc
    11761 gtgaacagtc aacggtgaac ggtgaacggg gggttccgat ggcgagtgga gcccctgttt
    11821 accgttcacc attgactgtt tacgcttttt cgatgactga caccatcccg gccattggac
    11881 gcatcctcgg agtcgactgg ggcgagatcc gaatcggcct ggccctcagt gatgagaccc
    11941 agacactcgc gtccccgctc gagaccctgg tgcgccgagc cgggaagcgg ctgccgatgc
    12001 cgcgcctgct cgagctcacc tcgctgcacc agccgatcgg gatcgtcgtg ggcctgccgc
    12061 tgtcccctga gggcaccgag gaggagagtg cctcggccgc ccgggagatg gccgcgacga
    12121 tcgccaggcg gaccggtttg ccgctcgagc tctgggacga gcggatgagc accgcccggg
    12181 ccctcgccgc tatctgggaa cagggcggct ccacccgcgg ccgcaagcga gaggtggatg
    12241 ccttggccgc gtcggtgctg ctgcagcact ttctggacgc gcggcgaaat aggacggaga
    12301 ggacggaaaa gacggagagg acggaaaggt gaaggcccgc gttcccgtcg tcttcgccct
    12361 cttcgtcctc tccgtcctgg cctgcagcgg ctccgcccag agcgcccggg tgatcttgcc
    12421 gcccggggcc accttcgcgg cggtgaccga cagcctggcg gctcatcgtg tggtcagcca
    12481 tccgcgctgg ttcaagttgc tcgcccggat gcggggagtg gaccgttccg tgcatgcggg
    12541 cgtgtacgag ttcccggccg gtactccgcc ctggacggtc ctcagcatgc tggcgcatgg
    12601 caagaaggcc gctctccgat tcaccgtgcc ggagggtctg accattctcg acgtggcgga
    12661 gctcgccgcc gcgcgcctgg gaattccggc ggactcgttt gtcaccgcgg cgcaggatgg
    12721 caaggctgcc gcggcgctgc tcggaatacg tgtcacctcc ttcgagggat tcctccgccc
    12781 ggagacatac atccttccgg ccgacatcaa tgcccctgag ctgatccggc tcatggccga
    12841 agggttcaag tccgagtgga agcccgagtg ggatgcgcgg ctcgattcgc tgaagatgag
    12901 ccggctggcg ttggttacgc tggcgtccat cgtggagggt gaggcaaagg cggacgagga
    12961 acgagagatc atcgccggcg tatatcggaa tcggctccgg atcgggatgg cgctccaggc
    13021 cgatcccacc gtgcaatatg ccatcagcct caagcgtggc aggcgcaagc cgcgcctctt
    13081 ccagaaggac tatcagatca agtcgcccta caacacgtat ctgtacccgg gactcccacc
    13141 cggcccggtg aactcgccgg gtcggcgaag cctcgaggcc gccctctacc cagccgacgt
    13201 gcggtatctg tatttcgtgg ccggacccga cggccgccac gtcttctccc gtacctatgg
    13261 cgagcatctg cgggcgatca ggaagctcag gcgtacgggg aaggggttgt caccctgatg
    13321 acatccctcc ttgaagcatt accgaatacc ttctggtagc tgcttcgacg tcagccgcac
    13381 cgagaatgcc cgataccacg gccaccccag taccgcccgc agccaggact tgtggaacat
    13441 cctccggtct caccccaccg acggcaatgc acggcttgcc gttggcaagt gcaaccagcc
    13501 gttgaaagcc ctccgggccg agcccgctgc cggcgtcctc cttcgtggca gtgtcgcgcc
    13561 aggggccgat tccccagtaa tcggctgcac cggccttcct cgcctcggct tcgcttccca
    13621 ccgaagctcc gatgatgaat ccccgcggcg cgatccgccg gacaagctcc accggcatgt
    13681 catccgggcc gaggtgaatt cccgccgcgc ctgtggctat ggcgacgtcg ggccggtcgt
    13741 tcaccaacac tggtaccgtg agtgcctgca tcaaaccccg aaccatttgg accagctcgc
    13801 gcccttccgc ctgcttcagc cggagctgca ccgaggaaac gcctcctcgc tcggcggcga
    13861 gcgcgagtgc aaccaggtcg cgtctctgca ccaggcggtc gtcggtcacc agcatcaggc
    13921 gcaggagtgc cgctacatta tctgccatga cgccccccgt acgcctccac ggaattcgcg
    13981 gagccactac cgtggctcgc aacgaccctg atgagatcct cgcggctacc gacgagctgc
    14041 tgcacacgct gatcgaggcc aacgagcttc agcctgacga catcgtgagc gccctcttta
    14101 cggtgacgag agatctggat gccgccttcc cggcacgggc ggccgaggag ttcggctgga
    14161 acatcgtggc gctgctccac gcaaccgaga tccccgtgcc gggatccctg ccgaagtgca
    14221 tccgcctcct ggtgcacgcc tacaccggcc ggagccgcgc ggaaatcaag cactgctacc
    14281 tgcgcggggc cacggttctc cggccagacc gggcgtgacc gccgttcggg tcactgcccg
    14341 cggcgccgaa cgctggactc ggggacaccc ctggatctac cgcagtgaag tactggacgg
    14401 acccgacggc ccaggcctgg tggaggtgaa ggaccaacgg gggcgtttta tcggacaggg
    14461 actgtactcg ccccgctcgg agatccgatt aaggctgctg gagcggaccg atcggccggt
    14521 cgatgcgagt tggtggcgcg agcgtctggc ggccagtgcg gcgcagcgga gccatatcga
    14581 tgccacggca taccgggtag tccatggcga gggtgacgcc attccctcgc tcgtggtgga
    14641 tcggtacgat cgctggctcg tggtccagat tctgtcggcc ggcctcgaga ccatgcgaga
    14701 cactatcatc gcggcactgg tcgagtcgct ggatccgcaa gggatcctcc tgcgcaacga
    14761 cgccccggtg cgcagccgcg agggtctttc tctcgagccg gtgctgggct acgggtccgt
    14821 gccgagcgag atcgaggtgc gcgaggggcc ggtgcgatat ctggccgcgc cgtgggaagg
    14881 gcagaagacc ggcgctttcc tcgatcagcg ccccaaccgg ttgctcgcgg gcaagctcgt
    14941 ggctcccggc gggcgggccc tggattgctt tgcctaccac ggatccttcg ccctgcatct
    15001 ggcgcggcgg gcagccagcg tgctcgccct cgatgccagc gccgaggcac tggagcgcgg
    15061 tgccgccaac gcctccctca acggcctcgg caacatcgag tggcgcgtag ccgatgtctt
    15121 cgaaagcctg cgcgagctcg agaggtcgcg ggagcgcttc aatgccattg tgctcgatcc
    15181 gccggcgttc gccaagtcca aggcgtcggt gcctgctgct ctccggggtt atcgcgagat
    15241 caacctgcgg gccatgcgga tcctcacacc gggcggcatt ctcctgaccg cctcctgttc
    15301 gtttcacgtg cggctgcccc aattcctcgg catgctggcc gaagccgccg gcgacagcgg
    15361 ccgacgcatc gtgatggatc gcattctggg ccctggagac gaccatcccg aggtgctgac
    15421 gattccggag acggggtact tgaagggcgc ggtggtgagg gcagtctaga gtcacgagtc
    15481 aagagtcacg agtgccgacg cccggcgcgc gactcgcgac tcgcgacttc tcgagaaatc
    15541 gttgacactc caccccacga ctaccaactt ccaccatgcc cagcgtagca gactcacggg
    15601 aaaaatcgtc cggagtacgc cgggtgcttg gcggcatcct cgtcgccaac attgtcgtcg
    15661 tggtcatcaa gtttaccgtc gggctcgata ccaattcgct ggccgtcttc ggcgatgcgc
    15721 tccaatcatc cgtcgacgcg gccaacaacg tgatcggcat tttcgtggtg cggctggcgt
    15781 ccaaggcgcc cgacgaggat cacccgtatg gacacgccaa gttcgagacg ctcggtgctc
    15841 tgctcatcgc cctgttgctg gcgctctcga tcttcgagct cgtccgcggg gcgctggccc
    15901 gcctcatgtc gggtgccccg cccctgaacg tctcgagcac cgcactcgga ctcctcgtct
    15961 tcaccctcgc ggtgaacatc ggcgtcgtct ggctcgagat ccgtgccgga cgccggcttc
    16021 ggagcgacct tctccttgcc gatgcgctcc acaccagaac cgatgtcttc atcaccctcg
    16081 gcgtgctcgg cggcctggct ctcgcccgcg ccggccttgc ctgggccgac ccggcgcttg
    16141 ctctcatcgt ggcggtgctg gtaggccgcg caggttacca gatcctgcat cgggccatcc
    16201 cgagcctggt ggacgagcgc gccttcgacc agacgaccat ccagcgggaa gctgaaggcg
    16261 tggctggggt ggtctccgcc tacgccatcc ggtcacgacg cgccggcgac cggcgctttg
    16321 ccgagctcac catcgcggtt gatggaggag ctgacgtcgc cagtgcccac cggatcgccg
    16381 accaggtcga ggcgagattg cgggacagcc tccagctcga tgaagtgacg gtacacgtcg
    16441 agccatgctg accgctgcgg aagttcgcca ggcacaccga cggcgacggt cgccgtactc
    16501 cgacaagcag cactaccagg agtacatcct tcagcggatc gagggctaca agaactcgat
    16561 cggccgggac gagttgctcc ggctgggcga cgaggcggcc tccgagctcc aggccacgtc
    16621 cgaaggacag ttcgttctca ccgaggtgct catgctcgag tcagtggacc ggctcatcat
    16681 gaagcgcctc tccctccggc cgtaccgccg ctggcggcag cagttcctcc ggctgcgggc
    16741 cgctcagcgc acccccaccc actggggtgt cgagcccaat tgcccgctca cccccctgct
    16801 gccccgcatc gagccggaag ataccgcgct ggtgattggg acccgcgcgg ccccgatgac
    16861 cttcctgctc gcggcgcacg atgccgccgt cacctttctc gcggacgatc tcggctgtgt
    16921 cgaacgagtg gaatcgaaga tggcggagga agcgctttcc agcgtcttcg agagcttcgt
    16981 gacccagctc gaccagccgc tgcctgaatt catgagcttc ctcgccggct tcgacatcgt
    17041 ggtgctcgat ccggaggtcc tggtcgatct atctgccccg ggccgcacag agctcgttca
    17101 cgaccttcag cagcgcagcc gaccccaggg catccacgtg atcctgccga gctgtccagc
    17161 tttggcaccg gacgcgctgc gaggcatgta cgacggctgg actcaggagg aagagctcaa
    17221 gcggcgccgt cgcgccgact cgaaaggagc cccggggctg atcctctgca agcccgtgtg
    17281 tccgccggac acggcgtgat ctcctgggtc ccgagtcgga gcgacacgta cagcctgata
    17341 cgccccggta agcccttgcc cacctgatag ttggcgcgtc ttatcacgcg gcacgaacgg
    17401 tgctgctcca cggggatgca gcctttcccc ctttagtgag gagcgagccc gtgaccagtc
    17461 ttcccctcgt cgcccagtcg gagcctctgg gcatcgtgat caggagcggc gcaccgaagc
    17521 cccagacggt tcggttctgg gcctacctgt gggccaccga tgatgacgac accagggagt
    17581 tgcactggca tcagcgggtc cccgccgagc acgccgcgta gcaggcccgc acgggccgtg
    17641 cggcgtgccg aaacgccccc gagctccggt tcgggggtgt ttgtatttcc aatcccttgc
    17701 tccgcaccaa tttcccgtct aaactcgaat tacccacttc ttccctgacc ggttgctcat
    17761 gccgacgctg accctcaacg gcaaatccgt ttctttccaa cccggcgaga cgatccttga
    17821 agccgccaga ggggccggcg tcgacatccc cacgctgtgc tggtacccca agctgcccat
    17881 cgtgggcaac tgccggatct gtctggtatc ggtccagggt cagaacaagc tgatccccgc
    17941 ctgcgcagcc ccggccgccg acggcatggt ggtggagacc gaatcctcgg ccgcggtcga
    18001 caatcggcgc ggcgtgctcg acttcctgct ggagcgctac cccggcgagc acctcgctaa
    18061 tggcggccgg acggatccgc ggaacgagtt cgagcgttac gtggtgcagt acgatgtccc
    18121 cgttcgtact catcacgagc tgccgcttcg caccggcgac gagcgccccg gcgatgtgat
    18181 gatccagcac gatatgagca cctgtatcct gtgcacccgc tgcgttcggg cctgcgagga
    18241 catccaggag gtaggtgtgc tcgatgtagg catgcggggc gaacatgccc agatcatcgt
    18301 gggtggcgac ggcgatccgg atcacgccgg ctgcacctgg tgtggcgagt gtgttcgggt
    18361 ctgccccacc ggtgccatct tcgagttcat tcccaggcag ctcttcggct cggaggcgct
    18421 ccgcgctccg gacaagatcg cccgctcggt gtgcccctac tgcgccgtag gatgtcaatt
    18481 ggatctgcac gtgaagaatg acaccctgat gcgggtgacc tccccctgga tcgaagaggc
    18541 cacgccgaac cagggctcga cctgcgtaaa gggccgcttc gggtacgact tcgcgctgca
    18601 ccgggaccgg ctcaccgccc cacttatccg caagggctgg atgtgccagg atggacagtg
    18661 gacctggacc ggcgaatggc cccggcgccg ggagggcccg tggctcacga tcgaggagaa
    18721 gggcaaccgc aagaagccgc ggccgccgct tcgtcaagtt ggcaagccgc ccctcaccgg
    18781 cgtgccccag ctggaggaag acgatgtgcg cgaccgcgtg gccacgccgg caggctggta
    18841 cagcgccttt cgcgaggcta cctgggagga ggccctcagc ctgactaccc agcagatcct
    18901 ccgcatccgg gatgagcatg gtcccgacgc cctaggcgcg ctttcctcgg ccaagtgcac
    18961 caacgaggat aactacgcgt tcatgcgcat ggttcgaggc gcattccgca ccaataacgt
    19021 ggaccattgc acccggctat gtcactcgac ttcggtggca gcgatgaacc gtgcgctcaa
    19081 cacggccgcg gcctcgggat cgatgcggga gatcgaggag gccaccgacg tgatcttcat
    19141 cgccggagcg aacaccaccg aatcgcaccc ggtctttggg gcgctcatca agcgagccgt
    19201 tgcgcgaggc gccaagctga tcgtggccga cgtgcgcaag gtggagctcg ccgggctggc
    19261 cgacatccac ctccagatgt atcccggctc cgacgtcgcg ctgttcaata ccatgctgca
    19321 ccacatcatc gacgccgggc tcaccgaccc cgagttcatt cgggatcgca cccgcgagtt
    19381 cgccaaggt
//
LOCUS       DASYRV010000181        10433 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1729749, whole genome shotgun sequence.
ACCESSION   DASYRV010000181 DASYRV010000000
VERSION     DASYRV010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10433
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1729749"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1277)
                     /locus_tag="VGQ24_04560"
     CDS             complement(<1..1277)
                     /locus_tag="VGQ24_04560"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEV8454137.1"
                     /translation="MPSVLERLQDGLPPTFIVERELASGGMGTVFLGHDRALDRRIAI
                     KVLRPELSTAIAVERFVREAQYLAGLNHPNIVPVHLTGHAGGLAYYIMDYVDGETLDT
                     RLARGPLTVSEVIGLGSDLLSALDAAHGKGIIHRDIKPANIFLVGGRAMLGDFGIARG
                     LDEDGEALTRTGQIIGTLAYMAPEQLSGSRVTARTDLYAVGLVLYQACTGRRWGLLAN
                     PELANWAGVPPSLAAVLRTALQPAADDRWDSARAFARALTGRRARLRLARLSSLIPLA
                     ALGLYAAVYWLWPEAKPQSSNVAIYPFEVAGLSDTVLGSQLARLTASYLEALPGVSVA
                     PVRTTFHNWRVSSLPPGERLVRLTQGPSGAEYGVWGVVRPAENGVEVQLQAVTARGEP
                     VLQAVVRGDPANRTGLGDLLALQIVRKIFPRSQR"
     gene            1441..1581
                     /locus_tag="VGQ24_04565"
     CDS             1441..1581
                     /locus_tag="VGQ24_04565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454138.1"
                     /translation="MTVMLRCLGCGFSFTVTYPQAGQIEANTLAVACGHCRGTRWSSQ
                     AA"
     gene            1598..2050
                     /locus_tag="VGQ24_04570"
     CDS             1598..2050
                     /locus_tag="VGQ24_04570"
                     /inference="COORDINATES: protein motif:HMM:NF014373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HEV8454139.1"
                     /translation="MELEPRAELGLLLRLVVAGALAAVLGWERESAHKPAGLRTHMLV
                     GIASALFTVLAELAVTQFPGEGGGLRSDPIRVIQAVSIGIGFLGSGVIFVSKSGDSVR
                     GLTTAASIWATAAIGIAVGLQHYVLAIGATLLLMLVLRGMRRFEDPER"
     gene            complement(2070..2141)
                     /locus_tag="VGQ24_04575"
     tRNA            complement(2070..2141)
                     /locus_tag="VGQ24_04575"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2107..2109),aa:Thr,seq:cgt)
     gene            complement(2154..2235)
                     /locus_tag="VGQ24_04580"
     tRNA            complement(2154..2235)
                     /locus_tag="VGQ24_04580"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2199..2201),aa:Leu,seq:gag)
     gene            complement(2287..3846)
                     /locus_tag="VGQ24_04585"
     CDS             complement(2287..3846)
                     /locus_tag="VGQ24_04585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="filamin/ABP280 repeat domain-containing protein"
                     /protein_id="HEV8454140.1"
                     /translation="MQLGLVGCGGDDLLLPSAGQPAKISVVSGDRQTGTVGQPLGEPI
                     VVVVTDPENRPVEGIEVAFVVPPGATIAPNDTVATGADGRATVNYTLSTSSGDQVVEA
                     RAKPVVPSSSLTTTFTATAMPEAAVALVLAGGDAQRGEVSTALADSLAVRAVDRFGNG
                     VAGVEVTWEAVGGSVSAASVVTGADGRSAVERILADQPGTYGTTAAASGLDGSPVSFT
                     ATAIAAPSPALVLVTQPSSTASAGVPFAQQPELQLQDPSGAPLNRADVRVTVGIANGG
                     GSLGGGTSARSDASGRVRFDDLSIRGEPGTRTLIFAAEGFSPTISSPIVVAPGPPSPE
                     RSSATVPDGTAGAATSISISLEDEFGTRVEGAAGSITVTVTGANQVAALPVTDQGNGS
                     YSASYTPTHAGTDQVDVRVNGNRLDDSPFTSNVVPGPASPATTTAEITTTGILFTRVD
                     VIVTTRDAQGNLIGKGGDVVEVQLNGANIGAIDDNGDGTYSTSFITFGSVETIGITLN
                     GQPIAGSPFRP"
     gene            complement(3890..5248)
                     /locus_tag="VGQ24_04590"
     CDS             complement(3890..5248)
                     /locus_tag="VGQ24_04590"
                     /inference="COORDINATES: protein motif:HMM:NF014428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEV8454141.1"
                     /translation="MQQLFRGLGRLGVPLCTLFLLARCGGSDLTLPSETAPADLALLN
                     GNNQNGSAGEQLANPLVVKVTDRRGEPVPGQRVAFALVTEAPGAEVVPDTAETGSNGT
                     AEARWRLGSVSGTQRVVARVVGIDALEVTFDAAVGSGGAVRLEAVSGDDQTAPVGTAL
                     GDSLVVRVLDAFGNPVAGVGVEWEANGGSVDPGSVTTGSDGRAATYRILGSSAGSQTA
                     TASSSGLEGSPVTFTSHAVAGSANELVRVSGDNQSAPPGTELPDPLVVRLVDSQGNGV
                     PNHPVSWVVGAGGGHVESSNSNTDGDGEARTRWTLGSSGTNTLNAVVSGVGVVTFTAL
                     ATNGGGGGGGGGGGGEPVRLGFRVQPSDTEEKKTITPPVEVVVLDQNGDPVTSQEIEV
                     KLDLTGDKDGRLKGDTRERTESGVARFSDLKVEREGDYRLRASADGLPSVDSDEFEVH
                     DD"
     gene            complement(5349..6428)
                     /locus_tag="VGQ24_04595"
     CDS             complement(5349..6428)
                     /locus_tag="VGQ24_04595"
                     /inference="COORDINATES: protein motif:HMM:NF037144.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEV8454142.1"
                     /translation="MLRVIRLESFGAFLCALASLAGCGGSELVLPAEPPTTTPPPSAF
                     RIEPISGDDQSAIVGTVLSDPLSVRVSTDSGNPVEGVTVSWAAANGGSVSAATSTTDI
                     EGVARVLRTLGPTPGPYVTQAEAPGLSGSPVLFSAMALPANKAPTAGDDEYSSNEGHG
                     NILSVGPSNGVLKNDVDPEGGALTASNASDPPNGVVTLNSDGSFSYNPEVDFFGDDQF
                     TYRARDPDGKSSTATVTIHVAPVNDRPFFSDAGDPSPVHWYDGPQRIEGWATDISPGA
                     ANETDQILEFQVIGNSSPWLFTADGQPAVTRNDSQSAEGALTFTPSGIVGGAVITVVL
                     KDNGGTASGGGDTSGPHSFTIWIGY"
     gene            complement(6518..8275)
                     /locus_tag="VGQ24_04600"
     CDS             complement(6518..8275)
                     /locus_tag="VGQ24_04600"
                     /inference="COORDINATES: protein motif:HMM:NF027952.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEV8454143.1"
                     /translation="MANRLPGFLVVGLSLGFAACGGDSLTLPPTTGTLEITTSTTGSP
                     PDADGYTLQVDAQQPQAIGSTATVTVEELTPGAHSVVLTGLAANCSVSGENPRAVNIA
                     AGETTTSTFELTCSATTGALEVTTQTSGPSPDPDGYAISLDGTEMGPIGPAAVVTLNS
                     VVPGSHVVGLAGLAANCQVDGGNLQAVTITSGATATVTFAVTCVALPPEVGTLRITTT
                     TGGPNPDTGYEFAVDGGQTQPIGPNSSATVASISAGNHSVVLSDVAANCTVDGGASKD
                     VIITAGATTTLNFNITCSLLPPTVGSIHVTTTTTGPDQDANGYAVKVDGGAIQAIEVT
                     GEVSFANITPGSHTVRLMDVAANCSVDDDSKTVTVTAGATAEVGFAITCTPIPPSASK
                     SSVSANPDNFGAGLGSSTITVTVKDASGNPLDGVTVMPSSTGTGNVFAPTSGPTDGNG
                     VATFSFSSTVAEKKTITVVAGGVTLNDKPVITVFPLETTTTITDVDPEPSTAGVPFTV
                     TFTVAGEGGTTPTGGTVTVFSQEESGTVGCVNVPVSDGSCDLTLTMSITHHLQAVYSG
                     DSQFNGSTSAVFTHEVTSP"
     gene            complement(8626..9357)
                     /locus_tag="VGQ24_04605"
     CDS             complement(8626..9357)
                     /locus_tag="VGQ24_04605"
                     /inference="COORDINATES: protein motif:HMM:NF014428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEV8454144.1"
                     /translation="MPHTTPLFVGRALVLLMAGAIGCGSDLLWPDPPGGGENVALTKV
                     DGDQQVGTVGEPLPAPLVVQVLTAREQPASGRKVAFEVTSDPAAGEVSPDTAVTNDAG
                     QATARWVLGTSPGSHVVMAHLVGGEADNQSAEFRAAAKAAAPDTLRPASALAQPGRRS
                     REVDTTPVVHVVDRFGNPVPDVPVAWQVTAGAGQVEEPITATDADGNASAHWTLGDRI
                     GLHRLTAAIGNVSGSPVTFTATVLF"
     gene            9723..10415
                     /locus_tag="VGQ24_04610"
     CDS             9723..10415
                     /locus_tag="VGQ24_04610"
                     /inference="COORDINATES: protein motif:HMM:NF014193.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SURF1 family protein"
                     /protein_id="HEV8454145.1"
                     /translation="MRVPSRLLLLGCFVAVALVCARLGLWQVHRLRERRAVNAAALAA
                     RSKPPVTMDKDEPTSAALIDRRVVASGRYDDDRAIILRGRVYQGVPGVEIVSPLMLDH
                     GQSAVLVNRGFVPTPDAFTVDPDSWREPGTVRVEGIALPIGSAGGAPLQRGEETTWAR
                     LDLEALRARLPYPISPVYVRQLPDSTLPRFPRRLEPLALDDGPHLSYAIQWFSFSIIE
                     VVFGIVIVRKKR"
BASE COUNT         1790 a         3366 c         3479 g         1798 t
ORIGIN      
        1 cgctgggaac ggggaaagat cttgcgcaca atctggagtg ccaacaaatc accgagcccg
       61 gttcgattgg cagggtcgcc ccgcaccacg gcctggagca ccggctcgcc ccgggcagtc
      121 accgcctgaa gctggacttc gaccccgttc tccgcgggac gaacgacccc ccacacccca
      181 tactccgcgc cggacgggcc ctgggtcagc cggacgaggc gctcgcccgg cggcagtgag
      241 gacacacgcc agttgtggaa tgtcgtacgg accggcgcaa cgctgacgcc cggcagcgcc
      301 tcgaggtagc tcgccgtgag ccgggcgagc tggcttccga ggacggtgtc ggagagtccg
      361 gcgacctcga atgggtatat cgcgacattg ctcgattggg gtttcgcctc gggccagagc
      421 caatagactg cggcgtacag accgagtgcc gcgagaggaa tcagggagga gagccgagcc
      481 aggcggagcc gggcccgtcg gccggtgagc gcccgggcaa aggctcgcgc cgagtcccag
      541 cgatcgtccg ctgccggttg cagcgcggtc cggagtactg cggccaagct cggcgggacg
      601 cccgcccagt tggccagttc cggattggcg agcagacccc agcggcggcc ggtgcacgcc
      661 tggtagagta ccagaccaac ggcatagaga tcggtccgtg ccgtgacccg cgacccgctc
      721 agctgctcgg gcgccatgta cgccagcgtc ccaatgatct ggcccgtcct ggtgagcgcc
      781 tcgccgtcct catccagccc tcgggcgatg ccgaagtcgc ccagcatcgc gcgtccgccg
      841 acgagaaaga tgttggcggg cttgatgtcg cggtggatga tgcccttgcc gtgcgcggcg
      901 tcgagcgcgc tgagcaggtc gctgcccagt ccgattacct cggacacggt gagcggcccc
      961 cgcgccagac gggtgtcgag ggtttccccg tccacatagt ccatgatgta gtaggcaagc
     1021 ccgccggcgt ggcccgtgag gtgaaccgga acgatgttgg gatggttgag gccggcgagg
     1081 tactgggctt cgcgcacgaa ccgctcgacg gcgattgcgg ttgacagctc cggccgcagc
     1141 accttgatgg cgatcctccg gtcgagggcc cggtcgtgtc cgaggaacac cgttcccatc
     1201 cctccgctgg cgagctcacg ctcgacgatg aaggtgggtg gcagaccgtc ctgcagacgt
     1261 tccagtaccg atggcatcgg ggtgtcgcgc tcgattgtgg tgggctagct caaaagataa
     1321 gctccggagc ggcggccggg agcaggtgtg aggccggacc gccccagcgt gtggccaggc
     1381 gcactgcggc cctgggcacc aaggtgtaat gctctctctg gtgcctactg aggagagccc
     1441 gtgaccgtca tgcttcgatg cctcggctgc ggattcagct tcaccgtgac ctatccccag
     1501 gctggacaga tcgaggccaa caccctcgcc gtcgcctgcg gccactgccg gggaacccgc
     1561 tggtcctcgc aagccgcgta gacctcccga tcagttaatg gagctcgagc cgcgagccga
     1621 gttgggcctt ctgctgcgcc tcgtcgtggc gggcgcgctg gcggcagtac tcggctggga
     1681 gcgcgagtcg gcccacaagc cggctggtct ccgcacgcac atgctcgtgg ggatagcgtc
     1741 cgcgctgttc accgtgctgg cggagctcgc cgtgacccaa tttccgggcg agggcggagg
     1801 cctacggtcg gatccgatcc gggtgattca ggcagtttcc atcggcatcg gattcctggg
     1861 cagcggggtg atcttcgtgt ccaagagcgg cgattccgtc cgggggctga cgacggcagc
     1921 atcgatctgg gcgacagcgg cgatcggaat cgccgtcgga ctgcaacact atgtgttggc
     1981 gattggggcc acgctcttgc tgatgctggt gctgcggggg atgaggcggt tcgaggatcc
     2041 ggagcggtga gagaaggcgg ggaacgcaga gccactggtc ggatttgaac cgacgaccgc
     2101 tcgattacga atcgagagct ctacccctga gctacagtgg cgggacgtcg gaatgccctg
     2161 gcgcggattc gaaccgcgac gcctttcggc actaccccct caagatagcg tgtctaccag
     2221 tttcaccacc agggcaggcg ggggagcaag atagccgtcg cgcggaggag ggtcaacgct
     2281 gccccgctag gggcgaaacg gactgccggc gataggctgg ccgttgaggg tgatgccgat
     2341 ggtctcaacc gatccgaagg tgatgaagct ggtcgagtag gtcccgtcgc cattgtcgtc
     2401 gatggctccg atgttcgccc cgttgagttg gacctcgacg acatcgccac ccttgcctat
     2461 gaggttgccc tgtgcatccc gcgtggtgac gatcacgtcc acccgggtaa agaggatgcc
     2521 cgtggtagtg atctccgcag tcgtcgtcgc cgggctggca ggaccgggca ccacgttgct
     2581 ggtaaatgga ctgtcatcca ggcggtttcc gttgacccga acgtccacct ggtccgtgcc
     2641 ggcatgagtg ggggtgtacg aggccgagta ggagccatta ccctgatcgg tgaccggcag
     2701 agcggcgacc tgattggcgc cggtcaccgt caccgtgatc gagcctgccg ccccttcaac
     2761 ccgggtaccg aactcatcct cgagactgat cgagattgag gttgcggcgc cggccgtgcc
     2821 gtccgggaca gtagccgagc tccgctccgg cgagggcgga ccgggcgcga cgacgatcgg
     2881 gctcgatatg gtcggggaga aaccctccgc cgcaaagatg agcgttctag tgcccggctc
     2941 gccgcggatg gagaggtcat cgaatctcac ccggccactg gcatcgctcc gcgcgctggt
     3001 gccgccgccg agtgatcccc cgccgttggc gatcccaacg gtcactcgaa cgtccgcccg
     3061 attgagtggg gcaccggatg gatcctgaag ctgaagctcg ggttgctggg caaagggaac
     3121 gccggccgac gcggtcgaag acggctgcgt caccagcacg agcgccgggc tcggcgccgc
     3181 gatcgccgtc gcggtgaacg agaccggcga gccatcgagc cctgaggcag ccgctgtcgt
     3241 tccgtaggtg cccggctgat cggcgaggat acgctccacc gcagatcgcc catcggcgcc
     3301 ggtgaccacc gaggccgcgc tcaccgaccc accgacagcc tcccaggtca cctccacacc
     3361 agccaccccg ttgccgaatc ggtccaccgc ccgtaccgcg agcgaatcgg cgagcgcggt
     3421 agacacctcg ccccgttggg cgtcgccacc ggccagcacc aaggccacgg cggcttcggg
     3481 catggccgtc gccgtgaacg tggtggtcag tgaggacgat ggaacgactg gcttggcacg
     3541 ggcctcgacg acttgatcgc ccgaggacgt gctcagggtg tagttgacgg tggccctgcc
     3601 atccgcgccg gtcgcgaccg tgtcgttggg agcaatggtg gctccgggcg gcaccacaaa
     3661 ggcaacctcg atcccctcga ccggccggtt ttccgggtcg gtgactacca cgacgatcgg
     3721 ctcgcccagc ggctgcccta cagtgccggt ctgacggtca ccgctgacga ctgagatttt
     3781 ggcgggttgt cctgcgctgg ggaggaggag atcgtcgcca ccgcacccga caagccccag
     3841 ctgcaccgcg agcagcagcg gagcgagccg caggcgcggc cacgcgggcc tagtcgtcgt
     3901 ggacctcgaa ttcgtcacta tcgaccgacg gcaggccgtc ggcagaggca cgcaaccgat
     3961 aatcgccttc cctttccact ttcagatcgg agaatctggc cacgcccgac tcggtccgct
     4021 cacgggtgtc gcccttgagc cttccgtctt tgtcgccggt gagatcaagc ttaacctcga
     4081 tctcctggct ggtcaccggg tcaccgttct ggtccagcac cacgacctcg accggcgggg
     4141 taatcgtctt tttctcctcc gtgtcggacg gctggacccg gaagcctagc cgcaccggct
     4201 ctccgccacc accgccccca cctccaccac ctcccccgtt cgtggccagc gcggtgaagg
     4261 tgaccacgcc aacgccggag accaccgcat tcagcgtgtt ggtgccggac gagcccaggg
     4321 tccagcgggt cctggcttca ccatcgccat cggtattgct gttggacgat tcgacgtgcc
     4381 cgccacccgc accgaccacc caactcaccg ggtgattggg aacgccattc ccctgactat
     4441 ccaccagacg aacgaccagc ggatcaggca gctcggtacc gggcggggcc gactgattgt
     4501 caccggaaac gcgcaccagc tcgttggcgc tgccggcgac ggcgtggctg gtgaaggtga
     4561 ccggcgagcc ctcgagaccc gagctggatg ccgtggcggt ctgcgatccg gccgacgagc
     4621 ccaggatgcg ataggtcgcg gcgcggccgt ccgagcccgt cgtgaccgag ccgggatcga
     4681 cactgccccc attggcctcc cactcgacac ctacgccggc aaccgggttg ccgaaggcgt
     4741 cgagcacccg aaccaccagc gaatcgccga gcgcggtgcc caccggggcg gtctgatcgt
     4801 cgccgctcac cgcctcgagg cgaacggccc cgccggatcc aacggccgcg tcgaaggtga
     4861 cctccagggc gtcgattccg accacgcggg ccacgactct ctgcgtgccg ctgacactcc
     4921 caagcctcca ccgtgcctcc gccgtaccgt tcgagcccgt ctctgcggta tcaggcacga
     4981 cctccgctcc aggtgcttcg gtgaccaaag cgaacgcgac cctttgcccc ggaaccggtt
     5041 cgcctctgcg atcggtcacc ttgaccacga gcgggttggc gagttgctcg ccggccgagc
     5101 cgttctggtt gttaccgttg agcagggcca gatcggccgg cgcggtctcg ctcggcaatg
     5161 tgaggtcgct cccgccgcaa cgggccagca ggaagagggt gcagagtggc accccgaggc
     5221 gaccgagacc gcgaaagagc tgctgcacga gagccgattc tgtgaacgtt aaagccgcac
     5281 gatatcatag gttaccgcgc ggctggcggg tccgataggg cgtggatcac agaggggaca
     5341 gggcgccgct agtacccgat ccagatcgtg aagctgtgag gaccactggt atcgccgcct
     5401 ccactggcgg tgccgccgtt gtccttgagc actacggtga tcacggcgcc gcccactatc
     5461 cctgagggag tgaaggtcag cgccccctcg gcggactggg aatcgtttct tgttaccgcc
     5521 ggttgcccgt cagcggtgaa cagccatgga ctgctgttgc cgatcacctg aaactcgagg
     5581 atctggtcgg tctcgttcgc tgctcccggc gagatgtccg tggcccagcc ctcgattctc
     5641 tgcggtccat cataccaatg cacgggagag ggatcgcccg cgtcgctgaa gaacggccga
     5701 tcattcaccg gggcaacgtg aatcgtcacc gttgccgtgc tcgacttccc atcagggtct
     5761 cgagcccgat aggtgaactg gtcgtcgccg aagaaatcga cctccgggtt gtagctgaac
     5821 gatccatcgg agttcagggt aacgacgccg tttggtgggt cactggcatt ggatgccgtc
     5881 agggctccgc cctcgggatc gacatcgttt ttcaggacgc cgttggatgg accgacgctg
     5941 aggatgttac cgtgaccctc gttgctactg tattcgtcgt ccccggcggt cggagccttg
     6001 ttggcaggca acgccattgc gctaaagagc acgggcgagc cgctcagccc gggagcttcg
     6061 gcctgggtca catagggccc gggcgtgggt cccaatgtcc gaaggacgcg ggcgactcct
     6121 tcgatgtccg tggttgaggt tgcggccgaa acgctgcccc cgtttgctgc cgcccagctc
     6181 acggtcacgc cctcgaccgg gttgccgcta tcggtcgaga ctcttaccga cagcgggtct
     6241 gagaggacgg tgcccacgat ggccgactga tcgtcgccag aaatcggctc gattcggaag
     6301 gcactcggtg gcggggtggt ggtagggggc tcagcgggca ggacgagctc gctcccgcca
     6361 cagccagcca ggctggcgag ggcgcacaga aatgccccga aactttcgag acgaatgacc
     6421 cgaagcacga gagccggacc tcttaagcta aagccgcgcg atactatagc ttaccgcgcg
     6481 gcgagtccgg ccgataggat ctggatcaca gggggggtta gggcgacgtg acctcgtgag
     6541 tgaacaccgc agaagtgctt ccgttgaatt gtgagtcccc agagtacacc gcctgcaggt
     6601 gatgtgtgat actcatggtc aaagtcaaat cacaagaccc atcgctgacc gggacgttga
     6661 cgcaaccgac cgtccctgac tcctcttgcg agaagacggt tacggtgccc ccggtcggcg
     6721 tagtaccgcc ctctcctgca accgtgaatg tcacagtgaa cggaacccct gcggtggaag
     6781 gttctgggtc gacgtcagtg atcgtagtgg tggtctcgag agggaagacc gtaattaccg
     6841 gcttatcgtt caacgtgacg ccgccagcga cgaccgtgat cgtctttttc tcagccaccg
     6901 tcgagctgaa ggaaaacgtc gctacgccgt tcccgtcggt cggtcccgaa gtcggtgcga
     6961 acacgtttcc ggtgccggtg gaggacggca taactgtaac accgtccaac gggttaccgc
     7021 tcgcgtcctt aactgtgact gttatcgtgc tgctaccgag tcctgcaccg aaattatcgg
     7081 gattagcaga gacactggac ttcgaagcgc tcgggggaat cggcgtacac gtgatcgcga
     7141 agccgacctc cgcggttgct cccgccgtca ctgtgaccgt cttggagtcg tcatctacgc
     7201 tacagttcgc cgcgacatcc atgagacgca cggtgtgtga gccaggggtg atgttggcga
     7261 aggagacctc gccggttacc tcgatcgcct gaatcgcgcc accatccact ttaactgcat
     7321 acccattcgc gtcctggtcc ggacccgtgg tggtcgtagt gacatgaatg ctgccaacgg
     7381 ttggaggaag cagggagcag gtgatgttga aattgagtgt tgtggtggct cccgccgtga
     7441 tgatcacgtc cttcgatgct ccaccatcca ccgtgcagtt cgccgcgacg tcggagagca
     7501 cgaccgaatg gttgcccgcc gagatgctgg ccaccgttgc actcgagttc gggccgatgg
     7561 gctgagtctg ccctccgtca actgcaaact cataacctgt atccgggttc ggaccgccgg
     7621 tggtcgtggt gattcgaagg gtacccacct cgggcggcag tgcgacgcag gttacggcaa
     7681 acgtcacagt agcggtggct ccagaggtga tcgtcaccgc ctgcagatta cccccgtcca
     7741 cctgacagtt cgcggccaga ccggccagtc cgaccacatg gcttccaggg acgacgctgt
     7801 tcaaggtcac cacggcagcc ggcccaatcg gtcccatctc ggtaccatcg agactgatgg
     7861 catatccatc cgggtcgggc gatggaccgc tggtctgagt agtgacttcg agggcaccag
     7921 tggtcgcgct gcaggtcaac tcgaacgttg aggtcgtggt ctccccggcg gcgatgttga
     7981 ccgcccgcgg attctccccc gagacgctgc agtttgctgc gagaccggta agcacgacgc
     8041 tgtgagctcc gggagtcagt tcctcgacgg tgacggtggc cgtggagccg atcgcctgag
     8101 gttgctgtgc gtcgacttgc agggtataac cgtcggcatc cggcggtgac ccggttgtgg
     8161 aggtcgtgat ctccagggtg cccgtcgtag gcgggagagt gagagagtcg ccaccgcatg
     8221 cggcgaagcc gagagaaagg ccgaccacca gaaatccagg gagcctgtta gccatcaccg
     8281 tcaaccatcc tgaccaagtt cgtgaagtga tgcgtgtctc gaccgcaggt agtactggag
     8341 tgagggctgg agtgtagccc cgtgtcccga gcgagaaaag gacctggctc acaacgtgga
     8401 gctaagtcat gccttgacaa cgatttctcc agcgcactcg ccacgcatcg cgcgatacgg
     8461 taaacgggat tcgttatcga gcaggggacg gcgcgagggc gaagcagttt atatgcctgg
     8521 tacagggcct ggtgccggac cgtaagtagc tccattaccg ctacttgggt agagcggcat
     8581 cggccctgtt gtggcattcc tacggcagcg gccctcctcg aaggcctaga agagcacggt
     8641 ggcggtgaag gtcaccggag acccgctgac gttcccgatc gccgcggtca gcctgtggag
     8701 cccgatccgg tcgcccagcg tccagtgggc cgaggcattg ccgtcggcgt cggtggcagt
     8761 gatcggctcc tccacctggc cagcgcccgc cgtaacctgc caagccaccg ggacgtccgg
     8821 cactggattc ccaaagcggt cgactacgtg caccaccggc gtggtgtcga cctcgcggct
     8881 ccgccggcca ggctgggcca gcgcactcgc cgggcgcagc gtgtcgggag cagcggcctt
     8941 ggccgcggct cggaattcgg cactctggtt gtcggcctcg ccgccgacga ggtgcgccat
     9001 gaccacgtga gatcccggcg aagtgccgag aacccagcgc gcggtagcct gtccggcatc
     9061 gttggtgacg gcggtgtcgg ggctgacctc gccggcggct ggatcggaag tcacctcgaa
     9121 ggcgaccttg cggccggagg ccggctgctc ccgcgcggtc aggacctgga cgacgagtgg
     9181 cgccgggagc ggctctccca cggtgccgac ctgctggtcg ccgtcgacct tggtcagggc
     9241 gacattctcg ccgccgccgg ggggatcggg ccataggaga tcgctgccgc agccgatggc
     9301 accggccatg agcaacacaa gggctcgtcc cacgaagaga ggtgtcgtgt gaggcatgcg
     9361 ttcacgctat ctggatgtct ggccggctcg agcggccggg ttgaaggggg ggtccactag
     9421 aatagccacc cccacccgcc atcggtagtg cggcggcggg atctacttac cggtctggaa
     9481 caggacaccg agcccgaagt tgaccagccg ctcggtgtag ccgcctccca ggcgcccttg
     9541 aggtagaaac cggccgaact gaggggatag aactgagcga tgaagagcgc gagaaggcta
     9601 tcagcgtgat caccacgatc agcagtgagg cggtcataga aggcctcccg ctgacgttag
     9661 gtttgagttg cagacacctg cgtgccgcac tcggcgcact tccgcaaagg ccggaccaat
     9721 cgatgcgggt tccttcacga ctgctgttgc tggggtgctt cgtcgccgtg gcgctggtct
     9781 gcgcgcgtct cggcctgtgg caggtgcatc ggctccggga gcgtcgcgcc gtgaacgccg
     9841 cggccctggc ggcacgatcg aagccgccgg tcacaatgga caaggacgag ccgacgagtg
     9901 ccgcgctgat cgatcgccgg gtcgtagcat cgggccgata cgatgacgac cgcgccatca
     9961 tcctccgcgg acgagtgtac cagggcgtgc ccggcgtcga gatcgtctca cccctgatgc
    10021 tcgaccacgg ccagagtgcg gtgctggtga accgcggctt cgttcccaca ccggatgcct
    10081 tcacggtcga ccccgattcc tggcgggaac cgggaacggt tcgggtagaa ggaatcgcac
    10141 tcccgatcgg gtccgccggc ggcgcaccgc tccagcgggg ggaggagacc acctgggccc
    10201 ggctcgatct ggaggcactg cgcgcccggc tgccctaccc gatcagcccc gtctacgtcc
    10261 ggcagctgcc cgactccacc ctgccccgct ttccccggcg gctcgagccg ctggcgctgg
    10321 atgacggccc gcacctgagc tacgcgattc agtggttctc gttttcgatt atcgaggtgg
    10381 tgtttgggat cgtgattgtg aggaaaaagc gttagcggga ctagaacaag cgt
//
LOCUS       DASYRV010000182         1904 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1521613, whole genome shotgun sequence.
ACCESSION   DASYRV010000182 DASYRV010000000
VERSION     DASYRV010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1904
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1521613"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(51..362)
                     /locus_tag="VGQ24_04615"
     CDS             complement(51..362)
                     /locus_tag="VGQ24_04615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454146.1"
                     /translation="MKPGPLSLLLEVEINGSLLVEESMAPGPGGNHVDDDVLTRRAAS
                     KMGRGRWPAHAPIDEVVNALKRAPPAERMRMEEGLRRYAQQVAPRWGQPEPTCPPARL
                     R"
     gene            complement(359..1525)
                     /locus_tag="VGQ24_04620"
     CDS             complement(359..1525)
                     /locus_tag="VGQ24_04620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454147.1"
                     /translation="MSAARCARFQAPNGVVIAPPSPKKRFRFFPALAACLLAGCQESP
                     GAFVDGPESADLAGRIAGHLVVKQGRDTTNNDPRILALSLPDLQRSVVRKYSGADRSL
                     TYTGWVEAASGPDQEGRIAFVEETAFQSKEYVVKSVRLDGADERELFRSYGRGLADTL
                     SLSPSGSRIAYVGDVTDAQMPGALLETGPLQVRDQARGKVLRFGAAVVTQPPSWFPDS
                     KRLALVELVPKEPIAAQIQAGLGADPKFLSGVEHWQRLPVIYVLDVETGEKTYLHVGW
                     RPLVSIDGRTVLFRWGSYRLIDVATRTSRRISWPGRWLPPIALLPGGLLIYPGLPTRG
                     TEVRRIKYGSFSVGSVLGSIKVADLETGRFQTLIEYADPREKFSFGRVRVREAR"
     gene            complement(1650..>1904)
                     /locus_tag="VGQ24_04625"
     CDS             complement(1650..>1904)
                     /locus_tag="VGQ24_04625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454148.1"
                     /translation="DMVEARRILVQGAICGGFVAAGLMFLIFWHIVRSSPNAGAMVRG
                     QFQPYQDEPSWHLMAAGGLILLAAGLGLLAWAWRQLGKPR"
BASE COUNT          346 a          650 c          602 g          306 t
ORIGIN      
        1 gtgtcgaacc gcgcgatatc ccgagatcgt gtcctcctgg tcggacttgc tcacctcagg
       61 cgggccggcg gacaggtggg ctctggctga ccccaccgtg gtgccacctg ctgcgcgtat
      121 cgcctgagcc cctcttccat ccgcatgcgc tcggccggag gagctctctt cagcgcgttc
      181 acgacctcgt cgatgggggc atgggcgggc caccgtccgc gtcccatctt cgaggcggca
      241 cgtcgggtga ggacgtcgtc gtccacgtgg ttgcccccgg gccctggtgc catggattcc
      301 tccacgagaa gtgatccgtt gatctcgacc tcgagaagga gcgagagagg tcccggcttc
      361 atcgcgcctc gcgaaccctg actctcccga agctgaattt ttcccgcggg tcggcgtact
      421 cgatgagcgt ctggaaccgc cccgtctcga ggtcggccac tttgatggaa ccgagaactg
      481 acccaacgct gaaactcccg tacttgatgc gtcggacttc ggtacctcgg gtcggcaacc
      541 cgggataaat cagcagtccg cctggcaaaa gcgcaatggg cggcagccac ctgccgggcc
      601 agcttattct gcgcgaagta cgagtcgcga catcaatcag ccggtaactg ccccagcgga
      661 acaagaccgt gcggccatcg atggaaacca gcggtctcca gcccacgtgc aggtaggtct
      721 tctccccagt ctcgacatcc agcacgtaaa taaccggcag tcgctgccag tgttcgacgc
      781 cgctgaggaa cttcgggtcg gcacccagac cggcctgaat ctgcgcggcg atcggctcct
      841 tgggcacaag ctcgaccaaa gcgaggcgct tgctgtccgg gaaccaggat gggggttgcg
      901 taaccacggc agcgccgaaa cgcagcacct ttccgcgagc ttggtctcgg acctggagcg
      961 gcccggtctc cagcagcgcc cccggcatct gcgcgtcggt cacatccccg acatacgcga
     1021 tccggctgcc ggagggggag agcgaaagcg tgtcggcgag gccccggccg taggaccgga
     1081 acagctcgcg ctcgtcggcg ccatccagcc ggacgctctt caccacgtat tccttgcttt
     1141 gaaaagcggt ctcttcgacg aaggcgatcc ggccttcctg gtcgggcccg ctggccgcct
     1201 cgacccagcc cgtgtaagtg agggagcgat cagcgcccga gtacttccgc actaccgagc
     1261 gctgaaggtc cggaagcgag agcgcgagaa tgcgggggtc gttgttggtt gtgtcgcggc
     1321 cctgtttcac gaccaggtgg ccggcgatcc ggccggcgag gtcggccgac tcgggcccgt
     1381 ccacgaaggc gccaggcgac tcctgacatc cggcaagcag gcacgccgcc agggcgggga
     1441 aaaaacgaaa acgtttcttc ggcgacggcg gagcgatcac gacgccgttc ggcgcctgga
     1501 aacgtgcgca ccgcgcggcc gacatcgatc aggataccgg ccagcctcgt tcccgaaacg
     1561 gcgcccgagc atgggggaga tcacccattc gcacagcagg agcgtcagca ccgccgctgc
     1621 aacgatgccg accgtctcgg gcgagagcct catcgtggct tcccaagctg gcgccaggcc
     1681 caggcgagca agcccaagcc cgcggcaagc aggatcaggc cgccggccgc catcaggtgc
     1741 cacgacggtt catcctggta gggctgaaac tgtccccgga ccattgcccc ggcattcggc
     1801 gacgacctga caatgtgcca gaagatcagg aacatcagcc ccgccgcgac gaatccgccg
     1861 cagatcgccc cctggacgag aattcgtctt gcctcaacca tatc
//
LOCUS       DASYRV010000183         1853 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1730862, whole genome shotgun sequence.
ACCESSION   DASYRV010000183 DASYRV010000000
VERSION     DASYRV010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1853
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1730862"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            93..1517
                     /locus_tag="VGQ24_04630"
     CDS             93..1517
                     /locus_tag="VGQ24_04630"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEV8454149.1"
                     /translation="MARGQSGGWRARDILRTLAIITGFYIALQALWVGRAVVLLTLLG
                     VLFGLALTAGVDRLERSRVSRPVGTALIVLAFLGVLVGLGALTAPSITGQLQELKTQL
                     PEAIGKIQRWVQERQAGVTEVLEQVAPPPADSAGRLDEGGKPREGAQNGEPDEKAQDG
                     KGGISLGQGLAEQIAGVSRHLFGFFSSTLVALGAFVLILFVAIFVAIDAETYHDGLMH
                     LFPHDTRERAGEVLSATAAMLRRWLLAQFISMMAVGALTTVVLLLLGIKAAVALGIIA
                     GILEFIPIAGPILASVPAIVMGFLDGPEKAVYVALAYVVVQQLEANLLYPLIMKKGLE
                     LPPVLTLVTQGVMSSVFGFLGLLVAVPMLAAVTVPIKMLYVRDVVGDKVKLPGQEDGK
                     AGKAGTNLTLLLVTLAPLAGCSSTEQKIERNNTTIQSWEATVRLTKQLRARGAVPPEY
                     ARQTLDAAARELERARRSSERVLR"
     gene            1514..>1853
                     /locus_tag="VGQ24_04635"
     CDS             1514..>1853
                     /locus_tag="VGQ24_04635"
                     /inference="COORDINATES: protein motif:HMM:NF013715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEV8454150.1"
                     /translation="MSKLLEIALGLITGIAGFLETGSLATSAQAGAAFGFQLIWAIAL
                     GTICIAFLVEMGGRLAAVSKHTLPDAMRERFGVRFFTVPLVTVVLVSLLVLASEIGGV
                     ALALQLATGIR"
BASE COUNT          299 a          570 c          618 g          366 t
ORIGIN      
        1 gtgccggctg gtctggccta cctgattgcg acactggcca cagcggcgag ctggctcaag
       61 gagccggcac ccaagccggc tctggttcgg taatggcccg cggccagtcc ggaggatggc
      121 gggcccgcga catcctccgc acgcttgcga tcatcaccgg cttctacatc gcgctccagg
      181 cgctctgggt cgggcgcgcc gtggttctcc tgacactcct cggagtgctg ttcggcctgg
      241 cgcttacggc gggagtggac cggctggagc gctcgcgggt atccagacct gtcgggaccg
      301 cgctcatcgt gcttgccttt ctgggcgtac tcgtcggcct gggagccctg accgcgccga
      361 gcattaccgg ccaacttcag gagttgaaga cccagttgcc ggaggccatt ggaaagatcc
      421 aacgctgggt ccaagagcgg caagcgggcg tcaccgaggt tctggagcag gtagccccgc
      481 cgccagccga ctcagccgga agactcgatg aaggcggcaa accccgtgaa ggggcccaaa
      541 acggagagcc ggatgagaag gcccaagacg gcaagggcgg catatcgctg ggccagggcc
      601 tcgccgagca aatcgcagga gtcagccggc atctgttcgg cttcttctcc tccacacttg
      661 tggcgctcgg tgccttcgtc ctgatcctct tcgtggcaat cttcgtggcg atcgatgcgg
      721 agacctatca cgatggcctg atgcatctct tccctcacga cacccgggaa cgcgctgggg
      781 aggtgctgag tgccacggca gcgatgctcc ggcggtggct cttggcccaa ttcatcagca
      841 tgatggcagt cggagctctc accacggtgg tgctcctgct tctcgggatc aaagccgcag
      901 tggcgctcgg tatcatcgcg ggaatcctgg agttcatccc gatcgctgga ccgatcctgg
      961 catccgtgcc ggcgatcgta atgggctttc tcgacggccc agagaaggcg gtctacgtcg
     1021 ccctggccta cgtcgtggtc cagcagttgg aggccaacct gctgtatccc ctcatcatga
     1081 agaaaggcct cgagcttccg ccggtcctca ctctcgtcac tcaaggtgta atgtcgagcg
     1141 tgttcggttt cctgggtctt ctggtcgcgg ttcccatgct tgccgctgtc accgtcccga
     1201 tcaagatgct gtatgtgcgc gatgtggtcg gtgataaggt aaagctgccc gggcaagagg
     1261 acgggaaagc cgggaaggct ggaacgaact tgaccttact cctggtgact ctggcgcctt
     1321 tggccggctg ttcctcgacc gagcagaaga tcgagcggaa taacaccacc atccagtcgt
     1381 gggaggcgac tgttcggttg accaagcagt tgcgggccag gggagcggtt cccccggagt
     1441 atgcccggca gacactcgat gctgcggcgc gagagctgga aagggcgcgc cggagctcgg
     1501 agagggtgct gagatgagca agctcctcga gattgccctc ggcctgatca ccgggatcgc
     1561 cgggttcctg gaaaccggct ctttggcgac ttccgcccag gccggcgcgg ctttcggctt
     1621 tcagttgatc tgggccatcg cgctgggcac catctgcatc gcgttcctgg tcgagatggg
     1681 tgggcggctg gccgcggtca gcaagcacac cttaccggac gcgatgcggg agcgcttcgg
     1741 ggtgaggttc ttcactgttc cgctggtcac ggttgttctg gtgtcgttgc tggtgctggc
     1801 ctcggagatc ggcggcgtcg ctctggccct gcagctcgcg acaggcatcc ggt
//
LOCUS       DASYRV010000184         2269 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3600185, whole genome shotgun sequence.
ACCESSION   DASYRV010000184 DASYRV010000000
VERSION     DASYRV010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2269
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3600185"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..240
                     /locus_tag="VGQ24_04640"
     CDS             <1..240
                     /locus_tag="VGQ24_04640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454151.1"
                     /translation="GTVAEQADFLPTISDTTSEALSIGREDDTLVNREQPRLILRCEE
                     GQVGAYLIVGTPAEVESGRVDDRAVPVRLDSAPPC"
     gene            315..1454
                     /locus_tag="VGQ24_04645"
     CDS             315..1454
                     /locus_tag="VGQ24_04645"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HEV8454152.1"
                     /translation="MRIGVMLRHYDQHGGGVKVYTSRLLRALLDLQTEHEFVLLYRNP
                     DLLGTYAGEQGVEEVALAGRSILGWDQLAVPEAVQRHGIDVLFNPKYSIPLRARCRTV
                     WVCHGLDWYVMPWGSKLVDRLSHRFLVPRYARKADAIVAVSEITRRHVMHYLAVPPDR
                     VATVYSGVDDVFRRPLLQSHRDEIRKKYSLPERFLLYAGAIYPPKNFTRLVQAYARVG
                     PERGIPLVIAGGENRFLSEGELREPETLGIKEWVHWPGWVEQEELAGFYAMAEALLLP
                     SIFESCGLPVLEAMAAGCPVVTADRYGTKELAEGAAVLVDPESVESIAGGIRRVLDDA
                     ALRSELVAAGQVRSRDFTWRRCASETLGVLERVHSHSRSPATSIS"
     gene            1464..>2269
                     /locus_tag="VGQ24_04650"
     CDS             1464..>2269
                     /locus_tag="VGQ24_04650"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8454153.1"
                     /translation="MVNAATDSLSVLVNARHLAGPRTGIEVYMEQLLAALGSTGRVQL
                     TALSWEPLNLGLPGVREVLPTRRPKLRPGSLPATLWKLWFDQWQCLSALPRTGGILYH
                     GMDGFLPYSLRRRDRAVVTVHDLGWQAHPELYSRRLRLMYGGLFPWVVRRADRFIAVS
                     RYTADDLVRRAGVPASKIDVVYHGLDPAFTTAGAGRRVSDSPYVLAVGGVSPRKNTRR
                     LIAAFSRWRARGGHRSQHRLLITGTSLEADFEQNGSALPEGVALLGYVDQA"
BASE COUNT          355 a          711 c          777 g          426 t
ORIGIN      
        1 ggtacggtag ccgagcaggc ggactttctg cccacgatct ctgacaccac atccgaggcc
       61 ctctcgatcg gcagggagga tgacacccta gtgaatcgcg agcagccgcg gttgattctg
      121 cggtgcgaag aggggcaggt cggcgcctat cttattgtag gcacgccggc ggaggtggag
      181 tccgggcggg tcgacgaccg tgcggtaccg gtccggctgg attcggcgcc accctgctga
      241 gcagtcggca gcgcggctgg accgccgcgc cggccgccgt gtagcttgcc actcggatct
      301 tcacgggagc ggacgtgcgc atcggggtca tgttgcggca ctacgaccag cacggcggcg
      361 gggtcaaagt ctataccagc cggctgctgc gcgccctgct ggatctccag acagaacacg
      421 agttcgtcct gctgtatcgc aatcccgacc tcctggggac ctatgccggc gaacaggggg
      481 tcgaggaagt cgcactggcc ggccgttcca ttctcggctg ggatcagttg gcggtgccgg
      541 aggcggtgca gcgccacggc atcgacgtcc tgttcaatcc caagtactcg attcccctcc
      601 gcgcgcgctg ccggaccgtc tgggtctgcc atggcctgga ctggtatgtc atgccgtggg
      661 gctccaagct ggtggatcgg ctgagccacc ggttcctggt cccgcgctac gcccgtaagg
      721 cagatgcgat cgtggcggtt tccgagatca cccgccgcca tgtgatgcac tatctcgcgg
      781 taccgccaga ccgcgtcgct acggtctatt ccggagtcga cgacgtgttc cggcgtccgc
      841 tgctccaatc gcaccgggat gagattagga agaagtattc cttgcctgag cggtttctcc
      901 tgtatgccgg tgcgatctat ccgcccaaaa acttcacccg gttggtacag gcctatgctc
      961 gggtcgggcc agagcgtgga atcccgcttg tcatcgccgg gggtgagaac cggttcctgt
     1021 ccgaagggga actacgcgag cccgagacgc tcggcataaa ggagtgggtg cactggcccg
     1081 gatgggtaga gcaggaggaa ctggcaggat tctacgccat ggccgaggcc ctcctactgc
     1141 cttccatctt cgagtcgtgc ggactgccgg ttctcgaggc catggcggcc gggtgtcccg
     1201 tggtgaccgc cgaccgctat ggcaccaagg agctggctga gggagcggcg gtgctggtcg
     1261 accccgaatc ggtggagagc attgccggtg gcatccgccg agtgctcgat gacgcggcgc
     1321 tccggagcga attggttgcg gcggggcagg tgcggagccg ggactttacc tggcgccgtt
     1381 gcgcctcgga gacactcggg gtgctggagc gagtccactc gcactcgcgc agcccggcaa
     1441 cctccatctc gtgatgtcgg gccatggtca acgccgcgac tgactccctg agcgtcctgg
     1501 tcaacgccag gcacctggcc ggtccccgca cggggatcga ggtctacatg gagcagctcc
     1561 tggcggcgct gggcagcacg ggccgggtcc agctgaccgc gctgagctgg gagccgctca
     1621 acctcgggct gcccggggtc agagaggtgc tacccactcg acgtcccaag cttcgccccg
     1681 gctcactgcc cgccacgctg tggaagctct ggttcgatca gtggcagtgt ctgagtgcac
     1741 tccctcgtac gggtgggatc ctctaccacg gcatggatgg gtttcttccg tactccctac
     1801 gccgccgcga tcgagcggtc gtcaccgtcc atgatctcgg ctggcaggcg catcccgagc
     1861 tgtatagtcg gcggctgcgg ctgatgtatg gcgggctgtt cccctgggtg gttcggcggg
     1921 ctgaccggtt cattgcggtg tcccgctaca ctgccgatga tctggtgcgg cgcgcggggg
     1981 tccctgcgtc gaaaatcgac gtggtatacc atgggttgga ccctgctttc accacggcag
     2041 gtgccggcag aagggtgtcg gactcgccct atgtgttggc cgtaggcggg gtctctcccc
     2101 gaaagaacac cagacgactc atcgcagcat tctctcgctg gagagcgcgg ggcggccacc
     2161 gatctcagca ccggctcttg atcaccggaa catcgttaga agccgatttc gagcagaacg
     2221 gatcagcctt gccggagggc gtggcgctgc tgggatatgt ggaccaggc
//
LOCUS       DASYRV010000185         6388 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_279070, whole genome shotgun sequence.
ACCESSION   DASYRV010000185 DASYRV010000000
VERSION     DASYRV010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6388
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_279070"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..636)
                     /locus_tag="VGQ24_04655"
     CDS             complement(<1..636)
                     /locus_tag="VGQ24_04655"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEV8454154.1"
                     /translation="MTRSGGTGSRLASLVLFLLLGCGERQSRCDDCGTVVVAATGEPA
                     SLIPPLVVETVGRDISDQIFERLAVLTPGAAPIDPAAYRPGLADKWERVDSLTWRFRL
                     RPAARWHDGTPVTADDVVFSFDAFSDSTFDAPARSYLAGRLRVTPEDSVTVRIAFSEP
                     SPEQLYDATYHVRIFPRHVWDTIPRQRWSGDTALGHLVGSGPYHIQAWQRGR"
     gene            complement(730..2346)
                     /locus_tag="VGQ24_04660"
     CDS             complement(730..2346)
                     /locus_tag="VGQ24_04660"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEV8454155.1"
                     /translation="MTSQQRSQSDVRPAQETGLGRAADLLRDARAHERAGCMAEAIQC
                     YGAAVSAAERQGERGILAESLRRLGVVHHLRDQPGIARELCQRSYQTATGMGDSVLAA
                     EALNALAGFDFEAGLIHEAREKFYQALELGVASAELRGRTEQNLGILANIQGALTEAL
                     AHYRQSLVAFQSCGDDRGCAIAYHNLGMVSSDRELWDDADRYFRQSLDIAQAIGDVHL
                     QGLGLLNHAEVHLARQRYDQARVNAEAALGIFDRLDSRLDKADAYKVIGRVYRETGRH
                     ALAEARLRAAVDMAVSTGSVLSEAEASRELALLYQAMTRNQEALRLLNAAHRLFSRLD
                     ARVDLVDVSTKVLKLEETYFAVVRDWGQSIESSDSYTFGHCERVAGYSVALARELGLD
                     EEQQTAIRIGAYLHDLGKVRVPHEILTKPTALTPDEFGVIQMHPIWGLELLATVEFPW
                     DIKPIIRWHHEKYDGSGYPDRLRGDEIPVSAQIICIVDVYDALTTTRSYRGAMSHPEA
                     LGKMQEVRGWWRPDVYQAFMRSVAKVSRAA"
     gene            complement(2351..2941)
                     /locus_tag="VGQ24_04665"
     CDS             complement(2351..2941)
                     /locus_tag="VGQ24_04665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454156.1"
                     /translation="MKWHRRFTTLALALALAAGLSCTTSDSTAPLAPSGEQQSPSFGL
                     IGDLTGGLTDITNDLTSTVVGTLGSVTDLLTCSAQPYAVTTQSIGPNGGMLRVGSHSL
                     QIPGNALSKTVVITAEQISGSTNSVRFSPEGLQFQKPATLTMNYENCALVLLQKKIVF
                     TTEKLKILEVLRSLDLFRSKSVTAPIDHFSRYAVAY"
     gene            complement(3359..3856)
                     /locus_tag="VGQ24_04670"
     CDS             complement(3359..3856)
                     /locus_tag="VGQ24_04670"
                     /inference="COORDINATES: protein motif:HMM:NF022317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2784 domain-containing protein"
                     /protein_id="HEV8454157.1"
                     /translation="MQSTCRQCTRFVGSGSGAAGQRGGNLPYQLLADLVVGLHVLFVL
                     FVVLGGLLVLRWPRLGYVHLPAAIWGAWIEFTGRMCPLTPLENSLRARAGEAGYSGGF
                     IEHYLLPLLYPSALTRTIQLVLGTLVIVVNLCIYGYLLRSRRSVRTTQPSPWNTKARK
                     HESTK"
     gene            complement(3783..4928)
                     /locus_tag="VGQ24_04675"
     CDS             complement(3783..4928)
                     /locus_tag="VGQ24_04675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454158.1"
                     /translation="MSDRFLVATRKGLFTIQRGSSRLSPWSITATAFLGDNVSMMLAD
                     PRDGTIWAALDHGHFGAKLHLSRDEGATWTEAASPAFPPRPEGQEEIEPAGGRPIPWT
                     VLRVWSLEAGGDDDPGGLWCGTIPGGLFRSDDGGTSWHLVRSLWDHPKRREWFGGGAE
                     FPGIHSICVEPRNSRRLTLGVSCGGVWVTEDQGVTWSCRAQGMRAAYMPPERQFDPYI
                     QDPHRVVRCPAEPRSLWASHHNGVFRSIDGAASWQEVTVPPSSFGFAVAVHPKKPETA
                     WFVPAQSDQRRIPCEGRVVVSRTQDGGTSFTELTRGLPQRHAYDLTYRHALDIDGSGE
                     CLALGTTIGSLWVSVDQGDSWQTVAEHLPPVYAVRWIGQRGGGAAGR"
     gene            complement(4986..5255)
                     /locus_tag="VGQ24_04680"
     CDS             complement(4986..5255)
                     /locus_tag="VGQ24_04680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HEV8454159.1"
                     /translation="MPTVTFTPNIQRHISCPATQVPGKTVRQVLDAVFEGNPRARGYV
                     LDDQGAVRAHMVVFVDGHQVHDRQHLSDPLRPDAEVYVAQALSGG"
     gene            complement(5384..>6388)
                     /gene="fusA"
                     /locus_tag="VGQ24_04685"
     CDS             complement(5384..>6388)
                     /gene="fusA"
                     /locus_tag="VGQ24_04685"
                     /inference="COORDINATES: protein motif:HMM:NF015706.4"
                     /note="EF-G; promotes GTP-dependent translocation of the
                     ribosome during translation; many organisms have multiple
                     copies of this gene; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEV8454160.1"
                     /translation="VERLSAGDIGSVAKLKDTHTGDTFCWREAPVRLPPIPFPDPVAT
                     SAVVVKQRGEEDKLAAGLHKLHEEDPTFHFEYNSELGQTLIHGMGERHFDTILNRLER
                     KFGVHAELARPRVAYRETIKGRAEGQGKHKKQSGGRGQYGDCWIRVSPLPRGAGYEFV
                     DDIVGGVIPGKYIPAVDRGVQEAAVRGVVAGYPLVDFKVECYDGSYHDVDSNEMSFKM
                     AGIMAFRNVTPKARPVLLEPLLDVEVWAPDDVLGDVMGDLSSRRGQILGTDTDGRLTR
                     VRAIVPEAELYKYSTTLHSITHGRGTHRQKFHGYAEAPPDVAARVAAENQKERELQTA
                     "
BASE COUNT         1161 a         2083 c         2037 g         1107 t
ORIGIN      
        1 acggccgcgc tgccaggcct gaatgtggta cggtccgctg ccgaccaggt gccccaaggc
       61 agtatctccc gaccagcgct ggcgcgggat agtgtcccag acgtggcggg ggaagatccg
      121 cacgtgatag gtcgcgtcat acaactgttc gggtgatggt tcgctgaagg cgatgcgaac
      181 ggtgacggaa tcttcgggcg tgacccggag ccggcccgcg aggtaggaac gcgcgggagc
      241 atcgaatgtg gagtcgctga acgcgtcgaa ggagaaaaca acatcgtccg ccgtcaccgg
      301 cgtgccgtca tgccagcggg cagccggccg cagccggaag cgccaggtga gcgagtcgac
      361 tcgctcccac ttatcggcca ggccgggccg gtaggcagcc ggatcgatcg gggcagcgcc
      421 cggggtcagg accgccaggc gctcgaagat ctggtcgctg atgtcgcggc cgacggtctc
      481 aaccacgagc ggggggatca ggctggccgg ctcgccggtg gcggccacca ccacggtacc
      541 acaatcatcg cagcgagact ggcgctctcc acagccaagg agcaggaaaa gcactaacga
      601 ggcaagcctg gacccggtgc cgccggagcg cgtcatcaca acctcttcag aatagagtgc
      661 cgaagctgtt ggcgatgcaa tttgccggga gaccaggtac ttgcggtagt gcggcaggct
      721 gcatgcagct cacgcggctc gggagacctt cgccacgctc cgcatgaacg cctggtagac
      781 gtccggacgc caccaccccc gaacctcctg catcttgccg agcgcctccg gatgggacat
      841 ggcgccccga tagctccggg tcgtcgttag tgcatcgtac acgtccacga tgcagatgat
      901 ctgtgcgctc acgggaatct cgtctccccg caggcggtcg ggataacccg aaccgtcgta
      961 cttctcgtgg tgccaccgga tgatgggttt tatgtcccag gggaattcga ccgtggccag
     1021 cagctccagc ccccagatgg ggtgcatctg gatgacgccg aattcgtccg gggtcagtgc
     1081 ggttggctta gtcagaatct cgtgggggac ccgtaccttg cccaggtcat gcaggtaggc
     1141 gccgatacgg atggcggtct gctgctcctc gtccagtccc agctcgcgag cgagcgcaac
     1201 ggaatagccg gccacccgct cgcaatgtcc aaaggtatag ctgtccgagg actcgattga
     1261 ctggccccag tcccgcacca ccgcgaagta ggtctcttcc agcttgagga ccttggtgga
     1321 gacatccacc aggtccaccc gggcatccag ccggctgaat agtcggtggg ccgcattgag
     1381 gagccgaagc gcctcctgat tgcgcgtcat ggcctggtac aggagagcca gctcccgaga
     1441 cgcctctgct tcgctcagga ccgagccggt gctcacagcc atgtccaccg cggcgcggag
     1501 ccgtgcttcc gccagcgcgt gccggccggt ttcccggtac actcgcccga tcaccttgta
     1561 ggcatcggct ttgtccagac gagagtcgag ccggtcgaag atcccgaggg cggcctcagc
     1621 gttgacacgc gcctggtcgt agcgttgccg ggcaagatgg acttcggcgt gattcaagag
     1681 acccaggccc tggagatgga catctccgat cgcctgggcg atgtcgaggc tctggcggaa
     1741 ataccggtcg gcgtcgtccc acagctcgcg gtccgagctc accatgccga ggttgtggta
     1801 ggcaatggca cagccacggt cgtccccgca gctctgaaac gccacaagcg actggcgata
     1861 gtgcgccagc gcctcggtca gggccccctg gatgtttgcc agaatcccga gattctgttc
     1921 ggtgcgtccc cgcagctcgg cgctggctac gcccagctcg agcgcctggt aaaacttctc
     1981 tcgcgcctca tggatgaggc cagcctcgaa gtcgaagccc gcaagcgcgt tcagtgcctc
     2041 cgcggcgagt accgagtcac ccataccggt ggcggtctga tagcttcgct ggcacaactc
     2101 gcgggcgatt ccgggctgat cacgcagatg gtgcaccacg cccagccggc gcagtgattc
     2161 ggccaggatg ccccgctcac cctggcgctc cgcggcagag acggccgccc catagcactg
     2221 tatggcctcc gccatgcagc cggcccgctc gtgggcccgg gcatcacgta acaaatccgc
     2281 cgcgcggccc agcccggtct cctgggccgg ccgcacgtcg gattgggatc gctgctggga
     2341 cgtcaccggg tcagtacgcc actgcgtacc gggagaagtg gtcgatcggt gccgtgacac
     2401 tcttgctgcg gaacaggtcc aaggaacgca ggacttcgag aatcttgagc ttctcagtgg
     2461 tgaacacgat tttcttctgc agcagcacca gcgcacagtt ctcgtagttc atcgtgagcg
     2521 tggcgggctt ctggaactgg aggccctcgg ggctgaaccg caccgaattc gtcgagccgg
     2581 aaatctgctc cgccgtgatc accactgttt tggagagtgc attccccggg atctgcagcg
     2641 aatggctccc tactctcagc ataccgccgt tgggaccgat gctctgcgtg gtaacggcgt
     2701 acggctgggc cgaacacgtg aggaggtccg tgacacttcc aagagtgcca accactgtac
     2761 ttgtcaggtc gttcgtgatg tcggtcaagc cgccggtgag atcgccgatg aggccgaagc
     2821 tcgggctctg ctgttcgccc gacggcgcga gcggagcggt cgagtcggac gtcgtgcagc
     2881 tcaacccggc ggccaatgcc aacgccaggg cgagcgtcgt aaacctgcgg tgccatttca
     2941 taagaccact ccgggcagag ggtgagcgac gtgcgacgat accgcgaccg ctgatcggcc
     3001 gccgaacgga gcgagcgcaa gccagcgcgg ccgggggcct ggccgctgac ttgcgttttt
     3061 cactcggttc ggttcgcgga acgtgaaacg tgacatgcgc ttagcttgca aagaccatgc
     3121 cccctgaaaa agcgggtgta tggaatttga tggctgcttg ctggtcagtt tgcagacaac
     3181 ccactgacta catcttggcg ggtggagagg gtgctcggat gtatggattc acaacgagtg
     3241 caacctctga gagctgcggc atcggtccgg cgaatgggta tttccgtggc ggtttgcagc
     3301 aacagcaatc acgaaaacac gaaagtagga aaacacggaa cttgcactcg tggttggttt
     3361 acttcgtgct ttcgtgtttt cgagctttcg tgttccatgg ggagggttgg gtagtccgta
     3421 ccgaacgtcg gcttcggagc aggtagccgt agatgcacag attgacgact atgacgagcg
     3481 taccgaggac tagctggatg gttcgcgtca gagcggaagg atagagcagc ggaagcaggt
     3541 agtgctcgat gaatccgcct gagtagccgg cctcgccggc tcgggcccgg agcgagttct
     3601 ccaacggcgt cagcggacac atccggccgg taaactcgat ccaggctccc cagatagccg
     3661 cgggcaggtg gacgtacccg agcctcggcc agcggagtac caggaggccc ccgagcacca
     3721 cgaacagcac aaagagcaca tgcaggccga cgacaaggtc ggcaagaagc tgatatggca
     3781 ggttaccgcc ccgctgcccc gccgccccgc tgcccgatcc aacgaaccgc gtacactggc
     3841 ggcaggtgct ctgcaactgt ctgccacgag tcgccctgat ccaccgacac ccagagagac
     3901 ccgatcgttg tgcccagcgc caggcactct ccgctcccgt cgatgtccag cgcatgtcga
     3961 taggtgaggt cataggcgtg acgctgcggt aggccgcgag tcagctcggt gaagctcgtg
     4021 ccgccatcct gtgtccggga aacgacgacc cggccctcgc agggaatcct gcgctgatca
     4081 ctctgggcgg gaacgaacca cgcggtctcc ggcttcttgg gatggaccgc cacggcaaac
     4141 ccgaagctcg atggcgggac cgtcacctcc tgccaactgg cggcgccatc gatgctgcga
     4201 aagacgccgt tgtgatgcga ggcccagaga gaccggggct cggcggggca gcgcaccacc
     4261 cgatgcggat cctggatgta gggatcgaac tgtcgctctg gcggcatgta tgcggcacgc
     4321 atgccctggg cccggcagct ccaggtgact ccctgatcct ccgtcaccca gaccccgccg
     4381 caggacactc ccagcgtcag ccggcgactg tttctcggct cgacacagat cgaatgtatt
     4441 ccggggaact cggctcctcc gccgaaccac tcccgccgct tcgggtgatc ccacagcgac
     4501 cgcaccagat gccaggaggt gcccccgtca tcggagcgga acagcccacc gggaatcgtt
     4561 ccgcaccaca gacctcccgg atcgtcgtca cccccggctt ccagcgacca cacccgaagc
     4621 acggtccagg ggatgggcct gccgccggcc ggttcgatct cctcttgtcc ctccggcctg
     4681 ggcggaaagg caggagacgc tgcctcggtc caggtcgccc cttcatccct cgacaggtgc
     4741 agcttggcac cgaagtggcc gtggtccagc gccgcccata tggtgccgtc acgcgggtcg
     4801 gccagcatca tcgaaacatt gtcaccgagg aacgccgtgg ccgtgatgga ccagggtgag
     4861 agccggctcg acccccgctg gatggtgaac aggcccttcc gggtcgcgac caggaatcga
     4921 tcactcacga ttcgcccagg tgttgagctg agggcaagaa caacagcagc agttgccttt
     4981 gactttcatc cgcccgagag cgcctgcgca acgtaaacct ccgcgtccgg ccggagggga
     5041 tcggagaggt gctggcggtc gtgcacctga tgcccatcca cgaacacgac catgtgcgca
     5101 cgtaccgccc cttggtcgtc gaggacgtac cctcgagccc gcgggtttcc ctcgaagacc
     5161 gcgtccagaa cctgccgcac cgttttgccc gggacctgcg tcgcggggca gctgatgtgg
     5221 cgctggatgt tgggggtgaa ggtgacagtg ggcatgtcaa taaaagcgta aacggtaaac
     5281 agtaaacagt aaacagtaaa cagtaaacgg gccgcgcccc tcaacccctg ttcaccgttc
     5341 accgtttacc gttcacgttt ttcggtttac cgccgtaccg ccctcacgcc gtctgcagtt
     5401 cccgctcctt ctggttctcc gccgccaccc gcgccgcgac gtccggcggg gcttccgcat
     5461 agccgtggaa cttctgccga tgggtgcctc ggccgtgggt gatcgagtgc agcgtggtgg
     5521 agtacttgta tagctccgcc tcgggcacga tggcccgaac ccgagtaagc cgaccgtcgg
     5581 tgtcggtgcc caggatctga ccgcgacggg agctgagatc gcccatgacg tcgccgagga
     5641 cgtcgtccgg cgcccagacc tcgacatcca ggagcggctc aagcaacacc gggcgggcct
     5701 tgggcgtcac gttccggaag gccatgattc ctgccatctt gaaggacatc tcgttcgagt
     5761 ccacgtcgtg gtacgatccg tcgtagcact cgaccttgaa gtccaccaag ggatacccgg
     5821 ccacgactcc gcgcaccgct gcctcctgca ctccgcggtc gacggccggg atgtacttgc
     5881 cgggaatcac gccgcccacg atatcgtcca caaactcgta accggcgccc cggggcaggg
     5941 gagagacccg gatccagcag tcgccgtact gcccgcgccc accggactgc ttcttgtgct
     6001 taccctgacc ctccgctcgt cccttgatgg tttcgcgata cgccacccga ggccgcgcca
     6061 gctccgcatg gacgccgaac ttccgctcga gtcgattgag aatggtgtcg aagtgccgct
     6121 cgcccatgcc atggatgagc gtctggccca gctcggagtt gtactcgaag tggaaggtcg
     6181 ggtcctcctc gtgcagcttg tggagcccgg ccgcaagctt gtcctcttca ccccgctgct
     6241 tcaccacgac ggccgacgtc gcgaccggat cggggaacgg gatcggcggt aatcgcaccg
     6301 gggcctcgcg ccagcagaag gtgtcgcccg tatgggtgtc cttgagcttg gccaccgagc
     6361 cgatgtcgcc ggcggacagc cgctccac
//
LOCUS       DASYRV010000186        15261 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3600832, whole genome shotgun sequence.
ACCESSION   DASYRV010000186 DASYRV010000000
VERSION     DASYRV010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 15261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15261
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3600832"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..964
                     /locus_tag="VGQ24_04690"
     CDS             <1..964
                     /locus_tag="VGQ24_04690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEV8454161.1"
                     /translation="RAAVPTPNQAEVDRENIAISYEVSPEFSVGVGRQNFVQDSSDSE
                     VPIRATGNTVFAAGRWRDIRLSAGLYDSRSQGTANLSSYFALGRQLAQWLDAEIFVLQ
                     SRPESQPVVTTPLANLRWRLSPRVGLSQQISFHDHRPTILFGASLITSIGEFGIDYQI
                     VHQPFKPLNPFRSALNLTARLQLGRYSTSLGTYVRPDGAVDYSASGSTFLYMGSFGGA
                     QPQQVGGRMSQYVIRGKVRDTAGNPVEGAALDFSGELVFTNSSGEFLLRVRRPSRYAL
                     TILPAEFLLPGVWEVLSAPDEVTASAEARAVPLEIILRHPETSP"
     gene            complement(1022..1459)
                     /locus_tag="VGQ24_04695"
     CDS             complement(1022..1459)
                     /locus_tag="VGQ24_04695"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEV8454162.1"
                     /translation="MVAGLVACGRSADRDSAPGKGGFSASLGVDTAAMTKTPSGLRYQ
                     EVTPGQGKEAAPGRAVSVHYTGWLPNGEKFDSSRDRDQPFGFTLGAGEVIAGWDEGVA
                     GMKVGGRRKLVIPPDLAYGTAGAPPDIPPGATLVFDVELLDVR"
     gene            complement(1524..1597)
                     /locus_tag="VGQ24_04700"
     tRNA            complement(1524..1597)
                     /locus_tag="VGQ24_04700"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1561..1563),aa:Pro,seq:ggg)
     gene            1813..1989
                     /locus_tag="VGQ24_04705"
     CDS             1813..1989
                     /locus_tag="VGQ24_04705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454163.1"
                     /translation="MGRQDGLPWDTGGDLPWETPDDGEQADSEAWRGDLHQDDWPESL
                     AGPEYWLYKKQRDE"
     gene            2259..3227
                     /locus_tag="VGQ24_04710"
     CDS             2259..3227
                     /locus_tag="VGQ24_04710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454164.1"
                     /translation="MMPNPNESSSQPKPWDPFQLMDRMDEEALRKELEGVANTDLVYV
                     VKEGGQEVVGLSKTGVDECCMALVSQGQVIREEDLHYELIGEGEDREALFKVKAARFA
                     VSPEGQDVRLDQVIGVKRQALYHEPAQLDLDTKVPSKKYRGKTYRELLSSGEGRDYLA
                     WMAENFNEPEIRDFVQRILAGEEIVGRRGRQLNPHWYEHGAMKAARNARFRLIPGNVR
                     AQVITTARISGKTRVVEAKASPVQPAVTAMPEVVGRAGPYAPTEKQVAFFQRLADSPV
                     FTDQERARALDWLATKATRQTIKDQIDWLKREVETRKTRPGRESAA"
     gene            complement(3337..4329)
                     /locus_tag="VGQ24_04715"
     CDS             complement(3337..4329)
                     /locus_tag="VGQ24_04715"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEV8454165.1"
                     /translation="MPTLRSRLAPSSSTSSAARGGPGTPSGSSPATPAHRVSGRLAGL
                     VWLTLCGIWGSTWLAIKLGLRDLPPITFAGIRFALAGAVLFAIIWLSGARLPRSRREW
                     ILLGYTGLLSITVNYALVFWGEQYISSGLAALLSATVPLFGLPLAHRYLQSEPLTLRK
                     GVGVVLGILGVAIVFSGELGIGGPVALWASVGIIIAALATAHAGVLVKAGGTHIEPSV
                     LAGVQMVGGCVPLLLVGFGLEGSPLHFHWTPLALACLAYLTIVGSVIAFLMYYWLIRH
                     TEVSGVLMIPLVTPLVAVLFGVLFAGEIVGWHTALGGMAIIGGVALTILRIGER"
     gene            complement(4517..4861)
                     /locus_tag="VGQ24_04720"
     CDS             complement(4517..4861)
                     /locus_tag="VGQ24_04720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454166.1"
                     /translation="MTLFGLSMIGFGISRDFLLSTVLLAVSGMADTVSVVVRSTLLQV
                     LTPDHLLGRVAAVNAIFIGSSNEIGAFESGTAAKLIGTVPSVVLGGFATLVVVAVTAV
                     KVPQLRRLREIR"
     gene            5334..6674
                     /locus_tag="VGQ24_04725"
     CDS             5334..6674
                     /locus_tag="VGQ24_04725"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEV8454167.1"
                     /translation="MVPAFDGEKITWDIDVRTFADHPRVQYYLNYFQGASRTGMTVFL
                     TRGARYEPMIRRVFEAEGLPGDLGYLALIESGYSNDAVSRSYAVGMWQFMKGTARGYG
                     LRVDTWVDERRDPVKATDAAARHLRHLRDRFGSLYLAAAAYNAGAGKVSRGLGKLEWV
                     APADTLMEPDTLIQTDVPDSASTAEDSTLESEPEADEADAVLDNSDITSDAAFFRLAG
                     TDMLAAETQDYVPKLIAAAVVAKQPERFGIEAPVAAPFGYDSIVVTSATGLDIVARLA
                     EVSAAEIRELNPQYLRFATPPRSTSVIRLPSGTGPEVAAGYAKLSPKARVHFMSHVVR
                     RGERLIRIAARYHLPVSDIRAANPKIRGSRLKAGSRLTIPIVAIPSALAIRAVSGPAF
                     GLHTARIATHRVRSGETLIGIARRYRVSLRALRRVNALSAEYTLRAGKRLRIPS"
     gene            6710..6922
                     /locus_tag="VGQ24_04730"
     CDS             6710..6922
                     /locus_tag="VGQ24_04730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454168.1"
                     /translation="MSAEPSAVLATPVAQNQATDFGRAAMAILAAMVFLIVALTGILV
                     ETTWRNPAGDVEVLPPSADPGSFARR"
     gene            7054..7998
                     /locus_tag="VGQ24_04735"
     CDS             7054..7998
                     /locus_tag="VGQ24_04735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454169.1"
                     /translation="MRTKSTESATHSRGSRLAADAVIPGYLSARGLPPVRGRFTVTDS
                     GLVFSSAEGTVTRFPLVGPVRQTGGRQWRPTTVSLAYVEEGSENRPIYIFRIDAGVFE
                     TDTPGALLDVAAHPEWLDSLGPTQWTVEQTLVNGADSTAVWGTAREIASSTFADSLYA
                     LFGRPRAPVGLIGRRGRMAGRLGEYIAARDSLALDPGRMNGKAQLRHAMAHELGHRWQ
                     ARAPGQVAMLWQGVTPIRDPKRYGYGDESEHQAEAIAFAINFLETTAAAQDSVSTALT
                     LLDHYELLVPGTRTMVRYLSLQPLYRNHPLCSLLTTGR"
     gene            complement(8061..9263)
                     /locus_tag="VGQ24_04740"
     CDS             complement(8061..9263)
                     /locus_tag="VGQ24_04740"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-[acyl-carrier-protein] synthase
                     family protein"
                     /protein_id="HEV8454170.1"
                     /translation="MTGRAVWVTGLGAVSAAGLGAAALGEMLIEGRTGVRSLPELDCV
                     PVGQAVTPPRHRASRHLDRSARFFLAAGEEAWHNAGLDDCSLDFKRCAVLEGSSLGPL
                     ADLLTEHNEQLARSSADAARPSRLVRYMSGAGGASLAQLHGMRGPVLHLSAGSVSAAC
                     AIGEAFQKISLGLLDVVVAGGAECPLHPEIIATFRSAGILSEPDAGGSACRPFDRRRN
                     GTVLGEGAGVLVLEAAEHARRRGARARAVVAGFGISSEAYSMTSPDPTGSGVVDAVRD
                     ALGAMDPGEIGWIKTHGTGTRLNDAAECRGLAAIYGESLPATPLTSFKPAVGHCLGAS
                     AGVETVGAITALERRLVPPTLGSEAVDPELPPYTVAQVTSNSDKATALVLAESFGGRC
                     TALVLTTL"
     gene            complement(9260..10831)
                     /locus_tag="VGQ24_04745"
     CDS             complement(9260..10831)
                     /locus_tag="VGQ24_04745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454171.1"
                     /translation="MRRAYALLGRITLLAALGLHNGACMSWKTQPVSPDHIVAQDPDQ
                     VRVTLGNGSKVVVARPAIIGDSLIGAPTGANPKRSAQRLAIPLSDIQSVEVQRVNAGK
                     TALLVAGLGVTAMVVIAAANCCGPDFKPAPPSGGSGGGSGDGYPGYSCPLVYSWDGTH
                     WRLDSGTFGGAIAPALARTDVDNLMYAIAQNGVLRLRVANELNETDYLDALSVLAVDH
                     APGLTVAPGGDGRIYALGKLAPPLSARDDRGGDALPRVRAPDGWGWESNPSGRDTSRV
                     ADIRDGIELAFPKPATNQARLVVDGNNTPWAAHLTQELVAAHGRETRAWYDSLGTYPA
                     MARGLGEMLQREAFLGVSIWSRGKWEHQGYIWEAGPEIVKRQVFPLDLSGVASDTVRI
                     RLESAPSFWLIDHVALGAAESGPFEVRELRAESAMDRSGADVAPQISSLDGRHYVMEN
                     GVSAELRFRVPDVPAGRARSYLVRSSGWYRIHAPEIEPADVALLRQVLTEPQGASRVA
                     VGRMNDALLALGGRP"
     gene            complement(11044..12957)
                     /locus_tag="VGQ24_04750"
     CDS             complement(11044..12957)
                     /locus_tag="VGQ24_04750"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEV8454172.1"
                     /translation="MISCHTLGPVGLSFDGGPAPPELLWRKHLALLVYLARSPRGRSR
                     EHLLGLLWPEKPEAAARHSLNEATRVLRRYLSDSSVDTTGGQVRLTAEAVRLDVDRLE
                     ELARAGDWSSAARLITGEFLEGFAIPGASAFEDWLAGERSIIRHRSIEVLIHHAEDLL
                     QSGKAAEASGIAMRALALEPRSEPALRVAMRSLVLAGDRSAALDRYEAFRTRLKEEMG
                     SSPDAATEALAARIRHERSPRPATIGRGRDPADEPRPPLVGREVELTRLVDAAASASR
                     ERRAAALILQGDSGIGKTRLAEELLARLRLDGITVAAMRAVEADREEEWSGVLALARG
                     GLLQAPGVAAASPGALSVFADVIPEWADRFPGGRRETEAVSYGRALSDVLRAATDEQP
                     LALAVDDAQWLDQPSMLALLAALRDLAAAPLILLLSADLQPPRSELDELRTRLGRDVR
                     GTALRLSPLHSANLRALARHMLPQFNEVEIERVVRRVATDSAGLPLLAVELLRAVALG
                     LDLRGTPGAWPEPLKTLDQTLPGDLPDTVSAAIRVGFRRLSPAAQRALSVAAVLGDRV
                     PLERLAHALDLELSEVAGALDELEWHRWLVCDSRGYTFVARVVQQVVARDMLTPGQRQ
                     RIQALGHSFTSPL"
     gene            complement(12954..>15261)
                     /locus_tag="VGQ24_04755"
     CDS             complement(12954..>15261)
                     /locus_tag="VGQ24_04755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454173.1"
                     /translation="GGEVSSRSDLYALGMVVYEALTGRRWRSGATVTLARWWRVPRWL
                     RGVLRRALAPAPGERWSDAAAFRDALDTAEGQRKAGRGWVYAAAVLVLVVLYAMTREG
                     VNSEGPGTPPRQMAILPFESEGGPADDSVAAGLAHLVQLNLDNLPGLSMTPPRQVKRW
                     WDGHGGSLIGVEKANAARELRVHWLAYGLLEHRSDSLRIRLTVYDSAGRKMPIPEVRA
                     RASDLAALGDTLAVSLVRAIAPHLAESYRVVGDVGRVSLGALREFLRGEAAFQQDAWS
                     LAERHFESALDLDSTFALAAWRLANVKRWRRLPYDDDLRKLYDRQDARLRPLDRELIE
                     ALSDSSIRVRLARMDTVIARFPDDAYARLLLAEELFHRGPLVGRGLDEGARAMADAVA
                     RDSSLALAYDHLVFAAIRQGRRADARNAIRYRWRVGTSRSYGDPDVLPLARLAYDERF
                     VPWRARLKRRYLGWTADSAQLEGIGRVFRTGVAWSDIPESQVALSELLLSSVESDSAT
                     QASAHEGKAIGLMGLGRPRQALAQADSAAAMFGSEAARLEQAEWRVVLRALGLPISDA
                     GEWRAGLAALAGDSVLGHRAAWALGLAAYARGDTTEGHSWRDQLRGGGSQGQSLERFL
                     TAIALAGQSQWQAALALSDSLEIAFNASDPPDPFARAAFHLHRGAWLAAAGDTRGADR
                     EWLWSEGSDIEGWPQGPAQAGEIDGMLGVYARLRRGQVLLRPDAGASERTRGCAYLKR
                     VMELWSGAEPAFSALKARADSLLRRCAP"
BASE COUNT         2733 a         5163 c         4990 g         2375 t
ORIGIN      
        1 gcgagccgcc gtaccgacgc cgaaccaggc cgaagtcgat cgagagaaca tcgcgatctc
       61 gtacgaggtg agtccggagt tttcggtggg ggtgggccgg cagaacttcg tgcaggactc
      121 cagcgattcg gaagtcccga ttcgcgccac cggcaacacc gtgtttgcgg cagggcgttg
      181 gcgggacatc cggctctcag ccgggctgta cgactcccgc tctcagggga ccgccaacct
      241 gagctcgtac tttgcgcttg gacgacagct ggctcagtgg ctcgacgcgg agatctttgt
      301 tctccagagc cggccggaga gccagccggt ggtgaccact ccgctggcga acttgcggtg
      361 gcgtctgtct ccgcgagtgg ggctcagtca acaaatctcc tttcatgacc accgccctac
      421 catactgttc ggcgccagtc tgatcacctc catcggtgag ttcggaatcg actatcagat
      481 cgtgcaccag ccgttcaagc cattgaaccc gttccggagt gcgttgaacc tgacggccag
      541 acttcagctc ggccgctact cgacaagcct gggaacctac gtgcggccgg acggcgcagt
      601 cgattactcg gcctcgggaa gcaccttcct gtacatgggc tcctttggtg gcgcacagcc
      661 gcagcaagtc ggcgggcgga tgtcgcagta cgtgattcgt ggcaaggttc gggacacagc
      721 ggggaacccc gtcgaaggag cggccctcga cttcagcggt gagttggtct tcaccaactc
      781 gagcggtgag ttcctgctgc gggtgaggcg gccgagccgg tatgcgctga ccattctccc
      841 cgccgagttc ctgctgccgg gggtatggga agtcctgagc gcgccggacg aggtcaccgc
      901 gtcggcagaa gcccgggctg tacctctcga gatcatcctc cgccacccgg aaaccagtcc
      961 ctaaagaaac aaaaggcgcc cgcgagtcgg gcgccttggg ctcagtgtct cggccacccg
     1021 gtcagcgcac gtccagcagc tcgacgtcga agaccagcgt ggctccgggt gggatgtcgg
     1081 gtggcgcccc ggcagtgccg taggcgaggt ccggcggaat cacgagcttc cggcggccac
     1141 cgaccttcat gccggctacg ccctcgtccc atccagcgat cacctcgccg gcgccgaggg
     1201 tgaagccgaa cggctgatcg cggtcgcggc tgctatcgaa cttctccccg ttgggcagcc
     1261 agccggtgta atgcaccgag accgcgcgtc ccggcgctgc ctctttgcct tgcccgggag
     1321 tcacctcctg gtagcggagg cctgacggag tcttggtcat ggcggcggta tccacgccga
     1381 gcgaggcact gaagccgcct ttcccgggtg cgctgtcgcg gtcagccgag cggccacagg
     1441 cgacgaggcc ggcaaccatc acgatgatca ggcgattcag attgactccg aacgatgagc
     1501 gacaaaagga cggccccacc gagtcgggac ggcgggattt gaacccgcga cccctgcaac
     1561 cccattgcag tgcgctaccg gactgcgcta cgtcccgaaa ccagcgaggc ggaattgtag
     1621 cccccctgcc aagcggtggg aagggtgatc cgccttcgcg cgggcgacct tgtgccagtt
     1681 tgtgggcccc ctgacccggg cgggcccgcg acttgcgacc ctggtctcaa ggggctgaaa
     1741 cagtgtcccc ggacagggca tttcgtggat tggtgccgca tggtgcggcg ccacgtcgca
     1801 acggagggcc tcatgggccg acaggatgga ctgccatggg acacgggggg agatctcccg
     1861 tgggagacgc cggacgatgg ggaacaggcc gattcagagg cctggagagg agatctccac
     1921 caggatgatt ggccggaaag cctggccggt cccgagtact ggctctataa gaagcagcgc
     1981 gatgaatgat gcgatttggg ctatacccgc ctaaaggggc cgagttcttg tcggccccct
     2041 tttccttccc ccgaagaagc cccgtaggcc gcctcgtaag ctcttgcctc taagtggctt
     2101 aggcactgtt gacatcgact aagtcattgt tatttttcga cttgcgtctg gtgagatggg
     2161 gcaagacccc ggaatgccag gggagtacgg accacgagga cgggcccggc aggccgtccc
     2221 tttccatata tggatgggag aggaagcaga tgtcggaaat gatgccgaac ccgaacgaga
     2281 gctcgagtca gcccaagcca tgggatccgt ttcagctcat ggatcgcatg gatgaagaag
     2341 cgttgcggaa agagctggag ggagtcgcca acaccgatct ggtctatgtc gtcaaggaag
     2401 gaggacagga ggtcgtcggg ctctcgaaga ctggagtcga tgagtgctgc atggctctgg
     2461 tgtcgcaggg tcaagtcatc cgcgaggaag acctccacta cgagctgatc ggtgagggcg
     2521 aagatcgcga agccctcttc aaggtcaagg ctgcgcgctt cgccgtgtca cctgaggggc
     2581 aggacgtgcg actcgaccag gtgatcgggg tcaagcggca ggcgctctac cacgagccgg
     2641 cccagctcga tctcgatacg aaggtgccga gcaagaaata ccggggcaag acataccgcg
     2701 agctcctgag cagcggcgaa gggcgagatt atctggcctg gatggccgag aatttcaatg
     2761 agccggagat ccgggacttc gtgcaacgca ttctggcagg cgaggagatc gtgggccggc
     2821 gaggccggca gctcaacccg cactggtacg agcacggggc catgaaggcg gcacggaacg
     2881 cccggttccg gctcattccg ggcaacgtac gggcacaggt gatcacgacc gcccgcatat
     2941 cggggaagac ccgcgtggtc gaagcaaagg cttccccggt tcagcccgcg gtcaccgcga
     3001 tgccggaggt cgtggggcgc gcgggaccgt acgccccaac cgagaagcag gtggccttct
     3061 tccagcgcct agccgactcg ccggtattca ccgaccagga gcgcgcccga gcgctcgact
     3121 ggttggccac caaggccacc cgccagacga tcaaggacca gatcgattgg ctcaagcgcg
     3181 aggtagagac tcggaagacg cggccgggac gggagtcagc cgcgtagctt ggcaacagca
     3241 acaacaaaca cgaaagcacg aaagcacgaa aggcgcccag ccaattaagg agtccttttc
     3301 gtttttcgtg ttttcgtgat tgtcctttgc tcttgtttaa cgttctccga ttctcagtat
     3361 ggtcagggcg acaccgccga tgattgccat tccaccgagc gcggtgtgcc acccaacgat
     3421 ctccccggca aacaaaaccc cgaacagcac cgccaccaac ggcgtgacca acgggatcat
     3481 cagcaccccg ctcacctcgg tgtggcggat gagccagtaa tacatcagaa atgcgatcac
     3541 cgaccccacg atggtgaggt aggcaagaca ggccagcgcg agcggggtcc agtggaaatg
     3601 gagcgggctc ccctccagtc caaacccgac gaggaggagg gggacacacc caccgaccat
     3661 ctgcaccccg gcgagcacgg agggctcgat gtgggtgccg cccgccttca ccagcacgcc
     3721 cgcgtgggct gtcgcgagcg cggcaatgat gatcccgacg ctggcccaga gcgcgacagg
     3781 cccaccaatg ccgagctcgc cggagaagac aatggcgacg ccgagaatgc ccagcactac
     3841 gcccactccc ttccggaggg taaggggctc gctctggaga taacggtggg caaggggtag
     3901 gccgaagagc ggcaccgtgg cgctcaggag tgcagccagt cccgatgaga tgtactgctc
     3961 cccccagaag acgagggcat agttcaccgt gatgctgagc aggccagtgt acccgagcag
     4021 gatccattcg cgccgggacc ggggaaggcg cgcaccgctg agccagatga tggcgaacag
     4081 caccgcaccc gcgagggcga accggatccc ggcaaaagtg atcggcggaa ggtcgcggag
     4141 gccgagcttg atggccagcc aggttgagcc ccagatacca cagagggtga gccacaccaa
     4201 cccggcgagc cgcccactga ctcgatgggc aggcgtcgca gggctcgagc ccgatggcgt
     4261 acccgggcca ccgcgggccg cggatgatgt actgctcgag ggcgcgagac gggaacgcag
     4321 tgtgggcact gtgactccgg acggacaaag agaatttcct tgcatggaat atccatgggg
     4381 ctgccccacc ccggccagcg gagctgagcc gagcccctcc ggcttcgagt gtctgacttc
     4441 ccctcagcac caccccttac actcagcctc cggggctcag ctcagttacg ctggcctccc
     4501 ccacccccat tcgatgctaa cgaatctcgc gcaggcgtct cagctgcggc actttcaccg
     4561 ccgtgaccgc cacgacgacg agcgtggcga acccgccgag cacgaccgag ggtaccgtgc
     4621 cgatcagctt ggccgcagtc cccgattcga aggcaccgat ctcgttcgag ctgccgatga
     4681 agatcgcgtt gacggcggcg acccgtccca gcagatggtc gggggttagg acctgaagca
     4741 gcgtggatcg caccacgacg ctgacggtgt cggccatccc gctcacggcc agcagcacgg
     4801 tcgagagcag gaagtcgcgt gagatgccga agccgatcat ggagaggcca aagagggtca
     4861 cactgaccag tagcgtccgg ccagcccgcc gaagcggggg ggccggtgag ccatcggcgg
     4921 cggaaggtaa ccgcggcaat tgcgggctgc taatgccacg cgctgcgttt tgccgcgagc
     4981 gcttgatttt tgccggagcg cgagtgcagt cctcccggca atcgggaacc taagtgcttg
     5041 tcatccaaca catcgcgcat cttgcgcagc gcggcccgct ttgtgcgaat cgggaagcgg
     5101 actcctattc acttttccgc actcaatccc tggcaggcat gaagcggctg atcctctgga
     5161 ccaacctcct ggcccttgcc gcgtgttcac gcgcaattcc gccagcccca aatggtatag
     5221 caccagtctc ggcgattccg ggtatccggg tttcacagcc ttccactccc caaccggagg
     5281 cgaccgcgga cgcagccgtc aatgatcttg ccgatgccgc ccccgattcg cggatggtac
     5341 cggcgttcga cggcgagaaa atcacctggg acatcgatgt acgcaccttc gccgaccacc
     5401 cccgggtcca gtactacctc aactacttcc agggcgcgtc ccgcaccggc atgacggtct
     5461 tcctgacccg gggggcgcgg tacgagccga tgatccgccg ggtcttcgag gcagagggct
     5521 tgccgggaga cttgggctac ctcgcgttga tcgagagcgg ttattcgaac gatgcggtca
     5581 gccggtccta cgccgtcggc atgtggcagt tcatgaaggg caccgcgcgg ggttatgggc
     5641 tcagggtcga cacctgggtt gatgagcgtc gcgatccggt gaaggccacc gatgcggcgg
     5701 cccggcacct acgtcatctg cgggaccgat tcggctcgct gtatctcgcg gctgccgcct
     5761 acaacgcagg tgccggcaag gtgtcgcgtg gtctgggcaa gctcgagtgg gttgccccgg
     5821 cagataccct gatggagccc gacactctga ttcagaccga tgtacccgac tctgcctcga
     5881 ccgccgagga ctctacgctc gagagcgagc ccgaggcgga tgaggcggat gcggtgttag
     5941 acaacagcga catcaccagc gacgcggcgt tcttccgact ggcgggaacc gatatgctgg
     6001 cggccgagac ccaggactac gtccccaagc tgatcgccgc ggcggtagtg gccaagcaac
     6061 ccgagcgatt cggcatcgag gcaccggtgg ctgctccctt cggctacgac tcgatcgtgg
     6121 tcacctcagc cactgggctc gacatagtgg cacgattggc cgaagtgagc gcggccgaga
     6181 tccgggagct caacccccag tatctccggt tcgccacccc tccccgctct acctccgtca
     6241 tccggctgcc atccggaact ggaccagaag tggctgccgg ttacgcgaag ctgtctccca
     6301 aggcccgggt gcacttcatg agtcacgtgg tgcgccgggg ggaacggctc atccggattg
     6361 cggcccgtta ccacttgccc gtgagcgaca tccgcgcagc gaatccgaag atccgaggct
     6421 cccgtctgaa ggccggctcg cggctgacca ttccgattgt cgcgatcccg tcggcgctgg
     6481 ccatccgtgc cgtcagcggg cccgcgttcg gactgcacac ggcacggatt gccacccatc
     6541 gcgtgcgctc gggtgagacc ctgatcggga tcgctcgacg gtaccgcgtc tcactgcgcg
     6601 ccttgcgtcg cgtcaacgcc ctgtccgccg agtacacgct gcgtgccggg aagcggctgc
     6661 ggatccccag ctaatgcaac cttcaacctc agccagcgga aagaacaccg tgtctgccga
     6721 acccagcgca gtccttgcca ctccagtcgc tcagaatcag gccaccgatt tcggccgggc
     6781 cgcaatggca atcctcgccg ccatggtgtt cctgatcgtg gcgctcacgg gcatcctggt
     6841 cgagaccacg tggcgcaatc cggccggcga cgtcgaggtt ctgccgccat cggccgatcc
     6901 agggagcttc gcgcggcgtt gaagccgagc gccacgtcca gccgcaactc ggttgccgca
     6961 gcgctcctgg ccgcggcgac cgccgtaatc ggttccccgg gtccatggac agagggatac
     7021 gccccggcag ggggtgcggt ctcgctggac accttgcgca ctaaatcgac ggagtctgcc
     7081 acccactcgc gcggctcccg cctggctgcc gacgctgtca tcccgggcta tctctcggct
     7141 cgtggccttc ccccggtacg gggccggttt accgtcacgg atagcggact ggtgttcagc
     7201 tcggcggaag gcacggtcac gaggtttccc ctggtcggcc ccgtccggca gactgggggg
     7261 cgccagtggc gcccgaccac cgtctcgctt gcgtatgtgg aagagggcag cgaaaaccgc
     7321 ccgatctaca tctttcgcat cgatgccggc gtgtttgaga ccgacactcc gggcgccttg
     7381 ctcgatgttg cggcgcaccc ggaatggctt gatagtctgg gccctaccca gtggacggta
     7441 gagcagaccc tggtgaacgg cgccgactcg actgccgtat ggggcacggc gcgggagatc
     7501 gcgagcagca cctttgccga ctcgctctac gcgctgtttg gccggccccg cgccccagtc
     7561 ggcttgatcg ggcgtcgcgg tcgcatggct gggcgcctgg gtgagtacat cgccgcgcga
     7621 gactcgctcg ccctcgaccc gggacggatg aatggcaagg cacagcttcg ccacgccatg
     7681 gctcatgagc tgggacaccg gtggcaagct cgggcgccgg gccaggtggc gatgctatgg
     7741 cagggagtaa cgccgatccg ggacccaaag cgctacggct acggcgatga gtcggagcac
     7801 caggccgagg cgatcgcctt cgccatcaac ttcctcgaga ccaccgcggc cgcccaggac
     7861 tcggtgagca ccgcgctgac attactcgac cactacgagc tcctcgttcc cgggacccgg
     7921 acgatggtcc ggtacctctc gctccagccg ctctaccgga atcacccact ctgctcgctg
     7981 ctgaccacag gacggtaagg ggcctcctcg agccacacag gaaggccccc gcgcaacact
     8041 gccttcagcc atatcatctt tcaaagcgtg gtaagaacca gtgcggtgca cctgccgccg
     8101 aaactctcgg ccagcacgag cgccgtggcc ttatcgctat tcgacgtgac ctgtgcgaca
     8161 gtgtagggcg ggagctcggg atcaaccgct tcgctcccga gggtaggagg aaccagccgc
     8221 cgttcgagag ccgtaatggc cccaacggtc tctaccccgg cgcttgctcc gagacagtga
     8281 cctaccgccg gcttgaacga ggtaagggga gtggcgggga ggctctcccc atatatcgcg
     8341 gccagtccac ggcactcggc agcatcgttg agccgggtgc cggtgccatg ggttttgatc
     8401 catccgatct cacccggatc catggcgccg agcgcatccc tcacggcgtc gaccacgccg
     8461 gaccccgtgg ggtcgggcga ggtcatgctg taggcctcgc tgctgatgcc gaagccggcg
     8521 acgacggcac gagcccttgc gcctcgacga cgggcatgct cagcggcctc aaggaccagg
     8581 acgcccgctc cttcacccag aacggttccg ttgcgccgcc gatcaaacgg gcgacacgcg
     8641 cttcctccag catccggctc gctgagaatc cccgccgacc ggaaggtcgc aataatctcg
     8701 ggatgcagtg gacactcggc gcccccggcg accaccacgt cgagtagacc aagcgagatt
     8761 ttctggaatg cctcgccgat cgcgcaggca gccgacacgc tgccagcgga caggtggagc
     8821 acgggtccac gcatcccgtg aagttgggcg aggctggccc cacctgcccc actcatgtac
     8881 cgcaccagcc ggctcggacg cgcagcatcc gcagacgacc gcgccagctg ctcgttgtgc
     8941 tctgtgagca gatctgcaag gggcccgagt gacgagccct cgagcacggc gcaccgcttg
     9001 aagtcgagac tgcaatcgtc gaggccggcg ttgtgccacg cttcctcccc ggctgcgagg
     9061 aagaaccggg cgctgcgatc caggtgccga gaggccctgt ggcgaggcgg cgtcaccgcc
     9121 tggccgacag ggacacaatc aagctccggg agcgagcgca ctccggtccg gccctcgatc
     9181 aacatctcgc cgagtgcggc ggcgcccaga cccgcggcgc tcaccgcacc gagccccgtg
     9241 acccacaccg cgcgcccggt catggcctgc cgcccagtgc cagtaaggcg tcgttcatcc
     9301 ggcccacggc cacccgtgag gcgccctgcg gctcggtgag cacctggcgg agcagcgcta
     9361 catcggcagg ttcgatctca ggcgcgtgga tgcgatacca accgctggag cggaccagat
     9421 aggatcgggc gcggccggcg ggtacatccg gcacccggaa acgcagctcc gcggatacac
     9481 cgttctccat cacgtagtgc cggccgtcca gcgagctgat ctgcggagcg acgtcggctc
     9541 cgctccgatc catcgcgctc tcggcccgca gctcacgcac ctcgaagggg ccgctctccg
     9601 cagcaccgag cgcgacgtga tcgattagcc agaacgacgg agctgattcg agccggatgc
     9661 ggacggtgtc gctcgcgacc ccggataaat ccagcgggaa cacctggcgc ttcacgatct
     9721 ccggccccgc ttcccagata tacccctggt gttcccattt gccgcgggac catatcgaga
     9781 ctccgaggaa tgcctcgcgc tgcagcattt ccccgaggcc gcgagccatc gctgggtagg
     9841 tgccgagcga gtcataccag gctctggtct cccggccatg tgcggccacg agctcctgcg
     9901 tcaggtgagc ggcccacggc gtgttattgc cgtcgaccac caggcgggct tggttggttg
     9961 cgggcttcgg gaaggccagc tcgataccgt cacgaatgtc ggcaaccctc gaggtatcgc
    10021 ggcccgaggg gttcgactcc cagccccacc catccggcgc ccgcactctc ggcagcgcgt
    10081 cgcctccacg atcgtcccgc gcactgagtg ggggcgcgag cttgccgagg gcataaatcc
    10141 gtccgtcacc acctggggcc accgtgagcc cgggcgcatg atccacggcc agcaccgaca
    10201 gcgcgtccag gtagtcggtc tcgttcagct cgttggcgac gcgcagccgg agtaccccgt
    10261 tctgagctat cgcatacatg agattgtcca cgtcggtgcg cgcgagcgcc ggggcgatgg
    10321 ccccgccgaa ggtgcccgag tccagccgcc agtgggttcc atcccagctg tataccagag
    10381 ggcaagagta cccggggtac ccgtcgccag agccaccgcc agagccaccg cttggcggag
    10441 cgggcttgaa gtcggggcca cagcagtttg ccgcggcgat caccaccatg gcggtgactc
    10501 ccagacccgc cacgagcagc gctgtcttac cggcattcac ccgttgcact tcgacggact
    10561 gaatgtccga gagaggtatc gcaagccgct gggcgctgcg cttgggattg gctcccgtcg
    10621 gcgcgccgat gaggctgtca ccgatgatcg ctgggcgtgc gacgacgacc ttgctgccat
    10681 tcccgagcgt gacgcgtacc tggtcggggt cctgggccac gatgtgatcg ggcgaaaccg
    10741 gttgagtctt ccagctcatg caggccccgt tatgaaggcc aagggctgca agcagggtga
    10801 ttcgtcccag gagagcatac gcgcgacgca tggcagacct ccacaccggc tgggtgagcc
    10861 cgcggcctgc tgccgcgagc gagtatcaac gccaggaagt gtgaggtcag gcggtaaagc
    10921 gggagtcaag aaccgcagcc ggaaggtctg ggttcgaatt gggtggggga gccagggtgg
    10981 ggtggccgca ggttcgcccc accgcaccgc gcagccgggt tgctgagttc gacctgacgg
    11041 cgcctacaga ggagaggtga agctgtgccc gagagcctgg atgcgttgcc gctggcccgg
    11101 cgtcaacatg tctcgggcca cgacctgctg gacgacgcgc gccacaaagg tgtagccgcg
    11161 tgagtcgcag accaaccagc ggtgccactc cagctcgtcg agcgcgccgg cgacttcgga
    11221 cagctcgagg tcgagcgcgt gggcgagtcg ttccagcggc actcgatcgc ccagcaccgc
    11281 ggctacggac aatgcgcgct gagctgccgg gctcagccgg cgaaatccca cccgaatcgc
    11341 cgcgctgacc gtatcgggaa ggtcgccggg caacgtctgg tccagcgtct tgagcggctc
    11401 gggccacgca ccgggcgtgc cgcgcaggtc gaggccgagt gccacagcgc ggagcagctc
    11461 tactgcaagc agggggaggc cggccgaatc cgtggcaaca cggcgcacca cccgctcgat
    11521 ctcgacctca ttgaattgcg gcagcatatg tctggccagg gcacgaagat tggccgagtg
    11581 gagcggactg aggcggagcg cggtgccacg gacgtcccgg ccaagccgag tgcgaagctc
    11641 atccagttca ctgcgtgggg gctggagatc ggctgagagg agcaggatga gcggtgccgc
    11701 cgcgaggtca cgcaacgcgg ccagcagggc aagcatggag ggctgatcca gccactgcgc
    11761 atcgtccacc gcgagcgcca ggggttgctc gtcagtcgca gcgcggagca cgtcgctcaa
    11821 ggcgcgaccg tacgagaccg cttcggtctc acgccggcca cccggaaagc gatcggccca
    11881 ttccggaata acgtctgcga ataccgagag cgcgcctggt gatgcggcgg ccacgccggg
    11941 cgcctgaagc agcccgcccc gcgccagtgc gagcacgccg ctccactcct cctcacggtc
    12001 ggcctcgacc gcccgcatgg ctgcgacggt tattccatcg aggcgcaggc gtgcgagcag
    12061 ctcctcggcc aatcgcgtct tgccgattcc gctgtcaccc tgaaggatca acgccgctgc
    12121 ccgccgctcc cggctcgcgg acgccgcggc atcgaccaag cgggtgagct ccacctctcg
    12181 gcccaccaat ggcgggcggg gctcgtcggc gggatctctg cctctcccga tggtagctgg
    12241 ccggggagac cgctcatgcc ggatccgggc cgccagtgcc tcggttgcgg cgtcgggcga
    12301 ggatcccatc tcctccttca ggcgggtgcg gaacgcctcg taacgatcga gtgccgcgga
    12361 gcggtctccc gcgagcacca ggctccgcat ggccacccgg agcgcgggct cggacctcgg
    12421 ctcgagtgcg agcgcgcgca tggcgatgcc cgaggcttcg gcggccttgc cgctctgcag
    12481 caggtcctcc gcgtgatgaa tgagaacctc gatcgagcga tgacgaatga tggatcgttc
    12541 cccggccagc cagtcttcga aggctgaggc gccgggtatc gcgaaaccct ccaggaactc
    12601 gcccgtgatc aagcgggcag cggacgacca gtcaccggcc ctggccagct cctccagccg
    12661 gtccacatcg agacgcaccg cctcagcggt gagccgtacc tgcccaccag tcgtatccac
    12721 actcgagtcg ctcaggtacc gccgaagcac gcgagtggcc tcgttgagcg agtgacgcgc
    12781 cgccgcctcg ggtttctccg gccagagcaa gccgagcagg tgctcgcgac tacgtccccg
    12841 aggagaacgc gcgaggtaaa ccaggagcgc gagatgcttc cgccacagca gctcgggtgg
    12901 tgcaggccca ccgtcgaagc tcaaccccac gggaccgagc gtgtggcagg agatcatggc
    12961 gcacaccttc ggagcagcga atccgcccga gccttcaggg cgctgaacgc cggttccgcc
    13021 ccgctccaga gctccatgac ccgcttcagg taggcacatc ccctggtgcg ctcggaggct
    13081 ccagcatccg gacgaagcaa cacttgccca cgacggagcc gggcgtagac ccccagcatg
    13141 ccatctatct cgcccgcctg cgccggcccc tggggccagc cttcgatgtc ggagccctcg
    13201 gaccagagcc actcgcgatc ggctccgcga gtatctcccg cggccgcgag ccatgcaccg
    13261 cgatgaagat gaaacgccgc tcgggcgaac gggtcgggtg gatcgctggc attgaatgcg
    13321 atctcgagcg agtcggacag tgcgagggcg gcctgccact ggctttgccc tgccagggcg
    13381 atggccgtga ggaagcgctc cagcgactga ccctgagacc cgccgcctcg aagctggtcc
    13441 ctccagctat gaccctcggt tgtatcacct cgggcgtagg ccgcgagacc caacgcccac
    13501 gccgcccggt gacccagtac agaatcgccc gcaagggcgg ccaggccggc tcgccactcg
    13561 ccggcgtccg agatcggcag ccccagcgct cggagcacca cccgccattc ggcctgctcc
    13621 aggcgagccg cctcgctgcc gaacatcgca gcggccgaat cggcctgggc cagcgcctgg
    13681 cgaggacggc ccagtcccat caatccaatg gcctttccct catgggcgct cgcctgcgtc
    13741 gcggagtcgg attccacgga gctgaggagt aactcgctga gcgccacctg cgactcgggg
    13801 atgtcggacc aagccacccc ggtgcggaac acgcggccga tgccctcgag ctgcgcggag
    13861 tcggcggtcc agccgagata gcggcgcttg agccgggcac gccaaggtac gaagcgctcg
    13921 tcgtaggcaa gtcgtgcgag cggcaggaca tccggatcgc cgtaggagcg actggtgcca
    13981 acgcgccaac gataacggat ggcgtttctg gcgtcggcgc ggcggccctg ccggatggcc
    14041 gcgaacacga gatgatcgta ggccagggcc agggatgaat cgcgcgcaac ggcatccgcc
    14101 atcgcgcgag cgccctcgtc cagtccccgc cccaccagcg gcccccgatg gaacaactcc
    14161 tccgccagga gaagccgggc gtatgcatcg tcgggaaacc gggcaatcac ggtgtccatc
    14221 ctggcaagcc ggacccgaat actcgaatca ctgagtgcct cgatcagctc ccggtcgagc
    14281 ggacgcagcc gagcatcctg acgatcgtag agttttcgga gatcgtcgtc atagggcagc
    14341 cggcgccagc gcttcacgtt ggccaggcgc cacgctgcca gcgcaaaggt ggagtcgaga
    14401 tccagcgcgc tctcgaaatg ccgctcggcc agcgaccagg cgtcctgttg aaaggcggcc
    14461 tcgccccgga ggaactcccg cagcgcgccc aggctcactc tgccgacatc gcctacgacc
    14521 cgataggact cggcgaggtg tggcgcgatg gcccgcacca atgacaccgc cagggtatca
    14581 cccagcgcag cgagatcgga tgcgcgagcg cgcacctccg ggatcggcat tttcctgccc
    14641 gctgagtcgt agaccgtgag ccggatgcgc aggctgtcgc ttcggtgctc gagcaggccg
    14701 taggccagcc agtgcactct cagctcgcga gcggcgttcg ccttctccac accgatgagg
    14761 ctcccgccgt gcccgtccca ccagcgcttg acttgacgcg ggggcgtcat ggaaagcccc
    14821 ggcaagttgt cgagattgag ctggaccaga tgagccagcc ccgcggcgac tgagtcgtcg
    14881 gccggaccgc cctccgactc gaagggcagg atggccatct gtcgtggtgg agtgcccggg
    14941 ccctccgaat tgaccccttc gcgggtcatg gcgtagagga caacgagcac gaggaccgcg
    15001 gccgcgtaca cccaccctcg cccggccttc ctctggccct ccgccgtatc caaggcatcc
    15061 cggaatgcgg ccgcgtcgct ccaccgctct ccaggagccg gcgcgagcgc ccggcgcaac
    15121 accccacgga gccagcgcgg cacccgccac catcgggcga gggtaacggt ggccccactg
    15181 cgccaccgcc tgccggtgag cgcctcgtac accaccattc ccagggcata gaggtcgctg
    15241 cgcgagctga cctcgccacc g
//
LOCUS       DASYRV010000187         5495 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2740205, whole genome shotgun sequence.
ACCESSION   DASYRV010000187 DASYRV010000000
VERSION     DASYRV010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5495)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5495)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5495
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2740205"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..288)
                     /locus_tag="VGQ24_04760"
     CDS             complement(<1..288)
                     /locus_tag="VGQ24_04760"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEV8454174.1"
                     /translation="MRRCNRKLSSCGVTGWCEYPGGGICVALLPGEHLFPTRCPGHER
                     LVHAPFNPEGSMSNRKGFTLIELLIVVVIIGILAAIAIPKFANTKEKAVVAS"
     gene            complement(427..873)
                     /locus_tag="VGQ24_04765"
     CDS             complement(427..873)
                     /locus_tag="VGQ24_04765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEV8454175.1"
                     /translation="MSNRKGFTLIELLIVVVIIGILAAIAIPKFANTKEKAVVASEKS
                     DLRNLVTAQEAFFSDNQDYAGGTYKGDGTVYTQTNGLAGAGRLAFSPSANNTVVVTYI
                     DAAGWKAESTNPAVVSTASDVCGVYVGVAANSPNAAVKAEGAPACY"
     gene            1372..4431
                     /locus_tag="VGQ24_04770"
     CDS             1372..4431
                     /locus_tag="VGQ24_04770"
                     /inference="COORDINATES: protein motif:HMM:NF013713.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454176.1"
                     /translation="MIIVLYVAFVLSGAAGLIYESIWTRYLGLFVGHDAYAQIIVLVI
                     FLGGMSVGAMGISRWSERLKDPLYGYVAIEFAVGCIGLFFHEIFQGVTGWAYQGVYPA
                     LAGSWTLTAAKWAIAGSLILPQSILLGMTFPLMSAGVLRLRAGRPGRTLSLLYFSNSL
                     GASVGVLIAGFYLVELAGLPGTLLTAAMLNLVVAAATVGVIAAARRNAAEPAGERRAK
                     EAAARARASSPTKKRSRLERLLLFTTFGTAVASFIYEIDWIRMLALVLGSATHSFELM
                     LSAFILGLAVGAWWIRSRADQLSDPLRTLGLVQWTMGTLAMATLPLYVFSFDWIASLL
                     ATFARTDAGYMGFTIARYGLCLAIMLPATFCAGMTLPLITQTLLKNGSGERAIGAVYG
                     WNTLGSILGVMLGGLVLLPLIGLKPMLIVGAALDMGIGALLLVRATPVLSRPRRVMIA
                     ATLAAGVLVIVAASSTKLEANLLASGVYRTGIIVKPGQREMKFYRDGRTATVTAARFN
                     ATGVMSLATNGKPDASLSTDWYRACDSTTKPVPLVADPATQALVPLVTLAHMPKAETA
                     AIIGQGSGMSSHLLLGSPNLRQLVTIEIEPQMIEGSRVFYPANRRAFDDPRSHIVIDD
                     AKSYFASEQRRYDLIVSEPSNPWVSGVSGLFTAEFYGRVRQYLSDDGVFGQWLHVYEL
                     DDGLVLSVLAALHQNFRAYEVYLVPSGDLLVVASNRATLPTPDWSVVKFPDLQGDLCR
                     FLPLTPSVLDGLHVAGRAELGPLLDSFGQPNSDFYPVLDLGAERRRYRKDNAAGFPAL
                     ANEWFNLLASMRGRRTTPVFEPEPALPGNPRVRAGSLAAFLRSSVTLDADDPSYGPHA
                     RDAAYQWQLWQTAIRTNQVPRSWELWLEQANIIDKLRTGGVAGAADEEFYGSLNRFMD
                     RHGAPGPARDVVAFRNGMSSWNFAKAIAAADRLMPYAMNQRRWIGADELRDGVVMANL
                     NLGNTSAARRNLDSLAKFSTRTPDDLRTLLLQAYVETAESRIASARR"
     gene            complement(4450..>5495)
                     /locus_tag="VGQ24_04775"
     CDS             complement(4450..>5495)
                     /locus_tag="VGQ24_04775"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEV8454177.1"
                     /translation="ILRRACEFRAVRVENKQLKQEIRRRERAGTTVTRPIGKSKRFLE
                     VLKLAEHVAPTDSTVLIQGESGTGKEVVARYVHNLSNRTEGPFLSINCGALPENLLES
                     ELFGHVKGSVTGAVRDKQGLFAAARGGSFFLDEVGEMPASLQVKLLRVLQEREAIPVG
                     ATEAIPVDVRIIAATNRELEEEIRRGNFRSDLFYRLNVIAVNLPPLRDRRDDLVLLIE
                     FLLQNLATETGTEPKALAAEALDAVMVYEWPGNVRELENALEHAQVLTRGALIEAACL
                     PERITKRRKDPLVAERSFLNPTLEVIERAYIMWVLQAEGGNKTRAAEVLGIDPSTLYR
                     KLSRYEEQVEVKV"
BASE COUNT          891 a         1815 c         1746 g         1043 t
ORIGIN      
        1 cgaagccacg accgccttct ccttcgtgtt ggcgaacttc ggaatcgcga tcgctgccag
       61 aatgccgatg atcacgacca cgatcagaag ctcgatcagg gtaaagccct tgcggttgct
      121 catactgccc tccgggttga atggggcgtg gaccaatcgc tcatgtccgg ggcagcgagt
      181 tgggaaaaga tgctcacccg ggagtaaggc aacacatatg ccaccccctg ggtactcgca
      241 ccaaccagtg acaccgcagc tacttaactt ccgattgcac cgccgcatgc gagcgtattg
      301 cgactccggt aaagcggatt ttgcaaggga gcggcgggag ggcaggctgc aagcttcgac
      361 gctgaacaac ccacaacaaa aaggcggtgc cggacggcac cgcctttctg attcactacg
      421 cccggcttag tagcaggccg gcgcgccctc agccttgacg gccgcgttcg gcgaattggc
      481 cgccacaccc acatacacac cgcagacgtc gctcgcggta gagaccaccg cggggttcgt
      541 cgactcggcc ttccagcccg ccgcgtcgat gtaggtaacg acgacggtgt tgttcgcgct
      601 cgggctaaag gccaaccggc ccgcgcccgc cagaccgttg gtctgggtgt agacggtacc
      661 gtcgcccttg tacgtaccac cagcgtagtc ctggttatcc gagaagaacg cttcctgggc
      721 agtgaccagg ttgcgcaggt cggacttctc cgaagccacg accgccttct ccttcgtgtt
      781 ggcgaacttc ggaatcgcga tcgctgccag aatgccgatg atcacgacca cgatcagaag
      841 ctcgatcagg gtaaagccct tgcggttgct cattacttcc tccggttgag tgccgtgacc
      901 atcgaacaat ggggctgcgt tgtgactgcc gacggtaagg caacacgtat gccacccttg
      961 tgccgccacg accaacgcga atcagagtag ctacttaact accgtttgca cggtcaggtg
     1021 cagagtttct acgagctcca tccggcggat tttgcaaatg cgcatccggc agcactgggt
     1081 tggaaactgg cggagatggt ggtttcgacc gccatccttc cggtgcagtc ctagcaaaac
     1141 tcgcgcgaag gtgccggcac cgaccccgcg gcctcccctc tggaggaacg cccttagcgt
     1201 ggctggtcgc ggcgcgggaa atggcctggt gcccggaaga gttccacctc aactcccgcg
     1261 gccgcagtta gatgcagcaa tccacccgac cgtgccaact cttgcatgct tcttgcccgt
     1321 caagcggcgt gagaccaccg ccgtcgctgt ttaccgcttc cgggatcacc catgatcatc
     1381 gtgctttacg tcgcattcgt cctctccggt gcggccggcc tgatctacga atcgatctgg
     1441 acccgctatc tgggcctgtt cgtggggcac gacgcctacg cgcaaatcat cgtgctggtc
     1501 atcttcctgg gcggcatgtc cgtcggggcg atgggaatca gccggtggtc ggagcggctg
     1561 aaggatccat tgtatggcta cgtcgcgatc gagttcgcgg tcggctgcat tggactcttc
     1621 tttcacgaga tcttccaggg tgtaaccggc tgggcctatc aaggcgtcta ccccgcactc
     1681 gcgggatcct ggacgctcac cgcggccaag tgggccatcg cgggcagcct gatcctcccc
     1741 cagtcgatcc tgctggggat gacctttccg ctcatgagcg ccggcgttct ccggcttcgt
     1801 gcgggccggc cgggacgaac gctttccctg ctgtacttct cgaatagtct gggtgcatcg
     1861 gtcggcgtgc tgatcgccgg cttctacctg gtggagctcg ccggcctgcc cggtaccctg
     1921 ctgacggcag ccatgctgaa cctggtcgtg gccgcagcga cggtcggcgt catcgcggcg
     1981 gctcggcgga acgccgcgga gccggctggt gagcgtcgtg cgaaggaagc cgccgcacgg
     2041 gcccgcgcct cgtctcccac gaagaagcga agccgcctcg agcggctcct gctcttcacc
     2101 accttcggga ccgcggtcgc gtcgttcatt tacgagatcg actggatccg catgctggca
     2161 ctggtcctcg gcagcgcaac gcattcgttc gagctgatgt tgtcggcctt catcctgggg
     2221 ctcgcggtag gcgcgtggtg gatccggtcc cgggcggacc agctcagcga tccgctccgg
     2281 acgctggggc tggtgcaatg gacgatgggt acgctcgcca tggcaaccct tccgctctac
     2341 gtcttctcgt tcgactggat cgcgtcgctc ctggccacct tcgcccgcac cgacgccggt
     2401 tacatgggct tcaccatcgc ccgctacggc ctgtgtctgg ccatcatgct cccggccacg
     2461 ttctgtgccg gcatgaccct gccgttgatc acccagacgc tgctgaagaa cggatcgggt
     2521 gagcgggcca tcggtgccgt gtacggctgg aatacactcg gttctatcct gggtgtcatg
     2581 ctcggtggct tggtgctgct gccgctgatc ggcctcaagc ccatgctcat cgtcggcgcc
     2641 gcgctggata tggggattgg agcccttctg ctggttcggg ccaccccggt cctgagccgt
     2701 ccccggcggg tgatgatcgc cgcgacgctc gcggccggtg tactcgtcat cgtggccgcg
     2761 agcagcacca agctcgaggc gaatctcctg gccagcggag tgtaccggac cggtatcatc
     2821 gtcaagcccg ggcagcggga aatgaagttc taccgggatg ggcgcaccgc cacggtcacc
     2881 gcggcgcggt tcaatgcgac cggggtcatg tccctggcta ccaatgggaa gccggacgcc
     2941 tcgctcagca ccgactggta ccgggcgtgc gattccacca ccaagccggt tcctctggtt
     3001 gccgacccgg ccacccaggc gctggtgccg ctggtgaccc tggctcacat gcccaaggca
     3061 gagacggcgg ccatcattgg acagggctcc ggcatgtcca gccacctcct gctgggaagc
     3121 ccgaatctac ggcagctggt gaccatcgag atcgagccgc agatgatcga aggctcccgc
     3181 gtgttctatc cggccaaccg gcgtgccttc gatgatccgc gctcccacat cgtgatcgac
     3241 gatgccaagt cgtacttcgc ctcggagcag cgccgctacg atctgatcgt gtcggagccc
     3301 tccaatccgt gggtcagcgg tgtctcgggc ctgtttacgg cggagttcta cgggcgggtc
     3361 cgccagtatc tgagcgatga tggcgtgttc ggccaatggc tgcacgtcta cgagctggac
     3421 gatggcctgg tgctgagcgt gctggccgcg ttgcaccaga acttccgggc ttatgaggtg
     3481 tacctcgtac cgagcggcga cctgctcgtg gtcgccagca atcgggcaac tctgccgaca
     3541 ccggactggt cagtggtgaa attccctgac ctccagggcg acttgtgccg cttcctgccg
     3601 ctgactccct cggtgctcga tggccttcac gtggcgggac gggccgagct tggcccgttg
     3661 ctcgattcct tcggccagcc gaactcggac ttctacccgg tgctcgacct gggagcggag
     3721 cggcggcggt accgaaagga caatgcggca ggcttcccgg cgctggcgaa cgagtggttc
     3781 aacctgctgg cctccatgag ggggcggcgt accacccctg ttttcgagcc tgagccagcc
     3841 ctgcccggaa acccgagggt gcgggccggc tcgctggcgg ctttcctccg ttccagcgtc
     3901 acgctggacg ccgatgatcc gtcgtatggt ccgcatgccc gcgacgcggc gtaccagtgg
     3961 caactctggc agacggcgat caggaccaac caggtcccac gcagctggga gctgtggctg
     4021 gagcaagcca acatcatcga caagctgcgt actggagggg tggccggagc cgcagacgaa
     4081 gagttctacg gcagcctgaa tcgcttcatg gaccggcacg gcgctcccgg gcctgcccgc
     4141 gatgtggttg cgttccgtaa cggcatgtca tcctggaact ttgccaaggc gatagcggcc
     4201 gcggatcggc tgatgcctta cgccatgaac cagcgccgct ggattggggc ggatgagctg
     4261 cgggacggcg tggtcatggc caacctcaat ctggggaata cgagcgccgc gcggcggaac
     4321 ctggattccc tggccaaatt cagcacccgt acaccggacg accttcggac gctgctgctt
     4381 caggcctacg tggaaacggc ggagagccgg atcgccagcg cccggcgctg acccggtgct
     4441 cccgggagct cagaccttta cttcgacctg ttcctcgtac cggctgagct ttcggtagag
     4501 ggtcgagggg tcgataccga gcacttcagc ggcgcgggtc ttgttgccgc cttcagcctg
     4561 aaggacccac atgatgtagg cccgctcgat cacctcgagc gtcggattga ggaaggatcg
     4621 ctcggccacg agcgggtcct tccgccgctt cgtgatccgc tccggcaagc atgcggcctc
     4681 gatcagcgcc ccacgcgtga gcacctgcgc gtgctccagc gcgttctcca gctcgcgcac
     4741 attccccggc cactcataga ccatgaccgc gtccagcgct tcggccgcga gggccttcgg
     4801 ctcggtgccg gtttcggttg ccaggttttg gagcaggaac tcgatcagga gcacaagatc
     4861 gtcacgccgg tcccggagcg ggggcaggtt gacggcaatg acgttgagcc ggtagaagag
     4921 gtcggacctg aagttgccgc ggcggatctc ctcctccagc tcccggttgg ttgccgcgat
     4981 gattcggacg tccactggaa tcgcctcggt ggcgccgacc gggatcgcct cccgctcctg
     5041 gagtacccgc agcagcttga cctgcagcga cgccggcatc tcgccgacct cgtccaggaa
     5101 gaagctcccg ccccgcgccg cggcgaagag gccctgcttg tcccgcaccg ccccggtgac
     5161 gctgcccttc acgtgcccga agagctcgct ctcgagcagg ttctcgggca aggcgccgca
     5221 gttgatcgag aggaagggcc cttccgtccg gttggagagg ttgtgcacgt agcgggcgac
     5281 gacctccttg ccggtgccgc tctcgccctg gatcagcacg gtcgagtcgg tcggcgccac
     5341 gtgctcggcg agcttcagca cctcgaggaa cctcttcgat ttcccgatcg ggcgagtgac
     5401 ggtggtaccg gcccgctccc gccgccggat ctcctgcttg agctgcttgt tctccacccg
     5461 gaccgcgcgg aactcgcagg ctcggcgcag aatgg
//
LOCUS       DASYRV010000188         8340 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2147921, whole genome shotgun sequence.
ACCESSION   DASYRV010000188 DASYRV010000000
VERSION     DASYRV010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8340
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2147921"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..547)
                     /locus_tag="VGQ24_04780"
     CDS             complement(<1..547)
                     /locus_tag="VGQ24_04780"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEV8454178.1"
                     /translation="MQDHAELVERFRAALASRYRLVREVGRGGMATVYLADDLRHDRR
                     VAVKVLRPELAAALGPERFLREIQIAAVLAHPHILPLHDSGEAGGFVFYVMPYVEGET
                     LRDRLVRQHHLPIGEAVRIVQEVADGLGYAHSLGVVHRDIKPENILFMGGHAVVADFG
                     VATAVGVAGGERLTETGWSVGT"
     gene            complement(734..1147)
                     /locus_tag="VGQ24_04785"
     CDS             complement(734..1147)
                     /locus_tag="VGQ24_04785"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8454179.1"
                     /translation="MTAAPKARQHTVLVVDDEATVRSLTARMLEEHGYRVLEADDGVD
                     ALNLLESKDEHIDLVISDVVMPRLDGLELARCMEIMPHPPPILLMSGWGLSALEFERP
                     FLVKPFHADELLAAVCRLLNASGQEDQGSSDATPS"
     gene            1410..2027
                     /locus_tag="VGQ24_04790"
     CDS             1410..2027
                     /locus_tag="VGQ24_04790"
                     /inference="COORDINATES: protein motif:HMM:NF024934.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEV8454180.1"
                     /translation="MKLKQMLWEPNRPIEAVYFPIDAVASILALTDGHTVEVGTIGNE
                     GLVGLPVFLGATTSPGRAMVQVAGQGERLDVAVFRREAHREGRLRQLLERYTQAFMTQ
                     VSQSTACNRAHSVEQRLARWLLIVRDRVDRNEFPLTHEFLGQMLGVRRATVSETAAAL
                     QRVKLISYHRGVITIRNGRGLERAACECYRLVRQEFERLLGTQAG"
     gene            complement(2044..2517)
                     /locus_tag="VGQ24_04795"
     CDS             complement(2044..2517)
                     /locus_tag="VGQ24_04795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEV8454181.1"
                     /translation="MSHYSAAVSWHRGDAPFVDQRYSRAHVWKFDGGAVVRASSSPEV
                     VPLSYSDPSAVDPEEAFVAALASCHMLWFLSIAAKNGFCVQAYRDAAVGTMAANSRGT
                     LCMTVVNLRPHTVFTAAKMPSLQAVREMHEEAHQQCYLANSVTTVVTTEPTFELA"
     gene            2762..3154
                     /locus_tag="VGQ24_04800"
     CDS             2762..3154
                     /locus_tag="VGQ24_04800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454182.1"
                     /translation="MAAAADRRAAQEVAEAEGAARRVDPVAAAARRAAQEVAVGAQEV
                     AAVVGRRVDPVGVAVVVRADRAAAVEAVRVVEVRRADPVAAGSVEVAAAARRAAKVVA
                     AVVGVVAKVVARVAAEVAATGSREAANN"
     gene            3254..3601
                     /locus_tag="VGQ24_04805"
     CDS             3254..3601
                     /locus_tag="VGQ24_04805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454183.1"
                     /translation="MVRIFRRLGAALLLIAFAGGGPGLPELDAILFHSHGEIIRADVA
                     HLDLPGGCGAHVEKCVLSTVLSGPQLAEFGLVKVRGARAASRAAAFQPALALRSADRS
                     FLYPSRAPPAPAC"
     gene            3698..5950
                     /locus_tag="VGQ24_04810"
     CDS             3698..5950
                     /locus_tag="VGQ24_04810"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEV8454184.1"
                     /translation="MHRLLLALALAAQATARLAHASDPAPRAASEVSGTVTDTTGTPL
                     ADARVVLVGLHRAASTSPEGKFSFPAVAPGVYQLSVSAIGFAPVIERVTVVASNVTLQ
                     IRLRASIVELQAIQVTASPNATTLLDSPQPASALSGDELRLAQAPSLGETIEQLPGVR
                     SLSTGTGIGKPVIRGLTSNRVLVIADGQRLETQQWGDEHGPNVDTDDADRVEVIRGPA
                     SVLYGSDALGGVVNVVSKELPDAIGRQGFVAGRVTTAYSTNNRQPDGTVALEGAQGGL
                     GFRTSFTGRTSDDIGTPVGPLFNSGNRSLGGSGSVGYRGGWGSVNASYTHRDERLEIH
                     EDPAEDPTATPLQRIGEDRGKVGLTLPLGNSRLEADVGIERNRRREFEAEDATDVALG
                     LLSKTYTANVHYHHAPIGRWAGAVGVSSIFNTFDKFGEETLIPNTRVKSGGAYIFEQA
                     EYGRWHLSFGGRYDYRRLDADADAELGTVAQRRTYNSVTGNVGVLYHLSEPTALVLNV
                     GRGFRAPSSFDLFANGVHEGTVAFERGDPDLKNEHSLNTDLAFRVQTSSIRAEVGAFA
                     NFIQNFIFSLPTAETDPASGFQIFQVSQGDARLLGLEAAFEYHATRYLHLQGTADYTN
                     GSNTTTDQPLPSIPPFRATYTARLEGERLGWLESPYFSVGGESNSRQTRLDPSEAEFF
                     ALSAYQPDGYTLLDLGVGFTLPTGRDGLRVDVTLRNALDRQYTNFLSRYKTYALDAGR
                     NLTVRLSTGF"
     gene            6112..6447
                     /locus_tag="VGQ24_04815"
     CDS             6112..6447
                     /locus_tag="VGQ24_04815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454185.1"
                     /translation="MSQKRGREARLRTEHAQLYPGIEPGVWMPVESLLHHITDLIHED
                     PLKAGVITGTRLLHQEHFEYRGSSVRPEGLPEGSTRLSDSGAEPGRRDPTQIRSSAHA
                     PGERRGHQA"
     gene            6486..6758
                     /locus_tag="VGQ24_04820"
     CDS             6486..6758
                     /locus_tag="VGQ24_04820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454186.1"
                     /translation="MRADVRQALLKSRFAHLYPGIAPGEWQPATVMVDQVLALRPGTP
                     LARVGNRDRVLDGRHFEFRGRLSAGALDDQRRSRLEVRQERRDESE"
     gene            6897..7319
                     /locus_tag="VGQ24_04825"
     CDS             6897..7319
                     /locus_tag="VGQ24_04825"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8454187.1"
                     /translation="MSLPDVRNAPSILVVDDQATVRRMAHRLLNEWGFRVFEAESGEE
                     ALEVLETARAGVQLVIVDVVMPLADGVQVTRAIQERRPGQRTLYMSAHPAEVLMQYGL
                     SELDAPFLAKPFTRDELLTKVSEALARPTSHPTQRPPR"
     gene            complement(7479..>8340)
                     /locus_tag="VGQ24_04830"
     CDS             complement(7479..>8340)
                     /locus_tag="VGQ24_04830"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEV8454188.1"
                     /translation="VDYLVKPVVPEFVRSKVAVFVELAKKNELLRRQAQLLAESEQAA
                     LGLAETRAELVRDLEHKNRELESFSYAVSHDLRAPLRRIDSFSRAVLESQGDRLDEAG
                     QRFLSRVREASQHMSQLIDDVLYLSRVTRAELREQEVDLSGIAGLILARLQEGEPERK
                     VDVKVRPGVLVTGDGQLLKIAMENLIENAWKFTSKEPESRIEFGMTQTGGEATYFVRD
                     NGAGFDMTYTDRLFGPFQRLHPQGEFPGNGIGLATVQRIIHRHGGRVWAEGLLGQGAT
                     FYFTMGRPRS"
BASE COUNT         1471 a         2702 c         2723 g         1444 t
ORIGIN      
        1 gcgtgcccac cgaccacccg gtctccgtga gccgttcgcc ccctgccacc ccaaccgccg
       61 tggccacgcc aaaatcggcg accaccgcgt gtcctcccat gaacaagatg ttctccggct
      121 tgatgtcgcg gtgcacgacg ccaaggctgt gggcgtagcc gaggccatct gccacctctt
      181 gcacgatccg aacggcctcc ccgatgggca ggtgatgctg acggaccaac cgatcacgta
      241 gtgtctctcc ctcgacgtac ggcatgacgt aaaacacgaa accaccggcc tcgccggagt
      301 cgtgcagggg aaggatatgg ggatgcgcga gaacggcggc gatttggatc tcgcgtagga
      361 agcgctccgg cccaagcgcc gcggccagct cgggcctcag aaccttgaca gccacccgcc
      421 ggtcatgcct gagatcatcg gcaaggtaga ccgtcgccat ccccccgcgg ccgacctctc
      481 gcacgaggcg gtagcgcgag gcaagagcag ctcgaaatcg ttcgacaagc tccgcgtggt
      541 cctgcaagac gttcgcctcc caccgatggc atcacgaaaa atgaagcgag ggggtcgaga
      601 agaccagcag aaagcagggg cggcagcgcg aaccggcgct gagcggccca ggcggtcggg
      661 ccgtgttcgc cggaatcaaa cagcggaaga atgtgcgggt gacagaggtt cgctgtggta
      721 cggctctggc caactaactc ggggtggcat ccgagctccc ctgatcctct tggcctgatg
      781 cgttgagaag gcggcacact gccgccaaca gctcgtccgc atgaaatggc ttgaccagga
      841 atggccgctc aaattccagc gcactgagcc cccagcccga catgagcagg atcggcggtg
      901 ggtggggcat gatctccatg catcgggcca gttccagccc atcgagacga ggcatcacca
      961 catcggatat cacgagatcg atgtgctcgt ccttgctttc caacaggttc aacgcgtcaa
     1021 ccccatcgtc ggcctcaagg acacggtacc cgtgctcttc aagcattcgc gcagtgagcg
     1081 agcgaacggt cgcttcatcg tcaaccacaa gaaccgtgtg ctggcgggcc ttcggagcgg
     1141 ccgtcatctg acatcccgcg tcagagccgt gagggtattt cgccattctg catattgcgc
     1201 ctgtcatgag gaccggtacg tttgccgaca taatacggct tcggagctcg gtacgctagc
     1261 gtaccgaaga gagcgacagg atgcccagac ccagagcaag gtcaaccgcc aaaccgccat
     1321 cccgccccaa gcaaaacgca aatcaactcc tcgctgccct tccgcccgag gactatgctc
     1381 gactccggtc cgagctggcg acggtgccca tgaaactgaa gcagatgctc tgggagccga
     1441 accggccaat cgaagcagtg tatttcccca tcgacgccgt cgcttcgata ctcgccctca
     1501 ccgacggcca cacggtcgag gtcggcacca tcgggaatga ggggctggtg ggactcccgg
     1561 tgttcctcgg cgccactact tccccgggaa gggccatggt ccaggtcgcc ggtcaaggcg
     1621 agcgcctgga cgtcgcggtc ttccgccgag aggcacacag ggaagggcga cttcgccagc
     1681 ttctggagcg ctatactcaa gcgttcatga cccaagtctc ccagagcacc gcctgtaatc
     1741 gcgcgcattc cgtcgagcag cgccttgcgc gctggcttct tatcgtccgt gatcgggtgg
     1801 atcggaacga gtttccgctc acccacgagt ttttggggca aatgctcggc gtgaggcgag
     1861 ccacggtgtc cgagaccgcc gcggcactcc agcgagttaa gctgatcagc tatcaccgcg
     1921 gtgtgattac gatccggaat ggacgggggt tggaacgggc ggcctgcgag tgctatcggc
     1981 tcgtccgcca agagttcgag cggctactcg gaactcaggc ggggtgaaga cccgaatcgt
     2041 gattcaggcg agctcgaacg tgggctcggt cgtcacgaca gtcgtgaccg agttggccag
     2101 gtagcattgc tggtgggctt cctcgtgcat ctctcgcacg gcctggagag acggcatctt
     2161 ggcggccgtg aagacggtgt gtggccggag gttcacgacg gtcatgcaga gcgtccccct
     2221 gctgttcgcc gccatcgtgc ccacggcagc gtcccggtac gcctgaacgc agaaaccgtt
     2281 cttcgccgca atcgagagga accacagcat gtggcagctg gcgagggcgg ccacgaacgc
     2341 ttcctcggga tccactgcgc tgggatctga gtaggacagc ggtacgacct cgggtgagct
     2401 ggaggcccgg acgaccgccc caccatcgaa cttccagacg tgcgcgcgac tgtaccgttg
     2461 gtccacgaag ggcgcgtccc ccctgtgcca ggaaactgcg gcggagtagt ggctcacctc
     2521 ttccctccca ttcagaggat accgaccaag ccgttttgtg aggaaactca ctccctcggt
     2581 ctccttcaga caacatatat ttcgacgccc tgttgggccg gggctgggat atccgtgcgg
     2641 gcgtggccgc cggatcgagc gtctatcccc gaaactcagg ccgtcgctcg gcggcggcca
     2701 tcctcaagga gtcgatgcat ggccaatcgc gaaggcggca aacctggcgg cggcggccca
     2761 ggtggcggcg gcggcggaca gaagggcggc ccaggaggtg gcggaggcgg agggggcggc
     2821 cagaagggtg gacccggtgg cggcggcggc cagaagggcg gcccaggagg tggcggtggg
     2881 ggcccaggag gtggcggcgg tggtgggcag aagggtggac ccggtggggg tggcggtggt
     2941 cgtccgggcg gaccgggcgg cggcggtgga ggcggtcagg gtggtggagg tcagaagggc
     3001 ggacccggtg gcggcgggtt cggtggaggt ggcggcggcg gccagaaggg cggccaaggt
     3061 ggtggcggcg gtggttgggg tggtggccaa ggtggtggcc agggtggcgg cggaggtcgc
     3121 ggcgacaggt agtcgggagg ccgccaacaa ttgagctaga ctctcgaggc ccggcgccgt
     3181 gcgcgttgta ttagcgtacg gcgtcgagtt ttttggagtg gacaaggatc gctcgggagc
     3241 ctagactgct ggcatggttc ggatcttccg ccggctcggt gcagcgctcc tcctcatcgc
     3301 ctttgccggt gggggcccgg gcctgcccga gctcgacgcc atccttttcc actcccatgg
     3361 cgagatcata cgggccgatg tggcccacct ggatttgccg ggaggctgcg gcgcgcacgt
     3421 cgagaagtgc gtcctcagca cggtcctgtc cggtccccag ctcgccgagt tcggcttggt
     3481 caaggtccgc ggcgcgcggg ctgcctcccg agccgccgca ttccagccgg cacttgctct
     3541 ccggtcggcc gatcgaagct tcctctaccc atcccgcgct ccgcctgctc ctgcctgctg
     3601 aatcgggttt ctgacccggc tcaactccca caacgtgtga tcggccacgt gcctcttcag
     3661 gcacggattc cgctcaccat ccggtttagg aggcaggatg catcgtctac ttcttgcgct
     3721 tgcgctggcc gcgcaggcga ccgctcgact ggcccatgct tcggatccgg cgcccagagc
     3781 ggcgtccgag gtcagcggta ctgtcactga caccaccggc accccgctgg ccgacgcgcg
     3841 cgtcgttctg gtgggcctgc atcgcgccgc gtcgaccagc cccgagggga agtttagttt
     3901 cccggcggtc gcgcccggtg tgtatcagct ttcggtctcg gccatcgggt tcgccccggt
     3961 gatcgagcgg gtcaccgtcg tcgctagcaa tgtcaccctg cagatcaggc tgcgggcctc
     4021 tatcgtggag cttcaggcga tacaggtcac cgctagcccg aacgcaacca cgctgctcga
     4081 ctcccctcaa ccggccagcg ccctcagcgg tgacgagctg cgcctggcgc aggccccttc
     4141 cctgggtgag accattgagc agcttcccgg cgtgcggagc ctcagcacgg gaaccggcat
     4201 cggcaagccg gtgattcggg gtctcacctc caatcgcgtc ctcgtgatcg ccgacggcca
     4261 gcggctcgag acccagcagt ggggtgacga gcacgggccc aacgtggata ccgatgacgc
     4321 cgatcgggtg gaagtgatcc gcgggccggc gagcgtactc tacggctcgg atgcgctcgg
     4381 cggcgtggtc aacgtcgttt cgaaggagct gccggacgcc atcggacggc agggtttcgt
     4441 ggcggggagg gtaacgaccg cgtacagcac caacaaccgg cagcccgatg gcacagtggc
     4501 actggaaggt gcccagggcg gcctgggttt caggacctca ttcaccggtc ggaccagcga
     4561 cgacatcggc accccggtag ggccgctctt caatagcggc aatcggtcac tggggggtag
     4621 cggctcagtt ggctatcgcg gtgggtgggg aagtgtcaac gccagctaca cccaccggga
     4681 tgagcggctc gagattcacg aagatccggc agaggatccg acggccactc cactccagcg
     4741 aattggagag gaccgtggca aagtcggtct gacgctgccg ttggggaact cccgcctgga
     4801 ggcggacgtc ggcatcgagc gaaaccggcg tcgcgagttc gaggcagagg atgccaccga
     4861 tgtcgcgctc ggcctgcttt cgaaaaccta caccgcgaac gtgcattatc accacgctcc
     4921 cattgggcga tgggccggtg cggtgggagt gtcaagcatc ttcaatacct tcgacaagtt
     4981 cggggaggag acgttgatcc cgaatacccg ggtgaagagc ggcggagcct acatcttcga
     5041 gcaggctgaa tacggccgct ggcacctgtc gttcggtggc cgatatgatt atcgacggct
     5101 cgatgccgat gcggacgccg agctgggcac tgtcgcgcag cgtcgcacgt acaactcagt
     5161 cacgggaaac gtcggcgtgt tgtaccatct ctccgagccg accgccctag ttctgaatgt
     5221 cggacgcggt ttccgcgccc cctcgagctt cgacctgttt gccaatggag tccacgaggg
     5281 caccgtggcg ttcgagaggg gtgaccccga cctgaagaac gagcactcgc tcaacaccga
     5341 tctcgcgttc cgggtacaaa cctcgagcat ccgggccgag gtgggcgcat ttgccaactt
     5401 cattcagaac ttcatcttct ccctgcctac ggcggagacc gacccggcct ctggcttcca
     5461 gatcttccag gtgtcccaag gcgacgcgcg tctgctggga ttggaagcgg ccttcgaata
     5521 ccacgccacc cggtacctgc acctgcaggg caccgccgac tataccaatg gctcgaacac
     5581 gaccaccgac cagccgcttc cgtcgatccc accgttccgg gccacctaca ccgcgcgcct
     5641 cgagggcgag cgcttggggt ggctggaaag cccgtacttc tcggtgggcg gtgagtccaa
     5701 ttcccgtcaa acccggctcg atccaagcga ggcggaattc ttcgcactca gtgcctatca
     5761 gccggacggc tacaccctcc tcgacctcgg tgtgggattc acgctaccga cgggacggga
     5821 tggtctcaga gtagacgtca ctttgcgtaa tgcgctcgac cggcaataca ccaattttct
     5881 gagtcgctat aaaacgtacg cgctggacgc cggcaggaat ttgactgttc gactcagcac
     5941 cgggttctag caccctacgg cccgaggcgg tggcgtctcc ggattcaggg gcgccccgcc
     6001 gctcgctcct tcttgccctc gcgttccggc ggtatactag agggcgctcc gaacaccacc
     6061 gccacgacgc gccaggacca acggcctcgc agtggcatca ttgagaagcg gatgagtcaa
     6121 aaacgcggcc gtgaggccag gctcaggaca gagcacgccc aactgtaccc cgggatcgag
     6181 ccgggcgtct ggatgccggt ggaaagtctg ctccaccaca tcaccgacct gattcatgag
     6241 gatcccttga aggccggggt cattaccggc acgcggctgc tccaccagga gcacttcgaa
     6301 taccgcggca gctcggtccg gccggagggt ctccccgaag gctccacccg tctcagcgac
     6361 tccggtgcgg aacccggccg gcgtgacccg acccagattc gctcgtccgc acacgcgccg
     6421 ggcgaaagaa gaggccacca ggcatgagcg aagactccag ggctggcgtg cagcgagggc
     6481 gtcgggtgag agctgatgtg cgtcaggcgc tcctcaagtc ccggttcgcc catctgtacc
     6541 ctggtatcgc cccgggggaa tggcagccgg caacggtaat ggtggaccag gtgcttgcct
     6601 tgcgacccgg cacacctctc gcccgcgtgg ggaaccgcga ccgcgttctc gacggccgcc
     6661 atttcgagtt ccgtggacgg ctctcggccg gggccctgga tgaccagagg cgatcgaggc
     6721 tcgaggtccg ccaggagcgc cgggacgagt cggagtagta ccggactact tcttgaaggc
     6781 gcggagcggg tcgcgccttt tttcattaat gtgacctggg tcaccatccc ggtatgaact
     6841 gactaggtat ctttcgcggg cttcttgttt tctcttacag gaatcgactc gctaacgtgt
     6901 ctctccctga tgtccggaac gctcccagca tcctggtcgt cgatgaccag gcgacggtac
     6961 gtcgcatggc gcatcgtctt ttaaatgaat ggggattccg ggtcttcgag gccgagagcg
     7021 gcgaggaggc cctcgaagta ctcgagaccg ctcgagccgg ggtccagctc gtcatcgtcg
     7081 atgtcgtgat gccgctggct gacggggtac aggtcacgcg cgccattcag gagcggcggc
     7141 cggggcaacg gaccctctac atgtcggccc acccggcaga agtgctcatg cagtatggac
     7201 tgagcgagct cgacgcgccg ttcctggcca agccgtttac ccgggacgag ctgttgacca
     7261 aggtcagcga ggcactcgcc cggcccacat cgcaccccac ccagagaccc ccgcgttaga
     7321 gcctgatccc tcggagctgg taagtcacaa gccggcacga gagtgcccgg cggcggagcc
     7381 gcatccacga tcgagctgcg ggattgtgaa ggcgagagag cggagtcagg ctgcgggaga
     7441 tgctgcggtt ccagccagga gaaaagagcc gtagtggtct aggatcgggg gcggcccatt
     7501 gtgaagtaga aggttgcgcc ctgccccagg aggccttctg cccagacccg gccgccgtgt
     7561 cggtggatga tgcgctgcac cgtggccagc ccgatgccgt tcccgggaaa ctcgccctgc
     7621 gggtgcaggc gctggaacgg tccgaagagc cggtccgtgt acgtcatgtc gaaccccgcg
     7681 ccgttatccc gcacgaagta ggtcgcctcg ccgccggtct gcgtcatccc gaattcaatg
     7741 cgtgactccg gctctttgga cgtgaacttc caggcgttct cgatcaggtt ctccatcgca
     7801 atcttgagca gctgaccgtc cccggtcacg aggacccccg ggcggacctt cacgtccacc
     7861 ttgcgctcgg gctcaccctc ctggagccgc gcgaggatca gacccgcgat gccgctcaga
     7921 tctacttcct gctcgcgcag ctcggcccgg gttacccggg acaggtacag cacgtcgtcg
     7981 atcagctgcg acatgtgctg gcttgcttcg cgcactcggc tcaaaaagcg ctgtcccgcc
     8041 tcgtcgagcc ggtcgccctg actctcgagc accgcacggc tgaagctgtc gatccgccgg
     8101 agcggcgccc tcaaatcgtg cgagacggcg tagctgaagc tctccagctc ccggttcttg
     8161 tgctcgagat cgcgcaccag ctcagcccgg gtttcggcca gccccagtgc cgcctgctcg
     8221 ctctccgcca gcagctgggc ctgccggcga agcagttcgt tcttcttggc cagctcgacg
     8281 aataccgcga ccttcgaccg cacgaattcc ggcaccaccg gcttgaccag atagtccacc
//
LOCUS       DASYRV010000189         7138 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_280399, whole genome shotgun sequence.
ACCESSION   DASYRV010000189 DASYRV010000000
VERSION     DASYRV010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7138
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_280399"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..377
                     /locus_tag="VGQ24_04835"
     CDS             <1..377
                     /locus_tag="VGQ24_04835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454189.1"
                     /translation="SEGGLAVALAEAVIGGPYVPGSLGADLDLTGYAPDVPVDGLLYG
                     EDGARAVVSCAPPSSRFLIALANEHGVPVFHAGRVQSAGALELQVGSQMFSWSTEALR
                     RIYFDAIPRRMQHPDVDRAVGE"
     gene            379..1773
                     /gene="purF"
                     /locus_tag="VGQ24_04840"
     CDS             379..1773
                     /gene="purF"
                     /locus_tag="VGQ24_04840"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEV8454190.1"
                     /translation="MCGIIGVSGISDAARLAYLGLYALQHRGQESAGIVAIDRDGTPR
                     SHRGMGLVAENFDDELLAGLPGDVAVGHTRYSTTGSTVLANAQPCSVNTRCGPLAIAH
                     NGNLVNANVIKRELVERGAIFTSSSDTEVLVHLIARSEAHTADEQIREALEQVDGAYS
                     LVMTVGRTMYAVVDSRGFRPLVIGRFGNGIVVASETCALDLIGASFHCELRPGDFVRI
                     ENGQVTHLPRLAPRPVTRCVFELVYFARPDSMVFGESVDRVRRELGRQLAREQPALGG
                     EVVFSVPDSSNAMALGFSEVSGIKLEYGLIRNHYVGRTFINPTQALRVAKVKIKFNPV
                     REVIHGKSVVVVDDSLVRGNTSKELVQMIRGAGAREVHLRLGSPPITGPCHYGIDTPT
                     REELIGASHSIEEIRQFLGVDSLGYLSLDGMLQAAGKETGFCHACFSGKYPTPTPDDP
                     MRLRHATPLIATPA"
     gene            1770..4436
                     /gene="ppdK"
                     /locus_tag="VGQ24_04845"
     CDS             1770..4436
                     /gene="ppdK"
                     /locus_tag="VGQ24_04845"
                     /EC_number="2.7.9.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016291309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050242 - pyruvate, phosphate dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0015976 - carbon utilization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HEV8454191.1"
                     /translation="MSGPYTQPLVYSFGQGRADGTAAMKDILGGKGAGLAEMTTIGIP
                     VPPGFTIASNLCLHYLESHQFPKRLQAQVENALQRLEIASGKHFGDGENPLLVSVRSG
                     AAVSMPGMMETILNLGLNDATVEGLANQSGNSQFAWDSYRRFVQMYGSVVFDLSRKPF
                     EQVLDEHKQRCRIERDIDLPVEEMQAIVRRFKEYVRAESGREFPAEPLDQLWGAIAAV
                     FESWNTRRAIDYRKLHDIPDSMGTAVNIVAMVFGNLGDDSGTGVTFSRDPSTGEQRLY
                     GEYLINAQGEDVVSGSRTPQPIGTLKDSLPHAYQELERVARTLERHFRDVQDMEFTIE
                     RGNLYMLQTRRAQRSGHAAVRIACDMVDEGLISEQEAVARIPPNDLNQLLHPTIDPHS
                     RLDLLTTGLPASPGAACGTAVFDADQAEKLGRAGQSVILVRRETSPEDFHGMVTARAI
                     LTARGGMTSHAAVVARGMGKPCVAGAQGLMVDEKENRFSVNGRSIGTGEWITVDGSSG
                     KVFAGQAALIAPELSGNFNRVMGWADRIMQLRVRVNADTPADAHRGRDFGAEGIGLCR
                     TEHMFFTGDRLVAMREMIVAQDTEGRQRALTKLLPMQRGDFEAIFRAMEGYPVTIRLL
                     DPPLHEFLPQEPTEIESLARELRMEVGVLKGIVDRLHEVNPMLGLRGCRLGIIYPEIT
                     AMQVRAIFEAACTVASRKGRVMPEVMIPLTASVVEFRRQALIVRQVAEEVFQERQITV
                     PYLLGTMIELPRAALTADELAREAQFFSFGTNDLTQTTWGLSRDDAGKFLPYYLEHGV
                     IEDDPFQVLDQAGVGKLIAMACDLGRRTRPDLKLGICGEHGGEPSAVAFCDRLGMNYV
                     SCSPFRVPIARLAAAQAALAARGTMDRTRATV"
     gene            4440..4934
                     /gene="purE"
                     /locus_tag="VGQ24_04850"
     CDS             4440..4934
                     /gene="purE"
                     /locus_tag="VGQ24_04850"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEV8454192.1"
                     /translation="MTEPQVGIVMGSDSDWEVMQHAARRLTEFGVNYESRVVSAHRTP
                     DLLYRYAEGAPGRGLRCIIAGAGGAAHLPGMLAAKTTIPVLGVPVPTKHLQGLDSLLS
                     IVQMPAGIPVATFAIGSAGAGNAGLYAVAILALNDPDLAERLEDFRRAQERRALDLRL
                     PELS"
     gene            4931..6064
                     /locus_tag="VGQ24_04855"
     CDS             4931..6064
                     /locus_tag="VGQ24_04855"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: protein motif:HMM:NF004679.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HEV8454193.1"
                     /translation="MILPGAAVGVLGGGQLGRMFTLQARTMGYGVVVLDPDPASPAGA
                     VANRHIQAPFDDERALSDLSASCAAITTEFENVPAAALQTLARSSLVRPPVEAVATSQ
                     DRIAEKTFLQSHGIPTAKFQAVRDLRELKTAVAALRLPALLKTSRLGYDGKGQALVVS
                     AEDAVRAFQRFGDVPCVLEERLALECELSVVLARGADGDVAPFPVAENRHHDGILETS
                     VVPARVPDAMAREARELATGLAEEMEYVGVLGVELFVANGSRLLVNEMAPRPHNSGHY
                     TLDACSTDQFEQQLRALCGLPLAQPWLLSPVAMINLLGDLWTDGEPRWEEALRRPGVR
                     LHLYGKAEARPGRKMGHLNCLATDPDRALATALETRDALRRRL"
     gene            6088..6678
                     /locus_tag="VGQ24_04860"
     CDS             6088..6678
                     /locus_tag="VGQ24_04860"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HEV8454194.1"
                     /translation="MYLAAIFALSGVLSGTSPASPTPVRSHPNAACPSRNVPVEGRKS
                     PLDSLTFQVANKPVKVCYGRPSSRGRVMLGGQDIPYGKLWRTGANEPTIFFAPIPLKV
                     AGIAVPPGTYSLYTVPGRTEWEIIVNRSISQWGKEDNYTAQVKAQELGRAKVKSESVS
                     PPIERFTIRAEPDRKNANLVLEWEKTRVKIPFQAAK"
     gene            complement(6682..>7138)
                     /locus_tag="VGQ24_04865"
     CDS             complement(6682..>7138)
                     /locus_tag="VGQ24_04865"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEV8454195.1"
                     /translation="PERLETGTLNHEGIIGASAAVDFLASLALGETRRTRLARTFAEL
                     HTRGQALVRRLWHGLSGLGGVTLYGPPPTSARTPTVAFTVEGMPADQVAERLADRAVF
                     VSSGDFYAPTVVERLGVSGGLVRAGCACYTTAEEVDRLIDGVGELSSSG"
BASE COUNT         1237 a         2323 c         2372 g         1206 t
ORIGIN      
        1 gttcggaggg gggcctggca gtggcgctgg ccgaagcggt gatcgggggt ccgtatgttc
       61 cgggcagcct gggcgcggac ctggacctga ccggctacgc gcccgatgtt ccggtggacg
      121 gcctgctcta cggcgaagac ggtgcccggg cagtagtgtc ctgtgccccc ccttcctcac
      181 ggtttctcat tgccctggcc aacgagcacg gggtcccggt atttcacgcc ggccgggtcc
      241 aaagcgctgg cgcgctggaa ctgcaggtgg ggtctcagat gttctcctgg agcacagaag
      301 cccttaggcg gatctacttt gacgcgattc cccgtcggat gcagcacccc gacgtcgatc
      361 gcgccgtggg agaatagcat gtgtggcatc atcggcgtct ccggcatttc tgacgcggcc
      421 cggctggcct atctcggact ctatgccctc caacaccgag ggcaggagag cgccgggatc
      481 gtggccattg accgggacgg gacgccgcgg tcacatcgcg gcatgggcct ggtagcggag
      541 aacttcgacg acgagctcct ggccggcttg cccggcgatg tcgcggtggg tcatacccgc
      601 tactccacaa ccggcagcac cgttctcgcc aatgcgcagc cttgcagcgt gaacacccgg
      661 tgcgggccgc tggccattgc ccacaacggc aacctcgtga atgccaacgt gatcaagcgc
      721 gagctggtcg agcgcggggc gattttcacc agctccagcg ataccgaagt gctggtccac
      781 ctcatcgcgc gctccgaggc ccacaccgcc gacgagcaga tccgggaggc gctcgagcag
      841 gtggacgggg cgtacagctt ggtgatgacg gtgggccgga ccatgtacgc ggtggtggac
      901 agccgtggct ttcgtcccct ggtcatcgga cggttcggca acgggatcgt agtggcctcg
      961 gagacctgcg ccctggatct gattggggcg tcatttcact gcgagctgcg cccgggggat
     1021 ttcgtccgga tagagaacgg ccaagtgacc catctccccc gcctagctcc ccgaccggtg
     1081 acacgatgcg tgttcgagct ggtctacttc gcgcggcccg acagcatggt gttcggtgaa
     1141 tcagtagatc gagtccggag agaactcggc cggcagctcg cacgagagca accggcgctt
     1201 ggtggcgaag tcgtcttcag cgttcccgac agctccaatg ccatggccct cggcttctcc
     1261 gaggtgtccg ggatcaagct ggagtacggg ctcatccgga accactatgt ggggcgtacg
     1321 ttcatcaatc ccacgcaggc gctccgggtg gccaaggtca agatcaagtt caaccccgtg
     1381 cgtgaggtga tccacggaaa atcggtggtg gtggtggacg acagtctggt ccgggggaac
     1441 accagcaagg agctggtcca gatgatccgg ggcgcgggcg cgcgtgaggt ccacctgcgc
     1501 ctgggttctc ccccgatcac gggtccgtgc cactacggaa tcgacacgcc cacgcgcgag
     1561 gagttgatcg gcgccagtca ttcgatcgag gagatccggc agttcctggg ggtggattcc
     1621 ctgggttacc tctccctgga cggcatgttg caggcagcgg gaaaggagac cggtttctgt
     1681 cacgcctgct tctccggcaa gtatccgacg cccacccccg acgacccgat gcgacttcgt
     1741 cacgctacgc cgctcatcgc gacgccggca tgagcggccc gtatactcag cccctcgtct
     1801 attccttcgg gcagggccgc gccgacggga ccgctgccat gaaagacatt ctcggcggca
     1861 aaggcgccgg ccttgccgag atgaccacga tcggcattcc ggttcctccc ggctttacca
     1921 tcgccagcaa tctctgcctt cactatctcg aaagtcatca attccccaag cggctccagg
     1981 cacaggtgga gaacgcgctt cagcggctcg agatcgccag cggaaagcat ttcggcgacg
     2041 gcgagaatcc gctgctggtc tcggtccgct ccggcgcagc agtctccatg cccggcatga
     2101 tggagaccat cctcaacctg ggtctcaacg acgccaccgt cgaagggttg gccaatcaga
     2161 gcggtaattc ccagttcgcc tgggattcct accgccggtt cgtgcagatg tacgggagtg
     2221 tggtgttcga tctctcccgc aagccgttcg agcaggtcct ggacgagcac aaacaacgtt
     2281 gccggatcga gcgggacatc gatctgccgg tcgaggagat gcaggcgatt gtccggcggt
     2341 tcaaggaata cgtgcgcgcc gagtccgggc gcgaattccc ggccgagccg ctcgatcagc
     2401 tgtggggggc gatcgcggcc gtcttcgaaa gctggaacac gcggcgggcc atcgactatc
     2461 gcaagctcca cgatatcccg gactcgatgg gcaccgccgt caatattgtg gcgatggtct
     2521 tcggcaacct gggcgacgat tccgggaccg gggtgacctt cagccgggat ccgtccaccg
     2581 gcgagcagcg gctctacggc gagtatctca tcaacgcgca gggcgaggac gtcgtatccg
     2641 ggagccgcac cccgcagccg atcggaaccc tgaaggacag cctcccccac gcgtaccagg
     2701 agctcgagcg ggtagctcgc acgctggagc ggcacttccg ggacgtgcag gacatggagt
     2761 tcaccatcga gcgcggcaac ctctacatgc tgcagacccg gcgggcccag cgttcgggcc
     2821 acgcggcggt gcgcattgcc tgcgacatgg tggatgaggg gctgatctcg gagcaggagg
     2881 cggtggcccg gatcccaccc aacgacctga atcaactcct ccatcccaca atcgatcccc
     2941 acagccggct cgacctcctc accaccggcc tgcccgcgtc gccgggcgcg gcatgcggta
     3001 ccgcggtgtt cgacgccgat caggccgaga agctgggccg ggccgggcag tcggtgatcc
     3061 tggtccgccg ggaaacctca cccgaggact tccatggcat ggtgacggcc agggcgattc
     3121 tcaccgcccg cggcggcatg acatcccatg ccgcggtggt ggcccgaggc atgggaaagc
     3181 cgtgcgtggc gggcgcgcag gggcttatgg tggacgagaa ggagaaccgt ttctcggtga
     3241 acggccggag catcggtacg ggggagtgga tcacggtaga cgggagcagt ggcaaggtct
     3301 tcgccggtca ggccgccctg atcgcacccg agctcagtgg caatttcaac cgggtgatgg
     3361 gctgggccga ccggatcatg cagctccgtg tccgggtaaa cgccgatacg ccggcggacg
     3421 cccaccgggg ccgggacttc ggggccgaag ggatcgggct ctgccggacc gagcacatgt
     3481 tcttcaccgg cgatcgcctg gtggccatgc gcgagatgat tgtggcgcag gatacggagg
     3541 gccggcagcg cgcgctcact aagctgcttc ccatgcagcg gggcgacttc gaagcgatct
     3601 tccgcgcgat ggagggctat ccggtcacga tccgactgct cgacccaccg ctccacgagt
     3661 tcttgcccca ggagccgacg gagatcgaga gcctggcgcg agaactgagg atggaggtcg
     3721 gagtgctcaa ggggatcgtc gaccggctgc acgaggtgaa tcccatgctc ggccttcgcg
     3781 ggtgccgcct ggggatcatc taccccgaga tcacggcgat gcaggtgcgg gcgatcttcg
     3841 aggccgcctg tacggtggcg tcccgcaagg gccgggtgat gccggaggtc atgatcccgc
     3901 tgacggcgag cgtggtcgag tttcgaaggc aggcgctcat cgttcgccag gtggcggagg
     3961 aggtctttca ggagcggcag atcaccgtgc cgtaccttct cggcaccatg atcgagctgc
     4021 cccgggccgc gctcaccgcc gacgagctcg cccgggaggc gcagttcttt tccttcggga
     4081 ccaacgatct cacccagacc acgtgggggc tttcccggga cgatgccgga aagtttctgc
     4141 cgtattacct ggagcacggt gtcattgaag acgacccgtt ccaggtactg gaccaggccg
     4201 gcgtcggcaa gctgatcgcg atggcgtgcg atctcggccg gaggacccgg cccgacctca
     4261 agctcggcat ctgcggcgag cacggcggcg agccctcggc ggtggcgttc tgcgaccgcc
     4321 tcggcatgaa ctacgtctcc tgctctccct tccgagtgcc gatcgcgcgt ctggccgcgg
     4381 cgcaggcagc gctggcggct cgaggcacga tggaccgcac ccgcgcgacc gtctgatcca
     4441 tgaccgagcc ccaggtggga attgtgatgg gaagcgattc cgactgggag gtcatgcagc
     4501 acgcggcccg gcggctgacc gagtttggag taaactacga atcccgcgtc gtttcggcgc
     4561 accggacccc ggacctgctc taccgctacg ccgaaggcgc gcccggacgc ggactccgct
     4621 gcatcattgc gggagccggc ggcgccgccc atctgcctgg catgctcgcc gcgaaaacga
     4681 ccattcccgt gctcggcgtg ccggtcccga ccaagcacct ccaggggctc gattcgctcc
     4741 tctcgatcgt gcagatgccc gccggtattc cggtggccac atttgccatc ggcagcgccg
     4801 gcgccggcaa tgccgggctt tacgccgtcg ccattctggc actcaacgat cccgatctgg
     4861 ccgagcgtct cgaggacttc cgccgcgcac aagagcgacg ggctctggac ctgagactgc
     4921 cggagctctc gtgatccttc ccggcgccgc ggtcggcgtc ctgggaggtg gccagctggg
     4981 ccggatgttc acgctgcaag cccgcactat ggggtatggc gtcgtcgtgc tcgacccgga
     5041 tccggcaagc ccggcgggcg cggtggccaa ccggcatatc caagccccct tcgacgacga
     5101 gcgagcgctc tccgacctgt cggcgagctg cgctgccatc accaccgagt tcgagaacgt
     5161 tccggccgcc gcactccaga ccctggcccg gtcgtcactg gttcgcccac ccgtcgaggc
     5221 ggtggctaca tcgcaggatc gcatcgccga aaagaccttt ctccagagcc atggcatccc
     5281 caccgccaaa ttccaggcgg ttcgggacct tcgcgagctg aagacggcag tggcagcgct
     5341 tcgcctgccg gcgttgctca agaccagccg gctcggctac gatggcaagg gacaggcgct
     5401 ggtagtgagc gcggaggacg cggtccgcgc gttccagcgt ttcggagatg tcccatgcgt
     5461 gctggaagag cgtcttgcac tggagtgcga gctttcggta gtccttgccc gcggcgccga
     5521 cggcgatgtg gcgccgtttc cagttgccga gaaccggcac cacgacggaa ttctggagac
     5581 ctcagtcgtc ccagcgcggg ttcccgacgc gatggctcgc gaagcacgag agctcgcgac
     5641 cggcctggcg gaggagatgg agtacgtcgg cgtgcttggc gtggagctgt tcgtggccaa
     5701 tggaagccgc ctgctggtca acgagatggc gccccggccg cacaacagcg gccattacac
     5761 gcttgacgcc tgctcgaccg atcagttcga gcagcagctc agagcgctat gcgggctgcc
     5821 cctggcacag ccatggctgc tctcgccggt cgcaatgatc aatctattgg gtgacctgtg
     5881 gaccgacggt gagccgcgtt gggaagaggc gctccggcgt cccggcgtcc ggctccacct
     5941 ctatggaaaa gcggaggcca ggccgggtcg caagatgggc cacctgaact gccttgccac
     6001 cgatcccgac cgcgcgctgg cgaccgcgct cgaaaccaga gatgcgctgc gccgtaggct
     6061 ttgatgatac ccatgaggag agaggcaatg tatctcgctg cgattttcgc tctgtccggg
     6121 gttctgagtg gcaccagccc cgcatcgcca acacccgtta gatctcaccc taacgcggcc
     6181 tgcccctcca gaaatgttcc cgtcgagggg cgcaagagtc cgctcgattc actgactttc
     6241 caagtcgcga ataagccggt gaaggtctgt tatggccggc cgtcctcgcg cgggcgggtc
     6301 atgctgggcg gacaggacat tccgtacggc aagctgtggc gcaccggggc caacgagccg
     6361 acgatcttct ttgcccccat tcccctcaag gtggcgggaa ttgccgtgcc gcctgggacc
     6421 tattcgctgt acactgttcc aggacgaact gagtgggaga tcatcgtcaa ccgatcgatc
     6481 tcacagtggg gcaaggaaga caactacacc gcccaagtga aggcgcagga gctgggccgc
     6541 gccaaggtga agagcgaatc ggtcagcccg ccgattgaga ggtttaccat ccgggcagag
     6601 cccgatagga aaaatgcgaa cctggtattg gagtgggaga aaacgcgggt gaagatcccg
     6661 ttccaggcgg cgaaataggt gtcatcctga ggatgacagc tcgcccaccc catcgatcag
     6721 gcgatcaacc tcttccgctg tcgtgtagca cgcgcagccg gctcgcacca atccacccga
     6781 cacccccaac cgctcgacca cggttggggc gtaaaagtcc ccgctggaaa caaagacggc
     6841 gcggtcggca aggcgctccg caacctggtc ggccggcatc ccctcgacgg taaacgcgac
     6901 cgtcggagtt cgggcggacg tggggggagg accgtagagg gtcacgccac cgagcccgga
     6961 caggccgtgc catagccgcc gtaccagagc ctgtccccgg gtatgtagct cggcaaacgt
     7021 gcgggccagc cgggtgcgcc gggtctcccc caatgcgagt gacgccagga agtccaccgc
     7081 ggcagacgct ccgatgattc cttcgtggtt caacgtgcct gtctccaacc gctcgggg
//
LOCUS       DASYRV010000190         1852 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1075442, whole genome shotgun sequence.
ACCESSION   DASYRV010000190 DASYRV010000000
VERSION     DASYRV010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1852
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1075442"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1293
                     /gene="miaB"
                     /locus_tag="VGQ24_04870"
     CDS             <1..1293
                     /gene="miaB"
                     /locus_tag="VGQ24_04870"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEV8454196.1"
                     /translation="TYGCQMNVADSELMLGVLVAQGYSPTSFPEDADVMLVNTCAVRD
                     NAEQRVIGRVGELMRYKRPGTVLGVVGCMAQRLGPLLLEKVPRVDLVVGPDAYRNLPE
                     LLNVALGGGRAADTEFRSWEHYEDVPAVRLPGPSQFVTVQRGCDYKCTFCIVPYTRGR
                     ERSRKLEEVVREVRELCESGTSEITLLGQTVNSYHDGTHDFADLLRAVGALDGIRRLR
                     FTSPYPTDFSERVIAAMAETPAVCEHVHLPAQSGSNAVLRRMLRRYTRERYLEVVARL
                     REAIPGITLSTDLIVGFPGEIDGQFEETLTLVREAAFDDAYTFRYSVREGTPAVKLHD
                     HVPEARAGERLQVLIEAVRAQARARNLARVGSVVEVLVERPAKRGTLMLGRTRGNHLV
                     LLDVPAEAIGQYHRVRLTGTTGSTFAGTLVAPELLVLT"
     gene            1290..1583
                     /locus_tag="VGQ24_04875"
     CDS             1290..1583
                     /locus_tag="VGQ24_04875"
                     /inference="COORDINATES: protein motif:HMM:NF022179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="late competence development ComFB family
                     protein"
                     /protein_id="HEV8454197.1"
                     /translation="MMIHNKIEEHAQEAYVALRSHFPDFCGCEVCHADVLVYALNRLP
                     ARYVASQEGRVITELNLDKQQNRAGIDVALMEGFRKVMASPRCKEQGKRAGTP"
     gene            1600..>1852
                     /locus_tag="VGQ24_04880"
     CDS             1600..>1852
                     /locus_tag="VGQ24_04880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454198.1"
                     /translation="MRLPPAILLVLIFEAGLATGLSRFPAPELVVLSLGCAALVLHRR
                     RLAWLPAAAAIGFTLGSVARSAAHDSCAARLPAAELRLTA"
BASE COUNT          289 a          598 c          630 g          335 t
ORIGIN      
        1 acctacggct gccagatgaa cgtggccgac agcgagctca tgctcggtgt cctcgtcgcc
       61 cagggctaca gtccgaccag cttccccgaa gatgccgacg tcatgctggt gaatacctgc
      121 gccgtgcgag acaacgccga gcagcgggtt atcggccggg tgggagagct catgcgctac
      181 aagcggcccg ggaccgtcct cggcgtcgtc ggttgcatgg cgcagcggct gggcccgctc
      241 ctgctggaga aggtgcccag ggtggatctg gtcgtcgggc ccgacgcata tcggaacctt
      301 ccggagctgc tcaacgtcgc cctcggcggc ggccgggccg ccgataccga gtttcgctcc
      361 tgggagcatt atgaggatgt tccggcggtc cggctccccg gtccctccca gttcgtcacc
      421 gtgcagcggg gttgcgatta taagtgcacg ttctgcatcg ttccgtatac ccgggggcgc
      481 gagcgaagcc gtaagctgga agaggtggtc cgcgaggtcc gggaactctg cgagagcggc
      541 accagtgaaa tcaccctctt gggtcagacc gtcaactcct atcacgacgg gacccacgat
      601 tttgccgatc tgctccgcgc cgtcggggcg ctggatggaa tccggcggct gcggtttacc
      661 agtccgtacc cgaccgattt ctccgagcgg gtcatcgcgg cgatggcgga gacgccggca
      721 gtatgcgagc acgttcacct gccggcacag agcggctcaa atgccgtgct gcgccggatg
      781 ctgcggcgct acacccggga gcgctatctc gaagtggtgg cccgcctgcg ggaagccatc
      841 cccggcatca ccttgagcac cgatctcatc gtggggttcc cgggagagat cgatgggcag
      901 ttcgaggaga cgctcaccct ggttcgcgaa gcggccttcg atgacgccta caccttccgg
      961 tattcggtcc gagagggaac tccggcggtc aagttgcatg atcatgtccc ggaagcgcgc
     1021 gccggcgagc gcttacaggt tctgatcgaa gccgtgcggg cgcaggcacg cgctcgcaac
     1081 ctggcgcggg tggggtcggt ggtcgaagtg ctggtcgagc ggcccgccaa gcgaggtacc
     1141 ctgatgctgg gccggacgcg cggcaatcat ctggtgctgc tggatgtgcc ggcggaggcg
     1201 atcggccagt atcatcgcgt caggcttacc ggcacgaccg gctcgacgtt tgcaggcacg
     1261 ctggttgctc ccgagctttt ggtcctgaca tgatgattca caacaagatc gaagagcacg
     1321 cgcaggaagc ctacgtcgcg cttcgcagcc actttccgga tttttgcggc tgcgaggtct
     1381 gccatgccga tgtgctggtg tatgcactca accggctgcc ggcccgctac gtcgccagcc
     1441 aggaaggccg cgtgatcacg gagctcaatc tcgacaagca acagaaccgc gccggtatcg
     1501 atgtggccct gatggagggc tttcgtaaag tgatggcctc accccgctgc aaagagcagg
     1561 ggaagcgggc cggtacgccg tgagtccgtg gtggagccct tgaggctccc gcccgccatt
     1621 ctgctggtcc tgatattcga ggccggtctc gcgaccggcc tctcgcgttt tccggcgccg
     1681 gagctcgtcg ttttgagcct cgggtgcgcg gccctggtcc tccaccggcg gcgactggcc
     1741 tggctgccgg cggccgcggc gatcggtttc accctgggaa gcgtggctcg aagcgccgct
     1801 cacgactcgt gcgccgcccg gctgccggcc gccgagctcc ggctcacggc cc
//
LOCUS       DASYRV010000191         7207 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_487424, whole genome shotgun sequence.
ACCESSION   DASYRV010000191 DASYRV010000000
VERSION     DASYRV010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7207
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_487424"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1672
                     /locus_tag="VGQ24_04885"
     CDS             <1..1672
                     /locus_tag="VGQ24_04885"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:NF012532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HEV8454199.1"
                     /translation="ADLRLIEDALAAGGSMSLASTLVRPVRREVESFRFSTVRLDVRE
                     NTTRLNAALADLWRRADGGADGRTDVPPEPTSDAWRQWIAGEVARPLPPGAAVPTLPP
                     ESAETLGMFQLVRDLRKEIDREAVGAFVLSMTRSVSDVLGAYLLAKTAGLYVDTAGIE
                     SCTLPIVPLFETIEDLQRAPAIMRELLSVPLVRRSVRAQSGVQEVMIGYSDSNKDGGF
                     LTSNWELSKAQIKLTRLGKELGVPIAFFHGRGGSVSRGGAPTGRAIAAQPAGSIQGRM
                     RITEQGEVVSFKYANRGTAQYQLELLAASVLEHSLKSEREKALVPTAEFDEAMEALSG
                     AAQASYRGLIDHPDLFAYYQAASPLEEISLLNLGSRPARRFGARSLSDLRAIPWVFAW
                     SQNRHFVPGWYGVGSGILTFLQVRGQRGAALLDRMFTESRLFRLIVDEVEKTLAYVDL
                     DIVHEYADLVPDAGARNRILELVEDEYHRTVEAVLRISGASQLVERYPRFRRRLARRL
                     PTINQVSRQQIELLRRFRESGGDRTQEEQLSALLLSINCIAAGFGATG"
     gene            complement(1748..2842)
                     /gene="rlmN"
                     /locus_tag="VGQ24_04890"
     CDS             complement(1748..2842)
                     /gene="rlmN"
                     /locus_tag="VGQ24_04890"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: protein motif:HMM:TIGR00048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEV8454200.1"
                     /translation="MSSSPLHTSTPAGGLLDQIPSAARDTLQRWVAARGHPAYRAGQI
                     LRRLWQAPLESWSGASDLPLALRAELEAAFPLPRLTADTIQQSTDGTRKYLWQLEDNE
                     AIESVLIPSGNRRTLCISSQAGCALGCTFCATGRMGFRRNLTPFEIAGQIREVLLRDP
                     AEKPTNIVFMGMGEPLLNWASVDTTLSILNGPEGFGIGARHITVSTVGILPGLAEFAR
                     RPEQFRLAISLHATTSAQRRSIMPIEKKYDLEAVLKAAEAFRRRVTFEFVMIGGVNDS
                     DADADRLAVLARRLGALVNILPLHPGGAPDLTPTTAPRIRAFADRLRHQGVEAVVRRS
                     RGLDINAACGQLRVEVEKKQKREKSVNSEQ"
     gene            2974..3429
                     /locus_tag="VGQ24_04895"
     CDS             2974..3429
                     /locus_tag="VGQ24_04895"
                     /inference="COORDINATES: protein motif:HMM:NF012579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEV8454201.1"
                     /translation="MLLTELLTPDRVLVPLSARDKSGVIAELTRHLINQSGGGYEEVL
                     GAVEEREAVLSTGIGFGVAIPHARSSAVSQLTLVCGVSPEPVPFDSIDGEPVRLFFLI
                     VGPESSAGQHVKILSRIARLVRRENLRERLCEARTADEFYEALLDAESR"
     gene            3426..5210
                     /gene="aspS"
                     /locus_tag="VGQ24_04900"
     CDS             3426..5210
                     /gene="aspS"
                     /locus_tag="VGQ24_04900"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: protein motif:HMM:NF001750.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEV8454202.1"
                     /translation="MSQNFGLSATTLRTQLAGGLTRADVGQRVRLGGWVHRRRDLGGL
                     VFIDLRDRAGLVQLSCNPAWTPTDVMERAAGLGAETVVLVTGTVELRPEPSRDAHLLS
                     REVEVHVTGLDIVGPAQTPPIPVARKEKEDLPAEELRLRHRVLDLRRPELQSNLMLRH
                     RLMQATRRYFDAQGFLEIETPILTKPTPEGARDYLVPSRVHPGEFFALPQSPQIYKQL
                     LMVSGYDRYFQIARCFRDEDLRADRQPEFTQIDIEASFIGLEDVLTFGEGMVQALWAE
                     AGHEVALPIERMRYADALETYGSDKPDLRYELPIFDATEVFRGADFSITRAAIEARGR
                     VRGIRVPGGAALSRKQVDEIEAAAKSLGAAGLLRLKSVGGALEGGPAKYLAPGAATRL
                     GLSDGDLCLLVAGPERVSGPALDRVRQELARRLDLIPEGENRFVWIIDFPLFERDPAT
                     GALNPVNHPFTAPHPDDIPLLDRSPEKVRALAYDMVLNGTELGGGSLRIADANLQRRI
                     FSLLGLPEEQAQRRFGFLLEGLRSGAPPHGGFAFGMDRIVMLLAGAESLRDVIAFPKT
                     TAQRALFEGAPSEVDAADLRALHLEVKE"
     gene            5335..6264
                     /locus_tag="VGQ24_04905"
     CDS             5335..6264
                     /locus_tag="VGQ24_04905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEV8454203.1"
                     /translation="MSAEGADPLLFAGVNDSNLLELQRALGVRVSFRGEAVTLSGSPD
                     QVERAGPVVAGLLDLARMGEPVTPDDVSRLAAESSLGELPPQTADGKIVLPGLRRAIV
                     PKTQGQRDYLQAISNHDIVVSIGPAGTGKTYLAVAKAVEALARKRVKRIILARPAVEA
                     GESLGFLPGDLQAKVDPYLRPLYDALEDMMPHDRVQRALETRTIEIAPLAYMRGRTLA
                     DAFIILDEAQNATGAQMKMFLTRLGVNSKTVVTGDKTQIDLPQREDSGLIQVERLLPG
                     IEGIAFCYLHESDVVRHRLVREIIRAYAEDQNG"
     gene            6264..>7207
                     /locus_tag="VGQ24_04910"
     CDS             6264..>7207
                     /locus_tag="VGQ24_04910"
                     /inference="COORDINATES: protein motif:HMM:NF019317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454204.1"
                     /translation="MPRRWNARLGESWSGASLSDRARFHLVRWAPLFAVALLTYFAFP
                     PHVGIGSPIPSTGQISRRVVISPFAFEVSKSPEEIAREGESRALTAQPVYRFSPTAYD
                     SSLAAARGFFADLERAAEVKGTDSLQKVVASRVRLGPDETQYLADSTNRRQLQEVFTH
                     FLAEGLSRGVADAGAIRGEVSRVIALRRGETERIVPRDSILTFADLMEQAEAAGTNLP
                     TAAGQRTLRRLVGAFYHPTIVLDPLVTAARREQLRGSVDPLKYSVRTGERIVRAGEPV
                     TEEARAKLITLREEHRRRGTGGLAIRSAAGALLYNALVL"
BASE COUNT         1175 a         2336 c         2448 g         1248 t
ORIGIN      
        1 tgccgacctg cggctgatcg aggacgccct tgccgccggc gggagcatgt cgctcgcctc
       61 cacgctcgta cggccggtcc gccgggaggt cgagtcattc cgattcagta ccgtgcgact
      121 cgacgtgcgg gagaacacga ccaggttaaa cgcggcgctg gcggacctct ggagacgggc
      181 ggacgggggg gcggacggac ggacggacgt accccctgaa ccgacctctg atgcctggcg
      241 acaatggatc gcgggcgagg tggcacggcc gctgccgccc ggagccgcgg tccctacctt
      301 gcctcccgag tcggccgaga cgctgggaat gtttcagctg gtgcgagacc tgcgaaagga
      361 gatcgatcgg gaggccgtgg gcgcgttcgt gctcagcatg acccggagcg tgagcgacgt
      421 actcggtgcc tacctcctgg ccaagaccgc agggctctac gtcgacaccg caggcatcga
      481 gagctgcact cttcccatcg tgccgctgtt cgagaccatc gaggacttgc agcgcgcgcc
      541 cgccatcatg cgcgagctgc tttctgttcc cctggtacgc cggagtgtcc gggcgcagag
      601 cggggtgcag gaggtgatga tcggttactc cgactccaac aaggacggcg ggttcctcac
      661 ttcgaactgg gagctcagta aggcgcagat caagctcacc cgtctgggca aggagctcgg
      721 ggtgccgatc gcgttctttc acgggcgcgg cggatcggta agccggggcg gggctccgac
      781 cggccgggcc atcgcggctc agcctgccgg atcgattcag ggccggatgc gcatcaccga
      841 acagggtgag gtggtgtcgt tcaagtacgc caaccggggg acggcgcaat atcagctcga
      901 gcttctggcc gcgagcgtgc tggagcactc gctgaagtcg gagcgggaga aagcgctggt
      961 gcccaccgcc gagttcgacg aagcgatgga ggcgctctcg ggggcggccc aggcgtcgta
     1021 ccgcggactg atcgatcacc ccgacctctt cgcgtactac caggcggcca gccccctgga
     1081 agagatttcg ctgctcaatc tgggctcacg gccggcccgc cgcttcggcg cacggtcgct
     1141 cagcgatctc cgggccattc cctgggtatt cgcctggtcg cagaaccgcc acttcgtgcc
     1201 gggctggtac ggcgtcggca gcggtatcct cacctttctg caggtgcggg gacaacgcgg
     1261 cgccgccctg ttggaccgga tgttcacgga gtcgcggctg ttccgtctga tcgtggatga
     1321 agtggagaag acgctcgcgt acgtcgatct ggacattgtg cacgagtacg ccgacctggt
     1381 gcccgacgcg ggggcgcgaa acagaattct ggagttggtc gaagacgaat atcaccgcac
     1441 cgtcgaagcc gtgctccgga tcagtggcgc gagccagctg gtcgagcgct atcctcgctt
     1501 tcgccgccgg ctggcgcgtc gcctgccaac catcaatcag gtgagccggc agcagatcga
     1561 gctgttgcgc cgattccgtg aatctggtgg ggacaggacc caggaagagc agctctcggc
     1621 gctcctgctc tcgatcaatt gcatcgcggc ggggttcggg gccaccggat agaaaagcgt
     1681 aagcgggaca agcgtgagcg gggagcggga aaggcgagtg atgggacccg gttgtcccgt
     1741 ccaccgttta ctgttcactg ttcacgcttt tctctcgttt ctgcttcttc tcaacctcga
     1801 cgcggagctg cccacacgcc gcgttgatgt cgagaccccg actccggcgg acaaccgctt
     1861 ccacaccctg gtggcgtagc cggtcggcaa aggcgcggat ccgtggggcc gtggtcgggg
     1921 ttagatccgg agcaccgcca gggtgcaacg gcaggatgtt caccagcgcg ccaagtcgtc
     1981 gcgccaggac ggccagtcga tcggcgtcgg cgtcactgtc gttcacgcct ccaatcatca
     2041 cgaactcgaa ggtcacccgc cgccggaacg cctccgcggc tttcaacacc gcctcgagat
     2101 catacttctt ctcgataggc atgatgctgc gtcgttgcgc tgaggtggtg gcgtggagcg
     2161 agatcgccag gcggaactgc tccgggcgcc tcgcgaactc ggcgaggccg ggcaggattc
     2221 ccaccgtgga tacggtgata tgccgggcac cgatcccgaa tccctcaggg ccgttgagga
     2281 tgctgagtgt ggtatccacc gacgcccagt tcaagagcgg ctcacccatc cccatgaaga
     2341 cgatgttggt cggcttctcc gccggatcgc gcagcaggac ttcgcggatc tgtccggcta
     2401 tctcgaacgg cgtcaggttg cgccggaagc ccatccggcc ggtggcgcag aacgtacagc
     2461 cgagggcaca gcctgcttga gaggaaatgc acaacgtccg ccggttccca gagggtatca
     2521 aaaccgattc gatcgcctca ttgtcctcca gctgccagag atacttccgg gtgccgtcgg
     2581 tggactgctg gatggtatcg gctgtcagac gcgggagcgg gaaggcagcc tcgagctcgg
     2641 cccgaagtgc aagcggcagg tcggaggctc cggaccagct ctcgaggggc gcctgccaca
     2701 gccggcgcag aatctgcccc gcccggtagg ccgggtggcc ccgcgccgcg acccagcgtt
     2761 gcagtgtgtc gcgagcggcc gatggtattt gatcgagcag gccgcctgcg ggcgtgctgg
     2821 tatgaagcgg ggatgaagac ataaagaaaa gtagcagtct ggtgaaggct atgaacagcc
     2881 catcgccaat agccctaaca tcaactccaa taatgcattg cctcacctcg gctcgcggta
     2941 taggtttgac gccatgcgca cccaggccac tccgtgcttc tgacagagct gctcacgccg
     3001 gaccgggtgc tggtacccct gtccgcccgc gacaagagcg gcgtgatcgc cgagctgact
     3061 cggcacctta ttaatcagtc gggtggaggc tacgaggaag tccttggggc ggtggaagag
     3121 cgagaggcgg tgttgagcac gggtatcggc ttcggtgtgg cgattccgca tgcccgatct
     3181 tccgcggtga gtcagctgac tctggtttgc ggcgtgagcc cggagccggt gccgttcgat
     3241 tcgatcgatg gcgagccggt gcggctcttt ttcctgatcg tagggcccga gtcgtctgcc
     3301 ggccagcacg tcaaaatcct gagccggatc gcgcgcctgg tgcggcgaga gaatctccga
     3361 gagcgcctgt gtgaggctcg aactgcggac gagttctacg aagctctgct cgacgccgag
     3421 tcgcggtgag ccagaacttt ggcctgagcg ccactacact gcgaacccag ctcgccgggg
     3481 ggctgacccg ggcggatgtc ggccagcgag tgcggctcgg gggctgggtt caccggcggc
     3541 gggatctcgg cggactggtg ttcatcgacc tgcgggatcg ggccgggctg gtgcagctct
     3601 cctgtaatcc cgcctggact ccgaccgacg tcatggagcg ggcggccggc cttggggccg
     3661 aaacggttgt cctggtgacc ggaacggtcg agctgcggcc ggagccctcc cgggacgctc
     3721 atctcctgtc cagggaagtc gaggttcacg tgaccggtct ggacatagtg ggtcccgccc
     3781 agaccccacc catcccggtc gcccggaagg aaaaggaaga tctccccgcc gaggagctgc
     3841 ggctgcgcca ccgagtgctc gacctccgcc ggcccgagct tcagagcaac ctgatgctgc
     3901 ggcaccggct catgcaggcc acccggcggt acttcgatgc gcagggcttc ctggagatcg
     3961 agaccccgat cctcaccaag ccgacaccgg aaggggcgag ggactacctg gtgccgagcc
     4021 gggtgcatcc aggtgagttc tttgcgcttc cgcagtcccc gcagatctac aagcagctgc
     4081 tcatggtctc ggggtatgac cggtacttcc agatcgctcg atgctttcgg gacgaggatc
     4141 tgcgggccga tcgccagccg gagttcaccc agatcgatat cgaagcctcg ttcatcggcc
     4201 tggaggatgt gctcacgttc ggcgaaggga tggtccaggc gctctgggcc gaggcggggc
     4261 acgaggtggc gctcccgatt gagcggatgc ggtatgccga tgcgctggag acctacggga
     4321 gcgacaagcc ggacctacgc tacgagcttc ccatcttcga tgcgacggag gtgtttcggg
     4381 gggccgattt ctccatcacc cgcgccgcca tcgaggcacg agggcgggta cgcggcatcc
     4441 gggttcccgg tggagcggca ctcagtcgca agcaggtgga cgagatcgag gcagcggcca
     4501 agtcgctggg cgccgccggc ctgctccggc tcaagtctgt gggcggtgcg ctcgaaggcg
     4561 gtcccgccaa gtacctcgca cccggcgcgg ccacccggct ggggctctcc gatggcgatc
     4621 tctgtctcct ggtggctgga ccagagcgtg tgtccggccc cgcgctcgac cgcgtccggc
     4681 aggagctcgc gcggcgtctc gatctcatac ccgagggtga gaaccgcttc gtctggatca
     4741 tcgactttcc tctgttcgag cgcgacccgg cgaccggagc actgaacccg gtcaaccatc
     4801 cgttcacggc cccccacccg gacgacatcc cactgctcga tcggtcgccc gagaaggtcc
     4861 gggccctggc gtacgacatg gtgctgaacg gaaccgagct cggcggaggt agtctccgga
     4921 ttgcggatgc gaacctgcag cgccgcatct tttccttgct cgggcttccc gaggagcagg
     4981 cccagcggcg attcggtttt ctgctcgagg gtctccgctc cggcgcaccc ccccatggcg
     5041 gctttgcctt cggcatggac cgcatcgtca tgctccttgc cggagccgag tcgctgcgtg
     5101 acgtcatcgc gtttccgaaa accactgcgc aacgagcgct cttcgagggg gcgccgagcg
     5161 aggtggacgc ggctgatctg cgggcgcttc acttggaggt gaaggagtga gcggtgagcg
     5221 gtgagcagtg agcggggccg ttagccgttc atccttcacg ctttgctggc tcccgcttac
     5281 cgctcaccgc tgaccgctta ccttatagcc atgcccgacg atatccagac tagaatgtca
     5341 gccgaagggg ccgacccgct gctcttcgcc ggagtgaacg acagcaatct cctcgagctc
     5401 cagcgtgccc tcggggtgcg tgtctcgttc cggggtgaag cggtcaccct gtctggctct
     5461 cccgatcagg tggagcgggc cggcccggtc gtggcggggc tactcgacct ggcccgcatg
     5521 ggtgagccgg tcaccccgga cgacgtctct cgcttggctg ccgagagcag cttgggcgag
     5581 ctgccgcccc agaccgcgga tggcaagatc gtgctgcccg gcttgcgccg tgcgatcgtg
     5641 cccaagaccc agggtcagcg ggactacctc caggccatca gcaaccacga tatcgtcgtg
     5701 agtatcggtc cggccggcac cggcaagacg tatctcgccg tggccaaggc ggtggaggcg
     5761 ctcgcccgga agcgggtcaa gcgcatcatc ctcgcccgtc cggcggtgga ggccggagaa
     5821 tcactcggct tcctgccggg agatctccag gcgaaggtcg atccgtacct gcggccgctc
     5881 tatgacgcgc tggaagacat gatgccgcac gaccgggtgc aacgcgcgct ggagacccgg
     5941 acgatcgaga tcgccccact ggcgtacatg cgcggccgca ccttggccga cgcgttcatc
     6001 atcctggacg aggcgcagaa cgcgaccggc gcgcagatga agatgtttct cacccggctc
     6061 ggggtgaaca gcaaaacggt ggtgactggc gacaagaccc agatcgacct gccccaacgg
     6121 gaggattccg ggctgattca ggtcgagcgg ctactccccg gtatcgaggg tatagctttc
     6181 tgctacctgc atgagagcga tgtcgtgcgc catcgactgg tgcgggagat catccgggcc
     6241 tacgcggagg atcagaacgg ctgatgccgc gacggtggaa cgcccgactc ggggagagct
     6301 ggtccggggc ctcgctgagc gaccgcgccc ggttccatct ggtacgctgg gccccgctgt
     6361 tcgcggtcgc cttgctgacc tatttcgcct tcccgccgca cgtgggcatc ggttcgccga
     6421 ttccctccac gggacagatc tcccggcgcg tcgtgatttc gcccttcgcc ttcgaggtgt
     6481 ccaagtctcc cgaggagatt gcccgcgagg gtgagtcgcg cgcgctcacg gctcagccgg
     6541 tctatcgttt cagtcccacg gcatacgact cctcgctcgc cgcggcccgc ggcttcttcg
     6601 ccgacctcga gcgcgccgcc gaggtcaagg gaaccgactc gctccagaag gtcgtggcgt
     6661 cgcgggtgcg tctgggcccg gacgagaccc agtatctggc cgactccacc aaccgccggc
     6721 agctccagga ggtctttacc cactttctgg ccgaaggact gtcgcgcggc gtcgcggacg
     6781 cgggagcgat cagaggtgag gtgagccggg tgatcgctct ccggcggggc gagacagagc
     6841 gcatcgtccc ccgtgattcg atcctcacct tcgccgattt gatggagcag gcagaagcgg
     6901 ccggcaccaa ccttccgacc gcggcggggc agcgcaccct gcgccgcctg gtcggcgcgt
     6961 tctatcaccc aaccatcgtg ctcgatccgc ttgttaccgc cgcccggcgt gagcaactcc
     7021 ggggcagcgt ggacccgttg aaatactcgg tccgcaccgg tgagcggatc gttcgggccg
     7081 gcgagccggt gaccgaggag gcgcgcgcga agctgatcac cctgcgcgag gagcatcgcc
     7141 ggcgcggcac cggcgggctc gcgatccgga gcgcggccgg cgcgctgctc tacaacgcgc
     7201 tcgtcct
//
LOCUS       DASYRV010000192         5165 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3154541, whole genome shotgun sequence.
ACCESSION   DASYRV010000192 DASYRV010000000
VERSION     DASYRV010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5165
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3154541"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..651)
                     /gene="tyrS"
                     /locus_tag="VGQ24_04915"
     CDS             complement(<1..651)
                     /gene="tyrS"
                     /locus_tag="VGQ24_04915"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEV8454205.1"
                     /translation="MNGLLKTLTARGLLQDATAGLDERLGRGPVTAYVGLDPTADSLH
                     VGSLVPIIGAAWLQQSGHTPIVLVGGGTGMVGDPSGKRSERPILPIEEVDRNAEAIRR
                     QVAHFLDFESSQANAARLRNNADWLRKLPLMDFLRDTGKHLTLGFMLQKESVRSRLES
                     GISYTEFSYMAIQAYDFWHLFRTEQCELQIGGSDQWGNITAGIELIGKREGRQAYGL"
     gene            723..2993
                     /locus_tag="VGQ24_04920"
     CDS             723..2993
                     /locus_tag="VGQ24_04920"
                     /inference="COORDINATES: protein motif:HMM:TIGR02074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HEV8454206.1"
                     /translation="MKRVRLSPRARRNILVGLLATLAFGLAFLAAAWSRACAGNTCPS
                     IAELGGYDPSQASKVYAADGRLITDLGLERRTVIPLGEMSPYVKAAFIATEDKRFYKH
                     HGIDWYRVFGAIRTNVFALRFAEGFSTITMQLARNIWDEDISGRDKSLRRKLREAHVA
                     LEIERKYPKDKILEIYLNQIPLGNGAYGVEAASQRYFGKSVRDLNVAEAATLAAIPKA
                     PSRYNPRRNPNLNIQRRNTVLNLLRDNDLLNAEEAERWKAYPLQLSSHSDFSGVAEYF
                     VEYVRQQLEARFGRELYTSGYRIYTSLDLDIQQAAERALEARLEAIESGADGKFLHDT
                     YRQYLESRTDNSEDNNRMTTPYLQGLVVTLEAKTGYIRAMVGGRDFEDSKFNRATQAL
                     RQPGSTFKPIVYAAAVEAGYPLSHVMVDDPLSVELDPAQPPWAPQNYDLEFDGPMTIR
                     RALYLSRNIIAIKLGMELGEQAVISEATKFGITTRVPAFPSIHIGSADVIPLEMIAAY
                     TTFANLGTRTMPNGILRVEDRSGKIIWQPPTRTVAVMDTLHAWLMTDVLRDVVRHGTA
                     VGTVGTRINFPAGGKTGTTNDGNDVWFIGFTPDMVTGVWIGFDQPKKIKANAQGGVLA
                     APAWTAMMREVYERRSIPPAWSRPPGLAALDVDKTTGYKATPFCPKDVHYIESFIPGT
                     EPTAFCPVHSPFGSMGGVMGGNGPDAAQGTGAPPTAPAVGAPTPPPPPASGGTATSGG
                     TSGVMGGTGPAPSKPR"
     gene            2995..4236
                     /locus_tag="VGQ24_04925"
     CDS             2995..4236
                     /locus_tag="VGQ24_04925"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEV8454207.1"
                     /translation="MRTRRLAARWLLPVQGPPIEHAALLTDSDGRILALGPDASVPRP
                     VDTLAEKFDDAVILPGLINTHTHLELTGFEDRVPEREFTAWIGRLRELKTTRSFAEYV
                     EAARDGLASCFACGVTTIADTGDSGAVIKALVEAGGSGIAYQEVFGPHPAQANESLER
                     LQARVDQLRPLTTDRVSIGVSPHAPYTVSGQLFRIVSDWARSEQLPVAVHVAESPAES
                     EFLLQGAGPFAEAWRARGIPLPLPGGRTPVRWLVEHGVLSEHTLCIHAVQLDGRDIGQ
                     LADSGAAVAHCPLSNRAHGHGKTPLAMLLEGGIRVGLGTDSVVSVGRLDLLAEARAAA
                     GLAPSLDADDLIELCTLSGARALGLDSHTGSLIPGKWADCTVVRIPTTTGGTPAEQVL
                     ASGPHDVLRTYVGGKEVYRSL"
     gene            4233..4676
                     /gene="argR"
                     /locus_tag="VGQ24_04930"
     CDS             4233..4676
                     /gene="argR"
                     /locus_tag="VGQ24_04930"
                     /inference="COORDINATES: protein motif:HMM:TIGR01529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006525 - arginine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HEV8454208.1"
                     /translation="MKTQRHAAILRVVRERRIESQDELREALADDGFVVTQATLSRDI
                     RELGLAKLADPQGGAYYTHPHRGTVRPELAQVLPTLLVSVDGVGPFLVLKTASGSAGA
                     VTEALDQVGWSEIIGTIAGDDTVLVITRSQRLREEIASRIQELVK"
     gene            4979..>5165
                     /locus_tag="VGQ24_04935"
     CDS             4979..>5165
                     /locus_tag="VGQ24_04935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEV8454209.1"
                     /translation="MVPLRRALRLVIEGKAEIVESDSGDVVRSERLTLPKPAIIRLVK
                     FVHVPRRFRRQVTNTFLF"
BASE COUNT          900 a         1708 c         1659 g          898 t
ORIGIN      
        1 caggccgtag gcctggcgtc cctcgcgctt cccgatcagc tcgataccgg cggtgatgtt
       61 cccccactgg tcgctgccgc cgatttgaag ctcgcactgc tcggtacgga agaggtgcca
      121 gaagtcgtag gcctggatcg ccatgtagct gaactcggtg tagctgattc cgctctcgag
      181 gcgactccgg acgctctcct tctgcagcat gaagcccagt gtgagatgct taccggtgtc
      241 acgcaggaag tccatcaggg gaagctttcg aagccagtcc gcattgttcc gaagccgcgc
      301 tgcgttcgcc tgggagctct cgaagtcgag gaagtgggca acctggcggc gtatcgcttc
      361 ggcgtttcga tcgacctcct cgatcggcaa aattggccgc tcggaccgct tcccgctggg
      421 atccccaacc atcccggtcc cgccgccaac cagaacgatc ggggtatgcc ccgactgttg
      481 cagccacgcg gctcctatga tgggaaccag actcccgacg tgaagcgaat cagcggtggg
      541 gtccaggcct acatatgccg tcaccggacc ccgcccgagc cgttcatcca ggccggcggt
      601 cgcgtcctgg agcaggccgc gggccgtcaa agttttaagc agtccgttca tagccgccaa
      661 tgctaccatc gagcctcgca atcggctagc ttgcgaacat ggccctcccg ctggatcccg
      721 cagtgaagcg cgtccggctc tcgcctcgcg ctcggcgcaa cattctggtc ggtctcctcg
      781 caacgcttgc ctttgggctg gcttttcttg cggccgcctg gagccgggcg tgcgccggca
      841 atacctgccc ctcgatcgcg gaactcggtg ggtacgaccc cagccaggcc tccaaggtct
      901 acgcggccga cggccggctg atcaccgatc tggggctcga gcgccggacg gtcatcccgc
      961 tgggggagat gtcgccgtat gtgaaggccg cgttcatcgc caccgaggac aaacggttct
     1021 acaagcacca cggtatcgac tggtaccgtg tcttcggggc gatccgcacg aacgtcttcg
     1081 ccctccgctt cgctgaaggg ttctcgacca tcacgatgca gctcgcccgg aacatctggg
     1141 acgaggacat cagcggacgt gacaagtcac tccggcgcaa gctgcgcgag gcgcacgtgg
     1201 cgctggagat cgagcggaag taccccaaag acaagattct cgagatctac ctgaatcaga
     1261 ttccgctggg aaacggcgcg tacggcgtgg aggcggcttc ccagcgctat ttcggcaagt
     1321 cggtacgtga tctcaatgtg gcggaggctg caaccctcgc cgccatcccg aaggccccct
     1381 cgcgctacaa tcctcgccgc aacccgaacc tcaacattca gcgccgcaat acggtgctga
     1441 atctgctgcg ggacaacgat ctgctgaacg ccgaggaggc agagcgctgg aaggcatacc
     1501 cgctacagct ctcctcccac tctgacttca gtggggtggc cgaatacttc gtggagtacg
     1561 tgcggcagca actcgaggcg cgcttcgggc gcgagctcta cacctccggc taccggatct
     1621 ataccagcct cgacctcgac atccagcagg ccgcggaacg ggccctggag gccaggctgg
     1681 aggcgatcga gagcggcgcg gacgggaaat tcctccacga cacctaccgc caatacttgg
     1741 agtcccggac cgacaacagc gaggacaaca accggatgac cacgccctac ctccaggggc
     1801 tggtggtcac cctcgaggcc aagactgggt acatccgggc gatggtgggc ggccgcgact
     1861 tcgaggacag caaattcaat cgcgccaccc aggccttgcg ccagccgggc tcgaccttca
     1921 agcccatcgt gtatgccgcg gcggtcgagg ccggttatcc gttatcccac gtgatggtgg
     1981 acgatccact gagcgtcgag ctcgatcccg cccagccacc gtgggccccg cagaactacg
     2041 acctcgagtt cgacgggccg atgacgatac ggcgagcgct gtatctgtcg cgcaacatca
     2101 tcgccatcaa gctcggtatg gagctgggcg agcaggcggt gatcagcgag gccaccaagt
     2161 ttggcatcac gacccgggta ccggcgtttc cctccatcca tatcggctca gcggacgtga
     2221 tcccgctcga gatgatcgcc gcctatacca ccttcgccaa tctgggcacc cgcacgatgc
     2281 ccaatggcat cctccgggtc gaagaccgca gcggcaagat catctggcag ccaccgacgc
     2341 ggaccgtcgc cgtcatggac acgcttcacg cctggcttat gaccgacgtc ctgcgggacg
     2401 tggtacggca cggtactgcc gtgggaacag ttggcacccg aatcaacttc ccagcaggcg
     2461 gaaagaccgg caccaccaac gacggcaacg acgtgtggtt cattggattc acgcctgata
     2521 tggtgacggg ggtgtggatc ggcttcgacc agccgaagaa gatcaaagcg aatgcgcaag
     2581 gcggcgtcct ggcggcgccg gcctggaccg cgatgatgcg cgaggtgtac gagcggcgaa
     2641 gcataccgcc ggcgtggtcc cggccacccg ggctcgcggc gctcgacgtc gacaagacca
     2701 ccggctacaa ggcgacgcca ttctgcccca aggacgtaca ctatatcgag tcgttcatac
     2761 cggggacgga gccgaccgcc ttctgcccgg tgcactcgcc gttcggctcc atgggtggtg
     2821 tgatgggtgg caacggccct gacgcggcgc aggggacggg cgcacctcct acggccccag
     2881 ccgtcggtgc gccgacccca ccgccaccgc cggcgagcgg cggcactgct accagcggcg
     2941 gcacctcggg agtgatgggg ggaaccggcc cggcgcccag taagccgcgc tgagatgcgg
     3001 acgcggcggc tggccgcgcg gtggctgctt cctgttcaag gtccgccgat cgagcacgcc
     3061 gcgctgctga ccgattccga tggccggatc ctggccctcg ggcctgatgc cagcgttccc
     3121 cgacccgttg acacactggc cgagaagttt gacgacgccg tcatccttcc cggcctgatc
     3181 aatacccaca cccacctgga actcaccggc ttcgaagacc gggtgcccga gcgtgagttc
     3241 accgcctgga tcggccggct gcgggagctg aagacgactc gaagcttcgc ggagtacgtc
     3301 gaggcggcgc gcgatgggct cgcatcgtgc tttgcctgcg gggtcacgac cattgccgac
     3361 acgggtgact cgggcgcggt catcaaggcg ctggtggagg ctggtggctc gggcatagcg
     3421 tatcaggagg tcttcgggcc ccatccggct caggccaacg agagcctgga gaggctccag
     3481 gcgagagtgg atcagcttcg tccgctcacc accgatcggg tgagcatcgg cgtctcgccg
     3541 cacgccccgt atacggtgag cgggcagctg ttccgcatcg tgtcggactg ggcccgctcg
     3601 gagcagttac cggtggcggt gcatgtggcg gaatcgccgg cggaatcgga gttccttctc
     3661 cagggtgccg gtccgttcgc cgaagcatgg cgcgccaggg gaatcccgct gcccttgcca
     3721 ggtggccgga caccggtacg ctggctggtg gagcacggcg tgctctccga acacacgctg
     3781 tgcattcacg cggtgcagct cgatgggcgt gatatcggtc agctggcgga ctcgggcgcg
     3841 gcggttgcgc attgcccgct gtcgaaccgg gcccatgggc atggtaagac ccccctcgcg
     3901 atgttgctcg agggtggtat ccgggtcggc ctgggaaccg actcggttgt cagcgtgggg
     3961 cggctcgact tgctggccga agcccgcgcc gctgccggtc tcgctccatc cctcgatgcg
     4021 gacgatctga tcgagctctg cacgctgagc ggtgcccgcg ccctcggcct cgactcgcat
     4081 acgggcagcc tgattcccgg gaagtgggcc gactgcaccg tcgtgcgaat tccgacgacc
     4141 accggcggga caccggccga gcaggtgctg gccagtggac cgcacgacgt tctacgcacc
     4201 tacgtgggag ggaaggaagt ctatcggtcc ctatgaagac tcaacgtcat gctgccatcc
     4261 tccgcgtcgt gcgggagcgc cggatcgaga gccaggacga gctgcgcgag gccctggccg
     4321 acgacgggtt cgtcgtgact caggcgacgc tctcccggga tatccgtgag ctgggcctgg
     4381 ccaagctggc ggacccccaa ggcggcgcgt actacacgca cccccaccgg ggcacggttc
     4441 ggccggagct ggcccaggtt ctcccgaccc tcctggtcag cgtcgatggt gtcggtccct
     4501 ttctggtgct caagaccgcc agcggatcag ccggtgcggt gaccgaggcg ctcgatcaag
     4561 tcggctggtc ggagatcatc ggcacgattg ccggagacga tacggtgctc gtgattaccc
     4621 ggagtcagcg cttgcgcgag gaaatcgcgt cgcggattca ggagctggtg aagtagatcc
     4681 cccggattca attcgagcgc tcaggtttgt ccagtggaga gctgtcaaat tgtcgcccgc
     4741 agttgtgatt tgcggactcc tccgcccgcc gtgtgatcgg cttgcccccc cacagcgggt
     4801 ttattacgat aattatcacg acttacccgg catacatcca tccggggccg cggcatggtt
     4861 ctcgccaagg gagttgagcc ccgagcgtaa ccggcggggt tggtgcatct acagattgcc
     4921 attcgggaga atgtccgtgc ggtgtctggc gttgaacgcc tccttcgagc cattgacgat
     4981 ggtcccgctg cggcgagcgc ttcgtctcgt catcgagggg aaggccgaga tcgtcgaatc
     5041 ggactccggc gacgtcgtcc gaagcgaacg actgacactg cccaaaccag ccatcatccg
     5101 cctcgtcaaa ttcgtgcatg ttccccgccg cttccgccgt caagtcacca acacattcct
     5161 tttcg
//
LOCUS       DASYRV010000193         3766 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1907277, whole genome shotgun sequence.
ACCESSION   DASYRV010000193 DASYRV010000000
VERSION     DASYRV010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3766
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1907277"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..373
                     /locus_tag="VGQ24_04940"
     CDS             <1..373
                     /locus_tag="VGQ24_04940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454210.1"
                     /translation="VLSVGEDAWISVELSIDRASAAHDLRLWIERLDGLWVTENRWSE
                     SGGVPDPLAGKSEVVAEMAPMLLGPGLYRVQAELLNGATTLATAGTVFKVVAERALTG
                     GQPALWAPTEVSCRPRVAAER"
     gene            381..1571
                     /locus_tag="VGQ24_04945"
     CDS             381..1571
                     /locus_tag="VGQ24_04945"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8454211.1"
                     /translation="MKRSRLKTLYLDANGCGAMVIKADTILRGIFGYGDGAQAPRLLR
                     RVPQVLGLFAYLRQFHAHLSYTLDWRQAFCESPALDVEVCNINNLVHYGRCLLRIKDY
                     DLVVVSHVAAGDDVTVLLRSLRWLTRRRAPLVMFIGNEYDLLDDKIGFIRAVGAELVC
                     SQLPTAAAHYLYRECGNSRILSMPHALNPKVYQPWGGSERSVDIGFIGDVYWPFVGDR
                     ERTDLIAAFERGGGRWGLRCEIRKQRVARTEWATFLTRCSGTIGAESGTYYLNDRGRL
                     LAAAREYNLLQHPEASFEEVFEKFYRGQPREVSGKSISSRHFEPIGTKTCQLLVDGEY
                     NGILKPDVHYISIRKDLSNIDEAVRRFRDEAYRRVMVDEAYEYVMAEHTYDQRVRTLL
                     GTIG"
     gene            1592..2623
                     /locus_tag="VGQ24_04950"
     CDS             1592..2623
                     /locus_tag="VGQ24_04950"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEV8454212.1"
                     /translation="MMLPEALCCLVHREELVVDGGTRRVDATTRTLACPRGCRIPVRD
                     GIPRFVSSESYAAAFGRQWNSFRRTQMDSFTGRPISRERLERCLGGSLDVVKDRTVLE
                     AGCGAGRFTEQLLAAGAQVFACDLSSAVEANRENCAGRERYFVCQADLLRLPVRPGYF
                     DFVICLGVIQHTPDPEEAISRLATYVKPEGCLVVDHYRYGAKDMTRVRQWLRSVLLRT
                     PSRWSLALVRGMVAALWPLHRALWWHRHRPWIAACRRRWLQYSPVLDYHDSYGTLPAS
                     VLYAWAALDTHDALTDVYKHKRTADEIRSVLQRCGLVGIEVSYGGNGVEARARRPARS
                     AGGTVCAGA"
     gene            2627..>3766
                     /gene="asnB"
                     /locus_tag="VGQ24_04955"
     CDS             2627..>3766
                     /gene="asnB"
                     /locus_tag="VGQ24_04955"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HEV8454213.1"
                     /translation="MCGIAGIVHFHPESRANEALVRRMTELLAHRGPDDTGIYASGPV
                     SLGHRRLSIIDLSAGGHQPMANETGSVWITYNGECYNHRDFVAGLQTRGHRFRSTSDT
                     ETLLALYEEQKPEFLSRIDGMFALAIWDARRRRLLLARDRLGIKPLFYYHDREHLVFA
                     SELKALLADRSVPSEISDVALADFLHLMSIPDPEGIFRGVRKLLPGHYLVVEDGRVRE
                     EAYWEVPMMEPAREVGLAVASQEFEAMFRRAVTSHLLADVPVGAFLSGGVDSGAVVAM
                     AAGNSAKPMMSFASTFRGLSEFDESPYARQVAALYGTEHHEFDLTPNLVEALPRIVWH
                     ADEPFAISSALPLYFLAQLARQHVKVVLTGDGGDEVFAGYTWRHVD"
BASE COUNT          618 a         1162 c         1321 g          665 t
ORIGIN      
        1 cgtcctgagc gtcggcgagg acgcatggat cagcgtggag ctgagcattg accgggcatc
       61 agccgcgcat gacctccggc tctggatcga gcggctggac ggtttgtggg tcaccgagaa
      121 tcgctggtcg gagtcgggtg gtgtcccgga tccgctggcc gggaagtccg aggtggtggc
      181 cgagatggca ccgatgttac tcgggcccgg cctctaccgg gtccaggccg agctactgaa
      241 tggcgcgacg acgctggcaa ctgccgggac ggtgttcaag gtggttgccg agcgcgccct
      301 gaccggaggg cagccggcac tgtgggcgcc cacagaggta tcgtgccggc cgagagtcgc
      361 ggccgagcga tgagagcatc gtgaagcgca gccgcctcaa gacgctctac ctcgacgcca
      421 atggttgtgg cgcgatggtg atcaaggccg acacgattct tcgcggcatc ttcggatacg
      481 gtgacggcgc gcaggccccg cgactgctgc gccgcgtccc ccaggtcctc ggtctcttcg
      541 cctacctgcg gcagttccac gcgcacctgt catacacgct cgactggcgc caggctttct
      601 gcgagtcgcc ggcgctggac gtggaagtct gcaacatcaa caacctggtg cactacggcc
      661 ggtgcctgct gcggatcaag gactacgatc tcgtcgtcgt gtcgcacgtg gcagccggtg
      721 acgatgtgac ggtcctgctg cggagcctgc gctggctcac gcgccggcgc gccccgctgg
      781 tcatgttcat cggcaatgag tacgacctgc tcgacgacaa gatcggcttc atccgggcgg
      841 tcggggcgga gttggtctgc agtcagctgc cgacggcggc cgcccattac ctgtaccggg
      901 agtgcggtaa cagccggatc ctgtcgatgc cccacgcgct gaacccgaag gtctaccagc
      961 cctggggggg ctccgagcga tccgtggaca tcggcttcat cggcgatgtg tactggccgt
     1021 tcgtcggcga ccgggagcgc accgacctca tcgcggcgtt cgagagagga ggtggccgct
     1081 gggggctccg gtgcgagatc cggaagcagc gagtggcccg gacggagtgg gccacgttcc
     1141 tgacccggtg cagcgggacg atcggggccg agtccggcac atactacctg aacgaccggg
     1201 ggcgtctgct ggcggcggcg cgcgaataca acctgctcca gcatccggag gcctccttcg
     1261 aggaggtctt cgagaagttc taccgcggcc agccgcggga ggtgtcggga aagagcatct
     1321 cgtcgcggca cttcgagccc atcgggacga agacgtgcca gcttctagtc gacggagagt
     1381 acaacggaat cctcaaaccg gacgttcatt acatcagcat caggaaggac ctgtccaaca
     1441 tcgacgaggc cgtacggcgg tttcgagacg aggcctaccg ccgggtgatg gttgatgagg
     1501 cctatgagta cgtgatggcc gagcacacgt acgaccagcg ggtccgaact ctcctgggaa
     1561 ccatcgggtg agggcgacga tggaaggcgg catgatgttg cccgaggcat tgtgttgcct
     1621 cgtccaccga gaagagctgg tggtggatgg cggcactcgg cgagtcgacg ctaccacacg
     1681 gacgctggca tgtcctcgag gatgcaggat cccggttcgc gacgggatcc cgcgcttcgt
     1741 gagctcggag agctatgcgg cggccttcgg caggcagtgg aactcctttc gccgcactca
     1801 gatggattcg ttcaccggcc ggccgatctc gcgtgagcgg ctggagcggt gtctcggtgg
     1861 atccctggac gtggtgaagg atcggaccgt gctcgaggct ggctgcggtg ccgggcggtt
     1921 cacggagcag ctgcttgccg cgggcgctca ggtcttcgcc tgcgatctat cgagcgcggt
     1981 ggaggcaaac cgcgaaaact gcgcggggag agagaggtac tttgtctgtc aggctgacct
     2041 gctccggctt ccggtccgac ccgggtattt cgacttcgtg atttgccttg gggtcatcca
     2101 gcatacgccc gacccggagg aggccatcag caggctggcg acctacgtga agccggaagg
     2161 ctgcctcgtg gtcgatcact atcggtacgg ggcgaaagac atgactcgtg tccggcagtg
     2221 gcttcgaagc gtcctcttga gaacgccatc ccgatggtcg ctggccctgg tgcgcggcat
     2281 ggtggctgcg ctgtggcccc tgcatcgggc gttgtggtgg catcggcatc gtccctggat
     2341 agctgcgtgc cgaaggcgtt ggctgcaata ctcgccggta ctcgattatc acgatagcta
     2401 cggaacgctt ccggcaagcg tgctatacgc ttgggccgca ctcgacaccc acgacgccct
     2461 caccgacgtg tacaagcaca agcggaccgc ggatgagatc aggagcgttc tgcagcggtg
     2521 cggcctggtg gggatcgagg tgagctacgg aggtaacggc gtggaggcac gcgcgcgaag
     2581 accagcccga tcggcgggcg gcacagtgtg cgcgggggcg tagggcatgt gcggcatcgc
     2641 ggggattgtc catttccatc cggagtcgcg ggcgaacgaa gcgctggttc ggcggatgac
     2701 cgagctgctg gcgcatcgag gacccgacga caccgggatc tatgcatccg gcccggtcag
     2761 ccttggtcac cggcgactgt ccatcatcga cctgtcggcg ggcgggcacc agccgatggc
     2821 gaacgagacc ggcagcgtct ggatcacgta caacggggag tgctacaacc accgcgactt
     2881 cgtcgccggc ctccagactc gtggccatcg cttccgatcg acatcggaca ccgaaaccct
     2941 cctcgccctc tacgaggagc aaaagcccga gttcctgagc cggatcgacg gcatgttcgc
     3001 gctggccatc tgggacgccc ggcgccggcg cctgctcctg gcgcgggacc ggctgggcat
     3061 caagccgctc ttctactacc acgaccggga gcatctggtg ttcgcctcgg agctcaaggc
     3121 cctgctcgcc gatcgcagcg tcccctccga gatcagcgac gtggccctcg cggatttcct
     3181 ccatctgatg agcatcccgg atccggaggg gatctttcgc ggcgtgcgga agctccttcc
     3241 cgggcactac ctggtggtcg aggacggacg ggttcgggag gaggcgtact gggaggtccc
     3301 gatgatggag ccggcccgag aggtcggcct cgccgtcgcc agtcaggagt tcgaggcgat
     3361 gtttcgccgg gcggtgacgt cacacttgct ggcggacgtt ccggtcggag ctttcctgag
     3421 cggaggtgtg gactccggcg cggtggtggc gatggcggcc gggaattccg ctaagcccat
     3481 gatgtccttt gccagcacct tccgggggct ctcggaattc gacgagagcc cgtatgcgcg
     3541 gcaggtggcc gcgctgtacg ggactgagca ccatgagttc gacctcaccc cgaatctggt
     3601 cgaggcgttg ccgcggatcg tctggcatgc ggacgaaccg ttcgcgattt cctccgcgct
     3661 gcctctctac ttcctcgccc agctcgcccg gcagcacgtg aaagtcgtgc tcaccggcga
     3721 cgggggcgac gaggtcttcg caggctatac gtggcggcac gtggac
//
LOCUS       DASYRV010000194         3228 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1076267, whole genome shotgun sequence.
ACCESSION   DASYRV010000194 DASYRV010000000
VERSION     DASYRV010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3228
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1076267"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..447)
                     /locus_tag="VGQ24_04960"
     CDS             complement(<1..447)
                     /locus_tag="VGQ24_04960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454214.1"
                     /translation="MMLVRLRVPVSFSISLATFATACAAPNPPEVIPASLYQPVRRDS
                     TDQPSPRWWTAIPDAVSRAAAMPVLSSVALLPGARELRMTAAVSGMIWQPVPLLRLVE
                     WHDGVAGELYLYWHRLRDSTGREPSPGWVARRRSGCREVRQTSGWAT"
     gene            complement(444..947)
                     /locus_tag="VGQ24_04965"
     CDS             complement(444..947)
                     /locus_tag="VGQ24_04965"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEV8454215.1"
                     /translation="MSIVHTLLSQLDFEMATTRRVLEVVPEADAAWKPHPKSSSLGDL
                     ATHIVLLPLWGKLVVQQPELDLGLPANRAIASMPFTTVRELLDRFDTHVRDQRSALES
                     SSDTAMRESWALKNRGTTVFSLPRVAAMRGFILSHMIHHRGQLTVYLRLRDVPVPSVY
                     GPTADTR"
     gene            1123..1809
                     /locus_tag="VGQ24_04970"
     CDS             1123..1809
                     /locus_tag="VGQ24_04970"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEV8454216.1"
                     /translation="MRIGIIGAGQIGGTLARRLTALGHDVSIANSRGPQSLAALASET
                     GARPVTVEQAAQAGDVVIVTIPMKSIPRLPAHLFDGVPDETVVVDTGNYYPQQRDGRI
                     DPIERGTSESRWVSERLGRPVVKAFNNIYARHLLERGKSRGAAGRIALPVAGDEKRAK
                     DVVIRLLDELGFDGVDAGSLDESWRQQPGTPVYGTDLDVAGVRKALAEAKPERMRAFR
                     AEEERPAGRR"
     gene            complement(1848..2339)
                     /locus_tag="VGQ24_04975"
     CDS             complement(1848..2339)
                     /locus_tag="VGQ24_04975"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEV8454217.1"
                     /translation="MASRLAHSVFIWGGAALLFLHPRRSRLLLYPLLPRSVWIVWGGV
                     VLVALGLGFSAWARAHLGRFWSGTVTLKAEHVLIRTGPYAWTRHPIYTGLLLALIGTA
                     LVRGTLAAFAGLVLLVAGVMLKIRQEERLLSEHFGASYRAYQAEVPAVVPRLRSGSNR
                     TIA"
     gene            complement(2508..>3228)
                     /locus_tag="VGQ24_04980"
     CDS             complement(2508..>3228)
                     /locus_tag="VGQ24_04980"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEV8454218.1"
                     /translation="RGYGQSGCPVSTPDHVPYSKRAMAQDMVTVMERLGFPRFSVAGH
                     DRGGRVAYRMALDHPDRVHRLAVLDIVPTDTAWDRADARFALAFWPWSLLAQPEPLPE
                     CILAAAAEAIVDDALGGWGSPSAVFSREVRAAYVQALRDPGHAHAVCEEYRAAATIDR
                     EHDRADQAGSRRIACPVLALWSALGPLGTWYAEEGGPIALWRAWSDDVQGHSLSAGHF
                     FPEEAPESTAEALNRFFGTPG"
BASE COUNT          614 a         1045 c         1129 g          440 t
ORIGIN      
        1 ggtcgcccaa ccggaggtct ggcgcacctc gcgacagccc gagcggcgcc gcgcgaccca
       61 ccctggagac ggctctcgcc cagtggagtc acgcagacga tgccaataca agtacagctc
      121 accggcgacg ccatcgtgcc attcgacaag gcgcagcaat gggacaggct gccagatcat
      181 cccgctcacc gcggcggtca tccgaagctc ccgcgctccc ggcaggagcg ccacagagct
      241 caggaccggc atggcggcgg cacgggacac tgcgtccggg atcgccgtcc accagcgcgg
      301 tgacggctgg tccgtcgagt cgcggcgcac cggctggtac aggctcgcgg gtatgacctc
      361 gggaggattc ggtgcagcgc acgctgtcgc gaaggttgcc agggagatgc tgaaagagac
      421 cggcacccga aggcgcacga gcatcatcgc gtgtcggccg tgggcccgta gaccgacggg
      481 accggcacgt cgcgcaaccg gaggtacacg gtgagctggc cccggtggtg gatcatatgg
      541 ctcaggatga agccgcgcat cgccgcgacc cgcgggagcg agaacaccgt cgttccccga
      601 ttcttgagcg cccagctctc gcgcatggcg gtgtccgagc tcgactccag tgcgctgcgt
      661 tggtcgcgca cgtgagtatc aaagcgatcg agcagctctc tcacggtggt gaagggcata
      721 ctggcaatgg ccctgttggc cgggaggccg aggtccagct ccggctgctg cacgacgagc
      781 ttgccccaga gggggagcag gacgatgtga gtggcgaggt cccccaggga agacgatttg
      841 ggatgcggct tccacgcggc gtcggcttcg ggcacgacct cgaggactcg ccgcgtcgtg
      901 gccatctcaa agtcgagttg ggagagcagg gtatgaacga tcgacatcga ggtctccggg
      961 gcagcggggc agcgcggcgg cgacaggaag gcagggtcac ccacgaccag ttggaaccac
     1021 agccccgccg ccgcggttgt cgtctcaagg ttagactcac ctaggggccc ggggtacccc
     1081 ctgggtagct cgagttaggc gcgaatcaat caaggagcag acatgagaat cggcatcatc
     1141 ggcgcgggtc agatcggcgg cacgctggct cgccgcctca ccgcgctggg gcacgacgta
     1201 tccatcgcca actcccgggg accccagtcc ctggccgcgc tggcgagcga gaccggcgcc
     1261 aggccggtca cggtcgaaca ggccgcccag gccggtgacg tagttatcgt caccatcccg
     1321 atgaagagca tcccccgcct cccggcccat ctattcgacg gcgtgcccga cgagaccgtc
     1381 gtggtggaca ccggcaacta ctacccccag cagcgcgatg ggcggatcga cccgatcgag
     1441 cgcggcacca gcgagagccg atgggtatcc gagcggctcg gccgtcccgt ggtcaaggcg
     1501 ttcaacaaca tctacgcgcg ccacctcttg gagcgcggca agtcgagggg cgccgccggg
     1561 cgtatcgcgc tgccggtagc cggggacgag aagcgtgcga aggacgttgt catccggctg
     1621 ctcgacgagc tcgggttcga cggggtggat gcggggagcc tggacgagtc ctggcggcag
     1681 cagccaggga cgccggtata cggcacggac ctcgacgtcg cgggcgttcg gaaagcattg
     1741 gcggaggcga agccagagcg gatgcgcgcg ttccgggcag aggaagaacg ccccgccggc
     1801 cggcgctagt ggtttgcggg aaaggcgata agaggcgccc atcagcctca agcgattgtc
     1861 cggttgctgc ccgaccggag gcgaggaacc accgccggca cctccgcttg ataggcgcgg
     1921 tagctggcgc caaagtgttc gctcagaagt cgctcttcct gtcggatctt gagcatcacc
     1981 cctgccacca acagaacgag gcccgcgaaa gcagccagtg tgccccgcac caaggcggtg
     2041 ccgatcaggg ccagcaagag accggtgtag atcggatgcc tggtccatgc gtaggggcca
     2101 gtgcgaatga ggacatgctc tgccttgagg gtgacagtcc cactccagaa ccggcccagg
     2161 tgcgcgcgag cccaggcgct gaagccgagg cccagcgcca ccaagacgac gcctccccaa
     2221 acgatccaca cgctacgcgg gaggagaggg tagaggagaa ggcgggaccg gcgggggtgg
     2281 agaaagagaa gggcggcccc gccccagatg aagaccgagt gggcgaggcg cgaagccatg
     2341 gattggcgag cgaccgtcct cgcggtcgac cgcgcagcaa gcaaccaccc gagcagccat
     2401 gccgcccaga gggccgagag gcaagtcgtg ggcgagatca tgcttcgaaa gcttcggagg
     2461 caatagccgc tggcgcaagg aggtcgagtc tgatgccgcc gatcggctca tcccggggtg
     2521 ccgaagaagc ggttgagcgc ttcggcggtt gattcgggag cctcttccgg gaaaaaatgg
     2581 ccggcactga gcgagtgtcc ctgaacatcg tcgctccatg ctcgccatag cgcgattggc
     2641 ccgccctcct cggcatacca ggtgccaagt ggcccaagag cgctccacag tgccagcacc
     2701 gggcaggcaa tccggcgact gcccgcctga tccgccctgt catgctcgcg gtcgatcgtt
     2761 gcggcggccc ggtattcctc acagacagca tgggcgtggc caggatctcg aagagcctgt
     2821 acataggccg cgcgaacctc ccgagagaac accgccgaag gggagcccca tccgccgagc
     2881 gcatcgtcga caatggcttc agcggcggcc gccaggatgc attccggaag cggttcaggc
     2941 tgggcgagta acgaccaggg ccagaaggcc agcgcgaacc tggcatcggc gcggtcccat
     3001 gccgtgtccg tcggcacgat gtcgagcacg gcaagccggt gcacacgatc gggatggtcg
     3061 agagccatgc gataggcgac gcgaccgcca cgatcgtgcc cggcgaccga gaaacgggga
     3121 aatccgagcc gctccattac ggtcaccatg tcctgcgcca tggcccgctt cgagtatggc
     3181 acatggtccg gagtggagac cgggcagccg ctctgcccgt agccgcga
//
LOCUS       DASYRV010000195         3162 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2151128, whole genome shotgun sequence.
ACCESSION   DASYRV010000195 DASYRV010000000
VERSION     DASYRV010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3162
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2151128"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            514..1308
                     /locus_tag="VGQ24_04985"
     CDS             514..1308
                     /locus_tag="VGQ24_04985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEV8454219.1"
                     /translation="MRRNWIPLSVSAIAHLLLIAVAVSLSRRSAAVTPERSTDATEPA
                     RHVDMIYVPPVQPARPSPPRRPATPPPAKSQKEPEPEPNAPPEATRTSGNDSDDPSPA
                     TGEAPDGAARRKEAPAELATATLESEARRIFGRPRLRTAPGAGPQATRPMEAYLPENP
                     ERCVPHPAPQSDSAAAPTFGTVVGRIFRQDGGRPLAGAHLQMLGAPYTAFTDDNGEYR
                     FRFDLALVDNCRTQYVRVTAPGYETRLLVLLMGENIRSEDVRLRRR"
     gene            complement(1294..2559)
                     /locus_tag="VGQ24_04990"
     CDS             complement(1294..2559)
                     /locus_tag="VGQ24_04990"
                     /inference="COORDINATES: protein motif:HMM:NF012234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEV8454220.1"
                     /translation="MRKAVRSIQSGGAVFKVERSEEREAGEPAPEYAGGRPEAQTGYN
                     FCMADSIRDLFFGAVSPGRELVEAIEPRRSFDDVVLPAMTMRALNHALALVRKHDLIF
                     HQWGLAERHSTGLGLAFHFAGPPGTGKTICAEALAYALNQKLLVVRYAELESRWVGQT
                     SKHVASVFRAAAREDAVLFFDEADAIAGRRFTTMGAAYEREANAIVNVLLHELESFPG
                     VVIFATNLAANIDPAFERRIRTHILFTMPDVDERERIWQVQLHARKTPLAEDVDFRAL
                     AEKYPRSGGDIKNAVLKGAQIATVEPGPDSGKRIHQRHFVQGMEEVIAGESVMSQSLF
                     DDPSALSGGSVMDRLVESQEELRGELALLAERVDGLAADPSTSARLIASFTTARKRRD
                     LILAALALAAMALAIAALAAALLGGSASP"
     gene            2537..>3162
                     /locus_tag="VGQ24_04995"
     CDS             2537..>3162
                     /locus_tag="VGQ24_04995"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEV8454221.1"
                     /translation="MLRTAFRTVGSVAPGVAARWAETIFCRPPRNEPRPSEEVFLATG
                     ARLTVRSEDQDLAVWTWGDGPVVVLAHGWGGRAGRFSSIAGALVEAGFRVVLFDAPAH
                     GASMGRQASLPQFSRALGKVGAAVGPVYGLIGHSLGGAAVSLAIGQGLAARRAVLLAS
                     PADVTVFSHAFAEHLRIPPRARDVMQHNLETRLQIRWEELHIPTLAKVL"
BASE COUNT          530 a         1043 c         1088 g          501 t
ORIGIN      
        1 ctgcaggcag gagctcccac ctccgcacaa aagaacgcag tgcttcggtg ggacatcctg
       61 cccgcagcaa ccccgcccgg tggagagagc ttagggactg gcggcggcgg aactgggcgg
      121 agccccgaag gctggttcgc ccccctgccc cggtaggaga gcgcttaggg actggcggcg
      181 gcggaactgg gctgagcccc gagggctgag tgtcaggggc ggtggggtgc cgggtcgtac
      241 actcgaagcc ggaggggctc ggcccagtga gcaggccgcc agcagtgcgg gctgagcccc
      301 ggaggctggt tcgcccggca gtgcttcggt gggacatcct gcccgcagca acccgccccg
      361 acaggagaga gcttagggac tggcggcggc ggaactgggc ggagccccga gggctgagtg
      421 tcagaggcgg tggggtgcgc tggaaatggg agcgggggcg gcttcacgac gggctatctt
      481 gagcattggc tcaggacctt ttcaaggaac acggtgcggc gaaactggat cccgctgtcg
      541 gtcagtgcca tagcacacct gctgctcatc gcggtcgcgg tgtcgctgtc gcgcaggtcg
      601 gccgcggtga cgccggagcg ctccaccgat gccaccgaac cggcccgaca cgtggatatg
      661 atctacgtgc cgccggtcca gcctgctcgc ccatcgcctc cccgaagacc cgcgactcct
      721 ccaccggcca agtcgcagaa ggagcccgag ccggagccga acgcgccacc ggaggccact
      781 cgcacctcgg gaaacgactc ggatgatccc agtccggcca ccggcgaggc accagatggg
      841 gctgcgcgcc ggaaggaagc gccggcggaa cttgctaccg caacgctcga atcggaggcc
      901 cggcgcatct ttggccggcc acggctccga acggcgccgg gagcgggccc gcaggccact
      961 cgcccgatgg aagcctacct acccgagaat cccgagcgat gcgtgcctca tccagcgccg
     1021 cagagcgatt cagcagctgc accgacattc gggacggtgg tcggccggat cttcagacag
     1081 gacggtgggc ggcccctggc cggggcgcac ctccagatgc ttggcgcacc ctatacggca
     1141 ttcaccgacg acaatggtga gtatcgtttt cggttcgatc tggcgctggt ggacaactgc
     1201 cgaacccagt acgtccgggt gaccgccccg ggatacgaga cccgcctcct ggtcctgctg
     1261 atgggggaga acatccggag cgaggacgtg cgattacggc gacgctgagc ctcccaagag
     1321 agcggccgcc agcgctgcaa tcgccaacgc catggcggca agcgccagag ccgccagaat
     1381 gagatccctg cgcttgcggg cggtcgtgaa cgacgcaatg agacgggccg acgtggatgg
     1441 gtcggccgcg agtccatcca cccgctccgc cagcagtgcc agctcgcccc gcagctcttc
     1501 ctgactctct accaggcgat ccatcacgct tccgccgctc agggcagaag ggtcgtcgaa
     1561 gagagactgc gacatgaccg attcgccggc aatgacctcc tccatgcctt gcacgaagtg
     1621 tcgctggtga atccgcttgc cggaatcagg gccgggttcc accgtggcga tctgggctcc
     1681 cttcagcacc gcgttcttga tatcgccacc gctccggggg tacttctcgg ccagcgcccg
     1741 gaaatccacg tcctctgcca gcggggtctt gcgggcatgg agctgcacct gccagatccg
     1801 ctcgcgctcg tcgacgtccg gcatggtgaa gaggatgtgc gtgcggattc gccgctcgaa
     1861 ggccggatcg atgttggcgg cgaggttggt ggcaaagatg acgacgccgg ggaacgattc
     1921 cagctcgtgg aggagcacgt tcacgattgc gttggcctcg cgctcgtacg ccgcgcccat
     1981 cgtcgtaaac cgccggcctg cgatggcgtc cgcctcgtcg aagaagagca ccgcgtcctc
     2041 acgagcggcc gcccggaaca ccgaggccac gtgctttgac gtctgcccca cccagcggga
     2101 ctcgagctcg gcatagcgaa ccaccaggag cttttggttc agggcgtagg cgagcgcctc
     2161 cgcgcagatg gttttgccgg tgccgggcgg ccccgcaaag tggaaggcca gtccgagccc
     2221 cgtcgagtgc cgctcggcaa gaccccactg gtgaaagatc aggtcgtgct ttcggaccag
     2281 ggcgagcgca tggttgagcg ctcgcatggt catggccggc aggaccacgt catcgaagga
     2341 gcgtcggggc tcgatagcct cgaccagctc gcgcccgggc gaaactgcgc cgaagaagag
     2401 atcgcgaatc gaatcggcca tacagaaatt atagcccgtt tgcgcctcgg gacgacctcc
     2461 agcatactcc ggagccggct cgccggcctc tctttcttcg gagcgctcca ccttgaagac
     2521 cgcgcctcca ctctggatgc tgcgtaccgc ctttcgcacc gtcggctcgg tggcgccggg
     2581 tgtggctgcc cgctgggccg agaccatctt ctgccgccca ccacggaacg agccaagacc
     2641 gtccgaggag gtgtttctcg ccaccggagc gcgactcacc gtccggagcg aggaccagga
     2701 tctggccgtg tggacctggg gagacgggcc ggtcgttgtg ctggcccatg gctggggtgg
     2761 gcgggcaggc cgcttcagct cgattgcggg agcgttggtc gaggccggct tccgagtggt
     2821 gctgttcgat gcgccggccc acggcgcctc catggggcgg caggcctcgc ttccgcagtt
     2881 ttcccgagcg ctgggcaaag tgggagctgc cgtgggaccg gtttacgggc tgataggcca
     2941 ctccttagga ggggcggcgg tatcgctcgc tatcgggcag ggcctagcgg cacgacgggc
     3001 ggtgcttctg gcctccccgg cggatgtcac agtgttctct catgcgtttg cagaacatct
     3061 tagaattccg ccccgcgcac gcgacgtcat gcagcacaac ctggagaccc ggcttcagat
     3121 ccgttgggag gagctgcaca tccccacgct ggcgaaggtt ct
//
LOCUS       DASYRV010000196         2586 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3605037, whole genome shotgun sequence.
ACCESSION   DASYRV010000196 DASYRV010000000
VERSION     DASYRV010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2586
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3605037"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(514..1845)
                     /locus_tag="VGQ24_05000"
     CDS             complement(514..1845)
                     /locus_tag="VGQ24_05000"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEV8454222.1"
                     /translation="MEQEAPIRRRVALKLIKPGMDSAQVLARFESERQALALMSHTGV
                     AKVFDAGLTPNGRPYFVMEHVAGLPITDYCDKRRLNLRERLGLFVQTCEAIHHAHQKG
                     IIHRDVKPSNILVAEQDGRPLAKVIDFGVAKAISQRLTARTLFTQQGVMVGTPEYMSP
                     EQAGVTALDVDERADVYSLGVVLYELLMGARPFALREMGEAGALEMLHVIREADPPTP
                     ERRLSALDAKAEEIAWRRQTDVRSLSRALRGELAWITMRTLEKQPARRYASVSELAAD
                     VGRYLAGEPVTARPPTARYRMAKWIRRRRAFVASATAIALLLVAGAVATGILHWRAQR
                     AREKVLRVVLEDVVATRNYSGLAGLSESDLGRLHRKIEADPRGEIARLAYRAAAHVGV
                     DVPAFGLISEPPQVYLLFGGIPAMLVVPDSSKVLWHAEVDASWDGEPAPLC"
     gene            1837..1989
                     /locus_tag="VGQ24_05005"
     CDS             1837..1989
                     /locus_tag="VGQ24_05005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454223.1"
                     /translation="MLHEVHRPHATFAEQLEDLIGADALVDPGLRLRDCRLGARAILI
                     VQPKRR"
BASE COUNT          452 a          882 c          780 g          472 t
ORIGIN      
        1 agtacaaagt cgggcttgcg agctgcggaa tcggtcaaaa tgttgcactc aatttcgcta
       61 gaccgcttaa ctcgaagccg acgatcaggc cgcggggcgg caggtctgca ggaggaaggc
      121 acacggtctc gacttgtgcg ggctcggcgc cgagccacgg aaagagaatg cacttcccgg
      181 cccgcggagg gaggctcacg gtcacgagcc gtaccgcatc gacgtggaac aagctctcgg
      241 caggctcgtc gagggtcacc gcatgcggga agtccggtgg gaagctggag aagaggctga
      301 ctgggaaaac gcccaactcg cgcgtctcgt gatcaagagg agcgttcgcc gtcagggcgt
      361 cacgctcaga gccggcggac cccagatagc tcgtaatcgt ggcgcgaagg ctcagccgat
      421 gtggacctgc ggccagtgag accgatccca ggagctctcg caggttagtc cccgcgctgt
      481 tgatctctaa tgatctgctg tcccacgact ttttcagcag aggggtgctg gctctccgtc
      541 ccaggaggca tcgacctcgg cgtgccacag gaccttcgat gagtcgggga caactaacat
      601 cgccgggata cccccgaaca acagataaac ttgcggcggc tctgagatca gcccgaacgc
      661 cggaacgtcg accccgacat gggcggccgc gcggtaggcc agcctggcga tctcgccgcg
      721 gggatcggcc tcgatcttcc ggtgaaggcg ccccaggtcg gactcgctca atccagccag
      781 cccggagtag ttcctcgtgg cgaccacgtc ttccagaacg acgcggagca ccttctctcg
      841 cgcccgctgg gccctccagt gcaggattcc cgtggccacc gcgcctgcca cgagcagaag
      901 cgcgatggct gtcgccgagg cgacgaatgc ccggcgccgg cggatccatt tggccatcct
      961 gtaccgtgcg gtcgggggcc gagctgtgac gggctcccca gcgagataac gtccaacgtc
     1021 cgccgcgagc tccgacaccg acgcgtagcg gcgcgccggc tgcttctcca gcgtccgcat
     1081 cgtgatccac gccagttcgc ccctcaacgc tcgcgacaac gagcgcacgt ccgtctgccg
     1141 ccgccaggcg atctcctccg ctttcgcatc cagagcgctc aaccgcctct ccggagtggg
     1201 cgggtctgcc tcccggatca catgcagcat ctccaacgcc cccgcctccc ccatctcccg
     1261 cagggcaaac ggccgcgccc ccatcagcag ctcgtacagt acgaccccca gggaatagac
     1321 gtccgcccgc tcgtccacat ccagcgccgt cacccccgcc tgttccgggc tcatgtactc
     1381 cggagtaccg accatcacgc cctgctgggt gaacaatgtc cgcgctgtca ggcgctgact
     1441 gatcgccttc gccacaccga agtcgatcac cttggccaga ggccggccgt cttgctccgc
     1501 caccaggatg ttggacggct tgacgtcccg atggatgatt cccttctggt gcgcgtgatg
     1561 gatcgcctcg catgtctgca cgaacaatcc aagtcgctca cgcaggttca gccgccgctt
     1621 gtcgcagtag tccgtgattg gcagccctgc tacgtgctcc atcacgaagt atggtcgtcc
     1681 gttcggcgtc aacccggcgt cgaatacctt ggccacaccg gtgtggctca tgagcgcgag
     1741 tgcctgccgc tccgattcga agcgcgccag tacctgcgcc gaatccatcc ccggcttgat
     1801 cagcttcagc gccacgcgcc ggcggatcgg cgcctcttgc tccacgaggt acaccgaccc
     1861 catgccacct tcgccgagca gctcgaggat cttatagggg ccgatgcgct cgtggacccg
     1921 ggactgcggc tgcgggactg tcgactcggt gctcgggcga ttctgatcgt ccagcccaag
     1981 cgccgatagg caccgcgggc acgggcccgc agggccaccc tcggggagtt cgccaccgca
     2041 agcggggcaa gaagcgggtc gagtcacggc tccctctcac gagctccgtc gcatgattgg
     2101 agtcacgcag cgggctcgag caggatttgc tgtggtggtc caccgattct acagggtcgg
     2161 actcccacct ggaatcctct acatatttta ataggctaag ctgccggcca acccattatc
     2221 cctggattcc ttcgggaggc tggtcatgct ccgtcccgcg caattccgtc ctcttccatt
     2281 gccacgaggc tggcggtcgc tatttccttc ttccagactt cgaacgctcc gccgcctctg
     2341 cgtccgcggg gacagctacc tggccgagac gacttatacc tgggccggga ttgctcctgt
     2401 tggatcaatg agcctctgcg catggcgcac ctgagccact acagtcagga tctatttgca
     2461 aggagggaca tcctcgcgct cttgcttgat aacgatgcgt tcaactgagc tcaccttggc
     2521 tttctttggc ctggacgagt ttttcccagg ggagagttgc ggaaatggag agggtcccgc
     2581 aggttc
//
LOCUS       DASYRV010000197         4612 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3156112, whole genome shotgun sequence.
ACCESSION   DASYRV010000197 DASYRV010000000
VERSION     DASYRV010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4612
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3156112"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            790..1161
                     /locus_tag="VGQ24_05010"
     CDS             790..1161
                     /locus_tag="VGQ24_05010"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEV8454224.1"
                     /translation="MKPLLVLVVDGDSERRQEILRLLRQAGHQVAITDSVAAGETLEL
                     GSYDLLVLDPALPSIDSVALRQAVSFAAPAPPDSLENAERRQVALMLRHTSGNKRKAA
                     HLLGISRSTLLNKVRKYGLEG"
     gene            1166..1780
                     /locus_tag="VGQ24_05015"
     CDS             1166..1780
                     /locus_tag="VGQ24_05015"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HEV8454225.1"
                     /translation="MAGRRAGLRVWSLVVAALVMQWMNTTPEAVAQVRRPIPNGQLTS
                     GTLSFDGHATVGDFTGTTNTVAGQITGAPDISGVRGWVEAPVHSLKTGDRKRDKDLNK
                     SMESSKYPNLRFDLNRITAKKSAGDSIPVTLYGTLTIHGVTRRLELPGTIEFKGTNAR
                     VRSDFPLNLKEYGIGGLSKMLGILKMHENIEVHVDLVFQIGARG"
     gene            complement(1873..2298)
                     /locus_tag="VGQ24_05020"
     CDS             complement(1873..2298)
                     /locus_tag="VGQ24_05020"
                     /inference="COORDINATES: protein motif:HMM:NF023444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
                     /protein_id="HEV8454226.1"
                     /translation="MRQGFSLVELMLVLAVASLLFGIALPRLSGALDHIEVESQANHL
                     VAAHRRARIMAVTRSQVLVLTIDSANIVIRPRGQASPLWAEDGPAAARVTLEGPARQF
                     TFSPEGLTLGLSNATLRLTRGSASRTIVVSRLGRVRIAH"
     gene            2471..3757
                     /locus_tag="VGQ24_05025"
     CDS             2471..3757
                     /locus_tag="VGQ24_05025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454227.1"
                     /translation="MYTPQLLFGEVGLSSDILNHEPFLERARLQREQERDGSARLALG
                     AYVVARLINKLLTMEAGPDALDGFRWQLDAVRRHIDELPADAPETAHLAGIAAAVSAE
                     GRISAGLWMNLTAYAYFLEHEGRLEESLEILNLATRAQGQGTPPEDFAAYALFAARLN
                     RQLARWDTATTCYAAAEEAALACGDDISVLRGRLGQGAVHRGRGNLPLAREIAESVVR
                     DASKLELAEVQALGYADLGAVCALQGLQLEELEANYQAFRLTPDAHQRMRTLGDLGIG
                     LCRIGAFQVARLAFEIVINSNTSFVVRSNTLLELMDLESSIGNRVSFERCRGMIEQNV
                     SRLSPSAATDYQYKLGTGFMRFGQLTRARAAFMAGMELAERHQLNAWYFRIEQALNEL
                     AERPQQPEPTLQSELSEAPAIREMEVGLREYALSPE"
     gene            4064..>4612
                     /locus_tag="VGQ24_05030"
     CDS             4064..>4612
                     /locus_tag="VGQ24_05030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454228.1"
                     /translation="MLLAAVPAERMSRLRMLDPDRYQWVCGSGWPEAVDAIRAKPVEM
                     AVVDPLLGGEARAHGIERIRLLFPSLPLLIYTELAPATAAVLLQLGRAGIRRVVFQRF
                     EDAPASLRTALQAELDQSASQQVMQALGDALQELPRELLRALETMLHAGDEAPTVTAL
                     AERAQLTRRTCERWFTKVGLPSP"
BASE COUNT          854 a         1417 c         1518 g          823 t
ORIGIN      
        1 gtcaggcgga gaccgtgcga ggctacggca atgaccgggc gatccgggtc cagtccgcct
       61 tgcggcagta cgagaacgct ctccgcgggt tcctcgggac catggggatc agggtcacgc
      121 cgctgggcgc gaacccgcgt ccctcggccg ggtaggcgcc gaaaaatgtg gattcacatg
      181 tccacatttt gtggagggag cagggtatgg ccagcgttgc gtgagggtta ggtttccaca
      241 tccggtccac ctaagaacgt tgtaacccga agaaacatag gcacttgcga ctccctcgct
      301 ggtgcctatc tttgtgccac tgcctggagg atacgtgctg cgacccagtg tttcagcggc
      361 ggccttgggg caagttcgag tgggatatca ggggagagcg ccgacgcaac caagggctca
      421 ggcactcgtt gatcctggtg atcactccga ctcggacagg tgaagccagt cgcgtgcttc
      481 atccaccccg atctagcgcc tcggggtgca gtgcgaaggg tcagtccgcg acccgatccg
      541 actcgcagcg ctcgcataga cgaaccaggt aggatggcca tcctggcctg gggatggacg
      601 ccaaggcttc accgagccct cccgagcggc gaatcagcca accggtggca ggtgagagaa
      661 gaacggcagc agtgatgctc cgaccttgga tagtcaatgt gggggacggc cgtctagcca
      721 cgactagacg gccgttccgt ttttctgtga ggggctatgg gcgagccaat agcctctgta
      781 ctttcaggca tgaagccgct cctcgttctg gtagtagatg gggattccga gcgccggcaa
      841 gagatcctga ggctcctgcg gcaagccggc caccaggtgg cgatcacaga cagtgtcgca
      901 gctggcgaga ctctcgagct cggtagttat gaccttctcg tgctcgatcc ggcccttccg
      961 agtatcgact ccgtcgcgct aaggcaggca gtttctttcg ccgcaccggc tccgcccgac
     1021 tcgctggaga atgcagagcg gcgccaggtg gctctcatgc tccggcacac ctccggcaac
     1081 aaacgcaagg cggctcacct gctcggcata tcgcgctcaa ccctgctcaa taaagtgagg
     1141 aagtatgggc tcgagggctg aaacggtggc cggcagaaga gccggtctcc gagtgtggag
     1201 cctagtggtg gccgccctgg tgatgcagtg gatgaatacg actccggaag cagtggccca
     1261 ggtgcgtcgc cccattccca acggacaact cacctccggc accctgagct tcgacggtca
     1321 cgccaccgtt ggtgacttta ccggcacgac caatacagtg gcagggcaga ttaccggcgc
     1381 acccgacatc agcggtgtgc gaggttgggt ggaggcgccg gtgcattcgc tcaagactgg
     1441 agaccggaag cgagacaaag acctcaataa atcaatggag tcgagcaaat accccaatct
     1501 gcgcttcgac ctgaaccgga ttaccgcgaa gaagtccgct ggtgacagca ttcccgtgac
     1561 cctgtatggc accctgacca ttcacggggt gacccggcgc ctggagcttc cagggacgat
     1621 cgagttcaaa gggacgaacg cccgggtgcg cagcgacttt cccctgaatc tcaaggagta
     1681 cggaattggc gggctgagca agatgcttgg catcctgaag atgcacgaga acatcgaagt
     1741 ccacgtggac ctcgtgtttc agatcggcgc acgggggtga gtgctaccgg caagaaaacg
     1801 gcccggatcc atgcaggcgc ccgggccggg ccgtccgttc gaaggggccg tcgccctccg
     1861 ctcgtccgac cactagtgcg cgatccgaac tcttccaaga cgagagacca ctatggtgcg
     1921 gctggcggag ccgcgagtca gccgcagagt ggcattggaa aggccgaggg tcagtccttc
     1981 gggtgagaag gtgaactgac gagccggccc ctcgagcgtg acgcgagcgg cggctggccc
     2041 atcctcagcc cacagtgggc ttgcttgccc tcgcggccgg atgacgatat tggcggaatc
     2101 gatggtgagt accagtacct gactgcgggt gacggccatg attcgcgcgc gccggtgtgc
     2161 cgccacgagg tgattggcct gcgactctac ctcgatatga tccagcgctc ctgagaggcg
     2221 gggaagggca attccgaaca gcagactggc tactgcaagg accagcatca gctctacgag
     2281 gctaaagcct tgtcgcatgc ctcaggatag ggccagagcg tgcgccggtg gcaccttttt
     2341 tgtgcgggcc gcgccagcaa ttcgcgggct cattctctcg atcaggaatg gcccttgtgt
     2401 gggtgcggcc cgcacgcgat actagcagga acccccagta ggcccaactc tgagacggaa
     2461 gggcgcgcca ttgtacacgc cccagttgct gttcggtgag gttgggttat cctcggacat
     2521 cctcaatcac gagccatttc tcgagcgcgc gcggctccaa cgggagcagg agcgcgacgg
     2581 gtcggctcgg cttgcgctgg gcgcgtacgt cgttgcccgt ctgatcaaca agctgctcac
     2641 catggaggct ggcccggacg ctctcgacgg cttccgctgg cagctggatg cagtgcgtcg
     2701 ccacattgac gagcttcctg ctgatgcacc cgagaccgct cacctggccg gtatcgcggc
     2761 cgcggtgtcc gccgaagggc ggattagcgc cggtctttgg atgaacctca cggcttatgc
     2821 ctactttctg gagcatgagg gacggctcga ggagagcctg gagatcctca acctggctac
     2881 gcgagcccag ggacagggca ctccacctga agactttgcc gcgtacgcgc tgttcgctgc
     2941 ccggctcaac cggcaactcg cccgctggga cactgccacc acgtgctacg ctgcggcgga
     3001 agaggcggca ctcgcatgcg gcgatgacat ctccgtcctc cgcggccggc tcggacaggg
     3061 tgcggtccac cgcggccgcg gcaatctgcc gctggcccgc gagatcgcgg agagcgttgt
     3121 tcgcgatgca tcgaagctcg agctcgctga ggtgcaggct ctggggtacg cagatctagg
     3181 cgcagtctgc gcgctccagg gcttgcaact cgaggagctg gaagccaact accaggcgtt
     3241 ccgcctcacg cccgatgccc accagcgcat gcgtacgctg ggcgacttgg gaatcggact
     3301 ctgccggatc ggcgcgttcc aggtggcgcg gctggccttc gagatcgtga tcaactcgaa
     3361 cacgagcttc gtggttcggt ccaacacgct cctcgagctg atggacctgg aatcgagtat
     3421 tggaaaccga gtttcgttcg agcgctgccg gggcatgatc gagcagaacg tcagccggct
     3481 ttcgcccagc gcggccaccg actaccagta caagctaggc accggcttca tgcgcttcgg
     3541 ccaactgacg cgggcgcgag cggcgttcat ggcgggaatg gagctcgccg aacgtcacca
     3601 gctcaacgcc tggtacttca ggatcgagca ggcactcaat gagctcgccg agcgtccgca
     3661 gcagccagaa cccaccctgc agtcggagct cagtgaggcg ccggcgatac gtgaaatgga
     3721 agtggggctg cgggagtacg ccctgtctcc tgaataaact cattcgaagc gggcgtactt
     3781 cccagtaacc cgtctacggt ttgttattgg cgccctggtt ctcgtcgaac gacggctgcg
     3841 tctggtctga gggccctgta gcgtcagtgc gggtgcaggc gctgctgagg gcgacagacg
     3901 ccagcagggc cataacgatc ccgtaagtct tggtgcgaga cattttaggt ccctttcggg
     3961 gagaggcggt tgtgcccggg gggaaggtac gccgccaatc tgcgggacca gcgccggcgt
     4021 ttttagggcc catttgcgac aaataggggc tgatttgcga catttgctgc tcgcagcagt
     4081 gcccgccgaa cgcatgtcgc ggcttcgcat gctcgatccg gaccgctacc agtgggtgtg
     4141 cggcagcggc tggccggagg cggtggacgc aatccgggcc aagccggtcg aaatggccgt
     4201 cgtggatcct ctcctgggcg gagaagccag ggctcacgga atcgagcgga tccgcctact
     4261 tttcccctca ctgccgctgc tcatctatac tgaactcgcg ccggccacgg ctgcggtcct
     4321 gctccagctg ggacgcgcag gaatcaggcg cgtcgtgttc caacgcttcg aagacgcgcc
     4381 ggcctctctc cggaccgcct tgcaagccga gctggatcag agcgcgtccc agcaggtgat
     4441 gcaggcgctc ggggacgccc ttcaggagct gccgcgcgag ctgctgcggg cactggagac
     4501 aatgctgcat gccggcgacg aagctcctac cgtcaccgca ctggcggagc gggcgcagct
     4561 gacccgcagg acgtgcgagc gctggtttac caaggtgggg ctgccgtcgc cg
//
LOCUS       DASYRV010000198         2086 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_285385, whole genome shotgun sequence.
ACCESSION   DASYRV010000198 DASYRV010000000
VERSION     DASYRV010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_285385"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(274..453)
                     /locus_tag="VGQ24_05035"
     CDS             complement(274..453)
                     /locus_tag="VGQ24_05035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454229.1"
                     /translation="MKNERGVRVTCLACEIDYRLRDETLLPIARCGRCYGTVVAGRTM
                     ADPVFVETAPKARAA"
     gene            611..757
                     /locus_tag="VGQ24_05040"
     CDS             611..757
                     /locus_tag="VGQ24_05040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454230.1"
                     /translation="MHVNLDRLRNPVEFLAGTTPLRRTLVGEWVRPEEPFGMGYAKPP
                     FEDV"
     gene            978..>2086
                     /locus_tag="VGQ24_05045"
     CDS             978..>2086
                     /locus_tag="VGQ24_05045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEV8454231.1"
                     /translation="MLLSALRQLAQGEPRSASRAGVVRGKNSVRGAPDGAVRVLVLTP
                     RDGATREYGLKVLAGLCLALSEIPEREGLAGSSPRSTLNIDVDVKHSGEPGPRRAQGV
                     TPDQLWRVLTELSKLDQVQLHATVRWGTAAGPHSVRFCFADEARFDPNRIGCKACAPC
                     QIMFGPVTSKAAEAVLERMRTRPDIPILTPAATSTSLTRTVPTPGESQRPKSAAFYRF
                     ICPDRAMAERLAEELVYGVRARRIAVLYEDSTYGRGLRADFREALKQRGYQGWDRVPA
                     VSYPAGMARNGGVSVTPKPFDCSLCEQLGGAHTKAPGSGHPVPPSPIRSSQDPREAIR
                     VDLDSVMMQFRAWGADAIGIFGNMDDKKAFLGKYC"
BASE COUNT          367 a          644 c          708 g          367 t
ORIGIN      
        1 cgaggagggc ctttgcctgg tcgggtgtgg gacgcagagt gatggcaatc gcacgcacca
       61 tatcgcccac atgataccct atccgtttca gaaaggaaag cggtgtggcc cggcgcccgc
      121 cgccgagacc gcagaaaacc atcgcggtct cgaaagcgcg gctcccccgc ctccactgcc
      181 gttgaaacgg cctgggttcc acgccgggag tttctctgaa agccatggcc cagcgctttg
      241 ccccctatcc tcagcactgc ccctggcgcc ggctcatgcg gctctagcct tcggcgccgt
      301 ctccacgaag accgggtccg ccatcgttct tccggcgacg acggtgccat agcagcggcc
      361 acaccgggcg atcggcagca gcgtctcgtc gcggaggcga taatcgatct cgcacgccag
      421 gcaggtaaca cgaacgccgc gctcgttttt catgggagac cttctttccc gccgatggag
      481 gagtccatca acgacgcatg gggccggctc ggtgcgaccg ccgggtcagg gcggtgcgaa
      541 tggaaggggc tgatttccct cgctcttact ttatcccgcg aatgttgccg gcagattgcg
      601 gcgtcgtcaa atgcatgtta atttggaccg gctgcggaac ccggtggagt tcctggcggg
      661 gaccacaccg ctgcgacgca cgctcgtggg cgaatgggtc cgtccggagg agccgttcgg
      721 catgggctac gcgaagccgc cgttcgagga cgtctaggcc gcatccacca gaccacgccg
      781 ccgcaatacc tggcgccttc ctttcagttg aagagatttc aaccgaaaag gtggaagtca
      841 ttctgccgga cggtgtggaa cagccagtcg ctgcgaccga aggacctcca ctcggcgaga
      901 ccaagcggag cagcgaaggg agtgttcagg tggagcgtag gaactggagg cggggccttt
      961 gcgtactctt gggagtgatg ttgctcagcg cgctgcggca gctcgcgcag ggtgagccca
     1021 ggtccgcgag ccgggccggt gtggtccgcg gcaagaattc cgtgcgcggc gcacccgatg
     1081 gcgcggtgag ggtgctcgtg ctgacgccgc gggacggagc gacgcgggaa tacggcctga
     1141 aggtgctcgc cgggctctgt ctcgcccttt cggagattcc cgaacgagag ggcctggccg
     1201 gcagctcacc caggtccacc ctcaacatcg acgttgacgt caagcattcg ggcgagcctg
     1261 ggcctcgacg ggcacagggg gtgacacccg atcagctctg gcgggtgctg acggagttga
     1321 gcaagctgga tcaggtccag cttcacgcga cggtgcggtg gggcacggcg gcaggacctc
     1381 actccgttcg tttctgcttc gctgacgagg cgcggttcga tccaaatcgg atcggctgca
     1441 aggcgtgcgc accctgccag attatgttcg ggccggtgac aagtaaggcg gcggaagcgg
     1501 tcctcgagag gatgaggaca cgcccggaca ttcctattct caccccggcc gccacgagca
     1561 cctcgcttac gaggacggtt cccacaccgg gagagagcca gagacccaag tcggcggcgt
     1621 tttaccggtt catttgcccg gatcgcgcga tggcggagcg tctggccgag gagctggtct
     1681 atggtgtgcg ggctcggcga atcgcggttc tctatgagga ctcgacatac gggcggggac
     1741 tgcgggcaga ttttcgcgag gccctgaagc aacggggtta tcaaggctgg gaccgggtgc
     1801 cggcagtctc atatcccgcc gggatggccc ggaacggcgg cgtctccgtc acgccgaagc
     1861 cgttcgattg ttctctctgc gagcagctcg gcggcgcaca caccaaagcg ccgggcagcg
     1921 gccatccagt cccgccgagc cctatacggt cgtcgcagga tccgcgcgag gccatccgtg
     1981 tggacctgga cagcgtcatg atgcagtttc gcgcctgggg agccgatgcg atcggcatct
     2041 tcggcaatat ggatgacaag aaggcgttcc ttggtaagta ttgcaa
//
LOCUS       DASYRV010000199         2974 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_491614, whole genome shotgun sequence.
ACCESSION   DASYRV010000199 DASYRV010000000
VERSION     DASYRV010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2974
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_491614"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(315..701)
                     /gene="rplL"
                     /locus_tag="VGQ24_05050"
     CDS             complement(315..701)
                     /gene="rplL"
                     /locus_tag="VGQ24_05050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEV8454232.1"
                     /translation="MATTTLSNEEILEAIGHKSVLELADLIEAFKTKFNVTVAAAPVS
                     GGGGGGAAAAAVEEKTEFSVVLKAGGAKKIQVIKVVREITSLGLKEAKDAVDNAPSVL
                     KEGISKAEAEEIKKKLEDQGAEVELK"
     gene            complement(721..1209)
                     /gene="rplJ"
                     /locus_tag="VGQ24_05055"
     CDS             complement(721..1209)
                     /gene="rplJ"
                     /locus_tag="VGQ24_05055"
                     /inference="COORDINATES: protein motif:HMM:NF000955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEV8454233.1"
                     /translation="MNKTERQETVATLSALLKDTPHLYVTDFSGMSVLRMTEFRRRLR
                     AAGVSYVVVKNTLAQRALAANGITGLDEHLAGPTGLVLTKDPLTAAKILGEFAKEFER
                     PTVKAGLVDGKTVAPAHVKRLGEIPSREVLLAQIAGSMNGILYSFVGALEALREQRGT
                     AS"
     gene            complement(1206..1895)
                     /gene="rplA"
                     /locus_tag="VGQ24_05060"
     CDS             complement(1206..1895)
                     /gene="rplA"
                     /locus_tag="VGQ24_05060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEV8454234.1"
                     /translation="MHSPGKKFRAAVAKVDRAREYQIPDAVALVKGASYAKFDETVDV
                     AVRLGVDPRHADQVVRGTVVLPHGTGKPVRVLVITQGDRVREAEAAGADFVGIEYIQK
                     LKDGWLECDVIVATPDVMGQLGQLGRVLGPRGLMPNPKAGTVTMDVAKAVREIKAGKI
                     EFRVDKTGNVHAPVGKVSFSPAQLADNVGAFMDTILRAKPSAAKGTYIRSATISSTMG
                     PGVRLDTAVYR"
     gene            complement(1895..2320)
                     /gene="rplK"
                     /locus_tag="VGQ24_05065"
     CDS             complement(1895..2320)
                     /gene="rplK"
                     /locus_tag="VGQ24_05065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006676477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEV8454235.1"
                     /translation="MAKKIQALVKLQCPAGAATPAPPVGTALGPHGVNIMEFVKQFNA
                     RTQSQSGMVIPCVVTIYADRTFTFITKTPPAPNLLLKEAGVEKGSGQPNRNKVGKVTR
                     AQVKKIAEIKMADLNASDLDSAMKMIAGTARSMGLEVVD"
     gene            complement(2513..>2974)
                     /gene="nusG"
                     /locus_tag="VGQ24_05070"
     CDS             complement(2513..>2974)
                     /gene="nusG"
                     /locus_tag="VGQ24_05070"
                     /inference="COORDINATES: protein motif:HMM:TIGR00922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEV8454236.1"
                     /translation="DDPRPAEQKLIRQALVPVQDVLEIKNGKKVTVERKLYPGYVLVE
                     MAMSQEALHVVNSIQGVIKFVGTGKLPQPLRQDEVNRLLGIAEAVAESEPKEEIPFMV
                     GQVVEITEGPFSDFSGTVEEVLADKGKVKVSVSLFGRPTAVELDYLQLRGH"
BASE COUNT          426 a         1057 c          940 g          551 t
ORIGIN      
        1 gggacgagca gcgtctggaa cgcggccgtc tggatgtcga ggaggtgcgg catcggcatg
       61 ccgccctcgc gcttgctgaa cgtgatgacg gatcgggtcg tctgaggcat cagtagctca
      121 ctcccacgca acacaaatgg ccccaacacg gatcccccgc cggaagacgg ggtgacctac
      181 ggggctcggc agattccgga acttccgaga gcttcgagcg tgcattcgtc tcactgaaat
      241 aggttgaagc tgccttgccc ccgccgtgag ccgggccgga acggcccgcc cacggtcggg
      301 ggagcgcttc cgccctactt cagctcgact tccgcaccct ggtcttccag cttctttttg
      361 atctcctcgg cctccgcctt cgagatccct tccttgagga cgctgggcgc gttgtccacc
      421 gcgtccttgg cttccttcag gcccaggctg gtgatctcgc gaaccacctt gatgacctgg
      481 atcttcttgg cgccgccggc cttgaggacg acggagaact ccgtcttctc ctcgaccgcg
      541 gccgccgccg cgccgccgcc cccgccgccg ctcaccgggg ccgccgcgac ggtgacgttg
      601 aacttcgtct tgaaggcctc gatgagatcc gcgagctcga ggacggactt gtggccgatc
      661 gcttcgagga tctcttcgtt gctcagcgtg gtcgttgcca tgttcacgat ctccgtacgg
      721 ttaagaagcg gtaccgcgct gttcgcggag ggcctcgagg gcgccgacaa aggaatacag
      781 gatgccgttc atcgacccgg cgatctgggc cagcagcacc tcgcgcgacg ggatttcgcc
      841 gagacgcttg acgtgcgcgg gggcgacggt cttgccgtcg accagcccgg ccttcaccgt
      901 gggccgctcg aactccttgg cgaactcgcc caggatcttg gccgcggtga ggggatcctt
      961 cgtgagcacc agcccggtcg ggccggccag gtgctcgtcc agcccggtga tgccgttggc
     1021 ggccagcgcc cgctgggcca gcgtgttctt cacgaccacg tacgagaccc ccgcggcgcg
     1081 gagccggcgg cggaactcgg tcatgcgcag cacactcatg ccgctgaagt cggtcacgta
     1141 gagatgcggg gtgtccttga gcagcgcgct cagggtggcc accgtctcct gacgctcggt
     1201 cttgttcatc ggtacaccgc cgtatcgagc cgcacacccg gccccatggt gctcgagatg
     1261 gtcgccgagc ggatgtaggt acccttggcc gcggacggct tggcccggag gatggtgtcc
     1321 atgaaggcac ccacgttgtc ggccagttgc gccggcgaga acgagacctt cccgaccggg
     1381 gcgtgcacgt tcccggtctt gtccacccgg aattcgatct tgcccgcctt gatctcccgg
     1441 accgccttgg ccacgtccat cgtcaccgtc cccgccttgg ggttcggcat gaggccgcgg
     1501 gggcccagga cccggccgag ctggccgagc tggcccatga cgtccggcgt ggcgacgatg
     1561 acgtcgcact cgagccagcc gtccttgagc ttctggatgt actcgatgcc cacgaagtcg
     1621 gcgcccgcgg cttccgcctc acggacccgg tcgccctggg taatcaccaa cacccgaacc
     1681 ggcttcccgg ttccgtgggg cagcaccacc gtcccgcgca ccacctggtc ggcgtggcgc
     1741 gggtcgacgc cgagccgcac ggcgacgtcc acggtctcat cgaacttggc gtacgacgcg
     1801 cccttcacca gggccacggc gtcggggatc tggtactcgc gcgcccgatc gaccttggcg
     1861 accgcggccc tgaacttctt gcctgggctg tgcatcagtc caccacctcc agtcccatgg
     1921 accgggcggt gcccgcgatc atcttcatgg cgctgtcgag gtcggaggcg ttgagatcgg
     1981 ccatcttgat ctcggcgatc ttcttgacct gcgcgcgcgt caccttgccc accttgttcc
     2041 ggttgggctg gccgctcccc ttctcgaccc cggcctcctt cagcaggagg ttgggggccg
     2101 ggggggtctt ggtgatgaac gtgaaggtcc gatcggcgta gatcgtgacc acgcacggga
     2161 tcaccatccc gctctggctc tgcgtccggg cgttgaactg cttcacgaac tccatgatgt
     2221 tcacgccgtg cggacccagg gccgtgccca ccggaggcgc gggcgtagcc gcgccggccg
     2281 ggcactgcag cttgaccaat gcctggatct tctttgccat tgctctcctc gtaacgtggg
     2341 cccgtcagtg ggcctactgc cgcgaatgcc cgcgcggtcg cgggtggtgc agcgtcactt
     2401 cgccatcgtc atcccgaccg gagcgaggga ccttctcaac cgtcctcgac ccaagccacc
     2461 gtccgggacc agcgggcaag gtccctcgct ccgctcggga tgacggggcc ggctagtgtc
     2521 cccgcagctg cagataatcc agctccaccg ccgtcggccg cccgaacagg ctgaccgaca
     2581 ccttcacctt gcccttgtcc gccagcacct cttcgaccgt gccgctgaag tcggagaacg
     2641 gcccctcggt gatctcgacc acctggccga ccatgaaggg gatctcctcc ttgggctccg
     2701 actccgcgac cgcctcggcg atgccgagca gccggttcac ctcgtcctgc cgcagcggct
     2761 gcggcagctt accggtgccg acgaacttga tcacgccctg gatgctgttg acgacgtgca
     2821 gcgcttcctg gctcatcgcc atctcgacca gcacgtagcc cggatagagc ttgcgctcca
     2881 ccgtgacctt cttgccgttc ttgatctcga ggacgtcctg gaccggcacg agcgcctggc
     2941 ggatcagctt ctgctccgcc ggacgcggat cgtc
//
LOCUS       DASYRV010000200         5787 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2743325, whole genome shotgun sequence.
ACCESSION   DASYRV010000200 DASYRV010000000
VERSION     DASYRV010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5787
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2743325"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VGQ24_05075"
     CDS             complement(<1..214)
                     /locus_tag="VGQ24_05075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454237.1"
                     /translation="MSRLRRAAGPLFGLCHLHAVRVGAVRVKAGRVGGGAAGQTTARP
                     HGRETDGQREQLADGTPQLDLLPCRPA"
     gene            502..1245
                     /locus_tag="VGQ24_05080"
     CDS             502..1245
                     /locus_tag="VGQ24_05080"
                     /inference="COORDINATES: protein motif:HMM:NF021385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase"
                     /protein_id="HEV8454238.1"
                     /translation="MSTPATGERTRERSIDDRVEAVAWTDVSTHLNGYGWAMVEKILT
                     PDECRAIAGLYDDGRLFRSRVVMARHGFGRGEYKYFRYPLPDIIADLRTALYGRLAPL
                     ANRWNESMNIDVRYPDAHADFIERCHQAGQTRPTPLLLQYGAGDYNCLHQDVYGEHVF
                     PFQVAFLLAEPEKDFTGGEFVLTEQRPRMQSRAEVVPLHRGDGVIFAVHHRPVQGARG
                     VYRVNLRHGVSRLRSGRRHTVGVIFHDAT"
     gene            1258..1728
                     /locus_tag="VGQ24_05085"
     CDS             1258..1728
                     /locus_tag="VGQ24_05085"
                     /inference="COORDINATES: protein motif:HMM:NF019632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEV8454239.1"
                     /translation="MDRKQLLNRLDQAWEAFKQSYAGLPDGELLEPGVTGAWSIKDII
                     AHVTWWEEEALTHLPLILTGGRPPRYSVTYGGIDAFNARMTEQRKDLPLAEVLRQRDD
                     VHRRLIAFIESAPDDQATGDTRFRRRLRLDTYGHYPKHARAIRIWREQRSTLPA"
     gene            1754..2236
                     /locus_tag="VGQ24_05090"
     CDS             1754..2236
                     /locus_tag="VGQ24_05090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454240.1"
                     /translation="MSIRWIAVAAAGMLMAFAVPATAQRAVVQQDSAEAQLRGVLRAF
                     YFNLAHHDWEAIAADVLSAKVVASRSAPSGIQTAPRDRARAPRSSGSANEPVACSSST
                     SAGVDEAAIHLDGEWAGVSIPRCGAAATGVDEFRLIHIEKRWRFVYIDLFEEPMIVPD
                     "
     gene            2251..3477
                     /locus_tag="VGQ24_05095"
     CDS             2251..3477
                     /locus_tag="VGQ24_05095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacetone oxidase family FAD-binding enzyme"
                     /protein_id="HEV8454241.1"
                     /translation="MNRRVAIIGAGAAGSMAAIFAASAGAETLLLESTRDGGRKILIS
                     GGGRCNILPARVDERRFVTDSSPNTLRKILRSWPLPEQVAFFERELNLPLVEEEESAK
                     LFPVSNRARDVRDGLLALAARRGARFMPETTVVGIAPTSNGWSVESDGAPPLSVDAVV
                     VASGGLSVPATGSDGRGLAMLAKLGHTIHPTYPALTPVVAEPAPFGALAGISLPVTVT
                     AHDDGRSAIATGGFLFTHRGYSGPAVLDVSHVLVRSRMERESAARLVVRWTRLDEAGW
                     KAALKPEGPGTVAGLLRRELPERLAEAISGLAGVPPSRTLAQLRRDERLRLIEVLVRG
                     DLRWTADEGYKKAEVTGGGVSLAEIDTRTMESRRHPGLFLCGEVLDAFGPIGGYNFLW
                     AWATGRVAGSAAARRP"
     gene            3501..4043
                     /locus_tag="VGQ24_05100"
     CDS             3501..4043
                     /locus_tag="VGQ24_05100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEV8454242.1"
                     /translation="MNFTLSDALPVLRRTPAVLRAWLWDLPDTWTTANEGPDTWSPYD
                     IIGHLIHGERTDWIPRTELLLAHGGSRPFIPFDRFAQFKDSRGKSLHELLETFSELRA
                     QNLARLESLRLTPPDLERRGRHPELGPVTLGQLLATWVAHDLNHVGQIARVMGRQYTH
                     AVGPWLEYLPMLTSRRRAEP"
     gene            4412..>5787
                     /locus_tag="VGQ24_05105"
     CDS             4412..>5787
                     /locus_tag="VGQ24_05105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454243.1"
                     /translation="MQGVYRYKVRGLTAGSGVFTSMMTAQGMYVATAHRMLPGFFKIL
                     GGMAKFSKDPSTAEILDFFRSGTPGVDLSTIPVSAGLDVEVEFTLEQAKKEWRLKRGS
                     YRWSSDAHFSFSAGEGQITENVKGQGSGALDPTTSSISLVTTGKRGALRSELNVEVPI
                     PGNAAGKSVITNGPIKIAFDYRGDKVIMEVDLPGLAHHREVLGGGLWGHQISFSKSGP
                     PERVIKGQDTYQDLLDSHVVEEWELWDECTATIESPSDNERMVYNLEKPARLLDTALA
                     NISPSFWENELSWLLPEISGSLLDPPRLKRNGNDFDIVYTHLPEKNSAFDFREVVADF
                     SDRAKAAGCKNPKLTKVGYFFPRTGYNNPGPSAKAEGNPEMVVDPNWFFYWGQTDAAQ
                     GRSAELRYGGTAGICSERRVIEEVDGKELTKVIREPVFGYAPWGKPYVVICNLEVVGF
                     TDQNPYTE"
BASE COUNT         1024 a         1817 c         1888 g         1058 t
ORIGIN      
        1 cagcggggcg gcagggcagt aggtcaagct gaggagtgcc gtcggcaagt tgctctcgct
       61 gcccatctgt ctcgcggccg tgcggcctcg ctgttgtttg ccccgctgcc ccgccgccca
      121 cccgccccgc cttcactcgc actgccccca cccgcactgc gtgcaggtga cacaggccga
      181 agagcggacc agcagccctc cgcagtcggg acatctaccg accatgcgga tggtaggctc
      241 gagcttggga accctgcaat cggggagtgg ggtaggatga ggctggatcg gtggcactgg
      301 aacccccata gcttcggtgt ttgttcggct tacttagccg aatatacccc gaaggtgggg
      361 agcgtcaaga tcgcctcgga ttcggactcc gtcggaccat cagcatgcga gttcgagagc
      421 aagattcgga gtgcgaagcc ggcctgtacc tgacacattg tgccgagcga ctcaagtctt
      481 ctcgagcagg agaatacaat tgtgagcaca ccagccactg gggagcgcac gcgcgagcga
      541 agtatcgacg acagggtgga agccgtcgca tggacggatg tgtccaccca cctcaacggc
      601 tacgggtggg cgatggtcga gaagatcctg acccccgatg aatgccgggc catagccggt
      661 ctgtatgatg acggccgtct gttccgcagt cgcgtcgtca tggcgcggca cggattcggc
      721 cggggcgagt acaagtattt caggtacccg ttgcccgaca tcatcgcgga tcttcgcacc
      781 gcgctgtacg gccgcctcgc cccgctggcc aatcgctgga acgaatcgat gaacatcgat
      841 gtgcgctatc ctgacgccca tgccgacttc attgaacggt gccaccaggc cggccaaaca
      901 cggccgacgc cgctgctgct ccagtacggc gcgggcgact acaactgcct ccaccaggat
      961 gtatatggcg agcacgtctt ccccttccag gtggcctttc tcctcgcgga gccggagaaa
     1021 gacttcaccg gcggggagtt cgtgctgacc gagcaacggc cgcggatgca gtcgcgggcc
     1081 gaggtggtgc cgttgcaccg tggtgacgga gtgattttcg ccgtgcatca tcgcccggtg
     1141 cagggcgcac gaggggtcta tcgggtgaat ctgcggcatg gtgtgagccg tctcaggtca
     1201 ggtcgtcgcc acaccgtcgg cgtgatcttt cacgacgcga cgtgagggag gcggatcgtg
     1261 gatagaaagc aacttctgaa ccggctcgac caggcgtggg aggcgtttaa gcagtcgtac
     1321 gccggtttgc cggacgggga gctattggag cctggtgtca cgggcgcgtg gtcgatcaag
     1381 gacatcatcg cccacgtgac ctggtgggaa gaggaggctc tgacccatct gccgctcatc
     1441 ctcacgggcg gaagaccacc gcggtattct gtgacgtacg gcggcatcga tgccttcaac
     1501 gcccggatga cggagcagag gaaggacttg ccgcttgccg aagtgctgcg gcagcgggac
     1561 gatgtccacc gccgccttat cgccttcatc gagagcgcgc ccgatgacca agccaccggt
     1621 gacacccggt ttcgccgccg ccttcgactc gacacctatg gccactaccc gaagcacgcg
     1681 cgggcgatac gcatctggcg ggagcagcga tcaacccttc ccgcctgatc gggcagcaca
     1741 cggggcggcg gccatgtcca ttcgttggat cgcggttgcc gctgccggga tgctgatggc
     1801 gttcgccgtg cccgcgaccg cccagcgggc tgtcgtccag caggactccg cggaggctca
     1861 gcttcgtggc gtccttcgcg cgttctactt caatctggcc catcacgact gggaggctat
     1921 cgccgctgat gttctatcgg cgaaggtggt ggccagccga tctgccccct caggcatcca
     1981 gacggccccc cgagaccggg ctcgcgctcc acgttcatca ggctcggcga atgagccggt
     2041 agcgtgttcc tcgagcacct cggctggggt agacgaggcg gctattcacc tagatgggga
     2101 atgggccgga gtgtccattc cgcgctgcgg cgctgccgcg accggggtgg acgagtttcg
     2161 attgattcac atcgagaagc gttggcggtt tgtctacatc gatctgtttg aagagccgat
     2221 gatcgtgcca gactaagatt ccaggtgccc atgaatcgcc gtgtcgccat aatcggagcc
     2281 ggcgccgccg gctcgatggc ggcgatcttc gcggcttcgg ccggcgccga gacgctgcta
     2341 ctcgaaagca ccagggacgg cgggcgcaaa atcctcatca gcggcggggg ccgctgcaat
     2401 attctcccag cccgggtgga cgaacggcgc ttcgtcaccg attcgtcacc gaacaccctc
     2461 cgcaaaatcc tccgttcgtg gccgctgccc gagcaggtgg ccttcttcga gcgggagctg
     2521 aacctgccac tggtcgagga agaggagtca gccaaactct tccccgtgtc gaatcgggcc
     2581 cgcgatgtac gcgacggact cctggcgctg gcggcccgcc ggggcgcccg cttcatgccc
     2641 gagacaacgg tcgttggcat cgctcccaca tcgaacgggt ggagcgtgga gagcgatggc
     2701 gcgccgccgc tctcggtgga tgctgtggtc gtggcgagtg gcggcctctc ggtgccggcc
     2761 accggcagcg atgggcgggg gctcgcgatg ctcgccaagc tggggcatac catccacccg
     2821 acgtatccgg cgctcacccc cgtcgtggcg gagccggcgc ccttcggggc gctcgccggg
     2881 atctcgctcc cggtaacggt cacggcccac gacgacggca ggagcgcaat cgccaccgga
     2941 ggtttcctct tcacccaccg tgggtacagc gggcccgcgg tgctggacgt ctcccacgtc
     3001 ctggtgcgct cgcgaatgga aagagagtcg gcggcccggc tggtcgtacg gtggaccagg
     3061 ctcgacgagg ccggttggaa ggctgccctc aagccggagg gtccagggac tgtggccggg
     3121 ctgctccggc gcgagctacc cgagcgcctg gccgaggcga tatccgggct ggccggcgtt
     3181 ccgccatccc gtaccttggc gcaattgcgc cgggatgagc ggctccggct gatcgaggtg
     3241 ctggtccgtg gtgaccttcg ctggaccgcc gacgagggct acaagaaggc cgaggtgacc
     3301 gggggcggtg taagcctggc cgagatcgat actagaacca tggagagccg ccgccatccc
     3361 ggactctttc tctgtgggga ggtgctggat gccttcggtc cgatcggggg gtacaatttt
     3421 ctctgggcct gggcaaccgg ccgcgtggcg ggcagtgccg ctgcgcgccg tccctgagtg
     3481 gcgctagact tggatgcatc gtgaacttca ccctgagcga cgcccttccc gtcttgcggc
     3541 ggactcctgc ggtgctccgc gcctggctct gggatctccc cgatacctgg accaccgcga
     3601 acgagggccc cgatacctgg agcccctacg acatcattgg gcacctcatc catggggagc
     3661 gtaccgactg gatcccccgc accgagcttc tgctggccca tggcggatcg cggccgttca
     3721 tccccttcga tcgatttgcc caattcaagg actctcgcgg caagtcgctg catgagctgc
     3781 ttgagacctt cagtgagctg cgagctcaga acctcgcccg cctcgaatcg ctgcggttga
     3841 ccccaccgga tctcgagcgt cgaggccgac atcctgagct cggtcccgtc accctgggtc
     3901 agctgctcgc gacctgggtg gcccacgatc tcaaccacgt cggacagatc gcccgggtca
     3961 tgggaaggca gtacactcac gcagtgggcc cctggctgga gtatctgccg atgctgacat
     4021 cccggcgtcg tgctgaaccc taaggcatct tagtcccaag gccctggcgg aatctggtac
     4081 cagtccgcaa ggcttcgatg ccgaccgccc gcactattgc tcggtgccgg tctcggtggt
     4141 cccgcggccg cgctttcgag agggtgggac cgcggggtcg agtcagctct tgttcgcgcc
     4201 gccgggcaag gttcgcgccc gcgggtcgat cttgcacatc gtcgtaccgg gacggagatt
     4261 gagctggact gctccgtcta ctcccctcga ggctgttgca atgcccggcc cgatgcttcg
     4321 ccgcgcgacg ctcctatccc tcctgctcct ttgcgcggca gtcgaatctc cctcaccggc
     4381 gcgcgccgct cccggtgccc ctccggaaac gatgcagggc gtctaccgct ataaggtccg
     4441 ggggctcacc gccggcagcg gcgtattcac gagcatgatg accgcccagg gcatgtacgt
     4501 cgcgacggct caccggatgt tgcctgggtt cttcaagatt ctcggcggaa tggccaagtt
     4561 ctccaaggat ccttcgactg cggagatcct cgattttttc cgctccggga cacccggcgt
     4621 ggacctttcg accatcccgg tctcggccgg attggacgtc gaggtcgagt ttacgcttga
     4681 acaagccaag aaagagtggc ggctgaaacg gggcagctat cgatggtcgt cggacgcgca
     4741 tttcagcttc agtgcgggcg agggccagat aacagaaaat gtcaagggac agggaagtgg
     4801 cgcactggat cccacgacct cctccatcag cttggtgacg accggcaaaa ggggcgcact
     4861 tcggagcgag ctcaatgtgg aggtaccaat accggggaac gcagccggga agtcggtcat
     4921 aacgaacggg ccgataaaga tagcgttcga ctaccgtggc gacaaagtga ttatggaggt
     4981 ggacctcccc ggacttgccc atcaccggga ggtgttgggc ggcggcctgt gggggcacca
     5041 aatctccttc agcaagagcg gtccccccga acgtgtaatc aagggccagg acacttacca
     5101 ggacctgctc gactcgcatg tggtggagga atgggagctc tgggacgagt gcaccgcgac
     5161 gatcgagagc ccgtcagaca atgaacgtat ggtatacaac ctcgagaaac ctgctcggct
     5221 gttggatact gcactcgcca acatcagtcc ctcgttctgg gagaatgaac tgagttggct
     5281 cttgcccgaa atctccggga gtctgctcga cccaccgcgc ttgaagagaa atggcaacga
     5341 cttcgacatc gtgtacaccc acctgccgga gaaaaactcg gcatttgatt tcagggaggt
     5401 tgtggctgac ttcagcgatc gtgccaaagc ggcaggatgc aagaacccta aattgaccaa
     5461 ggtcggctat ttcttccccc gaaccggcta caataacccg gggccgagcg cgaaggcgga
     5521 aggaaatccg gagatggtgg tggaccccaa ctggtttttt tactggggtc agaccgacgc
     5581 tgcccagggt cgatcggccg agctccgcta tggagggacc gctggtattt gcagcgagcg
     5641 cagagtaatt gaggaagtcg acggcaagga gctcaccaag gttatccggg agccggtctt
     5701 tggttacgcg ccctggggta agccctacgt ggtgatatgc aatctggagg ttgtggggtt
     5761 cacagatcag aatccttaca ctgagca
//
LOCUS       DASYRV010000201         4724 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1530027, whole genome shotgun sequence.
ACCESSION   DASYRV010000201 DASYRV010000000
VERSION     DASYRV010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4724
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1530027"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..244)
                     /locus_tag="VGQ24_05110"
     CDS             complement(<1..244)
                     /locus_tag="VGQ24_05110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454244.1"
                     /translation="MISGRRCNHCTVFSLLLLAAAACKGITEPTAEIPFAPNPVTDAA
                     AQQALACGATHHLTVLRPYQSLRLFVSPDLGYIGGLT"
     gene            541..999
                     /locus_tag="VGQ24_05115"
     CDS             541..999
                     /locus_tag="VGQ24_05115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454245.1"
                     /translation="MITSNPTMEWVLSGWRKKNGSKRFSAKALAKAAKVGHPSVYRIM
                     KGKGTPEQETLDKLGDYFEETAPVVEARKVIPSGATIREPETAFEWLGLARASIDRAE
                     SILKTRGTISGSEGGETLAKIHAGLQDEPKQERPRPGASPQRKASGPEGR"
     gene            1637..2383
                     /locus_tag="VGQ24_05120"
     CDS             1637..2383
                     /locus_tag="VGQ24_05120"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEV8454246.1"
                     /translation="MTATIEGVSGSTTLTITPPGVNSVVVTPSAATIFTGATTAFAAV
                     AKDAQGNTLTGHTITWASSAPSVATVDQAGVVTPLVPGNVNILATSEGRVGFAAVTVK
                     GWLYRSVPDPLGQFPTLIMSVKAEADGTNGSAGGSAATLALACVGGATRTFVILVTTG
                     GPITNNGDVRYRLDQGSTISETWLEVGSNFDGLGYPGTSAAARGLALTWNGGAVLLFE
                     YTEFLGPLRVAKFLLNNMNSFLPGIVAQCP"
     gene            2515..2775
                     /locus_tag="VGQ24_05125"
     CDS             2515..2775
                     /locus_tag="VGQ24_05125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454247.1"
                     /translation="MPKKRPSLREDENERAYRLVQAMTGDGPRPEPPGKREKNPEAVK
                     RGRAGGKVGGKARATSLTPRKLSKIGRDAARKRWQEPEGGSQ"
     gene            complement(2767..3228)
                     /locus_tag="VGQ24_05130"
     CDS             complement(2767..3228)
                     /locus_tag="VGQ24_05130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454248.1"
                     /translation="MSVTYGKAIDYAAVLADLQGKLEQGQARFENWQIEKNDLLATIQ
                     GIKAILARDGGQTALSFPSGISSGGVRNQPVNFQGLNYKNAVRKCFEMKGGGPLTAPM
                     VTDMLLAAGYGKSRTTIKNNVDGTFRVLRERGVLQKREDGRGYELASGSLL"
     gene            3535..4401
                     /locus_tag="VGQ24_05135"
     CDS             3535..4401
                     /locus_tag="VGQ24_05135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_040609789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HEV8454249.1"
                     /translation="MNKMSMERQAAVLRCLCEGNSIRATCRLTGAAKATVQKLLRDVG
                     CHAKNYHDRFVRDVRSKRVQLDELWSFVGMKEKNATIEDKAESRGDIWTWYGLDSDSK
                     LIVAYKVGNRDGRTATEFVADLADRLATRVQLTSDGLRWYLTAVESAFGWNGVDYAQL
                     VKVYGPSIGTGAQKRYSPPEYIGSEKNWVMGKPIMADVSTSHVERMNLTTRMHVRRFT
                     RLTNAFSKKAEYHLYAVALHVLWVNFCRPHTTLSKGKAKTTPAMAAGLADRVWTAEDI
                     LTLMAPAAGPIA"
     gene            4464..>4724
                     /locus_tag="VGQ24_05140"
     CDS             4464..>4724
                     /locus_tag="VGQ24_05140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454250.1"
                     /translation="MPRPRTPRPARGTQGSGLFDGLVHPATPKQNRLYYGDNITIMRE
                     MPSASVDLIYLDPPFNSQRTYNLIYKQLTGLPLPEQEEAFCDA"
BASE COUNT          940 a         1450 c         1469 g          865 t
ORIGIN      
        1 gggtcagccc gccgatgtag cccagatccg gcgagacgaa cagccggagc gactggtagg
       61 ggcgtagcac cgtcaggtgg tgtgtggcgc cgcacgcgag ggcctgttga gccgccgcgt
      121 cggttaccgg gttaggggcg aaggggattt ctgcagtcgg ctcggtgatg cccttacatg
      181 ccgcggctgc aagaagcagc agactgaaaa cggtacagtg gttgcaacgg cggcccgaga
      241 tcatgttacg aggccgccgg cgagagaact tcagctgcga gcttgcgagc gcccatccgg
      301 ataaagtcgg tgggcgtcaa atccgagtga tcgcgctcgt tcaacgccct cgtggcgtcc
      361 tcaatggcct gccagtcctc gggcttccac cgaattgttc gcgccttaag gtcgtcatcg
      421 tggtccgtgt tgccgggtaa agtcatgacc cctaccttgg tgcgttacgg tgcgcctaga
      481 accgttagga acgttgacgg ttccatagta acgcatcgcg ttccctttcg caagggtcag
      541 atgatcacgt cgaatccgac gatggagtgg gttctctccg ggtggcgaaa gaagaacggg
      601 tccaaacgat tctccgccaa ggcgttagcc aaagcggcga aggttggaca tccctccgtc
      661 taccgtatca tgaaggggaa gggcacgccc gagcaggaaa cgctggacaa gctcggggac
      721 tatttcgagg agactgcccc tgttgtcgag gccaggaagg tcatcccgtc cggggcaacc
      781 atccgcgagc cagagaccgc gttcgaatgg ctcggattgg ctcgggcgtc catcgaccgc
      841 gccgaatcca tcctgaaaac ccggggcact atttcaggat ctgaaggtgg agagaccctc
      901 gccaaaatcc acgccggcct acaggacgag ccgaagcagg agcgcccacg gcctggcgca
      961 tctcctcaac ggaaggcgtc gggccctgag ggtagatagg ctccagtgcg ccgccttcga
     1021 tctcatatag cacgcggcca tgattcggta tcgcgaccgg gcggtagcgc gttatgagat
     1081 cggggctgtt ggggtcgaag acgacccggt caccgatgag gatgccgagg tcgaagatag
     1141 ggcgcaaagc gcggaagatc acaggctcca cgggagcctc ccgggtggga agaggcggca
     1201 cgattctacg ataccgaata aatcccggca agggagccga tggcgctact actagcacat
     1261 cttctagtta cgctcgggca aggaacagga taggctctat cgatcaaact tgtctccaat
     1321 gagggtaggt cccatgcgcc gcttgatggt ccttttcgcc gcggcctcga tcgcatgtgg
     1381 aagtaccgac ggaacctctc cgcccgcgcc cccaccgccg ccgcctcccc cagcaccagt
     1441 cgcgaccgtc accgtcacaa tcggagttac gtcaatcgaa gtgggggcct ccacgtcggc
     1501 gaccgcagct gcacgtgatg cccaaggcgt cgtgcttagc ggtcgcgggc caacgacctg
     1561 gaccgcggga ccggcatcga tcgcgacgat cacgcagggt ggcctcgtgt ccggcgtggc
     1621 tccaggtgtc gcgagcgtga ctgccaccat cgagggcgta tccggctcga cgacgctcac
     1681 catcacaccg ccgggggtga actcggtggt ggtgacacca agtgccgcta cgatcttcac
     1741 cggggcgacg acggcctttg ccgcggtggc caaggacgcc caaggcaata ccctaaccgg
     1801 acacaccatc acgtgggcca gcagcgcgcc atctgtggca acggtcgacc aggccggcgt
     1861 ggtgactccg ctcgttcccg ggaacgtgaa cattctcgcg acgtccgaag ggcgagtcgg
     1921 attcgcggcg gtcactgtga agggctggct ctatcggagt gtcccggacc cgctcggtca
     1981 attcccgacg ctcatcatga gcgtgaaagc agaggcggac ggaacaaatg gcagtgctgg
     2041 cggcagcgct gccacgctcg cgcttgcctg cgtcggcgga gcgaccagga cttttgtgat
     2101 cctcgtgacc actggtgggc cgatcaccaa caacggggat gtgcgatacc gcttggatca
     2161 gggttcgacc atctcggaga catggcttga agtggggtca aactttgacg ggctcggcta
     2221 cccaggaact tccgctgcag cccggggact cgcgctcaca tggaatggcg gggcggtgct
     2281 cctcttcgaa tacaccgagt tcctgggccc gctgcgcgtc gccaagtttc tcctcaacaa
     2341 catgaacagc ttcctacccg ggatcgtcgc tcaatgtccg tgaccgacgg acccgagctc
     2401 tccggccggc agcgggacgg gacgctctgg cgcggaaagg agggtagtgg gctagatagg
     2461 gttgttacag actggcgatc gggcctcaag cgggcagggt tttagattcc ctccatgccg
     2521 aagaaacgac cgtccctgcg cgaggatgag aacgagcggg cctaccggct cgtccaggcc
     2581 atgaccggcg acggtccgag gccggagccc cccggcaagc gggagaagaa ccctgaggcg
     2641 gtcaagcggg gcagggcggg cggaaaggtc ggggggaagg cgcgagccac cagcctcacc
     2701 ccgcgcaagc tttccaagat cgggcgagat gcggcccgta aacggtggca ggagcccgaa
     2761 gggggctcac agtaggctcc ccgaagccaa ctcgtagcct cgtccatctt ccctcttttg
     2821 gagtactccc cgctcacgaa gcaccctaaa ggtcccgtcc acgttgttct tgatggtggt
     2881 ccgggacttc ccgtagcccg ccgcaagcag catgtcggtg accatcgggg ctgttagagg
     2941 tcctccgccc ttcatctcaa agcacttccg cacggcgttc ttgtagttaa gcccttggaa
     3001 attaacgggt tgattccgaa ctccacccga agaaatgccg gaggggaacg aaagggcagt
     3061 ttgacccccg tcccgggcaa ggatcgcctt gatcccctgg atggtggcga gtagatcgtt
     3121 cttctcaatc tgccagtttt caaaccgtgc ttgaccctgt tcgagtttgc cttgtaggtc
     3181 agctagcacg gctgcataat cgattgcctt gccgtaagtt acactcatga cctaaacctc
     3241 tccttccggc gacgaggccg attagctata ttcggcacgc actacgggtg tggggcgagc
     3301 ccgaggggct cgaaattgag accccccaga ccgcctcgcg atcatttcac gatcaccacc
     3361 tcctgtccca gcgtcggctc ggggattccc tccaaggaac cttcccccgg gccgatgctc
     3421 gtttgaggca tccccatatt aattccggtc acgtcacccc gcaagtgcga tcacgtcatt
     3481 aatcacgtta ttgacccctt gtgtgtacct aagcaataga ctagattgct ttccatgaac
     3541 aagatgagca tggaacgcca agccgctgtc cttcgctgcc tctgcgaagg caactccatt
     3601 cgggctacct gccgcctgac tggtgcggcc aaggccaccg tgcagaagct tctgcgcgat
     3661 gtgggatgcc acgcgaagaa ctaccatgac cgttttgtgc gggacgttcg ttcgaagcgt
     3721 gtccagctcg acgaactctg gagcttcgtc gggatgaagg aaaagaatgc gaccatcgag
     3781 gacaaggcag agagccgggg cgatatctgg acgtggtacg gcctggattc agattcgaag
     3841 ctgattgttg cctacaaggt tggcaaccgc gacgggcgca ccgcgacgga gtttgttgcg
     3901 gacctggcgg atcgcctcgc tactcgggtt caactcacca gcgacggcct gcggtggtat
     3961 ctgaccgccg tggaatcggc gttcgggtgg aacggggtgg attacgcgca actcgtaaaa
     4021 gtctacggcc cttcaattgg aactggcgcg cagaagcggt atagcccgcc cgagtacatc
     4081 ggatcggaaa aaaactgggt catgggcaag ccgatcatgg cggacgtctc gacgtcgcat
     4141 gtcgagcgaa tgaacctgac cacgcggatg cacgttcgcc ggttcacgcg gttgaccaat
     4201 gcgttttcca agaaggcgga gtaccacctc tacgccgtgg ccctccacgt tctgtgggtc
     4261 aacttctgcc gccctcatac caccctgagc aaggggaagg ctaagaccac gcccgcgatg
     4321 gcggcgggac tggctgaccg ggtgtggact gcggaggata tcctgacgtt gatggcaccc
     4381 gccgcgggcc ctatcgccta gcggcggttg ccagcgtggc agcgtgcttg cctaagtaca
     4441 gctaggccaa tatcttagtt gacatgccgc gaccgcgcac ccctcgcccc gcccggggca
     4501 cccagggctc cggactcttt gacggcctcg tccaccccgc tacccccaag caaaaccggc
     4561 tgtactacgg cgacaatatt acgatcatgc gcgagatgcc gagcgcatcg gtcgatctga
     4621 tctatctcga cccgccattc aacagccagc gcacctacaa cctcatttac aagcagctca
     4681 ccgggctccc gcttcccgag caggaggaag cgttctgcga tgct
//
LOCUS       DASYRV010000202         2815 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_285999, whole genome shotgun sequence.
ACCESSION   DASYRV010000202 DASYRV010000000
VERSION     DASYRV010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2815
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_285999"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..304)
                     /locus_tag="VGQ24_05145"
     CDS             complement(<1..304)
                     /locus_tag="VGQ24_05145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454251.1"
                     /translation="MIIRRIAGSYRDPSGHVFDAGTHVLRSVRPPAAAEFDQVKQTGL
                     LDRLVAEGVLLPFEVVDRRLLAEQEPDAVSVLRHPRLDFISHPYEWSFRGLRAAALL"
     gene            complement(294..578)
                     /locus_tag="VGQ24_05150"
     CDS             complement(294..578)
                     /locus_tag="VGQ24_05150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454252.1"
                     /translation="MQARTNPDQAGPIVIPTNSPRVLPIRVVRGIGVLLVILLLPPPL
                     HAQYLDPGSGSILIQVLLGGVVGLAAILKLYWHKIRGILPGAKRAVRHDN"
     gene            complement(718..1821)
                     /locus_tag="VGQ24_05155"
     CDS             complement(718..1821)
                     /locus_tag="VGQ24_05155"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8454253.1"
                     /translation="MRHLRVLHVIQNLNYGGMERLLADLVLRADPAEFEPHVLVLQYL
                     GRFARELEGRAALHVSPPLPKWSLVCPRLLARQLRSIAPDVVHSHSGVWLKTARAAHA
                     AGVPRLIHTEHGRASPDPLKARLLDGLASRYTDVVVAVSEVLAQQLEATVVRGRAPIQ
                     TIPNGVDTEHYRPRADTGRLRAELGLSADTPIIGSIGRLEAIKGYDVMIAAFANLPAH
                     SDASFSPPHLVVAGDGAERAQLEAMAARLGAADRVHWLGWRDDPIDLFSAFTIFTMAS
                     RSEGTSVSLLEAMSSGLCPVVTQVGGNSAVLGGELRHRLVPTERPEALAMAWRDALGH
                     PDRRESDAATARRRVVEAFGISTMVRSYEALYR"
     gene            complement(1821..>2815)
                     /locus_tag="VGQ24_05160"
     CDS             complement(1821..>2815)
                     /locus_tag="VGQ24_05160"
                     /inference="COORDINATES: protein motif:HMM:NF026968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEV8454254.1"
                     /translation="QRETQRRQIAVVLPITDAAMLALLPIRQQLAPAIIPFPELDIYQ
                     RVADKALVLEEARAVGFEVPEQMELARPGALLELGSLRFPLVLKPHRSVVATSDSART
                     VKLAVSHVADAAALERCLDTLPPEAFPVLLQQRIVGPGLGFFLLLWKQRRLAGFAHRR
                     LLEKPPSGGVSVRCESVAAEPGLLDRAERLLTRLGWQGVAMVECKQDLATGRVYLMEV
                     NGRFWGSLQLAIDSGVDFPTMLVRAAQGEPVASVADYRIGVRMRRWWGEVDHLVTRLR
                     RSDRSLGVPPDVPGRATVLARVLLAPLAGVRGEVLRWDDPLPFLRETLAWFRRA"
BASE COUNT          548 a          960 c          874 g          433 t
ORIGIN      
        1 ggaggagggc agcagcccgg agcccgcgga aggaccactc gtaggggtga gagatgaagt
       61 ccagacgggg atgccgcaag acagagacgg catccggctc ctgctccgcc aggagccggc
      121 gatccactac ttcaaaaggg agaagaacac cctcggccac cagacggtcc aataggccgg
      181 tctgtttgac ctggtcgaac tctgcggccg ccggtggccg caccgagcga agaacatggg
      241 taccggcatc gaaaacgtgc cccgatggat cgcggtatga gcccgcgatc cgcctaatta
      301 tcatgccgaa cggccctctt ggcgcccggc agaatccctc ggatcttgtg ccaatacaac
      361 ttgagaatgg cggccaagcc caccacccca cccaacagca cctggatcag gatgctgccg
      421 ctgccgggat ccaggtattg cgcgtgcagc ggcggaggca acaacaggat caccagcagg
      481 acaccgatgc cgcgaactac ccgaattggc aggaccctgg ggctgtttgt aggaatcacg
      541 attggtccag cctgatccgg gttcgtccgc gcctgcatgt aacattctcg taaagaggga
      601 ctctcaaagt atgacaatgc ggtttttcgg caagaccgcc ccttggggtg tctaaatatc
      661 gaccacaatt gtctaaaagc agcgtttaga aggtatgcgg aaggccaccc atcaccctta
      721 tcggtagagt gcctcgtagc tgcgcaccat cgtactgatc ccaaatgctt ccactacccg
      781 ccgccgggcg gtagcggcat cggattcccg acgatccgga tggcccagcg catcgcgcca
      841 cgccatggcc aatgcctcgg ggcgttcggt cggcaccagt cggtgccgta actcgccgcc
      901 gagcaccgcg ctgttgcccc ctacttgcgt cacgaccggg cacagtccgc tgctcatggc
      961 ctcgagcagg ctcaccgagg tgccttcgct acgcgaggcc atcgtaaaaa tggtgaacgc
     1021 ggagaacagg tcgatcggat cgtcccgcca cccgagccag tgcacccggt cggctgcgcc
     1081 gagccgcgcc gccattgcct cgagctgcgc ccgctcggca ccatccccgg ccaccacgag
     1141 gtgtggcggc gaaaacgagg cgtcgctatg cgccggcaag ttggcaaacg cggcgatcat
     1201 cacgtcgtat cccttgattg cctccagccg tccgatgctc ccgatgatcg gcgtgtcggc
     1261 gctgaggccg agctcggctc ggagccgacc ggtgtcggcc ctgggccggt agtgttccgt
     1321 gtccactcca ttggggatcg tctggatggg cgcgcggccc cgcacgacag tggcttcgag
     1381 ctgctgcgcc agcacctcgg acacagcaac cacgacgtcg gtgtagcggg atgcaaggcc
     1441 gtcgagcagc cgggccttga ggggatccgg cgacgcccgg ccatgctccg tgtgaatgag
     1501 gcgggggacg cctgcagcat gagcagcccg tgcggtctta agccagacac cgctatggct
     1561 atgcaccacg tccggggcga tcgagcggag ctgtcgagcc agcaaacggg gacacaccag
     1621 cgaccacttc ggcagcggtg gtgaaacgtg cagcgccgcg cgcccttcca gctcgcgggc
     1681 aaatctcccc aggtattgga gcaccagcac gtgtggctcg aactcggctg gatccgcccg
     1741 cagtaccagg tcggccaaca agcgctccat ccccccgtaa ttcaggttct ggatcacgtg
     1801 cagcacccgg aggtggcgca tcaggcgcgg cggaaccagg ccagcgtttc gcggagaaag
     1861 gggagcggat cgtcccaccg caacacctct ccacgcacac ccgcgagcgg agccaacaag
     1921 accctcgcca agaccgttgc ccggccgggc acgtcgggcg gcacccccag cgagcggtcg
     1981 gatcgacgga gtcgagtcac caggtggtcc acttctcccc accagcgtcg cattcgcacc
     2041 ccaatccggt agtctgccac actggccacc ggctccccct gcgccgctcg caccagcatt
     2101 gtcggaaagt ccacgccgga atcgatggca agttgtagcg agccccagaa ccgcccattg
     2161 acctccatca gatacacgcg tccagtcgcc agatcctgct tgcattccac cattgccacg
     2221 ccttgccacc ccaagcgggt cagcaggcgc tcagcccgat cgagcaaccc cggctctgcc
     2281 gccacactct cgcagcgaac cgacacacct ccggacggcg gcttctcgag cagccggcga
     2341 tgcgcgaacc cggcgagccg ccgttgcttc cagagaagga gaaagaatcc cagccctggc
     2401 ccgacgattc gctgttggag cagaaccgga aatgcttccg gcggcagcgt gtcgagacac
     2461 cgctccagcg ccgcggcatc agcaacatgc gacactgcga gcttgaccgt cctcgcacta
     2521 tccgacgtcg ccacgacgga ccgatgcggc ttcagcacca gcgggaaccg gagcgaaccg
     2581 agctcgagca gggctcccgg ccgggccagc tccatctgtt cggggacctc gaagccgacc
     2641 gcgcgagcct cttccagcac gagggctttg tcggcgacgc gctgatagat gtcgagctcg
     2701 ggaaacggga tgatcgcggg cgccaattgc tggcggatcg gcagcaaggc gagcatggcg
     2761 gcgtcggtga tgggaagcac gaccgcgatt tgcctgcgtt gggtctcgcg ctgta
//
LOCUS       DASYRV010000203         4020 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2532674, whole genome shotgun sequence.
ACCESSION   DASYRV010000203 DASYRV010000000
VERSION     DASYRV010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4020
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2532674"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..422)
                     /locus_tag="VGQ24_05165"
     CDS             complement(72..422)
                     /locus_tag="VGQ24_05165"
                     /inference="COORDINATES: protein motif:HMM:NF012339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEV8454255.1"
                     /translation="MRGRLLWCVSSETARSSGGLMELLINGARREVNAPPDMPLLWVL
                     RDLLGLTGTKFGCGIAQCGACTVHLDGRPLRSCITPVAAVEGKQIVTIEGLSPDGSHP
                     VQRAWAELDVVQCG"
     gene            501..3695
                     /locus_tag="VGQ24_05170"
     CDS             501..3695
                     /locus_tag="VGQ24_05170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012874565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:1068..1070,aa:Sec)
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEV8454256.1"
                     /translation="MELSRRDFLRTSLGSGTALGSLVSLGASLAPAEARAQQLRIEQA
                     NTTPSVCPYCSVGCATLVHTIAGQIVNIEGDPRSPHNEGTLCPKGAAIYQLHKNPNRA
                     TRVLHRKPGDTQWEEVELDWAMDRVAALVKQTRDESFVERLADGKLVNHTTAIFSLGG
                     ATLDNEWNHLQQKLMRGLGIVAIENQARIUHSSSVPGLGTRLGRGAATTFPRNLEHSD
                     CIVIEGSNMAECHPVAFRWPLKAKLAGAKLIHVDPRFTRTSAMADLYAPVRAGTDIAF
                     LGGLINYVLHSPRWNTDPFFQEYVAHYTNAATLVREDFADTEDLNGVFSGLLQYTGGV
                     REWPFNGFIGEYNRSTWQYARQAERSPEPHGAPPARGATREPFDQLIRSLKRPAALKD
                     PTLSDPRCVLQIVKRHFSRYTPEMVEEVTGCPRATFLQVAETVLANSGRERTTAWAYA
                     VGWTQHTYGPQMIGCCALLQLLLGNIGRPGGGILALRGHASIQGSTDVPTLYHSIHGY
                     LQAPSALARHATLRDYLAAEAQPTGYWANMPKFLVSYLKSMYGDAAQPENDFGWDWHP
                     KIAGDHSHLPMFVAMAEGQVKGMLCIGQNPATSLNASLERKALRKLDWLVVKDNFLTE
                     TATHWYKAPEVERGEVRPEDIPTEVFFFPSAQVAETEGSFTNTQRMLQWHFKAAEAPG
                     DCRSDPWFTYQLGVRLKRLYAGSTLPRDQGFQHLVWDFEPDQPGSVPGEPAIEKVLRE
                     INGFQTGEPATQLAGFSELKDDGSTTCASWIYCGVFPAPDQNLAKRKQADPPDHVGAQ
                     LNWGWAWPANRRLLYNRASADLDGNPWSERKRWTWWDGKRWTGVDTPDFPTTKSPRVL
                     ANPAALGLDAHSGASPFIMKPDGVGWLFNPAGLLDGPLPTHYEPAESPVANALYRQQS
                     SPVLKRWVREDNPLVAAGDARFPYVITTYRLTEHYLAGAMSRWNPWLAELMPELFIEL
                     SPELAAEKGISNTGWVRITTPRGSIRAKALVTRRLRPFRIGGKLVHQVGMPWHWGWQG
                     VVTGDVVNELTAFVADPNVSIHEGKAFVCNVARD"
     gene            3695..>4020
                     /locus_tag="VGQ24_05175"
     CDS             3695..>4020
                     /locus_tag="VGQ24_05175"
                     /inference="COORDINATES: protein motif:HMM:NF024585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEV8454257.1"
                     /translation="MPEPMGFYTDTTVCIGCKACEVACKAWNQLPATDGGIAELSGQS
                     YDNTLKLDGIHWRHVKFIEQFAEDRSEGRWLMLSDVCKHCVQAPCLEVCPTGAIIRTE
                     FDTVVI"
BASE COUNT          738 a         1343 c         1270 g          669 t
ORIGIN      
        1 atgtcggcat ctgtcggcat gggcttcctg gcgagcaacg ccgcggccga catgatctgg
       61 ccggactggc actagccgca ctgcaccacg tccagctcgg cccaggcacg ctgcacggga
      121 tggctgccgt caggggacag cccttcgatg gtgacgatct gcttcccctc caccgccgcg
      181 accggcgtaa tgcaggagcg cagcgggcgg ccgtccagat gcacggtgca cgccccgcac
      241 tgggcgattc cacaaccaaa cttggtgccg gtgaggccga gcagatcccg cagcacccag
      301 aggaggggca tgtcgggtgg cgcgttcact tcccgtcggg cgccgttgat caggagctcc
      361 atgagtcctc ccgaggagcg agccgtctcg ctggagacgc accagaggag cctgcctcgc
      421 accggcctcc acgggccccg ctttgcaggt ccggagcaag caaccttatc ttcgggagca
      481 gccttcaagg agcgcgtccc atggagctct cccgccgcga tttcctccgc acctctctgg
      541 gctccggtac cgcgctcggc tccctcgtca gcctgggagc cagtctggct cccgccgaag
      601 cccgggctca gcagctccgg atcgagcagg ccaacacgac acccagtgtg tgtccctact
      661 gctcggtcgg ctgtgcgacg ctcgttcata ccatcgctgg ccagatcgtc aacatcgaag
      721 gcgacccgcg gagcccccac aacgaaggca ccctctgccc caagggggcc gcgatctatc
      781 agctccacaa gaaccccaac cgggcgacca gggtcctgca ccgcaagccg ggcgacacgc
      841 aatgggagga ggtcgagctc gactgggcca tggaccgggt cgccgcgctg gtcaaacaga
      901 cgcgcgacga gagctttgtg gagcggctgg ccgacggcaa gctggtgaat cacactacgg
      961 cgatcttttc gctgggcggc gccacgctcg acaacgaatg gaatcacctg caacagaagt
     1021 tgatgcgcgg gttaggcatc gtcgccatcg agaatcaggc caggatatga cacagctcta
     1081 gcgtccccgg tctggggacc cggctcggtc gtggcgcggc gaccaccttc ccgcgcaacc
     1141 tggagcactc ggactgcatc gtgatcgagg gctccaacat ggcggagtgc catcccgtgg
     1201 ccttccgctg gcccctgaag gccaagctcg ccggcgccaa gcttattcac gtcgaccctc
     1261 gttttacccg taccagcgcg atggccgatc tgtacgcgcc cgtccgcgcc ggaaccgaca
     1321 tcgcgttcct cggcgggctc atcaactatg tgctgcacag cccgcgttgg aataccgacc
     1381 cgtttttcca ggaatacgtc gcccattaca ccaatgcggc gacgctcgtg cgcgaagact
     1441 ttgcggatac cgaagatttg aatggggtat tctcaggcct gctgcagtac accggtggcg
     1501 tcagggaatg gcctttcaac gggttcatcg gcgaatacaa ccggagcacc tggcaatatg
     1561 cccggcaggc ggagcgctcc ccggagccgc acggcgctcc cccagcccga ggagccaccc
     1621 gggaaccgtt cgaccagctg atccgttcac tcaagcgccc ggccgctctg aaggatccga
     1681 cgctcagcga ccctcgttgc gtcctgcaga tcgtcaagcg gcacttcagc cgctacaccc
     1741 ccgaaatggt ggaggaggtc accggctgcc cgcgggcaac gttcctccag gtggccgaga
     1801 cggttctggc caactcgggc cgggagcgga ccacggcatg ggcctacgcg gtcggctgga
     1861 cgcagcacac ctacgggccg cagatgatcg gctgctgcgc gctgctgcag ctcctgcttg
     1921 ggaacattgg ccgtcccggc gggggaatcc tggcgctgcg cggccacgcc tcgattcagg
     1981 gctcgaccga tgtgccgacc ctgtatcaca gcattcacgg ctatctgcag gcgccctccg
     2041 cgctcgcccg gcacgccacg ttgcgcgact acctcgcggc cgaagcccag cccaccggtt
     2101 actgggcgaa catgccgaag ttcctggttt cctacctcaa gtcgatgtac ggcgatgcgg
     2161 cgcagccgga gaatgatttc ggctgggact ggcatcccaa gattgcggga gaccattcgc
     2221 atctgccgat gttcgtcgcc atggccgaag ggcaggtcaa agggatgctc tgcatcggtc
     2281 aaaaccccgc gacgtctctc aacgcgagtc tcgagcgcaa agcgctgcgg aagctcgact
     2341 ggctcgtcgt caaggacaat tttctcaccg aaaccgcgac ccactggtac aaggcgccgg
     2401 aagtcgaacg cggtgaggta aggccggagg acatcccgac cgaggtcttt ttcttcccct
     2461 cggcgcaggt ggccgagacg gagggaagtt ttaccaatac ccagcggatg ctgcagtggc
     2521 atttcaaagc cgccgaagcg cccggtgatt gtcgctccga cccgtggttc acctatcagc
     2581 tcggcgtcag actcaaacgt ctctatgcgg ggagcaccct cccgcgcgac caggggttcc
     2641 agcatctggt ctgggacttc gagcctgatc agccgggatc ggttccaggg gagccagcga
     2701 tcgaaaaagt cctgcgcgag atcaatgggt tccagaccgg agaacccgcc acccagctcg
     2761 ccgggttcag cgagctcaag gacgatggtt cgacgacgtg cgcctcctgg atctactgcg
     2821 gggttttccc cgccccggac cagaacctcg cgaagcgcaa gcaggcggat ccgccggacc
     2881 acgtcggagc ccagctcaat tggggctggg cctggccggc caatcgccgc ctgctctaca
     2941 atcgcgcgtc agcggatctc gacggcaacc cgtggagcga gcggaaaaga tggacctggt
     3001 gggacggcaa gcggtggacc ggcgtcgata cgccggattt cccaacgacc aagtcgccca
     3061 gagtcctggc caacccggca gccctcggcc tcgacgctca ttcgggcgcc agcccgttca
     3121 tcatgaagcc ggatggagtc ggctggctct tcaaccctgc gggtttgctg gatggtccgc
     3181 tcccgaccca ttacgagccc gcggaatccc cagtggcgaa tgcgctgtac cggcagcaaa
     3241 gctctcccgt cctcaagcgc tgggtgcggg aagacaaccc gctggtcgca gcgggcgatg
     3301 cgcgcttccc ttatgtgatc accacctacc gcctgacgga gcactatctg gcaggcgcca
     3361 tgagtcgctg gaacccgtgg cttgccgagc tcatgcccga gctgttcatc gagctcagtc
     3421 ccgagctcgc ggccgagaaa gggatcagca acaccggatg ggtgcggatc accacgccgc
     3481 gcgggtcgat tcgcgccaaa gcgctggtaa cccggcggct gcgacccttc cggatcggcg
     3541 gcaagctcgt tcatcaggtc ggtatgccgt ggcattgggg ctggcagggg gtggtcacgg
     3601 gcgacgtggt gaacgaattg accgccttcg tcgctgaccc caacgtgagc attcacgaag
     3661 gcaaggcctt cgtctgcaac gtcgcgaggg actgatgccg gagccgatgg ggttctacac
     3721 cgacacgacc gtctgcatcg gatgcaaggc gtgcgaggtg gcctgtaagg cgtggaatca
     3781 attgccggcc accgacggcg gcatcgccga gctctcggga cagagctacg acaacacgct
     3841 gaagctggac ggcattcact ggcgccacgt caagttcatc gagcagtttg cggaagatcg
     3901 cagcgagggc cgctggctta tgctgagcga tgtgtgcaag cactgcgttc aggcgccttg
     3961 cctcgaggtc tgtccgaccg gagcgatcat ccggaccgag ttcgacaccg tggtgatcaa
//
LOCUS       DASYRV010000204        30791 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_492711, whole genome shotgun sequence.
ACCESSION   DASYRV010000204 DASYRV010000000
VERSION     DASYRV010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 30791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30791
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_492711"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..982
                     /locus_tag="VGQ24_05180"
     CDS             <1..982
                     /locus_tag="VGQ24_05180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454258.1"
                     /translation="TASTIVDIANRILEAAGRSLGRKWKDSISDFVERLGLTLTLTAD
                     PTTGLIRPSLDIRLRSAPLEEQRASLSKTLDSIDGLAGARQMPVGIVLDEFQEIQRFG
                     GDTAEWHLRGIIQHHQNVSYILAGSQAHIIERMLDKGRAFYGLADQLQLGAIDPAHLS
                     AWIDDRMTQGGVKAVGVGAAIIARAGPRTRDIVQVARQCFDNCRTTGRADEAAVVQAY
                     DDVVAEQEALFQSMWNGLTGQQQNVLRAVAADLDGLTTKASIKQFALTSSGAASNSGR
                     AMIEAGYLVKSSSKTGYSFETPFFGYWVKKETMADLGASIPIRPEDQAAR"
     gene            complement(1068..2510)
                     /locus_tag="VGQ24_05185"
     CDS             complement(1068..2510)
                     /locus_tag="VGQ24_05185"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEV8454259.1"
                     /translation="MRKAFVGLMAGVQLLAAGTATAQSPAAPQSPAARQSPAALQSPA
                     APPASGVEASRAPSADGSGQLVFWQRLGDTTLARLTAEALRANRDVVVAEARVRQARA
                     ARANAKLDLAPTITVAGGYTRQRSSSAAFGLAIPERDLWDAGLRADWELDVFGRVRRT
                     LRGHTALAQAAGEDVRDVQRVIAAELASAYFDLRGAQDQLDVARRNAENQRRTLQLTR
                     DRLDAGRGNAFDTERAQAQLSTTLASVPTLESRTAAAGHRIGVLIGRDPTAVGAELAG
                     PCALPALPDVAPGQVDSLIRSRPDVRAAERRLAAETAFVGAAKADYLPRFSVGGTAGF
                     TSTGFDSLGRTGSGRFAVGPVISWPAFNLGRVKAGVDAARALEAEARARQEQTVLLAR
                     EEVETALVAYAKARERLTQLTEAADASGRAAELARIRFEGGVADFLQVLDAERSLLAT
                     QDQLAQGRTDAVTALVAVYRALGGGEPPAG"
     gene            complement(2503..5607)
                     /locus_tag="VGQ24_05190"
     CDS             complement(2503..5607)
                     /locus_tag="VGQ24_05190"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEV8454260.1"
                     /translation="MSDTQRRGITDLFIRHPVIALVVNLVIVLMGWRALSSLPIQQYP
                     KIESSSVIITTVYYGASAETVRGFLTTPIERTVSAIGGVDYIESTSRAGVSTVTVRLK
                     LNYSSTAALAEVTARLQQVRSELPPDAEPPVVNIQRTDRPYASFYLGFTSTDRTVPEV
                     TDWLTRTLQPQLATIEGVQRVEIIGEPIAMRVWIDPERLAAVNLAPGDVYAALQRNNY
                     LAAVGQTKGNLVQVNLLANTDLRTPEEFENLVVTERAGAVVRLRDVAKVELGAEEAQL
                     LAKYNTQAAVYLGVWPLPGANEISVGDRLVAEMNRIRPTLPKDVEMRLVWDGTVFMRD
                     ALHEISKTLLETMLIVALVVFLFLGSLRTMLVPLVAMPISLVGAGIFMAAFGFSLNLL
                     TILAIVLSVGLVVDDAIVVVENIERHVRQGRSRLDAALLGARELIGPIIAMTITLAAV
                     YTPIAFQGGLTGSLFLEFAITLAAAVVVSGIVAVTLSPMMSSRLVHAEGKEGRLTTLV
                     NRGFDRVRQLYGRILDGALGMRWAIVAAALFVTVAAWPLYTFSRRELAPVEDQSHISL
                     FFESAPDATLAATNRASLDVVKAVNAFPENRFMWSLTANWGGFGGFVAKDWHQRKRST
                     EQMYGQVYGAVSQVPGLRVFPRLDPPLPTPGQYDVELLLESDLPPEQLLESVGAVVGA
                     GWQSGKFLYVDTDLKIDLPEARVVIDRDQVADLGLDLATVGRELGTLLGGGYVNRFNY
                     FDRSYKVIPQIGEKDRATVGPLLDLKIKTPSGELVPVSTFTRIETHPAPRTLNRFGQR
                     NAVRVFGGVKPGITKDEGLKVLEQAAAASAPPGMTVDYAGESRQIRREGGALVVTLGF
                     AVILIYLVLAAQFQSFRDPLIVLLGSVPLAIAGALVFSFLDLTTINIYSQVGLITLVG
                     LIAKNGILIVEFANRLQERGHARLAAIREASLTRLRPVLMTTAATIFGHFPLVLANGP
                     GSAARNSIGTILVAGMAVGTVFTLFVVPVFYSLIAADHRAVAVETEPEPSGAFPVLGE
                     VAHA"
     gene            complement(5607..6737)
                     /locus_tag="VGQ24_05195"
     CDS             complement(5607..6737)
                     /locus_tag="VGQ24_05195"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEV8454261.1"
                     /translation="MQRSKIIRLPGWIGATALLVTVAGSGGILAAWKSSSLERSAHAS
                     DGMPEPSEAVTVAAAEPREHQPSTSAVGTVLALRSVTLRNELAGTVRHVMLTPGQVVE
                     PGVVLVGLDVSVEAASLKAEEARATLAETTLLRLQRLLEHNAVSVEEVDRARAERDVA
                     LAEIARNKAVIERKTIRAPFRARVGLSDVHPGQYLPEGTLLTTLQGVDAAANVDFTVA
                     QDVAQGLHVGDSVIVTAGSASTLTTARIVAIDAKVDPTTRNAMVRARMKGDVLIAGPG
                     ASVRVRVPTGGFTEAVAIPVSALRKGPDGDHVFVVSPDEHGKARAHLRLVQAGEVLGD
                     EVLVVGGLRPGEQVAASGSFKLREGVLVSPAGPPAAAGKGGR"
     gene            complement(6935..7267)
                     /locus_tag="VGQ24_05200"
     CDS             complement(6935..7267)
                     /locus_tag="VGQ24_05200"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEV8454262.1"
                     /translation="MPEPKSLLTAGQFDRIAKALADPRRFALLEAIASTEEYSCQQLC
                     RDFPVTKATISHHIKELVRAGLVETDRHGQYMDYRVRREVLAAYSAELLARTAPGRHR
                     QFLSHSME"
     gene            7410..9884
                     /locus_tag="VGQ24_05205"
     CDS             7410..9884
                     /locus_tag="VGQ24_05205"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADOP family duplicated permease"
                     /protein_id="HEV8454263.1"
                     /translation="MRLLLRSLLRSPALSIGVTATLALGVGALTVTFAVVDAALIRQP
                     PFQDAGRITMLYLVRNPIGEPARKERWSFPRFQLLQASQRSFERVASYSNPTLTLSGE
                     DDAELVHGEMVSPGYFPLLRARAVRGRVLAFADDDVANPSPVVVLSHALWSRRFASDP
                     GMVGRAVRINGLMLTVVGVLPEGFHGLSGSADIWTPTTMAPRLTYADYVRTNQNFISV
                     VGRLRRGVSLEGARAELAVLGATINRALPSDPDNPAERVGATAVTINEARVDRTVRRS
                     LAVLFTAVLLLLLLGCANVTNLLLGRAATRRREAAVRLALGSGAGRLFRHLLAEHLVL
                     ALPGALIGVLAAWRLTLLVTPPTNAWAARNFYGSLAAFDTPGFGPSEAAFGVALALLA
                     ALLVAIPPALSAFRLDLQSEIKSGSRGIAGGAITLRRPTVRGVLVAVEASLAVLLVVA
                     AGLLIDSFQRMRRTELGVDTSGILTFWVIPSEARVPPGGAAAWVSRLLEALARVPGVV
                     SATVDGGAPLAGTARSTLYIAGRPAPPPHQAPPVLRHYVAPDHFRTLGIPVRRGRVFG
                     PGDVAGAPRVTVISETAARRFWPDEEPIGKRVWFGGGSSFSSPDSSAEIVGIVGDVMY
                     EPLDRQPNKASFYTPYAQFTYASRMVFLRTAGDPLSLVPGVRKALRGVDPDVAMRDVQ
                     TLDQVVSGSWARHRFEAIVFGGFGAAALLLAASGIFAVLAYAVADRTREFGVRIALGA
                     GAADVMRLVLREGLAFPTVGMLLGVMASFAATGAMRSSLYEISPLEPVVYAETIGLLL
                     IAAAAACLIPAWRAARADPMEAMRAE"
     gene            complement(10076..10714)
                     /locus_tag="VGQ24_05210"
     CDS             complement(10076..10714)
                     /locus_tag="VGQ24_05210"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEV8454264.1"
                     /translation="MSIRLVLADDHPVVLHGLEHLLRLEPGFEIVARCTDGVEALEAV
                     RRHRPDILVLDIRMPRKGGLEVLREIREEKLPTKVVILAAAMQKGEALEALRLGVRGV
                     VLKEFAPKMLIQCVRQVHAGKQWIERETHCGALELLLRREAAQQELAEVLTPRELELM
                     RMSTTGLSNRQMAAQLGITEGTIKIHLHNIYHKLKIYSRLELVLLAQSKGLV"
     gene            complement(10716..11021)
                     /locus_tag="VGQ24_05215"
     CDS             complement(10716..11021)
                     /locus_tag="VGQ24_05215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454265.1"
                     /translation="MRYGIFRLVQEPLVNVARHAQATKARTVLGGGYREVRLVVADNG
                     HGFPFRGCYDHSALKALHLGPASLRERLSALGGTLDIDSTTSGARLEIRLPLARAVA"
     gene            complement(11575..13452)
                     /locus_tag="VGQ24_05220"
     CDS             complement(11575..13452)
                     /locus_tag="VGQ24_05220"
                     /inference="COORDINATES: protein motif:HMM:NF019350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEV8454266.1"
                     /translation="MEAPRPSIRPDRDRPFAAEAAADRIPVEPPGSIDEAGAPARHAR
                     GRAPGSARSDNIHRVLTPPGYIPRLRGARLIAAGRVVLAAFGLFAILIDPYTPARYAD
                     ATYLLLSLYVLYAVLLAFIVSRTPTSTRRGLITHGVDLTLFSVLQFLTEGSVSPFFAY
                     FTFALVSATLRWRWRGAVWTTVVVLAVLNLQALYSAEAGSSADFEIHRLVIRDAYLAV
                     VGGLLAYFGAYHDRLRDDLSRLSAWPSVSSMDPQDFIGALLRHTAGILRMPRVLLVWD
                     DPDEPWCRVVLWSAKGLQSRQEAPTTYQPLVAEALAGRPFICTDASAADPVVLQASGQ
                     GAHHWRGVPLHGGFRSRFEVRAVLYVPVRGRQFEGHLLALDRVKLTEDDLEVARVVGR
                     LIADSMDQLLLMRQRDDAAAITERVHLAGDLHDGVLQSLTAVGFQLESVSRRLETDPP
                     GARKELDELGHLLAEEHRDLRFFIRKLRPALLGVLSSGGELELRLGELVKGLIDVWNL
                     PITLEIAEQLPDMQASMRYEIYRLVQEALVNVARHAEATEARVVLGGGYREVRLVVAD
                     NGHGFRFRGCYDHSALKALHLGPASLRERVSALGGTLDIDSTTSGARLEIRLPLAHAV
                     S"
     gene            13975..15120
                     /locus_tag="VGQ24_05225"
     CDS             13975..15120
                     /locus_tag="VGQ24_05225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454267.1"
                     /translation="MTRRWLTAGALSLFAIACTAGPEATESPTGPDLAKASQSGTTLG
                     AYKTLEACYEGTNPFEVKFFGSIVINRLSATGTKDLTVLDFIQNMSAGQAKVADGAAF
                     GGLVNSAISALATFNNIQITKANGNPLTEIAGCGGPDCDPNEALAYEATGPFTVTAGQ
                     IYRNTANITITNHSGWLAGSNNCPTGDPRIFDGGCPFGPSTKFSLTVPQDGFPACGGL
                     GCTLTQGYWKTHSSYGPASADPGWFNIGDVDGDATSEGPDELFFGTGLTWYQMFNTTP
                     QFGNAYVILAHQYEAAVLNVANGASSTAIAPDLALAACYLAAHTTTDAGPANSRQGLT
                     DVDSACDVDLTGDSNAMIALATTLDTYNNGDLGPPHCSNPDEPDPTP"
     gene            complement(15123..16598)
                     /locus_tag="VGQ24_05230"
     CDS             complement(15123..16598)
                     /locus_tag="VGQ24_05230"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEV8454268.1"
                     /translation="MLKLNGTVQGSLGVRLGLAAVALGLVGCADGPVTAGPSGQAPLA
                     AMSLAQGLGSVVIPGQYIVQFKDEVRDVPGLARQLVAHSGGTLGFTYTAAIKGFSAQL
                     SLEAASALQHNTNVASIEQDQIARVSEIETNATWGLDRIDQNLLPLDGTYSYAATGAG
                     VNVYIIDTGIRTTHTEFGGRAFGVFSSVPDGNGTNDCNGHGTHVAGTVGGTTYGVAKG
                     VRLYAVRVLDCSGSGSYSGVIAGIDWVAQNRVLPAVANMSLGGSLSSTFNAAVQNSIK
                     AGVTYAVAAGNSSADACSYSPASTPDALTVGASTASDARASYSNTGICVDLFAPGSSI
                     TSAWNTDDGATKTISGTSMATPHVAGTAALYLQANPTALPAAVAWVITTTATYGVLSG
                     LGSETPNLLLYAGSVVTNPPPPPPPTDLPPTASFTVRCSGRNGCSFDGTGSTDDQQIV
                     SYTWTFGDGAAAVTTSPKVTHKYAQSAWYYVTLTVFVSYPR"
     gene            complement(17286..19007)
                     /locus_tag="VGQ24_05235"
     CDS             complement(17286..19007)
                     /locus_tag="VGQ24_05235"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEV8454269.1"
                     /translation="MSTRRDFLAATGAAVVAGTGLASGTGSGSAGRGLPDAFRSGATG
                     GQSRAGPDLVLLGGAVHTMDVAVPKAEAFAVTGGRFVAVGTTEEIRRLATPTTEVIDA
                     RGTTVFPGFIDAHCHPDGVDELTGVNVNLPSIADIQAAMKKRAAATPAELWVTGVMYD
                     DTKLSDGRPITRRDLDQAVPDHPAMVQHRGGHTLVANSKAFALAGITAAAPDPANGKI
                     YRENGELTGKVAESAQDLFYGVGKRPEITPELRRRAVAALSAAMAKAGITSVHSAGGS
                     RADLTALEDAIAAGELRFRMYFFPSRQLYPGFRASGIRTGFGDEVLRIGPVKFVADGS
                     ASERTMRMSTPYVGRPSDFGILTMSQQEIHDAVEEAHRGGWRVAIHANGDVTIDMVLN
                     AYERVQKLWPKPDVRHRIEHCTLVNPDLLRRIKAAGVIPAPFYTYVYYHGEKWAEYGE
                     EKVRWMFAHRSFLDSGIPVAPASDYMPGPYEPLMAIQSMVTRTDYKGRVWGGNQKITV
                     PEALRICTVNGAYASKEERTKGAIVPGMLADFAMLARDPHTEEPARIKDIPVLRTVLG
                     GRTTHHA"
     gene            complement(19004..20257)
                     /locus_tag="VGQ24_05240"
     CDS             complement(19004..20257)
                     /locus_tag="VGQ24_05240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEV8454270.1"
                     /translation="MSPVPAPSRLGVGFIGSGFNARFHMLSWPGVRDADVLGVWSPNP
                     KKAAGAAAYARGLDIGACRPYQSIREMVSDPAIHAIWLCGPNQARIANVEEVVDTIAR
                     GRGKLIGIACEKPLARNVAEARRVVQLVKSVRLKHGYLENQAFSPQVERGRELIWARG
                     AALTGRPYLARAAEEHSGPHMPWFWRGKLQGGGVLNDMMCHSALVVRHLLTKPGEPLA
                     TVRPVRVTGHIASLKWSQPEYARRLRKMMGPSVNYRRQPSEDFASVTIEFRTEDGRTA
                     FGEATTSWSFVGAGLRLSAELLGPEYSMAWNTLDTGLKLFFSREVKGKAGEDLVEKQN
                     AEVGQMPVVAQEAVAYGYEAEDRHFTRVFLGKEKPRLTFDDGLEVVKLLMTAYQSAEK
                     GKTLRFPPPGLDRFVPKVAKGTWRP"
     gene            complement(20254..20811)
                     /locus_tag="VGQ24_05245"
     CDS             complement(20254..20811)
                     /locus_tag="VGQ24_05245"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEV8454271.1"
                     /translation="MRSSTRAAAAAAALIVALVPSARAQAGGVIADLIKDVAQAEQKL
                     VGLAKAMPESTWTWRPGTGVRTVGEVFQHVAADNYFLPTAVGVAAPASTGIKAGDYKA
                     TQAFESRKATRDEAISDLERSLAHLKQAMQQTTAANLNESLTIFGMTMTRQQYWILAT
                     THLHEHLGQAIAYARSNGVVPPWSR"
     gene            complement(20880..22127)
                     /locus_tag="VGQ24_05250"
     CDS             complement(20880..22127)
                     /locus_tag="VGQ24_05250"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEV8454272.1"
                     /translation="MKVLVITAAFPPMRAGEADQALHFARHLADRGVEVHVLTTRGHL
                     ALPSFPFKVHPIMRDWSWWDLGRLARFLRWCNPDAVLLMYIGWIYHGHPMITFAPTIS
                     KLLRPRAVFVTQFANVTGALRKQRSFPTRFFRLGLKQLTGKPGVSYEYGTLLRDSDRV
                     IVLSDHHRAVLAELSPVIGGKSVLIPPPPIMAMAPPDEEARRDTRTALGLGPAEFLLA
                     YLGYIYEGKGIETLLKAFQIVSGRRGQVRLILVGGTLARADPDRPSYGQDLLELADRL
                     GIADRISWTGEYRWDSQDGSRYLRAADAFVLSMDVGVQLNNSSFAAAVAHGLPVVATR
                     SSRLEAPFVDRENVLLCPPRDPEMMAAAIEALLDDPALRERLSVGSRRFAEEWFSWTR
                     AIDRVMETVTGGPSPSPPRHQPS"
     gene            complement(22162..23109)
                     /locus_tag="VGQ24_05255"
     CDS             complement(22162..23109)
                     /locus_tag="VGQ24_05255"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HEV8454273.1"
                     /translation="MSLNFWSGRRVVVTGGAGFLGSHVVEKLAQRGCQEIVVPRSREY
                     DLRDRDAVIRLYRQSQPQLVIHLAAIVGGIGANRASPGRFFYDNAVMGIDLLEYARRS
                     AVEKFVAVGTVCAYPKSTPVPFRESDLWNGYPEETNAPYGLAKKMVLVQAQAYRQQYG
                     FNAIYLLPVNLYGPRDNFDLETGHVIPSLIRKCVEAKAQNAGHITLWGDGSPTREFLF
                     VEDAAEAILLAAEHYDGPEPVNLGSGEEITIRELAELIAAEVGFQGGIEWDTSKPNGQ
                     PRRCLEVTRARELFGFQAAQPFRAGMAKTIAWFLAHQRD"
     gene            complement(23147..25213)
                     /locus_tag="VGQ24_05260"
     CDS             complement(23147..25213)
                     /locus_tag="VGQ24_05260"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEV8454274.1"
                     /translation="MPEARAERVPAAAALSCLVIIGFWLRIHHLGNLGLIVDEGHQAL
                     AVNGILQHGYPVLPTGRTYAWNLVFIYLQSAAALVFGVNEFSLRLPGALFGVATIPMT
                     YWFGRTLFNAKAGLLAALLIALSVWEIEVSRYARAYTVYQFFYVLSLVAFYKGFIKGE
                     RRWQFLVPPLFVLTYMLTPLGATLLMAFLVPFFVDSTAARTKWTAVLCAGLTAGGCFL
                     YGRGIRFLDSRFSPLAMEGTAGGDLPFLERLRHAIKANFHTPETGLLRELYARDHRLF
                     LLLCGLLLLTVGVLFYLVYRDKSERVPGLFALPVIAACYLHQFALAAILFCLYLLISY
                     RNRASLTSAPYLVVYASAALTFRFWSAYAKLHPLPSFSFARYFWDFPKLHDYLLQWLV
                     QGWPRFSVVTAGGLLLLGHRFFQDRTRGTYLFPVALGLLLPLFASAIYWPYYVPRYFF
                     HLYPLLVVVFAFTLCALGTAVQSRASRPGPDGPRPPGPARRVVEAVALVFLAAVLSQD
                     IYPSQVLAIGNRSYTSPKDPIKASQSWELFQQDYQTPGRYVRAHLLPRDTVVVLGASH
                     VASIFYHYIGRVDYVLMLPHEVDLSSPGSFVLGTGKGLVYYMTGSAVLQDAPALEHWL
                     STVRTGRIWILADFQTAPPDLRRRFRPDGVFTGQDRQTEVYLIDREIRGTAGLPSRGA
                     EGKPRG"
     gene            25616..26146
                     /locus_tag="VGQ24_05265"
     CDS             25616..26146
                     /locus_tag="VGQ24_05265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454275.1"
                     /translation="MNPSRDPGAFARSVPERGFLATLHIALSTLWSALLDNLDEWGSR
                     TNTSGNTFIALRAIQSENKAHRSPDSTPSRFRIIRNAFRAVGGIRSHCSARTRRVGRR
                     TMEVRLRDDPPALVILDGFTAITRLRHRGALGGLLAYRSTRELAISGARFPTPVEAVR
                     RRDLRVPAVPRAAITP"
     gene            26143..26970
                     /locus_tag="VGQ24_05270"
     CDS             26143..26970
                     /locus_tag="VGQ24_05270"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8454276.1"
                     /translation="MSVGAPVVVEPPAGLFRIGLRSLWEYRELLYFLVWRDLKVRYKQ
                     TAIGVGWAVLQPLTAMAIFTAVFGHFARVPSDGLPYPVFVYCALLPWNYFATALNRCI
                     SSVVGDANLISKIYFPRLLLPIAGPISGLADFTVPFVLLLGMIAWYGIALSWAVLTVP
                     LFLILAFLTALAVGLWLSALNVRYRDVGYTIPFLVQIWFFATPVVYPLSLVPEKYRLL
                     YGLNPMVGVVEGFRWALLGKARPELGLLAASVAAVTLLLVGGLVFFRNLEDQFADVV"
     gene            27004..28317
                     /locus_tag="VGQ24_05275"
     CDS             27004..28317
                     /locus_tag="VGQ24_05275"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEV8454277.1"
                     /translation="MAISVEHVSKRYRIGARKSRHDSLGSLLAAGAGALLRRGRRSVT
                     AAGGEADPGAERSRMGAEDGVWSLKDVSFDVPHGEALGIVGHNGAGKSTLLRILSRIT
                     MPTSGRAVLYARVGSLLEIGTGFHPELTGRENMYLSGAVLGMKRGEIDAKFDAIVDFA
                     EVERFLDTPVKRYSSGMYLRLAFAVAVHLEPEILIVDEVLAVGDARFQKKCLTRMQDV
                     RREGRTVLFVSHNLPTVTQLCKRALLLDHGRLVADGPAAQVIGAYVSPVRRTATEREW
                     GPADTPPGGDVARLRAVRLRSEDDEIAETVDIRRPFALEMEYDVLIGGAVLLPYVNLH
                     DEAGVFLFSAHDLDPDWEGRPRPAGRWLSVVQIPANLLAEGTHTVGFGLVTLDPVVNQ
                     FDERDVLSFRVVEPSPDGTARGGWVGPMDGVVRPALQWRTTLLPA"
     gene            28314..29687
                     /locus_tag="VGQ24_05280"
     CDS             28314..29687
                     /locus_tag="VGQ24_05280"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEV8454278.1"
                     /translation="MRILLVSNLYPPHYIGGYELRCAQVAEYLRLAGHETRVVTSFAN
                     LPGVPAGSLSQEATGEGTTPVERWLRYHTLDPLPAQRRRTLAMARSQLHEARRFNRLL
                     ADWRPDVVNWWNLEGLTKTILPLPAARGIPDVHWVEDTWLIREYGANGEKESLHWFDF
                     WRGRWTPPALRPALVAGLAVWERWVRREGIATRPFPNRPRHVCFVSEFMRLEHQRAGL
                     TWPSSSVIHGGVAAERFHLRRTPTEFAEGTLRLLYAGYVEPNRGLHTIIAALGLLPQT
                     LRDQVQLTVAHTERPKEEWYLSDIKTSIERLGLGNTVRFIGRIPHEAMPGVYGTQHVL
                     VSATTRAEGLPMTMMEAMCAGCAVITTGSGGAQEIADLAGLPLFPGDHPAALSGLIAR
                     LATDRRWAFEVAVRGQEAVLKHFSWARMAEALGRTLHGLAEESAARRGVRGEGVTHEG
                     APHPAVR"
     gene            29687..>30791
                     /locus_tag="VGQ24_05285"
     CDS             29687..>30791
                     /locus_tag="VGQ24_05285"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEV8454279.1"
                     /translation="MRILHVTPTYAPALGGAEHHLKAVSERLVARGHTVTVFTANVTE
                     GQSAWMSRYSGLPQEEIINGVRVVRFDPRHGLLAKAFDRLLEVRGGWRTVSTLLSPAG
                     RELLIQGPRTLNMIGAILRAKADVVVSVNWFWPQAYHAHLARSFRRFRLVGMPLFHTT
                     QAWCSRPVYDRMLARCDAVIAMTGHEKDYAEGRGATTVDVAGAGVTPRDLEPRDGAQV
                     RARYGLRDLPVVGYVGQQLAAKGVAKLIEAMPWVWQWNPEVRLVLAGKSVGDPEVEAA
                     LRSLSAAHRARVVEIGRFEDGEKASIFDAFDVFAMPSKEDSFGIVYLEAWLCRKPVIG
                     ARTGSTQCVIDEGQDGLLVDPENAEDIARAIVSL"
BASE COUNT         5024 a        10373 c        10388 g         5006 t
ORIGIN      
        1 gaccgcatcc acgatcgtcg acatcgcgaa ccggatactg gaggccgcgg gacgatccct
       61 cggacggaaa tggaaggact cgatcagcga cttcgtggaa cgcctcgggt tgacgcttac
      121 actgaccgct gacccgacca cggggctgat ccggcccagc ctggatatca gacttcgctc
      181 ggcgcctctc gaggaacagc gagcctcgct ctcgaaaacc ctggactcga ttgatggatt
      241 ggcgggggcc aggcagatgc cggttggaat cgtgctggat gagttccagg agattcaaag
      301 attcggtggt gacacggccg agtggcacct gagggggatc attcagcatc atcagaacgt
      361 cagctacata ctcgcgggtt cacaggctca catcatcgag cgcatgctcg ataagggacg
      421 ggcattctac gggcttgcgg atcaattaca gctcggcgcc attgacccgg ctcacctgtc
      481 ggcatggatc gacgacagaa tgactcaggg aggcgtaaag gcggtcgggg tcggcgcggc
      541 gatcatcgcc cgggccggac cgaggacccg agacatagtc caggtcgcac gccagtgctt
      601 cgacaattgc cggacaaccg gccgtgccga tgaagctgcc gtcgtgcagg cctacgatga
      661 cgtggtggcc gaacaagagg ccctgttcca atccatgtgg aacggtctca ccggtcagca
      721 gcagaatgta ctgcgcgcgg tagccgcgga cctggatgga ctgacgacga aggcatccat
      781 caagcagttc gcgcttacga gcagcggggc tgcgagcaat tcgggtcgtg cgatgatcga
      841 ggcgggttac ctggtcaagt catcgagtaa gaccggatac tcgtttgaaa cgccgttctt
      901 cgggtattgg gtcaagaaag aaaccatggc cgatttgggc gcgtcgatcc ccatccgccc
      961 ggaagatcag gcagctcggt gatgaccgcc cagggatagc cggcgacgaa gggcgtgcgc
     1021 catcgaacga tgcttggcac gccctccccg ggatgctccc ctggtgccta gcccgccggc
     1081 ggctcgcccc cacccagtgc ccggtacacc gccaccaggg cggtgaccgc gtcggtccgc
     1141 ccctgcgcca gctggtcctg ggtcgccagg agcgagcgct cggcgtccag cacctggaga
     1201 aagtcggcca ctccaccctc gaaccggatc cgggccagct cggccgcgcg gccgctcgca
     1261 tccgccgcct cggtgagctg ggtcagccgc tcccgtgcct tggcgtacgc caccagcgcg
     1321 gtttcgacct cttcccgcgc gaggagcacg gtctgctcct gccgcgcccg cgcctcggct
     1381 tcgagggcac gcgccgcgtc cacccccgcc ttcacccggc ccagattgaa ggccggccac
     1441 gagatcaccg gccccacggc aaacctgccg ctaccagtcc ggccgaggga gtcgaacccg
     1501 gtcgaagtga accccgccgt tccgcccacg ctgaatcggg ggaggtaatc ggccttcgcc
     1561 gccccgacga acgcggtttc cgccgcgagc cgccgctccg ccgcgcggac atccggccgc
     1621 gagcggatca gcgagtccac ctggcccgga gccacgtcgg gcagcgcggg cagcgcgcac
     1681 gggccggcca gctccgcccc aaccgcggtg ggatcgcgcc cgatcaacac cccgatccgg
     1741 tgccccgcgg ccgcggtcct gctctccagc gtgggtaccg acgccagggt ggtgctgagc
     1801 tgggcctggg cccgctcggt gtcgaaggcg ttcccccggc cggcgtcgag ccggtcccgg
     1861 gtgagttgaa gcgtgcggcg ctggttctcc gcgttccggc gcgccacgtc gagctggtcc
     1921 tgtgctccac gcaggtcgaa atacgccgac gccagctcgg cggcaataac ccgctgcacg
     1981 tcccgcacgt cctcgcccgc cgcctgggcg agggcggtgt gaccccggag cgtccggcgg
     2041 accctgccga agacgtcgag ctcccaatcc gccctgagcc cggcgtccca gaggtcccgc
     2101 tccggtatgg cgaggccgaa cgccgcactg gagctgcgct gccgggtgta gccgcccgcc
     2161 acggtgatgg tgggagccag gtcgagcttc gcgttggccc gcgccgcgcg ggcctggcgc
     2221 acccgcgcct cggccaccac tacgtcccga ttcgcccgaa gcgcctcggc ggtgagccgg
     2281 gccagcgtgg tgtctcccag ccgctgccag aataccagct ggccgctgcc gtcggcgctc
     2341 ggggctcggg aagcctctac tccgctcgcc ggtggtgcgg ccggcgattg cagtgcagcc
     2401 ggcgattgcc gtgcggccgg tgattgcggt gcggccggcg attgtgccgt tgcggtgccc
     2461 gccgccagga gctgcacgcc cgccatcagt ccaacgaatg ccttacgcat gcgccacctc
     2521 cccgaggacc gggaacgcgc ccgacggttc cggctccgtc tcgaccgcca ccgcgcgatg
     2581 gtcggccgcg atgagcgagt agaagaccgg caccacgaac agcgtgaaca ccgtgccgac
     2641 cgccatgccc gcgacgagaa tggtcccgat gctgttccgg gccgcggatc cggggccgtt
     2701 cgccaggacc agcgggaagt ggccgaagat ggtggccgcc gtggtcatga gcaccgggcg
     2761 gagccgcgtg agcgacgcct cccggatcgc cgcgagcctg gcgtgccccc gctcctggag
     2821 ccggttcgcg aactccacga tcaggatccc gtttttcgcg atcagcccca ccagggtgat
     2881 caggcccacc tgggagtaga tgttgatggt ggtgagatcg aggaagctga agaccagcgc
     2941 gcccgcgatg gcgagcggca ccgagcccag cagcacgatc aggggatcgc ggaagctctg
     3001 gaactgcgcc gcgagcacca ggtagatgag gatcacggcg aagccgagcg tcacgaccag
     3061 cgccccgccc tcgcggcgga tctgccgcga ctcgccggcg tagtccaccg tcatgccggg
     3121 gggcgccgac gcggcggccg cctgctccag gaccttcagc ccctcgtcct tggtgattcc
     3181 cggcttgacg ccgccgaaga cccgcaccgc gttccgctgc ccgaaccggt tgagcgtgcg
     3241 gggcgccgga tgggtctcga tccgggtgaa cgtggacacc ggcaccagct cgccgctcgg
     3301 cgtcttgatc ttgaggtcga gcagcggccc caccgtcgcc cggtccttct cgccgatctg
     3361 cggaatgacc ttgtagctcc gatcgaagta gttgaaccgg ttgacgtagc cgccgccgag
     3421 cagggtgccc agctcgcgcc cgaccgtggc gaggtcgagc ccgaggtcgg ccacctggtc
     3481 ccggtcgatc accacccgcg cctcggggag atcgatcttg aggtcggtgt ccacgtagag
     3541 gaacttgccg ctctgccagc cggcaccgac cacggcgccg accgactcga gcaactgctc
     3601 gggcggcaga tcgctctcga gcaggagctc cacgtcgtac tgccccggcg tcggaagcgg
     3661 cgggtcgagc cgcgggaaaa cccggaggcc cgggacctgc gagaccgccc cgtacacctg
     3721 cccgtacatc tgctcggtgg agcgcttgcg ctggtgccag tccttcgcca cgaacccgcc
     3781 gaacccgccc cagttggcgg tgagcgacca catgaaccgg ttctccggga aggcgttgac
     3841 ggccttcacg acgtcgagcg aggcgcggtt ggtggccgcg agcgtcgcgt cgggggccga
     3901 ctcgaagaac aggctgatgt ggctctggtc ctcgaccggg gccagctccc ggcgggagaa
     3961 ggtgtagagc ggccaggccg ccaccgtcac gaagagcgcg gcggcgacga tcgcccagcg
     4021 catgccgagc gcgccgtcca ggattcggcc gtacagctgc cggacccggt cgaagccgcg
     4081 attcaccagc gtggtcagcc ggccttcctt cccttccgcg tgcaccaggc gagagctcat
     4141 catcggcgaa agcgtcaccg ccacgatccc cgacaccacc accgcggccg ccagggtgat
     4201 ggcgaactcg aggaacagcg agccggtgag cccgccctgg aatgcgatcg gcgtatagac
     4261 cgcggccagc gtaatggtca tggcgatgat cgggccgatc agctcgcgcg cgccgagcag
     4321 cgcggcgtcg agccgcgacc ggccctggcg gacgtgccgc tcgatgttct ccaccaccac
     4381 gatggcgtcg tccaccacca gaccgaccga caacacgatc gccaggatgg tcagcaggtt
     4441 gaggctgaat ccgaaggcag ccatgaagat gcccgcgccc accagcgaaa tcggcatggc
     4501 gacgagcggc accagcatcg tgcggagtga ccccaggaac aggaacacca ccagggccac
     4561 gatcagcatc gtttcgagca gggtcttgct gatctcgtgg agcgcatcgc gcatgaagac
     4621 ggtgccgtcc cacaccagcc gcatctcgac gtccttgggg agcgtggggc ggatccggtt
     4681 catctccgcc accagccggt cgcccacgct gatctcgttg gcgccgggca gcggccagac
     4741 gcccaggtac accgccgcct gggtgttgta cttggccagg agctgcgcct cctccgcccc
     4801 cagctccacc ttggccacgt cccgcaggcg cacgacggcc ccggcgcgct cggtcacgac
     4861 caggttttcg aactcttcag gcgtccggag atcggtgttc gcgagcaagt tgacctgaac
     4921 gagattgccc ttggtctgtc ccaccgccgc caggtagttg ttgcgctgga gcgcggcgta
     4981 cacatcgccg ggcgccaggt tcaccgccgc gagccgttcc ggatcgatcc acacccgcat
     5041 ggcgatgggc tcgccgatga tctcgacccg ctgcacgccc tcgatggtgg cgagctgcgg
     5101 ctggagggtc cgggtgagcc agtccgtcac ctcgggcaca gtgcggtcgg tcgacgtgaa
     5161 cccgagatag aacgacgcgt agggccggtc ggtccgctgg atgttcacca ccggcggctc
     5221 ggcgtcgggc gggagctccg accgcacctg ctggagccgc gcggtgacct cggcgagcgc
     5281 cgcggtgctg ctgtagttga gcttgagccg caccgtcacg gtgctcacgc cggcccggct
     5341 ggtggattcg atgtagtcca ccccgccgat ggccgagacc gtgcgttcga tgggcgtggt
     5401 gaggaagccc cggacggttt cggcgctcgc cccgtaatac accgtggtga tgatcacgga
     5461 ggagctctcg atcttggggt actgctggat ggggagcgac gaaagcgccc gccagcccat
     5521 gagcacgatc accaagttca ccaccagcgc gatcaccgga tgccggatga acaggtcggt
     5581 gatgccgcgg cgctgtgtgt ccgacatcag cggcctcctt tccccgccgc cgccggcggg
     5641 ccggcgggcg acaccagcac gccctcacgc agcttgaacg agcccgacgc ggccacctgc
     5701 tcaccaggcc tgagcccccc aacgaccagg acctcgtccc ccagcacctc gccggcctgc
     5761 accagccgga ggtgggcgcg ggccttaccg tgctcatccg gggaaacgac gaagacgtgg
     5821 tcgccgtccg gtcccttgcg caacgcgctc accggaatcg ccaccgcctc ggtgaaccca
     5881 ccggtcggca cccgcacccg caccgacgcg cccggcccgg cgatgaggac atcgcccttc
     5941 atgcgcgcgc ggaccatcgc gttccgggtg gtgggatcca ctttcgcgtc gatcgcgacg
     6001 atcctggcgg tcgtgagcgt cgaggcgctc ccggcggtga cgatgacgct gtccccgacg
     6061 tggaggcctt gggccacgtc ctgggcgacg gtgaagtcca cgttcgcggc ggcatccacg
     6121 ccctgcagcg tggtgagcag cgtcccctcc ggcaggtact ggccgggatg cacgtccgac
     6181 aggccgacac gagcccggaa cggagcccgg atcgtcttcc gctcgatgac cgccttgttg
     6241 cgggcgattt cggcgagcgc cacgtcgcgc tcggcccggg cgcgatccac ttcctccacc
     6301 gacaccgcgt tgtgctcgag gaggcgctgg aggcggagca gcgtcgtctc cgccagcgtg
     6361 gcccgggcct cctccgcctt gagagaggcg gcttcaaccg agacgtcgag cccgacgagg
     6421 accacccctg gctcgacgac ctgccccggc gtgagcatga cgtgacggac ggtgccggcc
     6481 agctcgttgc gcaaggtgac ggagcgcagc gccagcacgg tgcctaccgc gctggtgctc
     6541 ggttgatgct cccggggctc ggcggccgcc acggtgacgg cctcgctcgg ctcgggcatg
     6601 ccgtcggagg catgcgcgga gcgctcgagc gaggagctct tccaggcggc gaggattccc
     6661 ccgctgccgg cgacggtgac gagaagggcc gtggccccta tccaaccagg tagacggatg
     6721 atcttgctgc gctgcatggc gggttcgctc tcctgacgct ttgccggtcc tgcgtcctcg
     6781 ggtttgactg ctgctgacat tgagtcgtcg ttcggcgaag gtccgaatcg acacccgccc
     6841 tggctccggt cttcctgggc tgtttttgag tcagatggtt tgactaccat ctaacaatta
     6901 ggtgtaagac gtcgtcgaag gtcatcgggt ttcactactc catggagtgg ctgaggaact
     6961 gtcggtgccg gcccggggcg gtccgggcca gcagctcggc gctatacgcg gccagcacct
     7021 cgcggcggac tcggtagtcc atgtactgcc cgtgccggtc cgtctccacc aggccagccc
     7081 gcaccaactc cttgatgtga tgggagatag tggccttggt gacggggaag tcccggcaga
     7141 gctgctggca ggagtactcc tcggtgctcg cgatcgcctc cagcagggcg aaccggcgtg
     7201 ggtccgccag cgccttggcg atgcggtcga attgacccgc ggtgaggagg ctcttgggct
     7261 caggcatagt tcgatatata tcgaactctg tccagatggt caagggggcc ggtcccggtc
     7321 cccgccaagg ccgggtgccc ggatttcaaa cctcggcccg cggagcgtcg tcctattggc
     7381 ccaggcagcc gaggggtatc ctcctggtca tgcgcctgct gctccgctcc ctgctccgct
     7441 cccccgcgct ctcgatcggt gtcaccgcga cgctcgccct cggcgtcggc gccctgacgg
     7501 tgacgttcgc cgtcgtcgat gccgcgctca ttcgccagcc gccgtttcag gacgccggac
     7561 gcatcacgat gctgtatctc gtccggaacc cgatcggcga gccggcccgg aaggaacgct
     7621 ggtccttccc ccgcttccaa ctgctccagg catcccagcg cagcttcgag cgggttgcga
     7681 gctactccaa ccccacgctc acgctgtccg gggaggatga cgcggagctg gttcacggcg
     7741 agatggtgtc gccgggctat ttccccctgc tccgcgcgcg cgcggttcgc ggccgggtgc
     7801 tggcctttgc cgacgacgat gtcgccaacc cgtcgccggt ggtggtgctc tcgcatgcgc
     7861 tctggagccg tcgcttcgca tcggatcccg ggatggtcgg acgcgccgtc cgcatcaacg
     7921 ggctgatgct caccgtcgtc ggcgtgctcc ccgagggctt tcacggcctc tccggaagcg
     7981 cggacatctg gaccccgacg accatggcgc cgcgcctcac ctacgccgac tacgtgcgaa
     8041 ccaaccagaa cttcatcagc gtggtcggac ggctgcggcg gggcgtttcg ctcgaggggg
     8101 cccgcgccga gctggccgtg ctgggcgcca cgatcaatcg cgccttgccg agcgatccgg
     8161 acaatcccgc ggagcgggtg ggcgccaccg cggtgaccat caacgaagcc cgcgtggacc
     8221 ggaccgtgcg gcgctcgctg gcggtgctct tcaccgccgt cctgctgctg ctcctgctcg
     8281 ggtgcgccaa cgtgacgaac ctcctgctgg gtcgcgcggc caccagacgg cgtgaggcgg
     8341 cggtgcgcct ggcgctcggc agcggcgcgg gccggctgtt ccggcacctc ctcgccgagc
     8401 acctcgtgct ggcgctgccc ggcgcattga tcggcgtgct ggcggcctgg cggctgaccc
     8461 tgctggtgac gcctccgacc aacgcgtggg cggcgcggaa cttctacggc agcctcgccg
     8521 cgttcgacac gccgggcttc gggccgagcg aggccgcgtt cggggtggca ctcgcgctgc
     8581 tcgcggcgct gctggtggcc atcccgccgg cgctgagcgc gttccggctc gacctgcagt
     8641 cggagatcaa atcggggtcg cgcggcatcg ccggaggcgc gatcacgcta cgccggccga
     8701 cggtgcgcgg ggtgctcgtc gcggtcgagg cgtcgctcgc ggttctcctc gtcgtggctg
     8761 cgggactcct gatcgacagc tttcagcgga tgcggaggac ggagctcggc gtcgacacct
     8821 cgggcatcct gacgttctgg gtcattccgt ccgaagcccg ggttcctccc ggcggggcgg
     8881 ccgcctgggt gagccggctg ctcgaggctc tggcgcgggt tcccggcgtg gtgtccgcga
     8941 ccgtcgacgg tggcgccccg ctcgccggca ccgcgaggag cacgttgtac atcgcgggcc
     9001 ggccggcgcc gcctcctcat caggcgccgc cggtgctgcg ccactacgtg gctcccgatc
     9061 acttcaggac gctcggcatc ccggttcgcc gcggccgggt attcggaccg ggcgacgtcg
     9121 cgggcgcgcc ccgcgtcacg gtgatcagcg aaaccgcggc ccgccgcttc tggcccgacg
     9181 aggagccgat cggcaagcgg gtctggttcg gcggcggcag cagcttcagc agtcccgatt
     9241 ccagcgcgga gatcgtgggc atcgtcgggg acgtgatgta cgagccgctc gaccggcagc
     9301 ccaacaaggc gagcttctac accccgtacg cgcagttcac ctacgcgtcg cgcatggtgt
     9361 tcctgcggac ggcaggagat ccgctgtccc tggtgcccgg ggtcaggaag gcgctccgcg
     9421 gcgtcgatcc ggacgtcgcc atgcgcgacg tgcagaccct ggaccaggtt gtgagcggct
     9481 cctgggcccg ccaccgattc gaggcgatcg tgttcggcgg tttcggcgcc gccgccctcc
     9541 tgctcgcggc gagcggcatc ttcgcggtgc tcgcctatgc ggtggccgac cgtacccgag
     9601 aattcggcgt gcgcatcgcc ctcggcgccg gcgcggcgga cgtcatgcgg ctggttctgc
     9661 gcgaagggct cgcgttcccc acggtgggca tgctcctcgg cgtgatggca tcgttcgcgg
     9721 cgaccggcgc gatgcgctcg tcgctctatg agatctcgcc cctcgagccc gtggtgtacg
     9781 cggaaaccat cggactgctg ttgatcgccg cggcggcggc atgcctcatt cccgcctgga
     9841 gagccgcacg cgccgatccg atggaagcca tgcgcgcgga gtgacgcgca gaggttgccc
     9901 gagcgttctg atcggccatc gtgcccgcac caggatcatg gaatccgcca gcatccccgg
     9961 cgcgccggcg cgggagtagc tcggcgaccg gccgtggaag gccagggagt tggacgagcg
    10021 ggtgcaattg aaccaggcgt gggaggtgtc gcgggccctc gaggccaacc ccagcctaca
    10081 ccaggccctt ggactgcgcc aggaggacca gctccaggcg gctgtagatc ttcagcttat
    10141 ggtagatgtt gtggaggtgg atcttgatcg tcccctcggt gatcccgagt tgggcggcca
    10201 tctggcggtt ggacaggccc gtggtggaca ttcgcatgag ctcgagctcg cgcggcgtga
    10261 gcacttcggc cagctcctgc tgcgcggctt cccgccggag caagagctcc agcgcgccac
    10321 agtgagtctc tcgctcgatc cactgcttgc cggcgtggac ctggcgcacg cattggatca
    10381 gcatcttcgg ggcgaactcc ttcagaacca caccccggac gccgaggcgg agcgcttcga
    10441 gagcttcgcc cttctgcatc gcggccgcga gaatgaccac cttggtcgga agcttctcct
    10501 cccgaatctc ccgcaggacc tcgaggccgc ccttcctcgg catccggata tccaacacca
    10561 gaatgtcggg gcgatgtcgt ctcaccgctt ccagcgcctc cacgccatcg gtgcagcgcg
    10621 ctacgatctc gaaccccggc tccaggcgaa gcaggtgttc cagtccatgc aggacgaccg
    10681 ggtgatcgtc ggccaggacc agccggatag acatatcacg ccacggcccg cgccagcggc
    10741 aggcggatct ccagtcgggc gcccgaggtg gtggagtcaa tgtccagggt cccgccgagg
    10801 gcggacagcc gctctcgcaa cgatgccggg ccgaggtgga gcgccttcag cgcgctgtgg
    10861 tcgtagcagc cgcggaaggg gaagccgtgt ccattatcgg caaccacgag ccggacctcg
    10921 cggtaacccc cgccgagcac agtccgggct ttggtggcct gcgcgtgtcg ggccacgttc
    10981 accaggggtt cctggaccag ccgaaagatc ccgtatcgca tggatcctgg catatccggc
    11041 gcatagccgg caagcggtcc gcgatctcga gggtgacggg caggtgccag acgtctttca
    11101 agcccttcac caactctccc agacgtacct ccagctcccc gcagctggac cgggcacccg
    11161 gcgaacctgg acggagcttt cgaaagcaga acctgagatc gcgatgctgc tcggagtggc
    11221 atcaggggtg ccagggtagg cattcgtcag gtcacgatgt caaagtggtt atagccctat
    11281 tagttgcagt ggcgacacct ggcctcgcta cgcatgggac cctgtcacac ggcgcaccag
    11341 tcttgtgcag gagcgtccac gcctgcaccg ctttggggcg acaccgcctc gccctgcgtg
    11401 ttttctcggg gccccgcctt ccgccggccc tgtgagccgg cgactcagga cctggtggca
    11461 ggacggctcc cccgagaccg tcacctctta cctctcccgc gtgacgccag agcgagccgc
    11521 ggacccggag gacgtcatcc gtccagtgtt ggaggtctcg ttcagccggg cacgtcaact
    11581 cacggcgtgc gccagcggca agcggatctc cagtcgggcg cccgaggtgg tggagtcaat
    11641 gtccagggtc ccgccgaggg cggacacccg ctctcgcaac gatgccgggc cgaggtggag
    11701 cgccttcagc gcgctgtggt cgtagcagcc gcggaagcgg aagccgtgcc cattgtcggc
    11761 aaccacgagg cggacctcgc ggtatccccc gccgagcacc acgcgggctt cggtggcctc
    11821 cgcgtgtcgg gccacgttga ccagggcttc ctggaccagc cgatagatct cgtatcgcat
    11881 ggatgcctgc atatccggca actgctctgc aatctccagg gtgatgggca ggttccagac
    11941 gtctatcaag cccttcacca gctctcccag acgtaactcc agctccccgc cgctcgaaag
    12001 gacacccagc aatgcgggac ggagctttcg aatgaagaac ctcaggtcgc gatgctcctc
    12061 ggcgaggaga tgcccaagct cgtcgagttc tttccgcgca cctggcgggt cggtctccag
    12121 tcgccgcgat acgctctcca gctggaaacc cacggcggtc agcgactgaa ggacgccgtc
    12181 gtgcaggtcc ccggcgaggt ggacacgctc tgttatcgcg gctgcgtcgt cgcgctgccg
    12241 catgaggagc agctgatcca tcgaatcggc gatcaggcgg cccacgacgc gggcgacttc
    12301 gagatcgtcc tcggtcagct tcactctatc gagggcgagc agatgccctt cgaattgccg
    12361 gccccgcacc ggcacataca ggaccgctcg aacctcgaag cgggagcgga atccgccgtg
    12421 gagcgggacg ccgcgccagt ggtgcgcgcc ctgccccgag gcctggagca cgaccgggtc
    12481 ggcggcgctg gcatcggtgc agatgaacgg gcgccccgcc agggcctcgg ccaccagcgg
    12541 ctggtaggtc gtcggcgcct cctgccggct ttgcagcccc ttggcggacc acaagaccac
    12601 ccgacaccac ggctcgtccg ggtcgtccca caccagcaag acccttggca ttcggagaat
    12661 cccggcggtg tgtcgcagca gggcaccgat gaagtcctgg ggatccatcg agctgacgct
    12721 gggccaggcc gacaggcggg agaggtcgtc gcgcagccgg tcgtggtagg caccgaaata
    12781 ggccagcagg ccgcccacga ccgccaggta cgcgtcgcga ataaccagcc ggtggatctc
    12841 gaagtccgca gacgagccag cctccgctga atagagcgcc tgcaagttga gcaccgcgag
    12901 caccacgacc gtggtccaca cggcgccgcg ccaccgccag cggagtgtgg cgctcaccag
    12961 cgcgaacgtg aaataggcga agaaggggct gacggatccc tcggtcagga actggaggac
    13021 gctgaaaagc gtcaggtcca ccccgtgggt gatgagcccc cgtcgggtcg aggtcggggt
    13081 ccgcgagacg atgaacgcca ggagcacggc atacagcaca tacagcgaga ggagcaggta
    13141 ggtcgcgtca gcgtaccggg ccggcgtgta ggggtcgatc aggatggcga acagaccgaa
    13201 ggccgcgagg accacgcggc cagcggcaat cagccgcgcg ccgcgaagcc gggggatgta
    13261 gcccggcggg gtcagaaccc ggtgaatgtt gtcggacctg gcggagcccg gggcccgccc
    13321 gcgagcatgg cgcgcgggcg cgccagcctc atcgatcgag ccggggggtt cgaccgggat
    13381 gcggtcggcc gcggcttcag ccgcgaacgg ccggtcgcga tcgggtctga tggaggggcg
    13441 cggagcttcc acgccgcaag aagctacacc cggtggaggg cttgtccaga ttccggccac
    13501 ataaagcggc cgtccatcaa accggggtta tagaaaggta tatcgccggc ccgggatgag
    13561 gacgtcgcac cccgcaggga tgcccggtcg tagcccgaac gatatagagc ttcctatccg
    13621 ccgggcaata gcgactcgcc cactaacacg ccatcattgt gccacggctc tgcagtaaag
    13681 ccagcgccta acccgccagc gcgatgcgtc gcgctcaacg aaaagatatc gagcatggcg
    13741 gcgccaagcc cacgcgcgca cccgcccggc gggtttcgcg ggggttccgg ttcggaaggc
    13801 gagatcaccg gttggcgaag aggtggtcgg cagccccgcg cgggcgaccc tcatcatagg
    13861 aggagacgat ccatgcgagg agcgggtcca gcagaggcca cggcttcagg tcagtttggc
    13921 tgtttccggt accaggcccg gtttcacctt ttgcaagatg gaggagtgtg taccatgact
    13981 agacgatggt tgacagctgg cgcgctctca ctgttcgcga tcgcctgtac ggcgggtccc
    14041 gaggcgaccg aatcgccgac ggggccggac ctcgcgaagg catcgcagag cgggaccacg
    14101 ttgggggcct acaagaccct cgaggcgtgc tacgaaggca ccaatccctt cgaggtgaag
    14161 ttcttcggct cgatcgtgat caataggctc tccgcgaccg gcacgaagga tctcacggtt
    14221 ctcgacttca tccagaacat gagcgccggg caagccaagg tcgccgatgg cgcggcattc
    14281 gggggtctgg tcaactcggc tatatccgca ttagccacat tcaacaacat ccagatcacc
    14341 aaggcgaatg gcaacccgct cactgagatc gcggggtgcg gtggaccgga ctgcgacccg
    14401 aacgaggcat tggcctacga ggcaaccggc cccttcaccg tgacggccgg ccagatttac
    14461 cgcaacactg cgaacatcac catcaccaat cactccggct ggctggcggg ctcgaacaac
    14521 tgtcccaccg gcgacccgcg gatcttcgac ggcggatgcc cgtttggtcc gtcaaccaag
    14581 ttctcgctga ccgttccaca ggacgggttc ccggcgtgcg gcggcctggg ttgcaccctg
    14641 acccagggct attggaagac ccactccagt tacgggccgg ccagcgcgga tccgggctgg
    14701 ttcaacatcg gcgacgtcga tggtgatgcc accagcgagg gacctgacga gttgttcttc
    14761 gggaccgggt tgacctggta ccagatgttc aacaccacac cgcaattcgg caacgcgtac
    14821 gtcatcctcg cgcaccagta cgaggccgcg gtgcttaacg tcgcgaacgg cgccagcagc
    14881 actgccattg caccagacct tgccttggcc gcctgctacc ttgcggctca cacaaccacc
    14941 gacgctggcc ctgctaactc caggcaaggc ctcacggatg ttgattccgc atgcgatgtg
    15001 gacttgaccg gcgattccaa tgccatgatt gccctcgcga cgaccttgga tacctacaac
    15061 aatggcgacc ttggcccgcc gcactgctcc aacccggacg agccggatcc cacaccatag
    15121 agctatctcg ggtagctgac gaacacggtg agggtgacat agtaccaggc cgactgggcg
    15181 tacttgtggg tcaccttcgg cgacgtggtc acggccgcag cgccgtcacc gaaggtccag
    15241 gtgtagctga cgatctgctg gtcgtcggtc gagccggttc cgtcgaagct gcacccattc
    15301 ctaccgctgc acctgacggt gaagctcgcg gtcgggggca ggtccgtcgg cggcggcggt
    15361 gggggcgggt tcgtcacgac cgagccggca tagagaagca ggttcggcgt ttcgctgccc
    15421 aatcctgaaa gcacgccgta cgtcgcggtc gtggtgatca cccacgcgac cgccgcgggg
    15481 agcgcggtgg gattggcctg caggtagagc gctgcggtcc ctgcaacgtg cggcgttgcc
    15541 atagacgtgc cgctgatcgt cttcgtggcc ccatcgtcgg tgttccatgc cgaggtgatg
    15601 gacgagccgg gggcgaacag gtcgacgcag atcccggtgt tcgagtagct ggctctggcg
    15661 tcgctggccg tgcttgcgcc caccgtcaat gcatcgggtg tgcttgcggg agagtaactg
    15721 caagcgtcgg cggaactgtt tcccgcagcc accgcgtagg tgacgccggc tttgatcgag
    15781 ttctgaactg ccgcgttgaa cgtcgacgac agcgagccgc ccagactcat gttcgccacc
    15841 gcaggcagga cccgattctg ggcgacccag tcgatcccgg ctatcacccc gctgtagctg
    15901 ccactcccgc tgcagtcgag cacccgcacg gcatagagcc tcacaccctt cgctacaccg
    15961 taggtcgttc cgccgacggt ccccgcgacg tgggttccgt gcccgttgca gtcgttggtc
    16021 ccgttcccgt cgggcaccga ggagaagacc ccgaacgcgc ggccgccgaa ctcggtgtgc
    16081 gtagttcgga ttccggtatc gatgatgtag acgttcactc cggcgccggt cgcggcataa
    16141 gaatacgtgc catcgagggg cagcaggttc tgatcgatcc gatccagccc ccacgtcgcg
    16201 ttggtctcga tctcactcac ccgggcgatc tgatcctgtt cgatggacgc cacgttggta
    16261 ttgtgctgaa gcgcggaggc cgcttccagc gagagctggg ctgaaaagcc cttgatcgcc
    16321 gcggtgtagg tgaagcccag cgtcccgccg ctgtgcgcca ccagctggcg cgccagaccc
    16381 ggcacgtcgc gcacctcgtc cttgaactgc acgatgtact ggccggggat gacaacgctc
    16441 cccaggccct gggccaggga catcgcggcc aggggcgctt gacccgaagg gcccgccgtg
    16501 accggtccat cggcgcatcc caccagcccc aaagccaccg cggcaaggcc taaccgtacc
    16561 cccaggctgc cctgaaccgt gccattcaac ttgagcaccg caggttttcc tgtgagagtc
    16621 agaactgtca aaaagcatga agcataccag tgcacccaca gcggatcatg actgataagc
    16681 acttgttatt acgaatgtta gatattctgt gaaggatccc gcagcaccgg attatatggc
    16741 gaaatacgcg acatgatgca tggcaagtcc agtgccagcg accgggatcg actgagttct
    16801 ctgggggcaa ttacctgcgc ttgccacaag cttgtcgtgc acgggcggct gaaaccaggc
    16861 cgacgcaact tttgactcct acctagatac ggccccccca aactcgatcg ccgggcccgg
    16921 cgccgcctgg agcgctacct gctccacgcg gcgcgaccgg cgggatttcc gacccctcca
    16981 gccgcggtaa gccctgctgc gcgcgttcct caggggcacg cgcctctttc tctttttttc
    17041 agaacaggac attgattgtg caggagtcaa taatcctcca gtccgtcgcc caaaggtcga
    17101 aaaccgggcg agcttctcga ctcggcccgg accgagacct ctcgaaccct tccctcggcg
    17161 gacatccgca gaggggcggc ttcgaaaggc caggactcat gaagctctcg aagttcaccg
    17221 acgagcaggt cgcctgcgtg ctgcgccagg ccgaggccgt caaccgggtg tattcccgcc
    17281 cgccctcacg cgtggtgggt cgtccttccc ccgagcacgg ttcgaagcac cggaatgtcc
    17341 ttgatgcgcg ccggttcctc ggtgtgcggg tcccgcgcca gcatggcaaa gtcggccagc
    17401 atccccggca cgatggcgcc cttggtccgc tcctccttcg aagcgtacgc cccgttcacc
    17461 gtgcagatcc ggagcgcctc cggcaccgta atcttctggt tgcctcccca gacccggccc
    17521 ttgtagtcgg tccgggtcac catgctctgg atcgccatga gcggctcgta ggggcccggc
    17581 atgtagtccg acgcgggcgc gacgggaatg ccggagtcga ggaacgagcg gtgcgcgaac
    17641 atccagcgca ccttctcctc gccgtactcg gcccacttct cgccatggta gtagacgtag
    17701 gtgtagaacg gcgccggaat caccccggcc gccttgatac gccggagcag gtcggggttc
    17761 accagggtgc aatgctcgat ccggtgccgc acgtcgggct tcggccacag cttctgcacc
    17821 cgctcgtagg cgttgagcac catgtcgatg gtcacgtcgc cgttggcgtg gatcgccacc
    17881 cgccacccgc cgcggtgggc ctcctcgacc gcgtcgtgga tctcctgctg cgacatggtg
    17941 aggatgccga aatcgctggg gcggccgacg tacggcgtgc tcatccgcat ggtccgctcc
    18001 gaagcggagc cgtcggccac gaacttgacc ggcccgatcc gcagcacctc gtcgccgaag
    18061 ccggtgcgga tgcccgaggc gcggaacccc gggtagagct ggcgcgaggg gaagaagtac
    18121 atccggaacc ggagctcgcc ggcggcgatc gcgtcctcca gcgcggtcag gtccgcgcgg
    18181 ctgccgccgg cgctgtgcac cgaggtgatt cccgccttcg ccatcgccgc cgagagcgcc
    18241 gccaccgcgc ggcggcggag ctcgggggtg atctccggcc gctttccgac cccgtagaac
    18301 aggtcctgcg cactttcggc gaccttgccg gtcagctccc cgttctcgcg gtagatcttg
    18361 ccgttggcgg gatcgggcgc ggcggcggtg atccccgcca gcgcgaaggc cttgctgttg
    18421 gcaaccagcg tgtggccgcc ccggtgctgc accatggccg ggtggtcggg caccgcctgg
    18481 tccaggtcgc ggcgggtgat cggacgcccg tcgctcagct tcgtgtcgtc gtacatcacg
    18541 ccggtcaccc agagctccgc gggcgtcgcg gccgcccgtt ttttcatcgc cgcctgaatg
    18601 tcggcgatcg agggcaggtt gacgttgacg ccggtgagct cgtccacccc gtcggggtgg
    18661 caatgcgcgt caatgaaccc gggaaacacc gtcgtgccgc gcgcgtcgat cacctcggtg
    18721 gtgggcgtcg ccagccggcg gatctcttcg gtggtcccga ccgcgacgaa tcgcccgccc
    18781 gtcaccgcga acgcctccgc cttcggcacc gcgacatcca tcgtgtgcac ggcgccgccg
    18841 agcagtacga gatcggggcc ggcgcggctc tgcccgccgg tggctccgga tcggaaggcg
    18901 tcgggaagtc cgcgccccgc gcttcccgac ccagtgccac tcgccagccc cgtcccggcc
    18961 accacggccg cgccggtggc ggcgaggaaa tcccgccggg tgctcacggc cgccaggtcc
    19021 ccttcgccac cttgggcacg aaccgatcga gccccggcgg cgggaagcgg agcgtcttcc
    19081 ccttttcggc gctctggtag gcggtcatca ggagcttcac cacctcgagc ccgtcgtcga
    19141 aggtgagcct cggcttctcc ttgccgagaa atacgcgggt gaagtggcgg tcctccgcct
    19201 cgtagccgta ggctaccgct tcctgggcca ctaccggcat ctggcccacc tcggcgttct
    19261 gcttctcgac caggtcttcg ccggcctttc ccttgacttc gcggctgaag aaaagcttga
    19321 ggccggtatc gagggtgttc cacgccatcg agtactcggg gccgagcagc tcggcggaga
    19381 gccggagccc ggcgccgacg aagctccagg aggtggtcgc ctcgccgaag gcggtccggc
    19441 catcctcggt gcggaactcg atggtgacgc tggcgaagtc ctccgacggc tggcgccgat
    19501 agttcaccga cgggcccatc atcttccgga gcctccgcgc gtattcgggc tggctccact
    19561 tgaggctcgc gatgtggccg gtcacccgca ccggcctgac ggtggcgagc ggctcccccg
    19621 gtttggtgag caggtgtcgc accaccagcg ccgagtggca catcatgtcg ttgagcaccc
    19681 caccgccctg cagcttgccg cgccagaacc acggcatgtg gggtccgctg tgctcctccg
    19741 ccgcgcgggc gaggtagggc cgtccggtga gcgccgcgcc gcgggcccag atgagctccc
    19801 ggccgcgctc cacctggggc gagaaggcct ggttctcgag gtagccgtgt ttcaaccgca
    19861 cgctcttcac cagctggacg acgcgcctcg cctcggcgac gttccgcgcc agcggcttct
    19921 cgcaggcgat gccgatgagc ttgccccggc ctcgcgcgat cgtgtccacg acctcctcga
    19981 cgttggcgat ccgcgcctgg ttgggaccgc agagccagat ggcatgtatc gcggggtcgg
    20041 agaccatctc gcggatggac tggtacgggc ggcaggcgcc gatgtcgagc ccgcgggcgt
    20101 aggcggcagc gcccgcggcc ttcttcgggt tcgggctcca cacgccgagc acgtcggcgt
    20161 cgcggacgcc gggccaggag agcatgtgga agcgggcgtt gaagccgctg ccgatgaagc
    20221 cgacgccgag gcggctgggc gcgggcacgg ggctcatcgg ctccagggcg gcacgacccc
    20281 gttgctccgg gcgtacgcga tcgcctgccc caggtgctcg tgcaggtggg tggtggcgag
    20341 gatccagtac tgctgccggg tcatcgtcat cccgaatatc gtgagtgatt cgttgagatt
    20401 cgcagccgtc gtctgctgca tcgcctgctt gaggtgggcg agcgagcgct ccaggtcgga
    20461 gatcgcctcg tcccgggtcg ccttccggga ctcgaacgcc tgggtcgcct tgtagtcgcc
    20521 ggccttgatg ccggtggacg cgggggcggc gaccccgacc gcggtcggga ggaaatagtt
    20581 atccgcggcc acgtgctgga acacctcgcc cacggtccgc acacccgtgc cgggccgcca
    20641 ggtccaggtg gactcgggca tcgccttggc aagcccgacc agcttctgct cggcctgggc
    20701 gacgtccttg atcaggtccg cgattacgcc gccggcctgg gcgcgggccg acgggacgag
    20761 ggcgacgatg agcgcggccg ccgcggcagc cgctcgagtg gatgaacgca tgagacctcc
    20821 tccgtgaccg cgtgaacctg ccgggaagga ccgaaactac cgccgtcctg gcgtgtcggc
    20881 tacgagggct ggtggcgggg gggtgacgga gaagggccgc cggttaccgt ttccatgacg
    20941 cggtcgatcg cccgcgtcca ggaaaaccac tcttcggcga atcgccggga tcccacgctc
    21001 aaccgctctc tcagtgcagg gtcatccagc agggcctcga tcgcggcggc catcatctcg
    21061 gggtccctgg gcggacacag caggacattc tcccggtcga caaagggagc ttccaacctg
    21121 gagctgcggg tcgcgacgac aggaaggccg tgggcaactg ccgccgcaaa ggagctgtta
    21181 ttcaactgaa cgccaacgtc catggaaaga acgaaggcgt ccgccgcgcg cagataacgc
    21241 gacccatcct gactgtccca gcggtattcc ccggtccagc ttatccggtc tgcaatgccc
    21301 agccggtcgg ccagctccag gagatcctgg ccgtaggagg gacggtccgg atctgcccgg
    21361 gccagggttc ctcccaccag gatgagccgt acctggccgc gtcgtccgct cacgatctga
    21421 aacgctttca gcagggtctc tattcccttg ccctcgtaga tgtacccgag gtaggccagc
    21481 agaaactcgg cgggccccag ccccaaggca gtccgggtgt cccggcgggc ctcctcgtcc
    21541 ggtggggcca ttgccatgat gggcggcggc gggatgagca cactcttccc gccgatcacg
    21601 ggcgaaagct ctgccagcac ggctcggtgg tgatcgctca acacgatgac ccggtcgctg
    21661 tcccgcaaca gcgtcccgta ctcgtagctc accccgggct ttccggtcag ttgcttgagg
    21721 cccaaccgga agaaccgggt cggaaagctg cgttgctttc ggagcgcgcc agtgacgttg
    21781 gcaaactggg tgacgaaaac ggcccggggc cggagaagct tcgagatggt gggggcaaag
    21841 gtgatcatcg gatggccgtg gtagatccag ccgatgtaca tgagcagcac cgcatcggga
    21901 ttgcaccacc ggaggaaccg ggccagccgg cccaggtccc accaggacca gtcccgcatg
    21961 atcgggtgaa ccttgaacgg aaaactcggc agggcgaggt gtccacgggt cgtcagcacg
    22021 tgaacctcca ccccccggtc agccaggtgc cgggcgaagt gcagcgcctg gtcggcttcg
    22081 cccgcccgca tcggcggaaa ggccgcggta atgacgagca ccttcatggg accgggatgc
    22141 cgcagccgcg aggcggagac gtcaatcgcg ctggtgagcc aggaaccagg ctatcgtttt
    22201 cgccatgccg gcgcggaacg gctgagcggc ctggaagccg aacagctctc tggctcgggt
    22261 cacctccagg cagcgccgcg gctggccgtt gggcttcgag gtgtcccact cgatcccgcc
    22321 ctggaagccg acctccgcgg cgatgagctc cgccagctcg cgaatggtga tctcttctcc
    22381 gctcccgagg tttaccggtt caggaccgtc gtaatgctcg gcggccagca gaatggcttc
    22441 cgccgcgtct tccacgaaca ggaactcgcg ggtgggcgag ccatcccccc acagggtgat
    22501 gtggccggcg ttctgcgcct tggcttcgac gcacttccga atcagcgagg gaatgacgtg
    22561 cccggtttcc aggtcaaagt tgtcgcgcgg gccgtagaga ttcaccggca gcaggtaaat
    22621 ggcattgaag ccgtactgct gccgatacgc ttgcgcctgc accagcacca tcttcttggc
    22681 taacccgtag ggcgcgttgg tctcctcggg atagccgttc cagagatcgg attcccggaa
    22741 cggcaccggg gtggacttgg gatacgcgca cacggtgccc acggcgacga atttctccac
    22801 tgcagaccgc cgcgcatatt ccagcaggtc gatccccatc accgcgttgt cgtaaaagaa
    22861 tcttcccgga ctggcgcgat tggcgccgat cccgccgacg atggcagcca gatggatgac
    22921 gagttgcggc tgggattgcc ggtagaggcg aatgacggcg tcccggtcgc gcaggtcgta
    22981 ctcccgggag cggggcacca cgatctcctg gcaaccgcgt tgcgcgagct tctcgacaac
    23041 gtgggagcca agaaaaccgg cgccgccggt caccaccacg cgccggccgg accagaagtt
    23101 cagggacact cggtatcctc gcgccaggac cttccagctg ccgggttcac ccgcgcggtt
    23161 tcccttccgc gccccgggaa ggcaagccgg ccgttccccg gatctcccga tcgataagat
    23221 acacctcggt ctgccggtct tgacccgtaa acaccccatc cggacgaaat cgccgccgga
    23281 gatccggtgg agccgtttgg aagtcggcga gtatccagat ccgcccggtc cgtaccgtac
    23341 tcagccaatg ctcaagcgca ggagcatcct ggaggaccgc cgacccggtc atgtaataca
    23401 cgagcccttt cccggtgccc aggacaaagc tccccgggct ggagaggtct acctcgtgcg
    23461 ggagcattaa aacatagtca accctgccga tgtaatggta gaagatcgac gcgacatggg
    23521 aggcgcccag caccaccacc gtatcgcgag gcagcaaatg cgccctcacg taccgtcccg
    23581 gggtctggta atcctgctga aacagttccc agctctggga ggccttgatg gggtctttgg
    23641 ggctggtgta ggatcggttc ccgatggcca gcacttgcga cgggtaaatg tcctgcgaca
    23701 gaaccgccgc caggaagacg agcgcaaccg cttcgaccac cctccgggcc ggtccgggcg
    23761 ggcgcgggcc gtccggcccc ggcctcgagg cccggctctg caccgccgtg cccagcgcgc
    23821 agagcgtaaa cgcgaacacc acaaccagca gcgggtacaa gtggaagaaa taccgcggca
    23881 cgtagtaggg ccagtagatg gcgctcgcga acagggggag cagcagacca agcgcaaccg
    23941 gaaacagata ggtcccacgg gtccgatcct ggaaaaaccg atgcccgaga aggagcagcc
    24001 cgccggcggt cacgacggaa aacctcggcc atccctggac cagccactgc agcaggtagt
    24061 catggagctt gggaaaatcc cagaaatacc gggcgaaaga aaaggatggc aggggatgca
    24121 atttcgcgta cgcggaccag aaccggaacg taagagccgc cgaagcatag accaccagat
    24181 acggcgcact cgtgagcgac gcgcgattgc ggtagctgat cagcaggtaa aggcagaaga
    24241 ggatggcggc cagcgcaaat tggtgcaaat aacacgcagc gatgaccggc agcgcaaaca
    24301 aacccggcac ccgttctgat ttgtcccgat agaccaggta gaaaagcacc ccgaccgtca
    24361 agaggaggag gccgcaaagc agcaggaaca gccgatgatc ccgggcatag agctccctca
    24421 gcaggccggt ctcgggagtg tggaagttcg ccttgatcgc gtgccggagg cgttccagga
    24481 aagggaggtc tccgcccgcc gtgccttcca tcgcaagggg gctgaaccgg gagtccagga
    24541 aacggatccc gcgcccatag aggaagcagc cgcccgccgt cagcccggcg caaagcacgg
    24601 ccgtccattt tgtgcgcgcg gcggtcgagt ccacgaaaaa gggcaccagg aaggccatca
    24661 ggagggttgc ccccagcggg gtgagcatgt aggtgagcac aaagagcggg ggtaccagga
    24721 attgccagcg acgctctcct ttgatgaagc ccttgtagaa cgcaaccagg ctgaggacgt
    24781 agaagaactg gtagacggtg taggcccggg cgtagcggga gacttcgatt tcccagaccg
    24841 aaagcgcgat caggagcgcg gccaggagcc ctgctttcgc attgaagaga gtacggccga
    24901 accagtaggt catcggaatc gtggccaccc cgaataacgc cccgggcagc cgcagggaaa
    24961 actcgttcac cccgaagacg agcgccgcag cggattgcag gtagatgaaa accaggttcc
    25021 acgcataggt tcgcccggtc ggaagcaccg ggtatccgtg ctgcaggatg ccgttgacgg
    25081 ccagggcctg atgtccctcg tcgacgatga gtccgaggtt tccgaggtgg tggatcctga
    25141 gccagaaccc gatgatgacc aggcaggaga gtgcggccgc cgcgggcact ctctccgctc
    25201 gtgcttctgg catgatggga attcaagaat gaaatgagaa ggtacgcttc ggttcaacgt
    25261 acccggcggc tgtggcggag tcaactcgcg cccgcgttgc agcatgtcga cgatgctcgc
    25321 ggccggtgca gacccacgac aggagtcccg ggccggcggc ggatggcgcg ccagatgagg
    25381 gtggaccaac cgagcctgcg gtaccggctc cgccggccgg ccgaggtccc cgcgggcggc
    25441 aggagcgccc cccacgacct ccccgccctc gcggggtgcc gggctggagg cctcacgtcc
    25501 cgtcctgctg gactgtccac ccactcgggg ctacgttggc aggggcgact gatattccta
    25561 tcttactcct gtctcgactc acgacggcgt caacgggtcc ttccgggggt ggtctatgaa
    25621 cccgagccgg gacccagggg cgttcgcgcg aagcgttcct gaacgagggt ttcttgccac
    25681 gcttcacatt gcgttgagca cgctgtggag cgccctcctc gacaatctcg acgaatgggg
    25741 atcccgtacg aacacgtcgg ggaacacctt catagcgttg cgtgcgatcc agagcgagaa
    25801 caaggcccac cgtagccctg actccactcc gagccggttc cgaatcatca ggaatgcgtt
    25861 cagagcggtc ggcggcattc ggtcgcactg ctccgcgagg actcgccggg tcggccgacg
    25921 gacaatggag gtccggctgc gcgacgatcc gccggccctt gtcatattgg acgggttcac
    25981 ggcaataacc cgattgcgcc atcggggcgc gcttggcggc ttgctcgcct accggtccac
    26041 gcgcgaactg gccatctctg gcgctcgctt ccccactccg gtcgaggccg tccgacgccg
    26101 cgaccttcgc gtgccggcgg tccccagggc cgcgatcacg ccgtgagcgt cggagctccg
    26161 gtggtcgtcg agccgccggc cgggctcttc cgcatcgggc tccggtccct gtgggagtac
    26221 cgcgaattgc tgtacttcct ggtatggcgg gacctcaagg tccgctataa acaaacggcc
    26281 atcggcgtcg gctgggccgt cctgcagcca ctgacggcca tggccatctt caccgccgtc
    26341 ttcgggcatt tcgccagggt tccgtcggat ggccttccct atcccgtctt cgtctactgt
    26401 gccctgctgc cgtggaatta tttcgcgacc gccttgaatc gctgcatctc cagcgtcgtc
    26461 ggcgatgcca acctgatctc gaagatttat ttccccaggc ttctccttcc catcgccggc
    26521 ccgatctccg ggctcgccga ttttaccgtc ccgttcgtgc tgctgctcgg catgatcgca
    26581 tggtatggca tcgcgctctc ctgggcggtc ctcaccgtcc ccctctttct catcctcgcg
    26641 ttcctgaccg cgctggcggt gggcttgtgg ctctccgcgc tgaacgtgcg ctaccgcgat
    26701 gtgggctaca cgataccatt cctcgtgcag atctggttct tcgcgacgcc cgtcgtctat
    26761 ccgctgagtc tggtgccgga gaagtaccgc ctgctctacg gcctcaatcc aatggtgggg
    26821 gtcgtcgagg gcttccggtg ggcgctgctg gggaaggcgc ggcccgagct cggcctcctc
    26881 gcagcgagtg tcgcggcggt gacgctgctg ctcgtcggcg gcctggtgtt cttccgcaac
    26941 ctggaggacc agttcgccga tgtggtgtga ccgcgatgtc ccgggatggc gctcatgagc
    27001 ggcatggcga tcagcgtcga gcatgtttcg aagcggtacc ggatcggggc gcggaagtct
    27061 cggcacgact cgctcggttc gctgctggcc gccggtgccg gggcgttgct gcgccgcggg
    27121 aggcggagcg tgaccgcggc cggcggcgag gccgatccgg gggcggagcg gagtcgaatg
    27181 ggtgcggagg acggcgtctg gtctctcaag gacgtatcgt tcgacgtgcc ccacggggag
    27241 gcgctcggca ttgtcggaca caacggtgcc ggaaagagca ccctgctccg gatcctgtcg
    27301 cgcatcacga tgccgaccag cggtcgggcc gtcctgtatg cccgggtcgg ctcgctgctg
    27361 gagatcggca ccggatttca ccccgagctc acgggccggg agaacatgta cctgagcggt
    27421 gcggtactgg gcatgaagcg cggcgagatc gatgcgaagt tcgatgccat cgtcgacttc
    27481 gccgaggtgg agcgattcct tgacaccccg gtgaagcgat actccagcgg catgtatctc
    27541 cgcctggcgt tcgccgtggc cgtgcatctc gagcccgaga tcctgatcgt ggacgaagtc
    27601 ctcgccgtcg gggacgcgcg gtttcaaaag aagtgtctga ccagaatgca ggacgtgagg
    27661 cgcgaggggc ggacggtgtt gttcgtgtcg cacaacctcc cgacggtcac gcagctctgc
    27721 aagcgagccc ttttgctcga tcacggacgg ttggtcgcag atggcccggc ggcgcaggtg
    27781 attggggcgt acgtgagccc cgtgcggcgc acggcgacgg agcgggagtg gggcccggcg
    27841 gacactccac cagggggaga cgtggctcgc ttgcgtgccg tgcggctgcg ctcggaggat
    27901 gatgagatcg cggagaccgt cgacatccgc cgccccttcg ccctcgagat ggagtacgac
    27961 gtgctcatcg gcggagccgt cctcctgccg tacgtgaacc tccatgacga agcgggggtg
    28021 ttcctgttct cggcgcacga tctcgatccg gactgggagg gccggccgcg gccggcagga
    28081 cgctggttga gcgttgtcca gataccggcg aacctgctgg cggagggaac ccacacggtg
    28141 gggttcgggc tggtgacgct ggatcccgtc gtcaaccagt tcgacgagcg tgacgtgttg
    28201 tccttccggg tggtcgagcc ctccccggac gggaccgccc gcggcggctg ggtgggcccg
    28261 atggatggcg tggtacggcc ggccctgcaa tggcgcacga cgctcctgcc ggcatgagga
    28321 ttctcctcgt cagcaatctc tacccgcccc actatatcgg cggctacgag ctgcgctgtg
    28381 cgcaggtcgc ggaatacctg cggctggccg gccacgagac gcgggtggtg acgagcttcg
    28441 cgaacctgcc gggtgtgccg gccggctcgc tttcgcagga agccaccggc gagggaacca
    28501 cgccggtcga gcgatggctg cggtatcaca ctctcgatcc cctgccggcg cagcgccggc
    28561 gcaccctcgc gatggcgaga agccagttgc acgaggcgcg tcgcttcaac cgtctgctcg
    28621 ccgactggcg gccggacgtc gtgaactggt ggaacctcga aggcctgacc aagacgatcc
    28681 tgccgctgcc cgccgcccgc ggcattcccg atgtccactg ggtggaggat acctggctga
    28741 ttcgcgagta cggcgcgaac ggggagaagg aatcgttgca ctggttcgac ttctggcgcg
    28801 ggcgctggac accgccggct ctgcggccgg ccctggtggc gggcctggcc gtgtgggagc
    28861 ggtgggtgcg ccgcgagggc attgcgactc gacccttccc gaaccgcccg cgtcacgtgt
    28921 gcttcgtgag cgagttcatg cggttggagc accagcgcgc cggcctgacc tggccctcgt
    28981 catccgtcat tcacggcggg gtcgccgccg agcgcttcca cctgcgacga accccgacgg
    29041 agtttgccga gggcaccctt cgcctcctgt atgcgggcta tgtggagccc aatcgcggcc
    29101 ttcacacgat catcgcggcg ctggggctcc tgccgcaaac gctgcgcgac caggtgcagc
    29161 tcaccgtcgc gcacacggag cggccgaagg aagagtggta cctgagcgac atcaagacga
    29221 gcatcgaacg cctcggtctg ggcaacacgg tcaggttcat cggcagaata ccgcacgagg
    29281 cgatgcccgg cgtgtacggg acgcagcacg tcctggtttc ggcgacgacc agggcggaag
    29341 ggctgccgat gacgatgatg gaggccatgt gcgccggctg tgcggtcatc acgaccggca
    29401 gcggcggcgc ccaggagatc gccgacctgg ccggtctgcc gctgtttccc ggggatcatc
    29461 cagcggcact cagcgggctg atcgccaggc tcgcgacgga tcggcggtgg gccttcgagg
    29521 tcgcggtgcg agggcaggag gcggtcctga agcacttcag ctgggcgcgg atggcggagg
    29581 ccctcgggag gacccttcac gggctcgcgg aggagtccgc cgcccggcgc ggggtccgcg
    29641 gcgagggggt gacgcacgag ggggcacctc acccggcggt ccgctgatga ggatcctgca
    29701 cgtaactccc acgtacgcgc ccgcgctggg cggagcggag caccacctca aagcggtatc
    29761 ggagagactg gtcgcgcgcg gacacacggt caccgtcttc acggcgaatg tcaccgaagg
    29821 gcagagcgcc tggatgagcc ggtacagcgg attgccgcag gaggagatca tcaacggggt
    29881 gcgagtagtg cgctttgatc cacggcacgg gctgctcgca aaagctttcg accgtctgct
    29941 tgaggtgaga ggtggatggc gcaccgtctc gaccctcctg tctccggctg ggcgcgaatt
    30001 gctcattcag ggaccccgaa cgctgaacat gatcggcgcg atactcagag cgaaggccga
    30061 tgtcgtggtg tcggtgaact ggttctggcc ccaggcgtac cacgcacacc tggcgagaag
    30121 tttcaggcgc tttcggctcg tcggcatgcc gctgttccac accacacagg cgtggtgcag
    30181 ccgtcccgtc tacgacagga tgctggcgcg gtgcgatgcg gtcatcgcga tgaccgggca
    30241 cgagaaggac tacgccgaag ggcgaggggc gaccaccgtc gacgtcgccg gcgccggcgt
    30301 gacgccacgg gatctggagc cgcgagatgg agctcaggtg cgggcacgct acggcctgcg
    30361 cgacctccct gtcgtggggt acgtcggcca gcagctggcg gcaaagggcg tcgcgaagct
    30421 gatcgaggcc atgccctggg tgtggcagtg gaacccggag gtgcggctcg tgctggccgg
    30481 taagagcgtg ggggacccgg aggtggaagc cgcgctgcgg agcctgtccg ccgctcatcg
    30541 agcgcgggtt gttgagatcg gccggttcga ggatggcgaa aaggcctcga tcttcgatgc
    30601 gttcgacgtc ttcgccatgc cctcgaagga ggattctttc gggatcgtct atctcgaagc
    30661 ctggctgtgc aggaagccgg tcatcggtgc gcggaccggc tccacccagt gcgtgattga
    30721 cgaaggccag gatggtcttc tggtggatcc cgagaacgcg gaggacatcg cccgggccat
    30781 cgtgtccctc c
//
LOCUS       DASYRV010000205         3117 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2154789, whole genome shotgun sequence.
ACCESSION   DASYRV010000205 DASYRV010000000
VERSION     DASYRV010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3117
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2154789"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1319
                     /locus_tag="VGQ24_05290"
     CDS             <1..1319
                     /locus_tag="VGQ24_05290"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF002074.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0019538 - protein metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEV8454280.1"
                     /translation="TAVIYPSGLASRVLLVGLGKPDEIDRTAIRRAAAVAAKKTRSLG
                     VSHAAFYLPPEARGKVPPAEVGQSIAEGLAQGAWQFNEMKKPNEDKKPPLERFDLLAH
                     DGPAELIRGHKTGEAIGAGQTFARGLQVLPGNVATPTYIANVARELAQRHGFGVTILD
                     KAAIIKEKMGALLSVAQGSAEEPRFIALEYKGSDTAPVVLIGKGVTFDTGGISIKPAQ
                     NMEDMKYDMSGAAAVLGTFEALGRLKPKVHVVGLIPSTENMPSGTAVKPGDVITSHLG
                     KTIEVINTDAEGRLILCDALSYARRYKPAAVVDIATLTGAIVVALGHSAAGVMGTDEK
                     LVEEVRQAGERAGERVWELPLWDDYRDLMKSDIADVKNTGGRPAGSISAGWFLREFVD
                     GFPWAHLDIAGTAYTERDEPARVKGPTGIGVRLFTEFVLAREQRKA"
     gene            1448..>3117
                     /locus_tag="VGQ24_05295"
     CDS             1448..>3117
                     /locus_tag="VGQ24_05295"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEV8454281.1"
                     /translation="MRWLVPLTFFLVPLTLFVQPAVAQIPDEDRYPEDTLSDTLYRDT
                     VNTTARFLKEQERVSVRAPVLPMLGVEGPKPALTRIVFNRDSIEWGHAATVGDLLTQV
                     PGVYLWRGGFIGRPEPVNYHGRGSASAEYYLDGMPYVPAGPDSLAVDPALFDISFLDR
                     IEVERWPGQLRVYLFTRRHDRLAPRSRIGIARGDNNFARYEASLERRFINGLGFSAAA
                     DYLSTPNMSVRSSAYSNTQIWAQGSYIPSPRFGVQYQLIRSAPNRRPFVIDNAGVDDT
                     IGIGYKARRTDAQIRLSLGSSKATEGLGPRLDVVYNRSAWTGGGLDQQINQIGGYLSY
                     RVSSLSLVGSAFHRTRWTPLDTRASLGWNPVGPFTVSAELVHQRHFGGRNSDYADLAA
                     GLQIARGLALTGTARLGQMVAAPAILSDTAQDVRDFQGALGWDRARLGFQVAYARTSE
                     FAPFAYADFPRIAGFTPAPETEWITASARIAPLQWITLESWFSDSRDVSPDGVPPTHS
                     VSAATIRSKFLRQFPSGIFDLKLRLSVESWGRGTIGRDALGTPVVLKGA"
BASE COUNT          530 a         1056 c         1035 g          496 t
ORIGIN      
        1 agacggcggt tatctaccca tccggcctcg catcccgcgt gctgctggtc ggcctgggca
       61 agcccgacga gatcgatcgt accgccatcc gccgcgccgc cgctgtcgcc gccaagaaga
      121 cgcgctcgct cggtgtctcc catgccgcct tctatctccc ccccgaagcc cggggcaagg
      181 tgccaccagc cgaggtgggg cagtcgatcg cggagggact ggcacaggga gcctggcaat
      241 tcaacgagat gaagaagccg aacgaggaca agaagccacc actcgagcga ttcgacctcc
      301 tggcccacga cggcccggcc gagctgatcc gaggacacaa gaccggcgag gcgatcgggg
      361 cggggcaaac cttcgcccgc ggtctccagg tgctgccggg gaacgtcgcg acgccgacct
      421 acatcgccaa cgtcgcccgg gagctggccc agcggcacgg cttcggcgtc accatcctgg
      481 acaaggccgc gatcatcaag gagaagatgg gtgcgctgct ctcggtggcg cagggcagcg
      541 ccgaggagcc gcggttcatc gcgctggagt acaagggctc ggacacggca ccggtcgtct
      601 tgataggaaa gggcgtcacc ttcgacaccg gcgggatctc gatcaagccg gcccagaaca
      661 tggaggacat gaagtacgac atgtccggcg ccgccgccgt gctcggcacc ttcgaggcgc
      721 tgggccggct gaagccgaaa gtccacgtcg tggggctgat tcccagcacc gagaacatgc
      781 ccagcggcac agcggtgaag ccgggcgacg tgatcaccag ccacctgggc aagacgatcg
      841 aggtcatcaa caccgacgcg gagggacggc tcatcctgtg cgatgcgctg tcgtatgcca
      901 ggcggtacaa gccggcagca gtggtggaca tcgcaaccct caccggcgcc atcgtcgtcg
      961 ccttgggtca ctcggccgcc ggcgtgatgg gcaccgatga gaagctggtc gaggaggtac
     1021 gccaggccgg cgaacgggcg ggggagcggg tctgggagct gccgctgtgg gacgactatc
     1081 gtgacctgat gaagtccgac atcgccgacg tgaagaacac cggcgggcga ccggccggca
     1141 gcatctcggc aggctggttc ctccgcgagt tcgtggacgg attcccctgg gcccacctcg
     1201 atatcgcggg cacggcgtac accgagcggg atgagcccgc gcgggtgaag gggcccacgg
     1261 ggatcggtgt gcggctgttt accgagtttg ttctggcccg tgaacagcga aaagcgtgag
     1321 cgggactagg acaagcgtga gcggtaagcg ggcgactgtc attctgagcg cagcgaagaa
     1381 tctctccagg cgcattcgag ggatccttcg gtccccctcg ctgcactcgg cgtccctcag
     1441 gatgacaatg cgctggcttg tcccgctcac gttctttctt gtcccgctca cgctttttgt
     1501 tcagcctgca gtcgcccaga tccccgacga agaccggtac ccggaggaca ccctctccga
     1561 cacgctctac cgggacaccg tcaacaccac cgctcgcttc cttaaagagc aggagcgggt
     1621 aagcgtccgg gcaccggtgc tcccgatgct cggggtcgaa ggtccgaagc cggcgctcac
     1681 ccggatcgtg ttcaaccgcg actcgatcga gtggggccac gccgctacgg tcggcgacct
     1741 gctgacccag gtccccggcg tctatctctg gcgcggcggg ttcatcggcc ggcccgagcc
     1801 ggtgaactat cacggccggg ggagcgcgtc ggcggagtac tacctcgacg gcatgccgta
     1861 cgtgcccgcc gggcccgata gccttgcggt cgatcccgcg ctcttcgaca tcagcttcct
     1921 ggaccggatc gaggtggagc gatggcccgg gcagctccgg gtctatctct ttacccgacg
     1981 gcacgaccgg ctggcgccac gctcccgcat cggcattgcc cgaggtgaca acaactttgc
     2041 ccgctacgag gcgtcgctgg agcgccgctt catcaacggg ctcggcttct ccgctgccgc
     2101 cgactacctg agcacaccga acatgagcgt ccggagcagt gcctactcca atacccaaat
     2161 ctgggctcag ggcagctata tcccgtcgcc ccggttcggc gtgcagtacc agttgatccg
     2221 ctcggcgccg aaccggcggc cgttcgtgat cgacaacgcc ggggtggacg atacgatcgg
     2281 gatcggctac aaggcgagac gtaccgatgc ccagatccgg ctctcgctcg gctcgagcaa
     2341 ggcgactgag ggcttggggc ctcgcctcga cgtggtctac aaccggagtg cgtggaccgg
     2401 gggagggctg gaccagcaga tcaaccagat cggcggatac ctctcctacc gcgtctcgag
     2461 cctctccctc gtgggctccg ccttccaccg gacccggtgg acccctctcg acacccgggc
     2521 gagcctgggc tggaacccgg tagggccgtt caccgtctcg gccgagctgg tgcaccagcg
     2581 gcatttcggt gggcggaaca gcgattacgc cgaccttgcc gcgggtcttc agatcgcgcg
     2641 cggactcgcg ctcaccggga cggctcgcct gggacagatg gtcgccgctc ccgccattct
     2701 ctccgacacc gcgcaggacg tgcgcgactt ccagggcgcg ctgggctggg accgggcccg
     2761 gctcgggttt caggtagcct acgccaggac atcggagttc gcgccgttcg catatgccga
     2821 cttcccccgc attgcaggct ttacgcccgc tcccgagacc gaatggatca ccgcgtcggc
     2881 ccggatcgcg ccgcttcagt ggatcacgct ggagagctgg ttcagcgact cgcgggacgt
     2941 ctcaccggac ggggtgcctc cgactcactc ggtcagcgcc gcgacgatcc gctccaagtt
     3001 cctgcgccag ttccccagcg ggatcttcga cctgaagctt cggcttagtg tggagagctg
     3061 gggcagggga acgatcggac gagacgcgct cggcacccca gtcgtcctca agggtgc
//
LOCUS       DASYRV010000206        10762 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_911890, whole genome shotgun sequence.
ACCESSION   DASYRV010000206 DASYRV010000000
VERSION     DASYRV010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10762
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_911890"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            136..948
                     /locus_tag="VGQ24_05300"
     CDS             136..948
                     /locus_tag="VGQ24_05300"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEV8454282.1"
                     /translation="MQVASDLLKSAWYRARGSRPFTTGYGAYKEGQVRGVLDRGEFHL
                     DRLPDSYGLNLDERIVEYPWLLAHLPPGPGLLLDAGSALNFRFLLSRPTLADKTIYIC
                     TLAPERHSFWREGISYTFQDLRCTCFRDAFFDHVVSLSTLEHVGLDNARFYTNGTRAE
                     RDPSGYVAAVREMARVLRPGGRLYLSVPYGRHADLGWLQVFDGGMLDRVIEAFRPSGV
                     LEQVFQYTPTGWRLSDRRDSAGAMYVDLHTTPGWRRGQPVAAESVACIALTK"
     gene            945..2048
                     /locus_tag="VGQ24_05305"
     CDS             945..2048
                     /locus_tag="VGQ24_05305"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HEV8454283.1"
                     /translation="MRVGLDGRALQGRRTGVGRYVFEICRELDTLIPEAEFFVYTPEL
                     VELPVTSGRWRCRVEPRRWARGLKPIAWLKLRAGRLCQEDRLDVFWASATLLPPLPPE
                     VRRLTTVYDLTFRIAPETMGPTHLMAHRMFFGPDVRRADQRLAISHGTAARLQSWLGG
                     PLAAVAPPAVSPVFRPSGTETIKGVLSAFGISQPYFLAVGTWEPRKNLELLIRVFRTM
                     QSEGELGGYRLVLAGGAGWKDQRFRALLRETSSAAGSLDSVLPLGFVTDQQLAQLYSG
                     CRAFVFPSRYEGFGLPVLEARACGATVLASDLPEVREAGGEDAVYVPPTAEGLREGLR
                     RVITRSRSPALASSRLPTWRGSAAVLARYLHAD"
     gene            2038..3375
                     /locus_tag="VGQ24_05310"
     CDS             2038..3375
                     /locus_tag="VGQ24_05310"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HEV8454284.1"
                     /translation="MQTDGHSGTLGWLLAGLAFSLCLGAMVGLDSLGGLAIRPYLPLL
                     VLAAIIIAARAARRGYLPPVSAKGSLPALGVLLVAALLSIFNAEYVGEAVKQAVFLTG
                     MAGIYASLLLAELDDRDLWRMTLAIIWSLLAAVGFGFVQFAREYASSGSVVSAFVQFH
                     SFFQERNEFGLFMVYAVGFLIPLALNDEAPFRYKVLLILTGLTLLLNFSRGSLLAVAG
                     MLVLDRLGSGHLFASRRAGRSLLILAGLAFAAAASVLVLVPALAGLPEFLDVLTTRAV
                     GFRPSGDETTSIRLLFIQTAARAFMAHPLIGSGIGNVGFVLNHFGRGADYGRVTLHGA
                     VQPPQYDLGTTSNLLADLLLEIGLLGLLSFLVFLGAVARASITRARGQGRMGLVHAGA
                     LLSLAGLLINGLSYNSLYLPFTWVALALAPLAAGRLRSAATAAPRPAAPVPVA"
     gene            3375..4478
                     /locus_tag="VGQ24_05315"
     CDS             3375..4478
                     /locus_tag="VGQ24_05315"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HEV8454285.1"
                     /translation="MLAPSRNTIAVDARMIGASGIGTCIAELLPRLIAAKPELEFVLL
                     GSRRVLAVLPWTRAPNARVIEFNAPIYSIREQIALLRWVPKRTDILWSPHYNSPVAWR
                     GRLVVTIHDLAHLALPEFVGGPHRRAYARFMFDRVSRSADAIMTDSEFTRAEFVRLVG
                     VRRAEPQVVHLGVDREWFEIPRSPSPHPRPYLLYVGNVKPHKNLGRLLQAFEQLASGI
                     SCDLLILGKNEGFLSEDGGGRAAAERLAPRVQLLGALPQDLLKRYVSHAEAVVQPSLY
                     EGFGLPPLEAMAAGCPTIVSRTASLPEVCGDAALYFDPLDPGSIAEAVLRLLRQPELR
                     ATLRCRGLERARHFTWDRSAEAALTVLERVLAG"
     gene            4475..5614
                     /locus_tag="VGQ24_05320"
     CDS             4475..5614
                     /locus_tag="VGQ24_05320"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEV8454286.1"
                     /translation="MKIAIVHDWLVTYAGAERVLEQMLALYPDADLYSLIDFLPDTER
                     QFLRGRPVRTSFLQQIPGARKHYRKYLLLMPLAIEQFDLANYDLVISSSYAVAKGVLT
                     GPDQLHICMCYSPMRYAWDLQHQYLRETGLDRGLRSVFARAVLHYMRNWDVRTGHGVD
                     EFIAISEFVARRIRKVYRREAAVIYPPVDVREFTPGQPKDAFYLTTSRLVPYKRIDLL
                     VEAFSGMPDRRLVVVGDGPELRRIRSKAGSNVTLLGAQPLPVLRDHLQRARAFVFAAE
                     EDFGIAPLEAQACGTPVIAFGKGGSLETIRGLEHPQPTGVFFNEQTVPAVQHAVQLFE
                     REQHRISPAACRENALRFDSDRFRGEFGELVRTKYCSFRKAQGHA"
     gene            complement(5618..6982)
                     /locus_tag="VGQ24_05325"
     CDS             complement(5618..6982)
                     /locus_tag="VGQ24_05325"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HEV8454287.1"
                     /translation="MAGDAAALLVLRVVLRGVRDESWLGAAVASVVNSLVPQGALPLV
                     QLLPAVLLGLIALDTYGASDRRRDAGRLVAGGTLGLGLPFWGHLWNHFSPLLLPGFIL
                     VAGVIGMTLIIERYLIDHAVRKLWPIGTGAARALLIGPPEHTTRALEHPSLSDARAFA
                     FGGILDPNEFGLQSGHSGFSHLCQTIKLYRADTIVLSGPLDDQALALVIDAAGAAGCQ
                     LYAIPRSFVLGGVESRMVWSRGAPLVALNRPGLRGRQLLVKRTLDIVVAGLGMILLSP
                     IFVLLSLAVYISSPGPIFFRQTRVGLGGRLFKIMKFRSMVPDAEARLDDLTPKSLYSD
                     RRLFKVKNDPRVTRLGTFLRRSSLDELPQLWNAFIGNMSLVGPRPPLPSEVDLYEEHH
                     YTRFDVKPGITGPWQVNGRNTITDFEEVIRLETDYIREWTLWKDLGILLRTVPAVFRM
                     EGAH"
     gene            complement(7575..8540)
                     /locus_tag="VGQ24_05330"
     CDS             complement(7575..8540)
                     /locus_tag="VGQ24_05330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HEV8454288.1"
                     /translation="MPPADKILETARRVLRLEAAAVAALESRLGHPFVQAVEAILNAS
                     GRVIVSGVGKSGIIGRKIAATLTSTGTPAIFLHAMDALHGDLGIVGKADVALLLSKSG
                     ESAELLGLLECLGRFGVTVIGLTGSLDSTLGRQAKIVLDCSVEEEACPYNLAPTTSTT
                     AAAALGDALAVSLLVQRGFREEDFARLHPGGRLGQRLLRVRDVMVTEGIPILPPTAKM
                     RECVVLLAEKRGTVAVVNERSCLLGVVTSGDLTRLMEREEHFLAVPVADVMTRTARTA
                     QPDQLAAVAVGIMERHRVMALPVLEDEGRVIGFVHLHDLMRAGAL"
     gene            complement(8545..9606)
                     /locus_tag="VGQ24_05335"
     CDS             complement(8545..9606)
                     /locus_tag="VGQ24_05335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEV8454289.1"
                     /translation="MFITKPFVTDRRIRFALVGCGRISANHFDAIEKHAERAELVGVC
                     DVDPAALAQAVERTGAPAFRSLDALLAGTDADVVILATPSGLHAEQAIQVAAAGRHVM
                     TEKPMATRWRDGKRMVHACDNAGVHLFVVKQNRRNATLQLLKRAVQKGRFGRIYMVNI
                     NVFWSRPQSYYDSAPWRGTWEFDGGAFMNQASHYVDLLDWLIGPVESVQAYTATLERD
                     IQVEDTGVVSIRWRTGALGSMNVTMLTYPKNLEGSITIIGEKGTVRVGGVAVNRIDHW
                     EFADSDPDDQKAQQASYETASVYGFGHPAYYDNVIQSLRGEAVPDTDGREGLHSLEIL
                     IATYQSARDGRRVALPLEY"
     gene            9775..>10762
                     /locus_tag="VGQ24_05340"
     CDS             9775..>10762
                     /locus_tag="VGQ24_05340"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HEV8454290.1"
                     /translation="MATATPPVSAKAVYPAEAVAKLIAPPEPEEPADKLRRLLQEART
                     RKSYLHTAGAYDAFTAAIMTRLGFKALYGSGWQLAATKSMFPDIGVYASHDMVKLVHE
                     MWLGIEGARNTHFYETEGKEVLQAPPAFVDMEAGFGGPTQTFTLAVELIRARAAGVHL
                     ENQDPANRTCGHIVNVGKQKRNKVLVPRKDWLAKLKAIKAASQATGVEVVIIARTDSI
                     DGALPDREPGGVKTAVEDAWEAAELGVDVIWPEFNNTELEQPQEFAEGVRKYYPDQML
                     GFNLSPSLYFGKAKKAGTLITNQQLADLGFVLQFSTLFNFRTAGMALEKGLRK"
BASE COUNT         1813 a         3530 c         3426 g         1993 t
ORIGIN      
        1 gggattggac gtcatctgtg acggaatact cttcaaccgg ccgttcacct atccggccga
       61 gaccgagacc agcgccgaag acgccgccgc caagatcctg gcctccacac cggcacgatg
      121 atcaacggaa acgctgtgca ggtcgcttca gacctcctga aatcggcctg gtaccgggct
      181 cgtggcagcc gccccttcac taccggctac ggcgcatata aggaagggca ggtccgcggg
      241 gtgctcgatc ggggggagtt ccatctcgac cgcctgccgg acagctacgg tctcaacctg
      301 gacgagcgta tcgtcgagta tccctggctc ctcgctcatc tgccgcccgg ccctggactc
      361 ctgctcgacg cgggatcggc cctgaacttt cgctttctct tgagccgtcc gaccctcgcc
      421 gacaaaacga tctacatctg tactctggcg cccgagcgcc acagcttttg gcgcgagggc
      481 atctcctaca ctttccagga tctccgttgc acgtgcttcc gcgacgcgtt cttcgatcac
      541 gtggtcagcc tgtccacgct ggagcacgtg gggctggaca acgcgcgatt ctacaccaat
      601 ggcacgcggg ctgaacgcga tccctccggc tatgtggccg ccgtgcggga aatggcgagg
      661 gtcctccgtc cgggcgggcg gctatacctc agcgtgccct atggccgcca cgccgacctc
      721 ggctggctcc aggtgttcga cggcggcatg ctcgatcggg tgatcgaggc cttccgacca
      781 agcggtgtgc tggagcaggt gtttcagtat acgccaacag gctggcggct cagtgaccgt
      841 cgcgattcgg cgggcgcgat gtatgtcgac ctgcacacga ctcccggctg gcgacggggg
      901 cagcctgtgg ccgccgaatc ggtggcctgc atcgcgctca cgaaatgaga gttgggctgg
      961 atggccgtgc gctgcaaggg cgtcgcacgg gagttgggcg gtacgtcttc gagatctgtc
     1021 gggagctcga taccctcatc cccgaggcgg agttcttcgt atacaccccg gagctggttg
     1081 agcttcccgt cacatcgggc cggtggcgct gccgcgtcga gccgcgccgc tgggcgcgag
     1141 gcctcaagcc catcgcctgg ctcaagctcc gggcgggccg gttgtgccaa gaggatcgcc
     1201 tcgacgtctt ctgggcctcg gctacgctgc taccacccct tcctcccgaa gtgcggcggc
     1261 tcacgaccgt gtacgacctc accttccgaa tcgcgcctga gacgatgggg ccgactcacc
     1321 tgatggcgca ccggatgttc tttggcccgg acgtgcggcg cgccgatcag cggttggcga
     1381 tctcgcacgg caccgcagcc cgtcttcagt catggctcgg gggaccgctc gcggcggtgg
     1441 cgccgccggc cgtatcgcct gtcttccggc cctccggcac cgagaccatc aagggggtac
     1501 tcagcgcgtt cggcatctca caaccgtatt tccttgcggt cggcacctgg gagccacgca
     1561 agaacctcga gctcctgatt cgggtgtttc gaacgatgca gtcggaagga gagttagggg
     1621 gataccggct ggtcctggct gggggcgccg gctggaagga ccaacgattc cgcgcgctcc
     1681 ttcgggaaac ctcgagtgcc gccgggagcc tcgattcggt gctgcctctc ggcttcgtca
     1741 ccgatcagca gctggcccag ctctactctg gctgccgagc tttcgtcttt ccctcgcgct
     1801 atgagggatt cggacttccg gttctggagg cgagagcgtg cggagccact gttctcgcga
     1861 gcgacctgcc cgaagtccgg gaagcggggg gcgaggacgc agtctacgta ccacctactg
     1921 ccgaagggct ccgcgagggc ctgcgccgcg tgatcacccg ctctcggtct ccggcgttgg
     1981 cctccagtcg ccttcccacg tggcgtgggt cggcagccgt cttagcgcgc tatctccatg
     2041 cagactgacg ggcactccgg aactctcggc tggctcctcg cggggctggc cttctccttg
     2101 tgtctcggcg caatggtcgg gctcgacagc ctgggaggac tggccatccg gccttacctc
     2161 cctctgctcg tgctggccgc gatcataatc gcagcccggg ccgcccggcg ggggtatctc
     2221 ccgccggtat cggcgaaggg gtccctcccg gcactcggcg tgctgctggt cgcggccctg
     2281 ttgtccatct tcaatgcaga atacgtcggg gaagccgtca agcaggcggt ctttctcacc
     2341 ggcatggcgg gtatttacgc cagcctgctg ctcgcggagc tggatgaccg agacctgtgg
     2401 cggatgacgc ttgccatcat ctggtcgctc ttagctgctg tgggattcgg cttcgtgcag
     2461 tttgcccgag agtacgccag cagtggaagc gtggtatcgg ccttcgtgca gtttcacagc
     2521 tttttccaag agcgaaacga gttcgggctc ttcatggtct atgcggtcgg cttcctgatc
     2581 ccgctggctc tcaacgacga agctccgttc cgctacaagg tcctactgat cctcacgggg
     2641 ctcaccctgc tgctcaactt cagtcgcgga tcgctgcttg cggtcgccgg gatgctagtg
     2701 ctggaccggc tggggtccgg gcatctgttt gcatcccgca gagcgggccg ttctcttctc
     2761 atccttgccg gattggcctt cgcggcggcg gcgagcgtgc tcgtcctggt acccgccctt
     2821 gccggcctcc cggaatttct cgacgtcctc acgacccgag cggtgggctt ccgaccgtcg
     2881 ggcgacgaga ccacgtcgat ccgcctgctc ttcatccaga ccgccgcgcg cgctttcatg
     2941 gctcatccgc tgatcgggag cggcattgga aacgtaggtt tcgttctcaa ccacttcggc
     3001 cgcggggcgg attatggcag ggtgacgctc catggcgccg ttcagccacc ccagtacgat
     3061 ttgggaacga cctccaacct tctggctgac ctgctgctgg agatcgggct cctgggcctg
     3121 ctttccttcc tggtctttct cggcgctgtg gcccgcgcct ccatcacccg cgctcgcggc
     3181 cagggccgca tgggactggt gcatgccggt gccctgctct cgcttgcagg gctgctgatc
     3241 aacgggctga gctacaattc gctctatctc ccgttcacct gggtcgccct ggcactggca
     3301 ccgctcgccg ccggacggct gcggtccgcc gcgaccgcgg cgcctcgtcc tgctgctcct
     3361 gtcccggtgg cctgatgctg gccccgtcgc ggaatacgat cgcagtcgac gcccgaatga
     3421 tcggcgcctc cggaatcggc acctgcatcg ccgagttgct accccggttg atcgctgcga
     3481 agccggagct cgagttcgtg ctgctcggtt cccggcgcgt cctggccgtg cttccgtgga
     3541 cgcgggctcc taacgcccgg gtgatcgagt tcaatgcacc gatttactcg atcagggagc
     3601 agatcgctct ccttaggtgg gtacctaaga gaaccgatat cctctggtcg ccccactaca
     3661 acagtccggt tgcctggcgg ggacgcctgg tggtgacgat tcacgacctg gcgcacctcg
     3721 cgctgcccga gttcgttggc ggaccacatc ggcgggccta cgcccggttc atgtttgata
     3781 gggtcagccg ctcggccgac gcgatcatga ccgactcgga gttcacccgg gcggagttcg
     3841 tgcgtctggt cggcgtccgg cgagcggagc cgcaggtggt gcacctcgga gtggaccgcg
     3901 agtggttcga gattccccgg tccccgtcgc ctcatccgcg gccctacctt ctctacgtag
     3961 gcaacgtgaa gccgcacaag aatctgggcc gtctgctgca ggcgttcgag caactggctt
     4021 ccgggatctc gtgcgacttg ctgatcctcg gtaagaatga agggtttctg agcgaggatg
     4081 gcggcggccg ggcggcggcc gaacggctcg ctccgcgagt tcagttgttg ggcgcccttc
     4141 cccaggacct gctcaagcga tacgtctccc acgccgaggc ggtggtgcag ccctcgttat
     4201 acgagggctt cggtcttcct cccttggagg ccatggccgc tggatgcccc acgatcgttt
     4261 cgcgcacggc ctcgctacca gaggtttgcg gagatgcggc gctctacttc gatccgctcg
     4321 atcccgggag cattgcggag gccgttctgc ggcttctccg ccagcccgag ctccgcgcga
     4381 cgctccgctg ccgggggctg gagcgcgccc gtcacttcac ctgggaccgg tcggccgaag
     4441 ccgcgctgac cgtactggag agggtgctcg ccggatgaag atcgcgattg tgcacgactg
     4501 gctggtgacc tacgcggggg cggaacgcgt cctcgagcag atgctcgcgc tctaccctga
     4561 tgcagacctg tacagcctga tcgacttcct gcccgacacc gagcggcagt tcttgcgcgg
     4621 cagaccggtc cgcacctcgt ttctgcagca aatccccggc gcgcgcaagc actaccgcaa
     4681 atacctgctg ctcatgccgc tggccatcga gcagttcgac ctcgcaaact acgacctcgt
     4741 catttccagc tcgtacgcgg tcgctaaggg cgtgctcacg gggccggatc agctgcatat
     4801 ctgcatgtgc tactcaccca tgagatatgc ctgggatctc cagcatcaat atctccgcga
     4861 gaccgggctc gatcgcgggc tacgttctgt gtttgcgcga gcggtcttgc actacatgcg
     4921 aaactgggac gttcgcaccg gccacggggt cgatgagttc atcgcgattt ccgagttcgt
     4981 ggcgcgccga atccggaagg tttaccggag ggaggcggcg gtcatctacc cgcccgtgga
     5041 tgtgcgggag ttcacgccgg ggcagcccaa ggacgcattt taccttacca cgtcgcgcct
     5101 ggtcccctac aaacggatcg atcttttggt ggaggccttc tcaggtatgc ccgaccggcg
     5161 cctggtggtc gttggagatg gtcccgagct gcgtcgtatc cggtccaagg ctggctccaa
     5221 cgtgactcta ctgggggccc agcctctgcc ggtgctgagg gaccacctgc agcgggctcg
     5281 ggcatttgtg ttcgcggcag aggaggactt cggaatcgcg ccgctggagg ctcaggcgtg
     5341 cggcacgccg gtgatcgcct tcggcaaggg gggctcgctc gagacgatcc gggggctgga
     5401 gcatccccag cccaccggtg tcttcttcaa cgagcagacg gtccccgccg tgcagcatgc
     5461 cgtgcagctg ttcgagcggg agcagcatcg catctcacca gcggcgtgcc gggagaatgc
     5521 gttacgattt gacagtgacc gatttcgcgg tgaattcggg gagctggtgc gaaccaaata
     5581 ctgcagtttc agaaaggctc agggacacgc ttgatcgcta gtgagctcct tccatccgga
     5641 agacagccgg cacggttcgg agcaggatcc ccaagtcttt ccagagggtc cactccctga
     5701 tgtagtcggt ctccagccgg atgacttcct cgaaatccgt aattgtgttt cgcccgttga
     5761 cctgccatgg accggtgatc cccggcttta cgtcgaacct ggtatagtga tgctcctcgt
     5821 acagatcgac ctcgctcggc aggggcggcc gcggtcccac cagggacatg ttcccgatga
     5881 aggcgttcca cagctgcggc agctcatcga gactggagcg ccggaggaac gtgcccagtc
     5941 gagtaacccg cggatcgttc ttcaccttga acagccggcg atcgctgtac aggctcttgg
     6001 gagtcaggtc atccagacgt gcctccgcgt ccggcaccat gctgcggaac ttcatgatct
     6061 tgaacagcct gccgcccagt ccaaccctgg tttgccggaa gaagatcggc cccggcgagg
     6121 agatgtagac tgccagcgaa aggagcacga atatcgggct gagcagaatc attcccagac
     6181 cggcgacgac gatgtcgagg gtgcgcttga ccagcagctg cctgccccgg agcccgggcc
     6241 ggttgagtgc gaccagtggg gcgccccgac tccagaccat ccgggactcg actcccccaa
     6301 ggacgaatga ccggggtatc gcgtagagct ggcagccggc cgcgccggct gcgtcgataa
     6361 cgagcgcaag cgcctggtcg tccaatggac cgctcagcac gatggtgtcg gcgcgataca
     6421 gcttgatggt ttgacacagg tggctgaagc cgctgtgtcc tgattgcagc ccgaactcgt
     6481 tgggatccag aatgccgccg aacgcaaacg cccgcgcatc cgagaggctc ggatgctcca
     6541 gcgcccgcgt cgtatgctcc ggtggcccga tgaggagcgc gcgagccgca ccggtcccaa
     6601 tgggccacag cttccgcacg gcgtgatcga tgaggtatcg ctcgatgatg agcgtcatcc
     6661 cgatcactcc cgcgaccagg atgaatccgg gaagcaataa cggcgagaag tggttccaga
     6721 gatgccccca gaacggcagc ccgagtccca gtgtcccacc ggccaccagc cggccggcat
     6781 cgcggcggcg gtcgctcgcc ccgtacgtgt cgagcgcgat aaggcccagg agcaccgccg
     6841 gaaggagctg aaccagcggc agagccccct gcggtaccag actgttcacc accgatgcga
     6901 ctgccgcccc taaccaggac tcgtcccgca caccgcgcag caccacccgc agcaccagca
     6961 gcgcggctgc gtcgccggcc atcaaaacgg ctacgcgcac tgctgacctg acgaggtgaa
     7021 cgcgcatgat ctgctgagcg cgctgagaga gggcgagtcg ttcgagcgcg gtccccgcca
     7081 cgggtgggtg aggcggtgcc gtggtcccca gggccgggga ggaagtcgcg ccggaaaggg
     7141 gggctgagac gggagctatg gtggaggagg ccgccggaac gtcaacggct ggctgaggct
     7201 ttggcttgga actaatcgag gggcttaccg cagacatgag gtgagttcca cttgcacagg
     7261 gggagtgcgt gatccctcaa caattcgtag cccggacgcg gtcagtacca aaactacttg
     7321 atagagtgcc cgcaagtgcc agcctgccag caagacttac gccaaacggt gccaactctt
     7381 gcactgcctt ctaggacctc ctgctcaggc gcgaacttag ccaaatcaat gtccggcgca
     7441 atcctagcct actatgtgtg catgtgaaca gtttcacaag tgggggccag gacggtcagc
     7501 gctgcggggt gccagccgtc gacgtgtcac agcgacacga acgacactgg ccactgtccg
     7561 gcgagcccgt tgtgtcacaa ggcccctgcc cgcatgagat catgcagatg cacgaagccg
     7621 atgacccgcc cttcgtcttc gagcaccggc agcgccatga ccctatgacg ctccataatg
     7681 ccaacggcga cggcggcgag ttggtcgggt tgggcggtcc gtgccgtccg cgtcatcacg
     7741 tcggcgactg gaacggctaa gaaatgttct tcgcgctcca tgagtcgggt gagatcgccc
     7801 gatgtcacca ccccgaggag gcaagagcgc tcattgacaa cggcgaccgt tcctcgcttt
     7861 tccgccagta gcaccacgca ttcccgcatc tttgccgttg gcggcagtat cggaatgcct
     7921 tccgtcacca tgacatcgcg cactcggagg agccgctggc cgagtctgcc cccggggtgc
     7981 aggcgagcga agtcctcctc ccgaaaaccg cgctgcacca gcagcgagac ggccagcgca
     8041 tcgccgagag ccgccgccgc agtcgttgag gtggttggcg cgagattgta ggggcaggct
     8101 tcctcctcaa cgctacaatc gagaacgatt ttggcctgcc gcccgagcgt cgagtcgaga
     8161 ctccccgtca ggccgatgac agtcacgccg aagcgaccca ggcattcaag caggccgagg
     8221 agctctgcgg actcaccgct cttcgagagt aaaagggcga cgtcggcctt tccaacgatg
     8281 ccgagatcgc catggagagc atccatggcg tgaaggaaaa tggcaggggt ccctgtcgac
     8341 gtgagggtcg ccgcaatctt gcgcccgatg atgcctgatt tccccacgcc cgagacgatt
     8401 acccggcccg atgcgttcag gatggcctca actgcctgca cgaacggatg acccagccgg
     8461 ctttccagcg ccgcaaccgc cgcagcttcc aggcggagga ctcgacgagc ggtctcgagg
     8521 atcttgtctg cgggtggcac cagtttagta ctccagcggc aacgccaccc gtcgcccatc
     8581 gcgggcggac tgatacgtgg cgatcaggat ctccagcgag tgcagccctt cacgtccatc
     8641 cgtgtcgggc accgcctcac cacgcagcga ttgaatcacg ttgtcgtagt aggcggggtg
     8701 accaaacccg tacacggaag cggtctcata gctcgcttgc tgggctttct ggtcgtccgg
     8761 gtcggaatcg gcaaactccc agtggtcgat ccggttcacc gcgaccccgc cgacccgcac
     8821 tgtccccttc tcgccaatga tggtgatgga cccctcgagg tttttggggt acgtcagcat
     8881 ggtgacattc atcgagccca gcgcgccggt ccgccagcgg atgctgacca ccccggtatc
     8941 ttctacctgg atgtcccttt ccagcgtggc agtataggcc tggacactct ccaccggccc
     9001 aatgagccag tcgagcaggt ccacgtagtg gctcgcctga ttcatgaacg cgccgccgtc
     9061 gaactcccag gtcccccgcc agggggcgct gtcgtagtag gactgcggcc ggctccagaa
     9121 aacgttgatg ttgaccatgt aaatccggcc gaagcgcccc ttctgtaccg cgcgcttgag
     9181 gagttgcagc gtggcattcc ggcgattctg cttgacgacg aacaggtgaa cgccggcgtt
     9241 atcgcaggca tgaaccatgc gcttgccgtc ccgccagcgc gtagccatgg gcttttccgt
     9301 catcacgtgt cgccccgccg ccgcaacctg tatcgcttgc tcggcatgga ggccgctggg
     9361 cgtcgccagg atgacgacat cggcatcggt ccctgccagc agggcatcaa gcgagcggaa
     9421 tgccggcgcc ccggtgcgct cgacggcctg ggccagggcg gccggatcca cgtcgcagac
     9481 gccgaccaac tcggcccgct cggcgtgctt ctcgatggca tcgaagtggt tcgcggagat
     9541 acggccgcag ccgaccagcg cgaagcggat gcgccggtcg gtgacgaagg gcttggtgat
     9601 gaacatccct ggggtctcca cgatggccgg gaagtatagc aggagccaag cctgcaaggc
     9661 attgcgtgtt gtgctgctcc cgaaccgcgt ccggtctggc gcgatcaggg accgatcgtt
     9721 atcatgtgaa tagtttcaca aagcccgcgc cgcattatcc tgaggagact ttcgatggca
     9781 accgcgaccc ctcccgtgtc cgccaaggcc gtctaccccg cagaggccgt tgccaagctg
     9841 attgcaccgc ccgaacccga ggaaccggca gacaagcttc gccggctgct gcaggaggcc
     9901 cggaccagga agtcatatct ccacaccgcc ggtgcgtatg acgccttcac cgcggccatc
     9961 atgacccggc tcggcttcaa ggcgctgtac gggagcggct ggcagctcgc ggccaccaag
    10021 agcatgttcc ccgacatcgg agtctatgcc tctcacgaca tggtaaagct ggtgcacgag
    10081 atgtggctgg ggatcgaggg cgcccggaat acccatttct acgaaaccga ggggaaggaa
    10141 gtgctccagg caccacccgc gttcgtcgat atggaggcgg gcttcggcgg tccgacccag
    10201 accttcaccc tggcggtgga gctgatccgg gcccgcgccg ccggcgttca cctggaaaac
    10261 caggacccgg ccaaccgcac ctgtggtcac atcgtgaacg tcggcaagca gaagcgcaac
    10321 aaggtcctgg tcccgcgcaa ggactggctg gccaagctca aggcgatcaa ggccgcctca
    10381 caagccaccg gtgtcgaggt ggtgatcatc gcgcggaccg actcgatcga cggcgccttg
    10441 cccgaccgcg agccgggcgg cgtgaagacg gcggtggaag acgcgtggga ggccgcggag
    10501 ctcggcgtgg acgtgatctg gcccgagttc aacaacaccg agttggagca accgcaggag
    10561 ttcgcggaag gtgtgcgcaa gtattacccc gaccagatgc tcgggttcaa cctgtcgccc
    10621 tcactctact tcggtaaagc gaagaaggcc ggcacgctga tcaccaatca gcagctcgcc
    10681 gacctgggct tcgtcctcca gttctcgacc ttgttcaatt tccgcacggc gggcatggca
    10741 ctggagaagg gtctgcggaa gt
//
LOCUS       DASYRV010000207         3482 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_288196, whole genome shotgun sequence.
ACCESSION   DASYRV010000207 DASYRV010000000
VERSION     DASYRV010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3482
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_288196"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..303
                     /locus_tag="VGQ24_05345"
     CDS             <1..303
                     /locus_tag="VGQ24_05345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEV8454291.1"
                     /translation="PNQNGAPLRLIVPWKYGFKGGKSIVKIRFTDKQPMTTWNIAAPD
                     EYGFYANVNPEVDHPRWSQARERRVGEFFKRKTLMFNGYADQVASLYAGMDLRRNF"
     gene            314..961
                     /locus_tag="VGQ24_05350"
     CDS             314..961
                     /locus_tag="VGQ24_05350"
                     /inference="COORDINATES: protein motif:HMM:NF013918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HEV8454292.1"
                     /translation="MTRAALVRRVIKPALYVTAVFPLAWLLFALFSGLVMGDQVKFIQ
                     HVTGDTVLTCLMLTLTITPLRRVTGWNEIIRVRRLIGLTAFWYACLHLTTYVVFDQSL
                     SVSEIMTDIEKHPWVLVGFTGFLCLIPMAITSTNGWVRRLGGKRWQQLHRLVYVAAAA
                     GVLHYFWLVKKDVTYPLTYGAVLLVLLLSRLWSAAERARSRHTPARRDVEAKPAA"
     gene            1198..1551
                     /locus_tag="VGQ24_05355"
     CDS             1198..1551
                     /locus_tag="VGQ24_05355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454293.1"
                     /translation="MLAFLRQSRALALALVLLAPGIAGSAVQWLHTCPADSPSAVTEH
                     QQHDSKPSDSGHAPACHCIGVCHHAGVVSPAKPLTIAFAPDQPDSFVTPPSGVSFLPA
                     GTPSDLLPPATAPPA"
     gene            1659..>3482
                     /locus_tag="VGQ24_05360"
     CDS             1659..>3482
                     /locus_tag="VGQ24_05360"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEV8454294.1"
                     /translation="MTYGQAVQCGVLFVLTTAVVPAPALAQDAQSSIRGVVLSAQGTP
                     LALASVGIAELGRSATSDSLGRFRLEGVRFGSYLVEARAIGFQPAWQSVTVLPGDSAR
                     LEFRLKAAIVTLPDVVVSTSREEQLASSTPLSVGVIREREIRETRGHHPSELVNHIPG
                     VYVSNFGGEGHATAIRQPITTKALYAYLEDGVPIRSTGFFNHNALYEINIPQAGRLEI
                     IKGPGTAVYGSDAVGGVINSFTREPSDQPEAELFLEGGSSRYGRGFGSVSNSFGRSGL
                     RLDANVTRSDGWRDDTPYDRQSGTFRWDYHLNDRARMKTLAAVSHIDQPGDGGSDLTP
                     TDFQTAPFRTYTPIAFRRVWATRLSSELQVRTERSSFRGTLYARYNSMDLLPSWQLSF
                     DPQVWESRNYSIGVLTHWRRTLPQIRTSVSSGVDLEYSPGSRLETEIQPQRAGQVFTA
                     YTTGEVQYDYAVAFWQASPYAQADVSLPGRVQLSAGARYDQLGYDYDNRLSVLETGSH
                     RRPASTGVSFNRLSPKLGATWEIAPNASVFASYRAAFRAPSESQLFRQGSAENTVDLK
                     PVRAGSWEAGFRTAIGGVVTLEATGYSMRLRDDILTFFDPAN"
BASE COUNT          599 a         1135 c         1071 g          677 t
ORIGIN      
        1 cccaaccaga acggcgcgcc gcttcggctc atcgtgccgt ggaagtatgg cttcaagggc
       61 gggaagtcaa tcgtaaagat ccggttcact gacaagcagc ccatgaccac ctggaacatc
      121 gcggctcccg acgagtatgg cttctacgcg aacgtgaacc cggaagtgga tcatccgcga
      181 tggagtcagg cccgcgagcg ccgggtggga gagttcttca agcggaaaac gctgatgttc
      241 aacggctacg ccgaccaggt cgcctcgctc tacgccggca tggacctccg caggaacttc
      301 tgagcctctc atcgtgaccc gcgcggccct ggtgaggcgg gtcatcaagc ccgcactcta
      361 cgtgacggca gtgttcccgc tggcctggct cctctttgcc ctgttcagcg ggctcgtcat
      421 gggtgaccag gtgaagttca tccagcacgt gaccggtgac acggtgctca cctgtctcat
      481 gctcacgctg acgatcactc ccctgcggcg ggttaccggc tggaatgaga tcatccgggt
      541 gcggcggctg atcggcctga cagccttctg gtatgcctgc ctgcacctta cgacctacgt
      601 ggtcttcgat caatccttgt cggtttccga gatcatgacc gacatcgaga agcacccctg
      661 ggtgctcgtt ggattcactg ggtttctctg tctgatcccg atggcgatca cctcgacgaa
      721 cggatgggtc cgtcgcctgg gcggcaagcg atggcagcag ctgcatcggc tggtgtatgt
      781 cgccgctgcc gcaggagtgc tccactactt ctggctcgtc aagaaggacg tcacctatcc
      841 cctcacttac ggtgccgtgc tgctcgtgct gctgctcagt cgcctctggt cggcggccga
      901 gcgggcgcgg tcgcggcata ctcctgcacg tcgggacgtg gaggctaagc ccgctgcgta
      961 gttgagtttt gataagactc accacagagg cagggaggac acagagggat aatctagcca
     1021 tacggctcac gaaatcgcgg gatccgacgc tagagtcttt gactgtgtag ttgcaaccgc
     1081 gatgtcgtga actctatgct taagcgatct ctctgcgtcc tccgtgcctc tgtggtgaac
     1141 tttgtacgcc gatgccggat cctttctctc cggacctccg caccctatct tttgcgcatg
     1201 ctggcgttcc tgcgacagag ccgcgctctg gccctcgccc ttgttctcct cgctcccgga
     1261 attgccggga gcgcagtgca atggctgcac acctgtcccg ctgattcgcc cagcgccgtt
     1321 accgagcatc agcaacacga ctcgaaaccc tccgattcgg gccacgcgcc cgcctgccac
     1381 tgcatcgggg tctgccacca tgctggggtg gtatcgccgg ccaagccgct caccattgcg
     1441 ttcgcacccg atcagcccga tagctttgtc accccgccat ccggggtcag cttcctcccg
     1501 gccggcaccc cgtcggatct ccttccgccc gctaccgccc caccggcctg aagcgccaga
     1561 catcaggcgc gcactctccc aggaccgtta ggcgcattcc gcgccctcgg ctcggacgag
     1621 ttcccgcgta gaagcgggat cagcgatgga gatctaccat gacatacgga caagctgttc
     1681 aatgcggcgt gctgttcgtg ctgaccaccg ctgtcgtacc cgcgcccgcc ctcgcccagg
     1741 atgctcagag cagcattcga ggggtcgtgc tgagcgccca gggaacaccc ctggccctgg
     1801 cctcggtcgg tattgctgag ctgggccgtt ccgcgacctc cgactctctg ggccggttcc
     1861 ggcttgaggg cgtgagattc gggagctacc tagtcgaggc cagagccatc ggcttccagc
     1921 ccgcctggca gtcggtcacg gtcctgcccg gcgattccgc gaggctggag ttccgattga
     1981 aggctgccat cgtcacgttg cccgacgtgg tggtgagcac cagtcgcgaa gaacagctcg
     2041 cctcgtccac gccactgagc gtgggcgtaa ttcgtgagcg ggagatccgg gagacccggg
     2101 ggcaccatcc ctccgagctg gtgaaccata ttcccggcgt ctacgtcagc aactttggag
     2161 gcgagggcca cgccaccgcc attcgccaac cgatcacgac caaagcgctg tacgcctacc
     2221 tggaagacgg agtgcccatc cgttcgaccg ggtttttcaa tcacaacgcg ctctacgaga
     2281 tcaacatccc tcaggccggg cggctggaga taatcaaagg gccggggacc gcggtgtacg
     2341 gcagcgacgc tgtgggtggt gtgatcaact cctttacccg cgagccgtcg gaccagcctg
     2401 aagccgagct gtttcttgag ggtgggagca gtaggtatgg gcgggggttt ggatccgtca
     2461 gcaactcctt cggacggagt gggctgcggc tggatgccaa tgtgacccgg tccgatgggt
     2521 ggcgcgacga tacgccctac gatcgccaga gcggcacttt tcggtgggac tatcatctca
     2581 acgaccgcgc tcgcatgaag accttggcgg cagtctctca tatcgatcag cctggagacg
     2641 gcggcagcga tctcaccccc accgacttcc agaccgcgcc gttccggacc tacacaccga
     2701 ttgcgtttcg ccgggtgtgg gcgactcggc tctcctcgga gctccaggtt cggacggagc
     2761 gatcctcctt ccgggggacg ctatacgcgc ggtacaacag catggatctg cttccctcct
     2821 ggcagttgag cttcgatcct caggtatggg agagccgtaa ctattcgatc ggggttctga
     2881 cccactggcg ccggaccttg ccccagatcc gcaccagtgt cagtagcggt gtagacctgg
     2941 aatacagccc cgggagcagg ctggagaccg agattcagcc tcagcgtgcc gggcaggtat
     3001 tcacggctta cacgaccggc gaggttcagt acgattacgc tgtagcgttc tggcaggcgt
     3061 cgccctacgc ccaggcggac gtgtccttgc caggcagggt gcagctcagt gccggcgctc
     3121 ggtacgacca gctcggctac gattacgaca accggctgag tgttctggag accggctccc
     3181 atcggcggcc cgcgtccacc ggagtcagct tcaaccggtt gagtcccaag ctcggagcca
     3241 cctgggagat cgcgcccaac gcgagcgtct tcgcctccta tcgcgccgcg tttcgggcac
     3301 cttcggagag ccagctcttc cggcagggat ccgcggagaa cacggtggat ctcaagccgg
     3361 tccgcgcggg gagttgggaa gccggtttca gaacggccat cggcggagtg gtgaccctgg
     3421 aggccacggg gtacagcatg cgcctgcggg acgacatcct gacgttcttc gatccggcaa
     3481 ac
//
LOCUS       DASYRV010000208         5454 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1322281, whole genome shotgun sequence.
ACCESSION   DASYRV010000208 DASYRV010000000
VERSION     DASYRV010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5454
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1322281"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..798
                     /locus_tag="VGQ24_05365"
     CDS             <1..798
                     /locus_tag="VGQ24_05365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454295.1"
                     /translation="RAYGWRWTALCVTPVLAVALASLFRIYPLTERLLLFLAPLVAVI
                     AAAGVEYLVTKLPPHRRALGLAIVGCAGLFVALRTDIRNVLRPHSDGAEVRPMLTQYD
                     TSRSPGDPVYLYARGVPIWAYYTTDWSHPDQTRLNSLLSLAQKIGPNSGNNPSRRRPV
                     EHEGFDLVVPAGDHDELVGTPSGVEILYARADRRAPDPGWADNEVARMRAAGGRQIWV
                     VLTHYSTEVEADLEAAIRRAGGTIAEDWREWAARLWQVHFSAPNQPF"
     gene            complement(1020..1814)
                     /locus_tag="VGQ24_05370"
     CDS             complement(1020..1814)
                     /locus_tag="VGQ24_05370"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8454296.1"
                     /translation="MDVIVVVPCYNEAERLPVETFASYLGAHPQVGLVLVNDGSRDNT
                     LAVLSSLAARYPAQVSVLDLQPNGGKAEAVRRGLLSAMERKPAIVGFWDADLATPLDA
                     IDLFEKLLGGRPDIEWVIGARVKLLGRHIERQELRHYLGRVFATAASLVLGIAVYDTQ
                     CGAKLFRVNAALTDSLQRRFGSRWIFDVELIGRFIQRLRAAGVEHPENRIYEYPLLKW
                     IDVRGSKVKPTDFFQAFAELVGIWFRLRRDRRELRGRQVAGVPDSS"
     gene            1861..2904
                     /gene="tdh"
                     /locus_tag="VGQ24_05375"
     CDS             1861..2904
                     /gene="tdh"
                     /locus_tag="VGQ24_05375"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008743 - L-threonine 3-dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006567 - threonine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HEV8454297.1"
                     /translation="MRALVKPGPGPGMELREAPTPGYGPSDVLIRVHAAGVCGTDLHI
                     WEWDAWASNRLRPPVIIGHEFAGRIEKLGLEAEEEGLLEVGDLVTAEGHIVCGHCLQC
                     RTGNSHLCVRTRIIGVDRDGAFADYIAMPASNVMKLEGIPVEIGAIMDPIGNAVHTVL
                     EGGGVPGSTVFVLGCGPIGCFACGVAKAAGASLVIASDLNDMRLELARRMGADVALNP
                     GRDDVLARIQELTAGDGVDLVCEMSGHPAGHSQAFAAARLGGRVNLLGTPSQSTEVNF
                     ARDVIFKGLTLYGVTGRKLYTTWHQMGRFLRNGQLDPRPVVTHRFPLERIADAIAVIK
                     EGKAGKVILEIAS"
     gene            2901..4100
                     /locus_tag="VGQ24_05380"
     CDS             2901..4100
                     /locus_tag="VGQ24_05380"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008890 - glycine C-acetyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HEV8454298.1"
                     /translation="MTSPLETRVVASLEQFRAEGVYKRLNFIETPQGARVKMEGRGDV
                     IILSSNNYLGFSAEPDVIAAGKAALDQYGAGTASVRFICGTFTIHREVEAALARLVGT
                     PASLTFVSCWNANEALPATLLTDQDLVLSDRLNHASIIDAIRLAKAITKCQTGIYEHK
                     DLGDLDAKLAAAKDRQVKLVITDGVFSMEGAIADLPGLLELCRKHGAVLVVDDSHATG
                     VLGPTGRGTAEHYGMLGQVDIITSTLGKALGGAAGGFVAASEAVCDYLTQRSRPQLFS
                     NALPATVAASALASVRFLESHPERVARLRDNARYFRRRLTDLGFKPLAGETPIIPVII
                     GETAAAMRMSELLLDEHVFVTGFGYPVVPQGTARVRCQISAVHSREDLDEALAAFSKV
                     GRSLGLI"
     gene            4403..5101
                     /locus_tag="VGQ24_05385"
     CDS             4403..5101
                     /locus_tag="VGQ24_05385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454299.1"
                     /translation="MRVNFRVLPLAALGLLVQASASQAQSARSASAAVAKVRDDRFKW
                     FFGAEGGALLFETQSQTQSGVPAAGAHLAVISRRAGMMIGVDEAFGSNEPTAFVDPNT
                     GNQVQPVQFDRIRRYGFNLTGYPVRGALEPYLGLGFGLLQVLSPELTGTFTSKEELDL
                     SAQEAHDRAASGFVSFLAGLQFRVGRVAAFGQYQINSSPAAGSLLRGPGHLIMGGIRL
                     SLGSAKEEIRGGGY"
     gene            complement(5082..>5454)
                     /locus_tag="VGQ24_05390"
     CDS             complement(5082..>5454)
                     /locus_tag="VGQ24_05390"
                     /inference="COORDINATES: protein motif:HMM:NF014316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HEV8454300.1"
                     /translation="LYGPPGTWYVYRSYGIHWCANLVCGKPAAGAAVLLRGLTPLEGL
                     ALMRRRRGRPDPELTNGPGKLCQALGITVELDGQLMWRSNFFVTETKAESPGELVTTP
                     RIGITKAVDWPLRYLLSTPRL"
BASE COUNT          914 a         1878 c         1663 g          999 t
ORIGIN      
        1 cgggcgtacg gctggcggtg gaccgccctg tgcgtcactc ccgtcctcgc ggtagccctg
       61 gcttccctgt tccggatcta tcctcttacc gagcgactgt tgctgttcct tgctcctttg
      121 gtcgccgtca tcgctgcagc cggcgtggag tacttggtga cgaagctgcc cccgcaccgg
      181 cgagccctgg gacttgcgat cgtcggctgc gccggactgt tcgtcgcgct gcggaccgac
      241 atccgcaacg tgctccgacc ccacagcgat ggcgcggagg tgagaccgat gctgacgcaa
      301 tatgacacca gccgctcgcc aggagatccg gtttatctct acgctcgcgg cgttccgatc
      361 tgggcctact acaccacgga ctggtctcac cctgaccaaa ctcgactaaa ctctctgctc
      421 tccctggccc agaagatcgg gcctaattcc ggtaataatc cgtcccgcag acggccggtg
      481 gagcatgagg gcttcgatct ggtggtgcct gcgggagatc acgacgagct ggttgggact
      541 ccctcgggtg tcgagatcct gtatgctcga gccgatcgtc gcgctccaga tcccggctgg
      601 gccgacaacg aagtggcccg catgcgcgcg gccggcggcc ggcaaatctg ggttgtgctg
      661 acccactatt cgaccgaagt ggaggcggac ctcgaagcgg ccattcgccg cgccggcggc
      721 acgatcgccg aggactggcg cgagtgggcc gccaggctat ggcaagtgca tttttcggct
      781 ccaaatcagc ctttttagta cccttttgct gccaaatcgc tctcgaaagg cgtcaaatgg
      841 ccccgaatgg cgcctaatgg cacctaaatg gccccaaaga gcccggaatg gcgcctaaag
      901 acaccccaat ggcgcctttg cgcccgttcc ccgctccctc ttccctcttc tctcttccct
      961 cttccctctt ccctcttccc tcttccctct tccctcttcc cctttcctcc ttccgcattt
     1021 cacgacgaat ccggaacccc cgccacctgc cggcccctca gttcgcgccg atcccgccgc
     1081 agccggaacc agatccccac gagctctgcg aacgcctgga aaaaatccgt cggtttgacc
     1141 ttcgaaccgc gaacatcgat ccacttgagc aggggatact cgtagatccg attctccggg
     1201 tgttcgacac cggcagcgcg gagtcgctgt atgaaccgcc cgattagctc gacatcgaag
     1261 atccagcggc tcccgaaccg tcgctgcaag gagtccgtca gagcggcatt cacgcggaac
     1321 agcttggccc cgcattgcgt gtcgtagacg gcgatgccaa gtaccagcga cgcagcggtc
     1381 gcgaacaccc ggcccaggta gtgccggagt tcctgccgct cgatgtgtcg tcccaatagc
     1441 ttgacccgcg cgccgatcac ccattcaatg tcagggcgcc cgccgagcaa cttctcgaat
     1501 aggtcgatcg catccagtgg ggtcgcgaga tcggcgtccc agaatcccac gatcgccggt
     1561 tttcgctcca tcgcgctgag caggcccctc cgcaccgcct cggctttgcc gccgttcggc
     1621 tgcaagtcca gcacggatac ttgagccgga taacgcgcgg cgagactcga caaaaccgcc
     1681 agtgtgttgt ctcggctccc gtcattcacc agcaccaggc cgacctgggg gtgcgccccg
     1741 agatagctcg cgaaggtttc gaccggaagc cgctccgctt cgttgtagca cggcacgacg
     1801 acgatgacat ccatgcttaa gtatattctc cccgccccgc cccctccgcc gaggattttc
     1861 gtgcgtgcat tggtgaaacc cgggcccggc ccggggatgg agctccgcga ggctcccacc
     1921 ccgggctatg ggccgagcga cgtcctgatt cgggtccacg cggccggggt atgcggcacg
     1981 gatctccaca tctgggaatg ggacgcctgg gccagcaacc ggctccgccc ccccgtcatc
     2041 atcggccacg agttcgcggg ccggatcgag aagctcgggt tggaggccga agaggaaggg
     2101 ctcctcgagg tcggggacct ggtcaccgct gagggtcaca tcgtctgcgg ccactgcctg
     2161 caatgccgta ccggcaacag ccatctctgc gtgcgcaccc ggatcatcgg cgtggatcgg
     2221 gatggagcct tcgcggatta catcgccatg cccgcctcga acgtgatgaa gctggaggga
     2281 atccccgtcg aaatcggcgc catcatggac ccgatcggca acgccgtcca caccgtcctc
     2341 gagggcggcg gcgtgccagg gagcaccgtc tttgtgctcg gctgtggccc gattggctgc
     2401 tttgcctgcg gcgtcgccaa agcagccggc gcttcactcg tgatcgctag cgacctgaac
     2461 gatatgcggc tcgagctggc gcgcaggatg ggcgccgacg tggcgctcaa tcctggacgg
     2521 gacgacgtgc tggcccggat tcaggagctc accgccggcg acggcgtgga cctggtttgc
     2581 gagatgagcg gtcaccctgc gggtcattcc caggcgtttg cagccgcccg gctcggcggt
     2641 cgcgtgaatc tgctcgggac gccgagtcag agcaccgaag tcaacttcgc tcgggacgtc
     2701 atcttcaagg gtctcacact ctatggcgtc accgggcgca agctctacac gacctggcac
     2761 cagatgggcc gtttcctgag aaacggccag ctcgaccccc gtccggtcgt cacccaccgc
     2821 tttcccctcg agcggattgc cgatgcgatc gcggtgatca aggagggcaa ggcgggcaag
     2881 gtcattctgg agatcgcctc gtgacctccc ccctcgaaac tcgtgtcgtt gccagcctgg
     2941 aacagttccg tgccgagggc gtctacaagc ggctcaattt catcgagacc ccacaaggcg
     3001 ccagagtaaa gatggagggg cggggcgatg tcatcatcct ctcctccaac aattacctcg
     3061 gattctccgc cgaacccgac gtcatcgcgg cgggcaaggc ggcgctcgat cagtacggcg
     3121 ccggcaccgc ctcggtgcgc ttcatctgcg gcaccttcac catccatcgc gaggtcgagg
     3181 cggcgctggc ccgtctggtg ggaacgcccg cctcgctcac gttcgtgagc tgctggaacg
     3241 ccaacgaggc gctccccgcc accctgctta ccgatcagga cctggtgctg agtgatcggc
     3301 tcaatcatgc ctccatcatc gatgccatcc ggctcgccaa ggccatcacc aagtgccaga
     3361 ccggtatcta cgagcacaag gacctgggtg acctggacgc taagctggcc gcggcgaaag
     3421 accgccaggt caagctggtg atcaccgacg gcgtcttctc gatggaaggg gccatcgccg
     3481 acctgcccgg tctgctcgag ctctgccgca agcatggcgc ggtcctcgtg gtcgacgaca
     3541 gccacgcgac cggcgtgctc ggtcccaccg gccggggcac cgcagagcac tacggaatgc
     3601 ttggccaggt ggacatcatc acgagcacgc tcgggaaggc gctgggcgga gccgccggcg
     3661 gattcgtcgc ggcctccgag gccgtgtgcg actacctcac ccagcggagc cggccccagc
     3721 tcttcagcaa cgccctgccg gcaaccgttg ccgcgagtgc gcttgcgagc gtccgctttc
     3781 tcgagtccca tcccgagcgc gtggcccgcc tgcgcgacaa cgcgcgctac ttccggcgtc
     3841 ggctgaccga cctcggcttc aagccgctgg cgggagagac tccgatcatt ccggtcatta
     3901 tcggcgaaac cgcggcggcc atgcgcatga gcgagctcct gctcgacgag cacgtcttcg
     3961 tcaccggatt cggctacccg gtcgtgccgc agggcaccgc gcgcgtgcgt tgccagatct
     4021 ccgccgtcca cagccgggag gacctcgacg aagccctcgc tgccttctcc aaggtgggcc
     4081 gatccctcgg gctgatttga accacctgcc acctgccacc taccacctac caccttcaac
     4141 gccccccctt gccttttgcc caaagaaggc gattcggcag gagagagctc ggccggcacc
     4201 ctaacagtga tcgggccacg gtgtgccggg ccggctcagg ccatgtcttg tatctccttg
     4261 taagccatag tgatacacaa atcggcccaa gcgaatctcc cgctgcgggt ggcttggagc
     4321 tgccgttcgg tgcacttggg gcgagcgtag catggggttt gccgtcttgc ggaatctcga
     4381 ttctccgtcc ggaggcacgc ccgtgcgcgt caatttccga gttcttccgc tcgcagccct
     4441 gggtctcttg gtccaggcct cggcctcgca agcgcagtcc gctcgctccg caagcgctgc
     4501 ggtcgccaag gtccgtgacg atcgcttcaa gtggttcttc ggagccgagg gcggcgcgct
     4561 gctgttcgag acgcagtcgc agacccagag cggcgttccc gccgctggag ctcatctggc
     4621 ggtgatttcc cgccgggccg gcatgatgat cggcgtggat gaggcgttcg gcagcaacga
     4681 acccacagcc ttcgttgatc ccaacaccgg caatcaggtt cagccggtcc aattcgaccg
     4741 gattcggcgc tatggtttca acctgacggg ctaccccgtg cgcggggctc tggagccgta
     4801 cctgggcctc ggattcggat tgctgcaggt cctgagtccc gagctgaccg gtacctttac
     4861 ctcaaaggaa gagctcgacc tgagcgccca agaggctcac gatcgcgccg caagcggctt
     4921 tgtatccttc ctcgccggcc tgcaattccg ggtcggccga gtcgccgcgt tcggtcagta
     4981 tcagatcaac tcgtcgcccg ccgcgggcag tctgctgcgg ggtcctggtc acctgatcat
     5041 gggtggcatc aggctttcgc tgggcagtgc aaaagaggag atcagaggcg gggggtactg
     5101 agcaggtaac gcagcggcca gtccaccgct ttcgtaatac cgatccgcgg agtcgtcacc
     5161 agttcaccgg gcgactccgc tttcgtttcc gtgacaaaga aattcgaccg ccacatgagc
     5221 tgcccgtcca gctcgaccgt gatgccgagc gcctgacaca gcttaccggg tccattggtc
     5281 agctcaggat cgggtctgcc tcggcggcgg cgcatcagcg ccaggccctc gagcggcgtg
     5341 aggccgcgta acagcaccgc ggctcccgcc gccggcttgc cgcacaccaa gttggcgcac
     5401 cagtgaatgc cgtaggagcg atagacgtac caggtgccag gcgggccgta cagg
//
LOCUS       DASYRV010000209         6736 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3611003, whole genome shotgun sequence.
ACCESSION   DASYRV010000209 DASYRV010000000
VERSION     DASYRV010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6736
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3611003"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1226
                     /locus_tag="VGQ24_05395"
     CDS             <1..1226
                     /locus_tag="VGQ24_05395"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEV8454301.1"
                     /translation="AGARSVRYGSVRSWVEALTVVTADGDVVTLRREKTSPESAALAR
                     FDRDAAPAIAAAAPLIATRFPHTRKNSSGYALDAYLASGDVLDLLIGSEGTLGIVTEI
                     EWRLDTQPAFRAGLRVSLRSLEELGPAVAALRSAEPSAVELLDRTFLDLVGSTTRSEA
                     HLHSSDADALLLVELEQDDDESLTQALERASTAVHPFALSVERGVSDEAADRLWAIRH
                     AASPILSRLPEGQRSLQVIEDGCVPVARMGEYIRAVRRAAAECGIPAVMFGHAGDGHV
                     HVNLLPEVSRPGWEAAIVRVMDAVTETIVRLGGTLSGEHGDGRLRADALARVYGPEIV
                     ELFRRVKRSFDPLGIFNPGIILPSGEPPISRLKVGASAVPLPDDLQRSLREIERTGGY
                     GRSRLELADELGARS"
     gene            1323..2075
                     /gene="thyX"
                     /locus_tag="VGQ24_05400"
     CDS             1323..2075
                     /gene="thyX"
                     /locus_tag="VGQ24_05400"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: protein motif:HMM:TIGR02170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050797 - thymidylate synthase (FAD)
                     activity [Evidence IEA];
                     GO_process: GO:0009265 - 2'-deoxyribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HEV8454302.1"
                     /translation="MEIIRSPRVTLIARPQFLEPAHLPVQWKGESTDGERLAEFAGRL
                     CYMSQHNPAGRSTEDYLRNILRQGHGSVFEHSTYVMLIEGISRSCSHELVRHRAGWGF
                     SQLSQRYVDESHAAFVMPPAIMGDPILETEWTNQVEAAQTAYAGAVEGLMSRYEWVED
                     KIHRRKLAREAARSVLPNATEVKIVASANVRAWRTMLELRLGEGAELEIRRMAVACLR
                     VLQQEAPALFADFEIYQSPEGGEAGRVGFHKV"
     gene            2321..3424
                     /locus_tag="VGQ24_05405"
     CDS             2321..3424
                     /locus_tag="VGQ24_05405"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454303.1"
                     /translation="MAVRIGLAFNLKPAAPANPAGAISESPPSDEPPSRAFRPDLHQP
                     DLYAEWDEPATIDAVARALSTVGQVHRLEADSRFPARLALLRPDFVFNIAEGLYGASR
                     EAHVPAICEFLGVPCHASDPLTLGLALHKGRAKEILSYRGVPTAPFTVAHSAADARRV
                     KLPYPLFVKPAFEGSGKGITTRSLCRNRSQLVQQVSHLLATYSEPVLIEAYLPGQEFT
                     VAILGNGDEARCLPIIGMRFDMLPKGAPPIYGYEAKWIWDTPSNPLEIYECPANISKR
                     LAAEIREAALGAYHALECRDWCRVDVRCDAAGRPMVVELNPLPGILPDPRDHSCFPKA
                     AAAAGMSYDELIRAVADVAWRRISGRSLLAEVA"
     gene            3424..4434
                     /locus_tag="VGQ24_05410"
     CDS             3424..4434
                     /locus_tag="VGQ24_05410"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454304.1"
                     /translation="MKVAILFDAGSEEWTPQDVAAVVANVHEVRDVLRRRGHEVELLP
                     VRYGDFRWLSRVRRADLVFNLCEGINGHARFEDLVVGTLELTGVPFTGCRTWPTTVCH
                     RKHVANTLLSSAGIPVPAFTLAQANKTPAEFPLPAIVKPAAEDASVGIDNGAVCTSKR
                     ALKRRVAQMLEQFEEVLVQEYVAGREFNVGFVGKRMLPIAEIRFEDLPQGTWPIVSYA
                     AKWIPGSPEDEGTVPVCPADLPPELLQCISQVARKAWEQMSDGEGYGRVDMRLSEDGQ
                     PYVLEVNPTPDLSSNAGLARMGRAFGWSYDDLVMQIVDEALMRSQSHRAATALVSGVS
                     AA"
     gene            4431..4934
                     /locus_tag="VGQ24_05415"
     CDS             4431..4934
                     /locus_tag="VGQ24_05415"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEV8454305.1"
                     /translation="MSGTLLSSRLRHLSAADRGRIEDITRAVGLFREDEIPVALEVFD
                     EAVREGGSQSYTAIGSDVDDRLVGWICWGPTPCTLGTYDLYWMAVEPALQGGGIGSAL
                     LSEMERRLAGLARLVIIETTGRSDYAATRGFYEARGYRAAATIPDFYAPGDDQVVYVK
                     SFSEGEQ"
     gene            5088..6212
                     /locus_tag="VGQ24_05420"
     CDS             5088..6212
                     /locus_tag="VGQ24_05420"
                     /inference="COORDINATES: protein motif:HMM:TIGR00238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KamA family radical SAM protein"
                     /protein_id="HEV8454306.1"
                     /translation="METWQEVLRKNSIASLDALAAKFGPENFPDLERLRQAAENFEFR
                     ISSAMVDLIKSPDDPIWRQYVPSVEELDVVDGIVDSLNEDADSPVPNITHRYPDRALF
                     LVSPVCATYCRFCTRRRKVGDPEKIPMSQFESAFRYLEEHTEIRDVIMSGGDPLLLND
                     RRLEAILTRLRAIPHLQIIRIGSRIPCHLPERITPELCATLKRFHPLFINTHFNHPDE
                     LTPAAVAALGMLADAGIPLGCQTVLLKGVNDTPAVMMELMQRLLMARVRPYYIYMADQ
                     VAGAEHFRTSVQTGIEIMRALRGWTSGLAVPYFVIDAPGGGGKIPILPEYVESMTEDE
                     VVLKNFRGERYVYRQPREEVGVIALKKKRKVARSPRRRTA"
     gene            complement(6363..>6736)
                     /locus_tag="VGQ24_05425"
     CDS             complement(6363..>6736)
                     /locus_tag="VGQ24_05425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454307.1"
                     /translation="AKGRFDTYIGAYLDEPTPRGLVDQWTRAGWGALNYGHYANPVFD
                     SLLSAASREPDVGKAKQRWREAMDTLNADAPAIFLYALANTAAVQRRLEDVELDPYSW
                     LSGLPTWRVDRERRLGRDSVQ"
BASE COUNT         1137 a         2220 c         2180 g         1199 t
ORIGIN      
        1 cggccggggc aagatcggtg cgttacggca gcgtgcgctc ctgggtcgaa gccctcacgg
       61 tcgtcaccgc cgatggcgac gtggtgaccc tccggcgcga gaagaccagc cccgagtccg
      121 ctgcgctggc gcggttcgac cgggatgccg cgccggcgat tgccgcggct gccccgctga
      181 tcgcgacgag gtttccccac acccggaaga actcctcggg atacgcgctc gacgcgtatc
      241 tggcctccgg tgatgtcctg gatctgctca tcggcagcga gggcaccctc ggcatcgtga
      301 ccgagatcga gtggcggctc gacacccagc cggccttccg ggcggggctt cgggtatcgc
      361 tccgttccct cgaagagctc ggccctgctg tcgcggctct gcgctccgcc gagccttcgg
      421 ccgttgagct gctggaccga acctttctcg atctcgtcgg gtccaccaca cgctccgagg
      481 cacacctcca cagctccgac gccgatgcgc tgctgctggt tgagctggag caggacgacg
      541 acgaatccct gacccaggcc ctcgagcggg ccagcactgc cgtccacccg ttcgccctct
      601 cggttgaacg gggagtctcc gacgaagccg cggaccggct ctgggccatc cgccacgcgg
      661 ccagccccat cctgtcgagg ttacccgagg ggcaacgctc gttgcaggtt atcgaggacg
      721 ggtgcgtgcc ggttgctcgc atgggcgagt acatccgggc ggtgcgccgc gccgcggccg
      781 agtgcggcat tcccgccgtg atgttcgggc acgcgggcga tgggcacgtc cacgtcaacc
      841 tccttcccga ggtgagtcgt ccgggatggg aagccgcaat cgtgcgggtg atggatgccg
      901 tcaccgagac aatcgttcgt ctcggcggga ccctgtccgg cgagcacggg gacggccgcc
      961 tgcgggcgga tgccctggct cgagtctacg ggccggagat cgtcgagctg tttcggcggg
     1021 tcaaacgaag cttcgatcct ctgggaatat tcaacccggg cattatcctt ccgtccggcg
     1081 agccgccgat cagccgcctc aaggttgggg cgagtgcggt gcccctgccg gacgacctgc
     1141 agcgttcgct gcgcgaaatc gagcggaccg gtgggtatgg gaggagtagg ttggaattgg
     1201 cggatgagct aggagctcgg agctaggagc taggacgcct acttagaatt tcaatacctg
     1261 gaggtataac tttgcacccg acgacgcagc tcccgactcc tagctcccga cgcctagctc
     1321 ccatggaaat catccgctca ccccgcgtca ccctcatcgc ccggccccag tttctagagc
     1381 ccgcgcatct cccggtgcag tggaagggcg aatcgaccga tggcgagcgg ctcgccgagt
     1441 ttgccggacg gctctgctat atgagccagc acaatccggc gggccggagc accgaggact
     1501 acctgcggaa cattctgcgg caggggcacg gctcggtctt cgagcactcc acctatgtga
     1561 tgctcatcga gggaatctcg cgctcctgca gccatgagct ggtgcggcac cgggcgggct
     1621 ggggcttttc acagctctcg cagcgctacg tggacgagtc ccacgccgcc ttcgtgatgc
     1681 cgcccgcgat catgggggac ccgatactcg aaacggagtg gaccaaccag gtcgaggctg
     1741 ctcagactgc ctatgccggg gccgtcgagg ggctgatgtc ccgctacgag tgggtcgagg
     1801 acaagattca ccggcggaag ctggcccgcg aggcggcgcg gagtgtcctc cccaatgcga
     1861 ccgaggtgaa gatcgtggcg agcgcgaacg tccgcgcctg gcgaacgatg ctcgagctca
     1921 ggctgggcga gggtgccgag ctggagatcc gccggatggc ggtggcctgc ctccgtgtgc
     1981 ttcagcaaga ggcgccggcg ctcttcgcgg acttcgagat ctatcagtcg cccgagggtg
     2041 gcgaggcggg acgcgtggga tttcataagg tctagtcgct agtcgttagt ctctagtcct
     2101 tagctcggag gcagccaccc actagagctg aagaccagag actagagacc aaagactagg
     2161 gaccagcgac taacgactag cgactcctcc aaaaactcat ctcgactttc ttccaaaaaa
     2221 ctattgtgcc accaaatgat tttccttacc ttagttgcgt cgacatgtga actcgtcctg
     2281 gctcgtctct cgcggacggc cttttttgta gagggcgcct ttggcagttc ggatcggact
     2341 cgcctttaat ctcaaaccag cggcgccggc taacccagcc ggggcgatct ccgaatcccc
     2401 tccttccgac gaacctccga gtcgggcgtt ccgccccgac ctccatcaac ccgacctgta
     2461 cgctgagtgg gatgagcccg caaccatcga tgcggtggcg cgggcactca gcaccgtggg
     2521 gcaggttcat cgcctcgagg ccgacagcag attcccggcc cggctggcgc tgctccggcc
     2581 ggatttcgtc ttcaacatcg ccgaagggct ctacggagcc agccgggaag cgcatgtccc
     2641 tgcgatctgc gagttcctcg gcgtaccctg ccacgcgtcc gatccactca cgcttggcct
     2701 cgcgctgcac aagggccggg ccaaggagat cctctcctat cgcggtgtgc cgacggcgcc
     2761 cttcaccgtc gcgcactcgg cggcggatgc ccggcgggtc aagctcccct atcccctctt
     2821 tgtgaagccc gcgttcgagg gctcggggaa ggggatcacc acccggagtc tctgccggaa
     2881 ccgctcgcag ctcgtgcaac aggtctccca tcttctcgcg acctactcgg agccggtgct
     2941 gatcgaggcc tatctgccgg gccaggaatt caccgtcgcc atcctcggca acggtgacga
     3001 ggctcgctgc ctgcccatta tcggcatgcg atttgatatg ctgccgaagg gtgcgccacc
     3061 catctacggg tacgaggcca agtggatctg ggacacgccg agcaatccgc tcgagatcta
     3121 cgagtgcccg gccaacatct cgaagcggct cgcggcggaa atacgggagg ccgcgctggg
     3181 agcctatcac gccttggaat gccgcgactg gtgccgcgtc gacgtccgct gtgacgccgc
     3241 cggtcgcccg atggtcgtcg agctcaatcc gctgccgggc attttgcccg acccgcggga
     3301 ccattcgtgt tttcccaagg ccgcggctgc ggccgggatg agctacgacg aactcatccg
     3361 cgccgtcgcc gacgtggcct ggcggcggat cagcggccgt tcactcctgg cggaggtagc
     3421 ctgatgaaag tcgccattct cttcgatgcg ggcagcgaag agtggactcc ccaggacgtg
     3481 gctgcggtgg tggccaacgt ccacgaagtc cgagacgtgt tgcggcgccg ggggcacgag
     3541 gtcgagctcc tgcccgtccg gtacggcgac ttccgctggc tctcccgggt tcgccgggcc
     3601 gatctcgtct tcaatctgtg cgaggggatc aacggccacg cccgcttcga agacctggtg
     3661 gtgggcaccc tcgagctcac cggcgtgccg ttcaccggct gccggacctg gcccacgact
     3721 gtttgccatc ggaagcacgt ggccaacacc ctcctttcat ccgccggtat cccggtcccg
     3781 gccttcaccc tggcccaggc caacaagact ccggccgagt tcccgctgcc agccatcgtg
     3841 aagccggccg ccgaagacgc cagcgtcggc atcgacaacg gcgcggtctg caccagcaag
     3901 cgggcgctca agcggcgcgt ggcccagatg ctggagcagt tcgaggaggt tctggtgcag
     3961 gagtatgtgg ccggccggga gttcaacgtg gggttcgtcg gcaagcggat gctcccgatc
     4021 gcggagatcc ggttcgagga ccttccccag ggtacctggc cgatcgtgag ctatgcagcc
     4081 aaatggatcc ccggcagccc ggaggacgag gggacggtgc cggtctgtcc ggcggacttg
     4141 ccgcccgagt tgctccagtg catcagccag gtggcccgaa aggcctggga gcagatgtcc
     4201 gacggcgagg ggtacggtcg cgtcgacatg cgcttgagcg aggacggcca accgtacgtc
     4261 ctcgaggtca atcccacccc cgatctctcg agcaacgccg gcctcgcccg catgggtcga
     4321 gcgttcggct ggagctacga cgatctcgtc atgcagatcg tggacgaggc tctcatgcgc
     4381 tcgcagagcc atcgggccgc caccgccctc gtcagcgggg tgtcagccgc gtgagcggca
     4441 ccttgctctc ctctcgtctc cgccacctca gcgcagccga tcggggccgc atcgaggaca
     4501 tcactcgtgc ggtgggcctc tttcgtgagg acgagatccc ggtggcgctc gaggttttcg
     4561 atgaggcggt ccgggaaggc ggcagccagt cctacaccgc catagggtcc gacgtggacg
     4621 accggctggt cggctggatc tgctggggcc ccactccctg caccctcggc acctacgatc
     4681 tctactggat ggcggtggag cctgcactcc agggtggcgg aataggctcc gcgcttctca
     4741 gcgaaatgga gcgccgcctt gccgggctcg cccggctggt cattatcgag accacggggc
     4801 ggtcggatta cgccgccacc cgcggcttct atgaagcccg gggttaccgg gcggccgcca
     4861 ccatccctga cttctatgcc ccgggcgacg atcaggtcgt ctatgtcaaa tccttcagtg
     4921 agggtgagca gtgagaggta aggggtgagg gggtgagggg tgaggggtta cgggtgagac
     4981 gtaagaggtg agcagtaaac ggtaagaagt aaccggtgag aagtgaggtg agaagtacag
     5041 tcccctctca cctcttacct ctcacctctt accattccgg aggcgtcatg gagacttggc
     5101 aggaagtcct gagaaagaac tcgatcgcat cgctcgacgc tctagccgcc aagttcggtc
     5161 cggagaactt tccggacctg gaacggctca ggcaggcagc cgaaaacttc gagttccgta
     5221 tctcgtcggc catggttgac ctcatcaagt ctcccgacga tccgatctgg cgccagtacg
     5281 tgccatcggt cgaggagctc gatgtggtgg acggcatcgt ggactcgctc aacgaggacg
     5341 ctgacagccc ggtgccaaac atcacccacc ggtatcccga ccgggccctg tttctggtat
     5401 caccggtctg cgctacgtac tgccgcttct gcacccggcg gcgcaaggtc ggtgaccccg
     5461 agaaaatccc gatgtcccag ttcgagagtg cctttcgcta tctcgaggag cacaccgaga
     5521 tccgggacgt catcatgtcc ggcggcgatc ctctgctgct gaatgaccga cgcctcgagg
     5581 ccatcctgac ccgcctgcgc gccatcccac atctccagat catccggatc ggcagccgga
     5641 tcccgtgcca cctgcccgag cggattacgc cagagctgtg cgccaccctg aagcggtttc
     5701 atccgctctt catcaatacc cacttcaatc atccggatga gctgacgccc gcggccgtgg
     5761 ccgccctcgg catgcttgcc gacgcgggga ttccgctggg ctgccagacg gtgcttctca
     5821 agggagtgaa cgacacgccg gccgtcatga tggagctcat gcagcggctg ctcatggcgc
     5881 gggtccgccc ctactacatc tacatggcgg accaggtggc cggcgcggag cacttccgca
     5941 cctcggtgca gacggggatc gagatcatgc gggcgctgcg cggctggacc agcgggttgg
     6001 ccgtgcctta tttcgtgatc gatgcccccg gtggcggcgg gaagatcccg atcctgccgg
     6061 aatacgtgga aagcatgacc gaagacgagg tggtgctgaa gaacttccgg ggggagcgct
     6121 atgtgtaccg gcagccgcgg gaggaagtgg gcgtcatcgc cctcaagaag aagcggaagg
     6181 tggcgagatc cccaaggcgc agaaccgcct aagcgggatc tggtagatct gagagatgtc
     6241 attctgagcc cagcgaagaa tctctctggt agctgaggga tcccttcgcg atgctcaggg
     6301 caggctcttc gcttcgctca ggatgacagt tcagccacct ggctccagct cctagctcct
     6361 agctactgca ccgaatcccg ccccaacctc cgctcccgat ccacccgcca tgtcggtagc
     6421 ccgctgagcc aggagtacgg gtccagctcg acgtcctcca gtctccgctg cacggccgcg
     6481 gtgttggcca gggcgtagag aaagatcgca ggcgcgtcgg cgttgagggt gtccatcgcc
     6541 tcccgccacc gctgcttggc cttgccgaca tcgggttcgc gggacgcggc ggagagcagc
     6601 gagtcgaaga ccggattggc gtagtgcccg tagttcagcg caccccaacc ggcccgtgtc
     6661 cattgatcca ccagacccct cggggttggc tcgtccaggt acgccccgat gtaggtatcg
     6721 aaccgcccct ttgcca
//
LOCUS       DASYRV010000210         3245 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2534705, whole genome shotgun sequence.
ACCESSION   DASYRV010000210 DASYRV010000000
VERSION     DASYRV010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3245
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2534705"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..822
                     /locus_tag="VGQ24_05430"
     CDS             <1..822
                     /locus_tag="VGQ24_05430"
                     /inference="COORDINATES: protein motif:HMM:NF012640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HEV8454308.1"
                     /translation="AFQDGVRRIKEYIAAGDTFQTVLSRRLDLAAPDPFLTYRYLRAL
                     NPAPYLYYLHCDDMYIIGSSPEILVRVEEAEVTVRPIAGTRPRGLTIEEDTALGAELT
                     ADPKERAEHLMLVDLGRNDVGRVAEFGTVRLTAFMTIERYSHVMHLVSEVRGRLRPGL
                     DAIAALAACFPAGTVSGAPKVRAMEIIDELEPTRRGPYAGAVGYVGWGARTLDTAIAI
                     RTCVMKGGRAWIQAGAGIVADSDPAAEWRETEAKARAVLLALALAGRRGGGAAGQ"
     gene            898..2532
                     /locus_tag="VGQ24_05435"
     CDS             898..2532
                     /locus_tag="VGQ24_05435"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEV8454309.1"
                     /translation="MPYRLVSFSGDQSFELPHGRSLVVGRGVTSDIAIYDPTISRRHA
                     ELTVETDGVQVKDLGSSNGTCINGTRVTAGRLSPNDSVTFGKVLFQLEELKPGGRRSG
                     GGPVLPANSVHSDTIIRQLMVSGGGPPGITSRNRSSGFGQLRVAAESAEERQAKKLSL
                     LLDISQKLSGEFDLDRLLRNVVDMMFEVMNVDRVSILLRDESTRELVPSMSRSRLGDA
                     EFQSVPRSIADKVIEERVAVVSDNTRTDSRFKGHSIVAQSVRCAMCSPLMASGDQILG
                     LLYVDSVTAANSFSDEDLQFLVAFSGLAAIGIRNSRYADQVRREALVRSNFERYFAPN
                     VAAEIAQQDAAVPLGGDRRPVTILFSDIRGFTSMAESMGPDAIAQLLTEYFSEMVEII
                     FEHGGTLDKFVGDAIMALWGAPIAHADDPDRALRAAVEMQRGIARLNERWVRAGRPEI
                     GVGIGINHGDVFAGNIGSHRRLEYTVIGDAVNVAHRLCSQAGPGEILVSEAVCQVVKD
                     PADYEYLPAASLRGRTRSVQVYRVKGVASRESRAGS"
     gene            complement(2583..3155)
                     /locus_tag="VGQ24_05440"
     CDS             complement(2583..3155)
                     /locus_tag="VGQ24_05440"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HEV8454310.1"
                     /translation="MSMALLTLASSSPRRKQLLEMLGIPVRVVPSNVPEVRRSLETPM
                     DYVERLAREKALSVPGELVLGADTTVVVRDAVLEKPTDAADALRMLQRLQGRTHQVVT
                     SIALVANEVVHQATDITNVTFRRVDADFLEAYVATGEPMDKAGAYGIQGYGAALVERI
                     EGDFFSVMGLPVRLVLNLMREAGREYRFGK"
BASE COUNT          546 a         1065 c         1074 g          560 t
ORIGIN      
        1 gcattccagg atggagtccg gcggatcaag gagtacatcg cggccgggga caccttccag
       61 acggttctct ctcggcggtt ggacctggcc gcgcctgacc cattcctgac ctaccgctat
      121 ctgcgggcat tgaacccggc accgtacctg tactacctgc actgcgatga catgtacatc
      181 atcggcagct cgcccgagat tctggttcgg gtagaggagg cggaggtcac cgtgcgcccc
      241 atcgccggca cccgcccacg cgggctcacg atcgaggagg acaccgcgct cggcgccgag
      301 ctgaccgctg acccgaagga gcgggccgaa cacctcatgc tggtggatct cggcaggaac
      361 gatgtgggac gggtggcgga gttcggcacc gtgcggctca cagcgttcat gacgatcgag
      421 cgctattccc acgtgatgca cctggtgagt gaggtccggg gccggctccg ccctggtctc
      481 gatgccatcg cggcgctggc agcctgcttc cccgctggca cggtgtcggg cgccccaaag
      541 gtgcgggcga tggagatcat cgacgagctg gagcccactc ggcggggacc gtacgccggg
      601 gcggtcggtt atgtcgggtg gggggctcga accctggata cggcgatcgc gatccgcacc
      661 tgcgtgatga agggcggccg cgcctggatc caggcgggag ccgggattgt cgccgattcg
      721 gaccccgcag cggagtggcg ggagaccgaa gccaaggcgc gggcggtctt gctggcgctc
      781 gctttagcgg ggcggcgggg cggcggggcg gcggggcagt aactcaagca gatcccccgt
      841 tcttaccggc ctgctgcccc cctgccccgc tttcccgctt ccccgcatct ttccaccatg
      901 ccctaccgcc tcgtgagctt ctccggcgat cagagcttcg agctgccgca tggccgcagt
      961 ctcgtggtcg gccggggagt caccagcgac atcgccatct acgacccgac catatcccgc
     1021 cggcacgccg agctcaccgt cgagactgac ggggtccagg tcaaggacct gggcagctcc
     1081 aacggcacct gcatcaatgg cacccgggtc acggcgggac ggctgagccc gaacgattcc
     1141 gtcaccttcg gcaaggtgct cttccagctg gaagagttaa agcccggggg ccgaaggtcg
     1201 ggaggggggc ccgtgctccc ggccaactcg gtccacagcg acaccatcat ccgtcagctc
     1261 atggtaagcg gcggcgggcc tcccgggatc accagccgga accgcagttc cggattcggc
     1321 cagcttcggg tagcggccga atcggcagag gagcgtcagg ccaagaagct ctcgttgctg
     1381 ctggatatct cccagaagct ttcgggcgaa ttcgatctcg ataggctgct ccgcaatgtc
     1441 gtggacatga tgttcgaggt catgaacgtg gatcgggtgt ccattcttct gcgcgacgag
     1501 agcactcggg agctggtccc ctcgatgtcg cggagtcgcc tcggcgacgc cgagtttcag
     1561 agtgtgcccc gctcgattgc cgacaaggtg attgaggagc gggtagcggt cgtctccgac
     1621 aacacccgaa ccgacagccg cttcaagggc cactcgatcg tggcccagag cgttcggtgc
     1681 gcgatgtgct ccccccttat ggcctcgggc gaccagatcc tcggtctgct gtacgtggac
     1741 agcgtgaccg ccgccaactc cttcagcgac gaagatcttc aatttctggt cgcgttcagc
     1801 gggctggcgg ccatcggaat ccggaacagc cgctacgccg accaggtgcg gcgtgaggcg
     1861 ctggtccggt ccaacttcga gcgctacttc gcgccaaacg tcgcggccga gatcgcgcag
     1921 caggacgccg ccgtgccgtt gggcggggac cggcggccgg tcaccatcct gttcagtgac
     1981 atccggggct ttacctcaat ggccgagtca atgggacccg acgccatcgc gcagctcctg
     2041 accgagtact tcagcgagat ggtcgagatc atctttgagc acggcggaac gctggacaag
     2101 ttcgtcggcg atgccatcat ggcgctgtgg ggtgccccca tcgcgcatgc ggacgatccc
     2161 gaccgcgcgc tccgcgccgc ggtggagatg cagcgcggca ttgcccggct caacgagcgg
     2221 tgggtcaggg ccggtcggcc cgagatcggg gtgggcatcg ggatcaacca tggcgacgtg
     2281 ttcgcgggca acatcgggag ccatcggaga ctggagtaca ccgtgatcgg cgatgcggtc
     2341 aacgtcgccc accggctctg ctcccaggcc gggccgggag agatcctggt aagcgaggcg
     2401 gtgtgtcagg tggtgaagga ccccgcggac tacgagtatt tgcctgcggc ctcactgcgg
     2461 ggaaggacga ggtcggtgca ggtctataga gtcaaaggag tcgcgagtcg cgagtcgcga
     2521 gccggcagct aggtcgcccg attatcggct cctcatcgtg actcgtgact cgtgacttgc
     2581 gactacttcc caaaccgata ttctcgcccc gcctctctca tcaggttcag gactagccgc
     2641 acgggaagtc ccatcacgct gaagaaatct ccctcgatcc gctccaccag cgccgcgccg
     2701 tacccctgaa tcccatacgc cccggctttg tccatcggct cgccggttgc gacgtaggcc
     2761 tcgagaaaat cagcgtccac ccgccggaac gtcacgttcg ttatatcggt ggcctgatgt
     2821 actacttcgt tggccacgag tgcgatagag gtcacgacct ggtgggtgcg gccctgaagc
     2881 cgctgcagca tgcgcagcgc atcggccgca tcggttggct tctccagcac cgcatcgcgc
     2941 acgacgaccg tcgtgtcggc accgagcacc agctcaccgg gaacactgag cgccttttcc
     3001 cgggcgagcc gctcgacata gtccatcggc gtctccagcg agcgccgcac ctcgggcacg
     3061 ttggagggaa ccacccgaac cggaatcccc agcatctcca gcagctgctt gcgtctcggc
     3121 gagctcgatg cgagggtgag cagcgccatg ctcatggtgc gcggtccagg atgagggtca
     3181 caggcccgtc gttgtgaatc tcgaccagca tgtcggctcc gaattctccc gcggcgacgg
     3241 tcagc
//
LOCUS       DASYRV010000211         2151 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2745582, whole genome shotgun sequence.
ACCESSION   DASYRV010000211 DASYRV010000000
VERSION     DASYRV010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2151
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2745582"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..795)
                     /locus_tag="VGQ24_05445"
     CDS             complement(<1..795)
                     /locus_tag="VGQ24_05445"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEV8454311.1"
                     /translation="MTTSTAEPLVSVVLPCLNEEAAIGSCIEKIQSTFAKAGIAGEIV
                     VCDNGSSDRSVPIAEGLGARVVHQPVRGYGNAYLKGFASARGRYLIMGDADDTYDFTL
                     IPTFLDLLTSQGYDFVTGSRYLNGGHRHITPLHRIFGNPALTAILNILFGTRYTDVYC
                     GFRGFSRRAYDVIRPVSPGMEFNLELAINAGFAGLRIQEIPIQLAPRKGESKLRTFRD
                     GWRSLRMMLLYSPNMVFLLPGALFLVLGLVIHLAVLLGAVRWDGRPA"
     gene            complement(792..1610)
                     /locus_tag="VGQ24_05450"
     CDS             complement(792..1610)
                     /locus_tag="VGQ24_05450"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEV8454312.1"
                     /translation="MPFSTAIPASFPKSSDRAIEAAVELRGVSKRFYYYEHRTSSLRE
                     WFIRRVLQRPLNIRRAEFTLRSFDFRVARGEAVALIGSNGSGKSTALRLIAGIYRPSS
                     GTIRTWGRLTAVIELGAGFHPELTGADNVALYAAVLGLERRELMARYDEVVDFAQMRE
                     FMDTPLKYYSSGMEARLAFSVAVCLQPDVLLLDEVLAVGDQAFRDRCLARLRAYHSRG
                     GTLILVSHEVDQVRELCSRAVWLERGVMRMDGDVDWVLAAYRAGDSLDRSRGAR"
     gene            complement(1564..>2151)
                     /locus_tag="VGQ24_05455"
     CDS             complement(1564..>2151)
                     /locus_tag="VGQ24_05455"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8454313.1"
                     /translation="AFVLSGYFVWNCILQTLNTGTYIFAEHSRLTRSVAFPSEILVLS
                     AVGSRLLEFVAEIALILVLLVAFHHHFVPASFALLPILLVIQVLLVIGLALPIATLSV
                     FYYDVQHALPIALTTLFYLSPVFYPAQMVPEAARPFYFLNPIAGLLTLYHEILYAGRI
                     PSFTLLSGMIVAAFLVYLIGYAIFNRYSSVFSEIV"
BASE COUNT          452 a          660 c          718 g          321 t
ORIGIN      
        1 cgccggccgc ccatcccacc gcaccgcgcc gagcagcacg gccaggtgaa tgacgagtcc
       61 gagcaccaga aagagcgcgc caggcagcag aaagaccatg ttgggtgagt acagcaacat
      121 catgcgcagg ctgcgccatc catcgcggaa tgtgcgcagc ttcgactccc ccttgcgtgg
      181 ggccagctgg atcgggattt cctggattcg caacccggca aagccggcat tgatggccag
      241 ctcgaggttg aactccatgc cggggctcac cgggcggatg acgtcataag cccgtcggct
      301 gaaccctcgg aacccgcagt acacgtcggt gtacctggtg ccgaagagga tattgaggat
      361 ggcggtgagc gccgggttcc cgaagatgcg atggagcggg gtgatgtggc ggtgcccgcc
      421 gttgagatag cggcttccgg ttacgaaatc gtacccctgg ctggtgagca gatcgaggaa
      481 tgtggggatg agggtgaaat cgtaggtgtc gtccgcatca cccatgatca ggtagcgccc
      541 gcgcgcgctg gcgaatccct tgaggtaggc gttgccgtag ccgcgcacgg gctggtgtac
      601 cacccgggcc ccgagcccct cggcgatcgg aacggagcgg tcgctggacc cgttgtcaca
      661 gaccacgatc tcccccgcga taccggcctt cgcgaaggtg ctctggatct tctcgatgca
      721 gctgccaatc gccgcttcct cgttgaggca cggaaggacg acggaaacca agggctccgc
      781 ggtggatgtg gtcaccttgc tcctctgctt cggtcaagtg aatcgccggc ccggtacgct
      841 gcgagcaccc agtccacgtc gccgtccatc cgcatcaccc cccgctcgag ccagacggcc
      901 ctggagcaga gctcacgtac ctggtccact tcatgggaga cgaggatcag ggtgccaccg
      961 cgggagtggt aggcgcggag ccgggccagg cagcggtccc gaaaggcctg atcaccgacc
     1021 gcgagcacct cgtcgaggag caggacgtcc ggctggagac acacggcgac cgaaaaggcg
     1081 agccgcgcct ccatgccgga ggagtagtac ttgagcgggg tgtccatgaa ctcccgcatc
     1141 tgcgcgaagt ccacgacctc gtcataccgg gccatcagct cccgccgctc caaccccagg
     1201 accgctgcat agagcgccac gttgtcggcg ccggtgagct cggggtggaa tcccgctccc
     1261 agctcgatga ccgcggtgag acgcccccag gtccggatcg tgccgctgga aggacgatag
     1321 atgccggcga tcaggcgaag cgccgtgctc ttaccggagc cgttggagcc gatcagcgcc
     1381 actgcctcgc cgcgcgccac ccgaaaatcg aaactgcgga gcgtaaactc ggcgcgccgt
     1441 atgttgagcg gccgctgcag gacccggcgg atgaaccact cccggaggct gctggtgcgg
     1501 tgctcgtaat agtagaaccg cttcgagacc ccccgaagct caaccgcggc ctcgatggcg
     1561 cggtcagacg atttcggaaa agacgctgga atagcggttg aaaatggcat agccgatcag
     1621 gtagaccagg aacgccgcga cgatcatccc ggagagcagg gtgaaagacg gaatccggcc
     1681 ggcgtagaga atctcgtgat acagcgtgag caggcccgca atcgggttca ggaagtagaa
     1741 cggccgggcc gcttccggca ccatctgggc cggatagaaa acaggggaga ggtaaaacaa
     1801 ggtagtcagg gcgatcggca gcgcgtgctg tacgtcgtaa tagaagaccg acaaagtggc
     1861 gatcgggagc gccaacccga tcaccaggag gacctggatg accagcagga tcgggaggag
     1921 cgcaaagctg gccggcacaa aatgatggtg gaaggcgacc agcagtacga gaatgagcgc
     1981 gatctcagcc acgaattcca gcaggcgcga gcccaccgcg ctcaacacca ggatctcgct
     2041 ggggaaggcg acgctgcggg tgagccgcga gtgctcggcg aagatgtacg tcccggtatt
     2101 aagcgtctgg aggatacagt tccacacgaa atagccgctc agcacgaatg c
//
LOCUS       DASYRV010000212         5499 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3158660, whole genome shotgun sequence.
ACCESSION   DASYRV010000212 DASYRV010000000
VERSION     DASYRV010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5499
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3158660"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1099
                     /locus_tag="VGQ24_05460"
     CDS             <1..1099
                     /locus_tag="VGQ24_05460"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEV8454314.1"
                     /translation="DAERMFVSVFGSDLETDGVESGLYLPLKDEEGVLGVLVFEAGTP
                     EFASETQLEVAAILANQTAVALRNAQLYHQVPMVDALEALAAKKRAVLALPRRRVQIY
                     AGVAVLVLAALALIRWPFRVVGEAASFRPTALAPVRALVPGVVERMLVQEGNAVQRGM
                     PLASLRSTNLSSDRTSTAAEASSADRSAALAASRGDAAEERLQRIRGDALRQELALLD
                     EQLGYTTVRAPVTGVVLTPHVNEKVGASLDEGDLLLTIGRTDTLELEFGVDQRDIGRV
                     QRGQAVHLRVDALPQRTFVGRVTSIAQLPADSGAVVHYPVRASVANPNGVLKPQMAAY
                     ARVLTAPASAMDRLLRAPARWTRLLWWKIWG"
     gene            1096..2079
                     /locus_tag="VGQ24_05465"
     CDS             1096..2079
                     /locus_tag="VGQ24_05465"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEV8454315.1"
                     /translation="MKLALLLILTAACSRQPATRAATHPTESGSLGAASASTIATADT
                     ATVQVPLALPSQLYVEHDATIYARSAGIVEAVLVDLGAQVAAGQPLARLESADQRIAL
                     DQAQQKFDNTLQWVERQRALKTAGVVTQADSEQVEFEHREAMLGLRKAQRDYDLTRIV
                     APFTGVVTGRTARIGRLVGSGDSLFRLTALRPILAAVRVPEASAAGIAVGTEAEVVGL
                     GGATSRAKVIRASPIVDAGSGTREMILQLITAGGPRLTPGTSVTVRLGSQRRQVVAIP
                     RTAVADDGYALVWADDRTTLRPLTLGSELEGDRIEVLSGLAPGEKVVRTAP"
     gene            2076..4124
                     /locus_tag="VGQ24_05470"
     CDS             2076..4124
                     /locus_tag="VGQ24_05470"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEV8454316.1"
                     /translation="MTARPKLRRDLVLVEQTYRGEQSYIIKDPESRKYFRFRPVEVMV
                     MQALDGEHTAEEAAAALAEEGLRVSTKGVEAFANKLTAMGLCERTLSERSVLLMERLR
                     AQRRRRLGKGIFQGDILRLRWSVGDPDKLFDRLLPRLRFFFSRTFLITSVVLFGMYFL
                     VLGVKWPEFSRAVADMYTFKLTLGTLAVFWLTGTVIIAIHELGHGFTCKYFGGQVHEI
                     GAMLIYFEPAFFCNVNDAWTFPELRARLWVTAAGSWIQMVVASIGAIVWWAAAPGTLI
                     SEVALAAVLIGGIITVFMNVNPLIPLDGYYALSDYLEVPNLRQRASAHLAWLVKTRVL
                     RLDLPQPPADTREQRIFLVYGGLAFLYIALILAFCAATAFGWLNRWLGFLGLLIFAVG
                     MWLALRKQIKAWAQAIALSFRKHGKIWHGPLRSRLIGAAATIVVLGFIVPWPITISGP
                     LVVAPALAIPLTAPDSGIVEQVRVREGSRVPAGAPLLHIRNLELEREMVSHQRVADSL
                     AVRSSQARARNQAAEMSLLDAARSVEEARLDGIRTRLAELGIRALSNGVVVTPRPEEL
                     AGRWVSNGEVVLQLGQPDSVEVRIVLAGAGATLVKGGQPVRLLSSATLERPLRTRLSA
                     VSVAANSPDGLEARVRLPADDSWRPGMTGEASITLRRSNVWGALWWSVRRGIRSDLLL
                     "
     gene            4237..5055
                     /locus_tag="VGQ24_05475"
     CDS             4237..5055
                     /locus_tag="VGQ24_05475"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEV8454317.1"
                     /translation="MRQAFTGRYEVEREIGRGGNARIFLARDSNGQAVALKILHPELL
                     VSVAADRFLREIKLASRLNHPHIARLLDSGEQEWLVYYVMSYAEGLTLRERLDASCQL
                     SIPETLRLAGDLLDALDHAHSQGIIHRDVKPANVVLSSEGAILLDFGIARAVVASGTD
                     QLTRSGIAVGTSTYMSPEQITALADIDHRSDIYSMGCMLFECLAGQPPFHHRNEAVVL
                     QLHLTQTAPDVRTLRSDTPAELATGISKALAKAPKDRWRSAAEMRDAFAAVAVS"
     gene            5140..>5499
                     /locus_tag="VGQ24_05480"
     CDS             5140..>5499
                     /locus_tag="VGQ24_05480"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEV8454318.1"
                     /translation="MIDPLESLRAALEGRYAVERLIGQGGMATVYLARDVRHDRPVAI
                     KVLRPELAASLGSDRFLREIKLAAHLQHPNILALYDSGEANGFLYYVMPFVEGESLRA
                     RLDREAQLSLPDAVQLTC"
BASE COUNT          867 a         1850 c         1833 g          949 t
ORIGIN      
        1 ggatgccgag cggatgttcg tcagcgtttt cggctccgac ctggagaccg acggagtaga
       61 aagcgggctg tacctcccac tcaaggacga agagggagtg ctcggcgtgc tggtcttcga
      121 ggccggcacc cctgaattcg ctagcgaaac gcagctcgag gtggctgcta tcctggccaa
      181 ccaaaccgcg gtcgccctga ggaacgccca gctctaccac caggtaccca tggtagacgc
      241 gctggaggcg ctggcggcaa agaaacgggc cgttctggcg ctcccccggc ggagagtgca
      301 gatctacgct ggtgtggcgg tcctggtgct ggccgcgctg gcgttgattc ggtggccgtt
      361 ccgggtagtg ggtgaagcgg catcgttccg gcctaccgcc ctggcccccg tgagggcgct
      421 cgtgcccggc gtggtggaac ggatgctggt gcaggaaggg aacgcagtcc agcggggaat
      481 gccgctggcg tccctccgat ctaccaatct ctcgagcgac cggacgtcca ccgcggcaga
      541 ggcgagctcc gcagaccgct ccgccgccct ggcggcgagc cgtggcgacg cagcggaaga
      601 gcggctccag cgaatccggg gcgacgcctt gcggcaggag ctggcgttgc tggacgagca
      661 gctcggctac accacggtcc gggccccagt gaccggtgtc gtgctgacac cccatgtaaa
      721 cgagaaggtc ggcgcgtccc tcgatgaggg cgatctgcta ctcaccatcg ggcggaccga
      781 cacgctcgag ctcgagttcg gagtggacca gcgagacatc ggccgggttc agcgagggca
      841 ggcggtgcac ctccgggtcg atgccctgcc ccagcgcacc tttgtgggcc gggtgacctc
      901 gatcgctcag ctcccggccg acagcggagc ggtggttcac tacccggtca gagcgtcggt
      961 ggccaacccg aatggcgttc tcaaacccca gatggcggcg tatgcccggg tcctcaccgc
     1021 gccggcgagc gcgatggatc ggttgctacg ggccccggcg cgatggacga ggctgctatg
     1081 gtggaaaata tggggatgaa gctcgcgctt ctgttgatcc tgaccgcggc ctgtagcaga
     1141 cagccggcca cgcgggccgc cacgcaccca accgagagcg gttccctcgg agccgcctcc
     1201 gcgtccacca tcgccacggc cgatacggcc acggtgcagg tcccgcttgc gctcccctcc
     1261 cagctctacg tcgagcacga cgccacgatc tacgcccgat cggccggcat cgtcgaagcg
     1321 gtgctggtgg acctgggcgc ccaggtggca gccgggcagc cgctggcccg gctggagagc
     1381 gccgaccagc ggatcgcact cgatcaagcg cagcagaagt tcgacaacac cctacagtgg
     1441 gtggagcggc agcgggcgct caagaccgcg ggggtcgtca cccaggccga ctcggagcag
     1501 gtcgagttcg agcaccggga agcgatgctt ggactgcgga aggcgcaacg ggattacgac
     1561 ctcacccgga tcgtcgctcc ctttacgggc gtggtaaccg gccggactgc acgaatcggc
     1621 cgcctggtcg gatcgggaga ctcgctcttc cggctcaccg ccttgcggcc gatcctggcc
     1681 gccgtgcgtg tacccgaggc atcggcggcg ggtattgccg tggggaccga agcggaggtc
     1741 gtcgggctcg gcggcgccac ctcccgggct aaagtgatcc gtgcgtcccc catcgtcgat
     1801 gcgggcagcg ggacccggga gatgattctc cagctcatca ccgccggcgg ccctcggctc
     1861 acgcccggta cgagtgtcac cgtccggctg gggtcacagc gccgccaggt cgtcgccatt
     1921 ccacgcacag cggtagcgga cgacgggtac gccctggtgt gggccgacga ccgaaccacg
     1981 cttcgacccc tcacgctggg cagcgagctc gaaggcgacc ggatcgaggt gctgagcgga
     2041 ctagcgcccg gcgagaaggt cgtccggacc gctccgtgac tgcccgtccc aagctccgcc
     2101 gcgacctcgt cctggtggag cagacctatc ggggcgaaca gagctacatc atcaaggacc
     2161 ccgaatcccg caaatacttc cggtttcgtc ccgtcgaagt gatggtcatg caggccctcg
     2221 atggcgagca caccgcggaa gaggctgcgg ccgcccttgc cgaggaaggg ctccgggtct
     2281 ccaccaaggg agtggaggcg ttcgccaaca agctgacggc catgggcctg tgcgagcgca
     2341 ccctgagcga gcgctctgtg ctcctgatgg aacggctccg ggcccagcgc cgccggcggc
     2401 tcggcaaggg gatattccag ggtgatatcc tgcgactgcg ctggtcggta ggcgaccccg
     2461 acaagctgtt cgatcgcctg ctgccccggc ttcgtttctt cttctcccgc acctttctca
     2521 tcacatcagt cgtgctattc ggaatgtatt tcctggtgct cggggttaag tggccggagt
     2581 tttccagggc cgttgccgac atgtacacct tcaagctcac cctcggcact ctggcggtct
     2641 tctggctgac cggcacggtc atcatcgcca ttcacgagct gggtcacggt ttcacctgca
     2701 agtacttcgg ggggcaggtc cacgagatcg gcgcgatgct catctacttc gagccggcct
     2761 tcttctgcaa cgtgaacgac gcctggacct ttcccgagct ccgggcgcgt ttatgggtga
     2821 cggcggccgg ctcctggatt cagatggtcg tcgccagcat cggcgccata gtctggtggg
     2881 ccgctgcgcc gggaacgctg atctccgagg tggcgctcgc ggccgtcctc atcggcggga
     2941 tcattacggt cttcatgaac gtgaacccgc tcattccact ggacggctat tacgcgctca
     3001 gcgactacct cgaggtcccg aacctccgcc agcgagcctc ggcgcatctc gcctggctgg
     3061 tgaagacccg agtcctccgg ctcgatctgc cgcagccccc ggcggacacg agggagcaac
     3121 ggattttcct cgtctacggc gggctggcat tcctctacat cgcgctcatc ctggcatttt
     3181 gtgccgccac cgccttcggc tggcttaatc gctggttggg ctttctcggg ctgttgatct
     3241 tcgcggtggg catgtggttg gcactccgca aacaaatcaa ggcatgggcg caggccatcg
     3301 cgctctcgtt tcgaaagcac gggaagatct ggcacggtcc gctgcggtcc cggctgatcg
     3361 gcgccgccgc gacgatcgtg gtgctggggt ttatcgtccc ctggccaatc acgatctcgg
     3421 ggccgctggt ggtcgccccc gcgctggcta tcccgctgac cgcgccggac agcgggatcg
     3481 tagagcaggt ccgggtgcgg gaggggagcc gagtgccggc tggtgctcca ctgctccaca
     3541 tccgtaacct cgagctcgag cgcgagatgg tctcgcatca gcgggtcgcc gactcgctgg
     3601 cggtacggtc gtctcaggcc cgggcccgga accaagccgc cgagatgagc ttgctcgacg
     3661 cggcgcggtc ggtggaagaa gccaggctcg acggcattcg aacccggttg gcggagctgg
     3721 ggatccgggc gctgagcaac ggggtagtgg tgaccccacg gcccgaggag ttggccggcc
     3781 gctgggtctc gaacggtgag gtcgtgctcc aattggggca gcccgactcg gtcgaggtcc
     3841 gcatcgtact cgccggcgcc ggcgccacgc tcgtcaaagg agggcaaccg gtccgtctgt
     3901 tgtccagcgc cacgctggaa cggccgttgc ggacccgcct ttcggcggtt tcggtcgcgg
     3961 ccaactcgcc ggacggcctg gaggccaggg ttcgtctgcc cgccgacgat tcctggcgcc
     4021 cggggatgac cggcgaggcg agcatcaccc tccgccgctc caacgtctgg ggagccctgt
     4081 ggtggagtgt ccggcgaggg atccggagcg acctcctcct ctagcgggat ttcggagctt
     4141 gcgcctgagg gtgcaagacg caaccattga gatgccccta catagttacc cctacaagca
     4201 taggagcagc ccatccggcg cgacatgttg gcgttggtgc gccaggcttt caccgggcgc
     4261 tatgaggtgg agcgggagat cggccggggc ggcaatgccc ggatctttct cgcgagggac
     4321 tcgaatggcc aggcggtcgc gctcaagatc ctccatcccg aactgctggt cagcgttgcc
     4381 gccgaccgct ttcttcggga gatcaagctc gcctcccgac tgaaccaccc gcacatcgcg
     4441 cggctactcg attccggcga gcaggagtgg ctggtctact acgtcatgag ctatgcggag
     4501 gggctgaccc tccgggaacg cctcgacgca tcgtgccagc tctccattcc cgaaacgctg
     4561 cggctggcgg gtgacctgct cgatgccctg gatcatgctc atagccaggg gatcatccac
     4621 cgagacgtga agccggcaaa tgtggtgctg tcttccgaag gcgccatcct gctcgacttc
     4681 gggatcgctc gcgcggtggt cgcctccggt accgaccagc tcacccgatc gggaatcgcg
     4741 gtgggcacat ccacctacat gagcccggag caaatcaccg cgttggccga catcgaccac
     4801 cggtccgaca tctattcgat gggctgcatg ctgttcgagt gcctggccgg ccagcccccg
     4861 ttccatcacc gcaacgaggc ggtggtgctg cagctccacc tgacccagac ggctccggac
     4921 gtccgcaccc tccgcagcga tactccggcg gagcttgcca ccgggatctc caaggccttg
     4981 gccaaggcgc cgaaggaccg ctggcgctcc gccgccgaga tgcgggatgc cttcgccgca
     5041 gtcgcggtct catagcccga ccgggatact ggcccgctgg ccgaggtcca gtacctcgcc
     5101 ctatcttggt aaggtctttc ccgccgctga ggcaccccag tgatcgatcc actcgaatcc
     5161 ttacgtgccg cactcgaggg gcgctatgct gtcgagcggc tgatcggcca agggggcatg
     5221 gccacggtgt atctggcgcg cgacgtcagg cacgaccggc cagtcgccat caaggtcctc
     5281 cgccccgagc tcgccgcgtc cttagggtct gaccggttcc tccgggagat caagctcgcc
     5341 gcccacctgc agcaccccaa catcctggcg ctgtacgact ccggtgaggc caacggcttt
     5401 ctctactacg tcatgccgtt tgtcgagggc gagtcgctgc gggcccggct cgaccgggaa
     5461 gcgcagcttt ccctgcccga tgctgtccag ctgacctgc
//
LOCUS       DASYRV010000213         5644 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2158166, whole genome shotgun sequence.
ACCESSION   DASYRV010000213 DASYRV010000000
VERSION     DASYRV010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5644
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2158166"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..692)
                     /locus_tag="VGQ24_05485"
     CDS             complement(<1..692)
                     /locus_tag="VGQ24_05485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HEV8454319.1"
                     /translation="MPKTDLMPPDESADAAFLDRLRAATELLESIVSDRSLLAPVPST
                     ERQRLLQAAGHVYAPDPVARRQLVRAGIRRRKAEEVRREDQALNRTGIRTLRRQAVFT
                     SPNVFPPAGFEQREVDGDPDFREAVEPQHCYVCKEHYTLLHHFYDQLCPPCAAFNFAK
                     RTELADLGGRVALLTGGRVKIGYQAGIKLLRAGAHLIVTTRFPRDSAARYAAEPDFGE
                     WGHRLEIFGLDLR"
     gene            complement(732..1217)
                     /locus_tag="VGQ24_05490"
     CDS             complement(732..1217)
                     /locus_tag="VGQ24_05490"
                     /inference="COORDINATES: protein motif:HMM:NF017936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEV8454320.1"
                     /translation="MIDRAAALIATLGLSPHPEGGYYGELYRSSATVHPDDGRGPRSA
                     ITTIYFLLPHGSVSRWHRVQSDEVWHFYEGEPLDLWMAPPEGGQVDHYRLGPLDEAQR
                     PVWTVPAGHWQAARSTGGYTLVGCTVGPGFDFHDFALTDKQSGIDSVIRARYPALAEL
                     L"
     gene            complement(1214..1708)
                     /locus_tag="VGQ24_05495"
     CDS             complement(1214..1708)
                     /locus_tag="VGQ24_05495"
                     /inference="COORDINATES: protein motif:HMM:NF001095.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HEV8454321.1"
                     /translation="MVPVAAGSEHAGSRLRIWIDADAAPRDVKDLVYRAAKRLEIATV
                     LVANQRLHAPVGNPYVTAIWVDGGADIADRYIADHAEPGDLVVTQDIPLAALLVPRKV
                     FVLDPRGDEHTAETIGERLSVRDFMDRLRTAGGVTDGPSAYDARARQAFAAALDRVLT
                     RARK"
     gene            complement(1663..1881)
                     /locus_tag="VGQ24_05500"
     CDS             complement(1663..1881)
                     /locus_tag="VGQ24_05500"
                     /inference="COORDINATES: protein motif:HMM:NF021552.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2277 domain-containing protein"
                     /protein_id="HEV8454322.1"
                     /translation="MCRNIKRLRRPHEEPTEQELHDAALQFVRKISGFNAPSRANEPA
                     FNDAVQEVAAAGGRLFRSLRVRSTQAVV"
     gene            2027..2698
                     /locus_tag="VGQ24_05505"
     CDS             2027..2698
                     /locus_tag="VGQ24_05505"
                     /inference="COORDINATES: protein motif:HMM:NF015658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF305 domain-containing protein"
                     /protein_id="HEV8454323.1"
                     /translation="MTRTRMQQVFTALAAVALAACSRANQAAVRTSPEPAGASVTAQV
                     RADSLRHPYTQADVDFMSHMIGHHAQALVMSGWAPTHGASPSVRTLAERIINAQQDEI
                     ASMQRWLRDRGKTVPEASPTGMKMTMNGAEHEMLMPGMLTEAQMRQLDQASGPEFDRL
                     FLTYMIQHHRGAVSMVKDLFGTNGAAQDETVFKFANDVNVDQSTEIARMERMLAALPP
                     LERSP"
     gene            2779..4782
                     /locus_tag="VGQ24_05510"
     CDS             2779..4782
                     /locus_tag="VGQ24_05510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454324.1"
                     /translation="MASAKLPSLPLAIGLLSAAACAHSISSSRANGPSPADSMSTTAP
                     NPDPRVGLRAGKMDAAEAVWNLRVLSKTPPSKQFVDITNSDLAFTGHYAIQGSYGGYQ
                     VWDISNPRRPSLKTGYVCPASQSDVSVYKNLLFVSGENLSARLDCGTQGIEDTVSSER
                     LRGIRIFDISSIGHPRNVGNVQTCRGSHTHSLLVDPRDPENVYVYISGSSRVRSPNEL
                     PGCVSAMPSKDPNTAWFRIEVIKVPLAHPEQAAIVSSPRIFNNLVAPPRHGEVPEDSV
                     ARAKELAEAKAAGEFTEIVPGRGESVIPPERSRMLLDSIVKARNGAGDPTAADSASLR
                     RVIPAMVAARTGAHPDSGSGPTQCHDITLYPAIGLGGGACEGYGLLLDIRDPAHPVRI
                     AAVSDSNFSYWHSATFNNDGNKILFSDEWGGGSQPKCRKTDKPEWGADAIFTIARQKM
                     QFQSYYKLPAPQTPEENCVAHNGSLIPIPGRDVMAQAWYQGGVSVFDWTDPAHPKEIA
                     FFDRGPVDSTEMASGGYWSVYWYNGVLVGSEISRGLDIFELKPSGFISQNEIDAAKSV
                     HLDYFNTQGQVKLVWPATFSLARAYVDQLERSNGLDAGKITAVREALAREEKASGTKR
                     QDALTQLATRLDGDAAGAGDSAKVRTLASVVRQLATAPRLARQ"
     gene            complement(4793..5134)
                     /locus_tag="VGQ24_05515"
     CDS             complement(4793..5134)
                     /locus_tag="VGQ24_05515"
                     /inference="COORDINATES: protein motif:HMM:NF022164.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaF N-terminal domain-containing protein"
                     /protein_id="HEV8454325.1"
                     /translation="MTDVPRAAAIRGKTIRLTWVEGPTKGKTHEHVFHDDGTVEWRDA
                     ASPQKDAPAKEKPEYAAIRVADDIYAVSYLAPSGYTLTVVLNFREQKVIGFASSSKDW
                     HPVQGTFQVVK"
     gene            complement(5179..5586)
                     /locus_tag="VGQ24_05520"
     CDS             complement(5179..5586)
                     /locus_tag="VGQ24_05520"
                     /inference="COORDINATES: protein motif:HMM:NF021612.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase-like protein"
                     /protein_id="HEV8454326.1"
                     /translation="MPTNLFGLVVGIAIGLLVAWVYVLLWKARYTATIREDAVQRSQA
                     VTAGKVHEQLIPYLPAFPYNPKDVRFLGSPIDLVVFDGLAEGRIRRIVFLEVKTGRSG
                     LTSRERCVRDVIQARDVEWVELRVARPFASGAA"
BASE COUNT         1005 a         1887 c         1806 g          946 t
ORIGIN      
        1 cgcagatcga gcccgaagat ctcgaggcgg tgtccccatt cgccgaaatc tggctccgcg
       61 gcatatcggg cggcggaatc gcgcgggaaa cgggtggtga cgatgaggtg agctccggcc
      121 cggagcagct tgatcccggc ctggtaaccg atcttcaccc gcccgccggt caagagtgcc
      181 acccgcccgc ccaagtcggc cagttcggta cgcttggcga agttgaacgc cgcgcatggc
      241 gggcacagct ggtcgtaaaa gtggtggagg agggtgtagt gctccttgca cacgtaacag
      301 tgctgcggct cgaccgcctc ccggaagtcg ggatcaccat ccacctcgcg ctgctcgaac
      361 cctgcgggcg ggaagacatt cggactggtg aacaccgctt gccggcgcag cgtccggatt
      421 ccggtccggt tgagcgcctg gtcctcccgc ctcacctcct ccgctttgcg gcggcggatg
      481 ccggctcgca ccagctgccg gcgagccaca gggtcgggag cgtacacgtg tccggccgcc
      541 tgcagcagcc gctggcgctc agtggagggt accggggcca ggaggctccg gtcggagacg
      601 atcgattcca gcagctcggt ggcggcgcgg agccggtcga gaaacgcggc atccgcgctc
      661 tcgtccggcg gcatgaggtc tgttttcggc atggcgcgaa gtctaatgcg atgccaggcc
      721 ctctcaagct gctataagag ctcggcgagt gccgggtagc gggcgcgaat caccgagtct
      781 atccccgact gtttatccgt aagggcgaag tcgtgaaagt cgaaccccgg ccccaccgta
      841 cagcccacca gggtgtagcc tcccgtcgag cgtgccgcct gccagtggcc ggcgggcacc
      901 gtccagaccg ggcgctgtgc ctcatcgagg ggccccaacc ggtaatggtc cacctggccg
      961 ccttccggcg gcgccatcca gagatcgagt ggctcgccct catagaagtg ccagacctcg
     1021 tccgactgga cccgatgcca gcggctcacc gacccgtgcg gcaggaggaa gtaaatagtc
     1081 gtgatggctg aacgaggccc gcgaccatcg tccgggtgga cggtggcact ggagcgatac
     1141 agctcgccat agtagccgcc ctccgggtgc gggctcagcc cgagcgttgc gatgagcgct
     1201 gcggcgcgat cgatcacttg cgggcacggg tcaggacccg atcaagcgcg gcagcgaagg
     1261 cctgcctggc ccgcgcatca taggccgatg gaccatcggt cactcctccc gcggtgcgta
     1321 agcggtccat gaagtcccgg accgagaggc gctccccgat ggtttcggcc gtatgctcat
     1381 cgccgcgagg gtccaacacg aagaccttcc tgggcaccag cagggcagca agtggaatat
     1441 cctgggttac caccaggtct cccggttccg cgtgatcggc gatataccgg tcggcgatgt
     1501 ctgcgccccc atcgacccag atggccgtga cgtacggatt gccgaccggg gcgtgcaggc
     1561 gctgattcgc cacgaggact gtcgcgatct ccagccgctt cgcggcgcgg tatacgagat
     1621 ccttgacgtc ccggggcgca gcgtccgcgt cgatccagat cctcagacga ctgcctgcgt
     1681 gctccgaacc cgcagcgacc ggaacaatcg cccgcctgct gcggcaacct cctggaccgc
     1741 gtcgttgaac gccggctcgt tggccctcga cggagcgttg aacccactga tcttccggac
     1801 gaactgcagg gccgcgtcgt gcagctcctg ctcggtgggc tcctcgtgcg gccgtcgcaa
     1861 ccgcttgatg ttccggcaca ttgctgcgat tcctcctccc tgatctcacg ctgatacccg
     1921 atccagccgg cgcttccgat ccatccggcg gcgggacaat ttatccttac aggctggtaa
     1981 tttaggcgga tcggccccgg ccgcatcccg ggacaggatt ggaaaaatga cccgaacacg
     2041 catgcaacag gtcttcaccg ccctagcagc ggtcgccctg gcggcctgca gccgtgccaa
     2101 tcaggcggcc gtgcggactt cgcctgagcc ggccggtgcc tccgtcacgg cccaagtcag
     2161 ggctgacagc ctccgccatc cctataccca ggcggacgtg gacttcatgt cccacatgat
     2221 tggccaccac gcgcaggcgc tcgtcatgtc cggttgggcg cccacgcatg gggccagccc
     2281 ctcggtgcgt accctggccg agcggatcat caatgcccag caggacgaga tcgcgtcgat
     2341 gcaacgctgg cttcgggatc gtggtaagac cgtgcccgag gcgagcccca cgggcatgaa
     2401 gatgacgatg aatggtgccg agcatgagat gctgatgccg ggtatgctca ccgaggcgca
     2461 gatgcggcag ctggaccagg cgagtgggcc ggaattcgac cggctgttcc tcacctacat
     2521 gatccagcac caccgcggtg ccgtctcgat ggtgaaggac ctattcggga ccaacggggc
     2581 cgcccaggac gagaccgtgt tcaagttcgc caacgacgtc aacgtcgacc agtcgacgga
     2641 gattgcccgg atggagcgca tgctcgctgc tctcccccca ttggaacgct ctccgtgaaa
     2701 cctctccggt cgttcgtccg tatgcgccac tcggaagaac gctattggag ccaacagccc
     2761 caacgaagga aacccggcat ggcatccgcc aagctcccgt ctctgccact ggccatcgga
     2821 ctcctgtccg ctgccgcgtg tgcccactcg atctcgtcct cgcgggccaa cggcccctcg
     2881 cctgcggaca gtatgtccac cacggcgcca aaccccgatc cgcgcgtcgg tcttcgcgcc
     2941 ggcaagatgg atgcagccga agccgtctgg aacctgcgcg tgctttcgaa gacgccgccg
     3001 tcgaagcagt tcgtcgacat caccaactcc gacctggctt tcaccggcca ctacgccatc
     3061 cagggcagct acggcgggta ccaggtgtgg gacatcagca atccgcgtcg gcccagcctg
     3121 aaaaccggct acgtctgccc ggcatcgcag agtgacgtct cggtctacaa gaacctgctc
     3181 ttcgtctccg gtgagaacct ctcggcgcgc ctcgactgcg gaacccaggg gatagaggac
     3241 acggtcagct cggagcggct gcgcggcatc cggatcttcg acatcagcag catcggccac
     3301 ccgaggaacg tgggcaacgt gcagacctgc cgcggctcgc acacccactc gctgctggtc
     3361 gatccccggg atccggagaa tgtatacgtc tacatctcgg gctcctcccg ggtgcggtcg
     3421 ccgaacgagc tcccgggctg cgtgagcgcg atgccttcca aggatcccaa cacggcctgg
     3481 ttccgcatcg aagtgatcaa ggtcccgctg gcccatcccg agcaggccgc gatcgtgagc
     3541 tcgccccgga tcttcaacaa cctggtggcc ccgccgcgac acggcgaggt gccggaggac
     3601 agcgtcgcac gagcgaagga gttggccgaa gcgaaggcgg cgggcgaatt caccgagatc
     3661 gtgccgggtc gcggggagtc cgtcatccca cccgagcgca gccgcatgct gttggacagc
     3721 atcgtcaagg ctcgaaacgg cgccggcgat ccgacggcgg cggacagcgc ctcgctacgt
     3781 cgggtgattc ccgcaatggt cgccgcgagg acgggtgccc accccgacag tggcagcggg
     3841 cccacccaat gtcacgacat cacgctctac ccggcaatcg ggctcggcgg gggcgcctgc
     3901 gagggctatg ggctcctact cgacatccgg gatccggccc atccggtccg catcgccgcg
     3961 gtgtccgact cgaacttctc ctactggcat tcggccacat tcaacaacga tggcaacaag
     4021 attctcttct ccgacgaatg gggaggcggg agtcagccga agtgccggaa gactgacaag
     4081 ccagaatggg gagcggacgc gatcttcacg atcgcccggc agaagatgca gttccagagc
     4141 tactacaagc tgcccgcgcc gcagacgccg gaggagaact gcgtggccca caacgggtcg
     4201 ttgatcccga tcccggggcg ggacgtgatg gcccaggcgt ggtatcaggg cggtgtctcg
     4261 gtcttcgact ggaccgatcc cgcgcacccg aaggagatcg ccttcttcga tcgtggcccg
     4321 gtggactcga ccgagatggc cagcggcggc tattggtcgg tctactggta caatggcgtt
     4381 ctggtcggct ccgagatctc gcgcggtctc gacatcttcg agctcaagcc gagcgggttc
     4441 atctcccaga acgagatcga cgcggccaag tccgtgcacc tcgactactt caacactcag
     4501 gggcaggtca agctcgtctg gccggcgacc ttctcgctgg cgcgggcgta cgtggatcag
     4561 ctcgaacggt cgaacggtct cgacgccggc aagatcaccg ctgtgcgcga ggcgctggcc
     4621 cgcgaggaga aggcatcggg gacgaagcgg caggacgcgc tgacccagct ggcgacgcgg
     4681 ctggacggcg atgcggccgg agcaggagac tcggcgaagg ttcggaccct cgcgagcgtc
     4741 gtgaggcagc tggccaccgc gccgcgctta gcacggcaat gaaggggttc tgctatttca
     4801 ccacctgaaa cgtgccctga accgggtgcc aatccttcga gctcgacgcg aagccgatca
     4861 ccttctgctc gcggaagttg agaaccacgg taagggtata gcctgacggt gccaggtacg
     4921 acacggcgta tatgtcgtca gccaccctga tcgccgcgta ctccggcttt tccttcgctg
     4981 gtgcgtcctt ctgtgggctg gcggcatcgc gccactccac ggtgccatcg tcgtgaaaga
     5041 cgtgctcatg cgttttgccc ttggtgggac cctccaccca ggtcaatcga atggtcttcc
     5101 cgcgaatcgc cgccgcccgc ggcacatcag tcatcgttcc gatctcctga ttgtggtgcg
     5161 ctaccggtcg cctccctgtc aggcggcgcc gctggcgaag ggtcgagcca cgcgaagctc
     5221 gacccactcc acgtcgcgag cctgaatcac atcccggacg cagcgttctc ggctggtcag
     5281 gccggagcgt ccagtcttga cctccagaaa tacgatacgc cgtatccgac cctcggccag
     5341 accatcaaag accacgaggt ctatggggct gccgagaaag cgaacatcct tcggattgta
     5401 ggggaatgcc ggaaggtacg ggatcagttg ttcgtggacc ttgccggccg ttacggcctg
     5461 acttctctgc accgcatcct cgcgaatagt cgcggtgtaa cgagctttcc acaggaggac
     5521 gtacacccag gccaccagga ggccgatcgc tattccgacg acgagcccga acaggttcgt
     5581 tggcacggag gcctcgcgga aatggggaag tcaggggact gaaatgtggc gtgctctatg
     5641 ctag
//
LOCUS       DASYRV010000214         8792 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2158202, whole genome shotgun sequence.
ACCESSION   DASYRV010000214 DASYRV010000000
VERSION     DASYRV010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8792
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2158202"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..529)
                     /locus_tag="VGQ24_05525"
     CDS             complement(<1..529)
                     /locus_tag="VGQ24_05525"
                     /inference="COORDINATES: protein motif:HMM:NF014045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEV8454327.1"
                     /translation="MHVHHAPHAALLIDFDNVTLGIRSDLTKELRTLLNSDIIKGKVA
                     VQRAYADWRRYPQYIVPLSESSIDLIFAPAFGTNKKNATDIRLAVDATELVFTRPEIG
                     TFILLSGDSDFSSLVIKLKEYGKYVIGVGIRESASDLLIQNCDEYYSYSDLAGLTKEP
                     DTPSAQRDPWELVGEA"
     gene            complement(816..1892)
                     /locus_tag="VGQ24_05530"
     CDS             complement(816..1892)
                     /locus_tag="VGQ24_05530"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEV8454328.1"
                     /translation="MAVSAEEPVLSRLLTEAARELVDDWQVVRQDAASREEVVRALAT
                     LTAALAAGLAGEAPPDLSELSKSQLPRRLLGLLRGRLVRRAAGEVPPPSGSELLSTLL
                     TFELVGQQLEPNWDQRFADRLTGPDGLELVVELAHDLRSPLTSILFLGETIKRGRSGP
                     VTPLQERQLGLIYSAAFGLSSVASDVIELARGGDRLVDLEPLPFAIQDIMESVRDIVQ
                     PIAEEKGLEVRLSPCQRGSRVGHPVALSRILLNLTTNALKFTDEGSVEVSATEVGETG
                     VEFSVRDTGRGIPPQAMAMLFEPFRRRQKDRDYAFSGSGLGLSICRKLVEAMQGDLSV
                     ETTGGVGTRFYFTLQLPLAESGER"
     gene            complement(1892..3424)
                     /locus_tag="VGQ24_05535"
     CDS             complement(1892..3424)
                     /locus_tag="VGQ24_05535"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEV8454329.1"
                     /translation="MGSSVKPGGGAAGLGNDNVAASRDPLSIPADVKASIKILLVDDE
                     RTLRESCASVLQMDGFSVTLAGRGEEARDLLQRRKFDIVLVDLYMSQVSGLEILRAAL
                     EQHKDTIVVVMTGNPSVTSSIEALRAGAWDYLPKPFSATHLQVLIGRASHAVMMSREA
                     SELRQQVLQQHSHSDSIALIGISPLFRKAVELARKVAPTDASVFISGESGTGKEVIAQ
                     FIHQHSRRSRKAMVAVNCAALPEPLLESEMFGHRKGSFTGADRDKPGLLETANGGTLF
                     LDELTEMPLAIQAKLLRVIQDGVVRRVGSETTDAQVDVRFISATNRYPQQAVESGVLR
                     GDLFYRLRVVPISLPPLRQRQEDIPLLANHFLSYYWIRHRGGAVRLPRLSDASISFLR
                     SRPWKGNVRELQNVIEHVAVLVDPDQEIQPTDIPVYEDHEGDPGAERPALLPANDDPY
                     HAAKEKVVAHFEREYFARLVNRAGGNMSKAARLAGVDRTTLYRLMDKHQIPRDERGGE
                     AE"
     gene            3754..6159
                     /locus_tag="VGQ24_05540"
     CDS             3754..6159
                     /locus_tag="VGQ24_05540"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis tyrosine autokinase"
                     /protein_id="HEV8454330.1"
                     /translation="MAGNIVSAKSNATPTVPASLGEAELRPAPTPPEGKSTLNLQRIR
                     AMLLRFKWLIAGILALGTAGSIIATKFIEPQYQVGATIRIEDSNNPRGPLQADELLSS
                     RNWIELLTTYIVMDPVVKKERLFLQPKRKSDLDRFAGFDLADRFLAGKYELSIDNSGK
                     RYLLKREGGLVVGEGALGDSIGIQVGFRWVPALKTFKKDETIAFEILTPREASNALIS
                     DLRTRLGDRANFLRVSLSGQDAKRTASTVNSLLERFVTVAADLKRDNVRRLRIALEEQ
                     LGQAELNLTKAEQELESYRVRTITLPGEEAMPIAPGLQMTQNPTMGTFFQQKTELEAT
                     RRDRKAIEDVLTRAKSGELAVDAFNTIPSVKAAPDLNRILGELSAAEASRRTLLQKYT
                     PEHKLVKDADTTIFTLRTTIIPAYAQALVQQLKQNETDLQGRIGSASRELASIPVRTM
                     TEQRLRRDADAKRAIYTNLNARYEEAKLTELSAIPDVSVLDTAVAPVRPTKNTASRIV
                     MMGVLGSLAAGLGLAFLLDRFDPRFRYPEQASQELGLTILGVVPEIKNGRTTPDETAQ
                     LIEAFRSVRMSLAHSFGSAGPVLLTITSPGAGDGKSLVSANLSLSFAEAGYNTLLIDG
                     DTRRGEMHRMFGMDRRPGLLDYLSGDATIDQIIRAAKHSQLKLIPSGSRRQRGPELLG
                     SARMAQLIAELKGRYDVIITDSPPLGAGIDPFVLASLCGNMVLVLRAGETDREMAESK
                     LQVVDRLPIRLLGVVLNDVRSRTGPYKYYSYISGYASEEESAAWKDEEPPTGNNLPVK
                     RSS"
     gene            complement(6156..7070)
                     /locus_tag="VGQ24_05545"
     CDS             complement(6156..7070)
                     /locus_tag="VGQ24_05545"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8454331.1"
                     /translation="MTNGPLPLDSEARQKPIVLVANDQEWSARSLESILVPEGYDVIR
                     AYTGRQALDRARESLPDLIVLDAQMPDLDGFEVCRLLRADQRFDAVTPIVITTAGPAG
                     REKRLEALRAGAWAFAGQPLDGDILLRQFEVFLASKRAFDETCRRAVTDPLTGLYNLR
                     GIHLRAREMGSEARRQHAPLACVVLAPEPPEGVVLNGYTERIAKRIGRILRQSGRSAD
                     AIGRVEQLEFIVLAAATGTAGAEKLAQRLDALLRSSGEADDAAIGIGPLRLRTALCAV
                     PDFTKENADPVELIAKTRAALADARPPT"
     gene            7444..8220
                     /locus_tag="VGQ24_05550"
     CDS             7444..8220
                     /locus_tag="VGQ24_05550"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015774 - polysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HEV8454332.1"
                     /translation="MLRRRAVLFTLLLASLGAPLHSLRGQNTDTRRVEATRVELEAQL
                     VELEKIVNSPGYSGRLRAAKRAELDLVRQRLTEGDLQVGDRINLTVAGEAQLTDSFTV
                     APGRVLILPGLPEVPLQGILRAEVPSHLTTHLKKYLRDPQVYAQTLIRLSIFGAVGKP
                     GFYQVPAEQLAGDAIMQAAGGPSANADPHKTTVRRNGVEIWSKEAFQEALVQGVTLDK
                     LNLRAGDEIIVGTKKSFNPLQYVYVVTATSSLFFLATRIF"
     gene            8241..>8792
                     /locus_tag="VGQ24_05555"
     CDS             8241..>8792
                     /locus_tag="VGQ24_05555"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HEV8454333.1"
                     /translation="MLPPARPQRSHRNERNLPSGDRHLRLVVPAGSAELTLRGLWRER
                     LERISNISIAVIALVVTLPLWLLIAILIKLTSRGPVFYHQIRIGLDSRSTDQQSSDPR
                     RSKDLGGRPFRIYKFRTMTVDAEGKSGAVWASRNDPRVTVVGRILRQLRLDELPQFIN
                     VIRGEMNIVGPRPEQPTLFAELRD"
BASE COUNT         1631 a         2894 c         2657 g         1610 t
ORIGIN      
        1 cggcctctcc caccagctcc cacggatcgc gttgtgccga gggcgtgtcc ggctccttgg
       61 tcagcccggc cagatcgcta taggagtagt actcgtcgca gttctgaatc agcagatcgc
      121 tcgccgattc ccggatcccc acgccgatca cgtacttgcc gtactctttg agtttgatca
      181 ccagcgagga gaaatcgctg tcgcccgaga gcaggatgaa ggttccgatc tccggccggg
      241 tgaacaccag ctcggtcgcg tccaccgcca ggcggatgtc ggtcgcgttc ttcttgttgg
      301 tgccgaaggc gggcgcgaag atgagatcga tggacgactc ggacagcggg acgatgtact
      361 gtggatagcg gcgccagtcg gcgtaggcgc gttgcaccgc caccttgccc ttgatgatgt
      421 cgctgttgag cagcgtgcga agctccttgg tgaggtcgct tcggatgccc agcgtcacgt
      481 tgtcgaagtc gatcaggagt gctgcgtgcg gggcgtgatg gacgtgcacc ggcactgggg
      541 cgggcgggct ggacgtctgg tgacttgacg gccggctgac ccgatgggtc gggtgactca
      601 aaggtttttc ttctccgcgg cccgcctggt ttgccgctcc ccccgcttcc cgggccccgt
      661 cacaggggtc aaggaattcg gcgcaggagc ttgaacagcg ggtgccgcat taggtccgga
      721 tcattccgaa gaccccattg gtccccggct gtccagaggt gcaaactagc taacccgttg
      781 ccacaacggt agtaccactt ctcgcctctt acccctcacc tctcaccact ctcagccagt
      841 ggaagctgca acgtaaagta gaagcgggtc ccgaccccac ccgtcgtctc gacgctgaga
      901 tcgccttgca tggcctcgac cagcttgcgg cagatcgaca gcccgagccc cgatcccgaa
      961 aaggcgtaat cccggtcctt ctgacgccgg cggaacggct cgaacagcat cgccatggct
     1021 tgcggcggaa ttccccggcc cgtgtcccga accgagaact cgacgccggt ttctcccacc
     1081 tccgtcgcgc tgacctccac actgccttcg tcggtgaact tgagcgcgtt ggtggtcagg
     1141 ttgagcagga tccggctcag ggccaccgga tgtcccaccc gcgagccgcg ctggcaggga
     1201 gacaagcgga cctcgagccc cttctcctcc gcgataggct ggacgatgtc ccgcaccgac
     1261 tccatgatgt cctgaatcgc gaacggcaac ggttcgaggt ctaccaggcg atcgcccccg
     1321 cgcgcgagct cgatcacatc gctggccacc gagctcaatc cgaatgcagc gctgtaaatg
     1381 aggccgagct gccgctcctg cagcggggtc accggaccgc tgcggccccg tttgatcgtc
     1441 tcgcccagga agagaataga ggtgagcgga gagcggagat catgcgcgag ctccaccacc
     1501 agctcgagtc cgtccggacc ggtcagccgg tccgcaaagc gctgatccca gttgggctcg
     1561 agctgctggc cgaccagctc gaaggtcagc agggtactca gcagctcgct gccggatgga
     1621 ggaggaacct cccccgccgc gcggcgcacg agtcgtccgc ggagcagacc gagcagccgg
     1681 cggggcagtt gtgatttgga gagctcgctc aggtccgggg gagcctcgcc cgcgagccct
     1741 gccgcgagtg ccgcggtgag cgtagcgagc gcgcgaacga cttcctcacg ggaggccgcg
     1801 tcctgccgca cgacttgcca atcgtcgacc agctcccggg cagcctccgt gaggagccgc
     1861 gataagaccg gctcctccgc ggagacggcc attattcggc ttccccgccg cgctcgtctc
     1921 gcgggatttg atgtttgtcc atcaaacgat agagcgtcgt gcgatctaca cccgccaggc
     1981 gcgccgcctt cgacatgttg ccgccggccc ggttcaccag acgggcgaag tattcccgct
     2041 cgaagtgcgc aaccaccttt tccttggccg cgtggtaggg atcgtcgttg gccggcagca
     2101 gggcgggccg ttcggcgccc ggatcgccct catggtcctc gtacaccgga atgtcggtcg
     2161 gctgaatctc ctggtcggga tccaccagta ccgcgacgtg ctcgatcacg ttctgcagct
     2221 cgcgaacgtt ccccttccag ggtcgcgagc ggaggaagct gatgctggcg tcgctcaagc
     2281 gggggagccg caccgcgccg ccccggtgcc ggatccagta atagctcaga aagtggttgg
     2341 ccaagagcgg aatgtcttcc tgccgctgcc tcaggggcgg cagcgagatc ggcaccaccc
     2401 ggagccgata aaagaggtca ccccgcaata cgccgctttc cacggcctgt tgcggatacc
     2461 ggttggtcgc ggaaatgaag cgcacgtcta cctgggcatc ggtggtctcc gagcccaccc
     2521 gccgcacgac cccgtcttga ataacccgca gcagcttggc ctggatcgcc agcggcatct
     2581 cggtgagctc atcgaggaac agcgtgcccc cgttggccgt ttcgagcagt ccgggtttgt
     2641 cccggtcggc gcccgtgaac gatcccttgc ggtggccgaa catttccgat tcgagcaggg
     2701 gctccggcag ggctgcgcaa ttcaccgcca ccatggcctt gcggctccgc cggctgtgct
     2761 ggtgaatgaa ctgcgcgatg acttccttgc cggtgccgct ctccccgctg ataaacaccg
     2821 aagcatcggt cggcgccacc ttgcgcgcca gctcgaccgc cttgcggaag agtggcgaaa
     2881 tcccgatcaa agcgatcgag tcgctgtgac tgtgctgctg cagcacctgt tgcctgagct
     2941 cgctggcctc gcggctcatc atcaccgcgt gcgaggcgcg gccgatcagc acctggaggt
     3001 gcgtcgcgct gaacggcttg gggaggtagt cccaggcccc cgcgcgcaac gcctcgatgc
     3061 tcgaagtcac gctgggattc cccgtcatga ccaccacgat cgtgtctttg tgctgctcga
     3121 gggcggcccg cagaatctcc agtccggaga cctgtgacat gtaaagatcg accagcacga
     3181 tgtcgaactt gcggcgctgc agcagatcac gcgcttcttc cccgcgtccc gccagcgtta
     3241 ccgaaaagcc gtccatctgc agcacgctcg cgcaactctc gcgcagggtg cgctcgtcgt
     3301 ccaccagcag gatcttgatg ctggctttga cgtcggcagg aatcgacaac ggatcgcggg
     3361 aagccgcgac gttatcattt cctaacccgg ctgcaccgcc gcctggtttg accgagctgc
     3421 ccatgaatta cctctgaatt ggagccacaa cacctgctgc gctgctgtgt ggcgaggcga
     3481 atagtgtgcc acctttactt cataatgcca tatggatgtt gcatagtgtc tgcgttgcgg
     3541 ctcgctccac gcaatgcgat cgttgctcgc aatttacact tgtgtggtat ttgcgcaaca
     3601 ataatcggga gagttttgcg gaacacgggg aacggtcaga ttaatgcaca ggtattgcat
     3661 ttgctttagg ggagagcctc tgtatttctt aagtctgcca aagcaacggc gtcgcggccc
     3721 cgaccggcgg gccttcgagg agcaggtgtg ggcatggctg gcaacatcgt aagcgccaaa
     3781 tccaacgcga cgcccaccgt ccccgccagc ctcggcgagg ccgagctgcg gcctgctccg
     3841 actccgcccg aggggaagag cacgctcaac ctccagcgca ttcgggcgat gctgctgcgt
     3901 ttcaagtggc tcatcgcggg aatcctcgcc ttgggaaccg ccggcagcat catcgccacc
     3961 aaatttatcg agccccagta tcaggttggc gcgaccatcc ggatcgagga ttccaataac
     4021 ccacgcggcc ccttgcaggc cgatgagttg ttgagctccc gcaactggat cgagctgctc
     4081 accacctata tcgtgatgga tccggtggtg aagaaggagc gactcttcct gcagcccaaa
     4141 cggaaatcgg atctcgaccg ttttgcgggc ttcgacctcg ccgatcgttt cttggcgggc
     4201 aaatacgagc tgagcatcga taatagtggc aagcgttacc tgctgaagcg cgaaggcggc
     4261 ctcgtggtgg gtgaaggagc gctgggcgat tccatcggga ttcaggtcgg cttccgctgg
     4321 gtgcccgccc tgaagacctt caaaaaggat gaaaccatcg cctttgagat cctcaccccc
     4381 cgggaggctt ccaacgcgct catctcggat ttgaggaccc ggctcggcga ccgcgccaac
     4441 tttctgcgag tcagcctgtc tggccaggac gcaaagcgga ccgcctcgac cgtcaattca
     4501 ctgctcgagc gatttgtgac cgtggccgcg gatctcaagc gggataatgt gcgacggctc
     4561 cgcatcgcgc tcgaggagca gctgggccag gccgaactga atttgaccaa ggccgaacag
     4621 gagctcgaga gctatcgggt gcgcaccatc accctgcctg gtgaagaggc catgccgatc
     4681 gcgccgggac tccagatgac tcagaacccg acgatgggca ccttcttcca gcagaagaca
     4741 gagctcgaag ccactcgccg ggaccgcaag gccatcgagg acgtcctgac gcgggccaaa
     4801 tcgggggaat tggcggtaga cgcctttaac accatcccct ctgtgaaagc ggccccggac
     4861 ctgaatcgaa tactcggcga gctctcagcc gcagaggcct cgcgccgcac actactccag
     4921 aaatacacgc ccgagcacaa gctcgtgaag gacgcggata ccacgatttt tacgctgcgc
     4981 accacgatca ttccggctta cgctcaggcc ctcgtccagc agctcaagca gaacgaaacg
     5041 gatctccagg gacgcatcgg cagcgcctct cgagagctgg cctcgattcc ggtccggacc
     5101 atgaccgagc agcggcttcg ccgtgacgcg gatgcgaagc gggcgatcta taccaacctc
     5161 aacgcccgct atgaggaggc caagctcacc gagctcagcg ccatccccga tgtctcagtg
     5221 ctcgacacgg ctgtcgctcc ggtccggcct accaagaata ccgcgtcacg tattgtgatg
     5281 atgggtgttc tcggaagctt ggctgcaggg ctgggcttgg cattcctgct ggatcgcttc
     5341 gacccacgct tccgctatcc ggagcaggcg agccaggagc tcggactcac catccttggt
     5401 gtggtccccg aaatcaagaa cggccgcacc acgccggacg agaccgccca gttgatcgag
     5461 gcatttcgct cggtccgaat gagcctagcc cactccttcg gctccgcggg tccggtcctc
     5521 cttaccatca ccagccccgg cgccggcgat ggcaagtcac tggtctcggc taacctgtcg
     5581 ctgtcgttcg cggaggcggg gtacaacacc ctcctgatcg atggtgacac ccgccgcggg
     5641 gagatgcacc gcatgttcgg gatggatcgc cgtcccggcc tgctcgatta cctgagcggc
     5701 gatgccacca tcgaccagat cattcgagcg gccaagcaca gccagctcaa gttgattccc
     5761 tcaggatccc gccggcagcg aggtcccgag ttgctgggct cggcccgaat ggcccaattg
     5821 atcgcggagt tgaaaggacg ctatgacgtg atcatcaccg atagcccgcc gctgggcgcg
     5881 ggcatcgatc ccttcgtgct ggccagcctg tgcggaaaca tggtgctggt gctgcgggcg
     5941 ggagagaccg atcgcgaaat ggcggaatcg aagcttcagg tggtcgatcg gctgccgatc
     6001 cggctcctcg gtgtcgtcct gaacgacgtg cgctcccgca ccggtcccta caaatactac
     6061 tcttacattt ccggatacgc gtcggaagag gaatccgcgg cgtggaaaga cgaagagccg
     6121 cctaccggca ataacctgcc ggtcaaacgc tcgagttaag tgggtggcct ggcgtcggcc
     6181 agcgcggcgc gggtcttggc gatgagctcc accggatcag cattctcctt ggtgaaatcg
     6241 ggcaccgcac agagcgccgt ccgtaatcgc agcggaccaa tcccgatggc ggcgtcatcc
     6301 gcctcaccag aggaccgcag caaggcgtct aaccgctggg ccagcttctc cgcccctgct
     6361 gttccggtgg cggcggcgag gacaatgaat tcgagctgct cgacccgtcc gatcgcatct
     6421 gccgaccggc ccgactgtcg cagaattctt cctatccgct tggcaatccg ctcggtgtag
     6481 ccgtttagaa cgacaccctc cgggggctca ggagccagta ccacacaagc caggggtgcg
     6541 tgttgtcgcc tggcttcact tcccatctcc cgcgcccgca ggtggatgcc gcgaagattg
     6601 tagagcccgg tgagcggatc cgtcaccgca cggcggcagg tttcgtcaaa ggcccgcttg
     6661 gaggccagaa agacctcgaa ttggcgcagc agaatgtcac catcgagtgg ctgcccagcg
     6721 aaggcccagg cacccgcacg cagtgcctcg agccgctttt cgcgccccgc cggcccggcc
     6781 gtcgtgataa cgatcggcgt gaccgcgtcg aaacgctggt cggcacgcag caaccgacat
     6841 acctcaaagc cgtcgaggtc gggcatctgc gcgtcgagca caatcaagtc tggcaaggac
     6901 tcccgagcgc gatcgagggc ctggcgaccc gtgtaagccc ggatcacgtc gtatccctcg
     6961 gggacgagta tgctctccag cgatcgcgct gaccactcct ggtcgttcgc aaccaggact
     7021 atcggcttct gacgcgcctc cgaatcgagt ggcaaggggc cgtttgtcac gctggatctc
     7081 cgagaggcaa accgttgcac ggctcccaca gaatcgggcc gtgcctgcaa cacaatagca
     7141 cgccgccaaa ccggctcagg agaggttcaa aacaatctca tcttggcact gcgccctaaa
     7201 atcttacaat tgaataggtt aaggcatagc gccgggtcca gtccgaactg gcctacggcg
     7261 aggcgatccc ggccggagct aaaagcttct cgcaattgtc tcgccgcagc tatccaagag
     7321 ttagacaaac gatccccgaa aagcggggct ttaacctctc tgggcggaac gcatcttgct
     7381 cctccccaga tagcttccaa aggtcgtctg aatcttcatc cttgccattg agaaaaggtc
     7441 agcatgcttc gacgtcgcgc ggttctcttc acgctgttgc tcgcgtcgct cggagcaccg
     7501 ctccattcct tgcggggcca gaacaccgac acgcgccggg ttgaagcgac ccgggtcgag
     7561 ctcgaggcgc aattggtcga gctcgaaaag atcgtcaatt ctccaggcta tagcggccgc
     7621 cttcgcgcgg ccaagcgtgc cgagttggac ctcgtccgcc aacggcttac cgagggagat
     7681 ttgcaggtcg gtgaccggat caacctgacc gtcgcgggtg aagcacagct caccgactcc
     7741 ttcaccgttg cccccggacg agtgctcatc cttccagggt tgcccgaggt tcctctccag
     7801 ggaatcctgc gtgccgaagt tccgagccat ctcaccacgc atctcaagaa atacctccgt
     7861 gacccccagg tgtacgcgca gaccttgatc cgcctgagca ttttcggcgc ggttgggaag
     7921 cccggcttct accaagtccc cgccgagcag ctcgcgggcg atgcgatcat gcaggcggct
     7981 ggagggcctt ccgcaaacgc ggacccgcac aaaaccaccg tccggcgcaa tggcgtcgag
     8041 atctggtcga aagaggcctt ccaggaggca ctggtacagg gggtcaccct cgacaagctc
     8101 aacctccggg cgggggatga gatcatcgtc ggaactaaga agtcattcaa cccgctccag
     8161 tacgtctatg tggtcaccgc gacctcgagt ctcttcttct tagcaacccg gatcttctga
     8221 gcgacccgcc caagtctcct atgctgcccc cggcccggcc gcagcgctct caccgcaacg
     8281 agcggaacct cccgagtggt gaccggcacc ttcggctggt cgtgcccgcc ggctctgcgg
     8341 agctcactct gcgcggcctg tggagggaac ggctggagcg gatcagcaat atcagcatcg
     8401 cggtgattgc cctggtcgtg accttgccgc tctggctcct catcgcaatc ctgatcaagc
     8461 tcacttcgcg cggtccggtc ttctatcacc agatccgcat tgggctcgac agccgcagca
     8521 ccgaccagca gtcctccgac cctcgccgaa gcaaggatct cggcggacgg cctttcagga
     8581 tctacaagtt caggacgatg accgtggatg ccgagggcaa gagtggtgcg gtctgggctt
     8641 ctcgcaacga tcctcgggta accgtagtcg gtcggattct ccgccagctc cgcttggacg
     8701 agctgcccca gttcatcaac gtaatccggg gtgaaatgaa catcgtgggc ccccgccccg
     8761 agcagcccac cctcttcgcc gagctacgcg ac
//
LOCUS       DASYRV010000215         2356 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3611677, whole genome shotgun sequence.
ACCESSION   DASYRV010000215 DASYRV010000000
VERSION     DASYRV010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2356
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3611677"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1320
                     /locus_tag="VGQ24_05560"
     CDS             <1..1320
                     /locus_tag="VGQ24_05560"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEV8454334.1"
                     /translation="AGARILLDAGLFQGRRSEAHALNARLPFDARRIDGAVLSHAHID
                     HSGRLPLLVKEGFHGPVYATSATRDLTAVMLADAAHIQQSDYEFLRHHGKAAPESEPL
                     YTLRDAAAVQDLMLGVPYRRVFYLRKHLALEFLEAGHIIGSATVDLRVTEDGSHRLVF
                     SGDIGRSGLPIVRDPEPPSGPIDTLVIEATYADRQHESFTDAEAHLGDAVSRTAARGG
                     KVLIPAFAVGRAQELIYSLHRLFRAGRIPSIPIYVDSPLAIDITTVFRMHPEVFDRRE
                     ELIEATNELFDFTLLHYVREVSDSKALNSANGPAVIIAASGMAESGRILHHLAHGIGD
                     HRNLVLFVGFLVEHTLGRRIASGQDVVRIMGQEYQRKAEVETIAGYSAHADRDELRAW
                     VRRLGGPIRRAFVVHGEPASLEAMAAILREEGVRDVHVPRHGESFDL"
     gene            1310..1969
                     /locus_tag="VGQ24_05565"
     CDS             1310..1969
                     /locus_tag="VGQ24_05565"
                     /inference="COORDINATES: protein motif:HMM:NF014724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEV8454335.1"
                     /translation="MISRARDPVARSLLRRLRRAVGLTVLAAVSIYTVALVMVLVVSQ
                     QDQRRAVDAIVVLGAAQYNGRPSPVLRARLDHALRLYNEGYAPRIVVTGGVGRGDTTS
                     EAIVGRHYLLARDVMPGDVVVQPQGRSTQASMTAVADWLESEGLHSVILVSDPFHMYR
                     LRLEARRTNLDAYTSPTESSPISDNPVVELRYLAAEGFKIPVAWARATLSPFTSHPNV
                     P"
     gene            1966..>2356
                     /locus_tag="VGQ24_05570"
     CDS             1966..>2356
                     /locus_tag="VGQ24_05570"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEV8454336.1"
                     /translation="MTLVSSERLHSGRVINLDRDTVRFPDGSTGQLEVIRHPGASAVV
                     PFLDEPRGADPRIHIIRQFRHAANGPIWEIPAGRLDPGETPSTCAQRELEEEIGMTAD
                     VLARLTTIYTTPGFTDEKIHLFLAHELR"
BASE COUNT          382 a          815 c          741 g          418 t
ORIGIN      
        1 gccggagccc gcattctgct ggacgccgga ctgttccagg gccgccggtc agaggcgcac
       61 gcgctcaatg cgcggcttcc cttcgacgcc cggcgaatag atggcgcggt gctgagccat
      121 gctcacatcg accactccgg gcgcctgcct ctcctggtca aggaaggttt tcacggcccg
      181 gtgtacgcga cctccgcgac gcgcgacctc actgcggtca tgctcgccga tgccgcacac
      241 attcagcaga gcgactacga gttccttcgc catcacggca aagccgcgcc ggagagcgag
      301 ccactctaca ccctgcgcga cgctgccgcg gtgcaggacc tcatgctcgg cgtgccttat
      361 cggcgggtct tctacctccg caagcacctg gcactggagt tcctggaggc cggccacatc
      421 atcggctcgg ccacggtcga ccttcgggtg accgaagacg gcagccaccg cctggtgttc
      481 tccggtgaca tcggccgaag cggccttccc atcgttcggg accccgagcc gccttcgggc
      541 ccgatcgaca ccctggtcat cgaagcgacg tacgccgacc ggcagcatga gtcgttcacc
      601 gacgcggagg ctcacctggg cgatgccgtg agtcgcactg cggcccgcgg cggcaaggtg
      661 ttgataccgg ccttcgcggt gggccgcgcc caggagctga tctacagcct gcatcgcctc
      721 tttcgggcag gccgcatccc ctcgatcccg atctacgtcg acagcccgct cgcgatcgac
      781 atcaccacgg tattccgcat gcacccggaa gtcttcgatc gccgggagga actgatcgag
      841 gccaccaatg agcttttcga cttcacgcta ctccactacg tgcgggaggt ctccgactcg
      901 aaggcgctca actccgccaa cgggccggcg gtgatcattg ccgcctccgg catggccgag
      961 tcaggccgca tcctccatca tttggcccac ggcatcggcg atcaccgaaa cctcgtcctc
     1021 tttgtcgggt tcctggtgga gcacaccctg ggacgccgga tcgcgagcgg acaggatgtc
     1081 gtccgtatta tggggcagga ataccagcga aaagccgaag tggagacgat cgcggggtac
     1141 tccgcccacg ccgaccggga cgagcttcgg gcctgggtcc gcaggctcgg tgggccgatt
     1201 cgccgggcct ttgtggtgca tggtgagccc gcctccctcg aggccatggc tgcaatcctc
     1261 cgggaggagg gggtccgtga cgttcacgtg ccccgtcacg gggagtcgtt tgatctctag
     1321 ggcgagggat ccggtcgctc gatctctcct ccggcggctg cgccgagccg tcggcctgac
     1381 tgtcctggcc gccgtgtcca tctacaccgt ggcgctggtg atggtgctgg tcgtgagtca
     1441 gcaggaccag cgtcgggcgg tcgacgcgat cgttgtactc ggcgccgccc agtacaacgg
     1501 acggccctcc ccggtgctcc gagcgagact ggaccacgcg ctccgcttat acaatgaagg
     1561 gtacgctccc cggatcgtgg ttacgggcgg cgtgggccgg ggcgacacca ccagcgaagc
     1621 gatcgtggga cggcattatc tcctggcgcg cgatgtcatg ccgggcgacg tcgtggttca
     1681 gccccagggc cgctccaccc aggcttcgat gactgcggtg gccgactggc tggaatcgga
     1741 gggcctgcac agcgtgatcc tggtgagcga tccctttcac atgtatcggc ttcggctgga
     1801 ggcgcggcga accaatctcg atgcctacac ctctcccacc gagagcagtc cgatatccga
     1861 caatcccgtg gtcgagctgc gctatcttgc ggcggagggg ttcaagattc ccgttgcctg
     1921 ggcccgggcg acactgtccc cgttcacctc tcaccccaac gtcccatgac gctcgtctcc
     1981 tcggaacgat tgcacagcgg ccgggtgatc aacctggacc gggatacggt gcgtttcccc
     2041 gatgggtcca ccggccagct ggaggtgatt cggcatccgg gcgcgtccgc ggtagttcct
     2101 tttctggatg aacctcgcgg ggcagatccc cggattcaca tcattcgaca attccgccac
     2161 gcggccaacg gccccatttg ggagatcccc gccgggcggc tcgatccagg cgaaaccccc
     2221 tccacctgcg cccaacgcga gctggaggaa gagatcggca tgacggccga tgtgctggcc
     2281 cggttgacca cgatctacac cacccccggc tttaccgacg agaagatcca cctgttcctc
     2341 gcccacgagc tgagaa
//
LOCUS       DASYRV010000216         2357 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1324582, whole genome shotgun sequence.
ACCESSION   DASYRV010000216 DASYRV010000000
VERSION     DASYRV010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2357
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1324582"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..507)
                     /locus_tag="VGQ24_05575"
     CDS             complement(<1..507)
                     /locus_tag="VGQ24_05575"
                     /inference="COORDINATES: protein motif:HMM:NF015782.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Slp family lipoprotein"
                     /protein_id="HEV8454337.1"
                     /translation="MTNRYRLATISLLLGVLFGCSSGPDVIPKPLESQIDRSVTFDQI
                     AQTPDSYVGRTVVVGGEVLKATRRSEGTELEVLELPLDKHHRPAGQRMASRGRFLALD
                     RQGMDPAAFPPGMPVTVVGEVRGATTQRLDESQQRYAMLDIKHVHAWTEDPYERRGWG
                     PSVGVGVGV"
     gene            885..2093
                     /locus_tag="VGQ24_05580"
     CDS             885..2093
                     /locus_tag="VGQ24_05580"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEV8454338.1"
                     /translation="MLPEPVSPPVIAPENPTGLSHTETLLRDGTACLAAGDAACAVAA
                     LREAIRLDPTQHRAHDTLGLALAQQGDLDGAIEAFRTALRLQPGFAPAHLHLGTVLMT
                     RQEWSAAAHELDEAIHLEPESAQAHATLGAVRYATGDRAGAIGAYRVATTLKPDYPDA
                     HYHLGVLLKLVGQEPEAAAEFTIAAHAGMAMAQYFLASAYAGGAGIDRNLVEAVRWYF
                     RAADQGHMQAKEALSKLRRTAMMEGSRDASRAEEAAHAFEVYRAHIRAEANVPVTDAS
                     SGEPADITIPLHDRLLRTGRADLAVALLIREASALSIEAQAFLENWYEHGVEGQLPPF
                     DIRILTYFQTAAAEGLPQPRRALARILAQGLGVERDLAKATALLKGDQDQAAQELLKE
                     IAAARREAAR"
     gene            2177..>2357
                     /locus_tag="VGQ24_05585"
     CDS             2177..>2357
                     /locus_tag="VGQ24_05585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454339.1"
                     /translation="MAWVIWITAPAVITALERSPYDAWLRQREPQPVSPAITVIARDA
                     ASEARFGASSWSRSLL"
BASE COUNT          432 a          789 c          698 g          438 t
ORIGIN      
        1 gacgccgacc cctactccaa cagatggccc ccagccccgc cgctcgtagg gatcttcggt
       61 ccaggcatgt acatgcttga tgtccagcat cgcgtagcgc tgctgactct catcgagacg
      121 ctgcgttgtg gcacccctga cctcaccgac gaccgtcacc ggcatgcccg gtggaaacgc
      181 ggccggatcc atgccctgtc tgtccaaggc caaaaacctg ccccgcgagg ccatccgttg
      241 tccggccgga cgatgatgct tgtccagcgg gagctccagt acctcgagct cggttccctc
      301 gctgcgccgc gtcgccttca agacctcgcc acctacgacg acggtccggc caacatagga
      361 atccggggtc tgtgcgatct gatcgaaggt cacggacctg tcgatctggg attccagagg
      421 cttgggaatg acgtccggac cggacgaaca gccgaacagc actcccagca gcagcgagat
      481 ggttgcgagt cggtatcggt tcgtcatgcc tttactataa tggtaggggg cgaggaaggg
      541 tattggccta gttacgtaga tccgcgctgg aggccgcccg gcagctcggc ctgatgatgc
      601 tataatagat ggcgattttc gcctttgcag gagtcgtcag aattaccgtg tttcacctct
      661 ctagggttgt ccctctcatc tcggtccttc cgctgttgat cgtcctattc tctttcggtt
      721 gtcatccgcg acccgcggcc attccacacg tctcccaatc agcccctcgt gaaataccgc
      781 ctgtggccac ggagcctttg gagccagtcg tcccgccagc ccctgccgaa acacctcccg
      841 ctcccccggc agcatccacg gcagaagccc cttctatagt agagatgctt cccgaaccgg
      901 tctctccccc ggtgatcgcc cctgagaatc cgaccgggct gtcacacact gaaacacttc
      961 ttcgcgatgg caccgcgtgc ctggcggccg gtgatgcggc gtgcgcagtc gcagctcttc
     1021 gggaagccat tcgcctcgac ccgacgcagc accgcgcgca tgacacctta gggctcgcac
     1081 ttgctcaaca aggcgatctg gatggtgcca tcgaagcctt ccggacagcc cttcggctcc
     1141 aaccaggatt cgcgccggcc catctccatc ttggcacggt gctgatgacc cgacaggaat
     1201 ggagtgccgc agcacatgaa ctcgatgagg ccatccacct ggagcctgaa tcggcgcagg
     1261 cgcatgcgac cctcggcgcg gtgcgatacg ccaccggcga tcgagcaggt gcaatcgggg
     1321 cctaccgcgt cgcgaccacg ctcaagccgg actaccctga cgcgcactat catctcggcg
     1381 tgctcctgaa gctggtcggt caggaacctg aagcggccgc cgaattcacg attgcggctc
     1441 acgccggcat ggccatggcc cagtactttc tcgcctctgc ctatgctggt ggcgcaggaa
     1501 tagaccggaa tctcgttgag gcggtccgct ggtacttccg ggccgcagac cagggccaca
     1561 tgcaggccaa agaggccctc tcgaagctgc gtcggacggc gatgatggag ggatcccgcg
     1621 atgcatccag ggcagaggag gccgcgcacg cattcgaggt ctatcgagcc cacatacgag
     1681 cggaagcgaa tgtgccggtg actgatgcaa gcagtgggga acccgctgac atcaccatac
     1741 cgctccacga ccgtctgctc cgtacaggga gagcggatct tgccgtggcg ctgctgatcc
     1801 gggaagcctc tgctctgagt atcgaggcgc aggccttttt ggagaattgg tacgagcacg
     1861 gcgtcgaagg acagttgcct ccctttgaca tccgcattct gacctatttt caaaccgcgg
     1921 cagccgaagg tcttccacag ccgcgccgcg ccctggcccg catccttgcc caaggcctcg
     1981 gcgtcgagcg agacttggcg aaagcgacgg ccttgctgaa gggtgatcag gaccaggcgg
     2041 cccaagagct cctcaaagag attgctgcgg cgcgccgcga ggccgcacgt tgatggcacc
     2101 ctccactcac acaggtgcgg cccccgttgc gcacgcgatc gcgcaatcca tagggattgc
     2161 gctcctggcg acgctgatgg cgtgggtcat ttggatcacg gcgccagcgg tgatcaccgc
     2221 cctggaacgt agtccctacg acgcctggct tcgacagcgt gaaccacagc ccgtcagccc
     2281 cgcgatcaca gtgattgccc gtgacgcggc aagcgaagca cgctttggcg cctcgagctg
     2341 gagccggtct ttgctcg
//
LOCUS       DASYRV010000217         3703 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1324632, whole genome shotgun sequence.
ACCESSION   DASYRV010000217 DASYRV010000000
VERSION     DASYRV010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3703
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1324632"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1153)
                     /locus_tag="VGQ24_05590"
     CDS             complement(<1..1153)
                     /locus_tag="VGQ24_05590"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEV8454340.1"
                     /translation="MIETSDRGLDHSLNPAQREAVEHVEGPLLVLAGAGSGKTRVLTM
                     RIAALIDRHGVPPDRIFAVTFTNKAAGEMKQRIGQLLDRDPSGLWIGTFHSLAARLLR
                     REAELLGFSRRFTIYDEDDRLSLIRRLMEQQGHSTKLFPPRAVQSVISAAKNRMVPPS
                     ELAAGGGFDRLALVAAEVYSALGPALKGANAMDFDDLLLHPLTLFREHPDRLRAYQSR
                     FNFILVDEFQDTNRAQYELVRLLGAHGNVCAVGDDDQSIYGWRGADVRNMQDFLKDFP
                     GAKLIRLEENYRSTQVVLDAANGVIAENSGRIGKTLTTRRRGGESVTLVAAADERDEA
                     EWVVRELQKRSAAADWQYREMAVLYRTNSQSRALEEAFRRAGVPYRLIGA"
     gene            complement(1150..2313)
                     /locus_tag="VGQ24_05595"
     CDS             complement(1150..2313)
                     /locus_tag="VGQ24_05595"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEV8454341.1"
                     /translation="MRSERLQRLAPRIVVALVALLAGLSFGTGILIFRHFQADATATS
                     RLYSGVFGGLNNPRPGAEAEALLRLGEQVRSLGLPLVVTDGTGRVTAAANLPFEAPLD
                     DPRVKLYAARLDRQNPPISDAAVGTVHYGPLPAQRNLIALAVLQGLTIAVMVAVAVFA
                     YRSAMAAQRDRLWVAMAREAAHQMGTPLTSLQGWIERVRSRATPPPDLADHLSADAER
                     LDRVAQRFERIGNPAKREPIGLGALADRVAGYFRPRLPRHANMIDLRVEAPGAGPTVL
                     GDPVLLEWALEALVKNAIDALQGRPGAIILRVSADDGMGAIRVIDDGPGIAKELRRTL
                     FEPGITTKRGGWGIGLALSRRVVEDAHQGALTLEQTEKGTCFLIRVPLAGPET"
     gene            complement(2306..3589)
                     /gene="serS"
                     /locus_tag="VGQ24_05600"
     CDS             complement(2306..3589)
                     /gene="serS"
                     /locus_tag="VGQ24_05600"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR00414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEV8454342.1"
                     /translation="MIDVKRLRQDPAGSRASLMRRGDAGLAAILDDLLDLDRQRRDVL
                     VRVETLKAERNAASDEVARRKRAKEPVDDLMERLKASGDEVKSLDGRLREIETALDER
                     ALAVPNFPHEGSPDGDAAANRVLRTWGTPPKVDFTPRPHWDLGAGLGLFDLPAGAKIT
                     GSGFPLFTGLGAKLGRALAGFMLDLHTREHGYLEVAPPYLVNRPSLTGTGQLPKFAEE
                     IYASPGDDLFLIPTAEVPVTNIHRDEILEASALPATYVAYSPCFRREAFSHGKDTRGL
                     IRVHQFDKVELVRIVRPEESPAEHERITTHAEAVLQRLALPYRVVELAAGDTGFASAR
                     TYDIEVWAAGVGDWLEVSSSSTFTDFQARRANIRYRPSPKAKPEFVHTLNASGVAFPR
                     TIIALLENNQAADGSVRVPEALVPYLGVDRLRPRA"
BASE COUNT          634 a         1255 c         1207 g          607 t
ORIGIN      
        1 tggctccgat cagccggtac ggtacgcccg cgcggcgaaa tgcctcttcc agcgctcgag
       61 actgcgagtt ggtccggtac aggaccgcca tctcgcggta ctgccagtcc gctgcggcgc
      121 tgcgtttctg cagctcccga accacccact cggcctcgtc ccgctcgtcc gccgccgcga
      181 ccagggtgac cgattcccca ccccgccgcc gtgtggtgag cgtctttcca atccgtccgc
      241 tgttttcggc gatgacgccg ttcgctgcat ccagcacgac ctgggtggac cggtagttct
      301 cctccaggcg aatgagcttg gcgcccggaa agtccttcag gaagtcctgc atgttccgga
      361 catcggcgcc gcgccagccg tagatcgatt ggtcgtcatc gccgactgcg cagacattgc
      421 cgtgggctcc aagcagcctc accagctcgt actgggcccg gttcgtgtcc tggaactcgt
      481 ccaccaggat gaagttgaac cggctctggt acgcgcgcag ccgatcggga tgctcccgga
      541 acagcgtcaa cgggtgcagc agcaggtcat cgaagtccat cgcgttggcg cctttgagtg
      601 ccgggccgag cgcggagtac acctcggccg ccaccagggc gaggcgatcg aacccgcctc
      661 ccgccgccag ctcggaaggg ggcaccatcc ggttctttgc cgccgaaatg accgactgca
      721 ctgcccgagg agggaacagc ttcgtcgaat gcccctgctg ttccatcagc cgtcgaatca
      781 gactcagccg gtcgtcctcg tcgtagatgg taaaacggcg agagaacccc agcagctccg
      841 cctcgcgccg cagcagccgg gccgcgaggg agtggaacgt gccgatccac agacccgatg
      901 gatcgcgatc gagcagctgg ccgatacgct gcttcatctc gcccgcggcc ttgttggtga
      961 aggtgacggc aaagatccgg tcgggcggca ccccatgacg atcgatcagg gcggcaatcc
     1021 gcatggtcag cacgcgggtc tttcccgagc cggcgcctgc gagcacgagc agtggccctt
     1081 ccacatgctc caccgcctcc cgctgggccg gattcagtga atgatccagc ccgcgatcgg
     1141 acgtttcgat catgtctcgg gtccagcaag gggcacgcga atcaagaaac aggttccctt
     1201 ctcggtctgc tccagggtca atgcaccctg atgggcatct tccacgacgc ggcgggagag
     1261 ggcgagtccg atcccccagc caccccgctt ggtcgtgatg cctggctcga acagggtgcg
     1321 ccggagctcc ttggcgatcc cgggcccatc atcgatcaca cggatcgcac ccatgccgtc
     1381 atcggcgctc acccgcagga taatcgcgcc cgggcgcccc tgcagcgcat cgatcgcatt
     1441 ctttaccagt gcctccagtg cccactcgag gagcaccgga tcgcccagca ccgtcgggcc
     1501 cgcaccgggg gcctcgaccc gaaggtcgat catgttggcg tgacgcggca gccggggacg
     1561 aaagtatccc gcaacccgat cagccagggc gcccaacccg atcggctcgc gcttggctgg
     1621 attgccgatc cgctcgaagc gctgggccac ccggtcgagc cgctccgcat cggccgagag
     1681 gtgatccgcc aagtcgggcg ggggtgttgc ccgggagcgg acccgctcga tccagccctg
     1741 gaggctggtg agcggggtgc ccatctgatg cgcggcctcc cgcgccatcg ccacccacag
     1801 ccggtcgcgc tgcgccgcca tcgcgctgcg ataggcgaag acggcaaccg ccaccatgac
     1861 cgcgatggtg agaccctgca acaccgccaa cgcaatcaga ttccgctggg ccggcaacgg
     1921 cccgtagtgt accgtgccga ctgcggcgtc gctgattggt gggttctgcc ggtccaggcg
     1981 agcggcgtag agcttcaccc gcggatcatc cagtggcgcc tcgaacggca gattggcggc
     2041 ggccgttacc cggccagtcc catcggtaac caccagcggg agtccgaggg accgcacctg
     2101 ctcgcccagt cgaagcagtg cttccgcctc cgcaccggga cgggggttgt tcagtccacc
     2161 aaaaaccccg gaatagagcc ggctggtggc ggtggcgtcg gcctggaagt ggcggaagat
     2221 gaggatcccc gtaccgaagc tcaaaccggc cagcagcgcc accagcgcga cgactatcct
     2281 gggcgccagg cgttgaagcc gctcgctacg cacgtggacg caagcggtcc acgccgaggt
     2341 acgggaccaa agcttcaggc acccgcaccg atccgtcggc cgcttggttg ttttccagca
     2401 gcgcgatgat ggtgcgcggg aaggcgacgc ccgaggcgtt gagggtatgc acgaactcgg
     2461 gcttggcctt gggcgaaggc cggtagcgga tgttcgcgcg gcgggcttga aagtcggtaa
     2521 acgtgctgga gctcgagacc tcaagccagt cgcccacgcc ggcggcccag acctcgatgt
     2581 catacgtgcg ggcgctggcg aagccggtat cgccggctgc aagctccacc acacggtagg
     2641 gtaacgccaa acgctggagg accgcctccg catgagtggt gatccgttca tgctccgctg
     2701 gcgactcttc cggccgcacg atgcggacga gctccacttt gtcgaactgg tggacccgga
     2761 tcagcccccg ggtatccttg ccatgggaaa aggcctcacg ccggaaacag ggggagtagg
     2821 ccacgtaggt cgccggcagc gcgctcgcct cgaggatctc gtcccggtga atattggtga
     2881 ccggcacctc agcggtggga atcaggaaca ggtcgtcacc gggagaggcg tagatttcct
     2941 cggcgaactt gggcagctga ccagtgcccg tgagcgacgg gcggttcacg aggtagggtg
     3001 gtgcgacctc aaggtaccca tgctccctgg tatggagatc gagcatgaat ccggcgagag
     3061 cgcggcccag cttggcgccg agtccggtga agaggggaaa accggacccg gtgatcttcg
     3121 cccccgcagg aagatcgaaa agcccgagtc cggccccgag gtcccaatgg ggtctgggag
     3181 tgaagtcgac ctttggcggg gtgccccagg tacgaagcac ccggtttgcc gcggcgtcgc
     3241 cgtcgggcga tccctcgtgc gggaaatttg gcaccgccag ggcacgctca tcgagggcgg
     3301 tttcgatctc gcgcagccga ccgtcgagcg acttcacctc gtcccccgag gccttgagcc
     3361 gctccatgag atcgtcaacc ggctccttgg cccgcttccg ccgggctact tcgtcgctgg
     3421 ctgcgttccg ctccgccttg agggtttcga cccggaccag cacatcgcgc cgctggcgat
     3481 cgagatcgag gaggtcatcc aggatggcgg ccaggccagc gtcgccgcgc cgcatcaggc
     3541 tggcgcggct cccagccgga tcctgccgga gacgcttgac gtcgatcacg ctcagttctg
     3601 gggcaggccg ggctcgagtc ctctgaaccc gcagttatcg tcgatcagta tccggaaggt
     3661 gacagtcttg accaactcat cgaagctcac gatctccagc ttg
//
LOCUS       DASYRV010000218         3219 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1744518, whole genome shotgun sequence.
ACCESSION   DASYRV010000218 DASYRV010000000
VERSION     DASYRV010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3219
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1744518"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..384
                     /locus_tag="VGQ24_05605"
     CDS             <1..384
                     /locus_tag="VGQ24_05605"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEV8454343.1"
                     /translation="LSLSELIEVHRGKTGGLIRAACAVGGMAAEAEAEALAGLTAFGE
                     DIGLAFQIADDVLDATGTSEELGKPAGRDAELKKSTYVVLCGIDGARREAERLAGRAV
                     SHLDRAGVPSGALGALAGYIVNRTS"
     gene            527..2422
                     /gene="dxs"
                     /locus_tag="VGQ24_05610"
     CDS             527..2422
                     /gene="dxs"
                     /locus_tag="VGQ24_05610"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: protein motif:HMM:NF003933.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEV8454344.1"
                     /translation="MSLLATIKSPEDLKRLRRDQLPDLAQEIRDRLIECCSITGGHIG
                     ASLGVVELSIALLYEFDSPADKIVWDVGHQAYAWKLLTGRNEPFPTLRQRSGISGFLK
                     RTESEHDQFGAGHAGTATSAALGMATARDLKGEQHKVVAVVGDGALTCGLSYEGMNNA
                     GHSERDIILIVNDNGMSISPNVGAISKMLGRIVADPRTNKLRERIKGMTFALGGVFGE
                     GLVDFARNVEESVKNLFSPGMLFEELGFRYFGPIDGHDLPKLCDTLRFVGGMDGPRVI
                     HVITQKGKGFSFAESNQEKWHGLAAYDPLTGEARKKSSGPPTWTQVFGAGLTALAGEH
                     PEMVAITAAMPSGTGTSVFQEKYPERFFDVGIAEGHAVTFAAGLAAQGIRPVCAIYST
                     FLQRAYDNVIHDVAVQRLPVIFAMDRAGLVGEDGQTHMGLYDLAYMLAVPGMTVTAPK
                     DGEELIGLLRTALAHDGPLSTRYPRDKAPAEPRPASEIPAVPYGTWEQLRRGKDVAIL
                     AVGTMVLPAVQAAELLAQDGIDCAVVNCRFLKPMDSAMLEALTQQHRTLVTVEEGTIV
                     NGFGAYLAETLQTTHPEVRVVALGVPDRLIDQAPRAEQLDTYGLTAAGIARRITALQH
                     EESLEAR"
     gene            2419..>3219
                     /locus_tag="VGQ24_05615"
     CDS             2419..>3219
                     /locus_tag="VGQ24_05615"
                     /inference="COORDINATES: protein motif:HMM:NF039482.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HEV8454345.1"
                     /translation="MKVGVVGNPRYGDLKGVLEHLAILAPDRGITLYSEPRLQPFWNR
                     EVPSFEGVGLDALLTFGGDGTLLRGARLLGARETPILGVNLGRVGFLTTATRESLDPA
                     LDALVAGQYEIERRQALRAAIRDPEGEVRATQMAVNDVAVHKGGVARVIRVNVFIQGE
                     NVGPYSADGIIVASPTGSTAYSLSAGGPIVVPGVEAMVVTPIAAHTLAVRALVVPATY
                     RIVIEPMAGWAEDLLVSFDGQTGTTLAPGESVDVCKADHRVCLIRLGGE"
BASE COUNT          553 a         1055 c         1069 g          542 t
ORIGIN      
        1 ctatcgctct ccgagctgat cgaggttcac cgggggaaga ccggcggctt gatccgcgct
       61 gcctgcgccg tggggggcat ggcggcggag gccgaggcgg aggccttagc tggcctcacc
      121 gcctttggag aagacatcgg actcgcgttc cagatcgccg atgacgtgct cgatgccacc
      181 ggtacgagcg aggagctagg caaacccgcc gggcgggatg ccgagctgaa gaaatccacg
      241 tacgtggttc tctgcggtat cgatggcgcc cggcgggagg ccgagcggct ggcggggagg
      301 gctgtttccc acctggaccg cgcaggcgtt ccgtcggggg cactgggggc cttggccgga
      361 tatattgtta ataggacgtc ctgagagtag tcgtgcgcag ctgacaccct ttatcctcat
      421 cccgagcgca gcgagggacc tagccagcgg gctctggaga tccgcgggta aggtccctcg
      481 gtcgcagcgc tccctcggga tgaggaaaac ctcagcccga accgccatgt ccttgctcgc
      541 tacgatcaag tcgcccgaag acctcaagcg cctccgccgc gaccagcttc ccgatctggc
      601 ccaggagatc cgcgaccgcc tgatcgagtg ctgctcgatc accggcggtc acatcggggc
      661 cagcctgggc gtggtcgagc tgagcatcgc cctcctttac gagttcgact cacccgccga
      721 caagatcgtc tgggacgtcg ggcatcaggc ctacgcctgg aagctcctca ccggacggaa
      781 cgagccattc cccaccctgc ggcaacgcag cgggatctcc ggcttcctca agcgtaccga
      841 aagcgagcac gatcagttcg gcgccgggca cgcaggcacc gccacatcgg ccgcgctcgg
      901 catggccacc gcgcgggatc tgaaaggcga gcagcacaag gtggtcgccg tcgtgggcga
      961 cggcgcgctc acctgcgggc tctcctacga ggggatgaac aacgcgggcc actccgagcg
     1021 cgacatcata ctgatcgtga acgacaacgg gatgtctatc tcgcccaatg tcggcgctat
     1081 cagcaagatg ctggggcgca tcgtggccga tccccggacc aacaagctcc gcgagcggat
     1141 caagggaatg acctttgccc tgggtggcgt cttcggcgag gggctggtgg acttcgcccg
     1201 taacgtagag gagagtgtca agaatctctt ctcgcccggg atgctgttcg aagagcttgg
     1261 attccgctat ttcggcccga tcgatggcca cgatctcccg aagctctgtg acacgctgag
     1321 gttcgtgggt ggcatggacg gaccccgggt gattcacgtc atcacccaaa aggggaaggg
     1381 attctccttt gcggagtcca accaggagaa gtggcacgga ctcgccgcgt acgacccact
     1441 gaccggtgag gctcgcaaga aatcgagcgg tcccccgacc tggacccagg tattcggagc
     1501 cggcctcacc gccctcgcgg gcgagcatcc cgagatggtg gcgatcactg ccgcaatgcc
     1561 ctcggggacc ggcaccagtg tgtttcagga gaaatacccc gagcgtttct tcgatgttgg
     1621 gatagccgaa ggccatgcgg tgaccttcgc cgcgggcctg gccgcccagg gtatccgtcc
     1681 ggtctgcgcg atctacagca cgttcctcca gcgggcctac gacaacgtca tccacgacgt
     1741 ggccgtgcag cgcctgccgg tgatctttgc catggaccgc gccggactcg tcggcgagga
     1801 cggccagacc cacatggggc tgtacgatct agcctatatg ctggccgtcc ccggcatgac
     1861 tgtgaccgca ccaaaggacg gcgaggagct gattgggctg ctccgcaccg cgctcgccca
     1921 tgacggcccg ctctccaccc gatatccccg ggacaaggca ccggctgagc ctcgtcccgc
     1981 atcggaaatt ccggcggtgc cgtacggcac ctgggagcag cttcgccggg gaaaggacgt
     2041 ggcgatcctg gctgtgggta caatggtgct ccccgcagtt caggcggccg agctcctggc
     2101 ccaggatggt atcgactgcg cggtggtgaa ctgccggttt ctcaagccga tggactcggc
     2161 gatgctcgag gccctgaccc agcagcaccg gacactggtg acggtcgagg aaggcaccat
     2221 cgtcaatgga ttcggcgcct acctggccga aacgctccag accacgcatc ccgaggtgcg
     2281 cgtcgttgcc cttggcgtgc ctgaccgtct catcgaccag gcgccccgtg cggaacagct
     2341 cgacacgtat gggctgaccg cggccggaat cgcacggcgc attacggcgt tgcagcacga
     2401 ggagagcctc gaggcccgat gaaggtcggc gtcgtcggca atccgcggta cggggacctc
     2461 aagggagtcc tggagcatct cgccattttg gcgccggatc gaggcatcac cctgtacagc
     2521 gagccccgcc tccagccgtt ctggaaccgg gaggttccct cgttcgaggg tgtcggtctc
     2581 gacgcgctgc tcaccttcgg aggggacggg acgctgctgc gaggggcccg cctgctcggc
     2641 gcgcgcgaga cgcctatcct cggtgtcaac ctgggccggg tcggatttct caccaccgcc
     2701 acccgcgaat ccctcgaccc tgccctcgat gccctggtgg ccggacagta cgagatcgaa
     2761 cggcgccagg cgctccgcgc ggccatccgg gaccccgagg gagaggtcag ggcgacccag
     2821 atggcggtca acgacgtcgc ggtgcacaaa ggcggtgtgg ctcgcgtcat ccgggtaaac
     2881 gtcttcattc agggcgagaa cgtcggcccc tatagcgccg acggtatcat cgtggcgtcg
     2941 cccaccggct ctacggcgta cagtctgagc gcgggcggtc cgatcgttgt accgggcgtc
     3001 gaggcgatgg tcgtcacccc gattgcagcg cacacgctcg ccgtacgcgc cctcgtcgtt
     3061 cccgctacgt atcgcatcgt gatcgagccg atggccggct gggctgagga tctgctggtc
     3121 tcgttcgatg gccagaccgg taccacgctc gcgccgggcg agagtgtaga cgtatgcaag
     3181 gccgatcacc gggtgtgcct catccgtctt ggcggagag
//
LOCUS       DASYRV010000219         2001 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_292384, whole genome shotgun sequence.
ACCESSION   DASYRV010000219 DASYRV010000000
VERSION     DASYRV010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2001
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_292384"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..559)
                     /locus_tag="VGQ24_05620"
     CDS             complement(<1..559)
                     /locus_tag="VGQ24_05620"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEV8454346.1"
                     /translation="MPAELTGRICVVTGANRGIGRATAEGLAALGASLALVCRRREDG
                     EAVSREIAAKGRPAPDVVRADLSSQASIRQAASEIQARYPRLHVLINNAGIISRRREV
                     TVDGLEMQFAVNHLAYFLLTNLLLLQLRAGAPSRIVNVSSGAHSHGTLDFADLQSEHG
                     YDPKEVYSRTKLANILFTYELARRLG"
     gene            complement(570..1406)
                     /locus_tag="VGQ24_05625"
     CDS             complement(570..1406)
                     /locus_tag="VGQ24_05625"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEV8454347.1"
                     /translation="MATPTLTKHSLPGSLGEILIDVRAGGRASTRPAVLVLHGFKGFK
                     DWGMFPPLSQRLAQAGFIVVSPNLSGSGVDDEGDFSLPERFSHNTFSAELEDVRRVID
                     ALVAGQLGVPTPSTLGLVGHSRGGGIAILQAARDPRVRTLVTWAAISSVERWPASQRS
                     SWRAAGRTDIQNARTGQVLPLYTDVLDDLEQNASALDIEAAGRRLRIPWLVIHGTEDE
                     SVPFAEAERLKAASTRPDTHLLPIEGGGHTFGAVHPWRSTTPELATVFDATLAWLTTR
                     LK"
     gene            complement(1428..>2001)
                     /locus_tag="VGQ24_05630"
     CDS             complement(1428..>2001)
                     /locus_tag="VGQ24_05630"
                     /inference="COORDINATES: protein motif:HMM:NF036772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HEV8454348.1"
                     /translation="VTFHGPVARASMPAFSREHFERVLTRAESPGRLGRLPGPAGVLV
                     PQEHRIVTLRGGTAEGPLAGGNLTLLQCLIGTPWFPDLTGAILFIEDEGEHLYRVDRA
                     LAHLRTIGALQRLAGIAVGRFTELVRAGRDGALGFDQVLATYFAPLNIPVACGFPIGH
                     IDAQWTMPLGVRARLDADAGEVELLEPAVA"
BASE COUNT          355 a          631 c          704 g          311 t
ORIGIN      
        1 ccccgagccg ccgggcgagc tcgtaggtaa acaggatatt cgccagcttg gtccggctgt
       61 agacctcctt gggatcgtaa ccgtgctcgg attgaaggtc cgcgaaatcg agggtgccgt
      121 gcgagtgggc gccggaggag acgttgacga tccgggacgg agctcccgcc cgaagttgga
      181 ggagcagcag attggtgagg agaaagtagg ccaggtggtt gacggcgaac tgcatctcga
      241 ggccatcgac ggtgacctcg cgccgccgcg atatgattcc agcgttgttg atcagcacgt
      301 gcagcctggg atatcgcgcc tggatctccg aggcagcctg cctgatggag gcctgcgacg
      361 aaaggtccgc gcgaacaacg tccggtgcgg gtcggccctt cgccgcgatc tcccgggata
      421 ccgcctcgcc gtcctcgcgg cggcggcaga ccagggccag actggcgccg agcgcggcca
      481 gaccctctgc agtggcgcgg ccgattcccc ggttggcccc ggtgaccaca catatccggc
      541 cggtcaactc ggcgggcatg gggaagccgc tacttcaagc gggtagtgag ccaggcgagc
      601 gtggcatcga acacggtagc gagctcggga gtggtggagc gccacggatg caccgcgccg
      661 aaggtgtgac ctccgccctc gatcggcagg agatgggtgt cgggccgcgt gctagccgcc
      721 ttcagccgct cggcttcggc aaagggcacc gactcgtcct cggtcccgtg gatcaccagc
      781 cagggtatcc ggagtcgccg gcccgcggcc tcgatatcga gtgccgatgc attctgctcg
      841 aggtcgtcga gaacgtcggt gtacagcggg agcacctgtc cggttctggc gttctgaatg
      901 tcggttcgcc ctgccgcgcg ccaggagctc cgctgggaag cgggccagcg ttcgacgctg
      961 gatatggcgg cccaggtgac cagtgtccga acccgtggat cccgcgcagc ctgaaggatc
     1021 gcgatcccac cgcctcggga atgcccgacg agcccgagag tggaaggtgt cgggacgccg
     1081 agctgacccg ccaccagggc atcgatgaca cggcgaacgt cctcgagctc cgcgctgaag
     1141 gtgttgtggc tgaaccgttc gggcagggag aagtctccct catcatcgac gccgctgccg
     1201 ctcaggttcg gactcacgac gatgaagccg gcctgcgcca gacgttggga tagcggagga
     1261 aacatccccc agtccttgaa tcccttgaag ccgtgtagga ccagaacggc aggccgggta
     1321 gacgctctgc caccggcgcg cacgtcaatc aggatctcgc cgagcgagcc gggcagagag
     1381 tgtttggtga gcgtgggtgt ggccatcctc aatggtaacc gtagcagtca ggctaccgcg
     1441 ggctcgagca gctcgacctc accagcatcg gcatcgagcc gggccctgac accgaggggc
     1501 atggtccact gcgcgtcgat gtgcccgatg gggaacccgc aggcgacggg tatgttcagc
     1561 ggcgcaaaat aggtggcgag gacctggtcg aatccgagcg caccatctcg ccctgcgcga
     1621 acgagctcgg tgaatcggcc gaccgcaatt ccagccaggc gctggagggc accgatggtg
     1681 cggagatggg cgagggcccg gtccacccgg tagaggtgct cgccttcgtc ttcaatgaag
     1741 aggatggcgc cagtgagatc ggggaaccac ggcgtgccga tcagacactg aaggagggtg
     1801 aggttgcccc ccgccagtgg gccctcggcg gttccacctc gcaacgtgac gatacggtgc
     1861 tcctgcggaa ccagcacgcc ggccggtccc ggcagacggc ccagccggcc gggcgattcg
     1921 gctcgagtga ggacccgctc aaagtgctcg cggctgaacg ccggcatact ggcccgagct
     1981 accggtccgt gaaaggtcac c
//
LOCUS       DASYRV010000220         3163 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2328004, whole genome shotgun sequence.
ACCESSION   DASYRV010000220 DASYRV010000000
VERSION     DASYRV010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3163
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2328004"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..301
                     /locus_tag="VGQ24_05635"
     CDS             <1..301
                     /locus_tag="VGQ24_05635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454349.1"
                     /translation="RNDSPGRTLTLSAKPSMACSGPGSPSCHPAVPGSAFSAAVVFAP
                     GSCRDERRASGLDLEGARVPEPTLAPGRAIHAADPETIITTASHVHNRCIDHHPR"
     gene            complement(363..1175)
                     /locus_tag="VGQ24_05640"
     CDS             complement(363..1175)
                     /locus_tag="VGQ24_05640"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEV8454350.1"
                     /translation="MSEGFVEVDGGRLFYEEAGSGQPVVFIHPGLWDRRTWDDQFPVF
                     AEQFRAIRYDVRGYGKSSKPEREYSNVEDLRALLEQLGVDRAALIGCSMGGGIAIDFA
                     VEHPELVWALVPVAAAVSGVEETDEERETWAPVVGRIMEAAGAGDLDRAVDLLMEIWA
                     PLGTGDHSGERIRQIALENPWAITDEGKLAREIDPPALPRLSTIRASTLIVLGAQDLQ
                     DVNQMWSEYGPRFPASRTVVLDGADHVVNMRQPEEFNRLVLEFLGSAHDRSQ"
     gene            1424..>3163
                     /locus_tag="VGQ24_05645"
     CDS             1424..>3163
                     /locus_tag="VGQ24_05645"
                     /inference="COORDINATES: protein motif:HMM:NF012961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 9 protein"
                     /protein_id="HEV8454351.1"
                     /translation="MSRVMGRRVAARLASIALLALAGTALISLEPTASAPAAASAFVR
                     VNQVGYPSDASKRAYLMSSAAETGATFTVKNQAGAIFSGTVGANLGKWSNSFPNVYPL
                     DFDMVTAAGSYSISVSGPVAASSPTFRIDTGGAVYSGALANALSFYQTERDGPNYIAS
                     ALRTAPAHLNDRTAMTYQTPNVNSSGRFSGDLTPLGTTIDASGGWWDAGDYIKGVQTL
                     GYATAMLLTGVRDFPAQMGAGSAGSNFTAEAKFGTDWLLRMWDDSTRTFYHQVGIGTG
                     NAKTVGDHDLWRLPQADDIFGGTGPLYRYIRNRPVFRAGPPGSLISPNLAGRSAAVFG
                     LCFQLFKTSDPPFANRCLLAGQHIFDLANTAPTGNLTTYIPFSFYPETEWRSDLELGA
                     AELYFAVAGGGLPAGLPHTDPLFYLQQASHWANQYIASPEAGADTLNLYDVSGLAHYD
                     LHRAIGQAGNPPGLEVTQAALLADMKKALDGALAQAATDPFGFGFPWATWDTTSHGTG
                     LSVMASEYDELTGGTTYADVSTRWLNNVLGANAWGSSFIIGNGTTFPHCPHHQVANIV
                     GSLDGTPPVLNGAA"
BASE COUNT          573 a         1113 c          956 g          521 t
ORIGIN      
        1 ccggaacgac tcgccgggaa ggacgctcac cctgtccgca aagccctcga tggcgtgctc
       61 agggccggga tcacccagct gccatccagc ggtccccggg agtgcgtttt cggccgctgt
      121 cgtatttgcg cccggctctt gtagggatga gcggcgggcg agtggactcg acctcgaggg
      181 cgcccgagtg cccgagccca ccctcgcgcc cggtcgggcc atacacgccg ccgatcccga
      241 gaccatcatc actacggcga gccacgtaca caaccggtgc atcgatcacc acccccgctg
      301 atgggaggcc gtacgcacgg caggaagtgt gaggccacgt cccgcaggga tgatggtaag
      361 actcactgcg accggtcatg ggcgctgccg aggaactcga ggacgagccg attgaattct
      421 tcgggttggc gcatgttcac cacatgatcg gcgccgtcga ggacgaccgt tcgtgacgct
      481 gggaagcgtg gcccgtattc gctccacatc tgattgacgt cctggagatc ctgcgcgccg
      541 agcacgatga gagtggaagc gcggatcgtg gacagtcgcg gcagggcagg tggatcgatc
      601 tccctggcga gcttcccctc atcggtgatt gcccacgggt tctccagcgc aatctgccga
      661 atccgctcac cgctgtggtc cccagtgccg agcggggccc agatctccat gagcaagtcc
      721 acggcgcgat cgaggtcgcc cgcgcccgct gcctccatga tccgtccaac gaccggcgcc
      781 cacgtctcac gttcctcgtc ggtctcctcc acgccggaaa cagcggcagc gaccggaacg
      841 agagcccaca ccagttccgg gtgctcgacg gcgaagtcga tcgcgatccc gccgcccatc
      901 gagcacccga tgagggcagc acggtcaacc ccgagctgtt cgagcaacgc acgaagatcc
      961 tcgacattcg agtactctcg ctcgggtttc gaggacttgc cataaccccg cacgtcgtag
     1021 cgaatcgccc ggaattgctc agcaaacacg gggaactggt cgtcccaggt tcgccggtcc
     1081 catagccccg gatggatgaa aacaaccggt tggccagagc cagcttcctc gtagaagagc
     1141 cgtccgccgt cgacctcgac gaatccctca gacatcccga ctccctcctt cctcgagcgt
     1201 ctcagatgac ccctgaggat gcggccaccc acacggcgcg ccgcgataac cgaaacgggc
     1261 ggcgcggtcg tcccactcgg ggccgcggag cgtggctgac ttgatgcgac gaaagatcag
     1321 caccacctct tgaccgcgtg gaacggccgg agtaaacaat ccttacgcga agtaaacaat
     1381 ccttactcaa tccagtgggg gacggcaccg acgagggaga gccatgtccc gtgtcatggg
     1441 tcgcagagtt gccgcgcgcc tggcgtcgat cgcccttctg gcgcttgcag gcaccgcgtt
     1501 gatctcgtta gagcccacag ccagcgcgcc cgcggcggcc agcgcgtttg tccgggtgaa
     1561 tcaggttggt tatccgtcgg acgcgtccaa gcgcgcctac ttgatgtcca gtgcagccga
     1621 gactggcgcc acgttcaccg tcaagaacca ggccggggcg atattctccg gcacggtcgg
     1681 ggcgaatctc ggcaagtgga gcaacagctt cccgaacgtg tacccgctcg acttcgatat
     1741 ggtcaccgcg gccggaagct attcgatctc ggtctccgga cccgtagccg cctcctcccc
     1801 caccttccgg atcgacaccg gcggcgccgt gtactcaggg gcactggcga atgcgctctc
     1861 cttttatcag accgaacgag acggcccgaa ctacatcgcc tccgcgctgc gcaccgcgcc
     1921 cgcccatctc aacgaccgga ccgccatgac gtaccaaacc ccgaatgtga acagcagcgg
     1981 gcgcttctcc ggcgatctga caccgctggg gacgacgatt gacgcgtccg gcggttggtg
     2041 ggacgcaggc gactacatca agggcgtaca gacgctcggc tacgcgacgg ccatgctgct
     2101 caccggcgtt cgtgacttcc ccgcccagat gggagcgggc tcggcgggat ccaacttcac
     2161 cgcggaggcg aagttcggta cggactggct gctccggatg tgggacgact ccacccggac
     2221 cttctatcac caggtgggca tcgggaccgg gaatgcgaag acggtcggcg accacgacct
     2281 ttggcggctc ccgcaggctg acgacatctt cggcggtacc ggtccgctct atcgctacat
     2341 caggaaccgc ccggtcttcc gtgccggacc tcccggctcg ctcatcagcc cgaacctcgc
     2401 cggacggtcg gccgccgtgt tcggcctgtg cttccagctc ttcaagacca gcgatccgcc
     2461 cttcgccaac aggtgcttgc tcgccggcca gcacatcttc gatcttgcca ataccgcacc
     2521 aaccggcaac ctgacgacgt acatcccgtt cagcttctat ccagagacgg aatggcgcag
     2581 cgacctcgag ctcggcgccg cggagctcta cttcgccgtc gcaggcggcg gactgcccgc
     2641 cgggctgccg cacaccgacc cgctcttcta cttgcagcag gcatcccatt gggcgaacca
     2701 atacatcgcg agccccgaag ccggggccga cactctcaac ctctatgacg tgagcgggct
     2761 cgctcactat gaccttcacc gagccatcgg ccaggctggg aacccacccg gcttggaggt
     2821 aacccaggcc gccttgctcg ccgacatgaa gaaggcgttg gatggcgcgc ttgcccaggc
     2881 agccaccgac ccgttcggct tcggcttccc ctgggcgacc tgggatacga cctcgcacgg
     2941 caccgggctt tcggtcatgg cgagcgagta tgacgagctc accggaggca ccacgtatgc
     3001 ggacgtcagc acgaggtggc tgaacaacgt cctcggcgcc aatgcctggg gctcctcgtt
     3061 catcatcggc aacggcacca cattcccgca ctgtccgcac caccaggtgg cgaacatcgt
     3121 cggatccctc gacggcaccc cgcccgtgct gaacggtgcg gcg
//
LOCUS       DASYRV010000221         5084 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1081286, whole genome shotgun sequence.
ACCESSION   DASYRV010000221 DASYRV010000000
VERSION     DASYRV010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5084
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1081286"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1430
                     /locus_tag="VGQ24_05650"
     CDS             <1..1430
                     /locus_tag="VGQ24_05650"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEV8454352.1"
                     /translation="AIWVGTYGQGIYRLPLGATAWQSIRHDSTSTSISQDFVQALAFG
                     SRGEVWYGTIGNGWGLSTDGGATWKNWTLAQLGPEWQYVTPSGIVVRGDTTVIGTADG
                     LQVTTNNGGSWTAIGDAVGTRARGPADTVFPILSSEYVRRVAADRRGWTVATLRGNQR
                     LRRTESGWEAQPLTAAAFPPANALLIGRQLIRGTPCGLRPVSDTLPCLRQAGAPADPP
                     RAPLTTWFRRPIAVRDNSFIDQTYRYGSTMGGNFQQHQGVEFNNPDGTPVYAIGAGTV
                     VYAGRAEQGALTVTIRHDTTVSAHGRRYRIFSTYYHNSALKVRLGQKVRRGTLISLVG
                     HTGRATNDHLHLEISAAPGDSLSLVVDSLQRFPPYTTNPELWIEPLAETGIVAGQVFD
                     AAGAPVPQARIYGIIKREPVETPFSYAETYGDKAHPHPLYGEHFAVSDVPEGTYTVGT
                     EIEGKKVFRQVTVEAGKLTWVVFKP"
     gene            1459..2094
                     /locus_tag="VGQ24_05655"
     CDS             1459..2094
                     /locus_tag="VGQ24_05655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454353.1"
                     /translation="MRTTDSRLATRDSPIMFIELTDHLRCPSDHDESFLVLLPDRVEG
                     RSVIEGQLGCPVCGRTFELSAGVLDTGDVPDHGASPASSLDAEALTALVGLSGPGGYL
                     ALVGGVADSWKEIAALNPGVALVAVNPGPEVTDAPGISVLRSGRIPLKSRSMRGVVLG
                     QPFAGSPHWVAEAARVVLPGLRVVGAGADPPPELIDLLASAEGVWVGTGKR"
     gene            complement(2122..4026)
                     /locus_tag="VGQ24_05660"
     CDS             complement(2122..4026)
                     /locus_tag="VGQ24_05660"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HEV8454354.1"
                     /translation="MPLNQIPLSSWYRPSAPAERPFPAPDSGSSSSFSKAAGTPRTLN
                     ELYFGTLERFGSRPVAVRAKRSGEWFALSYRELADRVQDLSLGLAELGIQPGDRVAIL
                     SENRPEWAIADYACLTARCTDVPIYPTLPSKQAEHNLRDSGATAVFVSSRQHMEKVLA
                     AKERLPALRHVIAFDDDARGPGVLSLDQVYACGRSARTHRTTWQADALKVRPEDLATL
                     IYTSGTTGEMKGVMLTHGNIASNVTTCCGLFTFGPDDECLSFLPLSHIFERMFGHYSM
                     FHSGVLINYAENVDTVAADMQRWRPTLMASVPRLYEKIYGRVLDQVRAGSRLRQRIFF
                     WAKRVGEASVERRMANRRLSPALAVKRLLADRVVFAKLRARTGGRVRFFISGGAPLSA
                     DIAKFFHAAGMPILEGYGLTETSPVIAVNTFQHARLGTVGRPIPGVEVKIAPDGEVLT
                     RGPHVMAGYYQKPQATADALDPEGWFHTGDIGLLDEAGFLRITDRKKDIIVTAGGKNI
                     APQPIESLAKTNKFVSNAVMLGDRRRFPIMLVVPNVQTLTAWAAQQGIQANDAAGLLA
                     IPEVQQKVEREVRATLRDLASFEVPKKLLLLPSDFSVESGELTPTLKIKRRVVEERHS
                     KAIEALYGGA"
     gene            complement(3923..4609)
                     /locus_tag="VGQ24_05665"
     CDS             complement(3923..4609)
                     /locus_tag="VGQ24_05665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454355.1"
                     /translation="MRRWALLLSSVVLQGCSNLTEGAGGVVGFEIQAPSLKTIEVGET
                     LQLSVVALDKDGNPVDAPVTWRAPDTTLTVDGAGAITGVFPGTGHVQAFTGSLASELV
                     TFTVIARADTLLITGDSVITVPTGVTASAPLLTQLRSFSPDGPLPSRPVVYAVTSPPD
                     VGPHTVELPGAVLADTVLTGTDGAVSSVTLNRVIGATQPDTAIVVVQAFRTRGAAVPG
                     SGQRFIILFQ"
     gene            complement(4606..>5084)
                     /locus_tag="VGQ24_05670"
     CDS             complement(4606..>5084)
                     /locus_tag="VGQ24_05670"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEV8454356.1"
                     /translation="VRLCSETPAPTMSFWRRMFGKGSRENLNPQRLDYLNEGLALERQ
                     GDFEAALTSYRLAFRDNPADSRILLNMAIAFTKTGQPEEAIRHYKRALELDDSLGGAH
                     YGVAFLLLKRGDVQQAAEHLRAFLARPPKGPDAERWVRHAESALREIARTPAPGTL"
BASE COUNT          869 a         1642 c         1729 g          844 t
ORIGIN      
        1 gcgccatctg ggtcggcacc tacggccagg ggatctaccg cctgccgctg ggggcgacgg
       61 cctggcaatc aattcgccac gacagcacga gcacgtccat ctcccaggac tttgtccagg
      121 ctctggcctt cggctctcgc ggggaggtgt ggtacggaac gataggaaat ggctggggcc
      181 tctcgaccga tggcggcgct acctggaaga actggaccct cgctcagctc gggcccgagt
      241 ggcagtacgt gacgccctcc ggcatcgtgg ttcggggcga caccaccgtg atcggaaccg
      301 ccgacggcct gcaggtgacc accaacaacg gcggcagctg gacggcgatc ggcgacgctg
      361 tcggtacccg ggcgcgcggg ccggccgaca cggtgtttcc gatcctctcg agtgagtacg
      421 tccgccgggt cgcggccgac cggcgcggct ggacggtcgc aacccttcgg ggcaaccagc
      481 ggctccgtcg aaccgagagc gggtgggagg ctcagccact gaccgcggcc gcattccctc
      541 ccgccaacgc cctgctgatc ggccggcagc tgattcgggg gaccccctgc ggactccggc
      601 cggtcagtga tacgttgccc tgcctacggc aggcaggtgc tccggccgac ccgccccgcg
      661 ctccgcttac cacctggttc cgccgcccca ttgccgtgcg cgacaacagc ttcatcgatc
      721 agacgtaccg ctacggctcg acgatgggcg gcaacttcca gcaacatcag ggcgtggaat
      781 tcaacaaccc ggatggaacg ccggtgtacg ccatcggggc cggcaccgtg gtctatgccg
      841 gtcgggcgga gcagggcgcc ctgaccgtga ctatccggca cgatactacc gtgagcgcgc
      901 acggccgccg ctaccggatc ttctcgacct attaccacaa ctccgccctc aaggtcagac
      961 tgggccagaa agtgcggcgg ggcacgctga tctcgctggt gggacacacc ggccgggcaa
     1021 ccaacgacca tcttcacctc gagatttcgg ccgcgcccgg tgactcgctg agtctggtag
     1081 tagactcgtt acagcgcttc cctccataca cgaccaaccc cgagctctgg atcgagccgc
     1141 tggccgaaac gggaatcgtg gcgggtcagg tattcgacgc cgccggtgcg ccagtgccac
     1201 aagcgcgaat ctacgggatc atcaagcgtg agccggtgga gacgcccttc tcctatgcgg
     1261 agacctatgg cgacaaggcc cacccgcacc cgctctacgg ggaacacttt gccgtgagcg
     1321 acgtaccgga gggcacctac acggtgggca ccgagatcga gggaaagaag gtgtttcggc
     1381 aggtgacggt cgaggcgggg aagttgacct gggtggtgtt taaaccgtag tcgagagtca
     1441 cgagtcacga gtcacggaat gaggactact gactcgcgac tcgcgactcg cgactctccc
     1501 atcatgttca tcgagctcac cgatcacctc cgctgtccct cagaccacga tgaaagtttc
     1561 ctggtgttgc ttcccgatcg cgtcgagggc cgctcggtca tcgagggcca gctcggctgc
     1621 ccggtgtgtg gccggacctt tgagctttcg gccggggtgc tcgacaccgg agatgtgccg
     1681 gatcacggcg catctcctgc gagctcgctc gatgccgagg cgctgaccgc gctcgtgggc
     1741 ctgtcgggac cgggaggtta tctcgccctg gtgggcggcg tcgccgactc gtggaaggag
     1801 attgccgcgc tgaatccggg ggtagcactc gtagcagtga acccgggacc cgaggtcacc
     1861 gatgcgcccg gcatcagtgt gctgcggagc gggagaattc ccctgaaatc gcgctcgatg
     1921 cgtggagttg tgctggggca gcccttcgcc gggagccctc actgggtggc cgaggccgcg
     1981 cgtgtcgtgc ttccgggtct tcgcgtggtt ggggcgggcg ctgatccgcc acccgagctg
     2041 atcgatctac tagccagcgc ggagggagtg tgggtgggga cgggaaaacg gtgagcggtg
     2101 agaggtgaga ggtgagaccg cttacgcccc gccgtaaagc gcctcaatcg ctttgctgtg
     2161 ccgctcctcc accacccgtc gcttgatctt cagggtgggc gtgagctctc cgctctctac
     2221 gctgaagtcg ctgggcagca agaggagctt cttgggcacc tcgaagctcg cgaggtcccg
     2281 aagggtggcc ctgacctccc gctccacctt ctgttgcacc tctggaatcg ccagcagacc
     2341 cgcggcgtca ttagcctgga ttccttgctg cgccgcccag gcggtcaacg tctgcacgtt
     2401 gggaacgacg agcatgatgg ggaagcgccg gcggtcaccc agcatcaccg cgttggagac
     2461 aaacttgttc gtcttggcca ggctctcgat cggttgcggg gcgatgttct tgccgccggc
     2521 cgtcacgatg atgtccttct tgcgatcggt gatgcgaagg aagcccgcct cgtcgagcag
     2581 gccgatgtcc ccggtgtgga accagccttc ggggtcgagc gcgtcggcgg tggcctgcgg
     2641 cttctggtag tagccggcca tgacatgggg tcctcgggtg aggacctctc cgtcaggcgc
     2701 gatcttgacc tcgaccccgg gaatcggccg tcccacggtg ccgagtctgg cgtgctgaaa
     2761 ggtgttcacc gcgatcacgg gtgaggtctc ggtcagcccg tagccctcga ggataggcat
     2821 gccggccgca tggaagaatt tcgcgatgtc ggccgacagc ggcgctccgc ccgagatgaa
     2881 gaaccgaacc cggccaccgg tccgtgcccg cagcttggca aagaccaccc ggtcggccag
     2941 caatcgcttc acggccaggg cgggtgagag gcgtcggttg gccatgcggc gctccaccga
     3001 ggcttcaccg acccgcttgg cccagaagaa aatccgttgc cggagccggg acccggcccg
     3061 aacctgatcc agcacccgcc cgtaaatctt ctcatagagc cgcgggaccg aagccatgag
     3121 tgttggacgc cagcgctgca tgtccgccgc gacagtgtcc acgttttccg cgtagttgat
     3181 cagcaccccc gagtgaaaca tcgagtagtg gccgaacatc cgctcgaaga tgtgggagag
     3241 cgggaggaac gacaggcact catcgtccgg gccgaaggtg aacaggccgc agcaggtcgt
     3301 cacattcgag gcgatgttgc cgtgggtgag catcaccccc ttcatctcgc cggtggtgcc
     3361 ggaggtgtag atcagcgtcg ccaggtcttc cggcctgact ttgagagcat cggcctgcca
     3421 ggtcgtccgg tgagtcctgg cggagcggcc gcaggcgtag acctggtcca ggctgagcac
     3481 acccggtccg cgggcatcgt cgtcgaacgc gatcacgtga cggagcgcgg gaagccgctc
     3541 tttcgccgcg agcaccttct ccatgtgttg gcgcgaagaa acgaagaccg cggtggcgcc
     3601 cgagtcgcgc aggttgtgct cggcctgctt ggatggaagc gtcggataga tcgggacatc
     3661 ggtgcagcgc gcggtcaggc acgcgtaatc ggcgatggcc cactctggcc ggttctccga
     3721 tagtatcgcg acccggtcac ccggctgaat acccagctcg gccaggccga gactcaggtc
     3781 ctgcacccgg tccgccagct cgcgatagct caaggcgaac cactcgcccg agcgcttcgc
     3841 ccggacggcc acgggccgcg agccgaatcg ctccagcgtt ccgaaataga gctcgttcag
     3901 cgtccggggc gtgccagccg ccttactgaa agaggatgat gaaccgctgt ccggagccgg
     3961 gaacggccgc tccgcgggtg cggaaggcct gtaccacgac gatagcggta tctggttgag
     4021 tggcaccaat gactcgattg agggtcaccg aggagacagc accatccgtg ccagtcagaa
     4081 ccgtatcggc cagcacggcg ccaggcagct cgacggtgtg gggccccaca tccggcggtg
     4141 aggtcacggc gtagaccacc gggcgggagg ggagggggcc gtccggggag aagctccgca
     4201 gctgggtcag gagcggggca gaggcggtga cgccggtcgg gacggtgatg accgaatcgc
     4261 ccgtgatcaa cagcgtatcg gcccgggcga tcacggtgaa tgtcaccaac tcggaggcga
     4321 gcgagccggt gaaggcctgg acgtgaccgg tgccggggaa gacgccggtg attgcgccgg
     4381 cgccgtcgac ggtcagcgtc gtgtccggcg cccgccaggt gaccggcgca tccaccgggt
     4441 tgccgtcttt gtcgagagcc acaacggaga gttgaagggt ctcaccgacc tcgatcgtct
     4501 tgagagacgg ggcctggatt tcgaacccca cgaccccgcc cgctccctcc gtgagattgc
     4561 tgcagccctg caacacgacc gatgagagga ggagcgccca acgcctcaca gcgtccccgg
     4621 tgccggggtg cgggcgatct cgcgcaatgc actctccgcg tggcgcaccc agcgttccgc
     4681 gtcgggcccc ttcggcgggc gggcgagaaa ggcacgcagg tgctccgccg cctgctgcac
     4741 gtcgccccgt ttcagcagca gaaaagccac gccgtagtgt gccccaccga ggctgtcgtc
     4801 cagctcgagc gcacgcttgt aatggcgaat agcttcctcc ggctggccgg tcttggtgaa
     4861 ggcaatggcc atgttgagca ggatgcgcga gtccgccggg ttgtcccgaa aggcgagccg
     4921 gtaagacgtg agcgccgcct cgaagtcgcc ctggcgctcg agcgcgaggc cctcgttgag
     4981 atagtcgagc cgctggggat tcaggttctc ccgagatccc ttaccgaaca tgcgtcgcca
     5041 gaagctcatg gtgggagcag gggtctccga gcaaagtcga acgg
//
LOCUS       DASYRV010000222         3650 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3614332, whole genome shotgun sequence.
ACCESSION   DASYRV010000222 DASYRV010000000
VERSION     DASYRV010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3650
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3614332"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..707
                     /gene="hisIE"
                     /locus_tag="VGQ24_05675"
     CDS             <1..707
                     /gene="hisIE"
                     /locus_tag="VGQ24_05675"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HEV8454357.1"
                     /translation="AMGFDNLTSCRYLLSVSENIRLSTVKFGADGLVPVVTQESRSGD
                     VLMVAYANREALDRTLSTGLAHYFSRSRGRLWQKGETSGHVQRITEVRLDCDGDAVLY
                     RVDQTGPACHTGTRTCFSTVIGRTGGLADSLAEEDPGGHVLSRLARTVASRAALRPEG
                     SYTAQLLAGGVAKISQKVGEEAVEIVVAANSEDDERLASEAADFLYHLLVLLQARGVP
                     LDAVWKELERREKRER"
     gene            731..>3650
                     /gene="dnaE"
                     /locus_tag="VGQ24_05680"
     CDS             731..>3650
                     /gene="dnaE"
                     /locus_tag="VGQ24_05680"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF004226.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEV8454358.1"
                     /translation="MAFVHLHTHSEYSLLDGANRIPELVAHVKKLGMDSLAVTDHGNM
                     HAAWTFYEHAKAQRIRPILGFEAYLAFDSRHSREKPQWAPAPYSHLVLLARNRTGYKN
                     LVRLTSIGYTEGFYRRPRIDKEVLAAHSEGIVCLAACLSGEVALYLRQGKYEEARKSA
                     EWFSRTFGPDGFWLEIQHHGIPEERPVAEGMLRLGRELGIGVVATNDAHYLRREDAES
                     HDVLLAIATGSDLDDPKRFRFLGQESYVKSEAEMQALFPDQPETLANTATVAELCEFD
                     FEKRYFLPSFPRPREYASDEALLDHLATAGAERRYGSPLPPPVSERLAYELGVIEKAG
                     YAGYFLIVQDFIAAARERGIPVGPGRGSVAGSLVAYSLGITNVCPLKFDLLFERFLNP
                     ARVSMPDIDVDFCFERRGEVIEYVRERYGRESVGQIVTFGTMKARAAVKDVARVLRIP
                     PGEADKITKLIPSGPAYSLTIENAVKKVDEMRDLVRGNPLYQRLVTLSSRIEGISRHM
                     SVHAAGVVIAPGPLSEYVPVCTASTRGAGASTEGEDAIITQYEMGALEKVGMLKMDML
                     GLKTLTVIHDAVNMIGARHGSAPHMDTLELDDPKVYELLRHGRTAGVFQFESPLATDT
                     LRAMKCDRFDDLVASNALLRPGPLDAGMHTVFIRRKLGQEKVTYPHPSLKEILEPTYG
                     VITYQEQVMRIANVLAGFTLAEADVLRKAVGKKDAELIKKELGKFCERAVALGHPKRL
                     VDDLAAQIETFGRYGFNKSHAVAYSILSYQTAWLKAHHPAEFMAALLSSEIGNTDKVV
                     QYINEARELDLEILPPDVNESGFKFTVVGDRRIRFGLGAIRNVGEGAIESIITGREQG
                     PYHTVKELVERIDLRLCNKRVLESLVAAGACDSLGGHRKQFIEALEPALAEAQLLQAE
                     REAGQGSLFGEVGKDRKNGKDGTGHEGTSFLPALADLPDIPAWTEAERLAKEKEVLGF
                     F"
BASE COUNT          674 a         1142 c         1212 g          622 t
ORIGIN      
        1 cggcaatggg ttttgacaat ctcaccagct gccggtacct tctctccgtg tccgaaaaca
       61 ttcggctgtc gacggtcaag ttcggtgctg acggactggt gccggtcgtg acccaggaga
      121 gccgctccgg tgatgttctg atggtcgcct acgccaaccg ggaagcgctg gatcgcactc
      181 tctccaccgg tctggcccat tacttcagcc gatctcgcgg caggttgtgg cagaagggag
      241 agacgtcggg gcatgtccag cgcatcacgg aggtgcggct ggactgcgac ggggacgcgg
      301 tgctgtaccg cgtcgaccag accggccccg cctgccacac cggaacgcgc acctgcttct
      361 ccacggtcat cgggcggacg ggcggactgg cggacagtct ggccgaagaa gacccgggtg
      421 ggcacgttct gagccgcctg gcacgaaccg tagcatcgcg agcggctctg cgaccggagg
      481 gctcgtatac tgcccagctg ctggccgggg gcgtagctaa aatctcgcag aaggtcggcg
      541 aggaagcggt cgagattgta gtggcggcaa attcggagga tgacgagcgt ctcgcgtccg
      601 aggcggccga tttcctctat catctcttgg tgctcctgca ggcccgcggc gtcccgctgg
      661 atgccgtgtg gaaggagctg gaacggagag agaagcgtga acggtgaaca ctgttcacgc
      721 tgttcataca atggctttcg tccatctcca tacccatagc gaatactcac tgctcgacgg
      781 ggccaaccgg atcccggagc tcgtcgcgca cgtcaagaag ctcggcatgg acagcctggc
      841 cgtcaccgac cacggcaaca tgcacgcggc gtggaccttc tacgagcacg ccaaggcgca
      901 gcggatccgc ccgattctcg gcttcgaggc gtatctcgcc ttcgactcgc ggcattcgcg
      961 ggaaaagccg cagtgggcgc ctgcccccta tagccacctg gtgctgttgg cccggaatcg
     1021 taccggttac aagaacctgg ttcggctcac ctcgattggt tataccgaag ggttctaccg
     1081 caggccccgg atcgacaagg aggtgctcgc ggcccactcg gaggggatcg tgtgcctggc
     1141 cgcgtgtctc tcgggagaag tcgcgctcta cctgcgccag ggtaagtacg aagaggcccg
     1201 gaagagcgcg gagtggttca gccggacgtt cggcccagac ggcttctggc tggaaatcca
     1261 gcaccacggt attccggagg agcggccggt cgccgaaggc atgcttcgcc tgggccggga
     1321 gctcggtatc ggcgtggttg ccaccaacga cgcgcactac ctgcgccgtg aggacgccga
     1381 gtcgcacgac gtgctcctcg ccatcgctac gggcagtgac ctggacgacc cgaagcgctt
     1441 ccgcttcctc ggacaagaat cgtatgtcaa gtccgaagcc gagatgcagg ccctctttcc
     1501 cgaccagccc gagaccctgg ccaacaccgc caccgtggcg gagctctgcg agttcgactt
     1561 cgagaagcgg tatttcctgc ccagctttcc ccggccccgc gaatacgcgt ccgacgaagc
     1621 gctgctggat catctcgcca ctgccggcgc tgagcggcgc tacggatcgc cgctgccacc
     1681 gccggtgagc gagcggctgg catacgagct cggcgtcatc gagaaggccg gatacgccgg
     1741 ctatttcctc atcgtccagg atttcattgc tgcggccagg gagcggggca tcccggtagg
     1801 gccgggacgc gggtcggtcg cgggctcgct cgtggcctac tcactcggca tcaccaacgt
     1861 ctgcccgctc aagtttgacc tcctcttcga gcggtttctc aacccggcac gcgtgtccat
     1921 gccggacatc gacgtggact tctgcttcga gcggcggggc gaggtgatcg agtacgtacg
     1981 ggagcggtac ggccgggaga gcgtcggaca gatcgtcacc ttcgggacca tgaaggcccg
     2041 ggcggcggtg aaggatgtcg cccgcgtgct ccggataccg ccgggagagg cggacaagat
     2101 caccaagctg atcccgtcgg gtccggccta cagccttacc atcgagaatg cggtcaagaa
     2161 ggtggacgag atgcgggatc tggtccgggg aaacccactg taccagcgtc tggtcaccct
     2221 gagctcgaga atcgagggga tctcgcgcca catgtcggtg cacgcggcgg gagtggtgat
     2281 cgcgccgggg ccgctgtccg aatacgtgcc ggtctgcacc gcgtcgacca ggggtgccgg
     2341 cgcatccacc gaaggcgaag acgcgatcat cacccagtac gagatgggcg ccctggaaaa
     2401 ggtcggtatg ctcaagatgg acatgctggg cctcaagacg ctcaccgtca ttcacgacgc
     2461 ggtgaacatg atcggcgcgc gacacgggtc cgcgccgcac atggacacgc tggagctgga
     2521 cgatcccaag gtgtacgagc tcctgcgtca cggcagaacc gccggcgtct tccagttcga
     2581 atcaccgctg gccaccgata cgctcagggc catgaagtgc gaccggttcg acgacctggt
     2641 cgcctccaac gcgctcctcc gccccggccc gctggacgcg ggcatgcaca ccgtgttcat
     2701 tcggcgaaaa ctggggcagg agaaggtcac ctacccccat ccctcactca aggagatcct
     2761 ggagccgacc tacggcgtca tcacctacca ggagcaggtg atgcgaatcg ccaacgtgct
     2821 ggccgggttc actctggccg aagccgacgt gctgcggaag gcggtaggaa agaaggacgc
     2881 cgagttgatc aagaaggagc ttggcaagtt ctgcgagcgc gcggtggcgc tggggcatcc
     2941 gaagcggttg gtggacgacc tggcagccca gatcgagacc ttcggccgct acgggttcaa
     3001 caagtcgcac gccgttgcct actcgatcct ctcctaccag acggcgtggc tcaaggcgca
     3061 ccatcccgcc gagttcatgg cggcgctgtt gtcctctgaa atcggcaata ccgataaggt
     3121 ggtccagtac atcaacgagg ctcgcgagct cgatctcgag atcctgccgc ccgatgtgaa
     3181 cgagtcgggc ttcaagttca cggtggtggg agatcggcgg atccgtttcg ggctgggcgc
     3241 aatacgcaac gtcggcgagg gagccattga gtcgattatc accggccgcg agcagggacc
     3301 ctatcacacg gtcaaagagc tggtcgagcg gatcgacctc cggctgtgca acaagcgggt
     3361 gctcgagtcc ctcgtggcgg caggggcctg tgattcgctg ggcggacatc gcaagcagtt
     3421 catcgaggcg ctggaacccg cgctagcgga ggcgcagctg cttcaggctg agcgggaagc
     3481 gggacagggg tcgttgttcg gagaggtcgg gaaggaccgg aagaacggga aagatgggac
     3541 cggtcacgaa ggcacctcgt tccttcccgc ccttgccgac cttcccgaca ttcccgcctg
     3601 gaccgaggcc gagcgtctgg ccaaggagaa ggaagtcctc gggttcttca
//
LOCUS       DASYRV010000223         4750 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_4027059, whole genome shotgun sequence.
ACCESSION   DASYRV010000223 DASYRV010000000
VERSION     DASYRV010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4750
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4027059"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..320
                     /locus_tag="VGQ24_05685"
     CDS             <1..320
                     /locus_tag="VGQ24_05685"
                     /inference="COORDINATES: protein motif:HMM:NF024579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454359.1"
                     /translation="DEALAEFQKALRAPESRLRTSEALGMAFFEKGQYPACESVLRKA
                     VESLDEGDEAKIGLLYWLGRAYEALGKEADAIASYERAMVVDIRFLDLSQRMKRLGAG
                     RRR"
     gene            317..1306
                     /locus_tag="VGQ24_05690"
     CDS             317..1306
                     /locus_tag="VGQ24_05690"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEV8454360.1"
                     /translation="MSPQTAPVTLAELQHPLRPRLDQVQQELRRIVEADFGLIAEVNS
                     HLFQMQGKMFRPTLLLLAEEAVGGRDPRATLLAAVTELIHLATLVHDDAVDHSVLRRG
                     MPTINALFSHQVSVIMGDYLYSRAVIELVRLDDLEPLRVLSRVTNEMTVGEMRQLLAH
                     DPLGFSEEQYDLLIRAKTASLVSGACEIGGLRAGAVERGALRRFGEALGMAFQIVDDL
                     LDYTEDASVTGKPFGSDLREHKVTLPLIAALPRMDDVERRAVSRLLHSPEPMDDQIAD
                     VIAAVARTGGLEYARERALRLAQVAEAELDVLPPSTARDALRTSITYVIDRRR"
     gene            1306..1578
                     /locus_tag="VGQ24_05695"
     CDS             1306..1578
                     /locus_tag="VGQ24_05695"
                     /inference="COORDINATES: protein motif:HMM:NF025572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4321 domain-containing protein"
                     /protein_id="HEV8454361.1"
                     /translation="MPSGPHRPRFYFGVLIAGFIVGGFLSAFFRRWLPESAARDFFTT
                     SATPVFGPISADLLVINFTLGPVGLHVSLLSLVGVLVAYLIARSLF"
     gene            1587..1835
                     /locus_tag="VGQ24_05700"
     CDS             1587..1835
                     /locus_tag="VGQ24_05700"
                     /inference="COORDINATES: protein motif:HMM:TIGR01411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HEV8454362.1"
                     /translation="MGNLGMWEILLILLVVLLLFGAKRLPEVGSSIGKGIREFKRSIS
                     DTQDAIMGPDERNNLPPRQPDTTQQPNHTSGEPKRLSQ"
     gene            complement(1971..3797)
                     /locus_tag="VGQ24_05705"
     CDS             complement(1971..3797)
                     /locus_tag="VGQ24_05705"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEV8454363.1"
                     /translation="MMQAFRNAAKPLMVVVAITFFAWLVLDLSGITGGTGLLTRTAVG
                     KVNGRSIDARTYQSMVQQSIDARQRQSPGAMGLEDYQRVRDEVWDQIVQGSVLDAEYR
                     RRGIQVSDDEIVQAMRTSPLAEFRNVPDFQTDSQFDLGKYQRWLTSSVGQQYLPALEA
                     QYRDELQRSKLLRVVTADIFLSDAALWERYRDEHEMVKVGLTAIIPRNVVPDSAVTVS
                     DAETAKYYQAHQDDFKRPRTAYLSYVALPRHTTASDTAATRVRADSARREIQGGALFA
                     DVARRESADSVSAAKGGELGEWTKGSMDPAFDSAAFSLPLKTVSQPVLSQYGFHLIEI
                     TSRKGKKAKGRHILFPIEVTSEHRDQLDAQADSLERLGAERADPAALDTVARALKLRI
                     GKSAPVQQGGKVQLGPLVIPDAAVWAFQAKRGATSPVIETSYAFYIFRLDSLQDAGVP
                     PLSQVRAGVAHEVREQKKWEQARSLAKDYLKRLEGGATMAQAAAALKLAYREFGPFSR
                     INPPLTNPIVVGTAFGLEAGKRSGILDTKDGIYVLETLQHIKADSAAFAKGLGEYRAR
                     AINLARQERVRNYITALRDAAKIVDNREKVLQTGGPQPQPGV"
     gene            3988..>4750
                     /locus_tag="VGQ24_05710"
     CDS             3988..>4750
                     /locus_tag="VGQ24_05710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454364.1"
                     /translation="MATSEIEKLERRYAENPHGLTFAPLAEVHRKNGDVTRALELLRV
                     GLELHPNYIPASIVLGRCHQDWGDLPAAEEAFAHVLRLDDENVIALKSLADINERQDR
                     LDDAERWLRRLVSVDRSNDEARQQLQRIETVKQKDSRAAPAPAAPAEAEVPPEIARVD
                     ATAAEPPVRAARAAEPRSKPAEIPALELTDDLKKEAAEPELEPAALHDRQPSPSAEVP
                     PESLVQEPAATAVAGEPAPLPGLETAEFEPPRSSPG"
BASE COUNT          803 a         1517 c         1570 g          860 t
ORIGIN      
        1 tcgacgaagc cctcgccgag ttccagaagg ctctgcgggc gcccgagtcc agactccgta
       61 cctccgaggc cctgggaatg gccttcttcg agaagggtca gtacccagcg tgtgagagtg
      121 tgctgcgaaa ggcagtcgag agcctggacg aaggtgacga agcaaagatc gggctgctgt
      181 actggttggg gagggcctac gaggcgctgg ggaaggaggc tgacgcgatc gcgagctacg
      241 agcgggccat ggtggtggac atccgcttcc tggatctgag tcagcggatg aagcgcctgg
      301 gtgcgggacg gcgccggtga gcccgcaaac cgccccggtg accctggccg agctgcagca
      361 tcctctccgc ccgcgcctgg atcaggtcca gcaggagctc aggcgtatcg tcgaggcgga
      421 tttcggcctg atcgccgaag tcaattccca cctattccag atgcagggga agatgttcag
      481 gcccaccctc ctgctgctgg ccgaagaagc cgttggcggc agggatcctc gggccaccct
      541 tctcgcggcg gtgactgagc tgatccattt ggccaccctg gtgcatgacg atgcggtgga
      601 tcactcggtc ctgcgccggg ggatgccgac gatcaacgcg ctgttcagcc atcaggtgtc
      661 ggtcatcatg ggcgactacc tgtactcgcg agcggtcatc gagctggtgc gtctggacga
      721 tctagagccc ttacgggtgc tgagccgggt caccaacgaa atgaccgtgg gtgagatgcg
      781 ccagctcctg gcccacgatc cgctggggtt ctccgaggaa cagtacgatc tcctaatccg
      841 ggccaagacc gcttcgctcg tctcgggcgc ctgcgaaatc ggcggcctcc gcgccggtgc
      901 agtcgagcgg ggggcgctgc ggcggttcgg cgaagcgctc gggatggctt tccagatcgt
      961 ggatgacctg ctcgattaca ccgaggatgc ctcagtcacg gggaagccgt ttgggtccga
     1021 cctgagggag cacaaggtga cgcttcccct gatcgctgca ttgcccagaa tggacgacgt
     1081 ggagcgtcgc gcggtctccc ggctgctgca ttcgccggaa ccgatggatg accaaatcgc
     1141 ggatgtcatc gcggctgtcg cccggaccgg cggactggag tacgcccggg aacgagccct
     1201 gcggttggct caggtggccg aggccgagct ggatgttctg ccgccctcta cggctcgtga
     1261 cgccttgcgg acgagcatta cctacgtcat agatcgcagg cgttgatgcc aagcggacca
     1321 catcgaccca ggttctactt cggggtgctt atcgccggct tcatcgtcgg cggctttctg
     1381 tcggcgttct tccggcgctg gttgccggaa agtgcggcgc gggacttctt caccacttcg
     1441 gccactcccg tcttcgggcc tatctcggcg gacctcctgg tgataaactt caccctgggt
     1501 ccggtcgggc tccacgtctc actcttgagc ctggttgggg tcctcgtggc gtatttgatc
     1561 gcccggtcgc ttttctaggg ggtcctgtgg gtaatctcgg gatgtgggag atactgctca
     1621 tcttactggt ggtgctcctt ctcttcggcg ccaagcggct gccggaggtg gggtcgtcca
     1681 tcggcaaggg cattcgggag ttcaagcgga gcatttcgga tactcaggat gccatcatgg
     1741 gccctgacga gcgcaacaat ctccccccgc gtcagccgga taccacccag cagcccaatc
     1801 acacctcggg cgagccgaag cggctgtcgc agtagggggt cgggaaggac gggaagggcg
     1861 ggaaagatgg gaaggaaaag ccccggaacc atgtggtcgc cggggctttg gtacacaatc
     1921 acgttcccgt ccttcccgcc cttcccgact ttcccgtcct tccttccccg ctagacgccc
     1981 ggctgtggct gcgggccgcc cgtctgtaag accttctccc ggttatcgac gatcttggcg
     2041 gcgtcccgta gcgcggtgat gtagttccgc actcgctcct ggcgggcaag gttgatcgcg
     2101 cgtgcccggt actcgccgag ccccttggcg aacgcagcgg agtcggcctt gatgtgctgg
     2161 agagtctcca gcacgtaaat gccgtccttg gtgtcgagga ttccactcct cttgccagct
     2221 tccaggccga aggcagtgcc taccacgatc gggttggtga gcggagggtt gatccggctg
     2281 aacggcccga actcgcggta cgccagcttc agggcggcgg ccgcctgcgc catggtggcc
     2341 ccaccctcga gccgcttcag gtagtccttg gccaggctcc gggcctgctc ccacttcttc
     2401 tgctcccgca cttcatgggc gactccggcc cggacctggg agagcggcgg aacgccggca
     2461 tcctgaaggc tatccagccg gaagatgtag aacgcgtagg aggtctcaat gaccggactg
     2521 gtggcgcccc gtttggcctg aaatgcccac accgccgcgt cggggatcac gagcggcccg
     2581 agttggactt tgccaccttg ctgcacgggt gcggatttac cgatgcggag cttgagcgcg
     2641 cgggccacgg tatcgagtgc tgccgggtcg gctcgttcgg cgccaagacg ctccaggctg
     2701 tcagcctggg catcgagctg atcacggtgc tcgctggtca cctcgatcgg gaacaggatg
     2761 tgacgtcctt tggccttctt ccccttccgg ctggtgatct cgatcaggtg gaagccgtat
     2821 tgcgacaaca ccggctggga caccgtttta agcgggagac tgaaagcggc ggagtcgaac
     2881 gccggatcca tggatccctt ggtccactca ccgagctcgc cgcctttggc tgcgctgaca
     2941 ctgtccgctg actcacgccg ggcaacatcg gcaaataagg ctcccccctg aatctcgcgc
     3001 cgggccgagt cggcgcggac gcgagtggcg gcggtgtcgc tcgccgtggt gtgccggggc
     3061 agggccacat agctgaggta ggccgtgcgg ggacgtttga agtcgtcctg gtgcgcctgg
     3121 tagtacttgg cagtctcggc gtcgctcacc gtcactgccg aatcgggcac gacgtttcgg
     3181 gggatgatgg cggtcaggcc gaccttgacc atctcgtgct cgtcccggta gcgctcccac
     3241 agagccgcat ccgagagaaa gatgtcagcc gtgaccacgc gcaggagctt actgcgctgt
     3301 agctcgtccc gatactgcgc ctcgagggca gggagatact gctgccccac gctggacgta
     3361 agccaacgct ggtacttgcc caggtcgaac tggctgtcgg tttggaaatc ggggacgttg
     3421 cggaactccg ccagcggtga agtgcgcatc gcctggacga tctcgtcgtc gctgacttgg
     3481 ataccccgcc ggcggtactc cgcatcgagc acgctgccct gcacgatctg atcccagacc
     3541 tcatcccgga cccgctggta gtcctcgagg cccatggcgc cggggctttg ccgctggcgg
     3601 gcatcgatgg actgctgcac catgctctga taggtgcgcg cgtcgatgct gcggccgttc
     3661 accttgccca cggcagtgcg ggtgagcagg ccggtaccgc cggtgatgcc gctgagatcg
     3721 agcaccagcc aggcaaagaa cgtaatggcg accaccacca tgagcggttt ggccgcattg
     3781 cggaaggctt gcatcataag acggtccgag actccaaccc aagggattcc gaagaggcag
     3841 aagcttaagg ccaacggtgc agaacctcaa ggcgccattc tgcttagcag ttgacacgcc
     3901 gggggccgcc cactactgtc accgtacctc ccccaatgac gtagcccgtc gttcctacga
     3961 cagttctgac ctcgataccg ggatccgatg gccacgagcg aaatcgaaaa actggagcga
     4021 cggtacgctg agaatccgca cgggctcacc ttcgcgcccc tggccgaggt ccaccgcaag
     4081 aacggcgacg tcactcgagc cctcgagctc ctgcgggtcg gtctcgagtt gcaccccaac
     4141 tacatcccgg ccagcatcgt actcggccgc tgtcaccagg attggggtga tctcccggcc
     4201 gccgaggaag cgtttgctca cgtcctccgg ctggacgacg aaaatgtcat cgcgctgaag
     4261 tcgctggccg acattaatga gcggcaagat cggctggacg acgctgaacg atggctgcgc
     4321 cggctggtct cggtcgatcg aagcaacgac gaagcgcgcc agcagctgca gcgcatcgag
     4381 accgttaagc agaaggatag ccgcgccgct ccggctccgg cggcccccgc ggaggcggag
     4441 gtgccgccgg agatcgcccg ggtcgatgcg acggcggcag agccacctgt tcgcgcagcc
     4501 cgcgcagccg agccgcggag caaaccggcg gagatcccgg ccctggagtt gaccgatgat
     4561 ctgaagaagg aagcggcaga gccggaactc gagcccgccg cgctccacga cagacagccc
     4621 tcgccgtctg cggaggtccc gcccgaaagc ctggtgcaag agccggcggc caccgctgtt
     4681 gccggggagc cagcgccgct tccgggactg gaaacggccg agttcgagcc cccccggtcc
     4741 tcgccgggac
//
LOCUS       DASYRV010000224         1968 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1913580, whole genome shotgun sequence.
ACCESSION   DASYRV010000224 DASYRV010000000
VERSION     DASYRV010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1968
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1913580"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1056
                     /locus_tag="VGQ24_05715"
     CDS             <1..1056
                     /locus_tag="VGQ24_05715"
                     /inference="COORDINATES: protein motif:HMM:NF025017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEV8454365.1"
                     /translation="RDRLDVKLMLEEDDPETQRAAMAASPGPHVELVVVPDGKPKTKP
                     KACNVGLAKARGEFVTIYDAEDRPEPLQLRRSVAAFQRCDPQVVCLQAKLSYYNADQN
                     LITRWFTAEYAMWFSQLLPGLVRQSAPVPLGGTSNHFRRSALLAVGGWDAFNVTEDAD
                     LGIRLHRLGLRTLVLDSTTFEEANSDFVNWVKQRSRWYKGYLQTWLVHMRHPRRLARE
                     LGLGGFVGFNLFVGGTPILALLNPVFWALTFIWFIAHPPIVAELFPPVLYYTGLLCMT
                     VGNLAFYYATIVSARVTGQPRLVLAATLAPAYWAMMSIAAIKAAVQLLVTPTFWEKTA
                     HGLDRAVPIPDGEHVPA"
     gene            1043..>1968
                     /locus_tag="VGQ24_05720"
     CDS             1043..>1968
                     /locus_tag="VGQ24_05720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454366.1"
                     /translation="MSLPEAVRPGHLVRFWPAASRSILVARRADPWVAALALFGVAFV
                     GYLAIGALIVFGTGSVPIDTWARVGNASYALYSRDPHLGAIGFVLPPVPTLAILPILP
                     FKALWPPLVTSAFAATITSAAFMAGGVVLIRRILRDMAVPIWLAWPLVALFALHPMIV
                     YYGANGLTEAPFVFCLLWATSSCLRWLDRGALADLVRLALGLAIGYLTRYEFVAAAPL
                     AVGLVAIVTYVRTPGATGARRTAAAADAVIVGLPFVLAFVGWALVSWMLVGSPFAQFT
                     SIYGNSSQVQLLHETLIEQTGQGTSAAFGYVAA"
BASE COUNT          259 a          676 c          642 g          391 t
ORIGIN      
        1 cgcgatcggt tggacgtcaa gctgatgctc gaggaagacg accccgagac ccagcgcgca
       61 gccatggccg cgtcgccggg ccctcatgtc gagctcgtcg tcgtgcccga tggcaagccg
      121 aagacgaagc ccaaggcgtg caacgtggga ctggccaagg ctcgcggaga gttcgtgacg
      181 atctacgacg ccgaagaccg acccgagccg ctacagcttc gccgttccgt ggcggccttc
      241 cagcggtgcg atccgcaggt ggtctgcctg caggcgaagc tctcgtacta caacgcggat
      301 cagaacctca tcacccgttg gttcacggcc gagtacgcca tgtggttctc gcagctcctg
      361 ccggggctgg ttcgccagtc ggcgccggtt ccgctgggtg gcacttcgaa ccatttccgg
      421 cggagcgcgc tgctcgcggt cggcggctgg gatgccttca acgtgaccga ggatgccgat
      481 ctcggcatcc ggctccaccg acttggcctc cgaactctcg tgctggattc gacgaccttc
      541 gaggaggcca acagcgactt cgtcaactgg gtgaagcagc gctcccgctg gtataagggc
      601 tatctccaga cctggctcgt ccacatgcgt catccacggc ggctggcgcg ggagctcggc
      661 cttggcggtt tcgtgggctt caacctgttc gtcggcggga cgccgatcct cgcgttgctc
      721 aacccggtgt tctgggccct caccttcatc tggttcattg cccatccacc catcgtcgcg
      781 gaactcttcc cgccggtcct gtactacacg ggcctgctct gcatgaccgt cggcaatctc
      841 gcgttctact acgcgaccat cgtgagtgcc cgggtgaccg gacagcccag gctggttctt
      901 gcggccacgt tggcgccggc ctactgggcg atgatgtcga tcgcggcgat caaagccgcc
      961 gtgcagctgc tggtgacccc caccttctgg gagaagaccg cgcacgggct cgatcgcgcg
     1021 gtgccgattc cggacggcga gcatgtccct gcctgaggcg gttcgaccgg ggcacctcgt
     1081 ccgcttctgg ccggccgcga gtcgatcgat tctcgtcgcg cgtcgggccg atccgtgggt
     1141 ggccgcgctg gccctgttcg gcgtggcctt cgtcggttac ctggccattg gcgctctgat
     1201 cgtcttcggc accggcagcg tcccgatcga tacctgggcg cgggtcggca atgcctcgta
     1261 tgcgctctac agccgagatc cgcacctggg tgcgatcggc ttcgtgctgc caccggtccc
     1321 gaccctcgcg atcctgccga tcctgccatt caaggcactc tggccgccgc tggtgacgag
     1381 cgccttcgcg gctaccatca cgtccgcggc attcatggcc ggtggggtcg tcctcatccg
     1441 ccggatcctg cgcgacatgg ccgtcccgat ctggctcgca tggcccctgg tggcgctgtt
     1501 cgcgctccac ccgatgatcg tgtactacgg cgcgaatggc ctgaccgagg cgccattcgt
     1561 cttctgcctg ctgtgggcga cgtcttcgtg cctgcgctgg ctggaccgcg gtgccttggc
     1621 cgatctggtg cgcctggcgc tgggcctcgc cattggatat ctcacccgct acgagttcgt
     1681 cgctgcggca cctttggccg tgggcctggt cgcgatcgtc acgtatgttc ggacgccggg
     1741 cgcgaccggt gctcggagga cggctgccgc ggccgacgcc gtgatcgtcg gcctgccgtt
     1801 cgtgctggcg ttcgtcggct gggcgctcgt cagctggatg ctggttggct cgcccttcgc
     1861 gcagttcacg tcgatctatg gcaacagctc ccaggtccag ctgctgcacg aaaccctcat
     1921 cgagcagacg ggccagggga cgagtgccgc attcgggtac gtcgccgc
//
LOCUS       DASYRV010000225         2831 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3782763, whole genome shotgun sequence.
ACCESSION   DASYRV010000225 DASYRV010000000
VERSION     DASYRV010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2831
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3782763"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..666
                     /locus_tag="VGQ24_05725"
     CDS             <1..666
                     /locus_tag="VGQ24_05725"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEV8454367.1"
                     /translation="MAAGASVSPVGIVRVSAVAVGFLVIAVLVGRFAVPLLFDLVVRM
                     RVRYVLLVFAIAFALGLSAVAAVAGSALIIGAFAAGIILSGTNQFDTIEREVRPVASI
                     FAPIFFVSVGASFNLRLLDPTQAGSAGLLGVAAALIVLAIVGKVAAGWAAPWVRFRRI
                     VVGVGMVPRGEVGLIFADIGRRTGVLNEAVFGAVLLMIMVTTFLAPPVLKLLFGPPQA
                     SSA"
     gene            663..1142
                     /gene="rfaE2"
                     /locus_tag="VGQ24_05730"
     CDS             663..1142
                     /gene="rfaE2"
                     /locus_tag="VGQ24_05730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase"
                     /protein_id="HEV8454368.1"
                     /translation="MIQTADKIRPLTDALGWRARQSGAIVFTNGVFDLLHPGHVELLE
                     AARQEGAALIVGLNSDASVRRLAKGADRPVTPEAARARVLAGLAAVDCVVLFEEDTPL
                     ELITRLQPDVLVKGADYSREAIVGADLVESRGGRVVRVPLVRGFSTSSIVERLRATS"
     gene            1129..1839
                     /gene="rph"
                     /locus_tag="VGQ24_05735"
     CDS             1129..1839
                     /gene="rph"
                     /locus_tag="VGQ24_05735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004549 - tRNA-specific ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEV8454369.1"
                     /translation="MPRPDGRAKDQLRPLVLERKANPYAEGSCLIRMGGTLVHCTASV
                     EPGVPGFKKGTGEGWVTAEYAMLPRATVERTSRERTGPGGRTQEIQRLIGRSLRAAMA
                     TMVFGEFTIRIDCDVLQADGGTRTAGITGGCVALADACAWLAERTGQPSPFGQLVAAI
                     SVGVVEDEVRLDLAYAEDKDAGVDSNIVMVEPAEFVEVQGTGEHATFTRGQLETMLDS
                     AERGITELFRAQRRVLGW"
     gene            1836..2474
                     /gene="rdgB"
                     /locus_tag="VGQ24_05740"
     CDS             1836..2474
                     /gene="rdgB"
                     /locus_tag="VGQ24_05740"
                     /inference="COORDINATES: protein motif:HMM:NF013854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HEV8454370.1"
                     /translation="MKLLAATRNLGKQREIRRILGASGLEIVFPDDIWLRETSDGDSL
                     ELAESFEINARRKAEYFARLSSLPTFADDSGLEVFALGGEPGVRSKRWSGASGSAAEV
                     DHANNAELLRRLAGAPEPKRLARYRCVIVFLKSAGDVPTVCQGDCTGRILEAPRGTEG
                     FGYDPLFFSDELGKTFGEATAEEKDAVSHRGRALRALAQSLSVAGRSSGGQA"
     gene            complement(2493..>2831)
                     /locus_tag="VGQ24_05745"
     CDS             complement(2493..>2831)
                     /locus_tag="VGQ24_05745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454371.1"
                     /translation="RMEGRHCFEHDQCDQTGLTLPVLEYSHSDGCSVIGGYVYRGAAI
                     PRLQGTYFYADYCRGWVRSFRVEGGMAVEETDWPALRPGGQVTSFGEDAAGELYLLTQ
                     QGGVFKIVPQ"
BASE COUNT          424 a          902 c          964 g          541 t
ORIGIN      
        1 atggcggccg gagcgtccgt atcgccggtc gggatcgtgc gcgtctccgc tgtcgcggtg
       61 ggattcctcg tcattgctgt gctggtggga agattcgcgg taccgctcct attcgatctc
      121 gtggtccgca tgcgggtgcg ctatgtcctc ctggtgtttg ccattgcgtt cgccctcggc
      181 ttgtcggctg tcgctgcggt ggccggctcg gcgctcatca tcggcgcgtt cgccgcgggt
      241 atcattctct ccggcaccaa tcagttcgac accatcgagc gcgaggtccg tccggtggcc
      301 tcgatcttcg cgcccatctt cttcgtgagc gtgggcgcgt cgttcaacct ccgcctcctc
      361 gatccgaccc aggcaggaag cgcgggcctc ctcggtgttg ccgcggcgct tatcgtgctc
      421 gcgatcgtcg gcaaggtcgc agccgggtgg gccgcgccct gggtccgctt tcggcgcatc
      481 gtcgtgggtg tgggaatggt gcctcgcggc gaggtcggtc tgatcttcgc cgacatcggg
      541 cggcggaccg gagtgctcaa cgaggccgtg ttcggtgccg tcctgctcat gatcatggtc
      601 accaccttct tggctcctcc agtgctcaag ctcctcttcg ggccgccgca ggcatcctcc
      661 gcatgatcca aaccgccgac aagatccgtc cgctgaccga cgcgctcggc tggcgagccc
      721 gccagtccgg agccatcgtc ttcaccaacg gggtctttga tttattgcac ccgggtcatg
      781 tggagctcct ggaggctgct cggcaggagg gagcggcgtt gatcgtaggc ttaaacagcg
      841 acgcttcggt tcgccggctg gccaaaggcg ccgaccggcc ggtgacgccc gaagccgccc
      901 gagcccgggt gctcgctgga ttggccgcgg tggactgcgt ggttctcttt gaggaggata
      961 cccccctgga gctcatcacc cggctccagc cggatgtcct ggtgaaaggc gcggactatt
     1021 ctcgggaggc gatcgtaggt gctgacctcg tcgagtcccg tggcggtcgg gttgtccgcg
     1081 tgccgctcgt ccgtggcttc tcgacttcat ccattgtgga gcgtctccgt gccacgtcct
     1141 gacggccgcg ccaaggatca gctcagacct cttgtgctcg agcgcaaggc taatccctat
     1201 gcagagggct cctgcctgat ccgaatgggc ggcacgctgg tgcactgcac ggcgagcgtc
     1261 gagcccggag tccccgggtt caagaaaggc accggcgagg ggtgggtcac cgccgagtat
     1321 gccatgcttc ctcgcgccac ggtggagcgg acctcaagag agcggaccgg accgggtggc
     1381 cgcacgcagg agattcagcg actgatcggg cgctctttgc gagccgcgat ggccaccatg
     1441 gtgtttggcg agttcaccat ccggatcgac tgcgatgtgc tccaggcgga tgggggcacc
     1501 cggacggcag gcatcaccgg cggctgtgtc gccctggccg atgcctgcgc ctggctggcg
     1561 gagcgtactg ggcagccctc cccctttggc cagctggttg ctgccatctc cgtcggtgtg
     1621 gtcgaagacg aggttcgcct cgatctcgcc tatgccgagg acaaggacgc cggtgtggat
     1681 tcgaatattg tgatggtgga gccggccgag tttgtggaag tgcaggggac cggcgagcac
     1741 gccaccttca cccgggggca gctcgagacg atgctggatt cggccgagcg tgggattacc
     1801 gagctctttc gggcccaacg gcgggtgctc ggctggtgaa gctccttgcc gccacgcgaa
     1861 atctcgggaa acagcgggag attcgccgca tattgggagc gagcgggctg gagatcgtgt
     1921 ttcccgacga catctggctc agggaaacgt ccgacggcga ttcgctcgag ctagccgaga
     1981 gtttcgagat caatgcacgg cggaaagccg agtactttgc ccgactgagc tcgctgccga
     2041 cgtttgccga cgattccggc ctggaggtct tcgcgctggg tggggagcct ggggttcgct
     2101 ccaaacggtg gagcggggca tccggcagtg ccgcggaggt ggatcacgcc aacaacgccg
     2161 agttgctccg gcgcttggcc ggggcgccgg aaccaaagcg gcttgctcga taccgctgcg
     2221 ttattgtctt cctgaaatcg gccggtgatg tccccaccgt atgccagggc gactgcaccg
     2281 ggcgcatcct cgaggcgccc cgcgggaccg aggggttcgg gtacgatccg ctcttcttca
     2341 gcgatgagct gggcaagacc ttcggcgagg cgacagccga ggagaaggat gcggtgagcc
     2401 accggggacg tgccttgagg gccctggccc agagcctgag cgttgctgga cgctccagcg
     2461 gaggccaggc ctaggctgag ccctttcggc gatcactgcg ggacgatctt gaatacgccg
     2521 ccctgctggg tgagcaggta aagctcgccc gcggcatctt ccccgaagct cgtcacttga
     2581 cctccgggcc ggagcgcggg ccagtcggtc tcctccaccg ccataccacc ttccacccgg
     2641 aagcttcgca cccagccacg gcagtaatcg gcgtagaaat aggtgccctg gagccgggga
     2701 atcgcggcac cccggtagac atagccgccg ataacggaac acccgtcgga atggctgtac
     2761 tccagaaccg gcagggtgag ccccgtctga tcgcactggt catgctcgaa gcaatgtcgc
     2821 ccttccatcc g
//
LOCUS       DASYRV010000226         2324 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3161523, whole genome shotgun sequence.
ACCESSION   DASYRV010000226 DASYRV010000000
VERSION     DASYRV010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2324
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3161523"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            341..1132
                     /locus_tag="VGQ24_05750"
     CDS             341..1132
                     /locus_tag="VGQ24_05750"
                     /inference="COORDINATES: protein motif:HMM:NF001753.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sir2 family NAD-dependent protein deacetylase"
                     /protein_id="HEV8454372.1"
                     /translation="MEEKVSPDAGSTALTARIGRFFGESERAVAFTGAGISTESGIAD
                     FRSPGGVWSRYQPVLFQDFLASAAARRRYWQMKKEGYRELRSAKPNAGHRALARLESA
                     GRLQAVITQNIDGLHQDAGSSRVLELHGTSRHCVCLGCDARYDPDLIQERLEAGVEIP
                     LCDRCGAFLKSATISFGQALPAQVLREAIDLCTAADLVLALGSSLVVEPAASLPLQAK
                     QNGARLVIINRTETPLDDIADVVLRESIGESLTRVLGHLGLDLAE"
     gene            complement(1700..2104)
                     /locus_tag="VGQ24_05755"
     CDS             complement(1700..2104)
                     /locus_tag="VGQ24_05755"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEV8454373.1"
                     /translation="MKVYALEHVQVAIPPNQEVRARAFYGGILGLTEVPKPPPLAARG
                     GLWFEQPGLKLHLGVEADFRPARKAHVALLVDGLAALVEACRRAGHSVVSAEPLEGFQ
                     HVYVSDPFGNRIELMEHIEPGPPDDVVGREPE"
     gene            complement(2113..>2324)
                     /locus_tag="VGQ24_05760"
     CDS             complement(2113..>2324)
                     /locus_tag="VGQ24_05760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HEV8454374.1"
                     /translation="ITPGMATLHPRGLHHGPHPGALRNQARKTQTDEYAVMLDGLNPI
                     RVLPAGSRVEWEEYWMSWMEKAPAR"
BASE COUNT          420 a          767 c          741 g          396 t
ORIGIN      
        1 tcatcctgaa cttcctttcc caatttgtct ggttagtcga ctaggtcgat cgaggaccaa
       61 gcaatcggcg tgccacgacg cgaagttgag cgatggaatc cgtggcagga gatgagaact
      121 gctgaataag caaagggaaa cggtcttgag agggatgccc ggcttcacga cagatctgaa
      181 gcctgcgtcg atcagaatct atcccttctg caactccgac tatccattcg gttagcccca
      241 gccgcgcgcc tcagcttcgg tcgaggccgc aagctcggct cggaccattc tcggaccctg
      301 ggatgggaag taagctacga tagggagggg tggagcacac atggaggaga aggtttcacc
      361 ggatgccggg agcacggccc tgaccgcccg gatcgggcgt ttcttcggcg agtcggagcg
      421 cgccgtggcg ttcaccggcg ccggcatctc gaccgagagc gggatcgcgg acttccgcag
      481 cccgggcggg gtctggagcc gctaccagcc ggtgctgttt caggacttcc tggcgagcgc
      541 cgccgcgcgg cgccgctact ggcagatgaa gaaggagggg tatcgcgagc tgcgcagcgc
      601 gaaaccgaac gcgggtcacc gggcgctggc gcgcctggag tccgcggggc gcctgcaggc
      661 cgtcatcacg cagaacatcg acggcctgca ccaggacgcc ggaagctcgc gggtcctgga
      721 gctgcacgga accagccggc actgcgtctg cctggggtgc gacgcccgct acgatcccga
      781 cctgatccag gagcgccttg aagcgggagt cgagatcccc ttgtgcgatc gctgcggcgc
      841 gttcctgaag tcggcgacca tatcgttcgg ccaggctctg ccggcccagg tgctcagaga
      901 ggcgatcgac ctctgcaccg ccgccgatct cgtcctcgcg ctcggctcgt cgctcgtggt
      961 cgagccggcg gcctcgcttc cgcttcaggc gaagcaaaac ggcgcacgcc tggtcatcat
     1021 caaccggacc gaaaccccgc tcgacgacat cgcggacgtc gtcctgcgcg aatcgatcgg
     1081 cgagtcgctc acacgggtcc tcggccacct cggtctcgat ctcgccgagt agagactcaa
     1141 catgccttcc aggccgccat cgcacgtttc gccgctctcc catccctctc gctggatacg
     1201 ggttagtgtt agcccagtgt tagccccgat ccgacaatag cacgcgccgg gcatctcccg
     1261 aacggcttgc cctgcgcggc ccgaaagcaa actctatgcg cgatcgctcc ggccatcatt
     1321 ggtggcgcct gcgcgcgacc gtcacgagag aatgcagcca ggcggaacgg tcgccgccag
     1381 gcaatccgag cctgcgagat tgtcggatcg gggttagtgg tcctctgttc gcgccggccc
     1441 gatcaagacc cgctccagca gaccagaaga gctatggtgc ttacaaacag accaatcatg
     1501 ccaagaaaca gagcgagcgc cccaggcatg gtcccagggc cgcatggacc ccaaggaccg
     1561 aacaaggggg atacggcgat aagggcgacg gatataccga cgcccttgag agcctttttg
     1621 ttccctttcg catgaagatg ctaattatga attatctttt caaaatgagt cctgtatttc
     1681 cttaatcaga ggaagatagc tactccggct cacgccccac gacgtcgtcc ggcggaccag
     1741 gttcaatgtg ttccatcagc tcgattcggt tgccgaacgg gtccgagacg tagacgtgct
     1801 ggaagccctc gagcggctcg gccgagacga ccgaatgccc ggcccgccgg caggcttcga
     1861 ccagcgccgc gaggccgtcg accagcagcg cgacgtgcgc cttgcgggca ggccggaagt
     1921 ccgcctcgac tcccaggtgg agcttcaacc ctggttgctc gaaccacagc ccgccgcggg
     1981 cggccagcgg cggcggcttg ggcacctccg taagccccag gatccctccg taaaaggccc
     2041 gagcccgcac ctcctgattc ggcgggatcg ccacctgcac gtgctcgagg gcgtagactt
     2101 tcaccgaatg actcaccggg ccggcgcctt ctccatccag ctcatccagt actcctccca
     2161 ctcgacccgg ctcccggccg gcaggacgcg gatcgggttg aggccgtcga gcatcacggc
     2221 gtactcgtcc gtttgggtct tgcgcgcctg gttgcgcagc gcgccggggt gcgggccgtg
     2281 gtgaaggccg cgcgggtgga gggtggccat gcccggcgtg atgt
//
LOCUS       DASYRV010000227         5360 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_87349, whole genome shotgun sequence.
ACCESSION   DASYRV010000227 DASYRV010000000
VERSION     DASYRV010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5360
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87349"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VGQ24_05765"
     CDS             complement(<1..268)
                     /locus_tag="VGQ24_05765"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454375.1"
                     /translation="MPRHRRAPSVHKFGGASLADSPAVCHAVEIIGSCRPEPTVVVVS
                     AMAGVTDALLEVARQAGDGDERTVASLIAQLRSRHAEVARALLPA"
     gene            360..875
                     /locus_tag="VGQ24_05770"
     CDS             360..875
                     /locus_tag="VGQ24_05770"
                     /inference="COORDINATES: protein motif:HMM:TIGR03546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03546 family protein"
                     /protein_id="HEV8454376.1"
                     /translation="MLFLLKLIQSLIKTLHSAGTPGQVAAGMALGSALGLTPLLSVHN
                     LVIFSLLVLLNVSFGGGMLGWMLFVPVGFLLDPVFDKVGLSLLTAPSLRPLWTDWTNT
                     PLLPFTDFNNTIVLGSFVSWLVLAIPIFFAARYGVAKYRATIGERVQQSKLYKAITAS
                     QVYNVYKMFRP"
     gene            872..2707
                     /locus_tag="VGQ24_05775"
     CDS             872..2707
                     /locus_tag="VGQ24_05775"
                     /inference="COORDINATES: protein motif:HMM:TIGR03545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03545 family protein"
                     /protein_id="HEV8454377.1"
                     /translation="MKVKIFRWKAIGPLLLLFALLGVLVWIFAEPVARQTTEEASSEL
                     LGTQVDVGKLDLLPRRASVDLRALQIADPFVLTRNLIEADEIRLKLNPAALAEKKIVI
                     EHLSLQGMRFGTARKKPARPPSGKGFAPQVYRAVNQWAKQFDVPLLSLTPIDTIRQLA
                     LDPTQLTTIREAQSLLARTHSVRNGLEQGFQQLNIGPTLDSARALAQRLAATDPKKLG
                     LDGTRQAIQSVQQTLKEVEGAKKRVQALERNARSAVQSLGQGVQVLDRARQKDFAFAK
                     SLLKLPTFSAPEIGGALFGKVSIDRFKQAAYWAELAQQYMPPGLLPRPTAGPKRLRAA
                     GKTIEFPKAKDFPRFLLEQGQLDFSIGGTSPIQGAYTATVQGLTSTPALYGRPAVIKA
                     SRRAAGSALASIDVGAVINHLTARTHDSASARLQGIRLPSFDLPGLPLRVNPGNGSSS
                     LMFSMRNAGAELRGRWAIGSNKVSWVADTAARRLNEIERLVLRVVSGLNDLQVVAELS
                     GSIASPKFSVSSNLDKAIAQRLQAVLGEEVAKAEKMVRAKVDSLVADKVEPVKRQVAA
                     VQTEANQRIQAEKQRLDEVEKQLNAELKRLTRGLAPGIELPKIKL"
     gene            2757..3911
                     /locus_tag="VGQ24_05780"
     CDS             2757..3911
                     /locus_tag="VGQ24_05780"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF006942.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008746 - NAD(P)+ transhydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HEV8454378.1"
                     /translation="MRIGVPRETTAGERRVALVPESCKKLIQAGYTISVEAGAGDAAG
                     FPDSAYREVGVTVWGDPAALLSSADLVLKVNAPSAGDGQGSETDWMREGAIYIGSLMP
                     LRNLDAVRALAARRITAFSTDAIPRTTRAQSMDTLSSMANISGYKGALLAASELNKYF
                     PMLMTAAGTVPPAKVFVIGAGVAGLQAIATARRLGANVFATDVRPEVKEQIESVGGKY
                     VGIELAGGASAGGGYAKELTEADRLRQGELLAAQCTQSDAVITTALIGGVFAPRLITA
                     DMVRSMKPGSVIVDLAADGGGNCELSRPGERVAVEGVTILAPLNLPATMPLHASLLFS
                     RNLTAFIQAFTQESAFKVDLTDDIQQGSVITHDGAVKHQRTQDALQKVGS"
     gene            3908..4237
                     /locus_tag="VGQ24_05785"
     CDS             3908..4237
                     /locus_tag="VGQ24_05785"
                     /inference="COORDINATES: protein motif:HMM:NF024179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HEV8454379.1"
                     /translation="MTQPLETQPLEFWSMLFVFVLASFIGVGVIRRVSRLLHTPLMSI
                     TNAISAIAVVGSIIVTGADYPRGIRILGAIALFASMTNIVSGFLITDRMLKMFKSERK
                     PGADGGS"
     gene            4234..>5360
                     /locus_tag="VGQ24_05790"
     CDS             4234..>5360
                     /locus_tag="VGQ24_05790"
                     /inference="COORDINATES: protein motif:HMM:NF014307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HEV8454380.1"
                     /translation="MTYGIVQLAYLAATVLFIFALHWMNTPATARKAVYAGVVAMAIA
                     IIATWAQPEVVHHGWIVLAIIAGFVVGVPLSRVPLTAVPQRTALSHAFGGLAAGLVGT
                     AKYYLWASEGPENLTAFRMTAILVEVLLGYLTFTGSLMAAGKLQEVKWIPQRPVTYPM
                     QNLTNLGLLAIAVGVGAALVLNPAAAWGPALFPVIIALALVFGVLLIIPIGGADMPTV
                     IAILNSYAGLAAVAMGFVLDNKLLITAGALDGSSGLILAIIMCRAMNRSFTNVLFGAF
                     GQTRQVTAGGDQKLYKSETIEGGAQVLEQANLVVIVPGYGMAVAQAQHKVRELYDQLK
                     KRGVTVKFAIHPVAGRMPGHMNVLLAEANIPYTDLVEMEEI"
BASE COUNT          944 a         1721 c         1730 g          965 t
ORIGIN      
        1 cagccggcag cagcgcccgg gctacctctg cgtgacgcga gcgcagctgg gcgatgagcg
       61 aagcgacggt acgctcgtcg ccgtcccccg cctgccgggc cacctcgagg agtgcatcgg
      121 tgacgccggc catcgcggaa acgacgacga ccgtaggctc cgggcggcag ctcccgatga
      181 tctcgacggc atggcagaca gcgggggagt cggctagcga ggcaccgccg aacttgtgca
      241 ccgacggtgc ccggcgatga cgtggcatca ggagacagtc taggatcgag agtctagagt
      301 caaggggcta agcgaccacc tcccttgacc ctagacctta gaccctagac ccttatccca
      361 tgctctttct gctgaagctc atccagtcgc tcataaagac gttgcactcc gccgggacgc
      421 cagggcaagt cgcggccggc atggctctcg gctccgcgct ggggctcacc ccgctgctga
      481 gcgtgcacaa cctggtcatc ttctccctgc tggtgctgct gaacgtgtcg ttcggcggag
      541 gcatgctcgg ttggatgctg ttcgtgccgg tcggatttct gctggacccg gtgttcgata
      601 aggtcggtct cagcctgctc acggcgccgt cgctgaggcc gctctggacc gactggacca
      661 acaccccgct cctgcccttc accgatttca acaacaccat cgttctggga agcttcgtca
      721 gctggctggt gctggccatc ccgatcttct tcgcggccag atacggtgtg gcaaagtacc
      781 gggccacgat cggcgagaga gtccagcaat cgaagctgta taaggcaatt accgcctccc
      841 aggtctacaa cgtttacaag atgttccgac catgaaggtc aagatctttc gctggaaagc
      901 gatcgggccg ctgctcctgc tctttgcgct cctgggcgtg ctggtgtgga tcttcgccga
      961 gcccgtggcc cggcaaacga ccgaggaagc gagcagcgag ctgctcggca cccaggtgga
     1021 tgtggggaag cttgatctgc tgcctcggcg cgcctccgtc gatctgcgcg ccctccagat
     1081 cgccgatccc ttcgtgctca cccgcaatct catcgaagcc gacgagatcc ggctcaagct
     1141 caatccggcc gcgctggccg agaagaaaat cgtcatcgaa cacctgagcc tccaggggat
     1201 gcgcttcggt actgcgcgga agaagcctgc acggcccccc agcggtaaag gctttgcacc
     1261 ccaggtctac cgggcggtga accaatgggc caagcagttc gatgtgccgc tgctgtcgct
     1321 gacgccgatc gataccattc gccagcttgc gctggatccc acccagctca ccaccatacg
     1381 ggaagcacag tcgctcctcg cacgcacgca ttcggtccgg aatgggctgg agcagggatt
     1441 tcagcagctg aatatcggac ccacgctcga ctcagcccgc gcgctggctc agcggctcgc
     1501 cgccaccgac ccgaagaagc tcgggctcga tggtacgaga caagctatcc agtcggtcca
     1561 gcaaacgctg aaggaggtcg agggcgccaa gaaacgggta caggccctgg agcggaacgc
     1621 acggagcgca gtgcagtcct tagggcaggg ggtccaggtt ctcgaccggg ctcggcagaa
     1681 ggatttcgcg ttcgccaagt ccttgctcaa actgccgacc ttctccgctc cagagattgg
     1741 cggcgcactc ttcggcaagg taagcattga tcgcttcaag caggcggcgt attgggccga
     1801 gctggctcag caatacatgc ccccaggact tctgccgcgc cccactgccg gccccaagcg
     1861 gcttcgggcc gcgggaaaga cgattgagtt tcccaaggcg aaggactttc cccggtttct
     1921 gctggagcag ggccagctcg atttctcgat cggtgggacg agcccgatcc agggggccta
     1981 cacggctaca gtccaaggcc tgacgtcgac gccggcgctc tatggccgcc ccgcagtgat
     2041 caaggccagc cgtcgtgctg ccggatcggc gctcgcctcg atcgatgtcg gtgcggtcat
     2101 caaccatctc accgcccgta cccacgattc cgccagcgct cgtctgcaag gcatcaggct
     2161 gccttcgttc gatcttcccg gtctccccct gcgggtcaac ccgggcaacg ggtcgagtag
     2221 cctgatgttc tcgatgagaa acgccggcgc cgagttgcgc gggcgttggg ccattggctc
     2281 gaacaaggtc agctgggtcg ccgataccgc cgcacggcga ttaaacgaaa tcgagcgact
     2341 ggttctgcgg gtcgtgtcgg ggctgaatga tctacaggtc gtcgccgagc tgagtggaag
     2401 cattgcctcg cccaagtttt cggtctccag caacctcgac aaggcgatcg cccagcggct
     2461 tcaggcggtc ctcggagagg aggtggccaa ggccgagaag atggtacgag caaaggtgga
     2521 cagtcttgtc gccgacaagg tcgagccggt gaagcgccag gtcgctgcgg tgcagaccga
     2581 agccaatcag cggattcagg ccgagaagca gcggctcgac gaggtggaga agcagttgaa
     2641 cgccgagctg aagcgcctga cccgcgggtt ggcgccgggg atcgagctgc cgaagatcaa
     2701 gctgtagggt ctagaccttt cgattgcacc atcaaacttc cagggtggaa tccccgatgc
     2761 gcatcggagt cccgcgagag acaacggcgg gtgagcggcg tgtggcgctg gtgccggagt
     2821 cctgcaagaa gctcatccag gcgggataca ccatctcggt agaagccggg gccggtgatg
     2881 cggccggctt tccggattca gcataccgcg aggtcggggt caccgtgtgg ggcgacccgg
     2941 ccgcattgct gagctcggcc gacctggtgc tgaaggtgaa cgcgcccagt gctggggacg
     3001 ggcagggaag cgagaccgac tggatgcggg aaggcgccat ctacatcggc tccctcatgc
     3061 cgctccggaa tctcgatgcg gtgcgcgcgc tcgccgcccg ccggatcacc gccttctcca
     3121 ccgacgccat tccccgcact acccgcgccc aatcgatgga tacgctctcc tcgatggcca
     3181 atatctccgg ctataaggga gcgctcctgg cggcctccga gctcaacaag tatttcccca
     3241 tgctcatgac cgcggccggc accgtgccgc cggccaaggt gttcgtcatc ggcgctgggg
     3301 tggccggact gcaggcgatt gccacggcgc gacggctcgg cgccaatgtc ttcgcgactg
     3361 acgtgcggcc ggaggtcaag gaacagatcg agagcgtggg cgggaaatac gtgggcatcg
     3421 agctcgccgg tggtgcctcg gcggggggtg gctatgccaa ggagctgacc gaggccgatc
     3481 gactccgcca gggcgagctc ctcgccgcgc agtgcaccca gtctgatgcg gtgatcacca
     3541 cggcgctcat cggtggcgtc ttcgcgcccc gtctcatcac cgcggacatg gtgaggtcga
     3601 tgaagccagg ctcggtgatc gtggacctcg cagccgatgg cggcggcaac tgcgagctgt
     3661 cgcgtccagg agagcgggtt gccgtagagg gggtcaccat cctggctccg ctcaaccttc
     3721 cggcgacgat gccgttgcac gcgagcctac tcttttctcg gaacctcaca gccttcattc
     3781 aggcgttcac ccaggaaagc gccttcaagg tggacctcac cgacgacatc cagcagggct
     3841 cggtgatcac ccacgacggc gcggtgaaac atcagcgtac ccaggatgcc ttgcagaaag
     3901 tgggatcatg acgcagccgc tcgaaaccca gccgctcgaa ttctggtcca tgctcttcgt
     3961 ctttgtgctc gcctccttca tcggagtggg cgtgatccgg cgggtgtcac ggctgctgca
     4021 caccccgttg atgtcgatta ccaacgccat ctcagccatc gccgtggtcg ggtcgattat
     4081 cgtgaccggc gccgactacc cccgcgggat acggatcctg ggggcgatcg cgctgttcgc
     4141 gtccatgacc aacatcgtca gcggctttct gatcaccgac cggatgctga agatgttcaa
     4201 gtcggaacgt aagccgggag cggacggcgg ctcatgacct acgggatcgt tcagctcgcc
     4261 tacctcgccg cgacggtcct gttcatcttc gcgttgcact ggatgaacac gccagccacg
     4321 gcccggaagg ccgtgtatgc cggggtcgtc gcgatggcca tcgcgatcat cgccacctgg
     4381 gctcagccgg aggtggtcca tcacggatgg atcgttctgg cgatcatcgc cgggttcgtg
     4441 gtcggcgtgc cgctgtcccg agtccctctc accgccgtcc cccagcgaac cgccctgtcc
     4501 cacgccttcg gcggcctcgc ggcgggcctg gtcggtacgg ccaagtatta cctctgggcg
     4561 tcggagggtc ccgagaatct gaccgcgttc aggatgaccg ctattctggt ggaggtcctg
     4621 ctcggctacc tgacgtttac cggaagcctc atggcggcgg gcaagctgca ggaggtgaag
     4681 tggatccccc agcgtccggt cacctacccg atgcagaatc tgaccaacct cgggctcctg
     4741 gcgatcgccg tgggggtggg tgcggcgctg gtcctcaacc ctgccgccgc ctgggggccg
     4801 gccctctttc ccgtcatcat cgcgctcgcg ctggtgttcg gggtcctgct gatcataccc
     4861 atcggcggtg ccgacatgcc gacggtgatt gcgatcctca attcctacgc cggcctggcg
     4921 gcggtggcga tggggtttgt cctggataac aagctgctga tcaccgccgg ggcgctggac
     4981 ggctcgagtg gtctgattct ggccatcatc atgtgccggg caatgaaccg gtcgttcacc
     5041 aacgtgctct tcggcgcctt tggccagacc aggcaggtca cggccggcgg tgatcagaag
     5101 ctgtacaagt cggagacgat cgagggcggg gcccaggtcc tggagcaggc caacctggtg
     5161 gtgatcgtgc caggctacgg catggccgtc gcccaggccc agcacaaggt gcgtgagctg
     5221 tatgaccagc tcaagaagcg cggggtgact gtgaagttcg ccatccatcc ggttgcgggc
     5281 cggatgccgg ggcacatgaa cgtgctgctc gccgaggcca acattccata cactgacctg
     5341 gtggagatgg aagagatcaa
//
LOCUS       DASYRV010000228         6136 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1540138, whole genome shotgun sequence.
ACCESSION   DASYRV010000228 DASYRV010000000
VERSION     DASYRV010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6136
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1540138"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..286
                     /locus_tag="VGQ24_05795"
     CDS             <1..286
                     /locus_tag="VGQ24_05795"
                     /inference="COORDINATES: protein motif:HMM:NF039287.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454381.1"
                     /translation="SAANLFVQQTAPWALAKAGKDDELDRALSALARSLARLAAMASP
                     FIPGKAQAIWTMLGLEGQVGSLEWSAVEQPPVSSCTVRPPEVLFPKPATV"
     gene            485..1408
                     /locus_tag="VGQ24_05800"
     CDS             485..1408
                     /locus_tag="VGQ24_05800"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEV8454382.1"
                     /translation="MAKRRWTLVLVPHGSEPSRIVEISYGLLRLVTGAVGGVVVLGLL
                     AGYVTVSHTTDLSRAARLQQENASLAREIGELHGRLVTLADTLTRISQRDARIRVLAN
                     LDPIDPQVQAAGIGGPASSEIGLAGLAGVSRRTADIRVDLGALIRRANLLASSFKEAA
                     DSLALHTARLAATPSIMPTQGWLSSAFSSMRSHPILHMARPHEGIDVSAPMGSPIEAP
                     AAGVVTDAGWETGYGNTIIIDHGFGIVTKFAHASKLLVRNGQRVSRGQRIALVGNSGL
                     ATGPHLHYEVHVNGRPVNPLKYVLPEGVVTD"
     gene            complement(1536..2102)
                     /locus_tag="VGQ24_05805"
     CDS             complement(1536..2102)
                     /locus_tag="VGQ24_05805"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEV8454383.1"
                     /translation="MKRSLRTRLPLITTFMLIAGCGYNTIQTMDERVNQAQGQIQTQL
                     QRRSDLIPNLVNTVKGITKQEDTVFISIANARARLGGAVQSGNVPEMAAANQQLNQGL
                     GRLLAIAENYPQLRSSENFRQLQDQLEGTENRISVARQDYNTAVGEYNAYIRRFPYNL
                     TAKVFAMGKPREYFEAAPGAAEVPKVTF"
     gene            complement(2099..2821)
                     /locus_tag="VGQ24_05810"
     CDS             complement(2099..2821)
                     /locus_tag="VGQ24_05810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454384.1"
                     /translation="MRESVARVVDPFLTEADKALGQGYSAVLYGSAARGDFVPGRSNI
                     NLMVVMDQLTPSILRSLSRAFAGWRKGTTEPPLMLSRAEWTRATDAFPIEIADMRTSY
                     RVLRGPDPLQDVTVDPTDLRKALEREFRGKLLRLRQGYTTYAPDPAALGKLGLQSAAT
                     ILVLLRGVLTLIGKTVPSDPLELAAAAAAAIGFEGEHLLHVVRHRVDREWRCQAPEFE
                     NYMKAVEDSARYLDQLQLGDQQ"
     gene            complement(2821..3687)
                     /locus_tag="VGQ24_05815"
     CDS             complement(2821..3687)
                     /locus_tag="VGQ24_05815"
                     /inference="COORDINATES: protein motif:HMM:NF016424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HEV8454385.1"
                     /translation="MSAGDLLSGTRAKATALLAVLQLIVIPAWPLLGAALRAQSRGAD
                     SLIPAQPVGYVNDFASVLDAESAAQMEDLIKRLRAATGAEIAVVTLPSIGDREASEVA
                     LAIGRRWKIGSKAEIGDARRNAGLVLLLVPRRPGDPNSGQIRVEVGQGLEGIVTDAAA
                     GQVRDLMRPELSNEKYGPGLLTGVRALSSLIARGFGVSDTSLTAYQPPNDSGGSPVGS
                     SLIPILLFIAFMLLASGVGGRRRRRGGVYWGGPWIGGGWGGGGGFGGGGGGFGGFGGG
                     GGFSGGGAGGRF"
     gene            3783..4460
                     /locus_tag="VGQ24_05820"
     CDS             3783..4460
                     /locus_tag="VGQ24_05820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454386.1"
                     /translation="MRVSIPGPDAVETPASGVGVVALPYDRDSVLASLAARASSPRPH
                     TAEMDTLFARFRGPFIAYTTTAYAAGKLRDSLAEVQGRLDALGRGSPQYQSLHARLSR
                     LSDSLASIEIRGERARAALARARSDFVTRSESLRAAIHQWEDSTYRGWDSIVEKLAKA
                     RGLEPATDTTDATGWARFTLAPGKWWIYARAWDTSDPNSEWYWNVPVGGDTVLLSSRT
                     GQQRPRY"
     gene            4469..5203
                     /locus_tag="VGQ24_05825"
     CDS             4469..5203
                     /locus_tag="VGQ24_05825"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEV8454387.1"
                     /translation="MSPFKAMIVPNLSAVILSTAKDLSSACGEILRSLRSLRMTATLV
                     TALAIHLIAIPVHAQTKTAPLDTRSKGSPKAPVTVYEMSDFQCPYCRRFAEETFPGLE
                     RSYITTGKVRWVFINFPLTDVHTHAAAAAQLALCAAKQNGFWRVHDLLFQYQDTWAPL
                     KEAGPFFVSLADSAGLSKQALLTCLEAPETVQAVQADAEGAARSGAGSTPTFYIEGGL
                     LEGAVPFSVFRQVLDSVYAVKTGGRR"
     gene            complement(5313..6068)
                     /locus_tag="VGQ24_05830"
     CDS             complement(5313..6068)
                     /locus_tag="VGQ24_05830"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family glutamic-type intramembrane
                     protease"
                     /protein_id="HEV8454388.1"
                     /translation="MNSTVSRYWSEARAPRYSLSFAFPLLLVYEVLALTLSSGDVSGV
                     RNGADVLLKSLFLMLGGRDGLAVFGIVLVGGGAAILWRDYRRAGQIRPRYFAWMAAES
                     IGYALTFGVVAGTLTVLLLPGLSVARNASALGVGFLAEWSLPTQLMISLGAGIYEELL
                     FRAILVSGLGWLATFGFGWGATRANVFAVCLGALIFSAFHYIGPYGETLDLSSFTFRS
                     VAGLLFSGLYVLRGFGITAWTHALYDVFLAVGR"
BASE COUNT         1115 a         2015 c         1922 g         1084 t
ORIGIN      
        1 ttcggcagcg aacctgttcg tgcaacagac tgcaccgtgg gcgctggcga aggcgggtaa
       61 ggacgacgag ctggaccgag cgctgagtgc gcttgcccgg tctcttgcgc ggctcgcagc
      121 aatggcgagt ccgttcattc ccggaaaggc tcaggcgatc tggactatgc tcggattgga
      181 aggccaggtg gggtctctgg agtggtctgc cgtggagcag ccgccggtgt ccagctgcac
      241 cgtgagacca cctgaggtgc tcttccccaa gcctgcaacg gtgtagcagt tagacttttt
      301 gtccagcgaa accatttgac agtgaaagag ttatcactct cgctggccct tgacaatcct
      361 catctccgtg agccacctta actttggaga cgtgactcga tcacgtcgtc gcaaccggga
      421 aggtggtcat actgtagagt cgattcaccc gagtacttca gcgaggttcg tttgaggtgt
      481 agccatggct aaacggcgtt ggaccctagt tctcgtcccc cacgggtcgg agccgtcgcg
      541 tatcgttgag atttcctacg gcctgctccg actggtgacc ggtgcggtgg gtggcgtcgt
      601 ggtcctcggg cttctcgccg ggtacgtcac cgtctcccat actaccgacc tctcgcgtgc
      661 tgccagactc cagcaggaaa acgcctcgct cgcgcgcgaa atcggtgagc tgcacggccg
      721 cctggtgacc ctggctgaca ccctcacccg catctctcag cgcgacgccc gcattcgggt
      781 cctggccaat ctggacccga tcgatccgca ggttcaggcc gccggcatcg gtggcccggc
      841 ctcatccgag atcggtcttg cggggctcgc cggagtcagc cgccgcactg cggacattcg
      901 ggtagatctc ggcgcgctca tccggcgggc caacctcctg gcctcatcgt tcaaggaagc
      961 ggccgacagc ctggcgctcc acaccgcgcg gctggctgcc acgccatcca tcatgccgac
     1021 gcaagggtgg ctctccagcg ccttctcctc gatgcggagc caccccatcc tgcacatggc
     1081 tcgcccgcac gaaggcatcg acgtctctgc gccgatgggg agcccgatcg aggcacccgc
     1141 ggcgggggtg gtgaccgatg cgggctggga aacgggatat ggcaacacca tcatcatcga
     1201 ccatgggttc gggatcgtta ccaagttcgc tcacgcctcg aagctgctgg tgcggaacgg
     1261 ccagcgggtc tcccggggcc agcggatagc tctcgtgggc aattcgggac tcgccaccgg
     1321 tccccacctc cattacgagg tgcacgtgaa cggccggccc gtgaatccgt tgaagtatgt
     1381 tctgcctgag ggggtcgtga cggactagga cgggaaggat gggaaagtcg ggaaagacga
     1441 gaggtgacta catgacgaag ccccggtgac catttggtcc cggggctctt tctttccttc
     1501 cgatcctccc gtccctccca tccttcccgc cctctctaaa acgtcacctt cggcacctcc
     1561 gcggcgcccg gtgccgcctc gaagtactcg cgcggcttcc ccatggcgaa caccttggcc
     1621 gtgaggttgt acgggaaacg gcggatgtag gcattgtatt ccccgacggc ggtgttgtag
     1681 tcctgacgcg ctaccgagat gcgattctcg gttccctcga gctgatcctg gagctgacgg
     1741 aagttctcgc tggagcggag ctgcgggtag ttctcggcga tggcgaggag ccgtcccagt
     1801 ccctggttga gctgctggtt ggcggcggcc atttcgggca cgttccctga ctgcaccgcg
     1861 ccgccgagcc gcgcgcgggc gttggcaatc gaaatgaaca ccgtgtcctc ctgcttcgtg
     1921 atccccttca cggtattcac caggtttgga atcaggtcgg agcggcgctg gagctgggtc
     1981 tgaatctgtc cctgggcctg gttgacccgt tcgtccatcg tctggatcgt gttgtagccg
     2041 catccggcaa tcagcatgaa ggtcgtgatg agcggcagac gcgttctgag agagcgcttc
     2101 attgctgatc tccgagctga agttgatcga ggtacctggc cgaatcctcc acggccttca
     2161 tgtagttttc gaattccggg gcctggcagc gccactcgcg gtcaactcgg tgacgaacca
     2221 cgtggagcag atgctcgccc tcgaacccga tggccgcggc ggcggcggcg gcgagctcga
     2281 gaggatcaga agggaccgtc ttgccgatga gtgtcaggac cccacgtaac aacaccagaa
     2341 tggtcgcggc gctctggagg cccagcttgc cgagcgcggc aggatcggga gcataagtcg
     2401 tgtagccttg tcggaggcgc agcagcttgc cccgaaactc ccgctcgagt gccttccgca
     2461 gatcggtggg atctaccgtg acatcctgga gcggatcggg tccccggagc acccgatacg
     2521 aggtccgcat atccgcgatc tcgatcggaa aggcatccgt tgcgcgagtc cactcggctc
     2581 ggctgagcat cagcgggggt tccgtcgttc ccttgcgcca gccggcgaac gcgcggctga
     2641 gggagcgaag gatcgacggc gtcagctgat ccatgacaac catgaggttg atgttcgatc
     2701 gccctgggac aaaatcgccc cgcgctgccg agccgtataa caccgcgcta tagccctgac
     2761 cgagagcctt gtccgcctcg gtaagaaatg gatcgaccac ccgagcgact gactcgcgca
     2821 tcagaatctt cccccggcgc ctccgccgct gaagccgcct ccgccgccga agcctccaaa
     2881 gccgcctcca cctccgccga agccgcctcc cccgccccac ccaccaccaa tccacgggcc
     2941 accccaatat actcctcccc tgcggcggcg acggccgccg acgcccgacg caagcagcat
     3001 gaacgcgatg aagaggagaa tgggaatgag gctactgccg accggtgagc cgccactgtc
     3061 gttgggaggc tggtatgcgg tcaggctggt gtcggagaca ccaaagcccc gcgcaatgag
     3121 gctggagagg gcacgcaccc cggtgagcaa tcccgggccg tacttctcat tcgagagttc
     3181 cgggcgcatg aggtcgcgca cttgcccggc cgccgcatcg gtgacaatgc cttccagccc
     3241 ctgcccaacc tcgacccgga tctgccccga gttggggtcg ccaggccggc gcggcaccag
     3301 caggagcacg aggccggcgt tccggcgggc atcaccgatc tcagcctttg agccgatctt
     3361 ccatctgcga ccgatggcaa gcgccacctc ggaagcttcg cgatcaccga tcgagggcag
     3421 cgtcaccacg gcgatctcgg cgccggtcgc agcgcggagc cgcttgatga gatcctccat
     3481 ctgggcggcc gactcggcat cgagcaccga ggcaaagtcg ttcacgtagc cgacgggctg
     3541 cgccggtatc agcgagtctg cgccccggct ctgcgcccgc agcgcggcgc cgagcagggg
     3601 ccaggcaggt atgacaatca gttgaagcac cgccaggagc gcggtagctt tggcccgtgt
     3661 cccgctcaat aggtcccccg ctgacaagcc gctggctccg tcgctgggtg tttgggtcca
     3721 cgctgctttg cgcggggctc gcggcggcga tcgccgggtg caagagtacg cgagatgtag
     3781 cggtgcgggt ctcgatacct ggccccgatg cagttgagac tcctgcctcg ggcgtgggag
     3841 tcgtcgcgct gccctacgac cgtgacagcg tgctcgcgag tcttgccgct cgtgcctcca
     3901 gcccgcggcc gcacaccgcg gagatggata cactgttcgc ccgcttccga gggcccttca
     3961 tcgcgtatac cacgaccgca tacgcagccg gcaagctgcg cgacagcctc gcggaggtgc
     4021 agggtcggct cgacgcgctc gggcggggta gcccgcaata tcagtcgcta cacgcccgcc
     4081 tctcccggct gtccgactcg ctcgcgtcga tcgagatccg gggcgagcgt gcgagagcgg
     4141 cactggcccg cgcgcgctcg gatttcgtga cccgaagcga gagcctccgc gccgctattc
     4201 accagtggga agatagcacc taccgtgggt gggacagcat cgttgaaaag ctggcaaagg
     4261 cgcgcggcct cgagccggcc accgatacca ccgacgcaac cggctgggcc cggttcaccc
     4321 ttgcaccagg gaaatggtgg atctacgccc gtgcctggga caccagtgac ccgaattccg
     4381 agtggtactg gaacgttccg gttggcggag acacggtgct cctgtccagc cgtactggac
     4441 agcagcggcc acgctactag gagatgtgat gagcccgttt aaggcgatga ttgttcccaa
     4501 tctaagcgct gtcatcctga gcacagcgaa ggatctctct tctgcatgcg gagagatcct
     4561 tcggtcgctg cgctccctca ggatgacagc aacattggtc acagcactgg cgatacacct
     4621 cattgccata ccagtccacg cgcagaccaa aacggcaccg ctggacactc gcagcaaggg
     4681 gtcgcccaag gcgccggtga cagtgtatga aatgtcggat tttcagtgtc cctactgccg
     4741 gcggtttgcc gaggaaacct tccccgggct ggagcgaagc tacatcacga ccggcaaggt
     4801 ccgctgggtc ttcatcaatt tcccgctcac cgacgttcac actcacgcgg ccgccgctgc
     4861 gcagctcgcg ctctgtgccg ccaaacagaa cggtttctgg cgggtccacg acctgctctt
     4921 ccaataccag gacacctggg ccccgttgaa ggaggcgggc ccattcttcg tgtccctggc
     4981 cgattcggcg ggcctctcca aacaagcgtt gctcacctgc ctcgaagcgc cagagacggt
     5041 ccaggcggtt caggcggatg cggaaggcgc cgcacgctcc ggggcaggta gtacgccgac
     5101 attctacatc gagggaggcc tgctcgaggg ggcggtgccg ttcagcgtgt ttcgccaggt
     5161 gctggattcg gtgtatgcgg tgaagacggg cggtaggcgg tagggcggta cggcggtacg
     5221 gcggtacgat ttcctttcca gcaccgcggt atctaccgcc gcttcacctc ccgccgcttc
     5281 atttaccgtc gcttcatcta ccgccgcttc atctaccgcc cgactgccag aaacacatca
     5341 tacagcgcgt gcgtccatgc ggtgatcccg aagccgcgta gcacatacag cccgctgaac
     5401 agaagcccgg ccacgcttcg gaatgtgaag gagctgaggt ccaacgtctc gccgtagggt
     5461 ccgatgtagt gaaaggccga gaagatgagc gcgcccaggc acacggcgaa aacgttcgcc
     5521 cgggttgccc cccacccgaa gccgaaagtt gccagccacc cgagccccga cacgaggatc
     5581 gcccggaaca gaagctcctc gtagatgccg gccccgagag aaatcatcag ctgagtcggc
     5641 aggctccatt cggccagaaa tcctacgccc agcgcggagg cattcctggc aaccgagagt
     5701 ccgggcagca acagtacggt gagtgtgccc gcaacgacgc cgaatgtgag agcatagcct
     5761 atggattccg cggccatcca cgcgaagtag cgcggccgga tctgtcctgc gcggcgatag
     5821 tcccgccaga gaatggcggc gcctccgcct accaacacga ttccgaaaac ggccaggcca
     5881 tcccgaccac ccagcatcag gaacaagctc ttcagcagga catcggcacc atttcgcact
     5941 cctgagacat cgccgctgga caatgtgagg gcgagaacct cgtagaccaa cagcagcgga
     6001 aatgcgaagc tcaggctata gcgcggtgcc cgggcctcgg accagtacct ggatacggtg
     6061 gaattcatgg gatgcagaga gataatacaa aaaaaggggc cgctcctcgc ggccccccag
     6121 gttcgaagtg tcgcct
//
LOCUS       DASYRV010000229         5663 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2953745, whole genome shotgun sequence.
ACCESSION   DASYRV010000229 DASYRV010000000
VERSION     DASYRV010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5663
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2953745"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..842)
                     /locus_tag="VGQ24_05835"
     CDS             complement(<1..842)
                     /locus_tag="VGQ24_05835"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEV8454389.1"
                     /translation="MPHREDDTPLWTPGPDRIARANLTAFIKHIKKLKPPGAEAVDDF
                     DSLYRWSVERPEWFWPMVWEFCGVIADERPGRAPWDDVVVGLDRMAPPDPKLGPRWFS
                     GARLNFAENLLRYADDHPAIVFWNEQGRQRELSYAELGGEVARAERTLERHGVRPGDR
                     VAGFLPNIPETIIAMLATTSLGAIWSSCSPDFGANGVLDRFGQIRPRLLFCADGYRYA
                     RKEIDSLERVREVRSRIPEIERVVVVPYVANQPDIGSIPGAVLWDAWVGQQGSGAAGQ
                     VSSN"
     gene            complement(953..2146)
                     /locus_tag="VGQ24_05840"
     CDS             complement(953..2146)
                     /locus_tag="VGQ24_05840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HEV8454390.1"
                     /translation="MPIYHTMGQIPRKRHIAFRKPDGGIYAEELMGHEGFTGTSSLLY
                     HTYPPTTVKSAKRLREQKYEADSDNTLRHRHFRTSKVKKGGSPTLDRVPLLFNQDVAM
                     LYVEPDENDAHFYRNAQADELVYVSKGTGTLETIYGDLPYREGDYLVIHRGIMHRYRL
                     DLGAEQTKLLIMESRGHVRWPKRYRNEFGQLIEGAPYSERDIRRPTQLRTHDERGDFR
                     ILVKQYDGLNEIILDHHPFDVVGWDGYFYPWAFNINDFEPIVGRVHQPPPVHQTFQGD
                     GFVVCSFCPRPYDFHPEAVPAPYNHSNVDSDEVLYYASSEFMSRKGIEFGSITHHPDG
                     IPHGPHPGRAEASIGAKYTEELAVMMDTFRPLKVAKSALSIEDPDYHKSWLDAQHAQF
                     NPPTS"
     gene            complement(2257..3381)
                     /gene="hppD"
                     /locus_tag="VGQ24_05845"
     CDS             complement(2257..3381)
                     /gene="hppD"
                     /locus_tag="VGQ24_05845"
                     /EC_number="1.13.11.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003868 - 4-hydroxyphenylpyruvate
                     dioxygenase activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylpyruvate dioxygenase"
                     /protein_id="HEV8454391.1"
                     /translation="MQTGTARAAETVTDTFPINGTDYVEFYVGNAKQASHYYRTAFGF
                     QLVAYRGPETGTRDRASYLLQQNKVRLIVTSPISPDHPAAAHVAQHGDGVRDIALWVD
                     DAREAFDVAVERGARPAQRPTVLKDDAGEVIIAAIHTYGDTIHTLVERRNYRGLFMPG
                     FQPVQPRYSPSPVGLLYVDHCVGNVELGAMNKWVAFYQDVMGFRNLISFDDKDISTEY
                     SSLMSKVVASGNDRIKFPINEPAQGRKKSQIDEYLEFYRGPGVQHLAIATDDIIQTVT
                     ALRDRGVEFLQVPKSYYDTVQERVGRIDEKLAQLKELGILVDRDDEGYLLQIFSKPVQ
                     DRPTLFYEIIQRKGAKSFGKGNFKALFEAIEREQAARGNL"
     gene            complement(3460..5592)
                     /locus_tag="VGQ24_05850"
     CDS             complement(3460..5592)
                     /locus_tag="VGQ24_05850"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEV8454392.1"
                     /translation="MAVENQPFGPERAQLIDQAGRALYQARTYEAAVRVAAGSTVPGL
                     ADLAVVVVTGEGLDERIEVAHTDARREPLVREMLVRSMDSIRRATARELKAGRQFRWV
                     QDVSRGVGRFLTRTDPELIELLQALEVHSLIVVPLRTGRRLLGAVALARTTVDRPYHA
                     ADLAVAQVIARKAAVAIDNAELHQRAQDEATRRSRLEDALQRWIRVFDVAGWGAAIVD
                     AADLRIDSVNPAFARIHGYPHPESLIGQLFTTLLLPDQSDETDRWSKLNDRSQAYESV
                     HLRADGTTFPVLTDVTALEMEPGAASYVVTVQDVTELKRAEERLRRAQRMEAVGRLAG
                     GVAHEVNNMMTIILGFGDLLAAADLSPDREREVEEIRKAAIRTARITQQLLAFSRQQV
                     LQPADLQLDEVVGEMSTVLRHLLPANVRVETRLSPVSATIHADRAQLDQVLINLAFNA
                     RDAMPMGGTLRLETGSRHFDAADGTRLIGIPISPGQYAVLSVSDTGQGMDSATLGQVF
                     EPFFTTKTVGSGTGLGLATVYGVVKQSGGFVWVESMPGKGTTFTVCLPQLAHRAAVPE
                     HQIPPEGPAHARGSAMILVIEDEDGVRELARRVLEEEGYAVREVASGADAVAILDAAA
                     SEIDLVLADVIVPDMGTVELERRMLERRPGLPILYMSGYARDEVVSRGLIPGDRPFIQ
                     KPFTGAELVDVVGRELDRTAARGGPVTI"
BASE COUNT          977 a         1813 c         1783 g         1090 t
ORIGIN      
        1 ctgttgctgc taacctgccc cgcggccccg ctgccctgct gccccaccca cgcatcccac
       61 aggaccgctc ccgggatact cccgatgtct ggctgattgg cgacgtacgg caccacgacg
      121 acgcgctcga tctccggtat ccgactccgc acctcgcgga cccgctcgag cgagtcgatc
      181 tcctttctgg cataccggta gccatcggcg cagaagagca atcgcggccg gatctgcccg
      241 aagcgatcga gcacgccatt ggcgccgaag tcgggggagc aggacgacca gatcgcgccc
      301 aggctggtcg tggccagcat ggcgatgatg gtctcgggaa tgttggggag aaagccggca
      361 acccgatcgc cgggacggac accgtggcgc tcgagcgttc gctctgcgcg cgcgacctct
      421 ccgcccagct cggcgtagct gagctcgcgc tggcggccct gctcgttcca gaagacgatc
      481 gcggggtgat cgtcggcgta gcgcagaagg ttttcagcga agttgagccg cgcgccggag
      541 aaccagcgcg gaccgagctt cgggtccggt ggcgccatgc gatcaagacc gacgacaaca
      601 tcgtcccacg gagctcggcc cggtcgctcg tcggcgatca caccgcagaa ttcccagacc
      661 atgggccaga accactcggg gcgttcgacc gaccagcggt agagcgagtc gaagtcgtcg
      721 accgcttctg ctcccggcgg cttcagtttt ttaatgtgtt tgataaacgc ggtgagattg
      781 gcccgcgcga tgcggtctgg accaggggtc cagagcggtg tgtcatcttc tctgtgtggc
      841 atcgtcctgg gaagtgtcgg agagatcctt cgctgcgctc aggatgacag ccagtgcgga
      901 cttgcttctc cgagcaaggc gcattcttcc cgcccttccc gtccttcccg tcctacgatg
      961 tcggcgggtt gaactgcgcg tgctgcgcgt cgagccacga cttgtggtag tcagggtcct
     1021 caattgagag cgccgacttg gccaccttca gcgggcggaa ggtgtccatc atgaccgcca
     1081 actcctcggt gtacttggct ccgatgctcg cctccgcccg gcccggatgc ggcccgtgtg
     1141 gaatgccatc aggatgatgt gtgatgctgc cgaattcgat accctttcgg ctcatgaact
     1201 cgctcgacgc gtagtagagc acctcgtccg agtccacgtt gctgtggttg tacggcgccg
     1261 gcacggcctc ggggtggaag tcgtagggcc gcgggcagaa gctgcagacc acaaagccgt
     1321 cgccctgaaa cgtctgatgc actgggggcg gctggtgcac tcggccgacg atcggctcaa
     1381 agtcgttgat gttgaacgcc cagggataga aatacccgtc ccatcctacc acatcgaaag
     1441 gatggtggtc gagaatgatc tcattcaacc cgtcgtactg cttgacgaga atccggaagt
     1501 cgccccgctc atcatgggtg cggagctggg tcggtcgccg gatgtctcgc tcgctgtagg
     1561 gtgcgccctc gatcaactgg ccgaactcgt ttcggtaccg cttgggccag cgcacatgcc
     1621 ctcggctctc catgatcagg agcttggtct gctcggcgcc gaggtcgagt cggtaccggt
     1681 gcatgatgcc ccgatggatc accagatagt cgccctcacg gtacggcagg tcgccgtaga
     1741 tcgtctccag agttcccgtg cctttgctga catagaccag ctcgtccgcc tgggcattgc
     1801 ggtagaagtg ggcgtcgttc tcgtccggct cgacgtagag catcgccacg tcctggttga
     1861 acaggagagg aacccggtcc agcgtcgggc tgccgccctt cttgaccttc gaagtccgga
     1921 aatgccggtg acggagagtg ttgtcggagt cggcctcgta cttctgctcc cggagccgtt
     1981 tggccgattt caccgtggtg ggaggatagg tgtgatacag cagcgaggac gtcccggtaa
     2041 atccctcgtg ccccatcagc tcctcggcgt agatgccgcc gtcgggtttc cgaaacgcga
     2101 tgtggcgctt gcggggaatt tgccccatgg tgtggtagat cggcatctca acctccaaaa
     2161 agcgtgagcg gtgagcggtg aacggtgagc gggttggaca aacagacctg ttgtcgcgag
     2221 cccgctgacc gcttaccgct taccgcttac gctgtatcac agatttcctc tggcagcttg
     2281 ctctctctca atcgcctcga acaacgcctt aaaattgccc ttgccgaagc tcttggcgcc
     2341 cttccgctgg atgatctcgt agaacagggt ggggcgatcc tgcaccggct tgctgaagat
     2401 ttgcagcaaa tagccctcgt cgtcccggtc caccaagatg ccgagctcct tgagctgggc
     2461 cagcttctcg tcgatccggc cgactcgctc ttgcaccgtg tcgtagtagc tcttgggcac
     2521 ctgaagaaac tctaccccgc gatcccgcaa cgcggtgacg gtctggatga tgtcgtcggt
     2581 ggcgatggcg aggtgttgca caccgggtcc gcggtagaac tcgagatact cgtcgatctg
     2641 ggatttcttg cgaccctggg ccggctcgtt gatggggaat ttgatccggt cgttgccgct
     2701 cgcgaccacc ttcgacatga gcgacgagta ttcggtcgaa atgtccttgt cgtcgaagga
     2761 gatcaggttc cggaatccca tcacgtcctg gtagaaggcg acccacttgt tcatcgcgcc
     2821 gagctcgaca tttcccacgc agtggtccac gtacaggagg ccgacgggag acgggctgta
     2881 ccgcggctgc accggctgga acccgggcat aaagaggccc cgataatttc gtcgctccac
     2941 cagcgtgtgg atggtatcgc cgtaggtgtg aatcgccgca attatcacct cacccgcgtc
     3001 gtccttgagc acggtcggcc gctgcgctgg gcgggctccc cgttccaccg ccacgtcgaa
     3061 ggcttcccgc gcgtcatcga cccagagcgc gatatcccgc actccatcgc catgctgagc
     3121 cacgtgagcc gcggcgggat ggtccgggct gattggagag gtcacgatga ggcggacttt
     3181 gttctgctgg agaagatagg aggcccggtc tcgggttccg gtttccggcc ctcgataggc
     3241 caccagttga aagccaaagg ctgtgcggta gtagtggctc gcctgcttgg cgtttcccac
     3301 gtagaactcg acgtaatccg tcccgttgat cggaaaggta tcggtgacgg tctcggcggc
     3361 tcgggcagtg ccggtctgca tgatcccccc tgatcgaagc gcgacggtgg tggccggttc
     3421 agcgtggcgg cggtaggacg gcgcctaacc ggaaaataat catatagtta ccggcccacc
     3481 acgggcggcg gtgcggtcca gctcgcggcc aacgacatcc accagctcgg caccggtaaa
     3541 cggtttctgg atgaatggcc gatcgccggg aatgaggccg cgactcacca cctcgtcccg
     3601 ggcgtagcca gacatgtaaa ggatagggag accgggccgc cgctccagca tccgccgctc
     3661 cagctcgacc gttcccatgt cgggcacgat tacatccgcg aggaccaggt cgatctcgga
     3721 tgcggcggcg tcgagtatgg ccaccgcatc cgccccgctt gctacttctc tcaccgcgta
     3781 gccctcctct tcgagcactc gccgggccaa ctcgcggaca ccgtcctcgt cctcgatgac
     3841 gagaatcatc gcactgcctc gggcatgcgc ggggccttcc ggggggatct ggtgctccgg
     3901 aacggctgcg cgatgtgcca gctgtggcag gcagacggtg aaggttgtgc cctttccggg
     3961 catgctttcc acccagacga acccgccgct ctgcttgacg acgccataca ccgtggcgag
     4021 gccgagtccg gtgccggatc ccaccgtctt ggtggtgaag aaaggctcga aaacctgtcc
     4081 cagcgtcgct gagtccattc cttgcccggt atcgctcacg gaaagaaccg catactgacc
     4141 cggagaaatg gggatcccga tgaggcgcgt gccatctgcc gcatcgaagt gacgggaccc
     4201 ggtctcgagg cggagtgtcc cacccatcgg catcgcgtca cgcgcattga aggccaggtt
     4261 gataagcacc tgatcgagct gggcccggtc ggcgtgaatg gttgccgata ccggggagag
     4321 cctcgtttcg actcgaacat tggcggggag gagatgccgg agcaccgtcg acatttcccc
     4381 taccacttcg tcgagctgga gatcggccgg ctggagcacc tgctggcggc tgaaggcgag
     4441 gagctgttgg gtaattcgag cggtgcgtat ggcggccttt cggatctcct ccacttcccg
     4501 ctcgcgatcg ggagagagat cggccgccgc cagcagatca ccgaacccca ggataatagt
     4561 catcatgtta ttcacttcat gtgccactcc acccgccaga cgaccgaccg cttccatccg
     4621 ctgagcccgc cggagccgct cctcggctcg cttgagctcg gtgacatcct gcaccgtgac
     4681 gacgtacgag gccgctccag gctccatctc cagcgcggtg acatcggtca gtacaggaaa
     4741 ggtcgtgccg tcggcgcgca ggtgcacgga ctcatacgcc tgggaacgat cgttcaattt
     4801 gctccaccga tcggtctcgt cggattggtc cggaaggagc agcgtagtga acagctgtcc
     4861 gatcaggctc tctggatgcg ggtagccgtg gattcgtgcg aaggccgggt tgaccgaatc
     4921 gatccggaga tccgcggcgt cgacaatggc tgcgccccac ccggcgacat cgaagacccg
     4981 aatccacctc tgcagcgcat cctcgaggcg gctgcgccgt gtcgcctcgt cctgggcccg
     5041 ttggtggagc tcggcgttat cgatggcgac ggcagccttg cgggcgatga cctgcgccac
     5101 cgccagatcg gccgcatggt agggccggtc gaccgtggtc cgcgccagcg ccacagcgcc
     5161 gaggagccgc cgtcccgttc gcagtggcac cacaatcaac gaatggactt cgagtgcctg
     5221 gagcagctcg atcagctcgg gatcggtccg ggtcagaaac ctgccgacgc ctcgactgac
     5281 atcctggacc caccggaact gtctgcctgc cttgagttcc cgtgccgtgg cccggcggat
     5341 gctgtccatg gaccggacga gcatttccct taccaggggc tcccgacgag cgtcggtgtg
     5401 cgcgacttcg atccgctcgt ccaggccctc acccgtgacc acgacgaccg caaggtcggc
     5461 caggccggga accgttgatc cggcggcgac acgaacggcg gcttcgtaag tccgcgcctg
     5521 gtacagcgcg cggccggcct gatcgatcaa ctgggcccgc tcgggcccga atggttggtt
     5581 ctctacagcc actctcctgc ctctcccgca gatcgatcat agcgccaggg aagtcgactt
     5641 tcacccactt tggcaacggt ctc
//
LOCUS       DASYRV010000230         6120 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3783675, whole genome shotgun sequence.
ACCESSION   DASYRV010000230 DASYRV010000000
VERSION     DASYRV010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6120
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3783675"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..1259)
                     /gene="ftsA"
                     /locus_tag="VGQ24_05855"
     CDS             complement(6..1259)
                     /gene="ftsA"
                     /locus_tag="VGQ24_05855"
                     /inference="COORDINATES: protein motif:HMM:TIGR01174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEV8454393.1"
                     /translation="MSHQPQRLVAALDLGTTKAVAVIAEVTGDARDPGAKILGLGVER
                     SAGIRRGVVRDIEETTRALDKAMKSAQRMAGVEVGSIYCGLAGEHVAGRTSHGMVSVT
                     GDEIRTSDVARVNDMASSVSFGRDHELLHAIPQDYLIDQQGGISEPIGMTGSRLEAEV
                     YLVTVLSSVLQNMRKCVERAGYHVAEFVLEPLAASLAVLTPDEIELGCAIVELGGGST
                     NVSIFHSGRIRHTGSLPCAGGHVTADIVHGLQVTQHDAERLKERFGAAFEPLVPESDV
                     FELPSTPGQGARNAQRRVLAHIMHMRLQEVLEYALDEITRAGYHQRLPAGVIITGGGA
                     LAPGIVELAREVFAMPARCGVPGQRLRGLADSVESPRMAVPAGLVLYGARQVAVSGGL
                     GPGGRKSPAVEKMLAPVRRWLQDFF"
     gene            complement(1256..1918)
                     /locus_tag="VGQ24_05860"
     CDS             complement(1256..1918)
                     /locus_tag="VGQ24_05860"
                     /inference="COORDINATES: protein motif:HMM:NF020067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HEV8454394.1"
                     /translation="MQLLGALAAVGVIWYGGPRLLRRLEFFRIRRVEIAGLQYLAPAK
                     VMAALELDSRSSVFDNLAGADRRLKAVPGIESAELRRRLPGTLEIVLEEAVPVALAPR
                     TSGMALLDSSGKVLPFDPAASAPDLPIAATPDRVVARVLASVLVNDPVLFARIRAAWR
                     VQDDVILDLDGRRLWLGPAVTAEDIRAVMAVAQDLARQGRNYRELDGRFAGQVIVRRA
                     GV"
     gene            complement(1957..3330)
                     /gene="murC"
                     /locus_tag="VGQ24_05865"
     CDS             complement(1957..3330)
                     /gene="murC"
                     /locus_tag="VGQ24_05865"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR01082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEV8454395.1"
                     /translation="MALFNPTDKRTVHFMGIGGAGMSALALIARRRGVAVSGCDVDPS
                     GAADLSALGVMVSQGHDGAHLVGARAVVVTAAVPPGHPELERARELGLLIVPRKVALA
                     ELIQGAHAVGVAGTHGKTTTTVMTTEALTAAGLNPTGIAGGRVSSWGGNARVAGDELF
                     VVEADEFDQAFLTLYPTVAVVNNVEPDHLECYGTMDVLENAFVEFAGRARIAIACADD
                     PGARKVAERVGKTVRKFGLAADADIRITDVVQRADRTEARIVWRDGRSVALRLQVPGL
                     HNLRNAVAALGVVDALEAPLEPAAAALGEFSGVGRRFERLGEFSGVAVVDDYAHHPSE
                     LAATLSAARQAFPGRRLVAVFQPHLYSRTAAHGQAMGEALAAADLVIVTEIYPAREQP
                     IAGVSGRQVADAAGRAGADAHFEPTRAEVGKTVYRALRAGDVVLTLGAGDITRVAPEL
                     VRWLSAA"
     gene            complement(3380..4504)
                     /gene="murG"
                     /locus_tag="VGQ24_05870"
     CDS             complement(3380..4504)
                     /gene="murG"
                     /locus_tag="VGQ24_05870"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: protein motif:HMM:TIGR01133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEV8454396.1"
                     /translation="MTSVPSTVPAFPRSTVLIAGGGTGGHLMPALAIAAALEEHAPHI
                     HPVLVGASRGVEARILPARDYRYHLLPTEPIYRRTWWKNFRWPFVAGRLLQEVARVFD
                     QERPSAVLGTGGYASGPVVWWAARNRIPTAIQEQNAYPGLATRWLSRRVRHVYLGLPE
                     AGRRLRFGKGTQVFDTGNPIAPPTPDRRGAALAKFGLDGRRLVVLVTGGSQGALAINR
                     TVAGWLDAGEGRDAALIWVTGRSTHGEFARYHAPPDVRVIDFLDPMADAYAVADLVVS
                     RAGMITVAELCAWGLPSILIPLPSAAADHQSHNARVLAAAGAADLLPQAELTVERLAA
                     VASGLLRDEGRRKQMAGRALARGRPNSAREIVSNFLTLIS"
     gene            complement(4501..5790)
                     /locus_tag="VGQ24_05875"
     CDS             complement(4501..5790)
                     /locus_tag="VGQ24_05875"
                     /inference="COORDINATES: protein motif:HMM:NF013279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative peptidoglycan glycosyltransferase FtsW"
                     /protein_id="HEV8454397.1"
                     /translation="MSLRPVRHPGELRWETRLLGMVTVVLVVFGIAATYGAASLVTLD
                     GQNLGIGFALRQLSGAFVGGLLLLLASRLDYYRWRQLAWPLLFLTIGFLLVPLLPFTR
                     AIAPLVNGARRWVDIGPFNFQPSELARVVVVIWCAMLASKKGEQVREFKKGVLPFILI
                     LGVISVLILLEPNLSMATVVALLGGLVLFTSGAKIGHFALFAGMAMILVFHQIRDVQY
                     RLARLLTFLNPGDATTEAGFQIHQSLVGIGSGQIFGVGFGEGQQKLGYLPYAYSDFLF
                     STIGEEWGFIGVLLVVSLFTLFCWLGFRIARTATDPFGQYLAVGLTAAIGLTAFMHMA
                     VSLGLIPTTGLTLPFMSYGRSSQVISLLATGILINVGRLRGSARAAGPRKGRTGGRAE
                     RRNDGTKEGGNEGRREGWDYRTRDRQERVTRPRKSRG"
     gene            complement(5787..>6120)
                     /locus_tag="VGQ24_05880"
     CDS             complement(5787..>6120)
                     /locus_tag="VGQ24_05880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454398.1"
                     /translation="EVAIAALDRPFVLLLGGRHKGEPYTRLVDRLRNRCRAVVAYGEA
                     GPLIVKDLGSSLTVVPAKTFDDVLATAHSLARPGDAVLLSPACSSYDMFRNYEERGDR
                     FRAAVEAL"
BASE COUNT         1094 a         2158 c         1938 g          930 t
ORIGIN      
        1 ccgcctcaga agaagtcctg gagccaccgt cgcactggag caagcatctt ctccaccgcc
       61 ggtgacttcc gcccacccgg gcccaaccct ccgctcactg caacctgcct ggccccatag
      121 agcaccaggc cggctggtac cgccatccgg ggcgactcga cactgtcggc caagccgcgc
      181 aaccgctgtc cgggcacacc gcatcgcgcc ggcatcgcga acacctcgcg ggccagctcc
      241 acgatgccgg gtgccaaagc acccccacca gttatgatga cgccggccgg caagcgctga
      301 tgatacccag cccgcgtgat ctcgtcgagc gcatactcga gcacttcctg gagccgcatg
      361 tgcatgatgt gggcgagcac gcgccgctgg gcgttgcggg ccccctggcc tggcgtgctg
      421 ggcagctcga acacgtcact ctccggcacc agcggctcga aggccgcacc gaaccgctcc
      481 ttcagccgct cggcatcgtg ctgggttact tgcagaccgt ggacgatgtc agccgtaacg
      541 tgcccgccgg cgcagggcag cgatccggtg tggcggatcc tgccgctgtg gaagatcgag
      601 acgttggtcg agccgccgcc caattcgacg atggcacacc ccagctcgat ttcatccggc
      661 gtgaggaccg ccagggaggc cgccagcggc tcgagaacaa actcggcgac atggtatccg
      721 gcccgctcga cgcacttccg catgttctgg agcacgctcg acagcaccgt caccagatag
      781 acctcggcct cgaggcggga cccggtcatc ccaatgggct cactgatacc gccctgctgg
      841 tcgatcagat aatcctgggg gatcgcgtgc agcagctcgt ggtcgcgccc gaagctcacg
      901 ctgcttgcca tgtcgtttac ccgggcgacg tcgctggtgc ggatttcgtc cccggtcacc
      961 gacaccatgc catgggaggt gcgccccgct acgtgttccc cggccaagcc gcagtagatc
     1021 gagccgacct cgacgccggc catgcgctgg gcgctcttca tcgccttatc gagtgcccgg
     1081 gtggtctcct cgatgtcgcg aaccactccg cgccggatgc cggcgcttcg ctccacaccc
     1141 aggccgagga tcttcgcacc cggatcccgc gcgtcacccg tcacctccgc gatcaccgcc
     1201 accgccttcg tcgtgccgag atccaaggcg gcgacgagcc gctgaggctg gtggctcata
     1261 ctcccgcccg acggacgatg acctgacccg cgaagcgtcc atcgagctcc cgataatttc
     1321 gcccttgccg ggcgaggtcc tgcgcgaccg ccatcaccgc tcgtatatcc tccgccgtca
     1381 ccgccgggcc caaccacagc ctgcgtccgt cgagatccag tatcacgtcg tcctgtaccc
     1441 gccaggcagc cctgatccgg gcgaacagca ccggatcatt caccagcacg ctcgccagaa
     1501 ctcgagccac tactcgatcg ggagtcgccg cgatcgggag atcgggagcc gatgccgcgg
     1561 gatcgaacgg gagcaccttg ccgctcgagt cgagcagcgc catgcccgac gtccggggcg
     1621 cgagcgccac cggcacggct tcctccagca cgatctccag cgttcccggc agccggcgcc
     1681 ggagctccgc agactcgatg cccggcacgg ccttcagtcg gcggtcagcg cccgccaggt
     1741 tatcgaagac actcgaccgg gagtccagct ccagggccgc catcaccttg gctggagcaa
     1801 gatactgaag tccggcgatt tccacccgtc ggatccggaa gaattcgagc cggcgcagca
     1861 gcctcggccc gccataccag attaccccta cggccgcgag ggctccaagc agctgcacaa
     1921 caagccgaac gcgcggatgg ccgagctcaa cgcggctcag gctgcgctca accaacggac
     1981 cagctcgggt gccacccgag tgatatcacc ggcgccaaga gtgaggacga cgtcgccggc
     2041 cctgagcgcg cggtagacgg tcttgccaac ctcggcgcga gtcggctcga aatgagcgtc
     2101 tgccccggcc cgtccagcgg cgtcggccac ctgccgaccg ctgaccccgg cgatcggctg
     2161 ctcccgcgcg gggtagatct cggtgacgat caccagatcg gcggccgcga gcgcctcacc
     2221 cattgcctgc ccatgcgcgg cggtgcggga gtaaagatga ggctgaaaca ccgccaccag
     2281 gcgtctcccg ggaaaagcct gccgcgctgc cgagagcgtc gcggccagct cggaagggtg
     2341 atgggcgtag tcgtccacca ctgccacgcc ggagaactcg cccagccgct cgaaacggcg
     2401 gcccacgccg ctaaactcac ccagcgcggc cgcggcgggc tccagcggcg cctcgagtgc
     2461 gtccaccacg ccgagcgccg ccaccgcgtt gcgcagattg tggagcccgg gaacctgaag
     2521 gcgaagggca accgagcggc catcgcgcca aacaatccgg gcctcggtac gatcggcccg
     2581 ctgcaccacg tcggtgatcc tgatgtcggc gtcggcggcc aggccgaatt tccgtactgt
     2641 cttgcctacc cgttcagcca ccttccgcgc gcccggatcg tcggcgcagg cgatggcgat
     2701 gcgagcccgc ccggcgaact cgacgaacgc gttctcaagc acgtccatgg tcccgtagca
     2761 ttccaggtga tcgggctcga cgttgttcac caccgcgacg gtagggtaca aagtcaggaa
     2821 agcctggtcg aattcatcgg cctcgaccac gaacaactcg tctcctgcca cccgcgcatt
     2881 tccgccccag ctgctcaccc tgccgccggc gatgcccgtc gggttgagcc cggcggcggt
     2941 cagggcttcc gtggtcatca cggtcgtcgt cgtcttgccg tgcgtcccgg cgaccccgac
     3001 cgcatgtgct ccctggatca gctcggccag ggcaaccttg cggggcacga tcagcaggcc
     3061 cagttcccgg gcgcgttcca gctccgggtg tccgggggga actgcggccg tcacgaccac
     3121 ggcccgggcg ccgacgagat gcgccccatc atgtccctgc gataccatga cgccgagggc
     3181 actgagatct gcggccccag aggggtccac gtcgcaaccg ctcacggcca cccctcgccg
     3241 gcgcgcgatc agtgcgagcg cactcatccc ggccccgccg attcccatga agtggacagt
     3301 gcgcttatcc gtggggttga acagtgccat gttagatggg ctaatgtaag atgttgctgc
     3361 aagttccgaa agtgcgccgt cacgagatga gcgtcaaaaa gttcgacact atctctcgcg
     3421 ctgagttggg ccggccgcgg gccaaggcgc gccccgccat ctgtttccgg cggccctcgt
     3481 cgcggagaag cccgctcgca acagccgcca gccgctcgac cgtgagttcg gcctgaggca
     3541 gcaggtctgc tgctcccgct gccgccagga cccgggcgtt gtgactctgg tgatcggccg
     3601 cagcgctcgg cagcggaatg agaatgctgg ggagccccca cgcacacaac tcggccacgg
     3661 taatcatccc cgcgcgggag accaccagat ccgccaccgc gtaggcatcg gccatgggat
     3721 ccaggaagtc gatcactcga acgtccggcg gcgcgtggta ccgggcaaat tcgccgtggg
     3781 tgcttcgccc cgtcacccag atgagcgcgg cgtccctccc ttccccggcg tcgagccagc
     3841 cggcgaccgt gcggttgatg gcgagcgcgc cctggctgcc gccggtgacc agcactacca
     3901 ggcgccggcc atctaaaccg aacttggcca gtgccgcgcc gcggcggtcg ggtgtgggag
     3961 gggcaatcgg attccccgta tcgaaaacct gtgtgccttt tccaaaccgc agccgccggc
     4021 cggcttcagg gagacccagg tacacgtgcc ggactcggcg gctcagccag cgggtggcga
     4081 gaccggggta ggcattctgc tcctggatcg cggtgggaat tcgattgcgg gccgcccacc
     4141 agaccaccgg ccccgaagcg tagccaccgg tcccgagcac cgctgatggc cgttcctggt
     4201 cgaagacgcg cgccacctcc tggagtagtc gccccgccac gaatggccag cgaaagttct
     4261 tccaccaggt gcgccggtag atcggctcgg tgggaaggag atgatagcgg tagtcgcggg
     4321 cggggaggat ccgggcttcg actccccggg acgcaccaac gagcacggga tggatatggg
     4381 gtgcatgctc ttccagcgcg gccgcaatag ccagcgccgg catcaggtgt ccgccagtcc
     4441 cgccgccggc aatgaggacg gtggaacgag ggaaggctgg aacggtggaa gggactgagg
     4501 tcatcctctg ctcttcctag gcctcgttac tcgctcctgt cggtctctcg ttcgatagtc
     4561 ccaaccttcc cttcttccct cgttcccgcc ttcctttgtt ccatcgttcc ttcgttccgc
     4621 ccgtccgccc gtccgtccct tcctcggtcc agccgcccgc gcactgcccc ggagtcgtcc
     4681 cacgttgatg agaatgccgg tggcgagcag ggagatcacc tggctcgacc gtccatatga
     4741 catgaacggc agcgtcagtc cggtcgtcgg gatcaagccg agggacaccg ccatgtgcat
     4801 gaaggcagtg agcccgatcg cggccgtgag gccaacggcg agatactgcc caaacgggtc
     4861 cgtggcagta cgggcgattc gaaatccgag ccagcagaag agtgtgaaga gggagacgac
     4921 gaggaggacc ccgatgaatc cccattcctc accgatcgtg ctgaatagga aatcggaata
     4981 ggcgtacggc aggtagccca gcttctgctg tccttcgccg aagcccaccc cgaagatctg
     5041 gcccgatccg atcccgacaa gcgactgatg gatctggaag cccgcttcgg tcgtggcgtc
     5101 gcccggattg agaaacgtga gcaggcgggc cagccgatac tggacatcgc ggatctggtg
     5161 aaagaccaga atcattgcca tcccggcgaa cagcgcgaag tggccgatct tggcgccgga
     5221 ggtgaagagc accaggccgc cgagcagcgc gacgacagtc gccatcgaca ggttcggctc
     5281 gagcagaatc agcaccgata tgacgccgag gatcaaaatg aagggaagga cgcccttctt
     5341 gaactcgcgg acctgctcgc ccttcttgga agccagcatc gcgcaccaga tcaccacgac
     5401 gacgcgagcc agctcggagg gctggaagtt gaacggaccg atgtccaccc agcgtcgagc
     5461 gccgttgacc aaaggcgcaa tggcccgggt gaagggaagc agcggcacca ggagaaagcc
     5521 gatcgtgagg aacagcaggg gccaggcgag ctggcgccat cggtagtaat ccagacgcga
     5581 ggcgagaagc agcagaagcc cgccgacgaa tgcgccggag agctgccgga gtgcaaaccc
     5641 gatccccagg ttctggccgt ccagcgtgac cagactggcg gcaccatagg ttgcggcgat
     5701 gccgaacacc accagcacca ccgtgaccat gcccaggagt ctggtttccc agcgaagctc
     5761 accggggtgg cggaccggcc gcaggctcac aatgcctcaa cggcagcgcg gaagcggtcc
     5821 ccgcgctcct cgtaatttcg gaacatatca tagctcgagc aggccggcga cagcagcacc
     5881 gcgtcaccgg ggcgggccag gctgtgcgcg gtcgcgagca cgtcgtcgaa cgtcttcgcg
     5941 gggaccacgg tgaggctcga tcccaggtcc ttcacgatca ggggtcccgc ttcaccgtag
     6001 gcgaccaccg cgcgacagcg attccgtagc cgatccacca ggcgggtgta cggttctccc
     6061 ttgtgccgtc cgccgagcag gagcacgaag ggccgatcga gtgccgcgat cgcaacctcc
//
LOCUS       DASYRV010000231        22812 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3369957, whole genome shotgun sequence.
ACCESSION   DASYRV010000231 DASYRV010000000
VERSION     DASYRV010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 22812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22812
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3369957"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1394)
                     /gene="ptsP"
                     /locus_tag="VGQ24_05885"
     CDS             complement(<1..1394)
                     /gene="ptsP"
                     /locus_tag="VGQ24_05885"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HEV8454399.1"
                     /translation="MSGPRLLRGIGVSPGVAWAPALVMRWDFPQVPDRTVTAGEIEGE
                     VQRLREAVDYVVSHLQGLGERVLQRAGPEESRIFDAQILMAQDEEFLKSVETLIRKNQ
                     FSAETAYEFRALELRQHWSSAARLRDRLADLHAIQMRMIQRLLGRTDNELWSIPADEQ
                     VIVVAHELSPGLTVQLDRDHVVGLVSEEGTRTAHAAILAHSLGIPAVMGAAGALAVIP
                     NGTTLLIDGQSGTIVLDPNRDELEDARVQVSRRQRLELQLEGVVGQPAVTPSGRAISL
                     MGNVDLPEEIEAAVRHGAQGVGLLRTEFLITGRAVLPSEDEQTDYFRRVARAFPDQTV
                     IIRSFDLGGDKFPAAFKAPTEANPFLGWRSIRVCLDEPEVFRPQIRAVLRAAAGYDLQ
                     LMLPLITTVQEVQEARDMVAEEARALAAAGVRAAPSVPVGVMIETPAAVLMADQLAEV
                     SAFFSVGTNDLTQYT"
     gene            complement(1391..1657)
                     /locus_tag="VGQ24_05890"
     CDS             complement(1391..1657)
                     /locus_tag="VGQ24_05890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HEV8454400.1"
                     /translation="MIERAATIVNSEGLHARPAARIVRLASTFDSEIEILKDGVGVNG
                     KSIMGVMMLAAECGSSITIRAQGPDAEQAAEALAALVADGFGEQ"
     gene            complement(1654..2388)
                     /locus_tag="VGQ24_05895"
     CDS             complement(1654..2388)
                     /locus_tag="VGQ24_05895"
                     /inference="COORDINATES: protein motif:HMM:NF015570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HEV8454401.1"
                     /translation="MNGRLRAMLRLFAVQGTWNYERMLGVGMGYAAEPLLEDLKAVDP
                     VRHGEAVVRSAEFFNCNPNLAGLALGATARAEYEAVPGAQIVRLRTALCSPLGALGDQ
                     LFWAGLVPALVGFALIAVVLGAGWWAIGGFLVIYNAVRLWTSYWSLRTGMETGMRVGA
                     AIGSSWLPRAIERVGPAAGFALGASIPAVAVWYLTDFGWAAAIGTAGVAVAGIALTRW
                     FGPALTSVRFALLAILLLLLFRRIGL"
     gene            complement(2385..3065)
                     /locus_tag="VGQ24_05900"
     CDS             complement(2385..3065)
                     /locus_tag="VGQ24_05900"
                     /inference="COORDINATES: protein motif:HMM:NF015566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEV8454402.1"
                     /translation="MTEFSPHVVVPLLVWGSLVGLDLVSVPQAMISRPLVAGTVAGWL
                     AGDTEAGLRIGVLFELFALDILPVGAVRYPDYGPATVVAAALAAGTPWELSLGVSAAL
                     GLVLAVVGGWSLQVVRRWNARAIQRKAAALSAGESSAIRWLQYGGLLRDAVRGLILTL
                     LGLILASTITDSLRVDRQTAVALTLVSIGSALSAGGSAAFRSSGRGDRLKWLVGGLVV
                     GTLIAVLA"
     gene            complement(3062..3538)
                     /locus_tag="VGQ24_05905"
     CDS             complement(3062..3538)
                     /locus_tag="VGQ24_05905"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF015769.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEV8454403.1"
                     /translation="MSIVLCRIDDRLIHGQVVIGWGRALSIDLIILVDDQVAASDWEQ
                     ELYRMAVAPEIEVRFVTVAEASRQMADWQANGKRGLVLTGDLETMAALHAASPLLVHK
                     INLGGIHHRPGRRERLPFLYLTDQELRTLLDLEAGGAVITAQDLPTTPPVALRSLP"
     gene            complement(3538..3912)
                     /locus_tag="VGQ24_05910"
     CDS             complement(3538..3912)
                     /locus_tag="VGQ24_05910"
                     /inference="COORDINATES: protein motif:HMM:NF015567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454404.1"
                     /translation="MSEELRGVVVCHAALAGALVQAAAQISGVDAALIPVSNIGCDRD
                     TLEQRVLAAVDEHPAVVFVDMASGSCLVAVLKRLRADDAVRVVTGVNLAMLVDFVFHR
                     SLSPEAAASRAAAIGQASIRLP"
     gene            complement(3905..4867)
                     /gene="hprK"
                     /locus_tag="VGQ24_05915"
     CDS             complement(3905..4867)
                     /gene="hprK"
                     /locus_tag="VGQ24_05915"
                     /inference="COORDINATES: protein motif:HMM:TIGR00679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr(Ser) kinase/phosphatase"
                     /protein_id="HEV8454405.1"
                     /translation="MLPLGDFLSRRGDPLQLEPLTGELGLDRQMPEAEVAGPGLALAG
                     YTGRFAPNRLHVFGETEITYLNSLTLEERKKSLEKFFSFDLFCIFVTKGQEIPSEMLE
                     LARSKGVPVLRSKLKTAEFYRRIKPIVEEAFAPRTTLHGSLADVYGVGLLFVGRSGIG
                     KSECVLDLVERGHRLVADDVVQVTRRGNDVLIGRGHELAAHHMEIRGIGLIDIPALFG
                     VRAVRQQKRIEVVVQLEDWETAKDADRTGLAREETTILDVAVPRVVVPLNPGKNITVI
                     SEVVAMMHLLRYSGVDVAAAFNARLIKRMKDQRGVREYLQEDYE"
     gene            complement(4867..5208)
                     /locus_tag="VGQ24_05920"
     CDS             complement(4867..5208)
                     /locus_tag="VGQ24_05920"
                     /inference="COORDINATES: protein motif:HMM:NF014534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPF/RaiA family ribosome-associated protein"
                     /protein_id="HEV8454406.1"
                     /translation="MAEPGGTIMETTITARHCEIPEGLRERAITVVERLGKVTPRPME
                     MTVVFDTDGLEQTAELRLHMARGEILVARGEGADHRTALDRAEERLRRQVERASDRPR
                     RARSSPTKNPL"
     gene            complement(5201..6322)
                     /locus_tag="VGQ24_05925"
     CDS             complement(5201..6322)
                     /locus_tag="VGQ24_05925"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEV8454407.1"
                     /translation="MNILLVNWQDRANPHAGGAEIHLFEIFGRLAAAGHRVRLVCSGW
                     EGAPPRASIEGISVERVGRRNSFALLSRRAVRRAIRAERPDILVEDVNKLPLFLTLGT
                     KVAFCAIVPHLFGTTAFDEASWPIATAVWAAERPLPWAYRRAGFHAISESTRDDLVAR
                     GVPRNRIRVIHPGVDSRHFTPAPGGRRSATPTFLYVGRLKHYKGVGLALRALALARRR
                     RPDLRLEIAGTGDCRDELEQLAASLELDRAVTFHGFVSEERKIDLMRTAWANVFPSPK
                     EGWGITVMEAAACGTPSLASESPGLRDSVRHGETGYLVPHGDVEGLAARMVELADSPP
                     LVARLGERARRFAESLPWEQTAAATERHLKDIIEGPTDG"
     gene            complement(6348..6761)
                     /gene="nusB"
                     /locus_tag="VGQ24_05930"
     CDS             complement(6348..6761)
                     /gene="nusB"
                     /locus_tag="VGQ24_05930"
                     /inference="COORDINATES: protein motif:HMM:NF013216.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEV8454408.1"
                     /translation="MLRPETKSRARALQILYAWELQGAPPISRVATGLARLTGPEPRI
                     FDRAEALAAGIVSEIEILDAQASRASENWRMDRMAVVERNILRMGIHELRRGEVPPKV
                     AIDEAVHLAHWFGDVRAPGFVNGILDGVARSLGRL"
     gene            complement(6742..7227)
                     /gene="ribH"
                     /locus_tag="VGQ24_05935"
     CDS             complement(6742..7227)
                     /gene="ribH"
                     /locus_tag="VGQ24_05935"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HEV8454409.1"
                     /translation="MPDFSGRLRSSGRVAILVSRYNELITKRLLEGALTCCGEAGLAR
                     DQIDVVWVPGAFELPSAAAAAADSHAYACLVALGAVIRGETPHFDYVAGETARGLSDV
                     AVRHALPVGFGVLTVDTMQQAVDRAGGSAGNKGYEAAAAALQTADVLAQVRAYHAQTR
                     D"
     gene            complement(7232..8440)
                     /locus_tag="VGQ24_05940"
     CDS             complement(7232..8440)
                     /locus_tag="VGQ24_05940"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA];
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HEV8454410.1"
                     /translation="MTTFGTIEQAIDDLRNGKIIIVADDEDRENEGDLVCAAELATPE
                     MINFMTLQGRGLICLALTGDRCDQLGLSQMTERNTEELSTAFTVSIDAQRRFGVTTGI
                     SATDRATTIHVAINPATVPSDLRRPGHIFPLRARPGGVLQRVGQTEASVDLARLAGLN
                     PAGVICEILNPDGSMARRPQLQDIAQQHGLTFVTVAQLVAYRLRTEQLVHRVAEARIP
                     TEFGEFTIIGYRNDVDKAEHVALVYGDIAGQANILVRMHSKCLTGDVFGSQRCDCGFQ
                     LHRAMELISREGKGAVVYLDQEGRGIGLLNKIRAYSLQDNGADTVQANERLGFAPDLR
                     NYGIGAQILRDLGLSSIRVMTNNPRKLVGLEGYGLEIVERVPLLADPNHENHTYLQVK
                     RDKLGHLFTH"
     gene            complement(8437..9027)
                     /locus_tag="VGQ24_05945"
     CDS             complement(8437..9027)
                     /locus_tag="VGQ24_05945"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEV8454411.1"
                     /translation="MFTGIITDVGTVQHTRRTAGGLELTIACSFSDLELGESVAVDGA
                     CLTVQAIQRGGFTVHVVPTSLERTRLGDYAEGRRVNLERALRMSDRLGGHLVQGHVDG
                     VGEVVQVVQQQDARLLDIEAPEEVARVSVPLGSITVDGVSLTVNAIPGPRVIQISLIP
                     FTLQHTTLGERRAGDRVHLEADTIGKYVAGLMEERR"
     gene            complement(9027..10100)
                     /gene="ribD"
                     /locus_tag="VGQ24_05950"
     CDS             complement(9027..10100)
                     /gene="ribD"
                     /locus_tag="VGQ24_05950"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: protein motif:HMM:TIGR00326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEV8454412.1"
                     /translation="MNEQEAMAQALDLAWRGWGRVQPNPLVGAVVLRDGELVGQGWHP
                     EFGDRHAEAVALAGAGDRARGATMVVTLEPCSHQGKQPPCTQAIIHAGIRRVVAALRD
                     PNPVAAGGAEQLRSAGVEVELGAAEDAAAAQNAIFLHTLRNPSRPFVALKLTTTLNGR
                     IADGFGRSRWISGEEAREYVQWLRAGFNAIGVGGRTARFDDPSLTVRGPIRPRIPPRR
                     VVFDSAADLGPQLTLVRTATEIPTIAVVAPEADPTRVKRLEGSGVTVLTAANLNEAMA
                     SLRQLGIESLLVEGGGQLAGALLAAGVVDRYYWLQAPLWLGDDAVPAIAGLPGRELNQ
                     GERWRVIERRALGQDTLLVLDRT"
     gene            complement(10108..11064)
                     /locus_tag="VGQ24_05955"
     CDS             complement(10108..11064)
                     /locus_tag="VGQ24_05955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454413.1"
                     /translation="MRAADLLAGLFLLAVVSSASAQTPECAGYVSNAQRVCAAAVDGT
                     RAFHPIVGVLISGGNPTIGTAGTLGGLGHASLTLRANAVELVLPDLSYNGSSTTVPAG
                     NKLFAPAPLVEGSLGLYKGMPTGLLAVDFLGSAQLLPTNQIDNLVVESGARKLGSIAL
                     GLGYGARIGILREIGPLPAVSFSIMRRDIPRITYGDISAGDSYSYGVDLHATNLRLVA
                     SKQLLILGLAAGLGWDKYTGDAVIRFRDPITLTPQPDVPFELSSSRGLAFVNAGLNLS
                     MLRLTGEVGYQTGKDQNLSTSFEDFDTTKGKFFAGLGLRLGF"
     gene            complement(11076..12146)
                     /gene="purM"
                     /locus_tag="VGQ24_05960"
     CDS             complement(11076..12146)
                     /gene="purM"
                     /locus_tag="VGQ24_05960"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEV8454414.1"
                     /translation="MKEAAGSVGSHGGTGQAREYAAAGVDLDTAEAAKARIGELVAGT
                     RTTLSIGQVGAFGGMIRVPPGMRKPTLVLSTDGVGTKVLVALEAGRFDTVGEDLVNHS
                     VNDILVHGATPIAFMDYLAGTALGVEQIAGIVDGIARGCRAHDMALAGGETAQMPGLY
                     RPGTFDLAGTIVGVVEEDRAIHGHAIVPGDVLLGYTSTGLHTNGYTLARRIIFDRMRL
                     QLGDVLGQTGTTVAHALLAVHRSYFRSVAPVLERMHGVAHITGGGIAGNLVRILPQDC
                     MATVDPDTWELPPLFSTLQQAGQISTQEMRDVFNLGVGLVAVLPPDAVSAAQAAASAD
                     GVTTWVMGEIQRGSRSVRFARP"
     gene            complement(12143..13063)
                     /locus_tag="VGQ24_05965"
     CDS             complement(12143..13063)
                     /locus_tag="VGQ24_05965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HEV8454415.1"
                     /translation="MTLLVVGSIALDSIFTPFGETADALGGSAIYFSVAGSILYPVQV
                     VGVVGQDYPYHELERLAPRGIDWSGVERANGESFRWKGKYSYDLQSRETLETRLGVFA
                     DFQPRLPAGFRSARFLFLGNIDPDLQLGVLEQVERPELVVCDTMNYWIQSKKAALLQL
                     LERVDVLMVNDSEARELSGDWNIHRAGRWILAHGPKRVVIKQGEHGALLIEPKRTFYV
                     PAFPLETVFDPTGAGDAFAGGFMAYLARTRSVTEDNMRRAMVYGAAMGSYAVEQFGIH
                     GFDRVTLADVESRVRAFQDLTHVSLAEALA"
     gene            complement(13068..14714)
                     /gene="argS"
                     /locus_tag="VGQ24_05970"
     CDS             complement(13068..14714)
                     /gene="argS"
                     /locus_tag="VGQ24_05970"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEV8454416.1"
                     /translation="MNDRLRTELSRVASRLGADGIEFVLERPRDAGHGDLATNLALVL
                     ARRDRANPRKTAERVLQELQLPPGLVAKTEIAGPGFINFWLADSQLADAHQRILELGA
                     AYGRSTWGAGLRVNVEFVSANPTGPLHVGHGRGAALGDAIASLLEWAGHSVAREFYVN
                     DAGVQIDKLARSLWARVREIAGYKDATIPEGGYHGEYLLENARQVLAAGGRAFAELPE
                     AEGIRRSRLLALRIQREEQDRDLELFGVKFDVTSSEQASYDSGQVDRAIALLAGRGLT
                     YESEGALWLRTSNFGDDKDRVLRKSDGSLTYLAPDIAYHIDKHDRGFDRVVDVWGADH
                     HGYIPRMRAALAALGYSPEFFDVALVQLVKVTRGGEEVKMSKRSGEFVTLRDLFEEVG
                     VDAARFFFLALPGDTQMTFNVDLAKKQTEENPVFYVQMAHARLSGIFRTAERDPESVT
                     GSLELAALPAPQDLDLLKKMIVFPEIVEKAAHERAPHRITVYLRELATAVHAWYHHTR
                     AVGAPEGESTERARLLLARAARTVLANGLTLLGISAPDRM"
     gene            complement(14711..15064)
                     /locus_tag="VGQ24_05975"
     CDS             complement(14711..15064)
                     /locus_tag="VGQ24_05975"
                     /inference="COORDINATES: protein motif:HMM:TIGR02605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FmdB family zinc ribbon protein"
                     /protein_id="HEV8454417.1"
                     /translation="MPTYEYRCPEGHVFEKFQKMAEKPRAKCPVCGKPAMRMISGGAG
                     LVFKGSGFYITDYGKDGKGPRKPESEGAPAAESKPATDTKAEKAKPEAKASSKPDAAP
                     TKPASRHGKGKAPSE"
     gene            complement(15191..15607)
                     /locus_tag="VGQ24_05980"
     CDS             complement(15191..15607)
                     /locus_tag="VGQ24_05980"
                     /inference="COORDINATES: protein motif:HMM:TIGR04256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEV8454418.1"
                     /translation="MFHHEGTKDTKGTKASGLALSHEVIGAAIEVHRLLGPGLLESIY
                     EMALCRVLWLRGIEVERQVNVPVSYKGKRLACGIQLDLLVQRTIIIELKSVEKILPVH
                     RAQLLTYLRLQELWLGLIINFNVEVLRDGVRRVLNG"
     gene            complement(15669..17204)
                     /locus_tag="VGQ24_05985"
     CDS             complement(15669..17204)
                     /locus_tag="VGQ24_05985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HEV8454419.1"
                     /translation="MKTVYGPEDWSGEPARDLGHPGEFPFTRGPYPNMYTARLWTMRQ
                     YAGFGTAQDTNRRFRQLLDAGQMGLSTAFDLPTQMGYDSDHPMAEGEVGRVGVAIDTV
                     DDLAELFREIPLDRVSTSMTINATAAILLAMYIVVGEEQDVPRAKLTGTVQNDVLKEY
                     IARGTYIYPAQPSLRLVADIFRFVADESMSFNPISISGYHMREAGATAVQEVGFTLAN
                     ALEYVGVAVAAGLTVDSFGPRLSFFFASHNDLFEEAAKFRAARRLWARLMRERFGAGD
                     STARMRFHTQTGGVTLQAQQPLNNVVRVTLQALAAVLGGTQSLHTNGYDEALALPTAE
                     SATLALRTQQVLGYESGVPQVVDPLAGSYYVESLTDQIESGARALIGEVDALGGAARA
                     IERGFFQEAIARSAYELQKAQESGERVVVGVNRFTDDSPPVSIAAPDFSVLESQQRAR
                     LAETRRRRDATAVRAALDEIKAAAAGTDPLMPPIITAVRARASLGEISDTLREVWGVY
                     RPA"
     gene            complement(17201..18241)
                     /gene="fbp"
                     /locus_tag="VGQ24_05990"
     CDS             complement(17201..18241)
                     /gene="fbp"
                     /locus_tag="VGQ24_05990"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: protein motif:HMM:NF006778.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HEV8454420.1"
                     /translation="MQTSVTTIERFILDQEDRYPEATGELSNLLYDIALASKIISAAI
                     RRAGLVNILGAAGGINVQGEEQQKLDVFANETLKNCLKHTGRVCAMGSEEDDDIIPVP
                     PEYPVGKYAVLFDPLDGSSNIDVNSAVGTIFSIYRRVSMHGRGTSADVLQPGCKQVAA
                     GYIMYGSSTMLVYTTGQGAHGFTLDPTIGEFLLSHPRIITPRVGTYYSVNESNFGRWD
                     KGIQAAVKGLKGDPPGEVTPKNSRYMGSLVGDFHRNLVAGGIFLYPADNRNPRGKLRL
                     LYEASPMAFIAEQAEGSATDGVERILDIMPESLHQRTPLVIGSREDVGFVADTLRRVA
                     ARASGAVSQPAL"
     gene            complement(18322..20583)
                     /locus_tag="VGQ24_05995"
     CDS             complement(18322..20583)
                     /locus_tag="VGQ24_05995"
                     /inference="COORDINATES: protein motif:HMM:TIGR00361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0009290 - DNA import into cell involved in
                     transformation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HEV8454421.1"
                     /translation="MVRLRPPILFTTAYGAGLATGLLHFGAPHWVVGIPLMLGMCSRR
                     ALTSVLCAALVLGRLSGEVAWIQEARSCAARLPAGPLRLSLRLLEPAESDGGRVEVEP
                     LGANCTGAVSARWPQGRASQAGLSVEVRARWIARPGRSGRPGGTLIIAEVRRIPGSPA
                     LSARLRTALTRASRRLYGARAPMVDALILGRRGGMDQALQDRFAQSGLVHLLSISGFH
                     VGVITAWIYLLCRLLRAGRARALVLAAATSVAYVAFLGWPAPAARAAALAVLVAVSRA
                     RQRQVETNALLSATCLCVLLLDPWAVLDLGAWLSASALWGATTFSRWTDHALGTAVWW
                     RTLGSSVGATLATAPITAAALGAVAIIGIVLNFIAIPVAAVAVPGVLASLLVLPFWPG
                     LASALAGGAGLALHLLELLATGGAAVPGGHVIEAAEIRSAVPWLAGLAVSLWAIGRRN
                     TLAEAVRRWSWAGVATLWAGTLWVWAPRSANAGSGLTLHFLDVGQGDGALLRTPAGRW
                     VLVDAGPRNDRSDAGRRVVVPFLASHGARELAVAIVSHAHADHLGGVPSVLDRFRAGM
                     VIEPGDQVTDPLYYEFLDELAAESIAWHRGRRGERFTLDSVRFTVLHPYEWARWGEDL
                     NEDSLVLLVEYGAFQALFAGDAGFPAEAEMRGRARAVDLLKVGHHGSRGSTGDEWLDS
                     LRPRVAVISVGQNTYGHPAAETLGRLLRHRVEVWRTDRDGLVTVTTDGQRMMVKARGR
                     SATYDVAEKQREQ"
     gene            complement(20591..20875)
                     /locus_tag="VGQ24_06000"
     CDS             complement(20591..20875)
                     /locus_tag="VGQ24_06000"
                     /inference="COORDINATES: protein motif:HMM:NF022179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="late competence development ComFB family
                     protein"
                     /protein_id="HEV8454422.1"
                     /translation="MIRNLVEDHVTAAYDTLRPHFPSFCGCELCRDDVLTFALNRVPP
                     RYVSRREGAVVTEVSLEKEQSRAAIEVIVMEALRKISVAPRCKARGGTQQ"
     gene            complement(20872..22185)
                     /gene="miaB"
                     /locus_tag="VGQ24_06005"
     CDS             complement(20872..22185)
                     /gene="miaB"
                     /locus_tag="VGQ24_06005"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEV8454423.1"
                     /translation="MLKSVYIETYGCQMNVADSELMFGVLLRNGYVRAAEPTGADVVL
                     VNTCAVRDNAEQRVIGRVGELQRYKRSGGVLGVVGCMAQRLGPALLAQVPRVDLVVGP
                     DAYRNLPELLGLAQGGQRVSDTEFRSWEHYEDVPAVRENGPTAFVTVQRGCDYRCTFC
                     IVPQTRGPERSRRLDDVVREVSALVERGTTEVTLLGQTVNSYHDGTHDFADLLRAVGG
                     VDGLRRLRFTSPYPTDFTARVIEAMATTPAVCEHVHLPVQSGSNAVLKRMLRRYSRER
                     YLEVVAELRRAIPGVTLSTDIIVGFPGETDAQFEETLSLATDADFDDAYTFKYSVREG
                     TPAVRLRDHIPDEVASDRLDRLIETVRACTRRKNIGRVGEIHEALVERPAKRGELMLA
                     RTRSNHLVLVDLPQSSTGEYHRVRLTGTTGSTFTGSVATPALAVL"
     gene            complement(22336..>22812)
                     /locus_tag="VGQ24_06010"
     CDS             complement(22336..>22812)
                     /locus_tag="VGQ24_06010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454424.1"
                     /translation="AALLRTDGQVNVDRDSARVGTVDLPYTFGLGIRLQPVGQLELGV
                     QSIVRTWSGANSDLLQQGGTGAENTFEVAAGVQYTSDPKRPYRRPIRLGVRYATLPFP
                     LLPGEQGHEVGVSLGTGMRFAQQRAGIDLALEHLWRAEGPYSERALLVSLGVSVRP"
BASE COUNT         4055 a         7738 c         7266 g         3753 t
ORIGIN      
        1 gtgtactgcg tgaggtcgtt cgtgcccacg ctgaaaaagg cgctcacctc ggcgagctgg
       61 tcggccatga gcacggcggc cggagtctcg atcatcaccc cgaccggcac cgatggagcg
      121 gcccgcacac cagcggcggc cagggctcgc gcctcttccg cgaccatgtc gcgggcctcc
      181 tggacttcct ggaccgtcgt gatcaagggc agcatcaact ggagatcata gccagcggca
      241 gcccgcagca ccgcccggat ctgcgggcgg aacacctcgg gctcgtcgag acagacccgg
      301 atcgatcgcc atcccagaaa cggattggct tctgtcggag ccttgaacgc ggcagggaac
      361 ttgtcacctc ccagatcgaa cgaccggatg atgacggtct ggtcggggaa ggctcgcgct
      421 acccgccgga agtagtcggt ctgctcatcc tcgcttggca gcacggcccg accggtgatc
      481 aggaactcgg tgcggaggag tcccacgccc tgggcgccat ggcgtacggc cgcctcgatc
      541 tcttcgggca gatcgacatt ccccatcagg ctgatcgccc ggccggacgg tgtgacggcg
      601 ggctgcccga ctaccccctc gagctgaagc tccagccgct ggcggcggct cacctgcacc
      661 cgggcatcct ccagctcatc ccggttggga tcgaggacga tggtgccgct ttggccgtcg
      721 atgagcaggg tggtaccgtt ggggatgact gcgagcgcgc cggctgcgcc catgacggcc
      781 gggatgccga gcgaatgggc caggattgcg gcgtgggcgg tgcgggttcc ctcctcactc
      841 accagcccga ctacgtggtc tcgatcgagc tgcaccgtca ggcccggtga cagctcgtgc
      901 gccacaacga tcacctgctc atcggcaggg atcgaccaga gctcattgtc agtgcggccc
      961 agcagtcgct ggatcattcg catctgaatg gcgtggagat cggcgagccg atcacggagc
     1021 cgggcagcgc tcgaccagtg ctggcgaagc tcaagcgccc tgaactcgta cgccgtttcc
     1081 gcgctgaact ggttcttccg gatgagggtc tcgaccgact tgaggaactc ctcgtcctgg
     1141 gccatcagaa tctgagcatc gaagatccgc gattcttccg ggccggcacg ctggagcacc
     1201 cgttcgccca gtccttgaag atgcgagacg acgtagtcga cggcttcccg gaggcgttgc
     1261 acctcgccct cgatctcgcc ggcggtaacg gtgcggtcgg ggacctgggg gaagtcccat
     1321 cgcatcacca gggccggagc ccaggctaca cccggcgaga ccccgattcc acggagcagg
     1381 cggggtccgc tcattgctcg ccgaagccat cggcgacgag cgcggccaga gcctccgccg
     1441 cctgctcggc gtcgggacct tgcgcccgga tggtgatgga gctgccgcat tcggcggcca
     1501 gcatcatcac gcccatgatg ctcttgccgt tcacacccac cccgtccttg aggatctcga
     1561 tctccgagtc gaaggtactg gccagccgga caatccgggc cgcgggtcgg gcatgcagcc
     1621 cttccgagtt gacgatggtc gccgcgcgct cgatcacagt ccgatccgcc ggaatagaag
     1681 cagaaggagg atggccagca acgcaaagcg caccgatgtc agggccgggc cgaaccaacg
     1741 ggtgagggcg atccccgcca cagccacgcc ggcggtgccg atggcggccg cccaaccgaa
     1801 gtccgtcagg taccagactg ccacggctgg aatcgaggcg cccagcgcga aacccgccgc
     1861 ggggccgacc cgctcgatgg cccgcggcag ccaggagctt ccaatggcag caccgacccg
     1921 catccccgtc tccatcccgg tgcggagcga ccaatagctg gtccacaggc gaaccgcgtt
     1981 gtagatcacg aggaacccac cgatcgccca ccatcctgct cccaacacca cggcaatgag
     2041 ggcaaagccg accagcgccg gaaccagtcc agcccagaac agctgatcgc cgagcgcgcc
     2101 gagagggctg cagagcgccg tccgaagccg cacgatctgc gcgccgggta ccgcttcgta
     2161 ctctgcccgg gcggtggccc cgagcgcgag cccggcgagg ttggggttgc agttgaagaa
     2221 ctcggcagat cgcacgacgg cttcgccgtg gcgcacgggg tccaccgcct tgagatcctc
     2281 gagcagcggc tcggccgcgt atcccatccc tacgccgagc atacgttcgt aattccaggt
     2341 gccctggacc gcgaacagcc gcagcatggc ccggagacgg ccgttcatgc gagcaccgcg
     2401 atcagcgttc ccacgaccag tccacccacc agccacttga gcctgtcacc ccgtcccgag
     2461 cttcgaaatg cagcgctgcc gccggccgat aatgcggagc cgatggagac cagcgtgagg
     2521 gccaccgcag tctggcggtc gacccgcagc gagtctgtga tcgtcgaggc gagaatcagg
     2581 cccagcaagg tgaggatgag gccgcgaacc gcgtcgcgca ggaggccgcc gtactggagc
     2641 caccggattg cactgctctc acccgcagac aaggccgcgg ccttgcgttg tatggcacgg
     2701 gcattccacc ggcgcaccac ctgaaggctc cagcccccga ctacggcgag caccagacca
     2761 agagccgcgc tgacgccgag gctgagctcc cagggagttc ccgccgcgag cgccgccgcg
     2821 acgaccgttg ccgggccgta gtctggatag cggaccgctc ccaccggcag gatatcgagg
     2881 gcgaacagct cgaagaggac gccgatcctg agacccgcct ccgtgtcacc cgcgagccag
     2941 cccgccaccg ttccggccac caacggcctg gagatcatcg cctggggcac gctgaccagg
     3001 tcgaggccta ccagactgcc ccagaccagc agcggcacga cgacatgggg agagaactcg
     3061 gtcatgggag gctcctcaac gccaccggag gggtggtggg aagatcctgc gccgtgatga
     3121 cggcaccccc cgcctcgagg tcgagcaacg tacgaagctc ctggtccgtg agataaagga
     3181 aggggaggcg ttcgcgacgg cccggtcgat ggtggatccc gccaagattg atcttgtgga
     3241 ccagcaaagg actggcggca tgcagggcgg ccatggtctc caggtctccc gtcagcacca
     3301 ggccccgttt cccgttggcc tgccagtccg ccatctgcct ggacgcttcg gccacggtga
     3361 cgaacctgac ttcgatctcg ggtgccaccg ccatacgata gagctcctgc tcccaatcgc
     3421 tggccgcgac ctgatcatcc accagaatga tgagatcgat gctcagggca cggccccacc
     3481 cgatcacgac ctgtccgtgg atgagccggt cgtcgatccg gcagagcacg atggacatca
     3541 gggcagcctg atagacgctt ggccgatggc agcggcccgg gaggcagccg cttcgggaga
     3601 gagcgagcgg tggaagacga aatccaccag catcgcgagg ttcaccccgg tcaccaccct
     3661 cacggcgtcg tcggcccgga gacgcttgag gacggcaacg aggcaggagc cactggccat
     3721 gtccacgaag accaccgcgg gatgctcatc cacggcggcg agtactcgct gctcgagcgt
     3781 gtcgcggtcg cagccgatgt tcgacaccgg aatcagtgcg gcgtccacac cgctgatctg
     3841 cgccgccgcc tgcaccaggg cacccgccag ggccgcatga cacaccacca cccctcgcaa
     3901 ctcctcactc ataatcttcc tggagatact cccgcacccc gcgctgatcc ttcatgcgct
     3961 tgatcagccg ggcattgaat gcggccgcca cgtccacgcc ggagtagcgc aggaggtgca
     4021 tcatcgccac gacctcggag atgacggtga tgttctttcc gggattgagg ggcacgacga
     4081 cccgggggac agccacatcg agaatcgtgg tttcctcccg agccaggccg gtgcggtcgg
     4141 catccttggc tgtctcccag tcctccagct ggaccaccac ctcgatgcgc ttctgctgcc
     4201 ggacggcgcg gacgccgaac agtgcgggaa tgtcgatcag gccgatgccg cggatctcca
     4261 tatgatgcgc ggcgagctcg tgtccccgtc cgatgagcac gtcgttgccc cggcgggtca
     4321 cctgcaccac gtcatccgcc accagccggt gaccccgttc cacgaggtcg agtacgcatt
     4381 cgctctttcc gattccggaa cggccgacga agagcaagcc gacgccgtag acgtccgcca
     4441 gcgaaccgtg gagcgtggtt ctgggagcaa aggcctcttc gacgatcggc ttgatccggc
     4501 gataaaactc cgcggtcttg agcttgctgc ggaggacggg aactcctttg gaccgcgcca
     4561 gctccagcat ttccgaaggg atctcctgtc ccttggtcac gaaaatgcaa aacaggtcga
     4621 agctgaagaa cttctccagc gatttcttac gctcctcgag cgtaagcgag ttgagatagg
     4681 tgatctccgt ttcaccgaag acgtggagcc ggttgggcgc gaagcggccg gtgtagcccg
     4741 ccagggcgag tccgggccca gccacctcgg cctcgggcat ctggcggtcc aaaccaagct
     4801 cgccggtcag cggctcgagc tggagcggat caccgcgccg ggagagaaaa tcgccgagcg
     4861 ggagcatcag agcgggttct tcgtcgggga cgaacgtgct ctgcgcggcc gatcggaggc
     4921 acgctcgacc tgccgccgca gcctctcctc ggcccgatcg agcgccgtgc ggtggtcggc
     4981 tccctcgccc ctggccacca ggatctcgcc tcgcgccatg tgaagccgaa gctcggcggt
     5041 ctgctccagg ccatcggtgt cgaacacgac ggtcatctcc atcggtcgcg gcgtcacctt
     5101 ccccagacgc tccacgacag tgatcgcgcg ctcgcgcagc ccctcaggga tctcgcagtg
     5161 ccgggcggtg atggtcgttt ccatgatcgt tcctccgggc tcagccatca gttgggccct
     5221 cgatgatgtc tttcaaatga cgctccgttg cggcggcggt ctgttcccag ggcagacttt
     5281 cggcaaacct ccgtgcccgc tcgcccaggc gcgcaaccaa cggcggtgaa tcggccagct
     5341 ccaccattct ggcggccaga ccctcgacat cgccgtgcgg taccaggtat ccggtttccc
     5401 cgtgcctgac cgagtcacgt aacccggggc tctccgacgc gagtgatggg gtgccgcagg
     5461 ccgccgcctc cattacggtg atcccccatc cttccttggg cgagggaaag acgttggccc
     5521 atgcagtccg catgaggtcg atcttccgct cctcgctgac gaaaccgtgg aaggtgacgg
     5581 cccgatcgag ctcgaggctc gcggccagct gctcgagctc atcccggcag tcaccggtcc
     5641 ccgcgatctc gaggcgaagg tcggggcggc ggcggcgggc aagggcgaga gcgcgaaggg
     5701 caagccctac ccctttataa tgcttcaacc gaccaacata caagaaggta ggtgtggccg
     5761 agcggcgtcc tcccggggcg ggggtgaagt gtctgctgtc cacccctgga tggattaccc
     5821 gaatgcgatt ccggggaacc ccccgggcca ccaggtcgtc gcgcgtgctc tcactgatcg
     5881 catggaatcc cgcgcgccgg tacgcccacg gcagcggccg ctcggcagcc cagaccgccg
     5941 tggcgatcgg ccacgacgcc tcatcgaacg cagtggtgcc gaacaggtgc ggtacgatgg
     6001 cgcagaacgc caccttcgtg cccagggtga ggaacagcgg aagcttgttc acatcctcga
     6061 ccaggatgtc cggtcgctcc gctcggatag cacggcggac agctcgccgg ctcaacaggg
     6121 caaaactatt ccgccttccc acccgctcga cgctgatccc ttcgatgctg gcgcggggtg
     6181 gcgctccctc ccagccggag cacaccagcc gtacgcggtg cccggcagca gctaggcggc
     6241 cgaagatctc gaagaggtgg atctcggctc cgccggcgtg gggattcgcg cggtcctgcc
     6301 agttgaccag gaggatgttc acgatccgat gagcacgcgt ccgagcgtta cagccgcccg
     6361 agcgagcggg cgaccccatc gaggatgccg ttcacgaagc cgggcgcgcg tacatccccg
     6421 aaccagtgcg ccaggtggac cgcctcgtcg atggcgacct tgggaggtac ctcgccccgg
     6481 cgcagctcgt gaatgcccat tcggaggata ttccgctcca ccacagccat gcggtccatg
     6541 cgccagttct ccgacgcgcg cgaggcctgg gcatccagga tttcgatttc cgagacgatg
     6601 ccggccgcca gcgcttcagc ccggtcgaag atacgtggct cgggaccggt gagccgtgcg
     6661 aggccagtgg ccaccctcga gatcggcggg gcgccctgaa gctcccacgc gtacaggatc
     6721 tgcaacgcgc gggcgcggct cttagtctct ggtctgagca tgatatgccc gtacctgggc
     6781 cagtacatct gcggtctgca aggcggcggc cgccgcttcg tatcccttat tccccgcact
     6841 gccacccgcc cggtccaccg cctgttgcat ggtatctact gtgagcacgc cgaagccgac
     6901 cggaagtgca tggcgcaccg ccacgtcgct gaggccgcga gcggtctcac cggccacgta
     6961 gtcgaagtgg ggcgtctcgc cccggatcac agcgccgagc gccaccagac acgcgtaggc
     7021 atgggagtcc gccgcggcag ccgccgccga gggaagctcg aacgctccgg gcacccacac
     7081 cacgtcaatc tggtcccgag ccagtccggc ttccccgcag cacgtaaggg ctccctcgag
     7141 cagtcgcttg gtgatcagct cattgtagcg gcttaccagg atcgccactc gcccggacga
     7201 gcggaggcga ccggagaagt cgggcacggt gtcagtgcgt gaagaggtgg ccgagcttgt
     7261 ctcgcttgac ctgaaggtag gtgtgattct cgtggttggg gtcggccagc agcggcacgc
     7321 gttccactat ctccaggcca taaccctcga ggccgaccag tttgcgggga ttgttggtca
     7381 tgacccggat ggaggagagc cctagatcgc gcaaaatctg cgcgccgatg ccatagtttc
     7441 gaaggtcggg agcgaagccg agacgctcgt tggcctgaac cgtgtcagcg ccgttgtcct
     7501 ggagcgagta cgcgcggatc ttgttgagca ggccgatgcc gcgtccctcc tgatcgaggt
     7561 acacgaccgc acccttgcct tccctggaga tcagctccat tgcgcggtga agctgaaagc
     7621 cacaatcaca gcgctgggag ccgaacacgt cgccggtcag gcatttggag tgcatccgca
     7681 ccaggatgtt cgcctgaccg gcgatgtctc catacaccag cgccacgtgc tctgccttgt
     7741 ccacgtcgtt gcggtaaccg atgatggtga actcgccgaa ctcggtgggg atcctggcct
     7801 ccgctacccg gtgaaccagc tgctccgtcc tcaggcgata cgcgaccagt tgcgccacgg
     7861 tgacgaaggt gagcccgtgc tgttgcgcga tatcctgcaa ctggggacgg cgcgccatcg
     7921 acccatctgg gttgaggatc tcgcagatca caccggccgg attgaggccg gccaaccggg
     7981 cgagatcgac gctggcttca gtctggccga cccgctggag cacgccaccg ggccgggccc
     8041 ggagggggaa gatgtgcccc gggcgacgca agtcggatgg aactgttgcc gggttgatcg
     8101 ccacgtgaat ggtggtggcg cggtcagtgg ccgagatgcc ggtggtgacg ccgaatcgcc
     8161 gctgggcgtc gatgctgacg gtgaacgcgg tggacagctc ctcggtgttc cgctccgtca
     8221 tctgcgacag gccgagctga tcgcaacggt caccggtcag ggccagacag atgagaccgc
     8281 gcccctggag ggtcatgaag ttgatcatct cgggcgtagc aagctccgcg gcacacacga
     8341 gatcgccctc gttctcgcga tcttcgtcgt ccgcgacgat gatgatcttg ccgttccgca
     8401 gatcgtcgat cgcctgctcg atcgtcccga aagtcgtcac cgtctctcct ccatcagccc
     8461 cgccacgtat ttgccgatcg tgtccgcctc gaggtgaacc cgatcgcctg cccggcgctc
     8521 acccagagtc gtgtgctgta aagtaaacgg aatcagtgag atctggatca cacgagggcc
     8581 gggtatggca ttcacggtca ggcttacccc atccaccgtg atcgagccga gcgggaccga
     8641 cacacgggca acctcctcgg gtgcctcgat atccagcagc ctggcatcct gctgctggac
     8701 tacctgcact acttccccga caccatccac gtggccttgg accagatggc cgcccaaccg
     8761 gtcgctcatc cggagcgccc gctccagatt cacccgccgt ccctcggcgt agtctcccag
     8821 gcgagtgcgc tcgagcgagg tggggactac atgaaccgta aaccctcccc gctgaatcgc
     8881 ctgcaccgtg agacaagcgc cgtccaccgc aacgctttct cccagctcga gatcggagaa
     8941 ggagcacgcg atggtcaact cgaggccgcc ggcggtacgc ctggtgtgct gcaccgttcc
     9001 gacatcggtg atgatcccgg tgaacatcag gtccgatcca gaaccaggag ggtgtcctga
     9061 cccagtgcac ggcgttcgat gacgcgccac cgctcgccct gattcagctc acggcccgga
     9121 aggccggcaa tagccgggac cgcatcgtca cccaaccaga gcggtgcctg cagccagtag
     9181 taacggtcca ccacgccggc cgccagcagg gctccagcga gctgcccacc accctcgacc
     9241 agcagagatt cgatgccgag ctgccggagc gaggccatcg cctcgttgag gtttgcagcg
     9301 gtaaggacgg tgacgccgga gccttccaag cgctttaccc tggtcggatc ggcttcgggc
     9361 gcgacgacgg cgatcgtggg gatttcagtt gcagtgcgta ccagtgtcaa ctgcggcccg
     9421 agatcggccg cactgtcgaa gaccacccgc cggggtggga ttcgggggcg tatcggcccc
     9481 cggaccgtaa gggaggggtc gtcgaaacgg gcagttcgtc ccccgactcc gatcgcattg
     9541 aagcctgccc ggagccactg gacgtactcc cgggcctcct cacccgatat ccagcgagag
     9601 cggccgaacc cgtcggcgat gcgtccgttc agcgttgtgg taagcttcag cgcgacgaaa
     9661 ggccggctcg ggttacggag cgtgtgcaga aagatcgcat tctgcgccgc ggccgcgtcc
     9721 tccgccgctc ccagctcgac ctcgacccca gcgctccgaa gctgttcggc tccaccggct
     9781 gcgaccgggt tcggatcccg cagtgcggcg accacccggc ggataccagc gtgaatgatc
     9841 gcctgggtgc acggcggctg tttgccttga tgcgaacagg gctcgagggt gacgaccatg
     9901 gtcgccccgc gagccctgtc acctgcaccg gcaagcgcca ctgcctcggc gtgccggtcg
     9961 ccgaattccg ggtgccaccc ctggccgacc agctcaccgt cccggaggac tactgcaccg
    10021 acgagcgggt tcggctggac ccgcccccaa cctcgccagg cgaggtcgag ggcttgggcc
    10081 atggcctcct gctcgttcac ccgctcgcta gaagcccaat cgcaggccga ggccggcgaa
    10141 gaacttcccc ttcgtggtgt caaagtcctc gaagcttgtg ctcaggttct ggtccttgcc
    10201 ggtctgatat cccacttcac ccgtcaggcg caacatggac agattcaggc ctgcgttgac
    10261 gaaggccagc cctcgcgagc tgctcagctc gaacggcaca tccggctggg gggtgagcgt
    10321 aatcggatcg cggaagcgga tgactgcgtc gccggtgtac ttgtcccatc caaggccggc
    10381 ggcaaggccc aagatcagca gctgcttgct ggccacgagc cggaggttgg tggcgtggag
    10441 atccacgccg tagctgtagg agtcgcccgc gctgatgtcg ccataagtaa tccggggaat
    10501 gtcccgccgc atgatgctga atgagacggc cggcagcggg cctatctcgc gtaagatacc
    10561 gatgcgggca ccgtacccca gacccagcgc gatcgagccc agcttccggg cacctgactc
    10621 caccacgaga ttatcgatct gattggtggg gagcagctgc gccgagccga ggaagtccac
    10681 ggcgagcagg ccggtcggca ttcccttgta gaggccgagg gagccttcga ccagtggggc
    10741 gggagcgaag agcttgttac cggcaggcac cgtggtgctg ctgccgttgt agctcaggtc
    10801 cgggagcacc agctccaccg cgttagcccg aagggtcaac gaggcatgac caaggccgcc
    10861 cagcgtgccg gcagtcccga tcgtcggatt ccctccgctt atgagcacac cgacgatggg
    10921 atggaacgcg cgagtgccgt cgacagccgc ggcgcacacc cgctgggcgt tcgacacgta
    10981 tccggcgcac tccggggtct gggcgctggc ggaggagaca acggcgagga ggaacagccc
    11041 ggcaaggagg tcagcggcgc gcatcgtatt ctccgttacg gacgggcgaa acgcacggac
    11101 cggctgcctc gttgaatctc gcccatcacc caagtggtga ccccatcggc cgaagcggcc
    11161 gcttgagcgg cgctgacggc gtccgggggc agtacggcga cgagccccac gcccaagttg
    11221 aagacatccc gcatttcctg ggtggagatc tgccccgcct gctgcaatgt gctgaagagc
    11281 ggcggcagct cccacgtatc cggatctacc gtcgccatgc agtcttgagg caatatccgc
    11341 accaggtttc cagcgatacc tcctcccgta atgtgtgcca cgccgtgcat ccgctcgagc
    11401 accggggcaa cgctgcggaa gtagctgcga tgcaccgcaa ggagagcatg agcgacggtg
    11461 gtaccggtct ggcccagtac atccccgagt tgcaaccgca tgcggtcgaa aatgatgcgc
    11521 ctggccaggg tataaccgtt ggtgtgcagt ccggtcgagg tgtagcccaa caacacgtcc
    11581 cccgggacaa tcgcgtgtcc gtgaatcgct cggtcttcct cgacgacacc gacaatcgtg
    11641 ccggcgagat cgaatgtccc gggacgatat aggccaggca tctgggccgt ttctccacct
    11701 gccagcgcca tgtcatgggc cctgcaccct cgcgcgatgc cgtctacgat tccggcgatc
    11761 tgttccacgc cgagcgccgt cccggcgagg taatccatga acgcgatggg cgttgctcca
    11821 tggaccagga tgtcgttcac actgtggttg accagatcct cgccgacggt atcgaatcgc
    11881 ccggcctcga gcgctaccag gaccttggta ccgactccat cggtactcag taccagggtt
    11941 ggcttccgca tccctggagg aacccggatc atgcctccga aggccccgac ctgtccgatc
    12001 gacagcgttg ttcgggttcc ggcgacgagc tcgccaatcc gcgccttggc ggcttcggcc
    12061 gtgtccaggt cgacgccggc ggcggcgtac tcccgagcct ggcccgtgcc gccgtgcgag
    12121 ccgaccgaac cggcggcctc tttcatgcca gcgcctcggc cagggagacg tgagtgaggt
    12181 cctggaaggc ccgcacccga gactccacat cggcgagagt aacccggtcg aacccgtgga
    12241 tgccgaactg ctccacggcg taggatccca tggcggcgcc gtataccatg gctcgccgca
    12301 tgttgtcctc cgtcaccgac cgcgtccgcg ccaggtaagc catgaaaccg cccgcgaacg
    12361 cgtcgcccgc gccggtggga tcgaaaaccg tttccagcgg aaaggcgggt acgtagaagg
    12421 tgcgcttggg ctcgatcagc agcgcgccat gttcgccctg cttgatgacc acgcgcttcg
    12481 gaccgtgagc caggatccac cggccggcgc gatggatgtt ccagtcgccg ctcagctctc
    12541 ttgcctcgct gtcattcacc atgaggacgt ctacccgctc gagcagctgg agcaacgcag
    12601 ccttcttgct ctggatccag taattcatcg tgtcacacac caccagctcc gggcgctcga
    12661 cctgctccag gacgccaagc tggaggtcgg ggtcgatgtt gccgaggaag aggaagcgcg
    12721 cagatcgaaa gcccgccggg agccggggct gaaagtcggc aaacacgccg agtcgcgtct
    12781 ccagggtctc gcgactctgg agatcgtagg agtacttgcc cttccaccgg aagctttccc
    12841 cattcgcccg ctccacgccc gaccagtcga tgccgcgagg ggccaggcgc tcgagctcat
    12901 ggtaggggta gtcctgcccc acaaccccga ccacctggac gggatacagg atcgagccgg
    12961 ccacgctgaa atagattgcc gacccgccca gcgcgtccgc ggtctcacca aatggagtga
    13021 agatcgagtc taacgcgatg ctgccgacca cgagcaaggt catcgagtca catccggtcg
    13081 ggggctgaga tgccgagcag ggtgagcccg ttagcgagca cggtgcgggc ggcccgggcc
    13141 aggaggagtc gtgcgcgctc ggtgctctcg ccttcgggtg cccccaccgc cctggtgtgg
    13201 tgataccagg cgtgaaccgc cgttgcgagc tcgcgcaggt acaccgtgat ccgatgaggc
    13261 gcacgctcat gcgcggcctt ctccacgatc tcgggaaaga cgatcatctt cttcaggaga
    13321 tccaggtcct gcggcgcggg cagcgccgcc agttccaggg acccggtcac cgactccggg
    13381 tcgcgctcgg cggtgcggaa gattccgctg agcctggcgt gcgccatctg cacgtagaaa
    13441 accggattct cctcggtttg cttcttggcc agatcgacgt tgaaggtcat ctgggtgtca
    13501 cccggaagcg ccaggaagaa gaaccgggcg gcgtcgacgc ccacctcctc gaagagatcg
    13561 cgcagggtga cgaactcgcc cgaccgcttc gacatcttca cctcttcgcc gccccgagtc
    13621 accttgacca gctgaaccag ggccacgtcg aagaattccg gcgagtaccc gagcgcagcg
    13681 agcgccgctc gcatgcgggg gatgtagccg tggtggtcgg ctccccacac atccacgacc
    13741 cggtcaaagc ctcggtcgtg cttgtcaatg tgataggcga tgtcgggagc gagatacgtc
    13801 aggctcccgt cgctcttgcg cagcacgcgg tccttgtcgt ccccgaaatt cgaggtgcgg
    13861 agccagaggg ctccctccga ctcgtatgtg aggccacgtc cggccagcag ggcgatcgcg
    13921 cgatcgacct ggccgctatc gtaggaagct tgttcggagg aggtgacgtc gaacttgacg
    13981 ccgaagagct cgagatcgcg atcctgctcc tcccgctgaa tccgtagcgc cagcaggcga
    14041 gagcgccgaa tgccttccgc ttccgggagc tcagcgaacg cccgacctcc agctgcgagc
    14101 acttgtcgcg cgttctccag cagatactcg ccgtgatagc cgccctcggg gatcgttgcg
    14161 tccttgtagc ctgcgatctc gcgcaccctc gcccacaggc tccgcgccag cttatcgatc
    14221 tgtacgccgg cgtcgttgac gtagaactcc cgggcgaccg agtggcccgc ccactcgagc
    14281 agtgatgcga tggcgtcgcc cagggcggcc ccgcgtccgt gccctacgtg cagcgggccg
    14341 gtcggattgg cggacacaaa ctcgacattg acccggaggc ctgcacccca ggtggatcgt
    14401 ccgtaggcag cgcctagctc gaggatgcgc tggtgagcgt cggccagctg cgaatcagcc
    14461 agccagaagt tgatgaaccc cggcccggcg atctccgttt tggccaccag gcccggggga
    14521 agctgaagct cctgaagcac gcgctcggcc gtcttgcggg ggttggcccg gtctcggcgc
    14581 gcgagcacca aggcgagatt ggtggcgaga tcgccgtgcc cagcgtcgcg agggcgctcc
    14641 aagacgaact cgatcccatc ggcacccagc cgcgaggcta ccctcgacag ctcggtgcgc
    14701 agccgatcgt tcactcggag ggggccttcc ccttgccgtg gcgggaggca ggcttggtgg
    14761 gagctgcgtc cggtttcgac gacgccttgg cttcgggctt ggctttctcg gccttggtgt
    14821 ccgtcgcagg cttggactcg gcggccggtg cgccctcgct ttcgggcttt cgcggtcctt
    14881 tgccatcctt gccgtagtcg gtgatataga agccgcttcc cttgaacacc agaccggcgc
    14941 caccggaaat catccgcatg gcgggcttac cgcacaccgg gcacttggcg cgcggtttct
    15001 cggccatctt ctgaaatttc tcgaagacgt gcccctcggg gcaccggtat tcataggtcg
    15061 gcatgttggt ccggtatgat ggtaaacgac aacgactagt aaacttaccg agccatctga
    15121 gagggtacaa gcagcccaaa gcctcggatg attgcttacc acgaaggcca cgaagctcac
    15181 aaagcataga tcagccgttc aagacccttc gtacaccgtc cctgagaacc tccacgttga
    15241 agttgattat gaggccaagc cagagctctt gtagtctgag ataggttaac agttgtgctc
    15301 tatggaccgg aaggatcttc tcaacggact ttagttcgat aatgattgtc cgctgcacta
    15361 gcaggtcgag ctggatgccg caagctagtc gcttaccctt gtagctgacc ggtacattga
    15421 cctgtcgctc gacctcaata ccccgaagcc aaagcaccct gcagagtgcc atctcgtata
    15481 tggactcgag tagtcctggc cccagcagac ggtgcacctc gatagcagct cctatcacct
    15541 cgtgggacaa cgccagacct gaggcctttg tgcccttcgt gtcctttgtg ccttcgtggt
    15601 gaaacatcac ctagccttag gactgccaac cggctacgcc aaacgtatcg acgcgacagg
    15661 gaccgacctc acgcaggccg atacacgccc cagacctctc gcagggtatc gctgatctcg
    15721 cccaggctcg cccgtgcccg gaccgcagtg atgatcgggg gcatgagcgg atctgtaccg
    15781 gcggcggcgg ctttgatctc atcgagggcc gcccgtaccg cggtggcatc gcgccgccgc
    15841 ctggtctcgg ccagcctggc ccgttgctgg gattcgagca ccgagaagtc gggcgcggca
    15901 atagagaccg gcggcgaatc atcggtgaac cgattcactc cgaccaccac tcgctcaccc
    15961 gattcctgcg ccttctgcag ctcgtaggcg ctccgcgcga tcgcttcctg aaagaacccc
    16021 cgctcgatgg cccgtgcggc gccgccgagc gcatccacct cgccaatcag cgcgcgagca
    16081 cctgattcga tctggtcagt gagggactcg acgtagtagc tgcccgcgag cgggtccacc
    16141 acctggggca cgcccgactc gtatcccaac acctgttggg ttcgcagggc cagtgtggcc
    16201 gactccgccg tgggcagcgc caaggcctcg tcgtaaccat tggtgtgcag agactgggtc
    16261 ccacccagga cggcggcgag ggcctgcagg gttacccgga ccacgttgtt cagcggctgc
    16321 tgcgcctgca gcgttacgcc ccccgtctgg gtgtgaaacc gcattcgggc cgtgctgtct
    16381 ccagccccaa accgctcccg catcaggcgg gcccacaacc gccgggccgc ccggaacttg
    16441 gccgcttcct caaacaggtc gttgtggctc gcgaagaaga aggagagccg cggcccgaaa
    16501 ctgtctacgg taagacccgc cgcgaccgct acccccacgt attccagggc attggccaga
    16561 gtaaatccga cctcctgtac tgcggtcgct cccgcctctc gcatatggta gccgctgatc
    16621 gagatcggat tgaagctcat cgattcatcg gccacgaacc ggaagatgtc cgccaccaat
    16681 ctgagagacg gctgggccgg atagatgtag gtcccccgcg cgatgtactc cttgagcacg
    16741 tcgttctgca ccgtgccggt gagcttggca cggggaacat cctgctcctc ccccacgacg
    16801 atgtacatcg ccagcagaat cgccgcggtc gcgttgatcg tcatcgaggt agatacccgg
    16861 tccagcggaa tctcgcggaa cagctcggcc aagtcgtcca ccgtatcgat ggcgactccg
    16921 acccggccca cttccccctc ggccatcggg tggtcggagt catagcccat ctgggtgggc
    16981 agatcgaagg cggtcgagag ccccatctga cctgcgtcaa gcagctgacg gaaacgtcgg
    17041 ttggtatcct gtgcggtccc gaagccggcg tactggcgca tggtccagag ccgcgcggtg
    17101 tacatgttgg ggtagggacc acgggtgaag ggaaactcgc cggggtgtcc gaggtctcga
    17161 gcgggttcgc cgctccagtc ctccggcccg tagaccgtct tcacaaggcg ggctgcgaga
    17221 ccgcgccgct ggcgcgagcg gcgacccgcc gaagagtatc ggcgacgaag cccacgtctt
    17281 cccgcgatcc gatcaccagc ggcgtgcgct ggtgcagcga ctccggcatg atgtcgagga
    17341 tccgctcgac cccatcggtg gcggagcctt ccgcctgctc agcgatgaac gccatcgggc
    17401 tggcctcgta cagcagccgg agcttccctc gtgggttcct gttgtcggcc gggtagagga
    17461 agatgccgcc ggcaacgaga ttgcgatgga aatccccgac cagagaaccc atgtagcggc
    17521 tgttcttcgg cgtcacctca ccggggggat cgcccttcaa tcccttcaca gctgcctgga
    17581 tccccttatc ccaccgtccg aagttgctct cattcacgct gtagtacgtg cccacccgag
    17641 gggtgatgat cctcggatgg gagagcagga actcgccgat cgtggggtcg agggtgaagc
    17701 cgtgcgcacc ctgaccggtg gtgtagacca gcattgtgct cgagccgtac atgatgtagc
    17761 cggccgccac ctgcttgcag cccggctgca gcacgtcggc cgacgtgccc cgcccatgca
    17821 tgctcacccg gcgatagata ctgaagatgg tcccgaccgc cgagttgaca tcgatgttgg
    17881 atgagccgtc cagggggtcg aacagcaccg cgtatttgcc gaccggatat tcgggaggaa
    17941 ccgggatgat gtcgtcgtcc tcttccgagc ccatcgcgca tacccgcccg gtgtgcttca
    18001 ggcagttctt gagggtttca ttggcgaaga cgtcgagctt ctgctgctcc tcaccctgga
    18061 cgttgatgcc gcccgcggcg ccaagaatgt tgaccaggcc ggcccggcgg attgccgcag
    18121 agatgatctt ggacgcgagg gcaatgtcat acagcagatt ggaaagttcg cccgtagcct
    18181 cggggtagcg gtcctcctgg tccagaataa aacgttcgat ggtcgtgact gaagtctgca
    18241 agaaacctcc tctcaaagag cgtcaacggt gaaccgtgaa cagtgaacag gtcctggcgg
    18301 gttccgttca ctgtttaccg tttactgttc acgctgtttc tctgctacat cgtacgtggc
    18361 cgagcgcccc cgagccttta ccatcattcg ctgcccgtca gtcgtgacgg tcaccaggcc
    18421 atctcgatcg gtgcgccaca cttcgacccg gtgcctcagc agccgaccta gtgtttccgc
    18481 ggcggggtgt ccgtacgtgt tctgccccac cgatatcacc gccacccggg gccggagcga
    18541 gtcgagccac tcgtcacccg tgcttccccg gctgccgtga tggcctacct tgagcaggtc
    18601 tactgcacga gcccgtcccc gcatctccgc ttctgcgggg aagcccgcat caccggcgaa
    18661 gagcgcctga aaggcgccgt attccaccag cagcaccagc gaatcctcat tcaggtcctc
    18721 gccccagcgc gcccactcat aggggtgaag aaccgtgaag cggacgctgt ccagcgtgaa
    18781 ccgctctccc cggcgcccgc ggtgccaggc gatcgattcg gcggccagct cgtcgaggaa
    18841 ttcatagtac agcgggtcgg taacctgatc gccgggctca atgaccatcc cggcacgaaa
    18901 ccggtcgagc acgctgggaa cgccgccaag atggtcggca tgtgcgtggg agacgatggc
    18961 caccgcgagt tcccgtgcgc cgtggctcgc gaggaacggc actacgacac ggcgtccggc
    19021 atcactccga tcgttcctgg ggccggcatc gacgagaacc catcggccgg ccggggtccg
    19081 cagcagcgcc ccgtcaccct ggcccacgtc gagaaaatgt aacgtcagtc cggagcccgc
    19141 gttagccgat cgcggggccc agacccacaa ggtgccggcc cagagggtcg cgacgccggc
    19201 ccagctccaa cgccttaccg cctcggccaa ggtattccgc cggccaatgg cccagaggct
    19261 cacagccagc cccgcgagcc aggggaccgc agagcggatt tcggcagcct cgatgacatg
    19321 accgccggga accgcggcac ccccggtggc gagcagctcc aggaggtgaa gcgctaagcc
    19381 cgcaccgccg gcgagcgcac ttgccagacc gggccagaag gggaggacca gcagactcgc
    19441 cagcactccc gggaccgcca cggcggccac cggtatggcg atgaagttga gcacgatccc
    19501 gattatggcc accgcgccga gagcggccgc cgtgatcgga gcggtcgcga gggtggcgcc
    19561 gactgacgat ccgagcgtcc gccaccagac cgcggtgccg agtgcgtggt cggtccagcg
    19621 gctaaaggtg gttgcgcccc aaagcgcaga ggcggagagc caggcgccga gatcgagtac
    19681 ggcccagggg tcgagcagga gcacgcacaa gcaggtggcg gagagaagcg cgttggtctc
    19741 cacctgtcgc tgccgcgcac gactgacggc aacgagcacc gccagcgccg cagccctggc
    19801 agccggggcc ggccacccga gaaacgcgac gtacgcgaca ctagtagcgg cagccagcac
    19861 cagggcccgg gctcgtcccg cgcggagcag gcggcaaagg aggtagatcc atgcggtaat
    19921 cacgcccacg tggaacccag agatcgatag caggtgcacc aacccggact gggcgaatcg
    19981 atcctggagc gcttggtcca tacctccccg ccgtcccagg atcaatgcat cgaccatcgg
    20041 tgcacgtgcc ccatagagcc gccggctggc ccgggtcagc gcggttcgaa gccgagccga
    20101 gagagcagga ctcccgggta tccggcggac ttccgcgatg atcagcgtgc cgccggggcg
    20161 gccggaccga ccgggacgcg cgatccagcg cgcgcgtacc tccacgctga gcccagcctg
    20221 actcgctcgt ccttgcggcc atcgggccga taccgcgcca gtgcagtttg ctccgagcgg
    20281 ctccacttcc acgcggccgc cgtcggactc agcgggctcg agcaggcgca gcgacagccg
    20341 cagcggcccg gcaggcagcc gcgccgcaca gctccgcgcc tcctggatcc aggcgacctc
    20401 gccactgagc cttccgagaa caagagcggc gcaaagcaca gacgtgagag cccggcggga
    20461 gcacatcccg agcatgagcg ggatcccgac cacccaatgc ggagcgccaa aatgcagaag
    20521 gccggtcgcg agaccggccc catatgccgt agtgaacaga atgggaggcc ggagcctcac
    20581 cacccgggcc ctactgctgc gtccctcccc gagccttgca gcggggggcc actgaaatct
    20641 tgcgcagcgc ctccatgacg atgacttcta tcgcggcccg gctttgttcc ttctcgaggc
    20701 tcacctcggt gaccaccgct ccctcccggc gagagacata acgcggcggc acccgattga
    20761 gcgcaaacgt caagacatcg tcccggcaga gctcgcagcc acagaagctg ggaaagtgcg
    20821 gccgcagggt gtcgtacgcg gccgtgacgt gatcctccac caggttcctg atcacagcac
    20881 cgccagcgcc ggtgttgcca ccgatccggt gaacgtggat cctgtggtcc cggtgaggcg
    20941 gaccctgtga tactcgccgg tactgctttg cggcaggtcg accagcacga ggtggttgga
    21001 gcgggttcgt gccagcatga gctccccacg tttggccgga cgctccacca atgcttcgtg
    21061 aatttctccg acccggccga tattctttcg gcgggtgcag gcgcgaacag tctcgatgag
    21121 gcgatcgagg cgatccgacg ccacctcgtc gggaatgtga tccctgaggc gaaccgcggg
    21181 cgtgccctca cgcaccgaat acttgaacgt gtaggcgtcg tcgaaatcgg catcggtggc
    21241 caggctcagc gtctcttcga actgggcgtc ggtttccccg gggaacccga caatgatgtc
    21301 ggttgacaac gtcacgccag ggatggcccg gcggagctcg gccacgacct cgagatatcg
    21361 ctcccgggag tagcggcgca gcatccgttt gagtactgca ttcgagccac tctgcaccgg
    21421 caggtgcaca tgctcgcaga ccgccggcgt ggtagccatg gcttcgatga cacgagccgt
    21481 gaagtcggtg ggatatgggc tggtgaaacg cagccgccgc agcccatcca ccccgccgac
    21541 cgcccgcagc aggtcggcga aatcgtgcgt gccatcgtgg tagctgttga ccgtctgccc
    21601 gagcagggtg acctcggtgg ttcctcgctc caccagcgcg cttacttccc gcaccacatc
    21661 gtccagtctt cggctgcgct ccggtccccg ggtctgcgga acaatgcaga acgtgcagcg
    21721 gtaatcgcac ccgcgctgta ccgttacgaa tgcggtgggt ccgttttccc gcaccgcggg
    21781 aacgtcctcg tagtgctccc acgaacggaa ctcagtgtcg ctcacccgct gtccgccttg
    21841 agcgagtccg aggagctctg gcaagtttcg gtaggcatcc ggcccgacca ccaggtccac
    21901 ccgggggacc tgggcgagga gcgctggacc caggcgctgg gccatgcagc cgaccacacc
    21961 gaggaccccg ccactccgct tatagcgctg caactcgccg acccggccga tcactcgttg
    22021 ctcggcgttg tcccgcaccg cgcaggtgtt taccagcacc acatcggccc ctgtcggctc
    22081 agcggcccgg acgtacccat tccggagaag cacgccgaac atgagctcgg aatcggccac
    22141 gttcatctgg cagccgtagg tttcgatgta gacgcttttc agcatggggc aattatagcc
    22201 gggcggcagg gcagcggggc agcggggagc aggacggcat ggcaggagtg tggcgcggaa
    22261 agcaatcgca caccagcgca tttccaggtg gaagcaaact gccccgcagc cccgccgccc
    22321 cgccgccgtg ccccctcacg gcctcacgga gacacccagg gagacgagta gcgcgcgctc
    22381 ggagtagggc ccctcggcgc gccagagatg ctccagcgcg aggtcgatgc ccgcgcgctg
    22441 ttgcgcaaaa cgcatcccgg tgcccagtga cacaccgacc tcgtgaccct gttccccggg
    22501 gagcaacgga aacgggaggg tcgcgtaccg cacgcccagc cgaatcggcc ggcggtatgg
    22561 acgtttcgga tcggaggtgt actgcacacc cgccgccacc tcgaacgtat tctcggcgcc
    22621 ggttccgcct tgttggagca ggtcgctgtt ggcacccgac caggtacgca cgatgctctg
    22681 cactcccagc tccagctgtc ccaccggctg aagccggatg ccgagaccga aggtgtaggg
    22741 gagatcgacg gtgcccaccc gggccgagtc gcggtccacg ttgacctgcc catcggttcg
    22801 taggagcgcg gc
//
LOCUS       DASYRV010000232         1661 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_89645, whole genome shotgun sequence.
ACCESSION   DASYRV010000232 DASYRV010000000
VERSION     DASYRV010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89645"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..258
                     /locus_tag="VGQ24_06015"
     CDS             <1..258
                     /locus_tag="VGQ24_06015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454425.1"
                     /translation="SAHATQSAAAAGVFTALLGEVAFSDSTNLALGHPARRFASFKAA
                     ADEAAMSRLYGGIHYNMGNEGGKVSGRCIAAKVLERVKTRD"
     gene            complement(301..1104)
                     /locus_tag="VGQ24_06020"
     CDS             complement(301..1104)
                     /locus_tag="VGQ24_06020"
                     /inference="COORDINATES: protein motif:HMM:NF025092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEV8454426.1"
                     /translation="MPRFVVPRVACFCAVLTQVGLAAPVAGQSPPRAQIRGWVVTRTD
                     IPLSGAEISVAGDSLAAISDSDGSFVLRGIPPGQHVIRVRRIGYLAQYLVAILAPGEQ
                     KDEVVITLFPGAYRLAEVEVTARLAKPIEYAWTMKYDEFFRRQRVGLGYYISRKDIDR
                     KTALETPELLIGVPGLQIRPGAPGLVPTAVKSVRCGKFSVWVDGWEQHIERGQGMMGD
                     PKTPAQVTGALLERIHPLQIEMIEVYTSPARGQPEFVGNSCGAIMIWTR"
     gene            1234..>1661
                     /locus_tag="VGQ24_06025"
     CDS             1234..>1661
                     /locus_tag="VGQ24_06025"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HEV8454427.1"
                     /translation="MLPTAALALAACRGSAPLPPSEWQEGQGYRWRELAVTTRGQPGF
                     TQLSPGSTGISFANFVSDSALLRNQLLADGGGVAMGDVNGDGRPDIYLCRTEGPNALY
                     LNDGNWKFHDVAEEAGVALPKQASTGAVLADVNGDGSLDLL"
BASE COUNT          303 a          542 c          531 g          285 t
ORIGIN      
        1 tcggcgcacg ctacccagtc cgctgcggca gcaggagtgt tcaccgcgct cctgggagag
       61 gttgccttca gcgacagcac caacctggcg ctcggacatc cggcgcgtcg gtttgcctcg
      121 ttcaaggccg cggccgacga agccgcgatg tcgcgcttgt acggcgggat ccactacaat
      181 atgggcaacg agggggggaa ggtgagtgga cgctgcatag cggcgaaggt gctggagcgg
      241 gtgaagacga gggactagct atgggctatg ggctatgggc ttcgagccga gccaagcgac
      301 ctagcgggtc caaatcatga tggcgccgca gctgttgccc acgaactcgg gttgtcccct
      361 ggccgggctg gtgtagacct cgatcatctc gatctgaagc ggatggattc gttcgaggag
      421 cgcaccggtg acctgtgccg gagtcttggg atcacccatc atcccctgtc ccctttctat
      481 atgctgctcc cagccgtcga cccagacgct gaacttcccg catcggacgc tcttcactgc
      541 agtcggaacc aggccaggag cgccgggacg gatctgcaag ccgggtacgc cgatcagcag
      601 ctcaggggtc tcaagcgccg ttttccggtc aatatccttc cggctgatgt agtagccgag
      661 tcccacgcgc tggcggcgga agaactcgtc gtacttcatc gtccaggcgt attcgatcgg
      721 cttggccagc cgcgcggtca cctcgacttc ggcgagccgg tacgcccccg gaaacagagt
      781 gatgaccact tcatctttct gctcgcccgg ggccaggatg gcaaccaaat actgagccag
      841 gtagccgatc cggcggaccc gaatgacatg ctgacccggc gggatgcccc ggagcacgaa
      901 gctaccgtcg gaatcgctga tggcggcgag ggagtcgcct gctaccgaga tctcagcgcc
      961 ggaaagtggg atgtcggtcc gggtcacgac ccagcctcgg atttgggccc ggggcgggct
     1021 ctgacctgca accggagcgg ctaacccaac ttgagtcagg acagcgcaaa agcaggcgac
     1081 gcggggtacc acgaaacggg gcatgacagg actcctcgga cccgcggact agagctaacc
     1141 tccctcgtca gcgcacgcaa gcacggtcgt cacaccaagc ggtttcgttc ctcggtccgt
     1201 atagatttcc tgaacatgca atcagctcga tggatgcttc cgaccgcggc tctcgcgctc
     1261 gcggcctgcc gcggctccgc tcctctgcca ccctcggaat ggcaggaggg ccaaggctac
     1321 cgctggcgag agctggcggt caccacccgc ggccaacccg gcttcaccca gctctccccg
     1381 ggcagtaccg gcatcagctt tgccaatttc gtcagcgatt cggccctgct ccggaaccag
     1441 ctgctcgccg acggcggcgg agtggctatg ggcgacgtca acggcgatgg ccggcccgat
     1501 atttatctct gccggaccga gggacccaac gccctgtatc tcaacgacgg gaactggaag
     1561 ttccacgacg tcgccgagga ggccggcgtg gcgctcccca aacaggcctc gaccggcgcg
     1621 gtgctggccg atgtgaacgg cgacggctca ctcgatctcc t
//
LOCUS       DASYRV010000233         1583 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2539607, whole genome shotgun sequence.
ACCESSION   DASYRV010000233 DASYRV010000000
VERSION     DASYRV010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2539607"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..344)
                     /locus_tag="VGQ24_06030"
     CDS             complement(<1..344)
                     /locus_tag="VGQ24_06030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PtsA"
                     /protein_id="HEV8454428.1"
                     /translation="MVGVLVLCAILSVLPLLLILGTLVAKGASSINLDFFTRMPVPAG
                     ESGGGVAHAIVGTLLMVGAACLIGLPIGISAGIFAAEWPGTRLATATRFIADVLNGTP
                     SIVVGVFAWAWIV"
     gene            complement(377..1363)
                     /gene="pstC"
                     /locus_tag="VGQ24_06035"
     CDS             complement(377..1363)
                     /gene="pstC"
                     /locus_tag="VGQ24_06035"
                     /inference="COORDINATES: protein motif:HMM:TIGR02138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HEV8454429.1"
                     /translation="MSAPTAAEAPDRPTPAARLYGFATGDWVFRILLTLAALAIPLLL
                     AALTWELVSGSRLAIAKYGLRFLTTSTWDPVAGQFGALPLIFGTVVSSIIALLIAVPL
                     SLGVAIFLTEFAPKVIRQPIAYVVELLAAVPSVVYGLWGIFFLLPFLRTTIFPVLRST
                     LGFLPFFQGPLYGPSMLSAGIILAIMVMPYVMSVTREVLNAVPGSQREAALALGATRW
                     EAAWTAVVPYARSGIVGAVILGLGRALGETMAVTMVIGNSHDISASLFAPGYTMAAAI
                     ANEFTEAATDIHFAALAYAALVLFAITVLVNALARILIWRVTQGRPSGGGDL"
BASE COUNT          300 a          532 c          546 g          205 t
ORIGIN      
        1 acgatccagg cccaggcaaa cacgccgacc acgatcgagg gcgtcccgtt cagcacgtcg
       61 gcaatgaagc gggtggccgt cgcgagccgg gtgcccggcc actccgcggc gaaaatgccc
      121 gcgctgatgc cgatcggcag cccgatcagg cacgccgctc ccaccatcag gagggttccc
      181 acgatcgcgt gggccacccc gccgccgctt tcgccggccg ggaccggcat ccgcgtgaag
      241 aagtcgagat tgatgctgct ggcgcccttc gcgaccagcg tgccgagaat caagagcagc
      301 ggcagcaccg aaaggatggc gcagagcacc agcacgccga ccatgatgcg gctcctccac
      361 cgccggaagg ctcgcctcac aggtctcccc ctccgctggg ccggccctgg gtcacccgcc
      421 agatgaggat gcgggccagg gcgttcacca gcacggtgat cgcgaagagc accagggcgg
      481 cataggccaa cgccgcgaag tggatgtcgg tggccgcttc cgtgaactcg ttggcgatcg
      541 ccgccgccat ggtgtatccg ggggcgaaga gcgaggcgga gatgtcgtgg ctgttcccga
      601 tgaccatcgt gaccgccatc gtttcgccca gcgcgcggcc cagacccaga atcaccgcgc
      661 cgacgatccc tgagcgcgcg tacggcacca ccgccgtcca ggccgcttcc cagcgcgtcg
      721 cgcccagggc cagcgcggcc tcgcgctggc tgcccggcac ggcgttgagg acctcccggg
      781 tcaccgacat cacgtacggc atgaccatga tggccaggat gatccccgcc gaaagcatgg
      841 aggggccgta cagcggccct tggaagaagg gcaggaagcc gagcgtgctg cgcagtaccg
      901 ggaatatcgt ggtgcgcagg aagggaagca ggaaaaagat cccccagagt ccgtagacca
      961 cgctgggtac cgccgccagc agctccacca cgtaggcgat gggctgccgg atcaccttcg
     1021 gggcgaactc ggtgaggaaa atcgcgacgc caagggagag cggcaccgcg atgagcaacg
     1081 cgatgatcga ggacacgacc gtgccgaaaa tcagcgggag cgcgccgaac tgcccggcca
     1141 ccggatccca ggtcgaggtg gtgaggaatc gcagcccgta cttggcgatg gcaaggcggg
     1201 agcccgacac cagctcccag gtcagggcag ccaggaggag cgggatggcc agggcggcca
     1261 gcgtcagcag gatccgaaaa acccaatcgc ccgtcgcgaa gccatacagg cgggcggcgg
     1321 gcgtgggacg gtcgggtgct tcggccgcgg ttggagcgct catcgacgcg ggagtctacc
     1381 cagccgggat tcgggttccg tcacgaacac gtaacggaag cgtaacggcc tcagggtatc
     1441 ggctttcccc cggacttcag cgacttgatt cgggcctggg caagggccac caccggcttg
     1501 ggcagcggtg cgtactgcag cgccgcggcc atctgctgcg cctcgtcggt cagcatccac
     1561 tccaggaagg tcttgagcgc ctt
//
LOCUS       DASYRV010000234         1733 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3163339, whole genome shotgun sequence.
ACCESSION   DASYRV010000234 DASYRV010000000
VERSION     DASYRV010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1733
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3163339"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..486
                     /locus_tag="VGQ24_06040"
     CDS             <1..486
                     /locus_tag="VGQ24_06040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEV8454430.1"
                     /translation="KNIGQVLEMSVEEGVSFFQDRSLIAHKLGMLDQLGLGYLKLGQP
                     STTLSGGESQRIKLTRELGKIKRGAHNLYILDEPTTGLHLADIQRLLDCLGRLVDAGS
                     TVLVIEHHLDVIKTADYVIDLGPEGGNNGGEVIARGTPEEITRMPQSYTGQFLRPCLA
                     A"
     gene            550..1089
                     /locus_tag="VGQ24_06045"
     CDS             550..1089
                     /locus_tag="VGQ24_06045"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HEV8454431.1"
                     /translation="MRRIRYGVAMSLDGYIAGPKGEADWIIMDPDIDFDGLFAEFDTI
                     LMGRHTFETVARGGSGAWPGMKTFVFSRTLRQCDYPGVTIVAEKSEETLAALRAKSGK
                     DIWLFGGGLLFRSLLEAGLVDTVEVAVVPVLLGGGIPLLPPPAKQAKLKLTGHKVYKT
                     GIVSLEYEVTDESGSGADL"
     gene            1218..1460
                     /locus_tag="VGQ24_06050"
     CDS             1218..1460
                     /locus_tag="VGQ24_06050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454432.1"
                     /translation="MVATNQKAGRLDQIGKQVHASMARAIQPFHTESDGDVLYAVTTS
                     EVENKALSDVALGALASELAWDAVLSSYQADAPRDR"
     gene            complement(1476..>1733)
                     /locus_tag="VGQ24_06055"
     CDS             complement(1476..>1733)
                     /locus_tag="VGQ24_06055"
                     /inference="COORDINATES: protein motif:HMM:NF016876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEV8454433.1"
                     /translation="GNVRQRVKRAIEGLVDNPRPPSSKALDVPEVDAEIRRLRLDTWR
                     IVYAVTEADRAIDILAVRKRPPYDYGDLSSLITDTIRRDPP"
BASE COUNT          301 a          549 c          573 g          310 t
ORIGIN      
        1 aagaacatcg gccaggtgct ggagatgtcg gtcgaggaag gcgtctcctt cttccaggac
       61 cgctcgctga tcgcgcacaa gctcggcatg ctcgatcagc ttggcctcgg ctacctgaag
      121 ctcggccaac cttcgaccac cctctccggc ggcgagtccc agcgcatcaa gctcactcgc
      181 gagctgggca agatcaagcg cggcgcgcat aacctctaca tcctggacga gccgaccacc
      241 ggcctgcacc tggccgacat ccagcggctg ctcgactgcc tcggccggct ggtggacgcc
      301 ggcagcaccg tgctggtgat cgagcaccac ctggacgtga tcaagaccgc cgactacgtg
      361 atcgacctgg gcccggaggg cggcaacaac ggcggcgaag tgatcgcgcg gggcacgccg
      421 gaagagatca cccggatgcc ccagtcgtac accggccagt tcctgcggcc gtgcctggcg
      481 gcgtagcgcg gccgcggctg ggcttggtca tgaggcagcc ggcatacgca atttgcgcgg
      541 gaggtatcca tgcgacggat tcgctacggg gttgcgatga gtttggacgg gtacatcgcc
      601 gggccgaagg gcgaagcgga ctggatcatc atggatccgg acatcgactt tgatggcctg
      661 ttcgcggagt ttgacacgat tctcatgggc cgccacacct tcgagacggt ggcccgagga
      721 gggagcggcg cgtggccagg catgaagacg ttcgtctttt cgcggacgct gcggcaatgc
      781 gactatccgg gagtgaccat cgtcgctgag aagtcggagg agacgttggc cgccctccgg
      841 gcgaagtcgg gaaaggacat ctggttgttc ggtggcggct tactctttcg cagtctcctc
      901 gaggcagggc tggtggacac ggtggaggtc gcggtcgtgc cggtacttct cggcggcggg
      961 attccgctgc tcccacctcc ggccaaacag gcaaagctca agctgaccgg ccacaaagtg
     1021 tacaagacag ggattgtttc gttggagtac gaggtgacgg acgagagcgg ttccggcgct
     1081 gacctttgac ttccccagac tgcacgtcgg cgtggccgag tattcggagg gtccgaccgg
     1141 ctgcacggtc ttctactttc cggacgggcc tcctgcgcgg tcgacatccg cggctgccgg
     1201 gcaacaccac gcgcaccgtg gtcgccacca accagaaagc gggtcgcctc gatcagatcg
     1261 gcaagcaggt ccacgcctcg atggcgcgcg ccattcagcc cttccacacc gagagcgatg
     1321 gggatgtcct ctacgcggtg accaccagcg aggtcgagaa caaggcgttg agcgacgtcg
     1381 cgctgggggc cctcgcttcc gagctcgcct gggatgccgt gctctcctcc taccaggcag
     1441 atgcccctcg ggatcgatag gcgctcttct tccggtcagg ggggatcacg acggatggtg
     1501 tcggtgatca agctcgacag atcgccgtag tcatagggcg ggcgcttccg gaccgccagg
     1561 atatcgatcg cacgatctgc ttccgtgacg gcatagacga tccgccacgt gtctagcctg
     1621 agccggcgga tctccgcatc gacctccggc acgtcaagtg ccttgctgct cggcgggcgt
     1681 gggttgtcga ccaacccttc aatggcacgc tttactctct gccgcacgtt tcc
//
LOCUS       DASYRV010000235         5034 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_505251, whole genome shotgun sequence.
ACCESSION   DASYRV010000235 DASYRV010000000
VERSION     DASYRV010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5034
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_505251"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            538..1230
                     /locus_tag="VGQ24_06060"
     CDS             538..1230
                     /locus_tag="VGQ24_06060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454434.1"
                     /translation="MSKYEKSEKAARRGYEIARAHGLREEMIHGLASIDEARRMQQQP
                     YLPGIRATASSGLRYVPLLFKFLVDLRRIHGLIRHAEQEVDPFLRDSLWHVGLEHKIR
                     LFGTLQGIIQSLLGRRLAGILFGGAWESIQRDSFSVGYAAGVANGLKYQDRTRTPARA
                     PPVKGLGPTEIVSSTQVYEFMNHRTGLALVLRDRADSLVRVIVRGHLVYSNAVWSLHA
                     KARTRPLNLRAF"
     gene            1618..4245
                     /locus_tag="VGQ24_06065"
     CDS             1618..4245
                     /locus_tag="VGQ24_06065"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEV8454435.1"
                     /translation="MTYERLATELADRYHLERELGRGGMAVVFLAQDLKHSRQVAVKV
                     LNAEFGGTALAERFFREIGIAARLAHPNILPLHDSGQAAGRLFYVTPYLEGESLRGWL
                     ERERRLPLEVAIGLAGEIADALDYAHRHTVIHRDIKPDNILISDGHAIVADFGIATAL
                     AADDARLTSSGLVLGTPRYMSPEQAVAEKIDGRSDIYSLACVLYECLVGVPPSAGGTG
                     RFPGSLGTKGVARTLQAAQPSAPRHVVEAIQRGLSPDPADRHPRASDFRRALFADPHA
                     RRRRRWWITVGVGAAVLLAAGFMLFRSRISAPAGLEYTPLTNFAESATSPALSPDGRM
                     LAFIRGASTFSGPGQIYVKLLPDGEPVQLTKDDRVKRSPKFSPDGARIGYTAVDDRGV
                     TLDTWVVPVLGGQPRLLLANAEGLTWIQERTMGAASPPFVLFSEMTGRGFQKSIVTST
                     ESRTGQRTVYLPPENGMAHRSSLSPDRKQVLVVEMGNNGGQGGYGWLPCRLTPFDGSS
                     SGKSVGPAPAQCTDAAWSPDGKWMYFSANTGGGFHIWRQRFPDGTPAQVTFGVTEEEG
                     VHFAPDGRSFVTSIGSRQSTVWIHDSSGDRQITSEGFAFFPTVSPDAKKLYYLVRAGG
                     ARSFVTGSLWVAELESGQRQRLLPDFQMQHYTISADGQRVVFVGLDDAGRTPVWLAAL
                     NGRTAPRRLTTINGWAAYFGAPGEVVFASEGRDFVYRIKDDGSDLQKMIPTPMLRPFG
                     VSPDGRWVPAAEGPTPDKRNELMVYPAGGGPPTLICRCYPPQPIDIGPIPSYLSWTPD
                     GRFLYLKFAASTYAIPLQPGQVLPPIPASGFQSQEAVAALPGARLISKESVFPGPNPS
                     IYAFMKVATQRNIYRVPVP"
     gene            complement(4760..4921)
                     /locus_tag="VGQ24_06070"
     CDS             complement(4760..4921)
                     /locus_tag="VGQ24_06070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454436.1"
                     /translation="MTIPTSNGRLPTARWLPSELRADLQGYVVYLRVPAGAPDLDLRS
                     GTILANEEA"
BASE COUNT          880 a         1596 c         1587 g          971 t
ORIGIN      
        1 ccaacgcgtc ttcacaagat tcccgtcctg tctactcggt tatagcggca gggacatcga
       61 cctgttcccc ttcgtcgcca gcttctcttt ccctttggat gggcaagcat tctggttgtg
      121 cagggagttt aagcgggatc acggcatcta cgctcggccc gagaagttca taggccttca
      181 aggagaggca gacgactggg ctcgtcgtgt catcccggga atcacggaca attcagagcc
      241 gggtcgagtc ctgcatgacc tcctagagca ccaagaagac ctgctcgcga cgaggtgcac
      301 agaagtccgc acgacctatc tccagaacgc tgcgacgctc atccgcgaac ggctctgccc
      361 actcttagac agtactggcg cgccggaccg gctactgctt catgcagtat cgctggcaaa
      421 cgttcagcac ttcggtgagg cggcggggta tgcccaaagt tacttaaagg ccgccgtagg
      481 ggctgaccgc gccgtatcgc gggcgctgaa atactcttgt cgtcctgcta tcacaacttg
      541 tcgaagtacg agaagtctga gaaagctgct agacgaggct acgagatcgc ccgggcacac
      601 gggctgcggg aggagatgat ccatggcttg gcgagcatcg atgaagcgcg tcgaatgcag
      661 caacagccct atctccctgg cattcgtgcg accgcgagct ccggtctgcg gtacgttccg
      721 ctgctgttca agttccttgt cgacctgcgg cgcatccacg gattgattcg ccacgcggag
      781 caggaggtcg atccctttct ccgagactcc ctttggcacg taggcctcga gcataagatc
      841 cgtctcttcg gcacgctgca aggcatcatc cagtcgctgc tcggaagaag gctagctggg
      901 atcttgtttg gcggggcgtg ggaatcgatc cagcgggaca gcttcagcgt cgggtatgca
      961 gccggcgtcg caaacgggct caaataccaa gatagaacga gaacgccagc tcgtgcacct
     1021 ccagtgaagg ggctgggtcc cacagagatc gtgtcttcca cccaggtcta cgagttcatg
     1081 aatcatagga ccggtctggc gttagtactc cgcgatcggg cagacagcct agtcagggtg
     1141 attgtgaggg ggcatctcgt ctattcgaac gctgtgtgga gcttgcacgc gaaggccaga
     1201 acgcgtccct tgaacttaag ggccttctag gactgcgccg atgtggtaag caggtcgacc
     1261 gcgaccgggt agcgtttctc ctacacacca tagaaggccg cggctaccgc cgtctaaggg
     1321 cgactctcat ggagtacgtt gccggctaac ccgcgcatgc agttgacgag cgcgccggcc
     1381 tcgggacacc ttggacaagc tggctagagc gctcgcaact gatgcgcaga tcgttatgcc
     1441 gcacctgcgg cattgctcca gcaaagggat ggcgtttccc ccggggtatc ttccacctca
     1501 cgacttgtat cggcggcgca cccgcgccat tgatatctta gaactggtca ccacggccgc
     1561 acctcaacgc gaatccgtga gaccgcgtga cggaatagtt gccgagggca cgtattgatg
     1621 acgtacgagc ggctggcaac agaactcgcg gaccgctacc acctcgagcg ggagcttggc
     1681 cgggggggta tggccgtggt gttcctggcc caggacctca agcactcccg gcaggtggcc
     1741 gtgaaggtcc tcaatgccga gttcggaggg accgcgttgg ccgagcgctt cttccgggag
     1801 atcggcatcg ccgcgcggct cgcccatcct aacatcctgc ccctccacga ttccggccag
     1861 gccgccgggc ggttgttcta cgtcacgccg tacctggaag gtgagagcct gcgcgggtgg
     1921 ctggagcgtg agcgacgcct gcccctcgag gtcgccatcg ggctcgccgg cgagatcgcc
     1981 gacgcgctcg attacgcgca ccgccatacc gtaattcatc gggacatcaa gcccgataac
     2041 attctcatct ccgacggcca tgcgattgtc gccgacttcg ggatcgccac ggcgctggcc
     2101 gccgatgacg cccgtctgac cagctctgga ctcgtcctgg ggactccccg gtacatgagt
     2161 ccggagcagg ccgtcgcgga aaaaatcgac ggccgcagcg acatctatag tctggcgtgt
     2221 gtgctctacg aatgtctggt cggcgtgcct ccctccgcgg gcggcaccgg caggttcccc
     2281 ggctcgctcg gcaccaaggg cgtggctcga acccttcagg cggcccaacc gtccgccccg
     2341 cggcacgtcg tcgaggcaat tcagcgaggc ttgtccccgg atccggcaga ccgccaccca
     2401 cgtgccagcg atttccggcg cgcgctcttt gccgaccctc acgctcggag gcgccgtcgg
     2461 tggtggatca ccgtgggggt cggcgcggcg gtgctgcttg ccgccggctt catgctcttc
     2521 cgctcccgga tttcagcccc ggccggcctg gagtacacac cgctcaccaa cttcgccgag
     2581 tctgccacct cgcccgcgct ctcgccggac ggccgcatgc tggcgttcat ccggggggcg
     2641 agtacgttct ccggtccggg gcagatttac gtcaagcttc tgcccgacgg ggagccggtg
     2701 caactcacga aggatgaccg cgtcaagagg agccccaagt tctcgccgga cggggcccgg
     2761 atcggttaca cggccgtcga tgataggggt gtaactctag acacctgggt cgtgcccgtg
     2821 cttggcgggc agccgcggct gttgttggcc aacgcggaag ggctgacgtg gattcaagaa
     2881 cggactatgg gcgccgccag tccgcctttc gtcctgtttt ccgaaatgac cggccgggga
     2941 tttcagaagt ccatcgtgac ctcgacggag agccgcaccg ggcagcgcac ggtctacctg
     3001 ccgcccgaga acggcatggc ccaccgctcc agtctctcgc ccgatcggaa gcaggttctt
     3061 gtggttgaga tgggcaacaa cggaggacag ggaggatacg ggtggctgcc ctgccgcttg
     3121 acaccctttg atgggagctc gtccggaaag tccgtcggcc cggcgccggc gcagtgtacc
     3181 gacgccgcct ggtcccccga cggaaagtgg atgtacttct ccgccaatac cggcggcgga
     3241 ttccacatat ggcggcagcg tttcccggat gggacacccg cgcaggtcac cttcggcgtc
     3301 accgaggaag aaggggttca tttcgctccc gacggacgtt ccttcgtcac gtcgatcggc
     3361 agcaggcaga gcaccgtgtg gatccacgat tccagcggcg atcgccagat cacttcggaa
     3421 ggcttcgcgt ttttcccgac cgtctcaccc gatgccaaga aactgtatta cctggtgcgg
     3481 gccggaggag cgcggagctt cgtgaccgga agcctctggg ttgcggagct ggaatctggg
     3541 cagcgccagc ggctgctgcc agattttcag atgcagcact acacgatctc tgcggacggc
     3601 cagcgcgtgg tgtttgtcgg gttggacgat gcggggcgca cgcctgtgtg gctggcggca
     3661 ctgaatggcc ggaccgcgcc gcggcggctc accacgatta atgggtgggc ggcatacttc
     3721 ggcgcgcccg gcgaggtggt gttcgcgagc gaggggaggg acttcgttta tcgcatcaaa
     3781 gacgatggca gtgacttaca gaagatgatc ccaacgccga tgctccgccc gtttggtgtc
     3841 tcgccggacg ggcgatgggt accggccgca gagggcccca ctcccgacaa gaggaacgag
     3901 ctgatggtgt atccggctgg agggggacct cccacactga tctgcagatg ttacccgccc
     3961 cagcccatcg acattggtcc gataccttcc tacttgagct ggacaccgga cgggagattt
     4021 ctctatctga agtttgcagc ctctacgtat gctattcctc tgcagccggg ccaggtgttg
     4081 ccgcccatac ctgcctcagg atttcaatca caggaagctg tggccgctct gccgggagcg
     4141 cggctgatct cgaaggaaag cgtgtttccc ggtcccaatc catcaatcta tgcgtttatg
     4201 aaggtggcca cgcagcgcaa catctatcgt gttccggtgc cgtgacccgg cgcccactcc
     4261 agggttcatg agatgcgtag gtcgccaagc ggtacgtccc agcgcggcat aaccagcgcc
     4321 tgctgctgcc ggggcgtggg cgcctcagcc gccgcggtgt aatttcaacc ttggtctgcg
     4381 gcggcttcgg cacgccccgc agcagaagcg cagggcgtta ggtggcggca ccctacatga
     4441 ggcgtccatg gccgatgtcg ctcctcggcg cggtggggat tacttgatag gacctctcaa
     4501 ggccgcgagg ggatcagcca tgtactggct gttgcttgcc cccttggctt tggttcccgc
     4561 ttgcgcctct tcgagtgcga atcagccccc aggtactgtg ccgtcccgcg agcatggcga
     4621 ccggccatct accctttgcg ttgaccgcag tcagccatat cgaccaccgg tgccactcaa
     4681 ctatgacgct gtgcgccgtt cagtcgggat tcactggccc gaccaaatcc cacaatccgg
     4741 tccgcctatc gtcctgttcc tacgcttctt cattcgcgag aatggttcca ctgcgaaggt
     4801 cgagatctgg cgctccagcc ggaacccgca agtagacgac atagccttgc aggtcggcac
     4861 ggagctccga tggcagccag cgcgctgtgg ggagtcgccc attgctggtt ggtatggtca
     4921 tcctattgcg ctcggcggag cgccttaaca ctgtgcggca cgccgccacc taacccgcgc
     4981 ttgctgctgc cgggggcctg ggcgcggcgg cccgccgccg ggtatgtttg ctgg
//
LOCUS       DASYRV010000236         6738 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1333645, whole genome shotgun sequence.
ACCESSION   DASYRV010000236 DASYRV010000000
VERSION     DASYRV010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6738
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1333645"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..189
                     /locus_tag="VGQ24_06075"
     CDS             <1..189
                     /locus_tag="VGQ24_06075"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEV8454437.1"
                     /translation="SDAYNPKLSQSRAESVRTFLLEQGIPTERIPSTEGFGRTRPIAP
                     NDTRVNREKNRRVDIVIE"
     gene            392..1267
                     /gene="era"
                     /locus_tag="VGQ24_06080"
     CDS             392..1267
                     /gene="era"
                     /locus_tag="VGQ24_06080"
                     /inference="COORDINATES: protein motif:HMM:NF000908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEV8454438.1"
                     /translation="MSQRTGHIALAGAPNVGKSTLLNALVGQHLAIVSPKPQATRLPV
                     TGLRTDQDIQYIFHDLPGLLDPSYLLQTRMRELALQTARKMDLVLHLHPAPDAPAPPF
                     DRLTGLAEPLGVPVLTVYTQGDLVHPARRAELEQESPVVATSGDDGIAGLLQRVGSYL
                     PEGEFEYDPDDVGTQPVRFFVVEYLREAAFELLGDELPYSFTAEVEEFREAERPIYIR
                     VTLFVERESQKAIVIGRSGTTIKAIGAHARRRLEELIGAPVYLDCWVKTLPNWRKNSG
                     ALTRFGFPAAPKEST"
     gene            1264..1431
                     /locus_tag="VGQ24_06085"
     CDS             1264..1431
                     /locus_tag="VGQ24_06085"
                     /inference="COORDINATES: protein motif:HMM:NF015899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HEV8454439.1"
                     /translation="MTLSPELLQILVCPKCKGELEYRASPEALICRSCRLVYPVEDGI
                     PIMLIDEAKPL"
     gene            1464..2999
                     /gene="cax"
                     /locus_tag="VGQ24_06090"
     CDS             1464..2999
                     /gene="cax"
                     /locus_tag="VGQ24_06090"
                     /inference="COORDINATES: protein motif:HMM:TIGR00846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015368 - calcium:monoatomic cation
                     antiporter activity [Evidence IEA];
                     GO_process: GO:0006816 - calcium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/proton exchanger"
                     /protein_id="HEV8454440.1"
                     /translation="MNPHTLSAQAQRALENARAEAVRLGHDSIGAEHILLGLLRDNGP
                     GAALFAALGLNSGSIQEKLEASGRRGRQNPGSQELAYTSHAKHLIEAASKEARESGTA
                     VSAEHLLLAALQEPRGTVARILTEAGVSAERAKAAVYESLESRAGEPGRRPAAGRPSR
                     RLSWRVVLLLALPASILLEYVFHAPALAVFVTACLGVLPLAGYMGEATEHLAHRTGPT
                     IGGLLNATFGNAAELIISIVALQAGLVSLVKASITGSILGNLLLILGLAFVAGGTRSS
                     ELRFNRTSAGMSAGMLTLAVVGLVLPALFHALHPEQAARLPELRMSEAVAVILLLTYG
                     LSLLFSLKTHRRLLSADAAPTEGPSWGVGKATLILALATVGVAVESELLVHAVTEAGN
                     TLGLTEMFLGLIIIPIIGNAAEHATAVVVARKGKMDLALQIALGSSTQIALLVAPLLV
                     FCGVLLGQNMDLVFTPFEVMTLGLATIVTAIITLDGESHWFEGVQLLAVYGMVAVGAF
                     FLV"
     gene            3057..4049
                     /locus_tag="VGQ24_06095"
     CDS             3057..4049
                     /locus_tag="VGQ24_06095"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEV8454441.1"
                     /translation="MRTRPTILFFSPDGCPVPSLVGQWAAGHSFPLLVFSQADDVESI
                     VLRGHPCMLFVDGDHSGQEGMGLVRRLKSDAFTAIVPVTMLAGTHHAEEVQAWFASGS
                     DEVITGLFTPAEQRARLDSMLVRTERDVSVHPSTRLPGTTEIEREIRRRLESDQEFAV
                     CYADLDHFKEFNDRYSYYEGDRVIYILSRILHDVVKGLLGQRGFVGHIGGDDFIFIIP
                     AADISPVCSEVLEVFDALIPLQYNDQDRRAGYFFGKDRRGQLHRVPLMTLSIGIVTNR
                     HRRFAHPAQVSELATEMKSYAKTLPGSVFVVDRRHGTDGGERPGPGSREQPRGP"
     gene            4462..4872
                     /locus_tag="VGQ24_06100"
     CDS             4462..4872
                     /locus_tag="VGQ24_06100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454442.1"
                     /translation="MPPLAAPAAPAAAARPAAPAGAPPATAPAKPSAPPAAPSPAAKP
                     APGGRPANPFLSQDPALKARRLARALISDMVVYHPGKRQEGLRDGNLKELFEEEIKKS
                     WEEYAEQVGRDVAESTPYFREALNEILAGGRPIF"
     gene            4981..6085
                     /gene="prfB"
                     /locus_tag="VGQ24_06105"
     CDS             join(4981..5040,5042..6085)
                     /gene="prfB"
                     /locus_tag="VGQ24_06105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_319006963.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEV8454443.1"
                     /translation="MSELVDRLTDLQRRVAELRDFFDLSGKAERLSALEAKQALPGFW
                     ADAEAARTSVQEIKSLKNWLTPYDTLHERLEGALEMAELLAAEPDAGLEADIAREADA
                     LQESAEAFELQAMLQGPDDGRDALLTIHPGAGGTESQDWAEMLMRMYVRWAERHGFQV
                     SVLDLLPGEEAGIKSVSIEIKGQYAYGYLKAEKGVHRLVRISPYDSQARRHTSFASVF
                     VYPDIDDTIEIDLRDEDIRMDVFRASGAGGQHVNKTSSAVRLTHIPTNTVVSCQQERS
                     QTKNRATAMKMLRAAIYQKKLEEQEAAQALVEATKTDNSWGNQIRSYVFQPYTMVNDH
                     RTEVKVGDVQRVMDGDLDTFIQAYLKRFGGKAA"
     gene            6082..>6738
                     /locus_tag="VGQ24_06110"
     CDS             6082..>6738
                     /locus_tag="VGQ24_06110"
                     /inference="COORDINATES: protein motif:HMM:NF013499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HEV8454444.1"
                     /translation="MSTVEERSYVEAARREKRAALEARGVPAFAYRYQRTHTALEALA
                     LYRDEMGEEGPTVSIAGRLAELRSHGKTVFAHLEDSSGRIQVYFRQDTLGDLWGLVEL
                     LDLDDHIGVRGRLFRTKKGEITVRAEAGAGSAGESSESSDESALVLLAKSLRPLPRGK
                     TQETAEGAKTFGGLQDPELRYRQRYADLAVHPEVRRIFVQRAKVVTFIRRFLDERGFL
                     E"
BASE COUNT         1180 a         2216 c         2143 g         1199 t
ORIGIN      
        1 tcggatgcct ataacccgaa gctctctcaa tcgcgggcag agtcggttcg gaccttcctg
       61 ctagagcagg gaattccgac agagcgaatt ccttcaaccg agggattcgg ccgcaccaga
      121 cctattgcgc ccaatgacac acgggtgaac cgggagaaga accgccgggt ggatatcgtc
      181 atcgagtaag gcggatatca tctacgagta aatcagacag tctgaaagcc ctaccaagcg
      241 ttgcttggta gggctttcgt ctagggtcaa gggcacagtc ccctcgacgc atctagactc
      301 tacaccctag accccagacc ccagacccta gactctccac tctcgacgct ggatcctaga
      361 ctctagaccc tagactctag acctttcctc catgtcacaa cgaaccggcc acatcgccct
      421 cgccggcgcg ccgaacgtcg gcaagtccac cctgctgaac gcgctcgtgg gccagcacct
      481 cgccatcgtc agccccaaac cccaagctac ccgcctcccg gtgaccggtc tcaggaccga
      541 tcaggatatc caatacatct tccacgatct tcccggcctg ctggatccgt catacctgct
      601 ccagacccga atgcgcgagc tcgcgctcca gaccgctcgg aagatggacc tggtcctgca
      661 tctccatccg gcgcccgacg ccccggcgcc tccgttcgat cggctcaccg gcttggccga
      721 accgttgggg gtcccagtcc tcaccgtcta cacccagggc gacctcgttc acccggcgcg
      781 tcgggcggaa ctcgaacagg aatctcccgt cgtggccacg tccggggatg atgggatcgc
      841 cggcctgctt cagcgggtgg gctcctatct gcctgaggga gagttcgaat acgatcccga
      901 cgacgtcggc acccagccgg tgcgcttctt tgtcgttgag tatctacggg aggcagcatt
      961 cgagctcctg ggcgacgagc tgccttactc cttcaccgcc gaagtggagg agtttcgcga
     1021 agccgagcgc ccgatataca ttcgagttac gctcttcgtc gagcgagagt cgcagaaagc
     1081 gatcgtgatc ggccggtccg gcactaccat caaggccatc ggggcccacg cccgccgccg
     1141 gctggaggag ctgatcggcg ctccggtgta cctcgactgc tgggtcaaga cgctaccgaa
     1201 ctggcgaaag aattccggcg cactgacgcg ctttggcttt ccggccgcgc ccaaggagtc
     1261 cacatgaccc tttctcccga gcttctccag attctggtct gccccaagtg caagggagag
     1321 ctggaatacc gcgcctctcc cgaggctctg atctgccgtt cctgccgcct cgtctatccc
     1381 gtcgaggacg gcattcccat tatgctgatc gacgaagcca agccgctctg agtcatcaac
     1441 cgcctccgca tccgccaccc cggatcaatc cgcacacgct aagcgcccag gcacaacgtg
     1501 cgctcgagaa tgcgcgcgcc gaggctgtcc gactggggca tgactcgatc ggtgccgagc
     1561 acatcctcct gggattgctg cgcgacaatg ggcccggcgc ggccctcttt gccgcactcg
     1621 gcttgaacag cggttcgatc caggaaaagc tggaggcgag cggacggcgt ggaaggcaga
     1681 accctggcag ccaggagctg gcgtacacct cccacgccaa gcacctgatc gaggcggcct
     1741 cgaaggaagc ccgcgagtcc ggcactgcgg tgtcggcgga gcatctcctg ctggcggcgc
     1801 tccaggagcc tcgtggcacg gttgccagga tactcaccga ggcgggcgtc tcagccgagc
     1861 gggccaaggc cgctgtgtac gagtctctgg agagcagggc aggggaacca ggccgccgcc
     1921 ctgccgccgg ccgcccctcc cggcgtctga gctggcgggt ggtgctgttg ctcgccctgc
     1981 ctgccagcat cctgctggaa tacgtcttcc acgcacccgc gctggccgtc tttgtcaccg
     2041 cctgcctcgg cgtcctgccg ctggccggct atatgggtga agccaccgaa cacctggcgc
     2101 atcgaaccgg cccgactatc ggcggcctcc tcaacgccac ctttggtaac gccgcggagc
     2161 tcatcatctc gatcgtcgcg ttgcaggccg gcctcgtgag cctggtcaag gcctcgatca
     2221 cgggcagcat tctgggaaat ctcttgttga ttctggggct ggcgttcgtg gctggcggaa
     2281 cgaggagtag cgagctccgg ttcaaccgca ccagcgccgg gatgagcgcg ggcatgctca
     2341 cgcttgccgt cgtgggtttg gtgctgccgg ccctctttca tgccctgcac cccgagcagg
     2401 cggcccggct gcccgagctg cggatgtcgg aggcggtcgc cgtgatcctc ctgctcacct
     2461 acgggctgtc gctgctgttt agcttaaaga cccatcgccg gctcctcagt gccgatgctg
     2521 ctccaacgga ggggccgtcg tggggggtag ggaaggcgac tctaatcctg gcgctcgcca
     2581 ccgtcggtgt tgcggtggag tcggagttgt tggtccacgc agttaccgag gccgggaata
     2641 ccctgggtct caccgaaatg ttcctcggtc tcattatcat cccaatcatc ggaaacgcgg
     2701 cggagcacgc gacggcggtg gtagtggcgc ggaagggaaa gatggacctc gcgctccaga
     2761 tcgcactggg ctcgagcact caaatagcgc tcctggtcgc ccctttgttg gtgttctgcg
     2821 gggtgctgct cggacagaac atggatctcg tctttacccc attcgaggtt atgacccttg
     2881 gcctggccac gatcgtcacc gccatcatca cgctggacgg ggaatcccac tggttcgagg
     2941 gagtccagct gcttgcggtg tacgggatgg tcgcggtggg ggcgttcttt ctggtttgac
     3001 ttgggacttt caggttcgta agttagctgc acgtaacttc ttacgagagg caatgggtgc
     3061 ggactcgtcc gacgattctc ttcttttcgc cggacgggtg tccggtgccg tccctggtag
     3121 gccagtgggc ggcgggccat tcgtttccgc tgctggtgtt cagccaggcg gacgatgtgg
     3181 aatcgatcgt gctccgcggc cacccgtgca tgctgttcgt ggatggcgac cattccggcc
     3241 aagaggggat gggcctggtc cgccggctca agagcgatgc cttcacggcc atcgtgccgg
     3301 tcaccatgct ggccggtacc caccacgcgg aggaggtcca agcctggttc gcctccgggt
     3361 cggacgaggt gattaccggc ctgttcaccc cggccgagca gcgggcccgg ttggactcca
     3421 tgctggtgcg gaccgagcgg gatgtgtcgg tccacccatc cacccggctt cccggtacca
     3481 ccgagatcga acgagagatc cggcgtcggc tcgaatctga ccaagagttc gcggtctgct
     3541 acgccgatct cgatcacttc aaggagttca acgaccgcta cagttattac gagggtgacc
     3601 gggtcatcta cattttgtcc cgcatcctcc acgatgtggt caagggcctc ttgggccaac
     3661 gcggcttcgt agggcacatc ggcggcgatg acttcatctt catcatcccg gcggcagaca
     3721 tcagcccggt atgcagcgag gttctagagg tgttcgacgc gctgataccg ctccaataca
     3781 acgatcagga caggcgggcg ggctactttt tcgggaaaga ccgccggggg cagctccacc
     3841 gggtgccgtt gatgacgctc tccatcggga tcgtcaccaa tcggcaccgc cgatttgcgc
     3901 atccggctca ggtgagcgag cttgccaccg agatgaagag ctacgccaag acgctgcccg
     3961 gctcggtatt cgtggtggac cggcggcacg gcaccgatgg aggagagcgg cccggaccgg
     4021 gctctaggga gcagcctcga ggaccatgag atgaatgtca cctgcccaaa ctgcgccact
     4081 gtctatcggg tagaccctgc gaaggtgccc gaggccgggg tgcgagcgcg ctgcgcggtg
     4141 tgcagtgcgg tgttcgccgt gcgccgtgag ggcgagcaat cgcgtccggc ggtgaaagag
     4201 ccgccccgcg ccgagccgaa gcggccggaa ccaccgctgg ctcgagccga accgcccaag
     4261 gctgagcccc gcaagcccga ggcgcccgag ccggcgccgc cgaggaccga gccctcgcgg
     4321 ccagagcccg ctcgagccgc agctccgctc gcggcccctt cttcctcgcg gcccgctccg
     4381 ccctcgcccg cggcaccggc gccgcgtcct gctgcgccgc cgcgtccagc caccccggga
     4441 ttgtcaccgg cggctcctgc catgccgcca ctcgcggcac ccgcggctcc agccgcggcc
     4501 gcacggcctg cggctcccgc cggcgcccct cccgcaacgg caccggccaa accttccgcg
     4561 cctcccgctg ccccgagtcc ggcggccaag cccgcacccg gtggtcggcc ggcgaacccc
     4621 tttctctccc aggatcccgc cctcaaggca cgccgtctgg cgcgggcgct catctccgac
     4681 atggtggttt accatccggg taagcggcag gagggcctcc gcgacggcaa tctcaaggag
     4741 cttttcgagg aggagatcaa gaagagctgg gaggaatacg ccgagcaggt cggccgcgac
     4801 gtcgcagaat cgacccccta tttccgcgaa gcactgaacg agatcctggc cggcggccga
     4861 ccgatcttct gaggtgagac gtgagaggtg agaagtgaga ggggacgtcc ttctcacgtc
     4921 tcacctcttt tcctacgtac ctccgttaaa tttcattcat acctctcctg gagccttggc
     4981 atgtccgagc tcgtcgaccg tctgacggac ctccaacgtc gtgtggctga actccgagac
     5041 tttctttgac ttgtcgggga aggccgagcg gctgagcgct ctggaggcca aacaggcgct
     5101 gcccggcttc tgggcagacg ccgaggcggc gcggacctcg gtgcaggaga tcaagtccct
     5161 caagaactgg ctcaccccct acgacactct gcatgagagg ctcgagggcg cgctggagat
     5221 ggctgagctg ctggcggcgg agcctgacgc gggattggag gccgacatcg cccgggaagc
     5281 cgacgcgctt caggagtcgg cggaggcgtt cgagctgcag gcgatgctcc aggggcccga
     5341 tgacgggcgg gacgccctgc tgacgatcca ccccggcgct gggggtaccg agtcccagga
     5401 ctgggccgag atgctgatgc ggatgtatgt gcggtgggcg gagcgacacg gctttcaggt
     5461 atcggtgctc gacctgctcc ccggtgaaga agcggggatc aagtcggtgt cgatcgagat
     5521 caaggggcag tacgcctacg gctacctcaa ggccgaaaaa ggagttcacc ggctggtccg
     5581 aatctccccc tacgactccc aggcccggag gcacacgtcc tttgcttcgg tgttcgtcta
     5641 tcccgacatc gacgacacca tcgagatcga tctccgcgac gaggacatca ggatggacgt
     5701 cttccgggca tccggtgcgg gtgggcagca cgtcaacaag acgtcgtcgg cggtacggct
     5761 cacccatatc ccgaccaata ccgtcgtctc ctgtcagcag gaacgcagtc agacgaagaa
     5821 tcgggccacg gccatgaaaa tgttgcgggc cgctatctat caaaagaagc tggaggagca
     5881 agaggcagcc caagctctgg tcgaggctac gaaaaccgac aactcctggg gcaaccagat
     5941 ccgctcctac gtgttccagc cgtacaccat ggtcaacgat caccgaaccg aagtgaaggt
     6001 gggtgacgta caacgggtca tggacggcga tctcgacacc ttcatccagg cgtacctgaa
     6061 gcggttcgga ggcaaggcgg cgtgagcacg gtggaggagc ggtcgtatgt cgaggctgcc
     6121 cgacgggaga agcgcgccgc gctcgaggcc cgaggggtac ctgccttcgc ctaccgttac
     6181 cagcgcaccc ataccgcgtt ggaggccctc gcgctgtacc gggatgaaat gggtgaggag
     6241 gggcccaccg tctcgatagc cggccggctg gcggagcttc gctcccatgg caagaccgtc
     6301 tttgcccatc ttgaggactc cagcggacgg atccaggtgt acttccgaca ggacacgttg
     6361 ggggacctgt gggggctggt ggagctgctc gacctcgacg accacatcgg ggtgcgaggt
     6421 cggctgtttc gcaccaagaa aggtgagatc actgtgcggg cagaggccgg ggccggatcc
     6481 gccggagaat catcggagag ctccgatgaa tcagccctgg ttctgctggc caagtccttg
     6541 cggccgctcc cccgaggcaa gacccaggaa accgcggagg gggccaagac cttcggggga
     6601 ctccaggatc ccgagcttcg ctatcgccag cgctacgccg atctggcggt acacccggag
     6661 gtgcggcgga tcttcgttca gcgagccaag gtggtcacct tcatccgtcg gttcctcgat
     6721 gagcggggct ttctcgag
//
LOCUS       DASYRV010000237         5613 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1334163, whole genome shotgun sequence.
ACCESSION   DASYRV010000237 DASYRV010000000
VERSION     DASYRV010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5613
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1334163"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..822)
                     /locus_tag="VGQ24_06115"
     CDS             complement(<1..822)
                     /locus_tag="VGQ24_06115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454445.1"
                     /translation="MTLDLPTFHRVPVAWLLEHGSESIRLRTRRELAYPGTSTPETLV
                     ADELAVAESKLAQAVIRKQKDTGVWGGNLLGLAASAKDGIKEVGTIPQYRRLLQLGYP
                     RTGRPFKLADRILFRLLSRDDDPFLQFEFGKLFRDSTAAGDWAREHMREAAAAALAEA
                     GYIEDPRLRGAAHKIASSVSAFLRSPLAEKPFARSGSKTILHPDAHPPTWYSVAMIAA
                     MPNLQRERAGFTERLGQYLGLAMSKKSFVWQIGKKVNKPELLLLGDPIVADSKGNA"
     gene            complement(960..1847)
                     /locus_tag="VGQ24_06120"
     CDS             complement(960..1847)
                     /locus_tag="VGQ24_06120"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEV8454446.1"
                     /translation="MKVRLLRWWVIGPLLALLWAMLDRPGPRPAHQAEWLDAGGVLVR
                     TVRAGAGDTTLLLLHGYGESLTTWRALFDPLATGAQVIAIDLPGFGGSAKPDVPYSLP
                     AMTERLSRFIDRWTTGPLVVAGHSMGGELAANLALLRPDRVKLLVLIAPAGYRIGLAG
                     IAGSMTRSKARRIGRYLALRSFITPIHDLGWLGEPDSSATYDQTGDANYSRVAARVLE
                     EFDFVALRSRFGELSQPTLLIWGGLDPVVPPSVGDTLSRTIPCVHYLPLSKAFHRPHA
                     ETPDTVIAAIRRFLRRPAC"
     gene            complement(1844..3640)
                     /locus_tag="VGQ24_06125"
     CDS             complement(1844..3640)
                     /locus_tag="VGQ24_06125"
                     /EC_number="1.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HEV8454447.1"
                     /translation="MKRVRPGLAVLLTVIALHPLAGQRAPAPPVPAGPPPGDWPGPGR
                     DYALTRFSQLEQINTGNVAGLRPVWSFSTGALRAHEGSPLVVGSTLYVHTPYPNVVFA
                     LDLGQPGAPIKWRYAGPVPRGTPPLPTGCCDVGSRGLAYHPSGRIFVPLLTGELAALD
                     AATGREIWRVRNADWRTGATLAGAPLVVRDLVIVGVSGAEYGVRGHLTAYDALSGRLV
                     WRGFSTGPDADVLLDGAANPSYPSHQGRDLGVSTWPGEAWRQGGGTTSGWLSYDPALD
                     LVYYGTDQPAPGNPALRLGENKWASTIFARDAASGRVRWAYQVTPHDQWGFGGSNENL
                     LVDLPVRGTAVKALVHFDRNGFAYTLDRTNGRVLVAEKYGPANWARVVDLISGAPQLD
                     PRYAAPPAGSPPATARPGASSWGPTTPDICPGSFGTKFLQPAAFSPVTNHFYVPLNNL
                     CMDLRTGVTSYTAGQPYSGVSLKMKPGPGQTRGRFIAWDAAAGTIAWEIKEPLAAAGG
                     ALATAGGLVFYGTMEGWLKAVDQRSGRELWRFRTPSGILGSPIAFQGTDGREYIAVLS
                     GMGGWWGLGGNGAFPDLATITNTGGVLMVFGL"
     gene            3724..3954
                     /locus_tag="VGQ24_06130"
     CDS             3724..3954
                     /locus_tag="VGQ24_06130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_255349568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:3754..3756,aa:Sec)
                     /transl_table=11
                     /product="SelT/SelW/SelH family (seleno)protein"
                     /protein_id="HEV8454448.1"
                     /translation="MKISISYCMVUNYEPRAAGLAAELRAEFPEAQVQLIKSSGGIFD
                     VTVDGELVFSKKRVGRHARSGEVVGLMRERST"
     gene            3968..5089
                     /locus_tag="VGQ24_06135"
     CDS             3968..5089
                     /locus_tag="VGQ24_06135"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006002 - fructose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent 6-phosphofructokinase"
                     /protein_id="HEV8454449.1"
                     /translation="MRIAISTGGGDAPGLNAVIRAVVLSAFQRGWETFGISRGYEGLF
                     SPMPPANRERRKSDSPAGLIPLGPAEVRGITHLGGTILGTTTRGNPFQWLIRLADGTL
                     CEVDRSDDVVAAFHAHRLDALVAIGGDGSLRIAYELFRKGIPVVGVPKTIDNDVAGTE
                     SSFGFDTAVSTATDALDKIHTTAESHDRVFVVELMGRYAGWIALHGGLSGSADVILIP
                     EIPFDIEKVCEKILEREQRGRRFSIVVAAEGARPKGGQMIYRETAAPGRPERLGGIAE
                     AVAKEIALRTGKETRSMVLGHLQRGGSPTTFDRLLALRFGSAAVRAIGDGEFGCCVVY
                     TPPTVGRIPLIEIIGKSKLVPLDSGIIMTARNLGISLGD"
     gene            5107..5457
                     /locus_tag="VGQ24_06140"
     CDS             5107..5457
                     /locus_tag="VGQ24_06140"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: protein motif:HMM:NF002017.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HEV8454450.1"
                     /translation="MPEKEVALSEAEITDRLKLLRGWEHKAGALQRVYQTDGWRGSIL
                     VANAIAFICESADHHADLTVTWPKVGVALSTHSAGGITDKDFEVATLIETAVLWKPPA
                     DSSLNGPAKPFVKG"
BASE COUNT         1028 a         1834 c         1814 g          937 t
ORIGIN      
        1 cgcattccct ttcgaatcgg cgacgatcgg atcacccagc aggagcagct cgggcttgtt
       61 caccttcttc ccgatctgcc agacaaagct cttcttcgac atcgcgagcc cgaggtactg
      121 acccagccgc tcggtgaatc cggcacgctc ccgctgcaag ttgggcatcg ccgcgatcat
      181 cgccacggaa taccaggtcg gcgggtgggc gtcagggtgc aggatcgttt tggagcccga
      241 gcgcgcaaaa ggcttttcgg ccagtgggct gcgcaggaac gcggataccg acgaggcgat
      301 cttgtgtgcc gccccccgaa gccggggatc ctcgatgtac cccgcctcgg ccagcgcagc
      361 tgcagccgct tcccgcatat gctcccgcgc ccaatccccc gccgcggtcg agtccctgaa
      421 caacttgccg aattcgaatt gcaggaacgg gtcgtcgtcc cgggagagca gccggaacaa
      481 gattcggtca gccagcttga atggccggcc ggttcgaggg tagcccagct gcaggagtcg
      541 ccggtactgc ggaatcgtcc ccacctcctt gatcccgtct ttggccgacg cagctaaccc
      601 cagcaggttc cctccccaga cgcctgtgtc cttttgcttg cggatcaccg cctgggccag
      661 tttggactcg gctacggcca gctcatctgc gacaagggtt tcgggggtgc tggtgccggg
      721 gtaagcaagc tcccggcggg tgcggagacg aatggattcg ctgccgtgtt cgagcagcca
      781 ggcgaccgga acacggtgaa aagtaggcag atccagagtc actctcccgg gttggatgga
      841 tgagcggccg cggagcgggg gcaaaatagt agcctttact cctacgatcc aggggtgcta
      901 tgggttatga gctatgtgct attaactaaa gcagttagcc catcgctcaa agcccttggc
      961 tagcaggccg gtctccgcag gaaccgccgt atcgccgcga taacagtatc cggagtttcc
     1021 gcgtgcggcc tatggaacgc cttggagaga gggaggtagt ggacacaagg gatggtgcgg
     1081 gaaagggtat cacccacgga gggggggacg acaggatcaa gtccacccca gatcagcagc
     1141 gtcggctggc tcagctcccc gaaacgagag cgcagcgcca cgaagtcgaa ctcttcgagg
     1201 actcgggctg ccacccggct gtagttagca tcgccggtct ggtcgtatgt cgcgctcgaa
     1261 tccggctccc ccagccagcc cagatcgtga ataggggtga tgaaggagcg cagcgccaag
     1321 tagcggccga ttctccgcgc cttggagcgg gtcatggatc cggcgatccc agcgagtcct
     1381 atccggtaac ctgccggcgc gatcagcacg agcagcttga cccgatccgg acggagcagc
     1441 gccaagttag ctgcgagctc gccgcccatt gaatgcccgg cgacgaccag tggtccggtc
     1501 gtccaacggt cgatgaaacg ggagagccgc tccgtcatcg ccggcaggga ataggggacg
     1561 tcaggcttgg cgctgccgcc gaagccaggc aggtcaattg ctatcacctg cgcgccggtg
     1621 gcaagcgggt cgaacagagc ccgccaggtt gtgagcgatt ccccatagcc gtgcagcagc
     1681 agtaaggtcg tgtcccccgc gccggcccgt acggtgcgca ccagcacgcc gccggcatcc
     1741 agccactcgg cctggtgagc tggtcgcggt ccgggccgat cgagcatcgc ccagagcaat
     1801 gccaagagag gcccgatcac ccaccagcga agcaggcgaa ccttcataac ccgaacacca
     1861 tgagcacgcc accggtattg gtgatcgtgg cgagatccgg gaatgccccg ttgccaccga
     1921 gcccccacca cccccccatt cccgagagca ctgcgatata ctcgcgcccg tcggttccct
     1981 ggaacgcaat ggggcttccc aggattcctg agggagttct aaatctccaa agctcacgcc
     2041 cgctgcgctg atcgaccgcc ttcagccacc cttccatcgt gccgtaaaat acgaggccgc
     2101 ccgccgtggc caacgcgccc cccgccgcgg ccagcggctc cttgatctcc caggcgatcg
     2161 tgccggcggc cgcgtcccac gcgatgaagc gaccgcgagt ctgccctggt ccgggcttca
     2221 ttttcaggct caccccgctg tagggctggc cggcagtgta actcgtgacg ccggtccgca
     2281 aatccatgca gagattgttg agcgggacat agaaatggtt ggtgaccgga gaaaacgcag
     2341 ccggctggag gaacttggtg ccgaaactgc cgggacaaat gtccggcgta gtcgggcccc
     2401 agctactcgc gccagggcgg gcagtggcgg gcggggaccc ggcaggtggc gcagcgtagc
     2461 gcgggtccag ctggggggct ccggagatca ggtccactac ccgggcccag tttgcggggc
     2521 cgtatttctc cgccaccagc acccgaccgt tggtgcgatc gagcgtgtag gcaaatccgt
     2581 tgcgatcgaa gtgaaccagg gccttgacgg cagtgccgcg caccggcaga tccacgagca
     2641 agttctcgtt gctgcctccg aacccccatt ggtcatgagg agtgacttga taggcccagc
     2701 gcactcggcc actcgcggcg tcgcgggcaa agatcgtgga agcccatttg ttctccccca
     2761 gccggagcgc aggattgcct ggggcaggct gatccgtgcc gtagtagacc aggtcgagcg
     2821 ccgggtcgta ggacagccag ccggaggtgg tgcccccacc ctgccgccat gcttcgcccg
     2881 gccaggtgct cactccgagg tcccggccct ggtgcgaggg ataggatgga ttggcggcgc
     2941 cgtcgagcaa cacgtcggca tcgggccccg tgctgaagcc gcgccacacc aggcggccgc
     3001 tcagggcatc gtaggctgtc aggtggccgc gcacgccgta ctccgcgccg gacaccccga
     3061 cgatgaccag gtcgcgcacg acgaggggag cgcccgccag cgtggcccca gtccgccaat
     3121 cagcgttcct aacacgccag atttcccgcc cggtggctgc atccaacgcg gcgagttctc
     3181 ccgtcaggag tggcacgaag atcctcccgc tcgggtgata ggccagacca cggctgccga
     3241 cgtcgcagca gccggtcggc agcggcgggg taccgcgtgg aaccggaccg gcgtagcgcc
     3301 acttgatcgg cgcgccaggc tggcccagat ccagcgcgaa caccacgttc gggtagggcg
     3361 tgtggacata gagcgtggaa ccgacgacca gcggactgcc ctcatgagca cggagtgcgc
     3421 cggtcgagaa gctccatacc ggacgaagcc ccgccacgtt ccccgtgttg atctgctcga
     3481 gctgactgaa tcgcgtcaga gcgtaatcgc gtcccggtcc cggccaatca cccggcgggg
     3541 gaccggcggg gaccggtggc gcgggggccc gctgtcccgc cagggggtga agagcaatca
     3601 ccgtcaggag gaccgccaac ccagggcgca cgcgcttcat gcgcgcatat taatcggtcc
     3661 cttggccccc gtccggcggc aaactaggat tcggccgctg ggtaacctaa aacgaggcca
     3721 gtcatgaaga tcagcatcag ctactgcatg gtgtgaaact acgagccccg cgccgccggt
     3781 ctggcggcgg agctccgcgc cgagtttccc gaggctcaag tccagctgat caaatcctcg
     3841 ggtggcatct tcgatgtgac ggtcgacggg gaactggtct tttcgaaaaa gcgggttggc
     3901 cggcacgccc gctcggggga agtagttggg ctcatgcggg agcgaagcac gtgaacttgg
     3961 ggatcgcttg agaatcgcga tttctacagg tggcggggat gctcccggcc tcaacgccgt
     4021 gatccgcgcc gtggtgcttt ccgcttttca gcgtggctgg gaaaccttcg gcatcagccg
     4081 cggctatgag ggactctttt ccccaatgcc accggccaac cgggagcgcc gaaaaagcga
     4141 ctcccccgcc ggactgattc cgcttgggcc agcggaggtc cgcggaatca cccatctcgg
     4201 cggcaccatt ctcggtacaa ctacccgggg caatccgttc cagtggctga tccggctggc
     4261 ggatggaacc ctgtgcgagg tggatcgctc cgatgatgtc gttgccgcgt ttcacgcgca
     4321 ccggctcgac gccctggtcg cgatcggtgg cgatggtagc ctccggattg cgtacgagct
     4381 cttccgtaaa ggcatcccgg tggtgggggt gcccaagacg atcgacaacg atgttgccgg
     4441 caccgagtcc agctttggat tcgataccgc agtgagcacg gcgacggatg cgctcgacaa
     4501 gatccacacc acggccgaaa gccatgatcg cgtgttcgtc gtcgagctga tgggacgcta
     4561 tgctgggtgg atcgcgctcc atggcggcct ttccggcagc gccgacgtaa tcctgatccc
     4621 ggagatcccc ttcgacatcg agaaggtctg cgaaaagatt ctggagcgcg agcaacgcgg
     4681 ccgccgtttc tccatcgtgg tcgcggccga gggcgcccgt ccgaagggtg gccagatgat
     4741 ctaccgcgag acggccgccc ccggccgtcc cgagcgcctg ggcggcatcg cggaagcggt
     4801 cgctaaggag atcgcgctgc gcaccggaaa ggagacccgc agcatggtgc tgggacacct
     4861 ccagcgagga ggctccccta ccaccttcga tcggctcctg gcgctccgtt tcggatcggc
     4921 cgccgttcgc gccatcggcg acggggagtt cggttgctgc gtggtctaca cgccaccgac
     4981 ggtgggccgg atcccgctca tcgagatcat cggaaagtcc aagctcgtcc ctctggacag
     5041 cgggataatc atgacggcca ggaatctggg gatcagcctg ggagactagc caagaacgag
     5101 gacaccatgc ccgagaaaga agttgccttg tccgaagcgg agatcaccga ccggctgaaa
     5161 ctgttgcggg gctgggagca caaggccggc gccctgcagc gcgtctacca aactgatggc
     5221 tggcgcggct cgatactcgt cgccaatgcc atcgccttca tttgcgagtc ggcagaccat
     5281 catgccgacc tcacggtcac ttggcccaag gtcggggtcg ccctctcgac ccacagcgct
     5341 ggcgggatta ccgacaaaga tttcgaggta gcgacactga tcgagacggc cgtgctctgg
     5401 aagccgccag ccgactcgag cctcaatgga ccagccaagc ccttcgtgaa ggggtagcta
     5461 ctccttcatc ccgactcggt accacccgga ctggccggcg ctttcttcga cctccacctc
     5521 gatcgcctgg aggtgactca ggccttcgtc ccgcagatcg ttccgcacca gctgcgcgaa
     5581 atactccgcc aacatctctg cagtggtgtt gct
//
LOCUS       DASYRV010000238         3930 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_925587, whole genome shotgun sequence.
ACCESSION   DASYRV010000238 DASYRV010000000
VERSION     DASYRV010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3930
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_925587"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            76..1737
                     /locus_tag="VGQ24_06145"
     CDS             76..1737
                     /locus_tag="VGQ24_06145"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEV8454451.1"
                     /translation="MTGPNATKYIFVTGGVVSSLGKGIAAASLGRLLVERGLSVTMQK
                     FDPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDRSLSRQNNITTGRIYQT
                     VINKERRGEYLGSTVQVIPHITDEIKSAIRRPAPGHDVVITEIGGTVGDIESLPFLEA
                     IRQFRQEIGRDNVLFIHLTLVPYIAAAGELKTKPTQHSVRDLMEIGIQPDILICRSEQ
                     PLAAEIKRKIALFCNVDFACVIESPDVKSIYEIPVRFFEQGLDREVCQRLRLETREPD
                     LTEWKTITDRILHPKERVRIAVVGKYTDLRDAYKSVQEALIHGGIPSDAKVDIEWIAS
                     DQFTDQATAGRLLGGYDGLLIPGGFGERGIGGMVEAIRWARENDLPFFGICLGLQVAI
                     IEFARNVCRLPDPNSTEFEPNCETPVISLMPSQRDVSDLGGTMRLGAYTARLRPGSRA
                     AQAYGTNEISERHRHRWEVSNAYRDVLAEYGLRLSGQSPDGGLVEVIELPDHAWFIGC
                     QFHPELKSRPTRPHPLFAGFIAAALRRRAAAPARAAAEELARSTR"
     gene            1737..2537
                     /gene="kdsA"
                     /locus_tag="VGQ24_06150"
     CDS             1737..2537
                     /gene="kdsA"
                     /locus_tag="VGQ24_06150"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEV8454452.1"
                     /translation="MGWSFGRTPFLIAGPCVIEPGDVLPRVAEVLARLEHDLGIPVCL
                     KASFDKANRARLGASRGPGMEEGLRALERARATSGLPILTDIHEVHQAAPVAEVADVL
                     QIPAFLCRQTDLLIAAGRTGRPVNVKKGQWMQADGMRGAVDKVRSAGAPEVAVTERGT
                     FFGYGDLVVDMRNFTRLREATGAPVIFDATHAVQQPGRGESGASGGQREFIPPLLAAA
                     AAAGADGFFLETHPDPSRALSDAATQWPLDRLADLVGQTLDVWGRARV"
     gene            2534..3121
                     /locus_tag="VGQ24_06155"
     CDS             2534..3121
                     /locus_tag="VGQ24_06155"
                     /inference="COORDINATES: protein motif:HMM:TIGR01670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HEV8454453.1"
                     /translation="MSNIEPAAARRVRLLGLDVDGVLTDNGVYIGPVAGARVEFKRFD
                     IQDGLGLILLRTAGLPVVWLSGRSSEATALRAAELRVEELLQVPGPRKLAAFEALLIR
                     RGIGWDEVAFVGDDIADLPVLRRVGLPIAVANAVADVKAVAAYVTRAPGGHGAVREVI
                     ELLLRARGEWPDVLERYFAGGVRSERPEMAERTER"
     gene            3118..3687
                     /gene="lptC"
                     /locus_tag="VGQ24_06160"
     CDS             3118..3687
                     /gene="lptC"
                     /locus_tag="VGQ24_06160"
                     /inference="COORDINATES: protein motif:HMM:TIGR04409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HEV8454454.1"
                     /translation="MTALTVRVKARQTILSVLSVLSVLACEDTGVRPTTTVQASDSAD
                     QVLEGFSHYVTHNGILRSRVEADTAFFFEPTQMNELHNVKVVFFDIKGAESSTLTAKR
                     GTYRWQDGSMQASGNVLVVSPDGRRLATEVLRYDNATNTILTDRHFTFDRGEEHLEGN
                     SFRSDPDFRNVVTDRPRGVTGNGMLLPGQ"
     gene            3684..>3930
                     /locus_tag="VGQ24_06165"
     CDS             3684..>3930
                     /locus_tag="VGQ24_06165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454455.1"
                     /translation="MSRRGSGAAGRRGSPLRKTISRWYAFAALRPRCPAAPLWAALGL
                     LVSLTHPAAAQSDRCVFQINNVDRQGSVVETPQGTNYF"
BASE COUNT          669 a         1286 c         1302 g          673 t
ORIGIN      
        1 gcttcccggc gtggatacgg cggaagatct ccgacgggcg gaagctcact ggcacgctta
       61 ccaaggacag ggctaatgac gggtccaaac gcgaccaaat atattttcgt gaccggcggc
      121 gtcgtgtcct cactgggaaa gggcatcgcc gccgcttctc ttggacggct cctagtcgaa
      181 cgcggactga gcgtcaccat gcagaagttc gacccctaca tcaacgtgga ccccgggacc
      241 atgtcgccat ttcagcacgg tgaggtcttc gtgaccgatg acggcgccga gaccgatctc
      301 gacctgggtc actacgagcg cttcatcgac cggtctctct cgcgccagaa caacatcacc
      361 accggacgga tctatcaaac ggtgatcaac aaggagcgcc gcggcgaata tctcggctcg
      421 acggtgcagg tgatccccca catcaccgac gagatcaaga gcgctatccg ccggcccgcc
      481 ccgggccatg atgtggtcat caccgagatc ggcggcaccg tcggcgacat cgaatcactg
      541 cctttcctcg aggccatccg gcagttccgc caggagatcg gccgggacaa cgtgctcttc
      601 atccacctca cgctggtgcc ctacattgcg gccgccggcg agctcaagac caagccgacc
      661 cagcactccg ttcgcgatct gatggaaatc ggaatccagc ctgacatcct gatctgccgg
      721 agcgagcagc cgcttgccgc ggagatcaag cgaaagatcg cgctgttctg caatgtggac
      781 ttcgcctgcg tgatcgagag tcccgacgtc aagtcgattt acgagattcc cgtccggttc
      841 ttcgaacagg gactggatcg cgaggtatgc cagcggcttc ggctggagac ccgggaaccc
      901 gatctcaccg agtggaagac aatcaccgac cggatccttc atcccaagga gcgggtccgg
      961 atcgcggtgg tcggcaagta caccgatctg cgtgatgcgt acaagtcggt ccaggaagcg
     1021 ctgattcacg ggggcatccc gagcgacgcc aaagtggaca tcgagtggat tgcgagcgac
     1081 cagttcaccg atcaggccac cgcggggcgg ttgctcggcg gctatgacgg tctgctgatc
     1141 cccggcggct tcggcgagcg aggcatcggc ggcatggtcg aagccattcg gtgggcccgg
     1201 gagaatgatc ttccgttctt cggcatctgt cttggccttc aggttgccat catcgagttc
     1261 gcccgcaacg tctgccgcct ccccgacccc aacagcaccg aattcgagcc caactgcgag
     1321 acacctgtca tctccctgat gccttcccag cgcgacgtgt cggacctcgg tggcaccatg
     1381 cgcctcggcg cctacaccgc gcggctcagg cccggctccc gggcagccca ggcctacggc
     1441 accaacgaaa tcagcgagcg ccaccgccac cgctgggaag tgagcaacgc ctaccgggac
     1501 gtgctggcgg agtatgggct ccggctctcc gggcaatctc ccgacggagg cctggtcgag
     1561 gtgattgagc tgcccgatca tgcctggttc attggctgcc aattccatcc cgagctgaag
     1621 tcgcggccga cccggcccca cccgctgttt gcgggcttca tcgcggccgc cctgcgccgc
     1681 cgggccgccg ctccggcgcg tgccgctgcg gaggagctgg ctcggagtac gcgctgatgg
     1741 ggtggtcctt cggacgcaca ccgttcctca tcgccgggcc ctgtgtcatc gagcccggcg
     1801 acgtgctgcc cagggtggct gaggtgctcg ctcgtctcga gcacgacctc ggcattccgg
     1861 tctgcctgaa agccagtttc gacaaggcca accgagcccg gctcggcgcc agccggggcc
     1921 cggggatgga agaaggactc cgtgcgctgg agcgggcgag ggccaccagc gggctgccga
     1981 tcctcaccga catccatgag gttcaccagg cagctccggt agccgaggtg gccgacgtcc
     2041 tccagatccc cgctttcctg tgccggcaga ccgacctcct gattgcggcg ggacgtaccg
     2101 gaaggccggt caacgtgaag aaggggcagt ggatgcaggc cgatggcatg cgcggcgctg
     2161 tggacaaggt tcggagtgca ggggcgccag aggtggccgt gactgagcgg ggcaccttct
     2221 tcgggtatgg ggatcttgtg gtggacatgc ggaacttcac ccgtttgcgt gaagccaccg
     2281 gcgccccggt gatcttcgac gccacccacg ctgtccagca gccgggccgg ggcgagtccg
     2341 gagccagcgg cggccagcgc gagttcatcc cgccgctgct cgccgccgcc gcggctgcgg
     2401 gtgccgacgg gttctttctc gagacccatc ccgacccttc gcgggccctg agtgacgcgg
     2461 cgacccagtg gcccctcgac cggctggccg atttagtggg ccagacgctc gacgtctggg
     2521 gcagggcgcg ggtatgagca atatcgagcc tgctgccgcc cggcgcgtcc ggctgctcgg
     2581 cctggacgtg gacggtgtgc tgaccgacaa tggggtctac atcggtccgg tggcgggagc
     2641 gcgtgtcgag ttcaagcgtt tcgatatcca ggacggactg ggactgattc ttctccgcac
     2701 cgcgggcctc cccgtcgtct ggctcagcgg tcgaagctcg gaagcgactg cactgcgtgc
     2761 ggccgagctc cgggtggagg agctgcttca ggtgcccggg ccccgcaagc tggcggcatt
     2821 cgaagcgctg ctgatacggc gcgggatcgg ttgggacgaa gttgccttcg tgggcgacga
     2881 tatcgccgat cttccagtgc tgcggcgggt ggggttgccc atcgccgttg ccaacgctgt
     2941 cgccgacgtg aaggcggtcg ccgcgtacgt gacccgggcc ccgggtgggc acggcgcggt
     3001 ccgcgaggtg atcgagcttc ttctcagggc gcggggcgag tggccggacg ttctcgagcg
     3061 ctacttcgcc ggtggggtca ggtcagagag gccggagatg gcggagagga cggaacggtg
     3121 accgctctca cagtcagagt gaaggcgcgg cagacaattc tctccgtcct ctccgtcctc
     3181 tccgtcctcg cctgcgagga caccggcgtc cgcccgacca cgaccgtcca ggcctccgac
     3241 agtgcggacc aggtactgga agggttctcc cactatgtca cccacaacgg gattctgcgc
     3301 agccgggtgg aagcggatac cgcgttcttc ttcgagccga cccagatgaa cgagctgcac
     3361 aacgtgaagg tcgtgttctt cgatatcaag ggagcggaaa gctcgaccct gacggcaaag
     3421 cgggggacct accggtggca ggatggatcg atgcaggcct cggggaacgt gctcgtggtg
     3481 tcacccgatg gacgccggct ggccaccgag gtgctcaggt atgacaatgc gaccaacacc
     3541 atcctgaccg accgccactt taccttcgac cggggcgagg agcacctcga gggcaacagt
     3601 ttccgctccg atccagactt tcgcaatgtc gtgaccgatc gtccgcgggg cgtaacgggc
     3661 aacggcatgt tgctgccggg acaatgagta ggcggggcag cggggcagcg gggcggcggg
     3721 gcagtccact ccgcaaaacg atttcgcggt ggtatgcttt tgccgccctg cggccccgct
     3781 gtcccgctgc cccgctttgg gccgccctgg gactactggt ctcgcttacc cacccggcgg
     3841 cggcccaaag cgaccgctgt gtctttcaga tcaacaacgt cgatcggcaa ggcagcgtgg
     3901 tcgagacgcc ccaggggacc aactactttg
//
LOCUS       DASYRV010000239         4593 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3164062, whole genome shotgun sequence.
ACCESSION   DASYRV010000239 DASYRV010000000
VERSION     DASYRV010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4593
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3164062"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..650
                     /locus_tag="VGQ24_06170"
     CDS             <1..650
                     /locus_tag="VGQ24_06170"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEV8454456.1"
                     /translation="SMTHIIFRPQWDMPRRILVDEVIPKVRENIYYLAEHGYEVVDTA
                     RNAVVTDPAAIDWSDLDTTNIPFRVRQKAGKGNALGNVKFMFPNQFSIYLHDTPADHL
                     FERRERTLSHGCVRVEDPVKLAGYVLRGQEDWDEDKIREAMQPVDSGAVESVPVDLEE
                     PIPVYLVYLTAFVRDGVLHFRDDPYRKDARAMGTMGKPAPLDRSECKELEDLAGG"
     gene            653..1672
                     /locus_tag="VGQ24_06175"
     CDS             653..1672
                     /locus_tag="VGQ24_06175"
                     /inference="COORDINATES: protein motif:HMM:NF019896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-Ala-D-Ala carboxypeptidase family
                     metallohydrolase"
                     /protein_id="HEV8454457.1"
                     /translation="MRRALAAALLGVIPLSITEHYRGPVPTKDPHDTLVAAPDSAPSL
                     HSAPGRVSFAVKFKEEVSPFPVLAMFVIPGEHVPLEAVLTDSTVRYTAEAGGGRLARL
                     GSSRWRWTAPKEKGLYPIWVRDSASGETITLNAFVLVPMPTAATIGGFMVGRYESRPL
                     RGDPTYARPTGFVEVTETNRGTLVAPHFTIGQFVSKQGGGYPKYLVLRERLLLKLEML
                     LEEARSAGLPASTFRILSGYRTPFYNRSVGNETRYSRHVYGDAADIYVDEDGDGTMDD
                     LDGDGRITLDDARTLAAVVERLSQKSWYQPFEGGLGLYKANAAHGPFIHVDVRGYPAR
                     WGPSF"
     gene            complement(1620..2306)
                     /locus_tag="VGQ24_06180"
     CDS             complement(1620..2306)
                     /locus_tag="VGQ24_06180"
                     /inference="COORDINATES: protein motif:HMM:NF018984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABATE domain-containing protein"
                     /protein_id="HEV8454458.1"
                     /translation="MSQNSLSPAPDLPFQYVGGDPALDLVNTVDWTSRGPEQDRLTDF
                     DRLTRWAEGAGVLSPKIGAALRRRAATKPREAESAWRTALQVRQVLQRLFSSIAEGKP
                     AGDELNDFNRLLVRALEHMRVVSAGGGRTGNPKLRLGWEHLETRLDAVIWPVLWSAAS
                     LIFSDEASLIRICGGVDCGWIYVDRSRNRLRRWCQMETCGTREKSRRRYERIKRTAPT
                     SPGSLARPRE"
     gene            2519..2842
                     /locus_tag="VGQ24_06185"
     CDS             2519..2842
                     /locus_tag="VGQ24_06185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454459.1"
                     /translation="MIARSWRGATKAKDGEAYLEYLHRTGFAEYRKTPGNRGVLGLRR
                     IVNDRAEFLLVSLWESEEAVRQFAGDDIEKAVFYPEDDRFLVERDDRVSHYEVVYDTA
                     PVPQG"
     gene            2814..3809
                     /locus_tag="VGQ24_06190"
     CDS             2814..3809
                     /locus_tag="VGQ24_06190"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEV8454460.1"
                     /translation="MTPHPSHRAEHSASRLGIVAAFAAIYLFWGWTFLALRYAVQEVP
                     PLLTIATRCVGGALLLYAWLLWRGGLERPTRRQWATSAIAGAFLFVGGHGVLAWAEQR
                     VSSGQAALFMTSIPLWLVLITSVRERRAPSRMVIAGLALGILGVALLVRGNGEWSGTL
                     LDRLGLIGSGLSWAIGSVIARDGARPASAAQSTTMQLAAGGAAVVALSLITGDLTGWS
                     PAQLTPRGATSVLCLVVAGTVLGFGAYTWLLRVTTPAAVGTYAFVNPVVALSLAWIVG
                     DEPFSVRTIVAALIVLGAVVLIWTSSARGPRLHRTAEPPIPISPSSLRALSTSVH"
     gene            complement(3865..4311)
                     /locus_tag="VGQ24_06195"
     CDS             complement(3865..4311)
                     /locus_tag="VGQ24_06195"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030638 - polyketide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HEV8454461.1"
                     /translation="MPAQATAVSPQALIDAAKAPVLAYNDKNWQKLKASITPDFVYDE
                     VATRRRVQGADAVIPVWQGWAQAFPDSKATFHSAMVSGDSVVLEVTWKGTHKGQLQTP
                     NGPIAATGKPIEIRACAIIEIAGEKAKLQRHYFDMATLFEQLGVKP"
BASE COUNT          762 a         1475 c         1510 g          846 t
ORIGIN      
        1 actcgatgac ccacatcatc ttccggccgc agtgggacat gccgcgtcgg atcctggtgg
       61 atgaggtgat tcccaaggtg cgggagaaca tctactacct cgcggagcac gggtacgagg
      121 tggtcgacac cgcacgcaac gcggtggtga ccgatccggc ggcgatcgac tggtccgatc
      181 tggacacgac gaacatcccc ttccgggtgc ggcagaaggc cgggaagggc aacgcgctgg
      241 gcaacgtgaa gttcatgttc cccaatcaat tctccatcta cctgcatgat actccggccg
      301 accatctctt cgagcggcgg gagcgcaccc tgagtcacgg ctgcgtacgg gtggaggacc
      361 ccgtcaagct ggcaggatat gtcctgcgcg ggcaggaaga ctgggacgag gacaagatca
      421 gggaggccat gcagccggtg gattccggcg ccgtcgagtc ggtcccggtt gacttagagg
      481 agccgatacc ggtgtacctg gtctatctga ccgccttcgt gcgggacggg gtgctccact
      541 tccgcgacga tccttatagg aaggatgctc gcgcgatggg caccatgggc aagccggcgc
      601 cactcgaccg ttccgagtgc aaggagctcg aagatctcgc agggggttga gcatgaggcg
      661 ggcactggca gccgcactgc tgggagtgat tccgctctcg atcacggagc actaccgcgg
      721 gcctgtgccc acgaaagatc cgcacgacac tctcgttgcc gcgcccgata gtgctccctc
      781 gctgcactca gcccccggga gagtctcctt cgccgtcaag ttcaaggaag aggtgagccc
      841 ctttccggtg ctggcgatgt tcgtcatccc gggggagcat gttccgctgg aggcggtgct
      901 caccgactcg accgtccgct acaccgcgga ggccgggggc ggccggcttg cgcggctggg
      961 gtcgagccgg tggcgctgga ccgcgccgaa ggagaaggga ctctatccaa tctgggtgcg
     1021 cgattcggcc tcgggcgaga ccatcaccct caacgccttc gtgctggtac ccatgcccac
     1081 cgcggcgacg atcggcggct tcatggtggg ccgctacgag tctcggccgc tccgaggaga
     1141 cccgacctat gcccgaccga ccggcttcgt cgaggtcacc gagaccaatc gggggacgct
     1201 ggtagcaccg cacttcacca tcgggcagtt cgtctccaag cagggcgggg ggtaccccaa
     1261 gtatctcgtg ctccgggagc gcctgctgct caagctggag atgctgctgg aagaggcgcg
     1321 gagcgccggc cttcccgcca gtaccttccg gatcctgagc ggctaccgca cgccgtttta
     1381 taaccggtcg gtcggcaacg agacccgcta tagccggcat gtctacggtg acgcggccga
     1441 catctacgtg gatgaggacg gcgacgggac gatggacgac ctcgacggcg atggtcggat
     1501 cacgctcgac gacgcgcgga ccttggcagc ggtggtcgag agactctcac agaagagctg
     1561 gtaccagccg ttcgagggcg ggctcggcct ctataaagcc aacgcggcgc acgggccatt
     1621 cattcacgtg gacgtgcgag gctacccggc gaggtggggg ccgtcctttt gatccgctcg
     1681 taccgccggc gcgatttctc ccgggtccca caggtctcca tctggcacca gcggcggagg
     1741 cggttgcggc tccgatcgac gtatatccag ccgcagtcca cgccgccgca gatccgaatc
     1801 agcgatgcct catcggagaa gatcagcgat gcggccgacc atagcaccgg ccagatcacg
     1861 gcgtcgagtc tggtctccag gtgctcccat ccaagccgca actttgggtt gcccgttcgt
     1921 ccaccgcccg ccgagaccac acgcatgtgc tcgagcgccc ggaccagcag ccggttgaag
     1981 tcattcagct catcgccggc cggcttgccc tcagcgatcg agctgaagag tcgctgcagc
     2041 acctgacgca cctgcagcgc cgtccgccat gcgctctccg cctctcgcgg cttcgtggcg
     2101 gccctcctcc gcaacgcagc cccgatcttc ggagacaaga cgcccgcccc ctcggcccac
     2161 cgggtcaacc gatcgaagtc ggtcagccgg tcttgctccg gcccccgact ggtccagtcc
     2221 acggtgttga ccaggtccag agccggatcg ccaccgacgt actggaaggg aagatccggg
     2281 gcaggtgaga gcgagttctg tgagatgctg agcctcctag tgggtggtca ttccgagcgt
     2341 agcgaggaat cggcccgccc ggacatttgg gctcccattt cctaacctgc acgccacccg
     2401 attcctcgct acgctcggaa tgacgcgtca ccagtatcat gcccttgaca ggtgataatc
     2461 taatcagtag agttgcacca gtaaaggcgc ttatactggt gcagagaagg agtcactcat
     2521 gatcgctcga agctggcgcg gagccaccaa ggccaaggat ggcgaggcct acctggagta
     2581 cctccaccgg accggcttcg ccgagtaccg aaagacgccg ggtaatcgcg gggtactggg
     2641 ccttcggcgg atcgtgaacg atcgggcgga attcctcctg gtctcgctct gggaatcaga
     2701 ggaggcggtc cggcagttcg cgggcgatga catcgagaag gcggtcttct accctgaaga
     2761 cgaccggttc ctggtcgagc gagacgatcg cgtgtcccac tacgaggtgg tctatgacac
     2821 cgcacccgtc ccacagggct gagcactccg cctcgcggct ggggatcgtc gcggcctttg
     2881 ccgcgatcta tctcttctgg ggctggacct tccttgccct ccggtatgcc gtccaggagg
     2941 tgccgccgct gctcaccatc gccacccgct gcgtaggtgg tgcgcttctg ctctacgcgt
     3001 ggttgctctg gcgcgggggg ctcgagcgcc cgacccgacg gcagtgggcg acatccgcca
     3061 tcgccggcgc gtttctgttc gtgggcggtc acggtgtgct ggcgtgggcc gagcagcggg
     3121 tctcctcagg ccaggccgcg ctcttcatga cctcgatccc actctggctg gtgttgatca
     3181 cctcggtccg ggagcgccga gcgccgtcga gaatggtgat cgccggcctg gcgttgggaa
     3241 tcctcggtgt ggccctgttg gttcggggga acggggaatg gtccggaacc ctgctggacc
     3301 ggctgggact catcggcagc ggtctcagct gggcgatcgg atcggtcatc gcccgggatg
     3361 gcgcacggcc ggcgtccgct gcgcagtcca ccacgatgca gctggccgcg gggggcgccg
     3421 cagtggtcgc tctcagcctg atcaccgggg acctcacggg ttggagtccc gcccagctca
     3481 cgccccgtgg cgccacgtcg gtcctctgtc tggtagtagc cggaacggtg ctcggcttcg
     3541 gcgcctacac ctggctcctc cgggtcacta ctccggccgc ggtcggcacc tacgccttcg
     3601 tgaatccggt ggtcgcgctg agcctggcgt ggatagtcgg cgatgagccc ttctcggtgc
     3661 ggacgatcgt ggctgcgctg atagtgctcg gagcggtggt attgatctgg acgagctcgg
     3721 cgcggggacc taggctgcac cgcaccgcgg aaccgccaat cccaatttca ccatcatctt
     3781 tgagagctct gtccacttcc gtgcactgat ttgatcggcc agccatcgcc acgcccacga
     3841 tgggcaccgg gccgggcgca gggctcaggg cttgacgccg agctgctcga atagcgtggc
     3901 catgtcgaag tagtgacgct gcaacttcgc cttttccccg gctatctcga taatcgcgca
     3961 ggcccggatt tctatgggct taccggtggc cgcgatggga ccgtttgggg tctgcaactg
     4021 ccctttgtgg gtacccttcc aggtcacttc caacaccacg ctgtccccac ttaccatggc
     4081 gctatggaag gtcgccttcg aatcggggaa tgcctgggcc cagccctgcc agactgggat
     4141 gaccgcgtcg gccccctgca ccctccgccg ggtggcgact tcatcataga cgaagtctgg
     4201 ggtgatgctg gcctttagtt tctgccagtt cttgtcgttg tacgcgagga cgggggcctt
     4261 ggcggcgtcg atgagcgctt ggggtgacac cgcggtcgct tgtgcgggca tgataccctc
     4321 ctgaggtggt agtctacgcc aggttttcgg aagggcggac aacattcatc gtggtaccgc
     4381 cactgtcaat caggcggacg ggcggacagg cggacgggcg gacagcgagg ggctatagat
     4441 caggtgtgag tacgaccgtt tactgcctgg tacagccccc aagtcagctt ggctgcccga
     4501 acccggagtg tctccagttt ttcggacgct tctgacgtga ggagtgttcg atcgcgggca
     4561 aaacgaaggc cgtacccgat ctctgccaaa gaa
//
LOCUS       DASYRV010000240         3400 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2168115, whole genome shotgun sequence.
ACCESSION   DASYRV010000240 DASYRV010000000
VERSION     DASYRV010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3400
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2168115"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..417)
                     /locus_tag="VGQ24_06200"
     CDS             complement(<1..417)
                     /locus_tag="VGQ24_06200"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8454462.1"
                     /translation="MLDISEFFGETTGGVRTYLLQKARYVEARPGLRQVLVVPGARDS
                     IHQADGVRCYRLHGPSIPTQKPYRFMLATRSTSRIVAHERPDLIEVGSAWCAPWLVHL
                     ATRRLDVPTVWFYHSNFPRVIAPWPAAAGSVRRAASG"
     gene            complement(759..1406)
                     /locus_tag="VGQ24_06205"
     CDS             complement(759..1406)
                     /locus_tag="VGQ24_06205"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEV8454463.1"
                     /translation="MSKLEVVSLTNGQFAENCYLVADGTTGEAVIIDPGQEPAAFLAA
                     LKHHGWDLRAIWLTHAHVDHIMGVGAVHRSTGAPIHLHPLDRPLYDALPQFGAWVGMR
                     LESPPAPRFELAAGQTLRVGGLEFSVRFTPGHSPGSVSFFGEGRIFGGDVLFNGSIGR
                     TDLPGGDMATLVASIHSEFLSLPDSTVVHSGHGPDTTIGVERMTNPFLTGAYRVG"
     gene            complement(1399..2367)
                     /gene="trxB"
                     /locus_tag="VGQ24_06210"
     CDS             complement(1399..2367)
                     /gene="trxB"
                     /locus_tag="VGQ24_06210"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEV8454464.1"
                     /translation="MTRSEELDVIIVGAGPAGLCAAIYAGRGMLRSVLLERGVPGGEL
                     LNTEWIDDYPGFEHVLGQQLADLMTTHAIKFGADIRQEPVEAIVRRDDGIFEVVTGMD
                     RVYEAPAVILTAGGTPTKLEVPGEVEYAGRGVSYCAVCDGAFFKGETLAVIGGGDAAV
                     EEADYLTRYGSKVYVIHRRDEFRASKLLQERLFANPKIEVIWNKRVREFKGGPAGLQS
                     VELQDTLTGEHSSLAATGAFVFIGFRPNTGLVKQHAEHDPNGYLITDDRMMTSIPGLF
                     AAGDVRAQLTRQITTAVGDATTAAIAVEKYLTDRRSRLELKAKVGV"
     gene            complement(2528..3283)
                     /locus_tag="VGQ24_06215"
     CDS             complement(2528..3283)
                     /locus_tag="VGQ24_06215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454465.1"
                     /translation="MVDDSSDRVAFRDVVIVGGGCYGTFYAAQLERARERGRALFRQL
                     LIVDRDPECQFARELGADETRQLVVQEWGEFFDDYLEHVVPPSPGEPGDTIVPSPLMP
                     HLMYQWLVRRAQTRWPHRLIETRPVSRGPGTPYDVSAPDGTRYVSYADWTCPTHCIEP
                     AVCPVIRAPRTWEMSEAMEALTRALDSSRPTAGPVLFVCEHRVFGVGMFDVAAVLEGD
                     AVVAEAGRAQSPVDVLVGTVSSCHGAVNLLHLG"
BASE COUNT          623 a         1107 c         1134 g          536 t
ORIGIN      
        1 cccactcgcg gctcgccgga ctgatccggc ggccgcaggc cagggggcaa tgacccgggg
       61 aaagttgctg tggtagaacc agaccgtggg tacatcgagc cgccgggtgg cgaggtgcac
      121 cagccaggga gcgcaccagg cactgccgac ctcgatgaga tcggggcgct cgtgagccac
      181 gatccggctg gtcgagcggg tcgcgagcat gaagcgatac ggcttttggg tggggatgga
      241 cggaccgtga agccggtaac agcggacgcc atcggcctgg tgaatcgagt cgcgcgcgcc
      301 cggtaccacc agaacctgac gcagcccggg ccgcgcctcc acgtagcggg ccttctgaag
      361 caggtaggtg cggaccccac cggtggtctc gccgaagaac tcggagatgt cgagcacgcc
      421 gagtgcatcg ggccggagcc gccgaggcag agtgctgcga gagatgtcca gagatcccgc
      481 cgcctcagcg ccggcaaacg actcgagatc cggcagcgtc cagacggcgg gctcagtcag
      541 agcagtcccc gagcgggtag agggtaccgc agttgagaca gggatttttg cagccccagg
      601 cctggctggg gagggggaag ccgcagcggt tacatgtagg cggggaagcg ggacggcggg
      661 gcggcggggc ggtcgaggtg ccccgacctt cgcgctccaa tcggggcgtc gggttgtgat
      721 gctgccccgc tgccccgccg ccccgccgcc ccaccgtcct acccaacccg atacgctccc
      781 gtcaaaaacg gattggtcat gcgctcgacg ccgatcgtag tgtcggggcc gtggccgcta
      841 tggacgacgg tagagtcagg gagtgaaagg aattccgagt ggattgaggc cacgagggtc
      901 gccatgtccc cgccgggtaa gtcggtgcgg ccgatggatc cgttgaacag tacgtcgccg
      961 ccgaagatcc ggccctcccc aaagaagctg acgctgcccg gcgaatgccc tggggtaaac
     1021 cgaaccgaga attcgagccc gccaacccgg agcgtctgcc ccgccgccag ctcgaatcga
     1081 ggagccggag gactctcgag ccgcatcccg acccaggcgc cgaactgagg caaggcatcg
     1141 tagagaggcc ggtcgagcgg atgaagatgg atgggcgcgc cggtggagcg gtggactgcc
     1201 cccacgccca tgatgtggtc gacgtgagcg tgtgtgagcc agatggcccg gagatcccag
     1261 ccatggtgct tgagcgctgc caggaacgcc gccggctcct gtccgggatc gatgatcacg
     1321 gcctcgccgg tcgtcccgtc cgccactaga taacagttct cggcgaattg cccgttcgtg
     1381 agcgagacga cttcgagctt agacaccgac ctttgccttc aactcgaggc ggctccgccg
     1441 gtcggtcagg tacttctcca ccgcgatggc cgccgtggtc gcgtccccca cggccgtggt
     1501 gatctggcgg gtgagctgcg ccctgacatc gccggcagcg aagagaccgg gtatcgacgt
     1561 catcatgcga tcgtcggtga tcaggtaccc gttcggatcg tgctcggcgt gctgtttgac
     1621 caggccggtg ttgggacgaa agccaatgaa gacgaacgcg ccggtggcgg caaggctgga
     1681 gtgctccccg gtcaaggtgt cctgaagctc gacggactga agcccggccg gtccgccctt
     1741 gaattccctg actcgcttgt tccagatcac ctcgatcttg ggattggcga acagccgctc
     1801 ctgcagcagc ttcgaggccc ggaactcatc gcgccggtga atgacgtaaa ccttcgagcc
     1861 gtatcgggtg agataatccg cctcctccac cgccgcgtca ccgcccccga tgaccgcaag
     1921 ggtctcgccc ttgaagaagg cgccgtcaca cacggcacag tacgaaaccc cgcgtccggc
     1981 atactccact tcaccgggca cctcgagctt ggtgggcgta ccgccggcgg tcaggatcac
     2041 tgcgggcgcc tcgtagaccc gatccatccc ggtgacgact tcgaagattc cgtcatcccg
     2101 ccgcacgatc gcctcgaccg gctcctggcg gatgtctgcg ccgaatttga tcgcgtgggt
     2161 ggtcatgagg tcggcgagct gttgcccgag gacgtgctcg aatcccggat agtcgtcgat
     2221 ccattcggtg ttgagcagct cgcccccggg aacgccgcgt tccagcagca ccgaccgcag
     2281 catcccccga ccggcataga tggcggcgca gagcccagcg ggcccggcac ctacgatgat
     2341 gacgtccagt tcttcgctgc gagtcatccc ttctcccgat gagcatgcgt gaaaacgtct
     2401 tggccttcca aaatatagaa cgtccgggag ttcccggctg ggaggctatt ggctgttggc
     2461 tgttggctat cggctgttga cgaagggaac tatgtcactg aacggaatag cccatagccc
     2521 atagccctta ccccaaatgc agcagattga ccgccccatg acagctggaa acagtgccca
     2581 ccagcacgtc taccggcgac tgcgcgcgtc cagcttccgc tacgaccgca tcgccctcga
     2641 ggaccgctgc gacatcgaac atccccacgc cgaacacccg gtgctcgcag acgaagagga
     2701 cggggccggc ggtgggtcgt gagctatcga gagcgcgcgt cagcgcttcc atggcctccg
     2761 acatctccca ggtccgcggc gcgcggataa cggggcagac ggccggctcg atgcagtgag
     2821 tgggacaggt ccagtcggca tacgacacgt atcgggtgcc atcgggggcg ctcacatcgt
     2881 atggcgtgcc cggcccccgg ctgaccggtc gagtctcgat gaggcggtgg ggccagcggg
     2941 tctgcgcccg ccggaccaac cactggtaca tcagatgcgg catgagcggt gacggcacga
     3001 tggtgtcgcc cggctcaccg ggagatggcg gcacgacgtg ttcgagatag tcatcgaaga
     3061 attcgcccca ctcctgcacc accagctgcc gggtctcatc ggctccgagc tcacgggcga
     3121 actggcattc agggtcccgg tcgacgatca ggagttgccg gaacagcgct ctgccgcgct
     3181 cgcgggcgcg ctccaactgg gcggcgtaga aggtcccgta gcagccgcca cctacgatca
     3241 cgacatcgcg gaatgcgacc ctatcggatg aatcgtccac catcgaccac caggacctgt
     3301 ccggtcacga agtctccccc ctccagaagg tacagcaggg cggagacgac atccgaagga
     3361 tcgccgagac gccggagggg cgtggagcgg gccagacgat
//
LOCUS       DASYRV010000241         3426 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_506920, whole genome shotgun sequence.
ACCESSION   DASYRV010000241 DASYRV010000000
VERSION     DASYRV010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3426
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_506920"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1162
                     /locus_tag="VGQ24_06220"
     CDS             <1..1162
                     /locus_tag="VGQ24_06220"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014414.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cyclopropane-fatty-acyl-phospholipid synthase
                     family protein"
                     /protein_id="HEV8454466.1"
                     /translation="FPERPFAIEFWDGTSVPATRGNGPVFAVRSPRAVSHLLRAPGQL
                     GLGRAYVSGELAVDDIDAVNRLIYEWTPPALPARSRISLMLAAARAAGPRLPPTRPAA
                     ELRPRGRLHSRARDARAVRHHYDLSNEFFALFLDRSMTYSCAFFSRDGASLESAQEAK
                     LELTCRKLRLERGQRVLDVGCGWGSFAIHAAARHGVSVLGITLSEAQATLARARVTEA
                     GLDDRVSIRVLDYRDLRGERFDAIASIGMVEHVGAERIDLYAARLASLLRPGGRLLNH
                     GVAHLHQSVAKPGPFTDRYVFPDSNPLHLSRILLALEKAGFVTEHVEEFGADYAETLR
                     HWAKRLDEHREEAVRLAGEERVRVWRLFLRSARSAFLTGYDSIYQVQSRLGP"
     gene            complement(1467..1979)
                     /locus_tag="VGQ24_06225"
     CDS             complement(1467..1979)
                     /locus_tag="VGQ24_06225"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEV8454467.1"
                     /translation="MHAKTLAYQLELSSKILEMNTGDVSHEESLVTPPKGGSCLNQVL
                     GHLTRTRNMALGSMGQPSPYPMEEFDPYDDRTGVPFSREKALSFDELRRRYKAMQEPL
                     VRTIEGMSPETLASKPPRKFTGDPNETVGSNLATFVFHECYHVGQTGVLRRVAGKPGV
                     IKPPAEPART"
     gene            complement(2104..3276)
                     /gene="amrS"
                     /locus_tag="VGQ24_06230"
     CDS             complement(2104..3276)
                     /gene="amrS"
                     /locus_tag="VGQ24_06230"
                     /inference="COORDINATES: protein motif:HMM:TIGR04337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system radical SAM enzyme"
                     /protein_id="HEV8454468.1"
                     /translation="MPDNLAAHASTTLGASLDTRTTEGKLWEPLPDAALRCVACGHRC
                     LIREGRRGICRVRFNQGGRLLVPRGYVAALQCDPVEKKPFFHVLPGADALTFGMLGCD
                     FHCGYCQNWLTSQSLRDERATTDATDITAEALVSLAERQDARLIVSSYNEPLITAEWA
                     MEVFQPARSRGFLTGFVSNGNATAEALDFIRPRTDCYKIDLKTMNDRHYRQLGGVLAH
                     VLDAIGLVYERGIWLEVLTLVIPGFSDDPAELREAARYIAGIDRNIPWHVTAFHEDYK
                     FWGMGNTTADVLIRACEIGAEEGLNFVYAGNLPGRVGRWEHTWCPACQALLVERLGYH
                     ILRNRIGTGGACPDCGARVPGIFANPRGSSEPSRGHGTIRAVDTAAVRRQGGRLSP"
BASE COUNT          552 a         1138 c         1127 g          609 t
ORIGIN      
        1 ctttcctgaa cgtcctttcg ccatcgagtt ctgggatgga acctccgtgc cggcgacgcg
       61 tggcaacggc cccgtcttcg cggtccgctc gccccgcgcg gtttcccatc tccttcgcgc
      121 acccggccag ctcggcctcg gccgggccta cgtctccggc gagttggcgg tagacgatat
      181 cgacgcggtg aaccggctga tctacgagtg gaccccgccc gctctccctg cccggagccg
      241 gatcagcctg atgctcgccg ccgcccgcgc ggccggcccc agacttcctc caacccggcc
      301 tgctgccgag ctcagacctc gaggcaggct acactcccgg gcgagggatg cccgtgcggt
      361 ccgccaccac tacgatctct ccaacgagtt ctttgccctg ttcctcgatc ggtccatgac
      421 ctacagctgc gccttctttt cccgggatgg cgcgtcgctg gaatcggccc aggaggcgaa
      481 gctggagctg acctgccgca agctcaggct cgagcgcggc cagcgggtgc tggatgtcgg
      541 atgcggctgg ggcagcttcg ccatccacgc cgccgctcgc cacggcgtca gcgtcctggg
      601 catcaccctc tcggaggcgc aggcgaccct ggctcgtgcc cgggtgaccg aagccggatt
      661 ggatgatcgg gtgagcattc gggtgctgga ctatcgcgat cttcgaggcg agcgcttcga
      721 tgccatcgcc agtatcggga tggtggagca cgtaggagcc gagcggatcg atctatacgc
      781 tgcccgtctt gccagtctgc tacggcccgg cggccggctg ctcaaccatg gcgtcgccca
      841 tctgcaccag tcggtcgcca agcccgggcc atttaccgac cggtatgtgt tccccgattc
      901 gaatccgctg catctgtcac ggatcctcct cgccctggag aaggccggct tcgtgaccga
      961 acacgtcgag gagttcggtg cggactacgc cgagaccctg cgacactggg cgaaacggct
     1021 cgatgagcat cgagaggagg cggtacggct ggccggggaa gagcgggtgc gggtctggcg
     1081 gctgtttctg cgaagcgcgc ggagcgcgtt cctgaccggg tacgactcga tttaccaggt
     1141 gcagagccgg ctggggccgt gaggaaggcg gtacggcggt acggcggtac ggcggtaagg
     1201 cggtaaggcg gtaaggcggt aaggcggtaa ggcggtaaga cggtaagacg gaacgtagtc
     1261 attgctactg gcgaccgagc ctgctctgag cccggtgaag cggagctccg atcgcaacca
     1321 ttggcagacg gtccatttcg gccaacgcag catccgcggt ccagcggacc gcgccaaatc
     1381 aagagcctgg cccgtaaggg ccgggcgcgc atcgagcacg ataaatcatg accggcccgg
     1441 catagccggg cgtatccgcc gtcgaatcag gtgcgggcgg gttcagccgg aggctttatc
     1501 acccccggct tccccgccac ccgccgcagc accccggtct gccccacgtg gtaacactca
     1561 tgaaatacga aggtggcgag gttgctcccg acggtctcgt tgggatcccc ggtgaatttg
     1621 cgtgggggct tcgaggccag tgtttcaggc gacatgcctt cgatagtcct gaccagaggc
     1681 tcctgcattg ccttgtagcg ccgcctcagc tcgtcgaagg agagcgcttt ctctcggctg
     1741 aacgggaccc cggttctgtc atcgtagggg tcgaactctt ccatcggata cggtgacggc
     1801 tggcccatgc tcccgagcgc catgttgcgg gtgcgggtca ggtgtcccag gacctggttg
     1861 aggcagcttc cgcccttcgg gggcgtgacc aggctctcct cgtgcgacac atctccggta
     1921 ttcatttcca ggatcttact ggagagctcg agctggtagg cgagggtctt ggcgtgcatc
     1981 gtcgcgtcct ccgcgtccgg agttatgcgg agggaagata atgggcggat cgccgatcag
     2041 ttcgacaagc gtgttgagtt tcggccccct ccccgctccc cttcgctccg ctcagggtcg
     2101 gggtcagggt gacaacctac cgccctgccg ccgtaccgcc gcagtatcta ccgcccgaat
     2161 agtcccgtgc ccgcgtgaag gctcactcga accccgagga ttcgcgaaga tacccggcac
     2221 tctggcgccg cagtccggac atgcgccacc ggtgccgatc cggtttcgca gaatgtggta
     2281 gcccagccgc tcaaccagca gcgcctgaca cgcggggcac caggtgtgct cccaccgtcc
     2341 cacccttccc ggcagattgc ccgcgtagac aaagttgagt ccctcttccg cgccgatctc
     2401 gcaggcgcgg atcaggacgt ccgccgtcgt gtttcccatg ccccagaact tgtagtcctc
     2461 gtggaacgcg gtcacgtgcc agggaatgtt gcggtcgatc cccgcgatgt accgcgctgc
     2521 ctcgcgcagc tcggctggat catcggagaa accgggtatc accagcgtga gcacttccaa
     2581 ccagatccca cgctcataga ccaggccgat cgcgtccagc acatgggcga gcaccccgcc
     2641 gagctggcgg tagtggcggt cattcatggt cttgaggtcg atcttgtagc agtcggtgcg
     2701 cggccggatg aagtccagcg cctcggccgt ggcgttgccg ttggagacga agccggtgag
     2761 aaatccacgg gaccgtgcgg gctggaagac ttccatcgcc cattccgccg tgatgagagg
     2821 ctcgttgtac gagctcacga tcagccgggc atcctgccgt tcggcgagag acacgagcgc
     2881 ctcggcggtg atgtcggtcg catcggtggt ggcgcgctcg tcccgcagcg actgggaggt
     2941 gagccagttc tggcagtagc cgcaatggaa gtcgcagccc agcatgccga aggtgagcgc
     3001 gtcggcgccg gggagcacgt ggaagaaagg cttcttctcg accggatcgc actggagcgc
     3061 ggcgacgtac ccgcgcggca ccagcagccg gccgccctgg ttgaaccgga cccggcagat
     3121 gccccgccgg ccttcgcgga tcagacaccg gtgcccgcag gccacacagc ggagcgcggc
     3181 atccgggaga ggctcccaga gtttcccttc ggtggtgcgg gtgtcgaggc ttgccccgag
     3241 cgtcgtcgag gcgtgcgcag ctagattgtc cggcatgtgg tttgaaaata atgaacgaac
     3301 gagggagccg ggcctctcgg ccggcgggac tggaccgagc ccctccggct tcgagcgccg
     3361 acctctcccc accacacccc ttgcgctcag ccttcgggac tcagcccagt cctgcccgcc
     3421 tctcat
//
LOCUS       DASYRV010000242         4230 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2333294, whole genome shotgun sequence.
ACCESSION   DASYRV010000242 DASYRV010000000
VERSION     DASYRV010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4230
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2333294"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            377..1888
                     /gene="dacB"
                     /locus_tag="VGQ24_06235"
     CDS             377..1888
                     /gene="dacB"
                     /locus_tag="VGQ24_06235"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HEV8454469.1"
                     /translation="MHLRLLPALLTVLLCGFSSAGILAAQQLTPGELARVDDWYRRTV
                     ARTGDGQWGIAIGTMDGRILWSLNPELELIPASTAKLFTTGFTRARAGGGARISTRVI
                     GRGRLDSASGRWQGSWQLELGGDPTLDRPGRGGPTLRELVRQLRAGGIRVLEGPLALT
                     SRTGPASSRYPTVWSPDFEGRLYAPPVGPVALHENTISLTFRPGADVGSPPSLVSAYP
                     AGIERLVRIHATTVGGSRRRLSLIADSDGGWTLIGSIGIGGRTAGLSAVAHDPSSVMA
                     YAWGAALDRAGIEWINRTSPPPSSPALPAVLAIVESAPFDSVAIEINRRSLNIGAELV
                     LQWAAASQTAGPALLTQHVRDVVGPRAQVQLVDGSGLSELDRVSPLTQMLYLARYPQR
                     RGAERFPLLLPANGIGTLRGLRRGMAPGVVHAKTGTLDRVAALAGYLGRTDGVLVISL
                     MYNGRRIGPARAAEWELFRLLGAEGVNLSGALETHMGGPSNVDEEPADSAAWR"
     gene            complement(1871..2050)
                     /locus_tag="VGQ24_06240"
     CDS             complement(1871..2050)
                     /locus_tag="VGQ24_06240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454470.1"
                     /translation="MRISEGKTASNELMMMLFSGDMDPQERSVIREGLLAYCKQDTWA
                     MVQLLRRLRELTPGG"
     gene            2503..2763
                     /locus_tag="VGQ24_06245"
     CDS             2503..2763
                     /locus_tag="VGQ24_06245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454471.1"
                     /translation="MDSTARQARLKPEFASLYPPLTPDVWEPAAEMGARVLLWQVQQQ
                     GTAALGTRLLDERHFEFRGGWRRGSETDLRTRVCDPAFNGPL"
     gene            complement(2807..4108)
                     /locus_tag="VGQ24_06250"
     CDS             complement(2807..4108)
                     /locus_tag="VGQ24_06250"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HEV8454472.1"
                     /translation="MGEWLGFGSDLPWWGWALLAIGVVAIVSVIGALFLPDWPNDDYT
                     VGFEADPGSESFVEWSAAFLNNPAFQGGEVTLLENGDAFFPAILNAIKQARDNINFEV
                     YIFEPDEIGRQFIDAFKERAAAGVEVRLLLDGFGAMKLRKRYRDELRQAGVRISRFRP
                     FSLRSLPRFYRRSHRRAIVIDGRVGFTGGAAVSAKWKGNVRNAHEWRDSMTRVTGPLV
                     SGIQSAFAGNWVYCTGEVIAGPRFFPRLDRGEGPCSLSVVSSPSDALQPIRLLLWLSF
                     INARRRLWICNSYFIPDRRLRVAVIERSRAGVDVRILVPGNHTDALPVQAAGRSYYEE
                     LLAAGIRIFEYQPAMMHAKTVVVDGAWSVVGSANLDERSMELNEENVLGIADRDFARA
                     VEEGVVADLERSREIHLDEWRKRPIYKKVLERAAKALIEQY"
BASE COUNT          730 a         1415 c         1338 g          747 t
ORIGIN      
        1 cgcacctcat ggccgcgctc gcgaagcgcg tgggcgatct ggtattccat ctcaggctcg
       61 tcggacttcc aggcgctcac ctcgcgctgc atctggcgct cgtggtctgg gtgatcccaa
      121 cccgagtaag gagtgtcaaa aacaacggcg acgcgcatgg cctaacaaaa tccctggccc
      181 cgcctcgtaa cgccaggcca cagcttgcgt tgcggggcct gagaccgcgc cgcgaaatgc
      241 ccgccagccg acaacctcaa aaggcgtaac tcctttcgca ccattcgact gggccatggc
      301 tcgacgattg ctcctgttta ccggggtgcc tttcctctat ttcgcgacac ataaccgaac
      361 agggacgagc cgccgcatgc acctccgtct gcttccggcg ttgcttacgg tcttactctg
      421 cggcttctcc tccgcgggca ttcttgcggc tcagcagctg acccctggtg agctcgcacg
      481 ggtggacgac tggtatcgcc gcacggtggc ccgcaccgga gacggccagt ggggcatcgc
      541 tataggcacc atggacgggc gaattctatg gagcctgaac ccggaactgg agcttatccc
      601 tgcctcgacg gccaagctat tcaccactgg cttcacccgg gcacgagcag gtggcggcgc
      661 acgcatttca accagggtca ttggcagggg gcggctggac tcggcaagcg gacggtggca
      721 ggggagctgg cagttggagc tcggcggcga cccgactctc gaccgcccgg gccggggcgg
      781 gcccaccctg cgcgagctcg tccggcagct tcgtgcgggc ggtattcgcg tgctcgaggg
      841 cccacttgcc ctgaccagcc gcacgggacc cgcctcgtca cgctacccga cagtgtggtc
      901 gcccgacttc gagggtcggc tttacgcccc gccggtgggg ccggtggcgc tgcatgaaaa
      961 caccatctca ttgaccttca gaccgggcgc ggatgtcggc tccccaccgt cactcgtgtc
     1021 cgcatacccg gccggaattg agcgcctggt ccggatccac gccacgaccg ttgggggaag
     1081 ccgccgcagg ctcagcctta tcgccgactc ggatgggggc tggaccctga tcggcagcat
     1141 aggtattggc ggccgcacgg ctggactctc ggcggtggca catgaccctt ccagcgttat
     1201 ggcgtatgcc tggggtgccg ccctcgaccg ggcgggaatc gagtggatca accggacttc
     1261 gccgccgcca tcctcgccgg cgcttccggc ggtgctggcc atcgtggagt ccgcgccatt
     1321 cgacagcgtc gccatcgaga tcaatcgccg cagcttgaat attggtgccg agctcgtgct
     1381 ccaatgggcg gcggcgagtc agaccgccgg tccagcgctc cttactcagc acgtacgcga
     1441 cgtcgtcggc cccagggctc aggtgcagct ggtggatggc agcggtctca gcgagctcga
     1501 ccgggttagc ccgctcaccc agatgctcta cctcgcgcgc tacccccagc ggcgcggcgc
     1561 cgagcggttt ccgctactcc taccggccaa tggaataggt acgctgcggg gactgcggcg
     1621 gggaatggca cctggcgtag tgcacgccaa gaccgggacg ctggaccggg tcgcggccct
     1681 cgcaggctac ctcggccgga ccgatggcgt gctggtcatc tcgctgatgt acaacgggcg
     1741 ccgcatcggc cccgcccgcg ccgccgagtg ggagctcttc cgcctgttgg gcgccgaagg
     1801 cgtcaatcta agcggtgctc tcgagaccca catgggtggt cccagcaacg tggatgagga
     1861 gccggccgac tcagccgcct ggcgttagtt cccgcagccg gcggagcaac tgtaccatgg
     1921 cccacgtgtc ctgtttgcag taggcgagca gtccctctcg gatcacgctc cgctcctgcg
     1981 gatccatatc gccactgaac aacatcatca tcagctcatt gctcgccgtc tttccttccg
     2041 aaatgcgcat gccctgatac tgccggcccg gtaccaaagc cggcagcacc tgcttcaggc
     2101 tgaagcttca accaaaggcg ggatggtaga cctgccccct gatgacttcc agcagatcca
     2161 ccagccgccg ctccatggct atgaggtcag cggccaattg ggggaagggc tgcggccaac
     2221 cgcctgatgc agtcaaacgc ggcgttgtag gccacgattg ttctggtatc tccacaggtc
     2281 tccaccaggt atcgggcgaa ttccggacgg ggatcgcccg gcccatcggc cagccactcg
     2341 acgtggcggc aggcgccgga ggcgggagca tcgcggcaat ctgtgtcccc tggcctaccg
     2401 cgacaagctc ggctgccctg gtgctcttga cgcgatgccc acattatgac tggctcgtga
     2461 cttgcggtgt acggtcgcct caaccgaccc tccggagatg gtatggattc aacggcccgg
     2521 caggcccgac taaagccaga gttcgccagt ctgtaccctc cgctcacgcc cgacgtgtgg
     2581 gagcccgctg ccgagatggg agcccgggtc ttgctctggc aggtccagca gcagggaacg
     2641 gcagctttgg gtacccggct cctagacgag cgtcacttcg agtttcgagg agggtggcgc
     2701 cgggggtccg agaccgacct caggacccgg gtgtgtgacc cggccttcaa cgggcccctt
     2761 tgaggagctg ggagctggga taaggctcct agctcctagc tcccagctaa tactgttcaa
     2821 tcagcgcctt ggccgcgcgc tcgaggactt tcttgtagat ggggcgcttg cgccattcgt
     2881 cgaggtgaat ctcccgcgag cgctccaggt cggccaccac tccctcctcc actgctcggg
     2941 caaaatcgcg atccgcaatc cccagcacgt tctcctcgtt cagctccatg ctgcgctcat
     3001 cgagattggc cgagcccacc accgaccagg ctccatcgac cacgacggtc ttggcgtgca
     3061 tcatggcagg ttggtactcg aagatccgga tacctgcggc gagcagctcc tcgtagtagc
     3121 tccgtccagc tgcctggacg gggagggcgt cggtgtgatt gcccggcacc aggatccgca
     3181 catcgacccc ggcgcgcgac cgttcgatca ccgcgacccg aagccggcgg tcgggtatga
     3241 agtaggagtt gcagatccag agtcggcggc gcgcgttgat gaagctgagc cagaggagga
     3301 gccggatggg ctggagcgcg tcggagggcg agctcaccac tgataaactg catggcccct
     3361 cgccgcggtc gagccgggga aagaagcgag gtccggcgat gacttcgccg gtacagtaga
     3421 cccagttccc cgcaaaggcc gactggattc cactcaccag cggaccggtg acgcgggtca
     3481 tgctatcgcg ccactcgtgg gcgttgcgga cattgccttt ccactttgcc gagaccgccg
     3541 caccaccggt aaaccccacc cggccatcga tgacaatggc ccgccggtgg ctccgccggt
     3601 agaaccgagg caggctgcgc aatgagaacg gccggaaccg gctgattctc accccggcct
     3661 ggcggagctc gtcgcgatag cgcttcctca gcttcatcgc accaaagcca tccagcagca
     3721 gccggacttc caccccggcc gctgcccgtt ccttgaatgc gtcgatgaac tgtcgcccga
     3781 tctcatcggg ctcgaagatg tatacctcga aattgatgtt gtcccgtgcc tgcttaatgg
     3841 cgttgagaat ggcggggaag aaggcatcgc cattttcgag gagggtcact tcaccgcctt
     3901 gaaaggccgg attattcagg aatgccgcgc tccattcgac gaagctttcc gagccaggat
     3961 cggcttcgaa gcccacggtg taatcgtcgt tgggccaatc ggggaggaag agggcgccga
     4021 tcaccgacac gatggcgacc actccaatgg ccaggagagc ccagccccac cagggcaggt
     4081 ccgacccgaa accgagccat tcgcccatcg agtctcaccg tttatgagga tgccaggtcg
     4141 attcgggcga gcagtggatg atggtctgag ccgaatacca gcgggccccg atcccgggga
     4201 tgctcatcga gccggtgcac ccgtgcgtgc
//
LOCUS       DASYRV010000243         2814 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_302750, whole genome shotgun sequence.
ACCESSION   DASYRV010000243 DASYRV010000000
VERSION     DASYRV010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2814
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_302750"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(116..478)
                     /locus_tag="VGQ24_06255"
     CDS             complement(116..478)
                     /locus_tag="VGQ24_06255"
                     /inference="COORDINATES: protein motif:HMM:NF012753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEV8454473.1"
                     /translation="MKLIVAIIRPDLLNEVLTALYRTDVRGLTVSRVLGHGGETEHVE
                     TYRGTTVKVDLQEKVRLEIGVSEPYVQVTINAILGSARTGEVGDGKIFVLDVAQVYRI
                     RTGERNEAAVTPAVATPA"
     gene            complement(492..1832)
                     /locus_tag="VGQ24_06260"
     CDS             complement(492..1832)
                     /locus_tag="VGQ24_06260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018284512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HEV8454474.1"
                     /translation="MTILPLLLAVQDAAAPPTIVPADTAWMLTSTALVLLMTPALAFF
                     YGGLVRNKNSLNTMMMSFVALGVVGVTWAIAAYSLAFSEGGPLLGSLTNFGLSGVGTE
                     AKGTIPHVLFMAYQATFAIITAALISGAVVERMRFGPYVAFIALWTLFVYAPVAHWVW
                     GGGWLMTRGALDFAGGTVVHINAGVSALVAALVLGSRKDYGRQAVLPHNVPFVLLGAG
                     LLWFGWFGFNGGSALAANELAGLAFTNTFLAPAATLVVWTLLDYFRTGKATAVGGATG
                     IVVGLVAITPAAGFVSPASALILGAVAALPSYFVISLRSRTRIDDSLDVFAGHGIGGL
                     TGALLTGVLAQKIWNSAGNDGLLYGNPHQLAIQALACLSAAAYAGIMTFVILKVLGLV
                     MSLRAVPRVEGVGMDVSQHGEEAYASGEGSVLVPPEAAVVPEPLPAFTPQVASR"
     gene            complement(1945..>2814)
                     /gene="glnA"
                     /locus_tag="VGQ24_06265"
     CDS             complement(1945..>2814)
                     /gene="glnA"
                     /locus_tag="VGQ24_06265"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEV8454475.1"
                     /translation="PPVDRLQDVRSKIMLALIEAGVPVEVQHHEVATAGQAEIDIRFG
                     SLVQTADRLLTYKYIVKNVCHNLGLTATFMPKPLFGDNGSGMHVHQSLWKGDKPLFFD
                     ENGYALISETARHYIGGLIAHAPALLGLCAPTTNSYRRLVPGFEAPVNLMYSARNRSA
                     ICRIPMYSSNPKAKRVEFRAPDPTANPYLAFAAMLMAGLDGIKRKLEPPAPIDEDLYE
                     IHDERKKLIKQVPGSLSEAIDALEKDQVFLLEGDVFTPDVLETWIALKRSKDIAPVNL
                     RPHPYEFFLYYDA"
BASE COUNT          506 a          924 c          913 g          471 t
ORIGIN      
        1 ggcccctact ccaccggttt cagatgcgtc cggagtaggt ccctcgcttt gctcgggatg
       61 aggagcgctc tttcctcccc tcgttctctc cttcccgtct ttcccgcctt tcccgctagg
      121 ccggcgtggc caccgccgga gtcacggcgg cttcgttccg ctcgccggtc cggatccggt
      181 agacctgggc gacgtcgagg acaaagatct tgccgtcgcc gacttcaccg gtgcgggcgc
      241 tgccgaggat cgcattgatg gtcacctgca cgtacggctc ggagacgccg atctccaggc
      301 gcaccttctc ctgcaggtcg accttgacgg tggtgccgcg gtaggtctcg acatgctcgg
      361 tctcgccacc gtgcccgagc acccgcgaga cggtgagacc gcggacatcg gtgcggtaga
      421 gcgccgtcag cacctcgttg agaaggtcgg ggcggatgat ggctacgatg agtttcatgg
      481 tatatgctct cctaccgcga cgcgacttgt ggagtgaacg cgggcagcgg ctcgggaacg
      541 accgccgcct cggggggcac caggaccgag ccttcgccgc tggcgtaggc ctcctcgcca
      601 tgctggctca cgtccatccc gacgccctcg acgcggggta ccgcgcggag cgacatcacc
      661 aggccgagca ccttgaggat cacgaacgtc atgataccgg cgtaggccgc ggcgctgaga
      721 caggcgagcg cctgaatggc gagctggtgg gggttgccgt acaacaggcc atcgttccct
      781 gccgagttcc agatcttctg cgccagcacg ccggtcagca gagcgccggt aagtccgcca
      841 attccgtggc cggcaaagac gtcgagcgag tcgtcgatcc gggtgcggga gcggagcgaa
      901 atgacaaagt agctcggcag cgctgccacc gcgccgagga tgagggcgct ggccgggctc
      961 acaaagcctg ccgccggagt aatggcgacc agcccgacca cgattccagt ggccccaccg
     1021 acggcagtgg ccttaccggt ccggaagtaa tccagcagcg tccagaccac cagcgtcgcc
     1081 gccggggcca ggaaggtgtt ggtgaacgcg aggccggcga gctcgttggc cgccagcgca
     1141 ctgcccccgt tgaaaccgaa ccagccgaac cagagcaatc ccgcgcccag caaaacgaag
     1201 ggcacgttgt gtggtagcac cgcttggcgc ccgtagtcct tccgggagcc gagcaccagc
     1261 gccgcgacca gcgcggacac accggcgttg atgtgcacca ccgttccgcc ggcgaagtcc
     1321 agcgcgccgc gggtcatgag ccacccgccg ccccagaccc agtgcgccac tggggcgtag
     1381 acgaacaggg tccagagcgc aatgaaggcg acatagggac cgaatcgcat gcgctcaaca
     1441 accgcgcccg agatgagcgc cgcggtgatg atggcgaagg tggcctggta ggccatgaag
     1501 agcacgtgcg ggatagtgcc cttggcctcg gtgcctactc cactcagacc gaaattagtc
     1561 aagctgccga gcagcgggcc gccctcgctg aaggccaggc tgtacgccgc gatggcccag
     1621 gtaaccccga cgacacccaa cgccacgaag ctcatcatca tggtgttgag cgagttcttg
     1681 ttccgcacca ggccaccata gaagaaggcg agcgcggggg tcatgagcag gaccagcgcg
     1741 gtcgaggtca gcatccaggc cgtgtcggcc ggaacgatgg tcggcggagc tgctgcgtcc
     1801 tgtacggcca gcagcaaggg taagatcgtc acggcgttgc tcccaggtag gggtctaggg
     1861 tctagggtct aaggtcaacg tctgactcac tgatctcgaa ctcgaggact ctagactcct
     1921 gaccctagac cctcgacctc tccatcacgc gtcgtaatac agaaagaact cgtacgggtg
     1981 cggccttaga ttgaccggcg cgatgtcctt cgagcgcttc agggcgatcc aggtctccag
     2041 cacgtcgggg gtgaacacgt cgccctcgag caggaagacc tggtccttct ccagcgcatc
     2101 gatcgcttcg cttaggctgc cgggcacctg cttgatcagc ttcttccgct cgtcgtggat
     2161 ctcatagaga tcctcgtcga tcggcgcggg cggctccagc ttgcgcttga tcccgtccag
     2221 gccggccatg agcatcgccg caaacgcgag atacggattg gccgtcggat ccggggccct
     2281 gaactccacc cgcttggcct tggggttgct ggagtacatc ggaatccggc agatggccga
     2341 acgattccgg gccgagtaca tcaggttgac cggagcctca aagccaggca ccaaccgccg
     2401 gtagctgttg gtggtcggcg cgcacaggcc gagcagcgca ggcgcgtgcg cgatcaggcc
     2461 gccgatgtag tgccgggcgg tctccgagat aagcgcgtag ccgttctcgt cgaagaaaag
     2521 cggcttgtct cccttccaga gtgactggtg cacgtgcatc cccgagccat tgtcgccgaa
     2581 gagcggcttg ggcatgaacg tggccgtgag tcccaggtta tggcacacgt tcttgacgat
     2641 gtacttgtag gtcaggagcc ggtccgcggt ctgcaccagc gagccgaatc ggatgtcaat
     2701 ctcggcctga ccagccgtcg ccacctcgtg gtgctgcacc tccaccggca caccggcctc
     2761 gatcagggcc agcatgatct tggaccgcac gtcctgcagc cggtccaccg gcgg
//
LOCUS       DASYRV010000244         6020 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_4036802, whole genome shotgun sequence.
ACCESSION   DASYRV010000244 DASYRV010000000
VERSION     DASYRV010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6020
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4036802"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(170..691)
                     /locus_tag="VGQ24_06270"
     CDS             complement(170..691)
                     /locus_tag="VGQ24_06270"
                     /inference="COORDINATES: protein motif:HMM:NF024076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3788 family protein"
                     /protein_id="HEV8454476.1"
                     /translation="MGRSSAYWSSNLYTVETEEPSPTAPLTDLPAPLASRFRALRTGL
                     LAIEEVAEQVRFMGPMWRWAWEYGMGNRKLCWLHLMRDSVDVTFTLTESDQSRLAKGP
                     KLAKALARAIEEGQRTGPVKWCWLELEDRRAVDAFLTLARRKAAWLSERPAPRRAPRL
                     HGGSSGSSEAEAD"
     gene            complement(691..1527)
                     /locus_tag="VGQ24_06275"
     CDS             complement(691..1527)
                     /locus_tag="VGQ24_06275"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HEV8454477.1"
                     /translation="MSEAGRGSGAAGQQEHTSEEPSPESVRPAAPPPRGPILVLVNPQ
                     DIVNIASAVRVAKNFGIERMRLVNPEVFDPYRIEGIAHNTADLVARIEILDSLEAALA
                     DCVFTAVLTARERAAKRRMLRPREAAAALVGEAAAGPVAIVAGREDSGLTNAELDLCH
                     ALVTISTDPGHRSLNLAQSVAIMAYEIWNARGGEVLPVKPPRNRADPVTAGQLEELFA
                     DWTRALWAIDFFKTRRSESVMRSFREIVFRADLDGREASLVRAMGIEVVRYLERHPSR
                     GS"
     gene            complement(1524..2987)
                     /locus_tag="VGQ24_06280"
     CDS             complement(1524..2987)
                     /locus_tag="VGQ24_06280"
                     /inference="COORDINATES: protein motif:HMM:TIGR01420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HEV8454478.1"
                     /translation="MARLDKLIQVMHEQRADALQLAVGKPAALMQNGTVRPITREPLT
                     DSQIQGLLREIASTETASQLGTAEPLAFVYRSPSGEVQVERKSGPNGAATLRLVTPAA
                     PSPPSAPSAPAPGARSMQDTAELRRAMDALFKVMVDSGASDLHLRSGVPPMLRLHGEL
                     ARQDQPAIPPERLEAMLVSIMTPKELGEFRETGDTDWAYEVEGLARFRCNAGRDRHGS
                     IAVFRVIPATVRTADEMGLSREVQNLCYLTKGLVVVTGPTGSGKSTTLASLVDLINRT
                     RSDHIITIEDPIEFVHASKKCLVTQRQVGVHTRSFKHALRAALREDPDIILVGEMRDL
                     ETVSIAIETAETGHLVFGTLHTTTAASTVDRIIDQFPPDRQSQVRVMLSESLRGVIAQ
                     TLCKKIGGGRVAAREILLTIPAVSNLIREGKTFQIPSIMQTNRKTGMVTLNDALVELV
                     DAKLVEPKEAYMKSVEKSGMLAALKAKRHDVSFLGEG"
     gene            complement(2996..3457)
                     /locus_tag="VGQ24_06285"
     CDS             complement(2996..3457)
                     /locus_tag="VGQ24_06285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454479.1"
                     /translation="MNDWGPTQRVPAEVVLAKGGVLVGDLHLLARTAYPLDPESPLEM
                     LNRTEPFFALTLAEGGAVFVSKIQVSILSCWGQSPLRDPDRASAAKLVALEVELADGT
                     KYQGRSTFELPPSRSRALDYVNGPGQFFVLWTDDLTRYVNKSLVRLIRPLD"
     gene            complement(3526..4413)
                     /locus_tag="VGQ24_06290"
     CDS             complement(3526..4413)
                     /locus_tag="VGQ24_06290"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEV8454480.1"
                     /translation="MAVAFLGLGAIGTPMAAHLAKRGPLVVWNRTPARSSEFASTHRA
                     RVARTPWEAAAGADVVVTCLPTSREVEALLEGPEGLLLGFRAGALFLDCTSGDPATSR
                     RIAAGLARRGIAFADAPVSGGVSGAVAGTLTVMVGGEPDTFRRALPVLQSFGKRIEHV
                     GPVGAGHAVKAVNNALLAVNLLAVGQGLAALVKAGVPARGAVDVFNASSGRSFVTEVL
                     VPERVLNGSWPRTFRLALLDKDVGIACAFAREAGVDASVLDLAGTLLSSARAALGEEA
                     DHVEAIRLIEQEAGVEIRG"
     gene            4526..5308
                     /locus_tag="VGQ24_06295"
     CDS             4526..5308
                     /locus_tag="VGQ24_06295"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8454481.1"
                     /translation="MLRRSLWSRVVLAALGACLVLFVVGPLLRLLWESSPSSLMDALR
                     DQELRASIALTVFTATMATVLAALFGIPLAYLLARRPFPGRRIVQGLVDLPVVIPHPV
                     AGIALLLFLGRRSPVGGTLAQLGLEFVSHVPGIIAAMLFVSAPILVSGAREAFQGVDP
                     QLERVARTLGDTGWSAFRRVTLPLAARGILAGSILAWARSVSEFGSIVILTYNPKVAS
                     IYIFDRFTAFGLKAAVPAAVILLLVAMTVFVVIRVLQPGERR"
     gene            5305..>6020
                     /locus_tag="VGQ24_06300"
     CDS             5305..>6020
                     /locus_tag="VGQ24_06300"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEV8454482.1"
                     /translation="MIRLEKLHVRVGSFDLRDITLEVPKGGYALIIGPTGSGKTTLLE
                     AVAGHARLRSGRIFMHDDDVTDLPPERRGLGFVYQQYHLFPHLSVRDNIGYGIARNGV
                     SSQGRVQELAQMLTIEPLLDRPVRGLSGGEQQRVALARALAPKPSILLLDEPFAAVDP
                     ATRHVLRRELQELHEREGITTLQVTHDFDEALRLGDLVAVLSEGRIAQSGTPEQVFRY
                     PNSAFVARFVGTGNVIAGTV"
BASE COUNT          983 a         2048 c         1951 g         1038 t
ORIGIN      
        1 aggcagcgac gcctccggcc gcaacgccac cgacgacgaa tgccaactta cggatcatca
       61 tctcaccgat gaggaagaac cctaaacaca cgccctcggc caacgcgcgc cgaagtatag
      121 tttggacagt ggattacaca acccgattcg gtttcatatt ccgacctttt cagtcggctt
      181 cagcttctga actgccggag cttcctccgt gaagccgggg cgcgcgccgg ggagcaggcc
      241 gttccgagag ccatgccgcc ttccgccggg ccagggtcag gaaggcatcc accgcccgcc
      301 ggtcttccag ctccagccag caccacttga ccggaccggt gcgctggcct tcctcgatcg
      361 cccgcgccag cgccttggcc agcttgggcc ccttggccag gcggctttga tcactctcgg
      421 tgagcgtgaa ggtgacatcg acgctgtctc gcatgaggtg tagccagcac agcttcctgt
      481 tgcccatgcc gtattcccag gcccatcgcc acatcggccc catgaaacgg acctgttccg
      541 cgacctcctc gatggcgagc aggccggtgc gcagggcacg gaaccgggag gccaggggcg
      601 cagggaggtc ggtcagcgga gccgtcggcg agggctcctc ggtttccacg gtgtagagat
      661 tcgagctcca gtacgcgctc gaccgtccca tcaggatccc cttgacggat gccgctcgag
      721 gtagcggacc acctcgatgc ccatcgcacg caccagcgag gcctccctgc cgtcgaggtc
      781 ggcgcgaaac acgatctcac ggaacgaacg catgacactc tccgaacgcc gcgtcttgaa
      841 gaagtcgatg gcccagagtg cccgagtcca gtcggcgaag agttcctcca gctgaccggc
      901 ggtgaccgga tccgcccggt tgcgcggtgg cttcaccgga aggacttcgc cgccccgggc
      961 attccaaatc tcatacgcca tgatcgcgac cgactgggcc aagttgagcg accgatgccc
     1021 cgggtccgtc gagatcgtca ccagcgcatg gcagagatcc agctcggcgt tggtgagccc
     1081 gctgtcctcc ctcccggcaa cgatggcgac cgggccggca gctgcctccc ctaccagggc
     1141 ggcggcggcc tcgcggggac gcagcatccg ccgcttggcg gcgcgctcgc gggcggtcag
     1201 taccgcggtg aacacgcagt cggccagggc ggcctcgagc gaatcgagga tctcgatccg
     1261 ggcaacgagg tccgcggtgt tgtgcgcgat gccttcaatg cggtaggggt cgaagacctc
     1321 cggattcacg agccgcatcc gctcgatacc gaagttcttc gcgacccgaa ccgcgctggc
     1381 gatattgacg atgtcctggg ggttcaccag aaccaagatg gggccgcggg gcggcggggc
     1441 ggcggggcgg acgctttccg gagaaggttc ctcgctggtg tgctcttgct gccctgctgc
     1501 cccgctgccc cgccccgcct cgctcatcct tctcccagaa acgacacgtc gtgacgcttg
     1561 gccttgaggg cggccagcat tccggacttc tcgaccgact tcatgtacgc ttctttgggc
     1621 tcgaccagct tcgcgtccac cagctccacc agagcatcgt tcagcgtgac catcccggtc
     1681 ttccggttgg tttgcatgat cgagggaatc tggaaggtct tgccctcccg gatgaggttc
     1741 gacaccgccg ggatggtcag caggatctcc cgggccgcca cccgtccccc gccgatcttc
     1801 ttgcagagtg tctgggcgat gaccccgcgg agcgactccg aaagcatcac ccgtacctgg
     1861 gactgccggt cgggcgggaa ctggtcgatg atccggtcga cggtagaggc ggcggtggtg
     1921 gtgtgcaagg tcccgaagac gaggtgtccc gtctcggcgg tctcgatggc gatggacacc
     1981 gtttcgaggt cgcgcatttc gccgacgaga atgatgtccg ggtcctcccg cagcgccgca
     2041 cgcaatgcgt gcttaaagga tcgggtgtgc acgccgacct ggcgttgcgt caccaggcac
     2101 tttttgctgg catggacgaa ctcgattggg tcttcgatgg tgatgatgtg atcgctgcgg
     2161 gtccggttga tcaggtcgac cagactcgcg agggttgtac tcttccccga tccggttggc
     2221 ccggtgacga ccaccaatcc tttcgtcaga taacacaggt tctgcacctc acggctcagc
     2281 cccatctcgt cggccgtccg caccgtcgcc ggaatgacgc ggaagacggc aatcgaaccg
     2341 tgacggtcac gacccgcgtt acagcggaac cgggccaggc cctcgacctc gtaggcccag
     2401 tccgtgtccc cggtctcgcg gaactcgccg agctctttgg gagtcatgat gctgaccagc
     2461 atggcttcga gtcgctcggg cgggatcgcc ggctggtcct gccgtgccag ctcgccatgc
     2521 agacggagca tcggcggtac ccccgaccga aggtgcaggt cggacgcacc cgaatccacc
     2581 atgaccttga acagcgcgtc catggctcgg cgaagctcag cggtatcctg catcgagcgc
     2641 gcgccgggag ccggcgcaga gggggccgat ggcggagatg gtgcggccgg cgtgaccaga
     2701 cggagagtcg cagcaccgtt agggccggat ttgcgctcca cctggacctc tcccgagggt
     2761 gatcggtata cgaatgccag cggctccgca gtaccgagct gggaggccgt ctcggtcgac
     2821 gcaatttccc ggagcagccc ctggatctgg ctgtcggtca acggctcgcg cgtaatcggc
     2881 cgcaccgtgc cgttctgcat cagcgcggcc ggcttcccga ccgcgagttg cagggcatcg
     2941 gcgcgctgct cgtgcatcac ttgtatgagt ttgtccagtc gtgccacgtt cggtctcagt
     3001 cgagagggcg aatcaggcgg accagcgact tgttgacata cctggtgaga tcgtcggtcc
     3061 agagtacaaa gaactggccg gggccgttga cgtagtccag agcccgggag cgtgacggcg
     3121 gtagctcgaa ggtggagcga ccctgatact tcgtgccgtc ggccagctcc acctcgaggg
     3181 cgacgagctt ggcggcagag gcccggtccg ggtcgcggag cgggctctgg ccccagcagg
     3241 agagtatcga cacctggatc ttggagacga acaccgctcc gccttccgcc agcgtgagcg
     3301 cgaagaacgg ctcggtacgg ttcagcatct cgagaggact ctcggggtcc aaaggatagg
     3361 cggtgcgcgc caggaggtgc agatcaccca ccagcactcc tcccttggcg agcacgacct
     3421 cggccggcac ccgctgggtg gggccccaat cgttcatcga gatcttgcag acatgggccc
     3481 gaaactgaac gacctccccc ggcgacggca agtgccggcg ggcgatcaac cccgaatttc
     3541 tacgccggcc tcctgttcga tcagcctgat ggcctcgacg tgatcggcct cttctcccaa
     3601 tgccgccctg gccgatgaga gcagcgtgcc ggccagatcg agcacggacg cgtccactcc
     3661 ggcttcacgg gcgaaggcgc atgcgattcc cacgtccttg tccaggagcg ccagccggaa
     3721 ggtccggggc caggacccat tgagcacgcg ctcgggcacc agcacctcgg tcacgaagga
     3781 acgcccactg gatgcgttga acacgtcgac tgcgccccga gccggaactc cggctttcac
     3841 cagcgccgcg agtccctggc caaccgccag caggttgacc gcaagcaacg cattgttcac
     3901 cgccttcacc gcgtgaccgg cgccgacagg accgacatgc tcgatacgct tcccgaacga
     3961 ttgcagcacc ggcagcgcac gccggaaggt gtctggctct cccccaacca tgaccgtgag
     4021 cgtgccggcc acggccccgc tcacgccacc gctcaccggc gcatcggcga acgcgatgcc
     4081 ccggcgggcc aggcccgccg caatcctgcg cgatgtggct ggatctcccg aggtgcagtc
     4141 cagaaacagc gccccggcac ggaaacccag gagaaggccc tcgggtccct cgagcagcgc
     4201 ctcgacctcg cgggaggttg gaaggcaggt gaccacgacg tcggcacctg ccgccgcctc
     4261 ccacggcgtc cgggcaacac gcgcgcggtg ggtggaggcg aactcgcttg accgggccgg
     4321 tgttcgattc cagaccacga gcgggccgcg cttcgccaga tgcgccgcca tgggcgtacc
     4381 aatggcgccg agaccgagaa atgccacggc catgtgaccg gaaacctttc gacccggagg
     4441 ttgggtgacc cagggacaag ttagcgatgg cggcgaggca cgggccagcc ctcgacaaac
     4501 cgtttcgcgc gagccacgat tcgccatgct gagacgctcc ctctggtccc gcgtggtgct
     4561 cgccgcactc ggcgcgtgcc tggtgctgtt cgtcgttggc ccgctgctcc ggcttctctg
     4621 ggagtcatcg ccgtcgagcc taatggacgc gcttcgggat caggagctgc gcgcctcaat
     4681 tgctcttacc gtcttcaccg ccacgatggc cacggtgctg gccgcactct tcggtatccc
     4741 cctggcctac ctgctggcgc ggcggccatt tccgggtcgg cgcatcgtac aggggctggt
     4801 ggatcttccc gtcgtcattc cccaccccgt cgcgggtatc gcgctcctcc tctttctggg
     4861 ccggcggtcg ccggtcggcg gcacactcgc gcagctcggg ctggagttcg tgagccacgt
     4921 gcctggcatc atcgcggcca tgttgttcgt ctcggcgcca atcctggtca gcggcgcgcg
     4981 cgaggcattc cagggtgttg acccccagct cgagcgggtc gctcgcaccc tgggcgacac
     5041 cggctggtcg gccttccgcc gggtaaccct tcccctggcc gcgcgcggga tcctggccgg
     5101 ctcgattctc gcctgggcgc gaagtgtgag cgaattcggc tcgattgtga tcctcaccta
     5161 caatcccaag gtcgcgagca tctacatctt cgaccggttc accgccttcg gcctcaaggc
     5221 agcggttccg gcagcggtca ttctcctgct ggtggccatg acggtcttcg tcgtgatccg
     5281 cgtgcttcag cccggggagc gcagatgatc cggctggaga agctgcacgt ccgggtgggc
     5341 tcgttcgacc tccgcgatat cacgctggag gtgccgaagg gcggctatgc gctcatcatc
     5401 ggtcccaccg gttcgggtaa gaccaccttg ttggaggcgg tggccggaca cgcccgtctc
     5461 cgctcgggac ggatcttcat gcacgacgac gatgtcaccg atctgccgcc ggagcgccgc
     5521 ggattgggat tcgtctacca gcagtaccac ttgtttcccc acctgagcgt gcgcgacaac
     5581 atcgggtacg ggatcgcccg gaacggcgta agctcgcagg ggcgggtgca agagctggcc
     5641 cagatgctca cgatcgagcc gctgctcgac cggccggtac gtgggctcag tggcggagag
     5701 caacagcggg tggccctggc ccgagcgctg gcgcccaagc cgtccatcct gctcctggat
     5761 gagccgtttg ccgcggtcga tccggctacc cgccacgtgc tccggcgcga gctccaggag
     5821 ctgcatgagc gagagggaat caccacgctg caggtcaccc atgatttcga cgaggcgttg
     5881 cgcctgggcg atctggttgc cgtgctctcc gaggggcgca tagcgcagag cggcaccccc
     5941 gaacaggtct tccgctatcc caactcggca ttcgtggcac gttttgtcgg aaccggcaac
     6001 gtcatcgccg gcacggtcga
//
LOCUS       DASYRV010000245        12145 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_674137, whole genome shotgun sequence.
ACCESSION   DASYRV010000245 DASYRV010000000
VERSION     DASYRV010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12145
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_674137"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..246
                     /locus_tag="VGQ24_06305"
     CDS             <1..246
                     /locus_tag="VGQ24_06305"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEV8454483.1"
                     /translation="EPERLFSWRWQPGGDPDIDPAEPTTLVVFELEEIPEGTRLTVTE
                     SGFDRIPPARRSKAYRENEQGWTEQLENIRKYLARTK"
     gene            230..571
                     /locus_tag="VGQ24_06310"
     CDS             230..571
                     /locus_tag="VGQ24_06310"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEV8454484.1"
                     /translation="MPARSRSRTPAPVFAALGDETRLRLLARLGSGEPMSISRLTAGS
                     GITRQGVTKHLRVLAGAGLVRASRRGKESLWRLERNRLEEARRSLDLISRQWDVSLGK
                     LKMFVEDDRPS"
     gene            733..1455
                     /locus_tag="VGQ24_06315"
     CDS             733..1455
                     /locus_tag="VGQ24_06315"
                     /inference="COORDINATES: protein motif:HMM:NF017771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEV8454485.1"
                     /translation="MTTLKIADPVVVSRAEWLEARKKLLIKEKSYSRQGDALAAERRD
                     LPWVRVDKDYVFDAPGGKESLADLFEGRSQLIVQHFMFGPGWKEGCPSCSFMADHVGG
                     ALVHLAHRDVTFVAVSRASLSEIEPFKTRMGWGFKWVSSAGSDFNFDYGVSFTQEELA
                     QEKVSYNYGLAVFTGGEAPGISAFYRDEDGQVFHTYSTYARGCETMMGTYRLLDLVPK
                     GRDEAGLPYTMAWLRHHDRYGE"
     gene            complement(1457..2056)
                     /locus_tag="VGQ24_06320"
     CDS             complement(1457..2056)
                     /locus_tag="VGQ24_06320"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEV8454486.1"
                     /translation="MTPRPYRMERRRESTGANRQRIIDAARELLASQKSSTRFSVEEV
                     ARRAGVARMTVYHQFGSLGGLLEGLCDSLAIAGGMHHLADAFREPDALKALDRFIAVF
                     IGFWESDRPVIRSLGALAALDPEFASVLEERYGWRRKGVRALLDQLAKQTGRPKRNDA
                     ADLLYMLTSFSTYDTLATSKRSTGQVTKLVQRLARAVLS"
     gene            2150..2665
                     /locus_tag="VGQ24_06325"
     CDS             2150..2665
                     /locus_tag="VGQ24_06325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454487.1"
                     /translation="MDERTLTIVLRLIHILGGIFWAGTMIMLAAFLLPTARATGPEGG
                     RFMQYLMRQRRLQLYLGTAMLLTVLSGIAMYARMAAATHGAWASSRPGIAYGVGAVAA
                     ILAAAIGGSIGSSAGRKMLAVGQTIGPSGPSAQQQAELGRLQSRMALGARLAAGLLVV
                     SAGAMAVGRYL"
     gene            2743..3540
                     /locus_tag="VGQ24_06330"
     CDS             2743..3540
                     /locus_tag="VGQ24_06330"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEV8454488.1"
                     /translation="MRHQVVAPKGDGVYPDLGGKVVLVTGSSRGIGAAIARCFAEQGA
                     KVAVHGRDPAALSAVRDEIEWAGGRAMQVTADVTRFAEIEAMRGEIEGELGPIDVLVA
                     NAGGSFTRPGPLEETAEEGWRASVDGNLTATFLTIKSILPGMKQRKSGNIITISSAAA
                     RRPHPMSPIPYAAAKAGIQMLTQHLAAQVGPFGIRVNCVAPETILTERNQQRIPEAQI
                     QPLIEQHPIRRLGTPEDVARAALFLASEESAWITGIVLDVTGGAVMV"
     gene            complement(3656..5080)
                     /locus_tag="VGQ24_06335"
     CDS             complement(3656..5080)
                     /locus_tag="VGQ24_06335"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEV8454489.1"
                     /translation="MRPIALALTFATLLTRTLPAQRPDSLSEEVRKYVAVDTTVVALT
                     HVLLLDGTTADPKPDQTIVIRDGRIASVGPAAEVRIPEGVRTMDLNGHTVIPGLIGMH
                     DHLFYTAAGGRAVQMSYTGPRLYLASGVTTIRTAGGRSPYAEINLRDNISRGRVPGPR
                     IHLTAPYITGEAGGGSMDVVTSPEEARRFVAYWASEGATWIKAYTDIGRAELGAAIKE
                     AHRRGVKVTGHLCSVSFREAVALGIDNLEHGMLTASDFDPAKQPDVCPVATIGRNNES
                     DARSAVAQDVIRAMVKRGVSMTSTLAVYEPFVANRPTKEPRVLKAMAPEVRESYLKIR
                     NEIDSTGTGPIAAEGFKSAMAFEKAFVEGGGNLGAGVDPTGLGGALAGYGDQRNYELF
                     IEAGFTPTQAIRIMTFNGAKILGVQQRLGSVERGKLADLVVLNGDLIRDPKVIRNPTV
                     VFKDGIGYDSAKLIGSVEGRVGID"
     gene            complement(5148..7292)
                     /locus_tag="VGQ24_06340"
     CDS             complement(5148..7292)
                     /locus_tag="VGQ24_06340"
                     /inference="COORDINATES: protein motif:HMM:NF019352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase family protein"
                     /protein_id="HEV8454490.1"
                     /translation="MFSLAFVFALGLQSAVAQQRPCDDPSPFGPSRDLYCIELVPAPG
                     ITGVSGRVELGHIPGPFTVVVGPDGRPRYQLILSAAGLPPPASLGSYRTYVAWVAPPT
                     MDSIVSLGAIRNGRTRLSIVDLEKFTVLVTAERSARAKEPSRRLLLRGQSPGTRLYPP
                     DLLQFSIGSMSPPVGKERHDHDATGAGMPASDSVLRWTTVPMPPGLTMLPAEMALRPG
                     EAAWLPSSQQPAPPVRPRELLRLDDGDTLRLEAGLVSRSLNGRSYTMFAFNGQQPGPL
                     IEVVRGSRLTVVLTNRLSQPTTVHWHGIRLDNPNDGTPDMTQPAVPPGGEFIYRLRFP
                     DTGIYWYHPHVREDIQQELGLYGNLLVRGPEGDGYGPANREAVLMLDDLLVSDAGMVP
                     LGQDSPTHALMGRFGNILLVNGEPGYRLSVKRGEVVRFFLTNAANARTLNLSFPGARM
                     KVLASDVGTYEREEWVENVVIAPAERYVVQVRFERAGTVALVNRVRGLDHLYGRFFAQ
                     SDTLGLVEVASERIGRDLGTSFAALRRDPTTTAELQHYRRAAERAPEKTLILTLETRG
                     LPPLTQRLMQLDSIYFAPVEWSGTMPMMNWASTGRQVRWILRDPETGKENMDIGWRFH
                     RGEPIKIRLVSERQSVHAMQHPIHLHGQRFLVLAVNGEPNQNLVWKDTVLVPAGGTVD
                     ILLDPSNPGRWMAHCHIAEHLSAGMMLGFTVE"
     gene            7514..8014
                     /locus_tag="VGQ24_06345"
     CDS             7514..8014
                     /locus_tag="VGQ24_06345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454491.1"
                     /translation="MSDIPQRLAAALAGRYVLEREIGAGGMATVYLARDLRHKRSVAV
                     KVVRPELGGPEGVERFLREIELAARLQHSHPGTRPHLRGGGAARLGGYGVPAVSQALG
                     QGGSEAAGEGDRSQGSSAGAQPRANRVILRFWAAEPIGVHSDQYRRLATGAAPDDKIA
                     GAGQRQ"
     gene            complement(8404..8793)
                     /locus_tag="VGQ24_06350"
     CDS             complement(8404..8793)
                     /locus_tag="VGQ24_06350"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEV8454492.1"
                     /translation="MDYLFLLGRILFGGFFLVNAFRHFTGVSAMAPYAASKGVPLPQL
                     AILASGVLLALGGLSILLGVRPKWGILFLAMFLIPVSFAMHNYWTDRDPQTRQANEIN
                     FHKNLALLGAALMLLAIPEPWLLSLGH"
     gene            complement(9105..9572)
                     /locus_tag="VGQ24_06355"
     CDS             complement(9105..9572)
                     /locus_tag="VGQ24_06355"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEV8454493.1"
                     /translation="MKARELMSAQPACCTPNDTVQEAARLMREYDCGCIPVVEDKESN
                     RLVGVITDRDIACRCTAEGKGPKTPVGEGMSRDPKSCGPDDDVEAVERIMADHQVRRV
                     PVMDDQGGCVGMIAQADLALNARAASDSEVGRVVERISEPGHSSGSTPAGRAS"
     gene            complement(9646..10146)
                     /locus_tag="VGQ24_06360"
     CDS             complement(9646..10146)
                     /locus_tag="VGQ24_06360"
                     /inference="COORDINATES: protein motif:HMM:NF040444.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6496 domain-containing protein"
                     /protein_id="HEV8454494.1"
                     /translation="MPEKETVERAHQDAREGKAPTTQAGEFVREEMHHIREGKHGARS
                     PQQAIAIGLSKARRAGVKLRPPKKGAASEKTRRSAERAYRKGQSATKKKPSAKRSRAI
                     KGALKREGRTAASRRALASQARSAARRRTASSRSAAAKKAARTKGRAGRSAAARKAAR
                     TRARRC"
     gene            complement(10399..10923)
                     /locus_tag="VGQ24_06365"
     CDS             complement(10399..10923)
                     /locus_tag="VGQ24_06365"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HEV8454495.1"
                     /translation="MTVSVFVGTSLDGFIARPNGDLDWLPAGGGEPHGYDEFIAGVDA
                     LVIGRKTFEKVLTFEAWPYGDKRVVVLSSRPVDLSAAHGGIVEHMAGPPAEIVSRLAA
                     RGVHHLYVDGGITIQRFLQAGLIQRLIITRVPVLIGDGIPLFGRLHRDVRLRHVATQQ
                     YPSGLVKSEYAVVA"
     gene            11114..12145
                     /locus_tag="VGQ24_06370"
     CDS             11114..12145
                     /locus_tag="VGQ24_06370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454496.1"
                     /translation="MAEPKTAKHVPSKSEGKPRRKKKAAAEPRSRGIAPDAIGSGTPP
                     AAVTRLAESIEADGGTVLAPYKDPLGGHWQIFAALPIDLVEPTPYQRDLSKPHVERLS
                     LAMEKLGRYLDPMIVVRGDQPDEEEPALNGAEEARPYWTPNGNHRLAALRELGARSVV
                     AIVVPDIEVAHRILLLNTEKAHNLRERSLEVIRLAQLLAQTEDRPERVFEIEFEEPAL
                     LTIGLCYQENGRFAGGAYHPVLRRAEKWLGSALPKALETRRERAGRVLELDEAVTEAM
                     KKLKARGFDSPYLRPFVVARINPLRFKRGAKAEFEQVVDQMLAAAQRFDAAKIKPDQV
                     ARAGGAPED"
BASE COUNT         2142 a         3913 c         4030 g         2060 t
ORIGIN      
        1 gagcccgagc ggctcttctc ctggcgctgg cagcctggcg gcgaccccga catcgacccg
       61 gccgagccca ccacgctggt cgtcttcgag ctggaagaga taccggaggg gactcggctt
      121 accgtgaccg agagcggatt cgatcgaatt ccgccggccc ggagatctaa ggcataccgg
      181 gagaacgaac agggctggac cgaacagctg gagaacatcc ggaagtacct tgcccgcacg
      241 aagtaggagc cggacgccgg cgccggtctt cgccgccctg ggcgacgaga cccggctccg
      301 gctcctggcc cggctcggca gcggggaacc gatgtcgatc tcgcggctca cggccggctc
      361 cggcatcacc cggcagggtg tcaccaagca tctcagggtg ctggcgggtg ccggcctggt
      421 acgcgcgagc cggcgaggga aggaaagtct ctggcggtta gagcgtaatc ggctggagga
      481 ggcgagacgt tcattggacc tgatctcacg ccagtgggac gtgtcgctcg gtaagctcaa
      541 gatgttcgtg gaggacgacc ggccgagctg accggcgcca ccgatgagag gagggccgat
      601 gtgcccagcc tgcgtgtcca ttggtgtgct ggcccttgtc ggtgcagtgt ctacggcagg
      661 gctgagcggg ctgatggccg gccgcgaaac gaagacgagt caatcgaacc ccacaccgga
      721 agagaagtca tcatgacaac gctgaagatt gcagatcccg tggtcgtgtc ccgggccgag
      781 tggctcgagg cgcgaaagaa gctgctgatc aaggagaaga gttatagccg ccagggcgac
      841 gcgctcgccg cagagcgtcg cgacctaccc tgggtgcgag ttgataagga ttacgtcttt
      901 gacgcgcccg gtggaaaaga gagcctggcc gacctgttcg aggggcgcag ccaactcatc
      961 gtgcagcact tcatgttcgg cccgggctgg aaggagggct gccccagttg ctcgttcatg
     1021 gccgaccacg tcggcggcgc cctggtgcat ctcgcccatc gggacgtgac gttcgtcgca
     1081 gtttcgcgcg cgtccctcag tgagatcgag cccttcaaga cgcgcatggg ctgggggttc
     1141 aagtgggtat cgtcagccgg cagtgacttc aacttcgact acggcgtgtc tttcacccag
     1201 gaagagctgg cgcaggaaaa ggtgtcctac aactatgggc tggcggtgtt cacgggaggg
     1261 gaggctccgg gcatcagcgc cttctatcga gacgaggacg gccaggtctt ccatacttat
     1321 tccacctacg cccgcggatg cgagactatg atgggcacct acaggctgct cgatcttgtg
     1381 ccgaagggcc gcgacgaggc cggtctccct tacaccatgg cctggctccg gcaccacgac
     1441 cgatacgggg agtgaatcaa gagagcaccg ctcgcgccag ccgctgcacc agctttgtta
     1501 cttgcccagt gctccgcttc gatgtggcca gggtgtcgta ggtggagaag ctggtcagca
     1561 tatagagcag gtcggccgca tcgttccgct tggggcggcc ggtctgcttg gccaactggt
     1621 cgagcagcgc tcgcactccc ttgcgcctcc agccgtaccg ctcctccagc acggaggcga
     1681 actccggatc cagcgccgcg agggcgccca ggcttcgtat gaccggccgg tctgactccc
     1741 agaacccgat gaacacggcg atgaatcggt cgagtgcctt cagcgcatca ggctcgcgaa
     1801 acgcatcggc gaggtgatgc atcccccccg ctatggcgag cgaatcgcag agtccctcca
     1861 gcagccctcc gagcgacccg aactgatggt aaaccgtcat ccgcgccacc ccggcgcggc
     1921 gggccacctc ttcgaccgag aatctggtcg aggacttttg ggaggcgagt aactcccggg
     1981 ccgcgtcgat gatgcgctgc cggttcgcgc cggtgctctc ccgccggcgc tccatccgat
     2041 acggccgtgg ggtcatggcc ctcttgacgc ctcacattca ttgtatacac tgtataacta
     2101 atatgtacag gctgtacagt caaattgcac caccggaggc aagatcataa tggatgaacg
     2161 aaccctcacc atcgtgctcc ggctgatcca catccttggc gggatcttct gggccggtac
     2221 catgatcatg ctggcggctt tcctgctgcc cactgcgcgg gcgacgggac cggaaggggg
     2281 caggttcatg caatacctca tgcggcaacg gcggctgcag ctctacctcg gcacggctat
     2341 gctgttgacc gtgttgtcgg gtatcgccat gtatgcccgc atggcggcgg cgacccacgg
     2401 ggcttgggcc agctcccgac cgggcattgc ctacggggtc ggtgcggttg cggccattct
     2461 ggctgcggcc atcgggggtt ccatcggcag ctcagcgggc cggaagatgc tggcagtcgg
     2521 ccagaccatt ggcccgagcg gaccctcagc ccaacagcag gcggaactgg gtcggctcca
     2581 gagccgaatg gccctcggcg cccgactcgc tgctggcttg ctggttgttt ccgccggagc
     2641 gatggcggtt gggcggtatc tctgatgata ggcggggagg cggggaagcg gggaagcgat
     2701 cggccgggca gcggggcatg tacctctgag gaaagcaggt ccatgcgcca ccaggtagtg
     2761 gctccaaaag gggacggcgt ctatcccgat ctcgggggga aagtggtcct ggtgaccggc
     2821 agctcgcgcg gcatcggggc cgccatcgcg aggtgcttcg ccgagcaagg ggctaaggtc
     2881 gcggtgcacg gcagggaccc agcggcgctg tcagcggtac gggacgagat cgagtgggcc
     2941 ggtgggcgcg cgatgcaggt gacggccgac gtcacccggt ttgccgagat cgaggccatg
     3001 cgcggtgaga tcgagggaga gctcggtccg atcgacgtgc tggtggcgaa tgcgggcggc
     3061 agcttcacca ggcccggccc gctggaggag acggctgagg aggggtggcg ggcgtcggtg
     3121 gacggcaacc tcacggcgac atttctgacc atcaagagca tcctgcccgg catgaagcaa
     3181 cgcaagtcgg gcaacatcat caccatatcg tcggccgcgg cccgaagacc ccatcccatg
     3241 tctccaatcc cgtacgccgc cgccaaggcc ggcatccaga tgctcaccca gcatctcgcg
     3301 gcgcaagtcg gtcccttcgg cattcgggtg aactgcgtcg ctcccgagac catcctcacc
     3361 gagcgcaacc agcagcggat tcccgaggcg cagattcagc cgctgatcga gcagcacccg
     3421 atccgccggc tgggcacgcc cgaggacgtg gcccgcgcgg cactgtttct cgcctcggag
     3481 gagtcggcgt ggattaccgg gatagtcctg gacgttaccg gcggggccgt gatggtatga
     3541 aggacgcagg cgtagtaatt cggcttttcc tgctcgcaga agcggccagc ttcattggta
     3601 tcctgctcgt tctcgtgtgg ggtctcagcg tcgcggcccg ggcccgcagc agtcgctagt
     3661 cgatacccac ccttccttcg accgacccga tcaacttggc ggagtcgtag ccaatcccat
     3721 ccttgaagac cacagtcgga ttccgaatga ccttgggatc gcggatgagg tctccgttga
     3781 gtacaaccag gtcggcgagc ttcccccgtt ccaccgagcc gagccgctgc tgcacgccga
     3841 ggatcttagc cccgttgaat gtcataatcc ggatcgcctg ggttggggtg aagccggcct
     3901 cgatgaagag ctcgtagttc cgctggtcgc cgtagccggc cagcgcgccg cccaggccgg
     3961 tggggtccac tcccgcgccc agatttccgc ctccctccac gaatgccttc tcgaaagcca
     4021 tggcgctctt gaacccctcc gccgcgatag gccccgtgcc ggtggaatca atctcgttcc
     4081 tgatcttgag gtagctctcc cggacttcgg gagccatcgc cttcaacacc cgtggctctt
     4141 tggtggggcg gttggccaca aagggctcgt acaccgccag cgtggacgtc atggatacgc
     4201 cccgcttgac catggcccgg atcacgtctt gggccactgc gctccgcgca tcgctctcgt
     4261 tgttgcgacc gatcgtggcc accggacaga cgtccggctg cttggcagga tcgaagtcgg
     4321 acgcggtgag catgccgtgc tcgagattgt cgattcccag cgccaccgcc tcccggaagg
     4381 agaccgaaca gaggtgaccc gtgactttga cgccgcgacg gtgcgcctct ttgatggcgg
     4441 cgcccagctc cgcgcggccg atgtcggtat acgccttgat ccaagtggcg ccctcgctgg
     4501 cccagtacgc gacgaaccgg cgggcctcct ccggcgaggt caccacatcc atgcttccgc
     4561 caccggcctc cccggtgata tagggcgcgg tcagatggat ccgcggtccc ggcacccgac
     4621 cgcggctgat gttgtcccgc aggttgatct cggcgtaggg ggagcggccc ccggcggtgc
     4681 ggatcgttgt cactcccgag gcgagataca gccgcgggcc ggtataagac atctggaccg
     4741 cccggccgcc ggcggcggtg tagaacagat gatcgtgcat ccctatcagc cccgggatga
     4801 cggtgtgacc gttgaggtcc atcgtgcgga ccccctcggg aatgcgcacc tctgccgcgg
     4861 gaccgactga ggcgatgcgc ccgtctcgga tgacgatcgt ctggtccggc ttcgggtccg
     4921 ccgtggtgcc atccagcagc agcacgtggg tcagcgcgac gacggtggtg tccaccgcga
     4981 cgtacttccg cacctcttcc gacagcgagt ctgggcgctg agccggcagc gtgcgggtga
     5041 gaagggtggc gaaagtgagt gcgagggcga tcgggcgcat cgcgactcct gtaaggctgt
     5101 agggatcctt cgctgcgctc aggatgacag cgtgctcagg atgcatgcta ttcgacagta
     5161 aatcccaaca tcatccccgc cgacagatgc tccgcgatgt ggcagtgcgc catccagcgg
     5221 ccgggattgg aggggtcgag cagaatatcc accgtgcctc ctgcgggcac caggacggtg
     5281 tccttccaga ccaggttctg gttgggctca ccgttcaccg ccagcaccag gaaccgctgc
     5341 ccgtgcagat ggatcgggtg ctgcatcgca tggacgctct gccgctcgct gaccagacga
     5401 atcttgatcg gctcgccccg gtgaaagcgc cagccgatgt ccatgttctc cttcccggtc
     5461 tcgggatcgc gcaggatcca gcgcacctgg cggccggtgg aggcccaatt catcataggc
     5521 atcgtcccac tccattccac cggagcgaag taaatcgagt cgagctgcat cagccgttgg
     5581 gtgagcggcg gcagtccgcg agtctcgagg gtgaggatca gtgttttctc gggcgcgcgc
     5641 tctgccgctc gacggtagtg ctggagctcc gcggtcgtgg tggggtcccg ccgaagtgcg
     5701 gcgaagctcg tccccaaatc gcgtccgatc cgctccgacg ccacctccac caggccgagt
     5761 gtgtcgctct gggcaaagaa gcggccgtac aggtgatcga gcccgcgcac ccggttcacc
     5821 agcgccaccg tgcccgcccg ctcgaaccgt acctgaacca cataccgctc ggcgggagcg
     5881 atcaccacgt tctccaccca ctcctcgcgc tcgtaagtac ccacgtcgga tgccaggacc
     5941 ttcattcgcg cgcccggaaa cgagaggttc agggtgcggg cattggctgc gttggtcagg
     6001 aagaaccgga ccacttcgcc ccgcttgacg ctgagccgat agcccggttc cccgttcacc
     6061 agcaagatgt tcccgaaccg gcccatcaat gcgtgcgtgg gcgagtcctg gccgagtggc
     6121 accatgccag catccgagac cagcaggtca tcgagcatca gcaccgcctc gcggtttgcc
     6181 ggaccgtacc cgtcgccctc agggccccgc accagcaggt tcccgtagag acccagctcc
     6241 tgctggatgt cctcgcgaac gtgggggtgg taccagtaaa tcccggtgtc ggggaagcgg
     6301 agccgataga taaactcgcc gccgggaggg accgcgggct gggtcatgtc gggggtgccg
     6361 tcgttcggat tgtctaaccg gatcccgtgc cagtgcaccg ttgtcggctg agacaggcgg
     6421 ttggtgagca cgaccgtgag ccgggagccg cggacaacct cgatcaaagg tcctggctgc
     6481 tgaccgttga acgcgaacat cgtgtagctc cgcccgttga gactccggct caccagcccg
     6541 gcttcgagcc gcagcgtgtc accatcgtcg aggcggagca gctcgcgtgg gcgtaccgga
     6601 ggcgcgggct gctgggatga cggcagccag gccgcctcgc cgggacgcag tgccatctcg
     6661 gcgggaagca tggtgaggcc gggcggcatc gggacggtag tccagcggag tacggagtcg
     6721 gaagccggca tgccggcgcc ggtggcgtcg tgatcgtggc gctccttgcc aaccggcggc
     6781 gacatcgagc cgatggagaa ctggagcaga tcgggcggat agagccgggt gcctggagac
     6841 tgaccgcgga gcagcagccg gcggctcggt tccttcgcgc gagcactccg ttcggctgtc
     6901 acgagcacgg tgaacttctc caggtccacg atgctcagcc tggtgcggcc gttccgaata
     6961 gcgccgaggc tcacgatcga gtccatggtc ggcggcgcaa cccaggcgac gtaggtgcgg
     7021 tagctcccga gcgatgcagg tggcggcagt cccgcggccg agaggatcag ctggtagcgg
     7081 ggccggccat cgggtccgac gactacggtg aaggggccag gaatgtggcc gagctcgact
     7141 cggcccgaga cgccggtgat gcccggcgcg gggacgagct cgatgcagta gagatcgcgg
     7201 ctgggcccga atggtgaagg gtcgtcacag ggacgctgct gggcaaccgc ggactgcagc
     7261 cccaacgcaa agacgaaagc gagtgaaaac atggggagga ctcgtttatc tcgccgtggg
     7321 cgcttcaaga attcttccag gagacccagc tcgtgcatca tcccggcggg gcctccgccg
     7381 gcgatgcagc agcgggtttg gattgagtcg tgttgttcca ttcaggatcc cagagactgg
     7441 tcaggttgga gatgcctctc attctacgcc gcaggggcgg ctttcgctaa gagagactta
     7501 aattctcagc tcgatgagcg acatcccgca gcgtctcgcg gccgccctgg ccggccggta
     7561 cgtcctcgag cgtgagatcg gcgccggggg catggcgacg gtctatctgg cgcgagacct
     7621 tcgccataag cgctcggtgg cggtgaaggt cgttcgcccc gagctcggcg ggcctgaggg
     7681 cgtcgagcgc tttctccggg agatcgagct cgccgcccgt ctccagcact cgcatcctgg
     7741 cactcgaccg cacctacgag gcggcggggc agcgcgactc ggcggctatg gcgtaccggc
     7801 ggtttctcag gctctgggac aaggcggatc cgaagctgca ggggagggtg acagaagcca
     7861 aggaagctct gcaggagctc agccgcgagc gaaccgagtg atcctcagat tttgggccgc
     7921 tgagccaatc ggcgttcata gtgaccagta tcgccgactc gccacgggtg cggctcccga
     7981 cgataagatc gccggagcag gccagcgcca atagccgccg caccgccagc ggtggcgagc
     8041 agcgcggctt ggaccccacc ggcctccgtg gcgagtccag ctccggcaag caggagactc
     8101 gcggcaaagg ctcccatgct tgcctcccag aggtggctac gtggcgcgcg acgccagccc
     8161 cgaacaactt cccaggccag aatgacagca ggtagagtta gccaccacgg gctggggtgg
     8221 tggcgcgcac cgatggctcc gatcaacaag gctgccatcg acgcagccat caggagggta
     8281 acaggacgtc ggagttggtc gagccaggcg cgatgcatat cccgggcgag caggagaatc
     8341 gcgctcagaa cgaggacaag ctcaaacacg gaccggagcg gcacgaaggc tccttagaaa
     8401 cgactagtgc cctagactca gtaaccaggg ttccggaatc gccaacagca tgagggcggc
     8461 tcccaggagt gcgagattct tgtggaagtt tatttcgttg gcctgccgcg tctgaggatc
     8521 ccggtcagtc cagtagttgt gcatggcgaa gctgacgggg atcagaaaca ttgccaggaa
     8581 caagatcccc cacttgggcc tcacccccag taagatgctc aagccgccaa gggcaagcag
     8641 gacgcccgag gctagtatgg ccaactgtgg taacggcacg cctttcgaag cggcgtatgg
     8701 cgccatagcc gacaccccgg tgaagtgacg gaaggcgttg accagaaaaa atccgccgaa
     8761 caagatccga cccagaagga acaggtagtc catatcacct ccagccgtag cactggacgc
     8821 tgatcagagg ttcagggacg tgaggggcac gacactctca aatggctcga aaacaacggt
     8881 gaagctctcc ggaggcgtga gccagcggcg cgcgaggagg ccgcgaacag gcgctcagat
     8941 agggatctcg gtcccgcgtc ggtggcactg ggggctccgc cttcgatcgg agtgtgccgg
     9001 taccgagatg taacccggca gcgacaagta ggaggcaggg cacgaacgag cggcagcaag
     9061 cggaacggcc ggccgcgagg agtggcgaga gacttaggca gcaactagct tgcgcggccc
     9121 gcgggcgtcg agccggacga gtgtcccggc tccgagatcc gctccaccac cctgccgacc
     9181 tcgctgtcgc tggcggcacg cgcattgagg gctaagtccg cctgcgcgat catccccacg
     9241 caacccccct ggtcgtccat caccggcact cgccggacct ggtggtcggc catgatcctc
     9301 tccactgcct cgacgtcgtc atcaggccca caagacttcg ggtcgcgtga catgccttct
     9361 cctaccgggg ttttcggtcc cttgccttcg gcggtgcaac ggcaggcgat gtcacggtcg
     9421 gtgatgacgc ccacgagtcg attgctctcc ttgtcctcga ctaccgggat gcacccgcag
     9481 tcgtattcgc gcatcagccg ggctgcctcc tgaacggtat cgttcggagt gcagcaggcg
     9541 ggctgtgcgc tcatcagttc acgagccttc attcgacctc ctcgtctgtg tcgggagcgg
     9601 gcatgttgct ccctcggttg gtgcgagcgg agccggtgtc gctgttcagc accgccgggc
     9661 tcgggtcctt gcggccttcc tcgctgcagc cgaccggccg gcacgaccct tggtgcgggc
     9721 ggccttcttg gcggctgccg accgactgct cgcggtgcgt cgccgagcgg cggaacgggc
     9781 ctgactagcg agtgcccggc gcgacgccgc ggtgcggccc tcgcgcttga gtgccccctt
     9841 gatggcgcgg gagcgcttcg ccgaaggctt cttcttggta gcgctctgcc cttttcggta
     9901 ggcgcgctca gcactccggc gcgtcttctc ggacgcagca cccttctttg gcgggcgcaa
     9961 cttcacccct gccctccggg ccttcgacaa tccaatcgcg atggcctgtt ggggagagcg
    10021 cgcaccgtgc ttcccttcgc ggatgtgatg catctcctcc ctcacgaact cgccggcctg
    10081 cgtcgtgggc gccttgcctt ctcgggcgtc ttggtgggcc cgctcgaccg tttccttctc
    10141 gggcatgggt actccttgtt gaggcctgct tcggggcgcg gcaactcctg gtccattcag
    10201 tcagtatcat gacaggctgg ccggggtcag acagtgccat ggatcacagc gcgagcctcg
    10261 acttgcgggg gctgagcgag ctccaactcc gcttgggttg gcaacggccc cccttcaaag
    10321 gagtatgtgg aggagagagg caagggagga ttgcagaaac tcacccgaaa acgacccagt
    10381 tcgcagtagc ggcgccggtc aagcgaccac agcgtactcg ctcttgacca agccgctcgg
    10441 gtattgctgc gtcgccacat gacggagccg aacgtcccgg tgcagacgcc cgaagagagg
    10501 aatcccgtct ccgatgagta cgggcacgcg agtgataatg agacgctgaa tgagccccgc
    10561 ctgcagaaac cgttgaatcg tgatcccacc gtcgacgtag aggtgatgaa caccacgagc
    10621 agcgagtcgc gatacgatct cagccggagg tcctgccatg tgttcaacga tcccgccgtg
    10681 ggccgcggac aggtcaaccg ggcgactgct caggaccact acgcgcttat caccatatgg
    10741 ccaggcctca aaggtcagca ccttttcgaa ggtcttgcga ccgatcacca gcgcatccac
    10801 cccggctata aactcgtcgt agccgtgggg ttcgccaccg cccgccggga gccagtcgag
    10861 atcgccgttc ggtcgcgcaa tgaagccgtc gaggctggtg ccgacaaaaa ccgatactgt
    10921 catcctgaac tccttacctg tggccgccta acggccccgc atcaggccta gtctgcctgc
    10981 attccgagcc tcttctagtc tcgggtccca aatagcattt tggaaggtca caattgcgcc
    11041 agtcttccct cgtctccctc ctggggttta cgtacgtcgg tcgggtcgag tccgctcaga
    11101 gccgaggtac ccggtggccg agcccaaaac cgccaagcac gtcccgagca agagcgaggg
    11161 gaagccgcgc cgcaagaaaa aggcggcagc cgaacctcgc tcccgcggca tcgcgcctga
    11221 cgcgatcggt tcgggcaccc cgcccgcggc cgtgactcgg ctggccgagt caatcgaggc
    11281 ggacggcggt acggtcctcg ccccctacaa ggaccccctg ggtggccatt ggcagatctt
    11341 cgccgcgctc ccgatcgatc tggttgagcc cactccctac caacgcgatc tctccaagcc
    11401 ccacgtcgag cgtctctcct tagccatgga gaaactagga cggtatctcg acccgatgat
    11461 cgtggtacgc ggagaccagc cggatgagga agagcccgcg ctgaacggag cggaggaggc
    11521 gcgcccgtat tggacgccga acgggaacca ccgcctggcc gctctccggg agctcggcgc
    11581 ccgctctgtt gtcgccatcg tggtgccgga catcgaggtc gcccaccgaa tcctgctgct
    11641 caacaccgag aaggcgcaca acctgcgcga gcgctccttg gaagtgatcc ggctcgccca
    11701 actgctggcc cagaccgagg atcgccccga acgcgtcttc gagatcgagt tcgaggagcc
    11761 ggccctcctc accatcggcc tctgttatca ggagaacggc cgcttcgccg gcggcgccta
    11821 ccatccggtg ctccgacgag ccgagaagtg gctggggtcg gcgctgccca aggcactgga
    11881 gactcggcgc gagcgagccg gacgcgttct cgaactcgac gaggccgtca ccgaggcgat
    11941 gaagaagctg aaggcgcggg gattcgatag cccatacctc aggccgttcg tggtcgcccg
    12001 gatcaatccg ctccgcttca agcggggcgc caaggccgag ttcgagcagg tggtggacca
    12061 gatgctggcg gcggcccagc gcttcgacgc ggccaagatc aagcccgacc aggtggcccg
    12121 ggcgggcggc gcgccggagg actag
//
LOCUS       DASYRV010000246         4614 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1339070, whole genome shotgun sequence.
ACCESSION   DASYRV010000246 DASYRV010000000
VERSION     DASYRV010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4614
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1339070"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1171)
                     /locus_tag="VGQ24_06375"
     CDS             complement(<1..1171)
                     /locus_tag="VGQ24_06375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454497.1"
                     /translation="MHAVRRLTRAAIVVLLGAGTVVWHACDRTAEPSIGPSSAPDFGA
                     ALIAQRRHTDALLAIPGVVGTAVTGLPDGRAGMLVLLERPDVAGLPQTLDGVPVTLQV
                     TGRLMAFSDPTKRQRPAPTGFSVGHPAITAGTIGARVRDALGRVYVLSNNHVLANSNG
                     ATIGDPEYQPGPFDGGTAADQIATLTDFQTITFSTTANNTIDAAIALSDVAVLDNATP
                     ADDGYGLPNATMYGDADGDGLFDDRNALLGLAVQKYGRTTHLTHGQITGVNATVTVCY
                     EVSGFECTKFARFVDQLIVSPGTFSGGGDSGSLLVTDDANLNPVALLFAGSSTVTIAN
                     RIDLVLLRFGVTIDGSAPPPPGPLTDLAVTSMSGPNLVIQGSTAGVNVTVKNVGNQ"
     gene            complement(1382..1960)
                     /locus_tag="VGQ24_06380"
     CDS             complement(1382..1960)
                     /locus_tag="VGQ24_06380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454498.1"
                     /translation="MHFNHPVCFLFLATAGLLPRNANAQAADSVAFHQGQWGAEFRIS
                     GGFFGLGALRFSSPTRALLVDVSTDYNHISGSGVAASSSDVAVAMDLGMRAHHAFGRR
                     LYRLITFGVSLGYSRQTTSTNNTKLEAFGAGPFVDLGATWLVTPHLGIGAKWGAAISY
                     THATLSDVINSAKIDQLHFSLGNFGLAGQLYF"
     gene            complement(2010..2246)
                     /locus_tag="VGQ24_06385"
     CDS             complement(2010..2246)
                     /locus_tag="VGQ24_06385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454499.1"
                     /translation="MIGDLEAAREAQRRARRDHIGATADLRVVAAELAQEIKLLDGIT
                     RYRFGDDPEVMAEWKAAKQVLGEPRDEGVARRAA"
     gene            2516..2767
                     /locus_tag="VGQ24_06390"
     CDS             2516..2767
                     /locus_tag="VGQ24_06390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454500.1"
                     /translation="MTWGPHELPHACSHFQFPADLGGHTRLPVVGEGERIDRAIGVRE
                     ETLVDRDQISVLREGRSSGRETAVVQRGSVIARREVRAG"
     gene            complement(3115..4329)
                     /locus_tag="VGQ24_06395"
     CDS             complement(3115..4329)
                     /locus_tag="VGQ24_06395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011882288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
                     /protein_id="HEV8454501.1"
                     /translation="MTQIAPELLDQLLAGYEKPEDLLGPGGIFDQLKKALAERVLGAE
                     LGHHLAQEAQATDAANHRNGSSPKTVHTDTSSLQLAVPRDRAGTFEPQLVPKHHRRLA
                     GFDEKVIALYARGLTVREMQAHLSELYGVTVSPDLISTVTDAVLEEVAAWQTRPLAPL
                     YPVIFFDALRVKIRDEGTVRSKAVYLALGVAPDGVKDVLGLWIEQTEGAKFWLRVMTE
                     LQARGVRDVLLAVVDGLKGFPEAITAVFPRTTVQTCIVHLLRHSLDFVGWQDRKHVAT
                     ALKAIYRAPSAAAAEQTLGEFAAGAWGQKYPPIVSAWRRQWEQVTPFFAFPLEVRRVL
                     YTTNAIESLHMQLRKALKVRGHFPNDEAALKLLYLVLRNVTRRWTKALTEWKAAMNQF
                     AILYPDRFTPEG"
BASE COUNT          790 a         1491 c         1574 g          759 t
ORIGIN      
        1 cctggttgcc gacgttcttc acggtgacgt tgacgcccgc ggtgctgccc tggatcacca
       61 ggttgggccc gctcatgctg gtgacggcca ggtccgtcag gggaccgggc ggcggtggcg
      121 cggagccgtc gatcgtgacg ccgaatcgga gcagaacgag atcgatccgg ttggcgatgg
      181 tcaccgtcga gctgccggcg aacagcagcg ccaccgggtt caggtttgcg tcatcggtca
      241 cgagcagcga ccctgagtca ccgccaccgc tgaacgttcc cggggagacg atcagctggt
      301 cgacgaagcg ggcaaacttg gtacactcga atcccgacac ctcgtagcac accgtgaccg
      361 tcgcgttgac gccggtgatc tgcccgtgcg tcaggtgcgt ggtgcggccg tacttctgca
      421 cggcgagccc gagcaatgcg ttgcggtcat cgaacaggcc gtcgccgtcg gcatccccgt
      481 acatggtcgc gttcggcagg ccgtagccgt cgtccgcggg cgtcgcgttg tccaggacag
      541 ccacgtccga cagggcgatc gcggcgtcga tggtgttgtt cgcggtggtc gagaaagtga
      601 tggtctgaaa gtcggtcagt gtcgcgatct ggtcggcggc cgtgccgccg tcgaacggcc
      661 ccggctgata ctcgggatca ccgatggtgg cgccattgga gttcgccaga acgtggttgt
      721 tggagaggac gtagacccgt cccagcgcgt cgcgcacgcg cgcgcctatc gtgccggcgg
      781 tgatcgccgg atgccctacc gagaagccgg tcggcgcggg ccgctggcgc ttggtgggat
      841 cactgaacgc catgagccgg ccggtgacct ggagcgtgac cgggacgccg tcgagcgtct
      901 gcggcaggcc ggcgacgtca gggcgttcca gcaggaccag catcccggcg cgtccatccg
      961 gaagaccggt gaccgccgtc cccaccaccc cggggatcgc gagcagcgca tcagtgtggc
     1021 gccgttgtgc aatgagggcg gcgccgaagt ccggagcgga cgagggaccg atggagggtt
     1081 ctgccgtgcg gtcgcacgcg tgccatacca ccgtgccggc accgaggagg accacgatgg
     1141 cggcgcgagt caacctgcgg acggcgtgca tggcgactcc cgtgaaatcg gagaactgat
     1201 cacgagtatg aagccgcgtg accgactcag caagttcaag agtacgggac tagactgagg
     1261 gtaactctac gccgcccgcc tggcctcacc gcactctgcc gcgagtgctt agctcctcat
     1321 cccggccgtc tcaccccgac aggttccatt gcgggtgagg cggcgcggtg gtggtgccgg
     1381 ctcagaagta gagctgccct gcgagcccga agttgccgag cgaaaagtgc agctggtcga
     1441 tttttgccga attaatgaca tcagaaagcg tggcgtgcgt gtaggagatc gcggcccccc
     1501 acttcgcgcc gatccccagg tgcggcgtta ccagccacgt ggcgccgagg tcgacaaacg
     1561 ggccggcgcc aaacgcttcc agtttggtat tgttggtgct ggttgtctgc cggctgtaac
     1621 caagcgacac cccgaaggtg atcagacgat agagtctgcg accgaacgcg tgatgggccc
     1681 gcatgccgag gtccatggct acggcaacgt cactggagga agcggcgacg ccagaaccgg
     1741 agatatggtt gtagtcggtg ctgacatcca ccaacagtgc tcgggtgggg ctgctgaaac
     1801 gaagggcacc caaaccaaaa aacccgcccg aaatgcggaa ctctgcgccc cattgtccct
     1861 ggtgaaaagc gactgaatcc gcggcttggg cgttggcatt gcgaggaagg agaccagcgg
     1921 tggccaggaa gagaaaacac actgggtgat tgaagtgcac ggtatcctcc ggtgagtggt
     1981 tccacgtcga tgattcggac gacctacacc tacgccgcac gcctggcaac tccctcatcg
     2041 cgcggctcgc ccagcacctg cttcgccgcc ttccactcgg ccatcacttc cggatcatcc
     2101 ccgaaccggt agcgggtgat tccgtccagc agcttgatct cctgcgccag ctcggccgcg
     2161 accacacgga gatcggccgt ggcgccgata tgatcgcgcc gcgccctccg ctgtgcctcc
     2221 cgtgcggcct cgaggtcccc gatcatgcga cccaggtcct cgagtaaccc cggggccagc
     2281 ccttccttga tgagcagcgc tcgctggttt ttccgccgcg gtgagcagcg ctttgaccgc
     2341 cgtgaggaag acgctggtgg tgcagctggt ggccgggagc gccccagctc ctcgcggcgg
     2401 gcccgggccc ccggccgcgc cgaccagccc gcggtgttgt cgtgccgagt tcccgtgggc
     2461 gcgggcgagg agctcgtcga agcgggcgag gaccgatgca aagtccggcg cggccgtgac
     2521 atggggcccg catgaactcc cgcacgcgtg cagccatttc cagtttcctg cggacctcgg
     2581 tggtcatacg cgcctcccgg ttgtcgggga gggcgaacgc atcgatcggg ccatcggcgt
     2641 tcgcgaagaa acgctggtgg atcgcgacca gatctccgtc ctccgcgaag gacgatcgag
     2701 cggccgcgaa acagccgtgg tgcagcgcgg cagcgtcatc gcccgtcgcg aggtgcgcgc
     2761 agggtgacgc gaaacaaact ccctggaccg cggcgccggc tccgagagcc gctacgtcag
     2821 ctccgaggag cgcaacggcc gcaccgagga gcgcgaaggc agctccgaac gccgagaagg
     2881 aagggccgag cggcgcgaga gaggctccgg gagccgcgac agatgctcgg ggggccgcga
     2941 ggggacctgg gaggaccacc aaggaggctt cgagccccgc gagggagctt ccggggagcg
     3001 cgaaggcagt ggcgggtagc gagaaggaga ctgcgaggac cttctgctag agtacgcccg
     3061 ccttcgcctg ggtttcgccg gaggtgtccg gaattctgtg tgtgagccga atcgctaccc
     3121 ctcgggggtg aatcggtcgg ggtagaggat cgcaaactgg ttcatcgcgg ccttccattc
     3181 ggtcagcgct ttggtccagc gccgggtcac attccgcagc accaggtaaa gcaatttgag
     3241 ggcggcttcg tcattgggaa agtggccccg taccttgagc gccttccgca gctgcatgtg
     3301 caagctctcg atggcgttgg tcgtgtagag cacgcgccgg acctcgagcg gaaaggcaaa
     3361 aaacggcgtc acctgctccc actgacgccg ccaggcactg acgatcgggg gatatttctg
     3421 gccccacgcg ccggccgcaa actcgccgag cgtctgctcg gccgcggccg cgctcggggc
     3481 ccggtagatc gccttgagcg ccgtggccac gtgtttgcgg tcctgccaac cgacaaagtc
     3541 gagggagtgc cgcagcaggt gcacgatgca ggtctgcacc gtggtccggg gaaacaccgc
     3601 cgtaatcgct tcggggaagc ctttcagccc gtcgaccacc gctaacagca catcgcgcac
     3661 gccgcgcgct tgcagctcgg tcatcacccg gagccagaac ttcgctccct cggtttgctc
     3721 tatccagagc cccaggacgt ccttcacccc gtctggggcc acgccgagcg ccagatagac
     3781 cgccttgctc cggacggtgc cttcatcgcg gatcttcacc cggagggcat cgaagaagat
     3841 caccggatag agcggcgcca gcggccgcgt ctgccacgcg gcgacctcct ctagcaccgc
     3901 gtcggtgacg gtgctgatca agtcggggga gaccgtcacc ccgtagagct cgctcaggtg
     3961 cgcctgcatc tcgcgcaccg tgagcccccg ggcgtagagg gcaatcacct tctcatcgaa
     4021 gcccgccaac cggcggtggt gcttgggcac cagctggggc tcgaaggtcc cggcccgatc
     4081 gcgcgggacg gcgagctgga gggagctggt gtcggtgtgg accgtcttcg gactggaccc
     4141 gttgcggtga ttggccgcgt cggtggcctg ggcttcctgc gccagatgat ggccgagctc
     4201 ggcacccagg acgcgctcgg ccagcgcctt cttcagctga tcaaagatgc cgccgggccc
     4261 gagcaggtcc tcgggctttt cgtaccctgc caggagctga tccaacagct cgggggcaat
     4321 ctgggtcatc ttcgccttcc ttcccacggt cgaagtatga cccacacaca aaaatcagga
     4381 caggctcgtt tcgccgggcc ggtcttgggg tgagagcact tcgatgacga ggtccggccc
     4441 gagccggttc tctttcacgc ggccgccgcg ggccgacagc ttcaagcgct gattctatgg
     4501 aagcgactgg cctcaccgcg agcgatcgcg tagcgtcggc gtttcgagac gatgcatgcg
     4561 cgctcgtcac aggaggccag ccatgtactt cgccggactc gatgcgcatc taaa
//
LOCUS       DASYRV010000247         3089 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_930161, whole genome shotgun sequence.
ACCESSION   DASYRV010000247 DASYRV010000000
VERSION     DASYRV010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3089
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_930161"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..208)
                     /locus_tag="VGQ24_06400"
     CDS             complement(<1..208)
                     /locus_tag="VGQ24_06400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454502.1"
                     /translation="MVQFTLATPLGIPVHPSDFDQALRELQRAGRLEEVNRTAVNEVM
                     DALFRDGTLKDASGRWRSGRPDPDQ"
     gene            243..488
                     /locus_tag="VGQ24_06405"
     CDS             243..488
                     /locus_tag="VGQ24_06405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454503.1"
                     /translation="MFGVTKHGVLNGRLAGGLRAGQTAWRPCRGRHRNRSTTQNWGYI
                     AGEVPDWRQLAHRRQEELTAAGLQMRLDHRAVRLDPG"
     gene            complement(581..1840)
                     /gene="ltrA"
                     /locus_tag="VGQ24_06410"
     CDS             complement(581..1840)
                     /gene="ltrA"
                     /locus_tag="VGQ24_06410"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: protein motif:HMM:TIGR04416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HEV8454504.1"
                     /translation="MGRSGPEGKPFQIPKQLVWEAYKQVKANKGAAGADGQSIEDFEA
                     DLRNNLYKIWNRMSSGTYFPPPVRAVEIPKPHGDGTRMLGIPTVADRVAQTTAALALE
                     PRTESIFHDDSYGYRPGRSPLMAVAKCRERCWKKDWVIDLDVRKFFDSVDHDLMVKAV
                     EANITPDQRWVVLYVKRWLKAPVLMPDGRLAERDRGTPQGSAVSPVLANLFMHYAFDS
                     WLEREFPAVEFERFADDAVVHCATKRQARQVLEALGQRMAQVGLALHPDKTKVVYCKD
                     RKRRLDHEHTSFTFLGYTFRVRKAPTRDGTSMFAAFLPAVSRDALKKMGGEVRRWRIN
                     LRTTSDLGELARWMNPVIRGWMSYYGRFYRTELHGLLRRINTYLVRWARRKFKRLRAF
                     KRARRWWNGLLNRQPALFAHWTWMTEF"
     gene            complement(2292..2537)
                     /locus_tag="VGQ24_06415"
     CDS             complement(2292..2537)
                     /locus_tag="VGQ24_06415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454505.1"
                     /translation="MWATVLVMIMQLGTLILVAWATREFGTDHTFVVLLRHARGEESL
                     CEVGSDVLDVFAAHEMEDCWPFGVALRGEASNHLKVR"
     gene            complement(2776..>3089)
                     /locus_tag="VGQ24_06420"
     CDS             complement(2776..>3089)
                     /locus_tag="VGQ24_06420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454506.1"
                     /translation="QASVELGNPARAIRRAETVDTSGLADGLLERRCHHLIDVARGHS
                     QLRDDDSAVATLLEAEQVAPQELKYNALVRGTIRELLRRERRTIRPALRGLASRTGVL
                     D"
BASE COUNT          508 a         1094 c          926 g          561 t
ORIGIN      
        1 actggtcggg gtctggtctc ccactgcgcc atcgaccgct ggcgtccttc agcgttccgt
       61 cgcggaacag tgcgtccatc acctcgttca ccgctgtgcg gttgacttcc tcgaggcggc
      121 cggctcgttg cagttcacga agggcctggt cgaagtcgct ggggtggacc gggatgccga
      181 gtggtgtcgc gagggtgaac tggaccatgc tggtgtcccc catgccgttc gctggacggt
      241 gcttgttcgg cgtgacaaag cacggggtgc tcaacgggcg gcttgctggc gggctgcgcg
      301 ctgggcagac agcatggcga ccgtgccgcg gccgacaccg caaccgctcg accacccaga
      361 actggggcta catcgccggg gaggtccctg actggcggca gctggcccat cgccgccagg
      421 aggagctgac cgccgcaggg ctccagatgc ggctggacca tcgcgcggtg cggctagacc
      481 ccggctagac cgccgggtgg cccgggggaa tctcaccccc gggctcccac agaacggaac
      541 gtgacggtct cccgtcattc cgctcgtctc atctgatccg tcagaactcg gtcatccagg
      601 tccagtgggc gaacagggcg ggctgcctgt tcagcagccc gttccaccac cgcctggccc
      661 gcttgaatgc cctgagccgc ttgaacttcc gccgcgccca gcgcaccagg taggtgttga
      721 tgcgccgtag gaggccgtgc agctcggtcc ggtagaacct gccgtagtag gacatccagc
      781 cacgaatgac cggattcatc caccgggcaa gctcgcccag gtccgaggtg gtgcgcaggt
      841 tgatccgcca gcggcggacc tcgcccccca tcttcttgag ggcatccctg ctgaccgctg
      901 ggaggaacgc tgcgaacatg ctcgtcccgt cacgggtcgg ggccttacgc acccggaacg
      961 tgtaccccag gaaggtgaac gacgtgtgct cgtgatcgag ccgccgtttc cggtccttgc
     1021 agtacaccac cttggtttta tccgggtgca gggccagccc gacctgggcc atccgctgcc
     1081 cgagcgcttc cagcacctga cgtgcctgcc gcttggtcgc gcagtgcacc accgcgtcat
     1141 cagcgaaccg ctcgaactcc acggccggga actcgcgctc cagccaggag tcgaacgcat
     1201 agtgcatgaa caggttggcc aggacgggtg ataccgctga tccttgcggg gtcccgcggt
     1261 cccgttccgc cagcctgcca tcgggcatga ggaccggtgc tttcagccac cgtttcacat
     1321 acagcaccac ccaccgctga tccggggtga tgttcgcctc caccgccttg accatgagat
     1381 catggtcaac cgagtcgaag aatttccgga catccaaatc gattacccag tccttcttcc
     1441 agcacctttc gcggcatttc gccaccgcca tcagcggtga cctgccgggc cggtacccgt
     1501 aggagtcgtc atggaagata gactccgtcc ggggttccag cgcgagcgcg gccgttgttt
     1561 gcgcgacccg gtcggcgaca gtcggaatgc cgagcattct cgtcccgtcg ccatgcggtt
     1621 ttggtatttc cactgcccgc accgggggcg ggaaataggt ccccgacgac atccggttcc
     1681 agatcttgta gaggttattc ctcagatcgg cctcgaagtc ctcaatggac tgcccgtctg
     1741 cccctgcggc acccttgttc gccttgacct gcttatacgc ctcccacacc agctgctttg
     1801 gtatctgaaa cggttttcct tccggacctg acctgcccac tcgtctcctc ccagaacatc
     1861 gcctggttgc tcgcgcgaac acgcccagat gagccagccc cttcgctcca ctcccgttac
     1921 aggagtttca ccgctactac gagccggtcc gccagcacac gccgcatcgg tactcagcac
     1981 ttcacggttt cagccgcccg gtgcgctccc tctcgccccg ccacacgcag caaaggctgt
     2041 atcggcacgc gccttcccac gttctgcaca caagccgcag accaggctca cgccacctgc
     2101 acgccggaca ccacctggcc agtcagcggg ctcccgccag gctcatcccg ggattgcatt
     2161 gagaccccgg tttcgatgcc gtttcctact ctcggcgctt cagcagtggt tcactcgcgt
     2221 tcgtcttcct gatccccatc tgacggctct tacaccgcct tttccccaac gctcagcacg
     2281 acagtcttca gctaacgcac cttgaggtga tttgacgcct ccccccgcag ggcgacgccg
     2341 aagggccagc aatcctccat ctcatgtgca gcgaacacgt caagaacgtc gctacctacc
     2401 tcacaaagcg actcctctcc gcgcgcgtgg cgcaacaaca ccacgaaggt gtggtcggta
     2461 ccgaactcgc gcgtcgccca ggcgaccagg atcagcgtcc caagctgcat gatcatgacc
     2521 agaaccgtgg cccacatcgc ctttctccct gtcgcgttgg caggggcctc ggaggcgtgg
     2581 ccctgggggt gaccacacgc ctccgagact cccctggctg ggggcgcagc tcttcggccg
     2641 tggagaagag cctgcgcccc agcggtgaag ccgtgcgcca gtcgcagcgg ctgacttgcc
     2701 ggtgaagtta gaggaggacg acgcgcgcga cccgcacaaa ctgttcgggt gagctgtcag
     2761 ccgatgagca gagcctcagt caaggacgcc ggttcgactg gcgaggccgc gcagagccgg
     2821 cctgatcgtg cgccgctccc ggcgcagcag ctcgcggatg gtcccgcgaa cgagcgcgtt
     2881 gtacttcagc tcctgcggcg cgacctgctc ggcctccagc agggttgcca cggcgctgtc
     2941 gtcgtcgcgg agctgactgt gcccgcgcgc cacgtcgatc agatggtgac agcgacgctc
     3001 cagcagcccg tccgcaagcc ccgaggtgtc tacagtctcc gcccgccgga tcgcccgggc
     3061 ggggttgcca agctcaaccg atgcttgaa
//
LOCUS       DASYRV010000248        10900 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2755297, whole genome shotgun sequence.
ACCESSION   DASYRV010000248 DASYRV010000000
VERSION     DASYRV010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10900
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2755297"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1920)
                     /locus_tag="VGQ24_06425"
     CDS             complement(<1..1920)
                     /locus_tag="VGQ24_06425"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEV8454507.1"
                     /translation="MFCSRCGSEITGKSKFCPSCGLDLMATTPVHAIATGVLQELDLV
                     REALASEYEIIEELGRGGMAMVYRAKDRQLEREVAIKVLPFSLAFDTEFVERFQREAR
                     TAAQLEHPNIIAIYRVGRSGRVIYFVMKFLRGSSLSVLLGNRKKLTPPEIRRLLLEAG
                     SALGYAAQRGIVHRDIKPDNIMFDEFGQSVLTDFGIAKAASGQKLTGTGMSIGTPHYM
                     SPEQARAQPIDGRSDIYSLGVVAYQCLTGTVPYDGEDSFSIGYKHITEPIPTPSLITA
                     DERRIFEIIKRMLMKDPFDRFQTCEELIASFQGQPIAAAGSVRASAVGSFSGAAAVPA
                     GAGASMGGGGLPPIVSQPTTPLDSPLVNRRLTPRERREVPRRVADRSLAMRPTTSSWA
                     WLWVLLAVLGGLGGAFYYYKARGFAPGTSVADTVVSSAPRQGDSLAGTDTAVSQAPRA
                     TDSTVPAVSVPGGPDGSAPKASASDSATSPGPAPGPASGDVVGPIDSGGIRLIGLPRG
                     STVMIDEQPVTQAVTKLPPGPHALAISAPRFNFYSDTIVVRPGQIQELKPQLTQLGAP
                     APAPRKDQGRAAVGCVPGPGYNADGSCFDERPKPVNAPFVTVPADAGPSPPPSLLWIK
                     VSAEGRTVDIMRLRPS"
     gene            2173..2625
                     /locus_tag="VGQ24_06430"
     CDS             2173..2625
                     /locus_tag="VGQ24_06430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454508.1"
                     /translation="MVPYHTIAFSQQKLRAALRRAAGQEPAFSYGFVVHSRRQSDRPT
                     LGLITLHGESLAFNERLLKSLDGLPLWLFGHARITLMPGTSINPEEGGRTKPTDRPLA
                     SMLMHIATFDTSTGVTQHLVQVEAVVRAESLVQPLLVLTPSRPAAWPM"
     gene            complement(2730..5051)
                     /locus_tag="VGQ24_06435"
     CDS             complement(2730..5051)
                     /locus_tag="VGQ24_06435"
                     /inference="COORDINATES: protein motif:HMM:TIGR04514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GWxTD domain-containing protein"
                     /protein_id="HEV8454509.1"
                     /translation="MFSPTVRLKSPGFFFQPRCWNLVGTILLTLLPIPPLSLQAQSPA
                     DRIELERFRDSLASTSDSTGLLVLEKRMIDSAKVERGNSLLHLKLGFLSLRLGDLGGH
                     SHYDDAASEFQWAIDLQPRWPYAWYGMGLAEYGVGDSQVSFVTGLKTMLGKDALTRSA
                     VAFAKSAEVDPGFVQGLVDLANTALRQRVNIKLGVALEALRRAGHTAAGADPQVLLAR
                     GRVEREVGDGDSALAAFNGYLQYGPNRSLGLLEVSRTLFLLGRFDGLTPYFEGAAIDD
                     SVSVAGYRADLSTIASDSILQEFDRQSGSRRAGYLRRFWAQRDQVELRSNGERLREHY
                     RRLFYARRTFQLTSNNRHYDIVERYRSGSRDFDDRGVIYIRHGEPSKRASYAAPGLEP
                     NESWRYSRADGDLIFHFIAREDVQDFKLVESLFDVLGFSDAVKLQGQVNGAADNAVAE
                     QLMLSREQLSPIYRRLQGAGHMSSGRYQSQERRAGQQSIALGTSSDSYELRFPKELKA
                     HWEVLAVGRDSTGHQVQIAYAIAGSSLEPVTVTRGYLYSVRLRFVAMDERGQVVASLD
                     TTRHFVAPAPVPPNEHLVGRVGTTVPTGSIKYRLAIQQGEAAGLTIPRDSVRVGPVNS
                     AALSLSDLVLGTRTANLTWRRTDDDTVLFNPLRTYRRSDEMELYYEIEGLKPTPYTVE
                     LTVRKKGSSGGLFKKIFGGGGAALRIKFDEQATTSTVSTHRRLNLDRLKPGSYVLELV
                     VADAEGRKDRRRQEFQVVEEKEPGQRGSRAAGQ"
     gene            complement(5075..7207)
                     /locus_tag="VGQ24_06440"
     CDS             complement(5075..7207)
                     /locus_tag="VGQ24_06440"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEV8454510.1"
                     /translation="MALPFVVTALVCSHQSNTRPGTSTASASGAVPSGSPMSRAELPA
                     APRVPDPIGLTVVYPALTDLVRVRDSSFLFGSVANNNVRLSINGTPVRVWRNGAWLAW
                     VPFPPDTLMQFRIEARLAADSSVLVYPVRRDLRYFPGVAAKGSAWIDSMALSPRGQVW
                     LPPTEYLTLSARAAEGSVVRLRLPSGEIIRLLPQTQPEELLPGTRAFERDTTKLRTPD
                     EVRYVGVVRGRETGPDPGPVLHGPSASLVRVLARAALHCVTGTRCPAPYDELVSPEGP
                     WAVLEAARDGDTVRIRWPLQLALLDTLPIVAEFDDDTAGSGTTDSTTVGRAVPGGTYH
                     WFFPTGTRGAVTGRINDDVRIRLSPQAEAWVPVADAQPLPAGVPAPHAIVGAVTLTPG
                     DERATLRIPLSQRVPFQVLETESSLTLRLYSAAGDVNWMRYGRDSLVARLSWAQPERD
                     EVTLTVNLTAPVWGYRTRWSRNDLLLEIRRPPRILRSRPFQGRTIAVDPGHPPLGATG
                     PTGLREAEANLAVALQLRRMLESAGARVLMTRTTDTAVDLLNRVALADTGGAELLISI
                     HNNALPDGVNPFTNSGSSVFYNQPRSVPLAIEIQRSLVHRLGLPDLGISRGDLAVVRP
                     TWMPAVLCEGMFLIMPDQETALRSARGQWLYARAVFDGIRRFLRDHAEAQSSRRVGRP
                     PPGASPKANPTTSPGAPAAGVSNGDVAH"
     gene            7388..8416
                     /locus_tag="VGQ24_06445"
     CDS             7388..8416
                     /locus_tag="VGQ24_06445"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HEV8454511.1"
                     /translation="MSSGSVRVSVFGKTDQGRARDHNEDTFLVADLSTGNASLQPAVR
                     SHEIGPRGSLFMVADGMGGAAAGELASAMAADLIYRHMITAWASDSTPNAARFAFRMK
                     EAVELANERIHSYAREHPEVRGMGTTVTAAGVYGSDLYLTQIGDSRAYLVRDSEAIQL
                     TKDQSLMQRLVDAGELTEDEAEQSERRNIILQALGPDPRVRVDLTRQSLRGGDTLILC
                     SDGLSGLVRREEFAGLAREHADLAALCSALIDLANGRGGPDNITVVTARFEGEGLPEA
                     HETDGVGYTTYQLPPGTGEHGADTTTETEPIQPRTSNSSSTLEHLRSLGFIVVILGVL
                     LLLLAVWR"
     gene            8543..9649
                     /locus_tag="VGQ24_06450"
     CDS             8543..9649
                     /locus_tag="VGQ24_06450"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEV8454512.1"
                     /translation="MPIYFRTHGVGLVEIGQLNKLSLPWSIKWLWAPLIDRHGTRRQW
                     IAGCLAGLAALTFALGTLQPGKLGTGLWIILVLIVLLSATQDVAIDAYTIQSTTIREL
                     GVANSVRITLYRVAMLTAGGLLVWLAGRIGWSESFSVGSVVLAALALCAFLLPAVDRA
                     AGRAASLWEPLRELLSRPGIVTVVIFALIFKLDIAALEPMMRPFWVDRGLSLAEIGAV
                     VASGRLIATIAGAAAGGVFTTRYGIFTGLWVLGLIQALSALVYWATATFASSNSLVVL
                     AAYFESFAAGLGTSAYLAFLMSICEKRYAATQFAVLSALLAVTRYVAGGYSGGLAERL
                     GYGNYFLVTFFLGLPAFLLIPRLRRASRAGRAPA"
     gene            complement(9646..>10900)
                     /locus_tag="VGQ24_06455"
     CDS             complement(9646..>10900)
                     /locus_tag="VGQ24_06455"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HEV8454513.1"
                     /translation="RAGRSLLLASDLERGAGQQIAGLTEFPPPLALASLGDPAVVRWA
                     ASVTAQEARAVGINWVFAPVADLDVLPDNPIVQTRAFGADANQVATCVRHWVEGCQAA
                     GALACAKHYPGHGRTTVDSHITLPVVEASAAALRASDLLPFTVAIECGVASIMTAHVA
                     YPGLDASGLPATLSRTLLGGELRDRSSFDGLVVTDALIMDGALLGRRESDAAVEAIQA
                     GADLLLYPNDPHRVRDALQAALSSGTLSEARLEESLRRYDRALAIATAPTPPVTRGPF
                     ESADALADALLKQGMARGTAPSLTGPLDLIVVDDDVGGPYPPGPSDYAHRALGPELIG
                     RYTGGSRVVLVFAEPRAWKGRSGFGAGTREALSHHGSGADLIVLFGHPRLLADLPSQA
                     PVLLAWHRQRLMQEAVARWLRQRLG"
BASE COUNT         1868 a         3540 c         3680 g         1812 t
ORIGIN      
        1 ggagggacgg aggcgcatga tgtccaccgt gcggccttcc gccgagactt tgatccacag
       61 cagcgaaggc gggggggagg gcccggcgtc ggcgggtacc gtcacgaacg gcgcgttgac
      121 cggtttcggg cgttcatcga agcacgagcc gtcggcgttg taccctggac cgggcacgca
      181 gccgacagcc gcacgccctt gatctttacg tggcgcaggc gcgggggcgc cgagctgggt
      241 gagctggggc ttcagctcct ggatctggcc tgggcggacc acgatcgtgt cggagtagaa
      301 gttgaaccgg ggcgctgaaa tggccagcgc gtgcggccca ggcggaagct tggtcactgc
      361 ctgggtcacc ggctgctcat cgatcatcac ggtcgagcct cggggcaaac cgatcaggcg
      421 gatgccgcca ctatcgatcg ggccgactac gtcgcctgag gcagggcccg gagccggccc
      481 ggggctggtg gcggaatccg acgccgacgc cttgggagct gagccatcgg gtccgcccgg
      541 tactgaaaca gcgggcaccg tgctgtcggt agcccgcggc gcctgggaga cagcggtatc
      601 ggtgccggcg agcgagtcgc cttgtcgtgg cgcggagctc accaccgtat cggccacgct
      661 cgtgcccggg gcgaatccgc gggccttgta gtagtagaac gccccgccga gtccaccgag
      721 tacggccagg agaacccaca gccacgccca cgatgaggtg gtggggcgca tcgcaagcga
      781 gcggtccgcc acccgccggg gcacctcgcg ccgttcgcgc ggcgtcagac gccgattgac
      841 caggggcgaa tcgagcggag tggtcggctg gcttacgatt ggagggagcc ctcccccacc
      901 catggaggct ccagcaccgg ccggtaccgc ggcggctccg ctgaagcttc cgaccgcgct
      961 ggcccgcacc gagccggcag cggcaatcgg ctgcccctga aacgaggcga tcagttcctc
     1021 gcaggtctgg aaccggtcga agggatcctt catgagcatc cgcttgatga tctcgaagat
     1081 gcggcgctcg tcggcggtaa tcaggctcgg cgtggggatc ggctcggtga tgtgcttgta
     1141 cccgatggag aagctgtcct cgccatcata gggcacggtg cccgtcaggc actgataggc
     1201 cacgaccccg aggctgtaga tgtcgctccg cccatcgatc ggctgggccc tggcctgctc
     1261 cgggctcatg tagtgggggg taccgataga catgcctgtg ccggtcagct tctgccccga
     1321 ggccgccttg gcaatgccga agtcggtcag gacgctctgg ccgaattcgt cgaacatgat
     1381 gttgtccggc ttgatgtcgc ggtgcacgat gccccgttgg gccgcgtagc ccagggcgct
     1441 gcccgcctcc agcaggaggc gccggatctc cggaggggtc agcttcttgc gattaccgag
     1501 caggacggag agggagctgc cccggaggaa cttcatgaca aagtagatca cccgtccgga
     1561 gcgaccgacc cgatagatgg cgatgatgtt ggggtgctcg agctgggccg ccgtgcgggc
     1621 ttcgcgctga aagcgctcca cgaactcggt gtcgaacgcg agggaaaagg ggaggacctt
     1681 gatcgccacc tcgcgctcga gctgacgatc cttggcccga tagaccatgg ccatcccgcc
     1741 acggcccagc tcctcgatga tctcgtactc cgaggcgagg gcctcgcgca cgaggtccag
     1801 ctcctggagc acgccggtgg cgatcgcatg aaccggtgtg gtcgccatga ggtcgagacc
     1861 gcaggagggg cagaacttcg atttcccggt gatttcgctg ccacagcggg agcagaacat
     1921 gcgcgcaagc tacgctgccg cccgtccgag tcaagcggaa acgcgtggcg tatcgcgaga
     1981 ggggttgcaa tcagcggggc ggcggggcgg cggggcggcg gggccggatt ttcaagcgta
     2041 agtctcgtga tatcaacgtt cagagggaaa acggtcccgc tgccccgctg ccccgctttc
     2101 cgccttcgaa tggcacgtca cgtgcagcga ccatcacacc cgaccaaacc cgcgccatca
     2161 cccggagagc ttgtggtacc gtatcacacg atcgccttca gtcaacagaa gctcagggcc
     2221 gcgctgcgcc gtgcggcggg ccaggaacct gcgtttagct atgggttcgt ggtacactct
     2281 cgccggcaga gcgaccggcc gaccctgggg ctgatcaccc tgcacggtga gagtctcgcg
     2341 ttcaacgagc gcctgttgaa atcactggac ggccttccgc tctggttatt cggtcacgcc
     2401 cgcatcaccc tgatgccggg aacctcgatc aacccggagg aaggtggccg caccaagccg
     2461 accgaccggc cgctcgcttc gatgctgatg cacatcgcta ccttcgacac cagcaccggt
     2521 gtcacccagc acctcgtcca ggtggaggcg gtggtccggg ccgagagcct ggtccagcca
     2581 ctgctggtgc tgaccccttc gcgtccggca gcctggccga tgtaagcggg gcagcgggac
     2641 agcggggcgg cggggcggga tcggtaagaa gaaccctctg atgcaatgga tgcgtcagag
     2701 ggttgtcgtt tagtgctgcc cggcggcgac tactgccccg ctgccctgct gccccgctgc
     2761 cccggctctt tctcctccac cacctgaaat tcctgccggc ggcggtcctt tctgccctca
     2821 gcatcggcca ccaccaactc gaggacgtaa ctccccggct tgaggcggtc aagattgaga
     2881 cgccggtgag tgctgacggt ggacgtagtg gcctgctcgt cgaacttgat gcgcagggcc
     2941 gccccgcctc cgccgaagat cttcttgaac agccccccgc tcgatccctt tttccgaacc
     3001 gtgagctcga ccgtatacgg cgtcggcttc aatccctcga tctcgtaata gagctccatt
     3061 tcatcgctgc gccggtacgt gcgaagcgga ttgaacagca ccgtgtcgtc gtcggtacgg
     3121 cgccaggtga ggttggcggt acgagtgccc aggaccagat cgctgaggct cagggccgct
     3181 gaattcacgg ggccgacccg tacgctgtcg cgcggaatag tgaggccggc ggcctcgccc
     3241 tgctgaatag cgagccggta cttaatggag ccggtcggaa cggtggtacc gacacggccc
     3301 accaggtgct cgttcggtgg gacgggcgca ggggcgacga agtggcgggt ggtgtcgagc
     3361 gaggccacga cctgaccgcg ctcgtccata gccacgaaac ggagccgcac gctatagaga
     3421 tagccccggg tcacggtaac gggctcgaga ctggaacccg caatggcata ggcgatctga
     3481 acctgatggc cggtggagtc ccggcccacg gcgaggacct cccagtgggc cttgagctcc
     3541 ttgggaaagc gcagttcgta gctgtcgctg ctggtgccca gggcgatgct ttgttgccct
     3601 gcccgccgct cctggctctg gtagcgaccg ctgctcatgt gcccggcacc ctggagccgc
     3661 cggtagatcg gagagagctg ctcccgggat agcatgagct gctcggccac cgcgttgtcc
     3721 gccgctccgt tgacctggcc ctggagtttg accgcatcgc tgaatccgag cacgtcaaag
     3781 aggctctcga ccagcttgaa gtcctggaca tcctcccggg cgatgaaatg gaagatcaga
     3841 tctccgtcgg ctcggctgta ccgccatgac tcgttcggct ccaggcctgg cgccgcatag
     3901 ctggcccgct tgctgggctc accatggcgg atgtagatga caccgcgatc gtcgaaatca
     3961 cggctacctg atcgataccg ctcgacgatg tcgtagtgcc ggttgttcga cgtcagctga
     4021 aaggtcctcc gggcatagaa cagccggcgg taatgctccc gcagccgttc gccattcgag
     4081 cgaagctcga cctggtcccg ctgggcccag aaccgccgga gatacccggc gcggcgggaa
     4141 cccgattgcc gatcgaactc ctggagaatg ctgtccgacg cgatggtgga gagatcggcc
     4201 cggtagccgg caacggacac ggaatcgtcg atcgccgcac cctcgaagta gggtgtcaga
     4261 ccatcgaagc ggccgagcag gaacaacgtg cgggagactt cgagcaaacc gaggctgcga
     4321 ttgggcccgt attgcagata gccgttgaag gcggcgagcg cggagtcccc atcaccaacc
     4381 tcgcgctcga ctctgccccg ggccagcagc acctggggat cggcccccgc cgctgtgtga
     4441 ccggcccggc gaagagcctc gagcgccacg ccgagcttga tgttgacccg ctgccggagc
     4501 gccgtattcg cgagatccac cagcccttgc acgaacccgg ggtccacctc ggcggatttg
     4561 gcaaatgcca ctgccgaccg ggtgagcgcg tcctttccca acatcgtctt gaggccggtc
     4621 acgaacgaga cctgggagtc acccacgcca tattcagcca gccccatgcc ataccaggca
     4681 tagggccacc tcggctggag atcgattgcc cactggaact ccgaggcggc gtcgtcatag
     4741 tgcgagtgtc cgcccagatc acccagccgg agtgacagga atccgagctt gaggtgaagc
     4801 aggctgttcc cccgctcgac cttcgccgag tctatcatcc gcttttcgag aacgagaaga
     4861 ccggtggaat ccgaggtgga cgccagggaa tcgcggaaac gttccaactc gattcgatcg
     4921 gccggactct gggcttgaag ggagagaggg ggaatcggca acagcgtcag gaggatcgtg
     4981 ccgacaaggt tccagcaccg cggttggaag aagaaccctg gacttttcag ccgcacagta
     5041 ggcgaaaaca tcagccggac ctcgtcacta cactctaatg agcaacatcg ccgttcgaga
     5101 caccggccgc tggcgcaccg ggcgatgtgg tgggattcgc cttaggagac gcacctggcg
     5161 gcggacgccc cacacggcgg gaagactggg cctccgcatg gtcgcggagg aatcgacgga
     5221 tcccgtcgaa aacggcgcgg gcgtacagcc actggccccg agccgacctg agcgcggtct
     5281 cctgatccgg catgatcagg aacattccct cacagaggac cgcgggcatc caggtggggc
     5341 gcaccacggc gagatcgcca cggctgattc cgagatcggg taacccgagc cggtggacca
     5401 acgagcgctg gatctcgatc gcgagcggta cgctgcgcgg ctggttatag aatacgctgc
     5461 tgccgctatt ggtgaagggg ttcaccccgt cgggcagagc gttgttgtga atcgagatca
     5521 gcagctccgc acctccggta tcggcgagag ccacgcggtt caggagatcc acggcggtgt
     5581 cggtcgtgcg cgtcatcagc acccgggctc cggccgactc caacattctc cggagctgga
     5641 gcgccacggc caggttggcc tcggcctccc ggaggcccgt cgggccggta gcaccgaggg
     5701 gtggatgccc agggtccacc gcgatggtcc ggccctggaa aggacggctc cggagaatgc
     5761 ggggcgggcg tcggatctcg agcaggagat cgtttcggct ccaccgggtg cgatagcccc
     5821 agaccggggc ggtgagattg accgtgagcg tcacctcatc tcgctcgggt tgcgcccagc
     5881 tcagccgtgc cacgagagag tcgcgaccat accgcatcca gttgacgtct cccgctgcgc
     5941 tgtagagccg gagggtcaga ctgctctcgg tttccaggac ctgaaacggg actcgctggc
     6001 tgagcggtat gcggagcgtc gctcgttcgt cgccgggcgt cagagttacc gcgcctacga
     6061 ttgcgtgcgg ggcgggcaca ccggctggga ggggctgcgc gtcggccacc ggcacccagg
     6121 cctcggcctg gggagagagg cggatacgca cgtcgtcatt gatccggcca gtgaccgctc
     6181 cacgggtgcc ggtggggaag aaccagtggt aggtgccacc gggaaccgcc cggccgacgg
     6241 tggtgctgtc ggttgtgccg gaaccggcgg tgtcgtcgtc gaactcggcg acaatcggaa
     6301 gggtgtcgag gagcgcaagc tgtagcggcc agcgaatccg aaccgtgtcg ccgtcccggg
     6361 ctgcctcgag gactgcccag gggccctcgg gagataccag ctcatcatat ggagcgggac
     6421 accgggtacc ggttacgcag tgcaacgccg cgcgggccag cacccgaacc agtgacgcag
     6481 atggtccatg cagcaccggc ccgggatcgg gtcccgtctc gcgcccacgc acgacaccga
     6541 catatcgcac ttcgtccggt gtacggagct tggtggtgtc ccgttcgaac gctcgggtac
     6601 cggggagcag ttcctcgggc tgcgtctgcg gcagaaggcg gatgatttcc ccgctgggaa
     6661 gccgcagccg caccacagag ccttcggcgg cacgggcgga aagggtgaga tattcagtcg
     6721 gcgggagcca cacctggcct cgaggcgaga gcgccatcga gtcgatccac gcgctgccct
     6781 tcgcagccac gccggggaag taccgcagat cccgccgcac cggatacacc aggaccgacg
     6841 agtccgcagc caagcgcgcc tcgatgcgaa attgcatcaa cgtgtcaggc gggaacggaa
     6901 cccaggcgag ccatgcccca ttgcgccaaa cgcgcaccgg ggtgccgttg atgctcaatc
     6961 gtacgttgtt attcgccacg gagccgaaca agaagctcga atcgcgtact cgaaccagat
     7021 cggtgagcgc cggatagacc acggtcaggc caatgggatc gggcactctg ggcgccgcgg
     7081 gaagctccgc ccggctcatg ggcgagcccg aaggcacggc acctgacgcg gatgcggtgc
     7141 tggtgccggg cctggtgttc gactggtgtg agcagacgag agcggtgacg acaaacggca
     7201 gcgccatcct ggagaatcgg ccgacaagca tagttgcaag gtacatggtg gctaggactt
     7261 acgccaagac gacgttgacg ctcccgacgg cgctctctag attcgtcaga cctcgaacct
     7321 cgttggaccg gcggacggga cccggtgtga ctcattgctg gaggtgttac atctgcccga
     7381 ggagcgcgtg agcagcggtt cggtacgagt ctccgtcttc ggcaagactg accagggccg
     7441 cgcccgcgat cacaacgagg acacgttcct ggtggccgat ctgagcacgg gaaacgccag
     7501 cctgcaaccc gcagtccgca gccacgagat cggccctcgc ggctcgctct tcatggtagc
     7561 cgacggcatg ggcggagccg ccgccggcga gctggccagt gccatggccg ccgatctcat
     7621 ctaccgccac atgatcaccg cgtgggccag tgactcgacg ccgaatgccg cccgcttcgc
     7681 gttccggatg aaggaagcag tcgagcttgc caacgagcga atccactcct acgccaggga
     7741 gcatcccgag gtccgcggta tgggaacgac cgtgacggcg gcgggtgtct atgggagcga
     7801 tctctatctt acccagatcg gggacagccg ggcctacctg gtgcgggact cagaggccat
     7861 ccagctcacc aaggatcaga gcctcatgca gcgcctggtc gatgccggcg agctgaccga
     7921 agacgaagcc gagcagagcg agcgacgcaa tatcattctc caggccctgg gccccgatcc
     7981 gcgggtcaga gtcgacctca cccgtcagtc cctccggggc ggcgatacgc tgatcctgtg
     8041 ctcggatgga ctctcaggac tggttcggcg ggaggaattt gccgggctcg cgcgggagca
     8101 cgccgatctg gccgccctct gctcggcgct gatcgatctc gcgaacggac ggggtggtcc
     8161 ggataacatc acggtggtga cggcccggtt cgaaggtgag ggcttaccgg aagcgcacga
     8221 gacagacggt gttggctaca ccacctacca gcttccaccg ggcacgggcg agcatggcgc
     8281 ggacaccacc acagaaacgg agccgatcca gccacgtacc tcgaattcgt cctctacgct
     8341 cgagcacctc cgcagtctcg ggttcatcgt ggtgattctc ggcgtgctcc tgctcctgct
     8401 cgcagtgtgg cgctaagcgt tggccgcacc ccagagccgg tctgacgaac cagctttctc
     8461 ctcaccgctc aaagctcgcc tcgcctggat cgcggccctc gcgtttgctt ctggatttcc
     8521 ttttggcctt gtgaatgaga ccgtgccgat ctatttccgc acgcacggcg tcggactggt
     8581 cgagatcgga cagctgaata agctgagcct gccctggagc atcaagtggc tgtgggctcc
     8641 gctgattgat cggcacggca ccagacgtca gtggattgct ggctgtctgg cgggactcgc
     8701 cgccctcacc tttgcgctcg gcacgctcca gcccggcaaa ctcggcaccg gactctggat
     8761 aatcttggtc ctaatcgtcc tgctgtcggc aacgcaggat gtagcgatcg acgcctacac
     8821 catccagtcg actaccattc gcgagctggg ggtggcgaac tcggtgcgca tcaccctgta
     8881 ccgcgtcgcc atgctgaccg cgggtgggct gttggtgtgg ctggcaggac ggatcggatg
     8941 gtcggagagc ttctccgtgg ggtccgtggt cctcgcggcg cttgccctgt gtgccttcct
     9001 gctgccggcc gtggatcgtg cggcgggacg ggcggcgagt ctctgggagc cgctcaggga
     9061 gctgctttcc cggcccggca tcgtgaccgt ggtcatcttc gctctgatct tcaagctcga
     9121 catcgccgcc ttggagccga tgatgcgtcc cttctgggtg gaccgtggcc tgtcgctggc
     9181 ggaaattgga gcggtggtgg cctccggccg tttgatcgcc accattgccg gggcggccgc
     9241 aggcggcgtg ttcactaccc gctacgggat tttcaccggc ctatgggtgc tcggtctgat
     9301 ccaggcgtta tcggcgctgg tgtattgggc gactgccacg ttcgcgtcct ccaattcgct
     9361 cgtggtcctc gccgcctact tcgagagctt tgcggccggt cttggcacct ccgcctatct
     9421 ggcctttctc atgtcgatct gtgagaagcg ttacgcggcc acgcaattcg ccgtgctctc
     9481 tgcccttttg gcggtgactc gctacgtcgc cggcggatac tcgggtgggc tggccgagcg
     9541 gctcggttat ggcaactact tcctggtgac cttcttcctc ggcctcccgg cgttcctgct
     9601 catcccgcgc ctgcgccgcg cctcgcgcgc tggccgagcg ccggcttagc cgagcctctg
     9661 gcgtaaccac cgggcgaccg cttcctgcat cagccgctgg cggtgccagg ccagcagcac
     9721 tggggcctgg ctcggcagat cggccagcag gcgggggtgc ccgaacagca cgatcagatc
     9781 ggcgcccgac ccatgatgag acagagcctc acgagttcct gccccgaaac cggatcggcc
     9841 cttccacgcc ctaggctcgg cgaagaccag cacgaccctc gagccaccgg tgtagcggcc
     9901 gatcagctcg ggaccgagcg cccgatgggc gtagtcgctc ggacccggcg ggtaaggccc
     9961 accgacgtcg tcgtccacca cgatcaggtc gagcgggcca gtgagcgacg gtgccgtgcc
    10021 tcgggccatt ccctgcttca gcagagcatc cgccagcgcg tcagcggatt cgaagggccc
    10081 ccgagtgacc gggggagtcg gcgcggtcgc gatggcgagg gcccggtcgt agcgccgcag
    10141 agattcctcc agccgcgcct cggaaagcgt tccgctggaa agagccgcct gcaacgcgtc
    10201 ccgcacgcgg tgcggatcgt tggggtacag gagcaggtca gcgcccgcct ggatcgcctc
    10261 gactgcggca tcggactccc gccggccgag cagagcgccg tccatgatga gggcgtccgt
    10321 caccaccagc ccatcgaagc tggagcggtc gcgcagttct cctcccaaga gggtgcggga
    10381 cagcgtagcg ggcagccctg aggcatcgag gccggggtag gccacatggg cggtcatgat
    10441 cgaagcgacg ccgcattcga tcgccaccgt gaacggcagc aggtcggacg cgcggagcgc
    10501 cgcagccgat gcttccacga caggaagtgt gatgtgcgaa tccacggtgg tcctgccgtg
    10561 accggggtag tgcttggcgc aggcgagcgc cccggccgcc tggcagcctt ccacccagtg
    10621 cctcacgcag gtcgccacct ggttggcgtc cgcgccgaag gctcgggtct gcacgatggg
    10681 attgtcgggc agcacatcga ggtcggccac aggagcgaag acccagttga tccccaccgc
    10741 acgggcctct tgggcagtca cggaggcggc ccatcggacc accgcaggat cgcccagtga
    10801 ggcaagcgcc aggggagggg ggaactcggt gagtcccgcg atctgctggc cggcgccgcg
    10861 ctccaggtcc gaggcgagca acagcgagcg gccagccctg
//
LOCUS       DASYRV010000249         2504 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_308147, whole genome shotgun sequence.
ACCESSION   DASYRV010000249 DASYRV010000000
VERSION     DASYRV010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2504
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_308147"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1447
                     /locus_tag="VGQ24_06460"
     CDS             <1..1447
                     /locus_tag="VGQ24_06460"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HEV8454514.1"
                     /translation="EELEPDDLADEIDRTALLGEIRTTLLRLEHEQPNVRNPGFWLAH
                     LFQGLYAVLARSEPEPATRAPAVVARLNAAPAFLDGARATLEEPPAVFVDTAIGMLGG
                     GGELIAQMVGVFGRAAPDLSGELTKAGEAALRALVGFGAVLRDEIDRNPDPHAFAIGE
                     EQFTRRLYHEHALGSGPSELWRYGLHLQEEVTEEIVALARRLDGRPWRELVNELQDDT
                     PPDDQLLTVYRSELDSACEFVTDRDLVGVPEGRVDVVPTPAFLKALVPFAAYDPPPIH
                     LAQRTGRFYVTEPDPSQPPEIRARQRRGHCRHSIPAMVSHEAYPGHHLQLLTAQGLGS
                     EVRRHIWSPVMVEGWALYSEQLMDEIGFYRTDEARLFRLLNLLWRAIRVVLDVGLHTR
                     GMTPAEAVDYLVEHLPIERPSAEAEVRRYCAWPTYQLSYAVGRRELLRLRDAYRERDP
                     AGYSPRKFHDEVMRYGGLPVALARWGMDLAE"
     gene            1476..2465
                     /locus_tag="VGQ24_06465"
     CDS             1476..2465
                     /locus_tag="VGQ24_06465"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454515.1"
                     /translation="MKITVLTYLDSENENSKEYEAVVPQVAKALRSLGHRVSILGSHG
                     DVKRLIAGLSRRKPDLVFNLMEMFGENIFGDIPVAGLLDLLGLKYTGSGPGELYLSQD
                     KGLTKKLLAFEDILYPRFLVFSRGEAFETGGNLRMPLFVKPLRSDSSLGIGGKSLVHD
                     AVALMERVAYIRKELNDSALAEEYIEGREFFVGVLGNTQPKALPPVEVDFTGFPEGVP
                     KVLDSKAKWDERSKEYKGTKSVIANLPDELRAKLQKVAVDAYRALRVKDYGRVDLRLT
                     ETGEIYVLEVNASCYLEKSSEFAMAAAASGLDYPRLIERIVNLASERMEKKRR"
BASE COUNT          423 a          789 c          877 g          415 t
ORIGIN      
        1 ggaggagctc gaaccggacg atctcgccga cgagatcgat cgtaccgccc tgctggggga
       61 gattcgcacg acactccttc ggctggagca cgagcagccg aacgtgagaa atccgggctt
      121 ctggctcgcg cacctgtttc aggggcttta cgcggttctg gcccggagcg agccggaacc
      181 tgccacgcgg gccccggccg tggtggccag gctgaacgcc gcgccggcct ttctggacgg
      241 cgcccgcgcg accctggagg agccgccggc ggtctttgtg gacacggcca tcggcatgct
      301 tggcggcggc ggcgagctga ttgctcagat ggtgggtgtc tttggccgtg cggcaccgga
      361 cctgagtggt gagctcacga aggccgggga ggccgcgctc cgggccctgg tcgggttcgg
      421 cgccgtgctg cgcgacgaga tcgatcgaaa cccggatccc catgccttcg ccatcggtga
      481 ggagcagttc acccggcggc tctatcacga gcacgcgttg ggctcgggtc cctcggagct
      541 atggcggtac gggcttcacc ttcaggaaga ggtcaccgaa gagatcgtgg ccctggctcg
      601 gcgactcgac ggacggccgt ggcgcgagct ggtgaacgag ctgcaggatg atacgccacc
      661 ggacgatcag ctgctcaccg tgtatcgctc ggagctcgac tcggcgtgtg agttcgtgac
      721 cgaccgggac ctcgtcggcg tgccggaagg cagggtcgat gtcgtgccca caccggcttt
      781 cctcaaggcc ctcgtgccgt tcgcggcata tgacccgccg ccgatccatc tggcgcagcg
      841 cacgggccga ttctatgtga ccgagcccga cccgtcgcag ccgccggaga tccgggcacg
      901 tcaacgccgg ggccactgcc gccattccat ccccgcgatg gtgtcgcacg aggcataccc
      961 gggccatcac ctccagctgc tcaccgccca ggggctgggc tccgaggtgc ggcgccacat
     1021 ctggagcccg gtcatggtcg agggctgggc gctctactcc gagcagctca tggatgagat
     1081 cgggttctac cgcaccgacg aggcccggct gtttcgcctg ctgaacttgc tgtggcgggc
     1141 catccgggtg gtgctcgacg tggggcttca cacgcgcggc atgacgccgg cggaggccgt
     1201 ggattatctg gtcgagcact tgccgatcga acggcccagc gccgaggccg aggtccggcg
     1261 gtattgcgcc tggccgacat accaactctc gtacgcggtt ggccggcgcg agctgctgcg
     1321 gctccgggac gcataccgcg agcgggaccc ggccggctac tcgccgcgaa agttccacga
     1381 tgaggtaatg agatatggag gattacccgt agcgttggcg cgctggggca tggatctcgc
     1441 cgagtgaacg gccggaaccg gaaaggaccg accgcatgaa gatcaccgtc ctgacctatc
     1501 tcgacagcga aaacgagaac tccaaggagt acgaagcggt cgtgccgcag gtggccaagg
     1561 cgctgcggag cctggggcat cgggtgtcga ttctcggctc gcatggagac gtcaagcgtc
     1621 tgatcgcggg cctctcgcgc cgaaagccgg acctcgtctt caacctcatg gagatgttcg
     1681 gggagaatat cttcggtgac attccggtgg ctggactgct cgacctcctg ggcctcaagt
     1741 acaccggcag cggtccgggc gagctctatc tcagccagga caagggactc accaagaagc
     1801 ttctggcgtt cgaggacatt ctctatcccc gcttcctggt cttctcccgg ggggaggcgt
     1861 tcgagaccgg gggcaatctc cggatgccgc tgttcgtcaa accgctccgc tccgactcgt
     1921 cgctcgggat cggcggcaag tcgctggtgc atgatgcggt ggccttgatg gagcgggtgg
     1981 cgtacatccg gaaggagctc aacgactcgg ccctggcgga ggaatacatc gagggccgtg
     2041 agttcttcgt gggagtgttg gggaataccc agcccaaggc gttgcccccg gtcgaggtcg
     2101 acttcaccgg ctttcccgag ggcgtcccca aggtgctcga cagcaaggcc aagtgggacg
     2161 agcgcagcaa ggagtacaag ggaaccaagt cggtgatcgc caaccttccc gacgagctcc
     2221 gggccaagct ccagaaggtg gcggtcgacg cctaccgcgc gctccgggtg aaggactacg
     2281 gccgcgtgga cctccggctc accgagaccg gcgagatcta cgtgctcgag gtgaacgcga
     2341 gctgctacct ggagaagtcg agcgagttcg ccatggcggc cgccgcgagc gggctcgact
     2401 acccccggct gatcgagcgg atcgtgaacc tggcgtcgga gcggatggag aagaagcggc
     2461 ggtagtcgcc gggagacgaa gcggccgggg ctctacggca aata
//
LOCUS       DASYRV010000250         6588 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_513844, whole genome shotgun sequence.
ACCESSION   DASYRV010000250 DASYRV010000000
VERSION     DASYRV010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6588
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_513844"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..870
                     /locus_tag="VGQ24_06470"
     CDS             <1..870
                     /locus_tag="VGQ24_06470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HEV8454516.1"
                     /translation="AAARPFVTHHHALDMPLYLRIADELYLKRLLVGGLERVYEIGHD
                     FRNEGMDRTHNPEFTMLEVYQAYADYGDMMDLTEDMVSAVVEHSLGTRVIERYGTTLD
                     FTPPFPRVSFLQGVQSRTGLDLRTAKDEQMRAVLLGIGGDAAAVNLLSGGRLQDEVFK
                     TFVEPHLVQPTFVVDYPKALSPLAKEHRSDPTLTERFELFVGGRELANAFSELNDPDD
                     QRRRFEDQVRQRVLGDEEAHSFDADFIRALEYGMPPAGGLGLGIDRLMMVIADQASIR
                     DVIIFPALRPEGT"
     gene            867..2174
                     /locus_tag="VGQ24_06475"
     CDS             867..2174
                     /locus_tag="VGQ24_06475"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEV8454517.1"
                     /translation="MTTGQLGRYWRELKASIRWPSRLEWRIARRYLRSRRNSRTASLN
                     TVISTGGVAVGVTALIVVLGVMNGLRDDLRERILVANPHLRVLTFGSGLRLDDWQSVI
                     AQVRKEPGVIAAAPEVISQAGITAGQDYGEGVNLVGFDPDTGTMSVTSLPGAITKGDL
                     SFKTDKPGVDGGILLGSRLASRLSVYPGDVVTLVPVTQAKVNPALGVAVPRFWKFEVT
                     GLFDTGMFQYDNQFVVLSRETAQRFTGLGNAVSGIAVRVDDPERAPAIGAALEKRLGY
                     PYRALDWQTQNSSLFSALQLEKLAMGLIIFFIMVVAAFNIVGTLTMVVTDKTREIGIL
                     RAMGLTPAAVGRVFLVQGAVIGGVGTALGLVLGLSVAYVVDRSGWVRINPAVYFIDHL
                     PVHMEWVDVGIVVLASLAIAVCATLYPSRSAAALTPVDAIRHE"
     gene            2171..2872
                     /locus_tag="VGQ24_06480"
     CDS             2171..2872
                     /locus_tag="VGQ24_06480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEV8454518.1"
                     /translation="MTAILQAQALRKVYRGGDGNPIEVLSGVDLTVSRGEFVAIVGAS
                     GSGKSTLLHLLGALDTPSGGTVRLAGQAYESESPEALAQIRNRKLGFVFQFHHLLREF
                     TALENVMMPLLIAGEDDARARSRAEELLAAVGLAGRMSHRPSQLSGGEQQRAAVARAL
                     AADPLVVLADEPSGNLDSGNSERLHQLFAHLSREFETALVVVTHNRLLAARADRVLSL
                     EGGRLVPLSGVESMP"
     gene            2872..3360
                     /locus_tag="VGQ24_06485"
     CDS             2872..3360
                     /locus_tag="VGQ24_06485"
                     /inference="COORDINATES: protein motif:HMM:NF014232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrB/UvrC motif-containing protein"
                     /protein_id="HEV8454519.1"
                     /translation="MSCEQCREREAVIHLTQIVNEQVTTLHLCERCAAEKGVESPGAQ
                     PKTPLGTFLAAMGQEPEQAQAPRADTCSRCGGSLADFRESGRLGCPDCYRSFEVPLRD
                     LLRRLHGSTHHMGERYAERGTTAPAERQQTSELREQLRLAVETENFELAAELRDRLRV
                     LE"
     gene            3357..4439
                     /locus_tag="VGQ24_06490"
     CDS             3357..4439
                     /locus_tag="VGQ24_06490"
                     /inference="COORDINATES: protein motif:HMM:NF012443.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein arginine kinase"
                     /protein_id="HEV8454520.1"
                     /translation="MIDLSLLTDGGVGWLDASGPSSHLVLSTRIRLARNLAGRVFQGR
                     NSETEREDILQVVEAAARDTVLLRRATKFRLDRLDRADRQLLHERHLVSKELAGLDAD
                     GRVRSGASLLVQDRLGVMLNEEDHLRLQGLHSGFALDAAYAEVDRLDAELGQRLAFAF
                     HSEFGYLTSCPTNVGTGLRASVLIHLPGLVLTKEISKVLQGLAQVGLTFRGLYGEGSE
                     VVGNFFQLSNQTTLGSSEYELLDHLGKMVRQVMDYEEQARQVLLRDAPAIIEDKVWRA
                     YGLLRYARALSFEEAMNLLSGVRLGVGVSLIPDVGMYTLNKLLVYTQPAHLAVAEGLG
                     PSDPDLPVRRAQFVRKVLESEVGRRG"
     gene            4479..>6588
                     /locus_tag="VGQ24_06495"
     CDS             4479..>6588
                     /locus_tag="VGQ24_06495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HEV8454521.1"
                     /translation="MNGYNFTDRVRKVLQMAREEAARLHHEYVGTEHILLGLIREGEG
                     VAAAVLTNLNVDLEDIQQKIEETVKKGKAAAAAGPDLPYTSRAKKVLELAMTEARELN
                     HSYVGTEHLLLGLLREEKGIAAQVLTDAGVNLEQSRAETLRLLGSDMPQASAGSGSSQ
                     PASTPKSEKKSKTPALDHFCRDLTQLGAEGQLDPTIGRGKEIERVMEILARRKKNNPV
                     LIGEPGVGKTAIVEGLALLIANGLCPDVLRDHRVLSLDMAAVIAGTKYRGQFEERLKA
                     VMNEIAQNKQIILFIDELHTLVGAGAAEGAIDASNMLKPALARGELQCVGASTLNEYR
                     KYIEKDGALERRFQTVVVEPPTVVETIDILKGLRKKYEDHHRISIPDATLTAAAELSE
                     RYITDRFLPDKAIDVIDEAGARARLASQVPPAEVAELKAALEKVNVQKEDAVRDQNFE
                     RAASLRDQERDLQNQIRLKQEEWERERQTKRPVIDEEAIAFIVSRWTGIPVTRLQEAE
                     TARLMRMEDELHGSVVGQDEAIRAVSRAIRRSRAGLKDPNRPIGSFIFSGPTGVGKTE
                     LARSLAKFLFADASALIRVDMSEYMEKFSVSRLIGAPPGYVGYEDSGTLTKAVRRKPY
                     SVVLLDEIEKAHPDVFNILLQVLDEGHLTDNYGRVIDFKNTVVIMTSNVGARDIMKGK
                     ALGFHGGDARGSFEKMQETVK"
BASE COUNT         1176 a         2004 c         2243 g         1165 t
ORIGIN      
        1 gccgcagctc gaccattcgt cacccaccat cacgcgctgg acatgccgct ctatctccgg
       61 atcgctgacg agctgtatct caagcggctc ctggtgggcg ggctggaacg ggtgtacgag
      121 atcggtcacg acttcaggaa cgagggaatg gatcgaactc ataacccgga attcaccatg
      181 ctcgaggtgt atcaggcgta tgccgattac ggcgacatga tggatctcac cgaggacatg
      241 gtttcggctg tggtggaaca ctccctgggc accagggtga tcgagcggta cggaaccact
      301 ctcgatttca ctccgccgtt tccccgagtg tccttcctcc agggggtgca gtcgaggaca
      361 ggcctggatc tacgtacggc aaaggacgag cagatgcgtg cggtgctgct cggaatcgga
      421 ggagacgcgg cggcggtaaa cctcctgtcc gggggccgcc tccaggacga ggtcttcaag
      481 acattcgtgg agccgcatct ggtgcagccg accttcgtgg tggattaccc caaggcgctc
      541 tcgcccctgg ccaaggagca ccgcagcgat cctactctga ccgagcggtt cgagctgttc
      601 gtgggcgggc gggagctggc caatgcattc agtgagctca acgatccgga cgatcagcgc
      661 cgtcgcttcg aggaccaggt gcggcaacgg gtcctgggcg acgaggaggc ccacagcttc
      721 gatgccgact tcatccgggc gctggaatat ggaatgccgc ccgccggggg actcggcctg
      781 ggcatcgacc ggctcatgat ggtcatcgcc gaccaggcct cgatccggga cgtgatcatc
      841 tttcccgccc tgcgcccgga ggggacgtga caacggggca gcttggccgg tactggcggg
      901 agctgaaagc gagcatacgc tggccctcga ggctggagtg gcggatcgca cggcgctatt
      961 tgcggagccg ccggaactcc cggaccgcct cgttgaacac ggtcatctcc actggcgggg
     1021 tggcggtcgg cgtcaccgct ctcatcgtgg tgcttggggt gatgaacggg ctgcgggacg
     1081 acctccgcga acggatcctg gtggccaatc cgcatctgcg ggtgctgacg ttcggatcgg
     1141 gactccggct cgacgactgg caaagcgtga ttgcccaggt gcggaaggag ccgggtgtca
     1201 tcgccgcggc ccctgaggtg atcagtcagg cggggatcac cgccggtcaa gattacggcg
     1261 agggcgtcaa cttggtcggc ttcgacccgg acaccggtac gatgtccgtc acctctctgc
     1321 cgggggcaat caccaaaggc gatctgtcgt tcaagaccga caagcctgga gtggacggtg
     1381 gtattctgct gggctcccgc cttgcctccc gactctcggt ctacccgggc gatgtcgtca
     1441 ccctggtgcc ggtgacccag gccaaggtca acccggccct gggcgtggcc gtcccacgat
     1501 tctggaaatt cgaggtcacc gggctgttcg acaccggcat gttccagtat gacaaccaat
     1561 ttgtcgtgct ctcgcgagag actgcgcagc gcttcaccgg cctgggaaat gctgtatccg
     1621 gtattgcggt gcgggtggat gaccccgagc gggcgcccgc catcggggct gctctcgaga
     1681 aacggctcgg ctacccctat cgtgccctgg attggcagac ccaaaactcg agtctcttca
     1741 gcgcgctcca gctggaaaag ctggccatgg ggctgattat ctttttcatc atggtcgtcg
     1801 ccgcgttcaa catcgtgggg acactgacca tggtcgtcac cgataagact cgggagatcg
     1861 gcattcttcg cgcgatggga ctgaccccgg ccgcggtggg gagggtcttt ctggtgcagg
     1921 gcgccgtgat cggcggggtg gggacggcgc tgggactggt actcggtctc tccgtggcct
     1981 acgtggtgga tcgctcgggg tgggtacgga tcaacccggc ggtatatttc atcgatcacc
     2041 ttcctgtgca catggagtgg gtggacgtgg gcatcgtggt gctcgcgagc cttgccatcg
     2101 cggtgtgcgc gacgctgtac ccctcgcggt ctgccgccgc gctgactccc gtcgacgcga
     2161 tccgccacga atgacggcga tcctccaggc tcaggccctg cgcaaggtct atcgcggggg
     2221 cgacggcaac ccgatagaag tcctctccgg cgtcgatctc acggtgagcc ggggcgagtt
     2281 cgtggcgatc gtgggggcca gcggctcggg aaagagtacg ctcctccact tgctcggagc
     2341 cctcgacaca ccgtccggtg gtacggtgcg attggccggg caggcgtacg agagcgagag
     2401 tcccgaggct ctggctcaaa tccgaaaccg aaagctgggg tttgtcttcc agttccatca
     2461 tttgctccgg gaattcaccg cgctcgagaa tgtgatgatg ccgttgctga ttgcgggtga
     2521 ggatgatgcc cgggcccgct cccgggcgga ggagctgctc gcggcggtgg gactggcggg
     2581 ccggatgtcg caccgaccct cgcagctgtc gggaggcgag cagcagcgcg cggcggtggc
     2641 cagggcgctc gcggccgatc cgctggtcgt tctggcggat gagccttcgg gcaacctcga
     2701 ctctggcaac agcgagcgac tgcaccagct gttcgcgcat ctatcccgcg agtttgagac
     2761 ggcgctggtg gtggtcaccc ataatcgcct gctggcggcc agggccgacc gcgtgctgtc
     2821 cctcgagggc ggccggctgg tgccgttgtc gggcgtggag tccatgccct gatgtcgtgt
     2881 gagcagtgcc gggagcgcga ggcggtcatt cacctcaccc agatcgtaaa cgagcaggtc
     2941 accaccctgc atctctgcga gcggtgcgcc gcggagaagg gggtagagag tccgggcgcg
     3001 caacccaaga cgcctttggg caccttcctc gccgcgatgg gccaggagcc ggaacaagcc
     3061 caggccccac gagcggacac gtgctctcgg tgcggtggct cgctcgcgga tttccgggag
     3121 agcggccgat tgggatgccc tgactgctac cgttcattcg aggtgccatt gcgggatctg
     3181 cttcgtcggc ttcatggctc cacccaccac atgggcgaac gctacgctga acgtggcacg
     3241 acggcgccgg ccgagcgcca acagacgtct gagttgaggg aacagcttcg gctggcagtg
     3301 gagaccgaga acttcgagct ggcggcggag ctgcgagacc gccttcgggt gctggaatga
     3361 tcgatctgag cttattgacg gacggcggcg tggggtggct ggacgcgagc gggccatcca
     3421 gccacctcgt gctttcgacc cgcatccgcc tggcccggaa tctggcaggc cgggtgtttc
     3481 aggggcggaa ttccgagacc gagcgcgagg acattcttca agtcgtcgag gcggcggcac
     3541 gggacaccgt gttacttcga cgcgcgacca agtttcggct ggatcggctg gaccgtgccg
     3601 accggcagct gctccacgag cgacacctgg tcagcaagga gctcgccggc ctggacgcgg
     3661 atggccgggt tcgatcgggc gcgtcgctgt tggtccagga ccggctcgga gtgatgctga
     3721 acgaggagga tcatctccgg ctccaggggc tccattccgg cttcgcgctg gacgcggcgt
     3781 atgccgaggt ggatcggctc gacgccgaac tgggacaacg acttgcattc gcatttcatt
     3841 ctgagtttgg ttaccttacg tcgtgtccga ccaacgtcgg caccgggctt cgggcctcgg
     3901 ttttgataca cctccccggg ctcgtgctga ccaaggaaat ttccaaggtg ttgcagggtc
     3961 tggcgcaggt gggactgact ttccgcggcc tgtatggtga gggaagcgaa gtcgtcggca
     4021 attttttcca actgtcaaat cagaccacac tcggaagctc cgaatacgag ctgctcgatc
     4081 accttggcaa gatggtccgg caggtcatgg actacgaaga gcaggcccgg caggttctgc
     4141 tgcgtgacgc tccggcaatc atcgaggaca aagtctggcg cgcgtacggg ttgcttcgtt
     4201 atgcacgggc tctgtcgttc gaagaggcaa tgaacttgtt gagcggcgtg cgcctcggcg
     4261 taggggtgag cctcatcccc gatgtcggca tgtatacgct taacaagttg ttggtataca
     4321 cccagccggc ccatctggcg gtggccgaag ggctcggccc gagcgatccc gacctgccgg
     4381 ttcggcgggc acaattcgtg cgcaaagtgt tggaatccga agtgggacgc cgtggatgag
     4441 ccgcgacgac ggccttcgga gctacgcagg atacctcgat gaacggctac aactttactg
     4501 atcgtgtgcg taaagtcctg cagatggccc gcgaagaggc ggcccgtctg catcacgaat
     4561 acgtggggac ggagcacatc ctcctcggcc tcattcggga aggcgagggc gtggcggcgg
     4621 cagtcctcac caacctgaac gtcgatctcg aagacatcca gcagaagatc gaggaaacgg
     4681 tcaagaaggg caaagcggcc gcggccgccg ggcccgatct gccgtacacc tcgcgggcca
     4741 agaaggtgct cgagctggct atgaccgagg cgcgagagct gaaccactcc tacgtcggga
     4801 ccgagcacct gctgctcggc ttgctgcgcg aggagaaagg catcgcggcc caggtgttga
     4861 cggatgccgg cgtgaacctc gagcaatcgc gggccgagac cctgcgcctg ctcgggagcg
     4921 acatgcctca ggcgtcggcc ggcagcggca gcagccagcc cgcatctacg ccgaagtccg
     4981 agaagaaatc gaaaacgccg gcgctcgacc acttctgccg cgatcttacg cagctcggcg
     5041 cggaaggcca gctcgatccg acgatcggac ggggcaagga gatcgagcgg gtcatggaga
     5101 tcctggcgcg gcgcaagaag aacaatccgg tcctcatcgg tgagcctggc gtcggcaaga
     5161 cggccattgt cgaaggtctg gcactgctca ttgccaacgg gctctgccct gacgtgttgc
     5221 gggatcatcg cgtcctgtcg ctcgacatgg cggcagttat cgccggcacc aagtaccggg
     5281 gccagttcga ggagcggctc aaggcggtca tgaacgagat cgcccagaac aagcagatca
     5341 tcctgttcat cgacgagctg cacacgctgg tgggcgccgg cgccgccgaa ggcgccattg
     5401 atgcctcgaa catgctgaag cccgccctcg cccgcggcga gctgcagtgc gtcggcgcct
     5461 cgaccctcaa cgagtaccgc aagtacatcg agaaagacgg cgccctggaa cggcggttcc
     5521 agaccgtcgt ggtggagccg ccgacggtgg tcgagaccat cgacatactc aagggacttc
     5581 gcaaaaagta cgaggaccac caccggatca gcattcccga tgccacgttg accgccgcgg
     5641 ccgagctttc cgagcggtat atcaccgacc ggttcctgcc ggacaaagcg atcgacgtga
     5701 tcgacgaggc cggcgcccgg gcccgactgg cctcgcaggt tcccccggcc gaggtggccg
     5761 agctgaaggc cgctctggag aaggtgaacg tgcagaagga agatgcggtc cgcgatcaga
     5821 acttcgagcg cgccgcctcg ctccgggacc aggagcgcga cctgcagaac cagatccggc
     5881 tcaagcagga ggaatgggag cgtgagcggc agaccaaacg gccggtgatc gatgaggagg
     5941 ccatcgcgtt catcgtatcc cggtggaccg gcattccggt cacccggctc caggaagccg
     6001 agaccgcccg gctgatgcgg atggaagacg agctgcacgg atcggtggta ggccaggacg
     6061 aggccatcag ggcggtgtcc cgggccatcc ggcgctcccg cgccggactc aaggatccga
     6121 accggcccat cggttccttc attttctccg ggccgaccgg ggtggggaaa acggagttgg
     6181 cgcgttccct ggccaagttc ctcttcgccg atgcgtcggc gctgatccgg gtcgacatgt
     6241 ccgagtacat ggagaagttc tcggtttctc gactcatcgg cgcgcctccg ggctacgtcg
     6301 gctacgagga ttccgggacc ctgaccaagg ccgtgcgccg gaagccgtat tcggtggtcc
     6361 tgctcgacga gatcgagaag gctcatccgg atgtgtttaa catcctgctc caggtgctgg
     6421 acgaaggcca tttgaccgac aactacgggc gggtcatcga cttcaagaac acggtcgtga
     6481 tcatgacctc gaacgtcggc gcccgtgaca tcatgaaggg caaggcgctc ggattccacg
     6541 ggggcgacgc gcggggaagc ttcgagaaga tgcaggagac ggtcaagg
//
LOCUS       DASYRV010000251         3792 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1761208, whole genome shotgun sequence.
ACCESSION   DASYRV010000251 DASYRV010000000
VERSION     DASYRV010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3792
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1761208"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(160..1053)
                     /locus_tag="VGQ24_06500"
     CDS             complement(160..1053)
                     /locus_tag="VGQ24_06500"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEV8454522.1"
                     /translation="MRLGMRWKIVLAFLAVYLCWGMTYLAMRVAVRDIPPHLMSGARF
                     LVAGLVLYLWTRRRGDPRPTATQWRAAAIVGAFLLLGGNATVAWAEQQVPSGLAAVLI
                     AVAPIWMVAFEWARGGPRPGKRVVAGLILGLAGVALLVSPKGDSTTQVNLIGAVMLVL
                     ASASWAWGSVVSKSAPLPKSPFLATSMEMIAGGVLLLLTALAAGQFTHFSPTQISADA
                     VLAWLFLVVFGSLVGFTAYIWLLGVTSIAKAGTYAYVNPIVAVFLGWAILDEPVTGRT
                     LIAALVILVGVALVNLEWKTN"
     gene            complement(1205..2416)
                     /locus_tag="VGQ24_06505"
     CDS             complement(1205..2416)
                     /locus_tag="VGQ24_06505"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEV8454523.1"
                     /translation="MFLSRRDFMLGSTGLVVSAVRTGAAWPTQALPVASGPRWQPSAD
                     LLRNLPRLLELASVPGLAVALVEGSRVWTRGFGDAVQEPHQPVSDQTEFEAASLGKPV
                     FACAILRLVDAKILDLDRPLFDYLPTPEANNTRMKRVTPRHVLSHTTGLPNWRQQPGP
                     LEPTSDPGKTFSYSGEAYFYLQRVVETVTGKPFARVMREQVLDPLGMKDTSYVWLPAF
                     ESRMAAGYDGQENRLDVQAAIGRRTLAIAEQWGTPLIDWRYDEAARAVPLINPGWPPL
                     PLYMVPNAATSMLTTVSDYARFLTRLVAPASAPGLNLSPAGRRAMATPQVRLNSALWW
                     GLGWGLQRDEHGDVLWHWGANNSFRNFVIADPTNHRAVVVFTNSENGPRVYERVIVAV
                     TGHDHPAFLWI"
     gene            2607..3506
                     /locus_tag="VGQ24_06510"
     CDS             2607..3506
                     /locus_tag="VGQ24_06510"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEV8454524.1"
                     /translation="MDSPIANPRSGGRAQLPSDTHIGRVRLRVGDLERSLRFYRDVLG
                     LGIAREEGSKVALAPRSSPRELILLEERPGIRRRPSRPVMTGLYHVALLVPSRAELGR
                     ALLGLNQAQYPLRGMSDHAVSESLYLDDPDGNGLEIYADRPRAQWPIRDGVVQMTVDP
                     MDVEGVISAAQPVSLPWRGLPAGTVVGHVHFTVSDLERAVRFYRNVIGFDMMMRVPSL
                     AAVSAGGYHHHLNLNTWAGEGAPPDSDQVAGLAGWELRVPDARARRDLIDRLAGAGAL
                     TGSPSGAAARDPDAIPIDIEEAP"
     gene            complement(3503..>3792)
                     /locus_tag="VGQ24_06515"
     CDS             complement(3503..>3792)
                     /locus_tag="VGQ24_06515"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEV8454525.1"
                     /translation="RNGEVRIGLIHRNGRARFSVTDQGPGIAAEYRERIFEKFGQVPT
                     SGSAGARSSGLGLTFCKLAVEAHCGEIGVETAETGGSRFWVELPRPQTKGS"
BASE COUNT          691 a         1253 c         1222 g          626 t
ORIGIN      
        1 tctcccagct catcacgctc tatatcaccc cggtggtcta tacctatctc gatgcctggc
       61 agcagcggct cgctcgagga aaggccaagg agccgaaaga attccgcgag ccggccaggg
      121 gaaaggcggc cgcagcagag gcaacctgat gcggcaacat caattcgtct tccattcgag
      181 attgaccagc gccacgccga ccagaatgac cagcgccgcg atcagcgtcc tgccggtcac
      241 gggctcatcg aggatcgccc aaccgaggaa gaccgccacg atcggattga cgtaggcgta
      301 ggtgcccgcc ttggcgatcg aggtgactcc gagcagccag atgtacgccg taaagcccac
      361 cagtgatcca aagaccacga gaaacaacca ggccagcacg gcgtcggccg atatctgcgt
      421 tgggctgaag tgcgtaaact gtcccgccgc cagcgcggtg agcagcagga gaacaccacc
      481 cgcgatcatt tccatgctgg tagcgaggaa cggcgacttc gggagtggtg ccgacttcga
      541 gacgaccgat ccccacgccc atgaggcgga cgcgagcacc agcattacgg caccgatcag
      601 gttgacttga gtggtggagt cgcccttggg cgacaccaga agagccacac ccgccaggcc
      661 gaggatcagt ccggcgacca cccgctttcc cggtcgcggc ccacctctgg cccactcgaa
      721 tgcaaccatc cagatcggag ccaccgcgat gagcacggcc gcaagcccgg aaggcacctg
      781 ctgttccgcc caggccaccg tcgcattccc accaagcagc aggaaggcgc cgactatggc
      841 agcggcccgc cactgggtcg cggtaggcct ggggtcgccg cgccggcggg tccataggta
      901 gagcaccaga ccggcaacca ggaaccgcgc tcccgacatg agatgcgggg gaatgtcccg
      961 caccgcgact cgcatggcca gataggtcat gccccagcac aggtacacgg ccaggaaggc
     1021 gagcacgatt ttccaacgca tgccgaggcg cacggtgctc cctcgctgtg gacgagcgct
     1081 caagtaaaca cctattcctc atcctgagcg aagcgaagga cctattcagc ggcttactgg
     1141 agtcagctga ctaggtccct cgctgcgctc gggatgagga gaagatagaa cttgggattc
     1201 tcgcttaaat ccagaggaag gccgggtgat cgtgacccgt caccgccacg atgacacgtt
     1261 catagacgcg gggtccgttc tcgctgttgg tgaacacgac gacggccctg tggttggttg
     1321 gatcggcaat cacgaagtta cggaacgagt tattggcacc ccaatgccag agcacatcgc
     1381 cgtgctcgtc ccgctggagc ccccagccca gtccccacca gagagcgctg ttcaaccgga
     1441 cctgcggcgt cgccatcgcg cgccggccgg ctgggctgag attcaggccg ggcgcactgg
     1501 ccggggctac cagcctggtc aggaacctgg catagtcgct cacggtcgtg agcatcgagg
     1561 ttgctgcatt gggcaccatg tacagcggga gcggcggcca ccccgggttg atcaacggca
     1621 ccgcccgggc ggcctcgtca tagcgccagt cgatcagcgg agtgccccac tgttctgcga
     1681 tggcaagtgt tcgccggccg attgccgctt gcacgtcgag ccggttctcc tgtccatcgt
     1741 atccggccgc catgcgcgat tcgaatgcgg gcagccagac gtagctggtg tccttcatgc
     1801 cgagcggatc gagcacctgt tctcgcatga cccgggcgaa gggcttgcca gtgactgtct
     1861 ccaccacgcg ctggaggtag aagtacgcct cgccggagta gctgaatgtc tttcccggat
     1921 cgctcgtcgg ctccaacggg cccggctgct gccgccagtt ggggaggcct gtcgtatgac
     1981 tgagaacgtg gcggggagta acccgcttca ttctggtgtt gttggcttct ggtgtgggga
     2041 gataatcgaa cagggggcga tcgagatcga gaatcttggc atctaccagc cggaggatgg
     2101 cgcaggcgaa gaccggctta ccgagcgagg cggcctcgaa ctctgtctgg tccgaaaccg
     2161 gctgatgcgg ctcttgcacc gcgtcgccga atccgcgggt ccagactcgg ctgccctcca
     2221 cgagcgccac ggcgagtccg gggaccgagg ccagctccag cagccggggc agattccgca
     2281 gcaggtcggc gctgggctgc cagcgcgggc cgctggccac cggcagagcc tgtgtgggcc
     2341 aggcggcccc ggtacgcacg gcagacacca cgagacccgt gctccccagc atgaaatcgc
     2401 gacggctcaa gaacatcact gaagcctcga cccttcaggt cggctggcgg ccctcgcgtt
     2461 ccgaagggca ccggacagga ccctacgtag gatggggcga tgcgtttcgg cggagccacg
     2521 ccaccggccg gcgcgaccgt ctcttggtag atactccctg aaggaaaagg gttgcgtgga
     2581 gcggaacgga cacccactta tcagctatgg attctccgat cgcaaaccca cggtccggcg
     2641 gcagggcgca gcttccgtct gacacccaca tcggccgcgt tcggcttcgg gtaggcgacc
     2701 tcgagcggtc gctgcggttc tatcgcgacg tcctcggtct tggcatcgcc cgggaggagg
     2761 gttccaaggt tgccctcgca ccgcgctcga gcccacgcga gctgattctg ctcgaggaga
     2821 ggcccggcat tcggcgccgc ccatcccgac cggttatgac cggcctgtac cacgtcgctc
     2881 tcctcgtgcc cagccgggcg gagctgggcc gcgcgctcct gggcctgaac caggcccagt
     2941 atcccttgcg cgggatgtcc gatcatgcgg tcagcgaatc gctgtatctc gacgatcccg
     3001 acggaaatgg gctcgagatt tatgccgacc ggccccgggc gcagtggccc atccgcgatg
     3061 gcgtggtgca gatgacagtg gacccgatgg atgtcgaagg cgtgatatcc gctgctcagc
     3121 cggtctcgct tccctggcgc gggcttccgg ccgggaccgt ggtcgggcac gtgcacttca
     3181 cggtgtcaga cctggagcgc gcggtgaggt tttaccggaa cgtgatcggc ttcgatatga
     3241 tgatgcgggt gccatcgttg gcggcggtgt ccgcgggtgg ctatcaccac cacctcaacc
     3301 tgaacacctg ggcgggagag ggagcccctc ccgactcgga tcaggtcgcg gggctcgcgg
     3361 gttgggagtt gcgcgtgccc gacgcccgtg cgagacggga cctcatcgat cggcttgccg
     3421 gcgcgggtgc gctcaccgga tctcccagtg gcgccgcagc cagagatcca gacgccatcc
     3481 cgatcgacat cgaagaggcc ccctaggacc cttttgtctg tgggcgaggg agctcaaccc
     3541 agaaacgaga ccctccggtt tcggcggtct cgacccctat ctcaccacag tgcgcctcga
     3601 ccgccagctt gcagaaggtg aggccgaggc cgctcgaacg cgcaccggcc gatccgctcg
     3661 tcggaacctg cccaaatttc tcgaagatcc gttcccggta ctccgctgca atccccggtc
     3721 cctgatcggt gacgctgaag cgtgcccgcc cgttgcgatg gatcaggccg atgcgcacct
     3781 ccccattgcg cc
//
LOCUS       DASYRV010000252         1747 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1089316, whole genome shotgun sequence.
ACCESSION   DASYRV010000252 DASYRV010000000
VERSION     DASYRV010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1747
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1089316"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..856)
                     /locus_tag="VGQ24_06520"
     CDS             complement(<1..856)
                     /locus_tag="VGQ24_06520"
                     /inference="COORDINATES: protein motif:HMM:NF013123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DPP IV N-terminal domain-containing protein"
                     /protein_id="HEV8454526.1"
                     /translation="MSCPRPLLWTVALLLSLAPRLEAQGTDPSVLTLERIFESKEFAP
                     EQLGRVRWLEKDAAYVKLEADSTTPGGRSLVRYDAATGKRQVWVPAARLVPPGDSMAL
                     TVEDYSLSPDKRRLLVFTNSEKVWRQNTRGDFWSLDLSSWQLRKLGGAAAKPSTLMFA
                     KFSPDGGRIAYVREHNLYVEDLGTGAITQLTRDGSRTIINGTFDWVYEEELNLRDGFR
                     WSPDGARIAYWQLDASGVRDFLLINNIDSLYSFTVPVQYPKAGTTNSAARVGVVSAGG
                     GATVWLDVP"
     gene            complement(1013..1444)
                     /locus_tag="VGQ24_06525"
                     /pseudo
     CDS             complement(1013..1444)
                     /locus_tag="VGQ24_06525"
                     /inference="COORDINATES: protein motif:HMM:NF012976.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          314 a          528 c          593 g          312 t
ORIGIN      
        1 ccggcacatc cagccacaca gtggcgcctc ccccggcact gacgaccccg actcgggcgg
       61 ctgagttggt ggttccggcc ttcgggtatt gcaccggtac ggtaaacgag tagagcgagt
      121 cgatgttgtt gatgaggaga aagtctcgca cgccggacgc gtcgagctgc cagtaggcaa
      181 tccgggcacc atccgggctc caacggaacc cgtcgcgcag gttcagctcc tcctcgtaga
      241 cccagtcgaa ggtgccgttg atgatggtgc gggatccgtc ccgggtcagc tgggtgatgg
      301 ccccggtgcc gagatcctcg acgtacaggt tgtgctcccg cacataggca atccgtcccc
      361 cgtcagggga gaatttggcg aacatgaggg tcgagggctt tgccgcggcg ccgccgagct
      421 tccggagctg ccagctggac aggtcgaggg accagaagtc cccccgggtg ttctggcgcc
      481 acactttttc cgagttggtg aagaccagga gccgccgctt gtcgggcgag aggctgtagt
      541 cctcgacggt gagcgccatt gaatcgccgg gcggtaccag ccgggccgcc ggcacccaga
      601 cctggcgctt tccggtggcg gcatcgtagc ggacgagcga ccggcctccg ggcgtggtgc
      661 tgtctgcctc cagcttgaca taggccgcat ccttctcgag ccaccgcacc cggcccaact
      721 gctccggggc gaactccttc gattcgaaga tccgctcgag ggtgaggacc gagggatcgg
      781 ttccctgggc ctcaagtcga ggagcgagcg acagaaggag ggcgacggtc cagagaagcg
      841 gacgcgggca agacatgaaa cgctccggaa tgagggggct tgtcgtcctg atcagtgcgg
      901 tagacgggcg tggctggctt ctggtttcaa tatggctggg ctgtgcgcga atcaggaagg
      961 ttcccaggcc ggccttggct cacccggcga aatagcgagg ctcgcatgct actcaggcgt
     1021 tgtccagcgc gatgttgaac ctggcggcat aaccgtctgt cgccccggcc acgtcgagca
     1081 gcagctgcga acccccgcca ttgtagatcc catcccccga gttcctcaag gtccgctgtc
     1141 ccttggatgc gtacggttcc atggcgtgca cctgatcggt caacgaatcg tcgaagaaga
     1201 gctgagaagt gaactcgtag gccgagctcg tcgaggcggc cgaacggatc ttgaagtgaa
     1261 tgtgcactgc gctaccctga taccagccag ggtagatggt ggtgaagcgc gccacgccat
     1321 cggagccggt cacctggtat ccccgcagga acttcttgcc cgaggtgttg aagctggggt
     1381 ccgacacgtc ggagtacact cccagtgcgt cgcagtgcca caggtcgacg atcgcgcccg
     1441 cgagaggtga gcaagcattc gaggcggatt aggggccctc ggtcagctcc ggccgcacca
     1501 cgcagaagga cgaggcatcg ccaggatcgc tgctggtggc ggtcgagtcc gagcagccgt
     1561 tggggttcgt cccttcgtga ctttgctctt ggtcttgcga gcagccaata gccaatagcc
     1621 tattgctgtg gaaaccggcg ccggcggagg ggccgcctcc gacgacgccg gggaagggga
     1681 taccgcggaa tgagagtggg gttacacctc ctctggtgaa tgccagtaat ctgggtctcc
     1741 cagtgag
//
LOCUS       DASYRV010000253         3942 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3168049, whole genome shotgun sequence.
ACCESSION   DASYRV010000253 DASYRV010000000
VERSION     DASYRV010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3942
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3168049"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..633
                     /locus_tag="VGQ24_06530"
     CDS             <1..633
                     /locus_tag="VGQ24_06530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454527.1"
                     /translation="GPSYDRRYARVKRPVVLTGGELTLDQLDLRYDPFTKLYQAPFQV
                     KANGGVLIVDDFGRQRVPPRDLLNRWIVPLEKRIDYLTLHTGGKFPVPFDCLLIFATN
                     LDPAELVEEAFLRRIHYKIPVVDPTRAQYEEIFRRCCKDAGLAYAPETVAYVFEEFYD
                     KRGIPPRGCHPRDLIAHVEDIAKYREITPQLTRELVDRACRSYFLESGPA"
     gene            630..1331
                     /locus_tag="VGQ24_06535"
     CDS             630..1331
                     /locus_tag="VGQ24_06535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454528.1"
                     /translation="MTGVKPGATPDPFKPEVTVDPFRRQMLELERGLTIRIEEQAREN
                     RRLRRLWMGTVVSGALLLGLASALLIVSARHGLPGTVADVIEARQFLLRDRSGAIRGS
                     WTTGDKGSIRLQLQAPGSKGGLSLAVLEGGASGITVRDSAGRSRSVLGLLPDQTVSLL
                     FADENGTTRTVLSLVRGGSSTLVFADRSGSAKVGVGVDSKGQSTLTLPEPPESRAEGT
                     EAFDSAPTNSPAPRR"
     gene            1493..2485
                     /locus_tag="VGQ24_06540"
     CDS             1493..2485
                     /locus_tag="VGQ24_06540"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronic acid decarboxylase family
                     protein"
                     /protein_id="HEV8454529.1"
                     /translation="MRILVTGGAGFLGSHLCERLLAEGHNVVCLDNLFTGRRENIAHL
                     FDHPKFELLRHDVTEPLFIDVEQIYNLACPASPLHYQYNPVKTVKSNVLGTINMLVLA
                     KRLRARVLQASTSEVYGDPTVHPQPETYWGNVNPIGPRSCYDEGKRVAETLMMDYHRQ
                     DKVDIRIARIFNTYGPRMAENDGRVVSNFIVQALRGQELTVYGTGEQTRSFCYVDELV
                     DGLIRLMQADGKHEPVNLGNPVEFTIGQLAQEVCRIIGGNIRVTYRPLPQDDPVQRKP
                     DITRAREWLGWEPRITLAEGLGHTVSFFRGRMARDPRASQLFQELTGTHDRASD"
     gene            2716..3276
                     /gene="dcd"
                     /locus_tag="VGQ24_06545"
     CDS             2716..3276
                     /gene="dcd"
                     /locus_tag="VGQ24_06545"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010543264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HEV8454530.1"
                     /translation="MSIKSDRWIRRMAHEHRMIEPFVDGQVRQGAISYGVSSYGYDMR
                     VAPEFRIFTNVLSAIVDPKHFDDRSFVKFDGDVCIVPPNSFALARSVEYFRIPRNILT
                     ICVGKSTYARCGIITNVTPFEPEWEGFVTLEISNTTPLPAKIYADEGICQVLFFEADD
                     DDVCQTSYADKKGKYQKQTGVTLPKL"
     gene            3293..>3942
                     /locus_tag="VGQ24_06550"
     CDS             3293..>3942
                     /locus_tag="VGQ24_06550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454531.1"
                     /translation="MRDITTIFLLALAPSLSLAPGRAAAQEPAGPKPVQPARPLTLPT
                     LRPPVADTGIFSPVPLPPPSDTRRADGAPGQAYWQQRVDYTIRATLDTAAKRLSGTET
                     IRYTNHSPDTLRFVWMQLDQNLFRQGSTGSLLFASESRFGAAGFQGGFDIGSVSQCGS
                     AGQQGGGAVPTKRKARAKPKSARDPLAVLPPCPAAPLKTRVDDTMMYVDLATPIPPG"
BASE COUNT          734 a         1310 c         1203 g          695 t
ORIGIN      
        1 gggccgagct acgaccggcg ctacgcgaga gtcaagcgcc ccgtcgtctt gactggcggc
       61 gagctgaccc tggaccagct cgatttgcga tacgacccgt tcaccaagct ctaccaggcg
      121 ccctttcagg tgaaggcaaa cggtggtgtc ctgatcgtgg acgacttcgg ccggcagcga
      181 gttccgcccc gcgacctgtt gaaccgctgg atcgtgccgc tggaaaagcg gatcgattat
      241 ctcacgctgc acaccggcgg aaaatttccg gtgccgttcg actgcctgct catcttcgcc
      301 accaatctcg accctgccga gctggtcgaa gaggcctttc tccggcggat tcactacaag
      361 atccccgtgg tagatccgac tcgggctcag tacgaggaaa tctttcgccg gtgctgcaag
      421 gacgcgggcc tggcctacgc tcccgaaacg gtggcctacg tcttcgagga attctacgac
      481 aagcgcggaa ttcctccacg cggctgccac ccgcgggatc tgatcgctca tgtggaggac
      541 attgccaagt accgggagat cacgccgcaa ctcacccgcg agctggtcga ccgggcctgc
      601 cggtcctact tcctggagag cggcccagca tgaccggagt caagcccggc gccacgcccg
      661 accctttcaa gccggaggtc acggtcgatc cgttccggcg ccagatgctt gagctggaac
      721 gaggcctgac gatccgcatc gaagagcagg cccgggagaa tcggcggctc cggcggctct
      781 ggatggggac ggtggtgagc ggggcgctcc tgctcgggct ggcgagcgcc ctgctgatcg
      841 tatctgcacg gcatggtctc ccgggcaccg tggccgatgt catcgaggcc cggcaattcc
      901 tgctgcgtga tcggagcgga gccattcgcg gctcctggac cactggagac aagggctcga
      961 tacgcctcca gctccaggct ccggggagca agggaggact gagccttgcg gtgctcgagg
     1021 gaggagcctc cggaatcacc gtgagagaca gcgcgggccg ctcccgctcc gtcctcggcc
     1081 tgttgccgga tcagaccgtg agcctgctgt ttgccgacga gaacggtacc acgcgaaccg
     1141 tgctcagcct ggttcggggt ggctcgtcca cgctggtctt cgccgaccgg agcggcagtg
     1201 caaaagtagg cgtgggagtg gattccaagg ggcagagcac cctgaccctg ccggagcctc
     1261 ccgagagccg agccgagggg acggaggcgt tcgattcagc cccgacgaac tccccggcac
     1321 cgcgacgtta gcagtcgatc tgtgttagtc gggccacact ggggcgtgct cgcagcaccc
     1381 cgacccaagg cgaacccccg tctgggtcgg ccggtgcggc cggtgacggt tctttaagtc
     1441 aggcatggaa ggtgcccagg ggagcaccat tccctcaaca agactcagga acatgcgcat
     1501 tctcgtgacc ggcggcgccg gattcctcgg ttcccacctc tgtgagcgac tgcttgcaga
     1561 aggtcataat gtggtctgcc tggataacct cttcaccggc cggcgcgaga acatcgccca
     1621 tctgttcgat catcctaagt tcgagctgct ccgacacgat gttaccgagc cgcttttcat
     1681 tgatgtggag cagatctaca acctggcctg tccggcgtcg cccctccact accagtacaa
     1741 cccggtcaag accgtcaaat ccaatgtgct tggcaccatc aacatgctgg tgctagccaa
     1801 gcggctgcgc gcccgggtac tgcaggcctc gacttcggag gtctatggag atccgaccgt
     1861 tcatccccag ccggagacct actggggcaa tgtcaatccc atcggcccac gctcctgcta
     1921 cgacgaaggc aagcgcgtcg ccgaaacgct catgatggac taccaccgtc aagacaaggt
     1981 cgatatccgc atcgctcgta tcttcaacac ctacgggcca cggatggcgg agaacgacgg
     2041 gcgggtggtt tccaacttca tcgtacaggc cctccgggga caggagttga cggtttacgg
     2101 gaccggcgaa cagacccgct cgttctgcta cgtggacgag ctggtcgatg gactcatcag
     2161 attgatgcag gcagacggca agcacgagcc ggtcaatctt ggcaacccgg tcgagtttac
     2221 cattggacaa ctggctcagg aggtatgtcg catcatcggt gggaacatcc gggtaacgta
     2281 tcggcccctt ccccaggatg atccggttca acgcaaaccc gacatcaccc gggcccgcga
     2341 atggctcggg tgggaaccca ggatcaccct ggccgagggg ctggggcaca cggtctcgtt
     2401 ttttcgcggt cgcatggccc gcgaccccag agccagccag ctatttcagg agctcaccgg
     2461 aactcacgat cgggccagcg actaggtcgg agctgccggc ctcccccatc ctggagccgg
     2521 tccttactgc ccgccgcctc gagcttaatc tacgccaaat ggcgcgttct ctccggacgc
     2581 gccaggtctt gcaagggtag tcgcctcaag cccttcctcc cgtagtatat tccccgccta
     2641 ttcggccgtg gcgcacctgc cccgctgccc gttcacccgc tgggcggaat agccgccctc
     2701 tgccccgctg aggcaatgtc gatcaagtcc gaccgctgga tccgccgcat ggcccacgag
     2761 cacaggatga tcgagccgtt cgtggacggt caggttcgcc agggcgccat ctcctacggc
     2821 gtctcgtcct atggctacga catgcgggtg gcacccgagt tcaggatctt taccaacgta
     2881 ctctcggcga tcgtggatcc gaagcacttc gacgaccgca gcttcgtcaa gttcgacggg
     2941 gatgtctgca tcgtgccgcc caacagcttt gccctggcac gctcagtcga gtacttccgg
     3001 attccccgta acattctcac gatctgcgtc ggcaaatcca cctatgcccg ctgcgggatt
     3061 atcaccaacg tcaccccgtt cgagcccgag tgggaaggct tcgtgacgct ggagatcagc
     3121 aataccaccc cgctccccgc caagatctac gccgacgagg gaatctgcca ggtgctcttc
     3181 ttcgaggcgg atgacgacga tgtctgccag accagctatg cagacaagaa gggcaagtat
     3241 cagaagcaga ccggcgtgac cctgccgaag ctctaagaga agacgacgac ccatgcgtga
     3301 catcacgacg atcttcctcc tggccctggc cccgtcgctc tcgctcgccc cgggtcgcgc
     3361 ggcggctcag gagccggccg gacccaagcc ggtccagccc gcccgcccac tgacgctgcc
     3421 gactctgcgg ccgccggtcg ccgataccgg catcttcagc cccgttccac tcccaccgcc
     3481 aagcgacacc cgccgagccg atggcgcacc gggacaggcg tactggcagc agcgggtgga
     3541 ctacaccatc cgggccactc tggatacggc agccaagcgg ctgagtggca cggaaacgat
     3601 caggtacacc aaccactcgc cggatacgct gcggttcgtc tggatgcagc tggatcagaa
     3661 tctgttccgg cagggcagca cggggtcgct gctctttgcg tccgagagcc ggttcggcgc
     3721 tgcggggttt caaggcgggt tcgatatcgg cagtgtgagc caatgcgggt cagcggggca
     3781 gcagggcggc ggggcagtgc caacaaaacg aaaagctagg gcgaagccta aatccgctcg
     3841 ggatccactt gcagtgctgc ccccctgccc cgctgccccg ctaaaaaccc gggtagacga
     3901 tacgatgatg tacgtggatc tcgccacgcc gatcccgccg gg
//
LOCUS       DASYRV010000254        11167 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_309117, whole genome shotgun sequence.
ACCESSION   DASYRV010000254 DASYRV010000000
VERSION     DASYRV010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11167
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309117"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1045
                     /locus_tag="VGQ24_06555"
     CDS             <1..1045
                     /locus_tag="VGQ24_06555"
                     /inference="COORDINATES: protein motif:HMM:NF014582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HEV8454532.1"
                     /translation="EELTVERIRLPQFGVMEVRVVNGGPEPVTVAQVMVDDANWVHSL
                     DGSRIIDRLESRTITIPYPWVEGEPHTVALVTSTGLTFTGEVPVAALSPSVGPRYLTT
                     FALLGLYAGVIPVFIGLLWLPFVRSVGRRWTDFFLCLTIGLLIFLGVSALLEAFETAS
                     VVPPAFQGNALVLLGTLGTLLVLTAIGRWRSGARGERSPLYVAGLIALGIGLHNLGEG
                     LAIGTSYASGEIALGTFLVVGFLLHNTTEGLGIVTPLAEERPRLRSLILLGALAGVPT
                     ILGAWVGGFTYSPIWTTLFLAIGAGAIAQVVYELWRMFSRRSSSTMYAPLNTAGLFLG
                     LLIMYATGLLVAV"
     gene            1042..1839
                     /locus_tag="VGQ24_06560"
     CDS             1042..1839
                     /locus_tag="VGQ24_06560"
                     /inference="COORDINATES: protein motif:HMM:NF024946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HEV8454533.1"
                     /translation="MRQRLLVTVHAFLFFSVSSLAGQIQDNSFLIEEAYNQERGVVQH
                     IGTFQRASGGDWELGFTQEWPLGGIKHQLSYTIPVQRGDVTGTGLGDVALNYRYQLAG
                     DPEATTVVAPRFSVLLPTGDDELERGSGGVGVQTNIPVSYVVGPKLVTHWNAGVTVTP
                     SARNPLGQSATTTDLNLGASAVWLLRPSFNLMVEALWLSTRSVVGEGLTARENTGYLS
                     PGFRMAFDVAGDLQIVPGLAYTFGLDPESDEDALFFYLSFEHPFSRQ"
     gene            complement(1833..2774)
                     /locus_tag="VGQ24_06565"
     CDS             complement(1833..2774)
                     /locus_tag="VGQ24_06565"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HEV8454534.1"
                     /translation="MSGQNQPKVAILGMSEAGRGWATLISGAGWQVTIYDPDSAQLHG
                     GEEEIATRKRHSHGSGLPAIPDDNNNHPPGEPRLGRSLLDAVTTADWIIDATMSDLLH
                     RQRLLEQVESVSRMAAIVTCSAAGLSPTDLCARLRRPARLLVAYALDPVEQIPAVEVV
                     PGPLTDPACLDAVRNWLRRLGRIPVVLRKEIPGNATGRIAVAVWRECIRLVLDGVLEV
                     RDVDALISSGLAARWAAAGPFQTAYLEAGERATAQLSAMLRSSESRWEGDDGSHIPPA
                     EHAHLIRLIQRAYDGEGDVLRGARDERLAELRRIVGY"
     gene            2872..3711
                     /locus_tag="VGQ24_06570"
     CDS             2872..3711
                     /locus_tag="VGQ24_06570"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8454535.1"
                     /translation="MTIRVRHWCCLPAALLAAQLTPATAQVSEIAVERRLARELDLSV
                     GDTLRLGPTPDSVATLVRVAAVYEPRPDPAEIAKRERHVRMHLPDLASLLGLPDRVDR
                     LSIGLNPGISSDSAVAALNRTAFGYRAYGTTSIASESSQTFLVVSRFHRAIAVITIVA
                     SAVFLLCIMLLKVEERRLDAAVMRFVGVRRRTIFGALLLEAAVVAAFGSILGTGLAYA
                     AGAATNAYYGRFFDTTLIFSLITPDLVLFSVALSLALGIAAGAVAAWRLVHTRPLVLW
                     GRG"
     gene            3717..4898
                     /locus_tag="VGQ24_06575"
     CDS             3717..4898
                     /locus_tag="VGQ24_06575"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEV8454536.1"
                     /translation="MGWLKSLGRHRLRTSLSIAGIAISGAMLLDMVMLSGGIEKSFAE
                     MLLARGYQIRLTPKGTLPFDTEATLSGAGEQIATLRRDTAIASAGAVLGTSLYGRTRD
                     SLVTLFGYGIQPEAQSLYVLESGRDLTPDDSLGILLSTPAARLLGASFGDTVTLVGRL
                     DPQVVTSSVARRLVVRGMVHWVYDYRGQPSVGTVLPVMQTLANQRAGDRASLLVVKVR
                     DDRVADDVAARLATAFPRLEVNSVADLVRHFKQRLVYFHQLSYILGSMSLIVTVLLIA
                     TLLTITVNERLGEIATLRAIGISRATVTRQVLVEGTTLTIIGGALGIVLGIATARYLD
                     SILTSFPGLPAAFSFFVPRRESLATAGLVLLVTGSLAGLYPAWLAARAPIAATLRAEA
                     T"
     gene            4895..5677
                     /locus_tag="VGQ24_06580"
     CDS             4895..5677
                     /locus_tag="VGQ24_06580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEV8454537.1"
                     /translation="MSGGRGTAQVQGQTVLLARDLSKDYPMNGEAVHALRGISLEVRT
                     GEYVAVVGPSGSGKSTLLQLIGGIDIPSRGSVEIMGTSLGSLSDRQLTRLRLNHLGFV
                     FQRFHLLPVLTARENVELPMAEAGVRGRERRARALDLLGYVGLEHRAGHRVTQLSGGE
                     MQRVAIARALANQPALLLADEPTGELDAGTGEEILALFSRLNRDGMTLVVVTHDERLA
                     AQAGRVIHMLDGRITSETLLDVAAPPIRLPTSPPPRLPASPL"
     gene            5707..7113
                     /locus_tag="VGQ24_06585"
     CDS             5707..7113
                     /locus_tag="VGQ24_06585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454538.1"
                     /translation="MRKLRSLFLLAGFSLGVAVMIVLLSVGQAMLEQSRDASLVGGGE
                     VTVLPQGIDVEAMRTGGLGGMYFGIDRARFLGRQILGGERQRRLVRVVSPGIEGKLLY
                     LRRGDRTIAVRAGGEIPSRTLAVGSGLDVRSGRWEDSPVDSSYMAPTKQQLYDELDHF
                     HVQARPDSSWGEWHYFNLVNSPREWWYVTYLIGGQAPLGQLLVTHRRSDGAYERYVSQ
                     APSDQVTFDTARADVTIGGNFVRQRSGVYRLRGLAHGRTGQVSLDVSVTPAANRYFPP
                     VELRDEGFVSGYVAPGLVASGSGNICVRQRCRRFSDIPAYHDHNWGIWRDVTWEWGAA
                     RGNRLSLLYGGVYGPGRSSDATTSNVSSPFFLTLVDSLGVEQVLRFDRIGYEGARPAS
                     GAVGATSPERFSIVAERESDTLRLDVRVVDALATEMGAGGFRRVFLQMRGRFSLSGRV
                     LGKAVADSGTGFFETYVN"
     gene            complement(7254..8270)
                     /locus_tag="VGQ24_06590"
     CDS             complement(7254..8270)
                     /locus_tag="VGQ24_06590"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEV8454539.1"
                     /translation="MRIVLIGGTNFIGPHVVAILHRLGHEITVYHRGHHEPDLPPGVR
                     HIHSSLAGIPVLHFPSEIIDPAPDVVLHMFPVGEDDARAAMTRFAGIAGRMVALSSGD
                     VYRAYGRLLGTEPGMAEPLPLDENAPLREALYPYRHMAAGPADWTFHYDKILAERSVM
                     SHPNLEGTVLRLPAVYGPGDPYRRLRPYIKRMDDLRPAILLESAQAGWRWTHGYVENV
                     AQAIALAVVDDRAAGRIYNVGEAETPTVADRVRRIGGLAGWNGAVVSLESDRLPSHLR
                     APYQPRQDLVMETSRLRDGLDFVEVCSTDEGLRRTIEWERANPPTTGDPGVLEYAAED
                     AVLR"
     gene            complement(8290..9888)
                     /locus_tag="VGQ24_06595"
     CDS             complement(8290..9888)
                     /locus_tag="VGQ24_06595"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEV8454540.1"
                     /translation="MSTVPCKTRPDRSRRGFLLLGAVLLGFAPLQAQQPEADDAWNQG
                     RYDAARAAYARVLASNPRSARANLRVGIILSWQGKLDSALVFLARARASEPADQDIRL
                     AQAQVMAWNKQYGDALLRYDSLLAVQPGLREALLGRARTLSWGGRLDQARSVYRRMIA
                     KDSTDWDAVLGVAQVNAWKGDLPAAEQGYRAVLMRNPRDADARVGLGYVYLWQGRAGA
                     AGRQAGYALAIDSTHKAARELRRLVRAGARPSVETSANWSNDSDHNTSFWQTVAASAP
                     LGGGIGIFGSVNALEASDPVREATRVGGELGLTMAAGHFQLTGAAGVRRLNPEIADPR
                     TVATYRGQIRYRPVPSLGLGAGYSRVPFDEIASLFERELDMELLEAGFDARPVSGLTV
                     YAGGGVLWLNDGNSRWSGSAGLTQKILRHFFIGAFGRTLSYDHPGVGYFSPDRFSVLE
                     GIAGYSLERGSWIGGLSGGVGAQQVGKRGAAQSEWHLEGRLGQRWGSGNRVEAFGLVT
                     NSAVSSTTGAFRYGSAGLLVRLGL"
     gene            10055..11119
                     /locus_tag="VGQ24_06600"
     CDS             10055..11119
                     /locus_tag="VGQ24_06600"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEV8454541.1"
                     /translation="MPSVVVLEPLRVAVFALAGAIVLLFLVLLIERAVSSFQKSRVRR
                     KEALLTELVYRAIQATPGILEVGTLSRFDRRVVRGILLGLAPDLRGESGEAIAELYRS
                     LGLLRGDLKRLRSWRAITRANAAADLGLVRAAEALPALTEALDDPDVRVREATVWALG
                     QSGGPATLAALVRLLGDSSVTVARRAQEVLAERGHEVKDAILTYAGKSTNRSGRLAAV
                     ELLGWLRISGGAELLVDFMGDLDPEVRVKSVKAAAAVGDPRFMGVFHRLLNDPRWEVR
                     CQAAKGLTVFGSPDSVPFLEKSLRDQHWWVRFYAATALSEAGPRGEEILHQALRDPDA
                     PVRGMARYLLERGGAVPVLP"
BASE COUNT         1779 a         3636 c         3639 g         2113 t
ORIGIN      
        1 tgaggagctc acggttgaga ggattcggct tccccagttc ggggtcatgg aggtcagagt
       61 ggtgaatggc ggcccggagc cggtcaccgt ggctcaggtc atggttgacg atgccaactg
      121 ggtacacagc ctcgatggca gccgcatcat cgatcgcttg gagagccgca ccatcactat
      181 tccctatccc tgggtcgaag gcgagccgca caccgtcgcc ctggtcacca gcaccgggct
      241 cacattcacc ggggaagttc cggtcgccgc gctatcgccc tcggtcgggc cccgttacct
      301 gacgaccttt gcccttctag ggctctacgc tggtgtcatc cccgtcttca tcggtctact
      361 ctggttgccg ttcgtgcggt ccgtcgggcg gcgttggacc gatttcttcc tttgtctcac
      421 gattgggctt ctcatctttc tcggggtgag cgccctgctc gaggcgttcg agacagcgtc
      481 ggtggtaccg cccgcgtttc agggaaatgc tctagtactc ctgggcacgc tgggaacgct
      541 cctcgtgctc accgccatcg gccgatggcg ttcgggcgcg cggggtgaac gatcccccct
      601 ttacgtggcc gggctgattg ccctagggat cgggctccac aatctgggcg aggggctcgc
      661 catcgggacc tcgtatgcct cgggcgagat cgccctgggc acgttcctgg tggtcgggtt
      721 tctgctgcac aacacgacgg aaggactggg tatcgtcacc cccctcgccg aagaacggcc
      781 gcggctacgc tcgctgattc ttctcggggc tctcgcagga gtccccacca tcctgggggc
      841 ctgggttggc ggcttcacct actcgccgat ctggacgacg ctgttcctgg cgatcggtgc
      901 gggggctatc gcccaagtgg tgtacgagct gtggcggatg ttctcccggc gctcatcctc
      961 cacgatgtac gcccccctca acaccgcggg actgttcctt ggactcctga tcatgtatgc
     1021 caccggcctc ttggtggcgg tatgagacag cgtttactgg tcaccgttca cgcttttctc
     1081 tttttctcgg tctcatccct cgccggacaa atccaggata acagcttcct gatcgaggaa
     1141 gcctacaacc aggagcgcgg cgtggtgcag catatcggca cctttcaacg cgcctccggt
     1201 ggcgattggg agcttggctt cacccaggag tggccgctcg gcggaatcaa gcaccagctc
     1261 agttacacca ttcccgtgca gcgcggcgat gtcaccggca ccggtctcgg tgatgtcgcc
     1321 ctgaactatc gctatcagtt ggcgggtgac ccggaagcga cgacggtagt cgctccccga
     1381 ttctcagttc tgctgcctac cggggatgat gagctggagc ggggcagcgg gggcgtgggc
     1441 gtgcaaacaa atattcccgt atcatatgtg gtcgggccta agctcgtgac ccactggaat
     1501 gcgggggtaa cggtcacccc atcggcccgc aatccgctgg gccaatcggc gacaacgacc
     1561 gatctcaatc tgggtgcgag cgcggtgtgg ctgctccggc cttcatttaa tctcatggtc
     1621 gaggcgctgt ggctcagcac gcgatcagtt gtgggagagg gactgaccgc gcgtgagaac
     1681 accggctatt tgagcccggg gtttcggatg gccttcgatg tggcggggga cctgcagatt
     1741 gtacccgggc tggcctatac cttcgggctg gaccccgagt ccgacgaaga tgcgctgttc
     1801 ttctacctca gtttcgagca ccccttcagc cgtcagtagc cgacgatcct tctcagctcg
     1861 gccagccgct cgtcgcgcgc gccccgaagc acgtctccct caccatcgta cgcccgctga
     1921 atcaggcgga tcaggtgcgc atgctcggcc ggcgggatgt gagaaccgtc gtcgccctcc
     1981 cagcggctct cgctcgaccg aagcatggcg ctgagctgcg cggtggccct ctctcccgct
     2041 tccagatatg cggtctgaaa cggtcctgcc gcggcccagc gcgcggccag gccggaggag
     2101 atgagcgcgt ccacgtcccg tacctcgagc acgccgtcca gcaccaaccg gatgcactcc
     2161 cgccacacgg cgacggcgat ccggccggtg gcgttcccgg gaatctcctt tcggagcacg
     2221 accggaatgc ggccaagcct cctgagccag ttgcgcacgg cgtcaaggca ggccggatcg
     2281 gtcagcggtc cgggcaccac ctcgaccgcc gggatctgct cgaccgggtc gagggcatac
     2341 gccaccagca gacgggcagg acggcgaagc cgggcgcaga ggtcggtggg ggacagtccg
     2401 gcggcgctgc aggtcacgat ggctgccatc ctcgagacgc tctcgacctg ctccagcaga
     2461 cgctgccggt ggagcagatc gctcatagtg gcgtcgatga tccagtcggc agtggttacc
     2521 gcatccagca ggctccgtcc cagcctcggc tcgccggggg gatggttgtt gttgtcgtcc
     2581 gggatcgcgg ggagtcccga accatgcgag tgtcgcttcc tggtcgcgat ctcctcctcc
     2641 ccgccgtgaa gttgagccga gtccgggtca tagatcgtga cctgccagcc cgctcctgag
     2701 atcagggtag cccagccccg acccgcctcg ctcatgccga ggatggcgac ctttggttgg
     2761 ttctgaccgc tcatgaagct ccttgcaggt atcgcagccg gctggcccgc cggctcaact
     2821 accttactac gggtacaccg cagtccagct tgacggaact cgaaggaatg catgaccata
     2881 cgcgtaagac actggtgctg cctgccggcg gctctgcttg ccgctcaatt gactccggca
     2941 accgcccaag tctccgaaat agccgtcgaa cggcggctcg cgcgcgaatt ggacctctcg
     3001 gtcggcgaca ccctccgcct gggacccacc cccgactccg tcgccacgct cgtccgggtt
     3061 gcggcagtgt acgagcctcg gccggacccg gccgagatcg ccaaacggga gcgccacgtc
     3121 aggatgcacc tgccagatct ggcatctctc ctgggtttgc cagacagggt cgatcgcttg
     3181 agtatcggct tgaaccccgg gatttcttca gattccgctg tagcggccct caaccgcacc
     3241 gcctttgggt atcgggcgta cggcaccact tccatagcct cggagtcttc ccagacgttc
     3301 ctggtggtca gccgcttcca tagggcaatc gcggtgatca ccattgtcgc cagcgccgtg
     3361 ttccttctgt gcatcatgct gctcaaggtg gaggagcgac gcctggacgc cgcggtcatg
     3421 cggtttgtcg gggtacggcg gcggaccatc ttcggtgcgc tgctgctgga agcggcagtg
     3481 gtagcggcgt ttggctccat cctggggacc ggcctggcct atgccgcggg ggcagccacc
     3541 aatgcctatt acggccgctt cttcgatacg acgctcatct tctccctgat tactccggat
     3601 ctggtgctct tcagcgtggc cttgtccctc gctcttggga tagcggctgg agcagtggcc
     3661 gcatggcgcc tggtgcatac ccggcctttg gtactgtggg ggcgggggtg agtggaatgg
     3721 gctggctcaa gagtttggga cgtcatcggc tccggacctc cctgtcgatc gcaggcattg
     3781 ccatctcggg agccatgctg ctcgacatgg tgatgctgag tggcggaatc gagaagtctt
     3841 tcgccgagat gctcctggct cgaggctatc agatcaggct cacgcccaag ggcaccctac
     3901 cgttcgacac cgaggccacc ctctcgggtg caggggagca gatcgccacc ctccggcggg
     3961 ataccgccat cgcatcggcc ggtgcagtgc tcgggacctc cttgtacggc cgaaccaggg
     4021 actcgctggt gaccctgttc ggctacggga ttcagccgga ggcgcagtcg ctatatgtcc
     4081 tggagtcggg gcgggacctc acgccggatg acagccttgg catcctcctc agcaccccgg
     4141 cagcacgcct gctcggcgcg agctttgggg atactgtcac gctggtcggg cgactcgacc
     4201 cccaggtggt cacgtcgtcg gtagccagga gactcgtcgt gcgcgggatg gtgcactggg
     4261 tctatgacta tagggggcag ccttccgttg gaaccgtgct gccggtcatg cagacgctgg
     4321 ccaatcaacg ggcaggtgac cgcgcctcgc tgttggtcgt gaaggtgcgg gacgaccgtg
     4381 tggcggacga tgtggctgcc cggctcgcta cggcgttccc gcggctcgaa gtaaacagcg
     4441 tggccgacct ggtgaggcac ttcaagcaac ggctggtgta cttccaccag ctctcctaca
     4501 tcctgggcag catgagcctg atcgtcacgg tgcttctgat agccacgttg ctcaccatca
     4561 ccgtgaatga gcgcctgggc gagattgcca cccttcgcgc catcgggatc agccgggcca
     4621 cggtcactcg ccaggttctg gtcgagggta ccacgctgac gatcatcggc ggcgcgctgg
     4681 gaatcgtgct cggcatcgcc acggcacggt atctcgatag catcctgacg agcttccccg
     4741 ggttgcccgc ggccttctcg ttcttcgtcc cccgacgtga gagcctggcc accgcaggcc
     4801 tggtactgct cgtcaccggt tccctcgccg gcctctatcc tgcgtggctg gcggcgcgcg
     4861 cgcccatcgc ggccacgctg cgggccgaag cgacatgagt ggcgggcgtg ggaccgccca
     4921 ggtccagggg caaacagttc tcctggctcg tgatctctcc aaggattatc cgatgaatgg
     4981 agaggcagtg cacgccttac ggggcatttc gctggaggtc cgaaccggcg aatacgttgc
     5041 cgtggtaggt ccttccggaa gcggcaagtc aacgctgctc cagctgatcg gcgggattga
     5101 catcccctcg cgaggatcgg tcgaaatcat gggcacttcg ctcgggtcgc tctccgaccg
     5161 ccaactcacc cggctccgcc tcaaccacct cggcttcgtg tttcaacggt tccatctgct
     5221 accggttctc accgcccggg aaaacgtgga gctgccgatg gccgaggccg gcgtgagggg
     5281 cagagagaga cgggcacgtg cactcgatct gctgggttat gttggcctgg aacatcgggc
     5341 cgggcatcgg gtgacccagc tctccggtgg ggagatgcag cgggtcgcta tcgctcgtgc
     5401 gctggccaac cagccggcgc tgctcctggc cgacgagcca accggtgagc tcgatgccgg
     5461 cacgggtgag gagattctcg cgctgttcag ccgcctcaat agggacggca tgactctggt
     5521 cgtcgtcacc cacgacgagc ggctcgccgc tcaagccggg cgtgtcatcc acatgctgga
     5581 tggccgtatt acgtcggaga ctctgctcga cgtcgccgcc ccgcctatcc gcttacctac
     5641 ctccccgcct ccccgcctcc ccgcctcccc gctgtgatag ccacactcgc ctttcgccat
     5701 ctcctcgtgc gcaagctccg ttctctcttc ctgctcgcgg gcttctcgct gggcgtggcc
     5761 gtcatgatcg tcctgctctc agtaggccag gcaatgctgg agcagtcgcg cgacgcgtcg
     5821 ctcgttggcg gcggtgaggt cacggtgctg ccccagggta tcgatgtgga ggcgatgcgg
     5881 accggcggcc tgggcgggat gtacttcggg atcgatcgag ctcgctttct cggccgccag
     5941 attctcggag gtgaacggca acggcggctg gtgcgggtcg tctcgcccgg gatcgagggg
     6001 aagctccttt atcttcggcg cggcgatcgc accatagcgg tgcgtgcggg cggcgaaatt
     6061 cccagccgga ctttggccgt cggatccggc ctggatgttc gcagcggtcg gtgggaggat
     6121 tccccggtgg actcgagcta catggctcca acgaagcaac aactctatga cgagctcgac
     6181 cattttcacg tccaggcaag gccggactca tcatggggcg agtggcacta cttcaacctg
     6241 gtcaactcac cccgtgagtg gtggtacgtt acctatctga tcggcgggca ggcgccgctc
     6301 ggccagcttc tcgtcactca tcgccgaagc gacggcgcgt acgagcgata cgtctcccag
     6361 gcaccgtccg accaggtgac attcgacacg gcccgcgccg atgtgacgat cgggggcaac
     6421 ttcgtgcggc agagaagcgg ggtctatcgc ttgcgcggtc tggcccacgg ccggacggga
     6481 caggtcagcc ttgatgtgag tgtgaccccc gcagccaacc ggtattttcc gccggtggag
     6541 ctccgggatg agggttttgt gtccggttac gtcgcccccg gactcgtagc tagcggctcg
     6601 gggaacatct gcgtcaggca gcgctgccgc aggttcagcg acatcccggc gtatcatgat
     6661 cacaactggg gtatctggcg ggatgtcacc tgggagtggg gtgccgcccg ggggaacagg
     6721 ctcagcctct tgtacggtgg ggtctacggg cctggacgca gcagcgacgc cacaacctcc
     6781 aatgtcagct cccctttctt cctgacgttg gtggactcac tcggtgtgga gcaggttctc
     6841 cgattcgacc gcatcggcta cgaaggtgcg cgccctgctt caggggcagt cggtgcgaca
     6901 tcgccggagc gattcagcat cgtggctgaa cgcgaatccg atacgttgcg gctcgatgtg
     6961 cgggtcgtcg acgcgcttgc tactgagatg ggcgccggcg gattccgccg agtctttctc
     7021 cagatgcggg gacgcttctc gctgtcgggc cgagtgctcg ggaaggcggt ggcggactcg
     7081 gggaccgggt tcttcgagac ctacgtcaat tagccagtgg agctggcgag tcccgacggc
     7141 tgagtgtaag gagtggtgcg gggggaagtc tgacactcga agccggaggg gctcgtccgg
     7201 ctccgctggc tgaaaaggta gagacggccg gcgaaacggg accgcgagcg atttcagcgc
     7261 agcaccgcgt cctctgcggc atactctagg acccccggat caccagtggt gggaggattg
     7321 gcgcgctccc actcgatcgt tcgccggagc ccctcatctg tcgaacaaac ctcgacaaaa
     7381 tccaacccgt cgcgaagtct gcttgtctcc attaccaggt cctggcgcgg ctggtacggc
     7441 gcgcggagat gagacggtag cctatctgac tcgagcgaaa ctaccgcgcc gttccatcct
     7501 gccagcccgc cgatgcgccg aacccggtcc gccaccgtag gggtttccgc ctctcccacg
     7561 ttgtagatcc tcccggccgc gcggtcgtcg accaccgcga gcgcgatggc ctgggcaaca
     7621 ttctcgacgt atccgtgggt ccatcgccat ccggcctgag cggattcgag gaggatcgcg
     7681 gggcggaggt cgtccatgcg cttgatgtag ggccgcagcc ggcgataggg atcaccgggc
     7741 ccgtacaccg ccggaagccg cagtaccgtg ccctctaggt tgggatgact catcacggac
     7801 cgttccgcga gaatcttgtc gtagtggaat gtccagtctg ccggaccagc ggccatatgg
     7861 cgataggggt acagagcctc ccgtagcgga gcgttctcat ccagcggcag cggctcagcc
     7921 ataccgggct ctgtcccgag cagacgccca taggcccggt acacgtcacc gctgctcagc
     7981 gcgaccattc gccccgcaat gccggcaaat cgggtcattg ccgcccgggc gtcgtcctcg
     8041 ccgacgggaa acatgtgcag cactacatcg ggcgcgggat cgatgatttc cgaggggaag
     8101 tggagaacgg gtattccggc cagcgagctg tggatatgcc gcacacccgg gggaaggtcg
     8161 ggctcgtgat gaccccgatg gtagaccgtg atctcgtgcc cgagccggtg cagaatggca
     8221 acgacatgcg gtccgatgaa gttggtgcca ccgatcagca cgatccgcat gtgccgtacc
     8281 ttgggaccgc tacaagccca acctcaccag caaaccggcc gagccatagc ggaatgcccc
     8341 ggtcgtggag ctgaccgcgc tgttggtgac caatccgaat gcctctactc gattgccgct
     8401 tccccaccgc tggcccaacc ggccttcgag atgccattcg ctttgggcgg ctcctcgctt
     8461 ccccacctgc tgggctccga ccccgccact caggccgccg atccaggagc cacgctccag
     8521 gctgtagccg gcgattcctt cgagcacgga gaaccggtcg ggcgaaaaat acccaactcc
     8581 ggggtgatcg taggacaaag ttcggccaaa cgccccgatg aagaagtggc ggagaatctt
     8641 ctgggtgagc cctgcgctcc cgctccaccg gctgttcccg tcgttgagcc agagtacacc
     8701 gccaccggcg tacaccgtga ggcctgagac gggccgcgca tcgaagcccg cctcgagtag
     8761 ctccatgtcc agttcccgct cgaacaggga cgcgatctcg tcgaagggta cccgggagta
     8821 gccggcgccc aatcccaggg acggaaccgg ccggtaacgg atttggcccc gataggtggc
     8881 aacagtgcgc gggtctgcga tctcagggtt gagccgccgg acaccggcgg ccccggtgag
     8941 ctggaagtga cctgctgcca tcgtaaggcc cagctcgccg ccgacccgag tggcctctcg
     9001 cactggatcg ctggcttcga gcgcgttcac cgagccgaag atcccgatcc cgccgcccag
     9061 cggtgccgac gcggccacgg tctgccagaa gctcgtgttg tgatcagagt cgttactcca
     9121 gttggcgctg gtctcgaccg atggtctcgc accggcacgg accagacgcc tgagctcacg
     9181 agctgccttg tgcgtggagt cgattgcaag cgcatagccc gcctgccgtc ctgctgcccc
     9241 cgctcgaccc tgccacaggt acacatatcc cagcccaact cgggcgtccg cgtcccgcgg
     9301 attccgcatg aggactgcgc gatacccctg ttcagcagcc ggcaggtcgc ccttccaggc
     9361 gttgacctgc gccacgccga gcacagcgtc ccagtcggtg gagtccttcg cgatcatgcg
     9421 gcgatagacc gaccgcgcct ggtcgagccg tcccccccag gaaagcgtgc gggcacgccc
     9481 caggagggcc tcgcgcaatc cgggctggac cgcgagaagg ctgtcgtaac ggaggagagc
     9541 gtcgccgtat tgcttgttcc acgccatcac ctgggcttga gccaggcgga tgtcctggtc
     9601 ggccggctcg gaggcccggg cgcgggcgag aaagaccagt gccgagtcga gctttccctg
     9661 ccacgagagg atgatcccaa cccgcagatt ggctctggcc gaccgaggat tcgaggccag
     9721 cactctcgcg taagccgctc gggcggcgtc gtagcgaccc tggttccacg cgtcgtcggc
     9781 ctcaggctgt tgggcctgca gaggagcgaa cccgaggaga accgcgccga gcagcaggaa
     9841 accgcggcgc gagcgatctg ggcgcgtttt gcacgggacc gtgctcatcc ggtgttcaag
     9901 cgctcgcagc tgggagtgca atgtgccatc ggtcaacgag ttgcctgctc ggctgacgga
     9961 acttacgggg ggaacggaag ttgccttgca agtttggagc ccaccacccc tgaccctgat
    10021 ctgcagcgca cgtagcccgg agccctatct cggcatgccg tccgtcgtcg tattggagcc
    10081 actcagggtc gctgtcttcg ctctggcagg tgccatcgtt ctgctctttc tggttcttct
    10141 gatcgagcgg gcggtgtcgt cgttccagaa gagccgcgta aggcggaagg aggctctgct
    10201 caccgagctg gtgtaccgtg ccatccaggc gacaccgggc atcttagagg tcggcacact
    10261 ttcaagattc gatcgtcgag tggttcgcgg gatcctgctt ggtctcgcgc ccgacctccg
    10321 cggagaaagc ggcgaggcga ttgcggagct ctaccgcagc ctcgggttgc tccggggcga
    10381 cctcaaacgc ctgcgctcgt ggcgggcgat tacccgggcg aacgcggccg cggatctcgg
    10441 gctcgtgcga gcggctgaag ctctgccagc cctcacggag gccctcgacg atcccgatgt
    10501 ccgggtgcga gaggcgacgg tctgggcgct gggacagtct ggaggtcccg ctaccctcgc
    10561 cgcactggta cgcctcctcg gtgattccag cgttaccgtc gcacgccgcg cccaggaggt
    10621 cctggccgag cggggtcacg aagtcaaaga tgcgatcctg acctatgccg gaaaaagtac
    10681 taaccggtcc gggcgtttgg ccgcggtcga gctgctgggc tggctccgta tctcgggcgg
    10741 tgcggaattg ctggtcgatt tcatgggtga tctcgatccc gaggtgcggg tcaagagcgt
    10801 gaaggcggcg gccgcggtcg gcgatccccg gtttatgggg gtgttccacc ggctgttgaa
    10861 cgatccgagg tgggaggtcc gctgccaggc tgccaaggga ctcaccgtat tcgggagtcc
    10921 cgactcggtc ccgtttctgg agaaatctct gcgcgatcag cactggtggg tccgcttcta
    10981 tgccgccacc gcactctctg aggcgggacc gcgcggtgag gaaatcctcc atcaggccct
    11041 gcgcgatccc gacgcaccgg tgcggggcat ggcacggtat ctcctggagc ggggcggcgc
    11101 cgtccccgtg ttgccgtgat gtggcccggg ttggaagcag ctctcctggg gtacgccgga
    11161 ttcatgc
//
LOCUS       DASYRV010000255         2712 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3375559, whole genome shotgun sequence.
ACCESSION   DASYRV010000255 DASYRV010000000
VERSION     DASYRV010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2712
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3375559"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(85..1623)
                     /locus_tag="VGQ24_06605"
     CDS             complement(85..1623)
                     /locus_tag="VGQ24_06605"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEV8454542.1"
                     /translation="MDVTSAMRRAATFFADREAVVHGGDRLTFARAWERGCRMANGLI
                     ALGLEPGDRVAVLEDNSKEAADFFLGAGIANLVRVPLYPRNSREAHLHMVGHTGCKAL
                     VVGGSHAPDVADFTQHLPDLRHVLVRDQTYEVWLAQQSPEDPMLRIRPEDPYIIRHTG
                     GTTGRSKGVAYTHKAWLACNRDWFYHYPPVEPGDKCLHLGPISHGSGYLFVPIWLGGG
                     CNVMVDKFEPSAVVEIMEREGIAYLFAVPTIVNVLNHEPTVRTRNWSKLKCMLIAAAP
                     ISDMTALTAHEIFGDRIYQGYGQTEVLLLSFMGPRQWFAEVEGSAPLRSCGLVMPFAD
                     VEIWDERNQPVPLGTPGQIVARADGQMTGFWNDPEGTKERLVDGWVLTGDIGMIDRNG
                     YLYLLDRADDMIISGGFNIWPMELENAIASHPGVMEVAVFGIPDPRWGETPCAVVVPK
                     PGTHVAEAEVAQLCIDQLGSYKKPGRVVIRDEPLPKTPVGKIKRRDLREPYWAGHTRR
                     VAGS"
     gene            1693..1842
                     /locus_tag="VGQ24_06610"
     CDS             1693..1842
                     /locus_tag="VGQ24_06610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454543.1"
                     /translation="MRMPLAARSQREGLAYTWIRPSVVPFYLNRNGQAITLTRELLDE
                     GVKRA"
     gene            complement(1938..>2712)
                     /locus_tag="VGQ24_06615"
     CDS             complement(1938..>2712)
                     /locus_tag="VGQ24_06615"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEV8454544.1"
                     /translation="AGIFMFIIAIAAKIWPNVAPREAPPSWRVRFLGLLSLFPVIALM
                     FIVLGTIYLGIATPTEAAAFGVVASLVLAGQAREVSVPMLKKVMVTTVQASSMIMLIV
                     TSAFIMSFALAILGVPAQLTQLVSGWNLTPVTFVLVLVVFYLILGTFMEALSMMVTTM
                     PILVPVLKSMNVDLVWFGIIMVILLEAALVSPPEGLNLYIIQGIRKSVSEDAGLKVGT
                     MLDLWIGVLPFMVGMAICIALLLFFPGIALWLPNLVMGK"
BASE COUNT          463 a          915 c          924 g          410 t
ORIGIN      
        1 ccgccctcgg cctctacggc cacggtcagg ggtccgggtg cgaggacgaa ggatcgccgt
       61 gccccctcct ccgcctcagc atggtcagct tcccgccacg cggcgggtgt ggcccgccca
      121 gtagggctcg cggaggtcgc ggcgcttgat cttgccgacg ggcgtcttgg gcagtggctc
      181 gtcgcggatc accacgcggc ccggcttctt gtaggacccg agctggtcga tgcagagctg
      241 ggcgacctcc gcctcggcca cgtgcgtgcc cggcttcggc accacgacgg cgcagggcgt
      301 ctcgccccag cgcgggtcgg ggatgccgaa gaccgccacc tccatgaccc cggggtggct
      361 cgcgatggcg ttctcgagct ccatcggcca gatattgaag ccaccggaga tgatcatgtc
      421 gtcggcgcgg tccagcaggt agaggtagcc gttccggtcg atcatgccga tgtcgccggt
      481 gagcacccac ccgtcgacca ggcgctcctt cgtgccttcc gggtcgttcc agaagccggt
      541 catctgcccg tcggcgcggg cgacgatctg cccgggcgtg cccaggggca ccggctggtt
      601 gcgctcgtcc cagatctcga cgtcggcgaa gggcatgacg aggccgcagg accgcagggg
      661 ggcggagccc tccacctcgg cgaaccattg ccgcggcccc atgaacgaca gcagcagcac
      721 ctcggtctgg ccgtatccct ggtagatgcg gtcaccgaag atctcgtgcg cggtgagcgc
      781 ggtcatgtcc gagatcggcg ccgccgcgat cagcatgcac ttgagcttcg accagttccg
      841 cgtgcgcacc gtgggctcgt ggttcagcac gttgacgatc gtcggcaccg caaacaggta
      901 ggcgatgccc tcgcgctcca tgatctcgac caccgcggac ggctcgaact tgtccaccat
      961 cacgttgcag ccacccccga gccagatcgg cacgaagaga tagccggagc cgtggctgat
     1021 cgggcccagg tgcaggcact tgtcgcccgg ctccacgggc gggtagtggt agaaccaatc
     1081 gcggttgcag gccagccagg ccttgtgggt gtaggcgacg cccttgctgc gcccggtggt
     1141 gccgccggtg tggcggatga tgtaggggtc ctccggacgg atcctcaaca tcgggtcctc
     1201 cggcgactgc tgggcaagcc agacctcata ggtctggtcg cgcaccagga cgtggcggag
     1261 atcggggagg tgctgcgtga agtccgccac gtccggcgcg tggctgccgc cgaccaccag
     1321 cgccttgcag ccggtgtgcc cgaccatgtg caggtgcgcc tcgcgcgagt tccggggata
     1381 gagcggcacg cgcaccaggt tggcgatgcc cgcgcccagg aagaagtccg cggcctcctt
     1441 ggaattgtcc tccagcaccg cgacgcggtc cccgggctcg aggccgagag caatcagtcc
     1501 gttcgccatg cgacagccgc gctcccaggc ccgggcgaag gtcagccggt ccccgccgtg
     1561 cacgaccgcc tcgcggtcgg cgaaaaacgt cgcggcacgc cgcatcgcgc tcgtcacgtc
     1621 catggcgtcc tccccgtccg cgtggcgctc agggctcacg ctagctaggc cccggcggag
     1681 gttgctgtca aggtgcgtat gccgctcgcg gcgcgctcgc agcgcgaggg gctcgcctat
     1741 acttggatca gacccagtgt ggttcccttc tatctcaacc gcaacggcca ggccatcacg
     1801 ctgaccaggg aactcctgga cgagggcgtg aagagagcgt agccaacatt accggggtcc
     1861 tggagcaggc cggggaggcc gagcgcgggg gccgggccgg catcgccgct ggcacagcga
     1921 ccgcgacgct gacggggtca cttccccatc acgagattcg gtaaccagag ggcgatcccc
     1981 gggaagaaca gcaggagcgc gatacagatc gccatcccca ccatgaacgg gagcaccccg
     2041 atccagaggt cgagcatcgt cccgaccttc agcccggcgt cttcggacac cgacttgcga
     2101 atcccctgga tgatgtagag gttgaggcct tccggcggac tgacgagggc cgcctccagc
     2161 aggatcacca tgatgatgcc gaaccagacc aggtcgacgt tcatcgactt caggaccggc
     2221 accaggatcg gcatggtcgt caccatcatc gagagggcct ccatgaaggt gccgaggatc
     2281 aggtagaaga ccaccaggac gagcacgaag gtgaccggcg tgagattcca tcccgacacc
     2341 agctgggtga gctgcgcggg gaccccgaga atcgccagcg cgaagctcat gatgaacgcc
     2401 gaggtcacga tgagcatgat catggaggac gcctgtaccg tcgtcaccat gaccttcttc
     2461 agcatgggaa cgctgacctc gcgggcctgg cccgcgagga ccagactcgc gacgacgccg
     2521 aaggccgcgg cttccgtggg cgtggcgatc cccagataga tcgtgcccag tacgatgaac
     2581 atgagggcga tcacggggaa gagcgacagg agtcccagga agcgcacccg ccacgacggc
     2641 ggcgcctcgc gcggcgccac gttcggccag atcttcgcgg cgatggcgat gatgaacatg
     2701 aagatgccgg cg
//
LOCUS       DASYRV010000256         4320 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_934156, whole genome shotgun sequence.
ACCESSION   DASYRV010000256 DASYRV010000000
VERSION     DASYRV010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4320
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_934156"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..269)
                     /locus_tag="VGQ24_06620"
     CDS             complement(<1..269)
                     /locus_tag="VGQ24_06620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454545.1"
                     /translation="MNTRIVLAAGLLGVGAYPAAAQQPTVNVRVVQGLPSRYLPPTCG
                     LKAGHYKVSSGATYLKTGVETAVPANKTRALASGQKVLLEAIQQNG"
     gene            complement(293..1585)
                     /gene="larC"
                     /locus_tag="VGQ24_06625"
     CDS             complement(293..1585)
                     /gene="larC"
                     /locus_tag="VGQ24_06625"
                     /EC_number="4.99.1.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarC"
                     /protein_id="HEV8454546.1"
                     /translation="MPDGRFAVLDPVAGISGDMLLGALLAAGASPEWLRGLPTRLGFP
                     DVTIDIRSVDRSGVRATQVTVVLPDGAHEEPAELAAPHDHDLHDRQHQDHAHPSGHGP
                     HRYIGELVAIIERAKLSPWVRERAVQVFELLGQAEGRVHGLPADRVALHEVGAVDALV
                     DVVGGIEGFEQLGVTRVYNRPVALGSGWVHAAHGTIPVPAPATSILLEGLEIGPNGPV
                     VGEATTPTGAALLRVLSSGAPPARWRAIAAGAWGAGGRNPRNYPNALRLILASAAVEA
                     GEVVLLSTDLDDLSPEYLDPLREALFAAGAIDVQVWATQMKKGRVGFRIEVTAAPAQA
                     DQAAAALFRHSTTSGIRRHTAERVTLARREVEVTSADGSTVRVKVLEGPDGPRVKPEY
                     EDVAAVARRTGQPAHEVARDLHYRALRLVSTDKTPPGL"
     gene            complement(1606..3453)
                     /gene="uvrC"
                     /locus_tag="VGQ24_06630"
     CDS             complement(1606..3453)
                     /gene="uvrC"
                     /locus_tag="VGQ24_06630"
                     /inference="COORDINATES: protein motif:HMM:NF001824.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEV8454547.1"
                     /translation="MGSKRALIAVTSPPIPETLQRKLDTLPEGPGVYLWKSVEGDVLY
                     VGKAKRLRSRVRSYFAGDFPDSPRNRLLQRLIADVETIVVPSEPGSLILENNLIKEYR
                     PRFNVRLKDDKSYPSIAVTLAEPFPRVLVTRKRDIPGARYFGPYTDVGQLRRTLAIIR
                     RLYTVRSCQDKLPEDRRERPCLDYYIGRCRAPCMGWQDMPDYQRMVEDVVDFLEGRTQ
                     DVRIKVREAMLQASEREDFERAREMRDALRWLDRLDEPAAVEVIGTGNADVVGYARDG
                     DDAVGVLIRVRAGRVVGREHRFLEGVEEEEDGAVLSAFLVRYYVPAEGRVRRLVVPFA
                     PDEWDTLRQLIPDTDWVVPQRGTAQRWLELADQNARHLLESLRIESFETDERAEDPVY
                     ALGRDLGLSVVPRSFVCVDISHNQGRDTVGSLVWFEAGRPRKGEYRKFKIKGLGLQDD
                     FAAIQEVLTRYLTRRRDEQLPMPDLVVIDGGKGQLNAALEAAAQLGLPALPMVSLAKR
                     EEEVFLPGRSESLRLSRRSPSLRLLQRARDEAHRFGLAYNRKRRTQRTITSELLSIPG
                     VGPTKRRRLLERFGSLAGVRSASTAELASVPGFSTRLAERILEHLKDGR"
     gene            complement(3432..>4320)
                     /locus_tag="VGQ24_06635"
     CDS             complement(3432..>4320)
                     /locus_tag="VGQ24_06635"
                     /inference="COORDINATES: protein motif:HMM:NF015013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lipid II flippase MurJ"
                     /protein_id="HEV8454548.1"
                     /translation="TVVRNFLPVFIGRGVVQISAYVDTVLASFLPTGAVAALSYAQVL
                     YTLPVSLFGMSVSAAELPAMSSTGGEADERAAHLRGRLDRGLRQIAFFVVPSAVAFLA
                     LGDVVAGAVYQSGAFTRDMTIYVWGILAGSAVGLLASTLGRLYASTYYALHDTRTPLR
                     FAMVRVVLTVVLGYLFAIPLPGLLGIDQRWGVAGLTASAGLAGWVELILLRRALNTRI
                     GPTGVPLSYMIKLWSGGLAAASAAWVVKLAFYPGHPLLVALFSLGMYGAAYFAVAASL
                     GVPQAVRLIAKIGWDRSAR"
BASE COUNT          749 a         1467 c         1391 g          713 t
ORIGIN      
        1 ccgttctgct ggatggcttc gagcagcacc ttctgaccgg acgcgagcgc tcgggtcttg
       61 ttggccggca ccgcggtctc gacacctgtc ttcagatacg tcgccccgct gctgacctta
      121 tagtgtcccg ccttcaggcc gcacgtgggg ggcaggtatc tcgagggtag tccctgcacc
      181 acccgaacat tgacggtggg ctgctgcgcg gcagccggat aggctcccac tcccaacaga
      241 ccggcagcca acacgattct ggtattcact cgtcacgact cctttttcgg gatcagagac
      301 cgggcggcgt tttgtcggtg ctcaccaggc ggagtgcccg gtaatgcaag tcccttgcca
      361 cctcgtgggc cggttgcccg gtacgtcgcg caaccgcagc tacatcttcg tattccggct
      421 tgacgcgcgg gccgtccggg ccctccagaa ccttgactcg aacggtgcta ccgtccgcgg
      481 aggtgacctc gacttcgcgc cgggcgaggg tcacccgttc cgccgtatgg cgccggatac
      541 cggacgtggt actatggcgg aacagcgcgg cggcagcctg gtcggcttgc gccggtgcag
      601 cggtcacctc tatccggaaa ccgacgcggc ccttcttcat ctgggttgcc catacctgaa
      661 cgtcgattgc gcccgccgcg aagagcgctt cacgcagggg gtcgaggtat tccggactca
      721 ggtcgtccag gtcggtggac aggaggacga cttctccggc ttcgacggcc gccgatgcca
      781 agatcagtcg tagcgcgttc gggtagtttc tcgggttgcg accacccgcg ccccacgccc
      841 ccgccgcaat ggctcgccac cgcgccggtg gcgctcccga cgagaggact ctgaggagcg
      901 ctgcgccggt gggcgtggtg gcctccccga ccaccggccc attgggcccg atctccagcc
      961 cttccagaag aatagaggtc gcgggagccg gcaccggaat agtcccgtgc gctgcgtgga
     1021 cccacccgct ccccagggca actgggcggt tgtagacccg ggtgacgccg agctgctcga
     1081 acccctcgat ccccccaacg acgtccacta gagcgtctac cgcgcccacc tcgtggagag
     1141 ccacccggtc ggcgggcagc ccgtggaccc gtccttccgc ctggcccagc agctcaaata
     1201 cctgcaccgc tcgttcccgc acccaaggcg acagcttcgc ccgttcgatg atcgcgacca
     1261 gctcacctat ataccggtga ggaccgtggc cggagggatg tgcatgatcc tggtgctgac
     1321 gatcgtgaag atcgtgatcg tgtggtgcgg cgagctcggc aggttcttca tgagctccgt
     1381 ccggcagcac tacggtcacc tgggtggccc gtaccccgga gcggtctact gatctgatat
     1441 cgattgtgac gtccgggaag cccagccggg tgggaagccc cctcagccac tctggcgacg
     1501 cgccggccgc cagcagcgca ccgagcagca tgtcgccact gatgccggcg accggatcca
     1561 gaacagcaaa gcgtccatcg ggcatagact tagaaatata ccgcgttacc gcccgtcctt
     1621 caaatgttcg agaatccgtt ccgcaagccg agtcgagaag ccgggtaccg aggcgagctc
     1681 agcagtcgac gccgacctga cgccggccag actcccaaac cgctcgagca gtcgtcgtcg
     1741 tttggtgggg cccacgcccg ggatgctgag cagctcggat gtgatggtgc gctgggttcg
     1801 ccgcttccgg ttataggcga gtccgaagcg gtgggcctcg tcccgcgccc gctggagcag
     1861 ccggagcgat gggcttcgcc gggacagccg aaggctctcc gacctgcccg gcagaaacac
     1921 ttcctcttcc ctcttggcga ggctcaccat cgggagagcg ggaagtccca gttgcgcggc
     1981 cgcctccagc gccgcgttga gttgaccctt gccgccgtcg atcaccacca ggtccggcat
     2041 cggcagctgc tcgtcccgac gccgggtcag atatcgggtg agaacctctt gaatggcggc
     2101 gaagtcgtcc tgcaggccaa gccccttgat cttgaacttc cggtactcgc ccttgcgggg
     2161 gcgtcccgcc tcgaaccaca cgagcgatcc gaccgtgtca cgcccttgat tatgcgagat
     2221 gtccacgcag acgaaactgc gcggcacgac actcagcccg agatctcggc ccagcgcata
     2281 cacggggtcc tcggcgcgtt cgtcggtctc gaatgattcg atgcgaaggc tctccaagag
     2341 atgccgcgcg ttctggtcgg ccagctcgag ccagcgctgt gccgttcccc gctggggcac
     2401 cacccagtcc gtgtccggga tcagctggcg cagggtgtcc cattcgtcgg gggcgaacgg
     2461 gaccaccagc cggcgtacgc ggccttcggc aggcacgtag tagcgcacca ggaatgcgct
     2521 caggacggca ccatcttctt cttcttccac gccctcgagg aatcggtgct ctcgcccgac
     2581 aactcgccca gcccgcaccc gaatgagcac gcctacggca tcgtctccgt cccgagcata
     2641 gccgaccaca tcggcgttcc cggtccctat gacctcgacg gcggccggct cgtcgagccg
     2701 gtcgagccag cgtagtgcat ccctcatctc cctggcgcgt tcgaaatcct cccgctcgct
     2761 ggcctgaagc atggcctcgc gcacctttat ccgaacgtcc tgggtcctgc cctcgaggaa
     2821 gtcgaccacg tcctccacca tgcgctgata gtccggcata tcctgccacc ccatgcaggg
     2881 agcgcggcag cggccgatgt agtagtccag gcaggggcgc tcccgacggt cctcggggag
     2941 cttgtcctga cagctgcgaa cggtgtagag ccggcggatg atggcgagcg tgcggcgcag
     3001 ctggcccacg tcggtgtaag gtccgaagta gcgggcgccg gggatgtctc gtttccgggt
     3061 caccagaacc cgcggaaacg gctcggcaag ggtgacggcg atggagggat agctcttgtc
     3121 gtccttaagg cggacgttga agcggggacg gtactccttg atgaggttgt tctcgaggat
     3181 gagcgagccc ggctcgctcg gcaccacgat ggtttcgacg tcggcgatga gccgctggag
     3241 caatcggttc ctcggactat ccgggaaatc cccggcgaag tagctgcgca cccggctccg
     3301 caggcgcttg gccttgccga cgtagagcac gtctccttcc acactcttcc agaggtacac
     3361 acccggcccc tccggaaggg tgtcgagctt ccgctggagg gtctctggaa tggggggact
     3421 ggtcacggct atcagcgcgc gcttcgatcc cacccgatct tcgctatgag gcggaccgcc
     3481 tggggaacgc ccaggctggc ggcgaccgcg aagtaggcag caccgtacat acccagggaa
     3541 aataatgcca ccaacagcgg gtgcccggga tagaatgcga gcttcaccac ccatgcggcc
     3601 gacgcggcgg cgagcccgcc gctccacaat ttgatcatgt acgacagcgg cacgcccgtc
     3661 gggccgatcc gggtattgag ggctcgccgg aggagtatga gctcaaccca gccggcgaga
     3721 ccggcggatg cggtgagccc ggccaccccc caacgctgat cgatgcccag gagcccgggc
     3781 agaggaatcg cgaagaggta cccgaggacc acggtgagaa cgacgcgaac cattgcgaag
     3841 cggagcgggg tcctcgtgtc gtggagggcg tagtaagtgg acgcgtagag ccgacccaac
     3901 gtcgaggcga gcagcccaac cgccgagcca gcgaggatcc cccacacgta gatcgtcatg
     3961 tcccgggtga aggcgccgga ctggtagacg gcacccgcca ccacgtcccc cagcgccagg
     4021 aatgccaccg cggagggaac cacgaagaac gcgatttggc gaagtccccg atccaggcgg
     4081 ccccgcaggt gggctgcgcg ctcgtcggcc tcgccaccgg tactcgacat ggccggcagc
     4141 tctgccgcag acaccgacat gccgaacagg ctcaccggca gggtatagag cacttgggcg
     4201 taagagagcg cagcgaccgc gccggtcggc agaaagcttg cgagcacggt gtccacgtag
     4261 gcgctgatct gaaccacgcc ccggccgatg aagaccggga ggaagttacg cacgacggtt
//
LOCUS       DASYRV010000257         2600 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1089780, whole genome shotgun sequence.
ACCESSION   DASYRV010000257 DASYRV010000000
VERSION     DASYRV010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2600
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1089780"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..379)
                     /locus_tag="VGQ24_06640"
     CDS             complement(<1..379)
                     /locus_tag="VGQ24_06640"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HEV8454549.1"
                     /translation="MKPAPFDYRRPETLEEALAILAELGSDAKALAGGQSLVPAMNFR
                     LARPAVLVDLNRLDPLAYIAETPDGGLRIGAMTRQRAAERSPAVARRASLLFEAMPWI
                     AHPQIRNRGTVGGSLAHADPAAEL"
     gene            complement(628..>2600)
                     /locus_tag="VGQ24_06645"
     CDS             complement(628..>2600)
                     /locus_tag="VGQ24_06645"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEV8454550.1"
                     /translation="AVEDIMVDAEPLEATVDLERALAPDAPVIHESIGSNLAAHAVQR
                     KGEYPAARSKAALVISRRFHYDRGASAAIETRGVVAAWDANAEQLTIWDTTQAPIPIR
                     NGLAAMLGLLESQVRVIAPFIGGGFGPKIMMFYPEEVLLPWAAIRLGRPLKWIEDRLE
                     SFTATTQERGQIHDAELAVDSEGRILGVRDSFLHDTGAYDTYGLTVPINSQCTLLGPY
                     RVPTYESEFKVCFTNKTLVTPVRGAGRQHGVFVMERLLDLAARKLGIDRVEIRRRNYL
                     RPDDFPHNHGILFQDSAPLVYDSGDYLPALEEAARIVDYDRFVREVQPGLRAKGRRVG
                     VGIVSYVEGTGIGPYEGARVTVEPSGKVRLATGVGTQGQGHFTTFAQIVAEVLGVAVS
                     DVHVITGDTGVFPWGTGTFASRGAVVAGSACYAAAQAVRTKAIALAAERLKVDQSCLE
                     LAHGRVAVAGDLTRGIGLGELARLANPLRGAVRPGTEPGLEATAYFGPDRGSTASGVH
                     AMEVEVDPETAMVRITRYVVVHDCGRVINPLIVEGQIQGGVAHGIGNAFYEQLRYDES
                     GQLMNASFMEYLLPTASEVPLVEIAHRQTPSPLNPLGVKGVGEAGCIPTGAAFAQAVE
                     DALGDPEFEILEIPLSPNRLYELMQRTEKDRL"
BASE COUNT          447 a          887 c          814 g          452 t
ORIGIN      
        1 gcagctccgc agccgggtcg gcgtgagcca ggctgccacc cacggtgccc cgattccgaa
       61 tctgcgggtg tgcgatccac ggcatcgcct cgaagagcag ggaggcccgg cgcgcgacag
      121 caggacttcg ctcggcggct cgctgtcggg tcatggctcc aatccgcagt cctccgtcag
      181 gcgtctcggc gatgtacgcc agtgggtcga ggcggttcag gtccaccagc accgccggcc
      241 gcgccagccg gaagttcatc gcgggaacca ggctctggcc tccggcgagc gccttggcgt
      301 cgctccccag ctcggctaag atggccagcg cttcctcaag cgtttccggc cggcgatagt
      361 cgaacggggc aggcttcacg aacttatccc caccgcccca ccctttttac cacgaaggca
      421 cgaaggtcac gaaggacacg aaggaaaacg acagatgagg tagtagtggt catgatttca
      481 acatcccaac tcggtggaac cgaaagtgac gatgaaaacg gagctacatc agaaaggcca
      541 caacactttg cacttcttcg tgaccttcgt gtccttcgtg ccttcgtgtt gaagtagcac
      601 cggagtatgg cgttgcaagg agtccgttca cagacgatcc ttctcagttc tctgcatcag
      661 ctcatacagc cggttgggac tcaagggtat ttccagaatc tcgaactccg gatcgcccag
      721 cgcgtcctcc accgcctggg caaacgccgc cccggtagga atgcaccccg cctcccctac
      781 gcctttcacg cccagcgggt tcagtggtga aggggtctgg cgatgggcga tttcgacgag
      841 gggaacctcg gaggcggtcg ggaggagata ctccatgaac gaggcattca tgagctggcc
      901 gctctcgtcg tatcgcagct gctcgtagaa cgcgttgccg atcccgtgcg ccacgcctcc
      961 ctggatttgt ccctcgacga tgagcggatt gatcacccgg ccgcagtcgt ggaccacgac
     1021 gtatctggtg attcgcacca tggccgtttc cgggtccacc tcgacctcca tcgcgtgaac
     1081 tccgctggcc gtgctccccc ggtcaggacc gaagtaggcc gtggcctcga gacccggctc
     1141 ggtgccgggg cgtacggcac cgcgcagcgg attggccaat cgcgccagct caccgagacc
     1201 aattccgcgg gtgagatctc ccgccacggc aaccctgcca tgcgccagct cgaggcagga
     1261 ctggtccacc ttcagccgct ccgctgccag ggcgatcgcc ttggtgcgca ccgcctgcgc
     1321 ggcggcatag cacgcgctgc ccgccacgac cgcccctcga ctggcgaagg tgccggttcc
     1381 ccaggggaag acgccggtgt caccggtgat cacgtgcaca tcgctcacgg ccacgccgag
     1441 cacttcggcc acgatctggg cgaacgtggt aaagtgaccc tgtccctggg tgcccactcc
     1501 ggtcgcgagc cgcaccttgc cactcggctc caccgtcacc cgcgcaccct cgtacggacc
     1561 gatccccgtc ccctccacgt aggagacgat gcctactcct acccggcgac ccttcgcgcg
     1621 tagtccgggc tgcacctcgc ggacaaaacg atcgtaatcc acgatgcgag cggcttcctc
     1681 taatgcgggg agatagtcgc cgctgtcgta caccagcgga gccgagtcct gaaacaggat
     1741 gccgtggttg tggggaaagt cgtcgggccg gaggtagttc cggcggcgaa tctcgacccg
     1801 gtcgatgccg agcttccgcg cggcgaggtc gagcagccgt tccatgacga agacgccgtg
     1861 ctggcgaccg gcgcctcgca ccggcgtcac cagggtcttg ttggtgaagc aaaccttgaa
     1921 ctcgctttcg taagtcggca cccggtaggg ccctagcagg gtacactgac tgttgattgg
     1981 aaccgtgagc ccataggtat cgtaggcgcc ggtgtcgtgg aggaagctgt cccgcacccc
     2041 caggatccgg ccctccgaat ccactgccag ctcggcatcg tggatctgcc cccgctcctg
     2101 ggtggtcgcg gtgaagctct ccagccggtc ttcgatccac ttcagcggcc ggcccagccg
     2161 gatcgcggcc caggggagca ggacctcctc ggggtagaac atcatgatct tggggccgaa
     2221 gccgccgccg atgaacggag cgatgaccct cacctgggac tcgagcaggc cgagcatggc
     2281 cgcgagtccg tttcggatcg ggatcggggc ctgggtcgta tcccagatgg tcaactgttc
     2341 cgcgttggca tcccaggccg cgaccacacc ccgggtctcg atcgcggccg aggctccgcg
     2401 gtcgtagtgg aagcggcggg agatcaccag cgcggccttc gatcgagccg ccgggtattc
     2461 gccttttcgc tggaccgcgt gcgcggccag gttggagccg atcgactcgt ggatcaccgg
     2521 ggcatcgggc gccagcgcgc gctccagatc caccgtggct tccagcggct cggcatccac
     2581 catgatgtcc tccaccgcat
//
LOCUS       DASYRV010000258         5325 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_310010, whole genome shotgun sequence.
ACCESSION   DASYRV010000258 DASYRV010000000
VERSION     DASYRV010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5325
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_310010"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1457
                     /locus_tag="VGQ24_06650"
     CDS             <1..1457
                     /locus_tag="VGQ24_06650"
                     /inference="COORDINATES: protein motif:HMM:NF019592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HEV8454551.1"
                     /translation="SSYRAFLAKVYTGLTVTGQRGAAGQPDLDPSFDEGFSSYLRLYW
                     EAQELPTDEAVIGWNDTGIEELNTQLWGVTNGFLNIMYYRIFFQIGMANEFLRQTTDA
                     KLASRGHTSPALQAEVATYRAEARFLRALSYWHGLDLYGNIPLVTDADVLGATPPQQA
                     SRAELFDFVVNELNEIQGELPAVSAANYGRATGPAASMLLAKLYLNAGVYTGTTKYAE
                     ALAAAQAIIGNSAYSLDNNYQDIFLADNNTSPEIIFSVPQDGLKTQTWGGMTFLVHAA
                     CGNQMNPADYGIDGCWWGLRLKPEAYNRYTTGDKRDDFFFTTGQTVAVTAIGDFTKGI
                     PAPKYRNITSTGAQGSHPTFPDTDYPMFRLADAYLIYAEAHLRGGGGSATQALTYVNA
                     LRQRAWGNANGNITAGQLTLDFILDERGRELLWEANRRTDLVRYGRYTGGTYLWAWKG
                     GVQAGTGTPDHLNLYPLPGNELIANPNLTQNPGY"
     gene            1505..3139
                     /locus_tag="VGQ24_06655"
     CDS             1505..3139
                     /locus_tag="VGQ24_06655"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family protein"
                     /protein_id="HEV8454552.1"
                     /translation="MAEPWIARFLRPSPVPHHRTAALPHCLAAALTVACGGGNLPTPP
                     PGTPPNTERPSLAATYRPSGHLAAGDVFVHLFEWKWTDIAAECENVLGPAGYHAVQVS
                     PPQEHSLEPPNYPWSERYQPVSYSIARSRSGTGAEFADMVNRCKAAGVGIIVDAVINH
                     MTNFPSPGIGSNGTAYSKYEYPGLYTQADFHTPCPITNYQSAANVQDCELFSLPDLNT
                     GLASVRQKIAEYLLMHARLGVAGFRIDAAKHIQQVELDDIIGRVNRTLAGEGRPLPYF
                     FLEVIAGAGEALAERDYFGEGYSSGGAADITEFTFVGVGDKFRGIGGQRIAQLNPNGS
                     AGNQFSESAWGLIPSDKAVVFLQNHDTQHECGLSFRHGSVFRLANVWMLAQRYGYPSI
                     LSSYPFNCPSGNSQGPPSDPAGNTNNVSCAASLETATIGQWVCEHRDPYLRNMVSFRR
                     VVAGTDLNHWWDDGANAIAFSRGDKGFVALNNADASLAATVATGLPPGTYCDLLTGGL
                     VGTVCAGTSVVVDAAGMVQLNLAARSALAIDAATRQ"
     gene            3160..4731
                     /locus_tag="VGQ24_06660"
     CDS             3160..4731
                     /locus_tag="VGQ24_06660"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HEV8454553.1"
                     /translation="MAAVAALSCAPAAQLPDRPTARAWTAGATCYEVFVRSFSDSNGD
                     GIGDFNGLTAKLDYISDLGASCLWLMPVAESPSYHGYDVSDYYKVESDYGTADDFKRM
                     VAAAHRRDIKVLVDMVLNHASSEHPSFQAALSDTTSPYRAWYRFSPSDLGKGPWGAVA
                     WHKSPVRNEYYYGVFWSGMPDLNYDTRAVREEAKQVATYWLREMGVDGFRLDAVPYLV
                     EEGSCNTGCAGTHAFLHEYAAHLDSIAPEAYTVGEAWGNIARLLPYYPDQLTSYFAFE
                     LADSLVSAVRNGSAAGLFAGYLQLQDTLPPQRWSPLLSNHDGTRVKTMLGGDVAKARL
                     AGTLLLTLPGMPFVYYGEEIGMTGDKPDPRLRTPMQWKATRGLGFTSGTPWEAAQPDS
                     FTTTVEAQQADSNSLLNLYRRLIHLRKVNEALATGRLLPLVPGDPAVAAYLRRAGDHA
                     VLVVANLGTAAVSTVSLTGMNVLPPGRYEPRNLLSGPNGAVLEVSPEGSLRDYLPLPR
                     PLAPGESLVFELIRR"
     gene            4764..5012
                     /locus_tag="VGQ24_06665"
     CDS             4764..5012
                     /locus_tag="VGQ24_06665"
                     /inference="COORDINATES: protein motif:HMM:NF024759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEV8454554.1"
                     /translation="MKIVSPAFTDSFGIPPISSSADQLISLTRTNTYVDRDQADLDDR
                     TAQLLNYLRASRLHVGLFLNFGETAQFKRVVWIRSLPP"
     gene            complement(5050..>5325)
                     /locus_tag="VGQ24_06670"
     CDS             complement(5050..>5325)
                     /locus_tag="VGQ24_06670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454555.1"
                     /translation="RAFYRTVLGLARSDSAFLTGAFREVETSAPDAVIAYQRGDAIVL
                     VNTRPGEARVGITGFEVDGARDLLVSRVQRGATVILPGYGAVVLVRR"
BASE COUNT          945 a         1877 c         1589 g          914 t
ORIGIN      
        1 cgagctccta ccgcgccttc ctcgcgaagg tgtataccgg gcttaccgtc accggccagc
       61 gcggcgcggc cggacaaccc gacctggacc cgagcttcga tgagggcttc tcctcgtacc
      121 tccggcttta ctgggaggcc caggaactgc ccaccgacga agccgtgatc ggctggaacg
      181 ataccggcat cgaggagctc aacacgcagt tgtggggcgt gaccaacggg ttcctcaaca
      241 tcatgtatta tcgcatcttc ttccagatcg gcatggcgaa tgagttcctg cgccagacca
      301 ccgatgccaa gctcgcctcg cgcggccaca ccagccccgc gctgcaggcc gaagtcgcca
      361 cctatcgcgc cgaggcccgc ttcctgcgcg ccttgagcta ctggcacggg ctcgatcttt
      421 atgggaacat tccgctggtg accgacgcgg atgtgctcgg cgctaccccg ccacagcaag
      481 ccagtcgcgc ggagctcttc gacttcgtcg tcaacgagct gaacgagatt caaggcgagc
      541 tccccgcggt aagcgcggcc aattacggcc gcgccacggg accggctgca tctatgctgc
      601 tcgccaagct ctacctgaac gcgggcgtct acactggcac cacgaaatac gccgaggcgc
      661 tggccgcagc ccaggccatc atcgggaact ccgcctacag cctggacaac aactaccagg
      721 acatcttcct ggccgacaac aacacctcac ccgaaatcat tttctccgtc ccgcaagatg
      781 gcttgaagac ccagacctgg ggcggcatga cgttcctggt gcacgccgcg tgcgggaacc
      841 agatgaaccc ggcggactat ggcatcgacg gctgctggtg gggcctgcgc ctcaagcccg
      901 aggcgtacaa ccgctacacg accggcgata agcgcgacga tttcttcttc accaccggac
      961 agaccgtcgc agtaactgcc atcggcgatt tcaccaaggg gatcccggcg cccaagtacc
     1021 gcaacatcac atccaccggc gcccaaggct cgcatccgac gttccccgac acggattatc
     1081 cgatgttccg gctcgccgat gcctacctga tctacgccga ggcccacctg cgcggtggcg
     1141 gcggctccgc gacgcaggcg ttgacctatg tgaatgcgct gcgccagcgc gcctggggaa
     1201 atgccaacgg caatatcacg gccggccagc tcacgctcga cttcatcctc gacgagcgcg
     1261 gacgcgagct gctctgggag gccaaccgcc ggaccgacct cgtgcgctat gggcggtaca
     1321 ccggcggcac ctacctctgg gcgtggaagg gcggggtcca ggccgggacc ggaactccgg
     1381 accacctcaa tctctacccg cttccgggga acgagctcat cgcgaatccg aacttgaccc
     1441 agaaccccgg ctactagagc cggcctgaac tggtagtccg cgcttccaga gctccgccaa
     1501 gcaggtggcg gagccctgga tcgcgcgctt cctccgcccc tcgcccgtgc cccaccaccg
     1561 cactgccgca ctgccgcact gcctcgctgc cgcacttact gtggcctgcg gtggtggcaa
     1621 cctcccgacc ccgcctcccg gcactccgcc caatacggag cggccgtcgc tcgcagcgac
     1681 ctaccggccc agcggccacc tggccgcggg agacgtcttc gtccacttgt tcgagtggaa
     1741 gtggaccgac atcgccgccg aatgcgagaa cgtgctcggc ccggctggct accacgccgt
     1801 gcaggtctcg ccgccgcagg aacacagtct cgagcccccc aactacccgt ggagcgagcg
     1861 ctaccagccg gtgagctaca gcattgcgcg gagccgctcg ggcaccgggg cggagttcgc
     1921 ggacatggtg aaccgctgca aggcggccgg cgtgggcatc atcgtggacg cggtgatcaa
     1981 ccatatgacc aacttcccga gccctggcat cgggagcaac gggaccgcct actcgaaata
     2041 cgagtatcct ggcctctaca cccaggcgga tttccatacg ccctgcccga tcaccaatta
     2101 ccagagcgcc gccaacgtac aggactgcga gttgttctcg ctgccggacc tcaacacggg
     2161 gctggcttcg gtgcgccaga agatcgccga gtatctgctc atgcacgcgc ggctcggcgt
     2221 ggccggcttc cggatcgatg cggccaagca tattcagcaa gtggagctcg acgacatcat
     2281 cggccgggtc aaccgcacgc tcgccggaga aggccggccg ctgccctact tcttcctcga
     2341 ggtcatcgcg ggagcaggcg aagcgcttgc ggagcgcgac tacttcggcg aagggtatag
     2401 ctcgggcggc gccgccgaca tcaccgagtt caccttcgtc ggggtgggcg acaagtttcg
     2461 cggcatcggg gggcagcgga ttgcgcagct caaccccaac ggcagcgccg ggaaccagtt
     2521 ctccgagtcg gcatgggggc tgatcccctc ggacaaggcc gtggtgttcc tgcagaacca
     2581 cgatacccag cacgagtgcg gcttgagctt ccgccacggc agcgtcttcc gccttgcgaa
     2641 cgtgtggatg ctggcgcagc gctacggcta tccgtcgatc ctgtcgagct acccgttcaa
     2701 ctgtcccagc gggaactctc agggccctcc ttcggatccc gccggaaata ccaacaatgt
     2761 gagctgcgcc gccagcctcg aaacggccac catcggccag tgggtttgcg agcaccgcga
     2821 cccgtacctg cgcaacatgg tgagtttccg ccgcgtggtc gccggaaccg atctcaacca
     2881 ctggtgggat gacggcgcca acgcgatcgc tttctcccgg ggagacaagg ggttcgtggc
     2941 cctcaacaat gcggacgcaa gcctggccgc caccgtcgcg acgggcctgc cacccgggac
     3001 ctactgcgac ctcctgaccg gcggactcgt cggcaccgtc tgtgccggta cctcggtcgt
     3061 cgtagacgcg gccggcatgg ttcagctcaa tctcgcggcc cgttcggcgc tcgcgatcga
     3121 cgccgccacg cgtcaatgag gcctactcag tggttagccg tggcagccgt cgccgcgctc
     3181 tcctgtgccc cagctgccca actgcccgat cgcccaactg cccgcgcctg gacagctggc
     3241 gccacctgct acgaagtctt cgtccgctcg ttcagtgaca gcaacggcga tgggatcggc
     3301 gacttcaacg gcttgaccgc caagctcgac tacatctccg accttggcgc ctcctgcctc
     3361 tggctcatgc cggtggcgga atcgcccagc taccatggct acgacgtcag cgactactac
     3421 aaggtggagt ccgattacgg caccgcggac gatttcaagc gaatggtcgc tgcagcgcac
     3481 cggcgcgaca tcaaggtgct ggtggacatg gtgctcaacc acgcctccag cgagcatccc
     3541 tctttccaag ccgcgctctc ggacaccacc tcgccctacc gcgcctggta ccgcttctca
     3601 cccagcgatc ttggcaaggg gccgtggggc gctgtggcct ggcacaaatc tccggtgcgg
     3661 aacgagtatt actacggcgt gttctggagc ggcatgccgg atctcaacta cgacacccgc
     3721 gccgttcggg aggaagccaa gcaggtcgcg acctactggc ttcgcgagat gggcgtggat
     3781 ggcttccgcc tggatgcggt gccctatctc gtggaggagg gcagctgcaa cacgggatgc
     3841 gctggcactc acgccttcct gcacgagtac gccgcccacc tcgatagcat cgcgcccgag
     3901 gcgtatacag tgggcgaggc gtggggcaat atcgcgaggc tgcttcccta ttaccccgac
     3961 cagctcacct cctatttcgc cttcgagctg gccgactcac tcgtgtcggc ggtgcgaaat
     4021 ggctcggcgg ccggattgtt cgcgggatac ctgcagctcc aggatacgct tcccccgcag
     4081 cgttggtcgc cgctcctcag caaccacgac ggaacccgcg tcaagaccat gctcggcggg
     4141 gacgtcgcga aggccaggct cgcgggcacg ctcctgctta ccctccccgg catgccgttc
     4201 gtctactacg gtgaggagat cgggatgacc ggcgacaagc cggacccgcg gctgcggact
     4261 ccgatgcagt ggaaggcgac tcgcgggtta ggctttacgt ccggaacgcc ctgggaagcc
     4321 gcccagcccg attcgtttac gacgacggtc gaggcgcagc aggcggattc aaactccctg
     4381 ttgaacctct atcgccggct cattcatctg cgtaaggtga acgaggcact ggcgactgga
     4441 cggctgctgc cactcgtgcc aggcgatccg gcggttgctg cctacctgcg tcgcgcgggc
     4501 gaccatgctg tgctcgtggt cgccaacctg ggcaccgcag cggtctccac cgtctcactc
     4561 acaggcatga acgtgctgcc tcccggtcgc tatgagccgc gcaacctgct ctccggccca
     4621 aacggcgcag tgctcgaggt gagcccggag gggagcctgc gcgactacct gccgcttccc
     4681 cgccctctgg ccccaggcga gagcctcgtg ttcgagctca ttcgccgtta gaatgccttt
     4741 tcgtccctaa accgcacttc catatgaaga ttgtttcacc cgcctttacc gattctttcg
     4801 gaatcccgcc gatatcctcg tctgcagacc aactgatctc cctgacgagg acgaatacct
     4861 atgttgaccg cgaccaagct gaccttgacg accgtactgc tcaactcctt aactacctga
     4921 gagcttcaag gcttcacgtg gggctgttcc tgaatttcgg tgaaacggcc cagttcaagc
     4981 gcgtcgtctg gattcggagt cttccgccct gatccgccaa ctcagcggaa tccccgtctg
     5041 tttttttacc tagcgccgca cgagtacgac ggcaccgtag cccggcagga tgaccgtggc
     5101 accgcgctga acgcggctca cgagcaggtc gcgcgcgcca tccacctcga aacccgtgat
     5161 gccgacccgg gcctcgccgg gccgcgtgtt caccagcaca atcgcatcgc cgcgctgata
     5221 ggcgatcacg gcatcgggtg cgctggtctc cacttcgcga aatgcgcctg taaggaaagc
     5281 cgaatcgctg cgcgccagcc ccagtaccgt gcggtagaac gcgcg
//
LOCUS       DASYRV010000259         4294 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3790440, whole genome shotgun sequence.
ACCESSION   DASYRV010000259 DASYRV010000000
VERSION     DASYRV010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4294
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3790440"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..1763)
                     /locus_tag="VGQ24_06675"
     CDS             complement(45..1763)
                     /locus_tag="VGQ24_06675"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HEV8454556.1"
                     /translation="MKVLDSRRLTGPSLLLDRPGAILDISLEDLAADRAAPAWRRAAD
                     RLLQAVGWPAEELACRRFPGGVSLAFSAPVDCLYAATEVNETAWALAVSELALGPPVG
                     FEDQVAALRNTIAAERNHALVALHDATQARGLTFLIGEDQVSAGSGMGALVWPAESLP
                     EPGAVDWSRIHDIPVALITGSNGKTTVVRLLGAMVAAADRTPGMTSTDGVSVGSTFLV
                     EGDFSGPSGARVVLRRPEVETAILETARGGILRRGLPVNRADVAVITNVAADHLGEFG
                     VESLADLAETKLLVAKALGTSGTLVLNADDPLLVRRSGRIPARLTWFSLDPASPVVQR
                     HVDAGGTAVVEDGGCIVLAQGKQRSVVASVADVPITFGGTARHNVANALAAVAGATAL
                     GIGIELTALTLRRFGREPGDNPGRANLVELGGARILLDYAHNPHGMAALVGVAQTFPA
                     RRRLVMLGQAGDRNDEAIRELARAAWTLQPDRVVVKEMDQYLRGRAPGEVPALLADEF
                     SRLGAPDTAISRVGPDLEGVREALAWARPGDLLVLAVHQDRRAVLGLLSRLRATDWHA
                     GDPLPA"
     gene            complement(1771..>4294)
                     /gene="cphA"
                     /locus_tag="VGQ24_06680"
     CDS             complement(1771..>4294)
                     /gene="cphA"
                     /locus_tag="VGQ24_06680"
                     /EC_number="6.3.2.29"
                     /EC_number="6.3.2.30"
                     /inference="COORDINATES: protein motif:HMM:NF010623.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0051235 - maintenance of location [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cyanophycin synthetase"
                     /protein_id="HEV8454557.1"
                     /translation="VAGETVTFGKTRSNGPAGHYSVIYHYEQEDVGLEAGQLGLTLLH
                     SLLPIELRPEGSVPQGFDFAAERDEFIRFAQRRALGPSTMALVRAAEERRIPWIRLND
                     QSLIQFGHGRYQQRIQATVTSRTSHIAVELASDKEETNRMLGNLGLPVPQQRLVQQAD
                     DAVAAAERIGYPVVVKPYNANHGRGISIHLTDADQVRSAFELAREHSRSVIVESFITG
                     EDHRMLVINGELAAVAKRVPGHVVGDGTHTIEQLVDEVNQDPRRGVGHEKVLTRLVFD
                     HQAETLLAAKGYTRETVPATGETVFLRSTGNLSTGGTATDMTDLVHPDNIEMAVRAVK
                     AIGLDVGGVDFLSTDITESYKEVGGAICEVNAAPGFRMHMAPSEGTPRDVSGRVMDML
                     FPPGTPSRIPIAAITGTNGKTTTARMLTHIQKLAGHHVGLTSTDGVYIDGQRTVPGDM
                     TGPVATRMVLSDPSVDVSVLEIARGGLLRAGMGVRHCDVGAVLNVKADHLGLRGIGTV
                     EQLAEVKRIVVEIARDTAILNADDPLCLKMADYTEAKHLCYVTMNPTHELVGEHIQAG
                     GRGVVLESGIKGQMITIYDHGSHIPLLWTHLIPATLEGRAMHNVQNAMFAAAMAFSMG
                     LKLEDIRHGLRTFDTTFFQAPGRMNIYDEHPFKVILDYGHNPDAIQAMCELVDRLEVT
                     GRRLVVLAAPGDRRDEDIAEIGRIAAGRFARYFCRRDDQLRGRRPDEVPNLLREVLLA
                     SGVPADQILVIPEEAAAVDAALREADPGDLLLIFADAITRSWKQVIQFRPDAAPRLGE
                     RPRISRPEPVVAAVAIPMLEDRRREFVRDSRGVRLAREEHAD"
BASE COUNT          683 a         1477 c         1409 g          725 t
ORIGIN      
        1 ggaggtggta gctcttgctt gtagcagacg ggggggacca gccttcacgc cggcagcggg
       61 tcccctgcgt gccaatcggt tgccctgagc cggctgagca gtccgagcac ggcgcgacgg
      121 tcctgatgca ccgccagcac gagaaggtcc cccggacggg cccaggccag ggcctctctc
      181 actccctcga gatccggtcc tacccttgaa atggccgtgt ccggggcgcc gagccgggaa
      241 aactcgtctg ccaggagggc ggggacttca cccggtgcgc ggccccgcag gtattggtcc
      301 atctccttca cgaccacgcg gtccggctgc aacgtccagg cggcacgagc cagctcgcga
      361 atggcttcat cgttgcggtc gcccgcctgg cccagcatga ccagccggcg gcgtgcgggg
      421 aatgtttggg cgacaccgac cagggccgcc atgccgtgag gattgtgcgc gtagtcgagc
      481 aggattcgcg caccaccgag ctcgacgaga ttggcccgtc ccgggttgtc gccgggctcg
      541 cgaccaaacc gccgcaatgt cagagctgtc agctcgatgc cgataccgag cgcagtcgcg
      601 cctgccacgg ctgccagtgc gttggccacg ttgtgcctgg ccgttcctcc gaaggtgatg
      661 gggacgtcag ccactgaggc cacgacgctg cgctgcttgc cttgagcgag tacgatgcag
      721 ccgccgtcct ccaccacggc ggttccgccg gcatcgacgt gcctctgcac gaccggggag
      781 gctggatcga gtgaaaacca ggtcaggcgg gccggaatcc tcccgctccg ccgaaccagc
      841 agtggatcgt cggcgttcag caccagagtt ccgctcgtgc ccagtgcctt ggccacgagc
      901 agcttcgtct cggcaagatc ggccaggctc tcgaccccga actcgcccag atggtccgcc
      961 gcgacgttgg tgatcaccgc gacgtccgcc cgattcaccg ggagcccccg ccgaaggatg
     1021 ccgccgcggg cggtctccag gatcgcggtc tcgacctcgg gtctgcgcag caccacgcgc
     1081 gcgccgctgg gtccggagaa gtctccctcg acgaggaacg tgctgccgac ggaaactccg
     1141 tcggttgagg tcataccggg cgtgcgatcc gcggccgcga ccatggcccc aagcaggcgc
     1201 acgacggtgg tcttgccgtt ggacccggtg atcagggcca ccgggatatc gtggatccgc
     1261 gaccagtcca ccgctccggg ctcgggaagc gattcggctg gccacacgag cgcccccatt
     1321 cccgagccgg ccgagacctg gtcctcaccg ataaggaagg tcaggccgcg ggcctgggtc
     1381 gcatcgtgga gcgcaaccag cgcgtggttt cgctccgccg caatggtgtt cctcagcgca
     1441 gccacctgat cctcgaagcc gaccgggggt cccagggcga gctcgctcac ggcgagcgcc
     1501 catgcagttt cgttgacctc tgtggccgca tagaggcagt ctaccggcgc gctgaaggcg
     1561 aggctgactc ctccggggaa gcgccggcag gcgagctcct cagcaggcca cccgacggcc
     1621 tgaagcagcc ggtcggccgc ccgccgccat gcgggagcgg cacggtcggc ggctagatcc
     1681 tccagactga tgtcgagtat cgcgccgggc ctgtccagca acaggctcgg cccggtgagc
     1741 cggcgggaat cgagaacctt catggccgga ctagtcggcg tgctcctcgc gggccaggcg
     1801 tacgccgcgg gagtcccgga cgaactccct gcgccgatcc tccagcatcg ggatagccac
     1861 ggcggccacc accggctcgg ggcgggagat gcgcggtcgc tcgccaagcc ggggtgccgc
     1921 atccggccgg aactggatca cctgcttcca gctccgagtg atggcatcgg cgaaaatgag
     1981 tagcaggtcc cccggatccg cttcgcggag tgccgcgtcc accgccgccg cctcttctgg
     2041 gatgaccagg atctgatcgg cgggcacgcc gctcgccagg agcacctcgc gcaggagatt
     2101 gggcacctca tccgggcggc gaccccggag ctggtcgtcc cggcggcaga aatagcgtgc
     2161 gaagcggccc gcggcgatcc ggccgatctc ggcaatatcc tcgtcacgac ggtcacccgg
     2221 ggccgccagc accaccagcc gccttccggt gacctcgagc cgatccacca gctcgcacat
     2281 cgcctggata gcgtcgggat tgtggccata gtccaggatc accttgaagg gatgctcgtc
     2341 gtagatgttc atccggcctg gggcctggaa gaacgtcgtg tcgaaggtgc ggaggccgtg
     2401 acggatgtct tccagcttca ggcccatgct gaaggccatc gcggccgcga acatcgcgtt
     2461 ctgcacgttg tgcatggccc gcccctccag cgtcgccggg atcaggtggg tccagagcag
     2521 cgggatgtgg gagccgtgat cgtagatcgt gatcatctgg cccttgattc cggactcgag
     2581 gaccacaccg cgtccacccg cctgaatgtg ctcgccgacc agctcatgcg tggggttcat
     2641 ggtgacgtaa cagagatgtt tcgcctcggt gtagtcggcc atcttgagac agagcgggtc
     2701 atcggcattc aggatggccg tgtcgcgcgc gatctcgacc acgatgcgct tcacctcggc
     2761 gagttgctcc accgtgccga tgcctctgag ccccagatga tccgccttca cattgagcac
     2821 cgctccgacg tcgcagtgtc tcacccccat gcctgcccgg agcagcccac ccctcgcgat
     2881 ctccaagacg gagacatcga ccgaggggtc gctcagcacc atccgggtcg ccaccggacc
     2941 ggtcatgtca cctggcaccg tgcgctgtcc gtcgatgtag accccatcgg ttgacgtgag
     3001 acccacgtga tgaccggcca gcttctggat gtgggtcagc atgcgagccg tcgtggtctt
     3061 gccgttggtc ccggtgatcg ccgcaatcgg tattcggctc ggcgtgcccg ggggaaacag
     3121 catgtccatg actcggccac tcacgtcccg cggtgtaccc tcgctcggcg ccatgtgcat
     3181 cctgaacccg ggagccgcat tgacctcgca gatggctccg ccaacctcct tgtaggactc
     3241 ggtgatgtcg gtggagagga agtccacacc acccacgtcg aggccgatcg cctttacggc
     3301 ccggaccgcc atctcgatgt tgtcgggatg gaccaggtcc gtcatgtcgg tcgcggtacc
     3361 gccggtcgag agattcccgg tcgagcgcag aaagactgtc tcaccggtgg cgggcactgt
     3421 ctccctggta taccccttgg ccgcgagcag ggtctccgcc tggtgatcga acaccaatcg
     3481 ggtgagcacc ttctcgtgac ccacgccgcg ccgggggtcc tgattcacct cgtccaccag
     3541 ctgctcgatg gtatgggtac cgtctcccac gacgtgtccc gggacccgct ttgccaccgc
     3601 cgccagctcg ccgttgatca ccagcatccg gtggtcctcg ccggtgataa agctctccac
     3661 gatgacgctc cggctgtgct cccgggcgag ctcgaacgcg gaccgcacct gatcggcatc
     3721 agtgagatga atggaaattc cgcgtccgtg gttggcgttg tacggcttca ccacgacggg
     3781 gtacccgatc cgctccgcgg ctgcgaccgc atcgtcggcc tgctgcacca gccgctgctg
     3841 gggaactggg aggccaaggt tgcccagcat ccggttggtc tcctccttgt cggatgccag
     3901 ctcgaccgcg atgtgtgagg tgcggctggt gaccgtcgcc tggattcgtt gctggtagcg
     3961 gccgtggccg aactgaatca gactctggtc gttgagccgg atccagggta tccgccgctc
     4021 ttcggcagcc cggaccaacg ccatggtgct ggggccgagc gcgcggcgct gggcaaagcg
     4081 gatgaactcg tcccgctcgg ccgcaaagtc gaatccctgc gggaccgagc cttcgggtcg
     4141 cagctcgatc gggagcaatg agtgcagcag cgtaagcccg agctgacccg cctccagccc
     4201 gacatcctcc tgctcgtagt gatagatcac ggagtagtgc ccggcagggc cattcgaccg
     4261 ggtcttgccg aaggtgaccg tctcgcccgc cacg
//
LOCUS       DASYRV010000260         6467 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1553346, whole genome shotgun sequence.
ACCESSION   DASYRV010000260 DASYRV010000000
VERSION     DASYRV010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6467)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6467)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6467
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1553346"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            176..1270
                     /locus_tag="VGQ24_06685"
     CDS             176..1270
                     /locus_tag="VGQ24_06685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454558.1"
                     /translation="MYDLAVREEEWAAADTLIRRKFKDKVPLGDRLLFAIVRKDTAAQ
                     RLLRSEASSSAGQKGRKTKDLLLEAGWLLATYLEELDRAEEFARLGTSPSLPVGHRAS
                     AHELLGNLRVAGGRWTDAKTEFAAASRLAQPDSALVGRALAAALPFLAVPRRELETIR
                     AEVERWKPGADVSEPLPESVRPLAPHIRLYLLGLLSSRMGDARAALYHATELERQPVP
                     PDSRALMRDLARTIRADVAWVAGHKDEALAQLQDVRGEVPLALIRLPYFSQEHARYLR
                     SRLLRQEGREAEALELVEVGFRGTPNELQYRAPGHLLSAEINHRLGNRAAAAEHYSRF
                     IGLWRACDPALRPLVDGAKAELAKMVAEPR"
     gene            complement(1401..1811)
                     /locus_tag="VGQ24_06690"
     CDS             complement(1401..1811)
                     /locus_tag="VGQ24_06690"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEV8454559.1"
                     /translation="MPLIRQSGAIFVRLDTKEPKVLLVTAKRNPKTWIFPKGHVEKGE
                     TPAAAALREAKEEAGVSGKLIGPAGVLEYGFLGVKARVDYFLAVLTRETGPPEDGRSR
                     AWCGLDEALDRLSYKNTRKLLRKAWKKILLESGS"
     gene            complement(1925..2275)
                     /locus_tag="VGQ24_06695"
     CDS             complement(1925..2275)
                     /locus_tag="VGQ24_06695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454560.1"
                     /translation="MGTLVAGLKAVESVVSKKQYKRLIATAVAQLLTMHPDFGSGRAR
                     RRARKLVGAKPAKKMLVRPGKAGLKEGLETAAVAAAGGAVLKAAGKLGRKVTEKVKDA
                     VEAQKDGGQPAIHA"
     gene            complement(2678..3136)
                     /locus_tag="VGQ24_06700"
     CDS             complement(2678..3136)
                     /locus_tag="VGQ24_06700"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030638 - polyketide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HEV8454561.1"
                     /translation="MSAQSTLISQQQLVDAAKAPLIAFNEKDWDAVRASITSDFVYDE
                     VATHRKVQGVDQVIPLWQGWATAFPDARATFHRALPSDGTVVLELTWQGTHKGPLQTP
                     KGAIAATEKSIEIRSCVVTEIAGDKAKLQRHYFDMATMLHQLGVDQLSRS"
     gene            3908..>6467
                     /locus_tag="VGQ24_06705"
     CDS             3908..>6467
                     /locus_tag="VGQ24_06705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="protein ndvB"
                     /protein_id="HEV8454562.1"
                     /translation="MAEAGDVGPAGEWLLDNYHVVQEHIGEVRESLPRGYYRELPELG
                     GGPLAGYPRVYELAITLISHTEGRVDLDNVTGFVAAFQRVSALTVGELWAVPAMLRLG
                     LIENVRRMALRTVQRLDELELADAAAARIARAADEGQTALDAELDRFASNPPPLTPNF
                     VSRFLHQLRVEGGALPAVMRLEQWIAEEALGSEEATARATQRLALTQVVMANSITSLR
                     AIGRMEWNSFVEGQSRIEAVLRDDPSGFYGSMTFATRDRYRHVVERIAKRTRRSEEAV
                     ARQAIDLARAGLEQSAGDPRRAHVGYYLIDQGLAELERATGYRSSPGEAVDRWVRSHP
                     NLVFVGGVLLATAAALAAVLWLASPSARAAWIGVLLLGLILANDIAVNVVNQLVTAFL
                     RPRPLPKLDLHKYGVPPEYRTAVVIPTLFGSVDAVREALENLEVQFLANREAHLHFAV
                     LSDFTDSPTETREDDAPIVEAAVEGVKALNARYAGGGEDAFYLFHRPRRWNPQEGVWM
                     GWERKRGKLAEFNRFALGRGDGAFSVIVGDIKPIKQVRYVITLDSDTVLPPETAPLLV
                     GALAHPLNRAVYDPALGRVVRGYGILQPRVGVSLPSANRSIFAAIHSGHPGVDPYTTA
                     VSDVYQDLYGEGSFTGKGVYDVEAFERATHGRFPENSLLSHDLIEGSYARAGLATDVI
                     VYDDYPTRYLTYTRRKHRWIRGDWQLLPWLRALVPGPDGSEPNRLSLLSRWKIVDNLR
                     RSTVELAQLAFLVGGWTLLPGSPLRWTLLGLGAIAAPWIVSLLLALFRPPLDKSWRAY
                     YAAVGHDATTSIQQVALAIVFLPHQAWVSADAIVRTLWRMAVSRRHLLEWRTASQ"
BASE COUNT         1060 a         2234 c         2059 g         1114 t
ORIGIN      
        1 gcgggagtat cgtgagatcc tccaggccta tcccgacgat ctcgaggcaa gattccagct
       61 ggccaacgtg ctctatctct acaatccgct gcggggaagg cctcaggcgg aggcgaggga
      121 gcagtacagc agggtcctgg aggtggaccc cgagttcctc tgtcccatat gaccgatgta
      181 tgacctcgcc gtgcgcgagg aagagtgggc agcggcggac acgctgatac gccgaaagtt
      241 caaggacaag gtccccctgg gggaccggct gctgttcgcc atcgtgcgca aggacacggc
      301 cgcgcaacgc ctgctccgct cggaggcatc gtcgtcggct ggccagaagg ggcggaagac
      361 gaaggacctg cttctggagg ctggatggtt actggcgact tacctcgagg aactggatcg
      421 ggccgaagag ttcgcccggc tcgggaccag tccctcgctc ccggtcgggc accgggcctc
      481 cgcccacgag cttctcggta acctccgcgt cgcaggaggg cgctggaccg acgcgaagac
      541 ggaattcgcc gcggccagcc gactggcaca acccgattcg gccctcgtcg gacgagcgct
      601 ggctgccgct ctgccattcc ttgcggtgcc aagaagagaa ttggagacca tccgcgcaga
      661 ggtggagcgc tggaaaccgg gcgccgatgt ctccgagccg ctaccggagt cggtccggcc
      721 gcttgcgccg catatccggc tctatctgct cggcctgctc agctcgagaa tgggcgacgc
      781 ccgcgccgcc ctctaccacg ccaccgaatt ggagcgccag cccgtgccgc cggactcgcg
      841 cgccctgatg cgtgacctcg cgcggacgat ccgggcggac gtcgcctggg tggcaggcca
      901 caaggatgag gcgttggcgc aactccaaga cgtgcgggga gaggtgccct tggcgctgat
      961 ccggctgccc tacttctccc aggagcacgc ccgctacctg cgaagccggc tgctacgtca
     1021 ggagggtcgc gaagccgagg cgcttgagct ggtcgaggtc ggcttcaggg gtacgccgaa
     1081 cgagctgcag tacagggcac ccgggcacct gctgagcgcc gagatcaatc accgactggg
     1141 gaatcgggcg gcagccgcgg agcattattc ccgcttcatc gggctctggc gggcctgcga
     1201 tccagccctg cgtccattgg tcgacggggc caaggcggag ttggcgaaaa tggtggcgga
     1261 gccgcgatag gcccgctgaa gccagacaac taggtggccg tgtgcgggga tgctcagggc
     1321 aggcttcgtg cccgagcaat gcagcggctt gaagtctttg cgaggggcga agcccgaagc
     1381 aatccggcgg cctgggaatg ctacgacccg gactcgagaa ggatcttctt ccacgccttc
     1441 cgcaagagct tccgggtatt cttgtagctc aaccgatcga gcgcttcatc caacccgcac
     1501 caggctctcg accgcccatc ctccggcgga cccgtctccc gcgtgagcac cgcgaggaag
     1561 tagtcgaccc gagccttgac tccgagaaat ccatactcga gcaccccggc cggcccgatc
     1621 agcttcccgc ttacgcccgc ctcttccttg gcctccctga gcgcggcagc cgcaggcgtc
     1681 tcgcccttct cgacgtgacc cttggggaag atccaggtct tgggattgcg cttggccgtg
     1741 acgagcagaa ccttcggctc cttggtatcg agccggacga agatggcgcc gctctggcgt
     1801 attaggggca tgctaggagc tgggagctag gagctggggg ctatgtagaa tcaccgggcg
     1861 ttggaaaaga agaaagccct caccactgag ttgtgagggc caccagccca tagcccatgg
     1921 ccaatcaggc gtgtatcgcc ggctggcctc cgtccttctg ggcctcgacg gcatctttca
     1981 ccttctcggt gaccttccgc cccagtttgc ccgcggcttt gagtacggca ccgcctgcgg
     2041 ccgccacggc cgcggtttcc agcccttcct tgaggcccgc tttgcctggc ctgaccagca
     2101 tcttcttggc cggcttggca cccaccagct tacgtgctcg acgtctcgcc cgaccggagc
     2161 cgaaatcggg atgcatggtc agcagctgcg ccacggccgt cgcgatgagc cgcttgtatt
     2221 gtttcttgga aacgacgctc tcgaccgcct tgagcccggc caccaatgtg cccatgccgg
     2281 tacgacgtaa ccacaaactt ttgtttttgt tgatgttttt tcttcagcgt ctagtctccc
     2341 gtggcctcgt gggcaccgcc ctcggtgact gatcaggact ccaggcgctg tcagcacgaa
     2401 ggcacgaaga acacgatgtt attgtttttt tgtgtttttg tctttgttct ttcttcgtgt
     2461 ccttggctcc gcgagtgacg ccagtcactg ctcccttcac gctgcagcgc cctacactgg
     2521 gcacttggta gccagcgccc gtgagcccga cgcactccgg gaggaaccca gatggccaaa
     2581 gttaaggatc aaatcgccca gctcggcggt ccccaacgcg ggatcttctt gtctgtaaca
     2641 gacaagtcgt tgtggcgcgg cacgaaggtc acgaaggtca cgaacgactg agctgatcga
     2701 cgccgagctg gtgcagcatc gtggccatgt cgaagtaatg ccgctgcagc ttggccttgt
     2761 cgccggcgat ctcggtcacc acacaggacc ggatttcaat gctcttttcg gtcgccgcaa
     2821 tcgcaccctt gggcgtctgg agcggccctt tgtgggtgcc ctgccaggtc aactcgagca
     2881 ccacagtgcc gtcgctgggg agcgcccggt ggaacgtggc cctcgcgtca gggaaggccg
     2941 tggcccagcc ctgccacagg ggaattacct gatcgactcc ctgaaccttc cgatgggtgg
     3001 ccacttcatc gtagacgaag tcggacgtga tgctggctct taccgcatcc cagtccttct
     3061 cgttgaatgc gatcagcggg gccttggctg cgtcgacgag ctgctgctgc gagatcaggg
     3121 tcgattgcgc tgacatgata gtcctcctgt tggcgagtgt gcgaggacat gtggctcgat
     3181 gccggctggg cagcgagact ctatgggcag gtaccgatct cgtcaagacg cggcccggag
     3241 tcattgggac cgcgcgggcg cgacctaacg gcctcaacct aagttccaag cgctttcacc
     3301 acgaaggcac gaagaacacg aaggacacga agaaaggcga cacctgataa aacaacagca
     3361 aagacaacaa aaacaacaac aaaagaaaac aacaaagagt tgtgggttgc gcatgactga
     3421 gcagctcagt ccttcgtaac cttcgtgccc ttcgtgactt cgtggtgaaa gcgcctggag
     3481 ttctggtcag tcaccggaag cggagcccgc gaagccaccc cagcgacggg attgcttcgg
     3541 gcttcgccct cgcaatgact accctccctt ggcccgctcg cgatgactac ctgcccgtca
     3601 ttatactgcc ctgttcaccg gcaaacactc cgcctttgag gtcacggcca tctccctgag
     3661 ctcacgccag tccttcacct tcctcacgcc ccggctgcgg actgacgtcc gcgaggatcg
     3721 tctcgccggg cccatccgcg gcgagctgct cggcgccgag cgcctggccg agcgggccca
     3781 ggaggtcgct gccagtcagc gcctggcgac cgggagacgg gctcggcggc tgaccccgct
     3841 cctcgcccgc ctcaacggca cccgccgcat cctcgaggag gccaacgcgc ggctgaccgc
     3901 ctcagacgtg gccgaggccg gggacgtcgg ccccgccggt gaatggctgc tcgacaacta
     3961 ccacgtggtg caggagcaca tcggcgaggt gcgggagagc ctgccgcgtg gctactaccg
     4021 cgagctgccg gagctgggcg gcggaccgtt ggccggctac ccgcgggtct acgagctggc
     4081 catcacgctg atctcccaca ccgaagggcg tgtcgacctc gacaacgtca ccggctttgt
     4141 cgcggcgttc cagcgggtgt cggccctcac cgtcggcgag ctgtgggcgg tgccggccat
     4201 gctccgcctg ggtctgatcg agaacgtccg ccggatggcg ctccgcacgg tgcagcgcct
     4261 cgacgagctg gagctggcgg acgccgccgc cgcccgcatc gcccgcgccg ccgacgaggg
     4321 acagaccgca ctcgatgcgg agctcgaccg gttcgcctcc aacccgccac cgctcacccc
     4381 caacttcgtc tcccgcttcc tccaccagct cagagtcgaa ggtggcgcgc tccccgccgt
     4441 gatgcggctg gagcaatgga tcgccgagga agccctgggc tcggaggagg ccaccgcccg
     4501 ggccacccag cggctcgcgc tcacccaggt ggtgatggcc aacagtatca ccagcctccg
     4561 cgccatcggc cgcatggagt ggaacagctt cgtggagggg cagagccgga tcgaggctgt
     4621 cctccgcgat gatccttccg gcttctatgg cagcatgacc ttcgccaccc gcgaccgcta
     4681 ccggcacgtg gtggagcgga tcgccaagcg gacccgccgg tcggaagagg ccgtggcccg
     4741 gcaggccatc gacctcgctc gtgccggcct ggagcagagc gccggagacc ctcgtcgcgc
     4801 gcatgtcggt tactacctga tcgaccaggg cctggccgag ctggagcggg cgaccggcta
     4861 ccgctcgtca ccgggagaag cggtggaccg ctgggtccgt tctcatccca acctggtgtt
     4921 cgtgggtggc gtgctcctcg cgacggcggc cgcgctcgcc gcggttctgt ggctggccag
     4981 cccatcagcc cgcgcggcgt ggatcggcgt actgctgctg ggcctgatcc tggccaacga
     5041 catcgccgtc aacgtggtca accagctggt caccgcgttc ctcaggcccc ggccgctccc
     5101 caagctggat ctgcacaagt acggcgtgcc gcccgagtac cgcaccgccg tggtcatccc
     5161 cacgctcttc ggcagcgtcg acgccgtccg cgaggcgctg gagaacctgg aggtccagtt
     5221 cctggccaac cgggaggcgc acctccactt cgcggtgctg agcgacttca ccgactcgcc
     5281 caccgagacc cgggaggacg acgcgccgat cgtggaggcg gcggtcgagg gggtgaaagc
     5341 cctcaacgcc cgctacgccg gcggcggcga ggacgccttc tatctcttcc accgcccccg
     5401 ccgctggaac ccgcaagagg gcgtctggat gggatgggag cggaagcggg gcaagctggc
     5461 cgaattcaac cggttcgccc tcggccgcgg agacggggcc ttttccgtga tcgtgggaga
     5521 catcaagccg atcaagcagg tgcgctatgt catcaccctc gactcggaca cggttctccc
     5581 gcccgagacg gcgccccttc tggtcggcgc cctcgcccac ccgctcaacc gcgccgtgta
     5641 cgacccggcg ctgggccggg tggtgcgcgg ctacgggatc ctccagcccc gggtcggcgt
     5701 ctccctcccc agcgcgaacc gctcgatctt cgccgccatc cactcgggcc accccggcgt
     5761 cgatccctac accacggcgg tgtccgacgt ctatcaggac ctctacgggg agggaagctt
     5821 caccggcaag ggcgtgtatg acgtcgaggc gttcgaacgg gcgactcacg gacgcttccc
     5881 cgaaaactcg ctgctctccc acgacctgat cgaggggagt tacgcccggg ccggtctcgc
     5941 gaccgacgtg atcgtctacg acgattaccc gacccgctac ctgacctaca cccgccggaa
     6001 gcatcgctgg atccggggcg actggcagct cctgccctgg ctgagagcgc tggtgcccgg
     6061 ccccgacggc tccgagccca accggctctc gctgctctcc cgctggaaga tcgtggacaa
     6121 cctccgccgc agcaccgtcg agctggccca gcttgccttc ctggtcgggg gctggacgct
     6181 gctccctggt tccccgctcc gctggaccct cctcggtctc ggcgccatcg ctgcgccctg
     6241 gatcgtctcc ctcctgctcg cgctgttccg gccgccgctc gacaagtcct ggcgcgccta
     6301 ctacgcggcc gtgggacatg acgccacgac gagcatccag caggtggcgc tggcgatcgt
     6361 tttcctcccc caccaggcct gggtctctgc cgacgcgatc gtccgcaccc tgtggcggat
     6421 ggcggtctct cgccgccacc tgctcgagtg gcggaccgcc tcccaga
//
LOCUS       DASYRV010000261         7781 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1764591, whole genome shotgun sequence.
ACCESSION   DASYRV010000261 DASYRV010000000
VERSION     DASYRV010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7781
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1764591"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(38..352)
                     /locus_tag="VGQ24_06710"
     CDS             complement(38..352)
                     /locus_tag="VGQ24_06710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454563.1"
                     /translation="MSEFTLGGYMQKHDRAAAFGGSDGQAYSVAIYVDEEPDVRGLYG
                     AALLFVRWSPGGDRPSGHLESETLVWGKTATEAQARLESLSLYDVKAALEEAIARAPG
                     VW"
     gene            complement(349..1278)
                     /locus_tag="VGQ24_06715"
     CDS             complement(349..1278)
                     /locus_tag="VGQ24_06715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HEV8454564.1"
                     /translation="MRQGLLWLSEQRKVFNFVRRNGVAKKLASRFVAGETIEEGVKAA
                     CDLRQRGITSSLDLLGESVHVESEAFAARDQYLAMMDRMAAEGVEVNVSVKLTQMGLD
                     IGEDLCHANMIRILEKAKQLSGFVRLDMEGSEYTQRTLDFFTGRLFGSYGGPCGVVIQ
                     SALRRSERDINALIALKARVRLCKGAYLEPPEIAYPDKKDVDRNYVQLMERLLREGNY
                     PGLATHDETIIDHARRFVSRERIASDRFEFQMLYGVRRDLQGRLRHQGFNMRVYIPFG
                     TQWYPYLMRRLAERPANIAFILGNLIRESVPGR"
     gene            1475..2611
                     /locus_tag="VGQ24_06720"
     CDS             1475..2611
                     /locus_tag="VGQ24_06720"
                     /inference="COORDINATES: protein motif:HMM:NF013215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IB"
                     /protein_id="HEV8454565.1"
                     /translation="MATRQRRWKRVERPVKRTRRLSAPPPEVVSDPIDSAEAAGLRYV
                     SDTQPGIRRKKSGKGFTYVGTDGKTIHDSKELARIRSIAIPPAYTDVWICPSPNGHIQ
                     ATGRDARGRKQYRYHAKWREVRDETKFERMLAFSEVLPKIRRRVERDLNRNGLSRERV
                     LATVVRLLECTQIRVGNDEYAKANRSYGLTTLQDRHVEISGSSLRFEFRGKSGKTHTV
                     SLNDRRLARIVLRCQALPGEDLFQYVDDEDVRQTIGSGDVNAYIREISGQEFTAKDFR
                     TWSGTLLAVAALTELGAWSTQRQAKSNVLRAIDRVAEQLNNTRAVCRKYYVHPAVFES
                     YLAGTMLDALQNGTKEAAKSALTGEEASVVRLLRHQLKSAAAQT"
     gene            2849..4030
                     /locus_tag="VGQ24_06725"
     CDS             2849..4030
                     /locus_tag="VGQ24_06725"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEV8454566.1"
                     /translation="MSVSPSSRVVGSRPSPAVPLVPGRQRTAWWIVLAGSTVVGLGYF
                     LSSASAASEGGHSTTGWVRLLLFSVGTAWIWAALTPPVLWLTRNATLAPGNRARSAGV
                     YVLTGIGFFVASGVLEWMLGLVTGMVTAGQFWSTLLFECLATRLLAYLAIATLGRTAY
                     YFALYRTRQLHASELETRLARTHLQVLKMQLQPHFLFNTLNAVAELVHTEPDAADLMI
                     TRLGRLLRLSLDNAGHQVVPLRQEIDFLRVYLDIEQVRFQDRLQIVWDVAPETLEAAV
                     PTLLWQPVLENAIRHGVTPLAGMGRIVIASRREGDDLVLEIRDNGTGLPGGTAPREGV
                     GLRNIRERVYQLYGAGAVFSLAPASGGGTVATLRLPFTPCEGPQTPVPLSQSTFREMA
                     G"
     gene            4027..4797
                     /locus_tag="VGQ24_06730"
     CDS             4027..4797
                     /locus_tag="VGQ24_06730"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HEV8454567.1"
                     /translation="MTVRVLVADDEPIGRHRLVRLLQAEPGTDVVAACADGDEAVEAI
                     REHAPDIVLLDIQMPHLDGFEVVAALGDAQQPVVIFVTAHDQYALRAFEVHAFDYLLK
                     PVDQDRLREAIARAVSSAGRAQPSPTRRILGLLEELNARERARGRERLVVRTPERAFF
                     LRTETIDYIEAAGKFVHLHVGRTVHALRESMAELEQELDPARFLRISRSVIVNLDRIQ
                     EIQPWFQGDYVLILSDGTKLTSTRGYRDNMRRLLGRSA"
     gene            4797..5204
                     /locus_tag="VGQ24_06735"
     CDS             4797..5204
                     /locus_tag="VGQ24_06735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454568.1"
                     /translation="MGRTAKTGKTGRTGLRAGLLLALALACAGPRQNVEPEPVQADGF
                     SLILNSHHLLDVNIFIQHDGQVDRVATLPASTSRSIVLPSWMLGQSRAVRIIAEPIGD
                     DSRYTTETLSIQPGQIIELNVESSIGRSNYSIQ"
     gene            complement(5205..5639)
                     /locus_tag="VGQ24_06740"
     CDS             complement(5205..5639)
                     /locus_tag="VGQ24_06740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454569.1"
                     /translation="MSRLPCLAALLLAGCYTYRPLATPAPPPGQRVSAQLTTEGSREL
                     TGQIGPEVLHIEGQVVSADSTGFDLEVLEIESYRGIRSDWHGEHIRLPRQAVAGLQER
                     RLSVGGTTLLGGVLAGGLYAVYRMLGASLFEGGNGQVGGGSR"
     gene            complement(5710..7281)
                     /locus_tag="VGQ24_06745"
     CDS             complement(5710..7281)
                     /locus_tag="VGQ24_06745"
                     /inference="COORDINATES: protein motif:HMM:NF024181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /protein_id="HEV8454570.1"
                     /translation="MRHSLKFLLSAALAIGAIGCGDFLSGPGVDQDPNNITRLTRPGP
                     LYIGIQALQSVQFEGQLARNAAEYVQQIAGNSRQQIGYDLYQMDPVTIDPHFFSVYGS
                     SITVQGGGGLLDIHKMQQLARAVNDSLYLGIGKVYESLVIGMAASIWGDIPYRQAADS
                     TNETPAFDPQLQVYADVLTQLDSAIFFLAAVPGPPNVGPPADNAELVYIDRGGDAAAL
                     AAVYTQVAHSLKARFHMHLAEVDPSHYALALAEVPLGISTPANDMLWYHDQTPTGNNV
                     WWQFMSARGDIAPGAALIEILKRRIAAGVENDERLNFYFTPADPAGTPADFFGFRPGG
                     SLNMQTAGGIYNGNGSPATGNYSAFTFIDFNVDPGDMRMPVITYAETQLIGAEAAFQI
                     GGQGAAQPFLDAARANRSYGSRGTTPNLFAPLTPAPATLENIMEEKYVTLFLNIEAWN
                     DYKRTCIPALAPAPASVGGTLPGSQPVPGRLPYGITELNANPNAPNVSPVGRNANDPN
                     PCPLLDYTSSVPLGN"
     gene            complement(7303..>7781)
                     /locus_tag="VGQ24_06750"
     CDS             complement(7303..>7781)
                     /locus_tag="VGQ24_06750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454571.1"
                     /translation="QGGAAYNGTRGALNHFGTSKESQVYRDGGNFIFGDTYFGGATVA
                     GPGVGMGVPLGEAWFTGSGSTFNGATSQFIEDGSFVKLREISLGYTFDQAWVSRLLGF
                     SSMELRVSGRNLHTWTNYSGVDPETSLLGAASPVRGIDYFNNPQSRSYVFSLTLNR"
BASE COUNT         1376 a         2506 c         2496 g         1403 t
ORIGIN      
        1 gcgccatcgc gctccagaac agtgccaagc cggagcgtca ccaaacccct ggtgcgcggg
       61 cgatggcctc ctcgagcgcc gcctttacgt cgtagagcga gagtgactcg agtctggcct
      121 gggcttcggt tgccgtcttg ccccacacga gggtctcgga ctcgagatgt ccggatggcc
      181 ggtctccacc cggcgaccat cggacgaaca gcaaagcggc cccatacagg ccccgcacat
      241 ccggctcctc gtccacgtag atcgccaccg agtacgcctg gccgtcgctg ccgccgaagg
      301 ccgcagcacg atcatgcttc tgcatgtatc cgcccagggt aaactcgctc accggcctgg
      361 caccgactct cgtatgaggt ttcccagaat gaaggcgatg ttcgccggtc gttcggccag
      421 cctccgcatg agataaggat accattgggt cccaaagggg atgtagaccc gcatgttgaa
      481 tccctgatgg cggagccggc cctggagatc gcgccttaca ccatagagca tctggaactc
      541 gaaccggtct gatgcgattc gttcccggct cacaaaccgg cgggcgtgat caatgatcgt
      601 ctcatcgtgg gtggcgagac cggggtagtt cccctcgcgc agcagccgct ccatgagctg
      661 gacatagttc cggtccacgt ccttcttatc cgggtaggcg atttcgggcg gctcgaggta
      721 cgcgcccttg cacagccgta cgcgggcctt gagggcgatg agagcgttga tgtcgcgctc
      781 cgagcggcga agcgccgatt gaatcaccac cccgcaaggg ccgccatagg atccgaagag
      841 ccgtccggta aaaaaatcga gggtccgctg ggtgtactcg gaaccctcca tgtcgagccg
      901 aacgaacccg ctaagctgtt ttgctttctc caggatacgg atcatgttgg cgtggcagag
      961 gtcctcgccg atgtcgagcc ccatctgggt gagcttgacc gagacattga cctccacgcc
     1021 ttccgccgcc atccgatcca tcatcgccag gtactggtct cgggcagcga aggcctcgga
     1081 ttccacatgc acgctctcgc ccagcaggtc gagcgacgag gtgatcccgc gctggcgcaa
     1141 gtcacacgcc gccttcacgc cttcctcgat cgtctcaccg gccacgaatc gagatgccag
     1201 ttttttcgcc acaccatttc gtcgaacgaa gttgaagacc ttacgctgct cggagagcca
     1261 gagcagaccc tgtcgcatga tcagatgagt accctaccgc attagtgaag tcgcccggag
     1321 cagcgcacag aaggtagcgc ggcacggatc ggctttgtag ggcaggctcc gcgcaccaag
     1381 cgatcccgcg gtgtgactca ggtcacgggc tggtaagccg aatctggcaa tcctcacacc
     1441 atcacatggt gtacaccact aattggcgga aatcatggcg acgcggcagc gacggtggaa
     1501 gcgggtcgag cgaccggtca aacggacacg caggctgtcg gcaccgccgc ccgaggtggt
     1561 gagcgatccg atcgattcgg cagaggcggc cggattgcgc tatgtgagcg acacccagcc
     1621 cggaatccgg cgaaagaagt cgggcaaggg attcacctac gtcgggaccg atggtaagac
     1681 catccatgat tccaaggagc tggcccgaat ccgctcgatc gcgattcctc ctgcctatac
     1741 cgatgtgtgg atctgtccca gccctaacgg ccatatccag gcgaccggcc gggatgcccg
     1801 gggccggaaa cagtatcgct accatgccaa gtggcgtgag gttcgggacg agacgaagtt
     1861 cgagcgcatg ctcgccttca gcgaggtgct gccgaagatc cgccggcggg tagagcgcga
     1921 cctgaatcgg aacggcttgt cccgggagag ggttctggcc accgtcgtgc gcctgctgga
     1981 atgcactcag atccgcgtgg ggaacgacga gtacgccaag gcgaatcggt cctatgggct
     2041 cacgacgcta caagaccgtc acgtcgagat ctccgggtcg agcctccgct tcgagttccg
     2101 gggcaagagc ggcaagacgc acaccgtcag cctgaatgac cggcggctcg cccgaatcgt
     2161 gctccgctgc caggccctgc ccggagagga tctcttccag tacgtcgacg atgaggacgt
     2221 ccgccaaacc ataggatcgg gggacgtcaa cgcctatatc cgcgagatct caggccagga
     2281 gttcaccgcc aaggacttcc gcacctggtc gggtactctg cttgcagtgg ccgcattgac
     2341 cgagctgggc gcgtggtcta ctcagcgcca agccaagtca aatgttctcc gggccatcga
     2401 ccgggtggcc gagcagctca acaacacccg ggcagtgtgt cgcaagtatt acgttcaccc
     2461 ggcggtgttc gagtcgtacc tggccggcac catgctggac gctctgcaga atggaacaaa
     2521 ggaggcggcc aagagcgcac taaccggcga ggaagcgtca gtcgtgcgtc tcctccgcca
     2581 tcagcttaaa tcagcagccg cacagacgta gttcaccccc gacatccacc gctccgaggc
     2641 tgtgtgatgg ctgagccgct ttggcgtctc cccatcatcc accgccgacg gctggtgggc
     2701 ctgtagacgg gcactcacat cgttcggtcc ccgccggcgc cgtttcacac caccggatgt
     2761 gtcactcatg cccgaatcgt tcgttgaacg aggggctccg cgtatcgtag accgcagccg
     2821 atggtcccta cggatgcgct ggggtgccat gtccgtttct ccgtcatccc gcgtggtggg
     2881 gtcccgcccg tctcctgcag tcccgctcgt gcctggccgc cagcggacag cgtggtggat
     2941 cgtgctggcc ggctcgaccg tggtcgggct ggggtacttt ctgtcgtcgg cgtcggctgc
     3001 ttcggaaggg ggccactcga caaccggctg ggtgcgcctc ctcctattct cggttggaac
     3061 ggcatggata tgggccgccc tcaccccacc agttctctgg ctcacccgga acgccaccct
     3121 tgcgcccggc aaccgggctc gcagcgccgg tgtctatgtc ctcaccggga tcggcttctt
     3181 tgtcgcttcc ggagtgctcg agtggatgct tgggctggtg accggaatgg taacggcggg
     3241 acagttctgg tccaccctgt tgttcgagtg tctcgccacc cgcctgctcg cgtatctggc
     3301 aatcgccacg ctcggccgga cggcgtacta cttcgctctg taccgcaccc ggcagctcca
     3361 cgcatctgag ctcgagaccc ggctggcgcg cactcatctc caggtgctca agatgcagct
     3421 acagccgcac tttctcttca acaccctgaa cgcggtggcc gagctggttc ataccgagcc
     3481 cgatgccgcc gatctgatga tcacccgtct cggccgactc ctgcgcctct cgctcgataa
     3541 cgcgggccat caagtggtcc cgctgcgcca ggagatcgac tttctcaggg tctacctgga
     3601 catcgagcag gttcgcttcc aggaccggct ccagatcgtc tgggatgtgg cgccggagac
     3661 cctcgaggcg gcggtcccca cgctgctgtg gcaaccggtg ctggagaatg ccatccggca
     3721 tggtgtcacc ccactcgccg gcatggggcg catcgtcatc gcgtcgcgcc gggaggggga
     3781 cgacctggtg ctcgagattc gggacaacgg taccgggctg cccggcggca cggcgccacg
     3841 ggaaggcgtc gggttgcgca acatccgtga gcgagtctat cagctgtacg gcgcgggcgc
     3901 ggtgttcagc cttgccccgg cctcgggcgg cggcacggtc gccaccttgc gcctgccgtt
     3961 caccccatgc gaaggccctc agacgccggt gccactcagc caatccacct tcagggagat
     4021 ggccggatga cagtgcgcgt gctcgtggcg gacgatgagc ccatcggacg ccatcgcctg
     4081 gtccgcctac ttcaggcgga gcccggcacc gatgtcgttg ctgcctgtgc cgatggcgac
     4141 gaggccgtag aagccatccg cgagcacgcg cccgatatcg tgctgctcga catccagatg
     4201 ccgcatctcg acggcttcga ggtggtcgcg gccctgggcg acgcgcagca accggtggtc
     4261 attttcgtga ctgcgcacga ccagtacgcc ctccgggcct tcgaggtcca cgccttcgat
     4321 tacctgctca agccggtcga ccaggaccgt ctccgggagg cgatcgcacg cgccgtctcc
     4381 agtgcggggc gggcccagcc gagtccaacc cggcgcattc ttggcctgct cgaggagctg
     4441 aacgcgcgag aacgggcccg cgggcgggag cggctggtcg ttcgcacccc ggagcgcgcg
     4501 ttctttcttc gtaccgagac catcgactat atcgaggcag ccggaaagtt tgtccatctg
     4561 catgttggac gcaccgtgca tgccttgcgc gagagcatgg cggagctgga gcaggagctc
     4621 gatcctgccc gctttctccg catcagccgc tcggtaatcg tcaatctgga tcggatccaa
     4681 gagatccagc cctggtttca aggggactat gtgctcatcc tgagcgatgg cacgaagctc
     4741 acgtcgactc gcggctaccg ggacaacatg cggaggttgc tggggaggtc ggcgtgatgg
     4801 gaaggacggc aaagacggga aagacgggaa ggaccggttt gagggctggg ctgctgctcg
     4861 cactggcatt ggcgtgcgcg gggccgaggc agaacgtcga gccggagccg gtgcaggccg
     4921 acggcttttc cctcattctc aacagccacc acctgctgga cgtaaacatc ttcatccagc
     4981 acgacggcca ggtggaccgg gtggcaacgc tgcccgcgtc gacgtcgcgt tcgatcgtcc
     5041 tgccatcgtg gatgctcggg cagtccaggg cagttcggat cattgccgag cctattgggg
     5101 acgacagcag atacaccacc gagactttga gcatccagcc cggtcagatc atcgagctga
     5161 acgtggagag ctcgatcggc cgctcgaact acagcatcca gtgactagcg gctgcctccc
     5221 cccacctggc cgttccctcc ttcgaagaga ctcgcaccga gcatccggta gaccgcgtag
     5281 agccctcccg ccagcacgcc acccaacagg gtagtgcctc cgacggaaag ccggcgttcc
     5341 tggaggcccg cgacggcctg gcggggaagc ctgatgtgct cgccgtgcca atccgaacgg
     5401 attccccggt aggactcgat ctccagcacc tccaggtcga acccggtcga gtcggcgctg
     5461 accacctggc cctcaatatg aagaacctcc gggccgatct ggccggtgag ctctcgagag
     5521 ccctcggtgg tgagctgtgc cgacacccgt tgccccggag gcggggccgg ggtcgcgagc
     5581 ggacgatagg tatagcagcc tgccagcagc aaggcggcga ggcacggtag tctgctcatg
     5641 gataaagccc tttcgaggaa ggatgcggag gcgagcattg ctctcgcctc cgcatcatcc
     5701 tccgcccact caattgccca gcgggaccga gctggtgtag tccagcagcg gacaggggtt
     5761 cgggtcgttg gcattgcgcc cgaccggcga cacgttgggc gcgttggggt tggcgttgag
     5821 ctcagtgatc ccgtacggga gccgtccggg gaccggttgc gatcccggga gcgtgccacc
     5881 caccgacgct ggcgccggcg ccagtgcggg aatgcaggtg cgcttgtagt cgttccacgc
     5941 ctcgatgttg aggaacaggg tgacgtactt ctcctccata atgttctcca gcgtggccgg
     6001 cgccggcgtc aggggtgcga acagattcgg ggtggtaccc cgcgagccat acgagcggtt
     6061 ggcccgggcc gcatcgagga acggctgggc ggctccctgc cctccgatct ggaacgcggc
     6121 ttcagccccg atcagctggg tttcggcgta ggtaatgacc ggcatccgca tgtcaccggg
     6181 atctacattg aagtcgatga aggtgaaggc ggagtagttc ccggtggcag gagagccgtt
     6241 gccgttataa atccccccag ccgtctgcat gttcagcgac ccgccgggac ggaagccgaa
     6301 gaagtccgcg ggcgtcccag ctggatctgc cggggtgaag tagaagttga ggcgctcatc
     6361 gttctcgact cctgcagcaa tgcgccgctt gaggatctcg atcagcgccg ctccgggggc
     6421 gatgtcgccc cgcgcgctca tgaattgcca ccagacgttg ttgccggtgg gagtctggtc
     6481 gtgataccac aacatgtcgt tcgccggcgt gctgatgccg agcggcacct cggccagcgc
     6541 gagggcgtaa tgcgaggggt ccacttcggc caggtgcatg tggaaccggg ccttcagcga
     6601 gtgcgctacc tgggtataca ccgccgccaa ggcggccgcg tcaccgcccc gatcgatgta
     6661 gaccaactcg gcgttatccg ccggcgggcc cacgttgggt gggcctggga cggcggctag
     6721 gaagaagatc gcggagtcga gctgggtcag tacgtcggcg tagacctgga gttgagggtc
     6781 aaaggccggc gtttcgttgg tggaatcggc cgcttggcgg taaggaatgt cgccccagat
     6841 tgaagccgcc atccctatga ccagtgactc gtacaccttt ccgatcccta gatagagaga
     6901 gtcgttcacc gcccgggcca gctgctgcat cttgtggatg tcgagcagcc cccctccgcc
     6961 ctgaaccgtg atggacgagc cgtataccga aaagaagtgg ggatcgatcg tcaccggatc
     7021 catctgatac aggtcgtagc cgatttgctg gcgggagttg ccggcgatct gctgcacgta
     7081 ctccgcggca ttccgcgcca gctggccctc gaactgcacc gactgcaagg cctggattcc
     7141 gatgtacagc ggtccgggcc gggtgagccg ggtgatgttg ttcgggtcct ggtccactcc
     7201 tggacccgag agaaagtcgc cgcacccaat cgcgccgatg gctagggcgg cactcagcag
     7261 gaacttgagc gagtgtctca tggcggaatt cccctggctc atttagcggt tgagggtgag
     7321 ggagaacaca tacgaacggc tctgggggtt gttgaagtaa tcgatccccc gcaccgggct
     7381 ggcggccccc aacagcgacg tctcggggtc cacgccgctg tagttggtcc aggtgtggag
     7441 attgcgtccg gacacccgca gctccatgct gctaaagccg agcagacggc tgacccaggc
     7501 ctggtcgaac gtgtagccca gcgatatttc gcggagcttc acgaagctgc catcctcgat
     7561 gaactgcgac gttgcaccgt tgaaggtgct gccactgccg gtgaaccagg cctcgcccag
     7621 cggtactccc atgccgacgc ccgggccggc gacggtcgcg cctccgaagt aggtatcgcc
     7681 gaagatgaag ttcccgccgt cccggtacac ctgcgattcc ttagaagtgc cgaagtggtt
     7741 cagcgcgccc ctggttccgt tataggcggc gcccccctgc c
//
LOCUS       DASYRV010000262         3643 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2546186, whole genome shotgun sequence.
ACCESSION   DASYRV010000262 DASYRV010000000
VERSION     DASYRV010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3643
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2546186"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..348
                     /locus_tag="VGQ24_06755"
     CDS             <1..348
                     /locus_tag="VGQ24_06755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454572.1"
                     /translation="DAPVGSRELREFGTVDIRADHPGYREPLARDLARLSQEADAEVV
                     LLGSVATGKYVDVLLEFLGERLLFPREFVGRGDMSRGALLLRAVREGKELAYEPVAGA
                     IRHGRRAAKVGPP"
     gene            345..1298
                     /gene="ligD"
                     /locus_tag="VGQ24_06760"
     CDS             345..1298
                     /gene="ligD"
                     /locus_tag="VGQ24_06760"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF045432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-homologous end-joining DNA ligase"
                     /protein_id="HEV8454573.1"
                     /translation="MTVTKARAHRLAIPDLENATVRAGTHVVQLTNLDKIFWPELGLT
                     KRDLLQYYADVCSVLLPHLEDRAMVMKRYPNGIHGKSFFMKRTPSPKPAWLETCEIMH
                     KSKGLIAFPVVQDLASLLWVVNLGCIDLNPWYARCDDVDRPDYLHFDLDPVEGAGFDR
                     VLETAIVVRNALEQLGMSPLAKTSGSKGIHVYVGIVRGPVQKEVWRFAKALAKGLEQL
                     HPGLITAEYRVANRPRGRVLVDYNQNAWGHTLASVYSVRPAVAATVSIPVTWEEVEAG
                     FEIADFRMENVPARVRKLGDLWKPLLATRGRFPLEKLISGT"
     gene            1764..2117
                     /locus_tag="VGQ24_06765"
     CDS             1764..2117
                     /locus_tag="VGQ24_06765"
                     /inference="COORDINATES: protein motif:HMM:NF022815.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3175 domain-containing protein"
                     /protein_id="HEV8454574.1"
                     /translation="MSPSRPRRSKKSRPTSTSTQRRWSGRVTRTSNALDLDQGVFSQR
                     SARSIALSLKRSAERSRRRKSEPFRSAMSMLNLYINRAGKNLSAERKRTLERTKVELR
                     RVFHRNAGDRRRKRT"
     gene            2117..2857
                     /locus_tag="VGQ24_06770"
     CDS             2117..2857
                     /locus_tag="VGQ24_06770"
                     /inference="COORDINATES: protein motif:HMM:TIGR02777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase ligase N-terminal
                     domain-containing protein"
                     /protein_id="HEV8454575.1"
                     /translation="MPKKGSTRPKRKPAGSPGPRLAEYRRKRDFTRTAEPRGGSAGAR
                     QKLAFVIQKHAASHLHYDLRLELDGVMKSWAVPKGPSLDPAVKHLAMEVEDHPIEYNK
                     FEGTIPEGEYGGGTVMLWDRGTYSYGGSDPDPMEGLRRGYAKGDLKFVLNGKRLKGSW
                     VLVRMRRPGRAQWLLIKHRDEHAVPGSDVAADNVTSVATGRSMEEIATGQSRVWRSNR
                     PVEQKGLSLLQTLKGAKPKTAKKAGART"
     gene            complement(2885..>3643)
                     /locus_tag="VGQ24_06775"
     CDS             complement(2885..>3643)
                     /locus_tag="VGQ24_06775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454576.1"
                     /translation="ANPPDIDPNYPYGVGIGVYGFDVTATSLKPPSTPDIMGYCNDPW
                     ISDYIYRRVMSYRAANPAGAQVAASAKQPTILVWGRVVNGQPVLEPAFHIVTRPQLPA
                     GAGSYTIEGIATDGSSLFRLSFEPVEVADDPSGSRHFAFAVPLDKARAARLGSLRVNG
                     PGGTAEATSLSVGRISRAPVPDTITARRRASGIDLEWNPSAHRMIMVRDPDTGEVLSF
                     ARGGKARVWTTKGNLDLVASDGVHSKEKRVTVTR"
BASE COUNT          709 a         1114 c         1234 g          586 t
ORIGIN      
        1 gatgcgccgg tggggtcgcg cgagctccgg gagttcggga ccgtagacat ccgggcggat
       61 catccgggct accgcgagcc actcgcgaga gacctggcgc ggctcagtca ggaggccgat
      121 gccgaggtgg tgctgctcgg cagcgtggca accggcaagt atgtggacgt gctgctcgag
      181 ttcctgggcg aacggctgct gttcccccgc gagttcgtcg gccgggggga tatgagccgg
      241 ggtgcgctgc tgctccgagc cgtgcgagag gggaaggagc tcgcctacga accagtagcg
      301 ggtgccatcc ggcatggccg gcgggccgct aaggtaggcc cgccatgacg gtcaccaaag
      361 ccagagccca ccgacttgcg atccccgacc tggagaatgc gacggttcgt gccggcaccc
      421 acgtcgtgca gctcaccaat ctcgataaga tcttctggcc cgagctcggt ctgaccaagc
      481 gggatctgct ccagtattac gccgatgtct gtagtgtcct cctgccacac ctcgaggacc
      541 gggcgatggt gatgaagcgc tatcccaacg gcatccacgg gaagtccttc ttcatgaaac
      601 gcacgccgtc gcctaagcca gcctggttgg agacctgtga gatcatgcat aaatcgaaag
      661 gcctgattgc ctttccggtg gtgcaggacc tcgcctcgct gctttgggtc gtgaatctcg
      721 gctgcatcga tctcaatccc tggtacgcac gctgcgacga tgtcgatcgt cccgactatc
      781 tccatttcga tctcgacccg gttgagggcg ccgggttcga ccgggtgctg gagaccgcca
      841 tcgtcgttcg caatgcgctc gagcagttgg gaatgtctcc tctggcgaag accagcggct
      901 cgaagggaat ccacgtctat gtcggaatcg tccgcggccc ggtgcagaag gaggtctggc
      961 gcttcgccaa ggccctggcc aaggggctgg agcagctgca ccccgggctc atcacagccg
     1021 agtaccgcgt cgccaaccgc ccacgcgggc gagtgctggt ggactacaac cagaacgcct
     1081 ggggccatac cctcgcgtcg gtgtactcgg tgcgtccggc ggtcgcggct acggtctcca
     1141 tcccggtgac ctgggaagag gtcgaagcgg gattcgagat tgccgacttc cggatggaga
     1201 atgtgcccgc ccgggttcgg aaacttggcg acctctggaa gccgctgctc gccactcgcg
     1261 ggcgctttcc gctcgagaag cttatcagtg gaacgtgatt ggaagcacag cacttcgggt
     1321 gacgtcgccc aaggttgtcg cagggaggtg atcagaatgc cggagaaggc cacagtggag
     1381 aaggcgcaag cagaccttcg cgccgggaaa agcccgacaa ccgccgcagg cgagttcgtt
     1441 cgcgaggaga tggagcacat tcgcgagggt aaacacggtg ctcggtcgcc ggagcaggcc
     1501 atcgccattg gtctgtcgaa ggcccggcgg gcaggggtgc cgctgaagcc gccgaaaaag
     1561 ggccaggcga agaagagtac ccgccgatcg gcggagcgcg attacgagac cgggcaaggg
     1621 aagcggaagc gtcgtgctcc atctcggagg cgcagcaagg cgactactcg cgcgctcaag
     1681 cgtgaatcca aggcggcggc ctcgagaagc gctttgtcac gtcatgcgaa aagcgcggca
     1741 agacggcgaa agcagtgagc cggatgtctc ccagcaggcc caggaggagc aagaagtctc
     1801 gaccgacgtc cacttccacg caacgccgct ggtcgggtcg ggtaacccgg acgagcaacg
     1861 cactcgatct cgaccagggc gtattcagcc aacggagcgc gcggagcatc gccctctcgc
     1921 tgaagcggtc ggccgagcga agccgccgac gcaaatcgga gccgttccgc tcggccatgt
     1981 cgatgctcaa cctctacatc aatcgcgccg ggaagaacct gagcgcggag cgaaagcgca
     2041 ctctcgagcg aaccaaggtc gagctgcgcc gcgtgttcca tcgaaacgcg ggtgaccggc
     2101 ggaggaagag gacctgatgc cgaagaaggg gagcacgcgt ccgaagagga agccagccgg
     2161 ttctcctggg cctcgactcg ccgaataccg gcgcaaacgc gacttcaccc gaaccgcgga
     2221 gccgagaggc gggagcgcgg gcgcccggca aaagcttgcc tttgtcattc agaagcacgc
     2281 ggccagtcac ctgcactatg accttcgcct cgagctcgat ggcgtgatga aaagctgggc
     2341 ggttcccaag ggccccagcc tggaccccgc ggtcaagcat ctcgccatgg aagtcgagga
     2401 tcatccgatc gagtacaaca aattcgaggg gaccatcccc gagggtgaat acggcggcgg
     2461 cacggtcatg ctttgggatc gggggaccta cagctatggg ggaagcgatc ccgatcccat
     2521 ggaagggctg cggcggggct acgccaaggg cgatctgaag ttcgtgctca acgggaagcg
     2581 gttgaagggg tcctgggtcc tggtgcgcat gcggcggccg ggaagggcgc aatggctcct
     2641 gataaagcac cgggacgagc atgccgtgcc gggttcggat gtggcggccg acaacgtgac
     2701 ctcggtggcc acggggcgaa gcatggaaga gatcgcgacg gggcagagcc gggtatggag
     2761 gtcgaatcgg cccgtggagc agaagggcct cagcctgctt cagacactca aaggcgccaa
     2821 gcccaagacc gcgaaaaaag ccggcgcccg aacctagcca gcgccggcag ctctcggcga
     2881 gacgtcaccg ggttacggtg acccgcttct ccttgctgtg caccccatca gacgccacaa
     2941 gatcgaggtt tcccttcgtg gtccacaccc gggccttccc gcctcgtgcg aacgagagta
     3001 cttcgccggt gtcggggtct cgtaccatga tcatccggtg agccgaaggg ttccattcca
     3061 gatcgatgcc gctggcgcgg cggcgtgccg tgatagtatc gggcactggc gctcgggaga
     3121 tgcgtccgac cgacaacgag gtcgcttcgg ccgtaccacc gggcccattc acccgcaagc
     3181 tcccgagccg ggcggcacgg gccttgtcca gcgggaccgc gaaggcgaaa tgccggctgc
     3241 cactcggatc gtccgccacc tccaccggtt cgaacgacaa tctgaagagc gaacttccat
     3301 cggtggcgat cccctcgatg gtataggagc cggctccggc aggcagttgc ggccgcgtga
     3361 cgatatggaa ggccggctcg agcaccggtt ggccgttaac cacgcgaccc cagacgagga
     3421 tcgtaggctg ctttgctgag gcggcaacct gcgcgccggc cggattcgca gctcggtagc
     3481 tcatgacgcg tctgtagatg taatcgctga tccaggggtc attgcagtaa cccatgatat
     3541 ccggagtgga aggtggcttc aggctcgtgg cggtgacgtc gaatccatag actccaatgc
     3601 ccaccccgta gggataattg gggtcgatgt cgggcggatt ggc
//
LOCUS       DASYRV010000263         3541 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1346254, whole genome shotgun sequence.
ACCESSION   DASYRV010000263 DASYRV010000000
VERSION     DASYRV010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3541
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1346254"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1535)
                     /locus_tag="VGQ24_06780"
     CDS             complement(<1..1535)
                     /locus_tag="VGQ24_06780"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEV8454577.1"
                     /translation="MPFPSFRSAAFVLLVACAAKQTPPERPLPKPNIDPGRKPPVAAE
                     PSPEPEDTLRPMVPADAAYAHGWMSLASTGVDQFLRAHPNYDGRNVLIGILDTGIDAG
                     IPGLAKTSTGEPKIIDLRDFSDEGAVPLQRVTPAGDVVEIAGRRLSGFGRVAALNTSG
                     PYYGGTIREIPLGEPPASDLNGNGKSSDTLVVLVTRATDGWVLLADTDGDGSLTGERP
                     VHDYLLARETFGWASRGRSPRITVAANFSVGSASSDPLLDLVFDISSHGSHVAGIAAG
                     HDLYGVPGFDGVAPGAQLLGLKIANSAQGSITTTGSMIRAIDYAIRFASGRHLPLVLN
                     LSFGVGNEIEGTARIDAMVDSVLVANPGLVFTVSAGNDGPGLSTLGFPGSAKRAISVG
                     ATLPASFLAPGAGGAPRDDQVAYFSSRGGELAKPDLVTPGVAYSTVPRWSTGQEIEQG
                     TSMAAPHAAGLAALLVSGLAQEKHPIDARAIKQALMVTARPLQGATFLDEGTGLPDVS
                     AAYR"
     gene            complement(1543..3174)
                     /locus_tag="VGQ24_06785"
     CDS             complement(1543..3174)
                     /locus_tag="VGQ24_06785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEV8454578.1"
                     /translation="MSPTGSRLRALTEEYRGLAARLQEGGGAARIAKMHQQGKLAPRE
                     RVQRLLDPDTPWLELGLLVAYDRYEGQAPGAGVITGVGVVEGREVVVVANDATVKAGS
                     WWPETIRKILRAQEVAMRQRIPIVYLVDSAGVNLPYQEGVFPGQYGAARIFYYNSIMR
                     RYLQVPQISAVMGSCVAGGAYLPALSDVIFMVDGTSFMGLGGPNLVKGATGQTIDSET
                     LGGAKTHTEVSAVAHYRAANDTECLSRIRDYIARLPRIHGVGHNIRPTRPPTRPPTDL
                     YDILPQDHRLSYDMRQILACLLDDGALDEFQPDVAREMICGHAHVEGHPVALIANQRG
                     IVKGQPGERPRFGGIVYTGSAEKVAYFIETASRERLPIVFIQDVSGFMVGPEAEHSGI
                     IRAGARFVEAMATAVAPKIVLTINHASGAGYYAMAGQGFDPDFILSWPTGRMGVMEGE
                     SAVMAVHGTEVEKARREGREPSAEAKASMESMRADYEQQLDARFAGARGYVDAIVTPE
                     ETRDQLAFTLRIAANYAGPHLGPFVLPPLDAAPAR"
     gene            complement(3171..>3541)
                     /locus_tag="VGQ24_06790"
     CDS             complement(3171..>3541)
                     /locus_tag="VGQ24_06790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cobalamin B12-binding domain-containing protein"
                     /protein_id="HEV8454579.1"
                     /translation="LDGHDRGAKVVAAALRDAGMEVVYTGLHQTPEMIATAAVQEDVD
                     VVGLSILSGAHMTLFPRVRQLLTDMGRPDTLITGGGIIPPEDMNDLQKQGIGKLFGPG
                     TPTTELIEYIQSWAESHLES"
BASE COUNT          598 a         1183 c         1168 g          592 t
ORIGIN      
        1 cgataagcag cactgacgtc gggcagaccg gttccctcat cgaggaacgt ggctccctgc
       61 agcggccggg cggtgaccat cagtgcctgc ttgatggcgc gggcatcgat cggatgcttc
      121 tcctgcgcca ggccggacac aagcagggcg gcaagaccgg ccgcgtgtgg cgccgccatg
      181 ctggtcccct gttcgatctc ctgacccgtg ctccagcggg gaacggtcga gtaagccacc
      241 cccggggtga cgagatccgg tttcgcgagc tcgcctcctc tggagctgaa gtaggccacc
      301 tgatcgtcac ggggggctcc acctgcaccg ggggctagaa agctggcggg caaggtggcg
      361 cccacgctga tcgcacgttt ggccgagccg gggaaaccga gcgtggagag gcccggtccg
      421 tcgttaccgg cgctgacggt gaacaccaga ccggggttcg ccacaagcac cgagtccacc
      481 atcgcgtcaa tccgggcggt cccttcgatc tcgttgccga cgccgaagct cagattgagc
      541 accagcggaa gatgacgccc actggcgaac cggatggcgt agtcgatcgc cctgatcatg
      601 ctgccggtgg tggtgatgct tccctgcgcg ctgtttgcga tcttgagccc gagtagctgc
      661 gcaccgggcg ccaccccgtc gaagccgggg accccgtaca gatcgtgtcc ggcggcgatg
      721 ccggcgacgt gggatccgtg actgctgatg tcgaacacga ggtcgagcag cggatcggat
      781 gaggcggagc cgaccgagaa attggcggcc accgtgattc ggggcgagcg gccgcgagaa
      841 gcccacccga acgtttcgcg tgccaggagg tagtcgtgca ccgggcgttc gcccgtcagg
      901 gacccgtcgc catcggtgtc ggcaagcaga acccagccgt cggtggcccg ggtgacgagc
      961 accacgagcg tgtcgctgga cttcccgttg ccgttgagat ccgaggcggg aggctcgccg
     1021 agcgggatct cccggatggt gccgccataa tacggtccgc tcgtgttcaa cgcggccacc
     1081 cgcccgaatc cgctcagccg gcggcccgcg atctcgacaa catcgccggc cggcgtcacc
     1141 cgctggagcg gcaccgcacc ctcgtccgag aaatcccgca gatcgatgat cttgggctcg
     1201 ccggtggacg tttttgcgag gccgggaata cccgcgtcga tgccggtatc cagaatcccg
     1261 atgagcacgt tgcgcccgtc gtaattggga tgagcccgaa gaaactggtc caccccggtg
     1321 ctcgcgagcg acatccagcc gtgagcgtac gccgcatcgg cgggcaccat cgggcggagg
     1381 gtatcctccg gctccgggct aggctccgcg gccactggcg gcttgcgacc gggatcaatg
     1441 ttgggcttcg ggagggggcg ctccggcggg gtctgcttgg cggcgcaggc aaccagcagc
     1501 acgaaagccg cactgcgaaa actggggaaa ggcatgcggc tcctagcggg ccggggcggc
     1561 gtcgagtggc gggagcacga agggaccgag atgcggtcca gcgtagttcg ccgcaatgcg
     1621 aagggtgaag gcgagctgat cgcgagtctc ttccggagtg acgatggcgt ctacataacc
     1681 gcgggcaccc gcaaaccggg cgtccagttg ctgctcgtag tcggcccgca tcgattccat
     1741 tgacgccttg gcctcggccg aaggctcgcg gccctcgcgc cgggccttct cgacctcggt
     1801 cccgtgcacc gccatcacgg ccgactcacc ttccatgacc cccatccggc cggtcggcca
     1861 ggagaggatg aagtcgggat cgaatccctg tcccgccatg gcgtagtacc ctgccccgga
     1921 agcgtggttg atggtgagga cgatcttggg ggccacggca gtcgccatcg cttcgacgaa
     1981 acgggcgccg gcccggatga tgcccgagtg ctccgcctcg ggtccaacca tgaagccgct
     2041 cacgtcctgg atgaacacga tcgggagccg ctcccggctt gccgtctcga tgaagtaggc
     2101 caccttctcc gcgctcccgg tgtaaacgat gccgccgaac ctgggccgct cgcccggttg
     2161 gcccttgacg ataccgcgct ggttggcgat cagcgccacc ggatgaccct cgacgtgcgc
     2221 gtgcccgcag atcatctctc gcgccacgtc cggctggaac tcgtccagcg ctccgtcatc
     2281 gagcaggcag gcgagaatct gccgcatgtc atacgacagc cgatgatcct gaggcaggat
     2341 gtcatacagg tcagtcggcg ggcgggtagg cggacgggtc gggcggatgt tatgtcccac
     2401 gccgtggatc cgggggagcc tcgcgatata atcccgaatg cggctgaggc actccgtgtc
     2461 gttggcggcg cgatagtgcg ccaccgcgct cacttcggtg tgggtcttgg ccccaccgag
     2521 agtctccgag tcaatggtct gcccggtcgc gcctttcacc aggttggggc cgccaagacc
     2581 catgaagctg gtaccatcga ccatgaagat gacgtcggag agcgcgggaa ggtatgcacc
     2641 gccggccaca caactcccca tgaccgcgct gatctgcgga acctggagat accgccgcat
     2701 gatcgagttg tagtaaaaga ttcgggcggc cccatattgc cccgggaaca cgccctcctg
     2761 gtagggaaga ttgacccccg cactgtccac caggtagacg atggggattc gctgccgcat
     2821 ggcgacttcc tgggcgcgga gaatcttcct gatggtctcc ggccaccagg agcccgcctt
     2881 caccgtcgca tcattggcca ccaccaccac ctctcgcccc tccacgaccc cgacaccagt
     2941 gatcaccccg gcaccggggg cctggccctc gtatcggtca tacgccacca ggagcccgag
     3001 ctccagccag ggggtgtccg gatcgagtag ccgctgcact cgctctcggg gcgccagctt
     3061 cccctgctgg tgcatcttgg cgattcgggc ggcgccgccg ccttcctgga gtcgcgcagc
     3121 aaggccccga tattcttcgg tgagcgcgcg caggcggctg ccggtggggc tcatgactcc
     3181 aggtgagact cggcccacga ctggatgtat tcgatcagct cggttgttgg cgttccgggt
     3241 ccaaagagct tcccaatgcc ctgcttctgc aagtcgttca tgtcctcggg ggggatgatc
     3301 ccgcccccgg tgatcagcgt atcggggcgt cccatgtcgg tcaaaagctg gcgcacccgg
     3361 ggaaaaaggg tcatatgcgc gccggacaga atcgagagcc ccaccacgtc cacgtcttcc
     3421 tgtaccgcgg cagtcgcgat catttccgga gtctgatgca gtccggtgta caccacctcc
     3481 atgccggcat cgcgcaaagc agccgccacc accttggctc cacgatcatg cccgtcaagc
     3541 c
//
LOCUS       DASYRV010000264         9905 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1346375, whole genome shotgun sequence.
ACCESSION   DASYRV010000264 DASYRV010000000
VERSION     DASYRV010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9905
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1346375"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1941)
                     /gene="carB"
                     /locus_tag="VGQ24_06795"
     CDS             complement(<1..1941)
                     /gene="carB"
                     /locus_tag="VGQ24_06795"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEV8454580.1"
                     /translation="MPRRTDLSTILLIGSGPIVIGQGAEFDYSGTQAIKALKEEGYRV
                     VLVNSNPATIMTDPELADRTYIEPVTPEWVAKVIERERPDALLPTMGGQTGLNVAMAL
                     QRDGTLARYGVELIGANERAIRLSEDREEFAQAMVRIGLATPEGRTVRSVEEGLEAVE
                     ATAYPAILRPSFTLGGSGGGIAYNREEFEVLLRRGLELSPVGSVLVERSVIGWKEFEL
                     EVMRDGADNVVIVCSIENLDPMGVHTGDSITVAPAMTLTDREYQIMRDSAIRIIREIG
                     VAAGGCNIQFAVSPTTGEQLVIEMNPRVSRSSALASKATGFPIARIGTKVAVGYRLDE
                     LPNDITRTTPASFEPVLDYVVVKIPRFAFEKFPSADPTLTTQMKSVGEVMAIGRTFKE
                     AFQKGLRGLEADRAGWTVAAVPADDRLQDTSREALLAAIRTPTPERIFQLKYALQLGI
                     PVDDLAERTGIDPWFLHQLAELLEAEEGWRVSGAGAPWAGGRVGRKTGAKAEDEEQHK
                     HLLRMKRLGFSDRQLADLRGTSESSIRAERHRLRIRPAYKTVDTCAGEFPSSTPYLYS
                     SYDEENEAGPNGTRTVVILGSGPNRIGQGVEFDYCCVRAALAFRELGYRTVMVNSNPE
                     TVSTDFDISDKLYFEPLTFEDVI"
     gene            complement(1925..2878)
                     /locus_tag="VGQ24_06800"
     CDS             complement(1925..2878)
                     /locus_tag="VGQ24_06800"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEV8454581.1"
                     /translation="MKILVTGADGFVGRHLVRRLVETGHGVTAACRPGGEPLESWLGE
                     SWREAVRVRPIELTDASSVESAVSAPIDAVVHLAAMASGGDARRDPAGAWVVNAAGTA
                     RVVDAAARLRAAGSADPLLVVVSTAEVYGKGKASPRRESDPLCPQSPYAASKAGAELA
                     ALEAWRRTGLRVVIARPFPHTGAGQLSQYVVPAFVERLRTAKATGASQVPTGNLDPVR
                     DLLDVRDVVEAYLGLLTGGVPGEAYNVARGEGVTLRQLFQQLAELMGIRAEPVLDPSL
                     VRTADIPHLVGDSAKLRKATGWSPTLSLEQTLREMVDAQAH"
     gene            complement(2892..3857)
                     /gene="gmd"
                     /locus_tag="VGQ24_06805"
     CDS             complement(2892..3857)
                     /gene="gmd"
                     /locus_tag="VGQ24_06805"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008446 - GDP-mannose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEV8454582.1"
                     /translation="MPKALITGVTGQDGSYLAELLLSKGYEVVGVVRRTSHHSYERIE
                     HLLDRIEVVAADLLDQHSLTVVLQDTRPDEVYNLAAQSYVPTSWTQPVLTGEFTALGV
                     TRILEAVRLVHPSAKFYQASSSEMFGRAAETPQSETTSFYPRSPYGVAKVYGHWITVN
                     YRESYDLYAVSGILFNHESPRRGIEFVTRKVTDGVARIKLGLARELRLGNLDARRDWG
                     FAGDYVDAMWRMLQQPVPRDYVIGTGRTHSVRELVEAAFGHVGLDWHKHVVTDPKYIR
                     PAEVDLLQADPSKAQRELGWTPTVGFNELVAMMVDTDLMRLRERR"
     gene            3950..4141
                     /gene="rpmB"
                     /locus_tag="VGQ24_06810"
     CDS             3950..4141
                     /gene="rpmB"
                     /locus_tag="VGQ24_06810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014398134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEV8454583.1"
                     /translation="MARVCAVCAKGPVTGNNVSHANNRSKRRWYPNLQTVRILVDGAP
                     KRIRVCTQCLKSNRIRKAS"
     gene            complement(4254..4610)
                     /gene="rplQ"
                     /locus_tag="VGQ24_06815"
     CDS             complement(4254..4610)
                     /gene="rplQ"
                     /locus_tag="VGQ24_06815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEV8454584.1"
                     /translation="MRHRAKGRQLSRTSTHKRAMLNNMATSLFAHGRVITTEAKAKEL
                     RPFAEKLITLARRGDLHARRLVQRRIKDRETLGLLFREIGPRFAARPGGYTRILKLGH
                     REGDGADVARIELLAE"
     gene            complement(4610..5668)
                     /locus_tag="VGQ24_06820"
     CDS             complement(4610..5668)
                     /locus_tag="VGQ24_06820"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:NF003513.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEV8454585.1"
                     /translation="MTIDLTGLVRPHLVEMTKRDDNPNAAEFRLQPLERGFGYTLGNS
                     LRRLLLSSLRGSAVWGFRLDGVVHEHQTVQGVLEDVHQIVQRLKALTLVLAEDVDDAV
                     LHIRREGAGPVYARDIQEHGSVVVKNPDHLLFTLQDDRDVSMELYVNKGRGYVEAEMH
                     PADRSLPIDLVRVDAIYNPVRRANFTVAETRVGQRTDYDRLTVSVETNGTITPEDAIA
                     YAAALAQVHFQYFVDFGKVPTMRDAGAAAGAGAGSNLRLRLARPIDDFGLSVRSLNSL
                     KNSNIRTLKDLVEFTEDDLLKVKNVGEKALSEIAELLQREGLNFGMGFEETDGELRVV
                     RPGVAPVVQPSTGAGDGL"
     gene            complement(5712..6119)
                     /gene="rpsK"
                     /locus_tag="VGQ24_06825"
     CDS             complement(5712..6119)
                     /gene="rpsK"
                     /locus_tag="VGQ24_06825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEV8454586.1"
                     /translation="MTAPAPVPAKAPSAKRAKKVVDTEGIAHISATFNNLLITITDMR
                     GNTLAWGSAGKAGFKGSKKSTPFAATVAAENCGREAMNLGLRRVHVRVQGPGSGRESA
                     IQALASVGLRVVSIRDVTPIPHNGCRPPKKRRV"
     gene            complement(6121..6501)
                     /gene="rpsM"
                     /locus_tag="VGQ24_06830"
     CDS             complement(6121..6501)
                     /gene="rpsM"
                     /locus_tag="VGQ24_06830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEV8454587.1"
                     /translation="MARIAGVDLPREKRVEIALTYIFGIGRPTSSRILGETGVNPDTR
                     VRDLSDAEVARLRQMIERSVKVEGALRTEVAMNIKRLMDIGSYRGIRHRRGLPVRGQR
                     THTNARTKKGPRRAIAGKKKVTKK"
     gene            complement(6504..6620)
                     /gene="rpmJ"
                     /locus_tag="VGQ24_06835"
     CDS             complement(6504..6620)
                     /gene="rpmJ"
                     /locus_tag="VGQ24_06835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020322760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEV8454588.1"
                     /translation="MKVRSSVKPICEHCKVIKRQGVVRIICKRNPKHKQRQG"
     gene            complement(6724..7140)
                     /locus_tag="VGQ24_06840"
     CDS             complement(6724..7140)
                     /locus_tag="VGQ24_06840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454589.1"
                     /translation="MHRLLIAYALMGIPAAGMAQATDLDAAAERARQAWFAHDAATLV
                     ANSPRLLIQLPGADPSVALGPAQAAALLTDFVAPAQEVETVVRAAREVEPGRGYVELQ
                     RQYRVAGTQNVRIQILLLGYRLNETGWSLVEFRVVS"
     gene            complement(7125..7817)
                     /gene="pyrF"
                     /locus_tag="VGQ24_06845"
     CDS             complement(7125..7817)
                     /gene="pyrF"
                     /locus_tag="VGQ24_06845"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF012441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEV8454590.1"
                     /translation="MSELILALDVPRGVDALRLLDQLPELRWVKLGPVLMTREGPALV
                     RELTGRDLRVFLDLKWHDIPNTVAGAVTAARELGVAMATVHILGGKAMLEAAAVAAAS
                     ELALLGVTVLTSHDAPSYAGATGRPEVDLNREVERQGVIAAEAGLRGVVCSPQEVSLL
                     RRRLGPELYIVVPGIRRRSDPSADQARVATAKDAVRNGATHLVVGRPVLQAADPAATF
                     AEFMKEARCIGS"
     gene            complement(7810..8688)
                     /locus_tag="VGQ24_06850"
     CDS             complement(7810..8688)
                     /locus_tag="VGQ24_06850"
                     /EC_number="1.3.1.14"
                     /inference="COORDINATES: protein motif:HMM:NF005574.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HEV8454591.1"
                     /translation="MERLDLSRELLGQRFQNPLLLAAGTAGFGRELDGVLDLDRLGGL
                     VTKAVSLKSRSGNPAPRVGEFPGGMLNSVGLANPGVERVRAEHLPWLANRLSRARILV
                     NVVGFTVEEYGEVVGRLEGVPGITAFELNLSCPNTSAGGIEFGADAACVRRIVAACRS
                     RTRLPLIAKLSPVLPDIAAIALVARDAGADAVSAVNTLPGLLFGANGQARLGQGYGGV
                     SGPVLLPVGILAVSRIVERTGGMPVIGAGGVRSAADVRQYLRAGASLVAMGTGALADP
                     HLPERIIRELERGSDV"
     gene            complement(8688..>9905)
                     /locus_tag="VGQ24_06855"
     CDS             complement(8688..>9905)
                     /locus_tag="VGQ24_06855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEV8454592.1"
                     /translation="RGVALARLGQCEQALGALSRVPLDSKPNDLTEDALLATGRCQLA
                     LGNIPASEAAFSQLLDSKNRERRREAHFQQARLLRQSGRYREALRALEGVKDPRADSE
                     RILALAGAGRLPQALALADSLIARRDTTRPWDSLVVMMGQQNPAAASRLLDRIRPLRV
                     PSPEVQARRLLEDGIRLAHTDTARAAGRFREAISIGGSNAAAGRASLQLTLLDLRRAR
                     RVADLPPVIQALKAVSDRFETAAYEATQLGAIVESIHGAATSVTWETPRGDLRLFLAA
                     EAARDSLRAPALAEGLFHRILDDYPNSSYAAKVVLATQQLDSTWADSARGLLEGRYLD
                     SPYLAVIRGEWSEEYRQLEDSLGAYAATLAVKPPTVKRPAGGVRRIPAVRDDVDEPNR
                     RPPAPGTPKVPEP"
BASE COUNT         1688 a         3332 c         3214 g         1671 t
ORIGIN      
        1 gatcacgtcc tcgaacgtga gcggctcgaa gtacagcttg tcggagatgt cgaaatcggt
       61 cgagaccgtc tccgggttgg agttcaccat cacggtgcgg tatcccagct cccggaacgc
      121 aagcgccgcc cgcacgcagc agtagtcgaa ctcgaccccc tgcccaatcc ggttgggacc
      181 gctgcccaga atcaccacgg tgcgggttcc gttcggcccg gcctcgttct cctcgtcgta
      241 ggacgagtac aggtagggcg tcgatgaggg aaactcgccg gcgcaggtgt ccacggtctt
      301 gtacgcgggt cggattctca ggcggtgacg ctcggcacgg atggaggact cgctggtacc
      361 gcgcaagtcg gcgagctgcc ggtcggagaa gccgagtcgc ttcatcctga gcaggtgttt
      421 gtgctgctct tcgtcttccg ccttggcccc ggttttcctg cccaccctcc cacccgccca
      481 gggggcaccc gccccgctga cccgccaccc ctcctccgcc tcgagcagct cagcaagctg
      541 atgcaggaac cacgggtcta tgccggttct ctcggcaagg tcatcgaccg gaatcccgag
      601 ctggagcgcg tacttgagct gaaagatccg ttcgggtgtc ggcgtccgga tggcggcgag
      661 aagcgcctcg cggctggtat cctggaggcg atcgtccgcc gggaccgcgg cgaccgtcca
      721 gcccgctcgg tccgcttcca gtccgcggag ccccttctga aacgcctcct tgaaggtccg
      781 accgatggcc atgacttcgc cgaccgactt catctgggtc gtgagggtag gatcggccga
      841 gggaaacttc tcgaaggcga agcgggggat cttgaccact acatagtcga gcaccggctc
      901 gaaggaggcg ggcgtggtcc gggtgatgtc gttcggcagc tcgtccagcc ggtaccccac
      961 cgccaccttg gtcccgatac gggcaatcgg gaacccggtc gccttggagg ccagtgccga
     1021 cgagcgggac acccgagggt tcatctcgat gaccagctgc tcacctgtcg tggggcttac
     1081 cgcgaactgg atgttgcatc cccccgcggc cacgccgatc tcccggatga tccggatcgc
     1141 cgaatcgcgc ataatctggt actcgcggtc ggtcagcgtc atggcaggcg ccaccgtgat
     1201 cgagtcgccg gtatggacgc ccatgggatc gaggttctcg atggagcaca cgatcaccac
     1261 attgtcggcg ccgtcgcgca tgacctccag ctcgaactct ttccagccga tgacgctccg
     1321 ctcgaccagc accgatccga ccggcgagag ctccaggcca cggcggagca gaacctcgaa
     1381 ctcctcgcgg ttgtaggcga tgcctcctcc ggagccgccc agggtaaagg atggccggag
     1441 gatcgcggga tacgccgtgg cctcgaccgc ctcgagcccc tcctcgacac tgcgcaccgt
     1501 gcggccctcc ggcgtggcca ggccgatccg caccatggcc tgggcaaact cctcccgatc
     1561 ctccgacaga cggatggccc gctcattcgc gccgatcagc tcaacgccgt agcgcgccag
     1621 ggtcccatcg cgctgaagag ccatggccac gttgagcccg gtctggcctc ccatggtggg
     1681 aaggagggca tcgggccgtt cccgctcgat caccttggcc acccattcgg gcgtgactgg
     1741 ctcgatatag gtgcggtccg ccagttcggg atcggtcatg atggtggccg ggttcgagtt
     1801 gaccagcacc acccggtaac cctcttcctt gagcgcctta atggcctgag tgcccgaata
     1861 gtcgaactcg gccccctggc cgatcacgat cgggccggag cctatgagga ggatggtcga
     1921 aagatcagtg cgcctgggca tccaccatct cccgcagagt ctgttccagc gagagggtcg
     1981 gtgaccatcc cgtggctttc cgaagtttgg ccgagtcgcc gaccaggtgc ggaatgtcgg
     2041 cggtgcgcac cagcgatgga tcgagtaccg gctcggcccg gatccccatg agctcggcga
     2101 gctgttggaa cagctggcga agcgtcacgc cttcgccccg cgcaacgttg tacgcctcac
     2161 cgggaacgcc gcctgtcaga agaccgaggt aggcttcaac cacatcgcgc acgtcgagca
     2221 ggtcacgcac cggatcgagg tttccggtcg ggacctggct ggcgccggtt gccttggcgg
     2281 tgcgcagccg ctcaacgaag gccggcacca cgtattgtga aagctggccc gcgccggtgt
     2341 gcgggaacgg acgcgcgatc acgacccgga gcccggtccg gcgccaggcc tccagggccg
     2401 cgagctcagc gcccgccttg ctggccgcat agggcgactg gggacagagc gggtcgctct
     2461 cccggcgcgg tgatgccttg cctttaccgt agacctccgc cgtcgagacc accaccagca
     2521 gtggatcggc agaaccagcg gcgcggagcc gagccgcggc atcaaccacc cgggcggtcc
     2581 ccgccgcatt gaccacccac gccccggccg ggtcacgccg tgcatcgccg cccgacgcca
     2641 tcgcagccag atgcacaacc gcatctatcg gggcgctcac ggcactctca accgaggatg
     2701 catcggtgag ctcgatgggt ctgacccgta ccgcttctcg ccaactctcc ccgagccagc
     2761 tctccagcgg ctcgccaccg gggcggcatg ccgccgtcac cccatgcccc gtctcgacca
     2821 gccgacgaac caggtgacgt cccacgaagc cgtcggcccc ggtcaccaat atcttcacga
     2881 aggacggcct ctcaccgacg ctcgcgcaat cgcatgagat cggtgtctac catcatcgcc
     2941 accagctcgt tgaaccccac ggttggggtc cagcccagct cccgctgagc cttcgaagga
     3001 tccgcctgga gcaggtccac ctccgccggc ctgatgtatt ttgggtcggt gaccacgtgc
     3061 ttgtgccaat cgagtccgac gtgcccaaac gcggcttcca ctagttcgcg tacactgtgg
     3121 gtccggccag ttccgatgac atagtctctt ggcaccggct gctggagcat gcgccacatc
     3181 gcatcgacgt aatcgccggc gaagccccag tcccggcggg cgtccagatt gccgagccgg
     3241 agttcccgtg ccagcccgag cttgatcctg gcgacgccgt cggtgacctt ccgggtgacg
     3301 aattcgatgc cccgacgcgg cgattcgtgg ttgaagagaa tcccgctgac cgcgtacaga
     3361 tcgtacgact cccggtagtt caccgtgatc cagtgaccgt agaccttggc cacgccgtag
     3421 ggcgaccggg gatagaacga ggtggtctcg ctctgcggcg tttcggccgc ccggccgaac
     3481 atctccgagg agctggcctg atagaacttg gccgacggat gcaccagacg gaccgcctcc
     3541 agaatccggg tgacaccgag tgcggtgaac tcgccggtga ggaccggctg agtccaggat
     3601 gtcggcacgt aagactgggc cgccaggttg tagacttcgt cgggcctggt gtcctgtaag
     3661 acgaccgtga gggagtgctg atcgagcaga tcggcagcga ccacttcgat ccggtcgagc
     3721 aggtgctcga tgcgctcgta gctgtggtgg ctggtccggc ggaccacacc cacgacctcg
     3781 tatcctttcg agagcagcag ctccgcgagg taggacccgt cctggccggt cacgccggtg
     3841 atgagggctt taggcaatgt cggtagcggg gctgagttgt gtcatccggc tgggctcgtt
     3901 agttttacgc gctcgctgcg ttacgacacg aatgaagagg gtggagctta tggcacgggt
     3961 atgcgccgtg tgcgccaaag ggccggtcac cggcaacaac gtcagccacg cgaacaaccg
     4021 aagcaagcgt cgctggtatc ccaatctcca gacggtgcgc attctagtgg atggcgcgcc
     4081 gaaacggatc cgggtgtgca cccagtgcct gaagagtaat cggatcagga aggccagctg
     4141 atctgtgggg cgcgccgcgg tgcgctccca tctggatgtc tgaaaaaagg ggacccgaag
     4201 gtcccctttg tcttttcttg cctgggccgc acggccgtgc ggactcacag ctcctactcg
     4261 gcaaggagct cgatcctcgc cacatcagcg ccgtctccct cacggtggcc aagcttcaga
     4321 atccgggtgt agccccctgg ccgggcggcg aatcgcggcc cgatctcacg gaagagcagg
     4381 ccgagcgtct cccggtcctt gatccgccgc tgcaccaggc gtcgggcgtg caggtcgccg
     4441 cggcgagcca gcgtaatcag cttttcggca aacgggcgga gctccttggc cttggcctcg
     4501 gtcgtgatca cccggccatg ggcgaagaga ctggttgcca tgttattcag catcgcccgc
     4561 ttgtgagtcg aggtccggga gagctggcgg cctttggcgc ggtgccgcat tagagcccgt
     4621 cccccgcccc ggtagacggc tgcaccaccg gcgccacacc aggccgtacg acccgaagct
     4681 cgccgtcggt ctcttcgaag cccatgccga agttgaggcc ctcgcgctgc aacagctcgg
     4741 caatctcgct cagcgccttc tcgcccacgt tcttgacctt gagcaggtcg tcctccgtaa
     4801 actcgaccag atccttcagc gtccggatgt tggagttctt gagcgagttg agcgagcgca
     4861 ccgaaagacc gaaatcgtcg atcggccggg ccagccgcag gcgcaggttg ctgcccgcac
     4921 cggcgccagc cgcggcaccc gcgtcgcgca tggtgggcac cttgccgaaa tccacgaagt
     4981 actggaagtg cacctgcgcc agtgcagcgg cgtaggcgat ggcgtcttcc ggcgtgatgg
     5041 tcccgttggt ctctaccgag acagtcaggc ggtcgtagtc ggtccgctgg ccgacacggg
     5101 tttccgccac cgtgaagttg gcccggcgca ccggattgta gatggcatcc acgcggacca
     5161 gatcgatggg cagcgagcgg tcggccgggt gcatctcggc ttcgacgtag ccgcggccct
     5221 tgttgacgta gagctccatg ctgacgtcgc ggtcatcctg cagcgtgaag agcagatgat
     5281 cggggttctt cacgacgacc gagccgtgct cctggatgtc gcgcgcgtag accggcccgg
     5341 cgccctcgcg gcgaatgtgc agaacggcat catccacatc ctcggccagg accagggtca
     5401 gggccttgag ccgctgcaca atctgatgta cgtcctcgag cacgccctgc accgtctgat
     5461 gctcgtgcac gacgccatcg aggcggaacc cccagacggc gcttccccgg agcgaggaaa
     5521 ggaggagacg ccggagcgag ttgcccaggg tatagccgaa cccgcgctcc agcggctgga
     5581 gccggaactc ggcagcgttc gggttgtcgt cccgcttcgt catctcgacg agatgcgggc
     5641 gtaccaatcc agtcaggtca atggtcatgg tcacttcgag tagagctcca gagtgagctg
     5701 tttggccgtt atcagacccg gcgcttcttg ggaggacggc acccgttgtg aggaatcggg
     5761 gtgacgtcgc ggatcgacac gactcgcaat ccgactgagg cgagtgcctg aatggccgac
     5821 tcacgcccgc tgccggggcc ctgaacccgt acgtggaccc gccggagccc gaggttcatg
     5881 gcctcacgac cgcagttctc ggcggcgacg gtggccgcga acggggtgga cttcttcgag
     5941 cccttgaatc cggccttgcc ggccgagccc cacgcgaggg tgttgccccg catatcggtg
     6001 atggtgatga gcaggttgtt gaacgtggcc gatatgtggg cgatcccctc ggtatcgacc
     6061 accttcttgg cacgcttggc gctcggcgcc ttggccggta cgggtgcggg tgcggtcatc
     6121 ttacttcttc gtcactttct tcttaccggc gatagcacgc cgcggaccct tcttggtccg
     6181 tgcattggta tgggtgcgct ggccccggac cggaagaccc cggcggtgcc gaatgccacg
     6241 atagctcccg atgtccatca ggcgcttgat gttcatggcc acttcggtcc ggagcgcgcc
     6301 ctcgaccttg accgagcgct cgatcatctg gcgcagccgc gccacttcgg cgtccgacag
     6361 atcgcggact cgggtatccg ggttgacgcc tgtctcgccg agaatgcggc tgctggtggg
     6421 acggccgatg ccgaagatat aggtaagcgc gatctcaacg cgcttctcgc gcggaaggtc
     6481 cacgcctgcg atacgcgcca tgatcagcct tgccgctgtt tgtgcttggg attgcgcttg
     6541 cagatgatgc ggaccacgcc ttgtcgcttg atgaccttgc agtgctcgca aatcggcttg
     6601 acgctcgaac gcaccttcac tcggatctcc ggggccaggt tatgggctag ctcggcaata
     6661 taggagaggt cctaatgaga cgcaagtgaa agtggatgcc cctcctagct actcccatcc
     6721 ggctcaactc accacccgga attcaaccag gctccagccg gtttcattca gtcggtagcc
     6781 gagcaggagg atctgaatcc ggacgttctg ggtgcccgca acccggtact gacgctggag
     6841 ctcgacatag ccgcggccgg gctcgacctc ccgggcggcg cgaaccacgg tttcgacctc
     6901 ctgcgccggg gccacgaagt cggtgagcag cgccgccgcc tgtgccggac ccagcgccac
     6961 cgacggatcg gccccgggga gctgaatcag aagccgcgga ctattggcga ccagcgtcgc
     7021 ggcatcatgc gcgaaccagg cctggcgagc ccgctcggca gccgcgtcga ggtccgtcgc
     7081 ctgcgccatg cctgcagcgg gaatccccat cagggcatag gcgattaaga gccgatgcac
     7141 cgcgcctcct tcatgaattc cgcgaacgtc gcggccggat cggccgcttg gagcacgggt
     7201 cggccgacca ccagatgggt cgcaccgttg cggacagcgt cctttgcagt ggccaccctg
     7261 gcctggtctg cgctggggtc cgagcgacgc ctgatgcctg gcaccacgat atagagctca
     7321 ggcccgagcc gcctacgcaa gagcgatacc tcctggggag agcacaccac gccccgtagt
     7381 ccggcttccg ccgcaatcac cccctgccgc tcgacctcgc ggttcagatc gacctcgggg
     7441 cggccggtgg cccccgcgta cgagggggca tcgtgcgagg tcaacacggt gacacccagg
     7501 agtgccagct cggaggcggc cgcgacggca gcggcctcga gcatcgcctt gcctccaagg
     7561 atatgaaccg tggccatagc aacgccgagc tcgcgcgccg cggtaaccgc accggccacg
     7621 gtattcggga tatcgtgcca cttgaggtcg aggaagactc ggagatcccg cccggtcaac
     7681 tcgcggacca gcgccgggcc ttcgcgcgtc atcagcacgg gacccagctt cacccaacgg
     7741 agctccggca gctggtccag caaacgaagc gcgtcgacgc ctcgaggcac gtcgagcgcc
     7801 aggatgagct cagacatcgg aaccgcgttc cagctcgcgg atgatccgct ccggcaggtg
     7861 ggggtcggcg agcgctccgg tgcccatggc gaccagcgag gcgccagccc tcaggtattg
     7921 acggacatcc gcggcagatc gtacgccgcc cgctccgatg acgggcatgc ctccagtccg
     7981 ctccacgata cgagacaccg cgaggatacc gaccgggaga agcacggggc cgcttacgcc
     8041 accatagcct tgtcccagac gcgcctgccc gttggcgccg aagaggagcc ccggcagcgt
     8101 gttcaccgca ctcaccgcgt cggctccggc atcccgcgca acgagcgcga ttgcggcgat
     8161 gtcggggagt actggagaca gtttggcgat caggggaagc cgggttcgag accggcacgc
     8221 cgcaacgatg cggcgaacac aggcggcatc ggctccgaac tcgatgccac cggcactggt
     8281 attgggacag gagagattca gctcgaaggc cgtgattcct ggaaccccct ccagccggcc
     8341 aaccacctca ccgtactcct ctacggtgaa cccaaccacg ttgaccagaa tccgagcccg
     8401 gctcaagcga ttggccagcc agggcaggtg ctctgcccgc acccgttcga caccggggtt
     8461 ggcgaggccc accgaattga gcatgccgcc gggaaactcc ccgactcgag gagcaggatt
     8521 ccccgacctt gatttcagcg agaccgcctt ggtcaccaac ccgccgaggc ggtcgaggtc
     8581 gagcacgccg tcgagctctc ttccgaagcc ggccgtacca gcggcgagaa ggagaggatt
     8641 ctgaaaccgc tgacccaaca gctcgcggga gaggtcgaga cgctccacta gggctcggga
     8701 accttgggcg tgcccggcgc gggaggacga cgattgggct cgtccacatc gtcacgcacg
     8761 gctggtatcc ggcgcactcc gccggcgggc cgcttcaccg tgggtggctt caccgcgagc
     8821 gtcgccgcgt aggcaccgag ggaatcctcc agctgtcggt actcctcgga ccattcaccc
     8881 cggatcacgg cgaggtaggg actgtcgaga tagcgtccct ccagcagtcc tctggccgaa
     8941 tcggcccagg tggagtccag ctgctgagtc gcgagcacca ccttggccgc gtacgaagaa
     9001 ttggggtagt catccaggat ccggtggaag agtccctccg ccagcgccgg cgcccggagc
     9061 gagtcgcgcg ccgcttcggc ggcaagaaaa aggcggagat caccgcgagg agtttcccaa
     9121 gttaccgagg tcgcggcgcc gtggatgctt tcgacgatag cgccgagctg ggtcgcttcg
     9181 taagccgcag tctcgaagcg atccgaaacc gccttgagcg cctggatcac tgggggcaga
     9241 tccgctaccc gccgggcgcg gcggagatcc aagagggtca actgaaggct ggctcgaccc
     9301 gcggcggcgt tgcttccgcc gatggagatc gcttcccgga agcgtcctgc agcccgggcg
     9361 gtatcagtgt gggccagccg aatcccgtcc tccagcagcc ggcgggcctg aacctccggg
     9421 gagggaaccc gtagtggccg gatccgatcg agcaggcgtg aggcggcggc tgggttctgt
     9481 tgtcccatca tcaccaccag cgagtcccag ggtcgggtgg tgtcacgcct cgcaatcaat
     9541 gaatccgcta acgcgagagc ctggggcagg cggccggccc cggccagtgc caaaatccgc
     9601 tcgctgtcgg ctcgcggatc cttgacccct tcgagcgcgc gcaacgcctc ccggtagcgc
     9661 ccagactggc ggagcagcct ggcctgctgg aagtgcgcct cacggcgccg ttcccgattc
     9721 ttgctgtcga gcagctggct gaacgcggcc tcgctggccg ggatgttgcc cagggcgagc
     9781 tgacaccgtc cggtggcgag cagcgcatcc tcggtcagat cgttgggttt gctgtccaga
     9841 gggacccgac tcaacgctcc gagcgcctgc tcgcattggc ctagacgggc gagggccact
     9901 ccccg
//
LOCUS       DASYRV010000265        11041 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_937736, whole genome shotgun sequence.
ACCESSION   DASYRV010000265 DASYRV010000000
VERSION     DASYRV010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11041
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_937736"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(52..885)
                     /locus_tag="VGQ24_06860"
     CDS             complement(52..885)
                     /locus_tag="VGQ24_06860"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEV8454593.1"
                     /translation="MATVLLPVERPRVDAAGSGCFAVVHRDSIPDAVRIVRERPVDAV
                     LVSVHRCAPEQVEALGHLVREFPGIPTVALVSQHDPSATEMLLRLGASGVRQVVDVTS
                     PTGWSRLRQVVGQPATRAVARIQGPILDALADTPPDARLFVEALIRVAPDTPTVTSLA
                     QRLYVRPSTLISRFARAGLPSPKNYLAAIRLLHASYLFEAAGLSVADVSYRLEYSSPQ
                     SFGRHLRAMLGLTALEFRHRFPFPVALARFVEVMITPYIPIWRTFHPVAAGSWDSGRE
                     L"
     gene            1095..4193
                     /locus_tag="VGQ24_06865"
     CDS             1095..4193
                     /locus_tag="VGQ24_06865"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEV8454594.1"
                     /translation="MSDTTIDLFTALQAALGSQYRLERELGRGGMGVVFLATDATLDR
                     RVAIKVVHPELALHDAITRRFLTEARTIARVRHPNIVAIHAAGSADGLLYYVMDEVAG
                     ESLRQRLGRESHLSTEETARIVSDVASALDCAGRAGVVHRDVKPENVLLDQATGRALL
                     ADFGIARAVVADSGGSSTGQGVAVGTPVYMSPEQAAGEEIDTRSDLYALGIVAYEMLV
                     GHPPFQGPHRVVVSKHIAERPVPLERLRPDAPGALTGAIMRALEKQPSDRWQTGEEFR
                     QAVAGERPTPHRRRVPQRIVALAAVVLAVLAATIGLVRRSPGPPRGVNPRHSILVLPF
                     DNLRDERSVEWLRDGSVSMLGLNLSQWNDLTVVDHERLHDLLAKHRLKVGDDIGLDMA
                     RRLAREAGVWTVVLGDFTPAGDSLHLVARVFDVASGKRVDVARADDRPGADVRPLFDQ
                     LAAKLLNLSGAPNEIRTGLARSTTQSLEAFRAYLSGVEHLNRWDLAGAERDLERALSI
                     DTTFGLAYYKLALTRGWLVGTEDSIADRAILRATAYSGNLPAHERTVINAYRAFIGGE
                     YREARALYNQLIARDAGDADAWYGLGEAWFHDTAGVNQAPAWTSAMRAFKRTLALDPN
                     YALAYDHVHTMLSQAAATYPLYALLPADSFAIARSVTGQPLVDSATVRSAVQRAQAEA
                     LVSARTWVASQPTTLRAHGAMVNAYVSAGNYKGAMSELERFREATPLHPELPFVEARV
                     RFASGDVDRAAAQLRTALDTVAPGDFRAYDGTTTVVSDIAAAANVFAYQGDLTNAAKA
                     LELADQVRREVIHHPESGSKGDGWRRIALGELYAAAGGPASALRQIWQSAAEAARMAP
                     TEHRKHIAHTGATAAIGLFTGLEADSTALKELQAISGDTNPKEVRALLAVSRGDSAAA
                     RRTLAEPDSSGYGKYMYMVYTRPFAAQAYYLLGEYETTLRVLEGFQASALQTGGFDSR
                     WGMLGRVRLLRGAAYERLGRRAEAREQYRQVLAQWKKADPALLPFIQQAQRGLARVGH
                     AG"
     gene            4286..4667
                     /gene="rnpB"
                     /locus_tag="VGQ24_06870"
     ncRNA           4286..4667
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VGQ24_06870"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            4760..5545
                     /locus_tag="VGQ24_06875"
     CDS             4760..5545
                     /locus_tag="VGQ24_06875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454595.1"
                     /translation="MLLPANRYSALAAAALVLPLLGDAPATTKYRIDQTLSQEIDATP
                     AGGAKQRIAFTTSSFVTVSLADSAGGKVIRVVVDSLRGDSAVPIPAAVLDSARGAEFH
                     GFVAKSGKPSGLQPVPANPAAVQIQGLLSDFFPWVKAGLKVGDSWSDTTAKTDGTGPD
                     SVTVRRVSAYKAAASATWNARKAVRITEDFTSSMAGTQPTPNGPARIEGTGSGKGSYY
                     VSPDGRYLGGNWEQQSSLAISGSFAKQPLPIRIVQKTTVTALK"
     gene            5559..6437
                     /locus_tag="VGQ24_06880"
     CDS             5559..6437
                     /locus_tag="VGQ24_06880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454596.1"
                     /translation="MRPAQILVAVALAGCGSATSTTGGPSGPTPQPGAPNPEVPAPGG
                     GGITYGAVRDAGYALERHDSLTIQLPGGASQQQLIDRTAYLRVAIVPDTAGYVATIVL
                     DSIQAAVGGVPAVPDSVIPARGTRWTASLTPEGRLSALKADRSTTVGDQLGSNLRSLF
                     PSLPSGGVKAGMEWTDTAEVPIRADAFDATERSLTSYRATESDDPRAKKAIKLESTGS
                     YQRRGKGTQYDQQLEMSASGTRTAVHYMNPDGTIASARGSDAGDLTITIPAVGQTVPV
                     KQAGTFSITLLRPSKR"
     gene            complement(6462..6863)
                     /locus_tag="VGQ24_06885"
     CDS             complement(6462..6863)
                     /locus_tag="VGQ24_06885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HEV8454597.1"
                     /translation="MPNPDALKSTEPMPPEERGGFVALAVLAAAVGAGAALLLAPETG
                     SRARKQEHHARRGKRIIALAGFLVGAGLTALLTPESGPATRKRLGGTLSRIKVGAVDR
                     IEHFRQTGAPEPAENPVRSVQELGRDPNDIF"
     gene            complement(6897..8012)
                     /gene="dnaN"
                     /locus_tag="VGQ24_06890"
     CDS             complement(6897..8012)
                     /gene="dnaN"
                     /locus_tag="VGQ24_06890"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEV8454598.1"
                     /translation="MKLTITREQLQEGLVAVAASIPAKTTLPILSNILLEATKDGIRL
                     SGTDLDIAVSTTVSASVDEEGAITLPARKLVEIVRELPSAAIRLTASGEQRVTIECGR
                     SRFKLLGLPREEFPAFPTVKFEGGWRTSSKELQKLIGHVAFAASTEESRPILNGVLWE
                     LRPERMRMVATNGHRLARMDVPTSETQGASQADLIVPPKALDQIRRLFDTDETVEIAR
                     SENHLGFRTSTTQIFTRLIEGPYPNYEQVIPRENDKAATADKAALTAALRRMSIVASD
                     QTHRIRMAFANGSCKLSVQTPDLGEAQEELNVSYEGDPLEIGFNAAYLLEILKYIPTD
                     EVRMTFKAPERAATCEPVGWDDPASYLALVMPLRLVD"
     gene            complement(8242..9624)
                     /gene="dnaA"
                     /locus_tag="VGQ24_06895"
     CDS             complement(8242..9624)
                     /gene="dnaA"
                     /locus_tag="VGQ24_06895"
                     /inference="COORDINATES: protein motif:HMM:TIGR00362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEV8454599.1"
                     /translation="MQLSAKDAWKRILDEAHRELPDHTIRTWLEPTEAIALDEGRLII
                     GAPDQFAVEWNETKHATLLSRLAEPVLGQPTSIVFRVNEDRQKRPQMDFFVAPSAPAV
                     AGVQINPSTQPLNERYTFDTFVIGKSNELAAAAAHAAAESPGKTYNPLFIYGATGLGK
                     THLMQAIAHTVVERHPDTRVLYVGAEQFINEVIESIHSRTMPEFRRRYRSDVDLFLVD
                     DVHFLEGKEMTQEEFFHTFNALYEGNKQIVLTSDRPPKELPGLEARLVSRFEWGMVAD
                     IGQPDLEHRIAILRKKQEQDHLELTIPDDVLRFIAEHVRSNVRELEGCIIKLLLFASL
                     KHKEVSIELAREALSDKIRPGEDGLAAPKALPSINKVQEVVARRWGVTPEGLRSKARI
                     KTLTVPRQIAMYLARELLEMQLVEIGQAFGGRDHSTVIHSVDKVSRQMSRDRGFRERV
                     EHARQELCAE"
     gene            9918..10079
                     /gene="rpmH"
                     /locus_tag="VGQ24_06900"
     CDS             9918..10079
                     /gene="rpmH"
                     /locus_tag="VGQ24_06900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEV8454600.1"
                     /translation="MKPSYRPRNKRRINKHGFRARMATRWGRAVLSRRRKKGRKRLTV
                     SLPSKHGGS"
     gene            10094..10429
                     /gene="rnpA"
                     /locus_tag="VGQ24_06905"
     CDS             10094..10429
                     /gene="rnpA"
                     /locus_tag="VGQ24_06905"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: protein motif:HMM:NF013022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEV8454601.1"
                     /translation="MPRAHRLARASDIRRCLTHGRRRRSEHLDIVWMDNQTGQPRMGL
                     IVPKFQSSAVARNRLRRRLREIWRQEIQQRQPAWDLVIRARREAYAADFDALRTQLRV
                     WREAVLGTG"
     gene            10445..10666
                     /gene="yidD"
                     /locus_tag="VGQ24_06910"
     CDS             10445..10666
                     /gene="yidD"
                     /locus_tag="VGQ24_06910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEV8454602.1"
                     /translation="MWLLPRHLLAGLVRGYQLVISPLLPPSCRFMPSCSQYALEAITR
                     HGAVRGTWLAVRRLVRCHPFHPGGFDPVP"
     gene            10684..>11041
                     /locus_tag="VGQ24_06915"
     CDS             10684..>11041
                     /locus_tag="VGQ24_06915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454603.1"
                     /translation="MDRRTIWAILLMMAIAIAPAIFMKKPRGSAEAGKRGSETAVPAD
                     SSAARALVRQDSVSPRVPTRDTTEAVASPPRAEGATDDTVRVTSPLYTYGISTRGGRL
                     VEATLPRYRSMTPAERG"
BASE COUNT         1909 a         3577 c         3699 g         1856 t
ORIGIN      
        1 ccaagcagta cgggcggctg ggcccctgaa gaacgacgtg ctggagcgag gctaaagctc
       61 ccgaccacta tcccaactgc cggccgcgac cggatgaaac gtccgccaga tcgggatata
      121 tggggtgatc atcacctcca cgaagcgggc aagggccacg ggaaaaggga agcggtggcg
      181 gaactccagg gccgtcagtc caagcatggc ccggagatgg cgcccgaagc tctgaggcga
      241 ggaatactcc agccgatagg agacatccgc caccgagagg ccggccgcct cgaacagata
      301 cgaggcatgc agcagccgga tggcggcgag ataattcttg ggcgacggaa ggcctgcccg
      361 ggcaaagcgg gatatgaggg tgctcggccg gacatagagt ctctgggcga gactggtgac
      421 ggtgggtgtg tcaggggcga cacgaatgag ggcttcgacg aagaggcgag catccggagg
      481 tgtatcggca agcgcgtcga ggatggggcc ctgaatccgg gcgacggcgc gcgtggccgg
      541 ctggccgacc acctggcgca ggcggctcca cccggtgggc gaggttacat ccacgacttg
      601 ccgaacaccc gaggcgccga ggcggagcag catctccgtg gcactgggat cgtgctgtga
      661 gacgagcgct accgtcggga tgccgggaaa ctcgcggacc agatgcccca gcgcctcgac
      721 ttgctccggg gcacaccggt gaaccgacac caggacggcg tcgaccgggc gctcccgcac
      781 gatccgtacg gcgtctggaa tcgagtcccg gtgcaccacc gcgaaacaac cgctgcccgc
      841 ggcatcgact cggggccgct cgacgggtaa cagaacagtt gccacagtgg gcgaacctgc
      901 ttcggagcca aagcgcacgg tgtcctcccg aaaggtcgtg cgggagggta cggcagcggc
      961 gtcaaaggag agtaaatccg aaacggtgcg aagcgaaacc tcgtcaggtt caaaaacgcg
     1021 gcggcgaccg ctgagtcagc caacgtttct acctacgaga gtatccaatc gaggctggag
     1081 gtagggtctc tgacgtgagt gataccacga tcgatctctt caccgcactc caggccgcgc
     1141 tgggttcaca gtaccgactc gagcgcgagc tcgggcgcgg tggtatgggg gttgtttttc
     1201 tcgccaccga tgccaccctc gaccgtcggg tggcgatcaa ggtggtccac cccgagctcg
     1261 cgctgcatga tgccattacc cgcaggttct tgacggaggc ccgcactatt gcgcgggtgc
     1321 gtcatcccaa catcgtcgca atacatgccg ccgggagcgc ggacggcctc ctgtactacg
     1381 tcatggacga ggtggccggc gagagcctgc gccagcggct cggtcgggag agtcacctca
     1441 gtacagagga gaccgcccgg atcgtgtcgg acgtcgcgtc tgccctcgat tgcgccggtc
     1501 gtgccggggt ggtgcaccgg gacgtgaagc cggaaaacgt cctgctcgat caggccaccg
     1561 ggcgcgcgct gctggcagac tttgggatcg cccgggccgt ggtcgcagat tccggcggct
     1621 cgagcacggg ccaaggggtg gcagtgggga cgccggtgta catgagcccc gagcaggcgg
     1681 ccggggagga gatcgatacc cgcagcgact tgtacgcgct cggtattgtc gcgtacgaga
     1741 tgctggtggg ccatccgccg ttccagggac cgcaccgggt agtcgtctca aaacacattg
     1801 cagaacgtcc ggttccgctc gagcggctgc ggccggacgc tcccggcgcg cttaccgggg
     1861 cgatcatgcg ggcgctcgag aagcagccct ccgaccgctg gcagaccggc gaggagttcc
     1921 gccaggcggt agccggggag cggccgacgc cacaccgcag gcgggtccct cagcggatcg
     1981 tcgccctggc cgcggtggtg ctggcggtgc tcgccgcgac cataggtctg gtgcgccgga
     2041 gcccgggacc accgcgcggg gtcaatcccc ggcattccat cctggtgctg ccgttcgaca
     2101 acttgcggga cgagcgctcg gtggaatggc tccgcgacgg cagcgtcagc atgttggggc
     2161 tgaacctatc ccagtggaac gatctcaccg tggtggacca cgaacggctg cacgacctgc
     2221 tcgccaagca taggctcaag gtgggcgacg acatcgggct cgatatggcc cgacggctgg
     2281 cccgcgaagc cggggtgtgg accgtcgtgc tgggggattt cacccccgcg ggagactccc
     2341 tgcatctcgt ggcgcgggtc ttcgatgtcg cgagcgggaa gcgagtggat gtcgcccgcg
     2401 ccgacgatcg tccgggcgcg gacgttcggc cgctgttcga ccagctcgcg gccaagctgc
     2461 tcaatctctc cggtgctccc aacgagatcc ggaccggact ggcccgctcc accacccagt
     2521 cgctcgaggc gttccgggcc tacctgagcg gcgtcgagca tctcaatcgg tgggacctgg
     2581 ccggggcgga acgggacctc gagcgggcgc tttccatcga cacgacgttc gggctggcct
     2641 actacaagct ggcgctcacc cgcggctggc tggtggggac ggaggactcg attgccgacc
     2701 gggccatcct gcgggcgacg gcctactcgg ggaatctccc ggcacatgag cgcacggtga
     2761 tcaacgcgta tcgcgcgttc atcggcggcg agtaccgcga ggcccgggcc ttgtataacc
     2821 agctcattgc ccgcgacgct ggcgatgcgg acgcctggta cgggctgggc gaagcctggt
     2881 tccacgacac cgccggggtc aatcaggcgc cggcctggac ttcggcgatg cgggcgttca
     2941 agcgtacgct ggcgctcgac cccaactacg ctctggcgta cgaccacgtg cacacgatgc
     3001 tgagtcaggc ggccgcgact tatccgctgt acgccctgct cccggcggac tcctttgcca
     3061 tcgcccgaag cgttaccgga cagccgctgg tcgacagcgc tacggtccgg tccgccgtgc
     3121 agcgggccca ggccgaggca ctggtgtcag cccgcacctg ggtcgcgagc cagccgacga
     3181 ccctccgggc ccacggggcc atggtgaacg cgtacgtctc ggccggtaac tacaagggtg
     3241 ccatgtcgga gctggagcga ttccgcgagg ccacgcctct gcaccccgag ctgcccttcg
     3301 tcgaggcacg ggttcgcttc gcctcgggcg acgtagaccg agccgcggct cagctccgca
     3361 ctgcgctgga tacggtggcg ccgggtgatt tccgcgccta tgacgggacg accaccgtgg
     3421 tcagcgatat cgccgccgcg gcaaacgttt tcgcctatca gggcgacctg accaacgcag
     3481 ccaaggcgct ggagctggcg gatcaggtgc gccgcgaagt cattcaccac cctgagtcgg
     3541 ggtccaaggg cgatggatgg cggcgaatcg cgctgggtga gctgtacgcg gctgcgggag
     3601 gcccggcgtc ggcgttgcgt cagatctggc agagcgccgc tgaggccgct cgcatggctc
     3661 ccacagaaca tcggaagcac atcgctcaca ccggggccac cgcggccatc ggcctcttca
     3721 ccgggctcga agcggacagc accgccctga aggaacttca ggctatctca ggtgacacca
     3781 atcccaaaga agtccgggcg ctcctcgccg tgagccgggg ggactcggcg gccgcgcgac
     3841 ggactctcgc cgagccggat tcgtccgggt acggcaagta catgtacatg gtctataccc
     3901 gccccttcgc cgcccaggcg tactatctcc tcggcgaata tgagaccacc ctccgcgtac
     3961 tcgaagggtt ccaggcctcg gccctccaga ccggcggctt cgactcccgc tggggcatgc
     4021 tgggccgggt tcggctgctc cggggtgcgg cctacgagcg gttgggccgg cgggccgagg
     4081 ccagagagca gtaccgtcag gtcctggctc agtggaagaa ggccgacccg gcgttgctgc
     4141 cgttcatcca gcaggcgcag cggggcttgg cccgggtggg gcatgctggg tgaactgcgt
     4201 aagcggtgag cggttagcag tgagcgggat ggcatgaccc gctgaccgct tacctcttac
     4261 cgctcacgca cttatattat ccagactggt caagcgcgat gatcgcgggc gccgcaagac
     4321 gcccgaggaa agtccgagct ccatcgggta gactgccagg taacgcctgg gcgccgcaag
     4381 gcgacggaca ggaccacaga aaagaaaccg cccggagacc cggcacaaat gccgggctga
     4441 agggtaaggg tgaaacggtg gggtaagagc ccaccgcgcc actggcaaca gtggcggcac
     4501 ggtaaccccc agtcggagca aggccaaata ggcggcgagg tgtgacccac accgatcagt
     4561 gaaaagccgc gggtaggctg ctagaggtgg ctggcgacgg ccatcccaga cagatgatca
     4621 tctccccttc gggggaaaca gaactcggct tacggctgac cagcggcggc cctccggact
     4681 caggttcggg gggctgttgg ttttgggtcg catagccggt tacctttttg ggcctcggac
     4741 ctccagatag gggacttaga tgctgttacc cgccaaccgc tacagcgctc ttgctgccgc
     4801 tgcactggtc cttccgctcc tgggcgatgc cccggcgacc accaaatacc ggatcgatca
     4861 aacactgtcc caggaaatcg acgccacgcc ggccggcggg gccaagcaga gaatcgcctt
     4921 cacgacttcc agcttcgtca ccgtgagtct ggccgatagc gccggcggca aggtcatccg
     4981 ggtcgtggtc gattcgctgc gcggcgacag cgccgtgccc atccctgccg cggtgctcga
     5041 cagcgcccgg ggagcggagt ttcacggatt cgtggcgaag tcggggaagc cgtccggact
     5101 gcaaccggtg ccggcgaacc cggccgcagt gcagatccag gggctgctca gcgacttctt
     5161 cccgtgggtc aaagctggac tgaaggtggg tgacagctgg tcagatacaa cggccaagac
     5221 cgatgggacc ggtcccgaca gcgtgactgt ccggcgggtg agcgcgtaca aggccgccgc
     5281 gtcagcgacc tggaatgccc gcaaggcggt gcgaatcacc gaggacttca cctcgtcgat
     5341 ggccgggacc caacccacgc cgaatggccc ggcacgcatc gaggggaccg ggagcggaaa
     5401 aggctcctac tacgtaagcc cggacggccg gtatctcggc ggcaattggg agcagcaatc
     5461 ttcgcttgcg atatccgggt cctttgccaa gcagccgcta cccatcagga tcgtgcagaa
     5521 gaccacggtg accgcgctca agtgatcggg ccaacggcgt gaggcccgct cagatcctgg
     5581 tcgccgtcgc gctggcagga tgtggatcgg ccacgtccac caccggcgga ccaagcgggc
     5641 cgacgcccca gccgggtgcc ccaaatcccg aggtgccggc gcccggtggt ggcgggatca
     5701 cctacggcgc ggtgcgcgat gccggatatg ctctcgagcg acacgacagc ctgacgattc
     5761 agctcccggg tggcgccagc cagcagcagc tgatcgaccg aaccgcgtat ctccgcgtcg
     5821 cgattgtgcc cgatacagcg gggtacgtgg ccaccatcgt tctcgattct attcaggctg
     5881 cggtcggcgg agtgcctgca gtaccggact cggtcatccc ggcccgcggc acgcggtgga
     5941 cagcatctct cacacctgag ggaaggcttt ccgcgctgaa ggccgaccga tccacgaccg
     6001 tgggggacca actcggaagc aaccttcgga gtctctttcc cagcctcccc agcggcgggg
     6061 tgaaggcagg catggagtgg accgacacgg ccgaggtccc catcagggcc gatgccttcg
     6121 acgcgaccga gcggtcgctc accagctacc gggcgaccga gagcgatgat ccccgggcca
     6181 agaaggcgat caagttggag agtacggggt cgtatcagag gaggggcaaa ggaacccagt
     6241 acgatcagca gctggagatg agcgcttcag gcacccgcac ggcggtccac tacatgaatc
     6301 ccgatgggac gatcgcttcg gcccgcggct cagacgccgg cgacctcacc atcacgatcc
     6361 ccgcagtcgg ccaaaccgta ccggtgaagc aggccgggac cttctcaatc actttgctgc
     6421 ggccctccaa gcgctgacgc cggcgcgtca gcagcggttc atcagaagat gtcgttcgga
     6481 tcgcggccga gctcctggac gctcctgacg gggttctccg ccggctcggg cgcaccggtc
     6541 tggcgaaagt gctcgatccg gtcgacagcc ccgaccttga tccggctgag cgtgccgccc
     6601 agacgcttgc gggtggcggg tccgctctcg ggtgtgagca gcgcggtgag gccggcaccg
     6661 accaggaacc ccgccaaggc gatgatccgc tttccccggc gggcgtggtg ctcttgtttc
     6721 cgagctcgag atcctgtctc tggcgccagc agcagcgcgg caccggctcc cacggcggca
     6781 gccagcaccg cgagcgccac gaaaccaccc cgttcctcgg gtggcatggg ttcggtcgat
     6841 ttcagggcat ctggattcgg catcgggatt ctcctgtcag tcgcgactcg cgacttctaa
     6901 tctaccagcc gtagcggcat caccagggcg aggtagctgg ccgggtcatc ccagcccacc
     6961 ggctcacagg tggccgcacg ctcgggtgcc ttgaacgtca tccgcacctc gtcggttggg
     7021 atgtacttca ggatctcgag caggtaggcg gcgttgaatc cgatctcgag cggatcgccc
     7081 tcgtagctga cgttgagctc ttcctgcgcc tcgccgaggt cgggggtctg aaccgacagc
     7141 ttgcaggagc cgttcgcgaa ggccatccgg atccggtggg tctgatcgct ggcgacgatg
     7201 ctcattcggc ggagcgcggc ggtgagggcg gccttgtcgg cggtggcggc cttgtcgttc
     7261 tcccgcggga tgacctgttc gtaattcggg tatggtccct cgatcagccg ggtgaagatc
     7321 tgggtcgtgc tggtgcggaa gcccagatgg ttttcgcttc gcgcgatctc cacggtctca
     7381 tccgtgtcga agagccgccg gatctggtcc agggccttgg gtgggacgat caaatcggcc
     7441 tgcgaggctc cctgggtctc cgaggtgggc acgtccatcc gcgcgagccg gtgtccgttg
     7501 gtcgcgacca tgcgcatccg ctccggccgg agctcccaca agacgccgtt gaggatgggc
     7561 cggctctcct cggtgctggc ggcaaaggcg acgtgcccga tgagcttctg gagctctttg
     7621 gaggaggtcc tccagccacc ttcgaacttg acggtgggga acgccggaaa ctcttcccga
     7681 gggagaccga gcagcttgaa cctggaccgg ccacactcga tggtgacccg ctgctcaccc
     7741 gaggccgtca gccggatggc ggcgctgggc aactcgcgca cgatctcgac cagcttgcgc
     7801 gcgggaagcg tgatggcgcc ttcctcatcg accgaggcac tcaccgtggt gctgacggcg
     7861 atgtcgagat cggttcccga gagacggatg ccgtctttcg tggcctcgag caggatgttc
     7921 gagaggatcg gcagcgtcgt cttggcgggg atactggccg cgaccgccac gagaccttcc
     7981 tggagctgct ctcgtgtaat tgtgagcttc ataccgattc tcggagcgct atcatcagag
     8041 actactcttc catttaaata atgtagtagc agcagtagag ggtctggaaa tgttgagcgg
     8101 cgctccaact gaatccgctc atgcgcactt acgcgcttga acctctgtcg acagcgtgtg
     8161 tgccatgggg acggcgcccc tcaattgctc ccactgtcca ccgctatcca gagttcccac
     8221 atcccgcggc gtgcacgggg attattctgc gcacaactcc tggcgcgcat gctcgacccg
     8281 ctcgcggaac ccacgatcgc gcgacatctg ccggctcact ttatccacgc tgtgaatcac
     8341 ggtcgagtga tcgcgcccgc cgaatgcctg accgatctcg accagctgca tctccagcag
     8401 ctcgcgggca agatacatcg cgatctggcg gggcaccgtg agtgtcttga tccgcgcctt
     8461 cgagcggaga ccctcgggtg tgacccccca ccgcctggcc acgacctcct gaaccttgtt
     8521 gatcgaggga agcgccttgg gcgccgccag tccatcctca ccggggcgaa tcttgtcgga
     8581 gagggcttcc cgggccaact cgatcgagac ctccttgtgc ttcaaggagg cgaacagcaa
     8641 caacttaatg atacaaccct cgagctcacg cacgttcgac cgcacatgct cggcgataaa
     8701 ccggagcacg tcgtcgggaa tggtgagctc caggtgatcc tgctcctgct tcttgcggag
     8761 gatggcaatc cggtgctcca ggtcgggctg cccgatatcg gcgaccatgc cccactcgaa
     8821 ccggctgacc aggcgtgcct ccagcccggg cagctccttg ggaggccggt ccgaggtgag
     8881 gacgatctgc ttgttcccct cgtagagcgc gttgaaggtg tgaaagaact cttcctgggt
     8941 catctccttg ccttcgagga aatgcacgtc gtccaccagg aacagatcta cgtccgaccg
     9001 atagcgccgg cggaactccg gcatggtccg gctgtggatg ctctcgatca cctcgttgat
     9061 gaactgctcg gccccgacgt agagcacccg agtgtcgggg tgccgctcga ccacggtatg
     9121 ggcgattgcc tgcatcaagt gggtcttgcc cagcccggtg gcaccgtaga tgaagagcgg
     9181 attgtaggtc ttgccgggtg actcggctgc ggcatgggcg gcggcggcgg cgagctcgtt
     9241 ggacttgccg atgacgaacg tgtcgaacgt gtaccgctcg ttgagcggct gggtgctcgg
     9301 gttgatctgc acccctgcga ccgcgggcgc ggacggggcc acgaagaagt ccatctgcgg
     9361 gcgcttctgg cgatcctcgt tgacccggaa cacgatcgag gtgggctggc cgagcaccgg
     9421 ctcggctaac cgcgagagga gcgtcgcatg cttcgtctcg ttccactcga ccgcgaactg
     9481 atccggcgcg ccgatgatga gacgaccttc atcgagagcg atagcctcgg tcggctcgag
     9541 ccacgttcgg atcgtgtggt cggggagttc gcgatgcgcc tcatcgagaa tgcgcttcca
     9601 agcgtcttta gcggacagct gcatcggtac tcgaaaacgg aagggatttt ttcaagggcg
     9661 agagatgtta cgggcggggt gttgaaaagt caatcggggc ttgacaagga gaaaatgacg
     9721 gagaggacgg agaaggcgga gaactgatcg cgccaggaat cccttctcgc ctttttcgcg
     9781 ggtcatcccg ctcgttcctc ggatttttcc cctcccgtcc tctccgcctt ctccgtcctc
     9841 tccgcccttt gccctcaact tgaccccgtc cctctcctcc ggctaacttc cccggctcac
     9901 tttggaggat tcctcggatg aagccgtcgt atcggccacg gaacaagcgc cggatcaaca
     9961 agcacggatt ccgcgctcgg atggccacgc gctggggccg agccgttctc tcgcgccgcc
    10021 ggaaaaaggg gcgcaagcgg ctcaccgtgt cgctgccgtc gaagcacgga ggctcctgac
    10081 gacttcggcg cgcctgccgc gggctcatcg gctcgcgcgc gcgtccgaca tccgccgctg
    10141 cctgacccat ggccggcgcc gccgctccga gcacctggat atagtctgga tggacaacca
    10201 aacgggccaa ccacggatgg gactgatcgt ccccaagttc cagtcgtccg cggtggcccg
    10261 caatcgtctg cggcgtcggt tgcgcgagat ctggcggcag gagatccagc agcggcagcc
    10321 ggcctgggat ctcgtcattc gcgcccggcg ggaagcgtac gcggccgact tcgatgccct
    10381 gcggacccag cttcgtgtgt ggcgcgaggc cgttctgggc accgggtgaa tcgccgtgca
    10441 gaagatctgg cttctaccac ggcacctgct ggccggactc gtccggggtt atcagctcgt
    10501 catatcgccg ttgctgccgc cgagctgtcg cttcatgcca tcctgctctc aatacgcgct
    10561 cgaggcgatc acgcggcacg gggcagtcag aggtacctgg ctggccgtgc ggcgcctggt
    10621 gcgctgtcat ccgtttcatc cgggcgggtt cgaccccgtc ccttgaccta gtgacctgag
    10681 tccatggacc gccgtaccat ctgggcgatt ctgctgatga tggccatcgc aatcgctcca
    10741 gcgattttta tgaagaaacc gcggggaagc gcggaagcgg ggaagcgggg aagtgagacc
    10801 gccgtcccag cggacagctc tgctgcccgc gccctggtga ggcaggacag cgtttctcct
    10861 cgtgtgccga ctcgagacac taccgaggca gtggcttccc cgcctcgcgc cgaaggcgca
    10921 accgacgaca ccgtccgagt gacctcaccc ctctacacct acggtatcag cactcggggc
    10981 ggccgcctgg tcgaggcaac cctgccgcgc tatcgctcga tgacgccggc ggagcggggt
    11041 c
//
LOCUS       DASYRV010000266         5064 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3791893, whole genome shotgun sequence.
ACCESSION   DASYRV010000266 DASYRV010000000
VERSION     DASYRV010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5064
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3791893"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            267..773
                     /locus_tag="VGQ24_06920"
     CDS             267..773
                     /locus_tag="VGQ24_06920"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEV8454604.1"
                     /translation="MEAQDLRALQAPLKQQYKNDPARAIVTLQASGRLDGAGVSCRVE
                     TGRAIVEAGLHPATGGTGLQACSGDMLLEALAACAGVTLRAVATSLDIPVRGGTVYVE
                     GDLDFRGTLGVSKEVSVGFQRIRLSFELDTDASAEQLDTLLKLTERYCVVLQTLRSPP
                     TTTASMSS"
     gene            complement(851..2803)
                     /locus_tag="VGQ24_06925"
     CDS             complement(851..2803)
                     /locus_tag="VGQ24_06925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEV8454605.1"
                     /translation="MTQLSLSGVAVEFGATRLFANVTFTVGKGEKWGIVGRNGTGKTT
                     LFRLITGEAQPSRGTVARVSGLRFSVMEQHREFAGAATVWEAAAGPFAELLELERSLA
                     QQGVALAEAGDRCTPAMLAKYDRDLERFEREGGYTLAPRIDAVLHGLGFDPDRARTQA
                     LAGLSGGERGRVGLAQQLVAPADVLLLDEPTNHLDLETTRWLEDYLSGLDATVLLISH
                     DRAFLQAVADHVLHLEAGTTEAYTGDYEAFVRQRAERRLSQQRAFEKQSRVLASEEDF
                     IRRNIAGQKSAQAKGRRRRLARISRLSAPPGEAGTMAIRLEADSRGGDQVLVAENVRV
                     AVEDRLLLDRFSTRVRRGEVIGFIGPNGAGKTTLLRVFVGERSPDAGEVRIPESVRVA
                     HYRQDLAQVPPDRSLYELINDLRPSWGRGAIQGHLGRFGFSGDSVLRQTGTLSGGERA
                     RVALAMIMLSGANLLLFDEPTNHLDVESIEALEDALEVYDGTVILVSHDRALLRALTS
                     RVWVLHQGRVTDFSGGFDEWETVSTERAHAAAVAALEEEGLRRVHERKQTRRTEDGRK
                     RTQTARRTAQRTVEEAEARVTTCEARVAALRAQLEDPALYSMPAGPAQAHSLGVELET
                     ARVELDRALRDWEAAGEGQGPGGLSP"
     gene            complement(2800..3147)
                     /locus_tag="VGQ24_06930"
     CDS             complement(2800..3147)
                     /locus_tag="VGQ24_06930"
                     /inference="COORDINATES: protein motif:HMM:NF015893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC/Spx/MgsR family protein"
                     /protein_id="HEV8454606.1"
                     /translation="MEVQIFGIKNSAETRKALRFFAERRVKTHFVDLQERPASPGELN
                     RFAQKFGGEALVDRQSRRFADLGLGAARLSDDRWVEKLALEPLLLRMPLVRYGQQLTV
                     GDASETWRGWTGR"
     gene            complement(3263..4057)
                     /locus_tag="VGQ24_06935"
     CDS             complement(3263..4057)
                     /locus_tag="VGQ24_06935"
                     /inference="COORDINATES: protein motif:HMM:NF015438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC N-terminal beta barrel domain-containing
                     protein"
                     /protein_id="HEV8454607.1"
                     /translation="MTLRLTGLTIYPIKSARGIPLEESEVDEFGLRHDRRWMVVNPSG
                     EFLSQRTHPQLALIAPEIDGAKLRITAPEMPPLELPLRPKDTVRSRVAVWGEICPASW
                     LGENAAGWFSEFLDCACSLVHMSDSVIRPADPVFAPPGTRVSFADGFPFLLTSEESLA
                     DLNRRLAHPLPMNRFRPNLVVAGAEPYAEDGWRRIEIGGVPMRVVKPCGRCVVTTTDQ
                     ATGERGKEPLRTLATYRNRAGEVMFGQNVLHERPGRLRVGDPVVVR"
     gene            complement(4131..4787)
                     /locus_tag="VGQ24_06940"
     CDS             complement(4131..4787)
                     /locus_tag="VGQ24_06940"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HEV8454608.1"
                     /translation="MLGLFWPETDESHARLALRQVIHVLRRELGPDVLLTPGTMLGLA
                     PHCLWCDAAAFVAALGAGHQLLALELYRGDFLPGMFLTGASEFDRWLWQERSRLQTRA
                     SAAAWAVSEEMESVGAGSHAAFWARRAVELAPYDEQGVRRLITLLERVGDCAGALRVY
                     EDFSRLLAIELEITPSPGTTALADAIRARSQRVASTHGAQWVGIAWLLTRVPNLLALA
                     "
BASE COUNT          859 a         1745 c         1647 g          813 t
ORIGIN      
        1 cggtttcgcc aacgaatcgg gcttcgggat gctcgccggc ctcggctatg acgtccgggt
       61 gggtcgtaac ctgtccctga ctccggtcgc gaactggttc cgcggttcct tcagcggggc
      121 gtcggccaac gtgctacagc tcggactggg cgttacctcg cactaaggca gccgaaccac
      181 acgaacattg cgacgggagc ggcccaaccg ctcccgttcg catttatatc cgagtacgct
      241 tcggtcaact cggaccggac ccgccgatgg aagcccagga tctccgcgcc ctccaggcac
      301 ctctcaagca gcagtacaag aacgaccccg ctcgcgcgat cgtcacgctt caagcttccg
      361 gtcgcctgga cggagccggg gtgagctgca gggtggagac cgggcgggcc atcgtggaag
      421 ccgggctgca cccagccaca gggggaaccg gcctccaggc ctgctccggc gacatgctgc
      481 tcgaggcact cgccgcctgc gccggcgtga cgctcagagc cgtcgccacc tcgctcgata
      541 tcccggttcg cggcggcacg gtgtatgtcg aaggcgacct cgacttccgc ggaacgctgg
      601 gcgtgagtaa ggaggtgtcc gtgggctttc agaggatccg gctcagcttc gagctcgaca
      661 ccgacgcgtc cgccgagcag ctcgacactc tcctcaagct gaccgagcgc tactgcgtcg
      721 tgcttcagac cctgcgttcg ccaccgacta ctacggcttc aatgtcatcc tgagcgaagc
      781 gaaggagccg aaacaacata ctcgccgaaa agttggcagt gtcgaacggg tccggcgccc
      841 tcgctgtcgc tcagggtgac aatcccccag gcccttgtcc ctcacctgca gcttcccaat
      901 cccgcaaggc gcgatcgagc tcgacccggg cggtttccag ctcaacccca agcgagtgtg
      961 cctgggccgg gccggctggc atcgagtaga gcgcgggatc ttcgagctgg gctcgcaggg
     1021 cggcgacccg cgcctcgcac gttgtgaccc gagcctcggc ttcttccacc gtccgctggg
     1081 cggtccggcg cgccgtctgg gtgcgcttcc ggccgtcctc ggtccggcgg gtctgcttac
     1141 gctcgtgcac ccggcgaagg ccctcttctt ctaacgccgc cacggcggca gcgtgggcgc
     1201 gttccgtact gaccgtttcc cactcatcga agcccccaga gaagtcggtg acgcggccct
     1261 ggtgcagcac ccacacgcgg ctggtcaggg ctcggagcag cgcccggtcg tgactgacca
     1321 ggatgacggt cccgtcgtat acctcgaggg cgtcttccag cgcctcgatg gactccacgt
     1381 cgagatgatt ggtgggctcg tcgaagagca gcagattggc gccggacagc atgatcatgg
     1441 ccaacgccac ccgggcgcgc tcaccgccgg aaagggttcc ggtctgtcgc agcaccgagt
     1501 cgcccgagaa accgaagcgg ccgagatgtc cctggatggc accccggccc caactgggcc
     1561 tcaggtcatt gatgagctcg tagagcgagc gatccggggg cacctgtgcc agatcctgcc
     1621 tatagtgggc gacccggacc gactcaggga tccgtacctc tcccgcgtcc ggcgaacgtt
     1681 ctcccacgaa gacgcggagc agggttgtct tgcccgcccc gttcggaccg atgaagccga
     1741 tgacctcacc ccggcggacc cgagtggaga aacggtccag gagtagccgg tcttccactg
     1801 cgacccgcac gttctccgcc acaagcacct ggtcgccgcc gcgcgagtcc gcctccagtc
     1861 gaatggccat cgtgcccgct tcgcccggtg gcgcgctcaa ccggctgatt cgggccagcc
     1921 ggcgccgtcg gcccttcgcc tgcgcgctct tctgccccgc gatgttgcgc cggatgaagt
     1981 cctcctccga ggccagcacc cgagactgct tctcgaaggc gcgctgctgg ctcaggcggc
     2041 gctccgcccg ttggcggaca aatgcctcgt aatcgccggt gtaggcctcg gtggtccccg
     2101 cctccagatg cagcacgtga tcggccaccg cctggagaaa ggcacggtcg tgactgatga
     2161 ggagcaccgt ggcatcgagc ccggacaggt agtcttccag ccagcgggtg gtctcgaggt
     2221 ccaggtggtt ggtgggctcg tcgagcagca gcacgtcggc cggagcgacc agctgctggg
     2281 ccaggcctac cctgccccgc tctccgccgc tgaggcccgc caatgcctgg gtcctggccc
     2341 ggtcgggatc gaagccgagt ccatgaagca ccgcatcgat gcgaggagcg agggtgtagc
     2401 ctccttcccg ctcgaagcgc tccaggtcgc ggtcgtactt cgccagcatc gccggcgtgc
     2461 agcgatcgcc cgcctcggct agcgcaacgc cctgctgggc tagcgaccgc tcgagctcga
     2521 gcagctcggc gaacggcccg gcggcggcct cccacaccgt cgcagcgccg gcaaattccc
     2581 ggtgctgctc catcaccgaa aaccgcagac ccgacacccg agccaccgtg ccgcggctcg
     2641 gctgagcctc cccggtgatc agtcggaaca gcgtagtctt gccggtgccg ttccggccca
     2701 caatgcccca cttctctccc ttcccgacgg tgaaggtcac gttcgcgaag agccgcgtgg
     2761 ccccgaactc caccgcgacc ccggacagtg agagttgggt catcgcccgg tccagccgcg
     2821 ccacgtctcg gaggcatcgc ccaccgtcag ctgctggccg tagcgcacca gcggcatacg
     2881 caggagcaaa ggctccagcg cgagcttctc cacccagcgg tcgtcgctga gccgtgccgc
     2941 gcccaggccg aggtcagcga accgccgtga ctgacgatcc accagcgcct caccgccgaa
     3001 tttctgggcg aagcggttga gctcgccggg tgatgcgggc cgctcctgga gatcgacgaa
     3061 gtgggtcttt acccgccgtt cggcgaagaa gcgcagggcc tttcgggtct cggcgctgtt
     3121 cttgattccg aagatttgga cttccatggg cggggaattt acacgcgacg ggtaagacgc
     3181 gagacgtcaa cgacagttgt caccctgagc gcagcgaggg ggccataacc gggctgggtt
     3241 gtcgaacggt ggccttccgc tcctaccgaa ccaccaccgg atcgccgacc cggagccggc
     3301 caggtcgttc gtgcaggacg ttctgcccga acatcacctc gcctgcccga ttccgatacg
     3361 tcgccaaggt gcgaagcggc tccttgccgc gctctccggt ggcttgatcg gtagtggtga
     3421 ccacgcagcg gccgcacggc ttcaccaccc gcatcgggac gccgccgatc tcgatgcggc
     3481 gccatccgtc ctctgcgtac ggctcggcac cagccacgac caggttgggg cggaaccggt
     3541 tcatcggcaa cgggtgagcc aaacgccggt tgagatcggc cagcgattct tccgaggtca
     3601 ggagaaaggg aaatccgtcg gcaaaactga ccctggttcc cggcggggcg aacaccgggt
     3661 cggccggccg gatcaccgaa tcggacatgt ggaccagact gcaggcgcag tcgaggaatt
     3721 cggaaaacca gccggcggcg ttctcgccca gccagctggc ggggcaaatt tcgccccaga
     3781 cggcgaccct gcttctgacc gtatccttgg ggcggagcgg aagctccagc ggaggcatct
     3841 ctggcgccgt gatccggagc ttcgcaccgt cgatttccgg ggcgatcagg gccagttgtg
     3901 gatgagtgcg ttgggagagg aattcacccg aggggttcac caccatccag cgccggtcat
     3961 ggcgcagacc gaactcgtcg acctccgact cctccagcgg gatgccgcgt gccgacttga
     4021 tcggatagat ggtgagtccg gtgagtcgca gggtcacgat ccaggttcgg ccgttgcata
     4081 gcggtagtca tcgcacgacg cgtgcttgat ggccgaagct gtacgggatc ctaggccagg
     4141 gcaagcaggt tcggcacccg ggtcagcagc caagcgattc cgacccactg tgctccatgc
     4201 gtgctagcga cgcgttggct gcgggcccga atggcgtccg ccagggccgt ggtaccgggc
     4261 gaaggcgtga tctccaattc aatggcgagc aggcgggaga agtcctcata aacgcgcagg
     4321 gcgccggcgc aatctccaac ccgttccagc agagtgatga gccggcgcac tccctgttcg
     4381 tcgtacgggg cgagctccac cgcccggcgc gcccagaacg ccgcatgact tcccgccccc
     4441 accgactcca tttcctcgct caccgcccag gccgcggcgc tcgcccgcgt ctgcagccgt
     4501 gagcgctcct gccacagcca acggtcgaac tccgaggcgc ccgtgaggaa catcccgggc
     4561 agaaaatcac cgcggtatag ctcgagcgcc agaagctgat gcccagcacc cagggccgcg
     4621 acaaaggcgg ccgcgtcgca ccagaggcaa tgaggggcga ggccgagcat ggtccccgga
     4681 gtcaggagta cgtcgggtcc aagctcccgc cggagtacgt ggatcacctg gcggagcgcc
     4741 aagcgggcgt gggactcgtc ggtttcaggc cagaagagac cgagcaacgt gtctcggggg
     4801 acaaggcgag acgggcccga aacggcgagg tacgcgagaa ttgccaggca cttcggtctg
     4861 gcaaggagcc ttgagcactc ccggccgtcg gcggtgcgaa gaccaaatgt gcccagggtc
     4921 cagagctcaa tcatggtgcg ggcgggcggg ccatctctgc gtccttctaa cagcctaacg
     4981 gcttcctggg gcgccgtccg ggaggggtcc aagcaaaggt aagtaggaac ctgcatcggt
     5041 ccacttaccg ctgccgtgat ttca
//
LOCUS       DASYRV010000267         1663 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1347408, whole genome shotgun sequence.
ACCESSION   DASYRV010000267 DASYRV010000000
VERSION     DASYRV010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1663
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1347408"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(210..1418)
                     /gene="alr"
                     /locus_tag="VGQ24_06945"
     CDS             complement(210..1418)
                     /gene="alr"
                     /locus_tag="VGQ24_06945"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEV8454609.1"
                     /translation="MTISRRDMLAATGLAIAGAGVRPHAPLSGTAKLGTQSLDPWLEI
                     DPAALGHNVRTVSQLAGGRPILAVVKNNAYGLGLGIAGPLLDALTAVWGFGVVRPEEA
                     RALRGAGVRKPIVLMGPAAEQEVEELVRQEVRLAPYRSADSERLIQLAARLKRPVRVH
                     LYVDTGMHRMGLPYEQVLPWLESAALRRAISIEGAFTELVEDQEFDREQATRLTQLAE
                     SARSGGVSLGKLHAASSDAVVKPTAETFLDLIRPGLALYGGYPTPESRARGELRPAYR
                     LKARVIRVDLLQSGDGVSYHRRYLADRPTWTATLGIGHVDGYPAGAVKGCEVLIRDRL
                     YPVVGTVSASHTVVALGEQAAVQVGDEATLVGSERPGLHPNAVAEKSGWSEYNMFMHL
                     NPGLARRVVS"
     gene            1481..>1663
                     /locus_tag="VGQ24_06950"
     CDS             1481..>1663
                     /locus_tag="VGQ24_06950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454610.1"
                     /translation="MRFVTSAEMQVEPSPWGPHEWLCRPGLTEAEGLLLVRVRMPVGR
                     AHQFHRHPALEEIIYVI"
BASE COUNT          292 a          553 c          541 g          277 t
ORIGIN      
        1 atcgcgacgg tggagttgct tgcggtcgct accgcctccg caagctgcga cgagagtgcg
       61 ctgagcgtac tggtggaatg ggatgaggag gagtgcgctg acgccatgag atttctcggt
      121 gaatgcagtt cgcatccact ctagctgttc ctcggcggcg gcaccatcgg ataaatgggg
      181 gatacgggag gggtgcagga atcaacgcct cagctgacca cccgccgagc gagccctgga
      241 ttcaggtgca tgaacatgtt gtactccgac caaccgctct tctctgctac ggcgttggga
      301 tggagcccgg ggcgctcgga tcccacgagg gtcgcctcgt cccccacctg caccgcggct
      361 tgctcgccca gggccaccac ggtgtggctg gcgctgacgg ttccgaccac gggatagagg
      421 cggtccctga tcaggacttc gcaacccttc accgcaccag cgggatagcc atccacgtga
      481 ccgatgccga gcgtagcggt ccaggtcggg cggtccgcca gatagcggcg atgataactc
      541 acgccgtcgc cggactggag caggtcgacg cggatcacgc gagccttgag ccggtatgcc
      601 ggccgcagct cgccgcgcgc cctggactcc ggggtgggat agcctccgta aagcgcgagt
      661 cccggccgga tcagatcgag gaaggtctcc gccgtcggct tcactacggc atcagacgat
      721 gccgcgtgga gcttcccgag cgacactccg cccgaacgag cggactcagc gagctgcgtc
      781 aaacgcgtcg cttgctcccg gtcgaattcc tgatcctcca ccagctcggt gaacgcgccc
      841 tcgatcgaga tggcccggcg caaggctgcg gattcgagcc agggcaacac ctgctcgtac
      901 ggcagcccca ttcggtgcat tccggtatcg acatagaggt gcacgcgcac cggacgcttg
      961 agtcgcgccg ccagctggat gagccgttcg gaatcggcac ttcggtacgg agccagccgg
     1021 acctcctgcc ggaccaactc ctccacctcc tgctccgcgg cgggacccat caagacgatg
     1081 ggcttccgca caccggctcc tcgcagagcg cgcgcttcct ccgggcgaac gacgccgaat
     1141 ccccacaccg ccgtcagcgc atccagcagg gggcccgcaa tcccgagccc gagaccgtag
     1201 gcgttgttct tgacgactgc cagaatgggg cggccccccg cgagctgaga gaccgttcgc
     1261 acgttgtgcc cgagtgccgc gggatcgatc tcgagccagg gatcgagact ctgcgtcccc
     1321 agctttgccg tcccggatag cggagcgtgc ggtctcacgc cagctccggc aatggcaagg
     1381 ccggtggcag cgagcatgtc gcgacgagag atggtcatcc tctatatata ggatataatc
     1441 cagtggaagt cctcctggaa accaaaaagg gtggcccgct ttgcgtttcg tgacttcggc
     1501 ggagatgcag gtcgagccct cgccctgggg gccgcacgaa tggctctgcc ggcccgggct
     1561 cacggaggcc gagggactct tgctcgtccg ggtccggatg ccggtcgggc gggcgcatca
     1621 gttccaccga cacccggcgc tcgaggaaat catctacgtg atc
//
LOCUS       DASYRV010000268         4611 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_939347, whole genome shotgun sequence.
ACCESSION   DASYRV010000268 DASYRV010000000
VERSION     DASYRV010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4611
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_939347"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..290
                     /locus_tag="VGQ24_06955"
     CDS             <1..290
                     /locus_tag="VGQ24_06955"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEV8454611.1"
                     /translation="KGDPKAVENGGKLFSAFNCDGCHAGGAVGFVGPSLADGRWRYGG
                     TDGEIYYSIFYGRPRGMPAWGGTLPADAIWTIVSYLQSLQPAKDTLSTTSW"
     gene            complement(503..676)
                     /locus_tag="VGQ24_06960"
     CDS             complement(503..676)
                     /locus_tag="VGQ24_06960"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEV8454612.1"
                     /translation="MGGGPVHPYDVIVLGLGGMGSATLFHLARRGLRVLGLERFDLVH
                     EYGSSHGLTRIKV"
     gene            complement(710..1825)
                     /locus_tag="VGQ24_06965"
     CDS             complement(710..1825)
                     /locus_tag="VGQ24_06965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454613.1"
                     /translation="MLRPLSIAATGTGVVVLLVVACSGSFEPTTGFFPTPGQAPPSDG
                     PTLTPQVSGTTERFFSVSPVNDRVVWASAAGGTFALTTDGGDTWISRVVPGAEGLEFR
                     DVQGITEKIAYLLSAGEGSDNRIYKTRDGGATWSLQFQAGPDPRNFYDCFDFWSPDRG
                     ITFADGQDSRFPVIRTKNGKTWQDIGDLLPAAEPGEAGFAASGTCVTTQAGNRAWIGI
                     GGPHARILSTTDGGNSWSSHDVPGITQGTATSGVVSVDFRDRFHGILGGGDVVASTVP
                     QDNVARSADGGATWTLATSTPFPGAVYGLSYVPGQLRLTAVATGPGGAAWTPDEGDTW
                     SLLPGITNCWSVGFASRKAGWLVCGDGGIVKVSFAGN"
     gene            1974..2840
                     /locus_tag="VGQ24_06970"
     CDS             1974..2840
                     /locus_tag="VGQ24_06970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454614.1"
                     /translation="MRRAHWATMASAMAGSLLILGMSACGDSTNPSGGTVLSVTETND
                     IADAAADEVDQAAGSITSEGTAFNAPPGGGCATVNNTTDTDADGAPDNATFTFALPAC
                     SFTGFRGGTLEITGTINISDPTPNDADFNYLATLTDFQFKLISPIASRTFTATRNGTR
                     ALSGNAAGVSLSNNIVLVRSVPNRADATISHNLLLDFTPAAGAVLALGQPLPNGTFTQ
                     SGTFTWSRADVSRTFTVTTVDPLVWDASCITDRKIVSGEIHATLAEGGYIRTVWTGCG
                     EEPTRSFVRATS"
     gene            complement(3381..3962)
                     /locus_tag="VGQ24_06975"
     CDS             complement(3381..3962)
                     /locus_tag="VGQ24_06975"
                     /inference="COORDINATES: protein motif:HMM:NF018213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative glycolipid-binding domain-containing
                     protein"
                     /protein_id="HEV8454615.1"
                     /translation="MPILGVGRPILWRRLDVPGHDAASLREADGGAELRGMAVFHGEG
                     GPTALHYRVRCDTEWRTTEATVDGWCGARTVELRVRRDHTGSWTLNGVPCPAVAGCID
                     LDLSFTPATNLLPLRRLDLAVDQAAEVRSAWLEWPAAVLTPLIQRYARRSVSEYDYEA
                     DLPGTAKFVGVLRVEPGGWVLDYAALWQAEAAV"
     gene            complement(4023..4517)
                     /locus_tag="VGQ24_06980"
     CDS             complement(4023..4517)
                     /locus_tag="VGQ24_06980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454616.1"
                     /translation="MHRLARAASILVVLGLARAQPGHSQTLSLAAASGPVFLPGSGAS
                     ADWQGLLGLGYQKGNVGGRLEAMFTGVPGADLLALTANLVWTFRRRQVTAVEPYLIAG
                     LGTYVKFSEHRFGLNGGAGVRRRAGPLRLFAEVRYHRVTRHFDEASKADTFVPVSFGI
                     TLGR"
BASE COUNT          857 a         1557 c         1459 g          738 t
ORIGIN      
        1 ccaagggcga tccgaaggca gtggagaacg gcggcaagct cttctcggca ttcaactgcg
       61 atggatgcca cgcgggggga gcagtgggct tcgtgggacc cagcctggcc gacggccgct
      121 ggcggtacgg cgggaccgat ggtgagatct attactcgat cttctacggt cggccgcgag
      181 gcatgccggc gtggggggga acccttccag ccgatgccat ctggaccata gtgagctact
      241 tgcagtcgct gcagccggcg aaggatacgt tgtcgacgac gtcgtggtga gcccggccct
      301 catgggctgg tgagcccggc cctcatgggc cggggagtca ggagtcggga gtcgggagta
      361 aggagtcggg agtcaggagt cgagagtgat gtcaccctga gcgcagcgag ggggccagac
      421 ctcaggtttt tgacgaactt tcgaattccg gctccttcgc tgcgctcagg atgacaactt
      481 tcctgcacct agaccctaga ccctagacct ttatgcgggt gagtccgtga gaggaaccgt
      541 actcatggac caggtcgaag cgctcgagtc cgagcacgcg aaggccccgg cgggcgaggt
      601 ggaagagcgt ggcgctcccc atgccaccga ggccgagcac gatcacgtcg taagggtgga
      661 cgggacctcc tcccatctga ggctggatgc agcctgcgac ccgtcgcggt cagttgccgg
      721 cgaagctgac ctttacaatc cccccgtcgc cgcacaccag ccagcccgcc ttgcggctgg
      781 cgaacccgac cgaccagcaa ttggtgatgc caggaagcag ggaccaggtg tcgccttcgt
      841 cgggtgtcca ggccgcgccg cccggcccgg tggcgacggc ggtgagcctg agctgccccg
      901 gcacgtagct cagaccatag acggccccgg ggaaaggcgt tgacgttgcg agggtccagg
      961 tggcgccacc gtccgccgaa cgcgccacgt tgtcctgagg tacggtgctc gcgaccacgt
     1021 cgccaccgcc gagtatgcca tggaagcggt cacggaaatc cacgctgacg acacccgagg
     1081 tcgccgtccc ctgcgtgatt cccggcacgt cgtgggagct ccaggagttg cctccatccg
     1141 tggtggagag gatcctcgca tgggggccgc cgattccaat ccaggctctg ttcccggcct
     1201 gggtggtgac gcaggtgcca ctggccgcaa acccggcctc acccggctca gccgcgggca
     1261 gcagatcacc gatgtcttgc caggtcttgc cgttcttggt cctgatcacc gggaaacggc
     1321 tgtcctggcc gtcggcgaag gtgatgcccc ggtcggggct ccagaagtcg aagcaatcgt
     1381 agaagtttcg gggatcgggc cccgcctgga actgcaggct ccaggtggcg cccccgtccc
     1441 tcgtcttata gatgcggttg tccgacccct cacccgccga cagcagatag gcaatctttt
     1501 cggtgatccc ctgcacgtct cggaactcga gcccttccgc gccgggcact acccgggata
     1561 tccaggtgtc tccgccatcc gtcgttaacg cgaacgtccc gccggcggcg ctggcccaga
     1621 ccacccggtc gttgaccgga ctgaccgaaa agaatctctc ggtggtgccg cttacctgcg
     1681 gcgtcagggt tggcccgtcg ctcggcgggg cttgcccagg ggtcgggaag aagccggtcg
     1741 tgggctcgaa gctgccggag caggcgacca cgaggaggac gaccacaccg gttccggtgg
     1801 cggcaatcga gagcgggcga agcatggggg ttctccgaag gggggtatcg gggtttcgtc
     1861 agacttaccg cgcaccgtgg gcccccgcaa ggtgatgacg attatggcac tgaggtggcc
     1921 gaggtcccga tcttgcaaag aactgtacga ccctatccgg aaggagtgtt ccgatgcgcc
     1981 gagctcactg ggccacaatg gcgtccgcca tggcgggcag cctgctgata ctggggatga
     2041 gtgcctgcgg cgattcgacc aacccctcgg gcgggacggt gctgtcggtt acggaaacca
     2101 acgatatcgc cgatgccgcc gcggacgagg tggatcaggc ggcaggctcg atcacgagcg
     2161 aaggcactgc gttcaacgcg cctccgggcg gcggctgcgc caccgtcaac aacaccaccg
     2221 acaccgatgc cgacggcgcc ccagacaatg ccaccttcac ctttgccctt ccggcctgca
     2281 gcttcaccgg gttccggggc ggcacgctcg agatcaccgg caccatcaac atcagcgatc
     2341 ccacccccaa tgacgccgac ttcaactatc tggcgacgct caccgacttc cagttcaagc
     2401 tgatcagccc catcgcgtcc cgcaccttta cggccacccg caacggcacc cgcgccctga
     2461 gcggcaacgc ggccggcgtc tcgctcagca acaacatcgt tctggttcgg agcgtcccca
     2521 accgggccga cgccaccatc agccacaacc tcctgctcga cttcacgccg gcggcgggcg
     2581 ccgtcctcgc cctgggccag ccgctgccca acgggacctt tacccaaagt gggaccttca
     2641 cctggagccg ggccgatgtc agccggacct tcaccgtgac gacggtggac ccgctggtgt
     2701 gggacgcctc ctgcatcacc gaccggaaga tcgtctcggg tgagatccat gccaccctgg
     2761 ccgagggcgg ctatatcagg acggtgtgga ccggctgcgg cgaggagccg acccggagct
     2821 tcgtgcgggc gacgagctga cgcggacgca ggttgtagaa aggaagggac aggctccgcg
     2881 agggacctac tactctgctc tgggaaacca ctcggggcga gatcgaccca ccccactgct
     2941 cctcatcccg agcgaagcga gggacctagt cctctggaga ttgtgagccg gttgatggtt
     3001 aggtccaaga ttccgcctca tggcccaaac gcggttcttc gtctatatcc tagcaagcca
     3061 ctcgcgtgtc ctttacacgg gagtgagccg tgacctcctc cgccgggttt atcagcatcg
     3121 ccacgtactt gctccgccca ccaaagccaa gaccatcaac acgatgaggc cgatgagagc
     3181 cagtcgaagc agcatccgca accaccgagg ccatgcgcgg tgacgcatga tttggtgaac
     3241 cgctcgggcg cattcaggca aacgccattc aaagcggagg acaaccgtcc gatcatcaag
     3301 catctcgggt cacgaaccct ccaaaatgag tgctccgcct aaccggagcg catcagctgc
     3361 ggcgacttct cagccttcgg ctaaacagcc gcctccgctt gccacagtgc ggcgtagtcg
     3421 agcacccatc caccaggctc aacccggagc acccccacga acttggcggt cccgggcaga
     3481 tcagcctcgt aatcgtactc gctgactgat cggcgggcat agcgctgtat gagcggcgtg
     3541 agcacagccg ccggccactc gagccacgcg gagcgcacct cggccgcctg gtccactgcc
     3601 agatccaagc ggcgtagcgg cagcaggttc gtggccgggg tgaagctgag atccagatcg
     3661 atgcatccag ccaccgcggg acacggcacg ccgttgagtg tccagctacc ggtgtgatcg
     3721 cgtcgaaccc gaagttcaac cgttcgggca ccgcaccaac cgtcaacggt ggcttcggtc
     3781 gtccgccact cagtgtcgca ccgcacccta tagtgaagcg cggtcggccc accctcaccg
     3841 tggaagactg ccataccacg gagctccgca ccgccatccg cctcgcgcag gctggcagca
     3901 tcgtgtccag gcacatcaag ccgccgccag aggataggcc tgccgactcc caggattggc
     3961 accaggtact ctcctccgct cgcaacgcca accgaaggcg gatcagctgc aacgacggta
     4021 tgctagcgcc ccagcgtgat cccgaacgat accggcacga aggtgtcagc cttgcttgcc
     4081 tcatcaaaat ggcgcgtcac ccgatggtag cggacctcag cgaacagccg aagcggcccc
     4141 gcccggcgac gcacgcccgc gccgccattt aggccgaaac ggtgttcgga gaacttcacg
     4201 taggtgccca acccggcgat aagatacggt tcaaccgcgg tcacttgccg ccgccgaaat
     4261 gtccacacca gattggcggt cagcgccagc agatccgcgc cgggtacacc ggtaaacatc
     4321 gcctcgagcc gcccgccaac gttccccttc tgataaccca acccgaggag cccctgccaa
     4381 tcggcgctcg cgcccgaccc gggcaagaat accgggccac tggcggcggc gagcgagagt
     4441 gtctgtgaat gacccggctg ggcgcgcgcc aacccgagga cgacgaggat cgaggcagct
     4501 ctggctagtc gatgcatgcg atacccgtcg cgtgttggtt gtggcccatg gctcgtcggg
     4561 actgaggtgg ggcggcctaa cggaccgcga tagcagctcg cctcagaacg t
//
LOCUS       DASYRV010000269         3310 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2180688, whole genome shotgun sequence.
ACCESSION   DASYRV010000269 DASYRV010000000
VERSION     DASYRV010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3310
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2180688"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            147..1343
                     /gene="dinB"
                     /locus_tag="VGQ24_06985"
     CDS             147..1343
                     /gene="dinB"
                     /locus_tag="VGQ24_06985"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF002677.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEV8454617.1"
                     /translation="MPARILHVDLDAFFVEVCRHNHPELRDVELLVVGGRRDQRGVVQ
                     SASYPARRFGIHAGMPIAEAVRLCPEATFFQGSFGNYRKASLAVRAVLEDFSPLVVMS
                     SLDEAYLDFGGTERLHPISLLPIAEQLRDQVKRMTGLDCSVGIGPNRMIAKLASDCAK
                     PRGLMEVRSGWEEGFLAGLPLRAMPGVGPKTAERWAELGLTNVHQIQTLTERALERLI
                     GADARPLKLRAHGQGGTTLRHERLPKSVSRETTLSRDLRDPDQLERILALLTARVAAQ
                     LRDEQILARAVTMKLRHDDFRTVTRRRTLETATDLDAEIYLAARSLFRDAFEEVRQRD
                     RGVRLIGVAVTNLGTAAEEDLFEPSARSRLRQLTEAVDKVRGKFGFDAVTPGSIFELR
                     RRRPKH"
     gene            complement(1584..2258)
                     /locus_tag="VGQ24_06990"
     CDS             complement(1584..2258)
                     /locus_tag="VGQ24_06990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454618.1"
                     /translation="MSQPPLEPEQPRHPRFRRSVPAFRGRRTILLLAVLLLAAAVAGW
                     YLVSSPRLLFTNELAGPVRLAAEQQTPVTLAPGETVRVATRRGRAMVALWELVRPLSA
                     DGRPMGSEVRGSVVVRGPSGTVRRSAQARGTDADYFAPLITNASEDLLRVMVNAGLEG
                     SLDCGCAVRPGARRVFIGYYPLFQNSTVRATAGNGRSATFRDLGPSVITPDGAIGLRF
                     DAKDLR"
     gene            2696..>3310
                     /locus_tag="VGQ24_06995"
     CDS             2696..>3310
                     /locus_tag="VGQ24_06995"
                     /inference="COORDINATES: protein motif:HMM:NF012348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase beta-grasp
                     domain-containing protein"
                     /protein_id="HEV8454619.1"
                     /translation="MATTVRPTASARKSTSSEVQKVLDLIKEKKIQVVDVKFCDLPGT
                     WQHFSIPAATLDEAMIREGLGFDGSSIRGFQAINESDMLLLPDVSTAFVDPVLSVPTL
                     SLTCDIYDPVTLEPYSRDPRFIAFKAEEYLKTTGIATTSYWGPEAEFFIFNSVRYDQN
                     ANEGYYHIDSEEGVWNSGRNGAPNQGHRPRHKEGYFPVPPVDRLQ"
BASE COUNT          583 a         1084 c         1061 g          582 t
ORIGIN      
        1 ccgtgaccct ggtgcatctc gatgtgggac ggcccttaat cgcctcggtc acgtccgcgt
       61 ccgccgatga gatggggctg cgccagggcg ttctcgtcat cgtggcattc aaggcaaccg
      121 cgattctcct ggtgtaagcg ccaccgatgc ccgcccgaat tctccatgtg gatctcgacg
      181 ccttcttcgt cgaagtttgc cggcacaatc atccagagct gcgcgatgtc gaactcctag
      241 tggtcggcgg caggcgggac cagcggggag tggtccaatc cgcctcgtac cccgcccgcc
      301 gcttcggcat ccatgccggc atgccgatcg cggaggcggt ccggctgtgt ccggaggcca
      361 ccttctttca gggatccttc ggcaactaca ggaaggcgtc actcgccgta cgagccgtgc
      421 tcgaggactt ctccccgctc gtggtcatga gctcgctgga tgaggcctac ctcgacttcg
      481 ggggcaccga acggttgcac cccatttcac tgcttcccat cgccgagcag ctgagagacc
      541 aggtgaagcg catgaccgga ctggactgct ccgtgggaat cggacccaac cggatgatcg
      601 caaagctggc gtcggactgc gccaagcctc gcgggctgat ggaggttcgg tccgggtggg
      661 aagagggatt tctggcgggc ctgccgctgc gagccatgcc cggagtggga ccgaagaccg
      721 cggagcgctg ggccgagcta gggctcacca acgtgcatca gatccagacc ttgaccgagc
      781 gggcgctcga gcggctgatc ggcgccgacg cccggccgct caaacttcgg gctcacggac
      841 aggggggaac cacactccgg cacgagcgac tgcccaaatc ggtgagccgg gagaccacgt
      901 tgtcgcggga cttacgggat ccggatcagt tggagcgaat cctcgcgctg ctcaccgccc
      961 gcgtagcggc gcagcttcgc gatgagcaaa tcctggcccg agcggtgacc atgaagctcc
     1021 ggcacgatga ctttcgaacg gtgacccggc ggcgcacgct ggagacggcc actgatctcg
     1081 acgctgagat ctacctcgcg gcgcgatcgc tgttccggga tgcgttcgag gaggtgcggc
     1141 agcgggatcg tggagtccgt ctcatcgggg tcgccgtcac caacctcggc acggccgccg
     1201 aggaggacct gttcgagccg tctgcgcgga gccggcttcg ccagctcacc gaggcggtgg
     1261 acaaagtccg cggcaagttc ggctttgatg cggtgactcc cggatccatt ttcgagctgc
     1321 gacggcgacg acccaagcac tagatcagtc gtatccttcg cgagtcaccc cgccccacag
     1381 cggagctgag ccgagtcctt cagggttcga gcgccgactt ccccccgccg ccccccttgc
     1441 gctcaacctt caggactcag ctcagttccg ctggccgcca cacccattca acgtcgtctg
     1501 tggcggggtg gagcagtcgg tgtgggtatg ggttagagag ccatgcccgc gccgactgcg
     1561 cggtgcggaa gggcagcctt cggctaccgc agatctttgg cgtcgaatcg aagtccgatg
     1621 gccccgtctg gcgtgatgac gctgggaccc agatctcgga acgtggcgct tcggccattg
     1681 ccggcggtcg cgcggacggt gctgttctga aagagcgggt agtatccgat gaacacacgg
     1741 cgcgccccgg gccgtaccgc gcagccgcag tccagtgacc cttccagacc ggcattgacc
     1801 atcacccgga gcagatcctc gctcgcattg gtgatcagag gcgcgaagta gtccgcatcc
     1861 gtgcctcgag cctgggcgct tcgccgcacc gttccgctgg ggccccgcac caccaccgat
     1921 ccccgcacct cactccccat tggccggccg tcggccgaga gcggccgcac caactcccac
     1981 aacgctacca tcgctcggcc acgccgcgtt gcgacgcgga ccgtttctcc gggcgcgagc
     2041 gtaaccggtg tctgttgctc tgcagccagg cggacgggtc cggcgagctc gttggtgaag
     2101 agcagtcggg gactgctgac caagtaccat ccggccacag ccgcagcgag gaggagcacg
     2161 gcgagcagga gaatggtgcg gcgtccccga aacgccggaa cggagcgccg gaagcgcggg
     2221 tgccgaggtt gttccggctc gagcgggggc tgggacatgg gcggctaaag cttaaccctt
     2281 tggggtcaaa ggagtaggct gcccctgatc gccgacattg tgaagctgtg atcgtgcgta
     2341 atttgcagca ataccgctcc aatggcactt acaggcgccc gattttgcag acacggggag
     2401 ggaaatttgc ataatctgca gaattctctt gacagccgcg tagtcggctc gtatactctg
     2461 ctgagtagcc catgtcttca ggcaaacagg ggtagtcatg cgtctatcag tcatatccat
     2521 gcccttcccg cagccgccca ggccggcggc tttccggcga aaccggcgcc cgcccctgat
     2581 cgaaccgcct ggacctaggc ctgagtagat ggcgtgctca cccgatgccc ctgcgttcga
     2641 tcactcgacg caggggcgtc ttctttaacc cgaacctcga caccgcgaga agcccatggc
     2701 gacgactgtc cgacccactg cctcagcccg caagtccacg agcagtgaag ttcagaaagt
     2761 gttggacctg atcaaggaga agaagattca ggtggtggac gtgaagttct gcgacctccc
     2821 ggggacgtgg cagcattttt cgattcccgc cgccaccctg gacgaggcca tgatccggga
     2881 agggctcggc ttcgacgggt cgtccatccg agggtttcag gcgatcaacg agagcgacat
     2941 gctcctcctg ccggacgtct cgaccgcgtt cgtggatccg gtgctctcgg tcccgaccct
     3001 ctccctgacc tgcgacatct acgatccggt gacgctggag ccgtattccc gggatccgcg
     3061 gttcatcgcc ttcaaggcgg aggagtatct caagaccacc ggcatcgcga ccacgtcgta
     3121 ttgggggccg gaggccgagt ttttcatctt caactcggtc cggtacgacc agaacgccaa
     3181 cgagggctac taccacatcg actctgagga aggggtttgg aactcaggcc ggaatggcgc
     3241 gcccaaccag ggccaccgcc cccggcacaa ggaagggtat ttccccgtgc cgccggtgga
     3301 ccggctgcag
//
LOCUS       DASYRV010000270         3250 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_520289, whole genome shotgun sequence.
ACCESSION   DASYRV010000270 DASYRV010000000
VERSION     DASYRV010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3250
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_520289"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            52..399
                     /locus_tag="VGQ24_07000"
     CDS             52..399
                     /locus_tag="VGQ24_07000"
                     /inference="COORDINATES: protein motif:HMM:NF012345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454620.1"
                     /translation="MGLAYGGSTAKMPYGHRGGNHPVRDLRTDQVLITTQNHGFAVVG
                     DGSGVPGAPDLEVTHLNLNDGTIEGIRHRELPLFAVQYHPEAAPGPHDALPHFAEFMA
                     SLSQALDRQRLSS"
     gene            459..788
                     /locus_tag="VGQ24_07005"
     CDS             459..788
                     /locus_tag="VGQ24_07005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEV8454621.1"
                     /translation="MTKADLVEQVTASIAKTAGPMISKKDCARVVDAFLEAVKEALKQ
                     QHNIEVRGFGTFKIRRRKTRMARNPRTGDPVEVAARPVPVFKPSKELRALVADETGSE
                     AEPAQGM"
     gene            911..1177
                     /locus_tag="VGQ24_07010"
     CDS             911..1177
                     /locus_tag="VGQ24_07010"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HEV8454622.1"
                     /translation="MPSTAISTLTVRVLLFASYAETLGLDAIELTFDGGATVEDAIGR
                     VRALPGGEQLPPKPLCAVNLSQVRLDTPLASGDELALLPPLAGG"
     gene            1179..1676
                     /locus_tag="VGQ24_07015"
     CDS             1179..1676
                     /locus_tag="VGQ24_07015"
                     /inference="COORDINATES: protein motif:HMM:NF014448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HEV8454623.1"
                     /translation="MAYLVTDPIDPGALFALVQSPERGGVACFLGTVRNHHGGREVLR
                     LEYSAYGPMAEVECERIVAEAESGWDVAVALRHRVGQLEIGDTAVAIAAASAHRDEAF
                     LACRYVIEEVKRRVPIWKREVFADGTVEWVGSGAAGQQGSGAVHGRDDKDGVVISSFS
                     ERSPS"
     gene            1673..2749
                     /gene="moaA"
                     /locus_tag="VGQ24_07020"
     CDS             1673..2749
                     /gene="moaA"
                     /locus_tag="VGQ24_07020"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: protein motif:HMM:TIGR02666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HEV8454624.1"
                     /translation="MSAAPRPRGPADLPPRRPAVPLPDLLGRPLRSLRVSVTDRCNMR
                     CRYCMPEQEYVWLPRESILSFEEIDRLTGIFAGLGVDKIRLTGGEPLLRHDLPTLVAL
                     LRRRPELRDIALTTNGILLGRHATELRAAGLSRVTVSLDTLRPERMLEFARSPRHADV
                     VEGIAAAGSAGFGVKLNVVVIRGYNDDELSDLIDFGRRAGAEVRFIEYMDVGGATDWS
                     MDQVVSQPEILATLARRYGPIEPMAKPDAAPAERFSFSDGTVFGVIASTTAPFCRSCD
                     RARLTADGTWLLCLYGENGLDLREALRIGCSDAEIARRIAAAWTARSDRGAEVRAGAS
                     ERAALYQLESLRADPHREMHTRGG"
     gene            2746..>3250
                     /locus_tag="VGQ24_07025"
     CDS             2746..>3250
                     /locus_tag="VGQ24_07025"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HEV8454625.1"
                     /translation="MMALHIALIQPQIPPNTGNIARLCAATDSSLHLIEPLGFSIDDS
                     EVRRAGLDYWDAVDLWVHPNWFAFRDAIDRARCLYFSAKAQQSYWDATYRPNSCLVFG
                     SETEGMPQRILDKHPERCFTIPMTGPVRSLNLSTAVGIVLYEAIRQVRASSRESRVES
                     PMSGVDSP"
BASE COUNT          534 a         1053 c         1084 g          579 t
ORIGIN      
        1 ctttccggct ctggcctgcc gacgttcggg atctgtcttg ggcaccaact gataggactt
       61 gcctacggcg gctcgacggc caagatgcct tatggccacc gcggcgggaa tcatccggtg
      121 cgtgatctgc gcaccgatca ggtgctcatt acgacccaaa accatggctt tgcggtagtt
      181 ggagacgggt ccggcgtgcc cggagctcct gacctcgagg tcactcatct caacttgaac
      241 gacggcacca tcgagggaat tcggcatcgc gagcttccgc tcttcgccgt gcagtatcac
      301 ccggaggccg cgcctggccc gcacgatgca cttcctcact tcgctgaatt tatggcttcc
      361 ctctcccaag cccttgacag acaacggtta agctcgtagt atcggccatc gggtggccct
      421 ccctgcgcgc cgttgcctgt aatccttctg ggggatgaat gaccaaggcc gatctcgtag
      481 aacaggtgac tgcctccatc gctaaaaccg ccgggcctat gatctcgaag aaggattgcg
      541 cccgtgtggt ggacgcgttc ctggaggcgg tgaaagaggc gctcaagcag cagcacaata
      601 tcgaggtccg tggcttcggc accttcaaga tccgccggcg gaagacccgg atggcgcgca
      661 acccgcgcac cggcgatccg gtcgaggtcg ctgcacgtcc ggttcccgta ttcaagccca
      721 gtaaggagtt acgggcgctg gtcgcggatg agaccgggtc ggaggcggag ccggcgcagg
      781 ggatgtagtc cggcggcggt cccaggcaac cgatcacagg tcgctcccga gggaaacctc
      841 aggggcggcc tttctatatg tcctcctaaa tgctgtttcc gcaggcgctc atttggcggt
      901 aactttcagc atgccatcga ctgcaatctc gaccctcacc gtgcgggtgc tcctcttcgc
      961 cagctacgcc gagacgctgg gtctcgacgc catcgagctc accttcgacg gcggggcgac
     1021 ggtcgaggat gcaatcggac gagtgcgggc gctgcccggt ggtgagcagc tgccgccgaa
     1081 gccgctctgc gcggtcaacc tgtcgcaggt acggctggac acgccgctcg cgagtggcga
     1141 cgagctggcc ctactgccgc ctctggctgg gggttgagat ggcctacctg gttaccgatc
     1201 cgattgatcc gggtgccctg ttcgcgctgg tacagtcacc cgagcgcgga ggtgtcgcct
     1261 gcttcctcgg caccgttcga aaccatcacg gtggccggga ggtgctccgg ctcgagtatt
     1321 cggcctatgg tccgatggcc gaagtggagt gtgagcgaat cgtggctgag gccgaatcgg
     1381 gttgggacgt ggcagtggcg ctgaggcatc gggtgggtca gctcgagatc ggcgacaccg
     1441 ctgtggcgat cgcagcagcc tctgcccacc gggacgaggc atttctcgcc tgccgctacg
     1501 tgatcgaaga ggtaaagcgg cgggtgccga tctggaagcg ggaggtgttc gccgacggga
     1561 cggtggagtg ggtgggaagc ggggcagcag ggcagcaggg cagcggggct gtgcatgggc
     1621 gagatgacaa ggatggcgta gtcatctcct ctttcagcga gaggtcgcca tcatgagtgc
     1681 ggccccgcgg ccccgcggcc ccgctgatct accgccccgc cgccccgctg tcccgctgcc
     1741 cgacttgttg ggccgcccgc tccggagcct gcgagtaagc gtcaccgacc gctgcaacat
     1801 gcgctgccgg tactgcatgc cggagcagga gtacgtctgg ctgcctcgcg agtcgatcct
     1861 ctcctttgag gagatcgacc ggcttaccgg catcttcgcc ggcctgggcg tggacaagat
     1921 ccggctcacg gggggcgagc cgctgctgcg ccacgatctg ccgacccttg tggctctgct
     1981 gcgccggcgg ccggagctcc gggacattgc gctcaccacc aacggcatcc tgctgggtcg
     2041 acacgcgacc gagctccgag cggcaggact tagccgggtg acggtcagcc tcgataccct
     2101 gagacccgag cgcatgctgg agttcgcccg tagcccgcgc cacgcggacg tagtggaggg
     2161 gattgcggcg gccggctcgg ccggcttcgg ggtgaagctc aacgtggtgg tgatccgcgg
     2221 gtacaacgac gacgagctga gcgatctgat cgacttcggc cgccgcgccg gcgcggaagt
     2281 ccgtttcatc gagtacatgg atgtcggagg cgccaccgac tggtcgatgg accaggtggt
     2341 gagccaaccg gagattctgg cgacactggc ccggcgctac ggaccgatcg agccgatggc
     2401 caagcccgac gccgcccccg ccgagcggtt cagcttctcc gacggcaccg tattcggcgt
     2461 catcgcgtcg accactgcac cgttctgccg cagctgcgat cgcgcgcgtc tcaccgccga
     2521 cggcacctgg ctgctgtgcc tgtacgggga aaacggtctc gatctgcgcg aggcgctccg
     2581 gatcggctgc agcgatgcag agatcgcccg ccggattgcc gcggcgtgga ccgctcgaag
     2641 cgaccgcgga gccgaagtac gggccggtgc gtccgagcgt gccgcgctgt atcagctcga
     2701 gtctctccgt gccgatccgc accgggagat gcacacccgg ggcggatgat ggcgctccac
     2761 atcgccctca tccagccgca gatccctccc aacaccggca acatcgcgcg gctctgcgcc
     2821 gcgaccgaca gctcgctcca cctgatcgag ccgctcggct tctcgatcga cgacagtgag
     2881 gtgcgccgcg ccggactgga ttactgggac gcggtggatc tctgggtcca tccgaactgg
     2941 tttgccttcc gcgacgcgat cgaccgcgcg cgctgcctct acttctcagc caaggcccaa
     3001 cagagctact gggacgccac ttaccgcccg aacagttgcc tggtgttcgg gagcgagact
     3061 gagggaatgc cgcagcgaat cctggacaag cacccggaac ggtgcttcac cattccgatg
     3121 accgggccgg ttcggagtct caatctgtct acggcggttg gcattgtcct ctacgaggcc
     3181 attcgacagg tgcgtgctag cagtcgcgag tcacgagtcg agagcccaat gtcgggagtt
     3241 gattccccga
//
LOCUS       DASYRV010000271         2485 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1348328, whole genome shotgun sequence.
ACCESSION   DASYRV010000271 DASYRV010000000
VERSION     DASYRV010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2485
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1348328"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..473
                     /locus_tag="VGQ24_07030"
     CDS             <1..473
                     /locus_tag="VGQ24_07030"
                     /inference="COORDINATES: protein motif:HMM:NF027875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycogen-binding domain-containing protein"
                     /protein_id="HEV8454626.1"
                     /translation="LELLRGVELLGSAETYPSNRLTEVPGGRTFTVGISLGIGGPHAP
                     KPLPSPAGIPGVRPGLTRLSLSAPRASRVEVAGDWSDWNSVQLSRTTNGVWYVDLAIP
                     AGVYRYAFRVDGKSWEVPKGVAAVNDGFGGKSAWLSVRGSGQTATQSANRKEAP"
     gene            470..1108
                     /locus_tag="VGQ24_07035"
     CDS             470..1108
                     /locus_tag="VGQ24_07035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454627.1"
                     /translation="MRRTTLALALALAPGYLAAQSQPEGQTESKPASQTAATAGFSAE
                     TRVRLEAMLRVARERELPTGPLTDRIAEGQAKGASEARILAATAQVEAQLMASQEALI
                     RAGRERPSDAEVERGAELIAHGATTAQLETLARGQSSEHRLLMAFEVLTNLAARGVPV
                     ERALEVIGGRLDVSVGAQFSGSANSGTGRSGLGAGVAGTVSGNLGVGLGRRP"
     gene            1214..>2485
                     /locus_tag="VGQ24_07040"
     CDS             1214..>2485
                     /locus_tag="VGQ24_07040"
                     /inference="COORDINATES: protein motif:HMM:NF027232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454628.1"
                     /translation="MSRLTSALALSATVAFASVAHAQQQVADSLLSQLKYRYIGPEGN
                     RVSAVAGVSGDPRTYYAGAASGGLWKSSDAGSHWKPVFDEQPVASIGAIGVAPSDPNV
                     VWAGTGEPFIRSHISLGWGVYKSTDAGTSWKKMGLDNTGRIARIVIDPRNPDVVFVAA
                     LGHAYGPQPERGVYRTSDGGKSWERVLFVNDSTGAVDLVMDPSNPRILLAAMWQIEIH
                     TWGRESGGAGSGLWKSTDGGTTWKRLTGHGLPETPVGRIGLGFARSNPGRVYALIETG
                     DGVLIHGKDAGKGELWRSDDRGESWQMISTDRQLAGRTQYYTRLAVAPDNENEVYFAA
                     AHWSKTLDGGKTTIDPPNAEIPGGDHHDIWIDPLDASRLAVGHDGGISISINRGKSWQ
                     QIQLPIAQMYHVTVDNRVPYFVYGNRQDGPST"
BASE COUNT          431 a          832 c          844 g          378 t
ORIGIN      
        1 gtctcgagct cctgcgcggc gtcgagctgc tcggctctgc cgagacctac ccttccaacc
       61 ggctgacgga agtccccggt gggcgcactt tcacggtggg catctccttg gggatcggcg
      121 gcccacacgc tccgaagccg ctgcccagtc cggccggaat tcccggggtc cgccccgggc
      181 tcacccggtt gagcctgtcg gctccccgtg cgtctcgcgt cgaggtcgcg ggagactgga
      241 gtgactggaa cagcgtgcag ctctcgagga caaccaatgg cgtgtggtac gtggacctgg
      301 ccattccggc cggcgtctac cgctacgcgt ttcgcgtcga cggaaagtcg tgggaagtac
      361 ccaagggagt tgccgccgta aacgacggat tcggcggcaa gtctgcctgg ctcagcgtta
      421 gagggtccgg acagacggca acccaatccg ccaatcgcaa ggaggcacca tgagaaggac
      481 caccctcgcc ctcgccctag ccctggcgcc ggggtacctc gcggcgcaga gccagcccga
      541 gggccaaacc gagagcaagc cggccagcca gaccgcggcg acggccggct tctccgcgga
      601 gacgcgggtc cggctcgagg cgatgcttcg agttgcccgg gaaagagagc ttcccaccgg
      661 gcccctgacc gaccggattg ccgaaggtca ggcgaagggc gcgagcgagg cccggatcct
      721 cgccgcgacc gcgcaagtcg aggcacagct catggcttcg caagaggcct tgatccgggc
      781 cggccgcgag cggccaagtg atgcggaagt ggaacgcggc gcagagctca tcgcgcacgg
      841 ggccacaacc gcccagctcg aaacgctggc tcgcgggcag tcctcggagc accgccttct
      901 gatggccttt gaggtgctca ccaacctggc cgcgcgtggc gtgccagtgg agcgggctct
      961 cgaagtcatc ggcggccggc ttgacgtctc ggtcggcgcc caattcagcg ggtccgccaa
     1021 cagcgggacc gggcggtcag ggctcggcgc cggcgtagcc ggcacggttt cgggcaatct
     1081 gggagttggg ttgggacgca ggccgtaagc gcattgctgt cgctgggcca cggcgctccg
     1141 tacccgttcg cgggcgcggg gcgccgtggt gtatcttgaa gaccttccgc agcccaagcc
     1201 cagaggaatc accgtgtctc gtctcacctc ggctctcgcg ctcagtgcga ctgttgcgtt
     1261 cgcgtcggtc gcccacgctc agcagcaggt cgccgactcc ctgctcagcc agctcaagta
     1321 ccgctacatc ggccccgagg gaaaccgcgt ttcagcggtc gccggcgtca gcggagaccc
     1381 gcgcacctat tacgccggcg ctgcctcggg cgggttgtgg aagtcgagcg atgctggctc
     1441 gcattggaag ccggtcttcg acgagcagcc ggtcgcttcg atcggcgcga tcggtgtggc
     1501 gccctccgac ccgaacgtcg tctgggccgg caccggcgag ccgttcatcc gcagtcacat
     1561 ctcgctcggc tggggagtct acaaatccac cgacgccggt accagctgga agaagatggg
     1621 actcgacaac accggcagaa ttgcccggat cgtgatcgat ccccgcaatc ccgatgtggt
     1681 cttcgttgcg gcgctcgggc atgcctacgg cccccagccc gagcggggcg tgtatcggac
     1741 aagcgacggc gggaagagct gggagcgcgt gctgttcgtg aacgacagca ccggcgccgt
     1801 ggatctcgtg atggatcctt cgaatccgcg aattcttctc gcggcaatgt ggcagatcga
     1861 gattcacacc tggggccgcg agagcggtgg cgcgggcagc ggcctctgga agagcaccga
     1921 cggcgggact acctggaaac ggctgaccgg gcacggcctc cctgagacac cggtgggacg
     1981 gatcggactg ggcttcgccc ggagcaatcc cggccgggtg tatgcgctga tcgagacggg
     2041 ggacggcgtc ctgatccacg gcaaagacgc cggaaaagga gagctgtggc gctccgacga
     2101 tagaggcgag agctggcaga tgatcagcac cgaccgccag ctcgcgggcc gcacccagta
     2161 ctacacccga ctggcggttg cacccgacaa cgaaaatgag gtctattttg ccgccgcgca
     2221 ctggagcaag acgctcgacg gcggcaagac gaccatcgat ccgcccaacg ccgagatccc
     2281 cggcggcgac caccacgaca tctggatcga tccgctcgat gccagccgac tggcggtcgg
     2341 gcacgatggc gggatctcca tctccatcaa tcgcggcaag agctggcagc agatccagct
     2401 gccgatcgcc cagatgtacc acgtcacggt cgacaaccgg gtgccctatt tcgtttatgg
     2461 caaccggcag gacggcccct cgacc
//
LOCUS       DASYRV010000272         2600 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_520349, whole genome shotgun sequence.
ACCESSION   DASYRV010000272 DASYRV010000000
VERSION     DASYRV010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2600
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_520349"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            270..1292
                     /gene="istA"
                     /locus_tag="VGQ24_07045"
     CDS             270..1292
                     /gene="istA"
                     /locus_tag="VGQ24_07045"
                     /inference="COORDINATES: protein motif:HMM:NF033546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEV8454629.1"
                     /translation="MYGWDTLVLLKHYLESGLSKSAIARQLGVSRRAIYHWIHTGQLD
                     RELSGTAGTRRAVPRPTKLDRYQPLIQERLATYPALSAVRLLEECRAAGYAGGYSQLT
                     AYVARIRPRSAPEPVVRFETAPGQQAQFDFAEVRFPWGKRFALLVVLGYSRMLSVEFV
                     ARQTALTVMLGLERAFAAFGGVPHEILFDQMKSVIVEDHRPTGGRLLENPEFLRFAAH
                     WGFRIRACRPYRAKTKGKVERPVGYLRGNFLYGRTFLGDADLADQCARWLVRANQRVH
                     GTTRVVPLSRLAEEQAAFLPLAGRPYRSLVLTPPAPPPQPARTPRVPVERRSLASYTE
                     LVTEAV"
     gene            1292..2113
                     /gene="istB"
                     /locus_tag="VGQ24_07050"
     CDS             1292..2113
                     /gene="istB"
                     /locus_tag="VGQ24_07050"
                     /inference="COORDINATES: protein motif:HMM:NF013828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HEV8454630.1"
                     /translation="MPAPSLRDRLRAQLADLKMPGALEALDDILRRADSGELAAGEAM
                     SALLGSHIALRNQRRLQTAMRSARLPAVKTLADFDFSFQPSVKRDQLESLHTLSFIER
                     RENVVFLGPPGVGKTHLAVSLAVAAAEGGRRVYYATLADLITSLEDAQQAGRLSHRLR
                     TLVFPSLMIIDEIGYLPISRTGAMLFFQLMSRRYEHASTVLTSNKGFEEWGEVLGDEV
                     MAAALIDRLLHHCHIVNIRGNSYRMREHRALATRLAAAPVKPPVPRTRRPSRQEA"
BASE COUNT          405 a          893 c          841 g          461 t
ORIGIN      
        1 gaccgcaaaa ctgtttcgga cctcgccgtc gtacctcgtg tatgaggtcg gttcgcgcgg
       61 gttgaaccct gaggcaggag cggtggctat gcgagtcaaa cggatattgt tcgcggccgt
      121 ctgcggcgtg ggattgagta ctgtcatcgc cgacttcaaa ttgcacagaa tcgccgggga
      181 gaattgcaca cttgggtatc cggcgtgggg cctgacgtcg gggcctcttc cttgggagct
      241 tgcctgctcc tcgttggggg agcaggcctg tgtacggatg ggataccctc gtgctgctca
      301 aacactatct ggagtcgggg ctctcgaagt ccgcgatcgc tcggcagctg ggcgtcagtc
      361 gccgggcgat ctaccactgg atccacacgg gccagctcga tcgtgagctg agcgggacag
      421 ccgggactcg ccgtgccgtc ccccggccga cgaagctgga ccgctaccag ccgctgattc
      481 aggagcggct cgcgacctat cccgcgctgt cggcggtccg cttgctcgaa gagtgtcgcg
      541 ctgccggcta cgccggtggc tatagccagc tcaccgcgta cgtcgcccgc atccgcccgc
      601 ggtccgcgcc cgagccggtc gtccgctttg agaccgcgcc gggccagcaa gcgcagttcg
      661 acttcgccga ggtccgcttc ccctggggca agcgcttcgc gttgctcgtg gtcctcggct
      721 attcgcggat gctctccgtc gaattcgtgg cccggcagac cgcgttgacc gtgatgctcg
      781 ggctcgagcg ggccttcgcg gccttcggcg gcgtccccca cgagatcctc ttcgatcaga
      841 tgaagagcgt gatcgtcgag gaccaccgcc cgaccggcgg ccggctcttg gagaatcctg
      901 agttcctccg cttcgccgcg cattggggct ttcggatccg cgcctgccgc ccctacaggg
      961 ccaagaccaa ggggaaggtg gagcggcccg ttggctacct ccgagggaat tttctctacg
     1021 gccggacgtt tctgggtgac gcggaccttg ccgaccaatg cgcccgctgg ctcgtccgcg
     1081 ccaatcagcg cgtccatggc accacgcgcg tcgtccccct cagccgactg gccgaggaac
     1141 aagctgcctt cttgcccctc gcgggccgtc cgtaccgctc cctcgtgctc acgccgcccg
     1201 cgccgccgcc ccagcccgcg cggacacccc gtgtcccggt cgagcgccgg tcgctggcga
     1261 gctacaccga gctcgtcacg gaggccgtct gatgcccgcg ccctccctcc gcgatcggct
     1321 ccgggcccag ctcgccgatc tcaagatgcc tggggcgctc gaagccctgg acgacatcct
     1381 gcggcgggcc gacagcggcg agctcgccgc cggcgaggcg atgagtgcgc tcctggggag
     1441 ccacatcgcg ctgcgcaatc agcggcggct gcagaccgcg atgcggtccg cccgcctccc
     1501 cgcggtgaag acgctggccg acttcgattt cagtttccag ccgagcgtca agcgcgacca
     1561 actggagagt ctccatacgc tgagcttcat cgagcggcgg gagaacgtgg tctttctcgg
     1621 gccgccgggc gtggggaaga cccatttggc cgtcagcctg gccgtcgctg cggccgaggg
     1681 tggccgccgg gtctactacg ccacgctcgc cgacctgatc acgtcgctcg aggacgccca
     1741 gcaagcgggc cggctgagcc accggctccg caccctcgtc ttccccagcc tcatgatcat
     1801 cgacgagatc ggctacctgc cgatcagccg gacgggagcc atgctcttct tccagctcat
     1861 gtcccggcgg tacgagcacg ccagcaccgt gctcaccagt aacaagggtt tcgaagagtg
     1921 gggggaggtg ctgggcgacg aggtcatggc ggccgccctc atcgaccgcc tcctgcatca
     1981 ctgccacatc gtgaacatcc gcggcaacag ctaccggatg cgcgagcacc gcgctctggc
     2041 cactcgctta gcggccgctc cggtcaaacc cccggtaccc cgcacccgcc ggccaagccg
     2101 gcaggaggct tgagccgcaa cgctgggctg gccgcccccc gagtgtgcaa ttctggtcgg
     2161 cgaaagtgtg caattcaaat cggcgttgac aattcctcct aacaacgagg cggggaaccc
     2221 tctccagtcg actagcatcg cggttccgag cggcgtttac gtgaacgtaa cggcggtggg
     2281 gagtctgaac tacactctca accaaggtcg aagtgcgtgt cagcctgagg tgcccccaac
     2341 cacgccacca ggaggcttgt acactatcgg tccttggggg tttggtgagc ccacgatcag
     2401 ggggcacggg gtgggcgttt ggctacggtt ggatgctaac ggcactttcg aggagatcgc
     2461 actaaacgat cctccagatc cgaccgcaac tacggtcaga gggcgggcgt gggttgctaa
     2521 ttccggggta ctgtgggtcg gccggaactc cgggttctca ggtagttgct acaatccgca
     2581 attgccggat ccctaccagc
//
LOCUS       DASYRV010000273         3304 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1092941, whole genome shotgun sequence.
ACCESSION   DASYRV010000273 DASYRV010000000
VERSION     DASYRV010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3304
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1092941"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(55..543)
                     /locus_tag="VGQ24_07055"
     CDS             complement(55..543)
                     /locus_tag="VGQ24_07055"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEV8454631.1"
                     /translation="MSIAESLLPEFEQEMATTRRLLERVPSDRGQWKPHPKSFALGHL
                     AQLVSWIPGWIANTLTQTELDLTTAPGYSFETTETLLAGLERNVQEARTALQAAKDAD
                     FTVPWSLKHGDRVLFTAPRGAVVRTHISHLSHHRGQLTVYLRLLDIPIPSIYGPTADE
                     RM"
     gene            complement(618..1214)
                     /locus_tag="VGQ24_07060"
     CDS             complement(618..1214)
                     /locus_tag="VGQ24_07060"
                     /inference="COORDINATES: protein motif:HMM:NF042672.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6624 domain-containing protein"
                     /protein_id="HEV8454632.1"
                     /translation="MLWNNFLPALLVITVAAGCRVDRPPADVLAEARRELETRGSTDQ
                     SVREQFGVGGRVDSAQSVAMARIDSANTSWLKAYVARWGWPTTVQVGRDAVQAAFLIV
                     QHAVHDTAFMRAMLPSIQQAYRRGDLDGGSVALLTDRLEVHAGRPQLYGTQLSLRNGR
                     WVLDPIADSAGVDERRHRMGLPPLAEYLRLIDSVFRAR"
     gene            complement(1330..2487)
                     /locus_tag="VGQ24_07065"
     CDS             complement(1330..2487)
                     /locus_tag="VGQ24_07065"
                     /inference="COORDINATES: protein motif:HMM:NF016424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HEV8454633.1"
                     /translation="MKLFPRNPLRLLVLCALGTVLIAWRVAAVRLAHRVHDRAGIMSA
                     EQAELFDGALESLHDLYGVDAQYFIYRDSQAYDARTTALQVARARRVGGDVGARGLVV
                     VLDYGRGRMAVEVGPHLQGIFTDAFTGYLLRTHLSQFNDRANAELGLRGLTLLLTRRI
                     EEALLGNEWDPRRLEQVRDSTALAIGGGAQLAMRFGVDTRARRRLPEYLKVRFAAQPT
                     PRLLLERYREWTTLDPIDHRVGLFTPSSQVALDNMPYTRPFEDLAFFETLAQYEFIVR
                     DSLAVMYATSSPLIGPSLLRLSPDGWQFDVRAEWRCVPALQVRGYTWGWTDCPDPFDS
                     VFYDRLEPVDSVWRMIGGDNRPLPVGKGRYDDRLSLGNEIRRLFRALFHNP"
     gene            complement(2484..2906)
                     /locus_tag="VGQ24_07070"
     CDS             complement(2484..2906)
                     /locus_tag="VGQ24_07070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454634.1"
                     /translation="MAPRRPLLAVLSLLALALLGWRLLHLYSVPRPYDVLLPQTREFL
                     TRAVALDSTALVQTGASAAAVQWALETGRRSPTVLHDLLHDLSVGAGRRVTEGELLVI
                     FHGSSRGSCLNRPLAVTFTGSLEQARIQTISTDCGTRP"
     gene            complement(2906..3247)
                     /locus_tag="VGQ24_07075"
     CDS             complement(2906..3247)
                     /locus_tag="VGQ24_07075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454635.1"
                     /translation="MPDDAEAPYHLMCSACYTPCPAADGHVVPHWRADSRRILTAYRC
                     GSCWRQTLTELRAVVLREEPELPDSFCDFLARQGFTDTHVIRTAAPEQQRQYMLRILD
                     AIENGQLTFHP"
BASE COUNT          615 a         1039 c         1113 g          537 t
ORIGIN      
        1 gcatcgtact tgagtatacg gcgaggcgag cggatcgcct acgccgagcg ccgcctacat
       61 ccgctcatcg gccgtgggac cgtagatcga gggaatcggg atgtcgagca ggcgcaggta
      121 caccgtcagt tggccgcggt gatggctgag atggctgatg tgggtccgaa ccaccgcacc
      181 gcgcggcgcc gtaaacagca cccggtcgcc gtgcttcagg gaccagggca cggtgaaatc
      241 cgcgtccttg gcagcctgga gggctgtccg cgcttcctga acattccgct ccaatccggc
      301 cagcagcgtt tcggtggtct cgaagctgta gccgggtgcc gtcgtcaagt cgagctcggt
      361 ctgggtgagc gtgttggcga tccagcccgg tatccacgag accaactggg ccaggtgtcc
      421 cagcgcgaac gatttcgggt ggggcttcca ctgcccccga tcgctgggaa ctcgctcgag
      481 caggcgtcgg gtcgtggcca tctcttgttc gaactcgggc aagagagatt cggcgatgct
      541 catggggcgc tcccagtcac tgtccggcag ttggaatgag gcaggtccgc cggagcatga
      601 aagtaagtaa ccacggatta ccgggcgcgg aataccgagt cgatgaggcg caagtattcc
      661 gccaacggcg gcaagcccat cctgtgacgg cgttcatcga cgccggccga atccgcaatg
      721 gggtccagga cccagcgacc attccgcaac gacagctggg ttccgtagag ctgcggccgg
      781 ccggcatgta cctccagccg gtccgtcagc agggcgaccg aaccaccatc gaggtcgccc
      841 cggcgatagg cctgttggat gcttggcaac atggcgcgca tgaaggcggt gtcatggacc
      901 gcatgttgta cgatgagaaa cgccgcctgc accgcgtcgc ggccgacctg tacggtggtg
      961 ggccagcccc atcgtgcgac gtaggctttc aaccaggagg tattcgcgga gtcaatccgt
     1021 gccatggcaa cgctttgcgc ggagtcgacc cgccctccca caccgaattg ctcgcggacg
     1081 gactggtcgg tgctcccccg cgtctcgagc tcccggcgcg cctcggcgag cacgtcggcc
     1141 ggcggtctat cgacccggca gccggctgct accgtgatca ccagaagcgc cggcaaaaag
     1201 ttattccaga gcacttctca tcgcttgcgt ccgttcaaac ggggcagtca ggtgcgttac
     1261 cagctctcta tcgatcagtt tggaactctc gtctagcggc cgtccgggct ggggctgaag
     1321 gtgccgccgt catggattgt ggaacagcgc ccggaatagg cgcctgatct cgttcccgag
     1381 tgacaagcga tcgtcatagc gacccttgcc gacaggcagg ggccggttat ctcctccgat
     1441 catgcgccag acactgtcca ccggctcgag tctgtcgtag aagacactgt caaaggggtc
     1501 cggacaatcg gtccagcccc aggtataacc gcgaacctgg agcgcgggga cacagcgcca
     1561 ttccgcccgc acatcgaact gccatccgtc aggtgaaagc cgcaacagtg acggcccgat
     1621 gaggggagac gaggtggcat acatgaccgc caggctgtcc ctcactatga attcgtattg
     1681 cgcgagggtc tcgaagaagg ccaagtcttc gaagggccga gtgtatggca tgttgtcgag
     1741 cgccacctgc gaagaggggg tgaacagccc cacccggtgg tcgatcgggt ccagcgtggt
     1801 ccattctcgg tagcgctcaa gcaggagccg tggagtgggc tgggctgcga accggacctt
     1861 caagtactcc ggcagccggc gacgcgcacg ggtgtcgacc ccgaaccgca tggcgagctg
     1921 agcgcctccg ccgatggcca gggccgtact gtccctgacc tgctcgaggc gacggggatc
     1981 ccactcgttt cccagcagcg cctcctcgat gcggcgggta agcagcagcg tcaggccccg
     2041 gaggccgagc tccgcgttcg cccggtcgtt gaattggctg aggtgggtcc ggagcaggta
     2101 acctgtgaac gcatcggtga aaatgccctg cagatgcggt ccgacttcca cggccatccg
     2161 gccacggccg tagtcgagga ccaccaccaa accgcgcgcg ccgacatcgc ctcccacgcg
     2221 ccttgcccgg gcgacctgca gcgcggtggt gcgagcatcg taggcctggc tgtcccggta
     2281 gatgaaatac tgggcgtcca cgccgtacag atcgtgcaga ctctcgagcg ccccatcgaa
     2341 gagctcggcc tgctcggcgg acatgatacc ggcacgatcg tgcacgcggt gcgcaagacg
     2401 gaccgccgcg acgcgccagg cgatgagcac ggtccctagc gcgcacagga cgagaagccg
     2461 gagcggattc ctggggaaga gcttcacggg cgcgtcccgc agtccgtgct gatggtctga
     2521 atgcgggctt gctccagaga gccggtaaag gtgacggcga gcggccgatt gaggcagctg
     2581 ccgcgactag agccgtggaa tatcaccagc agctcccctt ccgtcacccg acgtccggcg
     2641 ccgacgctga ggtcgtgcaa caggtcgtgg agcacggtgg gactcctgcg tccggtttcg
     2701 agcgcccact gcaccgcggc ggccgaggct ccagtctgca cgagcgcggt ggagtcgagt
     2761 gcaacggccc gggtcaggaa ctcgcgcgtc tgcgggagca gcacatcgta aggtcggggc
     2821 accgagtaga ggtggaggag tctccagccc aacaaggcca gtgccaggag ggacagcacc
     2881 gcgaggagcg gccgacgggg agccattacg gatggaaggt gagctggccg ttctcgatgg
     2941 catcgagaat ccgcagcata tactgacgct gctgctccgg cgccgcggtg cggatcacgt
     3001 gggtatcggt gaatccctgc cgcgccagaa agtcacagaa actgtcggga agctccggct
     3061 cttctcgcag caccacagcg cgaagctcag tgagagtctg gcgccagcag ctgccgcagc
     3121 gataggcggt gagaatccgg cgggagtccg cccgccagtg cggcaccacg tgcccgtcgg
     3181 ctgcggggca aggcgtgtag cacgccgagc acatcaggtg atagggagcc tcggcatcat
     3241 ccggcatgag ctgaagaatc tagcggtttt cagcaggcac tacgagccgg ggactcggct
     3301 aaga
//
LOCUS       DASYRV010000274         9040 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1349473, whole genome shotgun sequence.
ACCESSION   DASYRV010000274 DASYRV010000000
VERSION     DASYRV010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9040
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1349473"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..780)
                     /locus_tag="VGQ24_07080"
     CDS             complement(<1..780)
                     /locus_tag="VGQ24_07080"
                     /inference="COORDINATES: protein motif:HMM:NF015019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proton-translocating pyrophosphatase"
                     /protein_id="HEV8454636.1"
                     /translation="MLFARTVFRPAARLLLVLFLGTALAPVVLPALAAQEAAQGTGAH
                     RPGGEVNLRLPDLNQGDFLGFTGHQILLSGLVVCVLGLLFGLLSYSHVKNLPVHKSMA
                     EISELIYETCKAYMVQQGKLLLVLFGFIGAVIVVYFLLTGLELPKILTILLFSVIGMG
                     GSYGVAWFGIRINTLANSRTAFAALRGRAWPVSEIPLRSGMSVGMMLISVELLFMLAI
                     LLFIPADVAGACFLGFAIGESLGAAALRIAGGIFTKIADIGA"
     gene            complement(833..1123)
                     /locus_tag="VGQ24_07085"
     CDS             complement(833..1123)
                     /locus_tag="VGQ24_07085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454637.1"
                     /translation="MKYFHRTTIAPDQVLAGATRFFGATMAPVEEQRRRRQFAGTIGR
                     IGVTVQAEGGHYTLVTVETNQVGESEADKVAKRFLTLVHTLAEPDHRPIGAY"
     gene            complement(1226..2554)
                     /locus_tag="VGQ24_07090"
     CDS             complement(1226..2554)
                     /locus_tag="VGQ24_07090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-3-phosphate synthase"
                     /protein_id="HEV8454638.1"
                     /translation="MAEQAARQIAPAHGKLGVLCVGLGAVATTFIAGVENVRRGAARP
                     IGSVTQMGTIRLGKRTDKRAPLIREFVPLAALDDLVFGAWDPVPDDAYAAAIHAGVLD
                     RHEHIEPIAAFLKGIKPMPAVFDQNYVKRLEGKHVKPGNSKREQSEALRKDIRDFKAK
                     HKCNRLVMVWCASTEIFISPGPSHWTLEAFEKAIDANDPTIAPSMLYAYAAIMERVPF
                     ANGAPNLTCDFPAMEQLAKSKGVPIGGKDFKTGQTMVKTVLAPMFKARMLGVAGWYST
                     NILGNRDGEVLDDPESFKTKEESKLGVLEYILQPQLYPELYGKIYHKVRINYYPPRGD
                     NKEGWDNIDIFGWLGYPMQLKVDFLCRDSILAAPLVLDLALFFDLSQRAGLTGIQEWL
                     SFYFKSPQVAPGLYPEHDLFIQQIKLKNTLRYLMGEQQITHLGIEYYLED"
     gene            complement(2558..3292)
                     /locus_tag="VGQ24_07095"
     CDS             complement(2558..3292)
                     /locus_tag="VGQ24_07095"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEV8454639.1"
                     /translation="MKLTGDLEKPFYAAVNPLVERLIRAGVRPNTITTIGTGLVLVSA
                     VVYATGHIRLGGLLLLLSGVADTLDGQVARGGAMVTRFGAFYDSTLDRVGDGATFIGI
                     GAFLLTAPDVAYRVPAVILCMVAILASVLVSYARARAEGLGLDCKVGIAQRAERILGL
                     GLASVVFGAGRHALLLEAIVALLAVASIITVVQRFVYVHRHAGQVDEALLAEEISQAE
                     QVKHLSDVKLPTDVKRPTLDPLAKGS"
     gene            complement(3413..4678)
                     /locus_tag="VGQ24_07100"
     CDS             complement(3413..4678)
                     /locus_tag="VGQ24_07100"
                     /inference="COORDINATES: protein motif:HMM:NF018743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1343 domain-containing protein"
                     /protein_id="HEV8454640.1"
                     /translation="MHRSLVLLGLWGWCLGCASNPRSETGNGAGTRASPLRVRPGIEV
                     LLSDSLHLIRNRRIGLVTNQSGVDPQGERDLDRLIASGARVTAVFAPEHGLRGVIDVD
                     VAPGSRQETDSATGLPVYLLHDGVRLHPPTAAMLANVDVLVIDLQDAGARYYSYPAGV
                     ATILGAAAAQRLPTIVLDRPNPIGGAVQGDVQDSVTASAVARFPIAMRHGMTIGELAR
                     LANSVLRLGAELHVVPVRGWRRSMDFDATGLPFVPPSLNLRTLESLYHYPGLCLFEGT
                     NVSVGRGTDAAFEQIGAPWLDTAMVLARLRQAAPPGVRFTGVTFTPRAPGDGKYPDTL
                     VAGIRLTTTDRAAYDPTLTAVHLLGTLRAVHLTDFAFRAAQFDRLAGGPELREGLVRG
                     EAATTIAQRWREELAQFRVWRRPFLVYPE"
     gene            4673..6421
                     /locus_tag="VGQ24_07105"
     CDS             4673..6421
                     /locus_tag="VGQ24_07105"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HEV8454641.1"
                     /translation="MQSKYLVLVVVPLWACGGPGPVPGPQPAQFPLQATPVAVDVDAL
                     VASLSVRDKIAQLIMPWIAGSYAAFDDEAFRRMQGWVDSLHVGGLIVSVGSPFDVAAK
                     LNRLQERSPLPLLIASDLEAGTAIRLNGGTPFPPNMGIAATGSDTDAYEVGRITALEG
                     RAVGIHFAFAPVADVNNNPANPIINVRSFGEEPHAVGRLVAAEIRGLQEHGMLATAKH
                     FPGHGDTGADSHILLPVLTANWARLDSVELVPFRSAIAAGTAAVMSAHIALPGIDPGQ
                     LRPGSTAPNILTGILRDSLRFTGLIVTDALNMGGIANEYGAEAAVRAFVAGSDLLLQP
                     ADPKIAIDAMSAAVARREISPERLDRSVRKVLELKRHLGLFTQRIAPLDSVPLVVGRA
                     EFRQEARDMATRSLVMVKDVNGTVHGLKNARQPLTLVTYGDEDYRAVGTTLASELRAW
                     GFAITVFKLWPASGPASYDSAAAAIERNPVTLFAASDKPIASRGTIGLPDAMMALIGT
                     TALSRPTILVSLGNPYLVSRLPEVGSYIIGWRSNPVTEQAVARALAGATAITGRLPIT
                     IPPRYARGWGVQRRVP"
     gene            6523..7608
                     /locus_tag="VGQ24_07110"
     CDS             6523..7608
                     /locus_tag="VGQ24_07110"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEV8454642.1"
                     /translation="MTEFLDSVVASGAAPGAVLAITRDGERFVYGSGQLGADEPGSPG
                     AATIYDLASLTKVVGLVTGAMLAVDEGRLDLDAPVQQYVPAFVGAGKERVTGRLLLAH
                     ASGLPAWLPLFREAGSRTEVFTRVDTTPLSSIPGTVEVYSDLGAIILTQVLEAIYQQR
                     LDSLLARRVFGPLGMSATGYLPGADQRDRIAPTEMDPWRGRMLRGEVQDENAALMDGV
                     SGHAGLFGSAEDLLIFAEWIIEEWDGGTAVGRKHTHSVPSAVPSFRRPVVREFTRRQN
                     IVPGSTRALGWDTPSPGGSAGSRLSPRSFGHTGFTGTSLWIDPERHLAIILLSNRVNP
                     TRDNPRWAPLRAKLADLVMTTLFEDAR"
     gene            7605..>9040
                     /locus_tag="VGQ24_07115"
     CDS             7605..>9040
                     /locus_tag="VGQ24_07115"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter family protein"
                     /protein_id="HEV8454643.1"
                     /translation="MRLTGSDWLIIAVYFIVSAAIGLAYTRKASRSLTDYFVSGRALP
                     WWLAGTSMVATTFAADTPLAVSGFVAKYGVAGNWLWWNGAFSSVLTVFFFSRLWRRAG
                     VLTDVEFAELRYGGRPAAVLRGFRALYLALPINLIIMGWVTRAMVTILQVTLNVNPWY
                     AAILLFAVTALYSVFSGLWGVIVTDAFQFAVAMGGTIFLAVLAVKSVGGLDVVVEKAA
                     AHFGSTDAAFGVLPPLDQAWLPLSTLLIFLCVQWWAAWYPGQEPGGGGYVVQRILSAK
                     DERHGLLATLWFTIAHYALRPWPWILVGFVGLIRYPGLANPEEGYVRVMVDVLPSPFK
                     GLLLAAFAAAYMSTISTHLNWGASYLVNDVYLRFLKPDASPRAQVFASRTATAVLMVC
                     SLVVMSFLSSVEQGWKLLIGLGAGTGLVFILRWYWWRVNAWSEISAMAASFVTSLVLA
                     RYGYTLDDLSRPTYAVTMLITVLVTTVV"
BASE COUNT         1583 a         2898 c         2920 g         1639 t
ORIGIN      
        1 ggcgccgatg tcggcgatct tggtaaagat gccgccggcg atacgaagcg cggccgcgcc
       61 gagcgattca ccgatggcga atccaaggaa gcaggcgccc gccacatcgg cgggaatgaa
      121 gagcaggatc gccagcatga acagcaactc caccgagata agcatcatgc cgacgctcat
      181 cccggaccgg aggggaatct cggaaaccgg ccacgccctg ccccgcaacg cggcaaaagc
      241 ggtccgggag ttggccaggg tgttgatccg gatgccgaac caggcgaccc cgtagctgcc
      301 gcccatgccg atgacgctga agaggaggat ggtgagaatc ttgggaagct cgaggccggt
      361 cagcaggaag tacaccacga tgacggcgcc gatgaacccg aacagaacca gcagcagctt
      421 gccctgctgt accatgtagg ccttacaggt ctcgtagatg agctccgaga tctcggccat
      481 gctcttgtgc accggcagat tcttcacatg ggaatagctc aggagaccga acaacagacc
      541 cagcacacag accaccaggc cggacaggag gatctggtga ccggtgaagc cgaggaagtc
      601 tccctgattc agatccggta atcgaaggtt tacttcaccg ccggggcggt gtgcgccggt
      661 gccttgcgcc gcttcctgcg cggcgagggc cggaagtacg accggagcga gggccgtgcc
      721 gaggaaaagt accagcagca gcctggcggc aggtcggaac accgtacggg cgaaaagcat
      781 cgtcgaatgt ctcctgggct tcactgacat gggtgcagtc gcgagagaga gatcagtagg
      841 cgccaatggg gcggtggtca ggctccgcca gcgtatggac cagcgtcaga aagcgtttgg
      901 ccaccttatc ggcctcactc tctccgacct gattggtctc aaccgtgacg agggtatagt
      961 ggccgccctc agcctggacg gtcacgccaa tccggccgat ggtaccggcg aactgccggc
     1021 ggcggcgctg ttcctccacc ggcgccatgg tcgcgccgaa gaagcgcgtc gcgcctgcga
     1081 ggacctggtc gggtgcaata gtagtcctgt ggaagtattt catctatcct cacaactgcg
     1141 tgaacggtaa acagtaaacg gtgaacggct cccctcccat cttccccgtt cattgttaac
     1201 cgttcactgt ttacgcagtt cacacctaat cctcgagata gtattcaatc cccagatggg
     1261 tgatctgctg ctcccccatc aaatagcgca gcgtgttctt gagcttgatc tgctgaatga
     1321 agaggtcatg ctccgggtac aggccaggcg ccacctgcgg gctcttgaag tagaacgaca
     1381 gccactcctg gattccggtg agtccggccc gctgggaaag atcgaagaat aaggccagat
     1441 cgagtaccag cggggcggcg aggatggaat cacggcagag gaaatcgacc ttgagttgca
     1501 tcgggtagcc aagccacccg aagatgtcga tgttgtccca gccctccttg ttatcccccc
     1561 gtggcggata gtagttgatc cgcaccttat ggtagatctt gccgtacagc tcggggtaga
     1621 gttgcggctg gagaatgtac tccagcaccc ccaacttcga ctcttccttg gttttgaagc
     1681 tctcggggtc gtccagcacc tcgccgtcgc gattgcccag gatgttggtc gaataccagc
     1741 ccgccacgcc gagcatgcgc gccttgaaca tcggggccag caccgtctta accatcgtct
     1801 ggccggtctt gaaatccttc ccgccgatgg gaacgccttt actcttggcg agctgctcca
     1861 tggccgggaa gtcgcaggtg agattggggg ccccgttggc gaagggcact ctttccatga
     1921 tggcggcgta ggcgtagagc atggagggag cgatcgtcgg gtcgttggcg tcgatcgcct
     1981 tctcgaacgc ctcgagagtc cagtggctcg gccccgggct gatgaagatc tcggtcgagg
     2041 cgcaccagac catcaccagg cgattgcact tgtgcttcgc cttgaagtca cggatgtcct
     2101 tgcgcagcgc ctccgactgt tcccgcttgc tgttgcccgg cttgacgtgc ttcccctcga
     2161 gccgcttcac gtagttctgg tcgaagaccg ccggcatggg cttgatgccc ttgaggaacg
     2221 cggcgatcgg ctcgatatgc tcgtgccggt ccagcacgcc tgcgtggata gcggcggcat
     2281 aggcatcgtc ggggaccgga tcccaggcac cgaagacgag atcgtccagc gccgccagag
     2341 ggacgaactc tcgaatcagc ggcgcgcgct tgtcggtgcg cttccccagc cggatcgttc
     2401 ccatctgggt caccgacccg ataggacgcg cggccccacg gcgaacattc tccacgccgg
     2461 cgatgaacgt ggtcgcgacc gcccccagac ccacacacaa cacgccgagc tttccgtgag
     2521 ccggcgcgat ctgccgggcg gcttgttctg ccactgctca tgatcctttc gcgagagggt
     2581 ccaatgtggg gcgcttgacg tcggtaggga gcttcacatc cgagaggtgt ttaacctgct
     2641 ccgcctggct gatctcttcg gcaagcagcg cctcatccac ctggccggcg tgccggtgga
     2701 catacacgaa tcgctgcacc acggtgatga tggacgcaac ggcgagcagc gcgacgatgg
     2761 cctcgagcag cagggcgtga cggcccgccc cgaacaccac cgaggccagg ccgaggccca
     2821 ggatgcgctc cgcgcgctgg gcgatgccca ctttgcaatc cagaccaagt ccttcggccc
     2881 gggcccgggc gtaggagacg agcactgagg ccaaaatggc gaccatgcag aggatcacgg
     2941 cgggaacccg gtaggctaca tcgggagcgg tgagcaggaa ggccccgata ccgatgaagg
     3001 tggccccgtc ccctacccgg tccagggtag agtcgtagaa ggcgccgaag cgggtcacca
     3061 tcgccccgcc ccgcgccacc tggccgtcga gcgtatcggc gacgccgctg agcaggagca
     3121 ggagcccgcc gagacggatg tgtcccgtgg cgtacacgac cgcggagacg agcacgagac
     3181 ccgtcccgat ggtcgtgatg gtgttcggcc gcacaccagc ccggattagc cgctccacca
     3241 acggatttac cgcggcgtaa aacggctttt ccagatcacc cgtcagcttc acgctcgtct
     3301 caatcctcag caggggacca aggcaggctc cacctccgga gacccgttga tttccgggcg
     3361 aaaggataac tgccagaacc gcttagggca atcggaggat gccgaagcgg ctctattccg
     3421 gatagaccaa aaagggtcgc cgccagaccc ggaactgggc cagttcctca cgccatctct
     3481 gggcgatggt agttgccgcc tctccccgca ccagcccctc gcgcagctcg ggcccgccag
     3541 ccagtcggtc gaattgggcg gcccggaacg cgaagtcggt caggtgaacc gctcgaagag
     3601 ttccaagcag gtggacggcg gtcagggtcg gatcgtacgc tgcgcgatcg gttgtcgtca
     3661 gacgaatccc cgcaaccagc gtatcaggat attttccgtc gcccggcgcg cggggggtga
     3721 aggttacccc ggtgaatctc acacccggtg gcgccgcctg acggagccgg gccagcacca
     3781 tagcggtgtc gagccaaggt gcgccgatct gttcgaaggc ggcgtcggtt ccacggccaa
     3841 ccgagacatt ggtcccttcg aacaggcaga ggccgggata atggtacaga ctctcgaggg
     3901 tgcgtagatt caggctgggg ggaacgaagg gtagaccggt cgcatcgaaa tccatcgagc
     3961 ggcgccaacc cctcactgga acgacgtgga gctcggcgcc aagccgaagc actgagttgg
     4021 cgagacgggc aagctcgcct atagtcattc catgccgcat ggcgatcggg aatcttgcga
     4081 ccgccgatgc ggtcacgctg tcctgaacat ccccctgaac cgcacctcca atcggattag
     4141 gccggtcgag cacgatcgtg ggaagccgct gcgcggcggc ggcgcccagg atggtggcga
     4201 ctccggccgg gtagctgtaa taccgcgccc cggcatcctg gaggtcgatg accaggacat
     4261 ccacattcgc gagcattgcc gcggtaggtg gatggagtcg tactccatcg tgcagcagat
     4321 agaccggaag accggtcgcc gagtcggtct cctgccggct gcccggcgct acgtcgacat
     4381 cgatgacgcc gcggagccca tgctccggcg cgaaaactgc tgtgacccgg gcgcccgagg
     4441 caatcaggcg gtcgagatca cgctctcctt gagggtccac ccccgactga ttggtcacca
     4501 gaccgattcg gcggttgcgt atcaggtgca gactgtcgga cagcaagacc tcgatgcccg
     4561 ggcgcacccg cagcggcgac gcgcgggttc cggcgccgtt gccggtttcg gaccgcggat
     4621 tgctcgcgca gccgagacac cacccccaca gtcccagtag aacgagagat ctgtgcaatc
     4681 caagtacctc gtgctcgtgg tggttcctct gtgggcctgc ggcggacccg gtccggtgcc
     4741 ggggcctcag cccgcgcagt ttccgcttca ggccacgcca gtcgcggtgg acgtcgacgc
     4801 gctcgtcgct tctctctcgg tccgggacaa gattgcccag ctgatcatgc cgtggatcgc
     4861 gggcagctac gccgcgttcg atgacgaggc gttccggcga atgcagggct gggtggattc
     4921 cctccacgtg ggcgggctga tcgtgtccgt cggctcgccg ttcgatgtgg ccgccaagct
     4981 gaaccggctg caggaacgct cgcccttgcc gctgctgatc gcctcggatc tcgaggccgg
     5041 caccgcgatt cggctcaacg gtggcacgcc gttccctccc aatatgggca tagcggccac
     5101 cgggagcgac acggatgcct acgaagtggg ccgaatcacc gcgctggagg gccgagcggt
     5161 cggcatccat ttcgcgttcg cgccggttgc ggacgttaac aacaatccgg ccaatccgat
     5221 catcaatgtg cggtccttcg gagaggagcc gcatgcggtg ggccggctgg tggcggcgga
     5281 gattcgagga ctacaggaac acggaatgct cgccaccgcc aagcacttcc ccggccacgg
     5341 cgacaccggc gcggactctc acatactgct gccggtcctc acggccaact gggcccgtct
     5401 ggattcggtc gagctggtgc cgtttcgaag cgccattgct gccgggacgg cggcggtcat
     5461 gtccgcgcac atcgcgctgc ccgggatcga tcctgggcaa ctgcgtccgg gtagcaccgc
     5521 cccgaatatc cttaccggca tcctgcgtga ttcgctccgc ttcaccgggc tcatcgtcac
     5581 cgacgcgctg aacatgggcg ggatcgcgaa tgagtatggc gcggaggccg cggtgcgggc
     5641 cttcgtggcc gggtccgacc tgttgctcca accggccgat ccgaagatcg ccatcgacgc
     5701 catgagcgct gccgtcgccc ggcgcgagat ctcaccggaa cgcctggacc gatccgtccg
     5761 gaaggtcctc gagctgaagc ggcacctcgg gctgttcacc cagcgaattg ctccactcga
     5821 cagcgttcca ctggtggtgg gccgagcgga attccggcag gaggcccgcg acatggccac
     5881 ccggtcactg gtgatggtga aggacgtgaa cggaacggtt cacggactca agaacgcccg
     5941 ccagcctctc accctggtca cctatggcga tgaggactac cgcgcggtgg gaaccacgct
     6001 ggcttccgag ctccgtgcgt ggggcttcgc catcacggtg ttcaaactct ggcccgcaag
     6061 cgggccggcc agctacgatt ctgcggcggc cgccattgag cgcaatccgg tgaccctgtt
     6121 tgcagcatcc gataaaccga ttgcctcacg cggcacgatc ggtctgcccg acgccatgat
     6181 ggcgttgatc ggtaccaccg ccttgtcccg gcccaccatt ctggtctcgt tggggaatcc
     6241 gtacctggtc agccggcttc ctgaagttgg atcgtacatc attggctggc gatccaatcc
     6301 ggtcacggaa caggcggtgg cacgggcatt ggcgggagcc acggccatta cggggcggct
     6361 tcctatcacg atcccaccga gatatgccag aggctggggc gtgcaacggc gagtgccgtg
     6421 actcggagcc gggcaccact cgcattggtg ctgctggctt gtgttcccca ccccctacct
     6481 tcccccacac ccgtgtcgct cgacatggct cgattgaagc cggtgacaga gtttctcgat
     6541 tcagtggtgg cgtcaggcgc cgcgccggga gcggtgctcg ctattacgcg tgacggcgag
     6601 cggttcgtgt acgggagcgg tcaactcggc gccgacgagc cgggatcgcc gggtgcggcc
     6661 accatctacg acctggcatc gctcactaag gtggtcgggc tcgtgaccgg cgcaatgctg
     6721 gctgtggacg agggacggct ggatttggat gccccggtgc agcagtacgt ccccgcattc
     6781 gtcggtgcgg gaaaggagcg ggtcacgggt cgcctgcttc tggcgcatgc gagcggactg
     6841 ccggcgtggc tgccgctgtt ccgcgaggcc gggagccgga ccgaggtctt tacccgggtc
     6901 gacacgacgc cgctgagttc gatccccggc acggtggagg tctattccga tctcggcgcg
     6961 atcattctca ctcaggtgct cgaagcgatc tatcagcagc ggctggattc gctgcttgcg
     7021 cgccgggtct tcggaccgct aggcatgagc gcaacaggct atctgccggg tgcggaccag
     7081 cgggatcgca tcgcgccgac cgagatggat ccgtggcgag gccgcatgct ccggggcgag
     7141 gtccaggatg agaacgcggc gctgatggac ggcgtatcgg ggcacgccgg gctattcggg
     7201 tcggcggagg acctgctgat tttcgcggaa tggattatcg aagaatggga cggcgggacg
     7261 gcggtagggc ggaagcacac ccactcagtg cctagcgccg taccgtcgtt ccgccgtccc
     7321 gtcgtgaggg aattcacccg gcggcagaac atcgtccccg gctcgacccg cgccctcggc
     7381 tgggacaccc cgtcaccggg aggcagcgcc ggcagccggc tctcgccccg gagcttcggg
     7441 cacaccgggt tcaccggcac atcgctctgg atcgaccctg agcgccacct tgcaatcatc
     7501 ctgttgagta atcgggtgaa cccgacccgg gacaacccgc gctgggctcc gcttcgcgca
     7561 aaactcgcgg atctcgtgat gaccaccctc ttcgaggacg cccgatgaga ctcaccggct
     7621 ccgactggct catcatcgca gtctatttca ttgtctcggc cgctatcggg ctcgcctaca
     7681 cccggaaggc cagccgatca ctcaccgatt atttcgtctc gggacgcgcg ctcccctggt
     7741 ggctggccgg cacgtcgatg gtcgccacca cattcgcggc cgacacgccc ctggcagtct
     7801 cgggattcgt ggccaagtac ggggtcgccg gcaactggct gtggtggaat ggagccttct
     7861 ccagcgtcct gacggtgttc ttcttctccc gcctctggcg acgggcagga gtcctcaccg
     7921 acgtggagtt cgcggagcta cgatacgggg gacgccctgc cgcggtgctg cgcggattcc
     7981 gcgccttgta cctggccttg ccgatcaacc tcatcatcat gggatgggtg acgagggcga
     8041 tggtcaccat tctccaggtg accctcaacg tgaacccatg gtacgctgcc atactgcttt
     8101 ttgcggttac ggcgctgtac agcgtcttct ccggactctg gggcgtcatt gtgacagacg
     8161 cctttcagtt cgcggtcgcc atgggcggca ccatttttct cgccgtgctt gccgtgaagt
     8221 cggtgggcgg gctcgatgtc gtggtggaaa aggcggcggc ccactttggc tccaccgatg
     8281 ccgcattcgg cgtcctgccg cccctggacc aggcttggct tcccctatct accctcctga
     8341 tttttctctg cgtgcaatgg tgggcggcct ggtacccggg gcaggagccg gggggtggcg
     8401 gatacgtggt gcaacggatc ctttccgcca aggacgaacg gcacggcctg ctggcgacac
     8461 tctggttcac catcgcgcac tatgcgctcc ggccatggcc gtggattctg gtggggttcg
     8521 ttggactgat ccgctatcct gggctcgcca atcctgaaga aggatacgtc cgggtgatgg
     8581 tcgacgtgct gccttccccg ttcaagggac tgcttctggc cgcctttgcc gcggcgtaca
     8641 tgagcactat cagcactcac ctgaattggg gcgcctcgta cctcgtgaac gatgtgtacc
     8701 tgcgcttcct caagccggat gccagccctc gcgcgcaggt cttcgcctcg aggaccgcca
     8761 ccgcagtgct gatggtctgc tctctggtcg tgatgagctt cctgagcagc gtggaacagg
     8821 gctggaagct gctgatcggc ctcggggcag gcaccggact cgtgttcatc cttcgctggt
     8881 actggtggcg agtcaacgcg tggtccgaga tcagcgccat ggcggcctcg tttgtcacgt
     8941 ccctggtgct tgcccgatac ggctatactc tcgacgacct ttctcgtccg acgtatgccg
     9001 tcaccatgct gatcacggtg ctggtgacca ccgtggtgtg
//
LOCUS       DASYRV010000275        10123 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2759639, whole genome shotgun sequence.
ACCESSION   DASYRV010000275 DASYRV010000000
VERSION     DASYRV010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10123
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2759639"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..659
                     /locus_tag="VGQ24_07120"
     CDS             <1..659
                     /locus_tag="VGQ24_07120"
                     /inference="COORDINATES: protein motif:HMM:NF021454.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2167 domain-containing protein"
                     /protein_id="HEV8454644.1"
                     /translation="NENPTDGDERGTVICPGPGENSGMWFVVFTYRGSGYVKDDERDA
                     INADKLLAQLRKGNKAGNEERRRHGWETLELDGWERPPYYDERTNNLTWGLRLIDASG
                     DTTINHSVRLLGRGGVMEVDLVAGPTLAQAAVPDFETMLAGFTYVPGQQYAEWRAGDK
                     VAAYGLTALVAGGAGALAAKSGILAKLGKGVIALVAAALAGLKSLATRVFGKKGNATA
                     "
     gene            656..1528
                     /locus_tag="VGQ24_07125"
     CDS             656..1528
                     /locus_tag="VGQ24_07125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454645.1"
                     /translation="MMDGAAVDTSTMLVLAAIALAEGTGWVPAGSVMLRRFLSGAWQI
                     EEPAGPGNRLRLVHWWPPWTDTLVVPPRSNGAVPLSQADLVARIAATATVRTAARAIG
                     AVTLTLLVVGVPAGFGLAGAIGGLTVLGSVAAGQITLGLLGWRGLASLRAARRERMRL
                     LTASLNPFTAPALASRLLAAACAGATPATVARTLLSPERWASWFRPRAYDAGVAQKLD
                     EELGKDLEAADDAIAQVLAERPKMARNGRWCPRCAATYHAGATACADCNIDLLEASEG
                     VYPTARFRPAQSLS"
     gene            1539..2228
                     /locus_tag="VGQ24_07130"
     CDS             1539..2228
                     /locus_tag="VGQ24_07130"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEV8454646.1"
                     /translation="MPRLQTALFDLDGTLIDSIRLILDSYHHTLTQHNLPARTDEDWL
                     MGVGTPLSVQFSEWRESPEVLEAMIATYREYNLKHHDSMVTVYPGVLEAVREIKAAGI
                     QTGLVTSKNRLGALRGLQLVGFEALMDVLVCADEVTNPKPHPEPVEKAVALLGADPAS
                     TVYVGDSIHDMHSGRAAGVKTAAALWGPFGRGHLESASPDYWLESPRDLVALLIRPPV
                     PPAAAASACPP"
     gene            complement(2176..4965)
                     /locus_tag="VGQ24_07135"
     CDS             complement(2176..4965)
                     /locus_tag="VGQ24_07135"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEV8454647.1"
                     /translation="MTYSLLTRPDRLAALRHTALLDTPPEEGFDRLTRMASRLLGTPV
                     ALISLISEDRQFFKSAIGLPEPWASRRAAPLSFSFDAQVVSTGEQLVVEDARRHPLLR
                     HSTAIRELGWVAYAGVPLVTRDGQTVGSFSVVDKMPRLWSERDIALLKDLAASVVTEI
                     ELRREMAWRRQAEQGRRDSDEQFYSTFEQSGIGMAVMSPDGRWLRVNQALCDLLGSAP
                     DDLVGFSAEARTHPDDVPADREAIRLLLTGECRTYTVEKRYLTRSGEVLWALVNVSLV
                     TDAEGKPTHLIAAIQDITERKQAEAALRASEERYRFVAQASKEVVWDWDLLTDEVVWD
                     EGTGPLLDYQPAELGATADWWYERLHPEDRERVVGSLDSAIRQGETVWSEEYRFRRAD
                     GSYADVQDRARIVHDETDAPVRVVSAMADLTEGRRSERRLHQVLDALPTGVWIVDRQG
                     RIVLDNIASREIWGPVRYLELDQLPAYNSRWAASGQPFQPNEWGVAQALESGESVLNQ
                     EITIDIPGGGQKTIVNSALPIRDAEGQTVGALNLSEDVTGKRAEEEAGSQREEEERQA
                     DKMDAVGRLAGGIAHDFNNLLTGILTYSELILQELRPSDPLRADIEQIRHAGQRAAGL
                     TRQLLAFSRRQVLQPRVVSLNALATELEPMLSRLLGTDVALDLLLAPEAGNVTVDPGQ
                     MEQVLVNLITNARDAMPRGGRVSITTANAQLRDTPYVAIAVKDTGSGMDAATQARVFE
                     PFFTTKQGSSGTGLGLSTVFGIIEQSGGHIVVESQPDQGSEFTIYLPRYTGSEPALST
                     AERDVPQGGSETLLLVEDEATVRSSVRRLLEWHGYRVIEAGNGREALRIYEDNPEAID
                     LVLTDLVMPEMGGHELVEQLRIRNPALRAVFMSGYTERPLANDTSMHPATGFVEKPFT
                     VDTLMRRLREALEAE"
     gene            5324..5944
                     /locus_tag="VGQ24_07140"
     CDS             5324..5944
                     /locus_tag="VGQ24_07140"
                     /inference="COORDINATES: protein motif:HMM:NF013982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 family protein"
                     /protein_id="HEV8454648.1"
                     /translation="MRLLPRDEKFFDLFTSVASLSVEAAKLQLDLLKADGLHRPAIVD
                     AIKRLEHEADQVTHEVVTRLDRVFITPLDREDIHLLASRLDDVMDLIDGTAHRVQMYH
                     AGEAPAGAMLLAEVVLRATESLLVAVQALEKNKSGVVLEACAQVKRLEEEGDSVYHEW
                     VARLFDGRPDALVVIKWKEIYDTLEKTLDHMEDAGNVLESISIKHG"
     gene            5974..6990
                     /locus_tag="VGQ24_07145"
                     /pseudo
     CDS             5974..6990
                     /locus_tag="VGQ24_07145"
                     /inference="COORDINATES: protein motif:HMM:NF013543.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
     gene            complement(7031..8179)
                     /locus_tag="VGQ24_07150"
     CDS             complement(7031..8179)
                     /locus_tag="VGQ24_07150"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HEV8454649.1"
                     /translation="MRIALFSEVYWPMVSGVGVTLLRLTRALEDRGHQVRVYSATYPL
                     PRGETDRPEVHRSPSIPLFLYQDVQWAFPRLRDVIEDAGRFRPDVVHVATEFALGLAG
                     LKAARRLGLPLVASAHTDYDKYATRYGVDWALRAGWHYLRWFYGQAHTVLCPSRIYEE
                     HLHSRGVTHTGVWSRGVDPAFFHPRFRSEGYRRALGLGPNDLLVTYIGRIAREKNLTL
                     LLEAWDALAPYRGSAKLALVGRGPLEEEIRRREIPGVHVTGLMHGLELSAAYSSADIF
                     AFPSATETFGNSLLEAMGSGLPSLVAAAGGVLEFAKHGENAWLVAPNSTGAIAHGLRR
                     LIEDPALRRRLSEGALRTAGERGWDEVYDRLLEDYRDAIESRRMVRAA"
     gene            8375..9004
                     /locus_tag="VGQ24_07155"
     CDS             8375..9004
                     /locus_tag="VGQ24_07155"
                     /inference="COORDINATES: protein motif:HMM:TIGR01065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HEV8454650.1"
                     /translation="MRIREPFNGVSHLVGLALACAGTWALLRWANGPWETAAFTIYGG
                     TLILLYSISFLYHSLPVAGRPLRALRTLDHIAIYFLIAGTYTPVALITLHNRLGWSLL
                     AAVWLIALAGIPFKLLYLDAPVWLSTGTYLAMGYLALVAIVPLAQAVSLSGLLWLVAG
                     GAAYTVGAVVYSHRRPDPFPGRFGHHEIWHLLVMAGSGCHFAFMVYHVV"
     gene            9009..>10123
                     /gene="aceB"
                     /locus_tag="VGQ24_07160"
     CDS             9009..>10123
                     /gene="aceB"
                     /locus_tag="VGQ24_07160"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004474 - malate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase A"
                     /protein_id="HEV8454651.1"
                     /translation="MSLEIRAPYIEETDRVVTPQALAFLELLARHFGPRRKALLRRRW
                     EVQRSMRGGNLPDFLDETKEIRERSWTVAPAPADLNDRRVEITGPVERKMMINALNSG
                     ARVFMADFEDALSPPWANVIAGQVNCAHAVRRTLEYTSPEGKRYQLGERLATLVVRPR
                     GWHLDEKHMLIDDEPMSASLFDFGLYFFHNAQELLARGRGPYFYLPKLEGHTEARLWN
                     EVFDLAQDALGIPRGTVRATVLIETILAAYQMDEILYELRDHAAGLNAGRWDYLFSII
                     KNFNDRPDFLLPDRSQLTMTIPFMRAYTELLVKTCHRRGAHAIGGMAAFIPSRRDPQV
                     NEIALAKVREDKVRESRDGFDGTWVAHPDLVTVAREP"
BASE COUNT         1741 a         3293 c         3223 g         1866 t
ORIGIN      
        1 tgaacgagaa cccgaccgat ggtgatgagc gtggcaccgt catctgcccc ggcccgggcg
       61 agaacagtgg catgtggttc gtcgtgttca cctaccgcgg cagcggctat gtcaaggacg
      121 atgagcgcga tgccatcaat gccgacaagc tgctcgcaca gctccggaag gggaacaaag
      181 ccggcaatga agagcgtcgc cgccatggct gggagacgct ggagctggat ggctgggagc
      241 ggccacccta ttacgacgag cgaaccaaca atctcacctg gggactgcgg ctcatcgatg
      301 catcgggcga caccaccatc aatcactcgg tccgtctgct cggtcgcggt ggggtgatgg
      361 aagtggatct cgtcgccgga ccgacgctcg cccaggcggc cgttccggac ttcgaaacga
      421 tgctcgccgg gttcacctat gtgcccggcc agcaatacgc cgagtggcgc gccggtgaca
      481 aggttgccgc ctatggcctg actgcgctgg ttgccggcgg cgcgggagcg ctcgccgcca
      541 agtccggaat cctggccaag ctgggcaaag gcgtcatcgc actcgtcgcg gccgctctgg
      601 ccggactcaa gtcgctcgcc acccgggtat ttggcaagaa gggcaacgcc accgcatgat
      661 ggacggcgcg gcggtggaca cgagcacaat gctcgtgctt gccgccatag cgctggctga
      721 aggtacgggg tgggtgccgg ccgggtccgt gatgcttcgg cgtttcttga gtggggcatg
      781 gcaaatcgag gaacccgccg gccccggcaa cagactgcga ctcgtccact ggtggccacc
      841 gtggaccgac acgctcgtgg tgccgccgag gtcgaacgga gctgtgcctc tcagccaggc
      901 cgacctggtc gcgaggatag cagctaccgc caccgtacgc accgccgccc gggctatcgg
      961 cgcggtgacg ctgaccctcc tggtcgtcgg cgtccccgcc ggttttggct tggccggagc
     1021 gatcgggggt ctgacagtac taggcagcgt ggccgccggc caaatcactc tgggactcct
     1081 cggctggcgt ggactcgcat ccctccgtgc tgctcgccgg gagcgtatgc gcctcctgac
     1141 cgcaagcctg aatccattca ccgcacctgc gctcgcgtcg aggctccttg cagccgcatg
     1201 cgccggagct accccggcga cggtagcacg tacacttctc tcgccggagc ggtgggcgag
     1261 ctggtttcgg ccccgcgcgt acgacgcggg cgtggcgcag aagctcgatg aagagctcgg
     1321 taaggatctc gaagctgctg acgacgcgat cgcgcaggtg ctggcggagc ggccaaagat
     1381 ggcgaggaat ggacgatggt gtcctcgttg cgccgcaacc taccatgccg gggcgacggc
     1441 gtgcgccgac tgcaacatcg atctgctgga ggcctcggag ggagtctatc ccacagcgcg
     1501 attccgacca gcgcagagcc tgagctagct ttcatgtcat gcctcgattg caaaccgccc
     1561 tcttcgatct cgacggaacc ctgatcgact cgatcaggct cattctcgac agctatcatc
     1621 acacgctgac ccagcacaac ctgccggcca gaacggatga ggattggctc atgggtgtcg
     1681 gcaccccctt gtcggtgcag ttctccgagt ggcgggaatc tcccgaagta ctcgaggcca
     1741 tgatcgcgac ctaccgggag tacaacctga agcaccacga cagtatggtg acggtctatc
     1801 ccggtgtgct cgaggcggtg cgggagatca aggcggcagg catccagact ggactcgtta
     1861 ccagcaagaa ccgcctgggc gcgctcaggg gtctccagct ggtcgggttc gaggcgctga
     1921 tggacgtgct ggtctgcgcc gacgaggtga ccaatcccaa accccacccg gagccggtgg
     1981 aaaaggccgt cgcgctgctc ggcgccgatc ctgcaagcac ggtgtacgtc ggcgacagca
     2041 tccacgacat gcactcaggg cgggcggcgg gcgtcaagac cgcggctgcg ctctgggggc
     2101 cgttcggaag ggggcatctg gagagtgcga gtccggatta ctggctggag tcgccgaggg
     2161 atctggttgc tttgctcatt cggcctccag tgcctcccgc agccgccgca tcagcgtgtc
     2221 caccgtaaac ggcttctcga caaacccggt ggcggggtgc atcgatgtat cgttggccaa
     2281 gggcctttcg gtgtagcccg acatgaaaac cgcacggagc gccgggttcc tgatccggag
     2341 ctgttcgacc agctcgtgac cacccatctc gggcatcacc aggtcggtca gcaccaggtc
     2401 gatggcttcg gggttgtcct cgtagatccg cagggcctct ctgccgttac cagcctcaat
     2461 cacacgatac ccatgccact cgagcagccg gcgcaccgac gaccgtacgg tggcctcgtc
     2521 ctcaacgagc aggagggtct ctgacccacc ctggggcacg tctctttcag ccgtactcag
     2581 agccggctcg gatcccgtgt acctcggcag gtagatcgtg aactcggagc cttgatccgg
     2641 ctggctttcc accacgatgt gcccgccgct ctgctcgatg atgccgaaga cggtcgacag
     2701 tccgagacca gtgccgctgg acccttgctt ggtggtgaag aatggctcaa agactcgagc
     2761 ctgggtggcg gcgtccatac cgctgccggt gtccttcact gcaatcgcga cgtacggagt
     2821 gtcccggagt tgggcgttgg cagtggtgat cgagactcgg ccgccacgag gcatggcgtc
     2881 gcgcgcattt gtgatcaggt tgaccaggac ctgctccatc tggccgggat ccaccgtcac
     2941 gttgccggcc tcgggggcga gcagcagatc gagcgccacg tcggtgccga gcaagcggct
     3001 aagcatcggc tcgagctccg tggcgagggc gttgagtgat accacccgcg gttgtaacac
     3061 ctgcctccgg ctgaacgcca gcagttgccg ggtcaaccca gcggctcgtt ggccggcgtg
     3121 ccggatctgc tcgatatcgg cccggagagg atcgctcggg cggagctcct ggaggatcag
     3181 ctcgctgtag gtcaaaattc cggtcagcag gttgttgaag tcgtgagcga ttcctccggc
     3241 gagccggcca accgcgtcca tcttgtccgc ctgccgctcc tcctcttccc gctgagagcc
     3301 ggcctcctcc tccgcccgct tcccggtaac atcctcgctg aggttgaggg cgcctaccgt
     3361 ctggccttcc gcgtcccgaa tcggcagggc ggagttgacg atggtcttct ggcctcctcc
     3421 aggaatgtca atggttattt cctggttgag tacgctctct ccgctctcga gagcctgcgc
     3481 gacaccccac tcgttcggct ggaacggctg gccgctggct gcccagcggc tgttataggc
     3541 ggggagttgg tcgagctcca agtaacgcac cgggccccag atctcccggc tcgcgatatt
     3601 gtccagcacg atccggcctt gccggtccac aatccagacg ccggtgggca gcgcgtcgag
     3661 cacctggtga agccgccgct ccgaccgccg cccctcagtg aggtcggcca tggcgctgac
     3721 cacccggacc ggcgcgtcgg tctcgtcgtg aacgatgcgg gcccgatcct gcacgtcggc
     3781 ataggagcca tcggcgcggc ggaagcggta ctcctcggac cagaccgtct caccctgtct
     3841 gatcgctgag tccagacttc ccaccacgcg ctcacggtct tcgggatgca gccgctcgta
     3901 ccaccagtcc gctgtggccc cgagctcggc cggctgatag tccagcaggg gcccggttcc
     3961 ttcgtcccag accacctcat cggtgagcag gtcccagtcc cacaccactt ccttcgaagc
     4021 ttgggcgacg aatcggtacc gctcttcgct ggctcggagc gccgcttccg cctgcttccg
     4081 ctcggtaatg tcctgaatcg ccgcgatgag gtgcgtcggc tttccctcgg cgtcagtgac
     4141 gagagacacg tttaccaacg cccagagcac ctcaccggac cgggtcaggt agcgcttctc
     4201 caccgtgtac gtgcgacatt cgccggtcag caggaggcga atggcctcac ggtcggccgg
     4261 cacgtcgtca gggtgggtgc gagcttcagc ggagaacccg actaggtcgt cgggggcgct
     4321 gccgagcagg tcacagaggg cctgattcac ccggagccag cgtccatcgg gtgacatgac
     4381 ggccatccct attcccgact gctcgaaggt gctgtagaac tgctcatcgc tgtctcggcg
     4441 gccctgctct gcctggcgcc gccaagccat ctcgcggcga agctcgatct cggtcaccac
     4501 cgacgctgca agatctttca gtagtgctat atcgcgctct gaccacagtc gcggcatctt
     4561 gtcgacaacg ctgaagcttc caaccgtctg tccatcgcgg gtaaccagcg gtacaccggc
     4621 gtaggccacc cagccgagct cccggatggc tgtgctgtgg cgcaggaggg gatggcgccg
     4681 ggcgtcctcg actacgagct gctcgccggt ggagaccacc tgggcgtcga aggaaaatga
     4741 gagcggggct gcgcgccggc tggcccacgg ctccggtaag cctatggcgc tcttgaagaa
     4801 ctgacggtct tccgagatga gtgagatcag tgcgacgggc gtgcccaaca gccgcgaggc
     4861 catccgggtc aggcgatcga aaccttcttc cggcggggta tccagaaggg cagtatggcg
     4921 cagggcggcc agccggtcgg ggcgggtgag cagactatag gtcatcgaac cgcgccaccc
     4981 atattcacgc cgggcccgta gttggcactt cgtggttcag tttggtggtc cactttgggg
     5041 cggatcaggg agccccggag tggtttttaa ggggagaacc tacagtgcgg gacgcagtct
     5101 gcaattggtg taccggctac ttaccacccc tcgggtttct ggctcgtcac ctccacgtcg
     5161 tcggacaaga cgccttggac cttccaaggg gtgacgatcc agaggtaccc gtccaccggt
     5221 cattcttccc acctcctggc cagcctccag agcacaaaac cttgccaagt ctgtggtgtg
     5281 ggctattttc cggccgcttt ctcccatcac ccaggttctt ccaatgcgac tcctcccccg
     5341 cgatgaaaag ttctttgacc tcttcacctc ggtcgcgtcg ctgagcgtag aggcagccaa
     5401 gctccagctt gacttgctca aagccgacgg actgcaccgc cctgcgattg tcgatgcgat
     5461 caagcgcctc gagcacgaag cggatcaagt gacgcatgag gtggtcaccc ggctggaccg
     5521 cgtcttcatc acccccctgg accgagagga cattcacctg ctcgcctccc gcctcgacga
     5581 cgtgatggac ctgatcgacg ggaccgcgca ccgggtgcag atgtaccacg cgggcgaggc
     5641 gccggccggc gcgatgctcc tggccgaggt ggtcctgcgg gccactgagt cacttctggt
     5701 ggcggtgcag gcactggaga agaacaagag cggcgtcgtg ctcgaggcgt gcgcccaggt
     5761 caagcggctg gaagaggagg gtgattcggt gtaccacgag tgggtggccc ggctgttcga
     5821 cgggcgcccg gatgcgctcg tggtcatcaa gtggaaggag atctacgata ccctggagaa
     5881 gaccctcgac cacatggagg atgcgggaaa cgtgctggaa tccatctcca tcaagcacgg
     5941 ctgagcatgg accagaacgt cacgtacatc ctgatgatcg tggcggtggc gctcatattc
     6001 gatttcatca acgggttcca cgacagcgcc aactcgattg ccacagtcgt ctcgacccgg
     6061 gtcctgagcc caccggtcgc ggtagtctgg gccgcgttct tcaacttcgt ggcggcattt
     6121 gtggtcggca cggcggtagc gaagacgatc gggaagggac tcatcgatgt cagcgtcgtc
     6181 gatccgaatg tgattctagg cggactcctc ggggccatcg cgtgggatgt catcacctgg
     6241 tatctcggcc tgcccagctc ctcctctcac gcactgctgg gaggctatgc cggtgccgcg
     6301 atcgcgaagg ctggttttgg cgccctgatc ctgagtgggt ggatcctccc catcgctttt
     6361 atcgtgattt cgcccctgct tggaatggtc atcgcactca tcctcactgt cggcctatcc
     6421 tggctgttgc ggggggcacc cccaggacca ctcgatcgga tctttcgccg cctccaattg
     6481 ctctccgccg gcctctactc actgagccac ggggccaacg atgcccagaa gaccatggga
     6541 atcatcgtca gccttctggt ggcgagtcag gccgacttcg cccaccaggc agggtggctc
     6601 aggcacctgt accttccttc agctgaccac atcccgctct ggatcatcct cgcggcgcac
     6661 gccgcgatcg cgctctgcac ggctgctggc tgatggcgaa tcgtcaagac catgggcatg
     6721 cggataaccc ggctccgccc gttcggcggc ttctgcgcgg agacctcagg cggcatcacg
     6781 ctcttgttcg catcgcatct aggcgtaccg gtgagcacga cgcacacgat tactggggcc
     6841 atcgtaggcg tcggcgcggc gcaacggctg tccgcggtgc gatggggagt cgccaggcgt
     6901 atcgtgtggg cctggatcct caccatgcca atgagcgccg tcattgcggc gttatcgtat
     6961 ttgattttga gtaagaagat tgggatttga acagtcacga gtcgcgagtc gcgaatgcgt
     7021 cgcccacgcc ttacgccgcc cgcaccatcc gtcgactctc gattgcgtcg cgatagtcct
     7081 cgagcagccg atcgtacact tcatcccacc ctcgctctcc cgcggtccgg agcgcgcctt
     7141 ccgacaacct gcgccgcaag gcggggtcct cgatgagccg gcggaggccg tgggcgatgg
     7201 cccccgtgct gttcggagca accagccagg cgttctcccc atgcttcgcg aactcgagca
     7261 cccctcccgc cgccgccacc agtgacggca gacccgatcc catcgcctcg agcagcgagt
     7321 tgccgaaggt ctcggtggcg gagggaaagg cgaagatgtc tgccgaggag taggcggccg
     7381 acaactcgag tccgtgcatc aggccggtca cgtgcacgcc ggggatttct cgccgccgga
     7441 tctcctcctc gagaggtccc cgtccaacca gggccagctt tgccgagccg cgatagggag
     7501 ccaacgcgtc ccaggcctcc agcaggaggg tgaggttttt ctcccgggca atccgaccga
     7561 tataggtgac gaggaggtca ttggggccga ggcccagcgc tcggcgatac ccttcactcc
     7621 ggaaacgtgg atggaagaac gccggatcca ccccccggct ccagacaccg gtgtgggtga
     7681 cgccacggct gtggagatgc tcctcgtaga tccgcgatgg gcataggacc gtgtgcgcct
     7741 ggccgtagaa ccaccgcagg tagtgccaac cggcccgtag tgcccagtcc accccatacc
     7801 gcgtggcgta tttgtcgtag tcggtatggg cggaggccac gagtggaagc cccaggcggc
     7861 gcgcagcctt gagccccgcc aggccgagcg cgaactcggt ggctacgtgc accacgtccg
     7921 gccggaatct tccggcgtcc tcgatgacat cacggagccg gggaaaggcc cactggacgt
     7981 cctgatacaa gaagagggga atgctgggcg accggtgcac ctcgggccgg tcggtctcgc
     8041 ccctcggcag cgggtatgtg gccgagtaga cccgcacctg atggccacga tcctccagtg
     8101 cccgggtgag ccggagcagc gtgactccca caccgctcac catgggccag tagacctcgg
     8161 aaaacagggc tattcgcatg ctgctaaggc tacggtgacc ttcgttaggc gacaagtctg
     8221 gggcgctatt ggctatgcgc catgggctag tggctgatct ggttcgagag ccgctccgcg
     8281 ctctattcgg aggctttcat ctgggtcgga ccagcgcata gccaacggcg aatagcccat
     8341 agccaatagc caatagccca tggcagattc cggcatgcgc atccgtgagc cgttcaatgg
     8401 agtgtcccat ctggttggtc tcgcactggc gtgcgccggt acctgggctc tgctccgatg
     8461 ggcaaatggt ccttgggaga cggcggcatt cacgatctat ggcggcaccc tcatcctgtt
     8521 atacagcatc agctttctat atcactccct gccggtcgca gggcggccac tcagggcgct
     8581 tcgaactctc gatcatatcg cgatctactt cctgattgcc gggacgtaca ccccggtcgc
     8641 gttgatcacg ctgcataacc gactgggctg gagcctgctc gccgcagtct ggctgatcgc
     8701 cctggccggc attccattca agctcctcta cttagatgct ccggtctggc tttcgaccgg
     8761 tacctacctc gcgatgggat acctggcact cgtcgccatt gtgccgcttg cgcaggctgt
     8821 atcgctcagc gggctgctct ggctggtcgc cggcggtgcg gcatacacgg tgggagccgt
     8881 ggtctactca caccggcgcc ccgatccatt tcccggtcgg ttcggtcatc acgagatctg
     8941 gcacctgctg gtgatggccg gcagcggatg tcacttcgcg ttcatggtct accacgtcgt
     9001 gtgaggcaat gagcctggaa attcgtgcac cgtacatcga ggagaccgac cgcgtcgtca
     9061 cgccgcaagc gctcgccttc ctcgagctac tggcccgaca cttcgggccc cggcggaagg
     9121 cgctgctgcg ccggcggtgg gaggttcagc gctcgatgcg aggcggcaac ctgccggact
     9181 tcctggatga gaccaaagag atccgcgagc ggagctggac ggtggcaccg gctccggccg
     9241 acctgaacga ccggcgggtc gagatcaccg ggccggtcga acggaagatg atgatcaacg
     9301 ccctgaactc gggggccagg gtctttatgg cggacttcga ggatgcgctg tcgcctccct
     9361 gggccaatgt catcgccgga caggtgaatt gcgcccacgc cgtgcggcgt accctcgaat
     9421 acaccagccc ggaagggaag cgttatcaac tgggggagcg gctcgcgacc ctcgtggtca
     9481 ggccccgtgg ctggcacctg gatgagaagc acatgttgat cgatgacgag cctatgtcag
     9541 ccagcctctt cgacttcggc ctctattttt tccacaacgc acaggagctg ctggcacgtg
     9601 gtcgtggacc atacttctat cttccaaagc tagagggcca taccgaggca cggctctgga
     9661 acgaggtgtt cgacctggcc caggatgcgc tcggaatccc ccgaggaacc gtccgggcca
     9721 ccgtcctcat cgaaacgatc ctggccgcct accagatgga cgagatcctc tacgagctca
     9781 gagatcacgc ggccgggctc aatgccggcc ggtgggacta cctgttcagc atcatcaaga
     9841 atttcaacga ccgccccgac tttcttctcc ccgaccgctc ccagctcacg atgaccatcc
     9901 ccttcatgcg ggcctatacc gagctgctgg tgaagacctg ccatcgaagg ggagcgcacg
     9961 cgatcggagg aatggccgcg ttcatcccca gccggcgaga cccccaggtc aacgagatcg
    10021 ccctggccaa ggtccgggag gacaaggtgc gggagtcgcg ggacgggttc gatggcacct
    10081 gggtggccca tcccgatctg gtcacggtgg cccgcgagcc ctt
//
LOCUS       DASYRV010000276         3688 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2548106, whole genome shotgun sequence.
ACCESSION   DASYRV010000276 DASYRV010000000
VERSION     DASYRV010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3688
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2548106"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(32..469)
                     /locus_tag="VGQ24_07165"
     CDS             complement(32..469)
                     /locus_tag="VGQ24_07165"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEV8454652.1"
                     /translation="MAGGGGGDARGALTSEPNVVPMIDILLVLLIIFMITQPLSRMAL
                     DVQVPPQDTPVTSKTPPSQIVLELFDDGGYAINGQPVPKDQLDTQMHAIYDQRPAKLL
                     FIKAGGNRIYQDVIEAMDVARGAGVQIIGFTPREAEKRQGASQ"
     gene            complement(471..923)
                     /locus_tag="VGQ24_07170"
     CDS             complement(471..923)
                     /locus_tag="VGQ24_07170"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEV8454653.1"
                     /translation="MAVTVGKAGQTTVKSEPNVVPMIDIMLVLLIIFMIVTPLIAAGF
                     KATLPKGQNLDPRPEGENEVVLGIDQAGRYFLNQRPIASGALEDQLRSIFAARTEDKI
                     LYFKADNQLKYAKVQEAVETARKAGVRVMAAITEPKSTGLFVTKKTEN"
     gene            complement(966..1715)
                     /locus_tag="VGQ24_07175"
     CDS             complement(966..1715)
                     /locus_tag="VGQ24_07175"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEV8454654.1"
                     /translation="MSVDLLQLWGQMGYFAKGVVVILAIMSIWSLTIMIQKFIQFQRA
                     QRETRKFAPQFSRAIQEENLDQAIALAEKSKKSHVAHVVGEALTEVKPLLRDRATITA
                     ADINSAERAVERQMLITLADFKRGIGILATVGSTAPFVGLLGTTMGIVNAFTGMAAQG
                     ASGGLAGISAGIAEALITTAFGLLVAIPAVWAYNYFTTKIENLTVEMTYTSKELIDYL
                     IKSVGSEFGRSIFTKEFQAQKAVTGSGHVHG"
     gene            complement(1737..2438)
                     /locus_tag="VGQ24_07180"
     CDS             complement(1737..2438)
                     /locus_tag="VGQ24_07180"
                     /inference="COORDINATES: protein motif:HMM:TIGR01352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HEV8454655.1"
                     /translation="MFENLIESKQKHQRTLGQTVLSVVLHVLLIVGAVKATQGVAETI
                     KNRPVDTTMVFLKPPEPPKPPPDQPPPDVVVAANPPPKGFQTVIAPTDIPKDIPPIDL
                     SEKPFDPRDFTGKGVEGGVGTGVVGGTGPVTGEVFLEAQIDDPVQPISIPLPRYPPVL
                     QSAGISGSVDLQYVVDTTGHAEPNSFKVMKSSHPAFSEPAQEAIRKGVFKPARLKGRP
                     VRQLVQQRISFKVGQ"
     gene            complement(2828..>3688)
                     /locus_tag="VGQ24_07185"
     CDS             complement(2828..>3688)
                     /locus_tag="VGQ24_07185"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEV8454656.1"
                     /translation="GTSMRPVEGIMDEVDAISDGRSLHRRLAVPLSGDEMARLALTVN
                     GMLARLEQSFASLHRFTADASHELKTPLMVLRAGVERALVHPGVPSEILQSLDETLAQ
                     INQMTEMVENLLTLARADEGRAPLAVEECDLRDLVADVAETAGILGEEAGVSAVHTMP
                     ETPVRLAVDRHRLREMLLNMVTNAIKYTPRGGAVALSLEEKDDAVLFTVRDTGIGIAA
                     GDLPHIFERFWRADPARSRTGDRPGIGLGLAITKWIVEAHGGSITVQSRPGRGPMFTV
                     RLPKPRFQAA"
BASE COUNT          616 a         1187 c         1186 g          699 t
ORIGIN      
        1 ggtaagactg taaggcgcaa cgcgtgcgcc cctactggct ggctccctgg cgcttctccg
       61 cttcccgggg ggtgaacccg atgatctgca ctccggcgcc ccgagcaacg tccatggcct
      121 cgatcacgtc ctggtagatc cggttgcccc cggccttgat gaagagcagt ttggccgggc
      181 gctggtcgta gatggcgtgc atctgggtgt ccagttgatc cttgggaacc ggctggccgt
      241 tgatggcata cccgccgtcg tcgaacagct ccagcacgat ctggctcggc ggggtcttgc
      301 tggtgacggg cgtgtcctgc ggcggcacct ggacgtcgag cgccatccgc gagagcggct
      361 gcgtgatcat gaagatgatc aggagcacca gcagaatgtc gatcatcggg accacattgg
      421 gctctgacgt gagagccccg cgggcatctc cgcctcctcc accggccata tcagttctcc
      481 gtcttcttgg tgacgaacag gccggtgctc ttgggctcgg tgatggcggc catcacccgt
      541 acacccgcct tccgcgccgt ctcgacggct tcctgcacct tggcgtactt gagctgattg
      601 tccgccttga agtaaaggat cttgtcttcg gtcctcgcgg caaagatcga gcggagctgg
      661 tcctccagcg cgccgctcgc aatgggacgc tggttgagga agtagcgccc cgcctgatcg
      721 atgccgagca ccacttcgtt ctcgccctcc ggccggggat cgaggttctg gcccttgggc
      781 agggtggcct tgaaccccgc ggcgatcaat ggggtcacga tcatgaagat gatcaacagc
      841 accagcatga tgtcgatcat cggtaccacg ttcggctcgg acttgaccgt ggtctgtcct
      901 gccttgccga cggtgactgc catagccgtt acctcctagc cggcgtgacc ggcgccaaac
      961 tgcgcttagc catgcacgtg cccgctgccg gtgacggcct tctgcgcctg gaattccttg
     1021 gtgaagatcg agcgcccgaa ctcgctcccc acgctcttga tcagatagtc gatcagctct
     1081 ttcgaggtgt aggtcatctc gaccgtaagg ttctcgatct tggtcgtgaa gtagttgtac
     1141 gcccacaccg ccgggatggc gaccagcagg ccgaaggccg tcgtgatcag cgcctcggcg
     1201 ataccggccg agatgcccgc caggccgccg gacgcaccct gcgccgccat gccggtgaat
     1261 gcattgacga tgcccatcgt ggtgccgagg aggccgacga acggcgcggt ggaacccacg
     1321 gtcgccagaa tgccgatgcc gcgcttgaag tcggcgaggg tgatcagcat ctgccgctcg
     1381 accgcccgct cggccgagtt gatgtcggca gctgtaatcg tagcgcgatc gcggaggagg
     1441 ggtttcacct ccgtgagcgc ctcgccaacc acgtgggcga cgtggctctt cttgctcttc
     1501 tcggccaggg cgatggcctg atccaggttc tcctcctgaa tggcgcggga gaactgcggg
     1561 gcgaactttc gggtctcgcg ctgggcgcgt tggaactgaa tgaacttctg gatcatgatg
     1621 gtgagcgacc agatggacat gatggccagg atgacgacga cgcccttggc gaaatacccc
     1681 atctgacccc aaagctgaag aagatctacg ctcatgttgt agtgcctcca gggggactat
     1741 tgaccgacct tgaatgaaat tcgctgctgc accagctgcc gcaccggtcg gccttttagc
     1801 ctcgccggct tgaacacgcc cttgcggatg gcctcctgcg ccggctcgga aaaggccggg
     1861 tgagaggact tcatcacctt gaaggagttc ggttcggcgt gcccggttgt gtcgaccacg
     1921 tactggagat ccaccgaccc ggagatcccg gcgctttgca gcaccggcgg atagcgaggg
     1981 agggggatcg agatcggctg caccggatca tcgatctgag cctccaggaa gacctcgccc
     2041 gtaaccggcc cggttccgcc cacaacacca gtaccgaccc cgccttccac ccccttaccg
     2101 gtaaagtccc gggggtcgaa tggcttctcg ctgaggtcga tcggcggaat gtccttcggg
     2161 atgtcggtcg gcgcgatgac ggtctggaac cccttcggcg gggggttggc ggcaacgacg
     2221 acatcgggcg ggggctggtc cggcggaggc ttgggtggct caggcggctt caggaagacc
     2281 atcgtagtgt caaccggacg gttcttgata gtctcggcga cgccctgggt cgccttcacc
     2341 gcgcccacga tcagcaggac gtgaagcacc accgacaaga ctgtctgccc cagcgtgcgc
     2401 tgatgcttct gcttcgattc gatcaggttt tcgaacacgc tactacctcc agggggaggg
     2461 tgatcgtgcc ccgaaagtaa ggcgggccgg ctacatcctg tttgccatta gatgacaatt
     2521 cgattacaac cggattagcg ggtcctgaat cgaattgttt gacgcaccaa cactgccgcc
     2581 ggccggccag cccgcgtgcc ggtttgaaac tggcgccgag cacggcttca atactcgaca
     2641 gtgcgaacgc ggagtctgtg gtggcgatca cccgaaccga gccggtgtcg gcctggccag
     2701 tcagggcgat aacgtactcc agctttacct cgcccgtaag gagcgacgcg gcgctcttgc
     2761 tacctagcac cgctctggag ctgtcgtgaa gctgatatga cacaacgatg aattgggagt
     2821 gagagctcta cgccgcctgg aatcgaggct tcggtaaccg gacggtgaac atcggtcccc
     2881 ggccgggccg gctctgcacc gtgatcgatc ccccgtgggc ctccacgatc cacttggtga
     2941 tcgccaggcc caggccgatc ccgggccggt cgccggttcg cgatcgggcg gggtcggcgc
     3001 gccagaaccg ttcgaaaatg tggggcaggt cgccggccgc gatgccgatg ccggtgtcgc
     3061 gaaccgtgaa gaggacggcg tcgtccttct cctccaggct cagcgccacc gctccacccc
     3121 gcggggtgta cttgatggca ttggtcacca tgttgagcag catctcccgg aggcggtgac
     3181 ggtccaccgc cagacgtacc ggagtctccg gcatcgtgtg caccgcgctg acgcccgcct
     3241 cctcccccag gatcccggcg gtctccgcca cgtcggcgac caggtcgcgg aggtcgcatt
     3301 cctccaccgc gagcggcgcc cggccctcgt cggctcgggc gagggtgaga aggttttcca
     3361 ccatctcggt catctgattg atctgggcca gcgtctcgtc gagtgactgg aggatctccg
     3421 aggggacgcc gggatgcacc agtgcccgct ccactccggc ccgcagcacc atcagcgggg
     3481 tcttgagctc gtggcttgcg tcggcggtga accggtgcag gctggcaaag ctctgctcca
     3541 gccgggcgag catgccgttc accgtcaggg ccaggcgagc catctcgtcg cccgagagcg
     3601 gcaccgccaa ccgacggtgg agactgcggc cgtccgagat cgcgtcgacc tcgtccatga
     3661 tcccctcgac cggtcgcatg ctggtgcc
//
LOCUS       DASYRV010000277         3934 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_521983, whole genome shotgun sequence.
ACCESSION   DASYRV010000277 DASYRV010000000
VERSION     DASYRV010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3934
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_521983"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="VGQ24_07190"
     CDS             complement(<1..219)
                     /locus_tag="VGQ24_07190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454657.1"
                     /translation="MSWVSTPRAGYAVGDPGLFSFLGKVAGAVVGSIPGVSTVAKVAG
                     TLVNAITNKRPAPAGPAMAMPVSALGGFG"
     gene            complement(216..470)
                     /locus_tag="VGQ24_07195"
     CDS             complement(216..470)
                     /locus_tag="VGQ24_07195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454658.1"
                     /translation="MVLRTKVAELEQQWSDVQDWLARWTARENARKRRAVKAAMGEEE
                     SQGSNTAAGGEIVDPGATQAQGVSRKAYLRSLVHQNGGRR"
     gene            complement(1020..1409)
                     /locus_tag="VGQ24_07200"
     CDS             complement(1020..1409)
                     /locus_tag="VGQ24_07200"
                     /inference="COORDINATES: protein motif:HMM:NF014600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HEV8454659.1"
                     /translation="MSLSGLNVGLLPAAQEALALGKEYGLDITVTSVYRTLTEQMQLR
                     RRYEQCVARGEFQKPTAQRSAACRYPANRPGDSAHNWGLAWDSWVPADQMDLWTRIRE
                     YLGWHVPANDLVHAELPDWRSYVRASG"
     gene            complement(1406..2104)
                     /locus_tag="VGQ24_07205"
     CDS             complement(1406..2104)
                     /locus_tag="VGQ24_07205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454660.1"
                     /translation="MQPIQIGEQQSRLRRLTNTVGQQTLVLEEVASPIIVLDSIAGPP
                     WRSDPRRLGGFQSIAPAAIAGGNGRVILVFPSTGMTDGAFVVRQIDLMIGGLSTNVRI
                     DNNVQLGLRLHVAQMTTPIATAPNLFSMEPVGSAVAGGIGLNLTAQTGAAGITNERQV
                     GQWVRAGNTSADQDAITVHFRDLDILLVPMAKSDGVQFAVIGEASGTSSAGVNNVGCA
                     MAVRGDLYQRYPLR"
     gene            complement(2104..2433)
                     /locus_tag="VGQ24_07210"
     CDS             complement(2104..2433)
                     /locus_tag="VGQ24_07210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454661.1"
                     /translation="MRVTSTNVAALSTTFPLQGQQYEFLKWPARVQFAIVASAAGIVA
                     TVYRGSDLLQQRGPAVVKTTPTVYPDDFFLDDVADAGERLSVELNETANIATTDIETT
                     VIITPLG"
     gene            complement(2578..2850)
                     /locus_tag="VGQ24_07215"
     CDS             complement(2578..2850)
                     /locus_tag="VGQ24_07215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454662.1"
                     /translation="MSTQQALWEFGELRRDLHRAANLGQRLEIALGRLVAPPRGVASA
                     QAELVGCGLDDLVEELGQTLVQCGADLGKIERCLAQAAAIRRTGST"
     gene            complement(2847..3521)
                     /locus_tag="VGQ24_07220"
     CDS             complement(2847..3521)
                     /locus_tag="VGQ24_07220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454663.1"
                     /translation="MSWVSTPRAGYAVGDPGLFSFLGKVAGAVVGSIPGVSTVAKVAG
                     TLVNAITNKRPAPAGPAMAMPVSALGGFGRALTAQPRGPLLPAPIAMPGGAIVRADSV
                     KVQTGSKIGPGGSLFTGPSTTTFYGPQTTPGAPTGSQVCGDGRVRATHSNKSGYHLKD
                     GTYIAPGTRCVANRRRNPLNPRALSRAMSRVAGAQKAVRSLIRFESVSRGGKLVMKRP
                     GGRRKR"
     gene            complement(3518..3853)
                     /locus_tag="VGQ24_07225"
     CDS             complement(3518..3853)
                     /locus_tag="VGQ24_07225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454664.1"
                     /translation="MIRKLLRWLIGWQETAENRPEPLEAQVAILKTKVAELEMQWSDV
                     QDWLHRWTARENARKRKAVKVAMGEEETQGSNTAAGGEIVDPGATQAQGVSRKAYLRS
                     LVHQNGGRR"
BASE COUNT          651 a         1337 c         1262 g          684 t
ORIGIN      
        1 gccgaatccg ccgagagcag ataccggcat cgccattgcc ggcccggcgg gcgccggccg
       61 cttgttggtg atcgcgttca cgagagtgcc cgcgaccttt gcgacggtcg agaccccagg
      121 aatggagccc acgaccgcac ccgcaacttt cccgagaaaa ctgaacaggc cagggtcgcc
      181 gactgcgtag cccgcccgtg gcgtagagac ccaactcatc gtctgccccc gttctggtgg
      241 accagcgacc gcaagtaggc tttccggctc actccctgcg cctgggtggc cccaggatcg
      301 acgatctccc ccccggccgc agtgttggac ccctgactct cctcctcgcc catggccgcc
      361 ttcaccgccc gccgcttgcg ggcgttctct cgcgcggtcc accgggcaag ccagtcctgc
      421 acgtccgacc attgctgctc gagctccgcc accttggtcc gtaggaccac gacttgcgcc
      481 tccaggggct caggggcgtt cgcagcaggt tcctgccagc caataagcca ccgaaggagc
      541 ttacggatca ccttgtggca ccttcggcta ggggggcgga gtgcagaaaa tggtcagtga
      601 gacggttgcg aaactacttg aaggtgtcaa gtccctgtgt ggacaaatgc aattccgact
      661 aaaatggtcg ggattctttt gcctggggtt ggtttataac cccggccccc gtaggtccca
      721 gcgtagcgac cagtagtaag cccttggtgt ggataagttt agtggatact cgggcaggag
      781 cgccccaggc gcggcaatgc gcgccgccga tggccctggc taccctccga agctcggcta
      841 cttcgctccc caccgcggcc gggaccgcgg tctccgacag gtcggcgccg tttctctgta
      901 gttcgagcgg cagccgatga cgtataagat atgttacgtc aacgacttac gcgtttttca
      961 gtgaaagagg tgccacagca agaggatcag aatcacgagc acaatgaaca attcggccgt
     1021 cacccgctgg ccctcacgta gctgcgccag tcgggtagct cggcgtgaac taagtcgttg
     1081 gcgggcacgt gccagccaag gtactcgcgg atgcgggtcc acaaatccat ctggtcggcg
     1141 ggcacccagg agtcccacgc gagcccccag ttatgagcgc tgtcgcccgg tcggttagcg
     1201 ggataccggc aggcggcact ccgctgggcc gtgggcttct ggaactcgcc gcgcgcaaca
     1261 cactgctcat agcggcggcg aagctgcatt tgctcggtga gagtccgata gaccgacgtg
     1321 accgtgatgt cgagcccgta ctccttgccg agcgccagag cttcttgggc cgccggcagg
     1381 agtcccacgt tcaaaccgga gaggctcacc gcagcgggta ccgctggtag aggtcgccgc
     1441 gcaccgccat ggcgcagccg acgttgttga cgccagcgct cgaggttccg ctggcttcac
     1501 cgatcaccgc gaactggacc ccatcagact tcgccatcgg caccagcaga atgtcgaggt
     1561 cccggaagtg gaccgtgata gcgtcctgat cggcgctcgt gttgcccgcg cggacccatt
     1621 gcccgacctg gcgctcgttg gtgatgccgg ccgcgccggt ctgagccgtg aggttgagcc
     1681 cgatcccgcc ggcgacggcg gaccccaccg gctccatgct gaacaggttg ggcgcggtcg
     1741 ctatcggcgt ggtcatctgc gcgacgtgga gccggaggcc aagctggacg ttgttgtcga
     1801 tccggacgtt ggtggagagc ccgccgatca tgaggtcgat ctgacggacg acgaaggcgc
     1861 catcggtcat gcccgtgctc ggaaagacca gaatcacccg accgttgccg cccgcgatgg
     1921 cggcgggcgc tatcgactgg aagccaccga gccggcgtgg gtcgctgcgc cagggtggcc
     1981 ctgcgatgct gtcgaggacg atgatcgggg aggcgacttc ctcgagcacc agggtttgtt
     2041 ggcccacggt gttcgtgagc cggcggagcc gagactgctg ctcgccaatc tgaatcggct
     2101 gcatcagccg agcggcgtga tgatgaccgt ggtctcgatg tccgtcgtcg cgatgttggc
     2161 ggtctcgttg agctctaccg aaagccgctc gccggcgtcg gcgacatcat cgagaaagaa
     2221 gtcgtccggg tacaccgtgg gcgtggtctt gaccacggcc ggcccgcgct gctgcaacag
     2281 atcggagccg cggtagaccg tggccacgat gccggccgca ctcgcgacga tggcgaattg
     2341 gacacgggcg ggccatttca aaaactcgta ctgctggcct tgcaagggga acgtggtcga
     2401 gagcgcggcc acgttggtgc tagttaccct catcgtcggc acagtcgcct ccctctcgtt
     2461 cccagaagta agcctgctca tcctgctcca tgtccgacag ccacccgcgg tcgttctcct
     2521 ggcacacgca acaccgctta cagcagccgc ggccgctctg ccgggcgtcg cagccgttca
     2581 ggtggaacct gtccgccgga tcgccgcagc ttgtgcaagg catcgctcga tcttccccag
     2641 gtcggcccca cactgcacca gcgtctgccc gagctcctcc accaggtcat cgagcccgca
     2701 ccctaccaac tccgcttgcg ccgaagccac gccgcgaggc ggtgcaacca ggcgcccaag
     2761 agcgatctca agccgttgcc cgagattcgc ggcacggtgc aggtcgcggc gaagctcgcc
     2821 gaactcccag agcgcctgct gcgtgctcac cgcttccgtc gcccgccggg ccgcttcatc
     2881 acgagcttcc cgccacggct cacggattca aaccggatca gcgaccgcac cgccttctgg
     2941 gcgccggcca cgcgcgacat cgcccgcgag agcgcgcgcg ggttcagcgg gttccgccgg
     3001 cggttcgcca cgcaccgagt gcccggtgcg atgtaggtgc cgtctttcag gtggtagccg
     3061 ctcttgttcg agtgggtggc ccgcacccgg ccgtccccgc acacttgcga gccggtgggc
     3121 gcgccgggcg tggtctgcgg gccatagaac gtggtggtcg aggggccggt gaacagcgag
     3181 ccgccgggac cgatcttgct cccggtctgc accttcaccg aatcagcccg cacgatggcg
     3241 ccgccgggca tggcaatcgg ggcagggagg agcggccccc gaggttgagc cgtgagcgcg
     3301 cggccgaatc cgccgagagc agataccggc atcgccattg ccggcccggc gggcgccggc
     3361 cgcttgttgg tgatcgcgtt cacgagagtg cccgcgacct ttgcgacggt cgacacccca
     3421 ggaatggagc ccacgaccgc accggcaact ttcccgagaa agctgaacag gccagggtcg
     3481 ccgactgcgt agccggcccg aggcgttgag acccaactca tcgacgaccc ccattctggt
     3541 ggaccagcga ccgcaagtag gctttccggc tcactccctg cgcctgggtg gccccaggat
     3601 cgacgatctc ccccccggcc gcagtgttgg acccctgcgt ctcctcctcg cccatggcca
     3661 ccttcacggc cttccgcttc cgggcgttct ctctcgcggt ccaccggtgg agccagtcct
     3721 ggacgtcgct ccactgcatc tcgagctcgg ccaccttggt ctttaggatc gcgacttgcg
     3781 cctccagcgg ctcaggccgg ttttcagcgg tttcctgcca gccaatgagc caccgaagga
     3841 gcttacggat caccttgtgg caccttcggc taggggggcg gagtgcagaa aatggtcagt
     3901 gagacggttg cgaaactact tgaaggtgtc aagt
//
LOCUS       DASYRV010000278         2531 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1769136, whole genome shotgun sequence.
ACCESSION   DASYRV010000278 DASYRV010000000
VERSION     DASYRV010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2531
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1769136"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..329)
                     /locus_tag="VGQ24_07230"
     CDS             complement(<1..329)
                     /locus_tag="VGQ24_07230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454665.1"
                     /translation="MATVGYEGVVIAGVGQTRYEKRTEKTIQQVLWEALDAALSSARF
                     PMRRVDGLAVTAFVLPPDNVTIVAEHFGLEPRWLSQGAYGGASGIIGMLQGARAIQAG
                     DADIVACL"
     gene            complement(345..1571)
                     /locus_tag="VGQ24_07235"
     CDS             complement(345..1571)
                     /locus_tag="VGQ24_07235"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEV8454666.1"
                     /translation="MGPSIEPRNGAEGPLKGLRVVDAGTMIAGPLATTLLADFGADVI
                     KLEQPGIGDPMRHWTPVKDDRSLWWKVIARNKRLITLNLSVPKGQELLRRLIVNADIL
                     VENYRPGTFERWGLGYDVLSAINPRLVFVRVSGYGQSGPYRHRGGYGTIAEAFSGVPS
                     FTGFPDKPPTLPGFPMADSVAATFSAMAAIFAVYNRDHHEPHHGQEIDVSLYEPLFRL
                     AEAQVIGFDQMGLVKQRRGNRMEEDSPRNTYQTRDETWIAISASSQKTFERLVHAMGR
                     DDLATDQRFTDNVRRVANADVLDKIMADWFATQESSEVLALFDRENVVAGLIHDIRDI
                     FKDPHYAARGNIVEVEDRDFGIVRMQGVVPRVLGTPGKVRHAGGQIGQDNSAVYLGDL
                     GVDADEFARLQADRVI"
     gene            complement(1575..2351)
                     /locus_tag="VGQ24_07240"
     CDS             complement(1575..2351)
                     /locus_tag="VGQ24_07240"
                     /inference="COORDINATES: protein motif:HMM:NF019322.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEV8454667.1"
                     /translation="MTSGLASAYHPSVPLHHQIQRVLRSKIETGEWGSEEKLPTEMEL
                     VRHFRVSRNTIREALASLEQDGLIVRYRRRGTFVHGIRPPADPRATITNLVLGYQANV
                     SVIRAGTVPAPAHVVQFLKVARGQPLRQFVRLEAVGGKALAVVLNYMTLEIGRRIRAK
                     DLKRYSMLEFLRDRLKIPLGDVRQVIEARLPDEEVASLLGIDLTQPVLFIRVMVSDKQ
                     GTPIEIADNFYRADRYHYEVEVPLCLPAGQEGRGELALGG"
BASE COUNT          462 a          842 c          773 g          454 t
ORIGIN      
        1 aggcaggcga cgatatccgc gtcgcccgct tggatcgccc gagccccctg cagcatcccg
       61 atgatgcccg aggcgcctcc gtaggcgccc tgggagagcc agcgcggctc caggccgaag
      121 tgctcagcca cgatcgtcac attgtcgggg ggaaggacga aggccgtcac ggccagccca
      181 tccacccgtc gcatcggaaa cctcgccgag ctgagggcgg cgtcgagcgc ctcccagagc
      241 acctgctgga tcgtcttctc ggtccgcttc tcgtaccggg tctggcccac cccggcgatg
      301 accactccct catacccgac tgtcgccatg gcctcccccg tgggtcagat cacgcggtcg
      361 gcttgcagcc gagcgaattc gtcggcgtcg acacccaggt cgccaagata gaccgcgctg
      421 ttgtcctggc cgatctggcc ccctgcgtgc cgcacctttc ccggcgttcc aaggacccgc
      481 gggacgacgc cttgcatccg gacgatgccg aagtctcgat cctccacctc cacgatgttg
      541 ccccgcgccg catagtgggg atccttgaag atatctctga tatcgtggat gagcccggcc
      601 actacgttct cgcggtcgaa gagagcgagc acttcgctgg actcctgcgt cgcgaaccag
      661 tcggccatga tcttgtccag gacgtcggca ttggctacac gccgcacgtt gtccgtgaaa
      721 cgctggtcgg tggccaggtc gtctcggccc atggcgtgga ccagtcgctc gaaggttttc
      781 tgcgaactcg ccgagatggc aatccaggtt tcgtctcggg tctggtaagt gttcctgggc
      841 gagtcctcct ccatccgatt tccgcggcgc tgcttgacga gccccatctg gtcaaagccg
      901 atcacctgcg cctccgccag ccgaaagagg ggctcgtaca gactcacgtc gatctcctgg
      961 ccatgatggg gctcgtggtg gtcgcggttg tacacggcga agatcgctgc catggcggaa
     1021 aacgttgcgg ccaccgagtc agccatggga aacccgggca gcgtaggagg cttatcggga
     1081 aagccggtga aggatggaac cccgctgaaa gcctcggcga tagtcccgta cccgccccgg
     1141 tggcgatacg ggccactttg cccgtaaccg gagacacgga cgaagaccag gcgcggattg
     1201 atggccgaca ggacatcata tccaagcccc caccgctcga aggtgccggg ccggtagttt
     1261 tcgacgagga tatccgcgtt gacgatcagg cggcggagaa gctcctgccc tttcggaacg
     1321 gagagattga gcgtgatgag ccgcttgttg cgggcgatca ccttccacca gagcgagcgg
     1381 tcatccttga cgggtgtcca gtgtcgcatg gggtcaccga tgccgggttg ctcgagcttg
     1441 atgacgtcgg ctccaaagtc cgccagaagg gtcgtggcca aagggccggc gatcatcgtg
     1501 ccggcgtcca ccacccgcag gccctttagc ggaccctccg caccgttccg tggctcaatc
     1561 gatggcccca tcagctaccc cccgagcgca agctcacctc gcccttcctg acccgcgggc
     1621 aggcagagcg gcacctcgac ctcgtagtgg taccggtcag cccggtaaaa attatctgca
     1681 atctctatcg gagtgccttg cttgtcagac accatgaccc tgatgaacag cactggctgg
     1741 gtcaggtcaa ttcccaggag tgaagcaact tcctcatcgg gcaagcgggc ctcgatcacc
     1801 tggcgaacat cgccaagcgg gatcttcagc cggtcacgca ggaactcgag catcgagtag
     1861 cgcttgaggt ccttcgcgcg aattcgccgg ccaatttcca acgtcatgta gttgaggacg
     1921 accgccagtg ctttcccgcc cacggcctcc agccgcacga actgccgcag gggttgcccg
     1981 cgcgcaacct tgaggaactg cacgacatgc gcaggggccg gcaccgtccc cgctctgatt
     2041 acgctgacat tcgcctggta gcccaggact aggtttgtga tggtcgcccg agggtcggcc
     2101 ggcggccgga tcccgtgcac gaacgttccc cgccgacggt accgaacgat caggccatcc
     2161 tgctcgagcg aggccagcgc ttctcgaatc gtgttgcggc tcacgcggaa atggcgcacg
     2221 agctccatct ccgtcgggag cttttcctcc gaaccccatt ccccggtctc gatcttggaa
     2281 cgcaacaccc gctggatctg atgatgcagc gggaccgacg gatggtacgc ggaagccaga
     2341 ccagacgtca ttatgttccg agattagtac aaaaagccat ctcgcctgtc aagcgaaagt
     2401 cctgcgcggc cgctgtcacc catgtcgcgc acttgaagcc agccaggccc tgggcgaaga
     2461 tgatgcatct cattcaggag cttgccgggc atggcacgat cgagcggagc cgcgggccgg
     2521 gcgcgcagaa c
//
LOCUS       DASYRV010000279         6213 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_941740, whole genome shotgun sequence.
ACCESSION   DASYRV010000279 DASYRV010000000
VERSION     DASYRV010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6213
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_941740"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..374
                     /locus_tag="VGQ24_07245"
     CDS             <1..374
                     /locus_tag="VGQ24_07245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEV8454668.1"
                     /translation="VLRFHWKWSEHEIAQSKHAQETLRGIITAMGGQTLDPMPTEADA
                     YGIAPGGRIIHEVGGARMGNDPRTSVLNRYCQAHEVKNLFVADGAPFVGQADKNPTWT
                     ILALAWRTSEYIAAQRKRGEL"
     gene            564..1064
                     /locus_tag="VGQ24_07250"
     CDS             564..1064
                     /locus_tag="VGQ24_07250"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HEV8454669.1"
                     /translation="MSLDPGPPTLDPKFFTAEEYQTVRALVDLVIPRDGRSGSATDAG
                     VPEFMDFMMADQDTSPEARTAMRGGLAWTDAECRRRFGKRFVDCTQRERMALLDEIAW
                     PARARPEMSHGVAFFNAFRDLTASGFWSSEMGVRDLRYEGNSFVPEWSGCPDAVLRKL
                     DIQYDD"
     gene            1164..2405
                     /locus_tag="VGQ24_07255"
     CDS             1164..2405
                     /locus_tag="VGQ24_07255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEV8454670.1"
                     /translation="MAGKRLGIGVIGSGFNARFHIQAFVAVRDADIVGVWSPNPQRAA
                     EAAALAHSLDVGPARAYRSIAEMVADPAIDALWLCGPNHARLENVEEIVHAVTRGGRE
                     LKGLACEKPLGRNVAEASRITELVKRAGVSHGYLENQLFAPPVVRGHALIWARGASVA
                     GRPYLARAAEEHSGPHAPWFWQGRLQGGGVLNDMMCHSVEVVRYLLTEPNAPRSSLRL
                     AKVTARIGSLKWTRPEYVERLSRTMGKEVDYATRPAEDFAGVTLEFEAKGGLPAFGEA
                     TTSWSFVGAGLRLSAELLGPEYSMSWNSLDSGLKLFFSRQVSGGTGEDLVEKQNAESG
                     LMPVVANEAWAYGYEAEDRHFVRAFLTGETPMLTFDDGVEVVRTLMAAYMSAERGCTV
                     SFPPDGLSSFVPAVASGTWRP"
     gene            complement(2408..3640)
                     /locus_tag="VGQ24_07260"
     CDS             complement(2408..3640)
                     /locus_tag="VGQ24_07260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015506 - nucleoside:proton symporter
                     activity [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015858 - nucleoside transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease"
                     /protein_id="HEV8454671.1"
                     /translation="MSGVRLRLSAMMFLQYFIWGSWYVTLGTYLSRTLHFDGAQVGLA
                     YGSTAIAAMISPFFMGMIADRFLSTEKILAGLHLTGALLIYAGSTIESFGRFYPVLIG
                     YALLYMPTLALTNSLSFHHLTDPSKEFPAVRVLGTIGWIVAGLIVGRLGVEATAIPMR
                     IAAGASVLMGLYSLALPHTPPGPKVGAVRARDVLGLDALTLLKDRSFAVFMIGSFLLC
                     IPLQFYYAFTNLFLNEIGFPEPASKMTLGQVSEIGFMLLMPWFLLRLGLKRVLLLGMA
                     AWSMRYLLFAHGNAGSLASMLYVGILLHGVCYDFFFVAGQIYVNQRANERIRAAAQGL
                     LTFVTLGLGLFIGAGVSGSVVDANSVRDAAGALSHDWRAIWLVPAGLAAGILIIFSVL
                     FRPSLQVRARELAAAPLP"
     gene            complement(3637..4257)
                     /locus_tag="VGQ24_07265"
     CDS             complement(3637..4257)
                     /locus_tag="VGQ24_07265"
                     /inference="COORDINATES: protein motif:HMM:NF018178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HEV8454672.1"
                     /translation="MLTAAERDADWRLLFDGKTTAGWHGYRQKAMPAGWQVIDGALTR
                     VDSAGDIVTNDQYGNFELALEWKVAEGGNSGIFYRVGEDSDYPWRTGLEMQVLDDARH
                     PDGSSPLTSAGALYGIYPAPRGVVRPAGEWNLVRIVVNGHHVEHWLNGVKVVEAELGS
                     PDWETRVKQSKFATMPTYGRNDSGYIGLQDHGDRVAYRNIKIRVLP"
     gene            complement(4388..6064)
                     /gene="ettA"
                     /locus_tag="VGQ24_07270"
     CDS             complement(4388..6064)
                     /gene="ettA"
                     /locus_tag="VGQ24_07270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HEV8454673.1"
                     /translation="MAGEYIFTMRDLRKVVPPSREILKGIYLSFYPGAKIGVLGSNGA
                     GKSTLLRIMAGVDKDFLGEARPLPGIKIGYLPQEPQLDPTKDVRGNVLEGVREQQALL
                     DQFNEISAKFAEPMDDEQMNRLLEKQGTLQERIEALGLWELDHKIDLAMDALRLPPGE
                     ADVSKISGGEKRRVALCRLLLEQPDMLLLDEPTNHLDAESVWWLERYLAEFKGTVVAV
                     THDRYFLDNVAGWILELYQGAGIPWEGNYSSWLEQKEKRLAHDEKQASARQKTLQREL
                     EWIRMSPRARQAKSKARITAYEELRADSERQQEGTAEILIPVPARLGDEVVVTESLTK
                     GFGDRLLIDDLTFSLPRGGIVGVIGPNGAGKTTLFRMITGQEEPDSGSLKVGSTVEVA
                     YVDQSRHDLDPDKTVYEEISGGHDQLQFGRRTVNARAYCAGFNFRGTDQQKRVGTLSG
                     GERNRLHLAKLLKSGGNLLLLDEPTNDLDVDTLRALEEALLGFAGCVVVITHDRWFLD
                     RVATHMLAFEGNSEVVWYEGNYQEYAADYHKRKGASVDQPHRIRYKRLVH"
BASE COUNT         1121 a         1968 c         2028 g         1096 t
ORIGIN      
        1 ccgtgctccg ctttcactgg aagtggagtg agcacgagat tgcgcagtcg aagcacgcgc
       61 aggagaccct ccggggcatt atcaccgcaa tgggaggtca gacgctcgat cccatgccga
      121 cggaggctga tgcgtatggt atcgcacccg gaggtcgcat cattcacgag gtcggcgggg
      181 caaggatggg gaacgatccg cggacgtcgg tgctcaaccg atactgccag gcgcacgagg
      241 tgaagaatct cttcgtggcc gacggcgcgc cgttcgtcgg gcaagcggac aagaatccta
      301 cctggacgat cctggcgttg gcgtggcgca ccagcgagta catcgccgct cagaggaaga
      361 gaggggagct gtgaggaagg tcgagggtcg gaagaaggtc gggggtctag ggtctagggg
      421 tcgaaacatt ggctgaggct gagagggcag atggcaggcc ggatctcaat cggcgcgaga
      481 cgatcaaact gctagccatc gcaccgttgg ggctcgcgct ggcctggaga ccctcacgga
      541 cccaggtcga gagatttctg cgcatgtccc tagaccctgg acccccgact ctagacccaa
      601 agttcttcac tgcggaagag taccagacgg tgcgtgcgct cgtggacctc gtcattcccc
      661 gggacgggcg ctcgggcagc gcgacagatg ccggcgttcc tgagttcatg gatttcatga
      721 tggccgacca ggacacctca ccggaagctc gcaccgcgat gcgtggcggg ctagcctgga
      781 ccgacgcaga atgccgccgc cgcttcggca agcgctttgt cgactgcacc cagcgggaac
      841 gcatggcgct cctcgacgag atcgcctggc cggcgcgagc ccggccggag atgagtcacg
      901 gagtggcttt cttcaacgct tttcgcgacc tcaccgcgtc cggcttctgg tcgagcgaga
      961 tgggcgtgag ggaccttcgt tatgaaggca acagtttcgt gccagagtgg tccggatgtc
     1021 cggacgcggt gctccggaaa cttgatatcc agtacgacga ttagtgctcg gctaaagctc
     1081 acccggagag ggtgattcgc tgcacatgcc gtggcagctg cgcgagcgcg gcggcagcgt
     1141 actccatatc acgaggacat cacatggccg ggaagcggct cggaatcggg gtcatcggaa
     1201 gtggcttcaa tgcccggttc cacatccagg ccttcgttgc tgtgcgggat gcagacatcg
     1261 tcggggtctg gagtcccaac ccgcagcggg ccgccgaggc cgcggccctg gcccactcgc
     1321 tcgatgtggg gccggccaga gcctaccggt cgatagcgga gatggtcgcg gaccctgcga
     1381 tcgacgcgct ctggctctgc gggccgaatc acgctcggct ggagaacgtc gaagagatcg
     1441 tacacgcggt cacgcgcggc ggtagagagc tcaagggact cgcgtgtgaa aagccgctgg
     1501 gacgtaatgt ggctgaagcg agccgtatca ccgagctggt gaagcgcgcc ggcgtatccc
     1561 acggatatct ggagaatcag ctctttgcgc cgccggtcgt ccgaggccat gccctgatct
     1621 gggctcgagg cgcctcggtg gccggtcgtc cctacctcgc ccgggcggcc gaggagcaca
     1681 gtggccccca cgcgccctgg ttctggcagg gacggctcca gggcggcggc gtattgaacg
     1741 acatgatgtg ccactcggta gaggtggtgc ggtacctgct gaccgagccg aacgcgcccc
     1801 ggtcatcgct ccgtcttgcg aaggtcaccg cgcggatcgg ctccctcaag tggactcgcc
     1861 ccgaatacgt cgagcgtctc tcccggacca tgggcaagga ggtcgactac gccacgagac
     1921 cggcggagga tttcgccggc gtgacgctcg agttcgaggc taagggtggg ctgcccgctt
     1981 tcggcgaggc gacaacctcc tggagcttcg tgggcgcggg gctccgcctc tcagcggagc
     2041 tgctcggccc ggaatactcg atgtcatgga acagtctcga cagcgggctg aagctcttct
     2101 tcagccgtca ggtttcggga ggaaccgggg aagatctggt ggagaagcaa aacgccgagt
     2161 ccgggctcat gccggtggtg gcgaacgagg cgtgggccta cgggtacgag gcggaggatc
     2221 gccatttcgt ccgggcgttt ctcacgggcg agactccgat gctcaccttc gacgacgggg
     2281 tcgaggtggt gcggacgctg atggccgcct acatgagcgc ggagcgggga tgcaccgtga
     2341 gcttcccccc ggatggtctt agcagctttg tgccggccgt cgccagtgga acttggcgac
     2401 cgtagtccta aggcagcggt gctgccgcca gttccctcgc ccggacctgc agcgaaggcc
     2461 ggaagagtac cgagaagatg atgagaatgc cggctgccag gcccgccgga accagccaga
     2521 tggcacgcca gtcatgggag agcgcccccg cggcgtcccg cacgctgttg gcgtccacga
     2581 ccgaccccga gacccccgcc ccaatgaaca gtcccagccc cagggtcaca aaggtgagca
     2641 atccctgcgc tgccgcccga atcctctcgt tcgctctctg gttcacgtaa atctgccccg
     2701 caacgaagaa gaaatcgtag cagaccccgt gcaacaggat gccgacgtag agcatcgatg
     2761 ccagcgagcc ggcgttgccg tgggcgaaga ggaggtaacg catcgaccac gccgccatgc
     2821 cgaggagcaa cacccgcttg agcccgagcc gcagcaggaa ccagggcatc aggagcatga
     2881 agccgatctc cgatacctgt cccagcgtca tcttgcttgc cggctcagga aatccgatct
     2941 cgttgaggaa gagattggta aaggcgtaat agaactgcag tgggatgcag aggagaaagg
     3001 agccgatcat gaagaccgcg aacgagcggt ccttgagcag ggtgagggcg tcgagcccca
     3061 ggacatctct tgcgcgcacc gcccccacct tcggaccggg tggggtatgg ggaagcgcga
     3121 gcgagtagag gcccatcaac accgacgctc cggcggcgat ccgcatcggg atcgccgttg
     3181 cctcgacccc gagccgcccg acgatcagtc cggccacgat ccatccaatc gttcccagca
     3241 cacgcaccgc ggggaactcc ttggacgggt ctgtcaggtg gtgaaaggag agcgagttgg
     3301 tgagcgcgag ggtgggcatg tacagcaatg cgtacccgat caacaccggg tagaagcggc
     3361 cgaagctttc gatcgtcgag ccggcgtaaa tgaggagagc tccggtgaga tggagcccgg
     3421 caaggatctt ctcggtcgaa agaaaacgat ccgcgatcat ccccatgaag aacggcgaga
     3481 tcatcgcagc gatggcggtg ctgccgtagg cgaggccgac ctgggcgccg tcgaagtgaa
     3541 gcgttctcga gaggtaggtt cccagcgtga cgtaccacga cccccagatg aagtactgga
     3601 ggaacatcat cgccgagagg cggagccgaa ccccgctcac gggaggacgc ggatcttgat
     3661 gttgcggtac gccacccggt cgccgtggtc ctgcaggccg atatagcccg agtcgttccg
     3721 cccgtatgtc ggcatggtgg caaacttgct ctgcttgacc cgcgtctccc aatcgggact
     3781 gccgagctcg gcctcgacga ccttcacgcc gttgagccag tgttccacat gatggccgtt
     3841 caccacgatg cgcaccagat tccactcgcc tgccggccgc accactcccc gtggggcagg
     3901 gtagatcccg tagagcgctc cggccgaggt aaggggcgag ctgccgtcgg ggtgcctggc
     3961 gtcgtccagc acctgcatct ccaggcctgt gcgccagggg taatcggaat cttcaccgac
     4021 tcggtagaag atcccgctgt tgcccccctc cgccaccttc cactccagcg caagctcgaa
     4081 gttaccgtac tggtcgttgg taacgatgtc gcccgcggaa tccacccggg tgagcgcgcc
     4141 gtcgatgact tgccagccgg caggcattgc cttctggcgg tagccatgcc acccggccgt
     4201 ggtcttgccg tcgaagagaa gtcgccagtc ggcatcgcgc tcggcggccg tcagcatgtt
     4261 ctggggggtt tcctgcgtgg cgcgctcttt tccgggtgag gtgcaagcca ggaatattgc
     4321 ggctgagccc agcagggccg caattaacgt cgtgttcctt gtcaaggagg tcctcgcttc
     4381 cccgccttca atgcaccaac ctcttatacc ggatccgatg cggctgatcc accgacgcgc
     4441 ccttccgctt gtggtagtcc gccgcgtact cctggtagtt cccctcgtac cataccacct
     4501 cgctgttgcc ctcgaacgcg agcatgtggg tagccacccg gtcaaggaac cagcgatcgt
     4561 gagtgatcac cacgacgcac ccggcaaagc cgagcagcgc ttcttccagc gctcggaggg
     4621 tgtctacgtc gagatcgttg gtgggctcgt ccaggagcaa caggttaccg ccgctcttga
     4681 ggagcttggc cagatgcaac cggttccgct cgccgccgga gagcgtcccc accctcttct
     4741 gctggtcggt cccccggaag ttgaagcccg cgcagtaggc ccgggcgttt accgtgcggc
     4801 ggccgaactg aagctgatca tggccacccg agatctcttc gtacaccgtc ttgtctggat
     4861 cgagatcgtg gcggctctgg tccacgtagg cgacctccac ggtcgagccc accttcaggg
     4921 aaccgctgtc gggctcctcc tgccccgtga tcatccgaaa cagcgtggtc ttgcccgcgc
     4981 cgttgggccc gatgacaccc acgatgccgc cgcgtggcag cgagaaggtc agatcgtcga
     5041 tcaggagccg gtcgccgaat cccttggtga gactctccgt cactaccacc tcgtcaccca
     5101 accgcgccgg aaccgggatc aagatctcgg ccgtgccttc ctgctggcgc tcactgtcgg
     5161 cccgtagctc ctcgtaggca gtgatccggg ccttgctctt ggcctggcgc gcccggggtg
     5221 acatccgaat ccattccagc tctcgctgca gggtcttctg ccgggcggag gcttgcttct
     5281 cgtcatgcgc cagccgcttc tccttctgct ccagccagga cgagtagttc ccctcccagg
     5341 gaatgccggc gccctgatac agctccagaa tccagccggc cacgttgtcg aggaaataac
     5401 gatcgtgggt taccgccacc accgtgccct tgaactcggc caggtatcgc tccagccacc
     5461 acacgctctc cgcgtcgagg tgattagtag gctcgtcgag caagagcatg tcgggttgct
     5521 cgaggagcag gcggcagagc gccacccggc gcttctcgcc acccgagatc ttggagacgt
     5581 ccgcttcgcc gggtgggagc cgcagggcat ccatcgccag gtcgatcttg tgatccagct
     5641 cccacaggcc gagcgcctcg atgcgctctt ggagggtgcc ctgcttttcc agcagccggt
     5701 tcatctgctc gtcgtccatc ggctcggcga acttcgcgct gatctcgttg aactggtcga
     5761 gcaaggcctg ctgttctctc accccctcga gcacgttgcc tcttacgtcc ttggtcggat
     5821 cgagctgggg ctcctggggt agatatccga tcttgatccc ggggagaggc cgtgcctcgc
     5881 caaggaagtc cttgtccact ccggccatga tgcggaggag ggtggacttt cccgccccgt
     5941 tcgagccgag caccccgatc ttggcgccgg gatagaagga gagatagatg cccttgagaa
     6001 tctcgcggga agggggcacg acctttctga ggtcgcgcat cgtgaagatg tattcgccgg
     6061 ccatagggcg ggaacataac agcgcggaag cagaaagggc gtcccagcgg ggacgccctc
     6121 cgttctgcac cggccggggc cgggagctca gcttacgtgc ttgttcacca gcttggtcat
     6181 gtcgaacatc gtgacctggg accggccgcc gaa
//
LOCUS       DASYRV010000280         3973 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_941954, whole genome shotgun sequence.
ACCESSION   DASYRV010000280 DASYRV010000000
VERSION     DASYRV010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3973)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3973
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_941954"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1083
                     /locus_tag="VGQ24_07275"
     CDS             <1..1083
                     /locus_tag="VGQ24_07275"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEV8454674.1"
                     /translation="NPAITVVGTDKSVYEGELPWQPRKPLDLETILLHPLTPRRLLIR
                     GQVWWFYRALGSALRKIRPDLIHVVSEPWGGLVIQTLVASRLSRLGAPVCVHGADNIY
                     WHGSRVEQFVRRLILRKVLPRVDGFVSWSREGLEVARQAGLRGVPTAVIPAVVPDPEY
                     FQPLAVRSKRDLRTRLDLPAEEPVVGFIGRLAREKGIMDLVQAFRSIGKPTAFLAIWG
                     SGPLAGEVERWIQREGLHGRFFGPLGLREIASAYQACDVIAVPSRTTGSFKEQFGRVV
                     VEAMLAGTAVVAYRTGAIPEVAGDGAVLVEENDIAGLSKAIRRLAEDRALREGVAASG
                     RARALELFHPEVLAERLVQLWDEILR"
     gene            1080..2444
                     /locus_tag="VGQ24_07280"
     CDS             1080..2444
                     /locus_tag="VGQ24_07280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454675.1"
                     /translation="MNRPLFSVKRAAKRLRTADSRGFAWGFASQGASSVTNLGLSVLA
                     GRILGPSGLGSIFVGFSFYLLATGFLRSLITDPLLAATASLDDDARRGATRSALTTTL
                     LLAAVATTLLIVAAITVPSKVGHGLILFVPWLVPALVQDFWRSVLFRDRRGAAGALND
                     TLWFAGMAVTLPLVLLVRTDWIVVANWGFGALVAAAAGLVQTRVTPAGARTSVRWWWM
                     RAWKLGRWLAAETIIYTVASQVLVFIMAGILGTRPLGGLRAVGTLFGPLTLLAPAIAL
                     PGLPAISRVSAESAERAVRLAISIGVLGVLLTGCYLAVAAALSDQLLEEVFGPSFTQF
                     GALILPIGVGQILIAGTMGFALLLKAQARGKALLAARVVGSVSSLVFVLSLAATNGVT
                     GAAWGMALAGGVSSLALVACGLSGWFPPLPPLPVRTPRQVPGLGSTHVIEQAEETARE
                     SPPN"
     gene            2981..>3973
                     /locus_tag="VGQ24_07285"
     CDS             2981..>3973
                     /locus_tag="VGQ24_07285"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEV8454676.1"
                     /translation="MMNVAILYLDALQGGGYPRDVRWLAGGLASAGVAVKLIAHPGPH
                     RDGLGTAVTVDPQEFHSVAPAADILHLWGIFSPAQFRLSRWLRPRARYVITPAGHLMQ
                     PHLRRRWWKKFPYIAAMQPVLATSPHVAHFFSETERAARGSRYLRAVASFDASLGLFP
                     VFTKKETPAAASDDYLLFFGRNDVYQKGIDILLESYARGMAGGLGLPLLIAGQPAGDS
                     ERFIAKAIDRLGLAGRVQVLGGVSEERKWELLSGARGLVFLSRWDGPPRPLREAMATG
                     TPVIVSAGTNLGEIVRAVGGGLCVETRPDEIAAGLLRSQDDPTARLWKSRAGAYR"
BASE COUNT          635 a         1211 c         1308 g          819 t
ORIGIN      
        1 aaccccgcga tcaccgtcgt cggaaccgat aagagcgtct atgagggcga attgccatgg
       61 caaccgcgaa agccgctcga tctcgagacg attctccttc acccgctcac cccccgccgc
      121 ctcctcatca ggggccaggt gtggtggttc taccgggcac ttggtagcgc cctccgcaag
      181 atacggcctg acctcatcca tgtggtatcg gagccatggg gtggtctcgt gatccagact
      241 ctcgtcgcta gtcgattgtc cagactcggt gctccggtat gtgtccacgg cgctgacaac
      301 atctactggc acggctctcg cgtcgagcag ttcgttcgtc ggctgatcct gaggaaggtt
      361 ctgccgcggg tggacggatt cgtgagttgg agtcgagagg gccttgaggt ggcccggcaa
      421 gccggattgc gcggggtccc gacggcggtg attcccgccg tcgttccaga tcctgagtat
      481 ttccaacccc ttgcggttcg gtccaaaagg gatctgcgaa cgagacttga tcttcctgca
      541 gaggaaccag tcgtggggtt catagggcgc ctggcacggg agaaagggat catggatctg
      601 gtccaggcct tccggagcat cgggaagccg acagcattcc tcgccatctg gggaagcgga
      661 ccacttgcag gcgaagtcga acgatggatc cagagggaag ggctccatgg tcggttcttc
      721 gggccactcg gactccggga gattgcgagc gcctaccaag cgtgtgatgt gatagcggtg
      781 cctagccgca ccacaggatc atttaaggag cagttcggcc gcgtagtggt agaggcgatg
      841 ctcgcgggta ctgcggtcgt cgcgtatcgt acgggtgcca ttcccgaagt cgctggtgac
      901 ggggcggtgc tcgtcgaaga aaacgacatc gcgggacttt cgaaggccat ccggcggctc
      961 gccgaggatc gcgcgcttcg tgaaggggtg gcggcgagtg gacgggccag ggccttggaa
     1021 ctgttccatc ccgaggtgct ggccgagcgc ctggtgcaat tatgggatga gattttgcgg
     1081 tgaacaggcc gctcttttcc gtcaagcggg cggccaagcg tctgcgaacg gccgacagtc
     1141 ggggcttcgc ctggggattc gcttcgcaag gtgcctcttc ggtcaccaac ctcggcctgt
     1201 ccgtcctggc gggccggatc ctcggcccta gcggtctcgg gtctatcttc gtcggtttct
     1261 ccttctacct cctcgcgact ggcttcctgc gatcgctgat caccgacccg ctcttggcag
     1321 ctaccgcgtc tcttgacgat gatgcgcggc gcggcgcgac ccgctccgct cttacgacaa
     1381 cccttctact cgcggccgtg gcaaccacct tgctcatcgt ggcggcaata acggtgccga
     1441 gtaaggtcgg gcacggactg atcctgttcg tcccgtggct cgtgccggca ctcgttcagg
     1501 atttctggcg aagtgtcctc ttccgcgata ggcgcggtgc tgccggggcc ctcaatgaca
     1561 ctctgtggtt cgccgggatg gccgtgaccc taccgctcgt cttgctggtc cgaacggatt
     1621 ggattgtggt tgcgaactgg ggattcggag ctctcgtcgc cgcggccgct ggccttgtcc
     1681 agactcgagt cacgcccgcc ggggcccgaa caagcgtgcg gtggtggtgg atgcgtgcat
     1741 ggaagctggg acggtggttg gcagcggaga cgatcatcta cacggtggct tctcaagtcc
     1801 tcgtgttcat catggccggg atcttgggaa cccgccctct cggcggtctt cgagccgtcg
     1861 ggactctatt cggtccactg actctgcttg caccagccat cgctcttccc gggctgccag
     1921 ccatctcacg cgtgtctgcg gaatcggccg agcgggcggt ccgactagct atttctatcg
     1981 gtgtcctggg cgtcttgctc actggttgct acctggctgt cgccgcagct ctcagcgacc
     2041 agctcctcga ggaggtgttc ggtccttcat tcactcagtt cggagccctc atcttgccga
     2101 tcggcgtggg ccagatcctc attgccggaa ctatgggttt cgctttgctg ttgaaggcgc
     2161 aagcgagggg aaaagccctt cttgcggctc gcgtcgtcgg atcagtgtcg agcctggtct
     2221 tcgtcctgtc tctcgcagcc accaatgggg tgaccggggc agcctggggg atggcgctgg
     2281 ccggaggagt ctcgagcctt gctctcgtgg catgcggcct aagcggctgg tttcctccgc
     2341 ttcctccttt gccggttcgc acccccagac aggtgcctgg tctggggagt actcacgtta
     2401 tcgagcaagc agaggagaca gcgcgagaat ctccgcccaa ctgagaacgc tggattcacc
     2461 tttcggcgcg gaggaatcgt ctcactgaac agttacggcc gtgctggggt cgggggcgtt
     2521 tggcgacctc cgcgcggtgc agtggtcttc gcgccggtca tgttgatcat ccccgccctt
     2581 gcgatgcgga gtcgcccggc gatcgcacgc gcaacctgtg acggagggca gcgctcggtg
     2641 gacgtccgcc tttaggcttg gccctcggcg gggcactgct gtacgttatg gcaatgatca
     2701 gcatggacct gcacggcaac gaggcgggga acttaacctc aaccgagcac tcgggcgcgg
     2761 aggcaagctc gccctcatcg ccccgctgtc agccgcgtcc gaagcgatgg gagcggcgtt
     2821 ggcgggcgcc atgaacctgc tcgcgccccc acactcaccc ggggtggctg ctgaccgggc
     2881 ggaggtcaac ctggaggacc gtgcggtctg taccagtggg caccccttcc actccggtgg
     2941 atgccggttc cgctatagga cgtcgtaata gtgaagtcgg atgatgaatg ttgccatcct
     3001 gtatctcgac gctttgcaag ggggcggcta cccgagggat gttcgctggc tggccggagg
     3061 gttggcgagt gcaggggtcg cggtcaaact gatcgctcac cctggacctc atcgcgatgg
     3121 ccttggcacg gccgtcaccg tcgatccaca agagttccat tcggttgccc cagccgccga
     3181 tattctccac ttgtggggga tcttctctcc cgcgcagttc cgtctcagcc ggtggctgcg
     3241 acctagagct cgatatgtca tcaccccggc aggtcacctg atgcagccgc atctcagacg
     3301 tcgatggtgg aaaaagttcc cctacatcgc agccatgcaa cctgtcctcg cgacctcccc
     3361 tcacgtcgcg cacttcttct ccgagacgga acgagcggcg aggggatcga gatacctccg
     3421 agcggtagca tcattcgacg catccctcgg cctgtttcct gtcttcacca agaaggagac
     3481 tcccgcggct gcatccgatg actatctgct tttcttcggg aggaacgatg tatatcagaa
     3541 gggcatcgac atacttctgg aatcgtatgc ccgtgggatg gcgggtgggc tcggcttgcc
     3601 cctgctcatc gctggccagc ccgcggggga cagcgagagg ttcatcgcga aggcgattga
     3661 ccggctcggt ttggccggcc gagtgcaggt gctcggggga gtaagcgagg agcggaagtg
     3721 ggaattgctc agcggagcgc gcggtctggt gttcctcagc cgctgggatg gcccccccag
     3781 gccgctcagg gaggcgatgg ccaccggcac gcctgtgatc gtgagcgcgg gcacgaacct
     3841 cggtgagatc gttcgcgctg tgggaggcgg gctttgcgtc gagacgagac cggatgagat
     3901 cgccgccggc ctactaagga gccaggacga ccccacggcc cgtttgtgga agagcagagc
     3961 aggggcctac agg
//
LOCUS       DASYRV010000281         1746 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1559750, whole genome shotgun sequence.
ACCESSION   DASYRV010000281 DASYRV010000000
VERSION     DASYRV010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1559750"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..944
                     /locus_tag="VGQ24_07290"
     CDS             <1..944
                     /locus_tag="VGQ24_07290"
                     /inference="COORDINATES: protein motif:HMM:NF014477.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEV8454677.1"
                     /translation="ALLPRSLWAVQPALSGAKGRYGDTAVRARGDYFIERWSWAMGQP
                     VHLQVFAESEGQGYDAAAAALAELRRVESRLTLFDDTSDLVELNRRAGGRGLRVGADL
                     AAVLSAGLRMDQATAGAFNPAVEPLMRAWGFHVPRVNEPSRAEIQEARDAVRTASIVV
                     RGNRVTVPHAATRLDLGGIGVGYGLDRAASVLRRLGIRSALLDISGDFIAIGAPPGQK
                     DGWLIEIAAAGIGASIMASTRLRDAALATSANTMSVVRYGRAVRGHVMNPKTGWPADA
                     LVQVSVVARTGIEADALSTAMLVSGKPAAGVLQYYEA"
     gene            complement(1024..1614)
                     /locus_tag="VGQ24_07295"
     CDS             complement(1024..1614)
                     /locus_tag="VGQ24_07295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454678.1"
                     /translation="MALLGCAAPVRGQSGEPVRALPPGYGTLSQNDLALRMQNDDLEI
                     RFIPLDPRVTRLLARDAYQSILGLVETNRRRIDSVASRAGVSHPGLALVSFFGVRSDV
                     RFDAQNLTLLIRNRAFQPIGTIPLTPRFTSGQLGVRDQASAIYVFEESIPVDDSFTLS
                     YGALTSDDWQNKQSTLERERARVAARAREQPPDTSR"
BASE COUNT          293 a          550 c          613 g          290 t
ORIGIN      
        1 cggccctgct gccccgctcc ttgtgggcgg tacagcctgc cctgagcgga gcgaaggggc
       61 ggtacggcga cacggcggta agggcacgcg gagattactt catcgaacgg tggtcctggg
      121 cgatgggcca gccggttcac ctccaagtct ttgccgagtc ggagggccaa ggctacgacg
      181 cggccgcggc ggcgttggcg gagctacgcc gggtcgagag ccggctcaca ttgttcgatg
      241 acacgagtga tctggtcgag ctgaaccggc gcgccggcgg tcgcgggctc cgggtcggtg
      301 cggatctcgc cgccgtcctc tccgctggtc tccgaatgga ccaggcgacg gccggcgcat
      361 tcaaccccgc ggtcgagcct ctgatgcgtg cctgggggtt ccatgtcccc cgagtaaacg
      421 agccgagccg ggcggagatc caggaagcac gagacgcggt cagaacggcc agcatcgtgg
      481 tgcgtggtaa tcgggttacc gtgccgcacg cggccacccg gctggacctg ggaggaatcg
      541 gggttggcta tggcctcgac cgggcggcgt cggtgctgcg ccggctcggg attcgaagcg
      601 cgttgctcga cataagcgga gacttcatcg ccatcggtgc acctcccggg cagaaggacg
      661 gctggctgat cgagatcgcc gctgcgggga tcggcgccag catcatggca tcgactcggc
      721 tgcgcgacgc ggccctggcc acctccgcca acacgatgtc agtcgtgcgt tatgggcgag
      781 ccgtgcgggg acacgtgatg aaccccaaga cgggatggcc ggccgatgcc ctggtccagg
      841 tcagtgtggt tgcgcggacc gggatagagg cggatgcgct gtcgactgcg atgctggtat
      901 cgggaaagcc tgcggctggc gtcctgcaat actacgaggc ctgattgtca tcctgaacga
      961 agtgaaggat ctctccgcgt gcaggtcgag agatccttcg ctgtgctcag gatgacagcg
     1021 gtttcaccta ctcgtgtccg gtggctgctc ccgcgccctc gccgctaccc gggcgcgctc
     1081 ccgctccagg gtggactgct tgttctgcca gtcatccgac gtcaacgccc cgtacgagag
     1141 cgtgaacgag tcatccaccg gaatgctttc ctcgaacaca tagatcgcgc tggcctggtc
     1201 gcggaccccc agctgcccag aggtgaacct cggggtgagc gggatggtac cgatgggctg
     1261 gaaagcgcga ttccggatga gcagcgtgag gttctgggca tcgaagcgta catctgaccg
     1321 caccccgaag aagctcacca gtgccaaacc gggatgggat acgccagccc gggaggcgac
     1381 cgaatcgatc cgccgccggt tcgtctccac cagacccagg attgattgat aggcatcacg
     1441 ggccaggaga cgggtaaccc gggggtcgag ggggatgaag cgtatctcga ggtcgtcgtt
     1501 ctgcatccgc agcgccagat cgttctgcga cagcgtgccg tacccggggg gtaacgcccg
     1561 gactggttct cccgactgac cacggaccgg ggcggcacag cccagcaggg ccaacagggc
     1621 gacccaatga cgcgttctca ggagatctcc tccccggcgg cggcgatgat gctggcggcg
     1681 agctccggca ttcccatccc cgagcggctg ctggtcagct gaatctggtc cgcccggagt
     1741 cccagg
//
LOCUS       DASYRV010000282         3250 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2184435, whole genome shotgun sequence.
ACCESSION   DASYRV010000282 DASYRV010000000
VERSION     DASYRV010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3250
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2184435"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(129..1022)
                     /locus_tag="VGQ24_07300"
     CDS             complement(129..1022)
                     /locus_tag="VGQ24_07300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454679.1"
                     /translation="MKYAGLVLMILAVTTMGCESRADLTKALAESKAAEAQKDSLLTE
                     VLETTQFVSDLNSELAKAKVTALEIGEERGAPGAQRDKEERKATLERIRKVIDRLNES
                     EAKLTETETRVKNAKIRNARLLAQIATYKQTIEDLKTAAEQQRAETEAMIADQRNQIA
                     TLAGRVDTLSWEKGWLIDTVAHLTAYKNRVYYAVGTKDELIKNGVVTKEGSKFLFFGG
                     TRLEPARRPNLDAFTMIDKTQTLSIPLPRTDKKYKIVSRQSPDFLAGDISEKGEVKGV
                     VEIGSPEEFWSASKYLILVQN"
     gene            complement(1250..1705)
                     /locus_tag="VGQ24_07305"
     CDS             complement(1250..1705)
                     /locus_tag="VGQ24_07305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEV8454680.1"
                     /translation="MRPIFSPRLLGPGLGLAMLACAGGDLNLPTDDTPVELTAVSGDG
                     QEAKVGTRLPDPLVVRVTDAAGRPVAEVPLVFRFQDEVPDAEIDPASVATDSTGRASV
                     RVRLGTTTGPQTIEATIAQDAAPQARATFGVTALEKHGHGGGDGGGDDD"
     gene            complement(1809..2609)
                     /locus_tag="VGQ24_07310"
     CDS             complement(1809..2609)
                     /locus_tag="VGQ24_07310"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEV8454681.1"
                     /translation="MTDPSSDATRPLAVVTGASAGIGKVYCEKLAARGYDLIVSARNA
                     ARLESLREELERQYGVSVEVFPADLTIDTDVSLLAERLTRSPRLALLVNNAGFGTRGK
                     LADASPAIQEAMLRLHVVAPMRLTQAALPVLLANRIGAIVNVSSVASFIYSAGNVNYC
                     ATKAYLTTFSEGLAAELVDTGVKVQALCPGFTRSEFHQRMDVDVSELHRWMWMSADRV
                     VDTSLRALDRGRPVVCVPGLRYKLVVLLLRFIPRGVLRRVTELRSRAV"
     gene            complement(2606..>3250)
                     /locus_tag="VGQ24_07315"
     CDS             complement(2606..>3250)
                     /locus_tag="VGQ24_07315"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEV8454682.1"
                     /translation="EIYEHIRFDGEHVPIATLPGMQDRTVTISGASKTFSVTGWRVGW
                     IIAPEELTGAIRKVHDFLTVGAPAPLQEGVAVALEQLDRAFYGRLADDYRARRDLLHG
                     ALIQSGFRCTPPEGAYYILADFSGLALPGIERSLSDTEFAIWLSREIGVTPVPGSSFY
                     RDGGDGGRALVRFVFCKTDDILLEAARRLRSLSSTGIAPSPRPFEPAARSGLQR"
BASE COUNT          588 a         1066 c         1003 g          593 t
ORIGIN      
        1 ttgttggaaa gagtgttata ccacaatgtg atgcatgtca cactactgcg tggaaagttg
       61 ataccgtcaa gaaaaagacc ctccgagggg ccaacctcgg agggtctcta cttcaggcca
      121 gcgcggtgct agttctgcac caggatcaga tacttcgatg ccgaccagaa ttcctcgggt
      181 gacccgatct ccaccacccc cttgacctcg cccttctcgc tgatgtcccc ggccaggaaa
      241 tccgggctct ggcgggacac gatcttgtac ttcttatctg tgcgaggaag cgggatcgac
      301 agggtctgcg tcttgtcgat catggtgaac gcgtccaggt tgggccgccg cgccggctcg
      361 agccgggtgc cgccgaagaa caggaacttg gagccttcct tcgtcactac gccgttcttg
      421 atcagctcgt ccttggtccc gacggcgtaa tagacccggt tcttatacgc ggtgagatgc
      481 gccacggtgt cgatcagcca gcccttctcc cagctaagcg tatcgacccg gccggcgagt
      541 gtcgcgatct gattccgttg atcggcgatc atcgcctcgg tctcggcccg ctgctgctcc
      601 gccgctgtct ttagatcctc gatggtctgc ttgtaggtcg cgatctgcgc gagcagccgt
      661 gcattccgga tcttggcgtt cttgacccgg gtctcggtct cggtcagctt ggcctcgctc
      721 tcgttcagcc ggtcaatgac cttacggatc cgctccaggg tggctttgcg ttcctctttg
      781 tctcgctggg cacccggggc tccgcgctcc tcgccaatct cgagcgctgt aaccttggcc
      841 ttggcgagct cgctgttgag atcgctgacg aactgcgtgg tctcgagcac ctctgtcagg
      901 aggctgtcct tctgagcctc ggcagccttt gattcagcca gcgccttggt caggtcggcg
      961 cggctctcgc agcccatggt cgtgactgcg aggatcatca ggaccaaccc ggcgtacttc
     1021 atggagagcc tccccctttg acgcggaatg gggacccgga cacaggcaca tgcccgcgcc
     1081 gaaaccgccc ttctggacga gtatcggtca gaggtgccaa aaccctgatc gatcggagat
     1141 atgaagtcga attgttacgc taaccaggag ggccgagccg cggcacccct gtcaacgatg
     1201 acaggtgaca tcgaactgca ggaagttgca ccaacctctg tgacggcggc taatcgtcgt
     1261 cgccaccccc gtccccgccc ccgtgcccgt gcttctccag ggcggtcacc ccgaaggtgg
     1321 cccgcgcttg gggtgcggca tcctgagcaa tcgtggcctc gatcgtctgc ggtccagtgg
     1381 tggtacccag tcgcacccga acggaggcgc gtccggtgga gtctgtcgcc actgaggcgg
     1441 gatcaatctc cgcgtccggg acttcgtcct gaaaacgaaa caccagcggc acctccgcca
     1501 cgggccgccc ggctgcatcg gtcactcgta ccacgagcgg gtcgggcagg cgggtgccaa
     1561 cctttgcctc ctggccgtcg cccgacacgg ccgtcaactc gacgggagtg tcgtcagtgg
     1621 gcaggttgag gtcgcccccg gcgcaagcca gcatagccag accgagtccg gggccgagta
     1681 gccggggcga gaagatagga cgcatgagaa cccccgattt cttttcgaag gctttcgaat
     1741 gatgattctg ggacgatgct gagctatcgc agcctacttc gaaacacggc agccggatag
     1801 gacgtagctc acactgcccg gcttctgagc tcggtaaccc gccggagcac acctcgcgga
     1861 atgaaccgca gtagaagcac caccagctta tagcgtagcc ccggaacgca aacgaccggt
     1921 ctcccccggt ccagtgcccg aagtgaggta tccaccacac ggtccgccga catccacatc
     1981 catcggtgaa gctcactcac atcgacatcc attcgctgat ggaattccga ccgggtgaag
     2041 ccggggcaga gcgcctgcac tttgacgccg gtgtccacca gctcggccgc gagtccctcg
     2101 ctgaacgtgg tcaggtacgc cttggtcgca cagtagttca cgttccctgc tgagtagatg
     2161 aacgaggcga cggaggagac gtttacgatg gccccgatcc ggttcgcgag cagcaccggc
     2221 agcgccgcct gagtaagacg catcggtgcc acgacatgaa gccgaagcat cgcctcctgg
     2281 atcgccgggc tcgcgtcggc aagcttaccc cgggtgccaa acccggcatt gttcaccagc
     2341 agcgcgagcc ggggcgaccg ggtcagccgt tccgccagca ggctcacgtc ggtgtcgatg
     2401 gtgagatcgg cgggaaagac ctcgacggac acgccgtatt gccgttcgag ctcctctctc
     2461 agactctcca gccgcgcggc attccgggcc gacacgatga ggtcgtaacc ccgagcagcc
     2521 agcttttcac agtacacctt cccgatgccg gcggaggcac cggtcacgac agccaagggc
     2581 cgggtagcgt cggaagaagg atccgtcacc gctgtaagcc gctgcgtgcc gcgggctcaa
     2641 acggacgcgg ggatggagca atacccgtgg atgacaatga ccgcaggcgc cgggcggcct
     2701 cgaggagtat gtcgtcggtc ttgcagaaca cgaagcgaac cagcgcgcgg ccgccgtccc
     2761 ccccgtctcg gtagaagctc gagcccggta ccggcgtcac cccgatctcc cgcgagagcc
     2821 agatggcgaa ctcggtgtcc gagagcgagc gctcgatgcc gggaagggca agaccggaga
     2881 agtcggccag gatgtagtac gcgccttcgg gtggggtaca ccggaacccc gactggatca
     2941 gcgcgccgtg gagcaggtct ctgcgggcac gatagtcgtc agccagacgc ccgtagaatg
     3001 cccggtcgag ttgctccagc gccacggcca caccttcctg aaggggggcc ggagcgccga
     3061 ctgtgagaaa gtcgtgcacc ttccggatcg ccccggtgag ctcctccggc gcaatgatcc
     3121 acccgaccct ccaccccgtc acgctgaagg tcttcgaggc cccgctgatg gtcaccgtgc
     3181 ggtcctgcat gcccggcaac gtggcgatag gcacgtgctc gccgtcgaag cggatgtgct
     3241 cgtagatctc
//
LOCUS       DASYRV010000283        11176 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_943530, whole genome shotgun sequence.
ACCESSION   DASYRV010000283 DASYRV010000000
VERSION     DASYRV010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11176
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_943530"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1062)
                     /locus_tag="VGQ24_07320"
     CDS             complement(<1..1062)
                     /locus_tag="VGQ24_07320"
                     /inference="COORDINATES: protein motif:HMM:NF017569.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEV8454683.1"
                     /translation="MTFDAPLLIFLAPVVALAFGFAAWLARRRRIRMARRWSPSLGRL
                     ARGRGGWAPAVVGLSGLLAAVALAGPRAGRTEVRTQTRALSLVLALDISRSMLAEDAA
                     PSRLQRAGREARRLIQDLEGDRLGLIAFAGRSYILAPLTVDGGAIRMYLDALDPDLAS
                     EGGTSLSAVLTQGTELLAAATDAADRVLVIFSDGESHDTLPEAVAQAEALKEAGVHLI
                     VVAEGRAMPTRIPIRDSAGTLLEYKQDEEGNVVRTQRRDDMLRAVVDAAEGTLVPNEL
                     PDQAGAVRDLVAALKRSPTSETRTADLVPRAWIPVLGAALLLLGYTLVRPGPALIGLA
                     GVLLLSGRAEAQRPTAGTRA"
     gene            complement(1059..2033)
                     /locus_tag="VGQ24_07325"
     CDS             complement(1059..2033)
                     /locus_tag="VGQ24_07325"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEV8454684.1"
                     /translation="MTFARPWLLLLLLVLPLWWLLRRRRAVPAAPYSDVTLPAMATRR
                     RWWVVLPPVLRGLALATLTLAAAGPRIGGDTVEIRQEGIAIVITIDISSSMLAEDFAP
                     SNRLEVAKRQAVGFIRGRAADRIGLVAFAGEALTQVPVTLDYPVIEQAVMDLKIGSLE
                     DGTAIGSGLATAVNRLRRAPDKSKVILLLTDGENNKGLIDPRTAAATAAAFGIKVYTI
                     GVGTIGEAPIPTGRGLGGFRYELLPVRIDEPLLQEIAQKTGGRYFRAKDSEALSRIFR
                     QIDALEKTPIHVTRYTRYDETTRPLILLGLTALALELLIGSTLVVRVP"
     gene            complement(2030..2854)
                     /locus_tag="VGQ24_07330"
     CDS             complement(2030..2854)
                     /locus_tag="VGQ24_07330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454685.1"
                     /translation="MTNGLAGWLAASLLVQGAGPTVGDTVWLSRTIAVPPGYIVRAAD
                     WDPADPIELLDRPRIVVTGDSAQIAYPVVVWQPGTQLIELPGPLLLGPGGTVDSLRGQ
                     QVRLEVRSVLPRATPDSALAPQPRAAIVAIRAVSLAPLVVLWVISLALLLPLHLWWRR
                     RGKPTRPAAPAAPVAEPPLDRWADAGEYRAVANISAVRLRGAVAQRVAAAHPGLDTER
                     LLSELAAVRPDWPLAELADILRELDEARFGVAPASDALALSRSSAAMRARLLGEAA"
     gene            complement(2851..3738)
                     /locus_tag="VGQ24_07335"
     CDS             complement(2851..3738)
                     /locus_tag="VGQ24_07335"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HEV8454686.1"
                     /translation="MSAVTPEILKQVKSIELRTRGLVASLFAGEYRSVFRGQGMEFAE
                     VRAYEHGDDFRSIDWNVSARLASPYVKTFTEERELTLMLIVDQSGSTRFGEPLTKAGL
                     AVEVAAVLSLAAAYHNDRVGALLFSDAVERVIPPRKGRRHALRVIRDLVAFEPAGRRT
                     NLGASLSYASRLLRHRSIVVVLSDFIAEGWERPLSRLGARHEVVAITVDEPREHDLPE
                     SGWIEMADAESGRRVLVDTGSREVRVRVARLADRRREERARALAAAGADQVRLETGTD
                     YSIPLRRAFALRARRIHRG"
     gene            complement(3827..4807)
                     /locus_tag="VGQ24_07340"
     CDS             complement(3827..4807)
                     /locus_tag="VGQ24_07340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEV8454687.1"
                     /translation="MSVPKLTKKPAELLPVPRILKEVSRRIVGQDAMVERLLVGLLTG
                     GHILLEGVPGLAKTLAVRTLAEIIHATFSRIQFTPDLLPADVIGTMVFNQKTQEFHVK
                     KGPLFAQIILADEINRAPAKVQAALLEAMQEHQVTIGGSTFRLEEPFMVLATQNPIES
                     EGTYPLPEAQLDRFMLKVRVGYPSRDEEKEVLLRMSGGQEIAIERLLEPATILSARSA
                     IASLYMDQKVVDYIVDLVRATRDPGLAGLTDLKPLIAFGGSPRASIALAQASRAHAFL
                     RDRAYVTPEDVRALAPDVLRHRIVLTFEAEAEDVTTDDVVTRILGAVRVP"
     gene            complement(4851..5636)
                     /locus_tag="VGQ24_07345"
     CDS             complement(4851..5636)
                     /locus_tag="VGQ24_07345"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEV8454688.1"
                     /translation="MRLQRALARAGVASRRAAEKLIEEGRVRVDGKPAILGMKVDPEH
                     QRITVGNRPVKPKERRWLAFHKPLGVVTTAKDQEGRRTVLDFIPDPAALTYVGRLDVM
                     TTGLLLLTTDGEAVHRLTHPRYQMPRRYTALVHGRPTAEIAKAMRERIEIDGRPVVPS
                     EVKVRPGTEGRSIVDLTLQEGRNRIVRRWCEAMGLKVERLARLSYGPVRLGDLPPGRY
                     RPLTPREERALYQAIHLDPENPETDTKARASGKPRRRRRRFSP"
     gene            complement(5642..6226)
                     /gene="scpB"
                     /locus_tag="VGQ24_07350"
     CDS             complement(5642..6226)
                     /gene="scpB"
                     /locus_tag="VGQ24_07350"
                     /inference="COORDINATES: protein motif:HMM:TIGR00281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HEV8454689.1"
                     /translation="MTPLAQLLEAALFSASRPLTAEELASLDPDATPADVRVALEQLR
                     EHYDFNQHGIELVELAGGYQILTRPVYAAAIERAQFSVRAPKLTAATLETLALIAYRQ
                     PVGRIEIEEIRGVSAAGVLRSLQERGLIEVVGRSEALGRPLLYGTTPLFLELLGLRDL
                     ADLPKAEELTIALRPHRAVSEGMDDAAAYVEAES"
     gene            complement(6201..6965)
                     /locus_tag="VGQ24_07355"
     CDS             complement(6201..6965)
                     /locus_tag="VGQ24_07355"
                     /inference="COORDINATES: protein motif:HMM:NF014654.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HEV8454690.1"
                     /translation="MEQLSVVAETEAPAQTLGVGPGFVIELEAFSGPLDLLLHLLREE
                     QIEIADIPIARIADQFLQAIHELGLNQAADYLDMASRLVRLKAQMLLPRPSEEDGWED
                     PRAELVRRLLEYQQIREVAVWMGRSAERRAEQFARGYLPPPPALPIPPLTLNLLDLLS
                     AVERVLAGIPFPVLHRVVARPLDVESATRRIEGLLAEQEEIKWLDALGSAPTIVDVLS
                     TLLALLELAKRGTLRLLQPTPFSPMVIARDAARSVA"
     gene            complement(6965..7699)
                     /locus_tag="VGQ24_07360"
     CDS             complement(6965..7699)
                     /locus_tag="VGQ24_07360"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEV8454691.1"
                     /translation="MTWFSAAFNVRRPRAKDGRLEQLSNFVLALPMLVFAMVAHEYAH
                     AAVALRQGDDTAYMLGRVTLNPLPHIDPWMSIAMPALIWFATNGAYTFGGAKPVPVNP
                     RKFRNYVKGDLLVSAAGVATNLLLSLVCAGIFIVLGMAAGLLPQAVSVFQTAQQMMVY
                     GIWLNLILCFFNLIPVPPLDGSHLLYHALPPRAGAWYRGLNRFGYLPIFVLIFLFRPV
                     MLILLAPVTIGMTYLMRIISPYSVGL"
     gene            7799..8050
                     /gene="rpsT"
                     /locus_tag="VGQ24_07365"
     CDS             7799..8050
                     /gene="rpsT"
                     /locus_tag="VGQ24_07365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEV8454692.1"
                     /translation="MPRIKSAAKRMRQARTRTVLNRTHRSQLRTALKKVRSATGAEAA
                     AAYDEAVKLLDRAGRKSIIHKNAAARQKSRLAKLVASKK"
     gene            complement(8224..9090)
                     /locus_tag="VGQ24_07370"
     CDS             complement(8224..9090)
                     /locus_tag="VGQ24_07370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454693.1"
                     /translation="MAKTPDTDLTIETLLEQRTQYEEWLAKLDSSGDKAPPAVRQRIR
                     GDYEARLQAVLEQLRGRGSAISEELERHHASQAELDRQRRAAEEALAESEVRHSVGEY
                     TEDEWRRVSDQSRREIEELRAQLRSIGTEITRLTQIQSLVAAPRTAAPVSTPAATPRP
                     APKPELIEQAPFVTHVADPMADPAAPPPRTAPQPPPQSEPAAAEVDELTFLKSVSDEE
                     PPAPRRTTAGGSSTATSAPPRASEVQTATPASSGKAAAAVAKTLKCGDCGTLNRPTEW
                     YCERCGAELAGV"
     gene            complement(9345..10631)
                     /locus_tag="VGQ24_07375"
     CDS             complement(9345..10631)
                     /locus_tag="VGQ24_07375"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEV8454694.1"
                     /translation="MRPILIRGGRVIDPSRGADGVADVYLQDGKVASVGRDLGAPEQA
                     LVLEAGGKVVVPGLIDLHVHLREPGQEDVETVATGAMAAAAGGFSAVCAMPNTDPVTD
                     NQAAVGFIVSQAQRAGKARVYPIGAISLGQRGQQLAEFGELVGAGAVAVSDDGKPVVS
                     SHLMRTALEYARTFGIPVADHCEDPTLAAGGAMHEGIVSTRLGLKGIPSAAEEIMVAR
                     DILLAEHTGGHVHLCHMSTRGSVELIRRAKEKGLRVTAEACPHHFTLTHERCEGYDTN
                     AKMNPPLREAEDREAIRQGLRDGTIDVICTDHAPHHYDAKEREFDDAPNGIIGLETAF
                     GLAVTELVETGLLTLCDLVNRMSTMPARIFNLPGGTLAPGAPADVVIADPKAAWVVDP
                     ATFFSKSRNTPFGGRRLTGRAEVTVVRGQVVYQRER"
     gene            complement(10628..>11176)
                     /locus_tag="VGQ24_07380"
     CDS             complement(10628..>11176)
                     /locus_tag="VGQ24_07380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HEV8454695.1"
                     /translation="HPTQGLLDMLTLRDRFKRIKGLKVAICGDILHSRVARSNIWGLT
                     KLGAEVGVCGPASLLPRNVQELGVTILPRIEDAIQWADALNVLRLQLERMESGFLPSL
                     REYNRVFGVTTERLARAPKDLLILHPGPMNRGVEIDSDVADGPHSVILPQVTNGIAVR
                     MAVLYLLAGGSPDWAQGGGDER"
BASE COUNT         1864 a         3810 c         3731 g         1771 t
ORIGIN      
        1 ggcgcgagtg ccagccgtgg gacgctgcgc ctcggcccgg ccggagagca gcagcacacc
       61 cgccagaccg atgagggcag gaccgggccg gacgagggtg tagcccagca ggaggagggc
      121 ggcaccgagc acgggtatcc aggcgcgggg gacgaggtcg gcggtacggg tttccgatgt
      181 gggactccgc tttagcgcgg ccacgaggtc gcgtaccgca ccggcctgat caggcagctc
      241 gttgggcacc agcgtcccct ccgccgcatc caccaccgca cggagcatgt cgtcccgacg
      301 ctgggtccgc accacattgc cttcttcgtc ctgcttgtac tccagcaacg tgccggccga
      361 atcccggatc gggatgcggg tcggcattgc ccgcccttcg gccacgacga tcaggtgaac
      421 gccggcctcc ttgagggcct ccgcctgggc gaccgcttcc ggcagggtgt cgtgcgattc
      481 gccgtcgctg aagatcacca ggacacgatc ggccgcatcg gtggcggcag cgagcagctc
      541 ggtcccctgg gtcaggacgg cgctcagact ggtgccgccc tcgctcgcga gatccggatc
      601 cagcgcatcg agatacatcc ggatggctcc gccatccacc gtgagcgggg ccaggatgta
      661 gcttcgcccg gcgaatgcga tcaggccgag ccggtctccc tcgaggtcct ggatcagcct
      721 gcgcgcctcc cgtccggcgc gctggagcct gctgggcgcg gcgtcttcgg cgagcatcga
      781 ccggctgatg tcgagggcca gtaccaggct caacgcacgg gtttgggtgc ggacctcggt
      841 tcgtcctgcc cgcggcccag ccagagcgac ggccgccagc agcccgctga gccccaccac
      901 tgccggagcc cagccgccac ggcctcgggc cagccgcccc agtgagggag accaccgccg
      961 ggccattcgg atccggcgcc gccgggcgag ccacgcagcg aagccaaagg caagagccac
     1021 gacgggagca agaaagatga gcagcggcgc gtcgaacgtc atggcacccg gaccacgagg
     1081 gtggatccga tcaacagctc gagcgccaat gcggtcagcc ccaggaggat caatggccgg
     1141 gtcgtctcgt catagcgggt gtacctggtg acgtgaatcg gagtcttctc cagcgcatcg
     1201 atctgccgga agatccggct gagtgcttca ctgtccttgg ccctgaaata ccggccgccg
     1261 gtcttctggg ctatctcctg caacaacggc tcgtcgatgc gcaccggaag cagctcgtag
     1321 cggaagccgc ccagcccgcg accggtgggt atgggcgctt cgccgatggt ccccaccccg
     1381 atggtataga ccttgatccc gaaggcggca gcagtcgccg cagcggtgcg gggatcgatc
     1441 agccccttgt tgttctcccc gtcggtcagc aggagaatca ccttggactt gtccggtgct
     1501 cgccgcagcc ggttcaccgc cgtggccagg ccgctcccga tggcggttcc atcttccagg
     1561 ctcccgatct tcaggtccat cactgcttgt tcgatgaccg gatagtcgag ggtgaccggc
     1621 acctgggtca gggcctcgcc ggcaaacgcg accaagccga tccggtcggc cgcgcggccg
     1681 cggatgaagc ccaccgcctg ccgcttggcc acttccagcc gattcgaggg cgcgaaatcc
     1741 tccgccagca tgctgctgga gatgtcgatg gtgatgacga tcgcgatacc ctcctgcctg
     1801 atctcaactg tgtcgccccc gatgcgcggg cccgcggcgg cgagggtaag cgtggccagc
     1861 gccagtcccc gcaggaccgg gggaagcacc acccaccagc gccgacgggt cgccatggcc
     1921 ggcagcgtca catcgctgta gggcgcggcc ggaaccgcgc ggcggcggcg gagcagccac
     1981 cagagtggaa gcaccagaag cagcaacagc aaccaggggc gggcgaacgt cacgctgcct
     2041 cgccgagcag gcgcgcgcgc atggcggccg acgaacgtga gagcgccagc gcgtcggacg
     2101 cgggcgcgac tccgaaacgg gcttcgtcca gctcgcggag gatgtcggcc agctcagcca
     2161 gcggccaatc gggccggacc gcggccagct cggacagcaa tcgctccgtg tcgagcccgg
     2221 ggtgtgcggc tgccacacgc tgagccaccg cgccgcgcag ccgcaccgcc gagatgttgg
     2281 ccaccgcgcg gtactcgccc gcgtcagccc aacgatccaa cggcggctcg gccaccggtg
     2341 ctgccggcgc agcaggccgg gtcggcttgc cccggcgccg ccaccagagg tgcagcggaa
     2401 gcagcagcgc cagcgatatg acccagagaa ccaccagggg cgccaggctc acggccctga
     2461 tggccacgat ggccgcgcgc ggctgcggag cgagggcaga gtcgggcgtc gcgcgcggca
     2521 gcacacttct gacctccagc ctcacctgct gacccctcag cgagtcgacc gttccgccgg
     2581 gtccgaggag cagcggcccc ggcagctcga tcagctgcgt ccccggctgc cacactacca
     2641 ccgggtaggc gatctgggcc gagtcgccgg tcaccacaat ccggggccgg tcaagcagct
     2701 cgatcggatc ggcgggatcc cagtcggcag ctcgcacgat gtaccccggg gggacggcga
     2761 tcgtccggct cagccacacg gtgtcgccca cagtgggacc ggcgccttgc accaggagac
     2821 tcgcggccag ccagccggcc agtccgttcg tcatccgcgg tgaatccggc gagcgcgcag
     2881 cgcaaaggcg cgccgtaagg ggattgaata atcggtgccg gtctccagcc gcacctggtc
     2941 cgcgccggct gccgcgagcg cccgggcgcg ctcctctcgc cgccggtcgg caagccgggc
     3001 cacacgaaca cggacttcac ggctcccggt atccaccagg actctccggc ccgactcggc
     3061 gtcggccatc tcgatccacc cggattccgg caggtcgtgc tctcgcggct cgtctaccgt
     3121 gatggcgacg acctcgtggc gagcgccgag ccggctcaag ggccgctccc acccttcggc
     3181 gatgaagtcc gagagcacca ccacgatgct acggtgacgg agaaggcgac tggcgtacga
     3241 gagactggca cccaggttgg tccggcgccc ggcgggctcg aacgccacca gatcccgaat
     3301 gacccggagc gcgtgccggc ggcccttccg aggcgggatc acccgctcga cggcatcgga
     3361 gaacagaagg gcgccgactc ggtcgttgtg atacgccgcc gccagggaga ggaccgcggc
     3421 cacctcgacc gcgagcccgg ccttcgtcag cggctcgccg aaccgggtcg accccgactg
     3481 atccacgatc agcatcagcg tgagctcgcg ctcttcggtg aacgtcttca cgtagggact
     3541 cgccagccgg gccgagacgt tccagtcgat cgaccggaag tcatcgccgt gctcgtaggc
     3601 ccgcacctcg gcgaactcca tgccctgccc ccgaaagacc gagcggtact ccccggcaaa
     3661 cagggaggcc acgaggccgc gggtgcggag ctcgatggac tttacctgct tgaggatctc
     3721 gggagtgacg gcggacatgg aagcaggagg tctagagtct agggtctaga tgaatacagg
     3781 tcccggagag tcacatagac cctcgaccct agacccttga ccattctcat ggaaccctca
     3841 ccgcgccaag aatccgggtc accacatcat cggtggtcac gtcctccgcc tcggcctcga
     3901 aggtgaggac gatgcgatgg cgcaggacgt cgggcgcgag tgcccggacg tcctccgggg
     3961 tcacgtacgc gcggtcgcgc aggaaggcgt gagcccgtga cgcctgggcc agtgcgatcg
     4021 aggcccgggg cgagccgccg aaggcgatca acggcttgag atcggtgagc cccgccagac
     4081 ccgggtctct cgtggcgcgc accaggtcca cgatgtagtc caccactttc tgatccatgt
     4141 agaggctggc gatggcgctc cgggcggaga gaatcgtcgc gggctcgagc agacgttcga
     4201 tagcaatctc ctggccgcca ctcatcctga gcagcacctc tttctcctca tcgcggctcg
     4261 ggtagccgac ccgaaccttg agcatgaacc ggtccagctg cgcctcgggc aagggatacg
     4321 tgccttcgct ctcgattgga ttctgggtgg cgagcaccat gaacggctcc tccaggcgga
     4381 aggtgctgcc cccgatggtc acctgatgct cctgcatcgc ctccagcaac gcggcctgga
     4441 ccttggccgg ggcgcggttg atctcgtccg ccaggatgat ctgggcaaac agcggcccct
     4501 tcttgacgtg aaattcctgg gtcttctggt tgaacaccat cgtcccgatg acgtccgccg
     4561 gcagcagatc gggcgtgaat tggatgcggg agaacgtggc gtggatgatc tcggccagag
     4621 tgcgaaccgc cagcgtcttc gccagcccgg gaaccccttc gagcaggatg tgccccccgg
     4681 tcagcagtcc caccaggagc cgctccacca tggcatcctg ccccacgatg cggcgagaca
     4741 cttccttcag gatccgcggt accggcagca gctccgccgg tttcttggtc aacttcggga
     4801 cgctcattcc ggctgggctc ctcgactccc cacgcttcgt tggggattcc tcagggtgag
     4861 aatctccggc gtcgccgcct tggcttgccc gacgcccgcg ccttggtatc ggtttcaggg
     4921 ttctccgggt ccaggtggat ggcttgatac aaggcgcgct cttcgcgtgg ggtcagcggg
     4981 cgataccggc ccggcggcag atcgcccagc cggaccggtc cgtacgagag acgcgccagc
     5041 cgctcgacct tgagccccat cgcctcgcac cagcggcgca cgatccgatt gcggccctcc
     5101 tggagcgtga gatccacgat gctgcgaccc tccgtccccg gccgtacctt gacctcgctc
     5161 ggcacgaccg gacgtccatc gatctcgatc cgctcccgca tggccttggc aatttcagcc
     5221 gtcggccggc cgtgtacgag cgcggtataa cggcgaggca tctgataccg gggatgcgtc
     5281 agccggtgga ccgcctcgcc atcggtagtg aggaggagga gaccggtggt cattacgtcg
     5341 agccgtccga cgtaggtcag cgcggcggga tcgggaatga agtcgagaac cgtgcgacgg
     5401 ccctcctggt ccttagccgt ggtgactacg cccagcggct tgtggaacgc gagccaccgg
     5461 cgctccttag gtttcaccgg ccgatttccg acggtaattc gctggtgctc gggatcgacc
     5521 ttcatgccga gtattgcggg cttcccatcg acccggaccc ggccttcctc gatcagcttc
     5581 tccgccgccc ggcgcgacgc gactccagcc cgggccagcg cccgctggag ccgcatttcg
     5641 gtcacgattc cgcctcgacg tacgccgcgg cgtcgtccat gccttcggaa acggcacggt
     5701 gcggtctgag cgcgatggtg agctcctcag ctttcggaag gtcggcgaga tcgcgcaggc
     5761 cgagcagctc caggaagagc ggtgtagttc cgtagaggag cgggcgaccc agcgcctcgc
     5821 tccgacccac cacctcaatc aacccgcgtt cctggagcga gcgtaacacg ccggcagcgg
     5881 acaccccccg aatctcctcg atctcgatcc gacccaccgg ctggcggtac gcaatgagcg
     5941 cgagtgtctc cagcgttgcc gcggtgagct tcggagcccg aaccgaaaac tgggcccgtt
     6001 cgatggcggc ggcgtacacc ggccgggtca ggatctgata cccgccggca agctctacca
     6061 gctcgattcc gtgctggttg aagtcgtagt gttcccgaag ctgttccagc gccacgcgca
     6121 cgtcggcggg tgtggcatcc gggtcgaggc tcgccaactc ctcggcggtg agggggcggc
     6181 tggcgctgaa gagcgcggct tcaagcaact gagcgagcgg cgtcacgcgc gatcaccatg
     6241 ggtgaaaagg gagtcggctg cagcagccgg agggtacctc gcttggccag ctccagcagg
     6301 gcgagaaggg tggacagcac gtcgacgatg gtcggcgctg agccaagcgc gtcgagccac
     6361 ttgatctctt cctgctccgc cagcaagccc tcgattcgac gagttgcgct ctccacatcc
     6421 agcggacgcg ccacgactcg gtggagcacc gggaacggga tacccgcgag gactcgctcg
     6481 accgccgaca gcaggtcgag caggttgagg gtcagcggcg ggattggcag cgccggcggc
     6541 ggcggcaaat acccgcgggc gaactgctcg gctcgtcgct cggccgagcg gcccatccac
     6601 acagccacct cccgaatctg ctgatactcg aggagccggc gcaccagctc ggcacgagga
     6661 tcctcccagc cgtcctcctc cgacgggcgc ggcagcagca tctgcgcctt gagccgcacc
     6721 aggcggctgg ccatatcgag gtagtccgcc gcctggttga ggcccagctc gtggatcgcc
     6781 tggagaaatt gatcggcgat ccgggcgatc ggaatgtcgg cgatctcgat ctgctcttcc
     6841 cgcaagagat ggagcagcag gtccagcggg ccggagaatg cctcgagctc gatgacaaaa
     6901 ccgggcccca cgcccagcgt ctgggccggc gcttcagtct ccgccacgac cgacagctgt
     6961 tccatcacag gcctacgctg tagggggaga tgatgcgcat gagatacgtc atgccgatgg
     7021 taacgggggc gagaaggatc agcatgacgg gacggaacaa aaagatcagc acaaaaatcg
     7081 gcaggtagcc aaatcggttc aacccacgat accaggctcc cgcgcggggc gggagcgcgt
     7141 gatagagcag atgggagccg tccaggggcg gtaccggaat caggttgaag aagcagagga
     7201 tcaagttcag ccagatcccg taaaccatca tctgctgcgc tgtttggaac accgaaaccg
     7261 cttggggcag aaggccggcg gccatgccca gcacgatgaa gatgccggcg cataccagtg
     7321 agagcagcag attcgtcgct actccggccg ccgagacgag caggtctccc ttcacatagt
     7381 tccgaaactt gcgcggattc accgggaccg gcttggcacc tccgaaggtg tacgccccgt
     7441 tggtcgcgaa ccagatcagc gccggcatgg cgatgctcat ccagggatcg atgtgcggca
     7501 gcggattgag cgtcacccgg cccagcatgt aggcggtgtc gtccccctgc cgaagggcca
     7561 cggcggcgtg ggcgtattcg tgggcgacca tggcgaagac gagcatgggg agggcgagca
     7621 cgaaattgct gagctgctcc aggcggccat ccttggctcg agggcgccga acgttaaacg
     7681 cggcggagaa ccaagtcaaa gcggtttcct gcttgacctt gcacgcttgg taccctatgt
     7741 tttcgggctc agcttccgga accgctccgg atcgagtcaa ccgttcgccg aggtagccgt
     7801 gccccgaatc aagtccgccg ccaagcgcat gcgccaagcc cgtacccgca ccgttctcaa
     7861 tcggacgcat cggagccagc tccgcaccgc gctcaagaag gtacgcagtg ccaccggggc
     7921 ggaggctgcg gctgcgtacg acgaggcggt gaagctcctc gaccgggcgg ggcgcaagag
     7981 catcattcat aagaatgccg ccgcgcggca gaagagccgg ttggccaagc tggtggcgtc
     8041 gaagaagtga aaaggtgagg ggtgagaggt aagaagtgag agggggcgcc gctgacgact
     8101 cgggcgcccc ttttagtttg taggaaaccg ttaaagaaac agcttgagct cgagggcgta
     8161 acctattcaa tcgcgtgcac cttcctctca cctctcacgc cttacctctc acctctctaa
     8221 ccctcacacc cccgccagct cggccccaca acgttcgcag taccactcgg tcgggcggtt
     8281 gagggtgcca cagtcgccac acttgagtgt cttggccacc gccgcggccg ccttgccgga
     8341 cgaggccggc gtggcagtct ggacctcgga cgcacgaggc ggcgcgctgg tggcggtgga
     8401 ggacccgccc gcagtagtgc gccggggtgc tgggggttcc tcgtctgaca ccgacttgag
     8461 gaaggtgagc tcgtccacct cggcggctgc cggctccgac tgcggcggcg gctggggagc
     8521 ggtgcgcgga ggcggtgcgg ccgggtccgc catggggtcg gccacgtgag tgacgaaagg
     8581 agcctgttcg atcagctcag gcttgggcgc aggccgtggt gtggcggccg gggtggaaac
     8641 cggcgcggcg gtacggggcg ccgcaacgag agactggatc tgggtcagcc gggtgatttc
     8701 ggtaccgatg cttcggagct gagctcgcag ctcctcgatc tcccgccggc tctggtcgct
     8761 gacccggcgc cattcgtcct cggtgtattc tccgaccgag tgccgcacct cggactcagc
     8821 gagcgcctcc tccgcggcac ggcgctggcg atcgagctcc gcttgtgacg catggtgtcg
     8881 ctcgagctct tccgagatcg cacttccgcg gccgcgcaac tgttccagga cggcctggag
     8941 ccgggcctca tagtcgccac gtatccgctg tcgtacggcg ggaggcgcct tgtctcccga
     9001 gctatcgagc ttggccagcc attcttcgta ctgggtccgc tgctccagga gcgtttcgat
     9061 ggtcagatca gtatccgggg ttttggccat gggaagtcat tcctctcatc cgctctaaga
     9121 cgtcgatctg ttcccgggtg aggcgactca ccctgccgag agcttgtgct gccaggagaa
     9181 ttcgcgctgg tggccgttgg aggagtcgat agaccctcag gggcaaatct aattcactgc
     9241 tggcctgccg ggagcctttt cggtgtttcc cggccaagtc cacctcgacg aggtcgtcgg
     9301 ggcgaagacc tcgcgcgtga cttctcgccg ggctacgggc ttgctcaacg ctcccgctgg
     9361 tagaccacct ggcccctgac gacggtgacc tccgcccggc cggtgagacg ccggcctcca
     9421 aatggggtgt tccggctctt cgagaagaag gtggcggggt ccacgaccca ggcggccttg
     9481 ggatcggcga tgacgacgtc ggccggagca ccaggcgcga gagtcccacc cggcaaattg
     9541 aagatccggg ccggcatggt gctcatccgg ttcaccaggt cgcacagggt gagcagcccc
     9601 gtctctacca gctcggtgac cgccagccca aacgccgtct ccaggccgat gatgccgttc
     9661 ggcgcatcgt cgaactcgcg ctccttggcg tcataatgat gcggcgcatg gtcggtgcag
     9721 atgacgtcga tcgtcccatc gcgtagcccc tggcggatgg cctctcggtc ctccgcctcc
     9781 cggagcggcg gattcatctt cgcgttcgtg tcgtacccct cgcaccgctc gtgggtgagc
     9841 gtgaagtgat ggggacacgc ctcggccgtg acgcggaggc ctttctcctt ggcgcgtcgg
     9901 atcagctcga ccgatccccg cgtcgacatg tggcacaggt gcacgtgccc gccggtgtgc
     9961 tccgcgagca ggatgtcgcg ggccaccatg atctcctcgg ccgccgacgg tatccccttg
    10021 agaccgagcc gggtcgagac gatgccctcg tgcatggccc cgccggctgc caacgtggga
    10081 tcttcacagt gatcggccac aggaatgccg aaggtgcggg cgtactcgag cgcggtccgc
    10141 atcaggtggc tggagacgac cggcttgccg tcgtcgctca ctgccaccgc acccgctccc
    10201 accagctcac caaactccgc cagctgttgg cctcgctgcc ccagggaaat ggcgccgatc
    10261 ggatagacgc gcgccttccc ggcacgctgc gcctggctca cgatgaagcc gacggccgcc
    10321 tggttgtcgg tcacgggatc ggtgttcggc atggcgcaga ccgcggagaa gccgccggcc
    10381 gccgccgcca tcgcgccggt ggctacggtc tcgacgtcct cctggcccgg ctcacgcaaa
    10441 tgcacgtgaa ggtcgatcag gccgggcacc acgaccttgc caccggcctc gagcaccagc
    10501 gcctgctccg gtgcgccgag gtcgcggccg accgaggcga ctttgccatc ctgcaggtat
    10561 acgtcggcaa cgccatcggc gccgcgcgag gggtcgatca cccggccgcc ccggatgagg
    10621 atcggcctca tcgctcgtct cccccgccct gcgcccagtc cggcgatccg ccggcgagca
    10681 ggtacagcac cgccatccgg actgcgatgc cgttggtgac ctgcggcagg atgacgctgt
    10741 ggggcccgtc ggccacatcg ctgtcgatct ccacgccccg attcatcggg cccgggtgca
    10801 ggatcagcag atccttcggc gcgcgggcga ggcgttcggt ggtcacgccg aacacccggt
    10861 tgtactcccg gagggaaggc aggaaccccg actccatccg ctcgagctga agccgcagga
    10921 cgttgagcgc atcggcccac tgaatcgcgt cttcgatgcg gggcaggatg gtgacaccga
    10981 gctcttgcac gttccgcggc agcagcgatg ccggcccaca cacgcctacc tccgcgccca
    11041 gcttggtgag tccccagatg ttgctccggg cgaccctgct gtggaggatg tcgccgcaga
    11101 tggcgacctt cagccccttg atccgcttga accggtcgcg cagcgtgagc atgtccagca
    11161 ggccctgggt cggatg
//
LOCUS       DASYRV010000284        19309 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_321013, whole genome shotgun sequence.
ACCESSION   DASYRV010000284 DASYRV010000000
VERSION     DASYRV010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 19309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19309
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_321013"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            67..1164
                     /locus_tag="VGQ24_07385"
     CDS             67..1164
                     /locus_tag="VGQ24_07385"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEV8454696.1"
                     /translation="MSGKREKLETAVEAVDNVRLPLTADRSRCLVIQTAFLGDVILTT
                     PLLSVLADRHGPVDVVTTPAAASLLDLHPAVRDVVRYDKHGVGRGWKPFRRLGRELRA
                     RGYGRVYLPHRSLRSALLALWSGAKERIGFADSSAAVTYTSRIPRPRGGHEVERLLAL
                     AGVKPGDAAPPVSLGLAPTDLAAADAWLASHGVGPDFVAIAPGSVWATKRWPYYAELA
                     AGLHRPAVIVGSAEDTQLADAIVEAARGRAVSAAGALTLRGSAALIRRAAVLVTNDSA
                     PLHLATAVGTPVVAVFGPTVPKFGFGPRRTGDIVLGHDELSCRPCSTHGPPACPLGHH
                     RCMRDLSAGEVAAALARIIGSEEPRAIRSRD"
     gene            1142..2146
                     /locus_tag="VGQ24_07390"
     CDS             1142..2146
                     /locus_tag="VGQ24_07390"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEV8454697.1"
                     /translation="MRFVLGIDIGGTNLVVGSVAEDGSALHALGSEPTHAEAGQSDVL
                     DRLITLAKRAIDQTRREVPGAEIIGIGVGAPGPLDTKSGIVLLTPNLGWVNLPLRRII
                     HERLSLPAALDNDANCAVLGEWWMGAARGTKIAIGITIGTGIGGGLIINGKLFHGASD
                     CAGEIGHTTIDTEGRRCKCGNYGCLEAYASGPNIALRACEEIQAGAVSRLASYVGGDL
                     RKITAQTVYQAAHDGDDLALEVVNDTAKFLGAAIANLVNVFNPEVVVICGGVTLAGDH
                     LFVPLRREVARRAFKPAVSVCRIVPCELTGTAGVYGAAKVFLDTAGRRGSGAAGQAAS
                     "
     gene            2148..3167
                     /locus_tag="VGQ24_07395"
     CDS             2148..3167
                     /locus_tag="VGQ24_07395"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase family protein"
                     /protein_id="HEV8454698.1"
                     /translation="MRIGILGSLVWDLIYGRDQLAPPVEEWGGIAYALAGLDASLPPD
                     WEIVPLIKVGRDLSAEAQELLRGLSRLAPGARCAEVTAPNNRVVLHYQSTERRCERMA
                     GGVPGWTWAELGPMVQDLDAIYVNFISGFELCLGTAQALRQGFAGPIYADLHSLFLGM
                     QQDGMRVLQPLSNSPAWFGCFDMVQLNEDEMQQLTLDPLTLAADALGAGVSLLTVTLG
                     PRGVAYVAAPGFDGLAGKRGRGEAGTNQRPSSAHAYDLTSPPPRFPAPLSVRTALISA
                     PPTETLDPTGCGDVFGAVAFARLLAGDSVEAALRHATALAARNAGFRGAGGLARHLRG
                     ELVTP"
     gene            3164..4066
                     /locus_tag="VGQ24_07400"
     CDS             3164..4066
                     /locus_tag="VGQ24_07400"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEV8454699.1"
                     /translation="MTRVIEVPAHFDDRSFDAFAGGFGEWPPDEKMLLDARSTQWASP
                     YGLIGLLTAGQALAEAKRERPLLTVPTSDEVKRYWARAGFFRHAAELFELHGKVPRAT
                     TTGPSDVLLDVTPVRASEDVHGVVDKISEGASRILHGELGLEMKATLRFSMALSEACQ
                     NIVEHAGTSGWVAVQAYTFRRRLGRRVVVIAVSDGGVGFRRSLESTHAKRFGERWGDG
                     AALEAALIQGVSRFRDPGRGQGLAFIKRFLDQWEGKISIRSGTARLSIIPPWDEDVPL
                     SENLAYFPGAQVQIIIPAQGAESR"
     gene            4063..4599
                     /locus_tag="VGQ24_07405"
     CDS             4063..4599
                     /locus_tag="VGQ24_07405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454700.1"
                     /translation="MIQTIRIGHLLREAVAAPYRNLVTRPTGAAVRTRIEEALAGSNC
                     MTALLDFSGIELVDLSCADEVVAKLLLAVRTAYFVVLQGLREDHHEAIEHVLVHHRLA
                     VAAMPPDSRDPRLLGWVRADARRAFACVCDHGPLAVPDLCGVLMWPEPRGREALHDLA
                     IHRLVRPIGELYHPLPTA"
     gene            4596..5750
                     /locus_tag="VGQ24_07410"
     CDS             4596..5750
                     /locus_tag="VGQ24_07410"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aspartate aminotransferase family
                     protein"
                     /protein_id="HEV8454701.1"
                     /translation="MSRSGFGFSTTAIHGTPHRRPDWAPVAPALLQSSTFVNPIGSDE
                     EVLYSRYGNNPNQVELARKYALLEGAEDAIFVASGMGATALAHLAMLRPGDHLIASTW
                     IYGGTQRLFDEELARFGIEVTYVSPDQVRHWRKSLRKATRAIFVETPTNPLMRVIDLG
                     PISYLAKEHGLALLVDATFASPINYRPLEHGADVVITSATKYLNGHSDVIAGVVAGSS
                     AFVEEVNRLMRLWGQAIDPHAAWLIDRGMRTLAVRMERHNANGMAVAQWAEQHPGIAK
                     VHYPGLPSHPDHAHAKTVLNGFGGMVGLELKGGAKAAERLLKRLKLITHAPSLAGVET
                     LVSEPRLTSHKSIGSEGRAKIGIPDGFLRLSCGLEDAADIIGDLEQAIGK"
     gene            5836..6525
                     /gene="ftsE"
                     /locus_tag="VGQ24_07415"
     CDS             5836..6525
                     /gene="ftsE"
                     /locus_tag="VGQ24_07415"
                     /inference="COORDINATES: protein motif:HMM:TIGR02673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HEV8454702.1"
                     /translation="MIRFSNVYKAYPNGAMALKDVSFHVSKGEFVFLTGHSGAGKSTI
                     MKVLFAEQRPSGGEVRVSGYNVTTLRPDDVPRLRRRLGVVFQDFRLLEDRTAAENIAF
                     ALEVTGARTDTIAARVMRVLTQVGLSSKARAYPRELSGGEQQRVAIARALVNDPAILL
                     ADEPTGNLDERATRGVFQLLRDINAGGTVVVMATHDLDLVRQTAYRIIEMRDGSLVYD
                     SAVDEAAAEAQ"
     gene            6522..7391
                     /locus_tag="VGQ24_07420"
     CDS             6522..7391
                     /locus_tag="VGQ24_07420"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HEV8454703.1"
                     /translation="MKLLSREALLSFRRAPLLSVLSVTTIAFSLFTVGLFGLVAINLR
                     QALRGIEERVEIVAYILRGTPAETIAIASQDIAAFPEIQEVNYVTEEQALQRARAELV
                     EFRDAYRDLQVNPLPASIEVRLKDGYRDAASAERVAQRLQGFGFIEDVRFGREWVQKL
                     DHLRNLTGLVGLVIGLAFAAVAVVIIGVTIRLTILQRAREISIMRLVGATNWFIRGPF
                     LLEGALKGLLGGLLSLVLCYAGYLLFRDKSGGTLAGLIFFRPEHMVLIIVFGVLLGLG
                     GSLVSVGRHLRHV"
     gene            7384..8664
                     /locus_tag="VGQ24_07425"
     CDS             7384..8664
                     /locus_tag="VGQ24_07425"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEV8454704.1"
                     /translation="MCRQGGGAAGRRGSLFNALLILRFAGAALLPRCPAAPLGALVIF
                     ILSATSAHAQGTPDLEESRRRLEEIRAERDRLQRQRERLQGQVHDVNDELSNLERQRE
                     STQRIVNEIERQIGGLASQLDRSSAELILAQDNLAERRAVLQRRLVDIYKRGNLHTFQ
                     VLLAAESFGDLLSRYKYLYLTSEQDRSLVTDVEKLRNRVVQQRNNILNVRGELDRRRE
                     EREAEASKYSELASERARKLQSLRRSARSTERRLTELQKDESRLNGLLASLERARRDE
                     LARGALRGGVSAPGSITTADLGKLDWPVEGTIVYRFGRDTLPSGGIIRWNGVGIAAPV
                     GTPVKAVEAGKVRLVGQFGTYGLTIVLEHGNGYYSVYSHLETADVKLGASVSKGGAIG
                     TVGGLNSDYGPHLHFEIRGDKQIALDPTMWLRRR"
     gene            complement(8978..9886)
                     /locus_tag="VGQ24_07430"
     CDS             complement(8978..9886)
                     /locus_tag="VGQ24_07430"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEV8454705.1"
                     /translation="MVEALAQPARPKVLLVGDASARPAGLERALTRAGFQLVEQEDAA
                     TELQADAVLITLTKVDGEPLADLVPPGSADTSPIPPRIVLLSASDPDGPVAALVQGAA
                     DALAAPIHLPELCARLHARIREASAPLLNGPEPSPAAVLTGPDEDETEDALDRRVQEE
                     LERARRYSLSFSLVLLGMDELAGLSERLGAEAADRRRREVGGVLRRELRLPDFVVPYG
                     VDEFAIVLPETDQNGARQSVTRIRDRLAAVPFEGDPREERPRFSAGIVTYPHPAAVQT
                     DDLFALVEAALVRGKAQSGERIGVAM"
     gene            9907..10791
                     /locus_tag="VGQ24_07435"
     CDS             9907..10791
                     /locus_tag="VGQ24_07435"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016888 - endodeoxyribonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HEV8454706.1"
                     /translation="MNRRSRTAERLGAHVSVQGGVDKAPVRGKAIGATAIQVFTKTPS
                     QWREPGVSSESYTTFRRECERYQLSNIVGHDSYLINLASPDPVLSSRSEAAFVAELQR
                     CEAFGIPLLVSHPGNYIDDRTAGLARNAAAYTRCLQGAPGTVVVLLETTAGCGTSLGS
                     SFEELALLRSLVGDEVRHRVAFCADTCHLYSAGYDLVGDYDGVWRRWDRILGLDQLRC
                     LHLNDSKTPFASCRDRHELIGEGSLGPAPFRRIMTDPRLAHVIKILETPKGDDQVTAD
                     RKMLRRLRRYARAGYAAR"
     gene            10824..11423
                     /locus_tag="VGQ24_07440"
     CDS             10824..11423
                     /locus_tag="VGQ24_07440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454707.1"
                     /translation="MRAAAALLVVLTTAGLSVAEAQTDFYARLGLTGATKLLKDDILQ
                     EVEVRQSLAPTLALGVSIPFTPLYGAGLEATVTSSGFHSTESGTKTDLGTLRTGSVML
                     GLDGPVWRRVRWRAGVGLLSYWPAEERGIFLRGGSTRFLVGAGLDYRQPVLPRWELMM
                     SLRYDFHRFTTDELVARGFSGTQGVQRVSASVGLARGRR"
     gene            11420..12091
                     /locus_tag="VGQ24_07445"
     CDS             11420..12091
                     /locus_tag="VGQ24_07445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454708.1"
                     /translation="MKLPDHLPILFGLGGAVAALACADIASPSRADRYEWRRIVNTGP
                     GTADTLSFHWPRSRLPVRVWVEDTLNLPSDAQGGIDRWKAAFLYGEFDAVIVPDSSTA
                     DVVVRAGSPVKGGFSVIRLASTAPECEGGTDFDLPGGSSEIQPPIRVFINPRFDPAIP
                     GVAECLALTTTHELGHAIGIFAHSPVATDIMFGDPVVSALSTRDRATAEAAYHLQSNL
                     SIGTR"
     gene            12129..13727
                     /locus_tag="VGQ24_07450"
     CDS             12129..13727
                     /locus_tag="VGQ24_07450"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: protein motif:HMM:NF006820.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004612 - phosphoenolpyruvate
                     carboxykinase (ATP) activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase"
                     /protein_id="HEV8454709.1"
                     /translation="MTIETTAVPRENLTLVEHGLFPIRIHANLTPPVLIEHALRRSEG
                     NVTDRGAFAAVTAPHTGRSAKDKFLVDEPGISDRIWWEKNARIDPAAFERLQEDVRAY
                     LDAREVFVQDLFAGADPAYRLSVRFVTPNAWHALFVRNMFIRALPAELAQFRPGFTVL
                     HAPDLQADPARHGTRSGTFVVISFTKNVVLIGGTRYAGEMKKSIFTALNYLLPARGVM
                     PMHCSANIGPSGDTAIFFGLSGTGKTTLSADPTRRLIGDDEHGWSDRGVFNFEGGCYA
                     KVIRLRADTEPEIYAATQMFGTVLENVVLDPVTRAVNFDADTITENTRACYPLQSIPN
                     HVPSGAGGHPGNVVFLAADAFGVMPPIARLTAEQAMYHFLSGYTAKVAGTERGVTEPT
                     ATFSACFGAPFLPLHPSVYAQMLGERIGRHGAKVWLVNTGWTGGPYGTGSRMKLSLTR
                     AMLRAALSGVLEGGRFIRDPVFGFEVPASVPEVPSDVLSPRGTWADPKAYDVQAGKLA
                     TMFRENFEQYRAQVPDAVAQAGPV"
     gene            13724..15133
                     /locus_tag="VGQ24_07455"
     CDS             13724..15133
                     /locus_tag="VGQ24_07455"
                     /inference="COORDINATES: protein motif:HMM:NF039904.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEV8454710.1"
                     /translation="MKRAAGRRGSGAAITQSGPGKAATSVSESADPSDARCSAAPLPR
                     RPAESEVIRDPLWDNIRVDHPALLALDTPAVQRLRYIRQVGHSFLVYPGATHTRFEHA
                     LGASHLTRRALAALEDLGELGPATEEECLAVRMAALLHDIGHYPFSHALEEAGFPSHE
                     TLGVAKLSQGLLGERLIQIGGLDFPRVVGALITGSSRSPLQGLISGSIDLDKIDYLSR
                     DARMCGVPYGTVDVDRLLSSLTLVEVEPGHCEVGVQEKGMSALESLLFAKYQMYRNVY
                     WHHAVRSATCMFKRAVRIAVRRGSVTVQAIADATDDGLMELLLTRDQSGLASSIRARR
                     LHKRALDLPASEVPGDVQPWVTSDPDLLERVEDAIAEEVGLAPGDVLLDFPARTAMLG
                     VDLPLRTRSGAIERLTDAGRAGHLGLPRVADELYRSARRLRIFVSSPPSRSLEPVLAV
                     LTWPADQVEARVAAAVSLI"
     gene            15146..15622
                     /locus_tag="VGQ24_07460"
     CDS             15146..15622
                     /locus_tag="VGQ24_07460"
                     /inference="COORDINATES: protein motif:HMM:NF016130.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HEV8454711.1"
                     /translation="MIDRRAFVIRLSGLVAAGVAGTRLAAEVPGSSAKPTPMTIYKRS
                     SCGCCAKWVDHVRDNGFEPTVRDEEDMDAIKTQLGVPEGVWSCHTALVGKYLIEGHVP
                     ASDIQRLVGQQPRVLGLAVPGMPSGTPGMAQPGAKIAGFEVVAFQLDGTTRTFARY"
     gene            15708..16247
                     /locus_tag="VGQ24_07465"
     CDS             15708..16247
                     /locus_tag="VGQ24_07465"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEV8454712.1"
                     /translation="MTERIATPHEIADPKPMVVPYREELRTAFEQLNRDWIESYFVLE
                     DADRAVFADPAGAILGPGGQIFFVVEGETVLGTCAVLRHGPTECEIAKMAVAPAARGR
                     GLGDLLMEAAVDFARQIGASRVSIVSNTVLGPALRLYRKHGFVEVPLESDGRYQRANI
                     RLERELGVREPVVRRGEGG"
     gene            complement(16210..16470)
                     /locus_tag="VGQ24_07470"
     CDS             complement(16210..16470)
                     /locus_tag="VGQ24_07470"
                     /inference="COORDINATES: protein motif:HMM:NF016141.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEV8454713.1"
                     /translation="MDILTWIIVGLVAGLLASLVMGGVGYGILGDIVLGILGALIGGW
                     LFARMGWGTPFSGLAGAIFVAFIGAIVLLVIIRLLRGARRAP"
     gene            complement(16544..17329)
                     /locus_tag="VGQ24_07475"
     CDS             complement(16544..17329)
                     /locus_tag="VGQ24_07475"
                     /inference="COORDINATES: protein motif:HMM:NF033484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HEV8454714.1"
                     /translation="MHFTCAARTDVGIVRSGNEDNYMMLAEQGIFIVADGMGGHAAGE
                     VASEMAVRITSQLIGSLRGSSDEEAGERIRNAIRAANDAIFERTLSEHDKRGMGTTVT
                     VLVLLPDRYLIGQVGDSRAYLFRDGSFHQLTKDHSYVQEQVDAGLLTPDQARVHPYSN
                     VITRCVGAGMDVVPDIYFGSLEKGDVLLLASDGLTGMLEDEQLTGIVSSDGGPQVWVD
                     RMVAEANRRGGLDNITAIVIRIDSVDSDTGEHPVMPAAASQRS"
     gene            complement(17339..18664)
                     /locus_tag="VGQ24_07480"
     CDS             complement(17339..18664)
                     /locus_tag="VGQ24_07480"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HEV8454715.1"
                     /translation="MIHLEIDGERHVIAAGDTVIGSASDNAVVLTGEGVHPRHAVVQG
                     APGAAAIRAAATGAEILVNGVRLGAEPTPLLHGDKIAIGTHELLVVDSARAGSTQLFD
                     SGAFADLVVPPVSPKAPGKTGGRLVCLTDGREYTVGEGSLTFGRDAGADVVVAGHDVS
                     RQHAEIRSDPEGYILIDTSVNGTYVNGERMGKTRRLSRADVIRIGNDEFRFYADSPPP
                     SPKSAPKMQAVEIPPSVPPAGASQRLSETMHGIPVTELQRQNTPPSPSAAPLASLLFR
                     SGDMKGRRLPIKVPVVNIGRGDYNDVVISDPSVSTMHAKLQRREAIWILTDLGSTNGT
                     FVEGEPLKGELPLSPGTTIRFGDVLALFEPLDDKVPAGRGAGTQVMSKMEAKPSAPAR
                     SEPAPEAERPRPRPRRPIRVAPQRPKAPSTLTVVGLVILVAILAYLLSS"
     gene            complement(18766..>19309)
                     /locus_tag="VGQ24_07485"
     CDS             complement(18766..>19309)
                     /locus_tag="VGQ24_07485"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEV8454716.1"
                     /translation="RQLSTSDLRSLIGFVQQDLFLFTGDILHNLTLDAPVSPQAAHEA
                     ARRVGADRFIERLPAGYAHRLGERGRSLSVGERQLLSFARALALDPRILVLDEATSSV
                     DAEAEAQIQRAIAELMTGRTSLVVAHRLSTILHADEILVLQHGEIRERGSHRELLGQE
                     GLYQRLYQLQLRGQEIRKIA"
BASE COUNT         3157 a         6380 c         6469 g         3303 t
ORIGIN      
        1 gtggagatcc cgcaggaggc gtttcttgct gtgctacagg tggactgagg aggtgagcgg
       61 tgagcagtga gcggtaagcg ggagaaactc gagacggcag tggaggcggt agacaacgtc
      121 cgcttaccgc ttaccgctga ccgctcacgc tgtttagtaa tccagaccgc cttcctcggc
      181 gacgtcatcc tgacgactcc actgctttcg gtgctcgccg accggcacgg cccggttgac
      241 gtggtgacca cgccggcggc cgcaagcctg ctggatcttc acccagcggt gcgcgatgtg
      301 gtccgctacg acaagcacgg cgtcggccgg ggctggaagc cgttccggcg gctgggcagg
      361 gagctgcgtg ccaggggtta tggccgggtg tacttaccgc atcggtcgct ccgctcggcg
      421 ctgctggccc tctggtccgg cgcgaaggag cggatcggct ttgccgacag ttccgccgct
      481 gtcacctata ccagccggat tccccggccc cggggcggcc atgaagtcga gcggctcctt
      541 gcgctggcgg gtgtgaagcc gggagatgct gccccgccgg tgagtctggg gctcgcgccc
      601 accgatctcg cggcggccga tgcctggctg gcatcacacg gcgtcggccc cgacttcgtg
      661 gcgatcgctc ctggctcggt ctgggccact aagcgctggc cctattacgc cgagctggcc
      721 gcggggctcc accggccagc ggtcatcgtg ggcagtgcgg aagacaccca gctcgccgat
      781 gccattgtcg aggccgctcg cgggcgggcg gtgagcgccg ccggcgcgct gacccttcgg
      841 gggtcggcag ctctgattcg gcgcgccgcg gtactggtca ccaacgactc ggcgcctctc
      901 catctggcga ccgcggtagg aacccccgtc gtggcggtgt ttggaccgac ggtgccgaag
      961 ttcggctttg ggccgcgccg caccggtgac atcgtactgg ggcacgacga gctgtcgtgc
     1021 cgcccgtgct cgacacacgg cccgccggcg tgtccgctcg ggcatcaccg ctgtatgcgc
     1081 gatctgtcgg caggcgaggt agcggcggca ttggccagga tcattggttc ggaggaaccg
     1141 cgtgcgattc gttctcggga ttgacatcgg tggcaccaac ctcgtcgtcg gcagtgtggc
     1201 cgaggacggt tccgcgttac acgcgctcgg aagcgagccg actcacgccg aggccggcca
     1261 gagcgacgtg ctcgaccgac tcatcacgtt ggccaagcga gccatcgacc agaccaggcg
     1321 cgaggtcccc ggcgcggaga tcatcggcat tggggtcggg gccccggggc cgctggatac
     1381 caagagcggg attgtgttgc tcacgcccaa tctcggctgg gtgaacttac cgctgcggcg
     1441 gatcattcac gagcgcctct cgttgcccgc ggcgctggac aacgacgcca attgcgccgt
     1501 tctgggcgag tggtggatgg gggccgcccg gggcacgaag atcgccatcg gtatcaccat
     1561 cggcaccggg atcggcggcg ggctcatcat caacggcaag ctgttccacg gcgcctccga
     1621 ctgcgcgggc gagatcggcc acaccaccat cgataccgag ggacggcgct gcaagtgcgg
     1681 caactatggc tgcctcgagg cctacgcctc cggacccaac atcgcgctcc gagcctgtga
     1741 ggagatccag gcgggcgcgg tcagccggct ggcctcatac gtcggcggcg acttgcggaa
     1801 gatcacggcg cagacggtct accaggctgc ccacgacggt gacgacctgg cgctcgaggt
     1861 ggtgaacgac acggccaagt tcctcggcgc cgccatcgcc aacctggtga acgtcttcaa
     1921 tcccgaagtg gtagtcatct gcggaggtgt gacgctggcc ggcgaccacc tgttcgtgcc
     1981 gcttcggcgc gaggtcgccc gacgggcatt caagccggcc gtgagtgtct gccgcatcgt
     2041 gccgtgcgag ctgaccggca cggccggtgt ctacggcgcg gccaaggtgt tcctggatac
     2101 agcgggacgg cggggcagcg gggcagcggg gcaggcagcc tcgtagcatg cggatcggca
     2161 tcctcggttc tttggtctgg gacctcatat atggccgcga ccaactcgcc cctccggtgg
     2221 aggagtgggg aggcatcgcg tacgccctcg cgggcctgga cgccagtctc ccgccagact
     2281 gggagatcgt tccgctgatc aaagtgggcc gcgacctgag cgcggaagcc caggaactcc
     2341 tgcgtggctt gtcccggctc gcccccggcg cgcgttgcgc cgaggtcacg gcgcccaaca
     2401 accgcgtggt gctgcactat cagtccaccg agcgacggtg cgaacgaatg gccggaggcg
     2461 tccccggctg gacctgggct gagctgggtc ccatggtgca ggacctggac gcgatttatg
     2521 tgaacttcat ctcgggattc gagctctgcc tgggaaccgc gcaggctctg cggcaagggt
     2581 ttgccggacc aatctacgcc gatctccaca gcctgttcct gggaatgcag caggacggca
     2641 tgcgggtgct tcaaccactg tcgaactcgc ctgcctggtt cggctgcttt gacatggttc
     2701 agctcaacga agacgagatg cagcagctca cgctcgaccc gttgacgttg gctgccgacg
     2761 ctctgggcgc cggggtctcg ctgctcacgg tgacgctggg gcctcgcgga gtggcatatg
     2821 tggccgcgcc ggggtttgat ggattggcgg ggaagcgggg acgcggggaa gcggggacga
     2881 accagcgacc cagcagcgct catgcatacg acctgacttc cccgcctccc cgcttccccg
     2941 ccccactatc ggtgcgcacg gcgttgatct cagcgccccc gaccgagacc ctcgacccca
     3001 ccggctgcgg cgacgtcttc ggagccgtgg cctttgcccg gctgctcgcc ggggattccg
     3061 tggaggctgc gctgcgccat gcgacggcgc tcgccgcaag aaatgccggc tttcgcggcg
     3121 ccggcgggct ggcccgccat ctccgtggcg agctggtgac gccgtgaccc gggtcatcga
     3181 ggttcccgcc cacttcgacg atcgcagctt tgacgccttt gccggcggat tcggcgagtg
     3241 gcctccggat gaaaagatgc tgctggacgc ccgaagcacc cagtgggcgt ccccctatgg
     3301 gctgatcggg ctcctgacgg ccgggcaagc gctggccgag gcgaagcggg aaaggccatt
     3361 gctgacggtg cctaccagcg acgaggtgaa gcgatactgg gctcgcgccg gattctttcg
     3421 tcacgccgcg gagctgttcg agctgcacgg caaggtgcca cgcgccacga cgaccgggcc
     3481 ctcggacgtg ctgctcgacg tcacgccggt acgcgcgtcg gaggacgtcc acggcgtggt
     3541 cgacaagatc tccgagggcg cctcccggat tttacacggc gagctgggtc tcgaaatgaa
     3601 ggccacgctc cgcttcagta tggcgctttc agaggcctgc cagaatattg tggagcacgc
     3661 ggggaccagc ggctgggttg cggtccaggc gtataccttc cgccgtcgtc tcggtcgcag
     3721 ggtggtggtc atcgccgtga gcgacggggg ggtgggattc cgccgttcgc tcgaaagcac
     3781 ccacgccaaa cggttcggcg agcggtgggg tgacggcgcg gcgctcgagg ccgcgctcat
     3841 ccaaggcgtg agccgtttcc gcgacccggg ccggggccag ggcctcgcgt tcatcaagcg
     3901 atttcttgac caatgggagg ggaagatctc catccgcagc ggcaccgccc ggctgtccat
     3961 catcccaccc tgggatgagg acgtgcccct cagcgagaac ctggcgtatt ttccgggtgc
     4021 acaagtgcag atcatcatcc cggcgcaggg cgcggagtcg cggtgatcca gacgatccgg
     4081 atcggacacc tgctccgcga ggctgtggcc gcgccatacc gcaacctggt cacccgcccc
     4141 accggcgccg ccgtccgcac ccggatagag gaagcgctgg ccggatccaa ctgcatgacc
     4201 gccctactgg acttctccgg aatcgagctc gtggacctga gctgcgccga cgaggtcgtc
     4261 gccaagctac ttctggcggt gcgtaccgcc tatttcgtgg tactccaggg tcttcgggaa
     4321 gatcatcacg aggcgatcga gcatgtcctc gtccatcatc gcttggcagt ggccgcgatg
     4381 ccgccggaca gccgggatcc aaggctcctg ggctgggtcc gggccgatgc caggcgggcg
     4441 ttcgcctgcg tgtgcgacca tggtcctctc gccgtgcccg acctctgtgg cgtcctgatg
     4501 tggccggagc ctcgcgggcg tgaggcgctg cacgatctcg ccattcaccg actggtccgc
     4561 ccgatcggcg agctctatca tccgctgccg accgcatgag ccggtccggc tttgggttct
     4621 ccacgaccgc tattcacggc acaccgcacc gccggccaga ctgggcaccg gttgcccctg
     4681 ccctgctcca gagcagcacc ttcgtcaacc cgatcggatc ggacgaggag gtgctctaca
     4741 gccgctacgg caacaacccg aaccaggtcg agttggcccg gaagtacgcg ctgctcgagg
     4801 gtgcggagga cgcgatcttc gtggcaagcg gcatgggcgc caccgcactc gctcaccttg
     4861 ccatgctccg ccccggcgat catctgatcg cgagcacctg gatctacggc ggcacccagc
     4921 gcctcttcga cgaggagttg gcccggttcg gcatcgaggt cacctatgtg agcccggacc
     4981 aagtgcggca ttggcgcaag tcgctgcgca aggccacccg ggccatcttc gtggagacgc
     5041 ctaccaaccc gctcatgcgg gttatcgacc tgggccccat ctcgtacctc gccaaggagc
     5101 acggcctggc gcttctggtg gatgccacct tcgccagccc gatcaactac cggccgctgg
     5161 agcacggtgc ggacgtcgtc atcaccagcg ccaccaagta cctcaacggg cacagcgacg
     5221 tgatcgccgg cgtggtggcg ggctcgagtg cattcgtgga ggaggtgaac cggctcatgc
     5281 ggctctgggg ccaggccatc gatccccacg cggcctggct catcgaccgg gggatgcgca
     5341 ccctcgccgt gcgcatggag cgccacaacg ccaacgggat ggctgtcgcg cagtgggcgg
     5401 agcagcaccc cggcattgcc aaggtccact accccggact gccgtcgcac ccggaccacg
     5461 cgcacgccaa gaccgtgctc aacggcttcg gcgggatggt ggggctcgag ctcaaaggcg
     5521 gcgccaaggc ggcggaacgg ctgctcaaac ggctcaagtt gatcacccac gcaccgagcc
     5581 tggccggcgt ggagacgctc gtctcggagc cacggctcac atcgcacaag agcatcggct
     5641 cggagggacg ggccaagatc ggcatcccgg acggcttcct gcgtctgagc tgtggcctcg
     5701 aggacgcggc ggatattatc ggggatctgg agcaggcgat cggcaagtga gaggtaagaa
     5761 gtaagaggtg agaggggcga cgccttgccg tccctctcac ttctcacctc taacctctca
     5821 ccttattatc cccacgtgat ccgcttttcc aacgtttaca aagcctatcc caacggtgcg
     5881 atggccctca aggacgtgag ctttcacgtc tccaagggag agtttgtctt cctcaccggc
     5941 cactcgggcg ccggcaagtc caccatcatg aaggtgctct tcgcggagca gcggccgagc
     6001 ggcggggagg tacgggtctc gggttacaac gtcaccaccc tccgccccga cgacgtgccc
     6061 aggctccggc gcaggctcgg cgtcgtgttc caggactttc gtcttctgga ggaccgcacg
     6121 gccgcggaga acatcgcctt tgccctcgag gtgaccggag cacgcaccga caccattgcc
     6181 gcccgggtaa tgcgggtcct gacccaggtc gggctctcgt cgaaggccag ggcgtatccg
     6241 cgcgagctct cgggcgggga acagcagcgg gtggccatcg cgcgagccct ggtgaacgat
     6301 ccggcgatcc tgctggccga cgagccaacg gggaacctcg acgagcgggc cactcgcggc
     6361 gtcttccagc tgctgcgcga catcaacgcc ggcggcaccg ttgtcgtcat ggccacccac
     6421 gacctcgacc tggtgcggca gacggcgtac cggatcatcg agatgcgcga cggcagcctg
     6481 gtgtatgaca gtgcggtgga cgaggccgcc gcggaggcac agtgaagctc ctgagccgcg
     6541 aagcgctgct ttccttccgc cgggctccgc ttctgtcggt gctctcggta accacaatcg
     6601 ctttctcgct cttcaccgtg gggctgttcg gcctggtcgc gatcaacctg cgccaggcgc
     6661 tccgtgggat tgaggagcgg gtcgagatcg tggcctacat cctccggggc acgccggcgg
     6721 aaacgatcgc gatcgccagc caggatattg cggcgtttcc cgagatccag gaggtcaact
     6781 acgtgaccga ggaacaggcc cttcagcgcg ctcgcgccga gttggtcgag ttccgcgacg
     6841 cctaccgcga cctccaggtg aatccgcttc cggcctcgat cgaggtgcgg ctcaaggacg
     6901 gctatcgcga cgcggccagc gctgaacggg tggcccagcg gctccagggg ttcggcttca
     6961 tcgaagacgt gcgcttcggc cgggagtggg tgcagaagct cgatcacctg agaaatctca
     7021 ccggactggt cggcctggtc atcggcctgg cgttcgccgc cgtggcggtg gtcatcatcg
     7081 gggtcaccat ccgactcacg atcctccagc gagcgaggga gatctccatc atgcgcctgg
     7141 tcggggccac aaactggttc atccgcggcc cgtttctgct cgaaggcgcc ttgaaggggc
     7201 tgctcggtgg actcctgtct ctggtgttgt gttacgcggg ctacctgttg ttccgggaca
     7261 agagcggcgg gaccctggca ggcctcatct tcttccgtcc cgagcacatg gtgttgatca
     7321 tcgtgttcgg cgtgctgctc ggcctcggcg gcagcctggt gagcgtcggg cgacacctca
     7381 ggcatgtgta ggcagggcgg cggggcagcg gggcggcggg gcagtctgtt caatgctcta
     7441 ctaatactcc gatttgccgg tgctgccctc ctgccccgct gccccgctgc cccactcggc
     7501 gcgctcgtga tcttcatcct gtcggcgact tccgcgcacg cccagggaac gccggacctg
     7561 gaggagtccc ggcgccgatt ggaggaaatc cgggcggagc gggatcgcct gcaacggcag
     7621 cgcgagcggc ttcaggggca ggtgcacgac gtcaacgacg agctgagcaa tctcgagcgt
     7681 cagcgggagt cgacccagag gatcgtcaat gagatcgagc ggcagatcgg ggggcttgca
     7741 tcacagctcg accgatccag cgccgagctg atcctggccc aggacaatct cgccgagcgg
     7801 cgagcggtgc tccagcggcg tctggtggac atctacaagc gggggaatct ccacaccttt
     7861 caagtcctgc ttgctgccga gtccttcggc gatcttctga gccgctacaa gtatctgtat
     7921 ctcaccagtg agcaggaccg ctcgctggtc accgacgtcg agaagctgcg gaaccgggtg
     7981 gtccagcagc ggaacaacat cctgaacgtc cggggcgagc tggatcgcag gcgggaggag
     8041 cgagaggccg aggccagcaa gtactcggag ctggcctccg agcgagccag gaagctgcag
     8101 agcctgcggc gctcggcccg gagcaccgag cggcggctca ccgagctcca gaaagacgag
     8161 tcacggctga atgggctcct ggcctcgctc gagcgggccc gccgggatga actggcccgc
     8221 ggggcgctgc gcggcggcgt cagtgcgccc ggctccatca cgaccgcgga tctgggcaag
     8281 ctcgactggc cggtcgaggg aaccattgtc tatcggtttg gtcgggacac gcttccgagt
     8341 ggcggcatca ttcggtggaa cggcgtcggc atcgcggcgc cggtcggcac gccagtcaag
     8401 gcagtggagg ccggcaaggt gcggctggtc ggtcaattcg gaacctacgg gctcaccatc
     8461 gtcctggagc atggcaacgg atactactcc gtgtattccc acctcgagac agccgatgtc
     8521 aagctggggg cctcggtctc gaagggcggc gcgatcggaa cggtgggcgg tctgaactcg
     8581 gactacggcc cgcatctgca tttcgagatc aggggtgaca aacagatcgc gctggacccg
     8641 acgatgtggc ttcggcggag gtgaggcagc ggggcagcgg ggcggcgggg cagttatccg
     8701 agaagtaacg tcaagcgcgt gtgcggggca tggctgtggc tttcccttcg agtgctctat
     8761 agaggcccca tggcaagaac cagatcgtgg cacgctgccc atgacttgag ccgctcgtgg
     8821 cgctttccat tggtcgaact ctccgtagcc ggtcccatgc agcaactgta gtgaattctc
     8881 ttcactgttt gcgtatcaaa ttcgcgctaa ccgaaccagt gcgcggcaga gatgttgctg
     8941 ccccgctgca cgctgccccg ccgccccgcc gccccgctta cattgccacc ccgatccgct
     9001 cgccggactg cgccttcccg cgcaccaggg cagcctcgac cagggcaaac aggtcgtcgg
     9061 tctggacggc ggcggggtgg ggataggtta caatgccagc gctgaatcgg ggacgttcct
     9121 ctcgggggtc gccctcgaag ggcaccgcgg ccagacggtc acggatccgg gtgacggact
     9181 ggcgggcgcc gttctggtcg gtctcaggca ggacgatcgc aaactcgtcg acaccatagg
     9241 gcacgacgaa atcgggcaga cgcagctccc ggcgtagaac gccaccgacc tcgcgtcgcc
     9301 tgcgatctgc ggcctctgct cccagccgtt cgctcaatcc agccagctcg tccatgccga
     9361 gcaggacgag gctgaagctc agcgaatacc gccgggcccg ctcgagctcc tcctgaactc
     9421 gtcggtcgag cgcatcttcc gtctcatcct catctggccc ggtgagaaca gcagcagggc
     9481 tcggctcggg gccgttgagc aatggagcgc tggcctcacg gatccgcgcg tgcagacgag
     9541 cgcagagttc gggcaagtgg atcggagccg ccagcgcatc tgcggctccc tgaaccagcg
     9601 ccgcaacggg cccatcagga tcggaggcgg agaggaggac gatgcggggc ggaatggggg
     9661 acgtgtcagc gctgccgggg ggaacgaggt cggcaagtgg ctcgccgtcc accttggtga
     9721 gggttatcag aaccgcgtcg gcctggagct ccgtggccgc gtcttcctgc tccacgagct
     9781 gaaagccggc gcgggtgagc gcccgttcca gccctgccgg ccgggccgac gcatccccca
     9841 cgaggagcac tttcgggcga gcgggctgcg ccagtgcttc caccatcagg cggtagaggg
     9901 aagcggatga accgtcgtag tcgtacagca gagcgtctgg gagcccatgt gtcagtccag
     9961 ggcggcgtcg ataaggcgcc ggtcagaggc aaagcgatcg gggcgaccgc gatccaagtg
    10021 tttaccaaga cgcccagtca gtggcgtgag ccgggcgtct catccgaatc gtataccacg
    10081 ttccgccggg aatgtgagcg gtatcagcta tccaatatag tggggcatga ttcgtacctt
    10141 atcaaccttg cctcgccgga tcctgtgtta agtagccgct ccgaggcggc tttcgtggcg
    10201 gagcttcagc gttgcgaggc attcggcatc ccgctgctgg tgtcgcaccc gggcaactac
    10261 atcgacgacc gaaccgccgg cttggcgcgc aacgccgctg cctacacccg ctgcctccag
    10321 ggggcgcccg gcacggttgt cgtgcttctc gagaccacgg cgggctgtgg cacatccctc
    10381 gggagctcct tcgaggagct cgccctgctg cgcagcctgg tcggagatga ggtccgccat
    10441 cgggtggcct tctgcgccga cacctgccat ctctactcgg caggctacga cctggtgggt
    10501 gattacgacg gcgtctggcg gcgctgggat aggatcctcg ggctggacca acttcgttgc
    10561 ctgcatctga acgattcgaa gacacctttt gcatcctgcc gcgaccggca cgagctgatc
    10621 ggcgaaggat cgctcggtcc ggcgccattt cgccggatca tgaccgaccc ccggctggcc
    10681 cacgtgatca agatcctgga gactcccaag ggcgatgacc aggtgacagc cgaccggaag
    10741 atgctccggc ggctgaggag gtacgcccgg gcggggtacg ccgcgcgttg acccggtctc
    10801 cttccccgct cataatttcg ggggtgcgag ccgccgcggc cctcctggtc gtcctcacca
    10861 ccgccggcct atcggtcgcg gaggcgcaaa cggatttcta tgcccgcttg ggcctcaccg
    10921 gtgccaccaa actcctgaaa gacgatatcc tgcaggaagt cgaggttcga cagagccttg
    10981 cccccaccct ggcgttgggc gtctccattc cgttcacgcc gttatacggg gccggtctcg
    11041 aggccaccgt gacctcatcc ggattccaca gtaccgaaag cggcaccaag acggacctcg
    11101 gcacgctccg caccggctcg gtcatgctgg ggctcgatgg tccggtctgg cgccgggtgc
    11161 gctggcgggc gggcgtgggt ctgcttagtt actggccggc ggaggagcgc ggcattttcc
    11221 tgaggggcgg gagcactcgg tttctggttg gagccggact ggactaccgg cagcccgtat
    11281 taccacgctg ggagctgatg atgtccttgc gatatgactt tcaccgcttc accaccgacg
    11341 agctggtggc ccgtggcttc agtggaaccc agggggtgca gcgggtgtcg gcctcggtag
    11401 gtctggccag aggccgacga tgaagcttcc cgatcatctg ccgatacttt ttggcctggg
    11461 tggggccgtg gccgcgctgg cctgtgccga catcgcatct cccagtcgcg ccgacaggta
    11521 cgagtggcgg cgcatcgtca atacgggccc gggcacggcc gataccctca gctttcactg
    11581 gccaagatcc cgcttgccgg tcagggtctg ggttgaggac acgctgaacc ttccgagcga
    11641 tgcgcaaggc ggcatagacc gctggaaggc cgcttttctg tacggtgagt tcgacgccgt
    11701 cattgtgcct gactccagca ccgccgacgt ggtggtacgg gcggggagcc cggtcaaagg
    11761 cgggttcagc gtgatccggc tcgcgagcac cgctccggag tgcgagggcg gtaccgactt
    11821 cgacttgccg ggcgggagca gcgagatcca gccgcccatc cgggttttca tcaatccgcg
    11881 gttcgatcct gccatccccg gggtggctga gtgcctggcc ttgaccacga cgcacgagtt
    11941 gggacacgcc atcggcatct tcgcgcattc gccggtagcc accgacatca tgttcggcga
    12001 tccggttgtg tcggcgctca gcaccaggga tcgcgcgacg gcagaggcag cataccactt
    12061 gcagtccaat ctttcgatcg gaacacgctg aggttgcacg cccacgcgga gctagggatc
    12121 ttacagatat gaccatcgaa accaccgccg ttccgcgcga aaacctcacc ctcgtcgagc
    12181 atggtctgtt ccccattcgc attcacgcga acctgactcc cccggtgctg atcgagcatg
    12241 cactccggcg gagcgaaggc aacgtgaccg accggggggc gttcgcggcg gtgaccgcac
    12301 cccacaccgg ccggtcggca aaagacaagt tcctggtcga tgagccgggc atcagcgacc
    12361 ggatctggtg ggagaagaac gcccggatcg atccggcggc gttcgagcgg ctgcaggagg
    12421 acgtgcgagc ctatctcgac gcccgcgaag tgttcgtaca ggatctcttc gccggcgccg
    12481 atccggccta ccggctgtcg gtccggttcg tcacgcccaa cgcgtggcac gcgctgttcg
    12541 tgcggaacat gttcatccgc gcactcccgg ccgagctggc tcagttccgg cccggtttca
    12601 cggtgctcca cgcgcccgac ctccaggccg atcccgcccg ccacggaacc cgcagcggaa
    12661 ccttcgtggt catcagcttc accaagaacg tcgtgttgat cggtggcacc cgatacgcgg
    12721 gagagatgaa gaaatccatc tttaccgcgc tcaattattt gctgccggcc cggggagtca
    12781 tgccgatgca ctgctcggcc aacatcggcc ctagcggcga cacggcgatc ttcttcggtc
    12841 tctccggcac cggcaagacg acgctctcgg ccgatcccac ccggcggctc atcggcgatg
    12901 acgagcacgg ctggagcgac cggggggtgt tcaacttcga ggggggctgt tacgcgaagg
    12961 tgatccggct ccgcgccgac accgagcccg agatctatgc cgctacacag atgttcggga
    13021 cggttctcga aaatgtggtg ctcgaccccg tcactcgggc agtcaacttc gacgccgaca
    13081 ccatcaccga gaatacccgg gcctgttacc cgcttcagtc gatccccaac cacgtcccga
    13141 gcggcgccgg tggccatcct ggaaatgtgg tgttcctcgc ggctgacgct ttcggcgtga
    13201 tgccgccgat cgcgcgactc acggccgagc aggcgatgta ccacttcctc tcggggtaca
    13261 ccgccaaggt cgccggcacc gagcgcgggg tcaccgagcc cacggccacg ttctccgcct
    13321 gcttcggcgc gccctttctg ccgctgcatc cgagtgtcta cgcgcagatg ctgggtgagc
    13381 ggatcggccg tcacggggcg aaggtgtggc tggtgaacac cggctggacc ggaggcccct
    13441 atggcaccgg ctcgcggatg aagttgtcac ttacccgggc catgctgcgc gcggcactgt
    13501 caggggtgct cgagggtggc aggttcatcc gcgacccggt cttcgggttt gaggtgccgg
    13561 cgagcgtacc cgaggtaccc tcagacgttc tatcgccgcg gggtacctgg gccgatccga
    13621 aggcctatga cgtccaggcc gggaagctgg ccacgatgtt ccgggaaaac ttcgagcagt
    13681 accgggcgca ggtgccggac gctgtggccc aggcgggacc ggtgtgaagc gggcagcggg
    13741 gcggcggggc agcggggcag caataactca gtcgggacct ggtaaggcgg caactagcgt
    13801 aagtgaatcg gctgacccgt ccgacgcgcg ctgctccgcc gccccgctgc cccgccgccc
    13861 cgccgaaagc gaagtcatcc gcgaccctct ctgggacaac atccgagtcg accaccctgc
    13921 cctgcttgcc ctcgacacgc ccgcggtcca gcgccttcgc tacattcgtc aggtcggtca
    13981 ttcctttctg gtgtatcccg gcgccactca cactcgtttc gagcacgcgc tcggcgcctc
    14041 tcacctgacg cggcgagcgc tcgccgccct cgaggacctc ggcgagttgg gccctgctac
    14101 cgaggaggag tgcctggccg tccgcatggc cgcgttgctg cacgacatcg gccactaccc
    14161 gttctcgcat gcgctggaag aggcaggctt tccgtcgcac gagacgctgg gcgtcgccaa
    14221 gctctcgcag ggactgctgg gcgagcgttt gatccagatc ggtggcctcg attttccccg
    14281 cgtcgtgggt gccctgatca ccggctcgag ccggagtcca ctccagggac tcatctccgg
    14341 atcgatcgat ctcgacaaga tcgattatct gagccgggac gcccggatgt gcggcgtgcc
    14401 atatggcacc gtggacgtgg accggctgct ctcgtcgctc accttggtcg aggtcgagcc
    14461 cgggcattgc gaggtggggg tgcaggaaaa ggggatgagc gcgctggagt cgctcctgtt
    14521 cgccaagtac cagatgtacc ggaatgtcta ctggcaccac gccgtgcggt cggcaacctg
    14581 catgttcaag cgggcggtgc gcatagccgt gcggcgcgga agcgtgacgg tgcaggccat
    14641 cgccgatgcc accgacgacg ggctgatgga gctgctcctc acccgggacc agagcggact
    14701 cgcctcctcc atccgggcac gccgcctgca caagcgcgca ctggacctgc cggcaagcga
    14761 agtccccgga gacgttcagc cctgggtgac cagcgaccct gatctgctcg agcgggtgga
    14821 ggatgccatt gccgaggagg tcgggttggc gcctggcgac gtgctgctcg actttccagc
    14881 ccggaccgcg atgctcggtg tcgaccttcc gctccgcacc cgcagcggcg ccatcgaacg
    14941 gctgaccgat gccggtcgag ccgggcacct gggacttccc cgggtggcgg acgagctgta
    15001 ccggagcgcg cgccgtctgc gcatctttgt gtcgagtccg ccgagccgct cgctcgagcc
    15061 cgtgctggcc gtcctgacgt ggcccgcgga ccaggtcgaa gcgcgagtgg cggcggcagt
    15121 atctctcatc tgacagagga cagcaatgat cgaccgacgc gcgttcgtga ttcgtctctc
    15181 cgggctggtg gctgcgggag tggccggcac ccggctcgcc gctgaggtcc cgggctcgtc
    15241 cgccaagccg acgccgatga ccatctacaa gcgcagcagc tgcggatgct gtgccaagtg
    15301 ggtggaccac gtgcgggaca acggcttcga gccaaccgtg cgtgacgaag aagacatgga
    15361 cgccatcaag actcagctcg gcgtcccgga gggggtgtgg tcctgccaca cggccctggt
    15421 gggcaagtac ctcatcgaag ggcacgttcc cgcgtccgac atccagcgtc tggtggggca
    15481 gcaacccaga gttctcggcc tcgccgtacc cggtatgcct tcaggcacac cggggatggc
    15541 tcagccggga gcgaagattg cggggttcga agtggtcgcg ttccagctgg atggaaccac
    15601 gagaacgttc gcccgttact agcccgaagc cgctcggagt gcccggctac tgcggaggga
    15661 tggtgagggt cgcaaggatc accagggcaa ccagctgaga agaacggatg accgaacgca
    15721 tagcgactcc tcacgagatt gccgatccga agcccatggt ggtcccctac cgagaggagc
    15781 tccggaccgc attcgagcag ctgaaccggg actggatcga gagctacttc gtcttggagg
    15841 atgcggatcg ggcggtcttc gctgatcccg ccggcgccat acttggccct ggcggccaga
    15901 tcttcttcgt ggtcgaaggc gagactgtgc tcggcacctg tgccgtgctc cggcacggtc
    15961 ccactgaatg cgagatcgcc aagatggccg tggcaccggc tgcccgcggg cgcgggctcg
    16021 gggatctgct gatggaagcg gccgttgatt tcgcccggca gatcggcgcg agccgggtat
    16081 ccatcgtctc caacacagtg ctagggcctg ccctccggct ttaccggaag catggcttcg
    16141 tcgaggttcc gttggagtcc gacgggcgtt accagcgggc caatatacgc ctggagcgcg
    16201 agctcggagt cagggagccc gtcgtgcgcc gcggagaagg cggatgatga ccagcagcac
    16261 tatagccccg atgaacgcga cgaagatcgc gcctgccagc ccggaaaacg gcgttcccca
    16321 ccccatccgg gcgaagagcc accctccgat gagcgcgccg agaataccaa gcacgatgtc
    16381 acccagaatg ccgtagccga ccccacccat gaccagggac gccagcaacc ctgcaaccag
    16441 cccgacgatg atccaggtca gtatgtccac acgccctcct cgttgttcga aagccgctga
    16501 atgcttccat cctgctggcg agcgagggta gctcgaagga gcctcaggag cgctgactgg
    16561 ccgcggcggg catgaccgga tgctcccccg tgtcgctgtc caccgaatcg atccggatca
    16621 cgattgccgt gatgttgtcg agcccgcccc tccggttggc ctccgccacc attcgatcga
    16681 cccacacttg tggtcccccg tcggagctta caataccggt gagctgctcg tcttccagca
    16741 ttccggtgag accgtccgag gccagcagga gaacgtcccc cttctccagt gacccgaagt
    16801 agatatccgg caccacatcc atcccggcac cgacacagcg ggtgatcacg ttgctgtagg
    16861 gatggacccg ggcctggtcc ggagtgagga gtcccgcatc gacctgctcc tgaacgtacg
    16921 agtggtcctt ggtcagctgg tggaagctcc cgtcccgaaa gaggtaagcc ctgctgtcac
    16981 ccacctggcc gatgagataa cgatccggca acagcacgag gacggtcacc gtcgtgccca
    17041 tccctcgctt gtcgtgctcc gacagggtgc gctcgaagat ggcatcgttg gccgcgcgga
    17101 tggcgttgcg gatgcgttcg ccggcttcct cgtcactgga tccgcggagc gagccgatca
    17161 gctgggaggt gatccgcacg gccatctcgc tcgccacctc gccggccgca tgaccgccca
    17221 tcccatcggc gacgatgaag atgccttgct cggccagcat catgtagttg tcttcgttgc
    17281 ccgaacggac gatgccgacg tcggtgcgag cggcgcaggt gaagtgcacg agaatccgtc
    17341 agctcgagag caggtacgcc aggatggcta ccaggattac caacccgacc accgtgaggg
    17401 tagagggagc cttggggcgt tgtggggcga cgcgaatggg ccggcgcggc cgtggcctcg
    17461 gccgttccgc ttcgggtgcc ggctcactcc gagccggtgc ggagggtttc gcctccatct
    17521 tgctcatgac ctgggtgccc gcaccccgcc ccgccggaac cttgtcgtcg agcggctcga
    17581 atagcgccag gacgtctccg aagcggatgg tggtgccagg actcagcggc agctcgccct
    17641 tcagcggctc gccctcgacg aaggtgccat tggtcgagcc cagatcagtc aggatccaga
    17701 tcgcctcgcg gcgctggagc ttggcgtgca tggtgctcac gctcgggtcc gaaatgacca
    17761 cgtcgttgta gtctccccgc ccgatattca ccaccggtac cttgatcggc agccgccggc
    17821 ccttcatgtc cccgcttcga aacagcagcg acgccagggg tgcggcgctg ggcgatgggg
    17881 gcgtgttctg ccgctggagc tctgtgactg ggattccgtg catggtctcc gagagacgct
    17941 gggacgcgcc ggcgggtggc acgctgggag gaatctcgac cgcctgcatc ttcggagccg
    18001 acttgggcga gggcggcggc gaatccgcat agaagcggaa ctcgtcgttc ccgatccgga
    18061 tcacgtcggc tcgggagagg cgccgcgtct tccccatccg ctcgccgttc acataggtgc
    18121 cgttcacact ggtgtcgatg aggatgtatc cctccgggtc cgaccggatc tcggcatgct
    18181 ggcgcgacac gtcatgcccc gcgaccacga catcggcccc ggcgtcccgg ccgaacgtga
    18241 gtgacccctc gccaacggtg tattccctgc cgtccgtgag acagaccagc cggcctcccg
    18301 ttttcccggg cgccttggga gagaccggag ggacgaccag atccgcgaag gcgccggagt
    18361 cgaagagttg ggtgctgccg gcccgggcgg aatccaccac gagcagctcg tgcgtcccga
    18421 tcgcgatctt gtcaccatgg aggagcgggg tcggttcggc acccagccga actccattga
    18481 cgaggatctc ggccccggtc gcggcggcgc gtattgccgc ggcaccggga gcgccctgca
    18541 cgaccgcgtg cctggggtgc acaccctcgc cggtgagcac cacagcattg tccgaggccg
    18601 accctatgac tgtatcaccg gcggcgatga cgtgccgctc gccgtcgatt tcgagatgga
    18661 tcatcgattg atcccgagga aaatcgagtg gggagaaacg tatccgctga cttataacct
    18721 ggcaagcgaa atatggttag ccccgccctc atgggcgggg ccgtcctatg cgattttgcg
    18781 gatctcctgc ccccgcaact gcagctggta cagccgctgg tacaaccctt cctggcccag
    18841 gagctcacgg tggcttcccc gctccctgat ctcaccgtgc tgcaagacca ggatctcgtc
    18901 ggcgtgaagg atggtactca gccgatgggc caccacgaga ctggtccgtc ccgtcatcag
    18961 ctcggcgatg gcccgctgga tctgcgcctc tgcctctgcg tcaactgagc tcgtggcctc
    19021 gtccagcacc aggatccgcg ggtccagcgc caaggctcgc gcgaagctga gcagttgccg
    19081 ctcaccaacg ctcaggctcc gaccgcgctc tccgagccgg tgagcgtagc ccgccggcaa
    19141 ccgctcaatg aagcggtcgg cgccaacccg gcgggccgcc tcgtgagcgg cctgcggcga
    19201 gaccggagcg tccagcgtca ggttgtgcag gatgtcgccc gtgaagagga agaggtcctg
    19261 ctgcacgaag cctatcagcg accgcagatc cgacgtgctc agctgccga
//
LOCUS       DASYRV010000285         1518 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_526940, whole genome shotgun sequence.
ACCESSION   DASYRV010000285 DASYRV010000000
VERSION     DASYRV010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_526940"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            118..621
                     /locus_tag="VGQ24_07490"
     CDS             118..621
                     /locus_tag="VGQ24_07490"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEV8454717.1"
                     /translation="MRPSGTPAQLEKRRRTAVQLLRGGRTLAAVAGQIHASVSSVFRW
                     WQVYQREGRRGLRAKPAPGRPPGLSPVQRGKLVQLLVKGPLRAGYRTDLWTLARVAAL
                     IHREFGIRYHPGHVWKLLTSLGWSCQKPERRAVERDEAAIARWKHNEWPRIKKRRSTW
                     RPSRLRR"
     gene            638..1135
                     /locus_tag="VGQ24_07495"
     CDS             638..1135
                     /locus_tag="VGQ24_07495"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEV8454718.1"
                     /translation="MPNVCRTWAPKGQTPCLLHRYRHDRLSVCSGLAVSPKRRRLALY
                     LRCRPRNLSGLDIRAFLQHLLRHLRGPVDLLWDRGPIHRRREVRAFLAAHPRLHVHYF
                     PAYAPELNPAEYVWARTDRALANGAPDDLADLRQRLDSTVRRLRRSQLLLWSCIYASD
                     LPWTR"
     gene            complement(1161..>1518)
                     /locus_tag="VGQ24_07500"
     CDS             complement(1161..>1518)
                     /locus_tag="VGQ24_07500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454719.1"
                     /translation="IDPEHHRAFLACEGNDTLAVFDLDTHRAIAHLPMAKGADVVMFD
                     AGLGRIYAACSSGAISVFQMDDPAHFRKLQDFPVEPKIHSLAVDARTHRVYAPAEQEK
                     GRPASKMFVFEAVTNY"
BASE COUNT          249 a          498 c          482 g          289 t
ORIGIN      
        1 gtgaagatga ccagatcgtt cctgtcaaag actcggcgaa gaagtcggcc aggctgatta
       61 ttgactctcg cataaataat ggaaagattg taggctcacc ggtggatcgt atgaggcatg
      121 agaccttctg gtactcccgc gcagctggag aagcgccgtc gcactgcggt tcagctcctg
      181 aggggtggcc ggacgctggc ggcggtggcc ggccagatcc atgcctcggt gagttcggtg
      241 tttcgctggt ggcaggtgta tcaacgcgag ggccggcgtg ggctgcgcgc caagccggcc
      301 ccgggacggc cgcccgggtt gtccccagtc cagagaggca agctggtgca actgctggtg
      361 aagggcccgc tccgggccgg ctaccgtacc gatctctgga ccttggcacg cgtggccgcc
      421 ctgatccacc gggagttcgg cattcgctat catcccggcc acgtctggaa gctgctgacc
      481 agcctgggct ggagctgtca gaagccggag cggcgggcgg tggagcggga tgaggccgcc
      541 atcgcccggt ggaagcacaa cgaatggccg cggataaaaa aacgccgctc aacgtggcgc
      601 ccatctcgtc ttcgtcgatg aaagcggctt tctgctcatc cccaatgtct gtcgaacctg
      661 ggctcccaaa gggcagactc cgtgtctgct ccaccgctac cgtcacgacc gtctctcggt
      721 ctgcagcggc ttggcggtgt cgcccaaacg acggcggctg gcgctgtacc tccgctgtcg
      781 gccccggaat ctctcgggcc tcgacatccg ggccttcctt cagcatctgc tccggcatct
      841 gcgcggcccc gtggatctgc tctgggatcg cggcccgatc catcggcggc gggaggtccg
      901 ggccttcctc gcggcccacc cgcgactgca cgtccactat ttccccgctt acgcgcctga
      961 gctcaacccg gccgagtacg tttgggcgcg gaccgatcgg gcactcgcta acggagcccc
     1021 cgacgacctc gccgatctcc ggcagcgact ggactctact gtccgccgcc ttcgccgctc
     1081 gcaactactc ctctggtcct gcatttacgc ctcggaccta ccgtggacgc gatgaggcct
     1141 ttccattatt tatgcgaagg tcaataattg gtcacggcct cgaagacgaa catcttcgat
     1201 gcgggccggc ccttctcttg ttccgcgggc gcgtacaccc ggtgggtccg cgcgtcgacc
     1261 gcgaggctgt gaatcttcgg ctccaccggg aagtcctgca gttttcggaa atgggccgga
     1321 tcgtccattt ggaacacgga gatggcaccg ctcgagcatg ctgcatagat gcgtccgagc
     1381 ccggcatcga acatcacgac gtccgcgccc ttcgccatgg gcaggtgggc gatcgcccgg
     1441 tgcgtgtcaa gatcgaacac tgccagcgtg tcgttgccct cgcaggcaag gaacgcacga
     1501 tggtgctcgg gatcgatc
//
LOCUS       DASYRV010000286         2120 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2187905, whole genome shotgun sequence.
ACCESSION   DASYRV010000286 DASYRV010000000
VERSION     DASYRV010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2120
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2187905"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..378)
                     /locus_tag="VGQ24_07505"
     CDS             complement(<1..378)
                     /locus_tag="VGQ24_07505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454720.1"
                     /translation="MTKDELKQRVYAAIDRRAAAIIELGERIRRKPELGFKEVATAKL
                     VEETFAQLGLRPKAGLALTGVRVEAEGRTGPGPTLALLGELDGLVVADHPEADRATGA
                     AHACGHNAQIAGLLGAAMGLLEAK"
     gene            complement(375..863)
                     /gene="sixA"
                     /locus_tag="VGQ24_07510"
     CDS             complement(375..863)
                     /gene="sixA"
                     /locus_tag="VGQ24_07510"
                     /inference="COORDINATES: protein motif:HMM:TIGR00249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0101006 - protein histidine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohistidine phosphatase SixA"
                     /protein_id="HEV8454721.1"
                     /translation="MSNESNLMRVYLVRHGEAVPEHVDPARPLSDRGRAEIERVAAQA
                     ARLGWRLAEIRQSGLLRAGQTAEILAARLAPARGVRAVEGLRPDDDPRRVAEECEAIR
                     EPVMLVGHLPHLGRLASLLLVGDAGRELIRFDTGTVAGLAKTGGRFLVDCVIGPHTEG
                     SP"
     gene            complement(1319..1873)
                     /locus_tag="VGQ24_07515"
     CDS             complement(1319..1873)
                     /locus_tag="VGQ24_07515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454722.1"
                     /translation="MASIIQRIGRVGRYDDVGRSWAHIWITGREPGLLFSLLDGKSTL
                     TKAESGELLLATFGEPTIRPEDYASYYLWDEDRTRALRRFWQVPPDVRKLRFHFRPPN
                     SQAVFNWHGTRFAYDWIPIANRYQLERVAEVTDLPFWQEMGYSEWRVVAPLEKREYRQ
                     RYEGKKDQDHRRWFWWSHGAGEET"
BASE COUNT          330 a          776 c          649 g          365 t
ORIGIN      
        1 cttcgcctcc aggagcccca tggcggcccc gagcagcccg gcgatctgcg cgttgtgccc
       61 gcaggcgtgg gcggcgccgg tggcccgatc ggcctccggg tggtcggcca ccaccagccc
      121 gtccagctcg ccgagcagcg ccagggtcgg ccccgggccg gtccggccct cggcctcgac
      181 gcggaccccg gtgagggcca gtccggcctt gggacggagc ccgagctgcg cgaaggtctc
      241 ctccacgagc ttcgcggtgg cgacctcctt gaagcccagc tcgggcttcc gccggatccg
      301 ctcgccgagc tcgatgatgg cggcggctcg ccgatcgatc gccgcgtaca cccgctgctt
      361 cagctcgtcc ttggtcatgg cgatccctcc gtgtgaggtc cgatgacgca gtcgaccaga
      421 aagcgaccgc cggtcttggc caggccggcg acggtaccgg tgtcgaaccg gatcagctcg
      481 cggccggcat cgcccacgag gaggagggac gcgagccggc cgaggtgcgg caggtgcccc
      541 accagcatga ccggctcccg gatcgcttcg cactcctcgg cgacccggcg ggggtcgtcg
      601 tcggggcgga ggccctccac ggcccggacc ccccgcgcgg gcgccaggcg tgcggccagg
      661 atctcggccg tctgcccggc ccgcagcaac cccgattgcc ggatctcggc cagccgccac
      721 ccgagccggg cggcctgggc ggcgacccgc tcgatctcgg cccgcccgcg gtcggagagc
      781 ggccgcgccg ggtccacgtg ctccggcacc gcctccccgt ggcgcaccag gtacacccgc
      841 atcagattcg attcattaga cacccgcgat tccagaggct cagacaggct acaacacgca
      901 ggcgaacccg tcgaccgacc cacgggtagg gcgggaccct tgtctgatcg ctcgcggtgg
      961 tttcagtccc ctcctcttcg gggaacttgg tgcgactgaa ccagatgcgt ttggagcctc
     1021 gacggtacat gctttcagtc ccctcctctt cggggaactt ggggggcccg tgcggctcga
     1081 cgacgccatt cgagcaccta gcaactctcc cgttcgtcgt ggccccaccc gccacgccct
     1141 ctcgcgaagc gcgccgcccg cttggcccac gaactcggtc ccatcctcta ggacgccccc
     1201 tttctcgcgc ctgcggtcga actcaactgt ccctccatca ccgccgacgg gggcctcttc
     1261 gatggcgccc gcatcctgtc cgcgtccgcc gctctctcga ttcggctcac cgtcctgact
     1321 acgtttcctc gccggcaccg tggctccacc aaaaccaccg ccgatgatct tggtccttct
     1381 tgccttcgta gcgctggcgg tactcgcgct tctccagcgg tgccacgact cgccactccg
     1441 aataacccat ttcctgccag aagggtaggt ccgtcacctc ggcaacccgc tccagctggt
     1501 acctgttagc gatcggaatc cagtcgtagg caaaccgggt tccgtgccag ttgaagactg
     1561 cctgcgagtt tggcggccgg aagtgaaacc gcagtttccg aacgtccggc ggaacttgcc
     1621 agaagcggcg cagcgcgcgt gtcctgtctt cgtcccaaag atagtagctg gcgtagtcct
     1681 ccggccggat ggtcggctcg ccgaatgttg ccaacagcag ttcaccagac tcagccttcg
     1741 taagcgtcga cttgccatcc agcagcgaga agaggagacc tggctctcgc ccggtaatcc
     1801 agatgtgcgc ccaggacctc ccgacatcgt cgtagcgccc aacccggccg atgcgctgga
     1861 tgattgacgc cacctcccag ctagccaatt tgcagaagtc ttcccgtaat cgtgcagcag
     1921 cgccgcccag cgcatcagct ccttatctga ttcagtgtgg acctgtgtga agggcagcac
     1981 gttgtgcacg agtgagtatg cgctgaagct gtgaatgaac agactctcgt tccaagactt
     2041 cgcatggtac aagtggaatt cgcactcgcg aaggaagtcg agagcacgct ctagcgtcag
     2101 tcccattggc accccgtcat
//
LOCUS       DASYRV010000287         3556 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3796965, whole genome shotgun sequence.
ACCESSION   DASYRV010000287 DASYRV010000000
VERSION     DASYRV010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3556
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3796965"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1620
                     /locus_tag="VGQ24_07520"
     CDS             <1..1620
                     /locus_tag="VGQ24_07520"
                     /inference="COORDINATES: protein motif:HMM:NF015052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein
                     domain-containing protein"
                     /protein_id="HEV8454723.1"
                     /translation="HGSDWLTEAALDTYLPLLEVLRALAADKVPSPITIGFTPVLANQ
                     LASPLFVAEMEAFFEQRLKACDEAPASLASTGDDHLLPLVGFWRARLARLRDLFLSTN
                     QDLIGAFKALEAAGTIEIIGSAATHGYLPLLARDESIRLQLAVGISEHRRIFGRAPAG
                     CWLPECAYRPRGPWEPWPTAPRTGVRRGIEEHLADAGFQYFFVDAHLAAAGRPLGLSG
                     DPAGDPTIHTPARAETPAEPLRSPYRAYRVAHGSVVAYVRDPRASMQVWSRSEGYPGD
                     EWYLEFHKMRWPGGLKLWRVTGPGVDLGHKQPYNPDAASDRARGHADHFANLLQGISE
                     TGAQNREGVVVAPFDTELFGHWWFEGPDFLGNVYRALAGKREVIHPATGSRHLQEHPA
                     RAAIRLPWGSWGANGDSSMWLSDRTAWTWERLWPLEQSFWDVAPAALASAPARPVLAQ
                     ATRELLLAQSSDWQFIISTGAAADYAERRFREHCDDAEQLIAALGPGREADLESAQRR
                     AEELGKRDQLFPNVLPAVAAALGGSRSLVVG"
     gene            1623..>3556
                     /locus_tag="VGQ24_07525"
     CDS             1623..>3556
                     /locus_tag="VGQ24_07525"
                     /inference="COORDINATES: protein motif:HMM:NF015052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase/4-alpha-glucanotransferase
                     domain-containing protein"
                     /protein_id="HEV8454724.1"
                     /translation="MLPIRFALGVHLHQPVGNFDHVFEQHVQDVYRPLLEHLSARDFL
                     PAVLHLSGPLLEWLEGHDTRYLDQLGKLVSDRKVELLLAGFYEPVLASLPRADRVEQI
                     QWMHDAIRRRFGVDARGLWLTERVWEPELAADLADAGVRYALVDDRHFLVSGFASEQL
                     HAPFWTESDGKRVALFPIDERLRYLIPFRPPEETAAYLRELRGAGHRLAVLADDGEKF
                     GGWPGTKEWVYERGWLERFMGTIGGLIQAGEVQLSTLSDALDAVPSGGIAYLPTASYR
                     EMEGWSLPPDAALRLIRLERDLGEARMAGPDSALIRGAHWRNFLVKYPESNRMHKKMQ
                     ALSLLCRLRGDPPVARRAVGRAQCNDAYWHGVFGGLYLPHLREAIWRNLAQAERELRR
                     GQELSVEVLDIDGDGHDEIWIHSDQFSALVSPRRGGAIEEYTIFDTETNYANSLTRRR
                     EAYHDTALENQAEATRDAESGTPSIHDIEEGIRLEQRPPLDADDRALLVDRVLPRGLP
                     LSAYAAGDYWPAYSWARSPCGFKIEREPDLIEIVCSFRNSTGGTSLEKRLGFAPDGSI
                     RVSYRWDASVGQPDDLFATELSLFAPLDLRPDPGADAWTFPIETVAKSERGLDHTRQG
                     ESVTLRWPVHLGAATIEIQA"
BASE COUNT          544 a         1190 c         1201 g          621 t
ORIGIN      
        1 cacgggagtg actggctcac cgaggccgcg ctggacacct acctgccgct gctcgaggtg
       61 ctccgggcac tcgccgccga caaggttccg tcgccgatca ctatcggctt cacgccggtg
      121 ctcgccaacc agcttgccag ccccctgttc gtcgccgaga tggaagcgtt cttcgagcag
      181 cggctcaagg cgtgcgatga ggcgccggct tccctcgcga gcacgggaga tgaccacctc
      241 cttccgttgg tcggcttctg gcgcgctcgc ctggctcgcc tccgcgatct gttcctcagc
      301 accaaccagg atctgatcgg cgcgtttaag gcattggagg cggccggcac gatcgagatc
      361 atcggctcgg cggcgacgca cggctatctc ccgctcctcg cacgcgatga gagcatccga
      421 ctgcaactcg ccgtcggtat ttcggagcac cgccgcatct tcggccgggc gccggccggc
      481 tgctggttgc cggagtgcgc ctaccgcccg cggggtccct gggagccgtg gcccacggca
      541 ccgcgcactg gtgtgcgccg cggaatcgag gagcacctgg cggatgccgg cttccagtat
      601 ttcttcgtgg atgcccatct cgccgcggcc ggacgcccgc tggggctctc cggcgatccg
      661 gccggcgatc ctacgatcca cactccagcg cgtgcggaaa cgccggccga gccgcttcgc
      721 tcgccctatc gcgcgtatcg cgtggcacat ggttcggtcg tggcttacgt gcgcgatcct
      781 cgggcctcga tgcaggtctg gagccgctcc gagggatatc ccggcgacga gtggtatctc
      841 gaattccaca agatgcgctg gcccgggggg ctcaagctct ggcgggtgac cggccccggc
      901 gttgacctgg gacacaagca gccctacaac cccgatgcgg cgagcgaccg tgcccgcggg
      961 cacgccgacc attttgccaa tcttctgcaa gggatttcgg agactggggc gcagaaccgc
     1021 gagggcgtcg tggtcgcccc attcgacacc gagctcttcg ggcactggtg gttcgaggga
     1081 ccggactttc tgggcaacgt ctaccgcgcg ctcgccggga agcgggaggt gattcacccg
     1141 gcgaccggtt cccggcacct tcaggagcat cctgcccgcg ccgcgattcg cctcccgtgg
     1201 ggctcgtggg gcgccaatgg ggacagcagt atgtggctca gcgatcggac tgcgtggacc
     1261 tgggaacggc tctggcctct ggagcagtcg ttctgggatg ttgcgccggc cgcgctggct
     1321 tcagccccgg ctcgtccggt cctcgcccag gcaacaagag agctgctgct cgcccagtcc
     1381 tccgattggc agttcatcat ctcgaccggc gcggcggccg attatgccga gcgtcgtttc
     1441 cgggagcact gcgacgacgc cgagcagttg atcgcggcac tcggtccagg ccgtgaggcc
     1501 gacctcgaat cggcgcaacg ccgggccgag gagctgggca aacgcgatca gctcttcccc
     1561 aacgtgttgc ccgccgtggc agccgcgctc gggggctccc gctcactcgt cgtgggatag
     1621 tcatgcttcc cattcgattt gccttgggtg tccatctgca ccagccggtc ggcaatttcg
     1681 atcacgtatt cgagcagcac gtgcaggacg tctaccggcc gttgctggag cacctctccg
     1741 cccgggactt cctgccggcg gtgttgcacc tctcggggcc gctgctcgaa tggctcgagg
     1801 gccacgacac ccggtatctg gaccagctcg gcaagctggt gagcgatcga aaggtcgagt
     1861 tgctcctggc cggcttctac gagccggtac tcgcctctct gccccgcgcc gatcgggtcg
     1921 aacagatcca atggatgcac gacgctatcc gccgccgatt tggggtggat gcccgcggcc
     1981 tctggctcac cgaacgggtg tgggaaccgg agctggccgc cgacctggcg gatgccgggg
     2041 ttcgctacgc actcgtggat gaccggcact ttctcgtctc cggctttgcc agcgagcagc
     2101 tgcacgcccc cttctggacc gagagcgacg gcaaacgggt ggcgctcttc ccgatcgacg
     2161 agcggctgcg ctacctcatc ccgttccggc caccggagga gacggccgcc tacctgcgcg
     2221 agctccgcgg agccgggcat cggctggcgg tgctggccga tgacggtgag aagttcggcg
     2281 gctggcctgg taccaaggag tgggtgtacg agcgcggatg gctggagcgc ttcatgggga
     2341 caatcggcgg gctgatccaa gccggggagg tccagctcag caccttgagc gatgcgctgg
     2401 acgcggtccc gagcggaggg atcgcatatc tgccgacggc gtcgtatcgc gagatggagg
     2461 gctggtcgct tccgcctgat gcggcgcttc ggctgatccg gctcgagcgt gatctcggcg
     2521 aggcccggat ggccgggccc gatagcgcac tgatccgggg agctcactgg cggaatttcc
     2581 tggtgaagta ccctgaatcc aaccggatgc acaagaagat gcaggcgctc tccctcctct
     2641 gccgcctgcg aggagatcct ccggtagctc gccgggccgt cgggcgggcg cagtgcaacg
     2701 acgcctactg gcacggcgtg ttcggaggac tctacctccc ccacctgcga gaggcgatct
     2761 ggcggaacct ggcccaggcg gagcgggagc tccggcgggg ccaggagctg tcagtggagg
     2821 tgctggacat cgacggcgat ggtcacgacg agatctggat tcactcggac cagttctcgg
     2881 ccctggtgag tccacgccgg ggaggggcga tcgaggagta caccatcttc gatactgaga
     2941 ccaattacgc caacagcctg acccgtcgtc gtgaggccta ccacgacacg gccctggaga
     3001 atcaagccga ggcgacgcgt gacgcggaga gtggaacgcc gagcattcac gatatcgaag
     3061 agggcattcg tttggagcaa cgaccgccgc tcgacgcgga cgaccgcgcg ctgctggtgg
     3121 accgggtgct gcctcgcggg ctcccactct cggcatatgc ggccggcgat tactggccgg
     3181 cctattcctg ggcccggagc ccgtgcggct tcaaaatcga gcgcgaacct gacctcatcg
     3241 agatcgtgtg ctcgttccga aactccaccg gaggcaccag tctggagaag cggctcggct
     3301 ttgctccgga cggtagcatc cgggtgagct atcgctggga tgcgtcggtc ggtcagcctg
     3361 acgacctctt cgcgaccgag ctttcgctct tcgccccgct cgatctgcgc ccggaccccg
     3421 gtgccgacgc ctggaccttc ccgatcgaga ccgtggctaa gtccgagcgc gggctcgacc
     3481 acacccggca gggcgaatcg gtaacgttgc gttggccggt acatcttggt gcggccacga
     3541 tcgagatcca ggcaca
//
LOCUS       DASYRV010000288         6011 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1777870, whole genome shotgun sequence.
ACCESSION   DASYRV010000288 DASYRV010000000
VERSION     DASYRV010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6011
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1777870"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..677
                     /locus_tag="VGQ24_07530"
     CDS             <1..677
                     /locus_tag="VGQ24_07530"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEV8454725.1"
                     /translation="VVTMLGGKKVVVHAGKTAWVYVLDAATGKLIRKTENFTPQENMF
                     ALPSDKGTRMLPGANGGSEWSPIAIDPALDYAFVAGLHQPMNYITHTAPYEKGKLWLG
                     SAFVAIPGEEQYGLYSAVNLKTGKIAWQNKVPQPMMGGGLATAGGLTFTGEGNGNFNA
                     YNSKTGKLLWQFNAGAGCNSAPMTFMHGGEQMIAVACGGNFQISYPLGDAVFVFGLPK
                     RTAMKK"
     gene            743..1150
                     /locus_tag="VGQ24_07535"
     CDS             743..1150
                     /locus_tag="VGQ24_07535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454726.1"
                     /translation="MAVNRWWWVTLLVVAGIVLASRAWPGQEAERHWLGVNGHDWQRM
                     GPDARLAYIEGFLAGAAVSQAAAGARDSAGVRTGLEQLDRSGRFRFPFAANVYASRMS
                     DYYWWKNHLPLPTWYAFLEVNTTLGRPISDSVP"
     gene            1239..2450
                     /locus_tag="VGQ24_07540"
     CDS             1239..2450
                     /locus_tag="VGQ24_07540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454727.1"
                     /translation="MRRVALLCLGLVVGAASAAEAQLTMQMSNGWSFTFAGNVNAFLL
                     YDDVNDAGVDPLGGKGAAGIRTGLLPAFAVFDAKGKEGSTDLGVHFGFAPQIQCGYNA
                     PAAGGAATGGASVGGQGHDCFGAQIDMRQVYLTVGGSWGQILAGRELGLFGRQNILND
                     QTLFGVGATGGAAGQGTTLGRIGFGYIYPNFKAQMTYSSAPGRPFNFSIGLFQPAQNP
                     PFLTVQIPRVEAEGVWTSGNNKVWVGGTAQTNKTDETTGVSETGFSWGGTGGVRVGSP
                     MFSVTGTAYYGKGIGNILMFLGGATGTGAGGSDDLRKSYGGYGQITVTPANSKVTVAG
                     SFGGSLQENANSEPDFKTKNWLASGGIYFQATKSLKVVGEFNYAITADDVAATEDIKE
                     IAPAFGLMLFF"
     gene            2570..3019
                     /locus_tag="VGQ24_07545"
     CDS             2570..3019
                     /locus_tag="VGQ24_07545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454728.1"
                     /translation="MGSYRSLLIIVLTAGCAGGQMTSSYMAASPSPTPDVFACVRGQL
                     KANRFDQTSIDVNENRLTARKYDETVRRPDVTFRRLVDRLEIEVAPGAGGDSVTTVSV
                     KARTFGETVNQRGPTETQERTSETARAAAQSIINKCSRPVDSLSVPG"
     gene            3088..3970
                     /gene="lipA"
                     /locus_tag="VGQ24_07550"
                     /pseudo
     CDS             3088..3970
                     /gene="lipA"
                     /locus_tag="VGQ24_07550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904980.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
     gene            4231..5250
                     /gene="pdhA"
                     /locus_tag="VGQ24_07555"
     CDS             4231..5250
                     /gene="pdhA"
                     /locus_tag="VGQ24_07555"
                     /inference="COORDINATES: protein motif:HMM:TIGR03182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HEV8454729.1"
                     /translation="MAEPTATRPKPKPKGLDPARAEEYRRWLRQMMLNRRFEEKAGEA
                     YSLGKIGGFCHLYIGQEAVAVGSLGALGPDDYITCSYREHGHALARGISTRAVMAELF
                     GKAPGCSGGKGGSMHLFDASLGFLGGHAIVGAHIPLATGMAFAAKYRNTDQVSVCYFG
                     EAAVNNGAFHEALNMAALWKLPAIYLCENNRYGMGTALERASALYDISERACSYDMAN
                     EVVDGQDVLIMNAAMERAVQRARNEKLPTLLEVRTYRFMGHSMSDPIHGHYRTREEVE
                     DQRKRDPIAVWSQRLIVDGMMDEASVRAMDKSVVEEVEEAYQFAEQAPDPEPEALFTH
                     VYANP"
     gene            5374..>6011
                     /locus_tag="VGQ24_07560"
     CDS             5374..>6011
                     /locus_tag="VGQ24_07560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex E1 component
                     subunit beta"
                     /protein_id="HEV8454730.1"
                     /translation="MAVVTYRDALNQALREEMQRDPSVFLMGEEVGVYQGAYKVSRGL
                     LDEFGPMRVVDTPITELGFAGVGVGAAMVGLRPVIEFMTWNFALLAVDQLINSAAKMR
                     YMSNGQVGVPAVFRGPGGAALQLAAQHSQAFESWYAHIPGLKVVMPATPADAKGLLKS
                     AIRDDDPVIFIEGEMLYNTKGEVPEGEHVVPIGQADLKREGNDVTIVCHSKTV"
BASE COUNT         1079 a         1943 c         1944 g         1045 t
ORIGIN      
        1 cggtcgtcac catgctgggt ggcaagaagg tcgtggtaca tgccggcaag accgcatggg
       61 tctacgttct cgacgccgcc accggcaagc tgatccgcaa gaccgagaac tttactccgc
      121 aggagaacat gttcgcgctg ccgagcgaca agggtacccg gatgctcccg ggcgccaacg
      181 gcggctcgga atggtcaccc atcgcgatcg acccggcgct cgactatgcc ttcgtagccg
      241 gcctgcacca gccgatgaac tacatcaccc atactgcacc gtacgagaag ggcaaactct
      301 ggctcgggtc ggcgttcgtc gccatcccgg gtgaagagca atacggtctc tactccgcgg
      361 tgaacctcaa gacggggaag atcgcctggc agaacaaggt gccccagccc atgatgggcg
      421 gcggcctggc caccgccggc ggactcacct tcaccggtga gggcaacggc aacttcaacg
      481 cctacaattc aaagaccggc aagctgctct ggcagttcaa cgccggcgcc ggctgcaact
      541 ccgcccccat gacatttatg catggtggcg aacaaatgat cgccgtggcg tgcggcggca
      601 acttccagat cagctaccct ctcggcgatg cggtcttcgt cttcggcctg ccgaagcgga
      661 ccgcaatgaa gaagtaagcc accggcaacg gccggcgggg agctccatgt tcgggttcct
      721 tgccggccgg tttgtttgag atatggcggt caatcgttgg tggtgggtga ccctcctggt
      781 tgtggccgga attgtcctgg cgtcacgcgc gtggcccggc caggaggccg aacgacactg
      841 gctcggtgtc aacggccacg actggcagcg gatggggccg gatgcccgtc tcgcctatat
      901 cgagggtttt cttgccggtg cggcagtgag tcaagccgcc gccggagctc gggattcagc
      961 gggagtcagg accgggctcg agcagctgga ccggagcggc aggttccgtt tccctttcgc
     1021 cgcgaatgtg tacgcaagtc gcatgagtga ttactactgg tggaagaacc accttcccct
     1081 gcccacctgg tacgctttcc tggaggtgaa cacgacgctc ggtcgtccta tatcggattc
     1141 agtgccttaa cgtcgcagga tcttgctggt gcacggtatt ttcgtcccga agtttggctg
     1201 tcgttggcgg tcatccttac tctgagggag acgcacctat gaggcgagtc gcactgttgt
     1261 gtttgggtct ggtggtggga gcggcgagcg ccgccgaggc acagctgacc atgcaaatga
     1321 gcaacggctg gagcttcacc tttgccggga acgtgaatgc gttcctcttg tacgacgacg
     1381 tcaacgacgc gggtgtcgac ccgctcggcg gtaaaggcgc ggcagggatc cgtaccggct
     1441 tgctcccggc cttcgccgtc ttcgacgcga agggcaagga aggctcgacg gatttgggcg
     1501 tgcacttcgg cttcgcgccc caaatccaat gcggatacaa tgctcctgcc gccggcggcg
     1561 cagccacggg cggggccagc gtggggggtc aaggccacga ctgcttcggg gcgcagatcg
     1621 acatgcgtca ggtctacctg acggtgggtg gcagctgggg ccagatcctc gccggccgcg
     1681 agctcgggct gttcggccgc cagaacattc tcaatgacca aaccctcttc ggcgtcggcg
     1741 ctaccggcgg cgcggccggc cagggcacca cgctgggccg gatcggcttc ggatacatct
     1801 acccgaactt caaggcgcag atgacctaca gcagcgcgcc gggccgtccg ttcaacttct
     1861 ccatcggcct gttccagccg gcgcagaacc cgccgttcct gacggttcag attccgcggg
     1921 tcgaggctga gggtgtctgg acgtcgggca acaacaaggt ctgggtcggc gggacggcgc
     1981 agaccaacaa gaccgatgaa acgaccggcg tatccgagac cggcttctcc tggggcggaa
     2041 ccggtggtgt gcgggtcggc agcccgatgt tctcggtcac cggcaccgcc tactacggca
     2101 agggcatcgg caacattctc atgttcctcg gtggggctac cggcaccggc gcgggcggca
     2161 gcgatgacct ccgcaagtcc tacggtggct atggccagat cactgtcact cctgctaaca
     2221 gcaaggtgac tgtcgccggc agcttcggcg gaagccttca agaaaacgcc aacagcgaac
     2281 ccgacttcaa gaccaagaac tggctcgcgt ccggcggcat ctacttccag gccaccaagt
     2341 cgctcaaggt tgtgggcgag tttaactatg ccataaccgc cgacgatgtc gctgccaccg
     2401 aggacatcaa ggaaattgcg ccggcgttcg gcctgatgtt gttcttctaa gcgattccgc
     2461 agtccggtct cacaccggcg gtccccatgg gccgccggtt tttttgcctc ccaggcccgt
     2521 gtagattccc accgcacctt cttccaactc ccacacgcga ggcaacggga tgggttccta
     2581 ccgctccctg ctcatcattg tgctgaccgc gggctgcgcc ggtggtcaga tgacttcgag
     2641 ctacatggct gcgagcccct ctccgacgcc cgacgtcttt gcctgcgtcc gcggacagct
     2701 caaggcgaac cgcttcgacc agacctcgat cgacgtgaac gaaaaccggt tgaccgcgcg
     2761 gaaatacgac gagacggtgc gccggcccga tgtgacgttc cgccgcctgg tggaccgtct
     2821 ggagatcgag gtcgcccctg gtgccggtgg cgacagcgta accactgtgt cggtcaaggc
     2881 gcgcaccttt ggcgaaacag tgaaccagcg cgggccgacc gagacccagg agcgcacctc
     2941 ggaaaccgcg cgcgcggcgg cgcaatccat catcaataag tgcagccgtc cggtagattc
     3001 tctctctgtc ccgggctagt tttcgcccaa gtttcgactt cggagtgtga gcgtggccgt
     3061 accgctggtc caactgaccc gcctcgcatc atcccagtcc ggcgggcccg ttccagccgg
     3121 agcggcgcca gcccggaagc catcctggct gaaagtaaga gctcccggcg ggcccaacta
     3181 cgtgcaggtg aaggccatga tgcgcgagct cggcctccac accgtatgcg aggaggcccg
     3241 ctgtcccaac gtgggtgagt gctgggagca taaggccgcc accttcatga tcctgggcga
     3301 cgtgtgcacc cggaactgca cgtactgtgc ggtgtcccac ggcaccccga ctgtcttcga
     3361 cccgctggag ccggtccgcc tggcggaggc ggtatcccgg atgcagctcc agcacgtcgt
     3421 gatcacgtcg gtcgaccggg acgacctgcc caacgggggt gccgaggcct ttgccgactg
     3481 catcacggag atccgtcgcc gccttcctga caccacggtc gaggtgctca tccccgactt
     3541 caagggctcc gaagcggctc tccggatcgt catggacgcg cgccccgaca tcctcaatca
     3601 caacctcgag accgccgagc gcctctatcg tttggcccga cctggcgggc gatacgaccg
     3661 ggcactccgc ttgctggcaa atgcgcgccg catggctccc gatgcgctca cgaaatcggg
     3721 cctcatcctc ggcatgggcg aggagtggga cgaggtgctg gtctgcatgc gggatctccg
     3781 ccggagtgag gtcaatattc tgaccttggg gcagtatctg cgtccatcgg gcagtcacat
     3841 gccggtcgcg cgctactaca ccccggcgga gttcgctgag ctccgtgagg tcggcctcgc
     3901 gctcggcttc tcgcacgtac agtccagccc actcacccgg tcttcctatc acgcgtggga
     3961 acaggcgcgc tccgcgcgtc ctgagcgcag cgaaggatct ccggcgaaaa gcggtggtca
     4021 tcccgagcgt agcgagggac ccgattcagg ctcgcgcccc gagccgccgg tccgagccct
     4081 tcgcgagagc tcagggcagg ctccgcgagg gggcggcgag ggggccgaag cccatgtcgg
     4141 ggtgtccccc tgagtaccgc cagaggccaa cgaggagccc gctcggagcg tagcgaggta
     4201 agccccgagc ctcggaccca agagcgcgca atggccgagc ccaccgctac ccgacccaag
     4261 ccaaagccaa aaggactcga ccccgcccgg gcagaggagt atcgccgctg gctccggcag
     4321 atgatgctca accgccgctt cgaggagaag gcgggagagg catacagcct gggcaagatc
     4381 ggcggcttct gccacctcta catcggccag gaggcggtcg ccgtcggaag cctcggcgcg
     4441 cttggtcccg atgactacat cacctgctct taccgtgagc atgggcatgc gcttgcccgg
     4501 ggaatctcca cccgggcggt gatggcggag ctcttcggca aggcgccggg ctgttccggg
     4561 ggcaagggcg gctcgatgca cttgttcgac gcgtcgcttg ggttcctcgg tggtcacgct
     4621 atcgtgggag cccacattcc gctggctacc ggaatggcgt tcgcagccaa gtaccggaac
     4681 accgaccagg tgtcggtctg ctatttcggc gaggccgcgg tcaacaacgg cgcgttccac
     4741 gaggccctca acatggccgc gctgtggaag ctgccggcga tctacctctg cgagaacaac
     4801 cgctacggca tgggtactgc gctcgagcga gccagcgcgc tctacgacat ctcggagcgg
     4861 gcctgttcct atgacatggc caacgaggtg gtggacggcc aggatgtgct catcatgaac
     4921 gcggcaatgg aacgcgcggt ccagcgggcg aggaacgaga agctccccac cctgctcgag
     4981 gtgcgcacct atcgcttcat gggccactcc atgtccgatc cgatccacgg ccactaccgg
     5041 acccgcgaag aggtggagga tcagcgaaag cgggacccga tcgccgtctg gtcgcagcgg
     5101 ctcatcgtcg acggcatgat ggacgaagcg tccgtgcggg cgatggacaa gagtgtggtg
     5161 gaagaggtgg aggaagcgta ccagttcgcc gagcaggcgc cggatcccga gccggaggca
     5221 ttgttcactc atgtgtatgc gaatccgtag agctgtcatc ctgagcgaag cgaaggatct
     5281 ctccggtcgc gagcatagag atccttcgct cgccgcgctc gctcaggatg accaccgccc
     5341 ggcgctgcgg ttcctatcgg agagacggtt ctaatggcgg tggtcacgta ccgcgacgcc
     5401 ctcaaccagg cactccgtga ggagatgcag cgggatcctt ccgtcttcct catgggtgag
     5461 gaagtcgggg tctatcaggg cgcctacaag gtcagccgcg gactgctcga cgagttcggt
     5521 cccatgcggg tggtggacac gccgatcacc gagctcggct tcgccggcgt tggtgtcggc
     5581 gccgccatgg tgggactccg accggttatc gagttcatga cctggaactt tgccctgctc
     5641 gcagtggacc agctgatcaa ctccgccgcc aagatgcgct acatgtccaa cggacaggtc
     5701 ggcgtgccgg cggtgtttcg cgggcccggc ggcgccgcac ttcagctggc ggcacagcac
     5761 tcccaggcct ttgaaagctg gtatgctcac atcccggggc tcaaggtcgt aatgccggct
     5821 accccagccg acgccaaggg gctgctcaag agcgcgatcc gggacgacga cccggtgatc
     5881 ttcatcgaag gcgagatgct ctacaacacc aagggcgaag tcccggaggg cgagcacgtc
     5941 gtccccatcg gccaagccga tctcaagcgt gagggcaacg atgtgacgat cgtctgccac
     6001 tcgaagacgg t
//
LOCUS       DASYRV010000289         7663 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2190667, whole genome shotgun sequence.
ACCESSION   DASYRV010000289 DASYRV010000000
VERSION     DASYRV010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7663
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2190667"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1442)
                     /locus_tag="VGQ24_07565"
     CDS             complement(<1..1442)
                     /locus_tag="VGQ24_07565"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEV8454731.1"
                     /translation="MRRLRIGILDLVTKSPNPSLYGRVMNANLASIMPQVVGVWCEQE
                     GHHVQFVCYTGMEDLLEELPPDLDLVFIGAFSQSAQLAYALSNFFRKRGAVTVLGGPH
                     ARCYPEDACKYYDYVLGFTDRNTISEVCRDCAPQRPLGRHLTAARQPLELPTLEERWK
                     FVEPTLAKAPTIKIVPMIGSLGCPYTCSFCIDSTVDYQPLSFQQLRDDLKFLLTKIKN
                     PIVGWHDPNFGVRFDDYMEAVESAVPDARIRHIAESSLSLLSEKHLQRLRKNGFQAIL
                     PGIESWYDMGNKSKTRRTGMDKVMQVSEHVNMILRYIPYIQTNFVMGLDGDMGPEPFE
                     LTKKFIDLSPGAFPAYSLLSAFGRAAPMNLDYQRAGRVLPFPFHFLNNNHAMNVRPKN
                     YTWPEFYKHLVDVTRYSFSWKAIARRIPATPTMIPKWMNVVRAVSSEGFGRIRYHETI
                     LGLLDTDRSVRRYMEGETTQLPEFYASRIRR"
     gene            complement(1612..2556)
                     /locus_tag="VGQ24_07570"
     CDS             complement(1612..2556)
                     /locus_tag="VGQ24_07570"
                     /inference="COORDINATES: protein motif:HMM:NF039905.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEV8454732.1"
                     /translation="MGGWIAVVLNGSSGKGDCAAAAKRLEEIFAAADREARITVAESG
                     DQIRSAMEEAVNGGCETLVAGGGDGTINTAAQVVIGREVPLGILPLGTLNHFAKDLGI
                     PLDLDEAAKVVLDGIVCKVDAGEVNGRIFLNNSSLGVYPAVVRLRERYQATGLSKWIA
                     ALWASLTVLRRNSFLGVRIIAEEQAIVRRTPFVLVGNNEYRMIGLQPASRDSLASGHL
                     ALYVVNAERRVGLLRLALQVLLHGVEQVRELDLLTVDEATIETRRHRLQVATDGEVFT
                     LESPLSYRIRPGALRVHVPGPASACYPHPTWASSSRAI"
     gene            complement(2557..3246)
                     /locus_tag="VGQ24_07575"
     CDS             complement(2557..3246)
                     /locus_tag="VGQ24_07575"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEV8454733.1"
                     /translation="MTSSPPPGPAESERLLSAALVMGLLAAAAALMLFSWLGREILTG
                     VTPVLDDRIRLAVHGLASPPVTAIMLALSRYGGPGGLTPIGLALALAFLIKRWHRGAL
                     LVVVTMAGAGLLDLLLKQSFGRGRPAAFFDYPLPASHSFPSGHAFFAASFFGGLAVLV
                     SDRVRSRFFRAAVWIVAVSLILLVGLSRVYLGVHYPSDVIAGYAAATVWVAAVAFGDR
                     LVSHRRRRRTV"
     gene            complement(3380..3910)
                     /locus_tag="VGQ24_07580"
     CDS             complement(3380..3910)
                     /locus_tag="VGQ24_07580"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEV8454734.1"
                     /translation="MARRLPRQAVDPRIELLLEIMDQAFDRRGWHGTTLRGALRGVTP
                     AQALWRPGPDRHNVWELTIHAAYWKYAVRRRLAGEAAGSFERKPSNWPDIPDPPDLKA
                     WKRDIGLLEAEHGKLRQVVAGLSAADLERRSPKGVWTYAEEIHGVAAHDLYHTGQIQL
                     IKRLMPAGTATEGRRQ"
     gene            complement(3933..5504)
                     /locus_tag="VGQ24_07585"
     CDS             complement(3933..5504)
                     /locus_tag="VGQ24_07585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454735.1"
                     /translation="MLLPVTLHAQATVDSGPVTDPDAIIRGVQLQRRDIFDPNERSWL
                     ARLANRLHFRTRPAIIRRELLFRVGEPYDSALVAESERNLRSLGIFRRVQIDSVRTQT
                     GLMLRVLTKDGWSTQADWRFRSTGGEVAFTIGLVETNLLGTASTAAVRYRKDPDRSSV
                     ALLFRRPRMFLGTVGLGLQYENRSDGRVGAIVIDRPFFALNSPRAFRFEAEDHRERVL
                     RFFEGQELPSDTLSRRFSLVRASSAWAVHASSAGYLRAGVMGQVQRDDFKPEASTAPF
                     SKTVTGSLGPYLVRNRARFIVTRGYAGFAREEDVDIGLTIRAGLQLAPRAFGYDRDGI
                     GPSVNGRVGATLPGGFAHVDAAANGLYSTAGLDSGSVLLAGTVVLQPGSRHVAVMHIE
                     GGWLRNPVPGEEFDLGLGSGPRAFGSHAFTGDRSIFATAEYRYTVVDDLGGVVGLGIA
                     GFVDHGGAWYAGSRRRVGWDAGVGLRVGASRSSDTPALRFDLARRFANDAEPSGWVLT
                     VGKGFVFSTSPRGSN"
     gene            complement(5586..6380)
                     /locus_tag="VGQ24_07590"
     CDS             complement(5586..6380)
                     /locus_tag="VGQ24_07590"
                     /inference="COORDINATES: protein motif:HMM:TIGR01458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01458 family HAD-type hydrolase"
                     /protein_id="HEV8454736.1"
                     /translation="MGAVLSRPRGYLLDLDGTLYSGGAAIPGAVAALDRLRRRHIPVR
                     LVTNTTSRSRAMLVERLRGYGFEVSIEDVFTATLAGNVLARTAGYRCIAPFMPEPALQ
                     DMAELELSGGTSNRSQGCVPQAVIVGDLGERWSYALLQEAFEYVMAGAELIALSRDRY
                     WWNQDRLALDAGPFVAALEFATGKSAAVAGKPSPSFYAAALQSLEVESADSVVMIGDD
                     LWSDVEGAQRAGLQGWLVRTGKYRETALRESAILPDRILESVAELD"
     gene            6395..7114
                     /locus_tag="VGQ24_07595"
     CDS             6395..7114
                     /locus_tag="VGQ24_07595"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HEV8454737.1"
                     /translation="MMPVAPLIVHTALLARLAAPYPFSVGETLRYDAKLGYFPVGEAT
                     VSVTGMAKERGRESFVFTMAGQGGPPGWRVRYDMTSWVGTRRFHSLRFHRRLEQGGKI
                     EEHGYVIVPDSARYREEGVPGDWTAPADPLDELAFLYYLRAAPLEVGRTYSLARYFKT
                     GYNPIEVSVAGRESIAMPGGTTTPCLALRVSTRGTTMRVWLTDDTRRLPAQLEIPLPF
                     GSVTLTLVSSISPGNSRSPSG"
     gene            complement(7074..>7663)
                     /locus_tag="VGQ24_07600"
     CDS             complement(7074..>7663)
                     /locus_tag="VGQ24_07600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEV8454738.1"
                     /translation="LFRGKDNAFYDPKAEYQLSQTALSYIEGLLQHARGFCAITNPLI
                     NSYKRLVPGYEAPVNVAWSMRNRSPLVRIPDRRGLGTRCELRMPDPSCNPYLALTVQL
                     AAGLDGIENKFTAREPVSRNIFTMSYRDRRKYRIDELPRDLHEALELFEKDDVIKAAL
                     GEHLTERFLEAKRNEVLQYNLQVSRWEIENYLGRY"
BASE COUNT         1397 a         2519 c         2464 g         1283 t
ORIGIN      
        1 cgccggatgc gcgacgcata aaactctggt agctgggtgg tctctccctc catataacgc
       61 cgcacggacc ggtcggtgtc gaggagaccc agaatggtct catgataccg gatccgcccg
      121 aacccctccg atgacacggc ccgtaccaca ttcatccact tcggaatcat cgtcggcgtc
      181 gccggaatcc ggcgagcgat ggccttccag gagaacgaat agcgggtgac atccaccaag
      241 tgcttgtaga actccggcca ggtgtagttc ttgggccgga cattcatggc gtggttgttg
      301 ttgaggaagt ggaatgggaa tgggagcacg cggccggcgc gctgataatc cagattcatc
      361 ggcgccgccc ggccgaaggc cgagagcagc gagtacgccg ggaacgctcc cggcgagaga
      421 tcgatgaact tcttggtcag ctcgaacggc tccggcccca tgtcgccatc cagccccatc
      481 acgaagttgg tctgaatgta ggggatgtag cgcagaatca tgttcacatg ctcggagacc
      541 tgcatgacct tgtccatccc ggtccggcgg gtcttcgact tgttgcccat gtcgtaccac
      601 gactcgatgc ccggaaggat tgcctggaag ccgttctttc gaagtcgctg gagatgcttt
      661 tcggataaga gcgacagact gctctcggcg atgtgccgga tccgcgcatc gggcaccgcg
      721 gactcgaccg cctccatgta gtcgtcgaac cgcactccga agttggggtc gtgccagccg
      781 acgattggat tcttgatctt ggtgagcaag aacttcagat cgtcgcgcag ctgctggaag
      841 ctcaatggct gataatccac cgtcgagtcg atgcagaagc tgcaggtgta ggggcagcca
      901 aggctgccga tcatcggcac gatcttgatg gtgggcgcct tggccagcgt cggctccacg
      961 aacttccacc gctcctccag cgtcggcagc tccagcggct gccgggcagc cgtcaagtgc
     1021 cggccgagcg gccgctgggg cgcacagtcc cggcacacct cggagatcgt gttccggtcg
     1081 gtgaagccga ggacgtagtc gtagtactta caggcgtcct cggggtagca cctcgcgtgc
     1141 ggtccgccca gcaccgtcac ggctccgcgc ttgcgaaaga agttgctcag cgcataggcc
     1201 aactgggccg actgggagaa tgcgccgatg aagacgagat cgagatcggg cgggagctcc
     1261 tcgagcagat cctccatgcc ggtatagcag acaaactgta cgtggtgccc ttcctgctca
     1321 caccaaacac cgacgacctg gggcatgatg ctcgcgagat tcgcgttcat cacccgacca
     1381 tacagcgacg ggttgggact cttcgttaca agatcgagaa tgccgatgcg aagtcggcgc
     1441 atgaataacc ctcgaattcg ggacgatcga tttcccttgg gcggccgcgg agcctgggcg
     1501 cccgaacgag cggaaggacc aaagaaggag cgttgccttg ggtaggatct catgccgctg
     1561 ggaagcggcc acaatcgagg tcgagcctga gaggcagcgc cgacgctttc atcaaatcgc
     1621 gcggctggaa gatgcccagg tggggtgcgg atagcaagcc gaggccgggc cgggcacgtg
     1681 gacccgcagt gccccgggcc tgatccggta gctgagcggc gattccaggg tgaacacttc
     1741 gccatcggtg gccacctgga gccggtgccg tctcgtctcg atcgtggctt catccaccgt
     1801 gagcaggtcc agctcgcgca cctgctcgac gccgtgaagc agcacctgta acgccaggcg
     1861 caacaatcct actcggcgct ccgcattgac cacgtagagc gcgaggtggc ccgaggccag
     1921 tgaatcgcgc gacgcgggct gcaatcctat catgcggtac tcgttgttcc cgaccaatac
     1981 aaacggggta cggcggacga tggcctgctc ctccgcgatg atccgaacgc caaggaacga
     2041 gttgcgccgc agtactgtaa ggctggccca gagtgccgcg atccacttgc tcaaaccggt
     2101 cgcctggtaa cgctcgcgaa gccgaacgac ggcggggtac acaccgagac tcgagttgtt
     2161 caggaagatg cggccgttga cctcccctgc gtctactttg cagacgatcc cgtccagcac
     2221 caccttggcg gcctcatcga gatcgagagg aatgcccaga tccttggcga agtggttgag
     2281 ggtgccgagt ggcaggatac cgagtgggac ctcacggccg atgaccacct gcgccgcggt
     2341 gttgatagtc ccgtcgccgc cgcccgccac gagcgtctca catccgccgt tcaccgcttc
     2401 ctccatcgcg gaacggatct ggtccccgct ctccgccacg gtgattcgag cctcccggtc
     2461 ggcggcggcg aagatctcct ccaggcgctt ggctgccgcg gcgcagtctc ctttgccgga
     2521 ggagccgttg agcacaaccg cgatccaccc tcccacctag accgtcctcc gacggcgccg
     2581 gtggctcacc agtcgatcgc cgaaggcaac cgctgccacc cacacggtgg cagcggcgta
     2641 tccggcgatg acgtcactgg ggtagtgcac accgagatac acccgcgaca gaccgaccag
     2701 caggatcagc gagaccgcca caatccagac agcggcccgg aagaaccggc tgcgcacccg
     2761 gtccgagacc agcacggcca acccgccgaa gaagctcgcg gcgaagaacg catgtccact
     2821 cgggaagctg tgagaggcgg gcagcggata atcgaaaaac gcggccggac gcccccgccc
     2881 aaaagactgc ttgagcagca ggtcgagcaa gccggcgccc gccatcgtta ccaccacgag
     2941 cagcgccccc cggtgccagc gcttgatcag gaacgcgagc gcgagcgcca ggccgatcgg
     3001 ggtgaggccg ccaggtccgc cataccggct caacgcgagc atgatcgcgg tcactggcgg
     3061 ggaggcgagc ccgtgcaccg ccagccggat cctgtcatcc agcaccggtg tcaccccggt
     3121 cagaatctcg cgtccgagcc aggaaaagag catgagtgcg gcggccgccg cgaggagccc
     3181 catgacgagc gcggcgctca gcagccgctc ggactccgct ggacccggcg gtggagatga
     3241 ggtcatggct gcaatgagtg cgggcgactg gcctccggca agcggcggga atactatggg
     3301 cgggtcttct tcgaggtttt tgtcatgcgg agacacggta tcacagtgct cggcctgctg
     3361 cttctgatca tcgcgctcat cattgtcgcc gtccttctgt tgcggtacct gcgggcatca
     3421 ggcgcttgat cagctggatc tgccccgtgt gatacaggtc gtgggcggcg acgccgtgga
     3481 tctcttcggc gtaggtccac acgcctttgg gcgagcgacg ctcgagatcg gccgcgctga
     3541 gcccagcgac cacctgccga agcttcccgt gctcggcctc gagcagcccg atgtctctct
     3601 tccacgcctt caagtcgggt ggatcgggta tatcgggcca gttgctcggc ttgcgctcga
     3661 acgatccggc tgcctcgccc gcaagccggc ggcgcacggc atacttccag taggcggcgt
     3721 ggatcgtcag ctcccagacg ttgtggcgat cagggccggg tcgccacagc gcctgggccg
     3781 gtgtcacgcc ccggagtgcc ccgcggagcg tggtgccatg ccatcctctc cggtcgaacg
     3841 cttgatccat gatctcgagc agcagctcga tgcgtggatc caccgcctgg cgcggcagcc
     3901 gtctggccat gtctcctccc gctgtggctc gcctagttgg accctcgcgg cgacgtgctg
     3961 aagacgaacc cttttcctac ggtcagaacc cagcctgagg gttcagcatc gttggcaaat
     4021 cgccgggcca ggtcgaatcg cagggcgggc gtatccgacg accggctggc gccgacgcgc
     4081 aatcccactc ccgcgtccca gccaacccgg cgcctcgagc ccgcgtacca agcgccgcca
     4141 tggtccacga accctgctat tcccagcccc acaacgccgc cgagatcatc gaccacggta
     4201 tacctgtact cggcggtggc gaagatggag cgatcgccgg tgaaggcgtg gcttccgaac
     4261 gcgcgggggc cactgcccag ccccaaatcg aactcctcac ccggcactgg attcctgagc
     4321 cagccaccct cgatgtgcat cacggcgaca tggcgagaac caggctggag cacgaccgtg
     4381 ccagcgagca ggacggaacc ggagtcgaga cccgccgtgc tgtagaggcc gttggctgcc
     4441 gcgtctacat gggcgaagcc gcccggcagg gtcgcaccga cgcggccatt caccgacggg
     4501 ccaattccgt cccggtcgta cccgaacgct cgcggcgcca gctgcagccc agcccggatc
     4561 gtgagaccga tgtccacgtc ctcttcccgg gcaaagccgg catagccacg ggtgacgatg
     4621 aacctggccc ggttccttac caggtagggc cccagtgacc cggtgaccgt cttcgagaat
     4681 ggtgcggtgg aggcttccgg cttgaagtca tcccgctgca cctgacccat gacgcccgcc
     4741 cgcaggtagc ctgcgctcga cgcgtgaacc gcccacgctg acgaggcgcg caccaggctg
     4801 aagcgacgag acagggtgtc ggaggggagc tcctgtccct cgaagaagcg gaggactcgc
     4861 tcccgatggt cttcggcctc gaagcggaat gcccggggcg agttgagcgc gaagaaaggc
     4921 cggtcgatga cgatggcgcc gactctgccg tccgagcgat tctcgtactg cagcccgagg
     4981 cccacggtgc ccaggaacat gcgggggcgc cgaaacaaga gtgccacgct ggatcggtcc
     5041 ggatccttgc ggtatcgcac tgccgcggtc gaggccgtcc ccagcaggtt ggtttccacc
     5101 agtccgatgg tgaaggccac ctcgccgccg gtgctgcgga atctccagtc cgcctgggtg
     5161 ctccagccat ccttggtgag cacccgaagc atgagaccgg tctgggtacg caccgagtcg
     5221 atctgcactc gccggaagat ccccagcgag cggaggttcc gttccgattc cgccaccaag
     5281 gcggagtcgt acggctcgcc gacccggaac agaagctccc gccggataat ggctggacgg
     5341 gtccggaagt gcagccggtt agcaagccgg gccagccagc tccgctcatt gggatcgaag
     5401 atgtcacgtc gctggagctg aacgccgcga atgatcgcgt ccgggtcggt aaccggcccg
     5461 gaatccaccg tagcctgggc gtgaagtgtg acgggtagaa gcaatgccgc caacggcagg
     5521 aagcgccgga aatccaaatg aaccccaagt agtgagctcg tgcagtgccg gaagataagc
     5581 ggggcttagt ccagctcggc gacgctctcg aggatacggt ccggcaggat ggcgctctcc
     5641 ctgagcgccg tctcacggta cttgccggtg cgaaccagcc atccctgcag ccctgcgcgc
     5701 tgggcaccct ccacatccga ccagagatcg tcccctatca tgacgaccga atccgcggac
     5761 tcgacctcga ggctctggag cgcggcggca tagaaggatg ggctcggctt cccagccacc
     5821 gcggcactct tcccggtggc aaactcgagc gcagccacga aggggccggc gtcgagcgcc
     5881 agacgatcct ggttccacca gtaccggtcc ctcgacaggg cgatgagttc cgctccggcc
     5941 atgacgtact cgaacgcttc ctgtagcagg gcataactcc agcgctcccc cagatccccc
     6001 acaataaccg cctggggcac acagccctga gaacggttgg acgtgccccc agacagctcc
     6061 aactcagcca tatcctgtaa ggccggctcc ggcataaacg gggcaatgca ccggtatccg
     6121 gctgtgcggg ccagcacgtt ccccgccagg gtggcggtaa acacatcttc gatcgagacc
     6181 tcgaagccat agccccgcag ccgctcgacc agcatcgcgc gggagcggct ggtcgtgttg
     6241 gtcaccaggc gaacgggaat gtgtcgccgg cgaagccggt ccagtgcggc gaccgctccc
     6301 gggatggcgg caccgccgga gtagagggtg ccgtcgagat ccagcaggta cccccgtggc
     6361 cggctcagaa cggctcccac ttatattccg aggcatgatg cccgtagccc cgctcatcgt
     6421 gcatacggcg ctcctcgccc ggctggcggc tccctaccca ttcagcgtgg gggagacgct
     6481 gcgctacgac gccaagctcg ggtatttccc ggtgggcgag gccactgtct cggtgactgg
     6541 gatggccaag gagcggggga gagagagttt cgtgttcacc atggctggcc agggaggccc
     6601 gccgggatgg cgggtccgct acgacatgac gtcctgggta ggcacccggc gcttccattc
     6661 tctccgtttt catcggcggc tcgagcaagg cggcaagatc gaggagcatg ggtacgtaat
     6721 cgttcccgac tcggcacgct accgcgagga gggggtccct ggtgactgga ccgctcctgc
     6781 cgatccgctc gatgagctcg cgtttctgta ctacttgcgg gccgcgccgc tggaggtggg
     6841 acggacctac agcctggccc gctatttcaa gaccgggtat aaccccatcg aggtgagcgt
     6901 cgccggccgc gaatccatcg cgatgccggg cggcacgacg acaccctgtc tggccctgcg
     6961 ggtctccacc cgggggacca cgatgcgggt ctggctcacc gatgacaccc gccggctgcc
     7021 ggcgcagctg gagatcccgc tgcccttcgg aagcgtgacc ctcacgctgg tgtctagtat
     7081 ctccccaggt aattctcgat ctcccagcgg ctgacctgaa ggttgtactg cagcacctcg
     7141 ttgcgcttgg cctccaggaa tctctcggtc aaatgctcgc ccagtgccgc cttgatcaca
     7201 tcgtccttct cgaacagctc cagggcctcg tgcaggtcgc ggggcaactc gtcgatccgg
     7261 tacttccgcc gatcgcgata gctcatggtg aagatgttcc ggctgaccgg ttcccgggcg
     7321 gtgaacttgt tctcgatgcc atcgaggccg gccgccagct gcaccgtcaa ggccaggtat
     7381 ggattgcagg agggatcggg catgcggagc tcgcaacggg ttcccagtcc gcggcgatca
     7441 ggaatgcgta ccagcggtga gcggttccgc atcgaccagg caacgttgac cggcgcttcg
     7501 tagcccggca ccaaccgctt gtagctgttg atcagggggt tggtgatagc gcagaagcca
     7561 cgggcgtgct ggaggaggcc ttcgatgtag ctcagggcag tctgcgacag ctggtattcc
     7621 gccttggggt cgtagaaggc gttgtccttg ccccgaaaga gcg
//
LOCUS       DASYRV010000290         2387 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1358974, whole genome shotgun sequence.
ACCESSION   DASYRV010000290 DASYRV010000000
VERSION     DASYRV010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2387
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1358974"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1075)
                     /locus_tag="VGQ24_07605"
     CDS             complement(<1..1075)
                     /locus_tag="VGQ24_07605"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEV8454739.1"
                     /translation="MERRGFLRVLSRGLAAGALLGESVPARAQGPSFPKSDAAAKYGG
                     EVPTASAPGVTAKEIKIGMSAAFKGTAGGLGSELYRGAQACYNEVNARGGIRGRSILV
                     VPLDDGYEPIPCINNTIQLIDKEGVFFLSNYVGTPTLTRALPVIKRYADQHVVLVGNF
                     TGAQPQREAPYGEHVFNIRASYRQEMTALVERFWQLGARKFGVYYQIDAYGRSGTDGV
                     ARGLARRGAKIVAEATYARGAKFEDDMSLAVKTLQEEGVDVVLCTGAYQGCGAFVKSA
                     RDLGWSVPISNVSFVGSDAMLGLLVKHRNSTGRDYTRALVNSQVVPSYEDLSLPAVTE
                     YRAFMDKYHPTVPESLRDPRYTPQ"
     gene            complement(1718..1954)
                     /locus_tag="VGQ24_07610"
     CDS             complement(1718..1954)
                     /locus_tag="VGQ24_07610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454740.1"
                     /translation="MSISSSTPEVRRMAEAITATLRAGPVFFMDLVRAHREAPYRTLL
                     LAWGKVRDRHRLSRDHDGRYFLDEGKGKSGAPNG"
     gene            complement(1941..>2387)
                     /locus_tag="VGQ24_07615"
     CDS             complement(1941..>2387)
                     /locus_tag="VGQ24_07615"
                     /inference="COORDINATES: protein motif:HMM:NF044283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454741.1"
                     /translation="AMAWAALKTAGVQATAVRVTPGGCCHFEIIASIKKRAGEGKNAL
                     LALLSLGIVKWAIVTDDDVDITNQDELDWAVTFCVQADKDIYILPGMRGKHLDPSVRA
                     WELPKGEVPVTAKFGIDATRPEGIDRIHYERPVVSRFAAVRADEYF"
BASE COUNT          415 a          802 c          734 g          436 t
ORIGIN      
        1 tctggggggt gtacctggga tcccggaggg actccgggac cgtgggatgg tatttgtcca
       61 tgaaggcgcg atactccgtg acggcgggga ggctcaggtc ctcgtagctt ggcacaacct
      121 gtgagttaac gagtgcccgc gtgtaatccc gcccagtgct gtttcggtgt ttcaccaaga
      181 ggcccagcat ggcgtccgac ccgacgaatg aaacgttgga gatcggaacg ctccagccga
      241 gatccctggc cgatttgacg aaggcgccac agccctggta cgcgccggtg cacagcacca
      301 catcgacacc ctcttcctgc agcgtcttca ccgcaaggct catgtcgtcc tcgaacttcg
      361 cgccccgcgc atacgtcgcc tcggcgacga tcttggctcc ccgccgcgcg agaccacggg
      421 ccacgccgtc agtgccgctg cgcccgtagg cgtcgatctg gtagtagacg ccgaacttcc
      481 gcgcaccgag ctgccagaag cgctcgacca gcgccgtcat ctcctgacgg tacgaggccc
      541 ggatgttgaa gacgtgctcg ccgtaggggg cttcccgctg gggctgggcc ccggtgaagt
      601 tcccgaccaa gacgacgtgc tggtccgcgt accgtttgat caccggcaac gctcgggtca
      661 gcgtcggggt cccaacgtaa ttggagagga agaagacgcc ctctttgtcg atgagctgga
      721 tggtgttgtt gatgcacggg atcggctcgt acccgtcatc cagcggcacc accaagatgg
      781 aacggccgcg gataccgcct cgcgcgttca cctcgttgta gcaggcttgg gcaccccggt
      841 ataactcgct gcccaggccc cccgccgtcc ccttgaaggc ggcgctcatg ccgatcttga
      901 tctctttggc tgtcacgccg ggggcgctgg cggtagggac ctcgccgccg tatttggccg
      961 ccgcgtcgct cttcgggaag gaggggcctt gcgcccgggc cgggacgctc tcacccagta
     1021 gtgctccggc tgcgagacct ctactcagga cacgaaggaa tcctcggcgt tccatgtgcg
     1081 acctccgttg catcttgctg ccacttttca tatatgggga atcatcagcg ctcagcgacg
     1141 attcctccca ggaagctgag cccgatgagg tagctcgcca ctgcactccc gatcacgatc
     1201 cgccagcctc tctgctgcac acggttcttc ccgatgcatt catttccgaa cggagcacca
     1261 gcggccgttg accgggcggc cgtagacacc gcagatcttc ttggcaatcc gcagggcgat
     1321 gatcgcgatc tctcgtccgc agctcaaaac tgtggagaga gcaatagtgg tgacatgagg
     1381 tcgtgccagt tcttccgccg tgcagaatct agccgacgtt ggctggcctg cctattagac
     1441 cttggtccaa ccggacggac caaccggtct gtgtccgaac aacgccgcct gggcgatggg
     1501 tgtcgacccc ctggccgggc caagcgctgc cgccgcgcgg cgtgtcaccg aggcgcaaca
     1561 gccgacgcag cgccgccgac cgatcccaag aagaaagcag agggattgta ggacaagacc
     1621 aatcgcctca ttggaccaaa gtccaatacc tgccagcaga acccaggtta ccgtccgccg
     1681 tagatcaaca tcatgcgagc tgtcgccacg ccggctgcta gccgttcggg gctccggact
     1741 ttcctttacc ctcgtcgagg aagtagcggc cgtcgtggtc tcgcgagagc cggtgtcggt
     1801 cgcggacttt cccccaggcg agcaacagcg tccggtaagg cgcttcccga tgggcacgca
     1861 cgaggtccat gaaaaagacg ggccccgcgc gcaaggtggc agtgatcgcc tctgccattc
     1921 gccgcacctc gggggtggag ctagaaatac tcatccgcgc gcaccgcggc gaatcggctc
     1981 accaccggcc gctcgtaatg gatcctgtcg atgccctcgg gccgggtcgc gtcgatcccg
     2041 aacttcgcgg tcaccggcac ctcgcctttg gggagctccc aggcgcgcac gctcggatcg
     2101 agatgcttgc cccgcatgcc gggcaggatg tagatgtcct tgtccgcctg cacacaaaac
     2161 gtcaccgccc agtcgagctc gtcctggttt gtgatgtcca cgtcgtcgtc ggtgacgatg
     2221 gcccacttca cgatgcccaa ggagagcagg gcgaggagcg cgttcttgcc ctcgcccgcg
     2281 cgtttcttga tggacgcaat gatctcgaag tggcagcagc cacccggcgt cacccgcacg
     2341 gccgtcgcct gcacaccggc cgtcttgagc gccgcccacg ccatggc
//
LOCUS       DASYRV010000291         5871 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_950072, whole genome shotgun sequence.
ACCESSION   DASYRV010000291 DASYRV010000000
VERSION     DASYRV010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5871
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_950072"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(574..1929)
                     /locus_tag="VGQ24_07620"
     CDS             complement(574..1929)
                     /locus_tag="VGQ24_07620"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEV8454742.1"
                     /translation="MSESYDLIVIGTGAGGTGPALRCRQAGWQVAVVDDEPYGGTCAL
                     RGCDPKKVLVGGAELVDWHRRMTGSGISGDTRIDWPTLMRFKRTFTDPVPASRETALR
                     DAGIATHHGIARFIGEDRLIVGDRELQARHVVIASGAEPRRLGIPGEEYLRTSTDFLA
                     LDELPPRIALIGAGYIAFEFAHIARRAGAEVVMLGREKALASFDQDLVQRLVAHTGAL
                     GVDVRLNAPATAIETGIAGYRVHFGGPSSDHSSVEADLIVHAAGRVPKTRQLDLPSAN
                     VRTDERGAVEVNEFLQSVSNPRVYAVGDAALPPGSVPLTPVASHEGLVVASNLLHGNR
                     KTPDYRGIPSVVFTVPPLARVGPTEPEARQQRLTVRVKSEETTGWFANRRVNESTAMY
                     KTIVEEGTQRVVAAHLLGPHAEEVINIFALAVRHGLTAPALAHMIYGYPTSASDVAYM
                     F"
     gene            complement(1940..2578)
                     /locus_tag="VGQ24_07625"
     CDS             complement(1940..2578)
                     /locus_tag="VGQ24_07625"
                     /inference="COORDINATES: protein motif:HMM:NF013695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEV8454743.1"
                     /translation="MTGALAASRPALVRRGLRLNYVTIAYNTLEAIVSLAAGLAAGSI
                     ALIGFGVDSIIEVTASVAAQWRLRADLNPIRRERVEHLTIRIIGGTFLALAIYVAYES
                     ITTLAAREEPDGSVVGVILLSMSVIVMPLLARAKRHVAAALGSSALTADATQTTLCAY
                     LSVIALAGVGLNTLLDWWWADPLAALAMVPIIVKEGVEGLRGKTACAECAAG"
     gene            complement(2580..3035)
                     /locus_tag="VGQ24_07630"
     CDS             complement(2580..3035)
                     /locus_tag="VGQ24_07630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454744.1"
                     /translation="MKALYMALAAGLMALAACSKPKEEPAADTGRGMAMDSGRMDGMA
                     GMGRSGMMSMMPAHMDSMMRMSPEQMSQMMARHERMMSQMMDQMGGEMRQMKMAETPE
                     WSALTDSVRQDLAELPNLKGQALSARMRAHIGRVQRLIATHEGMMKGMR"
     gene            complement(3032..>5871)
                     /locus_tag="VGQ24_07635"
     CDS             complement(3032..>5871)
                     /locus_tag="VGQ24_07635"
                     /inference="COORDINATES: protein motif:HMM:TIGR00914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CusA/CzcA family heavy metal efflux RND
                     transporter"
                     /protein_id="HEV8454745.1"
                     /translation="LNSVQSKLPAGAETELGPDATGVGWVYQYALEGSGYTPAQLRTT
                     QDFQVRYALQGVPGVAEVASIGGFVRQYQVLLDPARLRAFGVTAQQIVAAVRGANQDV
                     GARTVEVAGSDYAIRGLGYFRGTRDIADVAVGAGTGGRPIRVGDVAQVTIGPDLRTGI
                     AERNGQGEAVGGVVVMRVGANALDVVGRVKAKLADLAPSLPPGVRVVTTYDRTDLIHR
                     SIATLFRTLIEESTIVGLVCVLFLLHARSALVAIATLPLGILAALALIRWMGINANIM
                     SLGGIAIAIGAMIDAAIVMIENLHKHMERADRRTGGQGDGAEDHWRLVSKAAIEVGPT
                     LFMSLLIITLSFLPVFTLEDQEGRLFRPLALTKTFAMAAAALLSVTVVPVLMGFLIKG
                     RIRPEAANPLNRWAARVYRPVLRWSLKARVLVIVGAVAAFALTLIPFAGLGSEFMPPL
                     REGSLMYMPNTLPSVSLTQQRRLLKVQDSILMTFPEVESVWGKAGRANTATDWAPISM
                     VETTINLKPLSEWRPGMTQDALIAEMDRALRITGAVNSWTMPIKNRTDMLSTGVRTTL
                     GIKIYGPDLEVIQRVGHDLEGALSSLRGTGSIYAERSFGGRYLDIRPKADALARYGLT
                     TGDVQEVLGIALGGDLVTTTVEGRERFPVQVRYAREFRDSPEAIGRLLVSSKDGIQVP
                     LAQVADIGFAAGAPMIRSENGYLNDLVSIDVRGRDVGGYVADAKQVVARQVKIPPGYR
                     LEWSGQYEALERVKARLEVVVPLTLAVIALLLYLTFGSVVETGIVMLSLPFALIGGVW
                     AMWLLDYNLSIAVAVGFIALAGVAAETGVVMLLYLDHAWQEITRDGRKPSRADLVGAI
                     EYGAVNRLRPKLMTVAAIMLGLLPALWSHGTGAEVMQRIAAPMVGGMVTSTILTLVVI
                     PVLYYLWRRHGLEKVVLDFPYRGETSLSVKR"
BASE COUNT         1093 a         1962 c         1795 g         1021 t
ORIGIN      
        1 ggccgccagg gcggccgtgc gtagactgaa catgatctga ttctcctatc catgtggttc
       61 cggcgagcta ccgagctgcc gggcagaacc ggcctaggag atcagttgcg gaggtggggt
      121 tggtggctga tgggtcgtgg aatacagatg gtgctgtagt ctagggaaaa catctcgatg
      181 ggtagccgac tgagtgaccg caggtgacgt taccgagacc gcggcactcg aggaggtggt
      241 acagggggca agccgagcac actccgtggc ggggcagtgt gggcaatcgt gtctggtggc
      301 gctctcccag gatgccggac gaaccggttc tggcatctgg tgctcgccgc cagagtgcgc
      361 cacttgaggt agtgcggagg gcgcgtgctg agcgcagtgt gggcgctgca tcgtcgccgg
      421 cccaatgctg ggcacgctca gaatgccgag gaccagcatc agagcccccg tgatcgggct
      481 cactcgcaaa gcggtaagac taggcatcct acatctccca aggggcagca tagccagtct
      541 ggtgctgcct cgcaaccagg cggcaaccac ctcctagaac atatacgcca catctgacgc
      601 gctcgtggga tacccataga tcatgtgcgc aagggccggt gccgtcagtc cgtgccgaac
      661 cgcgagagcg aagatattga tgacttcttc tgcgtgcgga ccgagcagat gagcggccac
      721 cacccgctgg gtgccttcct ccacaatcgt cttgtacatc gcggtactct cgttgacccg
      781 cctgttggcg aaccaccctg tggtctcctc tgacttgacg cgtacggtca gccgttgctg
      841 tctcgcctcg ggctcggtgg ggccgaccct tgccagggga ggcaccgtga acactacgct
      901 cgggatcccg cgatagtccg gggtcttccg attgccgtgc agaagattag atgccacgac
      961 caggccctcg tgggaggcca ccggcgtcag cggcaccgat ccaggcggca gcgccgcgtc
     1021 ccctacggca tagaccctcg gattcgagac actctgtagg aactcgttca cctcgaccgc
     1081 cccgcgctcg tccgttctta cgttcgcgct tgggaggtca agctgccggg tcttcggtac
     1141 ccgtccggcc gcgtgcacta ttaggtcggc ctcaaccgac gagtgatcac tgctcgggcc
     1201 gccaaagtgc acccggtatc cagcgatgcc cgtttcgatg gccgtggccg gcgcgttcag
     1261 gcgcacatcc acgcccagcg ccccggtgtg ggcgacgagt cgctgcacca agtcttggtc
     1321 gaagctggcg agtgccttct cccggcccaa catgacgacc tccgcaccgg cacgccgtgc
     1381 aatgtgggca aactcaaacg ctatgtagcc agccccgata agggcgatcc gcggcggaag
     1441 ctcgtccagc gccaggaagt cggtactggt ccgcagatac tcctcgccgg gaatgccgag
     1501 ccgcctcggc tcagcaccgc tggcgatgac gacgtgccgc gcctgcagct cgcgatcacc
     1561 cacaatgaga cggtcctccc caatgaaccg ggcgatgcca tggtgcgtgg cgatcccagc
     1621 gtcccgaaga gccgtttccc ggcttgccgg taccggatcg gtgaaggtgc gcttgaatcg
     1681 catgagcgtc ggccaatcaa tccgcgtgtc gccggagatg cccgagccgg tcatacggcg
     1741 gtgccaatcc accagctcag ccccgccgac gagcaccttc ttgggatcgc agccgcggag
     1801 ggcgcaggtt ccaccgtagg gctcatcatc gacgaccgcg acctgccagc cggcctgccg
     1861 gcaacggagt gcgggcccgg tgccgccagc gccagtgccg atcacgatga ggtcgtagga
     1921 ctcggacata agcgcgctct tagccggcag cgcactcggc gcaggcggtt ttcccccgca
     1981 gcccttcaac cccttccttc acgatgatcg gcaccatcgc cagggccgca agagggtcag
     2041 cccaccacca gtcaagcaag gtatttaggc cgactcccgc gagcgcaatg acagacagat
     2101 aagcgcagag cgtggtctgc gtcgcgtcag cggtcagcgc gctgctaccg agggcagcgg
     2161 ccacgtggcg tttggcccgc gccaagaggg gcatgacgat cacggacata ctgagcagga
     2221 tgacacccac cacgcttccg tcaggctcct cccgggcggc cagcgtggtg atgctttcat
     2281 aggcgacgta gatggccagc gccaggaaag tgccgccgat gatccggatt gtgaggtgct
     2341 cgacgcgctc acggcgaata gggttgaggt cggcccggag ccgccactgg gccgccacgc
     2401 tggcggtgac ctcgatgatg ctgtccactc cgaacccaat gagcgcgatg ctgcccgcgg
     2461 cgagcccagc agcaagcgac acgatggctt cgagggtgtt gtacgcaatg gtcacgtaat
     2521 tgagccggag tccccggcgc accagagcag ggcggcttgc ggcaagggcc cctgtcatct
     2581 caacgcatgc ccttcatcat tccctcgtgt gtggctatca gccgttgcac ccggccgatg
     2641 tgcgcccgca tccttgccga cagcgcctgg cccttgaggt tcggcagttc ggcgaggtcc
     2701 tgcctgaccg aatcggtcaa cgcgctccac tccggggtct ccgccatctt catctgccgc
     2761 atctccccgc ccatctgatc catcatctgc gacatcatcc gctcatgccg ggccatcatc
     2821 tgcgacatct gctccggact catccgcatc atggagtcca tgtgcgccgg catcatggac
     2881 atcatgccag accttcccat acccgccatc ccatccatcc taccgctgtc catcgccatg
     2941 ccacgaccgg tgtcggctgc aggctcttcc ttcggcttgc tacatgcagc caatgccatg
     3001 agaccagcgg ccagcgccat gtaaagtgcc ttcatctctt cacgctcagt gaggtctcgc
     3061 ctcgataggg gaagtcaagt accaccttct ccagtccatg gcgacgccac aggtagtaaa
     3121 gcaccggaat cactaccagc gtaaggatgg tggaagtcac catcccgccc accattggtg
     3181 ccgcgattcg ctgcatcacc tcggccccgg tgccgtggct ccagagtgcc ggcaagagac
     3241 cgagcatgat cgccgccacc gtcatgagct ttggtcggag acgattcacc gcaccgtact
     3301 cgatcgcccc taccaggtca gcccgagacg gcttcctccc atcacgggtg atctcctgcc
     3361 aggcatgatc gaggtagagc agcatgacaa ccccggtttc tgctgcgacg ccggctaggg
     3421 cgatgaaccc aacggccacc gcgattgaga gattgtaatc caacagccac atggcccaga
     3481 cgcctccgat cagcgcgaag gggagcgaga gcatgacaat ccctgtctcg accacgctcc
     3541 cgaaggtgag atagagcagg agcgcgatga ccgcgagggt gagcggcacc accacctcga
     3601 gccgcgcctt gacgcgctcc agcgcctcat actgtccgct ccactccaac cggtaccctg
     3661 gtgggatctt cacctgccgg gcgacgacct gcttggcgtc ggccacgtaa ccacccacat
     3721 ctcggccacg gacatcgatc gagacgagat cattgaggta gccattctcg cttcggatca
     3781 tcggtgcacc agcagcgaag ccgatgtcag ccacctgggc cagtggcacc tgtatcccat
     3841 ccttgctgct taccaggagc cgcccaattg cctccgggct gtcccggaac tcgcgggcgt
     3901 agcgcacctg gaccgggaac cgttcgcggc cttccactgt cgtggtcacc agatcgccac
     3961 caagcgctat gccaagcacc tcctggacgt cccccgtggt gagcccatac cgcgcgagtg
     4021 cgtcagcttt gggcctgata tcaaggtacc ggccgccgaa cgagcgctca gcatagatac
     4081 tgcccgtacc ccggaggctg gagagcgcac cctcgagatc gtggccaacg cgctgaatga
     4141 cctcgagatc gggcccgtaa atcttgatgc cgagcgtggt ccgtacaccg gtggagagca
     4201 tatcggtccg gttcttgatc ggcatcgtcc agctgttcac cgcccccgtg atccggagcg
     4261 cgcgatccat ttccgcgatg agcgcgtcct gggtcatccc aggccgccat tcggagagcg
     4321 gcttcagatt gatcgtagtc tcgaccatgg agatcggggc ccagtcggtt gcagtgttgg
     4381 cccgacctgc cttcccccac accgactcca cctccggaaa ggtcatgagt atgctgtctt
     4441 gcaccttcaa taaacgccgc tgctgggtga gggagacgct gggcagggtg ttcggcatgt
     4501 acatgaggct accctcccgg aggggaggca tgaattcgct gcctagacct gcgaagggaa
     4561 tgagcgtcaa tgcaaatgcc gcgaccgcac cgacgatgac cagcaccctg gccttgagcg
     4621 accagcgcag cactggccgg tagacccggg ccgcccagcg attcaagggg ttggcagcct
     4681 cgggacgaat tcggcccttg atcaggaagc ccatgagcac cggcacgact gtcactgaga
     4741 gcagcgccgc cgcggccatg gcaaaggttt tcgtgagtgc cagcggccga aacagacgtc
     4801 cctcctgatc ctccagggta aaaaccggaa ggaacgacag cgtgatgatg agtagcgaca
     4861 taaacagtgt ggggccgacc tcaatcgctg ctttggatac cagtctccag tggtcttcgg
     4921 ctccgtcccc ctgtccgcct gtccgcctgt ccgcccgctc catatgcttg tggaggttct
     4981 cgatcatcac gatcgcggcg tcgatcatgg cgccaatggc gatggcgatg ccaccgagcg
     5041 acatgatgtt ggcgttgatg cccatccacc ggatgagcgc gagtgcggcc aggatgccca
     5101 gcggcagggt cgcaatcgcg accagggcac tccgggcatg gagcagaaag agcacgcaca
     5161 cgagccccac aatggtcgat tcctcgatga gcgtgcgaaa aagagttgcg atggaacgat
     5221 gaatcagatc ggttcgatcg taggtggtca cgactcgcac acccgggggt agggacggcg
     5281 cgaggtcagc cagcttggcc ttgacccggc caaccacatc gagcgcgttc gcgccaaccc
     5341 gcatcaccac gacgccaccc acagcctcgc cctggccatt ccgttcagcg atgccggtcc
     5401 gtagatcggg cccgatggtc acctgcgcca catcgccgac ccggatcggt cgtccgccgg
     5461 ttcccgcacc gaccgcaacg tcggcgatgt cccgcgtacc gcggaagtag cccaggccgc
     5521 gaatcgcgta atcgctcccg gccacttcga ccgtgcgagc acccacgtcc tgattggcgc
     5581 cacgcaccgc tgcgacaatc tgctgtgcgg tcaccccgaa ggccctgagc cgggcggggt
     5641 cgaggagtac ctggtactgc cgaacgaatc cgccgatgct cgccacctcg gcgacaccag
     5701 ggacaccctg cagggcgtac cggacttgga agtcctgggt ggtcctcaat tgggcaggag
     5761 tgtacccgct gccctcgagg gcatattggt acacccagcc gacgccggtc gcgtccggac
     5821 cgagctcggt ttcggctcca gccggaagct tcgattggac ggagttgagg c
//
LOCUS       DASYRV010000292         2750 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_4057489, whole genome shotgun sequence.
ACCESSION   DASYRV010000292 DASYRV010000000
VERSION     DASYRV010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2750
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4057489"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..463
                     /locus_tag="VGQ24_07640"
     CDS             <1..463
                     /locus_tag="VGQ24_07640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454746.1"
                     /translation="TFVWSMDREEMVDGVAYYVVKSGNTRELYYRKSDFAYYMDKVNG
                     QVETRHTPPTAFFAWPLVSGAKMEVHYTRERPLDRQTQEMSLTCETGPVESVTVQAGT
                     FDAVKVACRNSRTDTPNFEVWLSTATKQMVRERTWFSYGVRERELIGLKLR"
     gene            complement(589..903)
                     /locus_tag="VGQ24_07645"
     CDS             complement(589..903)
                     /locus_tag="VGQ24_07645"
                     /inference="COORDINATES: protein motif:HMM:NF019590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HEV8454747.1"
                     /translation="MITCYLRYTIDPYKLEAFERYSRMILPLAAKYGGVHHGAFLPHE
                     GPNNIAVHLFSFPSLAEYERYRTAVRGDDVAKAAWRLAEETRCIVSFERSFMRPVFAD
                     DQ"
     gene            complement(900..1100)
                     /locus_tag="VGQ24_07650"
     CDS             complement(900..1100)
                     /locus_tag="VGQ24_07650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454748.1"
                     /translation="MPELLAALDAFMQEHRRCGELDGGVDDGRVWMACDCGAGIAHPV
                     EAPKRRRAIFGAGGWLNREEPR"
     gene            complement(1111..2088)
                     /locus_tag="VGQ24_07655"
     CDS             complement(1111..2088)
                     /locus_tag="VGQ24_07655"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEV8454749.1"
                     /translation="MDRRAFLATLSGGLLAAPLAAEAQTAGKTARVGWLALGPNTGPA
                     AAFFDAFREGLRERGWIDGRNLVIEARWGNRDQARDQVAELVQWKPDVLVTQGPMVFG
                     ARAVTGPIPVVFGFSGDPVEGKLVASLARPGGSLTGISFMQFELIGKRLEVLKEAVPG
                     LTRVALLANTGHPGVQEELARSQAAARRLGFTVQYVPVAAVRDFEAAFEAMARERAEA
                     IVVFPDGFMMSQAPAIADFAARRRIAAISGWAEFATAGNLLSYGPDLREAWRAVAVYV
                     DKILRGARPADLPVEQPTKFELVINLKTAKALGLTIPPSLLQRADQVIE"
     gene            2501..>2750
                     /locus_tag="VGQ24_07660"
     CDS             2501..>2750
                     /locus_tag="VGQ24_07660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454750.1"
                     /translation="MEVRDALLLLAVGAVVAGSVYFTIRDWRKLPPSQRARSTGVGDA
                     VEGLLGCLGGLAGCLFYLVVALVGLFFMVWLVKRMWEAA"
BASE COUNT          459 a          906 c          915 g          470 t
ORIGIN      
        1 aaccttcgtc tggtcgatgg accgcgagga gatggtagac ggtgtggcct actacgtagt
       61 caagtccggg aacacgcgag agctctacta ccgcaagagc gacttcgcct actacatgga
      121 caaggtgaac ggccaagtcg agacccgcca tacaccgccg acagcattct tcgcgtggcc
      181 acttgtatcc ggagcgaaga tggaggtcca ctacacgcga gagcggccgc ttgaccgcca
      241 gacccaggag atgtctctca cctgtgaaac cggcccagtc gagtcggtga ccgtccaggc
      301 gggtactttc gatgcggtga aggtcgcctg tcggaacagc cgtacggata cgcccaactt
      361 cgaagtgtgg ctctccacgg cgaccaagca gatggtacgt gagcgcacat ggttctcgta
      421 tggagtacgt gagcgggagt tgatcggcct gaaactgcgg tagccgtaga aagcccgaag
      481 gggcagcctc aagagggcgg cccctcccct tcgggcgatg gccgggcgcc tcggctcgcg
      541 cccggttagc gggagcttac cgccgctctc cgcgctgggc ctgggtggtc attggtcatc
      601 agcgaacacc gggcgcatga agctccgctc gaaactcacg atgcaccggg tctcctcagc
      661 caggcgccat gccgccttcg cgacgtcgtc accccgtacc gcggtccggt agcgctcgta
      721 ttcggccagc gaagggaagc tgaacaggtg caccgcgatg ttgtttggcc cctcgtgcgg
      781 caggaaggca ccgtggtgca cgcctccgta cttcgcggcc agtggcagga tcatccggct
      841 atagcgctcg aacgcctcga gcttataggg atcgatggtg tagcggagat agcacgtgat
      901 caccgcggct cctccctgtt cagccagcca ccggcgccga atattgcccg gcgccgcttt
      961 ggcgcctcga ccgggtgcgc gatgccggcc ccgcagtcgc aggccatcca gacgcgccca
     1021 tcatccacgc cgccgtccag ctcaccgcaa cggcggtgct cctgcatgaa ggcgtcaagg
     1081 gcggcgagta gctcgggcat ggcggttggt ctactcgatc acctgatccg cccgctgcag
     1141 gagcgacggc gggatcgtca gcccgagggc cttggcggtt ttcaggttga tcaccagctc
     1201 gaacttggtt ggttgctcca cgggcaggtc ggcgggtcgg gcgccacgca ggatcttgtc
     1261 cacgtagacc gcgaccgcgc gccacgcctc acggaggtcc ggaccatatg acagcaggtt
     1321 gccggccgtg gcgaactcgg cccagccgga gatcgcggcg atgcggcggc gcgccgcgaa
     1381 gtcggcgatg gcgggcgcct ggctcatcat gaacccgtcg ggaaagacca cgatcgcctc
     1441 ggcacgctcg cgcgccatgg cttcgaacgc agcctcgaag tcgcgtaccg cagccacggg
     1501 cacgtactgc acggtgaacc cgaggcgccg cgcggcggcc tgtgatctgg cgagctcttc
     1561 ctgtactccc gggtgtccgg tgttggccag gagggcgacg cgtgtcaggc ccggcacagc
     1621 ctccttgagg acctcgaggc gcttgccgat cagctcgaac tgcatgaacg agatcccggt
     1681 gaggctcccg cccgggcggg caagactcgc gaccagcttg ccctcaacgg gatcgccact
     1741 gaagccgaag accaccggaa tcggacccgt cacggcccgg gctccgaaca ccatcgggcc
     1801 ctgggtgacc agaacatcgg gcttccattg cacgagctca gccacctgat cgcgcgcctg
     1861 gtcgcggttg ccccagcggg cctcgatgac gaggttccgg ccatcgatcc agccgcgctc
     1921 gcgcaggccc tcccggaacg cgtcgaagaa ggcggccgcc ggccccgtgt tggggccgag
     1981 agcgagccag ccgacacgcg ccgtcttgcc cgccgtttgc gcctcggcgg cgagcggcgc
     2041 ggcgaggagg cctccgctta gggtcgcgag aaacgcacgc cggtccatcc cggcgaactt
     2101 acaccaacgg ggcggggtgt gtggacgatt taccagctag gtcagcgtga gctgctgacc
     2161 gcatggagta tccgccggcc cctcaacctg cgtcacgtgc gccacgtcca tcggagcgag
     2221 ctgcggatgg agcctgctca ccgaccgcgc cgcccactca gaggagcact ctcgctccca
     2281 gccgcaggag cagacgacga gccagcgcgg cggtgatgca gaactcgctg ccatcctagc
     2341 ctccgcttct gccaccatga gcagtcgcca gtgcttcatg gtccgattag gccgacgctt
     2401 gatccgtccg tcaagatgta tggagaggga tacgcttgat gggtgttggt gaagcggctg
     2461 gtggtaaccc cgtcgcttct tcggatatgc tcgtccatct atggaagttc gtgatgccct
     2521 gctcctcctg gcggtcggtg ctgtcgtggc cgggagtgtc tacttcacga tccgtgactg
     2581 gcggaagctc ccaccgtcac aacgcgcccg ctcgacgggg gtcggggatg cggtagaagg
     2641 cctcctcggg tgtctcggcg ggttggccgg ctgtctcttc tatctcgtgg tcgccctcgt
     2701 ggggttgttc ttcatggtct ggctcgtcaa gcggatgtgg gaagcggcgt
//
LOCUS       DASYRV010000293         3947 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2344745, whole genome shotgun sequence.
ACCESSION   DASYRV010000293 DASYRV010000000
VERSION     DASYRV010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3947
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2344745"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /locus_tag="VGQ24_07665"
     CDS             complement(<1..363)
                     /locus_tag="VGQ24_07665"
                     /inference="COORDINATES: protein motif:HMM:NF024376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HEV8454751.1"
                     /translation="MERRRFMLVVIALVAAVSVVASGPAGHGADAPLHLVLTPSQKPT
                     DLLAAGEEFGQALGKLVGVPVRVTVASDYAAVIEALRNRTADLAFVHPAGYVLANREA
                     KAIILARNLWHGKSSFTSR"
     gene            complement(672..1694)
                     /locus_tag="VGQ24_07670"
     CDS             complement(672..1694)
                     /locus_tag="VGQ24_07670"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEV8454752.1"
                     /translation="MPRSRAIKALAITTVAVLALAFPAMAPNPYVIHVVTVGLIYAIL
                     AASWDFLYGYAGQLSFGHAGFFGLGAYTSALLSLYLDLSPWVGLLCGGGASALFGAVV
                     GYPALRLKGSYLALATLAFGEIARIIATNWQDVTRGTLGLSGFPAFPGIPYSRPAYYY
                     LALALAVVCVGTMAYLGNHSRIGLVMRSVRADEIRANTLGVNILVYKVFAYVMCAFFA
                     GIAGGFYAHYIQVITPNELGPTVSIFTITMATIGGIGTIYGPAIAGVLFESLYEYMRG
                     IGVVYNLVAVGALLISFVILLPRGLAGVARSWWLPPHPHPIQPDESGPSASPALSAAS
                     TDQEAS"
     gene            complement(1718..2599)
                     /locus_tag="VGQ24_07675"
     CDS             complement(1718..2599)
                     /locus_tag="VGQ24_07675"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEV8454753.1"
                     /translation="METVVNFTLAGILTGGVYALIGVGLALIFGVLRFINMAHGDLLA
                     VGAYCSVVYAVVTGGGGAAGTLGAALVIVLVLGMLIQRTLIQPITREGRTDERRGLVL
                     SLGLSMFLSNAILAVFGADYLKVPPLISGALQLGEVTVQYQRLLALVASTVLTGALLA
                     FLQWTRLGTAIRATAVNPQAALASGIDIRRVHAIAFGIGSGLAAVAGALLVPIIYAMP
                     SMGLPLTIKGLVIVILGGLGSIPGALIAALMLGIAESLAVLWLPGGFHDLLAPVSMLL
                     VLLLRPSGLLGRNVTRF"
     gene            complement(2613..3365)
                     /locus_tag="VGQ24_07680"
     CDS             complement(2613..3365)
                     /locus_tag="VGQ24_07680"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEV8454754.1"
                     /translation="MSPEILLEVKGVSSGYAGSTVLQGVDLTVYQGSITAVIGPNGAG
                     KSTLLKTIMGFLTLDRGAVFLRGESLVRWRVEDRVRRGVAYVSQDRCSFGPLTVAENL
                     RVGAFLERDRSVVRRRMQAVYERFPALRMRQHQPAGLLSGGELRTLEIGRFLMMKPEL
                     VLLDEPSIGLAPLLVDQVYREVEQLRREGLTFLIVEQNVRKILQVADLVYVLELGRNR
                     FAGAPSEITADDKLARLYLGAGIKPPAASSPR"
     gene            complement(3367..>3947)
                     /locus_tag="VGQ24_07685"
     CDS             complement(3367..>3947)
                     /locus_tag="VGQ24_07685"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEV8454755.1"
                     /translation="DLLSGLEMPSAGEVRFKGTPIARGKPHLVARAGLGRTFQIVRVF
                     RDLSVMENLMVAGMSRATGARTFDARRAVELLALVRLDRYGDQPAQELSYGQQKLLEL
                     AVVLMSEPELLLLDEPVAGVAPALTAVMSALLVHLLSAGRTLIVVEHNVPFVLENCRR
                     VIVLNYGQKIADGRGEDVQRDPRVLEAYLGGG"
BASE COUNT          734 a         1334 c         1328 g          551 t
ORIGIN      
        1 ccgtgacgtg aacgacgact tcccgtgcca gaggtttctc gccaggatga tggccttcgc
       61 ctcgcggttg gcgaggacgt agccggcggg atggacgaac gcgaggtccg cggtccggtt
      121 ccggagcgcc tcgatcaccg ctgcgtagtc cgaggcgacc gtcacgcgga ccggcactcc
      181 cacgagcttg ccgagcgcct gcccgaactc ctcgccggcg gcgagcaggt cggtgggctt
      241 ctgcgacggt gtcaggacca gatggagcgg cgcgtcggcg ccgtgccccg ccggcccgga
      301 agcgaccacg ctcaccgcgg cgacgagcgc gatcaccacg agcatgaacc gccgtctctc
      361 catccggtcc tccctcacgt tggcgtcctc tcgagccgac acgagcatag acgaccgggg
      421 cgccaatgac ctaccggcgc cagcgcggca tggttccgcg ctcgcgcgcg agcgcgcgga
      481 tgcgcgcgtc gacccattgg tcgcggtccg cgttcgcctc ctcgatcgag cggaagcgac
      541 gaacgcctcg aggcatcgaa gaccgagaca gctccacgaa cctcccgaag tccatcgtgc
      601 gagtgcaagg tgagcattcg cgtgcccccg ctccctggtc atgtgcgcgt caccactaac
      661 ccttggatga tctatgaggc ctcctggtca gtggaagccg ccgatagcgc cggggaagcg
      721 gacgggccgg attcgtccgg ctggatcggg tgaggatgcg ggggcagcca ccaggatcgg
      781 gccacgcccg ccagcccgcg cggcaacagg atgacgaagg agatcaatag ggcgccaacc
      841 gccacgaggt tatacacgac gccgatgcct cgcatgtact cgtagaggga ctcgaagagg
      901 accccggcga tggcgggtcc gtagatcgtg ccgatgccac cgatggttgc catggtgatg
      961 gtgaagatgc tgaccgtcgg gcccagctcg ttcggggtga tcacctggat gtagtgggcg
     1021 tagaagccgc cggcgatgcc ggcaaaaaag gcgcacatca cgtaggcgaa cactttgtag
     1081 accaggatgt tcacccccag ggtattggcc cggatctcgt cggcgcgcac cgaccgcatg
     1141 accagcccga tgcgggaatg attgccgaga tacgccatgg tgccgacgca cacgacggcc
     1201 agggccaacg ccaggtagta gtaggcgggc cgcgagtagg ggatgcccgg aaaggccggg
     1261 aatccgctga gacccaaggt gccgcgagtg acatcctgcc agttggtggc gatgatccgg
     1321 gcgatctcgc cgaacgccag ggtggcgagg gcgaggtaac tccccttgag gcgcagggcc
     1381 ggatagccga ccacggcccc gaacagggcc gaggctccgc cgccacacaa taatcccacc
     1441 cagggggaca ggtcgaggta aaggctgagc aaggccgagg tgtacgcccc caggccgaag
     1501 aaccccgcgt gtccgaacga gagctggccc gcgtagccgt acaggaagtc ccagctcgcg
     1561 gccaggatcg cgtagatcaa acccacggta acgacatgga tcacgtatgg gttcggcgcc
     1621 atggccggaa acgccaacgc caggacggcg acggttgtga tggccaacgc cttgatggcc
     1681 ctgcttcgcg gcaccagcct gtcctccatc tcacccgtca gaagcgggtg acgtttctcc
     1741 ccagcaatcc ggatggacgg agcagcagca ccagcagcat cgacactggc gccaggagat
     1801 cgtggaaccc cccggggagc cacaacaccg ccagcgattc ggcgatgccc agcatgaggg
     1861 cggcgatcag ggcccccggg atgcttccca gcccgccgag gatgacgatc accagcccct
     1921 tgatggtcag gggaagcccc atcgagggca tggcatagat gatgggcacc agcagcgcgc
     1981 cggccacggc ggccaggcca gacccgatgc cgaaggcgat ggcgtggacg cggcgaatgt
     2041 cgatcccgct ggccagggcg gcctgcgggt tgaccgccgt ggcccggatg gccgtgccca
     2101 gccgggtcca ctgcaggaag gccagcagcg cgcccgtcag cacggtgctc gcgaccagcg
     2161 ccagcaggcg ttgatactgg acggtgactt ccccgagctg gagggccccg gagatcaggg
     2221 gcggcacctt gagatagtcg gcgccgaaga cggcgaggat cgcattggac aggaacatcg
     2281 agaggcccag ggagagcacg agccctcggc gctcgtcggt ccgaccctcc cgggtgatgg
     2341 gttggatcag tgtgcgctgg atcagcatcc ccagcacgag gacgatcacc agggcggcac
     2401 cgagggtgcc ggcggcgccg ccgccgccgg tgaccacggc atacacgacg ctacagtacg
     2461 cgcccacggc cagcagatcg ccgtgagcca tgttgatgaa ccgaaggacg ccgaagatca
     2521 gggccaggcc gacgccgatc agggcataca cgcccccggt caggatcccc gcgagggtga
     2581 agttgaccac ggtttccacg ggtttcctgc acctaccgcg gtgatgacgc ggcaggtggc
     2641 ttgatccccg cgcccaggta caggcgggcg agcttgtcgt cggcggtgat ctctgacggc
     2701 gcgcccgcga agcggttccg gcccagctcc agcacgtaga cgaggtcggc gacctggagg
     2761 atcttgcgca cgttctgttc gacgatcaga aaggtcagcc cttctcgtcg caactgttcg
     2821 acctcacggt agacctgatc caccaggagc ggggccaggc cgatggacgg ctcgtccagc
     2881 agcaccagtt ccggcttcat catcaggaag cggccgatct ccagcgtgcg cagctctccc
     2941 ccgctgagca ggcccgcggg ctggtgttgc cgcatccgca aggccgggaa gcgctcatag
     3001 acggcctgca tgcgccggcg cacgaccgag cggtcgcgtt ccaggaaggc gccaacccgg
     3061 aggttctctg ccaccgtgag cgggccaaag ctgcaccggt cctgggagac gtaggcaacg
     3121 ccgcggcgga cgcggtcttc cacccgccag cgcaccagcg actcgccacg caagaagacc
     3181 gcgccgcggt cgagcgtgag aaatcccatg atggtcttga gcagcgtcga cttcccggcc
     3241 ccgttcggtc cgatcaccgc ggtgatgctc ccttggtaca cggtcaggtc gacaccctgg
     3301 agcaccgtcg agcccgcgta gcccgaactg acgcccttca cctcgaggag gatctccggg
     3361 ctcacctcaa ccccctccga ggtaggcttc caacacccgg ggatcccgct gcacgtcctc
     3421 gccgcgaccg tcggcgatct tctgcccgta attgaggacg atgacccggc ggcagttctc
     3481 gaggacgaag gggacgttat gctctaccac gatcagggtc cggccggccg acaggaggtg
     3541 cacgagcagt gcgctcatga cagcggtcaa tgccggggcc acacccgcga ccggctcatc
     3601 cagcaggagc agttccggct ctgacatcag caccacagcc agctccagca gcttctgctg
     3661 gccgtaggac agctcctgag ccggttggtc cccgtaccgg tccagccgga ccagcgccag
     3721 cagctccacg gcgcgcctgg catcgaaggt ccgggccccg gttgcgcgag acatgcccgc
     3781 gaccatgagg ttttccatga cggacagatc ccggaatacc cggacgatct ggaacgtgcg
     3841 gcccaggccc gcccgagcca ccaggtgggg cttcccgcga gcgatgggcg tgcccttgaa
     3901 gcgcacctca ccagcgctgg gcatctccag gccggaaagc aggtcaa
//
LOCUS       DASYRV010000294         2165 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3176432, whole genome shotgun sequence.
ACCESSION   DASYRV010000294 DASYRV010000000
VERSION     DASYRV010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2165
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3176432"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2165
                     /gene="acnA"
                     /locus_tag="VGQ24_07690"
     CDS             <1..>2165
                     /gene="acnA"
                     /locus_tag="VGQ24_07690"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HEV8454756.1"
                     /translation="VPCVVDLVAMRDAMARMGGDPARINPVVPCDLVIDHSVQVDHYG
                     TPQAFRQNVALEFERNAERYQLLKFAQQAFAGFRVVPPGTGIVHQVNLEYLAPVVYEQ
                     SKGGVRTLYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAVMLGQPYFMLIPEVVGLK
                     LTGNLPIGTTATDLVLRVTQLLRKQGVVDKFVEFYGPGLSALGVADRATIANMSPEYG
                     ATVGFFPVDACTIEYLERTGREREAARTERYCREVGLFRTDATPDPDFSDTLSLDLGT
                     LEPSLAGPRRPQDLVPLRELKKNFIVSLPGLMPPTTPAARRTVAEQNYSTWVGEGGAA
                     GTAGAVAAAGPTAAIAEAPAEMPWWQRREDFVLDDGAVVIAAITSCTNTSNPSVMIGA
                     GLLARKAIARGLSTKPWVKTSMAPGSRVVSAYLEAAELQPYFDRLGFNIVGFGCTTCI
                     GNSGPLPEKISTAVEEHQLVVAAVLSGNRNFEARIHPMVRANYLASPMLVVAFALAGC
                     VSVDLLTEPLGTAPDGTPVFLHEIWPTMEEIQSTMAASLKPELFKEKYASVFDGDEEW
                     RALPVPEGDRFSWSASSTYIQEPPFFQNLSPRPGTLADITGARVLASLGDSVTTDHIS
                     PAGSIPKSGPAARYLLEHGVQQVDWNTFGARRGNHEVMLRGTFGNVRIKNRLVPEKEG
                     NWTIHFPSGELLSIYDAAMRYADEGTHLLVLAGKEYGTG"
BASE COUNT          351 a          767 c          693 g          354 t
ORIGIN      
        1 ggtaccctgc gtggtggacc tcgtcgcgat gcgcgacgcg atggcccgga tgggcggcga
       61 tccggcccgc atcaatcccg tggtgccctg cgatctggtg atcgatcact ccgtccaggt
      121 ggaccactac gggacgcccc aggccttccg ccagaatgtg gcgctggaat ttgagcgcaa
      181 tgcggagcgc tatcaactcc tcaagttcgc ccagcaggcc ttcgccggtt tccgggtcgt
      241 gccccccggc accggcatcg tgcaccaggt caacctcgag tacctggccc cggtggtcta
      301 tgagcagagc aaaggcgggg tccgcacgct ctatcccgac acgctggtcg gcaccgactc
      361 ccacaccacc atgatcaacg ggctcggggt gctcggctgg ggcgtcggcg ggatcgaggc
      421 cgaagccgtc atgctggggc agccctattt catgctgatc cctgaggtgg tcggcctgaa
      481 gctcaccggg aacctgccga tcggcaccac cgccaccgat ctcgtcctca gggtgaccca
      541 gctgctccgc aagcagggcg tggtcgacaa gttcgtcgaa ttctacgggc cggggctttc
      601 ggccctcggc gtggcggacc gggccacgat tgccaacatg tcccccgagt acggcgctac
      661 cgtgggattc ttcccggtgg acgcctgcac catcgaatat ctcgaacgca ccggccgcga
      721 gcgggaggcc gcacgcaccg agcgctactg ccgcgaggtc gggctcttcc gcacggacgc
      781 cacgccggat cccgacttca gcgacaccct gagcctggac ctcggcaccc tggagccgag
      841 cctcgctggt ccgcgcaggc cccaggacct ggtgccactc cgcgagctca agaagaactt
      901 catcgtgtcg ctgcccggcc tcatgccacc caccaccccc gccgctcgcc gcaccgtcgc
      961 cgagcagaac tactccacct gggtggggga aggcggcgcg gcgggcaccg cgggcgcggt
     1021 cgctgccgcc gggccgaccg cggcgattgc cgaagcgccg gcggaaatgc cctggtggca
     1081 gcggcgtgag gattttgtgc tggacgacgg cgcggtggtg atcgccgcca tcacgagctg
     1141 caccaatacc tccaatccct cggtgatgat tggagcgggt ctgctcgccc gcaaagcgat
     1201 cgcacgcggc ctctccacga agccctgggt caagaccagc atggcgccgg gctcccgcgt
     1261 cgtctcggcg tatctcgagg cggccgagct gcaaccttac ttcgaccggc tcggcttcaa
     1321 catcgtgggc ttcggctgta ccacctgcat cggcaacagc gggccgcttc ccgaaaagat
     1381 ctctacggcc gtcgaggagc atcagctcgt ggtcgcggcg gtactgtcgg gcaaccggaa
     1441 cttcgaggcg cgcatccatc cgatggtgcg cgccaattac ctcgcttcgc ccatgctggt
     1501 cgtggccttt gccctggccg ggtgcgtcag cgtagatctg ctcaccgagc cgctggggac
     1561 ggcccccgac ggcacgccgg tgttcctcca cgagatctgg cccacgatgg aggagatcca
     1621 gagcaccatg gccgcctcgc tcaagcccga gctcttcaag gagaagtacg cctcggtgtt
     1681 cgatggcgac gaggagtggc gcgccctgcc ggtccccgaa ggggaccgct tctcgtggag
     1741 cgccagctcg acctatatcc aggaaccgcc cttcttccag aacctttcgc ctcgaccggg
     1801 aacgctcgcc gatatcaccg gcgcccgcgt gctcgcctcg ctgggcgact cggtcaccac
     1861 cgatcacatc tcccctgccg gctccatccc caagagcggg cccgccgccc gctatttgct
     1921 ggagcacggg gtccagcagg tggactggaa taccttcggc gcgcgccggg gcaatcacga
     1981 ggtcatgctg cggggcacct tcggaaacgt ccgcatcaag aatcggttgg tgccggagaa
     2041 ggagggcaac tggacgatac acttcccctc cggcgagctc ctctccatct acgacgcggc
     2101 catgcgctat gcggacgagg ggactcacct gctggtcctg gcgggtaagg aatacggcac
     2161 cggca
//
LOCUS       DASYRV010000295         2005 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3798368, whole genome shotgun sequence.
ACCESSION   DASYRV010000295 DASYRV010000000
VERSION     DASYRV010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3798368"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..277)
                     /locus_tag="VGQ24_07695"
     CDS             complement(<1..277)
                     /locus_tag="VGQ24_07695"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEV8454757.1"
                     /translation="MQGLMMRWPLVLTHFLERARRLHPARPIASRHAGGVFRYTFGDW
                     AARIDRLAGALTALGIRRGDRVATFGWNSHRHYEAYFAIPCMGAVLHT"
     gene            424..1074
                     /locus_tag="VGQ24_07700"
     CDS             424..1074
                     /locus_tag="VGQ24_07700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454758.1"
                     /translation="MITADARSRITAHDVELLAGCLGMEPARLTSLDALLDRREVAGF
                     LLSATLPGPSPSLLFYVLVRHSLLEVGIEDKSVADYFAAVLREFGIRNRSTRVEDVDD
                     QDHHYLVDILADLSSARGARQFKVSIHLGNYALWLSGIFPERIAAQRLRRGGPDVTYY
                     ESLGGRGYAEASEHRLAEQSGLEEVLRTAAERVHEVRVALNQVSSQLSLRGSRLAA"
     gene            1130..1915
                     /locus_tag="VGQ24_07705"
     CDS             1130..1915
                     /locus_tag="VGQ24_07705"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEV8454759.1"
                     /translation="MTSLAGRRALVCGSTQGIGRASAEALAAAGAEVVLLARSAEQLR
                     SVCAALPVSSGVTHGFLVADFAEPETVREAVTEYLAAHSPLHILINNTGGPPPGAALE
                     ASLDAFRAAFAMHLLCNHVLVQALVPGMRAAGYGRIINIVSTSVREPIKGLGVSNTVR
                     AATAGWAKTLSKELSPFGITVNNILPGSTRTGRLATLLAGRAKTAATSIDAIEASMTG
                     EIPIGRFAEPEEIAAAVAFLASPAASYINGVSLPVDGGRMASI"
BASE COUNT          342 a          660 c          661 g          342 t
ORIGIN      
        1 tggtgtggag caccgcgccc atgcagggaa tcgcaaaata ggcttcgtaa tgccggtgag
       61 aattccagcc gaacgtggcg acgcgatctc ctcgccgaat gccgagtgcg gtgagggccc
      121 cggcaagccg gtctattcgg gccgcccagt cgccgaaggt atagcggaac actccgcccg
      181 catgacggct cgcgatggga cgagcaggat ggagccggcg ggcccgttcg agaaaatggg
      241 tcagcaccag cggccaccgc atcatgagac cctgcatgac tggcagactc ctccaaggag
      301 tgctaagggc gacgtgtaag tggaaagcta ccaatacgtc tggaagatgg gagccccaag
      361 ggccggttgc ggtacggcgt ttgcaccgct cggccctgat tcgtatcgag gaggcggcaa
      421 caggtgatca ctgccgacgc gagaagtcgc atcaccgccc acgatgtgga actgctggcc
      481 gggtgcctgg gcatggaacc ggcgcggctg accagcttgg acgccctgct ggaccggcgg
      541 gaagtggcgg gctttctcct cagcgccacg ctccccgggc catcgccttc cctgctcttc
      601 tacgtgctgg tgcgccattc cctcctcgag gtcggtatcg aagacaagag tgtcgccgac
      661 tacttcgccg ccgtgctgcg ggaattcggg atccgcaatc ggtcgacccg agtcgaggac
      721 gtggacgatc aggatcatca ctacctagtc gacatcctgg ccgacctgtc ctcagccagg
      781 ggcgccagac aattcaaagt gtccattcat ctgggcaact atgccctctg gctctcgggc
      841 atcttcccgg agcgtattgc ggcccagcgg ctccgccggg gcggtcccga tgtgacgtat
      901 tacgagagcc tcggcggacg cgggtacgcg gaggcatcgg agcaccgact cgcggagcaa
      961 agcggcctgg aagaggtgct gcgtaccgcc gcagagcgtg tccatgaggt gcgcgtcgcc
     1021 ttgaatcagg tcagctccca gctttccctg cgcgggtccc gcctcgccgc ctgacccgat
     1081 ctgacaggcc actcccgccc cattaacggc gggggtagct tgctccgaca tgacctcgct
     1141 tgcagggcgc cgcgccctcg tctgtggcag cacccagggg atcggccgcg ccagcgccga
     1201 agcgctggcg gccgccggcg ccgaggtggt gttgctggct cgcagtgccg agcagctccg
     1261 cagcgtgtgc gccgcccttc cggtgagctc tggcgtcacc catggtttcc tggtggcgga
     1321 cttcgccgag cccgaaacgg tgcgcgaggc ggtgacggaa tatctcgcgg ctcactcgcc
     1381 ccttcacatc ctgatcaaca acacgggtgg tcctccccca ggcgccgccc tcgaggccag
     1441 cctggacgcg ttccgcgccg cgtttgcgat gcatctgctc tgcaatcacg tgctcgtgca
     1501 agcgctggtg ccggggatgc gcgcggccgg ctacgggcga atcatcaaca ttgtgtcgac
     1561 ctcggtgcgc gagccgatca agggtttggg agtctccaac accgtgcgtg cggcgacggc
     1621 cggctgggcc aagacactct ccaaggagct cagtcccttc ggcatcacgg tcaacaacat
     1681 tctgcccggc tccacccgca ccggacgcct cgccacgctt ctcgcgggcc gggccaagac
     1741 cgccgccacc agcattgacg cgatcgaagc gtcgatgacg ggagagatcc ccatcggccg
     1801 ctttgcggaa ccggaagaga ttgccgctgc ggtggcgttt ctcgcgtccc ccgcggcgag
     1861 ttatatcaac ggcgtgagtc tgccggtgga tggcggcaga atggcgtcga tctaagcagt
     1921 gattacgctg ctgaactacg ttgccggagc gctggtcccc gcgagcgccg ggaagtatat
     1981 cgaagacttc gagccggcca gcggg
//
LOCUS       DASYRV010000296         2765 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1930280, whole genome shotgun sequence.
ACCESSION   DASYRV010000296 DASYRV010000000
VERSION     DASYRV010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2765
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1930280"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            80..1303
                     /locus_tag="VGQ24_07710"
     CDS             80..1303
                     /locus_tag="VGQ24_07710"
                     /inference="COORDINATES: protein motif:HMM:NF027964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HEV8454760.1"
                     /translation="MTRFRYVVLGSGRQGTAAGLDLALRGDAREIVLADASEERAAQA
                     ARWIASRLTGPAGKVALTPEPVDCNDSGAVLALLPGANAAISALPYRYNLAITRSAIE
                     AGCNLCDLGGHPETTNAQLQLSDAARRAGVSVVPDCGQAPGMATSLMALALGMVPSPE
                     NLEVWDGGLPLDPAPPLFYRLTFAVQGLTNEYDGPCYNLRDGEVVVLESLSEAQTVDF
                     PPPLGRLEAFCASGTGSTFPWTHRGKLARFTSRIVRYPGHLAAIRTLKALGFFSQTPI
                     TVDGHAVAPRRLTETLLEPLLVGDTPIEDVVVIRVHCTGRANGRTVRAEVDVLVYHDP
                     EVGLTAMQRCTGFDAAIVAAMMARREIAPGVAVRELSVDPERYVSELARRGMPVTRRL
                     TELSADPARTQPHRG"
     gene            complement(1254..>2765)
                     /locus_tag="VGQ24_07715"
     CDS             complement(1254..>2765)
                     /locus_tag="VGQ24_07715"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEV8454761.1"
                     /translation="DVPAAIRREKQIKDLRPFASLRVTTSMTTVPETAPVTAPRVELP
                     RVLTLRDLVLFNIVAVLSLRWTATAAAAGPSSLTMWVLAALLFFIPQGLAVSHLAARY
                     PQEGGIYFWTKRAFGEGHGFLCGWCYWVNNILYYPNLLMSTAVIATYAIGRSQTGLMD
                     DWTYIFAATLTSLWLAVLLNIVGLKTGRWLQNLGALGTYLPGLVLIGFGFHAALTRGS
                     ATPITLDTITPDLSDMSALNLWASIAFAYAGLELCAVMGDEIKNPRRTLPRSIYIAAP
                     LIAFLYIAGTASVLWLVPSSEVHVVSGFFQAMAAGARDLGGLGWIIPLAAALYVLGNI
                     GGIGAWLTGPARVAFVIGLDRYFPPAFGRVHPRWKTPYVAILTQAVLATVFLMLSVLG
                     KGTTVEKAYLILLDTMLLIYFIPYIYLFICYLVVRSKETGAEAQAWYGGRIAGWIIGF
                     AGLLLTLGAMTVATIPPTDTAEPWIFRLKVIGGAGLFVILGGVVFWRGRRTAR"
BASE COUNT          525 a          897 c          899 g          444 t
ORIGIN      
        1 acggactcgc caccatgtgc gtaggcgtcg gccagggtat cgccatggtg atcgaggcga
       61 ggcgttcgct gagatcacca tgactcgatt tcgctacgtc gtgctcggca gcggacgcca
      121 aggcactgcg gccggtctgg atctggcgct gagaggcgac gcccgcgaga tcgtgctcgc
      181 tgatgcctcg gaggagcgtg cggcgcaggc tgcccgatgg atcgcgagca ggctgaccgg
      241 ccctgccggc aaagtcgctc tcacgcccga accggttgac tgcaacgaca gcggcgccgt
      301 gctggccctg ctcccgggcg caaacgcggc gatcagcgcc ttgccgtatc gctataacct
      361 cgccatcact cgctccgcca tcgaggccgg ttgcaatctt tgcgatctcg gggggcaccc
      421 ggagaccacg aacgcccagc tccagctcag cgacgcggcc cggcgagcgg gggtctctgt
      481 agtacctgat tgcggtcagg ctccaggcat ggccacctct ctcatggcac tcgcactcgg
      541 catggtgccg agtccggaga atctcgaggt gtgggatggc ggcttgccgc tcgatccagc
      601 tccaccgctc ttctaccggc tcacctttgc cgtacagggg ctgaccaatg agtatgacgg
      661 gccttgctac aatctgcgcg acggggaagt ggtggtgctg gagagcctct ccgaagcaca
      721 gacggtggac tttcccccgc cgctcggccg gctggaagcc ttctgcgcgt ccggcaccgg
      781 ctctacgttc ccctggactc atcgtggcaa gctagcgcgc ttcaccagcc ggatcgtgcg
      841 ctacccaggt cacctggcgg ccattcgcac actcaaggcg ctgggctttt tctcccagac
      901 gccgattacc gtagacgggc acgctgtcgc gccccggcgc cttaccgaaa cgctgctcga
      961 gcccctgttg gtcggagata ccccgatcga ggatgtagtg gtcattcggg tccactgcac
     1021 cgggcgcgcc aacggccgga ccgttcgcgc cgaggtggat gtgctcgtct accacgaccc
     1081 cgaggtcggt cttaccgcca tgcagcgctg caccggcttc gatgcggcca tcgtggccgc
     1141 catgatggcc cgacgcgaga tcgccccggg cgtcgcggtc cgcgagcttt cggtggatcc
     1201 ggagcggtat gtatccgagc tggcccgccg gggaatgccg gtgacccgac gcctcaccga
     1261 gctgtccgcc gaccccgcca gaacacaacc ccaccgagga tgacgaacaa cccagcaccg
     1321 ccgatgacct tgagccggaa gatccagggc tcggcggtgt cggtcggcgg gatggtcgcg
     1381 acggtcatcg cgcctaacgt cagcaggagg ccggcgaatc cgatgatcca cccggcgatc
     1441 ctcccgccgt accacgcttg tgcctcggcc ccggtctcct tcgaccgcac gaccaaatag
     1501 cagatgaaga ggtagatgta cgggatgaag tagatcagca gcatcgtgtc gagcaggatc
     1561 aaatacgcct tctcgaccgt ggtccccttc cccaataccg acagcatgag aaagaccgtg
     1621 gcgagcacgg cctgggtcag gatcgcgacg tagggggtct tccaccgggg gtggacccgt
     1681 ccgaaagcag gaggaaagta ccgatccagc ccgatcacga acgccacccg cgcgggaccg
     1741 gtgagccagg ccccgatgcc gccgatgttg cccagcacgt aaagcgcagc cgccaacgga
     1801 atgatccaac cgagcccacc gaggtcccgg gcgccggcgg ccatggcctg aaagaagccc
     1861 gagacgacat ggacctcgga gctgggtacc agccagagga ccgatgcggt gccggcaatg
     1921 taaaggaacg caatgagcgg agcggcaatg tatatcgagc gcggcagggt tcggcgcggg
     1981 ttcttgatct cgtctcccat gaccgcacag agctcgaggc cggcataagc gaacgcgatc
     2041 gatgcccaca ggttcagcgc cgacatgtcg ctgagatccg gcgtgatggt atccagcgtg
     2101 atcggtgtgg ccgaaccacg ggtaagcgca gcgtggaaac cgaatccgat cagcaccagg
     2161 cccggaaggt aggtacccag cgcccccagg ttttgcagcc accgtcccgt cttgagaccg
     2221 acgatgttca gcagcacggc cagccagagc gaggtcagcg tggcggcgaa gatgtaggtc
     2281 caatcatcca tcaggccggt ctggctgcgc ccaatcgcgt aggtggcgat cacggcggtc
     2341 gacatgagga gattggggta atagagaatg ttgttgaccc agtaacacca gccgcagaga
     2401 aatccgtggc cctccccgaa ggcacgcttg gtccagaaat agattccgcc ctcctggggg
     2461 taccgggcgg ccaggtgact gacggcgagc ccctgcggga tgaagaagag cagcgccgcc
     2521 agcacccaca tcgtgaggga gctcggaccg gcggcggcgg cagtggccgt ccacctgagg
     2581 ctcaagaccg ccacaatatt gaacagcacc aggtcccgca gagtgaggac acgcggtagc
     2641 tcgactcgtg gcgctgttac cggggcagtt tcggggacgg tagtcataga agttgtcacc
     2701 ctgagcgaag cgaagggacg aagatcctta atctgctttt ctcggcgaat ggccgccggt
     2761 acgtc
//
LOCUS       DASYRV010000297         2606 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1568988, whole genome shotgun sequence.
ACCESSION   DASYRV010000297 DASYRV010000000
VERSION     DASYRV010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2606
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1568988"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1004
                     /locus_tag="VGQ24_07720"
     CDS             <1..1004
                     /locus_tag="VGQ24_07720"
                     /inference="COORDINATES: protein motif:HMM:TIGR00765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEV8454762.1"
                     /translation="SVTYLPTVSLHVPRGSNLRGTTMAKTRPGVTGLINETAKDFLSD
                     DCMDSAAALSYYTIFSLPAILVLMLTLISAVLNPSDVRGGIEGQLQALMGPSAGEQIR
                     TIIQQAEQKPHNGLIPTILGIAGLLFGATGAFGQLQKALNRAWNVEPDPNQGGLKNFL
                     SKRVFSLGMILVVAFFLLVSLVISAALTGMGDRLGGFLPSGLSAPLLEALNMVISLAV
                     ITLLFAALFKVMPDAKIAWRSVWVGAAVTAFLFVIGKFLIGFYLGQSNPGQAYGAAGS
                     LAVLLLWVYYSALILLFGAEFTETWAERRGRGIEPEPGAVRVRREKQRVGEVGPTTG"
     gene            complement(1016..2098)
                     /locus_tag="VGQ24_07725"
     CDS             complement(1016..2098)
                     /locus_tag="VGQ24_07725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454763.1"
                     /translation="MTRLILAFAALGTLSACSGSPERSASVVNQADRPLLVAPPDTSS
                     KVAGDISSRGDQPVSPVEQQVPRVGPTAKARPASRPHKRAAVRPKPPVDTASSRGYAP
                     TNTDAVTSADTSVVRDTGSAPPRDTARATTPDTTTSVPAADTLATARADTLLVDTMGP
                     SPDSAVASSATNSGPASDASSIDDASRRTLPIGTEIHAALDDSISSRRDSAGRSITAE
                     ISQSVTSAGGKVLVPAGSTVRLTVTKLASAKSKSSQGILALRVDGIQVRGQFENVQAD
                     VRPVPRELRGRGVTSADAAKVGVGAVGGAVLGRVLGGNTRGAVIGGVAGAAGGAVVAS
                     QTATRDVVVKAKTPVTFVLTAPLVTP"
     gene            complement(2232..>2606)
                     /locus_tag="VGQ24_07730"
     CDS             complement(2232..>2606)
                     /locus_tag="VGQ24_07730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454764.1"
                     /translation="AGLVLNVIDYLVYGVWLAPDMAAAMQAAGRPPIDNLIPLFVVLD
                     FLYGIALVQLYAAIRPRFGAGPGTAVKAGIYVWVLTGLLHAIGEAPMGLLPQRLYTIG
                     TLVALVSFPLAAVAGARFYREP"
BASE COUNT          429 a          851 c          861 g          465 t
ORIGIN      
        1 ccagcgtcac ctacctgccg accgtatccc tccatgttcc ccgaggctca aatctccggg
       61 gtacgacgat ggccaagaca cgaccgggcg tgaccggtct catcaacgag accgcgaagg
      121 attttctaag cgacgactgt atggattcgg cggcagcgct ctcctactac acgatcttct
      181 cgcttccggc gattctggtg ctgatgctga cgctcatcag cgccgtcttg aatccatcgg
      241 atgtgagagg cggcatcgag gggcagctgc aggctctgat gggaccgagc gctggcgagc
      301 agatccgcac catcattcaa caggccgaac agaagcctca caatgggctg atccctacca
      361 ttctgggcat tgcgggcctt ctcttcggcg cgaccggcgc gttcgggcag ctccagaagg
      421 cgctcaaccg tgcctggaat gtcgagccgg acccaaacca gggtgggttg aagaatttcc
      481 tcagcaaacg ggtcttctct ctggggatga tcctcgttgt cgcgttcttc ctgctggtgt
      541 cgctggtgat cagcgcggcg ctcaccggga tgggcgacag gctgggtggc ttcctgccgt
      601 cggggctctc cgctccactc ctcgaggcgc tgaatatggt gatatcgctc gccgtgatca
      661 cgctcctctt tgccgcgctg ttcaaggtga tgcccgacgc caagatcgcc tggcgcagcg
      721 tctgggtcgg cgcggcagtc acggcattcc tgtttgtgat tgggaaattc ctgatcgggt
      781 tttatctagg gcagagcaac ccgggtcagg cgtacggcgc cgcggggtcg ctcgcggtgc
      841 tcctgctctg ggtctactac tcggcgctga ttctcctgtt cggcgcagag ttcaccgaga
      901 cctgggcgga gcggcggggt cgaggcatcg agccggagcc gggcgcggtg cgggtccggc
      961 gggagaagca gcgcgtcggc gaggtcggcc cgacgaccgg ttgaggtgtg tcgccttagg
     1021 gcgtgaccag cggcgcggtg agcacgaagg tcaccggtgt cttggccttc accaccacgt
     1081 cgcgggtcgc cgtctgcgac gccaccaccg caccccccgc ggcgccggcg acacccccga
     1141 tcacagcccc cctggtattt cctccgagca cacggcccag caccgctccg cccacggccc
     1201 ccacaccgac cttggcggca tcggccgagg tgacgccgcg cccacgcagc tcgcgcggca
     1261 ccggccgcac gtctgcctgc acgttctcaa actgtccgcg gacctggatt ccgtccaccc
     1321 tgagcgcgag gatgccttgc gagctcttgg atttggcgga ggcgagcttt gttacggtaa
     1381 gccggacagt gctgccggcg gggaccagga ccttgccgcc cgcactcgtc acgctctggc
     1441 tgatctcagc ggtgatgctg cgtccggccg aatcgcggcg ggagctgatc gagtcgtcca
     1501 gcgccgcatg gatctcggtg ccgatgggga gagttcgccg cgatgcatca tcgatgctcg
     1561 acgcatccga ggccggccca ctgttggtcg cgctcgatgc gacggcgcta tcgggtgagg
     1621 gccccatggt atcaaccagg agcgtatccg cccgtgcggt cgccagggta tccgccgccg
     1681 gaaccgatgt cgttgtgtcg ggcgtggtgg ctcttgcggt atcgcgtggc ggagccgagc
     1741 cggtgtcgcg gacgaccgac gtgtccgcag acgtgacggc gtcggtattc gtcggcgcgt
     1801 atccgcggga cgaggccgtg tccaccggcg gcttcggccg gacggcagca cgcttgtgcg
     1861 gacgtgaggc tggacgagcc ttcgccgtcg gcccgacgcg ggggacctgc tgttccaccg
     1921 gagacaccgg ctggtcgcca cgcgaggaga tatcgccggc caccttgctc gacgtatcgg
     1981 gcggcgccac cagaaggggc cgatccgcct ggttcacgac cgaagcgctc cgctcggggc
     2041 tgccggagca ggcagacaga gtccccaggg cagcgaaggc aagaatgagc cgcgtcatag
     2101 gtcctcctga gtctaggcga ttctactcag gattttcggc cttcggcgcg tgaggttctg
     2161 tggggtggct cacagatcgc gcgttcaccc cttcctcccg agtcctcgcc gcgctcaggg
     2221 tgggtcgccc cttacggctc gcggtagaac ctggctccag ccacggcggc gagcggaaac
     2281 gaaaccagcg caaccagagt gccaatggtg tagagccgct gcggtaacaa ccccatcggg
     2341 gcctcgccga ttgcatgcag caaaccggtt aggacccaca catatatgcc tgctttcact
     2401 gcagtaccgg gcccggcgcc gaaccgggga cggatggccg cgtagagttg aacgagcgcg
     2461 atgccgtaga ggaaatccaa gacgacaaag aggggaatca ggttatcgat cggtggtctt
     2521 ccagccgcct gcatcgctgc agccatatcc ggcgccagcc acacaccgta caccagataa
     2581 tcaatgacgt tcagcaccaa gccagc
//
LOCUS       DASYRV010000298        17629 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_952536, whole genome shotgun sequence.
ACCESSION   DASYRV010000298 DASYRV010000000
VERSION     DASYRV010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 17629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17629
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_952536"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..205)
                     /locus_tag="VGQ24_07735"
     CDS             complement(<1..205)
                     /locus_tag="VGQ24_07735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454765.1"
                     /translation="MPCGGNHGWFHPCYLYRRLLFGDLARVAARSVTAAVSATTGESD
                     LNLGIVACFQTHGSLADFYLHLHL"
     gene            365..1366
                     /locus_tag="VGQ24_07740"
     CDS             365..1366
                     /locus_tag="VGQ24_07740"
                     /inference="COORDINATES: protein motif:HMM:NF012981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEV8454766.1"
                     /translation="MATLGLIVNSAARRVKHRYLAPHPFWRGLLPDESVRVTRSLEEL
                     EEAVVEFRERGIQVVAALGGDGTLHRMIDVLIRHQDEADLPMVLALAGGTMNGLPRAL
                     GTGGAPERALSTALDALHGGALPVTRRHVLRILDRNEGCTRHGFGFATGLAYRAFEEY
                     YRSPEPGMADALRASLLPLKAALFHQPFFDGARLGVEADGAPWLPEAPHTLVASVVDN
                     PVLWFKPFGAPLGDARAFHLVATSMRPGEMAVRLWSIFRGRCRHPKLRAGQSREVTAR
                     GGSGYLIDGDRYPAGGGIDVRLTVGPTLRFVGPLRDHPGAVASRHPRLRIGDGRDDV"
     gene            1347..2426
                     /locus_tag="VGQ24_07745"
     CDS             1347..2426
                     /locus_tag="VGQ24_07745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454767.1"
                     /translation="MAVTMYSRRGLVPVLLHALAALAGGGPLSAQDPFASIDHLPQAR
                     SRVDERRGTLTIDLPTLAVAAGELLGTPLFRASIPFEMSLHAFAVQVADDQGRIMPRD
                     RLHHIVMTDPSRRQIFAPLALPIFGASKESPTPSLPRYLFGLPLPASNRYLVSAMFQN
                     PETRPVKLHVRLVFSFIRPGRLFPLVRVYPWLMDVTFPLGTGEGRHAFDLPPGHSSRS
                     WAGSPRIAGTVIAIGGHAHDFVTAIRMVDVTTGDTVYNPRPSRDAGGRLLAIPVARFY
                     RFYRLGIRIDPSHIYRLTVEYDNPTGATIPFGGMGSVMGLVAPSRRAPWPRVDTKDSI
                     YRTQIRDLLDNPGARAMGHASHSMP"
     gene            2436..3023
                     /locus_tag="VGQ24_07750"
     CDS             2436..3023
                     /locus_tag="VGQ24_07750"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEV8454768.1"
                     /translation="MTTRNAPHESPLTWANLVTCLRVTGSITCFTVAALGGGTPWNLA
                     GLLIYWALDSIDGFLARALHQETRMGAQMDIIADRLLITFFYYNALSRNPHLLLAAGL
                     FLFQYAGPDLYLSIQFLRWPILSPNYFHRVDRRIWALNWSPVAKFSNAGLATGLIVLL
                     GNAWLPILVCSALLVMKIYSCVLLQRVPAPEQSWV"
     gene            3014..4759
                     /locus_tag="VGQ24_07755"
     CDS             3014..4759
                     /locus_tag="VGQ24_07755"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acyl-AMP ligase"
                     /protein_id="HEV8454769.1"
                     /translation="MGVSGLAPIRPVVPEFATLVDTLRFRAERQPDRVGYRFLLDGET
                     REASLTYGELCCRAEAIAALLATLQRTGDRALLVYPPGLDFICAWFGCLAAGSVAVVV
                     QPPHQARLPQFLSRVASVCRDAAPTVALTTSAIRELLAEAADLAPEPSAMRWRTTEAE
                     LAAPPPGWNLPRPTVADLAFLQYTSGSTTEPRGVMVSHDNLIQNLRLIRESFAQSTET
                     PSVSWLPPYHDMGLIGGILAPLYVGFPVTLMPPAGFLQRPYRWLRAISRVRATVSGGP
                     NFAYDLCLQRITLEQRAGLDLSSWRVAFNGAEPLNPRTMQEFSEYFEPCGFSPNAFKP
                     CYGLAESTLLVAAAANYTPPVVRSFRESGLTEGRVIPCPEHDPAARALVASGRTVATT
                     LIVDPDAMAECPPGRIGEIWVQGPSVANGYLNRPSETSFTFGARLATGAGPFLRTGDL
                     GFLLEGELFVTGRLKDLIIIGGHNHYPQDIERSVGEAHPALGGGGCAAFSIEVEGREE
                     LIVVAEATGRSGPPPAELRRAIRTAVSVHHGLGVRDILLIRRGGIPRTTSGKIRRGAC
                     RAAYLARTLDAWGQP"
     gene            4768..6075
                     /locus_tag="VGQ24_07760"
     CDS             4768..6075
                     /locus_tag="VGQ24_07760"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEV8454770.1"
                     /translation="MFISLQHPRPWSENDERRLLDDALRQVELGDRLGVDYVWAQEHH
                     FLEEYSHSSAPEVFLAACSQRTSRIRLGHGIAVMSPYFNAAARVAERIATLDLISGGR
                     VEWGTGESGSRMELEGFGVSFVDKRPMWAEAVRECARMQCLDPYPGYQGKYFSMPARN
                     VVPKPLQKPHPPLWAACSNRDSLKLAARLGMGALTFAFTDAREASFWVEEYYETFRSE
                     CTPIGLAVNPNVAMLTGFMCHEDEAVARSRGDAGAQFFAFSLGHYWRDGIHVPGRTDL
                     WKEFIQRPDDHAEAVSRERMKAGMEGIGSPAQLIDNFRAYEEAGVDQLILLHQCGGYR
                     QEHVSASLELFANRVLPEFKQRDGAREEKKRRELAPFIAAALDRIPALDVPAELPGVA
                     AYPRLWAEKGAGTEALAPDRRPGMAALWQLQVGGHDASHGADR"
     gene            6072..14774
                     /locus_tag="VGQ24_07765"
     CDS             6072..14774
                     /locus_tag="VGQ24_07765"
                     /inference="COORDINATES: protein motif:HMM:NF012873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid adenylation domain-containing
                     protein"
                     /protein_id="HEV8454771.1"
                     /translation="MSEAEIRAWLVAEIARTVRLDPSEIDIREPFDAYGLASADAVGL
                     SGTLEQLLGRELSPTLIYDYPSIAALSRHLGGAPAEKSTGSAAGGAGVPSAGPHEPIA
                     IVGMGCRFPGAENPEAFWRLLKDGADMIREVPPDRWEVGAFFDPDAAVPGKAISRWGG
                     FLDQVDRFDPFFFGISPGEAEGMDPQQRLLLEVAYEAFEDAGYSMRRLAGSHTAVFVG
                     ISVNEYGFLQVGRHELINGHSGTGAALSVAANRISYSLDLHGPSVAVDTACSSSLTAV
                     HLACQSLRSGESELALAGGVNVVLSPEHSIAFTKAGVLAPDGRCKPFDAGANGYVRGE
                     GCGLVVLKPLARALADSDPVYAVIRGGAVRQDGRTNGLMAPNREAQEAVLRAAYEDAG
                     VAPGRVQYVEAHGTGTLLGDAIEAQALGAVLSSGRADGPCALGSVKSNFGHLEAAAGI
                     AGLIKTALSLKHRTLTPTLHFTRPNPHIRFDRLNLRVQQTVAAWPQHDGTAIAGVSSF
                     GFGGTNAHLVLEEAPMADGTAEAGPLPAQLLPLSGHNDDALREVAVRFRDRVTREPSN
                     AGVSLGDLCASAGIRRNHLSRRVAVIARSNAELAERLEDFLRGTDHPDTIVGGNTVPE
                     DSRLVLVFSGQGSQWPGMGRRLAVEEPAFGAALERCDAALRPHLTWSVQEELAAVGES
                     ARLDDIEVVQPVLFALQVALAALWRSFGVEPDAVVGHSMGEVAAAHVAGALSLEDAAR
                     IITARSRLLAQLSGHGGMAVVGLSLPETASFIATVDGGLWIAATNGPSSTVVAGGTAE
                     LTRLIEKLEGQGIFCRLAKVGVAAHGAQAMPLAEELRRCLEGLEPPSATLPFISSVTG
                     GDATGMLLDGDYWARNLTEPVNFAGAVGHLLHSGYRTFIEVSPHPVLQSSIQQGMMQF
                     AYDGLALPSLRSGEDGRTSLLRSLAALHVSGRDIAWRGLSRHRRFVSLPTYPWQRERF
                     WIQAPAKPGRPRTSGSEAGRGQSHPLLGEPVALAHQPGAYLWQPALDAGREALLRDHR
                     VNGEIVVPAAAYLEMALSAAAEAGIADTHLLRDLSFTRAMTLGESQRRTLQVTLFPAE
                     HGSLSFAVYSRPAGEPPGDWTLHAQATFVTADAETDSWSPVSAPPSTLQEQFPEQIPP
                     EELYRSLRSRGLEYGPGMRSIVEIRRSGSGALGRIVLPDSLRAASKHYRIHPALLDGA
                     LQAVAAIGVLPGEPEAADTFVPIGCRSVALRGSGAERLWSRVVLKSGSGTGAGEIECD
                     VELLDESGMILGQLDGFRLARISRSRSPIPPLPRDIWLYGVDWIPVLWPAPQNEEGPA
                     GGARGRWIVVGDDSGLALDLKRQFEARGDNCRIIAPDQPLGGEPSPVRGVIYLASPSG
                     DDPTTQCNGLAGLVRSLTAASAPLSTFRLWVVTQGAQSVRPGDAVSVGLAPLWGLGKT
                     IAFELPVLRCTLVDLDPSLPSLSASELLLRELSCADLEDQVALRGNERLVARLLPQAL
                     EASLPSCHLGGSPLVGPDGTYLITGGLGGLGLTVAQWMIEQGARHLVLVGRNSPSPAV
                     ASALATMRHSGAKVVVLAADVARAVDVTGIFDHIRETMPPLHGVVHAAGVLANRPVTD
                     IDAESLARVMAPKVAGAWNLHLASRGEALDFFVLFSSAVSVLGSPGQGSYAAANSYLD
                     ALAHHRHTEGLPAISINWGPWSEVGLVSGGNFIGSRGNPGDRGVKGIDPESGVLVLGR
                     AMMSRLPQLTVLPFDLRSLLDLYPAAARIPLFAEVGGRETHVARLYARPSLRQDYLAP
                     RTTVERKLAELWRQTLRINRVGVRDSFFELGGDSVLAAQIITSAHRTFGVGIDLREAF
                     QSFTIESLAKRIETAQAAPADGAPLERMAAGPGPLSFVQERQLFLELLDPFTAVNNLA
                     VCLLLEGALEPAMLEGAANRVIARHEVLRTSFDTGHGRPMPRIEPALTMALEVVDLTH
                     HPADRRAEALRLAELDARRPFELDHPPLLRARLFRLAPESHVLVIVVHHTIADGWSLG
                     VLLRELFFRYRALATGTTGELPPLPIQYRDFASWQRDPEQARIFERQLEYWKKQLGGE
                     LPVLDLPVDRPRPTRQTFTGATRRFRISASLGRALKERSSQYDATPFMLLVAAFQALL
                     HRYCRQDDILIGTPIAGRSRPETDQLIGPFINTLVLRTDLSGDPSFRELLNRVRQVAL
                     IAYANEDLPFERLVAELRPQRDLSRTPVFQAMVVFQNSPLPDLSTPGLSIELLPLDRG
                     AAEFDLTMTVSEAREGFEFAFEYNSDLFDRPTIERLGGAFQLLLSEAVARPETRVSAL
                     PVMTETERRHLVVQLNETRAEYPRTECLHQLFEAQAARTPDSVAVICEGVRLSYRELD
                     RRTTALATALQHRGIGPDVTVGVCLPRSPDLLVSLLAVLKAGGAYVPIDPTTPADRIR
                     CIQEDAGAKLLLTRERVEQLLAPPIGPGALRRTSVPTHLAYVIYTSGSTGRPKGVRIS
                     HSSLVNLFWSLGTSLGLGAGDQLLAVTSVSFDIAALELFLPLLVGATVVLATDDMTRD
                     RRRLQEAIEAHGVKVMQATPSLWRLMLQGGWRGAPGLLALSGGEPLTPELAEQLGSRV
                     GSLWNLYGPTETTIWSAAGRVTPGRGPITIGRPIANTQLYILDPQLQPVPTGAIGELH
                     IGGDGVAQGYQNLPELTAEKFIPVPPGLPAPTGARLFKTGDRARYLPDAEIEVLGRFD
                     QQIKLHGFRIEPGDIESALCRHPGVREAAVIPRTGPSGDAHLVAYVVSDRDPAPGRTE
                     LRDFLRSLLPAYLVPSVFVSLPRLPLTTAGKVNRRALPEPPSVTDAPAFAPPGTPLEE
                     LLATIYAQVLGVERIGIHDNFFDLGGGSIQILEIVVRAQSAGLTLAPESFFEHQTVSE
                     LASYCGLRGGTADD"
     gene            14767..16797
                     /locus_tag="VGQ24_07770"
     CDS             14767..16797
                     /locus_tag="VGQ24_07770"
                     /inference="COORDINATES: protein motif:HMM:NF020130.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase III
                     C-terminal domain-containing protein"
                     /protein_id="HEV8454772.1"
                     /translation="MTDGLPDRRTLIESLGVYLPARQVLTEEVLEGCATRPRFPLERL
                     SGIRSRRVAGEGEFGIDLAQQAISRCLAGSKRGPRDVELLISASVGHCDGPGLCISHE
                     PSTSLRLQRRFGFDRAMVFDVASACSGMFTAIAIVDALIRGGAIECGLVVSGEYITHL
                     GTTAQKEIAGPLDPRMACLTLGDAGAAVMLTATTTPGCGFEALDLCTFGAYSRYCVAL
                     PTTEPHGGAIMFTDALKLTEAATRHGAAHAMVTVKRAGWAPASFHSLIMHQTSSTALA
                     SAMREINRVMKGPVCHAGNTIDNLAERGNTASTTHFVALADNLANGRIRSGDRVVFAV
                     SGSGLTVGTGLYAMDDLPDRFGGAVASAPLPSNGSRRRRPRSTPETPLIRIESVGTAA
                     HSPAGTIETLSLLREAAIECLGRSSYDRRDLGLLIYAGVYRSRFLSEPAIAALLAGEL
                     DVNAAMSAEDGRRTLAFDVFNGAVGFLSACYVAAAMIRAGKTVTAMIAASEVENNAGA
                     FPSDLLGIEETGSALILDRARGRAAGFGPFLFKSFTEHEDAYTSQAINRDERPCLRFA
                     RDPDLKRYYLAAITSTVTELLASEGLAISGIARILPPQISADFLTRLGQALNVPPDRL
                     VDAMPGDRDLFSSSLPYAFRWTLDRGLAQPGDVGLIITVGSGVQVGCALYYF"
     gene            16733..>17629
                     /locus_tag="VGQ24_07775"
     CDS             16733..>17629
                     /locus_tag="VGQ24_07775"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEV8454773.1"
                     /translation="MWDSSSRSDRECKLAAPSTTSSPRSGGARPPGPRSRTPLGQLIP
                     LRRDILGFLSMVAREYGDVASFSVGPIGAVLLNHPDHIRDVLLTNHQNFVKGRPLHLA
                     KQLLGEGLLTSEGEFHARQLRIVSPAFHLQRLVSYGPVVTGYAMRQSEGWGEGGSVDM
                     LDEMIRLATAIAGKTMFNWDIDSAAAAGIGKALDDAVSLFSRVSVPFAELLLRLPLPS
                     NRRFFRARAHLDAAIYRLIGERRREGRDRGDLLSMLLLAQDSEGDRGGMTDRQVRDEA
                     LTLFLTAFDTVSLALTWTWYLLA"
BASE COUNT         2671 a         6104 c         5796 g         3058 t
ORIGIN      
        1 ggaggtggag gtggagatag aagtcggcca gggagccgtg ggtctggaaa caggcgacga
       61 tgccgaggtt cagatccgat tccccggtgg tggcgctgac cgcggcggtc acgctgcggg
      121 cggcgacgcg ggccagatcg ccaaacagca ggcggcgata gagataacag gggtggaacc
      181 atccgtggtt ccctccacac ggcatcgcgc cgggtggctg aaaaagccct catgggcccg
      241 ctggccggga ggaatcccgg gagctatcct ctcaaccctt gccatcttcc gcttgacgat
      301 ctcttgagcc ccgtgcggca gtattccatc cgcacgcccg ggctccggtg gaggagacgc
      361 acacgtggcg acgctcggct tgatcgtgaa ctcagcggcc cgcagggtga agcaccgcta
      421 cctcgcgccg cacccctttt ggcgaggcct gctgccggac gagtcggtgc gcgtcacccg
      481 gagcctcgag gagctcgagg aagcggtcgt cgagtttcgg gaaaggggca tccaggtggt
      541 ggccgccctc gggggagacg ggacgctcca tcgcatgatc gacgtcctga ttcgacacca
      601 ggacgaggcg gatctgccga tggtgctcgc gctcgccggt ggaacgatga acggcttgcc
      661 ccgggcgctc ggcaccggcg gcgctccgga gcgggcgctc tccaccgcgc tcgatgccct
      721 ccatggcgga gcgctgccgg tcacccgccg acacgtcctg cgcatcctcg accggaacga
      781 gggatgcacc cggcacggct tcggcttcgc gaccggcctg gcgtaccgcg cgttcgagga
      841 gtactacagg tcgcccgagc cgggcatggc cgacgcactc cgtgcctcgc tgctcccgct
      901 caaggccgcc ctcttccacc agcccttctt cgacggtgcg cgcctcggtg ttgaggccga
      961 cggcgcgccc tggcttcctg aagcgcccca cacactcgtc gcgagtgtgg tggacaatcc
     1021 ggtcctctgg ttcaaaccct tcggtgcccc gctcggcgac gcgcgggcat ttcatcttgt
     1081 cgctacttcg atgcgacccg gcgaaatggc ggtccggctt tggtctatct tccgcggccg
     1141 ctgccgccat ccgaaactca gggccggtca gagccgcgag gtcacggcac ggggaggatc
     1201 cgggtacctc atcgacggcg accgttatcc cgccggcggt ggcatagacg ttcggctgac
     1261 ggtcggaccg acgctacggt tcgtcggtcc cttgcgggat caccctggcg ctgtagcttc
     1321 tcgccacccc cgcctccgca ttggcgatgg ccgtgacgat gtatagccgg cgcgggttgg
     1381 tcccggtact cctgcatgcc cttgcggcgc tcgccggagg aggcccgctc tcggcccagg
     1441 atccgttcgc ctcgatcgac caccttcctc aggcgcggag ccgggtggac gagcgccgcg
     1501 gcaccctgac gatcgatctc cctaccctcg cggtcgccgc gggagaattg ctcgggacgc
     1561 cgctcttccg cgcctccatc cccttcgaga tgtcgctcca tgcctttgcc gtccaggtgg
     1621 cggacgacca gggtcgcatc atgccgaggg atcggctcca tcacatcgtc atgactgatc
     1681 ccagccgccg gcagatcttc gctccgcttg ccctgcccat tttcggagcc agcaaggaat
     1741 cacccactcc gtcattgccc agatatctct tcgggctgcc gctgcccgcg agcaaccgct
     1801 acctcgtctc ggccatgttc cagaatcccg agacccggcc ggtgaagctg cacgtgcggc
     1861 tggtgttctc gttcattcgt cccgggcggc tgttccccct ggtccgagtg tacccctggc
     1921 tgatggacgt gacgtttccg ctcggcaccg gggaaggccg gcacgctttc gacctgcctc
     1981 cgggacactc ctcccgcagc tgggctggat cgccccgaat cgccgggacc gtgatcgcga
     2041 ttggcggcca tgcccatgat tttgtcacgg cgatccggat ggtcgacgtc accaccggcg
     2101 acacggtcta taacccgagg ccatcccgtg atgccggggg gcggctgctc gcgatccccg
     2161 tggcgcggtt ctaccggttt tatcgcctcg ggatccgcat cgacccttcc cacatttatc
     2221 ggcttacggt ggagtacgac aatcccaccg gcgcaactat tccatttggc ggcatgggat
     2281 cggtcatggg tctcgtcgct ccgtcgcggc gggcaccgtg gccccgggtt gacacgaagg
     2341 attcgatcta ccgcacgcag atccgcgacc tcctcgacaa cccgggcgcg agggcgatgg
     2401 gccacgcgtc ccattccatg ccctgaggag cggcgatgac gacgcgcaac gctccgcacg
     2461 aatcgccgct cacttgggcg aatctggtca cctgcctgcg ggtcaccgga agcatcacct
     2521 gcttcacggt cgcggcgctg ggaggcggca ctccgtggaa tctggccggg ctgttgatct
     2581 actgggccct ggattccatc gatggatttc tggcccgcgc cctccaccag gagactcgga
     2641 tgggggcaca gatggacatc atcgccgacc ggctcctgat caccttcttc tactacaatg
     2701 ccctctcccg gaatccccac ctgttgctcg cggccgggct ctttctgttc cagtacgccg
     2761 gacccgacct ctacctctcg attcagtttc tccgctggcc gattctctcg cccaactatt
     2821 tccaccgggt cgaccgtcgg atctgggcgc tcaactggtc tccggtggcc aaatttagca
     2881 atgcgggcct cgcaaccgga ctaatcgtgc tgctggggaa tgcatggctg ccgatcctgg
     2941 tgtgctcggc actgctcgtc atgaagatct attcgtgcgt cctcctgcaa cgggtccccg
     3001 cgccggaaca atcatgggtg tgagcggact ggcacccatt cggcccgtcg tgccggagtt
     3061 cgcgacgctg gtggacacgc tccgcttccg ggccgagcgc cagccggacc gggtcggtta
     3121 ccggtttctg cttgacgggg aaacgcggga agcttcgctc acctatggcg agctctgctg
     3181 ccgggcggaa gcaattgccg ccctgctcgc caccctccag cgaacaggtg accgcgcact
     3241 gctggtgtac cctcccggcc tcgatttcat ttgcgcctgg ttcggttgcc tcgccgccgg
     3301 gagtgtcgcc gtcgtcgtcc agcctcctca ccaggctcgt ctgccgcagt tcctctccag
     3361 ggttgcctct gtctgccggg atgccgctcc cactgtcgcc cttactactt ccgccatccg
     3421 cgaactcctg gcggaggccg cggacctggc gccggagccg tccgccatgc gatggaggac
     3481 gaccgaggcg gagcttgcag cgccgccccc gggatggaac ctccctcggc ccaccgtcgc
     3541 tgacctcgcg ttcctgcaat acacctcggg ctcgacgacc gaaccgaggg gcgtgatggt
     3601 aagccacgac aacctgattc agaacctccg tttgatccgg gaatcgttcg cccaatccac
     3661 tgagaccccg agtgtgagct ggttaccccc gtaccacgac atggggctca ttggaggcat
     3721 cctggctccc ctctatgtcg gattccccgt caccctcatg ccgcccgccg gattccttca
     3781 gcgtccttat cgctggctgc gtgcgatctc gcgggtgagg gcgacggtta gcggggggcc
     3841 gaacttcgcc tacgatctgt gcctccagag gatcaccctc gagcagcggg ccgggctcga
     3901 cctgagcagc tggcgcgtgg ctttcaacgg agccgaaccg ctcaatcctc gaaccatgca
     3961 ggagttttct gagtatttcg aaccttgcgg gttcagcccc aacgccttca agccgtgcta
     4021 cggcctcgcc gaatcgaccc tcctggtggc ggccgctgcc aactacaccc caccggtggt
     4081 ccggagcttt cgtgagtccg gcttgaccga gggccgcgtg attccctgcc ctgagcacga
     4141 tccggcggcg cgcgccctgg tcgcctcggg gcggacggtc gcgaccaccc tcatcgtcga
     4201 tcccgacgcc atggcggagt gcccgcccgg ccggatcggg gagatctggg tgcagggacc
     4261 gagcgtggcg aacggttacc tgaaccggcc ctcggagacg tccttcacct ttggggcccg
     4321 attggccaca ggcgccggac ccttcctcag gaccggtgac ctcggcttcc tgctcgaggg
     4381 cgagctcttc gtgaccgggc ggctcaagga tctaatcatc atcggcggcc acaatcatta
     4441 tccgcaggac atcgagcgga gcgtcggaga agcgcatccc gcactcggag gtggcggctg
     4501 tgcggcattc tctatcgagg tcgagggtcg ggaggaattg attgttgtgg cggaggcgac
     4561 gggccggtcc ggccctcccc cagccgaact gcggcgtgcc attcgcaccg cggtgtcggt
     4621 gcatcacggt ctcggggtcc gggacatcct gctgatcagg aggggcggca ttcccaggac
     4681 cacgagcggc aagatccggc gcggcgcctg ccgcgccgcc tacctcgctc ggacgctcga
     4741 tgcctggggg cagccatgaa atttggaatg ttcatcagtc tccagcaccc gcgcccgtgg
     4801 agcgagaacg acgaacgccg gctcctggac gacgcgctgc ggcaggtgga gctgggagac
     4861 cgactcggcg tggattacgt ctgggcccag gagcatcact tcctggaaga gtactcgcac
     4921 tcctcggcgc cggaggtgtt tctcgccgcg tgcagccagc gcacgagtcg gatcaggctc
     4981 ggccacggta tcgcggtgat gtcgccgtac ttcaacgccg cggctcgcgt cgcggagcgg
     5041 atcgcgacgc tggatctgat cagcgggggc cgggtcgaat ggggcaccgg cgagtcgggg
     5101 agccggatgg agctggaggg cttcggggtc agcttcgtgg acaagcgccc aatgtgggcg
     5161 gaggcggtcc gcgagtgcgc ccggatgcag tgtctcgacc cctatcccgg ctatcaagga
     5221 aagtacttct ccatgccggc ccgaaatgtc gtcccgaagc ctctccagaa gccacatccg
     5281 ccgctctggg ccgcgtgctc caatcgcgac agcctcaagc tcgccgcccg gctgggcatg
     5341 ggagcactga ccttcgcctt caccgacgcg cgggaggcca gcttctgggt cgaggaatac
     5401 tacgagacgt tcaggagcga gtgcacgccg atcggtctcg cggtcaaccc gaacgtggcg
     5461 atgctgaccg ggttcatgtg tcacgaggac gaggcggtcg cccggtcgcg cggagacgca
     5521 ggggcacagt tctttgcctt cagcctcggc cattactggc gcgatggcat tcacgtgccg
     5581 ggccgtaccg atctctggaa ggagttcatc cagcgtcccg acgaccacgc ggaggcggtt
     5641 tcccgcgagc gcatgaaggc cgggatggaa ggcatcggaa gccctgccca gctgattgac
     5701 aactttcggg cctatgaaga ggcgggcgtc gatcagctca ttcttctgca ccagtgcggc
     5761 ggttaccggc aggagcacgt ctccgcgtcg ctcgagctgt tcgcgaatcg ggttctcccc
     5821 gagttcaagc aacgtgacgg cgcgcgtgag gagaagaagc ggcgcgagct cgcgcccttc
     5881 atcgccgcgg ccctcgaccg gatcccggcc ctggacgttc ctgccgaact ccccggcgtg
     5941 gcggcctatc ccaggctctg ggccgagaaa ggggcaggga cagaggcact cgccccggac
     6001 cggcggccgg gcatggcggc actctggcag ttgcaggtcg ggggacatga cgcttcgcat
     6061 ggagccgacc ggtgagcgag gcggagattc gcgcttggct ggtcgccgag atcgcgcgca
     6121 ccgtgcggct cgatccttcg gagatcgaca tccgcgagcc gttcgatgcg tacggattgg
     6181 cctcggccga cgcagtcggg ctctcgggaa cgctcgagca gctgctcggt cgggagctct
     6241 cgccgaccct catctacgac tatccgagca tcgccgctct ctcgcgacac ctgggtggtg
     6301 ctcccgcaga gaagagcacc ggctccgcgg cgggcggggc tggggtgccc tcggcgggcc
     6361 cgcacgagcc gatcgcgatc gtgggcatgg gctgccgttt tccgggggcc gagaatccgg
     6421 aggcattctg gcggctgctc aaggatggcg ccgatatgat ccgcgaggtt ccgccggatc
     6481 gctgggaggt cggcgcattc ttcgaccccg acgccgcggt tcctggcaag gcaatctccc
     6541 ggtggggcgg gtttctcgac caggtggatc gcttcgaccc cttcttcttc gggatctcgc
     6601 ccggcgaggc ggagggaatg gatccacagc agcggctcct cctcgaggtt gcctacgagg
     6661 cgttcgagga cgcgggatac tcgatgcggc ggctggccgg aagccacacc gccgtgttcg
     6721 tgggcatctc ggtcaatgaa tacggcttcc ttcaagtcgg ccgccacgag ctcatcaacg
     6781 gccactcggg aacgggagcg gcgctctcgg tggcggccaa ccggatctcc tattccctcg
     6841 acctccacgg ccccagcgtt gccgtggaca ccgcgtgctc ctcctcgctc accgcggtcc
     6901 acctggcctg ccagagtctt cggtctgggg aatcggagct cgccctggcc ggcggtgtga
     6961 atgtggtgct ctctcccgag cattccattg cgttcaccaa ggccggcgtc ctcgcgcccg
     7021 acggccggtg caagcccttc gatgccggtg cgaacgggta tgtgcggggc gaggggtgcg
     7081 gactggtggt gctcaagccg ctcgcccggg ctctggccga cagcgacccg gtctatgccg
     7141 tgatccgggg cggcgccgtc cgacaggatg ggcgcaccaa cgggctcatg gctcccaacc
     7201 gcgaggctca ggaggcggtc cttcgcgccg cgtatgagga tgccggcgtt gcgccgggcc
     7261 gggtccagta cgtggaggct cacgggaccg gaacgttgct cggcgacgcg atcgaagccc
     7321 aggccctcgg ggcggtgctg tcgtccggac gggcggatgg accgtgcgcg ctcggctcgg
     7381 tgaaaagcaa ctttggccac ctcgaggccg ccgccggcat tgccgggctt atcaagaccg
     7441 ccctctcgct caagcaccgg acccttactc cgaccctcca tttcacgaga cccaatcccc
     7501 acattcggtt cgaccggctg aacctgcggg tccagcagac ggtggcagca tggccgcaac
     7561 atgacggaac cgccatcgcg ggagtcagct cattcgggtt cggcggaacc aatgcccatc
     7621 tcgtcctcga agaagccccg atggcggacg ggacagcgga ggctggtccc ctgccagcgc
     7681 aactcctgcc cctttccggg cacaacgatg acgcgctccg cgaggtcgcc gtccgcttcc
     7741 gggatcgggt gacccgcgag ccgtccaatg ccggcgtctc cctcggcgat ctctgcgcga
     7801 gcgcaggcat ccggcggaac catctcagcc gccgagtggc cgtgatcgcg cgctcaaacg
     7861 ccgagctggc agagcgcctg gaggatttcc ttcgcggcac cgaccacccg gacacgattg
     7921 tcggcggaaa cacggtcccg gaggactcgc gactcgtgct ggtgttttcc ggccagggat
     7981 cgcagtggcc cgggatgggc cgcaggctcg ccgtggagga gcccgccttt ggcgccgccc
     8041 tggagcgctg cgatgccgcc ctgcgtcctc acctgacctg gtcggttcag gaggagctcg
     8101 cagcagtcgg ggaaagcgcg cgactcgacg acatcgaagt cgtccagccg gtcctcttcg
     8161 cccttcaggt cgcgcttgcc gcgctctggc gctctttcgg agtggagccc gatgccgtgg
     8221 tcgggcacag catgggagag gtcgccgcgg cccacgttgc gggggccctg agcctggagg
     8281 acgccgcccg catcataacc gcccgaagcc ggctgctcgc gcagctcagc ggccacgggg
     8341 gcatggcggt cgtgggactc tccctcccgg agactgcctc cttcattgcc accgttgacg
     8401 gaggcctttg gattgcggca accaacggcc cctcctcgac cgtagtcgcc ggaggaaccg
     8461 ccgagctgac tcggctgatc gaaaagctgg agggtcaggg gatcttctgt cgtctggcca
     8521 aggtcggggt ggccgcgcac ggcgcccagg caatgccgct ggccgaggag ctccgacgct
     8581 gccttgaggg actggagccg ccgtcggcga ccctgccgtt catctcttcg gttaccggcg
     8641 gcgatgccac cggcatgctg ctcgacggcg attactgggc ccggaacctg actgaaccgg
     8701 tcaacttcgc cggtgcggtc gggcacttgc ttcactccgg gtaccggaca ttcatcgaag
     8761 tcagcccgca tccggtgctg cagagctcga tccagcaggg aatgatgcag ttcgcgtatg
     8821 atggcctcgc actcccctcg cttcgcagcg gggaggacgg gcggacgtcc ctgctgcgct
     8881 cgctggccgc gctccatgta tctggacggg atatcgcctg gcgtggtctc tcacgccacc
     8941 gacgattcgt ctccctcccg acctacccgt ggcagcgcga acgcttttgg atccaagccc
     9001 cggcgaagcc tggccggccc cgaacgagcg gctcggaggc gggccgcggc cagagccacc
     9061 ccctcctcgg ggaaccggtc gcgctggcgc accaacccgg ggcatacctc tggcaacccg
     9121 ctctcgacgc tggtcgggaa gcgcttctgc gtgatcaccg ggtcaacggc gagatcgtgg
     9181 tcccggcagc cgcgtatctg gaaatggcgc tgtcagcagc cgccgaagcc ggcatcgcgg
     9241 atacccacct actccgtgat ctgagcttca cgcgggcgat gaccctgggc gagagccaac
     9301 ggcgcacgct tcaggtgacg ctcttcccgg cggagcatgg cagcctttcc ttcgcggtgt
     9361 acagccggcc cgccggagaa ccaccgggcg actggacgct gcatgcgcag gccaccttcg
     9421 tgaccgcgga tgctgaaacc gattcctgga gtcccgtatc ggcgccccca agcacgctcc
     9481 aggagcaatt cccagagcag atcccgcccg aggagctcta tcgatcgctg cggagccgtg
     9541 ggctggagta cggtcccgga atgcgctcca tcgtcgagat tcggcggagc gggagcgggg
     9601 cgctcggaag gatcgtgctg cccgattcgc tccgagccgc gtcgaagcac tatcgcatcc
     9661 acccggccct cctcgacggc gcactccagg ccgtggcggc gatcggcgtg ctccccggtg
     9721 agcccgaggc cgccgacaca ttcgttccca tcgggtgccg gagcgtggcg ctccggggga
     9781 gtggcgccga gaggctctgg agccgcgtcg tgctgaagtc cggatcgggg accggtgccg
     9841 gtgagatcga atgtgatgtg gagctcctcg acgaatccgg gatgatcctg gggcagctcg
     9901 acggattccg gctcgcccgc atcagccgga gtcgttctcc cattcctccc ttaccgcggg
     9961 acatctggct ctacggtgtg gattggattc ctgtcctctg gcccgcgccg caaaacgagg
    10021 agggcccggc aggcggcgct cgcggccgct ggattgtcgt cggggacgat tccggcctcg
    10081 ccctggacct gaagcggcaa ttcgaggcac gaggcgacaa ttgtcggatc atcgcaccgg
    10141 atcaaccgct cggcggcgaa ccctccccgg tccggggagt gatctacctg gcgagcccct
    10201 caggggacga ccccaccacg caatgcaatg gcctcgccgg cctggtccgg agtctcacgg
    10261 cggcgagcgc cccgctcagc acgttcaggc tctgggtagt gacgcaggga gcgcaatcgg
    10321 ttcggccggg agatgcagtc tccgtcgggc tggcgcccct ctggggactg ggcaagacga
    10381 tcgccttcga gctcccggtg ctccgatgca ccctggttga tctcgacccg tcgctccctt
    10441 cgctgagtgc gtccgagctc ctgctgcggg aactatcgtg cgccgatctg gaggaccaag
    10501 tggccctccg cggcaacgag aggctggtgg cgcggctgct gccccaggcc ctcgaagcca
    10561 gcctcccctc ctgtcaccta ggcggatcac ccctcgttgg tcccgacggc acctacctga
    10621 tcaccggcgg tctgggaggg ctcggcctca ccgtcgcgca atggatgatc gaacaaggcg
    10681 caaggcacct tgtgttggtg gggcggaact cgccctctcc cgccgtcgcc agcgcgctcg
    10741 ccacgatgcg ccactcgggt gccaaggtag tggtgctggc tgcggacgtc gcccgcgccg
    10801 tggacgtcac cggcatcttc gatcacattc gagagacgat gcccccgctc cacggcgtgg
    10861 tgcatgccgc gggcgttctc gccaaccggc ccgtcacgga catcgacgcc gagtcgctcg
    10921 cgagggtcat ggcccccaag gtcgccggcg cctggaatct ccacctggca tctcggggcg
    10981 aagcgctgga ttttttcgtg ctgttctcct ccgccgtttc ggttctggga tctccgggcc
    11041 agggcagcta cgccgccgcg aacagctatc tcgacgctct cgcccatcac cgccacacgg
    11101 aggggcttcc cgccatcagc atcaactggg gaccgtggtc ggaggtcgga ttggtctcgg
    11161 gtggcaactt catcggaagc cggggcaacc ccggggatcg tggggtcaag ggcatcgacc
    11221 cggagagcgg ggtcctggtc ctcggccgcg ccatgatgag tcgccttccc cagctcacgg
    11281 tgctcccctt cgaccttcgg agcctgctcg atctctatcc cgcggcggcc aggattccgc
    11341 tcttcgccga ggtcggcggg cgagagaccc acgtggcgcg cctctacgcc aggcccagcc
    11401 tgcgtcagga ctacctggcg cctcgcacca ccgtcgaacg gaagctggcc gagttgtggc
    11461 ggcagaccct tcgcatcaat cgggtcgggg tgcgcgattc cttcttcgag ctgggcggcg
    11521 attccgtgct cgccgcccag atcattacct ccgcgcaccg gaccttcgga gtaggaatag
    11581 acctcaggga agccttccag tcgtttacca tcgagagtct ggccaagcga attgagacgg
    11641 cgcaggccgc accggccgac ggtgcgcctc tcgaaaggat ggcggccggc cccggtccgc
    11701 tttcgttcgt gcaggagcgc cagctattcc tcgagctgct cgatccattc accgcggtca
    11761 ataatctcgc cgtctgtctg cttctcgagg gcgcactcga gcccgcgatg cttgaggggg
    11821 ccgccaaccg ggtcattgca cgtcatgagg tgctccggac cagcttcgat accggccacg
    11881 gcaggccgat gccgaggatc gagccggcgt tgacgatggc cctcgaggtc gtggacctca
    11941 cgcatcatcc cgccgatcgc cgcgcggaag ctcttcgact ggccgagctc gacgcccggc
    12001 ggcccttcga actcgaccat cctcccctgc tccgggcccg gctcttccgg ctggccccgg
    12061 aatcccacgt gctggtgatc gtggttcatc acacgatcgc ggacggctgg tccctcggcg
    12121 tgttgctgcg cgagctcttc ttccgctacc gggcgctcgc caccggtacg acgggggagc
    12181 ttccgccgct cccgattcaa taccgcgact ttgcgtcgtg gcagcgggac ccggagcagg
    12241 cgcggatctt cgagcgccaa ttggagtact ggaagaagca gctcggcggg gagctgccgg
    12301 tactcgacct gccggtggat cgcccccgcc ccacccgcca gacctttacc ggcgccaccc
    12361 ggcgattccg catttctgcc tcgctcgggc gggcgctgaa ggaaaggagc agccagtacg
    12421 acgcgacgcc gttcatgctg ctggtggcgg cctttcaggc cctgctccac cggtactgcc
    12481 ggcaggacga cattctgatc ggcactccga tcgccggccg cagccggccc gaaaccgacc
    12541 agttgatcgg cccgttcatc aacacgctgg tgctccgcac cgacctctcg ggcgatccga
    12601 gtttccgcga gctgctgaac cgggtccggc aggtggcgct catcgcctac gccaacgagg
    12661 acctgccctt cgagcgactg gtggcggaac tgcggccgca acgggatctc agccggaccc
    12721 cggtgttcca ggcgatggtc gtttttcaga attcaccgct tccggatctc agcactcccg
    12781 gcctgtcgat cgagctcctg ccgctcgacc gcggcgccgc cgagttcgat ctcaccatga
    12841 cggtgagtga ggctcgggaa ggattcgaat tcgccttcga gtacaacagc gatctcttcg
    12901 accggcccac gattgagcgg cttggcggcg ccttccagtt gctgctgtcg gaagccgtgg
    12961 cgcgtccgga gacacgggtt tcggcattgc cggtgatgac cgagacggaa cggcggcatc
    13021 tggtcgtcca gctcaacgag acccgggccg agtacccgcg cacggaatgc ctgcatcagc
    13081 tgttcgaggc ccaggcagcg cggacccccg acagcgtggc ggtaatctgc gagggcgtcc
    13141 gattgagcta tcgcgaactc gaccggcgga ccacggcgct tgccacggcg ctgcagcacc
    13201 ggggcatcgg tccggacgta acggtcggcg tgtgcctccc ccgctcgccc gacctcctgg
    13261 tgagtctcct ggccgtcctc aaagcgggag gggcctatgt gccgatcgac ccgacaaccc
    13321 cggcggaccg gattcgctgc attcaggagg atgcgggcgc aaagctgctg ctcacccgtg
    13381 agcgagtgga gcagctcctc gcgccaccaa ttggtccagg agcgcttcgc cgcacctcgg
    13441 tgccgaccca cttggcatat gtgatctata cctcgggttc gaccgggcgg cccaaggggg
    13501 ttcgcatctc ccactcctcc ctggtcaacc tcttctggtc cctgggaaca tctctcgggc
    13561 tcggagccgg agaccagctt ctggcggtga cctcggtctc cttcgacatc gcggcgctgg
    13621 agctgttcct gccgctgctc gtcggagcga cggtcgtgct ggctaccgac gacatgacgc
    13681 gcgaccgccg gcgactgcag gaagcgatcg aggcccacgg agtgaaggtg atgcaggcga
    13741 ctccatccct gtggcgcttg atgctccagg gaggctggcg cggggccccc gggctgctgg
    13801 cgctctcggg cggagagcca ctcacccccg agctcgcgga gcagctgggg agccgggtgg
    13861 gaagcctctg gaatctctat ggacctacgg aaacgacaat ctggtccgcc gcgggcaggg
    13921 ttacgccggg acgcgggccg atcacgatag ggcggccgat cgccaacacc cagctctaca
    13981 tcctggatcc gcagctccaa ccggtgccca ccggggcgat cggcgagctg catatcgggg
    14041 gagacggcgt cgcccagggc taccagaacc tgccggaact caccgccgag aagttcatcc
    14101 cggtgccgcc cgggctcccg gcacccaccg gggcacgtct cttcaagacg ggagaccggg
    14161 cgcgctacct gccggatgcc gagatcgaag tgctcgggcg cttcgaccag cagatcaaac
    14221 tgcatggctt ccgcattgag ccgggtgaca tcgaatccgc gttgtgccgg caccctggcg
    14281 tgcgcgaggc cgccgtcatt ccgcggactg gtccatcggg cgacgcccac ctggtggcct
    14341 acgtggtctc cgatcgcgac ccggcaccgg gccggaccga gcttcgcgac ttcctgcgga
    14401 gcctcctccc cgcctacctg gtcccctcgg tcttcgtgtc cttgccgcga ctgccactca
    14461 cgaccgccgg caaggtcaac cgacgcgccc tgccggagcc gccgtcggtc accgacgcgc
    14521 cggccttcgc accgcccggg acgccgctcg aagagctcct cgcgacgatc tacgcgcagg
    14581 tgctcggcgt cgagcgtatc ggcatccatg acaatttctt cgacctgggg ggcggatcga
    14641 tccagatcct ggagatcgtg gtgcgggccc agtcggctgg cctgacgctc gcgcccgagt
    14701 cgttctttga gcaccagacg gtatcggagc tcgcctcata ctgcggcctg cgaggcggca
    14761 ccgccgatga ctgatggcct gcccgaccgc cggacgctca tcgagagcct gggcgtctac
    14821 ctcccggccc gccaggtgct caccgaggag gtgctcgagg gctgcgcgac ccggccgcgc
    14881 ttccccctcg agcggctctc cggcatcaga tcccggcggg tggcgggcga gggggaattc
    14941 ggcattgacc tggcgcagca ggccatctcc cgctgtctgg ctggctcgaa gcgcggacca
    15001 cgcgatgtcg aactgctcat cagcgccagc gtgggccatt gcgacgggcc gggtctgtgc
    15061 atttcccacg agccgagcac ctcgctccga ctgcaacggc ggttcggctt cgaccgcgcc
    15121 atggtgttcg acgtggccag cgcctgctcg gggatgttca cggcgatcgc catcgtggat
    15181 gccctgatca ggggtggcgc catcgagtgc gggctggtgg tgagtggcga atacatcacc
    15241 cacctgggca cgacggcgca aaaggagatc gcggggccgc tggacccccg gatggcgtgc
    15301 ctgaccctgg gtgacgcagg cgccgcggtc atgctcacgg ccacgacgac tcccggctgc
    15361 ggcttcgaag ccctcgatct ctgcaccttc ggcgcgtact cgcgatactg cgtggctctg
    15421 cccaccaccg agccgcatgg cggggccatc atgttcaccg acgccctcaa gctcaccgaa
    15481 gcagcgaccc ggcacggggc cgcccatgcg atggtcacag tgaaacgggc gggctgggcg
    15541 ccggcgtcct tccactcgct gatcatgcac cagacctcca gcactgccct cgcaagcgca
    15601 atgcgagaga tcaaccgggt catgaagggg ccggtctgcc acgcggggaa caccatcgac
    15661 aatctggcgg agcgggggaa caccgcctcg acgacccact ttgtcgccct ggcggacaac
    15721 cttgccaacg gcaggatccg gtcgggggac cgggtggttt ttgccgtcag cggttccgga
    15781 ctgaccgtcg gcaccggcct ctatgcgatg gacgatctcc cggatcggtt cggtggagcg
    15841 gtggcttcgg ccccgctgcc gtcgaacggt tcccggcgca ggcgcccgcg aagcacaccg
    15901 gagacccccc tgatccggat cgagagcgtg ggaacggccg cccactctcc cgccgggacc
    15961 atcgagacgc tgtcgctcct ccgcgaggcc gccatcgaat gcctgggccg ctcctcctac
    16021 gatcgcaggg atctcggcct gctcatctac gccggagtct atcggagccg gttcctgtcc
    16081 gagcccgcca tcgccgccct gctggcggga gagctggacg tcaacgccgc catgagtgcc
    16141 gaggatggcc gacgtaccct ggccttcgac gtgttcaacg gcgcggtcgg cttcctcagc
    16201 gcctgctacg tcgcggccgc catgatccgg gccggcaaga ccgtcaccgc gatgattgcc
    16261 gcctctgagg tcgagaataa cgccggcgca ttcccaagcg atctgctggg aatcgaggag
    16321 accgggtcgg cgctgatcct ggaccgggcc cgcggccgag cggcaggctt cgggcccttc
    16381 ctgttcaagt cattcaccga gcacgaggac gcctacacct cgcaggccat caaccgggac
    16441 gaaagaccct gcctgcgttt cgcacgagat ccggatctca agcgctacta tctcgcagcg
    16501 atcaccagca cggttaccga gctcctcgcg tcggagggtc tcgcgatttc cgggatcgcg
    16561 cggatcctcc cgcctcagat atcggcggac ttcctcacac ggcttggcca ggcgctcaac
    16621 gtcccgccgg acaggctggt ggacgcgatg ccaggtgacc gggatctctt cagctcgtcg
    16681 ctgccctacg cgttccgatg gaccctggat cgcggtctgg cgcagccggg tgatgtggga
    16741 ctcatcatca cggtcggatc gggagtgcaa gttggctgcg ccctctacta cttctagccc
    16801 gcgttccggt ggagctcgac cgccgggtcc gagatcccgc acgcccttgg gccagttgat
    16861 cccgctccgg cgcgacatcc tgggattcct cagcatggtg gcccgggagt acggtgacgt
    16921 cgcctctttc tccgtcggcc cgatcggtgc ggtcttgctc aatcaccccg accacatcag
    16981 ggatgtcctg ctgaccaacc accagaactt cgtcaaggga cggccgctgc acctcgccaa
    17041 gcagctcctg ggcgaagggt tgctgaccag cgaaggcgag ttccatgcgc ggcagttacg
    17101 aatcgtcagc cccgcgtttc acctgcagcg gctcgtgagc tacggaccgg tggtgaccgg
    17161 ctacgcgatg cggcagagcg agggttgggg tgagggcggc agcgttgaca tgctcgatga
    17221 aatgatccgt ctggcgaccg cgatcgcggg caagacgatg ttcaactggg acatcgattc
    17281 ggcggccgcg gccggcatcg gaaaggcgct ggacgacgct gtcagcctgt tcagccgtgt
    17341 gtcggtgccc ttcgccgagc tgctgctgcg gctccccctc ccttccaatc ggcgcttctt
    17401 ccgggccagg gcccatctcg atgccgcgat ctaccggctc atcggcgagc gacggcgcga
    17461 aggccgcgac cgtggcgatc tcctctccat gctcctgctc gcccaggaca gcgagggcga
    17521 ccggggcggc atgacggacc ggcaggtacg ggacgaggcg ctgaccctgt ttctgaccgc
    17581 ctttgatacc gtgtcgctcg cgctcacctg gacctggtat ctgctggcg
//
LOCUS       DASYRV010000299         8849 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2345627, whole genome shotgun sequence.
ACCESSION   DASYRV010000299 DASYRV010000000
VERSION     DASYRV010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8849)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8849)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8849
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2345627"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1263)
                     /locus_tag="VGQ24_07780"
     CDS             complement(<1..1263)
                     /locus_tag="VGQ24_07780"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HEV8454774.1"
                     /translation="MDQDEVLDKGYDATLLRRLLVYLRPYRGLTVLAVLLLLMGAGLA
                     LVGPLLTQRALDVAIPRHDIGLLGTLAALFLAALLLEFVVEYGQTLLTTYIGQRVMYD
                     LRMQIFGHLQRLSISFFDRNPVGRLMTRVTSDVETLNELFSSGLVTVFGDVFTLIAIM
                     TMMLVVDWRLALVTFSVIPLVWLTAMIFRRRVREAFRDIRTRLARLNAYLQERLSGMR
                     VVQLFGREADSAARFAALNREHLEAHLRSITIYAVFFPVVEVLTAVAMALLLYYGGLR
                     TIHGTLTVGVLAAFIQLTRRFFQPLQDLSEKFNLLQSAMASSERVFALLDQPVSVLEP
                     ARPVLLPQPIRGEVRFEGIWFRYGPDGPWVLRDVSFTASPGQTIALVGHTGAGKTTIV
                     NLLLRFYDPDRGRILIDGVDIRQLSTSDL"
     gene            complement(1267..2343)
                     /locus_tag="VGQ24_07785"
     CDS             complement(1267..2343)
                     /locus_tag="VGQ24_07785"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HEV8454775.1"
                     /translation="MPRLLTPKLLLRGFEIFVVASLAGFGVTLLYGNDFPAFMAALGR
                     LHWIWILAGLGLASLDWIGGGLRLWVCARHIYPKPPLKGMILGGGMGAWAGYITPLNS
                     GAGPMTMYTMRRYGVPLPVAVTATFISFVATILFFAIAGPLAVVFGAGRSLGQRGNVL
                     GLSLFDLFLGSLTIIAGIGVLMAFVLFFPKLVRDLIHRAAEAIGRRNRRVADRLEKLR
                     AGIDQAHESLVAFNSPRGWLALFWATILSGPSHANKLLAGYVALRALGIHANFVDILL
                     VQTLVMFLLYFAPTPGASGVGEVLSAAVMSSYVPRELTPIYILIWRLTLSYFTLAFGF
                     LVFSSWVRRGLKGVEETPLPEPAG"
     gene            2342..5203
                     /gene="uvrA"
                     /locus_tag="VGQ24_07790"
     CDS             2342..5203
                     /gene="uvrA"
                     /locus_tag="VGQ24_07790"
                     /inference="COORDINATES: protein motif:HMM:TIGR00630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEV8454776.1"
                     /translation="MDGWKLAGKRGSGEVAYFHPMSQSVIRIVNARQNNLQGITVDLP
                     HRSLIVVTGPSGSGKSTLAFDTIYAEGQRRYIESLSTYAKQFLDRMPKPQVDRLEGLA
                     PAVAIEQRNPVVSSRSTVGTATEVYDYMRLLWARIGKCYCRLCGGPVRRDTAESACGD
                     TMAAAVGPIQVCFPLPPVARLTHAAVVENLRALGFVRVVADGVPHHLDDLPPDLELTR
                     AEELLVVVDRLTAGPSSAGRLNEALATAFQEGEGIALVLHQRGRLRFTEFAACSSCDT
                     PAASVTPALFSFNNPRGACSTCNGFGAVLEYDESLIVCDPGKSLAQGAIDPWTKPRYE
                     SRRRILLEFARSLGADARKPWSQLTPAHRRELLYGKKGRYLGIFPFLKGLEEKRYKQY
                     IRVFLRQYQLAQTCAECGGSRLNPDALSVRIGNDTIGAVARGSVDAVHRWLHGLSLTQ
                     TEREIAQLIVDQLDDRLSFLQDVGLGYLTLDRQTRTLSGGEAQRISLSNALGSRLVDT
                     LYVLDEPSIGLHAKDTDRLLALLRRLRDAGNTVLVVEHDLAAIQQADFMLELGPGSGE
                     HGGRVVHAGPVREAKASLTGQYLTGQKRIAVPSIRRPTGPQWLRVRGATLHNLRGVDV
                     DSPLGALTAVTGVSGSGKSTLLHDVIYRHLEAKLRGEHSAKSHLGEPVGAIASMTGWE
                     FLQDVLLVDQSPIGRSPRSNPVTYIKAFDEIRELFAGQPLARQRKYTPATFSFNLPGG
                     RCEGCEGAGHVQVQMVFMADVFVPCEACGGTRYRPDVLDVRIQGKSIHDVLQWTVDEA
                     INRFRHQPRLGHALWQLQQVGLGYLRLGQPATTLSGGEAQRLKIARELTQAGKREGRR
                     LYILDEPTTGLHLDDVRVLIHVLDRLVDAGHTVLVIEHHLDVIKRADWVIDMGPEAGD
                     AGGSIVAQGTPEEIAEVPTSHTGRYLQPLLAPAQAVLAG"
     gene            5210..5659
                     /locus_tag="VGQ24_07795"
     CDS             5210..5659
                     /locus_tag="VGQ24_07795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454777.1"
                     /translation="MRLEDGTYGKQQANSFASPLIYFVDTGSDGVKVCGPSKDAVCDL
                     AGSVYGMEFDAADPTHNAQLTLLARSSGAESGWASPDNVDASLSTLMVQEDPAYPGFK
                     RSPKIWAFPLTAGGVGAPTAVVEVNNPTCDEPTGNCWESSGIIEADG"
     gene            complement(5751..7184)
                     /locus_tag="VGQ24_07800"
     CDS             complement(5751..7184)
                     /locus_tag="VGQ24_07800"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEV8454778.1"
                     /translation="MDPDEFRQHAHQVADWMADYFRDVGMMPVTPGVQPGDILRQVAS
                     GPPEQGEPFQRLFQQFREIIMPGMTHWNHPGWFAYFPANNSPPSVLAEMLTATLGAQC
                     MSWATSPAATELEQAMMEWLRQMLALPPGFVGVIQDTASTATLVALLSARERATGHDA
                     GLKGLAATRSRLTVYTSTEAHSSVDKGVKLAGYGVERLRRVAVDTSYAMRPDELERAI
                     AADLEAGLTPACVVATVGTTSSTAVDPLAAIAEICRRHGVWLHVDAAYAGAAAIVPEL
                     RHLFDGAEHADSFVFNPHKWLLVNFDCSAYFVRDREALLRTFQVTPVYLRTDQDRDVV
                     NFRDWGIQLGRRFRALKLWFVIRSYGVEGLRAMIRRHVELAQELAGWVEGDPDFELMA
                     PVPFGLVCFRYRRDGVSDRQVDDLNRRLLARVNATRRVHLTHTQLGERYVIRMAIGQR
                     ETERHHVEEAWSLIRDAAKAVSSLRGI"
     gene            7337..8164
                     /locus_tag="VGQ24_07805"
     CDS             7337..8164
                     /locus_tag="VGQ24_07805"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEV8454779.1"
                     /translation="MVLAQVFFAAMNVCTRLGARELPWSEIAAARFLVGVLIALGLAR
                     YRDSPLRITDRPNTWRRSIFGTTAAVCTFYALASSRIALGDAVTLGATAPIFVALLSG
                     PLLDERVGTHVGLAVLLGFAGIVAVVRPSFGGGIPVALIATVGAAFYALAMIWLRKIG
                     PGESHEAVVLHFSLVASVTFLALSIPVWRWPGWPGAGFLLGAGLAGGGAQIAMTRAYS
                     LARAAPVTAMSGLSIVFTYLLAIPVFGDQPTAWQVTGSFLVIAASVLLTVRTEPALS"
     gene            8199..>8849
                     /locus_tag="VGQ24_07810"
     CDS             8199..>8849
                     /locus_tag="VGQ24_07810"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HEV8454780.1"
                     /translation="MASPALTPTPIRPHGLCFDPDAACRHLAAADPHLDALMIRVGAF
                     SMRPEPTQSLFTALLRSIVYQQLSGKAAATILGRVNRLFPPRRFPTPGELLEISPERL
                     REAGLSAAKTAAVRDLAVRTLDGTVPSLARIRRMEDEEIIERLMVVRGIGRWTAEMLL
                     IFRLGRPDVLPLSDLGVRKGFGMTFRTRRLPEPSVMARRGERWRPYRSVATWYLWRA"
BASE COUNT         1553 a         2922 c         2877 g         1497 t
ORIGIN      
        1 cagatccgac gtgctcagct gccgaatatc caccccgtcg atcaggatcc gaccccgatc
       61 cgggtcgtag aagcgcagga gcaggttgac gatggtggtc ttgccggccc cggtgtgtcc
      121 caccagcgcg atcgtttgac ccggcgaggc ggtgaacgac acgtcgcgca ggacccacgg
      181 accatccggg ccgtaacgaa accagatgcc ctcgaagcgc acttcgccgc ggatcggctg
      241 cgggaggagc accggcctgg cgggctccag cacgctgact ggctggtcca gcagggcaaa
      301 gacccgctcg gatgaggcca tggcgctctg gaggaggttg aacttttccg agagatcctg
      361 cagcggctgg aagaacctgc gggtgagctg gatgaacgcg gcgagcaccc cgaccgtcag
      421 cgtaccgtga atggttcgaa ggccaccgta gtacaagagc agcgccatcg ccaccgcggt
      481 cagcacctcg accaccggga agaacaccgc atagatggtg atcgaccgga ggtgcgcctc
      541 caggtgctcg cgattcagcg cggcgaatcg ggctgccgag tccgcttccc ggccgaagag
      601 ctggaccacc cgcatgccgg agagccgctc ctgaaggtac gcgttgagcc gggccaggcg
      661 agtccgaatg tcacgaaacg cctcgcgcac tcgccgccga aagatcatgg cagtgagcca
      721 caccaggggg atgaccgaga acgtcaccag ggcaagacgc cagtccacga ccagcatcat
      781 cgtcatgata gcgatcagag tgaacacatc accgaagacg gtgaccaggc cggacgagaa
      841 cagctcgttg agcgtctcca cgtcggatgt gacccgggtc atgaggcggc cgaccggatt
      901 ccggtcgaag aagctgatac tcagccgctg gaggtgcccg aagatctgca ttctgagatc
      961 gtacatcacg cgctggccga tgtacgtggt cagcagcgtc tggccgtact cgaccacgaa
     1021 ctcgagcaga agagctgcca ggaacagggc cgcgagggtc cccagtagac cgatatcgtg
     1081 cctcggaatg gcgacatcga gcgcgcgctg ggtcaacaga ggcccgacca gggccaatcc
     1141 ggcgcccatg agcagcagca ggaccgccag gacggtcagg ccacggtacg ggcgcaggta
     1201 caccagcagc cggcggagta gcgtggcgtc gtagcccttg tcgagcacct cgtcctggtc
     1261 catgcgttag cccgccggtt ccggcaatgg ggtttcctcg actcccttga gccctcgccg
     1321 gacccagctg gagaacacca ggaatccgaa tgcgagcgtg aagtagctca gggtcagccg
     1381 ccagatcagg atgtaaatcg gggtgagctc cctgggtacg taggacgaca tcaccgccgc
     1441 ggacagcacc tcgccgactc cggacgcgcc cggcgtcggc gcgaaataga ggagaaacat
     1501 caccagcgtc tgcaccagaa gaatgtccac aaagttggca tggattccca gtgctcgcag
     1561 cgccacgtag ccggccagga gcttgttggc gtgggaggga ccggagagga tcgtcgccca
     1621 gaagagcgcc agccagcctc gcgggctgtt gaaggcgacc aggctctcat gcgcctggtc
     1681 gatgccggca cgcagcttct ccagccggtc ggcaacgcga cggttccggc ggccgattgc
     1741 ttcggcggcg cgatggatca gatcccgcac cagcttgggg aagaacagga cgaacgccat
     1801 gagcacgccg attccggcga tgatcgtcag gctgccgaga aacagatcga acagcgagag
     1861 tccgagcacg ttgccccgtt gccccaggga gcgtccggca ccgaagacca ccgccagcgg
     1921 tccggcaatg gcgaagaaga ggatggtggc gacgaagctg atgaaggtgg cggtgaccgc
     1981 gaccggcagc ggcacgccgt atcgacgcat ggtgtacatg gtcatggggc cggcgcccga
     2041 attgagcggg gtgatgtagc cggcccaggc acccatgcct cccccgagaa tcatcccctt
     2101 gagcggaggc ttgggataga tgtgccgggc gcagacccag agccgaagcc caccaccgat
     2161 ccagtcgagc gaggccaagc ccaggccggc cagaatccag atccagtgga gccgtccgag
     2221 ggcggccatg aatgccggaa aatcgttgcc atacagaagg gtgaccccga atccagccag
     2281 cgaggccacg acaaatatct cgaaaccacg gagcagcagc ttgggggtga ggagacgggg
     2341 catggatggt tggaaattag cggggaagcg gggaagcggg gaagtcgctt attttcaccc
     2401 gatgtcccaa tccgtcatcc gcatcgtcaa tgcccggcag aacaatctgc agggcattac
     2461 cgtcgacctg ccgcatcgat cgctcatcgt ggtgaccggg ccctcgggct ccggcaagag
     2521 tacgctggcc ttcgacacca tctacgccga gggacagcgg cggtatatcg agtcgttatc
     2581 gacctacgcg aagcagttcc tcgaccggat gccgaagccc caggtggatc ggctggaggg
     2641 gctcgcgccg gcggtcgcca tcgagcagcg taatccggtg gtctcgagcc ggtcgacggt
     2701 ggggacggcg accgaagtct acgactatat gcggctgctc tgggcccgga tcgggaagtg
     2761 ctattgcagg ctgtgcggag gcccggttcg tcgcgacacc gcggagtcgg cctgcgggga
     2821 cacgatggcc gcggcggttg ggccgatcca ggtgtgcttc ccgctcccgc cggtcgcccg
     2881 gctgacccac gctgccgtgg tggaaaatct ccgggcgctc gggttcgtcc gggttgtggc
     2941 ggacggcgtc ccgcaccatc tggacgacct gcctccggac ctcgagctca cccgggcgga
     3001 agagctgctc gtggtggtcg accgtctcac tgccggaccc agctcggccg gacgcctcaa
     3061 tgaagcgctg gccactgcct ttcaggaggg cgagggcatc gcgctggtgc tgcatcagcg
     3121 cgggcgtctc cgcttcaccg agttcgccgc ctgcagcagc tgcgacaccc ccgcggcgtc
     3181 cgtcaccccg gcgctctttt ccttcaacaa cccacgcggc gcatgctcca cctgcaacgg
     3241 cttcggtgcg gttctggaat acgacgagtc gttgatcgtc tgcgacccgg gcaagagcct
     3301 ggcgcaggga gcgatcgacc cctggaccaa gccgcgatac gaatcacgcc gccggattct
     3361 gctcgagttt gcccggtcgc tcggtgcgga tgcgaggaag ccgtggtccc agctgacgcc
     3421 ggcacaccgg cgggaactac tctatggaaa gaagggccgc tacctcggca tcttcccttt
     3481 cctgaaggga ctcgaagaga agcgctacaa gcagtacatc cgggtctttc tgcgccagta
     3541 tcagctggcc cagacctgcg ccgagtgcgg cggcagccgg ctcaacccgg atgcgctctc
     3601 ggttcggatc ggcaatgaca ccatcggtgc ggtggcgaga ggctcggtgg acgccgtgca
     3661 ccggtggctc catgggctct cgttgaccca gaccgagcgg gagatagccc agctgatcgt
     3721 ggaccagctc gatgaccgcc tcagcttcct gcaggatgtc ggactcggct atctcaccct
     3781 cgatcggcag acccggactc tctccggggg cgaggcccag cggatctccc tatccaacgc
     3841 gcttggctcc cgcctggtcg acaccctcta cgtgctcgac gagccttcca tcgggctgca
     3901 tgcgaaggac accgaccgcc tgcttgccct gctgcggcgg cttcgcgacg ccgggaatac
     3961 ggtcctcgtg gtcgagcatg acctcgcggc cattcagcag gcggacttca tgctggagct
     4021 gggaccggga tcgggcgagc atggtggccg cgtggtacac gccgggccgg tgcgggaagc
     4081 caaggcgtcg ctgaccggcc agtatctgac cggccagaag cgtatcgcgg tacccagcat
     4141 ccgccgaccc actggccccc agtggctccg agttcggggc gccacgctgc acaatctccg
     4201 tggggtcgac gtggatagcc cgctcggcgc acttaccgcc gtgaccggtg tctccggctc
     4261 gggcaagagc acgctgctcc acgacgtcat ctaccggcat ctcgaggcga agctccgggg
     4321 tgagcactcg gccaagtctc atctcggcga gccggtcgga gcgatcgctt cgatgaccgg
     4381 ctgggagttt ctccaggacg ttctgctggt ggaccagtca ccgatcggcc gctccccgcg
     4441 ctcgaacccg gtcacgtaca tcaaggcctt cgacgagatt cgggagctgt ttgccgggca
     4501 gccgctggca cgacagcgga agtacacccc cgccaccttc tcgttcaacc tgcccggtgg
     4561 gcgctgcgag ggctgcgaag gcgccgggca cgttcaggtg cagatggtgt tcatggccga
     4621 cgtcttcgtc ccatgcgagg catgtggtgg cactcgctat cgtcccgacg tgctggacgt
     4681 gcggatccag ggcaagtcca tccacgacgt gcttcagtgg accgtggacg aggcgatcaa
     4741 ccggttccgc caccagccca ggctggggca cgccctctgg cagctccagc aggtggggct
     4801 gggttacctc aggctggggc agccggccac caccctctcc ggaggggaag cgcagcggct
     4861 caagattgcg agggagctga cccaggccgg caagcgcgag ggccggcgac tgtacatcct
     4921 cgacgagccg accaccggtc ttcatctcga cgatgtgcgc gtgctgatcc atgtgctcga
     4981 ccgcctggtt gacgccgggc acaccgtgct cgtcatcgag caccacctcg atgtgatcaa
     5041 gcgggccgac tgggtgatcg acatgggacc ggaggcgggc gatgcgggtg gatccatcgt
     5101 ggcccagggc acgccggagg agatcgccga ggtccccacc tctcacaccg gccgctatct
     5161 ccaaccactt ctcgcaccgg cgcaggcggt tttggccggg tgaccctccg tgcggctcga
     5221 ggatggaact tatgggaagc agcaggccaa tagtttcgcc agcccattga tctactttgt
     5281 ggacaccggc agcgatgggg taaaggtctg cggaccctcc aaggacgccg tgtgcgatct
     5341 ggccggctcg gtatacggga tggagttcga tgctgccgat cctacgcata acgcccagct
     5401 cactttgctc gcgcggtcgt ccggtgccga gagcggttgg gcgtcgccgg acaatgtcga
     5461 tgctagtctg agcacgctga tggtgcagga ggacccggcc tatccggggt tcaagcggtc
     5521 gccgaagatc tgggctttcc cattgacggc aggcggagtc ggagcgccaa cggcggtggt
     5581 cgaggtcaac aatccgacgt gcgacgagcc gacgggcaat tgctgggaat cgagcgggat
     5641 catcgaagca gacggttaac ctctcccggg atggtgggca gctgctctac ctcaacgtgc
     5701 ccggaagctg acattcccag ggtggcatcc tgaacggagc gagggaccgc tcagatcccg
     5761 cgaagggatg acactgcctt cgcggcgtca cgaatgagac tccatgcctc ctcgacgtga
     5821 tgccgctccg tctcccgttg tcctatggcc attcgaatta catagcgctc ccccagctga
     5881 gtatgggtga gatgcactcg gcgagtagcg ttcacccgcg ccagcaggcg ccggtttaga
     5941 tcatccacct gtctatcaga cacaccgtcg cgacggtagc ggaagcacac cagcccgaac
     6001 ggtaccggcg ccatcagctc gaaatccgga tcaccttcca cccaaccagc cagttcctgg
     6061 gccagctcca cgtgccggcg gatcatcgcc ctcagccctt caaccccgta gctccggatc
     6121 acgaaccaca gtttgagggc gcgaaaccgg cgccccagct gtatgcccca gtcacggaag
     6181 ttgaccacgt cgcggtcctg gtcggtgcgg agatacaccg gcgtgacttg gaaggttcga
     6241 agcagcgcct cccgatcccg cacgaagtag gcgctgcaat cgaagttgac cagcagccac
     6301 ttgtgcgggt tgaacacgaa gctgtctgcg tgctctgccc catcgaagag atgccgcagc
     6361 tcgggcacga ttgccgccgc gcccgcgtac gccgcatcta catggagcca gacgccgtgt
     6421 cgccggcaga tctcggcgat agccgccagc ggatccaccg cggtggacga ggtcgtgccg
     6481 acggtagcca ccacgcaggc cggagtcagg ccggcctcca gatcggcggc gattgcacgc
     6541 tccagctcat ccggtcgcat ggcgtagctt gtgtctaccg cgaccctgcg aagtcgttcc
     6601 actccgtatc cggcgagctt gacacccttg tccaccgagg agtgtgcctc cgtcgaggtg
     6661 tacaccgtca atcgcgagcg ggtcgcggcc agccctttca ggccggcgtc atggcccgtg
     6721 gccctttccc gggccgacaa tagggcgacc agagtcgccg tcgacgccgt gtcctgaatg
     6781 acccccacga aaccgggagg cagagccagc atctgacgga gccactccat cattgcctgc
     6841 tccagctccg tggccgcggg cgatgtagcc cacgacatac actgcgcgcc gagtgtggcg
     6901 gtgagcatct cggccagcac ggacggtgga ctgttgttgg cggggaagta ggcgaaccag
     6961 cccggatggt tccagtgtgt cattccgggc atgatgatct cacgaaactg ctgaaagagc
     7021 cgctgaaacg gctcgccctg ctctggcggc ccgctcgcga cctgccggag gatatccccg
     7081 ggctgcacgc caggtgtcac cggcatcatg ccgacgtccc ggaaataatc cgccatccag
     7141 tcagccacct ggtgcgcgtg ctgtcggaac tcgtcggggt ccatgagtgg gtctatgggc
     7201 tatgggctat gagctatggg ctgaagcaac cggacgatga tactacttta gagcgagaat
     7261 ggcctcttac cttcgacctt cctctccttc ccgtccttcc cgcctttccc gtctttccca
     7321 ccacggcctc ggctggatgg tgctggccca ggtgtttttc gcggccatga atgtgtgtac
     7381 ccggttgggc gcacgcgagc ttccctggtc ggagatcgcc gcggcccgct ttctcgtggg
     7441 agtgctgatc gcactcggcc tggcccggta ccgggacagt cccctccgga tcaccgatcg
     7501 gcccaatacc tggcgccgaa gcatcttcgg caccaccgcc gctgtctgca ccttttacgc
     7561 tctcgcgtcg agtcggattg cgttgggcga cgcggtgacc ctaggcgcaa ccgcgccaat
     7621 cttcgttgcc ttgctctcgg gaccgttgct cgacgagcgg gtcgggacgc acgtcgggct
     7681 ggcggtgctg ctgggcttcg ccggcatagt ggccgtggtg cgcccatcct tcggcggggg
     7741 gatcccggtt gcgctgatag cgacagtggg cgccgccttt tacgccttag cgatgatctg
     7801 gctgcggaag atcggacccg gtgagagcca cgaggcagtg gtcctccact tttcattggt
     7861 cgcttcagtc acgttcctcg ccctgagcat cccggtctgg cgttggcccg gctggcccgg
     7921 cgccggcttt ctcctcggcg ccggccttgc cggaggcgga gcccagatcg cgatgacccg
     7981 cgcgtactcc ctcgcccggg ctgccccggt gacggccatg tcgggactat ccatcgtgtt
     8041 cacctacctt ctcgcgatcc cggtctttgg cgaccagccc accgcctggc aggttacagg
     8101 ttcgttcctg gtcatcgccg cgagcgtgct gctgaccgtc cgaaccgaac cggctctatc
     8161 ctgagtggcg acataccata tccgtgtatg tttgccctat ggcttcgccc gctctcactc
     8221 cgaccccgat tcggccgcac gggctgtgct ttgaccctga tgccgcatgc cggcacctgg
     8281 ccgcggcgga cccgcacctg gatgccctca tgatccgggt cggtgcgttc agcatgcggc
     8341 ccgagcccac ccagagtctg ttcaccgcgc tgctccgttc catcgtctac cagcaactca
     8401 gcggaaaagc cgccgcgact atcctgggac gggtcaaccg gctcttcccg ccccggcgct
     8461 ttcccacgcc aggcgagctc ctcgagatat ccccggagcg gcttcgcgaa gccgggctct
     8521 ccgccgcaaa gacggcggcg gtccgcgacc ttgccgtgcg cacgctcgac ggcaccgtac
     8581 cttcgctcgc gcgtatccgg cgcatggaag acgaagagat catcgagcgg ctgatggtcg
     8641 tgagggggat cggccgctgg accgccgaga tgctgctgat tttccggctg ggccggcccg
     8701 acgtcctgcc gctcagtgac ctcggcgtgc ggaagggctt cgggatgacc tttcgcaccc
     8761 ggagacttcc cgagccctcc gtcatggccc gtcgaggcga gcgctggcgc ccatatcgca
     8821 gcgtcgcgac ctggtatctc tggcgtgcc
//
LOCUS       DASYRV010000300         2481 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2765503, whole genome shotgun sequence.
ACCESSION   DASYRV010000300 DASYRV010000000
VERSION     DASYRV010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2481
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2765503"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            443..1873
                     /locus_tag="VGQ24_07815"
     CDS             443..1873
                     /locus_tag="VGQ24_07815"
                     /inference="COORDINATES: protein motif:HMM:NF017505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008430 - selenium binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenium-binding protein SBP56-related protein"
                     /protein_id="HEV8454781.1"
                     /translation="MATLRPDPTFYPSAKQAAEAPAEELAYLAMLSPNLSRPDAIGVV
                     DVKPGSKSYGRVVGQFDMPNIGDELHHFGWNACSASLCPWAAHPHVERRYLVVPGINS
                     SRIHILDTKSNPRRPELVEVIEPETLAKKTGYASPHTVHCGPDGIYLSALGAPDGGGP
                     GGIFVLDHDSFQPKKAWERDHGPQQLAYDFAWHLGHDTTITSEWGTPSMVRNGLVPEL
                     LLGGKYGNSLHVWDLRKGTHQQKLPLGDQYQMTLELRPARDPRKAYGFVGVVISLEDL
                     SASVWIWYKEGGNGGKGGKGDGNAWKVKKVITIPAEPADPADLPPLLQGFKAVPPLVS
                     DINLSLDDRQLYVSCWGTGELRQYDVSDPFTPRLTATTQIGGIVRRAAHPAKPNQRLN
                     GGPQMVELSRDGRRVYLTNGLYSPWDEQFYPDGLKSWMVKFDTRPEGGMALDSKFFLE
                     MEQGVRCHQVRLQGGDASSDSFCFSS"
     gene            1870..>2481
                     /locus_tag="VGQ24_07820"
     CDS             1870..>2481
                     /locus_tag="VGQ24_07820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454782.1"
                     /translation="MTDPAAMSWPALLALGAGHGINPAMGWLFAVALGLQRESRRAVW
                     AALGPLAVGHAFAIGGAVAAAGLVGLVVPLAVLRWATAGLLVGLGIYRLVRSRHLTFG
                     GMQVGARELAIWSFLMASAHGAGLMVLPLVIASPSAAPVLHHMSAMPLTLTNLEWSRV
                     WATLVHTAGYLLVTGLLAVIVYEKVGVRFLRKAWVNLDLIWAVA"
BASE COUNT          397 a          824 c          819 g          441 t
ORIGIN      
        1 cctcaaccag ataggagatc aggaccagtg cggtgagtaa tccgattccc aggatcgctg
       61 cttcgatcat gagcatcccc cctgtgagct attcacagaa ataaaaaccg ccacccctgt
      121 acttcgcaca gggtttagct cgggatgagg tggaatcgct tccccccgcc tcactcctca
      181 tcccgagcgc cacccgcgcc tagcgcgggc gcgcgagaga cctagcccgc ctgactacga
      241 actcggtggc gattccctat gccagttaag caggtccctc gccagccctc cccttcactc
      301 cgctcagggt cggtaggctc gggatgagga gtgggtgtag cagacgccgc ccgcccgtcc
      361 gcccgtccgc cgtaccgcct tgcgccttcc gggaagtcgc cgtatcgcta gcagaaaccg
      421 attacatccc ggaggaatcc ccatggcaac gctgcgtccc gatcccacgt tctatccttc
      481 cgccaagcag gcggcggagg cccctgccga ggagctcgcc tacctggcga tgctcagccc
      541 caacctgtcc cggcccgacg ccatcggcgt ggtcgacgtg aagccgggct cgaagtccta
      601 cggccgcgtg gttgggcagt tcgatatgcc gaacatcggc gacgagctgc accactttgg
      661 ctggaacgcg tgcagcgcca gcctgtgccc gtgggcggcg cacccgcacg tcgagcgccg
      721 gtatctggtg gtgccgggca tcaactcgtc gcggatccac atcctggaca ccaagtccaa
      781 tccgcgccgg ccggagctgg tcgaggtgat cgagccggag accctggcga agaagaccgg
      841 ctacgcctcg ccccacaccg tccactgcgg tcccgacggc atttacctca gcgcgctcgg
      901 tgccccggat ggcggtggac cggggggcat cttcgtgctc gaccacgaca gcttccagcc
      961 gaagaaagcc tgggagcggg accatgggcc gcagcagctg gcctatgact tcgcctggca
     1021 tctagggcac gacaccacca tcaccagcga gtggggcacc cccagcatgg tgcgcaacgg
     1081 cctggtgccc gagctattgc tgggcggcaa gtatggcaac tcgctccatg tctgggatct
     1141 ccggaagggg actcaccagc agaagcttcc gctgggggac cagtaccaaa tgacgctgga
     1201 gctgcgccca gcccgcgatc cgcggaaggc gtacgggttc gtgggcgtgg tgatctcgct
     1261 ggaggatctg tcggcgtcgg tgtggatttg gtataaggaa ggcggtaacg gcggtaaagg
     1321 cggtaagggt gacgggaacg catggaaggt gaagaaggtg atcaccattc ccgccgagcc
     1381 ggcggatccg gccgatttgc cgccgttgct ccagggattc aaggcggtgc cgccgctggt
     1441 gtccgacatc aacctgtcgc tggatgaccg gcagctctac gtgtcgtgct gggggacggg
     1501 tgagctccgg cagtacgacg tttccgaccc gttcaccccg aggctcaccg ccaccaccca
     1561 gatcggcggc atcgtccgcc gcgctgctca tccggccaag ccgaaccagc ggttgaatgg
     1621 tggcccgcag atggtggagc tgagccggga tggacggcgg gtctacctga ccaacggcct
     1681 ctactcgccg tgggatgagc agttctatcc cgacggcctg aagagctgga tggtgaagtt
     1741 cgatactcgg cccgagggtg ggatggcgct cgactccaaa ttcttcctgg agatggagca
     1801 gggagtccgt tgccaccagg tccggctcca gggcggcgac gcctcgtccg attcgttctg
     1861 cttctcctca tgaccgaccc cgccgcgatg tcctggcccg cgctgctcgc cctcggtgcc
     1921 ggtcacggca tcaaccccgc gatgggatgg ctcttcgccg tggcgctggg actccagcgg
     1981 gagagccgcc gggcggtgtg ggcggcactg ggtccgcttg cggtgggaca cgccttcgcg
     2041 atcggaggcg ccgtcgccgc ggcgggtctg gtcggactcg tggtcccgct cgccgtgctt
     2101 cgctgggcta ccgccggttt gctggtcggc ctcggcatct accggctggt tcgctcgagg
     2161 cacctgacgt tcggcgggat gcaagtgggc gcccgcgagc tcgccatctg gtcgttcctc
     2221 atggcctccg cccacggcgc cggactcatg gtgctgccgc tagtgatcgc ctcgccgagt
     2281 gcggctcccg ttctccacca tatgtcggcg atgcccctga ccctcacgaa cctcgagtgg
     2341 agccgcgttt gggcgacgct ggtgcacacg gcgggctacc tgctggtaac gggactcctc
     2401 gccgtgatcg tgtacgagaa ggtaggcgtg cggtttctcc ggaaggcgtg ggtgaacctg
     2461 gacctgattt gggctgttgc c
//
LOCUS       DASYRV010000301         1598 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2346017, whole genome shotgun sequence.
ACCESSION   DASYRV010000301 DASYRV010000000
VERSION     DASYRV010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1598
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2346017"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..811)
                     /locus_tag="VGQ24_07825"
     CDS             complement(<1..811)
                     /locus_tag="VGQ24_07825"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HEV8454783.1"
                     /translation="MRNSRRVVITGLGVVAPNGIGKETFWQNLIAGKSAIDYITAFDP
                     SAHSCHVAAEVRDFHPPDFMSTRRAKVMTRFSQLAVAAARLAFEDSRIPTTVWQKMAI
                     CFGTSVSGLQVAVDGVQDFLAKGPGVIKSSTALEYPPHAAASYLAIEFGINGPAITVS
                     SNCCTGIDAIAAAAREISSGRVDAAVAGSSDAPLFPIIFDAFCSLGALTKRNDDPTKA
                     SRPYDLLRDGLVLAEGGAALILEEREFALARGASIYAEVLGHNAASEAIGMR"
     gene            928..>1598
                     /locus_tag="VGQ24_07830"
     CDS             928..>1598
                     /locus_tag="VGQ24_07830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454784.1"
                     /translation="MGHFLTRRRLLAALPAGLLLMRGWAHGLERERAELGYQLDLSVL
                     FSFLTFSLTGTVVQEIDRRAGRYRVTMEGKGTAISTKTEATGIVRDGRFKPVESRSVH
                     MFRGRQSTSTTTYDYERQRLELHSVMHTLLLGRRREVDGVVALPPGRHVDDLVSTELN
                     FASNTLERDADGWYHTLVVRRARAENEGPDDVSLDGYRVELVPLRFRPSPDVATGRLT
                     ALVDIT"
BASE COUNT          312 a          499 c          499 g          288 t
ORIGIN      
        1 ttcgcattcc aatcgcttcg cttgcagcgt tgtgcccaag gacctcagcg tagattgatg
       61 cgccgcgggc taacgcaaac tcccgctcct ccaggatcag tgccgctcca ccttcagcga
      121 ggacgaggcc atccctgagc aaatcgtaag gcctagaagc cttcgtgggg tcgtcgttac
      181 gcttggttag cgctcccaga ctacagaagg cgtcgaagat tatcgggaac agtggagcat
      241 cggaactgcc tgcaacggcc gcatccaccc tgcctgagga gatttcgcgg gccgccgcag
      301 cgatcgcgtc tatgccagta cagcagtttg aagagacggt gattgccgga ccgttgatgc
      361 cgaactcaat cgccagatag ctggcggcag catggggagg gtactctagg gcggtcgacg
      421 actttatcac gccgggtccc ttggcaagga aatcctgaac accgtcgacg gcgacctgaa
      481 gtccggagac agaggtgcca aagcaaatcg ccatcttttg ccacacagtc gttggtatcc
      541 gagaatcctc gaacgccagg cgcgcggcag ctaccgccaa ttgggaaaat cgagtcatca
      601 cctttgcgcg ccgggtactc atgaaatcag gcggatggaa atctcgcact tctgcggcca
      661 catggcagga gtgggccgag gggtcgaagg ccgtgatgta gtcgatggcg gacttcccgg
      721 cgatgagatt ctgccagaag gtctccttcc cgattccgtt gggggccact acacccaacc
      781 cagtaattac aacgcgccgg gagttcctca tgaacccgtg ccccctaagg gtgcgtgacg
      841 aaaggtggga tagagcttat aaactagcag gaaatcaatc taaaaccaaa tcccgtggag
      901 tcggcgggtc gggtagaatg ccagcgtatg gggcactttc tgacccgccg ccggctgcta
      961 gccgccctgc cagccggcct gctgctgatg cgcgggtggg ctcacggtct ggagcgcgag
     1021 cgggccgagc tgggctatca gctcgatttg tccgtcctat ttagcttttt gaccttttcc
     1081 ctgaccggca cggtggtcca ggagatcgac cggcgggccg gtcggtaccg ggtgaccatg
     1141 gagggcaagg gcaccgccat cagcaccaag accgaggcta ccggcatcgt ccgggatggg
     1201 cgattcaagc cggtcgagtc tcgaagcgtc cacatgttcc gcggccgcca gagcacctcg
     1261 acgaccacct acgactacga gcgccagcgg ctcgagctcc attcggtcat gcacacgttg
     1321 ctgctcggcc ggcgccgtga ggtggacggc gtcgtggccc tgccacccgg gcgtcacgtg
     1381 gacgatctgg tctcgaccga gctcaacttc gcatccaaca cactcgagcg cgacgcggac
     1441 gggtggtatc acacgctggt cgtccggcgg gcccgcgccg agaacgaagg ccccgacgac
     1501 gtctcgctcg atggttaccg agtcgagctg gtgccgctgc gcttccgccc cagccccgac
     1561 gtggcgacgg gccgcctcac cgcgctggtg gacatcac
//
LOCUS       DASYRV010000302         1586 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1930994, whole genome shotgun sequence.
ACCESSION   DASYRV010000302 DASYRV010000000
VERSION     DASYRV010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1586
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1930994"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..203)
                     /locus_tag="VGQ24_07835"
     CDS             complement(<1..203)
                     /locus_tag="VGQ24_07835"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_process: GO:0009235 - cobalamin metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP:cob(I)alamin adenosyltransferase"
                     /protein_id="HEV8454785.1"
                     /translation="MKIYTKTGDQGQTGLFGGGRTAKDDPRVVAYGEVDELNSALGVA
                     RAAEPGDLFDGELAAIQRDLFALG"
     gene            257..1285
                     /locus_tag="VGQ24_07840"
     CDS             257..1285
                     /locus_tag="VGQ24_07840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEV8454786.1"
                     /translation="MTDPVVDITIIGAGPTGLFGAFYAGMRGASCRLIDALPALGGQL
                     LALYPEKFIFDVAGFPRVLAKDLVKGMAEQALQFGCEVRLGEIVTGLRKIEDGGIGHF
                     LLETDAAVHPTRTLLIAAGIGAFEARKLPAEGVEVWEGRGLDYKVLDPKIFAGRRVLV
                     VGGGDSAFDWVMNLADIAGGVMLIHRRDAFRAHAGTIRQVEKLQRQGKCELRTFCEVK
                     SIHGGERLERVTLLNTKTREEETLPFDAVIPQLGFHSDLGPIKEWGLDTEKADIKVDR
                     LMATNVPGIYAAGDITSYEGKLKLIATGVAEACTAVNQAVHYIDPKRKVNPGHSSELK
                     IFATQQLG"
     gene            complement(1331..>1586)
                     /locus_tag="VGQ24_07845"
     CDS             complement(1331..>1586)
                     /locus_tag="VGQ24_07845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454787.1"
                     /translation="QVRLIREHLQEEAARFSRGDFADPMAIHGHTMPGVAELRQGFRR
                     VSIRFDTIPGGATIRYSTSDPAILAALHRWFEAQRTDHGR"
BASE COUNT          277 a          507 c          539 g          263 t
ORIGIN      
        1 cccagcgcga acagatcccg ctggatcgcg gcgagctcgc cgtcaaacag atctcccggc
       61 tccgcggcac gcgccacgcc gagcgcggag ttgagctcgt cgacctcgcc gtacgcgacg
      121 acgcggggat catccttcgc ggtccgaccg ccgccgaaca ggccggtctg cccctggtcg
      181 ccggtcttcg tgtagatctt catggggggg aagatagtgt tggtgagagc ttacctgctc
      241 catctatatt ttgcgcgtga ctgaccccgt ggtcgacatc accatcatcg gcgctgggcc
      301 gaccgggctc ttcggcgcgt tctacgccgg aatgcgcgga gcgtcctgcc gcctcatcga
      361 tgcgttgccc gccctgggtg ggcagctcct ggcgctctat cccgagaaat tcatcttcga
      421 cgtggcggga tttccccgcg tcctcgcgaa ggatctcgtc aaagggatgg cggagcaggc
      481 gctgcagttc ggctgcgagg tgcgcctcgg cgagatcgtc acgggactgc ggaagatcga
      541 ggacggcggg atcgggcact ttctgctgga gaccgacgcc gccgtccatc ccacccgcac
      601 cctgctgatc gcggccggta tcggggcctt cgaggcgcgc aagctcccgg cggagggcgt
      661 cgaggtctgg gaaggccgcg ggctcgacta caaggtcctc gatcccaaga tctttgccgg
      721 acgccgcgtg ctcgtggtgg gcggcggcga ctcggcgttc gactgggtga tgaacctcgc
      781 ggacatcgcc ggcggagtca tgctgatcca ccggcgcgat gcatttcggg cgcacgccgg
      841 cacgatccgc caggtcgaga agttgcagcg gcagggcaag tgcgagctgc ggaccttttg
      901 cgaggtaaag tccatccatg gcggtgagcg gctcgagcgg gtgacgctgc tcaataccaa
      961 aacccgggaa gaagaaaccc tgcccttcga cgccgtgatc ccgcagctcg gctttcactc
     1021 ggacctcggc ccgatcaagg aatggggcct cgacaccgag aaggccgaca tcaaggtgga
     1081 ccgcctcatg gcgacgaatg tcccgggcat ctatgccgcg ggcgacatca cgtcgtacga
     1141 aggcaagctc aagctgatcg cgaccggagt ggcggaggcc tgcaccgcgg tcaaccaggc
     1201 ggtgcattac atcgatccca agcgcaaagt gaaccccgga cacagctcgg agctcaagat
     1261 cttcgcgacg cagcagttgg gctgaggaca gaagggcagt ggggcggtgt ggcagtgcgg
     1321 cagtaaccgc ctagcggccg tgatcggtgc gctgggcctc gaaccagcgg tgcagcgcgg
     1381 ccagtatggc gggatcgctg gtggaatagc ggatcgtcgc cccgccgggg atcgtgtcaa
     1441 accggatgct aacccgccgg aaaccctggc gcagctccgc gactcccggc atagtgtgtc
     1501 cgtgaattgc cataggatcg gcgaagtctc cgcgggagaa tcgcgcggcc tcctcctgaa
     1561 gatgctcccg gatcagccga acctgc
//
LOCUS       DASYRV010000303        13559 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2766477, whole genome shotgun sequence.
ACCESSION   DASYRV010000303 DASYRV010000000
VERSION     DASYRV010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 13559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13559
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2766477"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(68..478)
                     /locus_tag="VGQ24_07850"
     CDS             complement(68..478)
                     /locus_tag="VGQ24_07850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454788.1"
                     /translation="MTIRRYSPKNGAVNKASMELLRRQIQDEFLPTIQQVPGFRAYYV
                     LNVDNREVITLSFCDTPEGTAESSRCAAEYTLRNPLVYELGRPEVTESEVLTHVEASH
                     EPAGETGDEGRAVAAAIALWLEQSRGMLLTIPEP"
     gene            complement(874..1677)
                     /locus_tag="VGQ24_07855"
     CDS             complement(874..1677)
                     /locus_tag="VGQ24_07855"
                     /inference="COORDINATES: protein motif:HMM:TIGR03971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mycofactocin-coupled SDR family oxidoreductase"
                     /protein_id="HEV8454789.1"
                     /translation="MGEFAGKVAFITGAAHGQGRATALALAREGARIAAFDLARPLSY
                     PGYTMGSRSELDSLAAACAELGSECLGFSGDVRDDTAITAAVDATVSLFGRIDILFNN
                     AGICAYGLAHELTEEAWDTMLDINLKGAWLVARRVIPIMMRQRSGVILNNSSIAGLRG
                     MARLSHYSASKWGLTGLTKSWAIELAPYGIRVNSIHPTGVNTPMNDGLAALEGLTPQE
                     IAERSAGNLLPVPWIEPEDVANAVLYLASDRARYVTGAPLVIDAGLLSR"
     gene            complement(1677..2237)
                     /locus_tag="VGQ24_07860"
     CDS             complement(1677..2237)
                     /locus_tag="VGQ24_07860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454790.1"
                     /translation="MPRIPPLDNDAAPPEARAAAEAHVRNHARMTNMKRTLLHSLPAF
                     RALMEWYPLRDTVQPFLGERLTTLFAHAISAETDCLICSTFFRRMLIQTGDNPDRLKL
                     DERETAVIAFGRALAVSPFKVPQEVYRKLEVHFEPSQIVALTAFGALMVATNVVNNAL
                     DVELDEYLQPYRKGVRESAAAAAKPA"
     gene            complement(2289..2867)
                     /locus_tag="VGQ24_07865"
     CDS             complement(2289..2867)
                     /locus_tag="VGQ24_07865"
                     /inference="COORDINATES: protein motif:HMM:NF013073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEV8454791.1"
                     /translation="MRLIACALPLLAGVPSVLSAQVRVGTTLGPIAVVATLGGHGVTV
                     RATPRGSRHGPAARLPRATSASAARVLATADRYLGTRYRYGGETPAAGFDCSGFVQYV
                     FGRNGIDLPRNSRQQATAGRALAAQVDSLKPGDLMLFSSKGVRIDHVAIYVGNNRMLH
                     SSAGAGKVLYYDLTTARGKWYLKRHVASRRVL"
     gene            complement(2880..5813)
                     /locus_tag="VGQ24_07870"
     CDS             complement(2880..5813)
                     /locus_tag="VGQ24_07870"
                     /inference="COORDINATES: protein motif:HMM:NF024754.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEV8454792.1"
                     /translation="MSSEPTLQQRKAIEAPLGPLLVVAGPGAGKTFCLIGRINHLIGR
                     LELPPRRILAVTFTNKAAEEIGIRLHETRGPCAEDVTRGTLHAICLTILRDFAERCGL
                     RPGFGVADPDYQVRVLRRLRIPAKRCSQALALFSLYQLQGRQLGERGAELFRRYQESL
                     RARNLADFDDLIALTEQLLRTDQRAAAELRGRWDYVLVDEFQDLNPVQYGIVRRLADS
                     HRNLFGVGDDEQSIFSWTGADPRIIRRFREDFGLGEPIVLDHNRRCSVQIFEAARRLI
                     ARNPALFAKRIEATRESSFDVAVHTFEDEETEADWLIGDIQADRTAAGTGWGDYAVLY
                     RYHKMGRYLEERLICAGLPCRLARGQALLDDEVVGWVIASLQVIRCPDDPVLVAALAE
                     RALSPALRQEVRKVSSRDRDLLANLRAFAGSRLKGDAEARRVWRLIYHLENLRGMGRS
                     HQSLSGLVDELLTRPIGAGRNPLEEYHDELSEPSAYPGAGGLAQRLAEALAARTPVWV
                     EPHGGVEIPLLVMLRAAGISTARRLRPGDLPGPHDVVLRAGEGGYGGWPLRLFKALQL
                     LQTRNLKGDFGDFVAFDLETSSFDLGSCEIVEIAAVRVRSNVVVGGFQRLVACAAPIS
                     AAATAVHGYTDEAVAGAPALPEVWAEFREFVGSDILVAHNGQEFDVPVLRRTCQGLEG
                     LEDLVFYDTLPLARSLIDGSVKLIHLAQKFNVEVGRAHRAYDDAFMLAGVVPALNELR
                     LRRSRKVALVHLLDYLGLALALGQSAEPDKEELLFRDITRPYTLGRYSDCLEAYAAEV
                     ATEAAGAPDLEEVIKRLGGAALMERLRAERSPSERYPAAVERLRTLVHASTGHTLAEQ
                     LDEMLYRAALSTSDGVETDPHRINLLTLHSTKGLEFSRVYIVGVEDQQLPGWKAIQNE
                     LEEEIQEARRLLYVGMTRAKDRLVLTRAERRSGIHCGGSLFLIESGLGPALAGTAPAL
                     GDPVV"
     gene            complement(5810..6493)
                     /locus_tag="VGQ24_07875"
     CDS             complement(5810..6493)
                     /locus_tag="VGQ24_07875"
                     /inference="COORDINATES: protein motif:HMM:NF042734.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta family hydrolase"
                     /protein_id="HEV8454793.1"
                     /translation="MDIRLVVSDQIGSVSAILRRPPDAWLLFVLAHGAGAGMRHRFLE
                     SISGTLAERGIATLRYQFPYVEAGRKRPDYPSALEATVRAAAAKAAELAPELPVIAGG
                     KSLGGRMTSGAAAAAPLAGVRGLVFLGFPLHPPGQPGTSRADHLDRVDLPMLFLQGTR
                     DNFARLDLITDVCEELDPNATLHVVEGGDHSFAVLKRSGRTQSEVLGELVDTTVEWAR
                     SQVLGRVGA"
     gene            complement(6554..9112)
                     /gene="ligD"
                     /locus_tag="VGQ24_07880"
     CDS             complement(6554..9112)
                     /gene="ligD"
                     /locus_tag="VGQ24_07880"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase D"
                     /protein_id="HEV8454794.1"
                     /translation="MPHDKPDPLAPYRAKRALERTPEPAGSLTTGSADAGGLFVVHKH
                     AARRLHFDLRLEMDGVLRSWAVPKGPSYDTADKRLAVHVEDHPLEYGDFEGLIPEGNY
                     GAGAVIVWDRGQWLPVGDPAEGLAKGKLLFELRGLKLHGMWTLVKLKKGEKEWLLIKE
                     RDGYASSGGEPPPEESVLSGLTVEDLKAGRTPAGGILSDLERLGAPKKAVQPEAVQLM
                     LAEARDDAFTAAGWLFELKLDGYRVLGARDGAARLLSRNGNDLSSCFPEVIRVLTALP
                     FDRLVLDGEIVALDEAGRPSFQRLQQRARLRRGLDIRHAMVENPVTYFAFDLLGVDDF
                     DLRPLPLSTRKALLQKLLPPAGVIRFLDHFETEGEVLYEQVQKLGLEGIVAKRAESPY
                     RAGRSATWLKIRTRRSDDFVVVGFTAPKGSRSGFGSLQVALYVEGKLTYAGRAGSGFT
                     DTQLTQVRRELETSRRADPGCIGPIPQDKGIIWVEPRLVCEVEFTEWTDEGLLRQPVF
                     LRFREDKKPEECVGSGAPGQQGSGAVDGIAELPSEGDEEPVLSRGPAAPPPRLDFTNV
                     KKIFWPDDGYTKGDLIDYYRTISPWMLPYLADRPVVLTRYPDGIAGKSFFQKDAPGFV
                     PDWIRTERMWSEQAERDIDYFVCDDEASLLYLINMGTIPLHIWASRTAKIDRPDWCVL
                     DLDPKDAPFSDVIKVARTMHALCEEIGLPNLVKTSGSSGLHVLIPLGCQCRYDEARSL
                     GELLARLVTAELPEISTVTRQVSRRGGKVYIDYLQIGAGRLIVAPFSVRPLPGAPVSM
                     PLRWSEVKDGLDIRSFTIKTAPARMQKLKRDPLREVLEEEPDLAGALERLAKWG"
     gene            9287..10159
                     /locus_tag="VGQ24_07885"
     CDS             9287..10159
                     /locus_tag="VGQ24_07885"
                     /inference="COORDINATES: protein motif:HMM:TIGR02772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HEV8454795.1"
                     /translation="MPPRSIATANISFGLVSVPVQLYSASESSATISFNMLHKACGTR
                     LKQQYICPKDGGVVEKDDIAKGYEFAKGQYVLFSPEEIKALDEKATNSIDIAEFVPLT
                     AVDRIYLEKVYYLGPDKGGDRAYRLLGEALKETGRAALGQYSARGKQHLVLVRPLDGV
                     LVMEQLHYAAELRPASEVPHPDTPVKEAELALARQLIAQSATDEFRPENYHDTVRERV
                     LEAIQDKVEGQEITAEAAPKETKIIDLMDALKASLARKGTSTDEKRPAKRVGGNVDEA
                     DEAPPKKRRAGGRS"
     gene            10528..11364
                     /locus_tag="VGQ24_07890"
     CDS             10528..11364
                     /locus_tag="VGQ24_07890"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEV8454796.1"
                     /translation="MESYTTRDVARLLGLSEAQVRSQARAGFLTPDRGPRNSYRFSFQ
                     DLVLLRTARELAGARVPPRRIKGALCKLARDLPSGRSLSELRLTAEAHRVIVLEGGSA
                     WNPESEQLQIDFDVAELAGRTAPVARRLARSPQRASRPLGATEWFDLGADLEEAAPDE
                     ARNAYARALALDPNHPDAHVNLGRLLQLEGRTGEAIEHYRWSLRADSTDPTAAFNLGT
                     ALETLGRWAEAIETYRHALELDREFADAHFNLARLYEQAGRRAVALRHLSAYQQLSRS
                     RV"
     gene            11378..12094
                     /locus_tag="VGQ24_07895"
     CDS             11378..12094
                     /locus_tag="VGQ24_07895"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEV8454797.1"
                     /translation="MKILVGTSGWSYKEWKGSFYPDKLPQDEMLGFYASRFHTVEVNN
                     SFYRIPSEKVLAGWAEQVPPDFRFVLKASRRITHNSRLADEDGSLEYFLRAVNPLGER
                     RGATLFQLPPTFKKDAARLRDFLARLPKRWMAALEFRHASWFDDEVYDLLRSHDVALV
                     AVDEDETEGMGAPLVPTASWGYFRLRRSAYDTNALEAWAGRIQRAEWKEAYVFLKHED
                     GSPRGPAAAEALERILRSSG"
     gene            12185..12532
                     /locus_tag="VGQ24_07900"
     CDS             12185..12532
                     /locus_tag="VGQ24_07900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454798.1"
                     /translation="MATNRSWDEEDSWWRNNFSSRPYATGRDYEEFRPAYQYGYESGL
                     HHMGRQWSDVETDLRTGWEKFEGRRGAGSTWDNVKHAVRDAWHRITGQQDLDAARMSE
                     SEIDRISQGGRTS"
     gene            12825..13319
                     /locus_tag="VGQ24_07905"
     CDS             12825..13319
                     /locus_tag="VGQ24_07905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454799.1"
                     /translation="MTMANTETRGFQDEVTGQESGGGAREQIREVKNQVVDQAKHTVQ
                     QARERASSSLGESKLQFADQLGTAAEALRRTTQHLRSEDQSRIAGLTETVARQLDQVS
                     NYLRNNDAAAMRHDLENAARRQPAIAIGGAIVLGLIGARFLKSSERRRERRLSGVGGG
                     HARA"
     gene            13306..>13559
                     /locus_tag="VGQ24_07910"
     CDS             13306..>13559
                     /locus_tag="VGQ24_07910"
                     /inference="COORDINATES: protein motif:HMM:NF018980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HEV8454800.1"
                     /translation="MPELRQERSIGELFGQLSQDMTMLVRQEVQLARAEMSEKLSRLT
                     TNLVSVIAGGFVAYVGALALVAALILGLNDLANISPWVSAL"
BASE COUNT         2456 a         4441 c         4404 g         2258 t
ORIGIN      
        1 gagagatgga aaaagtaagg gccggcgtca aggccagccc ccggggattg gtcaaatatc
       61 ggatctgtca cggctccggt atggttagaa gcataccccg tgactgctcc agccacaagg
      121 cgatcgccgc cgcaaccgca cgcccctcgt cgcccgtttc cccagccggc tcgtgcgatg
      181 cctccacgtg ggtgagcacc tcggactcgg tcacctccgg ccggcccaac tcgtagacga
      241 gtggattgcg gagagtgtac tcggcggcgc agcggctgga ctccgctgtc ccctccgggg
      301 tgtcgcagaa gctcagcgtg atcacttccc gattgtccac gttcagcacg tagtaggccc
      361 ggaaacccgg gacctgttgg atagtgggaa gaaactcgtc ctgaatctgg cggcgtagaa
      421 gctccatcga ggccttgttc accgccccgt tcttcggact gtaccgtctg atcgtcacga
      481 acatatctgc ctctgaccac ctcgaacccg ccgggactcg agggtatgac ccaatttcaa
      541 ggaactactg caggagggaa cataacccgg aggccaaact tcagcaccct cagtgctcag
      601 cgggatcaac tgaccgccct tccccaccca gcggactgga cgagcccctc cggcttcgag
      661 tgccagactt ccccccacac caccccttac actcagccgt cggggctcac ccagttccgc
      721 tgcttcccca cccggaggga gcggggagca gacggctcgg gtatgggttc gaaggcaggc
      781 tcccagggga cgggtggagc ggttgtcatg gagcctgccg gagagcccac gcccgagccg
      841 tctgcgcggc agggcggggc gaaccagtgg acgtcagcga ctgagaagcc ccgcgtctat
      901 caccagcggc gcgccggtca cgtaccgcgc ccggtcggac gcgagataga gcacggcatt
      961 cgcaacgtcc tcgggctcga tccaggggac cggcagcaga ttacccgccg agcgctcggc
     1021 gatttcctgc ggggtcaaac cctccaacgc agccaggccg tcgttcatcg gggtgttcac
     1081 cccggtcggg tggatcgagt tgacccggat cccgtaggga gccagctcga tggcccacga
     1141 cttggtcagc cctgtgagcc cccacttcga ggccgagtag tggctgaggc gggccatacc
     1201 gcggagaccg gcgatggacg aattgttgag aatcacgccg gagcgttgcc gcatcatgat
     1261 cgggatcacc cggcgggcca ccagccaggc acccttcagg ttgatatcga gcatcgtatc
     1321 ccaggcctct tcggtcagct cgtgcgccag gccgtaggca cagatgcccg cgttgttgaa
     1381 gaggatatcg attcgtccga aaagcgagac cgtcgcgtcc actgcggccg tgatggcggt
     1441 gtcgtcccgc acgtcaccgc tgaagccgag acattcgctt ccgagctccg cgcatgcggc
     1501 cgcaagcgag tccagctcgc tgcgggagcc catcgtgtag ccggggtagc tcagcggtcg
     1561 tgccaggtcg aatgccgcga tgcgggcgcc ttcccgggcg agcgccagag cggtggccct
     1621 gccctgcccg tgtgcagcgc cggtgatgaa cgccaccttg cccgcgaact cgcccatcag
     1681 gcgggcttgg cggcggccgc ggcgctctcc cgcaccccct tgcgataggg ctggaggtac
     1741 tcgtccagtt ccacgtcgag ggcgttgttg accacattgg tggccaccat cagcgcgccg
     1801 aacgcagtca gcgctacaat ctgggacggc tcgaagtgca cctcgagttt ccggtatacc
     1861 tcctggggca ccttgaaggg cgagacggcc aacgcgcggc cgaacgctat cacggccgtc
     1921 tcccgctcgt ccagcttcag gcgatccggg ttgtctcccg tctggatcag catccgccgg
     1981 aagaaggtcg agcagattaa gcaatcggtt tccgctgaga tcgcgtgagc gaacaacgtg
     2041 gtgagccgct caccgagaaa gggctggacc gtgtcgcgca gcgggtacca ctccatgaga
     2101 gcgcggaagg cggggagcga gtgaagcagc gtccgcttca tgttggtcat gcgagcgtga
     2161 ttccggacgt gggcttccgc cgcggccctg gcctcgggcg gcgcggcgtc gttgtcgagg
     2221 ggcggaatcc ggggcatagc tggagggctc cgtgcgagtg ggcggcgatc gaggcaatct
     2281 agagtccctc aaaggacacg tcgagaggcc acgtggcgct tgaggtacca cttcccgcgc
     2341 gcggtcgtga gatcgtagta caggaccttg cctgcccccg cgctcgagtg aagcattcga
     2401 ttgttaccca cgtagatcgc tacgtgatcg atgcgcacgc ccttgctgga aaacaacatc
     2461 agatcgccgg gcttcaggga gtcgacctgg gcggccaaag cccgtccggc ggtggcttgc
     2521 tggcgagaat tgcgaggaag atcgatgccg ttccggccga agacatactg cacgaagccg
     2581 gagcagtcga acccagcagc gggggtctcg ccgccgtagc gatagcgggt acccagatac
     2641 cggtcggccg tggcgaggac gcgggcggca ctggcactgg ttgcccgggg cagacgcgcg
     2701 gcgggaccgt ggcgggagcc ccgcggtgta gcacggacgg ttaccccgtg tccaccgaga
     2761 gtggcgacta cagcaatggg accgagggtg gttcctactc taacctgcgc cgacagcacg
     2821 ctcgggaccc ccgccaggag cggcagggcg caagcgatca atctcatgga cacctactgt
     2881 tagacgaccg ggtcccccag cgcaggagcc gtgccagcga gggcgggtcc aagcccagac
     2941 tcgatcagga acagactccc gccacaatga atccctgatc tccgctcggc cctggtcagc
     3001 accagccggt ccttcgcccg ggtcattccc acatacagca ggcgccgagc ctcctggatc
     3061 tcctcctcaa gctcattctg aatcgccttc catccgggaa gctgctgatc ctcaacgccg
     3121 acgatgtaga ctcgggagaa ctcgagaccc ttggtcgagt gcagtgtgag caggttgatc
     3181 cggtgaggat cggtctccac gccatcgctg gtcgagagag ccgcccggta gagcatctcg
     3241 tcgagttgct cggcgagggt gtgtccggtg ctggcgtgca ccagggtgcg aaggcgttcg
     3301 accgcagcgg ggtatcgctc cgaaggagag cgttcggcgc ggagccgttc catgagcgcg
     3361 gcaccgccga gtcgcttgat gacttcctcg agatccggag cgccagcagc ctctgtggcc
     3421 acttctgccg cgtatgcttc caggcagtcg ctgtagcgtc ccagcgtgta gggccgggtg
     3481 atgtcccgaa acagcagctc ttccttgtcg ggctccgcgc tctgtcccag tgccagcgcg
     3541 aggcccagat aatcgagcag gtgcactagc gcgaccttgc gggatcggcg cagcctcagc
     3601 tcgttgagcg ccggcactac gcctgccagc atgaacgcgt cgtcgtacgc gcggtgggct
     3661 cgcccaacct ccacgttgaa cttctgggcc aggtgaatca gcttgacgct cccgtcgatc
     3721 agcgagcgcg ccagcggcag cgtgtcatag aagaccaggt cttcgagccc ctcgagacct
     3781 tggcaggtgc gccggagcac cggcacgtcg aactcctggc cgttgtgcgc cacgaggatg
     3841 tcggacccga cgaactcgcg gaactcggcc cacacttccg gcagtgcggg tgccccggcc
     3901 accgcctcgt cggtgtagcc gtgcaccgcg gtcgcggcag ccgagatcgg cgcggcgcag
     3961 gccaccagcc tctggaaacc tcctacgacc acgttcgatc gcacccgtac ggcggcgatc
     4021 tccacgatct cgcacgagcc cagatcgaag ctgctcgtct cgaggtcgaa ggcgacgaag
     4081 tcgccgaaat cacctttcag gttgcgggtc tgcagcagct gcagcgcctt gaacagccgg
     4141 agcggccagc cgccataccc gccttccccc gcccggagta cgacgtcatg ggggccaggt
     4201 agatcaccgg ggcgcagccg gcgcgcggtg gatatcccgg cggcccgaag cattaccagc
     4261 aggggaattt cgacaccgcc atgcggctcg acccacactg gcgtgcgcgc agcgagtgcc
     4321 tccgccaatc gttgtgcgag cccaccggct ccggggtagg ccgatggctc gctcagctcg
     4381 tcgtggtact cttcgagggg attgcggccg gcgccgatcg gacgggtgag aagctcatcc
     4441 accaaccccg agagcgactg atgcgaccgg cccatgcccc tcaggttctc cagatggtag
     4501 atcaaccgcc acacccgtct cgcctcggcg tcacccttca gcctgctccc ggcgaaggcc
     4561 ctgaggttgg caagcaagtc gcggtcccgg gaggagacct tgcgcacttc ctggcgcagg
     4621 gctggtgaca acgcacgctc ggcgagcgct gcgacgagga cggggtcgtc gggacagcgg
     4681 atcacctgca aggaagcgat cacccagccc accacctcat cgtcgagcag ggcctgtcct
     4741 cgagccaacc ggcatggaag gccggcgcag atcagccgct cttccagata ccgccccatc
     4801 ttgtggtagc gatacaggac cgcgtagtcg ccccagcccg ttcctgccgc ggtgcgatcg
     4861 gcctgaatgt cgccgatcag ccagtcggct tctgtctcct cgtcctcgaa cgtgtgcacg
     4921 gcgacgtcga agctggactc ccgggtggcc tcgatccgct tggcgaacag cgccggattc
     4981 ctggcgatca aacgccgggc ggcctcgaag atctggaccg agcaccgccg gttgtgatcg
     5041 agcacgatcg gctcgcccag gccgaagtct tcccggaagc ggcggatgat acggggatcg
     5101 gccccggtcc aggaaaagat cgattgctcg tcgtcgccca caccgaacag gttgcgatgg
     5161 ctgtccgcca gccgccggac gatcccgtac tgcaccggat tgagatcctg gaactcgtcc
     5221 accagcacat aatcccaacg gccgcgcagc tccgccgcgg cgcgctggtc ggtgcgaagc
     5281 agctgctcgg tcagcgcaat gagatcgtcg aagtcagcca ggttgcgagc ccgcagcgat
     5341 tcctgatacc gccggaagag ctcggccccg cgctcgccga gctgccgccc ttgcagctgg
     5401 tagaggctga agagagcaag cgcctgggag caccgctttg ccggtatccg gagccgccgc
     5461 agcacgcgaa cttgatagtc cgggtccgcg acgccaaagc ccggacgaag tccgcatcgc
     5521 tcggcaaagt cgcgcaggat cgtcaggcag atcgcgtgca gggtgccgcg ggtgacgtcc
     5581 tcagcacatg gaccgcgcgt ctcgtgcagc cggatgccga tctcttccgc cgccttgttg
     5641 gtgaaggtca ccgcgagtat ccggcgcggg gggagctcca gacgaccgat gagatgattg
     5701 atccgaccga tcaggcagaa ggtcttccct gcccccggtc cagccaccac gagcagagga
     5761 ccaagcgggg cctcgatggc cttgcgttgc tggagggtgg gctcggagct catgcgccca
     5821 cccggccgag cacctgagac cgggcccatt ccaccgtggt gtcgaccaac tctcccagaa
     5881 cctcagactg ggtgcggccg gagcgcttga gcacggcgaa ggagtggtcg ccgccctcca
     5941 ccacatgcag ggtcgcgttg ggatcgagct cttcgcacac gtcggtgatc aggtcgagcc
     6001 gggcaaagtt gtctcgggtt ccctggagga acagcattgg tagatccacc cggtcgaggt
     6061 ggtcggcccg gctggtgccc ggttggcccg gcggatggag cgggaagccg aggaagacca
     6121 gacccctcac gccggcgagc ggcgcagccg ccgcggcgcc cgacgtcatc cggccaccga
     6181 gcgatttacc cccggcgatc acgggcagct ccggtgcgag ctctgcggct tttgcggccg
     6241 ctgcccgcac cgttgcttcg agggccgagg gataatcggg acgcttacgg ccggcctcga
     6301 cgtaggggaa ctgatatctg agggtcgcta tgccgcgctc ggccagcgtt cccgagatcg
     6361 actcgagaaa gcggtggcgc ataccggctc ctgccccatg tgccagcacg aagagcagcc
     6421 aggcatccgg cggccgcctc aggatagcgg agaccgagcc gatctggtca gagacgacta
     6481 gtcggatatc catgaatgtc attccgatgg agccacttcg gctgcgctca ggcaggctac
     6541 gcgacggagg aatctacccc cactttgcca accgctccaa tgcgccggct agatccggct
     6601 cctcctccag tacttccctg agcgggtccc gcttgagctt ttgcatgcgc gccggtgccg
     6661 tcttgatggt gaaggaccgg atgtcgagcc cgtccttcac ctcgctccac cggagcggca
     6721 tggacaccgg cgcgccggga agggggcgga cgctgaaggg cgccacaatc agacgacccg
     6781 cgccgatctg gagatagtcg atgtagacct ttccgccccg gcgtgagacc tgcctggtta
     6841 cggtcgagat ttccggcagc tcggcggtga ccaggcgggc cagaagctct ccgaggctcc
     6901 gcgcctcgtc gtaacggcac tggcagccga ggggaatcag cacgtggaga cctgacgagc
     6961 cgctggtttt caccagatta ggcaggccga tctcttcgca aagggcatgc atggtccgag
     7021 cgactttgat gacgtcggag aacggagcgt ccttgggatc cagatccagg acgcaccaat
     7081 ccggccggtc gatctttgcg gtgcggctgg cccagatgtg gagcgggatc gtccccatgt
     7141 tgatcaggta gagcagcgaa gcctcatcat cacacacgaa gtaatcgata tctcgctccg
     7201 cctgctcact ccacattcgt tcggtgcgaa tccagtcggg gacgaaaccc ggtgcatcct
     7261 tctggaaaaa ggatttaccc gcgatcccgt cggggtaccg ggtgagcacc accggtcggt
     7321 cggccagata gggaagcatc cagggcgaga ttgtgcggta ataatcgatc aggtcgccct
     7381 tggtgtaacc gtcgtcgggc cagaaaatct tcttcacgtt cgtgaagtcg aggcggggcg
     7441 gcggggccgc agggccgcgg gacaacaccg gttcctcatc cccttcactt ggtagttcag
     7501 caatcccatc tactgccccg ctgccctgct gccccggcgc cccgctgccc acacactcct
     7561 ccggcttctt gtcttcccgg aaccgcagga acaccggctg ccggagcaat ccctcgtcgg
     7621 tccactcggt gaattccacc tcacagacca gccgaggctc tacccaaatg attcccttat
     7681 cctgcggaat cggtccgatg catccgggat cagccctgcg ggaggtctcc agctcccgac
     7741 ggacctgcgt cagctgcgtg tcggtgaagc cgctgcccgc tcgccccgcg taggtgagct
     7801 tgccctcgac gtagagtgca acctgcagcg acccgaaacc gctccgggag cccttgggcg
     7861 cggtgaatcc gacgaccacg aaatcgtccg acctgcgggt ccggatcttg agccacgtcg
     7921 cggagcggcc cgcgcgatac ggtgactctg cccgcttggc gacaatgccc tccagaccga
     7981 gcttttgcac ctgctcgtac agcacttcgc cttcggtctc gaagtgatcg agaaagcgga
     8041 tgactccggc cggtggcagc agcttctgga gcagagcctt gcgtgtcgaa agcggcagcg
     8101 gccgcaggtc gaagtcatcc acgccgagca gatcgaaggc gaagtaggtg acggggtttt
     8161 cgaccatcgc gtggcggatg tcgagcccgc ggcggaggcg agcccgctgc tggagtcgct
     8221 gaaagctggg acgtccggct tcatcgaggg ccacgatctc cccgtccagc accagccggt
     8281 cgaacgggag cgccgtcagc acccggatga cctctggaaa gcagctcgag agatcgttgc
     8341 cgttccgcga gagcagacgg gccgccccat cccgtgcccc cagcaccctg taaccgtcca
     8401 gcttgagctc gaaaagccaa cccgctgccg tgaaggcgtc gtctctcgcc tcagcgagca
     8461 ttagctgcac cgcctcgggc tgcaccgctt tcttcggggc accgagccgt tccagatccg
     8521 acaggatgcc cccggccggc gtccggcccg ccttgaggtc ttctactgtg aggccggaga
     8581 gcaccgactc ctcgggcggc ggctcaccgc cggaggatgc gtagccgtcg cgctccttga
     8641 ttaggagcca ctccttctcg cccttcttga gcttcaccag cgtccacatc ccgtggagct
     8701 tgagcccgcg gagctcgaaa agcagcttgc ccttcgccag tccctcggcc ggatcgccca
     8761 ccggcagcca ctgtccccgg tcccacacaa tcaccgcccc ggcgccgtag ttcccctccg
     8821 ggatgaggcc ctcgaagtcg ccgtactcga gcggatggtc ttccacatga acggcgaggc
     8881 gtttatcagc cgtatcgtac gaggggccct tgggaaccgc ccaggagcgc agcaccccgt
     8941 ccatctccaa ccggaggtcg aagtgcagac gacgggcggc gtgcttgtgg accacgaaca
     9001 gtccaccagc gtctgctgag cccgtggtca gggatccagc cggttccgga gtgcgctcga
     9061 gcgcgcgctt agcccggtac ggggcaaggg gatcgggttt gtcgtgcggc atagtgagga
     9121 atttacttca ctctcggaat gacagaccaa tcgcctgatg catgaggcat cggcactaca
     9181 cgccccgatg cgtgatttca agcaactgtc tgggctgcaa ctacttcggt aggctggaac
     9241 ggcgtctctt cttgcgggcg ccggttttgc ggcgtatatc gattccatgc ctcccagatc
     9301 aatcgcaacc gcgaacatct cgttcggact ggtgtccgtc ccggtccagc tctattcggc
     9361 gagcgagtcc tccgccacga tcagcttcaa catgctgcat aaggcgtgcg gcacccgtct
     9421 caagcagcag tacatctgtc ccaaggacgg cggtgtggtg gagaaggacg acatcgccaa
     9481 gggatatgag ttcgccaagg gccagtacgt cctcttctcc ccggaggaga tcaaggcgct
     9541 ggacgaaaag gcgaccaact ccatcgacat tgccgagttt gttcccctga ctgcggtgga
     9601 ccgcatctac ctcgagaagg tgtactacct cgggcccgac aagggtggcg atcgagccta
     9661 ccgcctgctc ggcgaggcgc tcaaggagac tgggcgcgcg gcgctggggc agtactccgc
     9721 ccgcggcaag cagcacctgg ttctggttcg tcctctcgat ggcgtgctgg tgatggagca
     9781 gcttcactat gccgccgagc ttcgccccgc gtcggaggtg ccccacccgg acacgccggt
     9841 gaaagaggcc gagctggctc tggcgcggca gctgatcgct cagtcggcca ccgatgagtt
     9901 ccggcccgag aactatcacg acacggtgcg cgagcgcgtg ctcgaggcca tccaggacaa
     9961 agtcgagggc caggagatca cggccgaggc cgctccgaaa gagaccaaga tcatcgatct
    10021 gatggacgcc ttgaaggcga gcttggccag gaagggtacc agcacggacg aaaagaggcc
    10081 tgccaagcgc gtgggcggga acgttgatga agctgatgag gcgccaccga agaagcggag
    10141 ggcgggcggt aggagctaaa gccccttgac cgccacttcc ccaaccagcg gaatggacga
    10201 gcccctccgg cttcgagtgt cagacttccc cccacaccac cccctacact ccgccttcgg
    10261 ggctcgctca gttccgctgg tttccccacc cacgcggaga gggagcagac gacacgggcg
    10321 tggttcgacg gcaggcgccc agggaagggt agtcagcggc aatggggtga gccccggagg
    10381 ctgagcgcaa ggggtgcggt gggggaagtc ggcgcttgaa gccggagggg cttaccctat
    10441 cgccgctgcc gggcggggtg gcttcactcg aagggatgtg attccctcag ggtgacacgg
    10501 cgtggatatc tcatacattt gaagttcatg gagtcctaca ccacccgcga cgtcgccagg
    10561 ctcctgggcc tgtccgaagc gcaggttcga tcccaggccc gggccgggtt tctcaccccc
    10621 gaccgcggcc cccgcaactc ctaccgattc tcctttcagg acctcgttct cctcaggacc
    10681 gcccgcgagc tcgccggcgc acgagtgcca ccgcgccgga tcaagggtgc tctctgcaag
    10741 ctcgcgcggg acctgcccag tggccgttcg ctgagcgagc tgcgcctcac cgccgaggct
    10801 caccgggtca tcgtgctcga agggggaagt gcctggaacc ccgagtccga gcagctccag
    10861 atcgacttcg acgtggcaga gctggccggc cggaccgccc cggtggctcg acgccttgcg
    10921 cgctcgcctc agcgagcgag ccggccgctc ggcgccacag aatggtttga cctcggagcc
    10981 gacctggagg aagctgcgcc cgacgaggcc cgaaatgcct atgcccgcgc cctggcattg
    11041 gatcccaatc atccggacgc gcatgtgaac ctcggccgcc tgctccagct cgagggaaga
    11101 accggagagg ccatcgagca ctaccgctgg tcgctccggg ccgacagcac cgatccgact
    11161 gccgcgttca acctgggaac cgccctggag acactgggcc ggtgggccga ggcgatcgag
    11221 acgtaccgac acgcgctgga gctggatcgc gagttcgccg acgcccactt caatctggct
    11281 cggctctacg agcaagccgg ccggcgggcg gtggcgcttc gacaccttag tgcgtatcag
    11341 caactgagta ggtctagggt ctagagtcgt ctgatccatg aaaatcttag taggcaccag
    11401 cggctggtcg tacaaggaat ggaagggaag cttctaccca gacaagctgc cgcaggatga
    11461 gatgctcggc ttctacgcct cgcggttcca caccgtcgag gtcaacaact cgttctaccg
    11521 gatcccgtcc gaaaaggtgc tcgcgggctg ggccgagcag gtcccacccg acttccgctt
    11581 tgtcctcaag gcctcccgaa ggatcacgca caacagtcgc ttggccgacg aagacggctc
    11641 actggagtac ttcctccgag cggtcaatcc gctgggcgag cgtcgcggcg ccacgctgtt
    11701 ccagctgccg ccgacgttca agaaggatgc ggcgcgcctg cgtgacttcc tggcccgctt
    11761 gccgaagcgg tggatggccg ctctcgagtt ccgccatgct tcctggttcg atgacgaggt
    11821 ttacgatctg ctccggtccc acgacgtcgc actggtggcg gtcgatgagg acgagaccga
    11881 gggcatgggt gcaccgctgg tgcctactgc atcctggggg tatttccggc ttcgtcggtc
    11941 ggcctacgac accaacgcgc tggaggcctg ggccggccgg atccagcgcg ccgagtggaa
    12001 agaggcgtac gtctttctca agcatgagga tggcagccct cgaggtcccg ccgccgcgga
    12061 agccctggaa cggatcctga gaagttccgg atgaggtgat gaggatcacg accccgccgc
    12121 aaacccgtgg ctactgtacg gatcccctcg ggaatcgcga tacctgaagc cacggaggga
    12181 aaccatggca accaatagaa gctgggacga agaggacagc tggtggcgca acaacttcag
    12241 ctcgaggcca tacgctaccg ggcgcgacta cgaagagttt cgcccggcat accagtacgg
    12301 gtatgaatcg gggctgcatc acatggggcg gcagtggagt gatgtggaga ccgatctccg
    12361 gaccggctgg gagaagttcg agggccggcg tggagcgggc tccacgtggg acaatgtgaa
    12421 gcacgcagtt cgcgacgcct ggcaccggat caccgggcag caggatctag acgcggctcg
    12481 catgagcgag tcggagatcg atcggatctc gcagggcggt cgcaccagct agtccaggca
    12541 gtaccccgct ccggggccaa cgttgaagcg gctggggcct agggtcgaag gcgactctag
    12601 gctccagtct ttcttcgcct tagcccgaat aacccagagc caatttcgtg atctggaaca
    12661 cggcgtcatc cgggcaccga ctgtcttttg taccgtgcgc tgaggacatg tcgcgggcat
    12721 ttgccgaacc gatcaagagg tatcggaatt tctgagatcg ctccgcgctg ccggtcaggc
    12781 ggtcctgatg tgatggtgcg aacggtcagc aaaaggagtt tacgatgacg atggcaaaca
    12841 cggagacccg tggattccag gacgaggtca ccggccaaga gagtggcggt ggcgcgcggg
    12901 agcaaattcg ggaagtgaaa aaccaggtgg tagatcaggc caaacatacc gtccagcagg
    12961 ccagagagcg ggccagctcg agcctggggg agagcaagct tcagttcgct gatcagctcg
    13021 ggaccgcggc cgaggccctg cggcgcacca cccagcatct gcgctccgag gaccagtccc
    13081 gtatcgccgg tctcaccgag actgtcgccc gacagctcga ccaagtatcc aactacctcc
    13141 ggaacaacga tgcggccgct atgcgacacg atctggagaa tgccgcccgc cggcagccgg
    13201 ccattgcgat cggcggcgca atcgtgctgg gcctgatcgg tgcccgcttt ctgaagagct
    13261 ccgagcggcg ccgggagaga cggttgagcg gcgtgggagg cggtcatgcc cgagcttagg
    13321 caggagcgaa gcatcggcga gctgttcggg cagctcagcc aggatatgac gatgctggtg
    13381 aggcaggagg ttcagctcgc ccgggcggaa atgagcgaga agctctcccg gctcaccacg
    13441 aacctggtgt cggtcattgc cggggggttc gtcgcctacg tcggcgcgct tgccctcgtg
    13501 gcagccctga ttctgggtct caacgacctg gcaaacattt cgccgtgggt ctccgcact
//
LOCUS       DASYRV010000304         1567 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_4061988, whole genome shotgun sequence.
ACCESSION   DASYRV010000304 DASYRV010000000
VERSION     DASYRV010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4061988"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..445
                     /locus_tag="VGQ24_07915"
     CDS             <1..445
                     /locus_tag="VGQ24_07915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454801.1"
                     /translation="RAWAVDDYKLAVAPDLPQNVREADERAVRARAMIDAFIEQERVD
                     APPEPPARLWPDPEELLEPLSDLDLRAAGISSVIWATGFRYKFDWIEADIFEADGEPR
                     HLRGITPAPGLYFLGLRWLYKFKSSFIHGVDEDAQYLAQHIAERA"
     gene            complement(442..>1567)
                     /locus_tag="VGQ24_07920"
     CDS             complement(442..>1567)
                     /locus_tag="VGQ24_07920"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEV8454802.1"
                     /translation="MDPLELRLKNILRNGDKVPSGAILRNSGLVECIERTQAWVARHS
                     ENGKNQGLGVALGTWAYGPKAGTSESAVTVKIDVDGSVVVLTGAADQGGGQWSLVAQI
                     ASQVLGVPMDQVTVVAADTESTPIEGGIGGSNATYRVGNSVRQAAEDARDKLLLFASE
                     RLKVDPEELQIQDGELIVRSDPSQHLSIAEAAHAATTSAAGAIIGTSAVVREREVQLH
                     GKEQTEIVDAPSTSCVAAQVEVDPETGAVKVLRYFSAQDVGRAINPLACLGQLEGGVV
                     FGLGYALTEEIRTEGGTPTNANLWEYLLTTAPHVPELDIELVEVPSTYGPFGAKGVGE
                     TPCVPVAAAIANAIEDAVGARVTEAPFTPERVLAAIAAKG"
BASE COUNT          240 a          522 c          513 g          292 t
ORIGIN      
        1 gcgggcatgg gcggtcgacg actacaagct ggccgtagct cctgacctgc cccagaacgt
       61 acgcgaggcc gacgagcgcg cggtccgggc tcgggcgatg attgatgcct tcatcgagca
      121 ggaacgtgta gacgccccgc cggagccgcc agccaggctc tggccggacc ctgaggaatt
      181 gctggagccg ttaagtgatc tcgatctgcg cgcggccggg atcagctcag taatctgggc
      241 gaccggattt cgctacaagt tcgactggat cgaggcggac atcttcgagg cggatgggga
      301 accgcgccac cttcgcggca ttacgccggc cccgggtctc tatttcctcg ggttgcgttg
      361 gctgtacaag ttcaagtcgt cctttatcca cggcgtggac gaggacgcgc agtacctggc
      421 ccaacacatc gccgagcgcg cctagccttt cgcggcgatg gccgccagga cgcgctcggg
      481 ggtgaagggg gcctcggtga cacgcgcacc gactgcatcc tcgatggcgt tggcgattgc
      541 tgccgccacg ggaacgcagg gcgtttctcc cactcctttg gctccgaagg ggccgtaggt
      601 ggagggcacc tccaccaatt cgatgtccag ctcggggacg tgaggcgccg tggtcagtaa
      661 atattcccac agattcgcgt tggtgggagt accgccttcg gtgcgaatct cctcggtgag
      721 cgcgtagccc aggccaaaca ccacgccacc ttcgagctgc ccgaggcacg cgagcggatt
      781 gatggcccgt cccacgtcct gggcgctgaa gtagcgcagg accttcaccg cgccggtttc
      841 cgggtcgacc tcgacctggg ccgccacgca ggacgtgctg ggagcatcaa cgatttccgt
      901 ctgctccttg ccgtggagct gtacctcgcg ctcccgcacg acggcgctgg tcccgatgat
      961 ggctccagcg gcggaggtcg tcgcggcgtg ggctgcctcc gcgatggaca ggtgctggct
     1021 cgggtccgat ctcacgatga gctctccgtc ctggatctgc agctcttcgg gatcgacctt
     1081 gaggcgctcc gatgcgaaga gcaaaagctt gtcgcgcgcg tcctcggcag cctgacggac
     1141 ggagttgccg actcgatagg tggcgttgct tccgccgatt ccgccttcaa tcggcgttga
     1201 ttcggtgtcg gctgccacca cggtcacctg gtccatgggc acgccgagca cctggctggc
     1261 gatctgcgcg accaggctcc actgcccgcc accctgatcg gcggcgccag tgagcactac
     1321 cacgctcccg tccacgtcga tcttcacggt cacggcactc tcggaggtgc cagcttttgg
     1381 cccgtacgcc caggtgccca gcgccacccc gagcccctga ttcttgccgt tctcgctatg
     1441 gcgcgcgacc caggcctggg tccgctcgat gcactcgacc aggcccgagt tgcgcaggat
     1501 ggctccggat ggaaccttgt cgccgttgcg caggatgttc ttgaggcgca gctccagcgg
     1561 gtccatg
//
LOCUS       DASYRV010000305         5578 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_535523, whole genome shotgun sequence.
ACCESSION   DASYRV010000305 DASYRV010000000
VERSION     DASYRV010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5578
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_535523"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1186)
                     /locus_tag="VGQ24_07925"
     CDS             complement(<1..1186)
                     /locus_tag="VGQ24_07925"
                     /inference="COORDINATES: protein motif:HMM:NF028500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEV8454803.1"
                     /translation="MPARSAAAAVRLDTPVKFLKGVGERRAEALERLGIRTARDLLWH
                     LPHRYVDASAVTPLAKAELGQEVACVGQVVAKGVLPTRRGLRIFHAVLRDDSGLLECV
                     WPGQPFLDRNIAVGQTLLVSGPVRFYHGRQMAPREYVVLADAVGDADPLTAGKVLPVY
                     PATEGLSHKVIRSLVERHLDALIALSDDVLPETLRRGLGLPELPEALRAVHRPGSLDE
                     AERGRRRLAFDELLDLQLMLIRARAVAKRHRSGVAFTIKRELTTRLKESLPWELTDDQ
                     HRAIREITGDMTAPERMHRLLMGDVGTGKTVVALFAMLLALENDFQAALMAPTELLAE
                     QHAATLDVLLAPLDLRPEVLLGRQTPAEKSAARKRLATGQARLVVGTHALLQEGVSFR
                     RLG"
     gene            complement(1193..2134)
                     /gene="ftsY"
                     /locus_tag="VGQ24_07930"
     CDS             complement(1193..2134)
                     /gene="ftsY"
                     /locus_tag="VGQ24_07930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEV8454804.1"
                     /translation="MALNRLGDGQKQSLWSRIKRVALTDVGALMRGLNADDLERMEQV
                     LIEADFGVAATVELTQALEDEVRRGKLKTEADLKGALQERLVAMLEGAEDPGAMVRPT
                     SGPAVILIVGVNGTGKTTTAAKLARRLQQEGRNVLLAAADTYRAGAIAQLQVWANRLG
                     IPCVAGAPGGDPASVAFDAIEAAISRGLDTVIIDTAGRLHTQDGLMEELRKITRVIGR
                     RLPGAPHETFLILDGTVGQNAIQQGQLFSQAVSPTGIIVTKLDGSARGGAVTALRREL
                     GLPIRFIGLGESLEDLEPFDPERFAENLLAETPVEAS"
     gene            complement(2176..3996)
                     /locus_tag="VGQ24_07935"
     CDS             complement(2176..3996)
                     /locus_tag="VGQ24_07935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454805.1"
                     /translation="MTALVVLLAVGLAAFTYLGLERLGRRGWVPLAFRTVAWTALGLL
                     LINLSCPVRGAALRPLVLLDASLSLGAAGGRWREARDSAASWGEVRGFGDERLNRDTL
                     PSRGRSLLAPALLAASGTDRAIMVVSDGEIEDLHDIPPDILARSEVRLFPRQQLPDLA
                     ITQVLGPARVTAGDSIPLDITLQAVGASARDSVRVEVLAGSTRVGARTVRLSGQAGGR
                     TRLVVPPSALSPGDHLLRVALAGNQDAEPRTDTRLHLVTVARTPGVVFLAGPADWDSR
                     FLHRALRDVSQLPVRGYVRIEGNRWRSMVDLRPVPIEQVRRAARRADLLILKGGVAEF
                     ADGSLARGIWSWPSGEGGETQVPGDWYLSATDASPVSGAFLSQPVDSFPPAIQLIPMD
                     VGPSDWVALYAQLGRRGPQRPAVLGRQGGRVRRVTVAADGLWRWAFRGGSSEQSYRSW
                     VAATASWLLGGSDSARGLARPVQPVVPNGRPVLFEWVGSGSPVRQTVTWSRTGQAASA
                     SAEARPPDTLHFDGEGRATAWLSPGEYRYRLGSGGSGTVAVEQYSDEFLPRAVTLTPH
                     TGRVQRPTSRTAARDWLWLFGICVLALSAEWLARRRLGLR"
     gene            complement(3993..4742)
                     /gene="hisA"
                     /locus_tag="VGQ24_07940"
     CDS             complement(3993..4742)
                     /gene="hisA"
                     /locus_tag="VGQ24_07940"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR00007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HEV8454806.1"
                     /translation="MAAVAPVVDLFPAIDIRSGRVVRLSQGEATRQTVYGDDPVAVAE
                     HFVEQGASWIHVVDLDRALGTGDNLPAVSQIANRVGSRVRLQLGGGLRTIELVRAGLD
                     LGMARVVIGTAAAVDPSFVAAAVGAMGSERLAVGIDTREGKVALRGWTDTSTERAEEL
                     ARRVVADGIDTVIYTDIARDGMLGGPDLAGAGALLATGARVIVSGGIASAEDIRRARE
                     SGLVGVIVGRALYEGRLTLSEALAACHPAAR"
     gene            complement(4730..>5578)
                     /locus_tag="VGQ24_07945"
     CDS             complement(4730..>5578)
                     /locus_tag="VGQ24_07945"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEV8454807.1"
                     /translation="SLYEALDAGVSDEQLDGVNRRRLAWDLADVYAWEIDFTRDIQPG
                     DRFQVVYERMVSEDGEVRLGRVLASDLIMSGKSLTAFRFGGGEGRTALYYDTEGNSLR
                     RAFLRAPVEFRRISSRFASARFHPVLGLTRRHEGTDYAAAPGTPVMAAGDGIVLRAGR
                     TGGYGNLIELRHLNGITTRYGHLRGFARNIRRGVRVEQGQIIGYVGSTGLATGPHLHY
                     EFRMNGVARDSRKVKLGNGAPVEARDRDRFEQERDRHLILLHQATPSVPALAGQMAES
                     PTRWLP"
BASE COUNT          965 a         1970 c         1815 g          828 t
ORIGIN      
        1 ggcccagccg gcggaacgac accccttcct ggaggagcgc gtgggtgccc acgaccagcc
       61 gcgcctgtcc ggtagcaagc cgcttccggg cggcggactt ctcggcgggc gtttgccggc
      121 ccagcaggac ctccggcctg agatcgagcg gcgcgagcag aacgtcgagc gtagccgcgt
      181 gttgctcggc caggagctcg gtgggtgcca tcagcgccgc ctggaagtca ttctccagcg
      241 caagcagcat ggcaaagagg gccaccaccg tctttccggt tccgacgtcc cccatgagca
      301 accggtgcat ccgctcggga gcggtcatgt ctccggtgat ctcgcggata gcccggtgct
      361 gatcatcggt gagctcccac ggcaggctct ctttgagccg ggtggtcagc tcccgcttga
      421 tggtgaacgc cacgccgctc cggtgtcgct tggcgaccgc acgtgcccgg atgagcatca
      481 gctggagatc gagcagctca tcgaaggcca agcggcgcct tccccgctcc gcctcgtcca
      541 acgatccggg gcggtgcacc gcccgaagcg cctccggcag ttccggcagg cccaggccac
      601 gtcgcagcgt ctcaggcagc acatcatcgg agagcgcgat caaggcgtcg agatgccgtt
      661 cgaccagcga gcggatgacc ttgtggctga gcccttcggt ggccggatag accggcagca
      721 ccttacccgc ggtgagcgga tcggcgtcgc ccacggcatc ggccagcacc acgtactctc
      781 gaggggccat ctggcggccg tgatagaacc gcacgggacc cgacaccagc agcgtctgtc
      841 cgaccgcgat gttacgatcg agaaacggct gtcccggcca cacgcattcg agcagcccgc
      901 tgtcgtcccg caggaccgcg tggaagatcc ggagcccacg gcgggtcggc agtactccct
      961 tcgccactac ctgcccgaca caggccactt cctgccctaa ctccgccttg gcaagcggag
     1021 tgacggctga cgcgtccacg tagcgatggg gaaggtgcca cagaagatca cgggcggtgc
     1081 ggattccgag gcgttccaac gcctcggccc gtcgttcccc gacccccttg agaaacttga
     1141 ccggagtgtc gagacggaca gctgccgcgg ccgaacgggc aggcatgtcc cgttaggacg
     1201 cctcgaccgg cgtctcggcg agaagatttt cggcgaaccg ctccggatcg aacggctcca
     1261 ggtcctccag cgattcaccc aggccaatga atcgaatagg cagcccaagc tcccgtcgca
     1321 gggccgtcac ggcgccaccg cgagcgctgc cgtcgagctt ggtcacgatg ataccggtcg
     1381 gggataccgc ttgggagaac aactggccct gctggatcgc attctggccc actgtcccgt
     1441 ccaggatcag gaaggtctcg tgaggcgcgc cggggagtcg gcggccaatg acacgggtga
     1501 tcttccgaag ctcctccatg agcccgtcct gggtatggag ccgcccggcc gtgtcgatga
     1561 tcacggtgtc gagaccccgc gagatcgctg cttcgatggc atcgaacgca accgacgcgg
     1621 gatcgccgcc gggtgcgccg gccacgcacg gtatgccgag ccggttggcc cagacctgta
     1681 gttgggcgat ggcgccggcg cgatacgtgt cggcagccgc cagcagaacg ttgcgtccct
     1741 cctgctgtaa ccgccgcgcg agcttggcgg ccgtcgtcgt ctttcccgtt ccgttgaccc
     1801 cgacgatcag gatgaccgcg gggcccgacg tcggccgaac catggcgcca ggatcttcgg
     1861 ctccttccag cattgccacc aaccgctcct gaagtgctcc cttgaggtcc gcttctgtct
     1921 tgagcttgcc gcgtcggacc tcgtcctcga gggcttgggt gagctccacg gtcgccgcca
     1981 caccgaagtc ggcttcgatg agcacctgct ccatcctctc caggtcgtcc gcgttgaggc
     2041 cgcgcatgag tgcgcccacg tcggtgagcg cgacgcgctt gatgcgggac cagaggctct
     2101 gcttctggcc gtctcccagt ctgttcaatg ccatcgcctc atcatccccg agctaggtga
     2161 ccgaaatcta ccacctcacc ggagcccgag cctgcgccgc gccagccatt cagccgagag
     2221 agccagcacg cagattccaa acagccacag ccagtcgcgg gcggccgtgc gggaggtagg
     2281 ccgctgtacc cggccggtgt ggggtgtgag agtgaccgct cgggggagaa actcatccga
     2341 gtattgctcg acggcgaccg tgccggagcc gccgctgccg agacggtacc gatactcgcc
     2401 tggcgagagc catgcggtgg cccgtccctc accatcgaag tgcagcgtgt ccggcggccg
     2461 cgcttcggcc gaggcagatg cagcttggcc ggtcctggac caggtcaccg tctgacggac
     2521 gggtgagccg gaccctaccc actcgaagag caccgggcgc ccgttcggca caaccggctg
     2581 gaccgggcgc gccagacctc gggcggagtc ggacccaccc aggagccaac tcgccgtggc
     2641 ggcaacccag gaccggtaac tctgctcgct cgacccaccc cgaaaggccc agcgccagag
     2701 tccatcggcg gccacggtga cccggcggac tcgtcccccc tgacgcccga gcaccgccgg
     2761 ccgctgagga ccgcggcggc cgagctgcgc atacagcgct acccaatcgc tgggaccgac
     2821 atccatcggg atcagctgta tcgcgggagg aaaggagtcc actggctggc tcaggaatgc
     2881 gccggatacg ggagaggcat ccgtggccga caggtaccaa tcgcccggaa cctgggtttc
     2941 gccgccttcg ccactcggcc agctccagat cccccgggca aggctgccat cagcgaactc
     3001 tgccacccca cccttgagta tcagcaggtc ggctcggcga gccgcccggc gcacctgctc
     3061 tatcggaacc ggccgaaggt ctaccatcga gcgccagcga ttgccctcga tgcggacgta
     3121 tccccgcacc ggcagctgcg acacgtcccg gagcgcccga tggaggaatc ggctgtccca
     3181 gtctgccggc ccggccaaga acacgacgcc gggagtccgg gcgacagtca cgagatgaag
     3241 acgggtgtcg gtgcgaggtt ccgcgtcctg gttacccgcg agcgcgactc gaagcaggtg
     3301 gtcaccgggc gataacgccg agggaggcac cacgagccga gtacgaccac cggcctgccc
     3361 gctcagtcga acggtgcgag ctcccacccg ggtcgatccc gcgagtacct cgacccgaac
     3421 gctgtcgcgt gcactggcac caaccgcctg aagcgtgatg tcgagcggaa ttgaatcacc
     3481 tgcggtgacc cgggccggac ccaatacctg ggtgatcgca aggtccggga gctgttgccg
     3541 gggaaacaag cggacctcac tgcgggcgag aatgtcgggc gggatatcat gcaggtcctc
     3601 tatctccccg tcgctcacca ccatgatggc ccgatccgta cccgacgcgg caagcagcgc
     3661 gggggcgagc agggagcggc ctcggcttgg tagcgtatcg cggttgagcc gctcgtcacc
     3721 gaaaccgcga acctctcccc agctcgcggc ggaatcccga gcctcccgcc accgcccccc
     3781 ggctgcaccg aggctgaggg acgcatcgag cagcaccagt ggccggagcg cggccccccg
     3841 caccggacag ctcaggttga tcagcaacag cccgagcgcg gtccaggcca cggtgcggaa
     3901 ggccagaggc acccaccccc ggcgtcccag ccgttccaga ccgagatagg tgaacgcggc
     3961 gagtcctact gccaggagaa cgacgagcgc cgtcatcggg ccgctggatg gcaggcggcg
     4021 agcgcctcgg acagagtcaa ccggccctca tacaaggcgc gcccgacgat gacaccgacc
     4081 aggccggatt cacgggcacg ccggatatcc tcggcgctcg caatgccgcc gctgacgatg
     4141 acgcgagcac cggtggccag tagcgccccc gcgccggcca ggtcggggcc gccgagcatc
     4201 ccgtcgcgtg cgatatcggt gtaaatcacc gtgtcgatgc cgtctgccac cacgcgccga
     4261 gctagctcct cggcgcgctc ggtggacgtg tcggtccagc cgcgcagcgc gaccttgcct
     4321 tcacgggtgt cgatcccaac cgcgagccgc tcggagccca tcgcgccgac tgccgcggcg
     4381 acgaagctgg gatccacggc ggcggccgtg ccgatcacga cccgggccat accgagatcc
     4441 agaccggcgc gcacgagctc gatcgtccgc aaaccgccgc cgagctgcag ccgcacgcgt
     4501 gagcccaccc ggttggctat ttgggagact gccggaaggt tgtcgcccgt gcccagggcg
     4561 cgatccaggt ctaccacgtg gatccagctc gcgccctgtt cgacaaagtg ctcggccacc
     4621 gccacggggt catccccata aacagtttgc cgcgtcgcct caccctgact caggcgaacg
     4681 acgcggccgg atcgaatatc gatggcggga aagagatcca ctacaggcgc tacggcagcc
     4741 accgcgttgg ggattcagcc atctgaccgg cgagcgccgg caccgaaggg gttgcctggt
     4801 ggagaagaat gagatggcgg tcacgctcct gctcgaatcg gtcgcgatca cgggcttcca
     4861 ccggagcgcc gttccccagc ttgaccttgc gtgagtccct ggccacaccg ttcatccgga
     4921 attcgtagtg caggtggggt ccggtagcca gtcccgttga gccgacgtag ccgatgatct
     4981 ggccctgctc gacccgcaca ccccggcgaa tgttgcgggc gaagccgcgc aggtgaccgt
     5041 accgcgtggt gatcccgttc aggtggcgga gctcgatgag gttgccgtag ccgccggtgc
     5101 gaccggcacg aagcacgatg ccatcgcccg ccgccatgac cggcgtgccc ggcgcagcgg
     5161 cgtagtcggt accctcatgc cggcgagtca gcccgagcac cggatgaaac cgggcactgg
     5221 cgaatcggga ggagatccgg cggaactcca ccggagcccg caggaacgcc cgtcgcaatg
     5281 aattgccttc ggtatcgtag tacagcgccg tgcggccttc tccaccgccg aaacgaaagg
     5341 cggtcaaact ctttcccgac atgatgagat cgctcgcgag cacccgcccc agccggacct
     5401 ctccatcctc tgagaccatg cgctcgtata ccacctgaaa ccggtcgccg ggctggatgt
     5461 cgcgagtgaa gtcgatttcc caggcgtaga cgtcggccag gtcccacgcc agacggcggc
     5521 ggttgacgcc gtcgagctgc tcgtcgctca cgcccgcatc caacgcctcg tagagcga
//
LOCUS       DASYRV010000306         5586 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1932319, whole genome shotgun sequence.
ACCESSION   DASYRV010000306 DASYRV010000000
VERSION     DASYRV010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5586
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1932319"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1525
                     /locus_tag="VGQ24_07950"
     CDS             <1..1525
                     /locus_tag="VGQ24_07950"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8454808.1"
                     /translation="FVIMVQPLFLLYFLLYNTYTLWLIALSARQVRRRVASHFIEDLD
                     LIDEGDLTKPLTMIVPAYNEEVTIVDSVIGLVNSDYPRFEIVVVNDGSTDATLERLKH
                     AFGLRRTEVPYRPAVATAPVRAMYEATLPLPAGVMRVVVIDKENGGKADALNAGINAS
                     TTPYFVSLDADSILDDHALKELMRVVQEDPRVVAVGGQVAIANGCTVRNSHVVSVGLP
                     TRSLPRFQMVEYLRSFTAARTGLDRMHSILILSGVFAVFEKETVIRAGGYLTPFLRHR
                     LTEEYVGEGVGTVCEDMEIIVRLHRYILDKLHDRRIAFLPHPVAWTEVPETFESLRKQ
                     RGRWYRGLRESLRYHRAMLGHSKFGRIGWFALPAFWLFEYYGPVVEVVGYLFILFLFI
                     MEKLLGQSFLSYDYLVAFLLASLGYGILVNVFAVLVGAWRFRYGLADRLQRHLLPFSR
                     RREVFILLLYAVLENFGYRQLTLYWRLRGLWDAWRGKTGWEKFARVGFRPGAATAHG"
     gene            1518..2573
                     /locus_tag="VGQ24_07955"
     CDS             1518..2573
                     /locus_tag="VGQ24_07955"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8454809.1"
                     /translation="MAENPLPRVLLVDDDPDIARLVQHILSSHGFGPAIQVTTGREAL
                     AALSGVDIVLLDQQLPDTSGLDVLDAIRSRPAPPAVVLVTGHGNESLAAAALRRGADD
                     YLAKDSSLSDLLPQILERVRRNRELRKALAAAEQDLVRAERLAAIGEMTVTLHHEINN
                     PLMAALAEVELLLGQPSATPDQQREGLGEVRVALQRIRDIVQRIGKLREARSKDYLSG
                     VQMLDLERPSGEASVLSRGTALIYVPDEDLARIVSLLLRGAGFQVERRATVADLQAWS
                     ERIGVTIVLVAGGADTAGEHPLGGFVPRRDRAYLMVALVAGGGTAATAAGADHIVQLP
                     FDPGTFTAEILRRLSPA"
     gene            complement(2536..3585)
                     /locus_tag="VGQ24_07960"
     CDS             complement(2536..3585)
                     /locus_tag="VGQ24_07960"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEV8454810.1"
                     /translation="MSEEANLFAQQEANRRRSQWLVIGFILFFAWVGFGGDVAFYLMT
                     ADAGSGSYHHVVPYIGIIATLGAGVICWYAWRFGPEKVLWATGAWELVEPATPEQKQL
                     VNVVEEMAIASGLPKPRIWVVPDADPNAFATGRDAASASIAVTEGLLATLSRDELQAV
                     VAHEMAHIRNLDVRLMTLLAGMVGAIALMSDGFGRMIGRGGRAGARWSGGRRGGSSGG
                     KGGNPLAIVILVLWLLTLLVAPVVSRLLAMAVSRKREYLADATAAQLTRHPMALAAAL
                     EKLAGATAATQSVTRGAAHLCIVDPAPGVLASKEGFLADFLGSHPPIRQRIIRLQGMA
                     YQQAKRETTAAISPP"
     gene            complement(3582..4154)
                     /locus_tag="VGQ24_07965"
     CDS             complement(3582..4154)
                     /locus_tag="VGQ24_07965"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEV8454811.1"
                     /translation="MSTIVLLVVLAGVVLWVVGAYNGLVSLKNQVMNAWKQIDVQLKR
                     RHDLIPNLVNTVKGAMDFERSTLDAVISARNRAIGATGVRQTAQAEGELTQALGRLFA
                     LTEAYPDLKATGNVAQLQEELTSTENKIGFARQLYNDVATQYNTKQMQFPTNLVAGLA
                     KTTPAELWEIEDSAERAVPIVDLSLNKPTS"
     gene            complement(4206..4958)
                     /locus_tag="VGQ24_07970"
     CDS             complement(4206..4958)
                     /locus_tag="VGQ24_07970"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEV8454812.1"
                     /translation="MNPAPSYAPADPLTTLREYRALAPWGLRDLAALAGGILDASGVV
                     PVNAAARARPSERTIRFYVARGLVSPPDGRGTAAVYSYRHLLQVLAIKLRQMEGATLE
                     SMLKEFAGLTGDLIERRAATALGPGLPPPDHLPLLRTPGTGRGRVGRAVMAWLAPVEG
                     LTAASSSCRRIAVAPGVEVLIDEQHPALRLNGDTAVIAEALRQALASVVGLDTSPAFA
                     EERRAAVEPAWSPIEHESETSDGSPVSSESTG"
     gene            complement(4955..5365)
                     /locus_tag="VGQ24_07975"
     CDS             complement(4955..5365)
                     /locus_tag="VGQ24_07975"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8454813.1"
                     /translation="MTARILIVDDEPALRRTLERALTGYHYEVVSVADPHSAYQMLSE
                     TTFDLVLLDLRLPQIGGDTLFLAIIRQWPRLRDRVILMSGDPWSEQMDWPRELAACPI
                     LAKPFSLEALAKTVRAALAAADPHNDLLEGNGHG"
     gene            complement(5362..>5586)
                     /locus_tag="VGQ24_07980"
     CDS             complement(5362..>5586)
                     /locus_tag="VGQ24_07980"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEV8454814.1"
                     /translation="LTRLLYAHRLLLDPGYTVEDVALKLGYSKTKTLQMHLRAVFGVT
                     AGELRVSLSTEEALMIVTDRYFSPMSQVAS"
BASE COUNT          928 a         1827 c         1826 g         1005 t
ORIGIN      
        1 cttcgtgatc atggtacagc cgctgtttct gctgtacttc ctgctgtata acacctacac
       61 gctctggctg attgccctgt ccgcccggca ggtccggcgc cgcgtggcga gccatttcat
      121 cgaggacctc gatctcattg acgaggggga tctcaccaag cccctgacca tgatcgtacc
      181 cgcgtataac gaggaggtga cgatcgtgga cagtgtcatc ggcctcgtga actcggatta
      241 cccgcgtttc gagatcgtgg tggtgaatga cggctctacc gatgctacgc tcgagcggct
      301 caagcatgct ttcgggctgc ggcggaccga ggttccctat cgaccggcag tagcgaccgc
      361 tccggttcgg gcgatgtacg aagcgaccct tccactcccg gctggcgtca tgcgggtggt
      421 cgtcatcgac aaagagaacg gcggcaaggc ggacgctctc aacgccggca tcaacgcctc
      481 taccaccccc tacttcgtct ctctcgatgc agactcgatc cttgacgacc acgcgctcaa
      541 ggagctgatg cgggtggtac aggaggaccc ccgggtggtg gcggtggggg gacaggtcgc
      601 catcgccaac ggctgcaccg tgcgcaacag tcacgtggtg agcgtcggcc tcccgactcg
      661 atcgctgccc cgattccaga tggtcgagta cctgcgctcc ttcaccgcgg cacggaccgg
      721 gctcgaccgg atgcattcca ttcttatcct cagcggagtg tttgccgtat tcgagaaaga
      781 gaccgtgatc cgcgcaggcg ggtatctcac gccattcttg cggcaccggc tgacagagga
      841 gtacgtcggc gagggcgtgg gtaccgtctg tgaagacatg gagatcatcg tccggctgca
      901 ccggtacatt ctcgacaagc tgcacgatcg ccggatcgcc ttcctcccgc acccggtagc
      961 ctggaccgag gtgcccgaga cgttcgaatc gctccgcaag cagcgtggcc gctggtaccg
     1021 ggggcttcgg gagtccttgc gatatcaccg ggccatgttg ggccacagca agttcggccg
     1081 catcggctgg ttcgcgctgc cggccttctg gctgttcgag tactacgggc cggtggtgga
     1141 agtagtcggg tacctgttca tcctgtttct cttcatcatg gaaaagctgc ttggccaatc
     1201 cttcctcagt tacgactatc tggttgcgtt cctgctcgct tccctaggat acggcatcct
     1261 ggtgaatgtc tttgccgtgc tggtgggtgc ctggcgtttc cgttacggcc tggccgaccg
     1321 actgcagcgg cacctgctgc cgttcagccg ccggcgcgag gtgttcattc tgctcctgta
     1381 cgccgtgctg gagaacttcg gctaccggca gctcacgctc tactggcggc tgcgcggact
     1441 gtgggatgcc tggcgcggca agaccgggtg ggagaagttc gcccgcgttg gctttcggcc
     1501 cggagcggcg acggcgcatg gctgagaacc ccctgcctcg cgtccttctg gttgacgacg
     1561 accccgacat cgcccgactg gtccagcaca tcctgagcag ccatggcttt gggccggcga
     1621 tccaggtcac cacagggcgc gaggcgctgg cggcgctcag cggcgtggat atcgtgctgc
     1681 tcgaccagca gctcccggac accagcgggc tcgatgtcct cgacgcgatc aggagccggc
     1741 cggccccgcc cgcagtcgtg ctcgtcactg ggcatggcaa tgaatcgttg gccgccgccg
     1801 cactccgtcg cggggccgac gactacctgg ccaaggactc gtcgctgagt gatctgctac
     1861 ctcagattct cgagcgggtg cgccgcaacc gtgagctgcg aaaggcgctc gccgcggccg
     1921 agcaggattt ggtgcgcgcc gagcggctgg cggcgattgg cgagatgacc gtcacgttgc
     1981 accacgagat caataaccca ctcatggcgg cattggccga ggtagagctg ctgttgggcc
     2041 agccgagcgc gacaccggat cagcagcggg agggtctcgg cgaagtgcgc gtcgcgctcc
     2101 agcgaatcag ggacattgtc cagcggatcg ggaagctgcg ggaagcgcgg agcaaggact
     2161 acctgagcgg cgttcagatg ctcgatctcg agcgaccttc cggggaagct tcggtcctga
     2221 gccgtgggac ggcgctgatc tacgtccccg atgaagacct ggcgcgcatc gtgtccttgc
     2281 tcctacgggg tgccggcttt caagtcgagc gccgcgccac cgtggccgac ttgcaggcct
     2341 ggtcggaacg catcggggtc acgattgtgt tggtcgcggg tggtgccgac acagccgggg
     2401 aacacccgct cggcgggttt gtcccccgac gtgatcgagc ctacctgatg gtggctctgg
     2461 tcgctggagg gggcactgct gccacggctg ccggcgccga ccatatcgtg cagctgccct
     2521 tcgatccggg aacgttcacg gcggagatat tgcggcggtt gtctcccgct tagcctgctg
     2581 atacgccatg ccctgaagtc ggatgatgcg ctgccggatc ggcggatgag agccaagaaa
     2641 atcggccagg aatccctcct tcgaagccaa caccccgggt gccggatcca caatgcacag
     2701 atgcgccgcg ccccgagtga cggattgcgt cgcggcggtg gccccggcca gcttctccag
     2761 cgcggcggcc agtgccatcg ggtggcgcgt cagctgtgcc gccgtagcgt cggcgagata
     2821 ctcccgcttt cgactcaccg ccatggctag cagccgggag accaccggcg ctaccagcag
     2881 cgtgagcagc cagagtacca ggatgacgat ggccaggggg ttgccaccct tgccaccgct
     2941 gctgccgccc cgccgcccac ccgaccaacg cgcacctgct ctgccacccc gaccgatcat
     3001 ccgcccgaac ccgtcggaca tgagcgcgat cgcaccgacc attcctgcca gcagtgtcat
     3061 gagccgcacg tcgaggttcc gaatgtgcgc catctcgtgg gccaccaccg cctgaagctc
     3121 gtcgcgggag agagtcgcca ggaggccttc cgtgaccgcg atgctggcac tcgcggcgtc
     3181 gcgcccggtg gcgaaggcgt tgggatcggc atccggcact acccagatcc gcggcttcgg
     3241 caggcctgag gcgatcgcca tttcctcgac cacgttgacc agctgcttct gctctggcgt
     3301 ggcgggctct accagctccc aggcaccggt cgcccacaac accttctccg gcccgaagcg
     3361 ccacgcgtac cagcagatca ctccggcacc gagggtggca atgattccga tgtagggcac
     3421 cacgtggtga taggagccgg agccggcgtc cgcggtcatc aaatagaacg cgacgtcccc
     3481 gccgaatccg acccaggcaa agaagagaat gaagccgatg accagccact gcgagcgccg
     3541 acggttcgcc tcctgctggg cgaacaggtt ggcttcttcg ctcacgacgt cggtttgttg
     3601 agcgacagat ccacgatggg tacggctcgc tctgccgagt cctcgatctc ccagagctcg
     3661 gccggcgtgg tcttggccag cccggccacc aggttggtgg gaaactgcat ctgcttggtg
     3721 ttgtactggg tcgcgacgtc gttatagagc tgccgggcga agccgatctt gttctcggtg
     3781 ctggtgagct cctcctgaag ctgagccaca ttgcccgtcg ccttgaggtc gggataggcc
     3841 tccgtcaggg cgaacagacg accgagtgct tgagtcagct caccctcggc ctgggccgtc
     3901 tggcgcacgc cggtggcccc gatggcccgg ttccgggccg agatcacggc gtcgagtgtc
     3961 gaccgctcga agtccatcgc ccccttgacc gtgtttacca ggttcggaat caggtcgtgc
     4021 cgtcgcttga gttgcacgtc gatctgcttc caggcgttca tgacctggtt cttgagtgag
     4081 acgagtccat tgtaggcgcc caccacccac aggacgactc ccgcaaggac gaccagcagg
     4141 acgatcgtac tcatgttcga tcctcgattg tgtgagggtg atgcgggggt ggcgacctgc
     4201 gtgcctcagc cggtgctctc cgagctcacc ggggatccgt cgctggtctc ggactcgtgc
     4261 tcgatcgggc tccaggccgg ctcaacggct gctcgacgct cctcggcaaa ggcaggcgag
     4321 gtgtccagtc cgacgactga ggccagcgcc tgacgcagtg cctcggcaat cacggccgta
     4381 tcgccattga gccggagagc gggatgctgc tcgtcgatca gcacctcgac accaggggcc
     4441 accgcgatac ggcggcaact ggagcttgca gccgtgagtc cctcgaccgg agccagccac
     4501 gccatcaccg cccgtcccac ccggccacgt ccggtgcccg gcgtgcgcag caacgggagg
     4561 tgatccggtg gggggagtcc cggccccagc gccgtggcgg cgcgccgctc gatgagatcg
     4621 ccggtcagcc cggcaaactc cttcaacatc gactcgagcg tggcgccctc catctgcctg
     4681 agcttgatcg ccaggacctg gagcaggtgc cgataggaat acacggctgc ggtgccgcgc
     4741 ccgtcgggtg ggcttaccag accgcgggcc acgtagaacc ggatagttcg ctcgctgggc
     4801 cgggcccgtg ccgcagcatt caccggaacg acaccagatg catcaaggat tccgcctgcc
     4861 agggcggcaa gatcacggag gccccagggc gcgagcgccc ggtactctcg aagcgtggtg
     4921 agcgggtcgg cgggggcgta ggaaggcgca gggttcatcc gtgcccgttt ccctcgagga
     4981 ggtcgttgtg gggatcggcg gctgcaagcg ccgcgcggac ggtcttagcc agggcttcca
     5041 ggctgaacgg ctttgccaga atcgggcagg cggccagctc tctcggccag tccatctgct
     5101 cggaccaggg atcgccgctc atcagaatca cccggtctcg caatcgcggc cattggcgga
     5161 tgatggcgag aaacagcgtg tcgcccccga tctggggtaa cctgaggtcg agcaacacca
     5221 gatcgaaggt tgtttccgac agcatctggt aggccgaatg cgggtcggcc acagagacca
     5281 cctcgtagtg atagccggtg agggcgcgct ccagcgtgcg gcgcagcgcc ggctcgtcat
     5341 ccacgatgag gatgcgcgcg gtcacgaggc aacctggctc atgggactga aataacggtc
     5401 ggtcacgatc atcaaggcct cttcggtcga gagcgacacg cgcagctcgc cagccgtgac
     5461 cccaaacacc gcccgcaggt gcatttgcag agttttggtc ttgctgtatc ccagcttcag
     5521 cgccacgtcc tccacggtat agcccggatc gagcagcagc cgatgggcgt acagcagccg
     5581 cgtcag
//
LOCUS       DASYRV010000307         4399 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_330736, whole genome shotgun sequence.
ACCESSION   DASYRV010000307 DASYRV010000000
VERSION     DASYRV010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4399)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4399)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4399
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_330736"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1387)
                     /locus_tag="VGQ24_07985"
     CDS             complement(<1..1387)
                     /locus_tag="VGQ24_07985"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEV8454815.1"
                     /translation="MRFLFAVAVLQAPAAAPAPQGLPDSTRVAINRVFATWSATNSPG
                     CAAGVARNGATLFQNGYGMSNLEHDIPITPASIFHVASVSKQFTAMAITLLAADGRLS
                     LGDDIRKYLPEIPDYGHVITIRHLLNHTSGLRDQWDLLIMARGRFEENRITEADVLEI
                     VSRQKALNFVPGSEYLYSNTGFTLLGTIVRRVSGKSLRAFADERIFRPLGMQDTHFHD
                     DYTMIVKGRAAGYARIASGWRVSLPNYDTYGATSLFTTVGDLLKWEANFNRPVVGTEP
                     MLREMMTSATLTNGDSTAYGLGISTEIYRGTRLVGHSGGDAGYRTYAGLVPEHGLALV
                     VLCNASTANPGALARGVIDVLVGDKLAAVAPPVRATMSLTAPQLAPFAGVYANPVTGA
                     PQVVTLRKDTLTLGRGTGPPLMPMSPTRFRVMGQPVELEFTAAGVVQTSLGWPGRAPI
                     VAKRVAPALVQM"
     gene            complement(1699..1833)
                     /locus_tag="VGQ24_07990"
     CDS             complement(1699..1833)
                     /locus_tag="VGQ24_07990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454816.1"
                     /translation="MRRGLFEEEHAQGILQWPHSGFRVHTGVGVPEDDRAFALRLARC
                     "
     gene            complement(1896..2510)
                     /locus_tag="VGQ24_07995"
     CDS             complement(1896..2510)
                     /locus_tag="VGQ24_07995"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEV8454817.1"
                     /translation="MFSRSKSFHDAWYGAMGRDNTLPDQVAGMQDLARRYPWIDLDRA
                     AMYGHSGGGFITADAMFRYPDFFKVGISESGNHDQRAYEDDWGERYQGLLTSGPDGSD
                     NYAAEANQTMAKNLKGKLLLAHGTLDDNVPPYNTELVVEALIKANKDFDLLMLTNQRH
                     GYASMGNYMMRRRWDYFVRWLLNAEPPKEYEIKTPESRGGPPVP"
     gene            complement(2576..3628)
                     /locus_tag="VGQ24_08000"
     CDS             complement(2576..3628)
                     /locus_tag="VGQ24_08000"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HEV8454818.1"
                     /translation="MPPSIPLALAAPVRAELEAITRSTRTPAGLVHRARLILALADGA
                     SYTELIARWGVAATSISRWKQRFTARGIAGLQDAPRSGRPDRLAPAVEARILALTQQA
                     PPQPLTHWSVRRMATRVAVSPATVQRVWARAGLQPHRLERYVTSPDPDFERKAAAILG
                     LYLRPPAHAAVFCVDEKTAIQALDRLDPVLPLSPGRAERHGFEYLRHGTLSLYAALEV
                     GTGHVEGLTVARHTSAAFVAFLDQVVATQPRRREIHVICDNLSAHKTRAVRDWLAAHP
                     RVTIHYTPTYSSWLNQVELWFAKIERDCIARGIFTSVADLRRKLMQYIRLHNKTCRPF
                     HWIYRSPKHRIRTSGV"
     gene            4151..>4399
                     /locus_tag="VGQ24_08005"
     CDS             4151..>4399
                     /locus_tag="VGQ24_08005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454819.1"
                     /translation="MWFACGPCWNVVIAYQKSYEATRAIHDYWRTEIEARYPTFRLQE
                     SEEVRLSPYARQTKTKKQAAATLGVLDFLVTEARGARAV"
BASE COUNT          719 a         1434 c         1523 g          723 t
ORIGIN      
        1 tcatctgaac cagtgccggc gccacccgct tcgcgacgat cggcgcgcgc cccggccagc
       61 cgaggctggt ctgcacgacg ccggcggcgg tgaactccag ctcgaccggc tgccccatca
      121 ccctgaagcg cgtcgggctc atcggcatga gcggtggccc agtgcctcgg cccagcgtga
      181 gcgtgtcctt tcgcagcgtc accacctgcg gcgcgccggt cactggattc gcgtataccc
      241 cggcgaaagg cgcgagctgc ggagcggtga ggctcatggt ggcgcgcacc ggcggcgcaa
      301 ccgcggccag tttgtcgccg accagcacat caatcacccc gcgggccagc gcgccggggt
      361 tcgcggtgga ggcgttgcag agcactacga gcgccagccc atgctcgggg accagcccgg
      421 cgtaggtgcg gtaaccggcg tcgccaccac tgtggccgac cagcctggtg ccgcgataga
      481 tctcggtgct gatgccgagc ccgtacgccg tgctgtcgcc gttggtgagg gtggcgctgg
      541 tcatcatctc gcgaagcatc ggctcggtcc ccaccaccgg cctgttgaaa ttggcctccc
      601 acttgagcag gtcgcccacg gtggtgaaga gagaggtggc gccgtaggtg tcgtagttgg
      661 ggaggctcac ccgccacccg ctcgcgatcc gggcataacc cgcggcgcgt cccttcacga
      721 tcatggtgta atcgtcgtgg aagtgggtgt cctgcatgcc gaggggacgg aagatccgct
      781 cgtcggcaaa ggcgcggagc gatttgccgc tcacccttct cacgatcgtg cccaggaggg
      841 tgaagccggt gttgctgtag aggtactccg agcccggcac gaagttgagc gccttctggc
      901 gggagacgat ctccagcacg tcggcttccg tgatccggtt ctcctcgaag cgcccccgcg
      961 ccatgatcag gaggtcccac tggtcccgga ggccgctggt gtgattcagc aggtgccgga
     1021 tggtgatgac gtgcccgtag tcggggatct cgggcaggta tttccggatg tcgtcgccca
     1081 gcgaaagcct gccgtcggcg gccagaagcg tgatggccat cgcagtgaac tgcttggaga
     1141 ccgaggcgac gtggaagatg gaggccgggg tgatcgggat gtcgtgctcc aggttgctca
     1201 tcccgtagcc gttctggaag agcgtggcgc cgttccgggc gacgcctgcg gcgcagccgg
     1261 gactgttggt cgcgctccag gtcgcgaaga cccggttgat ggcgacccgg gtgctgtcgg
     1321 ggaggccctg cggcgcgggg gcggcggccg gggcctggag gacggcgaca gcgaacaaga
     1381 agcgcatggg tggtctcggg aaagggccgg gagaagatac cgctgttgga cgcgcgtggg
     1441 gcgaccgcga gccgaggcag gtcgcaccat ccagcctgcc gccgccgcgt gccccggctc
     1501 cggctggcgt accagccata gtaccgctgc atcacctggc cgggatcggg gatgtggctg
     1561 accactcggg ccaggaactc cagcgggtcc acgctggcgg tgccggcggt gggtccgtcg
     1621 gcctggtcgg agcgatcggt cacctgactg gagtcaccat cgtaggtcag ccgctccagc
     1681 gccacggggg gcgcgggctc aacagcgggc cagccgcagg gcaaaggcgc gatcgtcctc
     1741 gggcaccccg acaccggtgt ggacgcgaaa gcccgagtgc ggccactgga gaatcccctg
     1801 ggcatgctcc tcctcgaaga ggccgcggcg cacgctggcc cggctcgatg tcccctacac
     1861 cggttccacg gccgcgcacc tcgtccggcc ccccctcacg gcaccggcgg cccgccgcgg
     1921 gactccggcg tcttgatctc gtactccttc ggcggctcgg cgttgagcag ccacctcacg
     1981 aagtaatccc agcgccgccg catcatgtag ttgcccatgc tcgcatagcc gtggcgctgg
     2041 ttggtcagca tcagcagatc gaagtccttg ttggccttga tcagcgcctc gaccaccagc
     2101 tcggtgttgt aaggcggtac gttgtcgtcc agcgtcccat gggcgagcag cagcttcccc
     2161 ttgagattct tcgccatggt ctggttggct tccgcggcgt agttgtccga gccgtccggt
     2221 cccgaggtga gcaggccctg gtagcgctcg ccccaatcgt cctcgtacgc gcgctggtcg
     2281 tgattgcccg actccgagat gccgactttg aagaagtccg ggtagcggaa catcgcgtcc
     2341 gcggtgatga agccgccgcc cgaatgaccg tacatcgccg cgcggtcgag gtcgatccag
     2401 ggataccgcc gcgcgaggtc ctgcatcccg gccacctggt cggggagcgt gttatcgcgg
     2461 cccatcgccc cgtaccaggc gtcgtggaac gacttggagc gcgaaaacaa accaggggca
     2521 ggagatcgct cccctgcccc cggctacctg ctgcctgctg ctagtggact gtctctcaaa
     2581 caccgctagt gcggatgcga tgcttggggg atcggtagat ccagtgaaac ggccgacagg
     2641 tcttgttgtg gagccggatg tattgcatca gcttgcgccg cagatcggcg acggaggtga
     2701 agatgccgcg ggcgatgcag tcccgctcga tcttggcgaa ccagagttcg acttgattga
     2761 gccacgagct ataggtggga gtgtagtgga tggtcacccg gggatgggcc gcgagccagt
     2821 cccgcaccgc gcgggtctta tgcgccgaga ggttatcgca gatcacatgg atctcccggc
     2881 gcctgggctg ggtggcgacc acctgatcga gaaaggcgac gaacgcggcg ctggtgtgcc
     2941 gcgccaccgt cagcccttcg acgtgcccgg tgccgacttc gagcgccgcg tagagggaga
     3001 gcgtgccgtg gcgcaggtac tcgaagccgt ggcgctcggc ccggcccggc gagagcggca
     3061 acaccgggtc gagccggtcg agggcttgaa tggccgtttt ctcatcgacg cagaacaccg
     3121 cggcgtgggc cggcggccgc agatacaagc ccaggatagc ggccgccttc cgctcgaagt
     3181 cgggatcggg actggtcacg tagcgctcca ggcggtgtgg ctggaggcct gcccgcgccc
     3241 agacccgctg caccgtagcg gggctgacgg ccacgcgcgt cgccatccgc cgcaccgacc
     3301 agtgggtcag tggctggggc ggcgcctgct gcgtcagcgc caggatccgc gcctcgacgg
     3361 ccggggccaa gcgatccggg cgcccgctcc gcggggcatc ctgcaagcca gcgatccccc
     3421 gcgccgtgaa ccgctgtttc cagcgactga tgctggtggc ggcgaccccc cagcgggcga
     3481 tgagctcggt gtagctggcg ccgtccgcga gggccagaat caggcgggcg cggtgcacca
     3541 ggccggcggg cgtacgggtc gagcgcgtga tggcctccaa ctccgcccgg accggcgcgg
     3601 cgagagccaa cgggatagag ggtggcattc cccaagatat gccacacgac atactagcgc
     3661 aacttcagag atgatcaact agtacatccc ccccatccca tcggcagggt gaggacgact
     3721 tgccggtggg gcacgggcgc gagcagcgtc tggtcgagcc agaggctcca gcgggccagc
     3781 cgtttcgcat ggcaactggg gcagaagtag cgcgccttat cgggttcagc aggtggaaca
     3841 gttccaccgc ctcgtccccg tagtagctgc agaacgcata gaagttgact cgtagaaacg
     3901 cgggggacac attccccgct tcatgcctcc gtatcgcgac gtgctggcac cggacagtgg
     3961 cctcttcgag acctgcgctc gacacaccag ccgccataca tcgcgcttgg tccaacacct
     4021 ttacctttgc gacccctgcg caatccgctt ggttcgggaa ggcctgaaca atcgaccgcc
     4081 gatctaccat ggcgagaccg tcgcggggtt ttgcggtctc tgcaaccagc gtacggaggt
     4141 cacgctccgc atgtggttcg cctgcggtcc atgctggaat gtcgtcatcg catatcagaa
     4201 gtcgtacgaa gcgactcgcg cgatccacga ctactggcga accgagattg aagcgcgtta
     4261 cccaaccttt cggctccaag agagcgagga ggtaaggctt tcaccctatg cccggcagac
     4321 caagaccaag aaacaagccg ctgcaacgct gggagttctg gatttcttgg taaccgaggc
     4381 acggggagcg cgcgcggtg
//
LOCUS       DASYRV010000308         5545 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_330823, whole genome shotgun sequence.
ACCESSION   DASYRV010000308 DASYRV010000000
VERSION     DASYRV010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5545
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_330823"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..727)
                     /locus_tag="VGQ24_08010"
     CDS             complement(<1..727)
                     /locus_tag="VGQ24_08010"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEV8454820.1"
                     /translation="MRVSLVTSTGALLAVCEQAAPASPIARAQAAELAAAKSQLGEWV
                     IAFSEDISGLDPLATTSGAIYYDVFYHIFDTLVGYEGPNFTPTPRLAESWHYVNENTL
                     EMKLRRGVKFHNGEDFTADDVLYTYQGHKSNAKLGTGYVFDPVEKLEKLDAHTIRWTT
                     KGVLASLMPNIAQVLFVVPRSRASMGEEVFGKRPVGTGMYRLASDWTRDQPVRLAANE
                     AYWGGPGASPQRLQFKFIRDPSTR"
     gene            937..2211
                     /locus_tag="VGQ24_08015"
     CDS             937..2211
                     /locus_tag="VGQ24_08015"
                     /inference="COORDINATES: protein motif:HMM:NF020896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050485 - oxidoreductase activity, acting
                     on X-H and Y-H to form an X-Y bond, with a disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine/sarcosine/betaine reductase component B
                     subunit"
                     /protein_id="HEV8454821.1"
                     /translation="MRLELASYPVHEVVFSNRTEYHDGVLRVDQAGVEAWLAQDPALG
                     SVRLSLACPGDRARIIHVLDVLEPRCKPGWPGAAFPGVLGPADAVGHGRTCCLAGLAL
                     VQTGQFQRTEGLQMMRESIVDMSGPAAEIIPFSRTINLVVSFEAAPGVGNAEFDHAIR
                     VASARLAEALAHATAGQEPVDVRTYEQAEPRQDLPRVVWICMVQSLGLLEHTLVYGES
                     TVGKLPMPLFPADVLDGAVVSGNFLFACQRNRTYLYQNSTLLEELFALGGHELSLAGV
                     IIAPSSRHTLPEKERAADLAARTAALLGANAAVITQEGGGHAGVDFMLVCNRCERRGI
                     KTVLVNNEATDAEGTDTSFVYVVPEADAMVSTGKTEELIALPAMERVIGGQVLELEEV
                     QQPAAEAFTTSLRPLCCATSQMGETRLTVSQY"
     gene            2228..3559
                     /locus_tag="VGQ24_08020"
     CDS             2228..3559
                     /locus_tag="VGQ24_08020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011196985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:3290..3292,aa:Sec)
                     /transl_table=11
                     /product="glycine/betaine/sarcosine/D-proline family
                     reductase selenoprotein B"
                     /protein_id="HEV8454822.1"
                     /translation="MGTGEQRTVRVVHYLNQFFGGIGAEEAAGHGVEVRRGPVGPGLA
                     LQKALAERGEVMDTVICGDNYFAEHELQALERILAAIVGAQPDVVVLGPAFNSGRYGR
                     ACGAIGRAVVERLRVPAVTGMDPENPAVEEFRRFLYIVPTAATAVGMGPAISRIAALA
                     VRLVSGQRIGPAEEEGYLPRGFRRNALAAERGAQRAVRMLLKKIRGEPYRSETPLPCF
                     DRVEPAQPLSDLSQATIAIVTESGVVPRGNPDRLEAHAATHWVRYPIAGLRELTRESF
                     DCVHGGFDPSNAKADPNRLVPLDVLRDLEARGLIGKLHEYMYVTVGNGMPVLRAREFA
                     HEIAGELKAAGVQGVVLPATUGTGTRCGATLAKELEREGLPTVLFTAMVSVATTVGAN
                     RIVRGTAITHPLGDPLRPPEDERSRRERIVQAGMDALRVTPREGEIFEPEA"
     gene            complement(3562..4110)
                     /locus_tag="VGQ24_08025"
     CDS             complement(3562..4110)
                     /locus_tag="VGQ24_08025"
                     /inference="COORDINATES: protein motif:HMM:NF039330.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6036 family nucleotidyltransferase"
                     /protein_id="HEV8454823.1"
                     /translation="MPSASPELPRPWDTFLAAVDALLPDPIELHCLGGFVVAVRYHLP
                     RPTGDLDYIEIIPRHAMQGLQRLAGPESPLAKKYHLSFQHVGVASLPESYVQRLIELF
                     PGRFEKLRLFDLEGHDLALSKLARNSPVDREDVAHLAKVLPLDREILRTRYQKELRPI
                     IIGDPEIHDLTLQMWIDAYLGS"
     gene            complement(4091..4783)
                     /locus_tag="VGQ24_08030"
     CDS             complement(4091..4783)
                     /locus_tag="VGQ24_08030"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEV8454824.1"
                     /translation="MNSTNLKTGRLAKGLSQVEAAGRLKVSQSYLAMLEGGVRRLTPE
                     LARRAMRVYDLAPTALPPSELSVASNQTASETLAGDLAALGYPGLAYLRPRNWKPKNP
                     GEVLLSALARDDLESRLVEALPWLVLTFWPLDHDWLVREAKLRDLQNRLGLVVTLARR
                     LAERAGDQPRARTLEEFETVLERSRLAREDTLCRASLPEAERRWLVDHRSPEAKRWNV
                     LSDWTADALRFA"
     gene            5042..>5545
                     /locus_tag="VGQ24_08035"
     CDS             5042..>5545
                     /locus_tag="VGQ24_08035"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEV8454825.1"
                     /translation="MKRLGTALIVFLMALAPAVPAFAKDQWVVSFGDEPFTLNPAARG
                     ALAVTSDYVQIHIFDGLIDFTGPDLTLKPMLATRWENPSPTTWRFYLRRGVKFHNGDP
                     LTAEDVKFTIETQLANKGSTVNSFLGPTESVRVIDPYAVEITTQRPFPPLLVNLSRLH
                     ILPRAYEK"
BASE COUNT          947 a         1814 c         1887 g          897 t
ORIGIN      
        1 cgcgcgtgga tgggtcgcgg atgaacttga actgcagccg ctgcggcgac gcgcccgggc
       61 cgccccagta ggcctcgttg gccgcgagcc gcaccggctg gtcacgggtc cagtcgctgg
      121 caagcctgta cattcccgtg cccacgggcc gcttcccgaa cacctcctcg cccatgctgg
      181 cgcgagacct gggaacgacg aagagcacct gggcgatgtt cggcatcagc gacgccaaca
      241 cgcccttcgt ggtccagcgg atggtgtggg cgtcgagctt ctccagcttc tccaccgggt
      301 cgaacacgta accggtgccc agcttggcgt tgctcttgtg gccctggtag gtatacagca
      361 cgtcgtcggc ggtgaagtcc tcgccgttgt ggaacttcac cccccggcga agcttcatct
      421 ccagggtgtt ctcgttgacg tagtgccatg actccgccag gcgcggcgtc ggggtgaagt
      481 tcggcccctc gtagccgacc agagtgtcga agatgtgata aaagacgtcg tagtagatgg
      541 cgccgctggt ggtggcgagc gggtcgagcc cggagatatc ttcggagaag gcgatcaccc
      601 actcgccgag ctgggacttg gcggcggcga gctcggccgc ctgagcgcgt gcgatcgggc
      661 tcgcgggcgc ggcctgctcg cagacggcca acagggcccc cgtgctcgtg accagtgaga
      721 cgcgcatgaa cgctcgccgt gacagtctcc gggacgcctc tgagtcggcc atggttaccc
      781 tcccgcgcct cctggccggc gattctagcc tgtaacgact cgtcatagtg gtgtcagcgc
      841 cggaacgaga gggcttcgtc aggccggaca ggcccaacaa cccatcggct ataatccagc
      901 cacggttcat aaccgcgacc caacaggagg ctccccgtgc gcctcgagtt ggccagctac
      961 cccgtccatg aggtggtgtt cagcaaccgc accgagtacc acgacggcgt gctgcgggtg
     1021 gatcaggccg gtgtggaggc gtggctggcg caggatccgg cgctgggcag cgtccggctt
     1081 tcgctcgcgt gccccggtga tcgcgcccgc atcatccacg tgctggacgt gctggagccc
     1141 cgctgcaagc ccgggtggcc gggcgcggcc ttcccgggcg tgctggggcc ggcagacgcc
     1201 gtcggtcacg gccgcacgtg ctgcctggcg ggcctggccc tggtgcagac cggccagttc
     1261 cagcgcaccg aggggctgca gatgatgcgc gagagcatcg tcgatatgtc cggcccggcc
     1321 gcggagatca ttccgttctc tcggaccata aatctggtag tcagcttcga ggcagccccg
     1381 ggcgtgggga acgcggagtt cgaccatgcc atccgggtgg ccagcgcgag gctggcggag
     1441 gccttggccc acgccaccgc gggccaggag ccggtcgacg tgcggaccta cgagcaggcc
     1501 gagcctcgcc aggacctgcc gagagtggtg tggatctgca tggtgcagtc gctggggctg
     1561 ctggagcaca cgctggtgta cggcgaaagc acggtgggca agctgccgat gccgctgttc
     1621 cctgccgatg tgctggacgg agcggtggtc agtggcaact tccttttcgc ctgccagcgc
     1681 aaccgcacct acctctacca gaacagcacg ctcctcgagg agctgttcgc cctcggcggc
     1741 cacgagctga gcctggcggg ggtgatcatc gctccatcgt cgcgccacac ccttcccgag
     1801 aaggagcggg cggcggacct cgccgccagg accgccgccc tgctcggggc gaacgcggcg
     1861 gtcatcaccc aggagggcgg cggccacgcc ggggtcgact tcatgctggt gtgcaaccgc
     1921 tgcgagcggc ggggcatcaa gacggtgttg gtgaacaacg aggccaccga cgccgagggg
     1981 acggacacca gcttcgtgta cgtggtgccg gaggcggacg cgatggtgag cacgggcaag
     2041 acggaggagc tgatcgccct gcccgcgatg gaacgggtga tcggcggcca ggtgctggaa
     2101 ctcgaagaag tgcagcagcc tgccgccgag gcgttcacca ccagcctgcg ccctctgtgt
     2161 tgcgccacca gccagatggg cgagacgcgc ctgacggtct cgcagtactg agcgacgaag
     2221 gagcgccatg ggtaccggcg aacagcgcac cgtgcgagtc gtccactacc tgaaccagtt
     2281 cttcggcggg atcggcgccg aggaggccgc ggggcacggc gtggaggtgc gccgcggccc
     2341 ggtcggcccg ggcctggctc tccagaaggc gttggccgag cggggcgagg tgatggacac
     2401 cgtcatctgc ggcgacaact acttcgccga gcatgagctt caggcgctcg agcggatcct
     2461 ggcggcgatc gtcggggctc agccggacgt ggtggtcctg ggtccggcgt tcaactctgg
     2521 acgctacggc cgggcctgtg gcgcgatcgg acgggcggtc gtcgagcggc tgcgggtgcc
     2581 ggcggtgacc ggcatggacc cggagaaccc ggccgtggag gagttccgcc gctttcttta
     2641 catcgtccct acggccgcca cggcggtggg catgggcccg gccatttccc gaatcgcggc
     2701 gctggcggtg cggctggtga gcgggcagcg gatcggcccc gccgaagagg agggctacct
     2761 gccgcgtggc ttccgccgca acgccctggc cgccgagcgc ggcgcgcagc gggcggtgcg
     2821 gatgctgctc aagaagattc gcggcgagcc ctatcgcagt gagacgccgc tgccctgctt
     2881 cgatcgcgtg gagcccgccc agccgctgtc agacctgtcg caggccacca tcgccatcgt
     2941 gaccgaaagt ggggtggtgc cccggggtaa tcccgacagg ctggaggctc acgcggcgac
     3001 ccactgggtg cgctacccca tcgccgggct gcgcgagctg acccgcgaga gcttcgactg
     3061 cgtccacggc ggcttcgacc cctccaacgc caaggccgat cccaaccgcc tggtgccgct
     3121 ggacgtgctg cgcgacctgg aagcacgggg gctcattggc aagctgcacg agtacatgta
     3181 cgtgaccgtc ggcaacggca tgccggtcct gcgcgcccgc gagttcgccc acgagatcgc
     3241 cggggagctg aaggcggccg gcgtgcaggg cgtggtgctt cccgccacct gagggaccgg
     3301 cacgcgttgc ggcgcaacgc tggccaagga gctggagcgg gagggcctgc cgaccgtgct
     3361 attcaccgcc atggtgagcg tggccaccac cgtgggcgcc aaccgcatcg tccgtgggac
     3421 cgccatcacg cacccgctgg gcgaccctct ccgcccgccc gaggacgagc gctcccggcg
     3481 cgagcggatc gtgcaagcgg gcatggacgc cttgcgggtg accccgcggg agggcgagat
     3541 cttcgagccg gaggcgtgag gtcatgagcc aaggtaggcg tcgatccaca tttgaagcgt
     3601 cagatcgtgt atctcagggt cgccaataat aattggccga agttccttct gataccgagt
     3661 tctgaggatt tcacgatcca gcggtagcac cttggcgagg tgagcaacgt cctctcgatc
     3721 caccgggctg tttcgagcga gtttggacaa cgccaggtca tgaccttcaa ggtcgaagag
     3781 ccggagcttc tcgaagcgac ccgggaagag ctcgatcagg cgctgaacat acgattccgg
     3841 aaggctggcc actccaacgt gctggaagga caagtgatac ttcttcgcca acggtgactc
     3901 cggccctgca agacgctgaa gaccctgcat ggcatggcgg ggaatgatct cgatgtagtc
     3961 gaggtcgcct gtcggccgag gaagatggta ccggaccgcc acgacgaatc cgccaagaca
     4021 atggagttcg atggggtccg gaaggagcgc gtccaccgct gcgagaaacg tatcccaggg
     4081 ccgaggcagc tcaggcgaag cggagggcat cagccgtcca gtcgctcagg acgttccacc
     4141 gcttggcttc cggagaccga tggtccacca gccatcgccg ctctgcctcg ggcagtgatg
     4201 ccctacacaa cgtgtcctca cgagcaagac ggcttcgttc gagcaccgtc tcgaactcct
     4261 ccaacgttcg ggcccgaggc tggtctccag cacgctccgc aagtcggcgc gccaaggtga
     4321 cgacaaggcc gagacgattc tgaaggtctc gaagcttcgc ttcgcgtacc agccaatcat
     4381 ggtccagagg ccaaaatgtc agtacgagcc aggggagggc ctcgacgaga cgagactcca
     4441 gatcgtcccg agcgagagca ctgaggagaa cctcgccggg atttttaggc ttccaattcc
     4501 ggggtcgcag atatgccagt cctgggtacc ccaatgcagc aagatcgccg gccagagttt
     4561 cagaagccgt ttggttgctc gcgacgctca attccgaagg cggcagggcg gtcggagcga
     4621 gatcgtagac cctcatcgca cgccgagcga gttcgggcgt caagcggcgg actccgccct
     4681 cgagcatcgc caggtaggac tgcgacacct tgaggcgccc cgcagcctct acctgactca
     4741 agcctttggc gagccgccca gtcttgagat tcgtagagtt catcacgcct gaatattatc
     4801 acaatatttg tgataatcag ggtcgctttc tgcccaaaca aaatcgggca cgacctggcc
     4861 aagaatacgc cctgcgtctt tccgttgcgc cccgatgttc aggggttcca gttcggcaga
     4921 ccgcgcgagc gttgtgatcc ggcccccgaa gctcgagcgc ggttgaccgt cgttagaagc
     4981 tcgtgctatg tccgatctgc accaggcccc ggaggcagcg tgagagagga gccgccgcac
     5041 catgaagagg ctcggaacgg ccctgatcgt cttcctgatg gcgctggcac cggcggtccc
     5101 cgcattcgcc aaggaccagt gggtggtctc cttcggcgac gaacccttca cgctcaatcc
     5161 cgccgcgagg ggcgcgctcg ccgtcacgtc cgactacgtg cagattcaca tcttcgacgg
     5221 cctgattgac ttcaccgggc cggacctcac gctgaagccg atgctggcga cccgatggga
     5281 gaacccgagc cccacgacgt ggcgcttcta cctgcgccgc ggggtgaagt ttcacaacgg
     5341 ggatccgctc acggcggagg acgtgaaatt caccatcgag actcagctcg ccaacaaggg
     5401 cagcaccgtc aactcgttcc tgggcccgac ggagagcgtc cgggtcatcg atccctacgc
     5461 ggtcgagatc accacgcagc ggccgtttcc gccgctcctg gtcaacctct cgcggctcca
     5521 catcctgccg cgcgcgtacg agaag
//
LOCUS       DASYRV010000309         3630 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3386622, whole genome shotgun sequence.
ACCESSION   DASYRV010000309 DASYRV010000000
VERSION     DASYRV010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3630
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3386622"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..446)
                     /locus_tag="VGQ24_08040"
     CDS             complement(<1..446)
                     /locus_tag="VGQ24_08040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454826.1"
                     /translation="MLDNSHSVMAEGTDVGIIGGLAVALWFLILDTIAGHPFQTPSLL
                     GQVVLFGDSTPDTSHLVFGAILVYTAFHFAVFALLGMGLVVLVHWGERDSVVRYALLP
                     VFLVFEVMFYGLLEVFSERTNELFPFWAVVTANTLAAVSMGLYLWY"
     gene            complement(492..1028)
                     /locus_tag="VGQ24_08045"
     CDS             complement(492..1028)
                     /locus_tag="VGQ24_08045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454827.1"
                     /translation="MDHQHHSTLREGLLTGVIGGLIVAVWYVAYDLGRGQLGYTPNVL
                     GQVFVARDTMPAVRTIMPQAIAEYSLLHFGVFLLLGIVLAWLTHMAIRNPALRMGIWL
                     GLVIAFVFFFGLLFMLYSATDERFPWWSALGGSVLGIGSMGLYLWRRHPGLRRTFQEA
                     PLGDEVKPPLHPPGGSRR"
     gene            complement(1111..1437)
                     /locus_tag="VGQ24_08050"
     CDS             complement(1111..1437)
                     /locus_tag="VGQ24_08050"
                     /inference="COORDINATES: protein motif:HMM:NF017922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HEV8454828.1"
                     /translation="MNPIPHAINRRDDGLLIEWDEHGHTGFFPARSLRLACPCAGCVE
                     EMSGRPLLDPARVPPDIRPASLQLVGAYGLRVNWSDGHGTGIYTFEQLLRSCPCPRCR
                     GQPALE"
     gene            complement(1513..2406)
                     /locus_tag="VGQ24_08055"
     CDS             complement(1513..2406)
                     /locus_tag="VGQ24_08055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEV8454829.1"
                     /translation="MTIKARSKRRPVRPAQIARAIDEGRESLDLYLDEISRVPLLNRE
                     EEMELARKAFKGNVTAQERLARHNVRFVVSVAKKFQNRGVPLVDLIGEGNLGLMTAAR
                     KFDPDRGVKFISYAVWWIRQAVQAAIARHGRPVRVPLNRTADLSRLGRTTTLLKDRLG
                     RMPTTEELARATGLTVEAVRSLSALNSEAVRLDHPTRDGEGNERIERFTSGEQESTDM
                     TTMANSQTRDIEAALAALPPRDAKVLRLYFGLDDGNSRTLEEIGRMMGVTRERIRQLR
                     DRALLRLREGETGERLRDLVA"
     gene            complement(2679..3326)
                     /locus_tag="VGQ24_08060"
     CDS             complement(2679..3326)
                     /locus_tag="VGQ24_08060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454830.1"
                     /translation="MRLPAVSLVLLLAAAPAVRAQDCIEQVKFPKVGRWAEYKALYNG
                     KDPYTVRYAVIGSEKRSGADLKWVELRIVGEGKDKNFTYQVLVPGSPTEMANVQEIIM
                     KAGDKPAMKMNGMMVKMIRGQLDKQNFLAEVCREVTLVGEEKVTVPAGRFQARHFHSA
                     KYGSDTWVASSVPFALVKSVGKNYQMELAVHGNGAKSSISEQPQEMPGMGGPSSR"
     gene            complement(3380..>3630)
                     /locus_tag="VGQ24_08065"
     CDS             complement(3380..>3630)
                     /locus_tag="VGQ24_08065"
                     /inference="COORDINATES: protein motif:HMM:NF014307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HEV8454831.1"
                     /translation="VVGANDVVNPAARTDKNSPIFGMPIINADRARTVFAIKRSKNPG
                     FAGIDNELYFSERTWMLFGDAKNVVGDLVKQLSGGGTH"
BASE COUNT          729 a         1140 c         1106 g          655 t
ORIGIN      
        1 ttgtaccaga ggtacagacc catcgatacc gcagcgaggg tgttggctgt gacgacggcc
       61 cagaagggga aaagctcgtt ggttcgctcg gagaagacct cgagcaaacc gtagaacatc
      121 acttcgaaga caagaaagac cggaaggaga gcgtatcgga ccactgaatc ccgttcaccc
      181 caatgcacca gcacgaccag ccccatcccg agcagcgcga acaccgcgaa atgaaaggcg
      241 gtatagacca gaatcgcccc gaacacgagg tggctggtgt cgggcgtcga gtcgccgaag
      301 agcacaacct ggcccagcag gctgggagtc tggaaggggt ggccggcgat cgtgtcgagg
      361 atcaggaacc agagcgccac ggccaggccc ccgataatgc cgacgtcggt cccctccgcc
      421 atgaccgaat gggagttgtc cagcatgggt acacattggg ggaggcgtct ccagagcgca
      481 agacgggaga gttaccttct ggagccgccg ggcgggtgaa gtggcggttt gacctcgtcg
      541 cctaaaggcg cctcctggaa ggttcgccgc aggccggggt gtcgccgcca gaggtacaaa
      601 cccatcgagc cgatccccag tacgctcccg ccgagcgccg accaccacgg gaatcgctcg
      661 tcagtggcgg agtacagcat gaacaggagg ccgaagaaga acacgaaggc gatcaccaag
      721 ccgagccaga tccccatccg cagcgccgga ttacgaatgg ccatatgggt cagccaggct
      781 agtacgatgc cgagcagcag gaacacgccg aaatggagca aggagtactc ggcgatcgcc
      841 tgaggcatga tcgtccgaac cgccggcatc gtatcccggg ctacgaagac ctggccgagg
      901 acattggggg tgtagcccag ctggccacgt ccgagatcat aggccacata ccagaccgcc
      961 acgattagtc ccccgatcac gccggtcagg agtccctcgc gcagtgtcga atggtgctgg
     1021 tgatccatgg ctgccccctg tttgaaacgg cgacggctgc gtccgccggt acagattgtt
     1081 ccgagagcaa ggagtgggat gtgtccgagg tcactccaat gcgggctggc ctctgcagcg
     1141 gggacagggg cagcttcgga gcagctgctc gaaggtgtag atccccgtcc cgtgcccatc
     1201 gctccagttg acgcgcagac cgtaggcgcc gaccaactgg agcgacgccg gccggatatc
     1261 gggaggcacc ctggcgggat caagcaacgg gcgcccgctc atctcctcga cacagccggc
     1321 gcagggacac gccaggcgaa gtgaacgagc aggaaagaat cccgtgtgcc cgtgctcgtc
     1381 ccactcgatg aggaggccgt cgtcgcgccg gttgatggcg tgggggatag ggttcataag
     1441 aaaccctcca gacatcggag ggtttctgaa catcggagca cccagcagcg aatagccaat
     1501 agctaatagc ccttacgcaa ccagatcccg cagccgctct ccggtctcgc cttcgcgcag
     1561 tcggaggaga gcgcggtccc gaagctgacg gatccgctca cgggtgaccc ccatcatccg
     1621 gccgatctcc tcgagtgtcc ggctgttacc gtcgtccagc ccaaagtaga gccgaagcac
     1681 cttggcgtcc ctcggcggga gggcggcaag agccgcctcg atgtcccgcg tctggctgtt
     1741 ggccatggtc gtcatgtcgg tgctttcctg ctcaccgctg gtgaaccgtt cgatccgctc
     1801 gttgccttcg ccgtcccggg tgggatggtc gagccggacc gcctcggagt tgagggcact
     1861 gagggaacgc actgcctcga cagtgagccc ggttgcacgg gccagctcct cggtggtcgg
     1921 catccgaccc agccgatcct tcagcaaggt cgtggtccga ccaagccggc tgagatccgc
     1981 cgtccggttg agcggtaccc ggacgggacg gccgtgccgt gcgatggcgg cctgcaccgc
     2041 ctgccggatc caccacaccg cataggaaat aaactttacg ccgcggtcgg ggtcgaactt
     2101 ccgggccgcg gtcatgaggc cgaggtttcc ctcgccgatg aggtccacca gcggcacccc
     2161 acgattctgg aacttcttgg cgactgagac cacaaagcgc acattgtggc gagccagcct
     2221 ttcctgggcc gtcacattgc ccttgaacgc cttgcgggcg agctccatct cctcctcacg
     2281 gttgaggagt ggaacccgac tgatctcgtc cagatacagg tcgagactct cgcggccctc
     2341 gtcgattgca cgagcgatct gcgccggtcg caccgggcga cgcttgctac gtgccttgat
     2401 tgtcacgctt ctagcctcct acgggactcc cgtcccccgc tcggttgcca gccacgactg
     2461 aggccgagcc aaatttaagt cggccaatat actacctaag atacgaaaaa tcaacacctt
     2521 aggtaaacta tggcgggatg gagagttgcg gcgacgattc acaaacgaca gtcaccacac
     2581 gttggtgtat gcaactttgg cagtcccaca cccggctgtg accattataa tgtgccagtc
     2641 tgaaacgaac tgcagggtaa cccgcagagc gtcgcctgtt atctgcttga tggacctccc
     2701 attcccggca tctcttgggg ctgctcgcta atggacgact tagccccgtt gccatggaca
     2761 gccagctcca tttggtagtt cttccccacc gacttcacca gggcaaacgg aacggatgag
     2821 gcgacccagg tatccgagcc gtacttggca ctgtggaaat gccgggcctg gaaccggccg
     2881 gccggaacgg tgaccttttc ctcgccgacc agggtcactt ccctgcagac ctcggccagg
     2941 aagttctgct tgtccaactg gccgcggatc atctttacca tcatgccgtt cattttcatg
     3001 gcgggcttgt caccggcctt catgatgatc tcttggacat ttgccatctc ggtgggcgac
     3061 cctggtacca gcacctggta ggtgaagttc ttgtccttgc cttctcccac tatccggagc
     3121 tcgacccatt tgagatcggc cccgctccgc ttctcgctcc cgatgacggc gtagcggacc
     3181 gtataggggt cctttccatt gtagagcgcc ttgtactcgg cccagcggcc gaccttggga
     3241 aatttgacct gctcgatgca atcctgggcc cggacggcag gagctgcagc cagcaggaga
     3301 accagtgaaa cagcgggcaa tcgcatgacg gcctcagggc tgagtaaacg gatgagcggt
     3361 cggcaggtgc actgagatct caatgcgtgc caccaccaga cagttgcttg accagatcgc
     3421 cgaccacgtt cttggcgtcg ccaaagagca tccaggtcct ctccgagaag tacagctcgt
     3481 tgtcgatgcc ggcgaatccg ggattcttgc ttcgtttgat ggcgaataca gttctcgccc
     3541 ggtcggcatt gatgatcggc atgccgaaga tcggactgtt cttatcggtc cgggccgcag
     3601 gattgaccac gtcgttggcg cccaccacca
//
LOCUS       DASYRV010000310         4109 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_958056, whole genome shotgun sequence.
ACCESSION   DASYRV010000310 DASYRV010000000
VERSION     DASYRV010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4109
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_958056"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1161)
                     /locus_tag="VGQ24_08070"
     CDS             complement(<1..1161)
                     /locus_tag="VGQ24_08070"
                     /inference="COORDINATES: protein motif:HMM:NF015563.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HEV8454832.1"
                     /translation="MKKIRFPHPLALLVGCVIVAAALTWLLPAGRFERREDPDTGRSV
                     VVPGTYSRVEPHPVGPFQAMVAIPKGIVDAASVIGLVFLIGGGFTVVERTGTFGRLVN
                     GFARRLKGRGILVIPAASVAFSLGGIMMQMQEELIAFVPVLLLLVRQLGFTPLTAVAM
                     SLGAAAVGAAFSPVNPFQVIIAQKVAELPPASGLGFRLAFLVPAIACWIWGTVHYARR
                     TRVPPQEVPEGQGAPLDRRDVAVLLSIVAAFGIYIYGAQTLGWEFDELAALFFSVGLL
                     AGLFRGLGIGGTAEAFADGFRSMAFAGLLIGFARAIYVVLNEGQIVDTLVHGMFTPIA
                     GLPAILSALGMMFIQAAIHLPVPSTSSQAVLTLPLLVPLSDLIGLSRQVTVLA"
     gene            complement(1158..1430)
                     /locus_tag="VGQ24_08075"
     CDS             complement(1158..1430)
                     /locus_tag="VGQ24_08075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454833.1"
                     /translation="MTARARFLSLLVLLAFAAFLLWSTLSSQRVECSVTVAFGGGRNS
                     ATASAAAEPDAVREAQTAACGPLATGMNERIACGRIPPISRHCRSL"
     gene            1548..1772
                     /locus_tag="VGQ24_08080"
     CDS             1548..1772
                     /locus_tag="VGQ24_08080"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEV8454834.1"
                     /translation="MQCKEVLICLWEYLDEELRPEEAEAVAAHLSHCGACYPAYCCDR
                     ALLDLLARQRTACSAPAALVRSIRVQLKVS"
     gene            complement(1794..2117)
                     /gene="cutA"
                     /locus_tag="VGQ24_08085"
     CDS             complement(1794..2117)
                     /gene="cutA"
                     /locus_tag="VGQ24_08085"
                     /inference="COORDINATES: protein motif:HMM:NF015077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010038 - response to metal ion [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent-cation tolerance protein CutA"
                     /protein_id="HEV8454835.1"
                     /translation="MTGCCQVTTTLPDRAVAEHLAATLVAERLAACAQVLGPVASTYR
                     WKGEVEHAEEWYCHLKTTLGRLPELQKRMRELHPYEVPEVIAVPISHGDEEYLAWVRE
                     EVKEP"
     gene            complement(2154..2498)
                     /locus_tag="VGQ24_08090"
     CDS             complement(2154..2498)
                     /locus_tag="VGQ24_08090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454836.1"
                     /translation="MKRFFGAVMLLTALTSCRDYDFHSRLTSQEGLVPADQFARYGRE
                     QAEAMAIAREFGAAIKRSSPEDLAKQAEVVSRYARTIADVADVQADPLGYRITLRFKS
                     GWRTMVTPIEDR"
     gene            2577..3329
                     /locus_tag="VGQ24_08095"
     CDS             2577..3329
                     /locus_tag="VGQ24_08095"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEV8454837.1"
                     /translation="MRRQRRGSVPLFLAVCVLTHPLTATAQLNGLPPVQHSVSVRWWH
                     GAVVLGGLSALMLLDQPAHDFAQNNRSIRSNDVAGALRHLGQPEVFGTVTLGLLGAGL
                     ISGNDEITRAGGRLAATVALAGVASTGLKYATGRPRPNESSDADGFKPFSGQDAMPSG
                     HTTVAFAFATALADDIHRTWASVGLYTLATGVGWSRMNDNKHWLTDVAAGAVLGITSA
                     KVMNGHWRIFNLRPPTVLLGPRHAGIAWQLTF"
     gene            3334..3702
                     /locus_tag="VGQ24_08100"
     CDS             3334..3702
                     /locus_tag="VGQ24_08100"
                     /inference="COORDINATES: protein motif:HMM:NF012354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEV8454838.1"
                     /translation="MPASKPSALRRHLAPRQKVWLNWDGVFLMGPNYLRFLAAVDRTG
                     TIREGGQAVGWSYRTCLNRLRRMERVLGAPILITTRGGSSGGSARLTPAARRLVKVFT
                     RWQREVERLTRRAFREAVER"
     gene            3779..>4109
                     /locus_tag="VGQ24_08105"
     CDS             3779..>4109
                     /locus_tag="VGQ24_08105"
                     /inference="COORDINATES: protein motif:HMM:NF019042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEV8454839.1"
                     /translation="MFAGLVLCCFVAPLVAQTPTKPAAAGPWVKLSGYIQAREIYQSK
                     IGVTSSINRARLAASGSLIEAVTWRIQGEFRTGSVGTGKASVSLTDGYVRYAPQSWAV
                     QIGQFKTP"
BASE COUNT          753 a         1352 c         1303 g          701 t
ORIGIN      
        1 cgccagcacc gtgacctgac gggacagccc gatcaggtcc gataacggca ccaggagtgg
       61 gagagtcaac acggcctggc tgctggtgct gggcacggga agatgaatgg cggcctggat
      121 gaacatcatc cccagggcag acaggatagc gggcagaccc gcgatcggag tgaacattcc
      181 gtggacgagc gtgtcgacga tctgcccttc attcaagacc acatagatcg cccgggcgaa
      241 cccgatgagc aatccggcaa acgccatcga ccggaacccg tcggcgaagg cctccgcagt
      301 tccaccgatc cccagccccc gaaacaagcc cgccagcagc cccacgctga agaagagtgc
      361 cgccagctca tcgaactccc acccgagagt ctgggcgccg tagatgtaga tgccgaaggc
      421 agccacaatc gagagcagaa cggcgacgtc tcgccggtcg agtggcgccc cttgaccctc
      481 ggggacttcc tggggcggaa cccgggtccg cctggcgtag tgcacggtgc cccagatcca
      541 gcaggcgatg gcggggacca gaaacgccaa ccgaaacccc aggccggagg ctggaggtag
      601 ctcggcgact ttctgggcaa tgatcacctg gaacggattg acggggctga aggcagctcc
      661 tacggcggcg gcacccaagc tcatggctac cgccgtcagt ggagtgaatc ccagttgacg
      721 taccaggagc agcagcaccg gcacgaacgc gatgagctcc tcctgcatct gcatcatgat
      781 gccacccagg ctgaacgcca cgctcgccgc ggggatcacc agaatgccgc gccccttcag
      841 ccggcgagcg aagccattga ccagccgtcc gaacgtgccg gtccgctcca ccacggtgaa
      901 cccgccgcca atgagaaaca ccaacccgat gacggaggcg gcatccacga tgccctttgg
      961 gatcgcaacc atcgcctgga atggacccac cggatggggc tcgacccggg agtaggtgcc
     1021 gggcacgacc acgctccgtc cggtgtccgg gtcctcccgt cgttcgaacc tgccggcagg
     1081 cagcagccag gtgagtgcgg cggccacaat gacgcacccg acgagtagtg ccaggggatg
     1141 ggggaagcgg atcttcttca aaggctccgg cagtgccggc taatcggagg aattctgcca
     1201 caggcgatgc gctcgttcat cccggttgcc agcggcccgc acgcagcggt ctgggcctcg
     1261 cggacggcgt ccggctcggc ggcggccgac gcggtggcgc tgttccggcc tccaccgaaa
     1321 gcgaccgtta ccgagcactc cacccgctga gatgagagcg tggaccagag cagaaatgcg
     1381 gcaaaggcga gcagcacgag cagcgacagg aatcttgctc gagcggtcat gctccctccc
     1441 ctcggggtgg ggcagcccgg gtccggcccc agaggaacca agtagccggt cctgctgttc
     1501 ttttgccaag catccgcaag gagagacgtt gcgaagggga aagatgcatg caatgtaagg
     1561 aagtcctgat ctgcctctgg gaatatctgg atgaggagct caggccggaa gaggccgagg
     1621 cggtggcggc ccatttgagc cactgcggag cctgctatcc cgcctattgc tgtgaccgcg
     1681 ccctgctcga tttgctggcg cggcagcgga ctgcatgctc ggctcctgcc gctctcgtca
     1741 ggtccattcg ggtacagctg aaggtttcgt gaagcagagc cgacctcgat cggtcacggt
     1801 tccttcacct cttcccggac ccacgccagg tattcttcat cgccatggga tatagggacg
     1861 gcgatgacct ccggcacctc ataagggtgc aactcgcgca tccgcttctg cagctcaggt
     1921 agtcgcccaa gggtagtctt caggtggcag taccattcct cggcatgctc cacctcccct
     1981 ttccagcgat aggtgctcgc aaccggcccg agcacctggg cgcacgcggc gagccgctcc
     2041 gcgaccaatg tggccgccaa atgttcggcg accgcccggt cgggcaaggt agtcgtgacc
     2101 tgacagcagc cggtcacgtc agaactcccc ctggtgcgat cgttatattg cgcttaccga
     2161 tcctcgatcg gggtgaccat cgtccgccac ccgctcttga agcgaagagt aatccggtag
     2221 cccagaggat ccgcctgaac gtccgcaaca tccgcaatgg ttcgcgcgta ccgcgagacc
     2281 acttccgcct gtttggccag gtcctcgggc gacgatcgct tgattgcggc accgaactcg
     2341 cgggcaatcg ccatcgcttc ggcttgctcg cgcccatacc gggcgaactg atcggccggg
     2401 accaggcctt cctgactggt gagccgagaa tggaagtcat agtccctgca tgacgtgagc
     2461 gccgtcaaca acatcacggc accaaagaat cgcttcatga caagtcctcg agctgaggtc
     2521 gcggcccggt gagaactacc acgcccgaag gtaattcgtc tgatgctgga gtaggagtgc
     2581 ggcgccaaag aagggggtca gtcccgcttt ttctcgcggt ctgcgtcctg acccatccac
     2641 tgacagccac ggcacagttg aatggcctgc ctccggtcca gcactctgtc tccgttcgct
     2701 ggtggcatgg ggcggtcgtg ctgggtgggc tctccgccct gatgctcctg gaccagccgg
     2761 ctcacgactt cgctcagaac aatcgctcga tccgctcgaa cgatgtggcc ggtgccctgc
     2821 gtcatcttgg ccagccggag gtgttcggca ccgttaccct cggcctgctt ggtgctggac
     2881 tgatcagcgg caatgacgag attacccgag ccggcggccg tcttgcggct accgtggcgc
     2941 tggcgggggt cgcctcgacg gggctcaagt acgcaacggg tcggccgcgg ccgaacgaga
     3001 gctccgacgc cgatggattc aaacccttct cgggccagga tgcgatgccg tcggggcaca
     3061 cgactgtggc ctttgccttc gcgacggctc tggccgacga tatccaccgc acctgggcca
     3121 gcgttggact gtacactctc gcgaccggcg taggctggtc acggatgaat gacaacaagc
     3181 actggctcac cgacgtggcc gccggcgccg tcctgggcat cacctcggcc aaggtgatga
     3241 acgggcattg gcgcatcttc aatctgcgcc ccccgacggt gctgctcggt ccccgacatg
     3301 ccggcatcgc ctggcagctc acgttctgag gccgtgcccg cctcgaagcc gtccgctctt
     3361 cgccggcatc ttgcaccgcg ccagaaagtc tggctgaact gggacggggt cttcctgatg
     3421 ggccccaact atctccgttt tctcgccgct gtcgatagga ctggcaccat ccgggagggc
     3481 gggcaggcgg tcggctggag ctatcgcacc tgtctcaacc gtctgcgccg gatggagcgc
     3541 gtgctcggcg ctccaatcct gatcaccacc cggggcggga gctccggcgg cagtgcccgg
     3601 ctcacgcccg cggctcggcg gctggtgaag gtattcaccc gctggcagcg cgaagtcgag
     3661 cggctaactc gccgggcttt tcgggaggcg gtggagcgat aggcaaggcg ttgcctatcg
     3721 acacggctag gagtaggttg ggctgtctcc ttcatcggca gcccacatgc gcttgcgtat
     3781 gttcgctgga ctcgtgctgt gctgttttgt agctcctctc gtcgcacaga cgcccaccaa
     3841 gccagccgca gccggtccct gggtgaagct gagtgggtac atccaagccc gcgaaatcta
     3901 ccagagcaag atcggggtca cgagctcgat caaccgggca cggctcgccg cctccggcag
     3961 ccttatcgaa gcagtcacct ggcgcattca aggcgagttc cgcaccggtt cagtggggac
     4021 tgggaaggcc agcgtgtctc tcacggacgg ctatgtgcgg tatgcccctc aatcatgggc
     4081 cgtccagatc gggcagttca agacgccct
//
LOCUS       DASYRV010000311         6853 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3387215, whole genome shotgun sequence.
ACCESSION   DASYRV010000311 DASYRV010000000
VERSION     DASYRV010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6853
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3387215"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..707)
                     /locus_tag="VGQ24_08110"
     CDS             complement(<1..707)
                     /locus_tag="VGQ24_08110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HEV8454840.1"
                     /translation="MEQRRVVITGIGAITPIGLGVEGLWEGLRRRVSAVRCITRFDPS
                     VFKSRIAGEVGEFVATDHMEQRRARRLDRFSQFSVAATRMALADAHLVPSREDPDRVG
                     AMMGTALGGVAHGESQYHQFMTGGPRAVDPGLALTVFAGAASCNIAIEFGFTGPNSTN
                     GMSCASGAIAIGEGFRAIVRGEVDVMVAGGAEAPLAPLCFGAFSIIRAMSTRNEDPAR
                     ASRPFDAGRDGFVMAEGA"
     gene            complement(877..1341)
                     /locus_tag="VGQ24_08115"
     CDS             complement(877..1341)
                     /locus_tag="VGQ24_08115"
                     /inference="COORDINATES: protein motif:HMM:NF015331.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEV8454841.1"
                     /translation="MRIVDRLGMKAPIDRVFRAAMDVEQWPALLSHYRWVRMLERRPG
                     GGLVEMAAWRPFGWFKYPTWWVSEMWIDPGEGAVRYRHVRGITAGMDVVWRLDPIEGG
                     TEVTIVHDWQGPRWPLVGQAAASLVIGPVFIHGIASRTLAGIARHVEDAVRR"
     gene            complement(1341..2039)
                     /locus_tag="VGQ24_08120"
     CDS             complement(1341..2039)
                     /locus_tag="VGQ24_08120"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEV8454842.1"
                     /translation="MGILSITGLGTELLDQPDADPAVVAESLRNIARANRWFGGAAAV
                     RFGLARTLQDVPAGSTLSLLDLGTGLGDLPRAAVRWGAARGIRVVPIGLELNRSAAAL
                     ARTSGLATAVACAGVPPVRDKAVDIVLVSQVAHHLTHASVVHLVRTCDRLARRAVILA
                     DLRRHPLAPPSFWCGARLLGFDPVTVADGMTSLRRGFTRPELESLLASAGVAGRVERR
                     PGFRLVATWVPQGN"
     gene            complement(2042..2524)
                     /locus_tag="VGQ24_08125"
     CDS             complement(2042..2524)
                     /locus_tag="VGQ24_08125"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HEV8454843.1"
                     /translation="MSPAEIDPFQFRQLLGRFATGVTILTLATPEGRPLGMTANSLAS
                     VSLQPPLLSVCVDREAEMHDVILEAPEFVVNVLASPQEALARRFSDKHEDRFDGVGYH
                     LSSEGLILLDSVLAHIVCERHATYPAGDHTIVLGRVVGGATSDERPLLFYRGGYAALG
                     "
     gene            complement(2521..3747)
                     /locus_tag="VGQ24_08130"
     CDS             complement(2521..3747)
                     /locus_tag="VGQ24_08130"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEV8454844.1"
                     /translation="MSAESGGQVDVLVAGAGPAGSATATLLARAGISVLVVDRAAFPR
                     DKACSEYMSPEAVRILARLGVVEILERAGAFPLEGMKVTGPRGATAHGKFALAGHHPF
                     RPTGLSISRRILDNQLVAAARAAGATVLERTRVEELLYERGGVAGAVIRDHRGQRRSL
                     RARLTVGADGLRSVVARRLGRRNYGTPSRMAFVAHVARVSGMGPSAELHFREYGYMGL
                     NQIGQDQTNVALVVPSERAARARGGVEQFFTETLGEFPGVRERVEAGEVVRPILATGP
                     FAVWSAKVIAPGALLVGDAADFFDPATGDGIYCALRGAELVAETAAAALSQPGPITVD
                     RLVEYRRLRRRVFSGKWMIERMIDYALRFPRLFDRGVSRLGRHEGMAHTIIGLAGGFV
                     PAREVLNPVFLARMVL"
     gene            complement(3763..4539)
                     /locus_tag="VGQ24_08135"
     CDS             complement(3763..4539)
                     /locus_tag="VGQ24_08135"
                     /inference="COORDINATES: protein motif:HMM:NF014049.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF92 domain-containing protein"
                     /protein_id="HEV8454845.1"
                     /translation="MPLPLAATVGAGVAWLGWRAQTLTSSGAIAAWTVGTLVLYGSGW
                     NGGAVLAAFFIASNLVSRIGLQRALVQLDPKGDRRDIWQVYANGGVAAAGAVAAPGEL
                     GIWLVTATLAAAAADTWATSLGTRSGTAPRLLGFGRTVPPGTSGGMTLIGSAGGALGA
                     LVVSGTGAVAAGLPMLLPVGTLIGFLGMVADSTLGTLLQGRFHCPACDVASEWRVHRC
                     GAATIREGGMAWLNNDGVNLAATALAGCAAVGVWRWLAPG"
     gene            complement(4545..4790)
                     /locus_tag="VGQ24_08140"
     CDS             complement(4545..4790)
                     /locus_tag="VGQ24_08140"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEV8454846.1"
                     /translation="MSRIDCEEALTHLHDYLKRELTPELVGEVQQHLERCRHCFTHAQ
                     FEESFFQKLQTCARHETCPRELRARILAALRAEARGS"
     gene            complement(4787..5356)
                     /locus_tag="VGQ24_08145"
     CDS             complement(4787..5356)
                     /locus_tag="VGQ24_08145"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEV8454847.1"
                     /translation="MAEPTEAGRSFDDEALPHLDALYRVALRLTADPSQAEDLVQDTM
                     LKAYRSWRQYRPGTNAKGWLLTILRNTFINDYRRRKHEPIAMDLEAVEPHALYRSMQE
                     SDPEGTFFSQIVDDKVLEAIDALPPDFREVLALSDIEGMTYAEIADTLQIPVGTVKSR
                     LFRARRQLQAQLYAHAVEMGYIQARESRT"
     gene            5439..6065
                     /locus_tag="VGQ24_08150"
     CDS             5439..6065
                     /locus_tag="VGQ24_08150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454848.1"
                     /translation="MPKPSVSALIPLSLLEAIRNLDTPVEDGLDELAEEIAVRRLGLS
                     PTVAAQIQRYRQSAERGVGVDLDETVSVFRLVGRRADAALVFADAGRRAARYAAKARS
                     RSSRTLIRLSPRPLARRLALRSVARLTRSIFDGELKARAHVVELRMSAPLSFVALPAG
                     EACLFYGSAYLEMLRALTGFEGALLHAHCRSRGNADCHWHTAVAEVYE"
     gene            6062..>6853
                     /locus_tag="VGQ24_08155"
     CDS             6062..>6853
                     /locus_tag="VGQ24_08155"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HEV8454849.1"
                     /translation="MIDLAELRQALAGAELDGWLLFDFHGLNPVADRLLDRTGMNTRR
                     LFVLLPREGEPVAIAHKIELQGLENFPGRVIPYARWSELHAALGSVVAGRKLAMEISP
                     DDAVPYLDRVPFGVVELLRRLGATVVPSGALVSRFAARWSRSEAEDHRVAAEILASVA
                     RETLARVVSQGGEGISESALQAQVVAAVEARGLVFDDPPIVAFGANSANPHYEPSPRA
                     TLQSGDVVLLDLWAGRSHTTVFADQTWIGFAGSRPPQQVAEVWRTV"
BASE COUNT         1134 a         2408 c         2247 g         1064 t
ORIGIN      
        1 gctccttcgg ccatcacgaa gccgtcgcgc ccggcgtcga atggtcggct ggcccgggcc
       61 ggatcctcgt tgcgggtgga catcgctcgg atgatggaga acgcgccgaa acacaggggg
      121 gcgagcggtg cctcggcccc accggccacc atgacgtcca cttcgccacg cacgatcgct
      181 cggaacccct cgccgatcgc tatggcgccg gacgcgcagc tcattccgtt ggtagagttg
      241 ggaccggtga agccgaactc gatggcgatg ttgcagctgg cagccccggc gaacacggtg
      301 agcgccagcc ccggatcgac ggccctgggt ccaccggtca tgaactggtg gtactggctc
      361 tcgccatggg caactccgcc gagcgctgtc cccatcatgg ctccaacgcg gtcggggtcc
      421 tcccgcgacg gaacgaggtg cgcgtcggcc agggccatgc gggtggccgc gacactgaac
      481 tgggagaagc ggtccagccg ccgggcgcga cgctgctcca tatgatcggt cgcgacgaac
      541 tcgccgacct cacctgcgat ccgcgacttg aacacggagg gatcgaaccg ggtgatgcag
      601 cgcacggccg acacgcggcg gcggagccct tcccagagcc cctcgacacc caggccgata
      661 ggagtgatag cgccgatccc agtgattacg acccgtcgct gttccatgtg tactccaggg
      721 cggtaaggcg gtaggccggt acggcggtag gctcctaccg gccgatctga ctccgacctt
      781 aactcctaca cccccagcct ctctcgcgtg tgaactcagt gctactctgc tgtcgcgctg
      841 ctcctgcacc gtctactgtc ttaccgtctt accgccttac cgccttaccg cgtcctccac
      901 gtgcctcgcg atcccggcta gggtccgcga cgctattcca tgtatgaaca ccggaccaat
      961 caccagagac gccgctgcct gaccaaccag gggccaccgg ggtccctgcc aatcgtgcac
     1021 gatcgtcact tcggtgcccc cctcgatcgg atcgagccgc cacacgacgt ccatgccggc
     1081 ggtgatgcct cgcacgtgac gatagcggac cgccccttcg ccggggtcga tccacatctc
     1141 cgacacccac caggtgggat acttgaacca gccgaacggt cgccatgcag ccatctcgac
     1201 cagaccaccg ccgggccgcc gctccagcat ccgcacccag cgatagtgac tgagcagcgc
     1261 cggccactgt tcgacgtcca ttgccgcacg aaacacacgg tctatcggcg ccttcatgcc
     1321 gaggcggtct acgatgcgca tcagttgccc tggggcaccc aggtggccac cagccggaac
     1381 cccggcctcc gttccacccg gccggcgacg cccgcgctgg ccagcagact ctcgagctcg
     1441 ggccgggtga aaccgcgccg gagggaggtc atcccatcgg cgaccgtcac cggatcgaat
     1501 ccgagcaggc gtgccccgca ccagaacgat ggtggagcga gtggatggcg gcgtagatcc
     1561 gccaggatca cggcccggcg agcaagccgg tcgcaggtgc gaacgaggtg caccaccgac
     1621 gcgtgggtca gatgatgggc cacctggctg accagcacga tgtctaccgc cttatcccgg
     1681 accggcggga cgccggcaca ggcgaccgcc gtagcgaggc cgctggttcg ggcgagcgcg
     1741 gcggccgagc ggttcagctc cagcccgatc ggaaccaccc gaatgccccg ggccgctccc
     1801 cagcgcacgg cagcccgcgg caggtccccg agtccggttc cgagatcgag cagcgagagc
     1861 gtgcttccgg cggggacgtc ctgcagcgtg cgagcaagac caaagcgcac cgccgccgcc
     1921 ccaccgaacc agcggttggc gcgggcgatg ttgcgcagtg attcggccac caccgccggg
     1981 tcggcgtccg gctggtccag cagctcggtg cccagtccag tgatagagag gatgcccatg
     2041 cctatcccag tgcggcgtag ccgccgcgat aaaagagtag cgggcgttca tcactggtgg
     2101 cgccgccgac gacgcggccc aatacgatgg tatggtcgcc ggcagggtac gtcgcatggc
     2161 gctcacacac gatgtgggcc agcacgctgt ccagcaggat cagaccctcc gaactcaggt
     2221 gatagccgac cccatcgaaa cggtcctcgt gcttgtcgga aaaccgtcgc gccagcgcct
     2281 cctgagggct ggcgagcacg ttcacgacga actccggagc ctcgagaatg acatcatgca
     2341 tctcggcttc acgatcaacg cagaccgaga gcagcggtgg ctggagtgac acggaagcca
     2401 ggctgttcgc ggtcatccca agcggccgcc cttcgggtgt agccagggtg aggatcgtga
     2461 cgccggttgc gaagcggccc agcagttggc ggaactgaaa ggggtcgatc tcggccggac
     2521 tcacaggacc atccgcgcca ggaaaaccgg attcaggacc tctcgcgccg gcacgaagcc
     2581 gccggccaat ccgatgatgg tgtgtgccat accctcatga cggccaagcc gggacacccc
     2641 ccgatcgaac agccggggga agcgtagcgc gtagtcgatc atgcgttcga tcatccactt
     2701 gcctgaaaaa acccgccgcc gcagtcgccg gtactcgacc agccgatcaa cggtgatagg
     2761 tccaggctgg ctcaatgccg cagccgccgt ttccgccacc agctcggctc ctcgaagcgc
     2821 gcaatagatc ccatcgcccg tggcgggatc gaagaaatcg gcggcatcgc ccaccaggag
     2881 tgcccccggc gctatgacct tggccgacca gaccgcgaac gggccggtgg cgagaatagg
     2941 ccgcaccact tcgccggctt cgactcgttc ccgtactccg ggaaactcac ccaacgtttc
     3001 agtgaagaac tgctccaccc cgccgcgtgc ccgagcggcc cgttccgaag gaacaaccag
     3061 agcgacattg gtctgatcct gcccgatctg gttgaggccc atatacccat actcgcgaaa
     3121 atggagctcc gcggacgggc ccatgcccga tacccgcgcg acatgggcta cgaaagccat
     3181 gcggctgggg gtgccatagt tgcggcgccc gagccgtcgc gccacgactg agcggagccc
     3241 gtcggccccc accgtgagcc gtgcccgcag cgagcggcgc tgccctctgt ggtcgcggat
     3301 gacggctccg gccacgccgc cccgctcata cagcagttct tcgacgcggg ttcgctccag
     3361 cacggtggcg ccggccgcgc gggcagcggc aactaattgg ttgtcgagga ttcgacgcga
     3421 gattgagagc ccggtgggcc ggaatgggtg gtgtccggcg agggcgaact tgccatgcgc
     3481 ggtggccccg cgggggcccg tcaccttcat tccttcgagc ggaaaggcgc cggctctctc
     3541 gaggatttcc accaccccga ggcgcgccag gatgcgaacc gcttccgggc tcatgtactc
     3601 ggagcacgcc ttgtcgcggg gaaatgcggc gcgatctacc acgaggacgg aaatcccggc
     3661 gcgggccagc agggtagccg tggcactgcc ggcggggccc gcaccggcca caagcacgtc
     3721 gacctggcca ccgctctcag ccgacacgct ggtactcact actcagccag gcgcgagcca
     3781 acgccacacc cccaccgcgg cgcaaccggc cagggccgtg gcggcgaggt tcacaccatc
     3841 gttgttcagc catgccatgc caccttctcg gatcgtcgcg gcgccacagc ggtgcacccg
     3901 ccattcgctg gccacgtcgc aagccggaca gtgaaagcgc ccctgaagca gcgtgccgag
     3961 cgtcgagtcc gcgaccatcc cgaggaaacc tatcagcgtt cccaccggca gcagcatggg
     4021 cagcccggca gccaccgctc cggtgcccga gacgaccagc gctcccaggg cacctccggc
     4081 cgatccgatc agggtcatgc cgccgctggt tcccgggggc acggtccttc cgaagccaag
     4141 gagccgcggc gccgtgccgc tccgggtccc cagcgacgta gcccaggtgt cggcagccgc
     4201 agccgccagc gtcgcggtca ccagccagat ccctagctcg ccgggtgcgg ccactgcacc
     4261 agccgccgcg acgcccccat tggcatacac ctgccagatg tcgcgccggt cgcccttggg
     4321 gtcgagctga accagagcgc gttgcagccc gatccgggat accaggttgc tcgcaatgaa
     4381 gaaggcggcc agcaccgcgc cgccattcca gccacttcca tagagtacca gcgtgccgac
     4441 cgtccatgcc gctattgcgc ccgacgatgt aagagtctga gcccgccacc ctaaccaggc
     4501 gactcctgcg ccgaccgttg ccgccaacgg gagcggcacc gggctcagct gcccctcgcc
     4561 tccgcccgca gcgctgccag aatgcgcgcc cgcagctcgc gggggcaggt ctcgtggcgc
     4621 gcgcacgtct gcagcttctg gaagaagctt tcctcgaact gggcgtgagt aaagcagtgc
     4681 cggcagcgct ccagatgctg ctgcacctct cccaccagct cgggggtcag ttcccgtttc
     4741 aggtagtcgt ggagatgagt gagggcttcc tcgcaatcga tccggctcac gttcggctct
     4801 cccgggcctg gatgtagccc atctcgaccg cgtgggcata taactgcgct tgcagctggc
     4861 gccgggcgcg gaacaagcgc gacttcaccg tgcccacggg gatctgcagg gtgtcggcga
     4921 tctcggcgta cgtcattcct tctatatcgc tcagggcgag gacctcccgg aagtcaggtg
     4981 gcagtgcgtc gatggcctcg agcaccttgt catccacgat ctgggagaag aacgtgcctt
     5041 ccgggtcact ctcctgcatc gagcggtaga gcgcgtgggg ctcgacggcc tcgaggtcca
     5101 tcgcgatcgg ctcgtgcttg cggcggcgat aatcattgat gaaggtgttt cggaggatcg
     5161 tgagcagcca gcccttggcg ttggtcccgg gacggtactg ccgccatgag cggtaggcct
     5221 tgagcatcgt gtcctggacc aggtcttcgg cctggctggg atcggccgtg agccgcaggg
     5281 ccacgcggta caaagcatcg agatgcggca gggcctcatc atcgaacgag cgtcctgctt
     5341 ccgtaggctc cgccataggg ggaatgtagc ccgcgcgggc aacgcaagca ccccctggct
     5401 cacgcgcctc aggcggggta tgttccgcgc cgaatcccgt gcccaagccc tccgtctccg
     5461 cactcattcc cctcagcctg ctcgaggcga tccgcaacct cgacactccc gtcgaggacg
     5521 ggctggacga gctcgccgaa gagatcgcgg tccggagact cggtctgagc cccacggtcg
     5581 cagctcagat tcagcgctat cgccagagcg ccgagcgggg ggtcggcgtg gacctcgacg
     5641 agacggtttc ggtgttccgg ctggtcggcc ggcgagccga cgcggcgctg gtctttgccg
     5701 acgccggccg gcgggccgcc cgctacgccg cgaaggcccg cagtcgctcc tctcgcacac
     5761 tcatcaggct atcaccccga ccgctggcgc ggcggcttgc cctcagaagc gtggcgcggc
     5821 tgacgcggtc gatcttcgac ggcgagctca aggcccgcgc gcatgtcgtc gagctccgca
     5881 tgagcgcacc gctttcgttc gtggcgctgc cggccggcga agcgtgcctg ttctacggct
     5941 ccgcctatct cgagatgctt cgtgccctca ccggcttcga gggcgccctc ctgcacgcgc
     6001 actgccgctc ccgcggcaat gccgattgcc actggcatac ggcggttgcg gaggtctacg
     6061 agtgatcgat ctggcggagt tgagacaggc gcttgccggc gcggaactgg atggctggct
     6121 cctgttcgac ttccacgggc tcaatcccgt ggccgaccgg ctgctcgacc gaacggggat
     6181 gaacacccgc cgcttgttcg tcctgttgcc gcgggagggg gagccggtcg ccatcgcgca
     6241 caagatcgag ctccaggggc tggagaactt ccccggccgg gtgattccct atgcgcgctg
     6301 gagcgagctc cacgccgctc tgggctcggt ggtggcggga cgcaagctgg cgatggaaat
     6361 ctcccccgac gacgcggtgc cctatctcga ccgggtgccg ttcggggtgg tcgagctgct
     6421 ccgccggctg ggtgccaccg tggtgccctc gggcgcgctg gtctcgcggt ttgctgcccg
     6481 gtggagccgg tcggaggcgg aggaccaccg ggtcgcggcg gagatcctcg cttccgtcgc
     6541 tcgggagacg ctggctcggg tggtgagcca gggcggcgag gggatcagcg aatctgcctt
     6601 gcaggcgcag gtggtcgccg cggtagaggc tcgcggcttg gtcttcgatg atccgcctat
     6661 cgtggcattc ggggccaact cggccaaccc gcactacgaa ccgagccccc gggcgacgct
     6721 tcaaagcggc gacgtggtgc tgctcgatct ctgggccggg cggagccaca cgaccgtgtt
     6781 tgccgatcag acctggatcg gattcgccgg aagccggccc ccccagcagg tggccgaggt
     6841 ctggcggacg gtg
//
LOCUS       DASYRV010000312         4928 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2971769, whole genome shotgun sequence.
ACCESSION   DASYRV010000312 DASYRV010000000
VERSION     DASYRV010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4928
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2971769"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2123)
                     /locus_tag="VGQ24_08160"
     CDS             complement(<1..2123)
                     /locus_tag="VGQ24_08160"
                     /inference="COORDINATES: protein motif:HMM:NF024574.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454850.1"
                     /translation="MNLEKLKDTARKLEQKEDWRKAIEVYLKAIQQAESGAETSPDLS
                     LYNRVGDLYLKINDTAEAVRSYERAVDLYADQGFFNNAIALCGKILRVNPGRTQTYLK
                     LCQLHARKNVVSEAKRNLIEFLERMNALGQLDQAFQAVKLFTDQFSGSQEIRSMLVEL
                     LRATSRGDEAREQLEKMAQDLEESGDKSAARKARERLHGLEAEHPPAAAAPPPHARRG
                     DLIFLDTGMDLPTSPSRGATPAPPPRPAKEHLRPVREPPPPEPEPLPETEPVELDEPL
                     VSEPATPEPAPLEDLIIDPMMSGQAIGMGADSLLGLESQVDAGDDSLETLPDLTAPLD
                     IQREQPADLDFAPMTLEGMEDTSIPDLNQDQPSALDFSDDMMMSFPEADTGAEVDAEL
                     EDSVKLTSDHGADALLGGGPSSDQAEAEGVVSDELADLENRVLDDPENPDLHLELADK
                     LVSMKATDRVAEELELALAGYEDRQDWPLAAQMSDRLVQLSPDSITHHQKRVELAYRM
                     GDRAPLLEAYLGLGDALAKSGALDKASAVYGRVIEHDPGNARAAAALRRLTPAPAPPP
                     PPAAAPAPKPAPAPAPAAPPAAAVPKSPSPSKTAPPPKAVPAPAPSPPPQRARAAAVS
                     NDDFIDLGSMVRDEEPRPRDTRMRVNRREPQDQDEQREFHEILEQFKRGIDQNLDSDD
                     YQSHYDLGVAFKEMGLLDEAIAEFQ"
     gene            complement(2243..3799)
                     /gene="hutH"
                     /locus_tag="VGQ24_08165"
     CDS             complement(2243..3799)
                     /gene="hutH"
                     /locus_tag="VGQ24_08165"
                     /EC_number="4.3.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004397 - histidine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ammonia-lyase"
                     /protein_id="HEV8454851.1"
                     /translation="MPQPACVLDGQSLAIEDVVRVARDPAARIVVQPEARRALRDSRG
                     LVDQAIRSGHTIYGINTGFGKLANVRIPADQLDQLQANLIRSHAAGVGTPLPPAIVRA
                     VMLLRANVLLRPTSGVRPELVDALVALLNGGVTPLVPEQGSVGASGDLAPLSHIGLAL
                     MGEGQVLARDGNAVPAAGALTAAKLNPYRFAPKEGLAFINGTQAQTALLALMVHDANV
                     LWRTAVGAAAMSLEALRGTPAPLDPRIHQVRPHPGQIRAAALMRSLLEDSEIRESHRE
                     NDPRVQDAYSLRCAPQVLGAVADAIRFAQDTVMVELNASTDNPLVFENGDVISGGNFH
                     GQPVAQALDVLAMTLTTLQAIAERRVERLVNPDLSQGLPAFLTRDPGLCSGLMMVQIT
                     AASLVAESRALAMPASIGSIPTDANQEDFVPMGMAAGYKAGRILVNAQRVVGAELLCA
                     AQGLEFLKPLAPGRGVAALYGRLRGLSPPVLPLTADRSPAPDLERVARAVAQGELDPE
                     APEIGVLAGR"
     gene            complement(3863..4732)
                     /locus_tag="VGQ24_08170"
     CDS             complement(3863..4732)
                     /locus_tag="VGQ24_08170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454852.1"
                     /translation="MRGFRAPVLFLLVAACSSDHTAPGDAPDVPATLSSTSLDHAIAL
                     TWSDNSYTFDPTNFQNYRVFSTTYDLDNDVCGSWRLEGTTVAPEFIVGALANGVPRCF
                     AVSAVSVTGAESAQSPVRSDTPRPDARNVVVYPVQDRADSSGFRFWDDDGDGQVEDGE
                     LGRIRAGAATDIDFFVDRDGSGSLFFNPVRAGTGVELYDVVPIEDLTSVDVAACIAGA
                     IPGQCAAYTTSPLEASPGFGYVFETDGGDGFLRYGAVRVTHVGQTFLILDWAFQTDRG
                     NPELLVQQRGTSR"
BASE COUNT          813 a         1613 c         1642 g          860 t
ORIGIN      
        1 ttctggaact cggcgatggc ttcgtcgagc agtcccatct ccttaaacgc gactcccaga
       61 tcgtagtgag actggtagtc gtccgagtcg agattctggt cgatcccccg cttgaactgc
      121 tccaagatct cgtgaaactc acgctgttcg tcctgatcct gtggctcgcg acgattgacc
      181 cgcatccggg tatcccgtgg gcggggttcc tcgtcccgca ccatcgatcc cagatcgatg
      241 aagtcgtcat tcgaaaccgc ggccgcccgc gcccgctgcg ggggaggtga aggcgccggc
      301 gcagggaccg ccttgggtgg cggggcagtc ttagacggcg acgggctctt tggtaccgcc
      361 gcagcgggcg gagcagccgg ggcgggagcg ggcgccggtt ttggggctgg agccgccgca
      421 ggtgggggcg ggggagccgg tgccggagtg agccgtcgca gcgccgccgc cgcccgcgcg
      481 ttgcccgggt catgctcgat gacacggccg tagaccgccg acgccttgtc cagtgcgccg
      541 gattttgcta gggcatctcc gagaccaagg tacgcctcga gcagcggagc gcgatcaccc
      601 atccggtatg ccagctccac ccgcttctgg tggtgagtga tgctgtcagg cgacaactgg
      661 accaggcgat cggacatttg agccgccagt ggccagtcct gccgatcttc gtagccggcc
      721 aaggccaact cgagctcctc cgcgactcgg tcggtcgcct tcatggatac cagtttgtcg
      781 gccagctcga gatgcagatc cggattttcc ggatcgtcga gtacccggtt ttccaggtcg
      841 gccaactcgt ccgacaccac cccttccgct tccgcttggt ccgatgaggg cccgcccccg
      901 aggagcgcgt cggccccatg gtcggaggtg agcttgaccg agtcctccag ctccgcgtcc
      961 acctccgcac ctgtgtcggc ctcggggaac gacatcatca tgtcgtccga gaagtccagc
     1021 gcgctcggct ggtcctggtt caggtcgggg atggacgtat cctccatccc ttccagtgtc
     1081 atcggcgcga aatccaagtc ggccggctgc tcacgctgga tgtcgagcgg ggccgtgagg
     1141 tcaggcaacg tctcgaggga atcgtctccg gcatccacct gggattcgag gccgagcagc
     1201 gagtccgcgc ccatgccgat cgcctgtccc gacatcatcg ggtcgatgat caggtcctcc
     1261 agcggggcgg gctcgggggt tgcaggctcg ctgacgagcg gttcgtccaa ctcaaccggc
     1321 tccgtctccg gcagcggctc cggctcgggc ggcgggggtt cccgcacggg ccgaaggtgc
     1381 tccttggccg gtcgcggcgg gggcgctggc gtcgccccgc gcgacgggct ggtggggagg
     1441 tccatgcccg tgtcgagaaa gatcaaatcg ccgcgacggg cgtgcggggg cggagccgcg
     1501 gcggctggag ggtgctcggc ctcgaggcca tgcaaccgtt cccgtgcctt cctggctgcc
     1561 gatttgtcac ccgactcctc taggtcttgc gccatcttct ccagctgttc gcgcgcctcg
     1621 tcgccccgcg atgttgcccg gaggagctcg accagcatgc tgcggatctc ctggctgccg
     1681 gagaactggt cggtaaacag cttgactgcc tggaatgcct ggtcaagctg gccgagggcg
     1741 ttcatccgct ccagaaattc gatcagattg cgcttggctt cgctgacgac gttcttgcgg
     1801 gcgtggagct gacagagctt gaggtaggtt tgcgtcctgc cggggttcac ccgaaggatc
     1861 ttgccacaga gcgcgatggc gttgttgaag aagccctggt cggcgtacag gtcgacggcc
     1921 cgttcgtacg aacgaaccgc ttcggcggtg tcattgatct tgaggtagag atcgcccacc
     1981 cggttataca gggagagatc ggggctggtc tccgctcccg attcagcctg ctggatggcc
     2041 ttcaggtaaa cttcaatggc ctttcgccag tcctcctttt gctccagctt ccgcgccgtg
     2101 tctttcagct tttcaagatt catgcggccg gggctgagaa ggatgactgg ggataagagt
     2161 cggagtgatc gaaagatacc gggccgccga aacccgggca agcagccgtg acagaggcgt
     2221 caaagttttg ggcggcaccg ccttacctgc ccgccaggac accgatttcg ggagcctccg
     2281 ggtcgagctc gccctgcgcc acggccctgg ccacccgctc taggtccggc gcgggtgagc
     2341 gatcggccgt gagcggcagc actgggggac tcaggccccg gagcctcccg tagagcgcgg
     2401 cgaccccccg gccaggagcc aagggcttga gaaactccaa tccctgggca gcacacagca
     2461 gctcggcccc aaccactcgc tgcgcattga ccaggatccg gccggccttg tagcctgccg
     2521 ccatccccat ggggacaaaa tcctcctggt tcgcgtccgt cgggatggac ccgatactcg
     2581 cgggcatggc caaggcccgg gactccgcca ccaacgatgc ggctgtgatc tgcaccatca
     2641 tcaggccgga acagagccct ggatccctgg tcaggaaggc cggcaggccc tgcgataggt
     2701 caggattgac cagccgttcc accctccgct cggcgatcgc ctggagcgtc gtcagcgtca
     2761 tcgccagcac gtcgagcgct tgcgccaccg gctggccgtg aaagtttcca cccgagatca
     2821 catcgccatt ctcgaacacg agcgggttat cggtggaggc gttgagttca accatcacgg
     2881 tgtcctgggc aaagcgaatc gcgtcggcca cggcaccgag gacctgcggc gcacaacgga
     2941 gactgtaggc gtcctgtacc cggggatcgt tttcgcggtg cgactcgcgg atttcgctgt
     3001 cttcgagcag tgaccgcatg agtgcagcgg cacggatctg gccggggtgg ggccggacct
     3061 gatgaattct gggatcgagc ggcgccggag tcccccgtaa tgcctccagg ctcatcgccg
     3121 cggcgcccac ggcggtccgc cacagaacat tcgcgtcgtg taccatgagg gccagcagcg
     3181 cggtctgggc ctgggtgccg ttgatgaacg cgaggccttc cttcggggca aaccgatagg
     3241 gattgagctt cgccgcggtg agcgcccccg ccgcagggac ggcgttgcca tcgcgggcga
     3301 gcacctgccc ctcacccatg agcgccagcc cgatatggct gaggggcgcc aagtccccgc
     3361 tggccccgac gctcccttgc tccggcacga gcggtgtgac cccaccattg agcagggcaa
     3421 cgagtgcgtc caccagctcc ggacggacgc cgctggttgg acgcaggagc acgtttgccc
     3481 ggagcagcat gacggcgcgg acgatcgccg gcgggagcgg agtaccgaca cccgcggcgt
     3541 gactacgaat cagattggcc tggagttgat ccagctggtc ggccgggatg cgcacattgg
     3601 cgagcttgcc gaacccggtg ttgatcccat agatcgtgtg acccgatctg atggcctggt
     3661 ccaccagccc ccggctgtcc cggagcgcgc gccgtgcctc gggttgaacc acaatacggg
     3721 cggctgggtc acgcgccacc cgaaccacat cttcgattgc gagagattgt ccgtcgagca
     3781 cgcacgctgg ctggggcatc gcccgaagtt gctgcagtac cgccgccgat tcaacccctg
     3841 tccgcgagca ggttcacgcg gctcagcgag aggtcccccg ctgctgcacc agcagctcgg
     3901 ggtttccgcg atcggtttgg aatgcccagt cgaggatcag gaaggtctgt cctacatgcg
     3961 tgacccgcac cgccccgtac cgaaggaagc cgtcaccgcc atcggtctcg aacacatagc
     4021 cgaaccctgg cgatgcctcg aggggtgagg tcgtgtacgc tgcgcactgc cctgggatgg
     4081 ctcccgctat gcatgcggcg acgtccacgc tggtaagatc ctcgatgggc acgacgtcgt
     4141 agagctcgac gcccgtgccg gcccggaccg ggttgaagaa gagcgagccg gacccatcgc
     4201 ggtccacaaa gaagtcgatg tcggtggcgg ctccggcccg gatccgccct agctcgccat
     4261 cttcgacctg tccgtcgccg tcatcatccc agaagcgaaa gccgctgctg tccgcccggt
     4321 cctggaccgg atataccacc acgttgcggg catcgggacg gggagtatcg gagcgcaccg
     4381 gcgactgtgc gctctccgct ccggtcacgc tgacggcgct caccgcgaag cagcgcggaa
     4441 ccccgttggc cagcgcgccc acgatgaact ccggcgcgac cgtggtcccc tcgagccgcc
     4501 acgagccgca cacgtcatta tcgagatcgt aggtcgtgct gaagacccgg taattctgga
     4561 agttggtggg atcgaaggta taggagttgt cggaccaggt cagcgcaatc gcgtggtcga
     4621 gtgatgtgct ggagagggtg gccggaacgt caggagcatc acccggggcg gtatggtcgg
     4681 acgagcacgc cgcaaccagc aggaaaagaa ccggtgcccg gaagccccgc atagctgatt
     4741 ctccagagag ggatgcctcg actgcggcag atcgcgtgcc aaaaacatcg gagcagcggg
     4801 gcggcgaacg aacctgctgg tgtgccctgg ccgccccgcc ggccgcgtgc cgtgtccccc
     4861 cgcggggaca ggctagggct caaatgtcgt ctgattgtag tcgaacttga gctccggcag
     4921 agacatca
//
LOCUS       DASYRV010000313         4297 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_4065406, whole genome shotgun sequence.
ACCESSION   DASYRV010000313 DASYRV010000000
VERSION     DASYRV010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4297
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4065406"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..399)
                     /locus_tag="VGQ24_08175"
     CDS             complement(<1..399)
                     /locus_tag="VGQ24_08175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454853.1"
                     /translation="MSVVLRVGALEEGNASLDHESTWLIGHTQHISFHDIWEDEGELY
                     VDATLHVPCRFLQPDGSAARCAAYGFTGPKPRGPVRREQPRRLGRDRFLIVENRRTAI
                     RTLPPPPRSLPVLGAANPCALASCRTADHTR"
     gene            645..1115
                     /locus_tag="VGQ24_08180"
     CDS             645..1115
                     /locus_tag="VGQ24_08180"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HEV8454854.1"
                     /translation="MRMTSMVAGLAVVLAACGGEKKTQEQPAAGESAGAAPAAAAPAA
                     TGKTHDVNMVLDGSKYKYDPDNLTIQSGDVVRYHNKSGGPHNVSFWSDSIPGGAADVL
                     KKNMPDQMAPLEGPLLTEPDAVYQVSFAGAPKGDYKFYCLPHLALGMRGKLTVQ"
     gene            complement(1248..2123)
                     /locus_tag="VGQ24_08185"
     CDS             complement(1248..2123)
                     /locus_tag="VGQ24_08185"
                     /inference="COORDINATES: protein motif:HMM:NF025736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEV8454855.1"
                     /translation="MAIALDVAPRNREGVRSSPLRAVDLLLLGYLGVVSVVAGVRAPS
                     QPGCWWLLLAHALFVVLLFLVTRPGLGPVGRTIRELYPLFLLPGLYSELDILNGPGVA
                     VHDALVRQWELLVFGGQVSRDWWQAAPSALWSTMFHAAYLSYYLILSAPAVYFAWKGD
                     LAAVRRFVLVVMATFIICYLCFIFFPVAGPYYEFAHPPGWFIENLPARLAYEALATGS
                     SYGAAFPSSHVAAALAATLAAMRASRRLGLVLLLPTALLTMGVVYCQMHYGVDALAGL
                     AVGGLMTWVVRRRRA"
     gene            complement(2114..3070)
                     /locus_tag="VGQ24_08190"
     CDS             complement(2114..3070)
                     /locus_tag="VGQ24_08190"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEV8454856.1"
                     /translation="MTGATGFVGSHLVEALQHSSVEVTAFARSATKAAELAQRGVRVV
                     SGDLHDTAGLERAVRDQDVVYHVAGVVAARDEAEFLRSNRDGTRNLLTAAERRGRPRL
                     VLVSSLAAAGPARRGAPLSGTEPPHPVTAYGRSKLAAEQIVRSSSLPWSIVRPPIVYG
                     PRDREVLKVFRLARLGLVPVFGDGSQELSAVHVEDLAQALMAVTKAPTTIGGTYHACH
                     PQVFSSGELGQAVGAAMGRSVVCLRVPHAVGRALLAITETSARLTRQVTILTTDKANE
                     FFQPAWTGDPSPLTRDAGWRARYDLSSGLADTYQWYRKAGWL"
     gene            complement(3079..>4297)
                     /locus_tag="VGQ24_08195"
     CDS             complement(3079..>4297)
                     /locus_tag="VGQ24_08195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454857.1"
                     /translation="PDGDPHLRANRLRSRAVRDDRQGPGGHLIERLRVRAARDRRDLK
                     RFIDLPYRLHARDPVWVPPLRRDMETLLSRTKNPFFDHAEAEYFIAERDGVVVGRIAA
                     ISNRLHNETHGDRVGFFGFFECIDDQAVADALFTAAADWCRALGHDVLRGPASFSVND
                     ECGLLIDGFDRPPTVMMPHNPRYYLSLLERAGFAKAKDLWVYQGGSEERYVPVPERLA
                     RATELIRQRQGITLRALNMKDFEGEIERIKELYNSAWEKNWGFVPMTEREIDHLAEQF
                     KPVVIPELVPMAEKDGKLIGFGIALPDLNVVFRKNRSGRLFPMILKLLWALKAKRIRR
                     ARILLLGVLPDHQAKGIDAMLYHWIWTKSGERGIYWGEAGWILEDNPAMNAGLEKMTF
                     RVYKTYRLYDRRI"
BASE COUNT          821 a         1367 c         1390 g          719 t
ORIGIN      
        1 gcgggtatgg tccgcggttc ggcacgaggc cagagcgcac gggttggccg cgccgagcac
       61 tggaaggctc cggggagggg gcgggagtgt ccggattgcg gtccgccggt tttcgacaat
      121 cagaaatcgg tcccggccca gccggcgagg ttgttcccgt cgaacgggcc cccttggctt
      181 cggtccggtg aagccgtagg ccgcacagcg ggcggcgctt ccgtccggct gcaagaaacg
      241 gcaggggacg tgcagcgtgg catcaacgta cagctcaccc tcgtcttccc agatgtcatg
      301 gaagctgatg tgctgagtat gaccgatgag ccaggtggac tcgtgatcca gggaggcgtt
      361 cccctcttcg agagcgccga cccgaaggac gaccgacacc ccccggcact gcggccccag
      421 agcgtgacag ggtggaacca cgggaacctt gggccagtgt ttcgttttga ctgtggattc
      481 catgagcacc cagggagaag tgaccggttc tgacccaaag ctaacgatcc caccagggct
      541 aggcaccgcc tgcagaacca ctaccgtttg ctgactcggc gcttatagtt gtgaaagggt
      601 tcacaaagtc ggaaacttca tgctcggagg cggagcggcg aaaaatgcgg atgacttcga
      661 tggtggcggg gctggccgtg gtcttggcgg cctgtggcgg cgagaagaag actcaggagc
      721 agccggcggc cggggagtca gcgggtgcgg caccggcggc agcggcacct gccgcaaccg
      781 ggaagaccca tgacgtgaac atggtcctcg atggatccaa gtacaagtac gaccccgata
      841 acctaaccat tcagtcgggt gacgtggttc gctatcacaa caagagcggc ggcccgcaca
      901 acgtgtcctt ctggtctgat agcattcctg ggggcgctgc ggacgtgctc aagaagaaca
      961 tgccggatca gatggcgccg ctcgaaggtc cgctcctgac cgagccggac gctgtgtacc
     1021 aagtgagctt tgccggcgcc ccgaagggcg actacaagtt ctactgtctt ccgcacctcg
     1081 cgctgggcat gagggggaag ctgacggttc agtagagcgg tgagagctaa gaagtaggcg
     1141 gtgagagggg tgtccggatt ggtcgcgggc accccgcttt gtttcacccc gcactcacct
     1201 ctagccttgc acctcacctc tcacctctca cctctctctc ttcctactca cgctcttcgc
     1261 cttcgcacca cccacgtcat cagcccgccc accgccagtc cggccagcgc gtccacgcca
     1321 tagtgcatct ggcagtacac cacccccatt gtcagcagag cggtgggtag caggagtacc
     1381 aggccgagac ggcgggaggc ccgcatcgct gccagcgtcg cggccagcgc cgcggcaacg
     1441 tgagaggacg gaaacgctgc gccatatgag ctgccggtgg cgagcgcctc atacgccaga
     1501 cgggccggca gattctcgat gaaccagccg ggtgggtggg caaactcgta atagggcccc
     1561 gccaccggaa agaagatgaa gcagagatag cagatgatga acgttgccat gacgacgagc
     1621 acgaaacggc gcacggcagc caggtcgccc ttccaggcga agtacacggc gggcgccgag
     1681 agaatcaggt aatacgacag gtaggcggcg tgaaacatcg tggaccagag tgcgctcggc
     1741 gcggcctgcc accagtcgcg gctgacttgc cctccaaaga cgagcagctc ccactggcgt
     1801 accagcgcgt cgtggaccgc cacacccggg ccgttgagaa tgtcgagctc gctgtacagt
     1861 ccaggtaaca gaaagagggg gtagagctct cggatcgtgc ggccgaccgg ccccaggccg
     1921 gggcgggtca cgagaaaaag aagcaccacg aatagggcgt gggccaggag cagccaccag
     1981 caccccggct ggctcggagc ccgcactccg gcgacgacgg aaaccactcc caggtacccg
     2041 aggagcagca gatccacggc ccggagtgga ctgctccgga ctccctcgcg gttccggggc
     2101 gctacatcca gggctatagc catccggcct tccgatacca ctgatacgtg tcggcgagac
     2161 cgctgctcag atcgtaccgg gcgcgccaac cggcatcgcg cgtcagcgga gaggggtctc
     2221 cggtccaggc cggctggaag aactcgttcg ccttgtcagt cgtgagtatc gtgacctgcc
     2281 gggtgagccg ggccgaggtt tcggtgatag cgagcagcgc ccgtcccact gcgtggggca
     2341 ctctgagaca cacaaccgag cggcccatcg cggcaccgac cgcttgccct agctcaccgc
     2401 tgctgaacac ctgagggtga catgcgtggt acgtcccgcc gatagttgtc ggggccttgg
     2461 tgaccgccat caatgcctga gccaggtcct cgacgtgaac cgccgaaagc tcctggcttc
     2521 catcgccaaa gaccgggacc aacccgagtc gggccaggcg aaataccttg aggacttcgc
     2581 ggtcacgggg accgtacacg atgggcggcc gcacgatgga ccagggcagg gaggagctcc
     2641 gcacgatttg ctcggcggcc agcttgctgc ggccgtacgc cgtcaccggg tgcggaggct
     2701 cggtgcccga cagcggcgcg ccacggcgag ccgggcccgc ggccgccagc gacgacacca
     2761 gcacgaggcg gggtctgccc cggcgctccg cggcggtgag aaggttacgt gtcccgtctc
     2821 ggttggagcg gagaaactca gcctcgtcac gcgcggctac cacgcctgct acgtggtaga
     2881 cgacatcctg atcccgtacg gcgcgctcaa gtccagcagt gtcgtggagg tctccgctga
     2941 ccacccgtac cccgcgttga gcaagctccg cagcctttgt ggctgatcgg gcgaacgccg
     3001 ttacctcgac ggagctatgc tggagcgcct caaccagatg actgccgacg aagccggtgg
     3061 cgccggtcac cagggccctc atatcctgcg gtcgtagagc cggtaggtct tatagactcg
     3121 gaaggtcatc ttttcgaggc cggcattcat cgccggattg tcctccagga tccatcccgc
     3181 ttcgccccag tagatgccgc gctccccgga tttggtccag atccaatggt agagcatggc
     3241 atcgatccct ttggcctgat ggtccggcaa taccccgagc aagaggattc gtgcccggcg
     3301 gatccgcttg gccttgagcg cccatagcag cttgaggatc atcgggaaga gtcggcccga
     3361 tcgattcttt cgaaacacca cgttcaggtc gggaagcgcg attccaaacc cgatcagctt
     3421 gccgtctttc tcggccatgg gcaccagctc cgggatgacc actggcttga actgctcggc
     3481 caggtgatcg atctcgcgct cggtcatcgg gacgaagccc caattcttct cccacgccga
     3541 gttgtagagc tccttgatcc gttcgatctc gccctcgaag tctttcatgt tgagcgcccg
     3601 gagggtgatg ccctgacgct gccgaatgag ctcggttgcc ctcgccagcc gctcaggcac
     3661 cgggacgtac cgttcttcgc ttccgccttg atacacccag agatccttcg ccttggcaaa
     3721 cccggcccgc tcgagcaaag agagataata gcgggggttg tgcggcatca tcacagtcgg
     3781 tggcctgtcg aagccgtcga tgagcagtcc gcactcatcg ttcaccgaga aggaggcagg
     3841 gcctcgcagc acgtcgtgtc ccagagctcg gcaccagtcc gctgccgcgg taaagagcgc
     3901 atcggccacc gcctggtcat cgatacactc gaagaagccg aagaaaccga cccggtcacc
     3961 atgggtctcg ttgtgaagcc ggttgctgat ggctgcgata cggccaacca caacaccatc
     4021 acgttcggcg atgaagtact cagcttcggc gtggtcgaag aaggggttct tagtgcgaga
     4081 gaggagcgtc tccatgtccc gacgcaacgg cgggacccag acagggtccc gcgcgtggag
     4141 tcggtagggc aggtcgatga atcgtttcag gtcccgccgg tcgcgcgccg ctcggacgcg
     4201 caggcgttcg atcagatgac ccccaggtcc ctgccgatcg tcgcgaactg ctcgagagcg
     4261 aagtcgattt gctcgaaggt gtgggtcgcc atcaggc
//
LOCUS       DASYRV010000314         8061 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3650943, whole genome shotgun sequence.
ACCESSION   DASYRV010000314 DASYRV010000000
VERSION     DASYRV010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8061
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3650943"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(62..1369)
                     /locus_tag="VGQ24_08200"
     CDS             complement(62..1369)
                     /locus_tag="VGQ24_08200"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 87 protein"
                     /protein_id="HEV8454858.1"
                     /translation="MTGWPGRRLWAYAAGLGVLVAVAAAVATKRASTQRIGTDFHVFW
                     QAGYDFAHGLPLYQNLPGSRHFIYPPFAAQIFQVLGLFPLEVAAWLFYVASVGLVLVA
                     VGISRDIVRRLDPTRASVHLPLVLAVVFSANFILNNLNMLQVNLLIFVLCLLGIRAFA
                     EQRELAGSGWLVAATAIKLTPVFFVLWALIRGTRRSLAGVAGFGMLCVILPMIQRGFH
                     QGLTDLTTYYQSFLHEFTSGRVVAHYTNQNLAAMVYRAVVPRTGGQGETYNYVYLPSL
                     ETAAPLIYGVLALVVVAALLAHLVRLRVRHRPLSALEISSVFLASHLLSGITWKAHLV
                     TLLFVFYAFFVLDPREIGRRGQVALGLAWAGIAAIGIGRDLMGDRLHHYVGGYSVIVW
                     AMLLLFALSIVWSQRITLPLLSRPSDRRAPCSTSGPGSPWPSD"
     gene            complement(1366..2874)
                     /gene="dacB"
                     /locus_tag="VGQ24_08205"
     CDS             complement(1366..2874)
                     /gene="dacB"
                     /locus_tag="VGQ24_08205"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HEV8454859.1"
                     /translation="MLARSGRFLSRAVGVFSVFSVFSVFTVLSAQSLGRRIDSRMDAP
                     PFNRQFWGVALVDEGGRLLYGRNQDRLFIPASNTKLVVSAVASALLPPDWKVKTSLYG
                     GPVVNGVLQGDLVLYGRGDPTIGRRCYATDSTLAGVCDTDPFARLRQLVDTLRAKGVR
                     AITGAIVGDGSYFETTLVHPNWEGFDLNWWYAAPVSGLGFHDNSVDFDWGPGPAPGTP
                     AIITMNPNLGDIAFENRTVTVAPGGESDIGDRFFRHPGTLQIWAEGTVALDNPSHTES
                     FALPDPSLYAARALRQVLAEAGISVLGGTRSTTDSTAYATLRRTAPLAEAPSRPLRDW
                     IFPIMNTSQNWIAEMLLKQLGRQFGKAGSWPEGLEVERRFLIDSVKVDSTQFSLSDGS
                     GLSSSNLISPLAFTQLLRYMRRHPRYATFAAGLPQAGLVGSLRNRFLGTPLAGRVRAK
                     TGSISRVITLAGYLELDRGRTLTFSVLVNHHAQPSRPMLAVIDSVVVEMSKR"
     gene            complement(2912..3832)
                     /locus_tag="VGQ24_08210"
     CDS             complement(2912..3832)
                     /locus_tag="VGQ24_08210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8454860.1"
                     /translation="MSRFLLYRVLLLIPTLLGVLLVTFLLLYVAPGDPVQAMVGERAD
                     PETLARLRAELRLDDPLHKQFGHYVSGVLRGDLGTSYITRRPILRDLLQRFPATLRLA
                     GAAMLFAATVGISIGIYGAWRPGSWADRVAALGAYLGVSFPVYWVGLILILVFAVHLR
                     WLPPSGSGGLVYLILPAFTLGMRSVAFLSRMTRAAMQEVLRSDFIRTARAKGLGESRV
                     VLSHGFRNALLPVLTVLGLDFGSYLTGSILTETIFSWPGVGRYVLTAIDKRDLPAIQG
                     SILFLSVVFVIVNLLTDLLYARVDPRVAYD"
     gene            complement(3829..5364)
                     /locus_tag="VGQ24_08215"
     CDS             complement(3829..5364)
                     /locus_tag="VGQ24_08215"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEV8454861.1"
                     /translation="MHRLLLGLTAFVLTGCADETDRASLNYFFSYDPRSLDPALSTDV
                     PTGELVALLFDNLTQFDADARLVPGLARSWETDAAGRSYTFHLRQDARFHDGRPVKAA
                     DVRASMLRALAPGTTGGRSWPLYPIRGARTYAAGKAKDVEGLRVPDDSTVVLTLEEPL
                     NVFPKLLAMPVAAIVPTPTPADFDQQPNGSGPWKFVSWSHDDAVVLARNERYWGGAPK
                     SETLRIRIIPEPLTQAAEYEAGQLSVVEVPVGETRRWQETHGHELQRRPALRDLYVAI
                     NTTRGPLKDVRVRRALNHAIDVPTLLTTLFADRGVRSAGSLPPGIAGYDSTRTPYQHD
                     PAKAKKLLADAGYPNGFALKLWRTQRAELARLAQSIQQGLAEIGVRAEIVERDASSAR
                     AAVRNGEADLFLTDWYADYPDPENFNYPLFHSRNKGPGGNYAFLADPDLDSMISRARA
                     TTDEMEKTRLARDIDARVFDLAPWIFLWFPVDVWAAQPDLQGWRIPLIFTGQRWMQAE
                     RTR"
     gene            5663..7813
                     /locus_tag="VGQ24_08220"
     CDS             5663..7813
                     /locus_tag="VGQ24_08220"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEV8454862.1"
                     /translation="MPGRPVRPAMRPTIRFAVLLAALAVSAPLAAQQAQLVVRQLKFE
                     GNKAIPDDVLAAAIVTTNSSWFARAFLFRSLGFLGAKRYFDEQEFRRDVVRLGVLYKR
                     SGYPDAAIDTLVRRTPQDVYITFRIHEGDPIAVTSLSVNGLDSLPPRLRRAVLLDLPL
                     QQGDPFNRFAMQASADSITRRLRDRGHPSARVFSAFESNKEAKTATVTLEAEPDGRAV
                     IGRIRVIGAQRIDTSLVRKLLVSRPGRRYSQEELFQSQRNLYESDLFRFATVNIDSAA
                     YHPGEDSVPLLVQVNEGKFRRIRGGLGYATNDCFRGSLGWTSRNFLGGGRILDLTTQA
                     SKVGVGDPVDWGLAQNICRTSRDDSVGSARINYYLGASVKRPAFLSPNNAITLSLFNE
                     RRSEFKVYLRQETGVSVALIRITPRRRNPLSLTYTLSYGRTEATPESFCSFFSACTPD
                     VIEPLRENRVLATLSALGTFSRVNSPVDPTRGSLSSVELTFSSKYIGSSSLQQFIRFT
                     AGSAWYRPLSRDVVFSWRLRGGVIFSPTIDVATGTGAFIPPEQRFYAGGPNDVRGFER
                     NELGPVVYIIPKSAVDSAAAKGQGIPADSVRVAATGGNTFVLGNIELRVPSPVFSSRL
                     RLAAFVDAGGVWQRQSPNSSKVVRVTPGVGIRLATPLGPARLDVAYNPYKLQPGPLLQ
                     FDSSGTLTPVPGQASYVLARNRKYTIHFAVGQPF"
     gene            7813..>8061
                     /locus_tag="VGQ24_08225"
     CDS             7813..>8061
                     /locus_tag="VGQ24_08225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454863.1"
                     /translation="MRRQLARLLFVFVVGSVAMVLGVVTSMTLTPPGRDLLARTVSKL
                     LDRIVTGQVKVGAISGSFLYDLTLENLVVRDTSGALLVD"
BASE COUNT         1515 a         2589 c         2610 g         1347 t
ORIGIN      
        1 aagctgattg ccaccggggc ctcggaggcg tgtatcgcgg tgaacaatgc agtgcactgg
       61 atcaatccga aggccaaggt gaacccgggc cactcgtcga acatggcgct cttcggtcag
      121 aaggacgact gagaagaggt aacgttatcc gctgactcca gacgatgctc agcgcgaaca
      181 gcaggagcat cgcccagacg ataacgctgt atcctccgac gtaatgatga agccggtcac
      241 ccatgagatc ccgcccgatc ccgatagccg cgatccctgc ccacgcgagc ccgagcgcca
      301 cctgcccgcg ccggccgatt tcccgcggat caagcacaaa gaaggcatag aacacgaaca
      361 gcagggtgac gaggtgggcc ttccaggtta tgccggagag taggtggctt gccaggaaga
      421 cgctcgagat ctcgagcgcg gagagcgggc ggtggcggac ccggagtctc accaagtgag
      481 ccagcaaggc ggccacgacg accagggcca gcacgccgta gatgagcggt gccgcggtct
      541 ccaaagaggg cagatacacg tagttgtagg tctctccctg tccccccgtc cggggtacga
      601 cggcccggta gaccatggcc gcaaggttct gattggtgta gtgcgcgacc actctccccg
      661 acgtgaactc gtgtagaaag ctctggtagt atgtggtgag gtccgtcagt ccctggtgga
      721 atcctcgttg gatcatcggc aagatcacgc ataacatccc gaatccggcc acccccgcga
      781 ggcttcgacg ggtccctcgg atgagtgccc agaggacaaa gaatacgggc gtaagcttga
      841 tcgccgtcgc ggcgaccagc catccgctgc ctgccaactc ccgctgctcg gcaaaggctc
      901 ggatcccgag caggcagagt acgaagatca gcaggttcac ctggagcata ttcagattgt
      961 tcaggatgaa attggctgaa aagaccaccg ccagaacgag cgggagatgg acgctagccc
     1021 gggtcggatc gagtcgccgg acgatgtctc gggaaatgcc gactgcaacg aggaccaggc
     1081 caacggaggc gacgtagaag agccacgcgg caacttccag gggaaagagc cccagcacct
     1141 gaaagatttg cgcggcgaac ggcggataga tgaagtggcg gctgcccgga aggttctgat
     1201 agagaggcaa cccgtgcgcg aaatcgtatc cggcctgcca gaacacgtga aagtcggtgc
     1261 cgattcgttg ggtgctggct cttttcgtgg caactgccgc tgcgaccgct accagcacac
     1321 cgagccctgc ggcgtaagcc cagagccgcc gcccaggcca tcccgtcacc gcttcgacat
     1381 ctcaacgact acgctgtcaa tcaccgccaa catcggccgg ctcggctggg catgatgatt
     1441 gaccaggacc gagaacgtga gtgtcctccc gcggtccagc tcgaggtaac cggccagagt
     1501 gatgacccgg gaaatgctgc cggtcttggc tcgaacccgt ccagccagcg gggtccccag
     1561 aaagcgattg cgcagcgatc caaccaaccc ggcttggggc aggccagcgg cgaatgtggc
     1621 atatcgcggg tgccgtcgca tgtaacgaag aagctgggta aacgccagcg ggctgatcag
     1681 attgctgctc gagaggccgg agccgtcact cagtgaaaac tgagtggaat ccaccttcac
     1741 cgagtcgatg aggaacctgc gctccacctc caacccctcg ggccaagacc cggccttacc
     1801 aaattgccgg cccagctgct tcagcagcat ctctgcaatc cagttctggc tggtattcat
     1861 gatggggaag atccagtcgc gcagcggccg cgagggagcc tccgccagtg gagcagtccg
     1921 gcgtagggtg gcgtaggcgg tcgagtcggt ggtggagcgg gtgccgccaa ggacggatat
     1981 cccggcttcg gccaggacct ggcgcagcgc tctggcggca tacaggctgg gatccggtaa
     2041 ggcgaacgac tcggtgtgtg acgggttgtc gagcgcgacc gtgccctccg cccagatctg
     2101 cagcgttccg gggtggcgga agaagcgatc gccgatatcg gactcaccgc cgggcgcaac
     2161 cgtcaccgta cggttctcga acgcgatatc gcccaggttc gggttcatgg tgatgatcgc
     2221 cggcgtgccc ggagccggcc ccggacccca gtcgaagtcc acgctattgt cgtgaaagcc
     2281 gagccccgag accggggcgg cgtaccacca gttcaggtca aatccctccc aattgggatg
     2341 taccagcgta gtctcgaagt aactcccatc ccccacgatg gcccccgtga tggcccgcac
     2401 ccctttcgct cgcagggtat cgaccagttg acgcagtcgg gcgaacggat cggtatcgca
     2461 gaccccggcc aaggtgctgt cggtggcata gcagcgccgg ccgatggtcg gatcgccccg
     2521 gccatacagc accaaatcac cctggagcac cccgttgaca acgggcccgc catagaggct
     2581 ggtcttgacc ttccagtcgg gaggtaggag cgcagaggcc accgcactca ccaccagctt
     2641 ggtgttgctc gccgggatga agagacggtc ctgattacgg ccgtaaagca ggcgcccgcc
     2701 ttcgtccacc agggccacgc cccagaactg ccggttgaac ggcggggcgt ccatgcggga
     2761 gtcgatgcgg cgtccgagag actgcgcgga gaggacggtg aagacggaga agacggagaa
     2821 gacggagaag acgccgactg cccgggacag gaaacggcct gatctggcta gcacctctcc
     2881 gccctttccg tcctttccgc cttctccgtc ctcaatcata cgccaccctc ggatccactc
     2941 gggcatacag caaatcggtg agcaggttca cgatcacgaa gaccacgctg agaaagagga
     3001 tgctcccctg tatcgcggga aggtcacgct tgtcgatggc ggtgaggacg tagcggccga
     3061 cgccgggcca cgagaagatg gtttcggtga ggatggagcc ggtcaggtag ctaccgaagt
     3121 cgaggcccag caccgtaagc accgggagca acgcgttccg gaacccgtgt gagagaacca
     3181 ctcggctctc tcccagtccc ttggcacgcg ccgtgcgaat gaaatcactc cgcagcacct
     3241 cctgcattgc cgcgcgcgtc atccgcgaga gaaaggcaac cgatcgcatc ccgagcgtaa
     3301 acgccgggag gatgaggtag accagccctc cggagccgga cggagggagc cagcgcaagt
     3361 gtacggcgaa caccaggatc aggatcagtc ccacccagta gaccgggaac gacacgccaa
     3421 ggtacgcacc cagcgcggcc acgcgatccg cccagctgcc tgggcgccag gcaccgtaga
     3481 tcccgatgct gatccccacg gtggccgcga agagcatcgc cgcacctgcc agtcggagcg
     3541 tggcggggaa acgctgaagc aggtcgcgca ggatcggccg gcgcgtgatg tagctggtgc
     3601 cgaggtcgcc tcgaaggacg ccgctcacgt agtgcccgaa ctgtttgtgg agagggtcgt
     3661 ccaggcgcag ctcggctcga agccgggcca gagtttccgg gtcggcccgc tcaccgacca
     3721 tggcctgaac cggatcgccc ggtgccacgt acaggagcag aaaggtgacc agcaagacgc
     3781 cgagcagcgt ggggatgaga aggaggacac ggtaaagaag gaagcggctc acctggtccg
     3841 ctctgcttgc atccagcgct ggccggtaaa aatcagcggg atgcgccagc cctggagatc
     3901 gggctgcgcg gcccagacgt ccaccggaaa ccagaggaag atccagggcg ccagatcgaa
     3961 gacgcgagcg tcgatatcgc gggccagccg ggtcttctcc atctcgtcgg ttgtcgcccg
     4021 tgcgcggctg atcatcgagt ctagatcggg atcggcgagg aaggcgtagt tgccaccagg
     4081 tcccttgttg cgcgaatgaa agagcggata gttgaagttc tccgggtccg gataatcggc
     4141 ataccagtcg gtcaggaaca gatcggcttc tccgtttcgc accgctgccc gtgcgctgga
     4201 ggcgtcccgc tccacgatct cggcccggac cccgatctcg gcgagcccct gctggatcga
     4261 ctgcgccagg cgcgcgagct cggcccgctg cgttcgccac agcttcagcg caaacccatt
     4321 gggatatccg gcatcggcca gcagcttctt cgccttggcc gggtcgtgct ggtacggagt
     4381 gcgggtcgaa tcgtagccgg cgatgccggg tggcagtgac ccggccgatc gcactccccg
     4441 gtcggcaaaa agagtggtga ggagagtcgg cacgtcgatg gcgtggttca gcgcgcgccg
     4501 cacccgcacg tctttcaggg gaccacgcgt ggtattgatc gcgacgtaga gatcacggag
     4561 tgccgggcgt cgctgaagct cgtgcccgtg agtctcttgc cagcggcggg tttcaccgac
     4621 cggcacctcg accacgctca gctgaccggc ttcgtattcc gcggcctggg tgagcggctc
     4681 ggggatgatc cggatccgca gcgtctcgga cttcggagcg ccaccccagt agcgctcgtt
     4741 ccgggccagg acgacggcgt catcgtggga ccaggagacg aacttccagg gcccgctgcc
     4801 gttgggctgc tggtcgaagt cagcgggggt tggcgtcggc acgatcgcgg ctaccggcat
     4861 ggcgagcagc ttggggaaaa cgttgagcgg ctcttcgagc gtcagcacca cggtcgaatc
     4921 atctggcacc ctgaggccct ccacgtcctt agctttgccg gcggcataag tgcgggcacc
     4981 acggatcggg tacagcggcc agcttcggcc accggtggtg cccggtgcca acgctcgaag
     5041 catcgacgcc cgcacgtcgg cagccttcac cggccgcccg tcgtggaagc gggcatcctg
     5101 ccggaggtga aaggtgtagc tccggcccgc ggcgtccgtc tcccaggacc gagccagccc
     5161 cggaaccagc cgggcatcgg catcgaactg cgtgaggtta tcgaagagga gagccacgag
     5221 ctcgccggtc ggcacgtcgg tggacaaggc agggtccagc gagcggggat cgtagctgaa
     5281 gaaataattc aggctcgccc gatcagtctc gtcggcgcag ccggttagta cgaaagcagt
     5341 gaggccgaga agtaatcggt gcatcgctcg atgggcagga tggcaggggc aacaggccag
     5401 gctgggcggt cggcagcagg ggcccggcag cagcccgcgt gcgtcgcaga ggaaaaaagg
     5461 ctccgctgtc caactgactc gctgcccgcc ggctgcaccg ctggcgttga ctctagggtg
     5521 taagacggtc aaactaccgg gcttacggca cgcctgtcaa tctgctccca gtgcaccagc
     5581 cggccggaac cctagtcgtg gagtgcggca ttcccagtca cctgcgccgg cgcgaccggc
     5641 cgtctccgat ccgcggagcc ccgtgccagg tcgtcccgtc cggccggcaa tgaggcctac
     5701 catccggttc gccgttctgc tcgcggcgct cgccgtgagc gcccctctgg cggcacagca
     5761 ggcccagctg gtcgtccgcc agctcaagtt cgaggggaac aaggcgatcc ctgacgacgt
     5821 cctcgccgcc gcgatcgtca ccaccaactc cagctggttc gctcgggcgt tcctttttcg
     5881 ttcgctgggg tttctcggcg ccaagcgcta cttcgatgag caggaatttc gacgcgatgt
     5941 cgtgcggctc ggggtgttgt acaagcgcag cgggtatcct gacgcggcga ttgacaccct
     6001 ggtccggcgc accccgcagg atgtctacat cacgttccgg atccacgagg gagaccccat
     6061 tgcggtgact tcgctctcgg tcaacggcct ggattcgcta ccgcctcgcc tgaggagagc
     6121 cgtcctgctg gacctcccgc tacagcaggg tgatccgttc aatcgattcg ccatgcaggc
     6181 gagcgcggat tcgatcactc ggcgcctgcg ggatcgcggc catccctcgg cccgggtctt
     6241 ctccgcattc gagagcaaca aggaagccaa gactgcaacg gtgacactcg aagccgaacc
     6301 tgacggccgg gccgtgatcg gccggatccg ggtcatcggg gcccagcgca tcgacacttc
     6361 cctggtcaga aagcttctgg tgtcgcgacc ggggcggcgg tactcccagg aagagctgtt
     6421 tcaaagccag cgaaacctct acgagtcgga tctcttccgc tttgccaccg tcaacattga
     6481 ctccgcggcc tatcaccccg gggaggactc ggtaccgctg ctggtgcagg tcaatgaggg
     6541 taagttccgg agaatccgtg gggggctggg ctatgccacc aacgactgct tccgcggctc
     6601 gttgggttgg acttcgcgga acttcctggg cggtggccgg atcctcgacc tcaccaccca
     6661 ggcatcgaag gtgggggtgg gggacccggt agactgggga ctggcccaga acatctgccg
     6721 cacctcgcgg gacgactcgg tcggctcggc gcggatcaac tattacctcg gcgcgtccgt
     6781 caagaggccc gcgttcctct cgcccaataa cgcgataacc ctctcgctct tcaacgagcg
     6841 ccggtcggag ttcaaggtct atctgcgcca ggagaccggc gtgagcgtgg ccctgatccg
     6901 cattacgccg cggcggcgca atcctctgtc gctgacctac accctgtcgt acggccgaac
     6961 cgaggccact ccggaaagct tctgctcgtt cttcagcgcc tgcacccctg acgtgattga
     7021 gccgctccgg gagaaccggg tgctcgccac gctctcggcg ctgggaacat tttcccgggt
     7081 gaacagcccg gtagatccca cccgcggatc gctctcgtct gtggagctca ccttcagctc
     7141 caaatacatc ggctcctcgt cgcttcagca gttcatccgc tttaccgcgg gctcggcctg
     7201 gtaccggccg ctgtctcgcg atgtagtctt cagctggcga ctgagaggag gcgtcatctt
     7261 ctcaccgacg atcgacgtcg ccaccggaac gggcgccttc atacccccgg aacagcggtt
     7321 ttatgccgga ggcccgaacg acgtgcgcgg gttcgagcgc aacgagctgg gtcccgtggt
     7381 ctacatcatc ccgaagagcg cggtcgactc agccgcggcc aagggccagg ggattcccgc
     7441 ggactcggtg cgggtggcgg ccacgggtgg aaacaccttc gtcctgggaa acatcgagct
     7501 gcgggtgcca tcgccggtct tcagctcgcg tctccgcctc gccgcatttg tcgatgccgg
     7561 cggagtgtgg caacggcaga gccccaactc gtcgaaggtc gtgagggtca caccgggcgt
     7621 cggaattcgt ctggccacgc ccctggggcc ggcacgtctc gatgtggcgt acaacccgta
     7681 taagctccaa ccgggcccgc tgcttcagtt cgacagctcg ggcaccctca ccccggtgcc
     7741 tggccaggct tcatatgtgc tggctcgaaa ccgaaaatac accatccact ttgctgtcgg
     7801 gcagccgttc tgatgcgccg acagctcgcc cggcttctct ttgtcttcgt ggttggcagc
     7861 gtggccatgg tgctgggcgt ggtcacctcc atgacactca cgccacccgg gcgggatctc
     7921 ctggcccgga ccgtgtccaa actcctcgat cgtatcgtca cgggtcaggt gaaagtcggt
     7981 gccatttcgg gctccttcct gtacgacctc accctggaaa atctggttgt tcgcgacacc
     8041 agtggagcgt tgctcgtaga c
//
LOCUS       DASYRV010000315         3705 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1576130, whole genome shotgun sequence.
ACCESSION   DASYRV010000315 DASYRV010000000
VERSION     DASYRV010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3705
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1576130"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1768
                     /locus_tag="VGQ24_08230"
     CDS             <1..1768
                     /locus_tag="VGQ24_08230"
                     /inference="COORDINATES: protein motif:HMM:NF014679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HEV8454864.1"
                     /translation="RDEINRINVFPVPDGDTGTNFSLTLRAVADALRALGDASLPETA
                     RTMARAAVLGARGNSGLMLAHFLLGFTDALGDRTVAAAPDIARAVRSGADRLYEALDD
                     PREGTILTVARDAAVAAEPTAGASDDIGAFMRRLLEEGEAALARTPELLAVLKDAGVV
                     DAGGKGFVRMLEGVVRYIDGDPTLGVDPSSDVDSDAMAPAAMIDVAVERDFQFCTEVL
                     VRGDRLPSANEVRAAMHTFGGSTVVAVTGDILKIHVHTDTPEAVFSYAARWGRVDTTK
                     AQDMRAQHRRLAHSDRRAVAVVTDSSADLPDAMLDRHRIALVPLQVVFGNSTFRDRVE
                     LKPEEFYRRLRQSTELPTTSQPAPADFIQAFRDAREEADQVVAVLLGSTLSGTFNAAQ
                     VAIRAAGLERIHLVDSRSASFGVGLLALRGAELAESGWTGERIAAELARLRSRSGMLL
                     TVDRYDNLLRSGRISRGKAWLAGMLDVKPILSLDREGHVVPIERVRGRENVEARVLSQ
                     LEQRLTPRPKVIRFGVAHADAPDVAQRIQATLVEKYQPRDCFVALATGVLATHVGPGA
                     WGIFYQIEDGPGPLDEEEAPKG"
     gene            1795..2148
                     /gene="rsfS"
                     /locus_tag="VGQ24_08235"
     CDS             1795..2148
                     /gene="rsfS"
                     /locus_tag="VGQ24_08235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEV8454865.1"
                     /translation="MKRPPPEALRLALDAIQDLKGSQLVVLDLRGLNDATDYFVIASG
                     TSDAHVRGIAESIMEKLDRRGHHTHHVEGLNGGRWVLLDFVDFVIHLFHPETRSFYQL
                     ERLWDDAPELLISSS"
     gene            2161..>3705
                     /locus_tag="VGQ24_08240"
     CDS             2161..>3705
                     /locus_tag="VGQ24_08240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454866.1"
                     /translation="MLRRAVPALLVLLFAPGLLSAQYFGRNKVQYSRFDFKLIQTEHF
                     DVYYYERERVASMDAARMAERSYARLSKVLNHEFRERKPIILYASHSDFQQTNALGAE
                     PPGEGTGGVTDFQRNRAVMPFTGSYAELEHVLQHEMVHQFQYDTWSRGRAGGGLSTII
                     AINPPLWFAEGMAEYLSLGPINPETAMWLRDASLEGSLPTIEQMTLDPYKYFPYRYGH
                     ALWSYIGERWGDEAVGAILKATLGGGVEGAFRRTIGLTLDQLSDQWRDAVQKKYLPEI
                     GARAKARAVADELLTEKRSEGTLHLAPALSPDGSQVAYFSEKDFYFVDLYLADGKTGK
                     VKRRILKSGVSSNYETYRFINSQANWSPDGKYLAFAAKRGARDDIVIVDPVRNKEVKR
                     IQVKLSGVTTPAWSPDGQQLVFTGYDGGLSDLFIVSRDGSGLRRLTEDKYADLHPVWS
                     PDGRTIAFATDRGEKTDFKTLAIGNMRIALYDLDTGSIQVLDHMERGKNVSPQWAPDG
                     QSIAFVS"
BASE COUNT          643 a         1224 c         1213 g          625 t
ORIGIN      
        1 acgagacgag atcaaccgga tcaatgtctt cccggtgccg gacggagaca ccggcaccaa
       61 cttcagcctg accctgcgtg ccgtcgccga cgccctccga gcgctcggcg acgcttcact
      121 tccagagacg gcccggacca tggcccgcgc ggccgtgctg ggggcgcggg gtaactccgg
      181 attgatgctc gcgcatttcc tgctcggatt caccgacgcc ctgggtgacc gcaccgttgc
      241 cgccgccccg gacatcgcac gcgccgtgcg cagcggcgcg gaccggctgt acgaagcgct
      301 ggacgaccca cgcgaaggca ccatcctcac ggtagcgcga gacgcggccg tggccgccga
      361 gccgactgcc ggtgcgtccg acgacatcgg ggcgttcatg cggcggctgc tcgaagaagg
      421 ggaagcggcc ctggctcgga cgcccgagct gttggccgta ctcaaggacg cgggtgtcgt
      481 cgacgcgggt ggcaagggct tcgttcgcat gctcgagggc gtggtccgct acatcgatgg
      541 cgaccccacg ctgggggtcg atccctcgag cgacgtggac tcggacgcga tggcccccgc
      601 cgcgatgatc gacgtcgccg tcgagcgcga cttccagttc tgcaccgagg tgctggtacg
      661 cggtgaccgg cttccctccg ccaacgaggt tcgggcggcg atgcacacct ttggcggctc
      721 caccgtcgtg gccgtcacgg gtgacatcct caagatccat gtgcacaccg acacccctga
      781 ggccgtcttt agctatgcgg cacgttgggg tcgagtggac accaccaagg cccaggatat
      841 gcgggcccag catcggcgcc tggcccactc ggatcggcgg gcggtggcgg tggtgaccga
      901 cagctcggcc gacctccccg atgcgatgct cgatcgccat cgcattgccc tggtgccgtt
      961 gcaggtcgtg ttcgggaatt ccaccttccg ggaccgggtg gagttgaaac ccgaggagtt
     1021 ctaccgccgg ctccgccagt ccaccgagct gccgaccaca tcgcagccgg cgccggcgga
     1081 tttcattcaa gcgtttcgag acgcgcggga ggaagcggac caggtcgtcg cggtgctgct
     1141 cgggtcgacc ctgtcgggca ccttcaatgc cgcccaggtc gccattcgcg ccgcaggcct
     1201 cgagaggatt cacctggtgg acagccggtc ggcgtccttc ggggtcggcc tcctggccct
     1261 gcgcggcgcc gagctggccg aatcgggctg gaccggcgaa cgaatcgccg cggagctggc
     1321 cagactgcga agccggtccg gcatgcttct gacggtggat cgctacgaca atcttctccg
     1381 ctccggccgg atctctcggg gcaaggcatg gctggccgga atgcttgacg tcaaaccgat
     1441 cctctcactc gaccgcgagg gccacgtcgt gccgatcgag cgagtgcggg gacgggagaa
     1501 cgtggaggcc cgcgtgctga gccaattgga gcagcggctc acgccgcgcc cgaaggtgat
     1561 acgcttcggg gtggcccacg ccgatgcgcc ggacgtggcc cagcggatcc aggccacttt
     1621 ggtggagaag taccagccgc gcgactgctt tgtcgccctg gcaaccggcg tgctcgctac
     1681 ccatgtgggt ccgggcgcct ggggaatctt ttatcagatc gaggacgggc ccggcccact
     1741 cgacgaggaa gaggctccga agggatgatc cacgacgcaa gaccgagccg gccggtgaag
     1801 cgcccaccgc cggaggcgct tcgcctggcg ctcgatgcca tacaggactt gaagggcagc
     1861 cagctcgtcg tgctcgacct tcgcggcctg aacgatgcga ccgactactt cgtcatcgca
     1921 tccggtacct cagatgcgca cgtgcggggc atcgcggagt ccataatgga aaagctggat
     1981 cgccgcgggc accacaccca tcatgtcgaa ggcctgaacg gcggccgctg ggttttgctg
     2041 gatttcgtgg attttgtcat ccacctcttt catcccgaaa cgcgctcgtt ctatcaactc
     2101 gagcggctct gggacgatgc acccgagctg ctgatcagct cttcctagat cgaggtcgct
     2161 atgctccgac gcgccgtccc ggccctcctt gtcctgctgt tcgcgccagg actgctgtct
     2221 gcccagtact tcgggcggaa taaggttcag tacagcaggt ttgatttcaa gctgatccag
     2281 accgagcact tcgacgtgta ctactacgag cgagagcggg tggcctccat ggatgccgcg
     2341 cgcatggccg aacggagcta tgcccggttg tccaaggtgc tgaaccacga gttccgcgag
     2401 cggaagccca ttatcctgta cgcctcgcac tccgatttcc aacagaccaa cgccctgggc
     2461 gcggagccgc cgggcgaggg caccggaggc gtcaccgact ttcagcgcaa ccgcgcggtg
     2521 atgccgttca ccggctcgta cgcggagctc gagcatgtcc tccagcacga gatggtgcac
     2581 cagttccagt atgacacctg gtcccgcggg cgcgccggcg gcggactgtc cacgatcatt
     2641 gccatcaatc ctccgctctg gttcgccgaa ggcatggcgg agtacctctc gctcgggccg
     2701 atcaaccccg agaccgccat gtggctgcgc gacgcctcgc tcgagggcag cctgccgacc
     2761 atcgagcaga tgacgctcga cccatacaag tacttcccct atcgctacgg ccacgcactc
     2821 tggtcgtaca tcggcgagcg ctggggggac gaagcggtcg gcgcgatcct caaggcgacg
     2881 ctcggcggtg gagtcgaagg agcattccgg cgcacgatcg ggctcaccct ggatcagctc
     2941 tccgatcagt ggcgggacgc ggtgcagaag aagtacctgc cggagatcgg cgcacgggcc
     3001 aaggcccggg ccgtggccga cgaactgctg acggagaagc ggtcggaggg caccctccac
     3061 ctggcccccg ccctctcgcc tgacggctcc caggtggcct acttcagcga gaaggacttc
     3121 tatttcgtcg acctctacct ggcggacggc aaaaccggca aggtgaagcg ccggatcctc
     3181 aagtccggcg tcagcagcaa ctacgagacc taccggttca tcaactcgca ggccaactgg
     3241 tcgcccgacg gcaaatacct cgcttttgcg gccaagcgcg gcgcgcggga tgatatcgtc
     3301 attgtcgacc cggtgcggaa caaagaagtc aaacgcatcc aggtgaagct gagcggtgtc
     3361 actacgccgg cgtggagccc ggacggccag cagcttgtgt tcaccggata cgatgggggg
     3421 ttgagcgatc tcttcattgt gtcacgggat gggagcggcc tccgcaggct caccgaggac
     3481 aagtacgcgg acctccatcc ggtgtggtca ccggatgggc ggaccatcgc gttcgcaact
     3541 gatcgaggcg agaagaccga tttcaagact ctggccatcg gcaacatgcg gatcgcgttg
     3601 tacgatctcg acaccggctc cattcaggtg ctcgatcata tggagcgggg aaagaacgtg
     3661 agtccgcaat gggcaccgga tggacaatcg atcgccttcg tctcc
//
LOCUS       DASYRV010000316         1781 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1103267, whole genome shotgun sequence.
ACCESSION   DASYRV010000316 DASYRV010000000
VERSION     DASYRV010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1781
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1103267"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..366)
                     /locus_tag="VGQ24_08245"
     CDS             complement(<1..366)
                     /locus_tag="VGQ24_08245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454867.1"
                     /translation="MRPRALFTSVAFAVAVLVLAPGAAAWAGAGPGGFSSEQAAGTPY
                     KHQSNWEPTVATDPGHPDLVYQLITGINAHQCAPRCPGTSVLFRKSTDGGSTWGAEQF
                     VCGLACKGVGWQFDPQIKVA"
     gene            complement(730..1086)
                     /locus_tag="VGQ24_08250"
     CDS             complement(730..1086)
                     /locus_tag="VGQ24_08250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454868.1"
                     /translation="MTDIEPGADITIGHVYDVGHHRDQDHLVVHIPLADHVDQDWVRW
                     YQRLARVKGISARAEDHPHRAQVIVEVPGFIERDNIHALLDAARALITETDAAVERPP
                     PMAEAEHAVREWWSEQ"
     gene            1390..>1781
                     /locus_tag="VGQ24_08255"
     CDS             1390..>1781
                     /locus_tag="VGQ24_08255"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEV8454869.1"
                     /translation="MDVQFVASVAPIVRDVATARAFYGDALGLSFEGGEGDYIFTHRL
                     DGTKHFRLWPLAEAATACFGTREWPSEVPVPQASIEFEVSDVAAAAAELEGKGYRLIH
                     GARTEPWAQVTARLLSPEGLLVAVCHTLS"
BASE COUNT          277 a          600 c          596 g          308 t
ORIGIN      
        1 ggccaccttg atctgcgggt cgaactgcca ccccaccccc ttgcacgcca gcccgcagac
       61 gaactgctcg gcgccccagg tgctcccccc atcggtggac ttgcggaaca gcacgctcgt
      121 ccccgggcag cgcggggcgc actggtgagc gttgatcccg gtgatgagct ggtagaccag
      181 gtccgggtgg ccggggtcgg tggcgaccgt gggctcccaa ttgctctgat gcttatacgg
      241 cgtgcccgcc gcctgttcgg aactgaatcc gcccggcccg gcacccgccc acgcggccgc
      301 accgggcgcg aggaccagca cggcaacggc gaatgcaacg gaggtgaaca gcgcgcgagg
      361 ccgcatcgga cgtccctccc tccgggagat tccaggcgcc ctatgtacca cgttcctgaa
      421 ttgcgggtca atggcacgcg caccggttcg tcggcgcgac agatcgcccg ctcgggtgcg
      481 gctcgactgg ccagatcaac ggccaggctg ccgcccagaa cgaccaggtc ggtccaccca
      541 ccaaatgggc tgcatggcgt ctccccttga atgggatcgg caagctcgcc cctgtcgatc
      601 gggcaggctg tcgttcgtgt agtgggtgga ggagccggcc tgcggccggc gcagcccggc
      661 gaagcggggc aaatcgaacg catcgatgga aggcagtgag gggcgcctcg cacgcaacca
      721 cagttagcgc tactgttcgg accaccattc gcgcaccgcg tgctctgcct cggccatcgg
      781 cggcggtctc tcgacagcgg cgtccgtttc cgtgatcaag gcccgcgcgg cgtccagcag
      841 cgcatggatg ttgtcgcgct cgatgaaccc gggcacctcg acgatgacct gagcccggtg
      901 tgggtgatct tcggcccgcg cggagatgcc cttgactcgt gccagtctct gataccagcg
      961 cacccagtcc tggtccacgt ggtcggccag cgggatgtgg actaccaggt gatcttgatc
     1021 cctgtggtgg ccgacgtcat agacgtggcc gatcgtgatg tccgcgccag gttcgatgtc
     1081 tgtcattgcg atccggttca cttctgcttg cggccgatgg ccgggctgac cgctagccgg
     1141 gacaagatcg ccacgggcgg cgcgctggct tcccatcaag atagctggtg cgtaccagcc
     1201 gtttacaagt tcacggagcc ggccaggtgg ccggccatgc tcgctgatta cgcggggtaa
     1261 gacggtgtgc cggtgtccgc gagcctccgg gctcttggcg gcactggtgg ctgcaagatc
     1321 cgccgctgac ccgccgggtg tatcaatcct gagaagaccg gctggccccc tgacggaggt
     1381 gaagatcctg tggatgtcca gttcgtcgcc agtgttgcgc cgatcgtccg agacgtcgcg
     1441 acggcccgtg ccttctatgg ggatgcgctg ggcctgtcgt tcgagggcgg ggaaggtgac
     1501 tacatcttca ctcaccgcct ggacgggacc aagcacttca ggctctggcc gctcgctgag
     1561 gctgccaccg cctgcttcgg caccagggag tggccaagcg aggtcccggt tcctcaggcc
     1621 agcatcgagt tcgaagtctc agatgtcgcc gccgccgcgg ctgaactcga aggcaagggc
     1681 taccggctca tccacggcgc ccgcaccgaa ccctgggcac aggtcaccgc ccgcttgctg
     1741 agcccggaag gacttctggt ggccgtgtgc cacaccctgt c
//
LOCUS       DASYRV010000317         4882 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_960398, whole genome shotgun sequence.
ACCESSION   DASYRV010000317 DASYRV010000000
VERSION     DASYRV010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4882
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_960398"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1376)
                     /locus_tag="VGQ24_08260"
     CDS             complement(<1..1376)
                     /locus_tag="VGQ24_08260"
                     /inference="COORDINATES: protein motif:HMM:NF018905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454870.1"
                     /translation="MRGARQVPAILLVLATAACQDNAKPGPPDGLAQLTVTYICGNDF
                     DLQSQNSSALTVEYRVVGTSEAGELNLPPRAAGAPSTTRLTTLTSGDLRISYEGEESA
                     PVVNHATTCPFPTSIPEPQATAGEWSPSFSWPSVAVHLHLLPNGRVLSWGKIGAPTLW
                     DPTTGDFAAAPSTTMLFCSGHSFLADGRLLVTGGHLSDQHGLPDANIFDPASVTWSSV
                     QPMHWARWYPTSTTLPDGEVVTLAGRDQDGVEVETPEVWTGSSWRSLTGAARALPYYP
                     RMFVAPNGLVFYAGELPQSAYLDVRGAGTWLPVATSKYGRRDYGTAVMYRPGKVLIAG
                     GSDPPDGAPTNTAEVIDLNQSSPSWHYTDPMRYARRHLNATLLPDGTVLVTGGTTSAG
                     FSDPAGAVHAAELWDPASGRWSLLASNSVNRVYHSTTVLLPDGRLLHAGSGDGPGLPR
                     ELNAELFAP"
     gene            complement(1400..4117)
                     /locus_tag="VGQ24_08265"
     CDS             complement(1400..4117)
                     /locus_tag="VGQ24_08265"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEV8454871.1"
                     /translation="MADATSLPLEELRRARSREAPAAPSPSERLFQILGDVAPGFLWI
                     VDTNGRFIYTNRTWEEYTGSNLDQLNALGWEQFNHPDDLDAVRRKWSDAIEQGGRFEM
                     ELRYRRHDGEYRWMLARVAPLRDGEGQIQNWVGTSVDIEDLKRTQSELHRSQRELGDF
                     FENASIALHWVGPDGTILRVNQAELDLLGYTRDEYVGRNIMEFHDDRNVIEDILRRVT
                     SGEVLHEYPARLRCKDGSIKDVLIDSSVFFDDGQFKHTRSFTRDVTTERQAQEATARL
                     AAIVASSTDAIISKTLDGVVSSWNAAAERIFGYTETEMVGQPIYRLIPEEYHDAERDL
                     LAQIGQGEPVEVSEAERITKDGRRIHISVSVSPIHDSQGRVIGASSIKRDITERKQAA
                     ETLRQSQERLQLALKAARMGTWRWDVTTNALSWDEGLENLYDLAPDETITRYEQFIER
                     VHQDDRAFVESSVERALDGGGLDYEFRIVLPNGRVRWLADQGRVVRDQSGELLYMTGV
                     CLDVTDRKHAEERLRQAQRMESVGQLAGGIAHEANNMMSVVLGCADYVLQRSDLSEPV
                     RQDVAQIWKAAKRTAGVTQQLLAFSRRQMLQPQVLDLNATVRSLEPILTRTLGESSGL
                     RMHLSASLGRVRADPGQLEQVLINLTLNARDAMQDGGRLTIETMNVVLDPRYVAAKPV
                     ETLKPGEYAALIVTDTGHGMDRETLSRIFEPFFTTKGVGQGTGLGLSTVYGIVKQSGG
                     FIWAYSEPGLGTTFKLYFPLVSTIDEVTDAPETTPPASADEVVLIAEDEPMVRGIMAR
                     TLRDNGYGVLEAADGREALEILEARGGDVSLIIADVVMPGLGGREMAARLAQRWPRVS
                     VLFTSGYTGLDVVRRGLMEEGREFIQKPLAPDELIRKVRQMVDERVPGP"
     gene            4318..4388
                     /locus_tag="VGQ24_08270"
     tRNA            4318..4388
                     /locus_tag="VGQ24_08270"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4350..4352,aa:Gln,seq:ttg)
BASE COUNT          812 a         1571 c         1557 g          942 t
ORIGIN      
        1 ggagcgaaca gctcggcgtt cagctctctg ggtagacctg ggccatcgcc actgccggcg
       61 tgcaagagac ggccgtctgg aagcagcacg gtcgtagaat ggtagactcg gttcacgctg
      121 ttgctggcga gaaggctcca ccttccggag gcgggatccc atagctccgc ggcatgcacc
      181 gcaccggccg ggtcgctgaa tccggccgag gtcgtccctc ccgtcacgag caccgttcca
      241 tcaggcagca gcgtcgcatt caagtgacgc cgtgcatacc tcatcggatc ggtgtagtgc
      301 caggacggcg acgattggtt gaggtcaatg acttccgccg tattggtggg tgctccatca
      361 ggcggatcac tgccgccggc tatcaagacc ttcccggggc gatacatgac ggctgtaccg
      421 tagtctcgcc tgccgtactt gctggtggcc accggaagcc aggtaccggc cccgcgaaca
      481 tcgaggtagg cgctctgagg cagctcgccg gcgtagaaga ccaggccatt cggcgccacg
      541 aacatgcggg ggtagtaagg gagagcacgg gctgcgccgg tgagggagcg ccaggagctg
      601 ccggtccaca cctcgggtgt ctctacctcc acaccatcct ggtccctgcc ggcaagcgtg
      661 acaacctcac cgtccggcaa cgtggtgctc gtcggatacc accgtgccca gtgcatgggt
      721 tggaccgatg accatgtgac gctcgccggg tcgaagatgt tggcatcggg cagcccatgc
      781 tggtcgctca agtggccgcc ggtgaccagc agccgcccat ccgctaggaa gctgtgcccg
      841 ctacagaaca gcatggtggt gcttggcgcg gcggcaaagt caccggtcgt cggatcccag
      901 agtgttggtg caccgatctt accccaggac agcactcgcc cgttcggcag tagatggaga
      961 tggaccgcga cggacggcca actgaacgat gggctccact cgccggcggt tgcttggggc
     1021 tcgggtatgg aagtcgggaa cgggcaggta gttgcgtggt tgacgaccgg cgcgctctcc
     1081 tcaccttcgt aggagatcct caggtctcca gacgtcagag tggtgagtcg agtggtactg
     1141 ggagcgccgg cggctctcgg cgggagattc agctcgcctg cttcggaggt cccgacgacc
     1201 cggtactcga cggtgagggc gctggagttc tggctttgga gatcgaagtc gttgccgcaa
     1261 atgtaggtca ctgtcagctg cgcgaggcca tccggtggtc ccggtttggc attgtcctga
     1321 caggcagctg tggcgagcac caggaggatg gctggtacct ggcgggcacc tctcactcgg
     1381 cgttttccat tcagaagact cagggtcccg gtaccctctc gtccaccatc tggcgcacct
     1441 tgcggatgag ctcgtccggc gcgagcggct tctgaatgaa ctcgcgtccc tcttccatca
     1501 agccccggcg gacgacgtcg aggccggtgt accctgatgt gaacaacacc gacacgcgcg
     1561 gccagcgttg cgcgagccgg gccgccatct cccgcccccc taggcccggc atcaccacgt
     1621 cggcgatgat gaggctcaca tctccccctc tggcctccag tatctccagc gcctctctcc
     1681 cgtcagcggc ttcgagcacg ccgtagccgt tgtcgcgcag cgtacgtgcc atgatgcccc
     1741 gcaccatcgg ctcgtcctcc gcgatcagca ccacctcgtc cgcggaggcg gggggagttg
     1801 tctcaggcgc gtcggtcacc tcatcgatgg tggataccag cgggaagtag agcttgaacg
     1861 tggtacccag gccaggctcg ctgtaggccc agatgaagcc gccactctgc ttgacaatgc
     1921 catataccgt cgagaggccg aggccggtcc cctggcccac gcctttggtc gtaaagaacg
     1981 gctcgaaaat ccgcgacagt gtctcccgat ccatcccgtg gcccgtgtcg gtgacgatga
     2041 gggccgcgta ttcgccgggc ttcaacgttt cgaccggctt ggcggctaca tagcgggggt
     2101 cgagcaccac gttcatcgtt tcgatggtga gtctgccgcc atcctgcatc gcatcacggg
     2161 cgttcagcgt caggttgatc agcacctgct ccagctgccc cggatccgct ctgacccgtc
     2221 cgagactcgc cgacagatgc atccgcagcc cgctgctctc gcccagcgtc cgggtgagaa
     2281 ttggctcgag gctgcgaacg gtggcattca gatcgagcac ctgaggctgg agcatctggc
     2341 ggcgactgaa ggcgaggagc tgctgggtga ccccggcggt tcgtttcgct gctttccaga
     2401 tctgtgccac gtcctgacga accggctctg agagatcgga ccgctggagc acatagtcgg
     2461 cgcagcccaa taccaccgac atcatgttgt tcgcctcgtg ggcgataccg ccggccagct
     2521 gcccgaccga ctccatccgc tgggcctggc ggagacgctc ctccgcgtgc ttccggtcag
     2581 tcacatcgag acagaccccg gtcatgtaga gcagctctcc gctttggtct cggaccacgc
     2641 gtccctgatc ggcgagccac cgcacccggc cgttgggaag cacgatccgg aactcgtagt
     2701 ccagccctcc gccatccaac gcccgctcca ccgagctctc cacgaatgca cggtcgtcct
     2761 ggtgcacccg ctcgataaac tgctcgtagc gcgtgatcgt ttcatccggt gccagatcgt
     2821 agaggttctc gaggccctcg tcccagctca gcgcattggt cgtgacatcc cagcgccagg
     2881 tacccatcct cgcggccttg agggcgagct ggagacgctc ttggctttgt cgcagtgtct
     2941 ccgccgcctg cttgcgctcg gtgatgtcac gcttgatcga ggaggcacca attacccggc
     3001 cctggctgtc gtggatggga gacacactga cggagatgtg gattcgccgg ccatccttgg
     3061 tgatgcgctc ggcctcggaa acctccaccg gttctccctg gccgatctgc gctagcagat
     3121 cgcgctcggc atcgtggtac tcctccggga tcagtcggta gatcggctgg ccgaccatct
     3181 ccgtttcggt gtacccgaag attctctcag ccgccgcatt ccagctgctg accactccgt
     3241 cgagtgtctt gctgatgatc gcgtcggtag acgaggccac aatggcggca agccgggcgg
     3301 ttgcttcctg ggcctggcgc tcggtagtta catcccgggt gaagctccgc gtatgcttga
     3361 actgcccatc gtcgaaaaac acgctggagt cgatcagcac gtccttgatc gagccgtcct
     3421 tgcagcggag ccgggcgggg tactcgtgca ggacctcgcc cgaggtcacc cgccgcagaa
     3481 tatcctcgat gacattacgg tcatcgtgga actccatgat attccgcccc acgtattcgt
     3541 cacgggtgta gccgaggagg tcgagctcgg cttgattaac gcggaggata gtgccgtctg
     3601 gaccgaccca gtgcagcgca atcgaggcgt tctcgaagaa gtctccgagt tcccgctggc
     3661 tgcgatggag ctctgactgg gtacgcttga ggtcctcgat atccacggag gtgccgaccc
     3721 aattctggat ctgcccctcc ccgtctcgca gcggggccac tcgtgccagc atccagcggt
     3781 attcgccatc gtggcggcgg tagcggagct ccatctcgaa ccgcccgccc tgctcgatcg
     3841 cgtcgctcca cttccgcctg accgcatcga ggtcatccgg atgattgaac tgctcccagc
     3901 ccagcgcgtt gagctggtcc aggttcgacc cggtgtattc ctcccacgtg cggttggtat
     3961 agatgaaccg gccgttagtg tccacgatcc acaggaaccc tggggcgacg tcgccgagga
     4021 tctggaagag ccgctcgctt ggggagggcg cggccggtgc ctctcgggac cgggcacgcc
     4081 ggagctcctc aagcggaagg gaggtggcat cagccactgc aacggcctct catgggagtt
     4141 tgcatgtgtc cttgtcgtca gagccgtgga acctatgcgc ggacagcgtc gctgaccgca
     4201 ggattgtgct gccggtgccg cttgaatgtg cgcccgcccg gtggcccggg gcaaggcact
     4261 ttggagccga gccgctccct ttcgcggccc ctttcggaca gctaggcttc agtccactgg
     4321 cccttcgtcc aacggcagga cagcggactt tggatccgtc aatggtggtt cgaatccacc
     4381 agggccaatt ggacttagcg ttctgcggcc aagcttgctg accaccggtc tcggcagctg
     4441 gtgagagtca aactgcagct acagccgctt gcacaccgtg agcccccgca cctgcctgac
     4501 cccgcgcagt ccctccgcga agaagcgcgg cctgggtggg agaggagtgt gctcgtcgtc
     4561 acagcaaaac tggcagggat gggtattgtc ttcgcggggt ggtgaacgta ggcggagtag
     4621 gccccttcgt ggggggtgac cttttctccc atggggctgc gttcccaccg gcaggagcac
     4681 tacgccggcg cttatgaggc gccggcatag tgctttttgg cgctggcggc gagtccatgc
     4741 tgcctaggtt ggggtcgcgg agagagcttc aacggagctt gatgatccgc gccaccgatg
     4801 gaatcctgtt cccgtccaga atgaacagca tgtaatggcc gggtggagcg cggttcttgc
     4861 tggtcggggc cgagatcgtc aa
//
LOCUS       DASYRV010000318         3074 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1576694, whole genome shotgun sequence.
ACCESSION   DASYRV010000318 DASYRV010000000
VERSION     DASYRV010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3074
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1576694"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(59..835)
                     /gene="fabG"
                     /locus_tag="VGQ24_08275"
     CDS             complement(59..835)
                     /gene="fabG"
                     /locus_tag="VGQ24_08275"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HEV8454872.1"
                     /translation="MSVDLTVSSSRMSVSIDLSGKTAFVTGSTRGIGLAIAQALYGAG
                     ARVGVVGRDVERARSVAASLGDRAAGVACDVAQADQVEAAVAAAEAVLGPIDILVNNA
                     GLTRDNILLRLTDADWDTVIDANLKGAFHTIRATIKGMMKRRSGRIINIGSIVGLTGN
                     KGQANYAASKAGLIGLTKSVAKEYASRNILVNCIAPGFIETDMTDALPAEARATLLEE
                     IALGRLGRPEDVAGTVLFLASDLAGYITGQVLVVDGGMVI"
     gene            complement(832..1743)
                     /gene="fabD"
                     /locus_tag="VGQ24_08280"
     CDS             complement(832..1743)
                     /gene="fabD"
                     /locus_tag="VGQ24_08280"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: protein motif:HMM:TIGR00128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEV8454873.1"
                     /translation="MCPGQGAQRVGMGKDLADRFPAARSTFAALDEALGSSLSRLMWQ
                     GPEDELTLTHNTQPAILAHSAAVLAVVGERLGAAAAAAGHSLGEYSAHVAAGTLTAVD
                     AARLVRRRGELMLAAGQERPGAMAAVLGLATEAVQAACDEASGPDGIAVPANLNAPDQ
                     TVISGDPAGVTRAGEGCKARGAKRVIPLKVSGAFHSPLMAAAVDGLREALTEASFADP
                     AFPVIANASGEAVRTGVDAKRLLADQLTAPVRWVACMQAAAALAPGATFIEIGPGNVL
                     AGLLKRIVPTAKTVTLGTADEVERFLQ"
     gene            complement(1752..2747)
                     /locus_tag="VGQ24_08285"
     CDS             complement(1752..2747)
                     /locus_tag="VGQ24_08285"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HEV8454874.1"
                     /translation="MSRRPIAEMASIGVAVPPGVLTNADLTRMLDTSDEWIVERTGIR
                     ERHIATPDQTVAMLSREASEKALSRAGLTAADLDAIVLATATPDRLLPSTACDLQALL
                     GADKAAAFDISAACPGFVFATGIAEGLIASGQSEVILVVGAEKLSTITDFQDRSTAIL
                     FGDGAGAAVVRRATGDNGRGILSTFLKSDGKLAPLLYRPGGGAVDPISEKVVCERSHY
                     MKMAGREVFKAAVLAMAEACDEALRRAGVSADEVDLLIPHQANVRIIEATAKHAGMPM
                     DKVMVNVDRYGNTSSASIPLALDQAITEGRVKSGSVILLVAFGAGFTWGSSVIRW"
     gene            complement(2744..>3074)
                     /locus_tag="VGQ24_08290"
     CDS             complement(2744..>3074)
                     /locus_tag="VGQ24_08290"
                     /inference="COORDINATES: protein motif:HMM:NF014554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454875.1"
                     /translation="DVVVCDGFVGNVVLKFYESVGRLIIGLIKQRVPDLLARPELKDL
                     FRVLDYSTYGGAPLLGVKGVAIICHGASPSNAIKNAIRVAVQSVEADLSKHIGAEFAQ
                     RETAAPT"
BASE COUNT          503 a         1049 c         1010 g          512 t
ORIGIN      
        1 cttgaccttc tcttccacgt tgctcatgta gtcctcgatt ggaggttcgg gtccgcctct
       61 agattaccat tccaccgtcg accaccagca cctggccggt gatgtatccc gccaagtcgg
      121 aagccaaaaa caacacggtc cccgcgacat cctcgggacg gcccaaacgc ccgagcgcga
      181 tctcctctaa taatgtggct cgcgcttcag cgggcaaggc gtccgtcatg tcggtttcaa
      241 tgaaacccgg agcgatacag ttcaccagga tgttgcggct ggcgtactcc ttcgcgaccg
      301 atttcgtgag cccgatgagg ccggccttgc tcgccgcgta attggcctgg cccttgttgc
      361 cggtcaggcc cacgatgctg ccgatgttga tgatccggcc cgagcgccgc ttcatcatgc
      421 ccttgatcgt ggcccggatg gtgtgaaagg cgcccttgag gttggcgtcg atcaccgtgt
      481 cccagtccgc gtcggtcaac cggagcagga tattgtcccg ggtgagcccg gcgttattga
      541 ccaggatgtc aatgggaccc aggaccgcct cagctgccgc aaccgcggcc tccacctggt
      601 cggcctgggc cacgtcgcag gccacgccgg ccgcgcggtc accgaggctt gccgcgaccg
      661 agcgggctcg ctcgacatcc cggccgacca cccccaccct ggcgcccgcg ccatacaacg
      721 cttgggcgat ggcgagacca atgccccggg tgctgccggt gacgaacgcg gtcttgccgg
      781 agaggtcgat ggaaaccgac atccgggatg aggagacggt caggtcgacg ctcattggag
      841 gaacctctcc acctcgtccg cagttcccag cgtgacggtc ttcgccgtgg gcacgatccg
      901 cttcagcaag ccagccagca cgttgccggg accgatctcg ataaaggtgg cccccggcgc
      961 gagcgcagcg gcggcttgca tgcaagcgac ccaccggacc ggcgccgtga gctggtcggc
     1021 gaggaggcgc ttggcatcga cgccggtacg taccgcttct ccacttgcat ttgcaatcac
     1081 ggggaacgcc gggtcggcga agctcgcctc ggtcagcgcc tcccgcaggc catctaccgc
     1141 ggcggccatc agcggagagt ggaacgcccc gctcaccttc agcggaatca cccgtttggc
     1201 tccgcgagcc ttgcagccct cgcccgcgcg ggtgacgccc gccggatcgc cggagatgac
     1261 cgtctgatcc ggcgcgttca ggttggccgg aaccgcgatt ccgtcaggtc cggaggcctc
     1321 gtcacaggcg gcctgaaccg cctcggtggc caggcccaac acggcggcca tggctccggg
     1381 acgctcttgg ccggccgcga gcatgagctc gccccgccgg cgtaccagcc gggcggcatc
     1441 cacagcggtc agcgtgcccg ccgccacgtg ggcactgtat tcgcccaggc tatgtcccgc
     1501 tgcggcagcc gcggcgccaa gccgctctcc aacgacagcc agtaccgcag ccgaatgggc
     1561 cagaatcgcg ggttgggtgt tgtgcgtgag ggtgagctca tcctccggac cctgccacat
     1621 caggcgcgac aacgagctgc cgagcgcctc atcgagggca gcgaaggtag accgggcggc
     1681 cggaaaccgg tcagccaggt ccttccccat ccccacccgt tgtgccccct ggccggggca
     1741 catcagtacg gtcaccacct gatgacggag ctgccccagg tgaatcccgc accgaaggcg
     1801 acgagcagga tgaccgagcc cgacttcacc cgtccttcgg tgatggcctg gtcgagcgcg
     1861 agggggatgg aggccgacga cgtgttgccg tagcgatcca cgttcaccat gaccttgtcc
     1921 atgggcatac ccgcgtgctt tgcggtggcc tcgatgatcc ggacgttggc ctggtggggg
     1981 atgagcagat ccacctcgtc tgcactcacc ccagcccggc gaagcgcctc gtcgcaggct
     2041 tcggccatgg cgagaaccgc ggccttgaat acctcgcggc cggccatctt catgtagtga
     2101 gaacgctcgc agaccacttt ttcactgatc ggatcgaccg caccgccgcc gggccggtag
     2161 aggagcggcg cgagcttgcc gtcggatttg aggaaggtcg agagaatgcc acgaccgttg
     2221 tcgccggtgg cccggcgcac caccgctgcg cctgccccgt cgccgaacag gatggcggtg
     2281 gaacggtcct gaaagtcggt aatggtcgag agcttctcgg ctcccacgac caggatcact
     2341 tcgctctgac ccgaggcgat cagtccctcc gcgatgccgg tcgcgaacac gaatcccggg
     2401 cacgccgcgg agatgtcgaa cgccgccgcc ttatcggcgc cgagcagcgc ctggagatcg
     2461 cacgcggtgg aagggagcag ccggtcgggt gtggcggtgg cgaggacgat ggcatcgaga
     2521 tccgcggccg tgagtcccgc ccggctgagc gccttctcgc tcgcttcgcg gctcagcatg
     2581 gcgacggtct ggtccggcgt ggcgatgtgg cgctcgcgga tgccggtccg ctccacgatc
     2641 cactcgtcgg aggtgtcgag catccgggtg aggtccgcgt tggtgagcac gccaggagga
     2701 acggctacgc cgatgctcgc catctcggcg atggggcgcc ggctcatgtt ggtgccgcgg
     2761 tttcgcgctg ggcgaactcg gcgccgatgt gcttgctcag atcggcctcc accgactgca
     2821 cggcgacccg gatggcgttc ttgatggcgt tggagggtga ggcgccgtga cagatgatcg
     2881 cgacgccctt gacccccagg agcggtgctc cgccatacgt ggagtagtca agaacccgga
     2941 agaggtcctt cagctccggt cgcgccagga gatcgggcac ccgctgcttg atcaacccga
     3001 tgatcaggcg gccgactgat tcgtagaact tgagcaccac gttgccgacg aagccgtcgc
     3061 acaccaccac gtcg
//
LOCUS       DASYRV010000319         5224 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_125468, whole genome shotgun sequence.
ACCESSION   DASYRV010000319 DASYRV010000000
VERSION     DASYRV010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5224
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125468"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..400)
                     /locus_tag="VGQ24_08295"
     CDS             complement(<1..400)
                     /locus_tag="VGQ24_08295"
                     /inference="COORDINATES: protein motif:HMM:NF015758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MazG nucleotide pyrophosphohydrolase
                     domain-containing protein"
                     /protein_id="HEV8454876.1"
                     /translation="MIFGTGDKMQDNSALGRATATVRDLRKRCPWDRAQTRETLRPYL
                     VEEALELDHALGEGDVAQIRGEVSDLLLHLAFQLVIAEERREFTADQVADELEAKMRR
                     RHPHLFDLGKGEPWEEIKRREREGHVLAGLV"
     gene            416..1504
                     /gene="alr"
                     /locus_tag="VGQ24_08300"
     CDS             416..1504
                     /gene="alr"
                     /locus_tag="VGQ24_08300"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEV8454877.1"
                     /translation="MTFPTDTSRAWVDVDLAALVANARTVAAVSGSRLLPMVKANGYG
                     LGAVEVARALESVDPWGFGVASVEEAAALRGAGITRPMLVVTPLVPQWIEQYLQLDLR
                     PAIGDHAALQAWTTRTDRPFHVEIDTGLSRAGVRWDDHVSLVALRSALGTAPGWEGVF
                     THFLSAESDTDTTVRQWDRFQEVVQSLPRCPALVHAANSAAALRGRGFAADLVRPGIF
                     LYGGAAGGPEPRPVAALRGRVVAIRSIAAGDTVGYGASWRADRPTVIATISVGYADGF
                     PRAAPGGAPTAARVVEVAGKLAPVVGRVTMDMCMAAVEYEVAIGDVATVFGGLVTLDR
                     QASAAGTISYELLTRLGARLPRRYERPT"
     gene            1501..1749
                     /locus_tag="VGQ24_08305"
     CDS             1501..1749
                     /locus_tag="VGQ24_08305"
                     /inference="COORDINATES: protein motif:HMM:NF020473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1844 domain-containing protein"
                     /protein_id="HEV8454878.1"
                     /translation="MNPHFASLVLGLAQQAEAALSGHLPQGAEGLGDSRKAAQTLIDT
                     LGMLAEKTAGRLDPDEKQLLEQAVTSLRFRYVQTMPKT"
     gene            1749..2915
                     /locus_tag="VGQ24_08310"
     CDS             1749..2915
                     /locus_tag="VGQ24_08310"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008973 - phosphopentomutase activity
                     [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA];
                     GO_process: GO:0043094 - cellular metabolic compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HEV8454879.1"
                     /translation="MRRAAIIVLDGVGIGPAHDADQYGDAGSNTLGNVARAVRRLSMP
                     RFEALGLGRCAEIPGVAPVVSPGAAHGVCEPASPGKDSTTGHWEICGLILDAPFPTFP
                     RGFPPALIAEFANRTGRGVLGNKAASGTAVLEEYGTEHCQNGDWIVYTSADSVFQVAA
                     HEGTVPLEELYAACATARELLTGEYGVSRVIARPFTGEPGAWKRTADRRDFSLAPPGP
                     TLLDRLAERQIPRVGVGKVDDLFARRGISSVHTGTNAEAYVLIEGALRAMRRGLLLAN
                     VIEFDQTWGHRNDVPGFHGGLLELDRALPRLLDGVREDDLVIFTADHGNDPTTPSTDH
                     SREVVPLLVLGPKVRPVDLGRRETFADIGQTVAEFLGVPALAAGTSFLSEVWLD"
     gene            2908..3294
                     /locus_tag="VGQ24_08315"
     CDS             2908..3294
                     /locus_tag="VGQ24_08315"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: protein motif:HMM:NF004064.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004126 - cytidine deaminase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009972 - cytidine deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HEV8454880.1"
                     /translation="MTDPLISAARSAQTRAYAPYSKFRVGAALEAMDGAVFAGCNVEN
                     ASYGLTICAERAAICAAVSAGAHRFRRAVVVSDVDPPAAPCGACRQVLAEFGLDLPIE
                     AVGSKRTVTWRLSELLPAPFGPEQLR"
     gene            3291..4514
                     /locus_tag="VGQ24_08320"
     CDS             3291..4514
                     /locus_tag="VGQ24_08320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454881.1"
                     /translation="MRGRYFVLLAALASAGCQEKLTAPADCPALCPGGSSEVFDEVIT
                     PIAGADSSFRGYVQAASAAGLLASNGLDGFETRAIMRFSRRSDTVTVRDTARAYAIDS
                     VAFGLNLLARDTTLAGLKILLYRVPASIDTTTTFAGVDPAFVPGNLIRTIDVPDTLKR
                     GAIRTVFSGVGLDSVLIPPADSGVLALGIRIDAPTTTGIRLGASGGGTGGVFVTYATL
                     DVPDTGTAKLRTFSLAATFNSYVTPPQPLPDTTLLVVGGEPSSRALLRFELPPHIRDS
                     ATIIRATLELTPVAPISGLPTDPARLQAKAVTADLGAKSPVSATAGRSGLFPPPADTV
                     EAGATTVSLEAVRLVETWLTPTTRPSALMLAFAPDIEAASFSRPVFYSTRAADPAVRP
                     RLHISYLRAFPFENP"
     gene            4515..>5224
                     /locus_tag="VGQ24_08325"
     CDS             4515..>5224
                     /locus_tag="VGQ24_08325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454882.1"
                     /translation="MRFASLLILLALLPGVSSAQSSQFGVRGLGFPGRGLAVRAAGSS
                     GAFGLFDPESSLNPAALGAVPTLTSVFVLTQDFRHTENPAGTASLRDNRFPLLSVAGP
                     VRSVAAFGISFSNYTSRDFTVVTADTLDIRGAPVGVTDSFSSRGGLNDLRLAGAYRVH
                     DRWTFGAGFHIITGSNRLESGRVFSDPSFLASVQRSEISYAGVGLSAGVIRQLGARLA
                     IAALLRTDGHVNVDRDSAR"
BASE COUNT          758 a         1763 c         1728 g          975 t
ORIGIN      
        1 gaacgagtcc agccagcacg tgtccttcgc gctcgcggcg tttgatttcc tcccagggct
       61 cgcccttgcc gagatcgaac aggtgggggt ggcgacgccg catcttggct tccagctcgt
      121 cggccacctg gtcggcggta aactcccgac gctcctctgc gatgacgagc tggaacgcga
      181 ggtggagcag cagatcgctc acctcacccc tgatctgcgc gacatcgcct tcacccagtg
      241 cgtggtcgag ctcgagcgcc tcctcgacca gatacggccg caacgtttca cgggtctgcg
      301 cccggtccca tgggcatcgc ttccgaaggt cccgcaccgt cgccgtggcg cgtccgagcg
      361 ctgagttgtc ttgcattttg tcccccgtgc cgaatatcat accgcccggc tcgccatgac
      421 ctttcccacc gatacatccc gcgcctgggt ggacgtcgac ctggcggcgc tggtcgcgaa
      481 tgcacgcacc gtagccgctg tcagcggtag ccggctgtta ccgatggtca aagctaacgg
      541 ctacggactc ggggcggtgg aggtcgcgcg ggcgctcgag tcggtcgatc cctggggctt
      601 cggcgtcgcg tccgtcgaag aagccgctgc tctgcgaggc gccggcatta cccggccgat
      661 gctcgtggtc acgccgttgg tgccgcaatg gatcgagcaa tacctccagc tcgaccttcg
      721 tcccgcaatc ggcgatcatg ccgcgctcca ggcctggacc actcgcaccg atcggccatt
      781 tcatgtcgag atcgacacgg gtctgagccg ggcaggtgtg cgatgggacg atcatgtctc
      841 actggttgcc ctgaggagcg cgctcgggac ggcgcccgga tgggagggcg tgttcaccca
      901 ttttctctcg gcggagtctg acaccgatac tacggttcgc cagtgggatc gcttccagga
      961 ggtggtccaa tcactgccgc ggtgcccggc gctggttcac gccgccaaca gtgctgctgc
     1021 gctacggggg cgcgggttcg ccgccgatct cgtacggccg ggcatcttcc tctatggagg
     1081 agcggccggc ggaccggagc cccgacccgt cgccgccctg cggggacggg tcgtcgccat
     1141 ccgatcgatc gctgccggcg acacagtcgg ctacggcgca tcatggcgcg ccgaccggcc
     1201 gactgtcatc gccaccattt ccgtcggcta cgctgacggg ttcccccgcg cggctcctgg
     1261 tggcgccccg actgctgccc gcgtggtcga ggtcgcgggt aagctcgccc cagtggtcgg
     1321 gcgggtcacg atggacatgt gtatggcggc cgtcgagtac gaggtcgcca tcggcgacgt
     1381 agccaccgtg ttcggtggtc tggtgaccct cgaccggcaa gcttcggccg ccgggaccat
     1441 ctcctacgaa ctgctgactc ggctgggggc caggctgcct cgccgctacg agaggccaac
     1501 gtgaatcccc atttcgcgtc gctggtcctg ggcctggccc agcaagccga ggccgcactg
     1561 agcgggcacc tgccgcaggg agccgaaggc ctcggcgatt cccgtaaggc ggcccagacc
     1621 ctcattgata ccttgggaat gctcgccgag aagacggccg gccgtctgga cccggacgag
     1681 aagcagctgc tggagcaggc ggtcacctcg ctgcgcttcc gttacgtgca aacgatgccc
     1741 aagacgtgat gcggcgggcg gccatcatcg tcctcgacgg ggtcggcatc gggccagctc
     1801 acgatgccga tcagtacggt gacgccggca gcaacacgct tggcaacgtg gcccgagcgg
     1861 tcaggagact gtcgatgccc cgcttcgagg ccctgggtct cggccgctgt gctgagatcc
     1921 ccggggtcgc gccggtggtg tccccgggag ccgcgcacgg cgtgtgtgag ccggccagtc
     1981 cagggaagga cagcaccacc gggcactggg agatctgtgg cctgatcctc gatgcgccgt
     2041 ttccgacctt tcctcgaggc tttccgccgg cgctcatcgc cgaattcgcc aaccgaaccg
     2101 gacgcggcgt gctgggcaac aaggccgctt cgggaaccgc ggtgttggag gagtacggca
     2161 ccgagcattg ccagaatggc gactggatcg tgtacacctc ggccgacagc gtttttcagg
     2221 ttgccgcgca cgaaggcacg gtgcccctcg aggagctcta tgcggcctgc gccacggcga
     2281 gggagctgct gacgggggag tacggcgtct cccgcgtgat cgcgcgaccc ttcaccggtg
     2341 aacccggtgc ctggaaacgg accgcagacc ggcgcgactt cagtctggcc ccgccgggtc
     2401 cgactctgct ggaccggctg gccgagcggc aaatcccccg ggtgggggta gggaaggtgg
     2461 atgatctgtt cgcccgccgc gggatcagca gcgtgcacac cgggaccaac gctgaggcct
     2521 acgtcttaat cgaaggcgcg ctccgcgcga tgcggcgagg attgttgttg gcgaacgtga
     2581 tcgagttcga tcagacctgg ggtcaccgca atgacgtgcc gggattccat ggcggccttc
     2641 tggagctcga tcgggcgctc cctcgtctcc tggatggggt cagggaagat gacctcgtta
     2701 tctttaccgc cgatcacggc aacgacccga cgactccctc taccgatcac tctcgggagg
     2761 tcgttccgtt gctggtgttg ggcccgaagg tacggccggt cgatctgggc cgccgtgaaa
     2821 cgttcgccga tatcggccag actgtggccg agtttctcgg ggtacccgcc ctcgcggcgg
     2881 gcacctcgtt tctttccgag gtttggcttg actgatccgc tgatctccgc ggcgcggagc
     2941 gcgcagacac gcgcgtatgc gccgtactcg aaattccgcg ttggagcggc cctcgaggcc
     3001 atggacggcg ccgtcttcgc aggctgcaac gtggagaacg cgtcgtatgg tctgactatc
     3061 tgtgccgagc gcgccgcgat ctgtgcagcg gtgagcgcgg gtgcgcaccg cttccgccgg
     3121 gccgtcgtgg tgtcggacgt ggatccaccg gccgccccgt gcggcgcgtg ccgccaggta
     3181 ctcgccgaat tcggcttgga tctgccgatc gaggcagttg gatcgaagcg gaccgtgacc
     3241 tggcgcctgt ccgagctcct gcctgcgcct ttcgggccgg agcagctgcg gtgaggggga
     3301 gatacttcgt gctgctggcc gccctcgcat ctgcgggctg ccaggagaag ctgaccgctc
     3361 ccgccgattg ccccgcgctc tgcccgggtg gctcgtctga agtgttcgat gaggtgatca
     3421 cccctatcgc aggggctgac agcagcttcc gcggctacgt tcaggctgcg tcggcggcag
     3481 ggctgctggc ctccaatggc ctggacggtt tcgagacccg ggccatcatg cggttctccc
     3541 ggcggagcga tacggtgacc gtccgggaca cggcgcgcgc ctatgcgatt gactccgttg
     3601 cgttcggtct caacctcctc gcccgcgaca ccaccctcgc gggcctcaag atcctgctgt
     3661 accgggtccc tgcctcgatc gatacgacga cgacctttgc gggtgtcgat cccgcgttcg
     3721 ttcctgggaa cctgatccga acgatcgacg tgccggatac gctgaagcga ggggcaatcc
     3781 ggaccgtctt ctcgggcgtg ggactagaca gcgtcctgat cccgccggcg gatagcgggg
     3841 tgctggcact cggcattcgg atcgacgccc ctactacgac cgggatccga ctgggcgcct
     3901 cgggcggcgg caccggcggg gtctttgtca cgtatgcgac attggatgtc ccggacaccg
     3961 gcaccgcgaa gctgaggaca ttcagtctcg cggcaacttt caactcctat gtcactccgc
     4021 ctcagccgct gccggacacg acgttgctgg tggttggagg cgagccatcc tcgcgagcgc
     4081 tgctccggtt tgagcttccg ccgcacatcc gggactcggc aaccatcatc cgggccacgc
     4141 tggagctcac gccggtcgcc ccgatctcgg gattaccgac cgatcctgct cggctccagg
     4201 caaaggcggt taccgccgac ctgggcgcga aatcgccggt gagcgcgacg gcgggccggt
     4261 cgggtctctt cccaccgccg gcggacaccg ttgaagctgg ggccaccacg gtgagtctcg
     4321 aggccgtccg gctggtagag acctggctca ctcccacaac tcgaccttcg gcgttgatgc
     4381 tggcgttcgc ccctgatatc gaagcggcca gtttctcccg gccggtcttc tactccacca
     4441 gggcggcgga tccggcggtg cgaccccggc tccacatcag ttatctccgc gcatttccgt
     4501 tcgagaatcc ctgagtgcgt ttcgcctctc tgctcattct gctcgcgctc ctgcctgggg
     4561 tgtccagcgc gcaatcctcc cagttcggcg tgcgcggcct cggctttccg ggacgcggtc
     4621 tggcggtacg ggcggcgggc agctcggggg cattcggact attcgatccc gagtccagcc
     4681 tgaatcccgc cgctctgggt gccgtgccga cactgaccag cgtctttgtt ctgacccagg
     4741 attttcgtca tacggagaac ccggcgggca ccgcctccct gcgggacaat cgctttcccc
     4801 tgctttcggt cgctggaccg gtgcggtcgg tcgccgcatt cggtatcagc ttctcgaact
     4861 acaccagccg cgatttcacc gtggtcacgg cagacactct cgacattcga ggcgcgcccg
     4921 tcggtgtgac cgattcattc tcctcccgag ggggattgaa cgatcttcgg ctggccggtg
     4981 cctatcgcgt tcacgatcgc tggaccttcg gcgccggctt tcatatcatc accggctcca
     5041 atcgactgga atcgggtcgg gtattcagcg atccgagctt tctcgccagc gtgcagagat
     5101 cggagatctc ctatgccgga gtcggcttgt ccgccggcgt catccgccag ctgggtgccc
     5161 ggctggccat cgccgcgctc ctacgaaccg atgggcatgt caacgtggac cgcgactcgg
     5221 cccg
//
LOCUS       DASYRV010000320        15916 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3388724, whole genome shotgun sequence.
ACCESSION   DASYRV010000320 DASYRV010000000
VERSION     DASYRV010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 15916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15916
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3388724"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..974)
                     /locus_tag="VGQ24_08330"
     CDS             complement(<1..974)
                     /locus_tag="VGQ24_08330"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEV8454883.1"
                     /translation="MTVSPARSPLTSHLSPVWTAGVRREVLPNGLTLLVQPDHSAPVV
                     AVVTHVKAGFFDEPDPWTGISHVLEHMFFKGTRMRGVGEIARETKSAGGYLNAGTGYD
                     HTSYFTVLPSSGLAAALDIQADALRNSIIDPDELSRELQVIIQEAKRKLDTAGAVAQE
                     TLHEVMFDRHRIRRWRIGHEADLAKLTRDDVWSYYRSRYVPERTIVAITGDLEPDQAF
                     ELAHAAYSGWPVAVGAVDRSPDEPPLREVRARTLRGDVSQAELVLGWRTIPPLHEDAP
                     ALDLAAAVLGSGRGSWLYRALREPGIVTSVSASNYAPTELGVFSISADL"
     gene            complement(1089..2207)
                     /locus_tag="VGQ24_08335"
     CDS             complement(1089..2207)
                     /locus_tag="VGQ24_08335"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEV8454884.1"
                     /translation="MSDAFLSSDDFDEQAHHLYNEGRYDEALIVLKEGIGLYPHAVEL
                     HIGRAYAHLAREEFAWARRSFEQALALDPDHEDGLAGLGETLLKLGDRAGAMRAVERI
                     LQLGFQDDHELMLQIGRALFREGLVAPAHRFFDLAASAHPESPDAAACLGYASHRMGN
                     DAGSLYWLRRALEIDASYSEARIYLANLLYDRGETEAALHHLERTQPEDHYDELGIWR
                     HIELKKTIYRLPDEDPELAPWLVRLGEVAGEPDAIDMLLAEVEAQHADGGVRDPHQLE
                     LFGTLLTELHAMQKKPAQAEAHLIMTLAGHTIRGTWDEILLQMKAADREWAHGSLSDF
                     MASLARRGQAETGVVIPTTDAEAFIRGSAEAGVLRIVQ"
     gene            2452..3114
                     /locus_tag="VGQ24_08340"
     CDS             2452..3114
                     /locus_tag="VGQ24_08340"
                     /inference="COORDINATES: protein motif:HMM:NF025605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEV8454885.1"
                     /translation="MPDRPPTQSTLQPRWQRRPEARPDEILDAARKVFGDCGFARAKV
                     DDVARVAGVSKGTLYLYFDSKETLFREMVRAKIVALLAKSEALLESHSGSSRDLLVRL
                     ITGMFHSMRDQEIVTISRVAQAEFASFPELAQFYFDEVIVRARRLVEKVLDRGIQAGE
                     FRAIPYGFGARALPSLLVHSVQVQCWFRKVDPEALSDEEALEGLIDFCLHGVLARPDS
                     RT"
     gene            3127..4440
                     /locus_tag="VGQ24_08345"
     CDS             3127..4440
                     /locus_tag="VGQ24_08345"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEV8454886.1"
                     /translation="MRYVLATLIGALAGLPSPLPAQAPAIPTGPIRLIDAINLGQRQG
                     VEAVVARLNLRAANARTAQRRADLLPNIGGRASLTRQTLNLDEFGIPVATGITDPFNI
                     YNIQLQASQTLFDASVITRLRAERDTAIAAGLDAQAVGEIAGATAGLAYLRVLSADET
                     VRAREADSTVAADLLDQARKLVQAGVNPAIDATRSEVSFAAVRTQLEIARNNADGARL
                     DLVRALDLPSGARLELADSLGLAPLEIPRQPDEAARFAREHRAELAAERARTQSARRS
                     LRAIRYENLPSLSANGAYIESGRETGTLAGSYNLQLLLNVPILDGFRRQNRSKEQSAR
                     VEIQELREHALANQVETEARQAVLDLSSAEQQVAIARERVRLAARELAEAQQRFQAGV
                     AGSVETTNAQSSVISAHDALIQARVNYGTARVSAYRALGVIDQLQ"
     gene            4465..5592
                     /locus_tag="VGQ24_08350"
     CDS             4465..5592
                     /locus_tag="VGQ24_08350"
                     /inference="COORDINATES: protein motif:HMM:NF012739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEV8454887.1"
                     /translation="MTTDAVQTPESAPARPRRRRLPLLILGVLVLALGTWAVQRYLYF
                     RHHVSTDNAQVDSHITLIAPRIAAFVSRVLVDDNQHVKAGDTLVILDDRDIKVRLEQA
                     EADLRAAEAAAGTRGRAGEANAQFQATRSQAASVEAGVIAAEADYKKAAADLERYRSL
                     AAQKIVPAQQLDAAQAAFEAAAAKLESARRQASAAGSQVSASGAAVRSAAARLAAAQA
                     AVDNARLDLSYARITAPTAGVIAKRNAETGALVQPGQSLMSIVPDRDVWVTANLKETQ
                     LTNVRVGDSVEFTVDAYPGRKFSGRVESLSPATGAKFALLPPDNATGNFTKVVQRVPV
                     KIAVEQSTDSTHLLRPGMSVDVDIATGTDSRRAPTSSAVAD"
     gene            5695..7164
                     /locus_tag="VGQ24_08355"
     CDS             5695..7164
                     /locus_tag="VGQ24_08355"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEV8454888.1"
                     /translation="MTFQRKLLLGFSLMVLPALLVGAEAIRSNLLERRALQALGQSMA
                     RTRTYAELETAMFDQSDIIWRYLTGMDPTAQKEFRLAGQVVDYWQQRWAAELRPEEMG
                     LADGVRGIQQQIQTVAESVFHLFDSGQRQAAFATAQRELKGRLLPALTQMNREIYRRA
                     RESSVRGAYTRLEEILASQERVLLIIVVLSLAGGLLGSWLISRSLARPINELTGAMAV
                     VGAGQLDHPIIPRSKDEVGELAVAFGRMTDNLRQSRADLVQSEKLASIGEMAAAVAHG
                     LRNPLASLRAAAQLVRQHPEAPSSREHLDAIVEEVDRLDRRISHLLSFSRPAPFHPLQ
                     ENVSRLVEGLLPAFSQLLRERGVELEVDLPGGLPDVRVDPMQLEQALVEIVSNALDAM
                     PTGGRLRIAASVDGHGAGTGYVTVEVADTGPGIPDHVLPSVCEPFFTTRQEGTGLGLA
                     IAKRYVEQNGGRLEIASRPGATSVRVRLPAAQAEATVPV"
     gene            7161..8564
                     /locus_tag="VGQ24_08360"
     CDS             7161..8564
                     /locus_tag="VGQ24_08360"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEV8454889.1"
                     /translation="MSGSTVLIVDDERTLARAVKAFLAQAGYEAEVASDAEQAIELLP
                     ALRPDVIFADVRLPGMSGIDLLRRIQEFDPAIPVIIMTAYGSIEGAVEAVKLGAFDYM
                     KKPVDLEELKLLADRARETALMKQELSYYRRRAASELPMAGVLGNSSAIRAVMDQVRQ
                     VAALNETPPVLITGETGTGKGLVARTLHSSGPRVGKPFIEVNCTALPASLMEAELFGY
                     ERGAFTDAKESKLGLFEAAEGGFLLLDEVGDLEPSLQGKLLRAIEERTVRRVGGIRDR
                     KIDVRILAATNRDLEREVQQGRFRSDLYFRLAVILLHLPPLRERGEDALILADHFLRR
                     FSAKYGKDVRRIDARARDVLLSYPWPGNIRELSHVIERAVLWSRDNTIDVEHLSLTTP
                     VRADTDGHEPAPEPPSSLPTPAELPTGVDLPQWERTMIERAMRDAGGNQTKAAQRLGI
                     SRDTLRYRLKKFGIQGG"
     gene            8930..9838
                     /gene="pqqB"
                     /locus_tag="VGQ24_08365"
     CDS             8930..9838
                     /gene="pqqB"
                     /locus_tag="VGQ24_08365"
                     /inference="COORDINATES: protein motif:HMM:NF003523.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqB"
                     /protein_id="HEV8454890.1"
                     /translation="MRVVLLGTAAGGGFPQWNCWCPICRTGRSDPRRAFPRSQSTAAV
                     SADGERWFLLNASPDIRAQLTCLSGTMPDGVRHVPIEGIVATDAELDHTVGIVLLREA
                     RWLQLYATSAVRSILERESRLLPVTKAFAEVEVTELPLGMQIPLRYRDGQSSGITVES
                     FEVPAGPPRFAPRAAAGHTVGLILRDEATGGACAFVPGCGDLDQSLLDRFEKTDLLLF
                     DGTFWSDDELVALGISDRRAREMDHLPVSGADGSLSRLARLTRPAKVYTHINNTNPML
                     IEDSPERETVERAGLQVGSDGTSFTI"
     gene            9835..10590
                     /gene="pqqC"
                     /locus_tag="VGQ24_08370"
     CDS             9835..10590
                     /gene="pqqC"
                     /locus_tag="VGQ24_08370"
                     /EC_number="1.3.3.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR02111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline-quinone synthase PqqC"
                     /protein_id="HEV8454891.1"
                     /translation="MTSTGTLSASALAAPPPPPVPVLDRPLDAEALAEGLRSFSTSYY
                     ANHPFHQLMHQGRLTPRQLQGWVANRLAYQRAIPRKDAAIISNCPDADVRREWIQRIV
                     DHDGSKPGTGGIEMWIRLGEALGIPREEMEDERHVLPGVRFAAEAYVTFCKTRPWIEA
                     VASSLTELFAPDLMRKRIAAFPEHYPWIRPEALEYFQTRLVQAPRDSRQGLRLVQQHC
                     TTVESQRRAFEALAFKLEMLWVMIDTIHNAYAE"
     gene            10587..10859
                     /gene="pqqD"
                     /locus_tag="VGQ24_08375"
     CDS             10587..10859
                     /gene="pqqD"
                     /locus_tag="VGQ24_08375"
                     /inference="COORDINATES: protein motif:HMM:TIGR03859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis peptide
                     chaperone PqqD"
                     /protein_id="HEV8454892.1"
                     /translation="MTLLGPDTVPRLWRLARLDFDPVRQRPVLLYPEGAVLLNDTGAA
                     ILELCNGSRTVDQIATILSERYRADVSADVTEYLSQMADRELVRAG"
     gene            10849..11943
                     /gene="pqqE"
                     /locus_tag="VGQ24_08380"
     CDS             10849..11943
                     /gene="pqqE"
                     /locus_tag="VGQ24_08380"
                     /inference="COORDINATES: protein motif:HMM:TIGR02109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018149 - peptide cross-linking [Evidence
                     IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqE"
                     /protein_id="HEV8454893.1"
                     /translation="MPDNVPTTLLAELTHRCPLHCPYCSNPLELIRAEAELTTDDWKR
                     VFSQARELGVLQLGLSGGEPMLRKDLEELAAHARQQGLYSTLVTSGLGLTRARAERLK
                     EAGLEHIQISIQDSDPEIAERIAGLRSVKHKQAAAALVRELGFAFTINVVLHRANLDR
                     IGEIIDMAAELGADRIELANTQYYGWGLQNRAALMPTREQVERSREIAERAIQRYRGR
                     MQITYVLPDYYEAYPKACYGGWGKVYLVVAPNGIVLPCHGATQITTLNFDNVRAHSLE
                     WIWNQSEAFRAFRGDSWMKEPCRSCPRKTVDFGGCRCQAFALTGDAANTDPVCTLTPL
                     RRIIDDALQEPSRPMDEFQYRHITDEPAAV"
     gene            11940..12869
                     /locus_tag="VGQ24_08385"
     CDS             11940..12869
                     /locus_tag="VGQ24_08385"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEV8454894.1"
                     /translation="MSGSPPAIEAERLGRDYGDTRALDALDLVVPPGGVLGLLGPNGA
                     GKTTTMLLLATLLTPTRGVARIFGHDVTRERRVVRRRLGLVFQENTVDALLTVSENLL
                     FAARLAGLGGRAAHEAVAAGLEWAGLGARAGTPARQLSGGWRRVVDIVRALLHQPDLL
                     ILDEPTVGLDPEHRERVWSLLESRRRDHGTTVLFSTHYLAEAEPADRVVLLSKGRVVA
                     SDSPAALKATIGVEVAEIEGPGAERLAQALCGLGAAQTRFRTERGYRVGLTGERDAVI
                     ELAGPAPGIVRFTLRPATLEDVYFARTQQMTST"
     gene            12866..13642
                     /locus_tag="VGQ24_08390"
     CDS             12866..13642
                     /locus_tag="VGQ24_08390"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8454895.1"
                     /translation="MSALNAVYGIVARDLTRTTRQTSRLLGGVARPFMWLLLVGSGYN
                     AIARLDGDLSYQAFVYPGIIVMAALFGAMLTAISTVYDREFGMLRLMLASPAGVPAVL
                     AGRTLAAALVGLLQGGIVLACAPLVVPVEPRAFIAAAGALSLACLSSSVLGLLVAVRL
                     RSVENFAGVINVVLFPLLFVSGALYPTRGMPQLLRLLAQANPVTYQVDLMRHAFGQPA
                     EFSVQLDILVLVLVTLVVFGLASLLFDTEQRFIGRRTATG"
     gene            complement(13639..14454)
                     /locus_tag="VGQ24_08395"
     CDS             complement(13639..14454)
                     /locus_tag="VGQ24_08395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454896.1"
                     /translation="MSVRAAMVSVLLWGGGSASLAQSHAVDVRYSAPQLNCAQFLETA
                     ESDIQTETSGRILKQTAGRRGVWQFRAKPAVDGVSLEGWLDSLSLWRKSRETTIRPDT
                     DGLLGGRYRGALSGSGAYLSQARPFVPDEVAEIAGMATALDDFFPPLPPRLLRPEQAW
                     SDASGVMIRRMADSGMSGTPLYRFELEVRREARSNPMPNDTASLRLRQLSREHGTFVW
                     HPLLGLLRRDRRIVVETSVPAGRAIRQPVRSRVEQRITVLRDLTIPPEHNGPC"
     gene            complement(14509..>15916)
                     /gene="pruA"
                     /locus_tag="VGQ24_08400"
     CDS             complement(14509..>15916)
                     /gene="pruA"
                     /locus_tag="VGQ24_08400"
                     /EC_number="1.2.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003842 - 1-pyrroline-5-carboxylate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006562 - proline catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="L-glutamate gamma-semialdehyde dehydrogenase"
                     /protein_id="HEV8454897.1"
                     /translation="ADRATIEAAVKAATEAQRDWGQWRFEDRAAVFLRAAELLATTHR
                     QLLNATTMLGQSKTAFQAEIDSACELIDFLRFNVHYAERIYREQPESSPGVWNRMDHR
                     PLEGFVYAITPFNFTAIGGNLPTAPALMGNAVVWKPAATAMLSNWHFFKLLQEAGLPP
                     GVINFLPGNSIEVSETLLAERQLAGIHFTGSTAVFQSLWRSVAHNLERYAGYPRIVGE
                     TGGKDFILAHSSADVDALAVGIVRGAYEYQGQKCSAASRVYVPDTLWPAVRDRVVGMI
                     EDIRVGDVADFRNFMGAVIDRRAFTKLRDHLEAAKRDSGVKILAGGGADDSVGFFVQP
                     TLLQVEDPVYRLMCEELFGPVLTAYVYPATRWHETLTLVDQTSPYALTGAVFARDRRA
                     LAEADRALRNAAGNYYINDKPTGAVVGQQPFGGARASGTNDKAGSVLNLLRWVSPRSI
                     KETLSPPKDYRYPFMQAE"
BASE COUNT         2671 a         5289 c         5177 g         2779 t
ORIGIN      
        1 agatcggcgc tgatgctgaa gacaccaagc tcggtgggtg cgtagttgct cgcggacacg
       61 gaagtcacga tccctggctc ccgcagcgct cggtagagcc agctgcctct acccgacccg
      121 agtacagcag cagccagatc cagcgccggt gcgtcttcgt gcagcggggg tatcgttcgc
      181 catccgagta ccagctcggc ctgacttaca tctccccgca gcgtgcgagc gcgaacctcg
      241 cggagtggcg gctcgtcggg cgagcggtcc accgcgccca cggctaccgg ccaaccgcta
      301 taggcggcat gcgccagctc gaaggcctgg tccggctcga gatctccggt gatggccacg
      361 atcgtccgct ccggcacgta gcgggagcga tagtacgacc agacatcatc gcgggtgagc
      421 ttcgcgaggt cggcctcgtg accaatccgc cagcgcctga tccggtgccg gtcgaacatc
      481 acctcgtgca gtgtctcctg ggccacggcg ccggctgtat cgagcttgcg cttcgcttcc
      541 tgaatgatga cctgaagctc ccggctcagc tcatcgggat cgatgatcga gttgcgcagc
      601 gcgtcggcct ggatgtcgag ggcggcggct agccccgacg atggaagcac cgtgaaatag
      661 ctggtgtgat cgtacccggt accggcgttg aggtagcccc ccgctgactt ggtttcccgg
      721 gcaatctcgc ccaccccgcg catccgggta cccttgaaga acatgtgctc cagcacatgc
      781 gagatcccgg tccaggggtc gggctcgtcg aagaagcctg ctttcacgtg ggtgaccacc
      841 gcgaccaccg gcgcggaatg gtccggctga accaggaggg tgaggccgtt cgggagcacc
      901 tcccggcgaa ccccggcggt ccagacaggt gagaggtgag aggtgagagg tgagcgggct
      961 ggggatactg tcattgcgct ggaccttggc cacaagaaag agagcgggat atccgaaaac
     1021 ctaaccggac aatccgctca ccgcctcacg cctcccctct tacttctcac ctcttacttc
     1081 tcacgctttc attgaacgat cctcaacacc cccgcctcgg cgcttcccct gatgaatgcc
     1141 tcagcgtctg tggttggaat gacgaccccg gtttcggcct gtccgcggcg ggccagactt
     1201 gccatgaaat cgctcagcga cccgtgcgcc cactcgcgat cggccgcctt catctgcaac
     1261 aggatctcgt cccaggtacc gcggatggtg tggcccgcca gcgtcatgat caggtgggct
     1321 tcggcctggg ccggcttctt ctgcatggcg tggagctcgg tgagcagggt gccgaagagc
     1381 tccagttggt gcggatcccg caccccgccg tccgcatgct gcgcctcgac ctcggccagc
     1441 agcatgtcga tggcgtcggg ttctccggcc acctcgccca gccgcacgag ccagggcgcg
     1501 agctccggat cttcgtcggg cagccggtag atcgtcttct tcagctcgat gtggcgccag
     1561 attcccagct cgtcgtaatg atcctccggc tgggtacgct cgaggtgatg cagggccgcc
     1621 tcggtctcgc cgcgatcgta gagcaggtta gcgagataga ttctggcttc actgtagctc
     1681 gcatcaattt ccagcgcgcg gcgcagccaa tacagcgagc ccgcgtcgtt ccccatgcga
     1741 tgggaggcgt agcccaggca ggccgccgcg tcgggcgatt ccggatgggc cgacgccgcc
     1801 agatcgaaga accgatgggc gggggcgacc agaccttccc ggaacagcgc tcggccgatc
     1861 tggagcatca actcatgatc gtcctgaaag ccgagctgca ggatgcgttc gacggcccgc
     1921 atggcaccgg cacggtcgcc gagcttgagc agagtctccc ccaggcccgc aagaccatcc
     1981 tcgtgatcgg gatccagcgc aagggcctgt tcaaagctcc gccgcgccca ggcgaattcc
     2041 tcccgagcga gatgggcgta ggctctgccg atgtgcagtt caactgcgtg ggggtataga
     2101 ccgatgcctt ctttgaggac gatcagggct tcatcgtagc ggccttcgtt gtagaggtga
     2161 tgggcttgtt cgtcaaagtc gtcggagctg aggaatgcgt ccgacatcgg cagggcctcc
     2221 cgcggctggt taccgacaaa ctacgatctt gcggcaagcg gagcaagaga actccaccgt
     2281 ctgaagccta gacgatgcac tcgcgatagg gggtgaccgg agtcactccc aatttcaacg
     2341 ggggaaccca tttaggctag atggcccagc gctggtgccg cgagggttga cgccgtcagt
     2401 tccggagtca ttttactgac tggtcagtta cttactcctg gaaagcaccg cgtgcccgac
     2461 cgtcctccca cccaatcgac gctgcaaccc cgctggcaac gccgccccga agcccggcca
     2521 gacgagatcc tcgatgccgc ccgcaaagtg ttcggcgatt gcggctttgc acgtgctaag
     2581 gtggatgacg tggcgcgtgt ggccggcgtc agcaagggga cgctttatct ctacttcgat
     2641 tccaaagaga cgctgtttcg ggaaatggtc cgggccaaaa tcgtcgcgct tctagccaag
     2701 agcgaagcct tgctggagtc gcattcgggg tcgtcccgcg accttctggt ccggttgatc
     2761 accggaatgt ttcactccat gcgcgaccag gagatcgtca ccatttcgcg agtggcccag
     2821 gcggagttcg ccagcttccc cgagctggcc cagttctact tcgatgaggt catcgtccgg
     2881 gcccgccgct tggtcgagaa ggtgctcgat cggggaatcc aggccggtga gttccgtgcg
     2941 attccgtacg gctttggcgc ccgggctctg ccgtccctcc tggttcattc ggttcaggtg
     3001 cagtgttggt tccgcaaggt ggatccggag gccttgagtg atgaagaggc gctcgaaggt
     3061 ctgatcgact tctgtctcca tggggtgctg gctcgccccg actcccggac ctgaggttcg
     3121 caagtcatgc gctacgtgct ggccacgctc atcggcgcgc tcgccggttt gccctctcct
     3181 ctcccggctc aggcgccggc catcccgacc ggcccgatca ggctgatcga cgccatcaat
     3241 ctcggccagc gccagggggt cgaagcggtg gtcgcgcgct tgaacttacg tgccgccaac
     3301 gcacggacgg cacagcgacg ggccgatctc ctgcccaaca tcggtggtcg cgcatcgctg
     3361 acgcggcaaa ctctgaacct cgatgagttc gggatccctg tggccaccgg gatcaccgat
     3421 ccgttcaaca tttacaacat ccagctccag gcctcgcaga ccctgttcga cgccagtgtt
     3481 atcacgcggc tacgggcaga aagggacact gcgatcgctg ctggattgga cgcccaggcc
     3541 gtcggtgaga ttgccggcgc aaccgcggga ctggcgtacc tccgcgtcct cagcgccgac
     3601 gagacagtgc gtgcccggga ggctgatagt accgtggccg cggatctact ggaccaggcg
     3661 cgcaagctgg tgcaagccgg agtgaacccc gccatcgacg ccacccgcag tgaggtgagc
     3721 ttcgccgcgg tgcgcaccca gctcgagatt gcgcgaaaca acgcggacgg tgcccgtctc
     3781 gacctggtgc gagcgctcga tctcccatcg ggggcccggc tcgagctggc cgattcactg
     3841 gggctcgcgc cactcgagat tccccgccag cccgacgagg ctgcccgctt tgcccgcgaa
     3901 caccgggccg agctcgcggc cgagcgcgcc aggacgcagt cggctcgtcg cagcctccgg
     3961 gcgatccggt acgagaatct gccgagtctt tcggccaacg gcgcctacat cgaaagtggc
     4021 cgggagaccg gaactctggc tggcagctac aacctgcagc tgctcctgaa cgttccgatc
     4081 ctcgacgggt tccgccgaca gaaccgctcc aaggagcaga gcgccagggt cgagatccaa
     4141 gagctccgag agcacgccct ggccaatcag gtcgaaaccg aggcgcgcca ggcagtgctc
     4201 gacctctcct cggccgagca gcaggtggcg atcgcgcgcg agcgggtccg cctggccgcg
     4261 agggagctgg cagaggcaca gcagcgcttc caggccggag tggcaggcag tgtcgaaacg
     4321 acgaacgcgc agagttcggt catttccgcg cacgatgcgt tgatccaggc tcgcgtcaat
     4381 tacggcaccg ccagggtaag cgcctatcgg gcgctcggtg tcatcgacca actccaatag
     4441 acgcaccaaa gcgagaatcg aatcatgacg accgatgcag tccagacgcc agagagcgct
     4501 ccggcccggc cgaggagaag gcggctcccc ctgctgattc tcggggtcct ggtgcttgcc
     4561 ctgggaacct gggcggtgca gcgctacctc tacttccggc atcacgtgtc gaccgacaac
     4621 gcccaggtcg acagccacat cacgctcatt gccccccgga tcgcggcctt tgtgtcccgg
     4681 gttctggtgg acgacaacca gcacgtgaag gccggtgata cgctggtcat tctggatgac
     4741 cgcgatatca aggtgcggct ggagcaggcc gaggccgacc tccgcgcagc tgaggccgca
     4801 gcagggactc gaggacgcgc cggggaagcg aacgctcagt tccaggccac tcggtcccag
     4861 gctgcctccg tggaggccgg tgtcattgct gccgaagccg actacaaaaa ggcggccgct
     4921 gacttggagc gctaccgcag cctcgctgcc cagaagatcg tcccggcgca gcagctcgat
     4981 gcggcacaag ctgccttcga agccgcggcg gccaagctgg aatcagcccg gaggcaagcc
     5041 tccgctgcgg gcagccaggt gtcggcttcg ggagccgccg ttcgcagcgc ggcagctcgg
     5101 ctggctgccg cccaggcggc agtggataac gcccgccttg acttgagtta cgcccggatc
     5161 accgctccca cggccggcgt catcgctaag cgaaatgccg aaaccggcgc cttggtccag
     5221 cccggccaga gtctcatgtc gatcgtgcct gaccgggacg tgtgggtgac ggccaacctc
     5281 aaggagaccc agctgaccaa cgtgcgcgtc ggcgactcgg tcgagtttac ggtggacgcc
     5341 tatcccggcc ggaagttctc ggggagggtg gagagcctga gccccgccac gggcgccaaa
     5401 ttcgcgctgc tgcccccgga taatgccacc ggaaatttca ccaaggtggt gcagcgggtc
     5461 ccggtcaaga tcgcggtgga gcagtcgacc gactcgactc acctccttcg gccaggcatg
     5521 tcggtcgatg tcgacattgc caccggcaca gatagcaggc gcgcgccgac cagctccgca
     5581 gtggccgact aaggggaaga actgcagctt cggggccgtc tgctccaccc ctcctggcgt
     5641 tagcataaaa tgttccccga tcccggggtg ctaggaacgc gttaggtttc ccacgtgacc
     5701 ttccagcgca aattgctgct tggcttttcg ctcatggtcc tccccgccct gctggtcggg
     5761 gctgaggcga tccggagcaa tctcctcgag cgccgggcac tccaggcgtt ggggcaaagc
     5821 atggcgcgga cccggacgta cgccgagctc gagacggcga tgttcgacca gagcgacatc
     5881 atctggcgct atctcaccgg tatggatccc accgcccaaa aggagttccg cctcgcggga
     5941 caggtggtcg actattggca acagcgctgg gccgcagagc ttcgccccga ggagatggga
     6001 ctggccgatg gggtacgcgg catccagcag cagattcaga ccgtggctga aagcgtgttc
     6061 cacctcttcg actcgggcca gcggcaggcg gcgtttgcca ccgctcagcg cgagctcaag
     6121 ggccggcttc ttcccgccct cactcagatg aaccgggaga tctaccggcg agcgcgcgag
     6181 tcgagcgtac ggggcgccta cacccggctc gaggagatcc tcgcctcgca ggagcgcgtc
     6241 ctcctgatca tcgttgtcct ttccctcgcc ggcggcctgc tcggctcctg gctcatctct
     6301 cgtagtctgg cccgcccaat caacgagctg acgggtgcta tggccgtggt gggtgccggc
     6361 cagctcgatc acccgatcat ccctcgctcc aaggatgagg tcggggagct ggcggtggca
     6421 ttcgggcgga tgaccgacaa tctgcgccag tcccgggctg acttggttca atcggagaag
     6481 ctggcctcga tcggcgagat ggcggcggcc gtggcacatg gcctcaggaa ccccctcgcc
     6541 agcctgcgcg cagcggcgca actggtgcgg cagcatcccg aggctccgtc ctcccgagag
     6601 catctcgatg ctatcgtcga ggaggtggac cggctggacc gccggatcag ccacttgctg
     6661 agcttctccc ggccggcgcc gttccatcca ctgcaggaga acgtttcccg tctggttgaa
     6721 ggcctgctgc cggccttctc gcagctgctg cgggagcgcg gtgtcgagct cgaggtcgac
     6781 ctcccgggcg ggctgccaga cgttcgggtg gacccgatgc aactggagca ggccctggtc
     6841 gagatcgtct ccaacgcact cgacgcgatg cccaccgggg gtcggctgcg catcgccgcg
     6901 tcggtcgatg gacacggcgc gggcaccgga tacgtcaccg tcgaggttgc cgataccgga
     6961 cccggaatcc ccgatcacgt ccttccctcc gtctgtgaac cattctttac caccaggcag
     7021 gaggggactg ggctggggct ggctatcgcc aagcgatacg tggagcagaa cgggggacgg
     7081 ctcgagatcg ccagccggcc cggcgcgacc agcgtgcggg tgcggctgcc ggctgcgcag
     7141 gccgaggcga ccgtcccggt atgagcggct cgaccgttct catcgtggac gatgagcgca
     7201 ccttggctcg ggcggtgaag gccttcctcg cccaggcagg ctacgaggcc gaggtcgcga
     7261 gtgacgcgga gcaggccatc gagctgcttc ccgcactgcg tccggacgtg atctttgccg
     7321 acgtgcggct gccgggcatg agcggcattg acctcctccg acggatccag gagttcgatc
     7381 ccgccatccc ggtcatcatc atgaccgcat acggctcaat cgaaggtgcg gtcgaggcgg
     7441 tcaagctcgg tgcattcgat tacatgaaga agccggtgga cctggaggag ttgaagctcc
     7501 tggccgaccg ggcccgcgag actgccctga tgaagcagga gctttcctac tatcggcggc
     7561 gcgcggccag cgagctgccg atggcgggag tactcggcaa ctcctcagct attcgcgcgg
     7621 tcatggacca ggtccgccag gtcgccgcgc tgaacgagac tccgccggtc ctcatcaccg
     7681 gggagaccgg caccgggaaa ggactggtcg cccgcacgct ccacagctcc ggcccccggg
     7741 tggggaagcc gttcatcgag gtgaactgca ccgccttgcc ggcgagcctc atggaagcgg
     7801 agctctttgg ctacgagcgt ggcgcgttca ccgatgccaa ggagtcgaag ctgggcctgt
     7861 tcgaagcggc cgaaggcggc tttctgctcc tcgacgaggt cggcgacctg gagccctcgc
     7921 ttcaggggaa gctgcttcgg gccattgagg agcggaccgt gcgccgggtg ggcgggatcc
     7981 gcgaccgcaa gatcgacgtt cgcattctcg ctgccacgaa ccgggatctc gagcgggaag
     8041 tgcaacaggg ccgtttccgc agcgacctgt atttccgcct ggcggtgatc ctgctccacc
     8101 tcccgccctt acgggagcgg ggcgaagacg ccctgatact cgccgaccat ttcctgcggc
     8161 gcttcagcgc caagtatggg aaggacgttc gccggataga cgcgcgggcc cgggacgtgc
     8221 tgctctcgta tccctggccc gggaacatcc gggagctcag tcacgtcatc gagcgcgccg
     8281 tgctctggag ccgggacaac accattgatg tcgagcacct ctcgttgacg acccctgtcc
     8341 gggcggacac cgacgggcac gagcctgccc ctgagccccc ttcctcgctc cccaccccgg
     8401 ccgagctccc gaccggagtg gacctccccc agtgggagcg caccatgatc gagcgggcca
     8461 tgcgcgatgc cggcggcaac cagaccaagg cagcgcaacg gctcggaatt agccgcgaca
     8521 cccttcgcta ccgactaaag aagtttggca tccagggtgg gtgaaaacac ccacattggt
     8581 ttggaagccc caatcctggc tatcatccgg gcggcaaccg tccgacccaa tcaccagact
     8641 caatggtttg aaggaaaaag acttaggtcc aggactccca ccgctcatcg gcttggcacg
     8701 ccccctgctt tatcgccggt gtcgtcgggt cgctcgagga ccctactggg tgaaagcacc
     8761 caggcgagtt tcctaaaaga gcctaccaca aaccgcggag ctacaatgac ctggaccaaa
     8821 cccgaagctg aagtcgtggc cgtcacgatg gaagtcactg cctacgtcgc gacgctctaa
     8881 ccagagctga tctcaagggc tcgcgtaagc gggcccttcg gctttccagt tgcgcgtcgt
     8941 tcttctcggt actgcggccg gtgggggctt tccgcagtgg aactgctggt gccccatctg
     9001 tcgcacgggt cggtccgatc cgcgtcgcgc gttccctcgt agccaatcca cggcagcggt
     9061 cagcgccgac ggtgaacgct ggttcctgct caatgcctca cccgatattc gcgcccagct
     9121 cacctgcctg tccggaacca tgcctgacgg ggttcgccac gtcccgatcg aagggatcgt
     9181 cgcgacggat gccgagctgg atcatacggt gggcatcgtc cttctgcgcg aagcccggtg
     9241 gcttcagctg tacgccacct ctgccgtgcg gtcgattctg gagcgggagt cgcgcctctt
     9301 gccggttacc aaggcattcg ccgaggtcga ggtgacagag ctgccgcttg ggatgcaaat
     9361 cccgctccga tatcgagacg gacagagcag cggtatcacg gtggagtcct ttgaggtgcc
     9421 tgcgggccct ccgcgctttg cgccccgtgc cgcagccggg cacactgtcg ggctaatcct
     9481 ccgggacgag gcaaccgggg gcgcctgcgc cttcgttccc gggtgtggcg atctcgatca
     9541 gtcgctgctc gaccgcttcg agaagaccga cctcctgctg ttcgatggca ccttctggag
     9601 cgacgacgag ctggtagcgc tcggcatcag tgaccgccgg gcgcgggaga tggatcacct
     9661 gcccgtgtcc ggcgctgacg ggagtctttc tcgtctggct cgtctcacgc gccctgcgaa
     9721 ggtctacacc cacatcaaca acaccaatcc gatgctgatc gaggattcgc ccgagcggga
     9781 aaccgtcgag cgggcggggc tgcaggtggg ctcggacggc acgagcttta cgatatgacc
     9841 agcacgggga cgctgagtgc ttcggcgctg gcggctccgc cgcctccacc cgtcccggta
     9901 ctggatcggc cgctcgacgc cgaggcgctg gccgagggtc ttcggtcgtt cagcacctcc
     9961 tactacgcga accacccgtt ccatcagctc atgcaccagg ggcgcctgac gcctcggcaa
    10021 ctccagggct gggtggcgaa ccggctggcg taccagcggg ccataccccg gaaggacgcc
    10081 gcgatcattt cgaactgccc ggacgctgac gtgcggcgtg agtggataca acggatcgtc
    10141 gatcacgacg gcagcaagcc agggacgggc ggcatagaga tgtggatccg cctgggggag
    10201 gccttgggta tccctcggga ggagatggaa gacgagcggc acgtgctgcc tggggttcgc
    10261 tttgccgccg aggcatacgt gacgttctgc aagacgagac cgtggatcga ggccgtggcg
    10321 tcgtcgctca ccgagctctt tgcccccgac ctcatgcgga agcggatcgc cgcctttccg
    10381 gagcattatc cctggattcg gccggaggcg ctggagtatt tccagaccag gctggtccag
    10441 gctccgcgag acagccggca ggggcttcgc ctggtccagc agcattgcac gaccgtggag
    10501 agccaacgca gggcgttcga ggcgctggca ttcaagctcg agatgctctg ggtgatgatt
    10561 gataccattc acaacgcgta cgccgaatga cgctactcgg tcccgacacc gtgccccgcc
    10621 tctggcggct cgcccggctg gacttcgacc ccgtgcgcca gcggcctgta ctgctctacc
    10681 ccgagggtgc cgtattgctg aacgataccg gggctgcgat cctcgagctc tgcaacggga
    10741 gccgcaccgt ggatcagatc gccaccattc tctctgagcg ctaccgcgcc gacgtgagcg
    10801 cggatgtcac ggagtatctg agccagatgg cggatcggga gctggtacgt gccggataac
    10861 gttcccacca cactgttggc ggagctgacc caccgctgcc cgctccactg cccctattgc
    10921 tccaaccctc tggagctgat ccgggcagag gcagagctga caacggacga ctggaagcgg
    10981 gttttctccc aggctcgcga gctcggcgtg cttcagctcg gactgtcggg cggtgagcct
    11041 atgttgcgga aggacctgga ggagctcgcc gcccacgcgc ggcagcaggg gctgtactcg
    11101 accctggtga cctccgggct gggactgact cgtgcccgcg ccgaacggct gaaggaggcc
    11161 gggctcgagc acatccagat ctccattcag gactccgacc ctgagatcgc ggagcgtatt
    11221 gcgggcctgc gctcggtcaa gcacaagcag gcggcggcgg cgctggtgcg agagctgggg
    11281 tttgccttca cgatcaacgt cgtgctccac cgcgccaacc tcgaccggat cggggaaatt
    11341 atcgacatgg ccgccgagct cggtgccgac cggatcgagc tggcgaacac gcagtactat
    11401 gggtggggcc tgcagaaccg ggccgcgctc atgcccaccc gcgagcaagt cgaacgctcg
    11461 cgggagattg ccgagcgggc cattcagcgg taccgggggc ggatgcagat cacctacgtc
    11521 ttgcccgact actacgaggc ctaccctaag gcctgctatg gcgggtgggg caaggtctac
    11581 ctggtagtgg cccccaacgg catcgtcctt ccctgccacg gggccacgca gatcactacc
    11641 ctgaatttcg acaacgtgcg ggcgcattcc ttggagtgga tctggaacca gtccgaggcg
    11701 ttccgggcct tccgcgggga cagctggatg aaggagccgt gccgctcctg tccgcggaag
    11761 acggtcgatt tcggcggatg ccgctgccag gcttttgccc tgaccggcga tgcggcgaat
    11821 acggacccgg tctgcacgct cactcccctg cgccgcatca tcgacgacgc gttgcaggag
    11881 ccgtcccgtc ccatggacga gtttcagtac cgccacatca ccgacgagcc cgccgcggtg
    11941 tgagcggatc gccgcccgct atcgaagccg agcggctcgg acgcgattac ggcgatacgc
    12001 gggcgctcga cgcgctcgac ctcgtggtgc ccccgggagg ggtgctcggc ctcctcggtc
    12061 ccaacggcgc cggcaagacc acgacgatgc tgctcctcgc caccctgctg actcctaccc
    12121 gtggcgtggc gcgaattttt ggtcatgacg tcacccgcga gcgccgagtt gtccggcgga
    12181 ggctcggcct cgtgtttcag gagaacacgg tggacgccct gctgacggtg tcggagaatc
    12241 tgctcttcgc cgcgcgcttg gcggggctgg gagggcgcgc cgcgcacgag gcggtcgccg
    12301 ccggcctgga gtgggccgga ctcggggctc gtgccggcac gccggcccga cagctctccg
    12361 gcggctggcg ccgggtcgtg gacatcgttc gtgccctgct gcaccaaccc gatctcctca
    12421 ttctcgacga gccgaccgtg ggcctcgacc cggaacaccg ggagcgggtc tggtcgctgc
    12481 tggagagccg ccgccgagac cacggcacca ctgtcctgtt ctctacccat tatctggccg
    12541 aggccgagcc ggccgaccgg gtggtgctcc tctccaaggg ccgggttgtg gcgagcgact
    12601 caccggcggc gctcaaggcc actatcggtg tcgaggtcgc cgagatcgag ggccccggcg
    12661 ccgagcggct ggcccaggct ctatgcggcc tcggcgctgc gcagaccaga tttcgcaccg
    12721 agcgtggcta ccgcgtagga ctcaccgggg agcgcgatgc cgtgatcgag ctggcaggac
    12781 cggcgccggg aattgtgcgc ttcaccctcc gcccggcaac actggaggac gtttacttcg
    12841 cacgaaccca gcaaatgacg tcgacatgag cgcactgaac gcagtgtacg gcatcgtggc
    12901 gcgagacctg actcgtacca cccggcagac cagccgtctg ctgggcggtg tggcgcggcc
    12961 gttcatgtgg ctgctgctgg tggggagcgg atacaacgcc attgcgagac tcgatggcga
    13021 cctctcatac caggccttcg tctatcccgg gatcatcgtg atggcggcgc tgttcggcgc
    13081 catgttaacc gcgatttcga cagtctatga ccgggagttc ggcatgttgc ggctgatgct
    13141 ggcgagcccg gctggcgtgc cggccgtgct ggccggacgg acgctggcgg cagccctggt
    13201 gggattactg cagggtggca tcgtgttggc gtgcgcgccg ctggtagtgc cggtggaacc
    13261 gcgcgccttc atcgcggcag caggtgcctt atcactcgct tgtctttcaa gcagcgtgct
    13321 cgggctcctc gtggctgtcc gtctaagatc ggtcgagaac ttcgccggtg tgatcaatgt
    13381 cgtgttgttt ccgctgttgt tcgtgagcgg cgcgctgtac ccgaccaggg gcatgccgca
    13441 gctccttcgg ctgctggcgc aggcgaaccc ggttacctat caggtcgacc tgatgcggca
    13501 cgcctttggc cagccggccg agttctcggt gcagctcgac attctggtgc tggtgctggt
    13561 cacactggtg gtattcggat tggcgtctct gctgttcgat accgagcagc ggttcatcgg
    13621 ccggaggacg gccaccggtt agcaggggcc gttatgctcc ggggggatgg tgaggtcgcg
    13681 aagtaccgtg atccgctgct cgactcgcga gcgcaccggc tggcggatcg cgcgccccgc
    13741 aggaaccgac gtttcaacca cgatccgccg gtctcgtcgc aggagcccaa gcagggggtg
    13801 ccaaacgaac gtcccgtgct cccggcttag ctggcgaagc cggagcgaag cggtgtcatt
    13861 cggcatggga ttgcttctgg cctcccgcct gacctccagc tcgaagcggt agagcggagt
    13921 ccccgacatt ccgctgtcgg ccatccgtcg aatcatgacc ccggacgcgt cgctccaggc
    13981 ttgttccggc cggagcagcc ggggtgggag aggcgggaag aagtcgtcga gtgcggtggc
    14041 catcccggca atctccgcca cctcatcggg tacaaacggg cgagcctggc tgaggtaggc
    14101 gccggacccg ctcagcgcgc cacgatagcg cccgcccagc aagccgtccg tatcaggacg
    14161 tatcgtggtc tcccgggatt tgcgccacag cgagagtgag tccagccatc cctccagcga
    14221 cactccgtcc accgccggct tggcccgaaa ctgccagacg cctctccgtc ccgccgtctg
    14281 ctttaggatc cgaccactgg tctcggtctg aatatcggat tcggccgtct ccagaaactg
    14341 ggcgcagttg agctgaggtg cgctgtagcg cacgtcgacc gcatggctct gcgcgaggct
    14401 tgcactcccc cctccccaca gcaggaccga caccattgct gcccgcacgc tcatctcgcc
    14461 tcgctcgccg acaaaatgcc agagtcctca gatcccgata gctccctcct actccgcctg
    14521 catgaagggg tagcgatagt ccttcggtgg gctcagggtc tccttgatgc tccggggcga
    14581 gacccaccga agcaggttca acaccgatcc ggccttgtcg ttggttccgc tggcgcgcgc
    14641 gccgccgaac ggctgctggc ccaccaccgc tccggtcggc ttgtcgttga tgtagtagtt
    14701 gccggctgcg tttcggaggg ctcggtccgc ttcggccaac gcccgccggt cgcgggcaaa
    14761 cacggcaccg gtcagcgcgt agggactggt ctggtccacc agcgtaagcg tttcatgcca
    14821 gcgggtcgcg ggatacacgt aagccgtaag cacgggaccg aacaactcct cgcacatcag
    14881 ccggtaaacc ggatcctcga cctggagaag ggtcggctgg acgaagaacc ccactgaatc
    14941 atcggcgccg ccccccgcca ggatcttcac ccctgagtct cgcttggccg cctccagatg
    15001 gtcccgcagc ttcgtgaagg cccggcggtc gatcaccgca cccatgaagt tacggaagtc
    15061 ggccacgtcc cccacccgga tgtcctcgat catcccgacg acccgatccc gcaccgcggg
    15121 ccacagcgtg tcggggacgt agacccgcga tgcggcgctg cacttctgcc cttgatactc
    15181 atacgcccca cgaacgattc ccacggccag cgcgtccacg tccgcgctgg agtgagccag
    15241 aatgaagtcc ttgcctccgg tctcacccac gatccgggga tacccggcgt accgctccaa
    15301 gttgtgcgcc accgaccgcc acaggctctg aaagacggcg gtggacccgg tgaaatggat
    15361 accggccagt tgccgttccg cgaggagcgt ttcgctgacc tcgatcgaat ttccggggag
    15421 gaagttgatg acgcctgggg ggagcccagc ctcttggagc aacttgaaga agtgccagtt
    15481 actgagcatc gccgtggcgg ccggtttcca caccacggcg ttgcccatca aagccggagc
    15541 ggtcgggaga ttgccgccga tcgcggtgaa attgaacggc gtgatggcat acacgaagcc
    15601 ctcgagcggc cgatgatcca tgcggttcca gaccccgggc gacgactccg gctgctcgcg
    15661 gtagatccgc tcggcatagt gcacattgaa ccgcaggaag tcgatcagct cgcacgcgct
    15721 gtcgatctcg gcctggaacg cggtcttgct ctggcccagc atggtcgtcg cgttcaggag
    15781 ttgccggtgg gtcgtcgcca gcagctcggc ggccctgagg aagaccgccg cccgatcctc
    15841 gaagcgccac tggccccaat cgcgctgcgc ctctgttgcg gccttcaccg cggcttcgat
    15901 ggtagcccga tccgcc
//
LOCUS       DASYRV010000321         2980 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3652682, whole genome shotgun sequence.
ACCESSION   DASYRV010000321 DASYRV010000000
VERSION     DASYRV010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2980
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3652682"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            182..1996
                     /locus_tag="VGQ24_08405"
     CDS             182..1996
                     /locus_tag="VGQ24_08405"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEV8454898.1"
                     /translation="MWLKRWLLGHPLKTSQAAHERLSNPVALAVFSSDPLSSVAYATE
                     EILLVLVLAGTAALHYSLGISLVIVGLVAIVTASYRQTIYAYPSGGGAYVVAKSTLGE
                     PPGLVAAAALLIDYVLTVAVSVAAGIAAITSAVPELHEHRVGLGLLAIAILTWGNLRG
                     VRESGRIFAMPTYMFVGGLGLVILVGLGRTLFGAGEAHPPPAVPAVEGLTLFLLLRAF
                     SSGCTALTGIEAISNGVPAFRPPASKNAATTMIWMAAILGSLFLGLTMLAYVYGLVPR
                     EEETLISQIARISLGGGFLYYFMQVATMLILILAANTSFNGFPRLASLLAQDSFLPHQ
                     MRSVGDRLAFSNGIFILGLSAALLLIIFQGDPHALIPLYAIGVFLSFTLSQAGMVRHW
                     QDRKGRGWRKKFAINLTGAVATGVATVVLAVTKFTHGAWMVIVLIPLLIGMFKKIQWH
                     YRMADWQLSLAMYDRPKQPPPNVVVMPIGSVNRAVVIALDYVRQRAQDIRAVHVDVDP
                     EETVKVKADWEKWGAGIPLVILPSPYRSFIQPLLDYTEKVRQENPGGWVTVVLGEVLP
                     ARWWENLLHNQRALLIKAALLFKFRVIVTDVPYHLGSY"
     gene            2392..>2980
                     /locus_tag="VGQ24_08410"
     CDS             2392..>2980
                     /locus_tag="VGQ24_08410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454899.1"
                     /translation="MFAPTAGAAPAAKTSPVIAAAKQYAEAIASGDRVAFGRLDFGCQ
                     FALVSTAAAPFRDFPPESDPVYGQCWTILVQAHDTAVELRDEGVNAIWPGKGFLVFYR
                     NQLTSYSPSFYVMARLGLSPPGTGLRVKPVDSAPIPAASFRMRPGAPLVSVPAAVVRL
                     RVTYKDPITSPVTYAPEEYNLTDTVKTAAQALKAVT"
BASE COUNT          461 a          962 c          942 g          615 t
ORIGIN      
        1 agtacgacca gttcgggcgc gtccgcaagg tggacgacgc gccgcccgtc ccgccgcagg
       61 acctctcgaa atgaattggg gacagattta tttttcaatt gcattgcacc gtctgccagt
      121 ctgcttgcgt gatcgtggaa aataaatctg tccccattaa tgaacgcatg ggtgagcggc
      181 gatgtggctg aagcgctggc tgctcggcca tcccctgaag acctcccagg ccgcccacga
      241 gcggttgtcg aaccccgtcg cgctggcggt cttctcgtcg gacccgctct cctcggtcgc
      301 ctacgctacc gaggaaattc tcctcgtcct ggtgctggcc ggcacggccg ccctgcacta
      361 ctccctcggg atcagcctcg taatcgtcgg cctggtggcc attgtcactg cttcctaccg
      421 tcagaccatc tacgcctatc cgtcgggcgg cggggcgtat gtcgtggcca agtccaccct
      481 gggcgagccc cccgggcttg tcgcggccgc ggccctgctg atcgactacg ttctcacggt
      541 ggccgtgagc gttgcggcgg gaatcgccgc gatcacctcg gcggtgccgg aattacacga
      601 gcatcgcgtg gggttgggtc ttctggcaat cgccatcttg acctggggta acctccgagg
      661 agtccgggaa tcgggacgga tcttcgcgat gccgacctac atgttcgttg gcggcctggg
      721 gttggtgatc ctcgtcggct tagggcggac gctcttcggt gccggggagg cgcacccgcc
      781 cccggctgtt ccggcggtgg aagggctcac gctgtttctg ctccttcgcg cgttctcctc
      841 cggctgcacc gccttgaccg gcatcgaggc gatctcgaac ggcgtgccgg ccttccggcc
      901 cccggcctcg aagaacgcgg cgaccaccat gatctggatg gctgcgatcc tgggaagctt
      961 gtttctgggt ctcaccatgc tggcctatgt ctacgggctc gtgccgcgag aggaagagac
     1021 gctgatctcc cagatcgcgc gaatctcact cggcgggggt ttcctgtact atttcatgca
     1081 ggtcgcgacg atgctgatct tgatcctcgc ggcgaacacg agcttcaacg gctttccgcg
     1141 cctagcctcc ctgctggcac aggacagctt tctgccgcac cagatgcgca gtgtcggcga
     1201 ccggttggcg ttctcgaacg ggatcttcat cctggggctg agcgcggcgc tcctgctgat
     1261 catcttccag ggcgacccgc acgcgttgat cccgctgtac gccattgggg tctttctgtc
     1321 ctttaccctc tcccaggcgg gcatggtccg gcactggcag gaccgcaagg gccgcggctg
     1381 gcggaagaag ttcgcgatca atctgaccgg cgccgtcgcg accggcgtgg ccaccgtggt
     1441 cctggccgtc acgaagttca cgcatggcgc ttggatggtg atcgttctga tcccactgct
     1501 catcggcatg ttcaagaaga tccagtggca ctacaggatg gccgactggc agctgtcgct
     1561 ggccatgtac gaccggccta agcagccacc gccgaacgtt gtggtgatgc cgatcgggag
     1621 cgtgaaccgg gcggtcgtca tcgccttgga ctacgtccgg cagcgggcgc aggacatccg
     1681 tgcagtgcac gtggacgtgg atcccgagga gacggtgaag gtcaaggcgg actgggagaa
     1741 gtggggcgcc ggcattcccc tggtgatcct gccctcgccg tatcggtcgt tcatccagcc
     1801 gttgctcgac tataccgaaa aagtccggca ggagaatccc ggcgggtggg ttacggtcgt
     1861 gctgggggag gtccttcccg cacgctggtg ggagaacctc ctgcacaatc aacgcgcttt
     1921 gctgatcaag gctgcgctac tcttcaaatt ccgcgtgatc gtcaccgacg tcccctacca
     1981 cctgggatcg tactaagcca gaatcatcca tgaataccta ctgctgcggc cgatcctctc
     2041 gcggggttgg ccattgctct tcaagttgca atgggccatc ggctcttctc ctcaacgtac
     2101 tgatgacccg ttgcattctg aagagcaacg ggtgccccgt acgcctgcgt cgtcctcagt
     2161 tgcgaggagc cgatgacccg ttgcatcttg gggagcaaca ggtgccccgc ttcggtctca
     2221 gccgcctcgc tacggcatcc atggataatc ctggcttggt ctttgcgtac ctctcgcact
     2281 ttcggtgtca aacgacgccg tgatagagta ctacccatgc gtgtggcgcc ttcccgaacc
     2341 attctgacgt cagctttggt ggtggctgcg acaggcctgt ggtgggtgcc tttgttcgcc
     2401 ccgactgcgg gagcggcgcc ggccgccaag acctcaccgg tgatcgcggc ggccaagcag
     2461 tatgcggaag ccatcgcctc gggcgatcgg gtggcgttcg ggcggctcga cttcggctgc
     2521 cagttcgcgc tggtgtcgac cgctgccgcg ccgttcaggg actttccgcc tgagtccgat
     2581 ccggtctacg ggcagtgctg gacgatactg gtccaggccc atgacaccgc tgtcgagcta
     2641 cgggacgagg gggtgaacgc gatctggccg ggcaagggat tcctggtgtt ctacaggaac
     2701 cagctcacca gctactcacc gtcgttttac gtcatggcgc gactgggctt gtcccctccg
     2761 ggcactggtc ttcgggtcaa gccagtggac agtgccccca ttccggccgc ctcgttccgg
     2821 atgcgcccgg gcgcgccctt ggtgtccgtg ccggccgcgg tggtcaggct ccgggtcacc
     2881 tacaaggatc cgatcacctc gccggtcacg tacgcgcccg aggagtacaa cctgaccgac
     2941 acggtcaaga ccgccgcgca ggcgctgaag gcagtcaccg
//
LOCUS       DASYRV010000322         6341 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2973902, whole genome shotgun sequence.
ACCESSION   DASYRV010000322 DASYRV010000000
VERSION     DASYRV010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6341
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2973902"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..316
                     /locus_tag="VGQ24_08415"
     CDS             <1..316
                     /locus_tag="VGQ24_08415"
                     /inference="COORDINATES: protein motif:HMM:NF014062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HEV8454900.1"
                     /translation="LGASIFITLAVIYAWLRHLPNSGRFSGLLLQGAVHKSQGFVSAP
                     NRGDLVGRDGVAVTDLRPSGTARVGEERLDVVTEGEYVPQGSRVQVVQSDGYRHVVRA
                     VL"
     gene            413..1414
                     /gene="floA"
                     /locus_tag="VGQ24_08420"
     CDS             413..1414
                     /gene="floA"
                     /locus_tag="VGQ24_08420"
                     /inference="COORDINATES: protein motif:HMM:NF010186.0"
                     /note="flotillin-like protein involved in membrane lipid
                     rafts; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin-like protein FloA"
                     /protein_id="HEV8454901.1"
                     /translation="MDQSTLSLGLVFALIFLAFILLIIFFRFIPVGLWITAWASGVPV
                     SFLTLFGMRFRKVNPSNIVNPLINASKAGLSLEINELEAHYLSGGNVQRVVSALISAD
                     KAGIPLSFKQATAIDLAGRDVFEAVQVSVNPKVITTPKVAAMAKDGIQLLALARVTVR
                     ANINRLVGGAGEETILARVGEGIVSTIGSASSHKAVLENPDLISKTVLAKGLDAGTAF
                     EILSIDIADVDVGKNIGAELQTDQAEADKRIAQAKAEERRALAVAMEQEFKAEAQNQR
                     AKVIAAEAQIPMAMAEAFRSGHLGVMDYQRYRNVQADTTMRQAIAGQSDANASGGSS"
     gene            1418..1993
                     /locus_tag="VGQ24_08425"
     CDS             1418..1993
                     /locus_tag="VGQ24_08425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454902.1"
                     /translation="MEFNGILVLAAVWFVVSLISRAGRKSQTPPPRANPRPPGPTLHP
                     VGRDPTQQEGTRLELMLREFQRALEDASGEGRPVETPGARYEQMEEGRSLEVESEARS
                     LEDVVSRPARREVDQDDEAEKIVARRIRAAAARDTAQSPVDHAAFDERIRQQPADHTA
                     VRTYTAQQLRDAMVWREILGPPVSLRDKSRV"
     gene            complement(2047..4038)
                     /locus_tag="VGQ24_08430"
     CDS             complement(2047..4038)
                     /locus_tag="VGQ24_08430"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEV8454903.1"
                     /translation="MPLLVLLAALLLPTSLVAQQIADSAARTDTLTRRPRELHEITVT
                     ATPVRRSEPATTNQVSAVDYLRVPAINPYEALRQTAGLEVHDQGQGPGFASDASVRGF
                     SSDHSTDLALWVDGVPVNEPVNGHAEGYNDWSLLFPAVIQDINVVTGPTSPFYGNFAL
                     AGAINVRTLERMRGTSGSLSGGSYARLDGSLLSGVDREGLGGVLGLRGLHDDGWRPHS
                     GYDLGQGHARLVHDLSGAATLDAGVELYAAGWDSPGFITVDQFDRQAYDTVANLTDGG
                     FKRRAQERVSLRVVTGSGMVWRSTVYATQGRWQLFLTIPPEGGAGEGTGSQTEEEDTR
                     YGFGATSAATWNLGPAVVTVGGESRWDHADYENWLTTDRSRDSAQDLVAARQASGALF
                     LQTTSDLGPRFRVAVGGRYDVLGTRSTPEGEGATGDTRGIFSPKVGVLYHVLPSADLY
                     GNVSRGFRQTDGVITDPALPLITAWAYETGIKINRPGVDASLAIFRTDVSNEQTFDPI
                     QLESTSGGQSRRQGIDADLHARLSSVIRVGARATITEAKYRHLITEEGDTLDGARVFN
                     TAKFVASGNVELAPETSPWHLGLATNLVGPYTPFDEPGVELPTYALFHLTGGVLVGAA
                     QIELGVRNLFDKSYPEVRAGGFVSPGQPRSMYGTVRYVF"
     gene            complement(4461..5015)
                     /locus_tag="VGQ24_08435"
     CDS             complement(4461..5015)
                     /locus_tag="VGQ24_08435"
                     /inference="COORDINATES: protein motif:HMM:NF012922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEV8454904.1"
                     /translation="MPVVQPRGFHPWHDLPTGPNPPVEVTAVIEIPTNERNKYELDKK
                     HGMFRLDRVLHSAVHYPGDYGFLPRTLGDDGDPLDVLVLMTIPVFTGCLVDARPIGLF
                     HLVDSGAADEKVLAVPLGDPYSEGLNDLGDIPQHYLKEIEHFFRVYKDLEGTHTETRG
                     FENAAAARAAIGVAMATYSAKFGT"
     gene            5103..5185
                     /locus_tag="VGQ24_08440"
     tRNA            5103..5185
                     /locus_tag="VGQ24_08440"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5136..5138,aa:Leu,seq:caa)
     gene            complement(5253..6266)
                     /locus_tag="VGQ24_08445"
     CDS             complement(5253..6266)
                     /locus_tag="VGQ24_08445"
                     /inference="COORDINATES: protein motif:HMM:TIGR02822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HEV8454905.1"
                     /translation="MTDTMDAVVLDRPGHPLRHARLPRPRPGTGEVLLRVQACGICRT
                     DLHVAAGELADPKLPLILGHEIVGTIVETGPEVERFSPGERVGVPWLGWTCGICRYCL
                     SGRENLCDRAQFTGYHRDGGYADHTVADARFCFPLPSSYEAVRAAPLLCAGLIGHRSL
                     RAVGEADRLGLYGFGAAAHLVAQIARFEGRQVFAFTREEDRQGQEFARELGAVWAGGS
                     AEPPPEPLDGAIIFAPVGDLVPVALRAVVKGGTVVCAGIHMSPIPAFPYEILWGERTL
                     RSVANLTRRDGEEFFRVATKLPLRVEVEVLPLAEANQGLERLRKGLVRGAEVLVPQTA
                     SRS"
BASE COUNT         1175 a         2037 c         2079 g         1050 t
ORIGIN      
        1 gctcggcgcg agcatcttca tcaccctggc cgtcatctac gcctggcttc gtcacctgcc
       61 caacagcggt cgcttcagcg ggctcctgct tcagggggcg gtgcacaagt cgcagggatt
      121 cgtgtcggcg ccaaaccggg gtgaccttgt gggacgtgac ggggtagcgg ttaccgatct
      181 ccgtccctcg ggcacggccc gggtaggtga ggagcggctc gacgtggtca cggagggcga
      241 gtacgtgccc cagggcagcc gagtccaggt ggtgcagagc gacgggtacc ggcacgtggt
      301 gcgggcagtt ttgtaggagt cacgagtcac gagtcacgag tcggtgggga tctctctttc
      361 gactcgcgac tggcgactcg cgactttttc tcttacttca aggacctcct tcgtggacca
      421 atccacactg agtctgggcc tggtattcgc gctcatcttc ctcgccttta tcctgctcat
      481 catttttttc cgcttcatcc cggtgggtct ctggatcacg gcgtgggcct ccggcgtgcc
      541 ggtgtcgttc ctcaccctct ttggcatgcg gttccggaaa gtcaatccgt ccaacatcgt
      601 gaacccgctc atcaatgcct cgaaggccgg cctgagcctc gagatcaacg agctggaggc
      661 gcactatctc tcgggcggca acgtccagcg agtggtgagt gcgctgatct cggccgacaa
      721 ggccggtatc ccgctcagct tcaaacaggc tactgccatc gacctggccg gccgcgacgt
      781 ctttgaggcg gtgcaggtca gcgtcaaccc gaaggtgatc acgaccccga aggtggccgc
      841 gatggccaag gatggcattc agctgctggc cctggcccgg gtcacggtgc gggccaacat
      901 caaccgtctg gttggcggcg ccggagagga gacgatcctg gcgcgagtcg gcgagggaat
      961 cgtgagcact atcggctcgg cctcttcgca caaggcggtg ttggagaacc cggatctgat
     1021 ttcgaagacc gtgctcgcaa aggggctcga cgctggaacc gcgttcgaga tcctgtccat
     1081 cgatatcgcg gacgtggacg tgggcaagaa catcggcgcc gagctgcaga ccgaccaggc
     1141 cgaggccgat aagcgcattg cccaggccaa ggcggaggaa cgccgtgcgc tcgccgtagc
     1201 catggagcag gagttcaagg ccgaagccca aaaccaacgg gcgaaggtga tcgcggccga
     1261 ggcccagatc ccgatggcga tggccgaggc attccgcagc ggccatctcg gcgtgatgga
     1321 ttaccagcga tatcgaaacg tccaggccga caccacgatg cgccaggcca tcgccggcca
     1381 gagtgacgcc aacgcaagcg gcggaagcag ctgacccatg gagttcaacg gcatcctcgt
     1441 gctcgcggcg gtctggttcg tggtcagcct gatcagccgg gccggcagga agagccagac
     1501 accaccgccg cgcgcgaatc cccggccacc gggcccaacc ctacatccag tcggcaggga
     1561 tccgacccag caggaaggaa cccggctcga gctcatgctg cgtgagttcc agcgcgcgct
     1621 ggaggatgcc agcggggagg gacgtccggt cgagacacca ggtgcccgct acgagcagat
     1681 ggaggagggc cgctcgctcg aggtcgagtc cgaggccagg agcctggaag atgtggtgtc
     1741 ccgtcccgcg cgccgtgagg tggaccagga tgatgaggcc gagaaaatcg tggcccggcg
     1801 gatcagagcc gccgcggcgc gcgatacggc tcagtctccg gtcgaccatg ctgccttcga
     1861 cgagcggatt cgtcagcagc ccgcggacca cactgcagtc cgcacctaca cggctcagca
     1921 gctccgggac gccatggtct ggcgggagat cctggggcct ccggtttcac tcagagataa
     1981 gtcaagggtc tagggtcgaa agtctaagag tcgccagacc ctagaccctg gacttccgac
     2041 cctctgtcaa aacacgtatc tcaccgtccc atacatcgat ctcggctgcc ccggtgacac
     2101 gaaaccaccg gcccgcacct cgggatacga cttgtcgaac agattgcgta caccgagctc
     2161 gatctgagcg gctccaacca gcacacctcc cgtcaggtgg aacaaggcat aggtggggag
     2221 ctcgacaccc ggctcatcga acggggtgta tggaccgact agattggtcg ccaaccccag
     2281 atgccagggg gacgtttccg gggccagctc gacgttgccg gacgccacaa acttggccgt
     2341 attgaatact ctggcgccat cgagggtatc accctcttcg gtgatgaggt ggcggtactt
     2401 ggcctcggtg atcgtggcgc gcgccccgac acgaatgacg gacgagagcc gggcgtgcag
     2461 gtcggcatcg atgccctgac ggcggctctg ccctccactg gtcgattcca actgtatcgg
     2521 atcgaaggtc tgctcgttgc tgacatcggt tcgaaagatg gcgagtgatg catccacgcc
     2581 agggcgattg atcttgatcc cggtctcgta cgcccatgcc gtgatcagtg gaagggcggg
     2641 gtcggtgatg accccgtccg tttggcggaa tccgcgggaa acattgccgt agaggtcggc
     2701 gctcggcagc acatgataga ggacgccgac cttgggcgag aagatccccc tggtatcccc
     2761 ggtagcgccc tcaccctcgg gcgtggagcg agttcccagc acatcatagc gtccgccgac
     2821 cgccacgcgg aagcgggggc cgagatcgct ggtggtctgg agaaagagcg ctcccgacgc
     2881 ctgtcgggcc gccaccagat cctgcgccga atcgcggctc ctgtcggtgg tcaaccagtt
     2941 ctcgtaatcc gcatgatccc agcggctctc gccgcccacc gtcacgacag cgggccccag
     3001 gttccaggtg gcggcgctgg tggcgccaaa gccgtaccga gtgtcctcct cctccgtctg
     3061 gctgcccgtg ccctcgcccg ctccgccctc agggggaatg gtgagaaaca gctgccaccg
     3121 gccctgggtg gcgtagaccg tgcttcgcca gaccatcccg gagccggtta ccacgcggag
     3181 actgacccgc tcctgcgccc gccgcttgaa cccaccatca gtgaggttgg cgaccgtgtc
     3241 atatgcctgg cggtcgaact gatccacggt gatgaagccg ggggaatccc agcccgccgc
     3301 atacagctcg acaccggcat cgagcgtcgc ggcgcccgag agatcatgca ccagacgagc
     3361 atggccctgg cccagatcgt agccgctgtg aggccgccaa ccgtcgtcgt gtagaccgcg
     3421 gagccccagg acgccgccca gcccctcacg gtccactcct gagagcaggc tgccatcgag
     3481 ccgggcgtag gatccgccgc tcagcgagcc gctggtgccc cgcatgcgct cgagcgtgcg
     3541 cacgttgatc gcgccggcca acgcgaagtt gccgtagaac gggctggtcg ggccggtcac
     3601 gacgttgatg tcctggatca ccgccgggaa caggaggctc cagtcgttgt acccctccgc
     3661 atgcccgttg acgggttcat taactggcac cccgtcgacc cagagcgcga gatcggtcga
     3721 gtgatcggag ctgaagcccc gcaccgatgc gtccgacgcg aagcccggtc cctggccctg
     3781 atcgtggact tcaaggccgg cggtctggcg gagcgcctcg taggggttga tcgcagggac
     3841 gcgcaagtag tccacggcac tcacctggtt ggtggtggcg ggctcgctcc ggcgaaccgg
     3901 cgtggccgtc acggtgattt cgtgcagctc gcgcgggcgg cgcgtcagcg tatcggttcg
     3961 ggcggcggaa tcagctatct gctgggcgac cagggaagtc ggcagcagca gcgccgcgag
     4021 tagaacgagt aggggcacac gacctcctcg agttgacgag tggagcgcgc ggatgtccgc
     4081 gcacggcatc ggtcagagga gatccggagg gggtccttgt gagggagggt gccgatgagg
     4141 cagaggctgg atggggcgat cgcgaggcga cggagtggtt ccggaactga aggagatcag
     4201 aaccggctgg gtgagcacct ccggtcgtac cagccccaga tgagagttgc aatgcagcgc
     4261 gcagagatca caacagttgg attgctgctg cgtcggaccc cggtgatcgg ttggtgcgcg
     4321 atgggaggtg tgatgcgatg gaccactgaa ggctcgcccc gctggagccg gcagcgacat
     4381 cgagatccca gtggcaagga atccgatcgc gataaacgcg gcaagcgcct gatgcgcggc
     4441 ctgacgaaac cggtggaggc tcacgtcccg aacttagcac tgtacgtcgc catggcaacg
     4501 ccaatggcgg ctcgggctgc agcggcattc tcgaacccac gagtctcggt gtgggtgcct
     4561 tcgagatcct tgtagacccg aaaaaagtgc tcgatctcct tgagatagtg ctgcggaatg
     4621 tcccccagat cgttcagccc ctcggagtac ggatcaccca gggggacagc cagcaccttc
     4681 tcgtcggccg ctcccgaatc gaccagatga aacagcccga tggggcgggc gtccaccagg
     4741 cagccggtga acaccggtat ggtcatgagt accagcacgt cgagcggatc tccgtcgtca
     4801 cccagcgtcc ggggcaggaa gccgtagtcg ccggggtaat gcacggcgct gtgcagcacc
     4861 cgatccagcc ggaacatgcc gtgcttcttg tcgagctcgt acttgttgcg ctcgttggtg
     4921 gggatctcga tgactgcagt cacttcgacc ggcggattgg gaccggtggg aaggtcgtgc
     4981 cagggatgga aaccacgcgg ttgaacgacg ggcacgagag cctggtcggc tgagagagcg
     5041 ggaatgtacc gactccaggc gcggcttgca tccccacctg ctcctgacga acttttacct
     5101 cggcccgagt ggcggaatgg cagacgcagc ggactcaaaa tccgccgagg gcaacctcgt
     5161 gcgagttcga ctctcgcctc gggcactttg tagcgccacc acttttccat cgcatgggag
     5221 aaaggccgcc cccacgaagg tccctgttcc gcctacgacc tggaagccgt ctgcggcacc
     5281 aggacctcag ccccgcgcac cagtcccttt cgcagccgtt cgaggccctg gtttgcttct
     5341 gccagaggaa ggacttcgac ttcgacccgg agaggtaact tcgtggcgac gcggaaaaac
     5401 tcttcgccat cccgacgagt gaggttggcg accgagcgga gagtgcgttc tccccagagt
     5461 atctcataag gaaacgccgg gatcgggctc atgtggatcc cggcgcatac taccgtacct
     5521 ccctttacca ctgcgcgcag cgccaccggc accaggtctc cgactggagc gaagatgatc
     5581 gcgccatcga gcggctccgg tggaggctcg gccgagcctc cggcccatac cgcacccagc
     5641 tcgcgggcga actcctggcc ctggcgatct tcttcacggg tgaaggcgaa gacctgccgg
     5701 ccctcgaacc gggcgatctg agcgacaaga tgcgcggccg cgccaaagcc atagaggccg
     5761 agccggtcgg cctcacccac agctcgcagc gatcgatggc cgatgaggcc ggcgcaaagc
     5821 aggggcgcgg ctcgcacagc ctcatagctg ctggggagag gaaaacagaa tcgtgcgtcg
     5881 gccacggtat ggtcggcata gccgccgtcg cggtggtacc cagtgaactg cgcccgatca
     5941 cagaggttct cccgcccgct cagacagtag cggcagatcc cgcaagtcca acccagccaa
     6001 ggcaccccca cccgctcacc aggactgaag cgctctacct ctggcccagt ctccacgatc
     6061 gtgccgacga tttcgtggcc caggatgagc ggaagcttgg ggtcagcaag ctcgccggcg
     6121 gcaacatgca gatcggttcg gcaaatgccg cacgcctgta cccggaggag cacctcccca
     6181 gtccctggcc tcggccgcgg caggcgagca tgtcgtagcg gatgacccgg ccggtcgagg
     6241 accaccgcgt ccatggtatc ggtcatttca acccagcgaa gtaagagacc cctggcgcac
     6301 tccgacgaac ctaaagtgaa cccggggccg aaggtattct c
//
LOCUS       DASYRV010000323         2123 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_963487, whole genome shotgun sequence.
ACCESSION   DASYRV010000323 DASYRV010000000
VERSION     DASYRV010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2123
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_963487"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..393
                     /locus_tag="VGQ24_08450"
     CDS             <1..393
                     /locus_tag="VGQ24_08450"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEV8454906.1"
                     /translation="VLIFSGVLDRFPDLQIVSAENNCGWVPYYLQRMDRIFERGRYAA
                     GFKFSLKPSEFFQRQMHCTYIDDFVGVANRHFIGVDKLMWSSDYPHQASSWPNSQEVV
                     ARDFKDASPEERFKITRGNVAKLYGFEL"
     gene            601..1011
                     /locus_tag="VGQ24_08455"
     CDS             601..1011
                     /locus_tag="VGQ24_08455"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8454907.1"
                     /translation="MVIAGQLAGVHVLVVEDDPDSGEVISSCLGGWGGAAVSGASSAE
                     EALALFDRVRPDVLVADLSMPYHDGFWLIGQIRNRRPESGGLVPAIALTAHGFMYPRG
                     RVLAAGYDERLRKPFDPQELCGMVAMLARSARAA"
     gene            1937..>2123
                     /locus_tag="VGQ24_08460"
     CDS             1937..>2123
                     /locus_tag="VGQ24_08460"
                     /inference="COORDINATES: protein motif:HMM:NF018712.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1326 domain-containing protein"
                     /protein_id="HEV8454908.1"
                     /translation="MATAATTRWYLKGRGYEFCNCYFGCGCNFGGFPNSKDGSCRALV
                     GLAITEGKCGDIDLSGVK"
BASE COUNT          353 a          702 c          684 g          384 t
ORIGIN      
        1 gtgctcatct tctcaggagt gctcgatcgt tttccggatc tccagatcgt ctcggccgag
       61 aacaactgcg gctgggtccc ttattacctg cagcgcatgg atcgcatctt cgagcgcgga
      121 cgctacgccg cgggcttcaa gttctccctg aaacccagcg agttcttcca gcgccagatg
      181 cactgcactt acatcgacga cttcgtcggc gtggccaacc gccacttcat cggcgtggac
      241 aagctcatgt ggtcctccga ctacccacac caggcctcct cgtggccgaa ctcccaggag
      301 gtggtggcca gggacttcaa ggacgccagt ccggaagagc gcttcaagat cacacgcggc
      361 aacgtggcca agctctacgg gttcgagttg tagggattct acgaacatgg ggggccgcga
      421 agggcccccc aatcccccca cgctcggagg cgccccggcg aagccgggac gcgctcgact
      481 accgccgcaa ttcccacgcg cggaggcgcc cccgcgatgc cgggacgccc ctcgatactc
      541 cgacacgctc ccggtcttct tgcacggttg ccggcgtggt gcttgcacac gtgcacccac
      601 atggtgattg ctggccaact cgcgggcgtg catgtcctcg tcgtcgagga cgatccggac
      661 tcgggtgagg tgatttcctc ctgcttgggc gggtggggtg gcgcggcggt gtccggtgcg
      721 tcctcggccg aggaagcgct cgccctgttc gaccgggtca ggcccgacgt gctggttgcc
      781 gacctgtcca tgccctacca cgacgggttc tggctcatcg ggcagatcag aaatcgtcgg
      841 cccgagtccg gaggtctcgt gccggccatc gccctgacag cgcacggctt catgtaccca
      901 cgcggtcgtg tgctggctgc gggctacgat gaacggttgc gaaagccctt cgatcctcag
      961 gagctctgcg ggatggtggc gatgctcgct cgctcagcgc gggccgcttg agctgtcttc
     1021 ttgtcgtcgc atcaccgcgg cgctcctgcc ggctgagccg acgtcgctgg cggggcggac
     1081 ctccctagcc ctcgcaggcg ccaaagctcg atagcggact ctgagccgtg cccggcgagt
     1141 ctcccgagca gtcgtccggt actttcgtcc agcctaagcg tgatagcgcg cccctccgtc
     1201 aggtcgaatc tcacgtgatc ggcagtgaga gacccgaacc gccgcagcgt tggggccatg
     1261 gccgcttcgc caatagtgaa atatcccacg atggtcgatg gacgcgggct ctccgtgaag
     1321 atgacttcga ggggcgaccg agcagtcgct cccgtggtca ctcggttccc gagccacgcg
     1381 cctagcagga cggcgggggt gagtggttgg tgggccacca gcgccgctgg ggacccctgg
     1441 tcggttgcgg gcggagccgg ctgccccccg agggccagca ggaacgcgag tatcacctgc
     1501 ttcatagacc tcctcagtgg tcacagtggt cgccccgatg gtgatgcggt ttcagcaaag
     1561 gtcaggccaa cagaagattc cgggcagttc ctgggtgtta tccgcgatag ccggaccgga
     1621 agcgcccgtc gtgctactcc aatgctgaaa tttcttactg taagatctgc agcgtgacac
     1681 acatgaacga gaaagctccg gcaacgaaca aggggccctg atcgtcgacg acgtcgaggg
     1741 caaccggcgg ggtcaggcca ccgatggaat cgcgacaggc cgcggcggtt tgcccatgcc
     1801 gtcggcgacc atccacaacg aggcgcgcac cctcccacgg ccagccggcc cgcgccacgc
     1861 gcccgcgcca cgcgcccttg acaccttgtg ggccgtctcc tagattcgac gccatctcat
     1921 cgcggtggag gttgacatgg cgacggccgc cacgacgcgc tggtatctca agggacgcgg
     1981 ctacgagttc tgcaactgct acttcgggtg cggctgcaac ttcgggggat ttcccaactc
     2041 gaaagacggt agctgccggg cgctcgtcgg tctcgcgatc accgagggga agtgcggaga
     2101 tatcgatctc tccggcgtga agt
//
LOCUS       DASYRV010000324         2751 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2974139, whole genome shotgun sequence.
ACCESSION   DASYRV010000324 DASYRV010000000
VERSION     DASYRV010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2751
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2974139"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2324)
                     /locus_tag="VGQ24_08465"
     CDS             complement(<1..2324)
                     /locus_tag="VGQ24_08465"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEV8454909.1"
                     /translation="MTRATRFRSVVLTAVLVASARLGSAQTAQVSGFVRDASEALVSG
                     AEVTVTQTDTGVDRKAVSNVGGYYLVPFLPPGRYKVAVRAQGFKPVDREGITLAVDQA
                     ARVDFVLELGQLTDAVEVTADAPLLETESSSLGQVVSRRAIVDLPLNGRNYLQLAKLA
                     AGVVEPPAGDRAITGGSFVANGVRATLNNFILDGVDNNSRIVDIQNSSNVVIQPSVDA
                     LSEFSVQTHNFSAEFGYSAGAVVNAVIKSGDNTFHGSAFEFARNDALDARNYFSNPAE
                     KKPELKRNQFGGTVGGPIVRNKTFFFASWERTRETRGLTFLTTVPTAAMRGGDFSGER
                     TLFDPATTRTNPAGAGSIRDPFPGNRIPAVRIDPAAAKVLALIPLPNIAGAGAVNNYS
                     TNKDREDHRDQVDVRLDHSFSARSKLFARFSFGDFTSSNPGPFDPPLIGSSQFQQSRK
                     DQSAQQLAAGHTFVFSAATVNEVRFGYNRIRDNLLPFVGERIVDQFGIQGIPSAPGVT
                     GLPQITVAGFAPLGEATFLPNNKLSRTYQVNDNLSLLKGRHSIKLGVNYRYIQSTFDV
                     SGAARGSFTFNGAFTQSPQSRTTTGSPFADFLLGTAQSATVSNTFTGDLRNHYLGAYV
                     QDAWRLGRKLTVNLGVRYEIFTQPYEVDDKQANFLVDQRKLMFPENAVPSGMPASLVT
                     TIPSGVPSRSLIKTDFNNVAPRIGIAYQLGKSTALRAGIGIFYADHPSNGASTRLVGN
                     PPFRVNAVYATDSVTPRIILGTGFPPSALDTVQF"
     gene            2550..>2751
                     /locus_tag="VGQ24_08470"
     CDS             2550..>2751
                     /locus_tag="VGQ24_08470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEV8454910.1"
                     /translation="MRSLKKEVCCTVGLILLLRPSAGAQSVTARLTGTVKDSTGFALP
                     GATVVVQSVNSGRTWQTLTQRTG"
BASE COUNT          464 a          844 c          949 g          494 t
ORIGIN      
        1 ttgaattgaa ccgtgtccag cgcgctcggg gggaatccgg tgcccaggat gatccgcggc
       61 gtcaccgagt cggtcgcata gaccgcgttc acgcggaagg ggggattgcc caccaggcgc
      121 gtcgaagcgc cgttcgacgg gtgatccgca tagaagatgc cgatccccgc gcgcagggcg
      181 gtggactttc cgagttgata ggcgatgccg atgcgcggcg cgacgttgtt gaagtcggtc
      241 ttgatcaagg accgcgaagg gaccccggac gggatggtgg tgaccaggct cgcgggcatg
      301 cctgacggca ccgcgttttc agggaacatc agcttgcgct ggtcgaccag gaagttcgcc
      361 tgtttgtcgt cgacttcgta aggctgggtg aagatctcgt agcggacgcc gagattgacg
      421 gtcagcttcc gccccagcct ccaggcatcc tggacgtaag ccccgaggta atggttccgg
      481 aggtcgcccg tgaaggtatt gctcacggtg gccgattggg ccgtacccag caagaaatcc
      541 gcgaagggcg agccggtggt cgtccggctc tgcgggctct gcgtgaaggc gccgttgaac
      601 gtgaacgagc cgcgggcggc gccggagacg tcgaaggtgc tctggatgta gcggtagttc
      661 actcccagct tgatcgagtg ccggcccttc aggagcgaaa ggttgtcgtt cacctgatac
      721 gtccgggaga gcttgttgtt gggcaggaag gtcgcttcac cgagaggggc gaagcccgca
      781 acggtgatct gcggcagacc cgtgacgccg ggcgcgctcg ggatgccctg gatcccgaac
      841 tggtccacga tccgctcgcc gacgaacggc agcaggttgt ctcgaatgcg gttgtagccg
      901 aagcggacct cgttgaccgt ggcggcggag aagacgaagg tgtgccccgc ggccaactgc
      961 tgcgccgatt gatccttgcg ggactgctgg aactggctgc ttccgatcag gggcggatcg
     1021 aaggggccgg ggttgctgga ggtgaaatcg ccgaagctga accgggcgaa gagcttgctc
     1081 ctggcggaga agctgtggtc cagccggacg tcgacctggt cccggtgatc ctcacgatcc
     1141 ttgttcgtgg agtagttgtt gaccgcgccc gcgccggcga tgttcggcag cggtatcagc
     1201 gcgagaacct tggccgccgc gggatcgatg cgcacggccg ggatccggtt gccggggaac
     1261 ggatcgcgga tggagcccgc gcccgccggg ttggtccggg tcgtggccgg atcgaagagg
     1321 gtgcgctctc ccgagaaatc gccgccgcgc atcgccgcag tcggcaccgt ggtgaggaag
     1381 gtcaagccgc gggtctctcg cgtccgctcc cagctcgcaa agaagaaggt cttgttccgc
     1441 acgatgggcc cgcctacggt cccaccgaac tggttccgct tcagctccgg cttcttctcc
     1501 gccgggttcg agaagtagtt gcgggcgtcg agggcgtcgt tgcgggcgaa ctcgaacgcg
     1561 ctgccatgga aggtgttgtc ccccgacttg atgacggcgt tgaccaccgc ccccgcggag
     1621 tagccgaact cggcggagaa gttgtgcgtc tgcacgctga actcggacag cgcgtccacg
     1681 gacggttgga tgacgacgtt cgagctgttc tggatgtcca cgatgcgcga gttgttgtcg
     1741 actccgtcca ggatgaagtt gttcagggtg gcccgcacgc cgttcgccac gaaagatcca
     1801 cctgtgatgg cgcggtcgcc ggcgggaggc tccaccactc cggcggcgag cttggcgagc
     1861 tggaggtagt tgcggccgtt caagggcaga tccacgatgg cgcggcgcga gaccacctgg
     1921 cccagcgaag agctctcggt ttccagtagc ggcgcgtcgg ccgtcacctc gacggcgtcg
     1981 gtgagctggc ccagctcgag cacaaaatcg acgcgggcgg cctggtccac ggcgagcgtg
     2041 atgccctcac ggtccaccgg cttgaaccct tgagcgcgca ccgccacctt gtacctcccg
     2101 ggcggcagga acgggaccag gtaatacccg cccacgttcg acacggcctt gcggtcgacg
     2161 ccggtgtccg tctgcgtgac cgtgacctcg gccccggaca cgagcgcctc gctggcatca
     2221 cggacgaagc cgctcacctg ggccgtctgg gcgctgccga gccgcgcgga cgccaccagc
     2281 acggccgtca ggaccaccga ccggaaacgt gtcgctcgcg tcatcatctc tccattccca
     2341 gtggccgaaa ctcaatgcaa ggcccgcatt gttgcgattg ctttcgtatt agtctgctgt
     2401 gcttgcttat gatatcgaga actgccctgt cgtggtcatg agagttgccg gcgcgaggtc
     2461 acgacaagca gaagacgcga gaggaccagg tacctctctg gcaccagctc tacggcggta
     2521 ttgatgtccc aattccttgt ggaggatcca tgcgatctct gaagaaagag gtctgctgca
     2581 ccgttggact gattcttctc ctgcggcctt cagccggggc gcagtccgtg accgcgcgac
     2641 tcaccggaac cgtcaaagac tcgacgggat tcgccttgcc cggtgccacc gttgtcgtcc
     2701 agagcgtgaa ctccggacgg acgtggcaga ccctcaccca gcggaccggc g
//
LOCUS       DASYRV010000325         4341 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_4070137, whole genome shotgun sequence.
ACCESSION   DASYRV010000325 DASYRV010000000
VERSION     DASYRV010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4341
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4070137"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..679)
                     /locus_tag="VGQ24_08475"
     CDS             complement(<1..679)
                     /locus_tag="VGQ24_08475"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682205.1"
                     /note="Produces ATP from ADP in the presence of a proton
                     gradient across the membrane. The beta chain is a
                     regulatory subunit; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEV8454911.1"
                     /translation="MATAIATERADKSTQAKHNTGLVVQVIGPVLDVEFEPEHLPEIY
                     NALEIEDASGPVPVRLTAEVQQHIGQNQVRAVAMSTTDGVTRGMQVRDTGGPITAPVG
                     EAPLGRILNVLGEPVDGGPPLPKDTERWPIHRATPKFTDLEPKTEIFETGIKVIDLIA
                     PFVKGGKIGLFGGAGVGKTVVIQELINNVAKGHGGRSVFCGVGERTREGNDLYLEFKE
                     AKILENVA"
     gene            complement(727..1659)
                     /gene="atpG"
                     /locus_tag="VGQ24_08480"
     CDS             complement(727..1659)
                     /gene="atpG"
                     /locus_tag="VGQ24_08480"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit gamma"
                     /protein_id="HEV8454912.1"
                     /translation="MAKGRELKGRIRSVQNTRKITKTMELVATSKLKRAQDRVVAARP
                     YAEALRQVIADLFTPDLAHQFPLLRRPAPLSKGGPRRAAVILLTSNRGLAGGFNSNLI
                     KEARRRVESLESEGYEVDLYGVGKKGIGFFKYLGRRMTMERTDIGDRPTSEHAGELVQ
                     PLIEAYETGELASVDLVYARFVSALQTPPTTVRILPVETAGQRGGSPLGGWAAGQDRD
                     QGQRMTANYILAPSAEAILEQLLPLYVRNAVYRGLVETAAAEHGARRTAMKNATDNAG
                     EILELLKRTYNRQRQAQITQEIAEIVGGSAALQE"
     gene            complement(1659..3236)
                     /gene="atpA"
                     /locus_tag="VGQ24_08485"
     CDS             complement(1659..3236)
                     /gene="atpA"
                     /locus_tag="VGQ24_08485"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEV8454913.1"
                     /translation="MATESILRPGELKDILLREIASADLGTEDVSEVGTVLEVRDGVA
                     RIYGLKTAMASEMLEFTAQETGETVAGLVLNLEEDNVGAAVMGDYLKLKEGDEVRRTG
                     HLLDVPVGPAMLGRVVDALGRPVDGRGPIHATTSRQVEMVAPGIIVRQPVKEPLQTGI
                     KAIDAMIPIGRGQRELIIGDRGTGKTAIAVDTIINQRGTGVVCVYVAIGQKRSTVATV
                     VERLKEAGAMEFSIVVVASASEPAPLQFIAPYAGCAIAEYFMYEEGKATLCVYDDLSK
                     QAAAYRQLSLILRRPPGREAYPGDVFYLHSRLLERAAKISEDAEAVRLDSRIKKPGGS
                     LTALPIVETQAGDVSAYIPTNVISITDGQIFLTTDLFYSNVRPAVDAGISVSRVGGNA
                     QIKAMKQVAGPLRLSLAQYRELEAFAQFGSDLDPATQRQLARGARLVEVLKQPQYRPM
                     PVEKQVVVIYAVTNGFLDDMAVPQIRKWEHDFLDYLDAAHPKILSDIRTKKTLDDDLT
                     NRLKAAITAFAPMFVPA"
     gene            complement(3341..4108)
                     /locus_tag="VGQ24_08490"
     CDS             complement(3341..4108)
                     /locus_tag="VGQ24_08490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454914.1"
                     /translation="MPAIAALLESRAAVIALRRTLPKGGPSVVTCKSAAALHRLLETR
                     LIDAVVLAPQPGLLPELARLQSRLPFIPLVAYAPFRPDDGELLLACREAVSAVAVEGV
                     DDPIVGDLVVRASITAERRRALAEAPRMLRLTEPLQRSAWNVLVGEVERPIRTTALAR
                     RLRISREHLSRQFGAGGAPNLKRVIDLTRVACAAQLLGNPGFSVPTVVRVLHFASPSH
                     LANTARRIANVSSSGLGALGARGVLAAFVRGNTRSRV"
     gene            complement(4112..>4341)
                     /locus_tag="VGQ24_08495"
     CDS             complement(4112..>4341)
                     /locus_tag="VGQ24_08495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454915.1"
                     /translation="DNARGVLKRAGEMVRTLVAIGAGREGARADRRTGRQADGRRDQQ
                     AYVETVESSTAVEAVEREAERTTRPPVRPSA"
BASE COUNT          694 a         1485 c         1378 g          784 t
ORIGIN      
        1 gggcaacgtt ctccaggatc tttgcttcct tgaactccag gtacaggtcg ttgccttcac
       61 gggtacgctc acccacgccg cagaagaccg acctgccgcc gtggcccttc gccacgttgt
      121 tgatcagctc ctgaatgacg accgtcttcc ccacgccggc gccgccgaac agaccgatct
      181 tcccgccctt cacgaacggg gcgatcagat cgatgacctt gatgcccgtc tcgaagatct
      241 cggtcttagg ctccaggtcg gtgaacttcg gtgtggcgcg gtggatgggc caacgctcgg
      301 tgtccttcgg cagcggcggg ccgccgtcca ccggctctcc caggacattg aggatacgcc
      361 ctagtggagc ctcgccgacg ggtgcggtga tcggtccccc ggtgtcccgc acctgcatgc
      421 cccgggtgac cccgtcagtg gtgctcatgg ccaccgcccg gacctgattc tgcccgatat
      481 gctgctgcac ttccgcggtc agccggaccg gaaccggccc gctggcatcc tcgatctcga
      541 gtgcgttata gatctcgggc aggtgctccg gctcgaactc gacatcgagc accgggccga
      601 tgacctgcac caccaggccg gtattgtgtt tggcctgggt ggacttgtcg gctcgctcgg
      661 ttgcgattgc tgttgccatg tgtgcctgcg ctccgtctgt gttttcagat tggttagctg
      721 acgccactac tcctgaagcg ccgccgagcc acccacgatc tcggcgatct cctgagtgat
      781 ttgggcttgc cgctggcgat tgtaggttcg cttgagcagc tcgagaatct caccagcgtt
      841 gtcggtggcg ttcttcattg cggtgcgccg ggcgccatgt tccgccgccg ccgtctcgac
      901 caacccccga tacaccgcgt tgcgcacata gagtggaagc agttgttcca gaatcgcctc
      961 ggcgctcggg gccagaatat agttggctgt cattctctga ccctggtctc tgtcctgccc
     1021 cgctgcccat ccgcccaggg ggctcccgcc ccgctgtcct gccgtctcca ccggaaggat
     1081 tcggaccgtg gtcggcgggg tctggagtgc gctgacgaag cgggcataga ccaggtccac
     1141 actggcgagc tccccggttt cgtacgcctc gatcaggggc tggaccagtt caccagcgtg
     1201 ctcgctggtg ggccggtccc cgatatcggt gcgctccatt gtcatcctgc ggcccagata
     1261 tttgaagaag ccgatcccct tcttgcccac gccatagaga tcgacttcat agccctcgga
     1321 ttcgagtgac tccacccgcc gccgcgcttc cttgatcaga ttcgagttga agccgccggc
     1381 cagcccgcgg ttggacgtca ggagaatcac cgccgcgcgc cgagggccgc ccttggatag
     1441 cggcgcgggc cggcgaagca gggggaactg atgggccaga tcgggggtaa agaggtcggc
     1501 gatcacctga cgcagcgctt cggcgtacgg gcgggccgcc accacccggt cctgcgcacg
     1561 cttcagcttc gacgtggcca ccagctccat cgtcttggtg atctttcggg tattctggac
     1621 ggaacggatc cgtcctttga gctctcggcc cttggccatt aggcgggcac gaacatcggc
     1681 gcaaacgccg tgatggcggc cttgagccgg ttggtgagat cgtcgtccag agtcttcttg
     1741 gtccggatgt cactcaggat cttcgggtgc gcggcgtcga ggtaatcgag gaaatcgtgt
     1801 tcccacttcc ggatctgcgg gaccgccatg tcgtccagga agccgtttgt caccgcgtag
     1861 atgacgacca cctgcttctc gaccggcatc ggccggtact gcggctgctt gagcacttcg
     1921 accagccgcg ctccgcgggc cagctgccgc tgggtggcgg gatcgaggtc cgaaccgaac
     1981 tgggcaaagg cctcgagctc acgatactgg gccaggctca gccggagcgg gccggccacc
     2041 tgcttcatcg ccttgatctg cgcgttgccg cccactcggc tcacgctgat ccccgcatcc
     2101 acggcgggcc ggacgttgga gtagaacaga tccgtggtca ggaagatctg tccgtccgtg
     2161 atggagatga cgttggtcgg aatgtaggcc gacacgtccc ccgcctgcgt ctcgacgatc
     2221 gggagcgcgg tcagcgagcc gcccggcttc ttgatgcggg agtccagcct gaccgcttcg
     2281 gcgtcctccg agatcttggc cgcgcgctcg agcaggcggc tatggaggta gaagacgtcg
     2341 ccggggtagg cctcacgccc gggcgggcgg cgaaggatga gcgacagctg gcggtacgcg
     2401 gcggcctgct tggagaggtc gtcgtagaca cagagcgtcg ccttgccctc ctcatacatg
     2461 aagtattcgg cgatggcaca gccggcgtac ggcgcgataa actgcagcgg cgccggctcc
     2521 gacgcggacg cgaccacgac gatactgaac tccatcgcgc ctgcctcctt cagtcgctcc
     2581 accacagtgg ccaccgtcga gcgcttctgc ccgatcgcca cgtagacgca aacgacaccg
     2641 gttcccctct ggttgatgat cgtatccacc gcaatggcgg tcttgccggt gccgcggtcg
     2701 ccgatgatca gctcgcgctg tccccggccg atcggaatca tggcatcaat ggccttgatg
     2761 ccggtctgca gcggctcctt caccggctgc cgcacgatga tgcccggcgc caccatctcc
     2821 acttgccgcg aggtcgtggc atggatcggg cctcgcccgt cgaccggccg gcccagcgca
     2881 tccaccaccc ggcccagcat ggccggtccc accggcacgt cgagcagatg gcccgtccgg
     2941 cggacctcgt caccttcctt gagcttcaag tagtcgccca tgacggcggc gccgacgttg
     3001 tcttcttcca ggttgagcac cagcccggca accgtctccc cggtctcctg agcggtgaac
     3061 tccagcatct cgctcgccat ggcggtcttg aggccgtaga tgcgggcgac gccatcccgc
     3121 acctcgagca ccgtgccgac ttcgctcacg tcctccgtgc cgagatcggc ggaggcgatc
     3181 tcgcgcagca ggatgtcttt cagctcgccg ggacgaagaa tggattcagt ggccatgtag
     3241 gtcggactca ccttgaaggg acgatccaat ttagcttgtg aaaataatca caatgccgag
     3301 cgcggcaagc aggcgggcgg acagccggac aggcgaacgc ctacacccgg ctacgagtat
     3361 tcccccgtac gaacgccgcc aacacgccac gtgcgcccaa cgcgcccagc ccgctgctcg
     3421 aaacgttggc gatccggcgc gccgtgttgg cgaggtgact gggcgaggca aaatggagca
     3481 cgcggaccac ggtaggcacc gagaagcctg ggttgcccag caactgggcc gcgcaggcga
     3541 cccgggtgag atcgatcacc cgtttcaggt tgggagctcc ccccgcaccg aattggcggg
     3601 aaaggtgttc ccggctgatc cggagtcgcc ttgccagggc ggtggtccgg atcggccgct
     3661 cgacttcacc caccaagaca ttccacgcgg accgctggag cggctcagtg agccggagca
     3721 tgcgaggagc ctcggccaga gcccgccgcc gttccgcggt gattgaggcg cgcaccacca
     3781 gatcgcccac gataggatca tccaccccct cgaccgccac cgccgagacg gcctcacggc
     3841 aggccagcaa cagctcaccg tcatcgggac ggaatggcgc gtacgcaacc aggggaatga
     3901 acggcagccg agattgcagc cgggccagct ccggaaggag accaggctgg ggcgcgagga
     3961 ccaccgcgtc gatcagccgg gtctcgagca accggtgcaa ggcggcggcg ctcttacagg
     4021 tgaccacgct cggtccgccc ttggggagcg tgcgccggag agcgatgacc gcggcgcggc
     4081 tttcgagcag ggcggcgatg gcgggcatgg ctcaggcgga cgggcggacc ggcggacggg
     4141 tagtccgctc cgcctcccgc tctactgctt caacagccgt gctcgactca acggtctcaa
     4201 cgtacgcttg ttgatccctt cgcccgtccg cctgtctgcc cgtccgcctg tccgctcgtg
     4261 cgccctccct ccctgccccg atcgccacca gggtgcgcac catctcgcca gcccgcttca
     4321 acacgcctcg ggcgttgtcg t
//
LOCUS       DASYRV010000326         8616 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_128933, whole genome shotgun sequence.
ACCESSION   DASYRV010000326 DASYRV010000000
VERSION     DASYRV010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8616
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128933"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..524
                     /locus_tag="VGQ24_08500"
     CDS             <1..524
                     /locus_tag="VGQ24_08500"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HEV8454916.1"
                     /translation="FRPEPVSRETIEQLLECAVRAPNHKLTQPWRFTILTGAARDRLA
                     DLRAGHRLKRFGDPSAPEALAAADKVRHETRDVPVFVVVMSAVNPDEVTREEDYAATM
                     MAVANLMVAAESLGLGTYLKTGGVMRDPAVLELARVPQGFRIVGIISLGYPAEVEPPR
                     RRKPATELTSWVG"
     gene            complement(455..1282)
                     /locus_tag="VGQ24_08505"
     CDS             complement(455..1282)
                     /locus_tag="VGQ24_08505"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEV8454917.1"
                     /translation="MPQMAEVRIGTSGYVYPHWRKGVFYPPGLTAKQELAYYAARFRT
                     VELNNPFYRLPTPEMFLRWRESTPTDFDFAIKASRYITHIKRLHNAADEIALLMERAA
                     MLGPKLGPVLFQLPPTQQIDTARLRDFLALLTPNQRWVVEFRHPSWHTSETYRLLAEG
                     GVALCIPVGGGLEPDRITTAPFTYIRMHRGQEPTGGFAREELKSWAAQVRALAASGKE
                     VYIYFNNDWKGFALRDAVTFERLLGVEGSSRPADVQPTHEVSSVAGFRRRGGSTSAG"
     gene            1481..1693
                     /locus_tag="VGQ24_08510"
     CDS             1481..1693
                     /locus_tag="VGQ24_08510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454918.1"
                     /translation="MKVLTGLALLIGLAACGPRGDRETGRVGADTSLMTRQTQDTAIV
                     TSDTTVNVDTTKKEGDKAVTKDSVKK"
     gene            1806..2498
                     /locus_tag="VGQ24_08515"
     CDS             1806..2498
                     /locus_tag="VGQ24_08515"
                     /inference="COORDINATES: protein motif:HMM:NF012616.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA adenine N-6-methyltransferase family
                     protein"
                     /protein_id="HEV8454919.1"
                     /translation="MPAQSTSRSGQLLLFSRNFIKHPRMLGSLIPSSRFLVNHVLAEV
                     DWSRARVFLEYGPGVGTFTAEILRRMRPDAVLVALETNTDFVRFLRRRFKDDRLHIIH
                     GSAADADAALARLRLCHADYVLSGIPYTTMPPELRETILRKTHSVLHPDGAFLVYQFT
                     RSVLPYLQEVFRLVHQDFEPLNVMPARLFYCRHQVENGNGQRSNGSAQSPSRQPAVPE
                     PIGHARPARSSG"
     gene            2658..3548
                     /locus_tag="VGQ24_08520"
     CDS             2658..3548
                     /locus_tag="VGQ24_08520"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HEV8454920.1"
                     /translation="MSRFIGAHTVANGGIHMAALRAGNAGMTALQIFTAPPQYYGDKA
                     SVKPERVQRFRAALDQAGIRPEQVVVHGAYVLNTATDDETKWSRAQAGLRKELERSTA
                     LGVGSVCFHPGAATSGDREASTERVARAITDALEAVPGQTRLLVENTAGAGQTVGRTP
                     AEIGAILHAIPPHLRQRTGYGLDTCHLFASGLDITVSEAALRRVLDDFERAADAPPSF
                     FHLNDSEGALGSNKDRHLLIGEGRIGREAFRWLLGDTRATAIPLILETPQEHCDIADD
                     DPSPDPYDLAMMKLLSSMMI"
     gene            3788..4501
                     /locus_tag="VGQ24_08525"
     CDS             3788..4501
                     /locus_tag="VGQ24_08525"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEV8454921.1"
                     /translation="MQTTPSSSQSVQHTPSRGFLTFLAAAGFVGAMLLTPSLELDPPV
                     QRLASRQPSVEPTTIPPADSTTLEGQVVARYDHLPLAQILRRTAEPEIANRVARAIVK
                     EARQLQLPPRLLAGVLLTENARLEPETISSRGAVGLMQVMRFHAGVFDCDSDDLLQVE
                     ANICHGARVFAGYLKRTNDVRSALLRYNGCVRSRVTQNCRRYPSKVLRQAERIRHQLL
                     LYLPRNRSTAVTSGSAPTS"
     gene            complement(4513..6615)
                     /locus_tag="VGQ24_08530"
     CDS             complement(4513..6615)
                     /locus_tag="VGQ24_08530"
                     /inference="COORDINATES: protein motif:HMM:TIGR02074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HEV8454922.1"
                     /translation="MTGWKRGLEWLTGGQPRWRRPVLLALVLGAAFLLGLTLWVSTCG
                     FYGCPSTSQIQAFRPSEGSQVLDHRGTRIGRLSYVRRINVPLARVPRHVRAAFIATED
                     RRFYYHGGVDWRSAGRAALRNLSTLGFREGFSTITMQVVRNAFLPHLSGERSLRRKLI
                     ELELARRLEANLTKQQILETYLNVIYLGNGTYGIEAASRDLFGKSVGRLSLAEAATLA
                     GLAKGPSVYAPRRHPERAIARRNLVLSLMVREGYATSEGASRAQSERLRLAPAEWRPP
                     QDRSYALDPVRAIVDSVLGDAAATAGDLIVYTTLDAPAQRAAERAVQIQAAAIQGRAA
                     RPRSARTDVEGAVVALDPRTGAIRALVGGRRSVQRGFNRALDARRQPGSAFKPFVYAA
                     ALSAGYTPASVVDDSPIAVEDQGHIWRPENFGGAYGGPLTLRRALMRSANAATVRLSQ
                     AIGEKRVVAQARRSGIRSRMNAVPSLALGALEVTPLELVAAYAPFANGGLSAQPYLVT
                     RIEAGDGSVLWRSPVSQPQRVLGAAEAFQITSMLRSVVDGGTGRVVREMGVRGPVAGK
                     TGTTNNGTDVWFIGYTPTLVAGVWFGYDSPRPIGPNASGGRLAAPAWAMFYLNGWRER
                     SPVGAWDPPDDLVERRIDAYNGDLANEWCPTTQREWFKPGTEPTRLCRDHDAPLLDRL
                     EDFGRKLGKVLKGILGEL"
     gene            complement(6688..7314)
                     /locus_tag="VGQ24_08535"
     CDS             complement(6688..7314)
                     /locus_tag="VGQ24_08535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454923.1"
                     /translation="MITQQRRNDDAEDLGSASRRGGGGSGAGTLFLATMLGVGLGLLA
                     APQPGTKTRKLLLKRLAALGEGVGEGLEEVQDLSSKAKKRAKQRLTQLRDDAEEGLEG
                     VEDRWQHAKRRFRHVDEDESDSRPLGTILAIAAGVAATYFLTSDRAAPVRSRVQHAAS
                     DVKRRATDEWDRFQRGGTRGGGERSASQEGRSETRAGSTPSDEAPQAS"
     gene            7741..>8616
                     /locus_tag="VGQ24_08540"
     CDS             7741..>8616
                     /locus_tag="VGQ24_08540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454924.1"
                     /translation="MYLVELSPGKEELYRSSDELALAIRNGDVDGRSRIYHRATAKWI
                     SITLHPQYKAIITTPREEPPARPARKGWTFLGGINPAPETASEPAVSNGHLLHHWRRP
                     LALGISGVLLMLGIQLAFSGPRPPWAGRGRVVATKSPHRTPAVAREPAERQEMVSLAS
                     TTTLWPAQAGRAEVVRAIDSVPAAGVTDVALVLPRAPRLRSKTLRAALESETPKEGYG
                     KTVEAMLGRYAGAHDSARERLESGIRVARLGRLFAGPRLNPNGGVTDTRMSLAGAANF
                     IRVYRQQQAAIEAAYQ"
BASE COUNT         1508 a         2872 c         2755 g         1481 t
ORIGIN      
        1 gctttcgtcc tgagccggtc tcgcgggaga caatcgagca gctgttggag tgcgcggtgc
       61 gggcaccgaa tcacaagctc actcagccgt ggcgattcac cattttgacc ggagccgcgc
      121 gagaccggct cgccgacctc agggccggac accggctcaa gcgattcggt gacccgtcgg
      181 cacccgaggc gttggcggcc gcggacaagg tccggcacga aaccagggac gtacccgtat
      241 tcgtggtcgt catgtcggcg gtgaacccgg acgaggtcac ccgcgaggag gactacgcgg
      301 cgaccatgat ggcggtggcc aatctgatgg tcgccgccga gtcacttgga ctgggaacct
      361 atctcaagac cggtggcgtc atgcgcgatc cggcggtctt ggagctggcc cgggtaccgc
      421 agggtttccg catcgttgga atcatctcgc ttggctatcc cgccgaagta gaaccacctc
      481 gccggcgaaa gcccgcgacg gagcttacct cgtgggtggg ctgaacatcg gcggggcggg
      541 aggagccctc cacccccagt agcctttcaa atgtgaccgc gtcccgtaag gcaaatcctt
      601 tccagtcatt gttgaagtag atgtatacct ccttgcccga agcggcgagc gcccgtacct
      661 gtgcagccca tgatttcaac tcctctctgg cgaagccacc ggtgggctcc tgtccgcggt
      721 gcatgcggat ataggtaaac ggcgccgtgg tgatgcggtc aggctcgagc ccgccgccga
      781 ctgggataca gagcgctacg cctccctctg ccagaagccg gtaggtctcg ctcgtatgcc
      841 agctcgggtg acgaaactcc accacccagc gctggttggg agtaagcaat gccagaaagt
      901 cccgcaggcg ggcggtgtcg atctgctggg ttgggggaag ctgaaacagc accgggccga
      961 gcttcggtcc cagcatggcc gcccgttcca tgaggagcgc aatctcgtcg gcggcgttgt
     1021 gcaggcgctt gatgtgggtg atgtagcggc tcgccttgat cgcaaaatcg aagtcggtcg
     1081 gggtgctctc tcgccagcgg agaaacatct ccggcgtcgg caagcgatag aaaggattat
     1141 tcagctcgac ggtgcgaaag cgcgccgcgt aataggccaa ctcctgcttg gccgtcaaac
     1201 ctggcgggta gaacacaccc ttgcgccaat gcgggtagac gtacccggac gtgccgatcc
     1261 gaacctccgc catctggggc atgatcacca gcgctgttgc agcatgtcca tttccgggct
     1321 aaacttgcgg acctctccgg cagccctgga gcgggcagcg tgagccgcgt caccgcacct
     1381 gagcctggct gggtgacaac ctcctcggct ggctgtggcg tgtggctgga gccgcgcggc
     1441 acgaggccag aagaggtgca cattccactg gaggggtgaa atgaaggtac tcacaggctt
     1501 ggcgctcctg atcgggttag ctgcatgcgg cccgcgagga gaccgggaaa ctggccgggt
     1561 cggggcggac acttcgctga tgacacggca gacgcaggac accgcgatcg tcaccagcga
     1621 cacgacggtc aacgtggata cgacgaagaa ggaaggcgat aaggcagtga ctaaagactc
     1681 ggtgaaaaag tagtcctctt tggtcccact gcttaattcg tgaacgcctg tcggcgtcgg
     1741 cccagccgac gccggccagg ttcgccggcc agccagaccc atgggaaagg cagagcattt
     1801 ccaccgtgcc cgcacagagc acctcccgct ccggacaact gctgctgttc agtcgtaact
     1861 tcatcaagca tccacgcatg ctcgggagct tgatccccag ctcacgtttc ctggtcaacc
     1921 acgtcctggc cgaagtcgac tggagccgcg cccgagtctt cctcgagtac ggacccgggg
     1981 tcggcacgtt cactgctgag attctccgga ggatgcgccc cgacgcggtg ctggtggcgc
     2041 tggagaccaa caccgacttc gtgcgcttcc tccgccgccg cttcaaggac gatcggctcc
     2101 atatcattca cggatccgcg gcggatgccg atgcggcgtt ggccaggctg agactctgcc
     2161 atgccgacta cgtgctctct ggtattccgt acaccaccat gccgccggag ctccgggaga
     2221 cgatcctccg aaagacgcac tcggtgctcc atcccgacgg tgccttccta gtctatcaat
     2281 tcacccgcag cgttctgccc taccttcagg aagtgttccg gctggtccat caggatttcg
     2341 agccgctcaa cgtgatgccg gcgcgcttgt tttattgccg gcaccaggtc gagaatggaa
     2401 acgggcagcg gtctaacggt tctgcgcaat cgccgtctcg tcagcctgcg gtgcctgagc
     2461 cgattgggca tgccagacct gctcgatcgt ccggctgatc tccggcagga cgtcctcgcg
     2521 taccggcagg tcctcctccc gacggtatcg aaccaccgca tccggcacat taggcggccg
     2581 gcatcacatt gccggtctgt cgggcatcgg gctgtgccca ccgtcacggc ttttggctgc
     2641 ttcggaagga gtctcgcgtg agccggttca ttggtgcgca cacagtcgcc aacggcggaa
     2701 ttcacatggc tgcgctccgg gcggggaatg ccgggatgac cgcgcttcaa atcttcaccg
     2761 caccgcccca gtactacggc gacaaggctt ccgtgaagcc cgagcgggtc cagcgcttcc
     2821 gtgccgcact ggatcaagcc gggatacggc ccgagcaagt cgtggtccac ggtgcctatg
     2881 tgctcaatac cgccaccgac gacgagacga aatggagccg ggcgcaggcg gggctacgga
     2941 aggagctgga gcggtctacg gccctcgggg tgggaagcgt gtgctttcat cccggagcag
     3001 cgaccagtgg cgatcgcgag gcatccaccg aacgcgtcgc gagggcgatc actgatgcgc
     3061 tcgaggcagt gcccggccag acgaggctgc tggtggagaa cacagccggg gcgggtcaga
     3121 cggtcggccg cactccggcg gagatcggag cgatcctgca tgccatcccc cctcatctgc
     3181 gccagcgcac cggctatggc ctcgacacct gccatctctt tgcctcgggt cttgacatta
     3241 ccgtctccga ggcggctctg aggcgagttc tcgacgattt cgagagagcc gcggatgccc
     3301 cgccctcgtt cttccacctg aatgacagcg aaggagcgct ggggtcgaac aaggacaggc
     3361 acctgctcat cggcgagggg cggatcggaa gggaggcctt ccgctggctg ctgggggaca
     3421 cgcgagccac cgcgattccg ctgatattgg agacaccgca ggagcactgt gacattgcag
     3481 atgacgaccc ctcgccggac ccctacgatc tggccatgat gaagctcctg agctcgatga
     3541 tgatctgagc agtacagcgg ccactactct gcagctcgcc gcgcttctcg cagatccgac
     3601 ccagtcgagt atcccgccag ccccttcacg gaccggacct ggggtagcga tatcgcgcgc
     3661 tccagccgta agtcgttgac ggggcacggc cagtcgtgcc cgtacgcttt ctttacacca
     3721 gacgtgcccg gttcttgcgt acctggaggc gggaagacga acgcccccat gtcgcacaag
     3781 gaccgtcatg cagacgacac cgagctcatc ccagtcagtc cagcacacac ccagccgcgg
     3841 attcctgacg tttctggcgg ccgcgggctt tgtgggagcg atgctcctga caccttccct
     3901 ggaactcgac ccgccggtcc agcgccttgc atcacgccag ccatccgtcg aaccgactac
     3961 gattccacct gccgacagta cgacgctgga aggccaggtc gtcgcccgat acgaccacct
     4021 gccactggcg cagatccttc gtcgcactgc cgagccggag atcgccaacc gggtcgcgcg
     4081 cgccatcgtg aaggaggcgc ggcaactcca gcttccgccc cgtctgctcg ccggggtgct
     4141 gctcaccgaa aacgcccggc tcgagcccga gacgatcagc agccggggag cggtcggact
     4201 gatgcaggtg atgcggttcc acgccggcgt gttcgactgc gattccgacg atcttctcca
     4261 ggtcgaagcg aacatctgcc atggcgcgcg cgtgtttgcc ggctacctca agcgaaccaa
     4321 cgatgtgcgg tcggcactac tgcggtacaa cgggtgcgtg cggagcaggg tgactcagaa
     4381 ctgccggcgc tacccctcca aggttctccg gcaagcggag cggatcaggc atcagctcct
     4441 gctatatctc ccgcgcaatc ggagtacggc cgtgaccagc ggctcggctc ccacttcata
     4501 gtcctcgtct cactacagct ccccgagtat ccctttcagc acctttccca gcttccgtcc
     4561 aaaatcctcg agtcggtcga gcaacggcgc gtcatggtcg cggcagagcc tggtcggttc
     4621 cgtgccaggc ttgaaccact cgcgctgagt ggtcgggcac cactcgttcg ccaggtcgcc
     4681 gttgtaggca tcgatgcggc gctcgaccag gtcgtcgggc ggatcccagg ctccgaccgg
     4741 tgatcgttct cgccagccgt tgaggtagaa catcgcccag gcgggagcgg cgagccgtcc
     4801 gcctgaggcg ttgggcccaa tgggacgggg cgagtcatag ccgaaccata cgccggccac
     4861 gagcgtcggt gtgtagccga tgaaccagac atcggtcccg ttgttggtcg tcccggtctt
     4921 accggcaacc ggtccccgca cgcccatctc acgcacgacc cggccggttc caccgtccac
     4981 caccgacctc agcatcgacg ttatctgaaa ggcctcggcc gcccccagga ctcgttgggg
     5041 ctgagaaacg ggcgatcgcc agagaacgct tccgtcgccc gcctcgatcc gggtcaccag
     5101 gtacggctgg gcgctgagtc caccgttggc gaaaggagcg tacgctgcga ccagctcgag
     5161 cggcgtgact tccagggcgc cgagcgccag cgaaggtacc gcgttcatcc ggctccggat
     5221 tcccgaccgg cgggcctggg ccacgacccg cttttcgccg atcgcctggc tcagccgcac
     5281 ggtcgccgcg ttggccgagc gcatgagcgc gcgccgcagc gtgagcggtc cgccataggc
     5341 tccaccgaaa ttctctgggc gccagatatg gccctgatct tcgaccgcta tcggtgagtc
     5401 atcgaccacg ctggcgggtg tgtaccccgc cgagagcgcc gcggcgtaga cgaacggctt
     5461 gaacgccgag ccaggctggc gccgggcatc gagcgcccga ttgaacccac gctgcaccga
     5521 tcgccggccg ccgacgaggg cccggatggc gccggtccgg gggtccaggg cgaccacagc
     5581 tccctcgacg tcagttcgag cggatcgggg acgggcggcc cggccctgaa tggccgccgc
     5641 ctggatctgg acggcccgct cggctgcacg ctgagccgga gcatcgagcg tggtatacac
     5701 gatgaggtcg ccggcagtgg cggccgcatc gcccagcacc gaatcgacta tggcccgaac
     5761 cgggtcgagc gcgtacgacc gatcttgggg ggggcgccac tcggcgggtg ccaatctcag
     5821 gcgctcggat tgggcgcgac tggcgccttc cgaggtcgcg taaccctcac gtaccatcag
     5881 cgagagcacc aggttccgcc ttgcgatggc gcgttcgggg tgccgtcggg gagcgtagac
     5941 cgacggtccc ttcgcgagac ccgcgagcgt cgcggcctcg gccagcgaga gacggccgac
     6001 gctcttgcca aagagatccc tgctggcggc ttcgataccg taggtgccgt tgcccaggta
     6061 aatcacattc aagtaggtct ccagaatctg ctgcttggtg aggttggcct cgagacgccg
     6121 cgccaactcc agctcgatca gtttgcgacg gagactgcgc tcgccggaga gatgggggag
     6181 aaaggcgttt ctcaccacct gcatggtgat ggtactgaag ccctcccgga agccgagggt
     6241 ggagaggttg cgcagggcgg cccggccggc gctccgccaa tccacgccgc cgtgatagta
     6301 gaaccgccgg tcctcggtgg cgatgaacgc ggcccggacg tgtctgggaa cccgagcgag
     6361 cggcacattg atccggcgca cgtagctcag acgcccgatc cgagtgccgc ggtggtcgag
     6421 cacctggctc ccctcgctgg gccggaacgc ctggatctgg gaagttgacg ggcagccgta
     6481 gaagccacag gtactcaccc acaaggtgag accaagaagg aacgcggcac ccagcaccag
     6541 cgccaggagt accggcctgc gccagcgtgg ctgcccgcca gtgagccatt cgagtccgcg
     6601 cttccagccg gtcatagccc tcgtacctgg acatggaaaa cggccccaca tcccggggcc
     6661 gtttcgctga atccgaagcc ggcttgctca gctcgcctgc ggggcctcat cagacggcgt
     6721 ggagccggcc ctggtttcgg agcggccttc ctggctggcg gaccgttccc cgcctccacg
     6781 ggtgccgcct cgctggaacc ggtcccactc atcggttgcg cgccgcttca cgtcgctggc
     6841 cgcgtgctgg accctggagc gcaccggcgc tgcccgatca ctggtcagga agtaggtagc
     6901 cgcaacaccg gcggcgatgg ccaggatggt gcccaggggt ctggagtcgc tctcgtcttc
     6961 atcgacgtgc cggaacctcc gcttggcatg ctgccagcga tcctccacgc cctccaggcc
     7021 ttcctctgcg tcatcgcgca gctgcgtcag tcgctgcttg gcccgcttct tcgccttcga
     7081 gctcaagtcc tgtacttcct ccaaaccttc cccgacgccc tctcccaagg cggcgagccg
     7141 cttgaggagc agcttacgag tcttggtgcc gggctgaggt gcagccagca ggccgaggcc
     7201 cactccgagc atcgtggcca gaaacagggt accagctccg gaaccgccgc cacctcggcg
     7261 agatgcagac ccaagatcct ccgcgtcgtc gttcctgcgt tgctgtgtga tcatgaaccc
     7321 tccaatcgcc gccggcaggg ggcgagctct agactgaagc cggtgctccg gacctgccag
     7381 tccggaatgg gacctttccg cactctaatc tatagtgccg gcgaaggaaa catcttgcat
     7441 tacaccatcg ctggtcgaaa aacgcaccgg cggcttcatg cctcccgaac tcccttgttg
     7501 gcgggagcaa ccctcgctgc ggcgcctctt cagtcctagc ctcgcaaagg aagccgctct
     7561 ggcccttggg cttacgcctc tctgtcgaat tggaaccggg ggaggcgcag cccaccggga
     7621 cgaataagca cggatctggc acttccggtc ttggtagacc tgcgaccgct cggaatctgt
     7681 tcactctacc cagggtccct ggcctcccgg ccggggctcg cgcaacgatt gagtgtgacc
     7741 atgtatctcg tggaactcag cccaggcaag gaagaactct accggtcaag cgacgagctt
     7801 gcgttggcca ttcgcaacgg cgacgtagac ggacgctcac ggatctatca ccgggcaacc
     7861 gccaagtgga tctcgatcac gttgcacccc caatacaaag cgatcatcac gaccccgagg
     7921 gaagagccgc ccgcccgccc cgcgcggaag ggctggacct tcctcggcgg tatcaatccg
     7981 gcgccggaga ctgcttcgga acccgcggtc tccaacgggc acctgctgca tcactggcgt
     8041 cgtccgctcg cgctggggat ttccggcgtg ctgctgatgc tggggatcca gctcgcgttc
     8101 tcgggtcctc gtcccccatg ggccggtcgg ggtcgcgtgg tcgcgacgaa gtcgccacac
     8161 cgcactccag cggttgcgcg tgagcccgct gaacggcagg agatggtgtc gctcgccagc
     8221 accacgacgc tctggcctgc gcaggcgggt cgggctgagg tggttcgggc cattgatagt
     8281 gtccccgctg ccggtgtcac cgatgtcgca ctagtgttgc cgcgggcacc acggctccgc
     8341 tcgaaaacgc tccgggccgc actcgagagc gaaacaccga aggaagggta tggtaaaacg
     8401 gtggaggcga tgctgggccg gtatgccggc gcgcacgact cagcccgcga gcgactcgag
     8461 agtggaatac gggtggcccg tctgggccgg ctctttgccg ggccacgtct gaacccgaac
     8521 ggtggggtca ccgatacccg gatgagtctg gctggagccg ccaacttcat ccgggtttac
     8581 cgtcaacagc aagccgcgat cgaggcagcc tatcag
//
LOCUS       DASYRV010000327        11040 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3655541, whole genome shotgun sequence.
ACCESSION   DASYRV010000327 DASYRV010000000
VERSION     DASYRV010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11040
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3655541"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1349)
                     /locus_tag="VGQ24_08545"
     CDS             complement(<1..1349)
                     /locus_tag="VGQ24_08545"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEV8454925.1"
                     /translation="MNPWCGLLALTCALPSWAAAQDSTTAPPAVQLVTLSLDEALRQA
                     RANSPVYRQTLNDASPARWSVRNAYGSLLPSVTASSDIGYTSSGQANFGSGFTRPTSA
                     FVTSGYSLGVEWRLSGRALTGPAQQKALQRATEEDITGAGVALIADISTQYLNALQAA
                     AQVGVARQQVRRNEDFLALARARYRVGQAILLDVRQAEVTKGTSDVALLRAVLAENEA
                     KLDLLRRMGVEPPAAIEQIVLSDSFPITPPGFQVDSLLALAERHNPVLRSLRAREHAA
                     GLDVRAAKADFLPSLSMRAGWSGFTQQFTNENVLLGETLAGAQAQAADCQYNNSVRSA
                     LSLGGEVGNCFATAGLVDGGAALLDPVAQQIRSQNSVFPFHYTGQPFQANLVLSLPIF
                     TGFSRSLRLSEARAQQDDADEEVRARRLLIRSDVQARQLGLQTAFQAIAVQASSREAA
                     "
     gene            complement(1485..2135)
                     /locus_tag="VGQ24_08550"
     CDS             complement(1485..2135)
                     /locus_tag="VGQ24_08550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454926.1"
                     /translation="MRLAAVLLLLPKAGQLLAQEPLETKLVIEQGGREIGREEFTLRE
                     GRGRGALGSSLIAMARYPANNPRLKLAATLEQTPEGALAKFQLEVDGPNGTTVILAAG
                     SGARLIIRTVAKGSEAGRELPGGPDVVLLDDQVFSLYCAVADVATPAGKALTAVFPRT
                     NRRASFVARRESGGGGGNTRVTLTGNINGTLVTDAQGRLFRLELTETGTVVSRAKD"
     gene            complement(2152..2868)
                     /locus_tag="VGQ24_08555"
     CDS             complement(2152..2868)
                     /locus_tag="VGQ24_08555"
                     /inference="COORDINATES: protein motif:HMM:NF014670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HEV8454927.1"
                     /translation="MNQDRRPWRLKEMTPGLVGEHLLARSTLIVPVGTTEQHGPHLPL
                     GCDTIIVERLADDLSESFGVPRTPTVEYGVHATTRPFPGSAALRRRTLHRVMNELIES
                     WEEGAGVREFMILTAQSSEGHLEALSTIRTDEATVQVVDIFSINFGSLLERPAPIQGG
                     ELDTSLLLYLAPHLVRMELARDFDVPANVLARYRPGQSRRLPEGSPGSVGYPSLASAQ
                     KGERLYTFMLDRVSRCLARS"
     gene            2884..6843
                     /locus_tag="VGQ24_08560"
     CDS             2884..6843
                     /locus_tag="VGQ24_08560"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEV8454928.1"
                     /translation="MIVVLAAGVAAAEWLRQPAPIWVGIAWTCVAAAVVAFWPLAGWR
                     RRILAALLLVLAASLTLSQRQLTAIETRWPDEREHRVTAASQHLAGDLHSALHQAERL
                     AEAAVRSAPSSRAEAFHTLERLVPPGGPEMSVVVFDQQGLPWAWAGRHRLPPQSQGDT
                     VASRASRYYVVLEARRHSADGRSAVAGVLIWAHPAVPDRGRSLTELFRASSEVDLAVY
                     PPGTAPDSADVFDYEEPTAAGPRLLFSVQPVPPEQGIAKELAFHRGSRAITGLVLLMF
                     AVALTVASSSLERFLLLPLLLWLAVRAPVGTALGLQSLFSPATFFRSVLGPLSGSAGV
                     LGLAGTLLTMAGVWLWRRRLPRRWYGVVLGIALLLASPYLISGLGQGITPPARGVPIG
                     LWLTWQLTLLVAASALIVGAAALFRGSGPESHTRWRIIAGAGIAFAAAIIGVLVWSPR
                     GGWPEWYTFLWTPALLLVALPAPRWAVIIGIALVAGSSAALVTWGAELSGRLQVAQRD
                     IARLGDEPDALALPLLERFGEQVRQSTAPSTASELYALWHGSSVGQQAYPAHLALWSA
                     AGELRDELTLDSLDLPPSLLATLVRNLTPSDSLEVAQLARVPGVHYVLLVRLAAGGVM
                     TASIGPRSELILPGRVGRLLDPSRHNAPLYTLTLAPAAGSGDAPPGRPRWRREGWSLH
                     SEYPLSLAGASRAVHAEVDLRGPLPLFVRGVLVVLLDAAALALLWFLAEFVAGARPPP
                     PRWRGLARSFRIRLAATLAVFFILPAVGFAAWSFARLADEAERSRDLLITQTLRDAAL
                     TGGVTLRGEAPAAEPLVDLSRRIDADLALFRGGTLAGTSTPVLEDLGVVGQLMDPRAF
                     ESLALDGELEVTQDGSIPQLAERVGYRVVEPGPPSDIGVLATPQLADDASLGARQLDL
                     ALVLLLATLAGVAAALSGAGIAARALSRPVAELRRSALALGKGHPMPAHSERPPLEFE
                     PVFGAFERMAADIQSSRSALEDARRRTAAVLATVATGVVGVDPRGRVLIANRQAVDLL
                     GAPLQEGEPFLERLSPEWSPLAAAVRRFLENPDGNGAAELEVGGRRLTLQLASLGPEV
                     RGVVMALNDVTDVSRAERVLAWGEMARQVAHEIKNPLTPMRLGIQHLRRVYRERRAEF
                     DHTLDETSARILAEIDRLDTIARAFSRFAAPADLSGTLDRIDLGVAVGEVVQLYQLAE
                     AGCEVQLKVEPPAFGAARTDEVKEVVVNLLENARNAGASVVRVTVGPGFIRVADDGAG
                     IPAELLPRVFEPRFSTTTSGSGLGLAIVRRLVESWGGRIEVESESGRGTVITVQLPD"
     gene            complement(6850..8412)
                     /locus_tag="VGQ24_08565"
     CDS             complement(6850..8412)
                     /locus_tag="VGQ24_08565"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEV8454929.1"
                     /translation="MMGPSTRARWCGLVAIVGLAVISGGWLLRRKAAPEGSVYQQARL
                     FENVVASIHNHYIDSMGEGELYQTAAKSLVGSLRDPYAELLSRESYRQYQRQMSGTEV
                     DVGWNPELGSGRSAIAPGDEVLSIDGKSTRGWSARRVEEALTGGSGAFVTLVVRPRGS
                     TLPVVRRLTRTVVHVPATSQGILLGSGVGYIELRRISDGAAAELRQAVDRLVSEGMTS
                     LVLDLRGDPGGLINEGVRVASLFLNPGDTVAISRGRSPDHSKVYLAGQSGNWNELRIA
                     LLVNHGTASSAELVAGALQDHDRAVIVGTPSFGKGVLQTTYPLGDEIALKLTTARWYT
                     PSGRSVQRPRPDVEGAIGNRIPALAPRIFHSNAGRPIPDASGILPDLTVRGAPRSDAE
                     RSLLAALGEDLSLFRLVLSDYAAEVRRTAPPRSELFRVTDEMRNQTYDRLQQIGLELP
                     RPTFDNASGYVDDQLGYEISRAVFGPAVEVRRRALSDRQMQTAVRLLRRARTQEHLLA
                     VAAAERSRGTIR"
     gene            complement(8533..8988)
                     /locus_tag="VGQ24_08570"
     CDS             complement(8533..8988)
                     /locus_tag="VGQ24_08570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454930.1"
                     /translation="MRRILYGVLLILGAGACAAPRAAGAPLAPLGRSWAVPTLGLYQE
                     WWDKTVACSGRPGKMTDVSFYAVDAPAGAIELAGEMAHAWWVREGNRIYLPASALGEE
                     WLVRHEMLHALLQRGSHPTEVFVDACHVASAAVWRDSTLTVDPGNPRGQ"
     gene            9149..10687
                     /locus_tag="VGQ24_08575"
     CDS             9149..10687
                     /locus_tag="VGQ24_08575"
                     /inference="COORDINATES: protein motif:HMM:TIGR00368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HEV8454931.1"
                     /translation="MLARIRSAAVLGIDAYPVDVEVDITNGLPSFSTVGLPQGAVKEG
                     RERVGAALVNAGFSFPLRRITVNLAPADIRKNGSAFDLPIALGILVASGQLPEDRLRN
                     QMVLGEVGLEGDLRPVRGALSMALAARAAHHTGVLLPHANVPEASVVEGVEVCGARTL
                     LEACAHLCGQHTIPPARADMATLMAVTNHDQTDFNDVRSQAAAKRALEVAAAGSHNIL
                     LIGAPGAGKTMLARRIPSILPSMSLEEALETTKIHSVAGTLPPGQSLLTVRPFRAPHH
                     TISDAGLIGGGSSPRPGEVSLAHGGVLFLDELPEFRRNVLEVLRQPLEDGVVTLSRAA
                     VSLTYPARFMLAAAMNPCPCGYFGDPSHSCSCGTLAIERYRSRISGPLLDRIDIHLEV
                     PSVAYGDLVGDRSEETSGAIRARVEQARAVQRTRFQGQRGVHANAHMTARDLRRHCRL
                     SEPVESVLRQAVTRLGLSARAYHRVLKIARTIADLAGSAELTTAHVSEAIQYRSLDRK
                     REFA"
     gene            complement(10846..>11040)
                     /locus_tag="VGQ24_08580"
     CDS             complement(10846..>11040)
                     /locus_tag="VGQ24_08580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454932.1"
                     /translation="WQVMAMSATFAGNLLLVGSMANLIVAERAEARGVTIGYWEYAKA
                     GVPVTLSTLAWGIIVLALTG"
BASE COUNT         1700 a         3711 c         3760 g         1869 t
ORIGIN      
        1 gcagcttcac gactggaggc ttggactgcg atggcctgaa atgcggtctg caggcccagc
       61 tgccgggcct gcacgtcgct ccgtatcagc agtctgcggg cgcgcacctc ttcatccgcg
      121 tcatcctgct gggctcgagc ctctgagagt cgcagggatc ggctgaaccc cgtgaagatc
      181 ggcagcgaga gaaccaggtt agcctggaac ggctgtcccg tgtagtgaaa ggggaagacg
      241 ctgttctggc ttcgaatctg ttgggcgacc gggtcgagca aggccgcgcc accgtcgacc
      301 agcccggccg tggcgaagca gttgccgacc tcgcccccca gcgataacgc ggagcgcacc
      361 gagttgttgt actgacagtc ggccgcctgg gcctgggcgc cggcgagcgt ctcgcccaga
      421 aggacgttct cattggtgaa ttgctgagtg aatccgctcc agccggcccg catggagagc
      481 gatggaagaa agtcggcctt ggcggctcgc acgtcgagcc cggcagcgtg ctctcgggcg
      541 cgaagcgagc gcaggactgg attgtggcgc tcggccaggg ccagcaggct gtcgacctgg
      601 aatcccggcg gcgtgatggg gaatgagtcc gacagaacga tctgctcgat agccgccggc
      661 ggctcgacgc ccatccgtct cagcaggtcg agcttggctt cgttttccgc cagcaccgct
      721 cggagcagcg cgacgtcgga agtccccttg gtgacctccg cctggcggac gtcgagcaga
      781 atagcctggc caacccggta ccgtgctctg gcgagcgcca gaaaatcctc atttctgcgc
      841 acctgctggc gggcgacccc gacctgtgct gccgcctgaa gggcattgag gtattgggtc
      901 gagatatcgg cgatgagcgc gacgccggcc ccggtgatgt cctcctcagt agcccgctgc
      961 agcgccttct gctgagccgg gccggtcaga gccctgccac tgagtcgcca ctcgacccca
     1021 agactgtagc ccgaggtgac gaaggccgac gtcggtcggg tgaagccgct gccgaagttg
     1081 gcttgtcccg agctggtata gcctatgtcg ctggaggccg tgaccgaggg gagcaggctg
     1141 ccgtaggcat ttcgcacgct ccaccgggcg ggagaagcat cgttcagcgt ctgccgatag
     1201 acggggctgt tcgcacgggc ctgccggagt gcctcatcca gcgagagagt tacgagttgg
     1261 accgcaggtg gggcagtggt cgagtcctgc gccgcggccc aggacggaag tgcgcaggta
     1321 agcgcaagca gaccgcacca cggattcatg aacggtgccc tttatggtga gacgtgacgg
     1381 ggcgcaatac gcaggcctag ccgcacaggt ttcaacttgc gacaaagcac gtcctgtatg
     1441 ctcaacgagt tgggagaggt cctgcggctt tgtgactact cggatcagtc tttggcgcgg
     1501 gagacgactg tgccggtttc ggtgagctcg agacgaaaca gccggccctg cgcatctgta
     1561 accagcgtgc cgttgatgtt gccggtgagc gtcacccggg tgttgccccc gccgcccccg
     1621 gactcccgcc gggccacgaa cgaggcacgc cggttggttc gggggaaaac cgccgtcagc
     1681 gccttaccag ccggtgtcgc cacatctgcc accgcgcagt acagggaaaa cacctgatcg
     1741 tcgagaagga cgacgtccgg ccctccgggg agctcccggc cggcttcgga gcccttggcc
     1801 acggttcgaa tgatcagccg cgcgcccgag ccggccgcga gtatgaccgt cgtgccgttg
     1861 ggcccgtcca cctcgagctg gaacttggcc agcgcgccct cgggggtttg ttcgagcgtc
     1921 gcggcgagct tgagcctggg attgttggcc ggataccggg ccatggcgat caggctactg
     1981 ccgagtgctc cccggccccg gccctcccgc agcgtgaatt cttctcgtcc gatctcccgg
     2041 ccaccctgtt cgatcacgag cttcgtctcc aggggttcct gggccagaag ctggcctgcc
     2101 ttggggagga gaagcagaac cgcagcgagg cgcatgacaa ctccgatcac gtcaggatct
     2161 ggcgaggcag cggctgaccc ggtcgagcat aaatgtatac aggcgctccc ctttctgggc
     2221 ggaagcgagg ctcggataac cgaccgaacc aggagagccc tcaggcagac gccgggactg
     2281 tcccggccga taacgggcca gcacattcgc cggcacatca aaatcccggg ccagctccat
     2341 tcgaaccagg tggggtgcca ggtagagcag cagcgaggtg tcgagctcac caccctggat
     2401 cggagcgggg cgctcgagca gggagccgaa attgatgctg aagatatcca ccacctggac
     2461 cgtcgcctcg tcggtccgga tggtgctgag tgcctccagg tggccctcgc tcgattgggc
     2521 cgtgaggatc atgaactcac ggacgcctgc cccctcttcc cacgactcga taagttcgtt
     2581 catgaccctg tgaagcgtgc gtcgccgcag ggctgcactg ccggggaacg gccgcgtcgt
     2641 ggcatggacg ccgtactcga ccgtcggggt gcggggaacc ccgaacgact cggacagatc
     2701 gtccgccagc cgttccacga tgatggtgtc gcagcctagt ggaagatggg ggccgtgctg
     2761 ctcagtcgtg ccgaccggca cgatgagcgt ggagcgcgcg agcaggtgct cgcccaccag
     2821 gccgggagtc atttccttca accgccaggg gcgccggtct tgattcatcg cgggcaatcg
     2881 tgggtgatag tggtcctggc agccggcgtc gcggctgccg agtggctccg ccaacccgcg
     2941 ccgatctggg tggggatcgc gtggacatgt gtggccgccg ccgtcgtcgc attctggccg
     3001 ctggccggct ggcgccgtcg tatcctcgca gccctgctcc ttgtcctggc agcaagcctc
     3061 accttgtcgc agcggcagct caccgccatt gagacccgct ggcccgatga gcgggaacat
     3121 cgagtcaccg cagcatcaca gcacctcgcg ggagatctgc actccgcgtt gcatcaggcc
     3181 gagcgcctgg ccgaggctgc ggtacggagc gcgccgagca gccgggcgga ggcattccac
     3241 acgctcgaga ggctggtgcc accgggtggc cctgagatga gcgtggtggt gttcgaccag
     3301 cagggcctgc catgggcgtg ggccggacga caccggctgc cgccgcagag ccagggagat
     3361 acggtagcct cgcgtgccag tagatattac gtcgtgctcg aggcccggcg ccactctgcc
     3421 gatggccgca gcgcggttgc gggtgtgctg atctgggccc atcctgccgt gcccgaccgg
     3481 ggcagaagtc tgaccgagct gttccgagcc agcagcgagg tggatctggc cgtctacccg
     3541 ccgggcaccg cacccgactc ggcggatgta ttcgactacg aggagccgac cgctgcgggc
     3601 ccccggctgc tcttcagtgt gcagccggtc ccaccggagc aggggatcgc caaagagctc
     3661 gccttccatc ggggtagtcg cgcgatcacc gggctggtgc tactcatgtt tgcggtcgcc
     3721 ctcactgtcg cgtccagctc cctcgaacgc tttctgctgc taccgctgct gctatggctc
     3781 gcggtccgtg cgccggtggg aacggccctc ggattacagt ccctcttctc tcccgccacc
     3841 ttcttccgtt ccgtactcgg accactctcc ggctcagccg gagtgctcgg cctggccggc
     3901 acgctgctca caatggccgg ggtgtggctg tggcgcaggc gccttccgcg gcgctggtac
     3961 ggggtggtcc ttggcatcgc gctgctcctc gcctcgccgt acctgatcag cgggctgggg
     4021 cagggcatca ctccaccggc gagaggagtg ccgatagggc tctggctcac ctggcagctg
     4081 accctgctcg tcgccgcctc cgctctcatc gtgggcgcgg cggcactctt ccgggggagc
     4141 ggccccgaga gccatacccg ctggcgcatt atcgccggag cggggatcgc cttcgcggcg
     4201 gcgatcattg gcgtcctggt ttggagtcct cgcggcgggt ggcccgagtg gtacaccttc
     4261 ctctggacgc cggcgctgct gctggtggcg ctgcccgccc cacgctgggc ggtaatcatt
     4321 ggcatcgcgc tggtggccgg gagctcggca gcgctggtga cgtggggcgc cgagctgtcc
     4381 ggccgacttc aggtggcgca gcgtgacatt gcccggcttg gtgacgagcc cgatgcactg
     4441 gccttgccgt tgctggagcg gtttggcgag caagtgaggc agtcgaccgc gccttccacc
     4501 gcgtcggagc tgtatgccct ctggcacggc tcctcagtcg ggcagcaggc gtatccggcc
     4561 catctggcac tctggtcggc tgccggcgag ctgcgggacg agctcacact cgactcgctc
     4621 gatctgccgc cgtccctgct tgccaccctg gtgcgcaatc tcacgccgag cgacagcctg
     4681 gaggtggcgc agttggcccg ggttccgggc gtgcattacg tgctcctggt ccggctggcg
     4741 gcaggcgggg tgatgaccgc atcgatcggc ccccgatccg agttgatctt gccagggcga
     4801 gtcgggcgtt tgttggaccc gtcgcggcac aacgcgccgc tctacactct caccctcgcc
     4861 ccagccgcgg gcagcggcga cgctccccca ggccgtcccc ggtggcgccg ggagggatgg
     4921 tcgcttcaca gcgagtaccc gctctcgctg gctggggcca gccgggcggt tcacgccgag
     4981 gtcgatctcc gaggtccact cccgctcttc gtgcgcggcg tgctggtcgt gctgctcgat
     5041 gccgccgcgc tcgccctact ttggttcctg gcggagttcg tggctggagc ccgtccgcca
     5101 ccgccccggt ggcgcggtct ggcccgctct ttccggatcc gtctcgcggc gacgctggcc
     5161 gtgttcttca tcctccctgc cgtcggcttc gcggcctgga gctttgcccg gttggccgac
     5221 gaagcggagc ggagtcgcga cctgctcatt acccaaacgc tgcgcgacgc ggccctcacc
     5281 ggcggcgtca ccttgcgggg agaggcgccg gcggccgagc ctctcgttga tttgagtcgg
     5341 cgtatcgatg cggacctggc gctctttcgc ggcgggacgc tggccggcac cagcactccc
     5401 gtgctggaag atctcggtgt ggtgggccag ctcatggatc cgcgcgcctt cgagtccctc
     5461 gcactcgacg gagagctcga ggtaacccag gacggctcga ttccacagct cgccgagcgg
     5521 gtgggatatc gcgtcgtcga gccgggccca ccgagtgaca ttggcgtact ggctacgcct
     5581 cagctggcgg acgacgcatc actgggcgcg cggcagctcg atctggctct ggtactgctg
     5641 ctggccacgc tcgccggcgt ggcagcggcg ctgtcggggg ccgggattgc cgcgcgagcc
     5701 ttgtcccgtc ctgtcgccga gctccgccgt tcggcgctgg ccctcggtaa aggccacccg
     5761 atgccagccc attcggagcg cccgccgctc gagttcgagc cggtgttcgg cgccttcgag
     5821 cggatggcgg ccgacatcca atcgagtcgg agcgcgctcg aggacgcccg gcgtcgcacg
     5881 gcggccgtgc tcgcgacggt ggcgaccgga gtcgtgggtg tggatccgcg gggcagggtt
     5941 ctcattgcca accgccaggc ggtggatctt ctcggcgctc cactgcagga gggtgagccg
     6001 ttcctggagc gcctctcccc tgagtggagt ccgctggccg cggcggtccg gcgatttctg
     6061 gagaatcccg atggcaacgg cgccgcagag ctcgaagtcg gcggtcgccg gcttaccctc
     6121 cagctcgcgt cgttgggtcc ggaggtgcgt ggcgtcgtca tggccttgaa cgacgtgacc
     6181 gacgtttctc gcgccgagcg ggtgctggcg tggggcgaga tggcgcgcca ggtggcacac
     6241 gagatcaaga atccgctcac ccccatgcgg ctcggcatcc aacacctccg ccgagtttat
     6301 cgcgagcgcc gtgcggagtt cgatcacacc ctggatgaga cctcggcccg catcttggcg
     6361 gagatcgacc ggctcgacac catcgcgcgc gccttcagcc gcttcgccgc cccggccgac
     6421 ctcagcggga cgttggatcg gatagacttg ggcgtggctg ttggcgaggt ggtccagctc
     6481 tatcagttgg ctgaggcggg ctgcgaggtt cagctcaagg tggagccacc ggccttcggt
     6541 gccgcccgga ccgacgaggt gaaggaagtc gtggtgaacc tgctggagaa tgcccggaat
     6601 gcgggcgctt cggtcgtgcg ggtgacggtc gggccgggat tcatcagggt ggcggacgac
     6661 ggagcgggca ttcccgcgga gctgctgccg cgggtgttcg agccacgttt ctcgacgacg
     6721 acgagtggat ccggcctggg tctggcgatc gtgcgacggt tggtggagag ctggggcggt
     6781 cggatcgagg tcgaaagcga gagcggacgc gggaccgtga tcaccgtgca gctacccgac
     6841 tgaacggcgc tagcggatgg ttccccgcga gcgctccgcg gccgccacag ccaacaggtg
     6901 ctcttgcgtc cgggcccgac gcagcagccg cacggccgtt tgcatctggc ggtcggacag
     6961 cgcccggcgc ctgacttcga ccgccgggcc gaataccgcg cggctgatct cgtagccgag
     7021 ctggtcgtcc acgtagccgg aggcgttgtc gaaggtaggg cggggcaatt ccagcccgat
     7081 ctgctggagc cgatcgtagg tctggttgcg catctcgtcg gtgactcgga acagctccga
     7141 ccggggtggc gcggtccgtc ggacctcggc ggcataatcg gagaggacca gccggaagag
     7201 actcagatct tcgcccaacg ccgcgagcag cgaccgctcg gcatcggagc ggggagcgcc
     7261 gcgcacagta aggtccggca gtatcccgct ggcgtccggg atcgggcggc cggcgttcga
     7321 atgaaagatt ctgggcgcca gggcagggat gcgatttccg atcgcgcctt caacatcggg
     7381 ccgtggccgc tgaaccgagc gtccgctggg agtgtaccag cgcgctgtcg tcagcttgag
     7441 cgcgatctcg tcccccagcg gataggtggt ctgaagcacg ccctttccga agctgggcgt
     7501 gcccacgatg acggcccggt cgtgatcctg gagggctccg gccacgagct cggccgagct
     7561 ggcggttcca tgattcacca gcaacgcaat ccgcagctcg ttccaattac ctgattggcc
     7621 ggcaagatag accttggaat ggtccggcga gcgtccccgg gagatcgcga ccgtgtcgcc
     7681 ggggttgagg aacaggctgg cgacgcggac cccttcgttg atgagaccgc ccgggtcgcc
     7741 gcgaaggtcc agcaccagcg aagtcattcc ctccgagaca agtcggtcga ccgcctggcg
     7801 gagctcggca gctgcgccgt cgctgatccg gcggagctcg atgtatccga caccggaccc
     7861 gagcagaatg ccttgcgagg tggccggcac gtgaacgacc gtgcgggtga gacggcgcac
     7921 caccggcagg gtggacccgc gcgggcgcac caccagggtg acgaaggccc cgctgccgcc
     7981 ggtgagggcc tcctccaccc gccgcgccga ccagccgcgc gtgctcttcc cgtctatgct
     8041 cagcacctca tcgcccggcg caatagccga gcgtccgctg ccgagctccg gattccagcc
     8101 gacatccacc tcggtccccg acatctggcg ctggtactgc cggtaactct cccgggacag
     8161 gagctcggcg taggggtcgc ggagggatcc caccagcgac ttggccgccg tctggtagag
     8221 ctcaccctcg cccatggagt cgatgtagtg gttgtggatc gaagcgacga cgttctcgaa
     8281 cagacgggct tgctggtaga cactgccctc cggggcggcc ttgcggcgaa gcagccagcc
     8341 tccgctgatg acggccaggc cgacgattgc caccaacccg caccagcggg cccgagtaga
     8401 gggtcccatc atgtcgagat tctcccgcga aatgcctgaa gccctgccgg atgcatcccc
     8461 aaggaaaagg cgaatgccgt gctaactgct gcccagccaa tcagggcagc aaaatggggg
     8521 ccgaaccggg gtctattggc cccgcggatt ccccggatcc acggtcaacg tcgagtctcg
     8581 ccacaccgcg gccgaggcga cgtgacacgc atccacgaac acctctgtcg gatggctccc
     8641 gcgctggagc aaggcatgga gcatctcgtg ccggaccagc cactcctcgc ccagtgcact
     8701 ggcgggaaga taaatccgat tcccctcccg tacccaccag gcgtgggcca tctctcccgc
     8761 aagctcgatg gccccggccg gtgcatctac ggcgtagaag cttacgtcgg tcatcttgcc
     8821 cgggcggccg gagcaggcga cggtcttgtc ccaccattcc tggtagagtc ccagcgtggg
     8881 gacagcccag gaacgtccca gcggcgcgag cggcgcgccc gcggcccgcg gcgcggcgca
     8941 ggcaccggca cccagtatca gaaggacacc gtagaggatc cgacgcattc attgactccg
     9001 gagtggacac cgcgacggcg gcgggctagg ggtaactcca ccgtgcggcc aaaaagcgct
     9061 gcaggattcg gtccactttg gcgaaaacgg ggtacctgga ggggtcccgg ccccgtctag
     9121 cttctgaggg tctccacttg ggcaacgcat gctcgccaga attcgttccg ccgccgtgct
     9181 cgggatcgac gcgtaccccg tggacgtcga ggtcgatatc accaacggcc tgccatcctt
     9241 ctccacggtt ggccttccgc agggcgcggt gaaagaaggc cgggagcggg tcggtgcggc
     9301 tctggtcaac gcaggcttct cgtttcctct caggcgaatc accgtcaacc tcgcgccggc
     9361 ggacattcgt aagaacggtt cagccttcga cctgcctatt gcccttggga tcctggtggc
     9421 cagcggccag cttcccgaag atcggctccg caaccagatg gtcctcggcg aggtcggcct
     9481 cgagggagac ctccgccccg tacgcggtgc gctctccatg gccctcgcgg cgcgcgcggc
     9541 gcatcacacc ggcgtgctgt tgcctcatgc caacgtgccc gaggcctcgg tcgtcgaggg
     9601 ggtcgaggtg tgcggcgccc gcacgttgct cgaggcctgt gctcatctgt gcggacagca
     9661 cacgattcca cccgcccggg ccgacatggc caccctcatg gcggttacca accatgacca
     9721 gaccgacttc aacgatgtgc ggagtcaggc cgccgcaaag cgggcactcg aggtggccgc
     9781 ggcagggagc cacaacatcc tgctgatcgg ggcgcccgga gcagggaaga ccatgctggc
     9841 caggcggatt ccatcgattc ttccgtcgat gagcctcgag gaggctctag aaactaccaa
     9901 gatccatagc gtggccggaa cccttccgcc gggccaatcc ctactgaccg tgcggccatt
     9961 ccgggcgccg caccacacca tcagcgatgc cggcctgatc ggcggcggct cctcgccccg
    10021 tccgggcgag gtgagcctgg cccacggcgg cgtgctcttc ctggacgagc tgcccgagtt
    10081 tcgccggaac gtgctggagg tgttgcggca gccactggag gacggcgtcg ttaccttgag
    10141 ccgcgcggca gtgagcctca cctatcccgc ccggttcatg ctcgctgcgg ccatgaaccc
    10201 atgtccctgc ggctacttcg gcgatccctc ccattcgtgt agctgcggca cgctcgccat
    10261 cgagcgctac cgctcccgga tttcaggccc gctgctcgac cggatcgaca tccacctgga
    10321 ggttccatcg gtcgcctatg gcgacctggt cggcgaccgc tccgaggaga ccagcggggc
    10381 cattcgggcc cgggtggagc aggcgcgagc ggtgcagcgc actcgcttcc agggccaacg
    10441 cggggtccac gccaacgccc acatgacggc tcgcgacctg cggcgccact gccggctgag
    10501 cgagccggtg gaatcggtgc tacgacaggc ggtcacccgg ctcggtctgt cagcgcgggc
    10561 gtatcaccgg gtgctcaaga tcgcgcgcac catcgccgat ctggccggat cggcggagct
    10621 gaccacggcc cacgtcagcg aggcgattca gtatcggagc ctggatcgga aacgggaatt
    10681 tgcatgagaa accggccggc cacaactagt ctcggtcatt ccgggtcctc ctagtcgacg
    10741 actcggtcag catccctggt cgacccggca ctggtgtcac ggttcctcgc ctcgtgcgcg
    10801 acgccggact ttagacgcca cgaaggatcc taagaccgcc gcccttcacc cagttaaggc
    10861 cagcacgatg atcccccagg ccaacgtcga tagtgtcacc ggcactcctg ctttggcgta
    10921 ctcccagtag ccgatcgtga cgccgcgcgc ttccgcccgc tccgcaacga tcaggttggc
    10981 catcgagccc accaggagca ggttgccggc aaaggtcgcg ctcatcgcca tgacctgcca
//
LOCUS       DASYRV010000328        16917 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_338942, whole genome shotgun sequence.
ACCESSION   DASYRV010000328 DASYRV010000000
VERSION     DASYRV010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 16917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16917
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338942"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            120..1076
                     /locus_tag="VGQ24_08585"
     CDS             120..1076
                     /locus_tag="VGQ24_08585"
                     /inference="COORDINATES: protein motif:HMM:NF039315.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5996 family protein"
                     /protein_id="HEV8454933.1"
                     /translation="MATSVNPKIEGHAAWPSLPLAQWNDTRDTLHRWLQIVGKTRLAL
                     AHPINHWWHVALYPTARGLTTSPMPYDAHLLEVELDFIDHNLLARIGNGVTRVMPLVP
                     RSVADFYHDYTSLLESVDVHVRIRPVPSEMEDELPFTEDRQHRSYDPDAATRCWMILS
                     QASQVIQQFRGRFIGKCSPVHIFWGGFDLACTRFSGRRAPLHPGGIPHLPDRVVWESY
                     SHECLSAGWWPGTPGGPVAEPAFYAYSYGEPPGFAEARVRPDAAYYSPDLKEFILPYE
                     AVRTAARPDKMLLDFLQTTYEAGADLAGWDRQALERRDEGQL"
     gene            1073..1345
                     /locus_tag="VGQ24_08590"
     CDS             1073..1345
                     /locus_tag="VGQ24_08590"
                     /inference="COORDINATES: protein motif:HMM:NF014229.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UBP-type zinc finger domain-containing protein"
                     /protein_id="HEV8454934.1"
                     /translation="MKCTHLDQVRPVHANTPDGCEECLKTGSWWVHLRLCLTCGHVGC
                     CESSPGKHATKHFHGTHHPIVKSFEPGEDWGWCYPDQLMFEPAPRP"
     gene            1511..4270
                     /locus_tag="VGQ24_08595"
     CDS             1511..4270
                     /locus_tag="VGQ24_08595"
                     /inference="COORDINATES: protein motif:HMM:NF037144.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HEV8454935.1"
                     /translation="MPTLSALEAQLPPLRPSLARDTASTTPRARAGRWLTLAGLLLVA
                     CQGGDGLLLPSEGEPAAIEVVRGDGQSGRVGEPLADALVVEVTDTRNRPVEGATVTFE
                     LTSAGPGADIVPHTATTDANGQANAQIVLGTTIGRQTGEARLAMHSGTLPPKATFTAM
                     AVSENANSMAAVAGEDQTGHVSAPLDERLIVQVTDAFGNPIAGVPINWEAVGGGTVSD
                     ATVTTDDQGRASVERVLGPAAGQQTTVATSEGLAGSPVTFVHTALAGNASRLAIVSGD
                     DQTGQVGSQLAAELVVRLIDGDGNGVPNTAVAWVVATGGGNVTPASSNTDDEGRASAR
                     WTLGGTPGANRLDAVVSGVGVASFDAIATAGAPAALSIVTQPSSSARNGVRLERQPVI
                     QVRDAGGNAVARGGIQVSAAIGAGSGDLIGTRQRITDPTGQATFTDLAITGSSGTHTL
                     VFSSSGYASATSNGIDVRAISTITTILTDTPDPSISGAAVTVGFQVTSEGPTPTGSVT
                     VTASDGAASCIGSLIGGSGSCLITLGNTGDRILTATYSGAPGLNPSSGTEPHRVNAVA
                     PPNQAPHADFSSHCEGLTCQFTDTSSDPDGQVTGWSWSFGDGSPSSSDRNPSHTYAGS
                     GTFTVMLTATDNGGATNATSAEVKVNAPHTNKAPQAEFEVHCTDLTCTFTDKSKDGDG
                     NIASWHWDFGDGQSSSDQNPSHLYGTAGSYHVTLTVTDNEGAPDSETRDANPTAPPNQ
                     PPTAEFTWSCAGLDCSFTDGSSDSDGTIAGWSWEFDDGTSSTSQSPSHSYLAGGTYHV
                     KLTVTDNFGAGESVQHDVTVTPPPPPNQAPSAVPDNYSTPQDVALTVVTPGVLTNDTD
                     PDGDPLTAQLSGSTANGTVSLQGDGSFTYTPNAGFTGDDSFSYTASDGSLTSTATVTI
                     TVNAP"
     gene            4384..4457
                     /locus_tag="VGQ24_08600"
     tRNA            4384..4457
                     /locus_tag="VGQ24_08600"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4418..4420,aa:Val,seq:cac)
     gene            4570..5670
                     /locus_tag="VGQ24_08605"
     CDS             4570..5670
                     /locus_tag="VGQ24_08605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454936.1"
                     /translation="MGIPFLMLEELSEVLTAEDPTACDLLTYAAGRGHRDFPCLSRTE
                     NPSSCIPALDFSPWLRERVRREDIEGLGEYLWRVRRANPGLDGNEQVHRRYIDLARAI
                     MAAPIDRHLTRGSEEAYVDLRVALFMIGAHEGFCGFIMAGEAADFMAAVMAPHSLSLA
                     DGHELLHQRNAFVLEMSRGMDYWALWTPLAADALRSPIPPHDTRFQLLLAALAKLPLG
                     ARAHAVDALRHLSADPGAPRSLSSLCRQETRRHGVDCTESSRLIVESGLVSPASDMQT
                     WLTGCTRRDLLKLLAEADYRAPKSWSKERLAAVAMTERPDAVREKMAESGAVELALDH
                     AEAAHRVRGYLEDVKETWRVWLGFGTGVITEG"
     gene            complement(5667..6701)
                     /gene="rfaE1"
                     /locus_tag="VGQ24_08610"
     CDS             complement(5667..6701)
                     /gene="rfaE1"
                     /locus_tag="VGQ24_08610"
                     /inference="COORDINATES: protein motif:HMM:TIGR02198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase"
                     /protein_id="HEV8454937.1"
                     /translation="MRQSPPPLSRDRVLHLIHRMKSSRVVVVGDIMLDRYLTGDTERL
                     SPEAPVPVVTVHERHAALGGAANVAANIAAMGAKCLLVGAVGDDADGAAIRQELAVAR
                     LEDRHVVTIAGRPTTSKTRIIARSQQIVRIDEEVETLVDGADLNRLIAAARAALADAD
                     ALLLEDYNKGALPPGLIVAVMEVAKRRGIPVVVDPKYRQFFEYSGATVFKPNRRELES
                     ALGAAVDLQNGDALPEVLTRLKVDNLLVTLGADGMVLVTKDGTLTQIPSIARQIYDVS
                     GAGDTVTAWLGTALAAGASVREAAQLANYAAGVEVGKPGVATVTPEEVLAVHEERFDQ
                     IGKLRRGGLI"
     gene            complement(6698..8206)
                     /locus_tag="VGQ24_08615"
     CDS             complement(6698..8206)
                     /locus_tag="VGQ24_08615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454938.1"
                     /translation="MRPLLLAAVLAGVLTHPARAYAQASPYIPLDDPRLPLLEHLITR
                     GEIEDPSPMIRPFRRADAAEVLAAADPLGSSSTARLIQKMRSDFADQAGNAWAIEGRA
                     GGQGYTHARRDLLHPAGADRVRPYAELGGWVTFGNIVLVTRPVAEPRLIDDPDWRGRP
                     DLKFTGRIADAYVSAQFKYGNVFYGQMDRNWGPVGLPGIPLSNYAYERQGLGIEIGTK
                     DLRLSAFATDLQDEVDSLGRTVHRYYFVHRLHARPSRRLTLALWEGVVLAGADRNFET
                     RYRNPLSFSYLANTIGLGDKGNVLLGLDAHWRAFRHTVFEAQLAVDDFQYQNRSDPGR
                     LPDRWALTIAAFGPLGPLLAWRAFYTQASSLAFRTFSRFESFTDNGVGLGRNFSDMDQ
                     LTLSVSVPLAGRWLAIPDLTLLRQGEGDIEDPFPATPVEAEQTPQIFIGVVERTFRLG
                     LGIQGRQGPLDVQANAGLHHIVNWRHEEGRTVNRFEGRIQATLGLRRQGVLR"
     gene            8375..9019
                     /locus_tag="VGQ24_08620"
     CDS             8375..9019
                     /locus_tag="VGQ24_08620"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEV8454939.1"
                     /translation="MMAKQDNLDPQTRDLVRFAAAIAQGYEPALRERAGSLRLSQVPA
                     AWVEELILQSVLMVGYPRALVAFTMWRKASGAPAPNTDPDQDYGRAAEWTRRGEEQCA
                     VVYGENYQKLRQSVRALHPALDSWMITEGYGRTLARPSLDLRRRELCIVAQTAVLETP
                     RQLHSHLRGALNAGATFGQIEGTLSIVNPLLSFDQWKKVKELWRTVRQGWSPGN"
     gene            9019..10035
                     /gene="obgE"
                     /locus_tag="VGQ24_08625"
     CDS             9019..10035
                     /gene="obgE"
                     /locus_tag="VGQ24_08625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEV8454940.1"
                     /translation="MLIDRAVVRVVGGTGGSGASSFARFKYKPKGGPDGGDGGHGGSV
                     YVRADPNLATLLDYRYRTVWQADRGEHGKGKTQTGGSAEDIYLPLPPGTVVRDAATGD
                     LIGELLDPGDTLMVARGGRGGRGNARFATSTHQAPREWEPGEEGEDRQIELILKLIAD
                     VGLVGEPNAGKSTLLSVVSAAHPKIADYPFTTLEPNLGVVSLSGHRTFVMADIPGIIE
                     GAHEGKGLGFRFLQHVERTRVLAFLVPLGADDPQATYDRLRNEIQQYSPTLAEKQHIV
                     LLTKQDLQPPDHSLPELRAPDAAGVRAISSATGQGVEQLKEYLWKLVEESKATEAAET
                     VEDL"
     gene            10036..11139
                     /gene="dprA"
                     /locus_tag="VGQ24_08630"
     CDS             10036..11139
                     /gene="dprA"
                     /locus_tag="VGQ24_08630"
                     /inference="COORDINATES: protein motif:HMM:TIGR00732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HEV8454941.1"
                     /translation="MDDERLAYLTLTQVPGMGTSRLKTLLTAFPTALGAHSAPFEFLR
                     TLPGFSSATATALKATPMEVGRKMAEEADRLGAGILIPEDEVYPAELRHIADPPPVLF
                     TLGDQALFLRPAVAIVGSRDHSSYGAVVCRSIAGAAAGAGVTVVSGMARGLDAVAQTA
                     ALDAGGVTIGVLGNGLGVIYPAANRTLYERVARDGLLVTEFPPGERPSAGSFPRRNRL
                     ISGLSRVTVVIEAAAGSGALITAGTALDQGREVMAVPGNITSAVSFGTNRLIRDGAAP
                     VLEPADLLEHFAELTGSRPAVGVFPQATRDLPETLSPEERELAGLLSQDPVHPDELAT
                     RFNRPVGEVLGLLCGLEIAGVVEQRPGRVFCRV"
     gene            11394..12494
                     /gene="hemW"
                     /locus_tag="VGQ24_08635"
     CDS             11394..12494
                     /gene="hemW"
                     /locus_tag="VGQ24_08635"
                     /inference="COORDINATES: protein motif:HMM:TIGR00539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HEV8454942.1"
                     /translation="MHVYLHVPFCARRCSFCDFAIAVRKEVPSEAYVSTVLREWALWQ
                     SEPAWQDSSDIRSIYFGGGTPSRISPDAIARLLDRISGDRYVRADAEITLEANPDDVT
                     PGAAAAWRAAGVNRISLGVQSFNSRVLGWMHRVHTVEQIFRAVEAVRCAGIADLSVDL
                     IFGLPRAQERDWGGDLDQAFSLEPEHVSLYGLTVEAHTPLGHWTARGESTPVDEESYA
                     GEFLVAHSALTARGYEHYEVSNAARPGRRARHNSAYWQRAPFIGLGPAAHSGLGRERR
                     WNVRDWAAYERVVAAGKSPAEGRELLDDAAVALEELYLGLRTADGLAGNRVPPAVRRN
                     WEAEGWALPGTERVRLSAEGWLRLDSLVACIA"
     gene            12561..13598
                     /gene="hrcA"
                     /locus_tag="VGQ24_08640"
     CDS             12561..13598
                     /gene="hrcA"
                     /locus_tag="VGQ24_08640"
                     /inference="COORDINATES: protein motif:HMM:TIGR00331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HEV8454943.1"
                     /translation="MPMPDQLSERELRVLEAVVQTYIETAEPTGSQTIARKFGLGVSP
                     ATIRNTMSELEDKGYLFHPHTSAGRIPTDRAYRVYVDAIMQLSPPSHEQQDTLRAELV
                     GNRSAVEEILRRAAQVLGVLTQELGVAVAPALDQMVMERLELVQVSSERLLLVFNLRS
                     GVVRTIFVEVPGLLPQASVQQVAQILNERLSGLTLQEIRGTLPERLRDAGGTADGGEL
                     LNIFIAEGDGLFDLSNEENAVVLGSAQMLADQPEFASKSRMRDLLRLTEGRDLLKQAL
                     ESRRQRGLSITIGSENPDTRLSDFTLVTSSYEVGALKGVIGVMGPTRMPYDKIIGLVE
                     HTSRLVEGLLE"
     gene            13595..14719
                     /gene="dnaJ"
                     /locus_tag="VGQ24_08645"
     CDS             13595..14719
                     /gene="dnaJ"
                     /locus_tag="VGQ24_08645"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF008035.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEV8454944.1"
                     /translation="MSDFYDLLGVSREASETEIKKAYRKLAMEYHPDRNPSHGAEARF
                     KEITEAYEVLRDPQKRSAYDRYGKAGVAGGGFGFHHVDLSEALNIFMRDFGGMGGFES
                     IFGGRRARTDERRGQDIRVTVRLTLSEVALGAKKTVKLKSPERCTSCQGSGAKPGTKT
                     THCTTCGGTGEVRRAARSMFGQFISVAACPTCGGEGVTVKDPCEVCRGEGRVRGERTV
                     TVDVPAGVSANNYLTLRGQGAAGLRNGPSGDLLVMLDIKEDERFERQGNDLIYDLPLS
                     FSQAALGGEHDVPTPYGSESLRIPGGTQPETVLRLRGRGLPILGQDGKGDLLVRVHIW
                     TPERLTEEQERLFRELANHEGEPPKRAPGFWSKLKEALGA"
     gene            14716..15552
                     /locus_tag="VGQ24_08650"
     CDS             14716..15552
                     /locus_tag="VGQ24_08650"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEV8454945.1"
                     /translation="MTWWAIDVRTSAGQRDSVGAWLVARTGQAVEERDDGTLVAFAPD
                     EEAAAALVEELGREAAAPVAIEPRRIESTDWSTRWREGLGPRKLGCLTIIPSWLPEAS
                     EPDPLTIVLDPETAFGSGEHGSTRAALTLLSRLLRPDDRVLDLGSGSGILAIAAIKLG
                     AARAIGIEIDPEANEVAARNAARNGVSDRVEFLEGDAATLAPLVGPADLLLSNILRAV
                     NTALLPVAARALRPGGFAIFSGMEQPEAEEFRRTLSDGGFKLVQETLDAGWWGVAAER
                     PR"
     gene            15549..16271
                     /locus_tag="VGQ24_08655"
     CDS             15549..16271
                     /locus_tag="VGQ24_08655"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmE family RNA methyltransferase"
                     /protein_id="HEV8454946.1"
                     /translation="MRVLIPAGGPPGGWAAGDRVSLDDNEVHHLRVRRARDREIVELL
                     DGTGLRGTGRLLQTGNQWAVEVQSAEQESRPAELMLAVAAGDRDRFSWMVEKAVELGV
                     TRILPLETARSSGVATGVRDAHLRRLRRQALEATKQCGVAWAVQVEEPLSLDDFCGRP
                     LTGPGWLADRLGAPPPTRLGGSAMTVVIGPEGGLTDAERAGLVAAGYLPIVLGPYTLR
                     FETAALAAAVLATTARMRGSHD"
     gene            16264..16611
                     /locus_tag="VGQ24_08660"
     CDS             16264..16611
                     /locus_tag="VGQ24_08660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HEV8454947.1"
                     /translation="MTDCLFCKIVADEIPAKIVKRTGDALAFRDTDAKAPVHVLVIPT
                     RHIPAVRDAKGTDGERLLGRLLTFTAEVASELGLDGDGYRVVTNTGKNAGQSVDHLHL
                     HILGGRKMTWPPG"
     gene            complement(16661..>16917)
                     /locus_tag="VGQ24_08665"
     CDS             complement(16661..>16917)
                     /locus_tag="VGQ24_08665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454948.1"
                     /translation="SEGSASEHKTGAIPGFARRYSITRLVYVEVTGNARDAIAREKQI
                     KGWLRCKKLGLIEAENPAWVDLAEGYLGLSDPADPSLRSG"
BASE COUNT         2948 a         5460 c         5612 g         2897 t
ORIGIN      
        1 ggggcacgag gcggtcagac gctatcatta gtagaatcag tagaatcgct cggtagggaa
       61 gctcctgggc caccatatag cgtgatagtg tgggtcatcc attggggatg gggggtgcga
      121 tggcgacgtc ggtgaacccg aaaatcgagg ggcacgcggc ctggcccagc ctgccgctgg
      181 cccagtggaa tgataccagg gacacgctcc accgttggct ccagatcgtc gggaaaaccc
      241 gcctggctct ggcccacccg atcaatcact ggtggcatgt cgccctctac ccgacggctc
      301 gtgggctcac cacatcaccc atgccgtacg acgcccacct ccttgaggtg gagctggact
      361 tcatcgacca caacctgctg gcccgcatcg gaaacggagt cacccgcgtc atgccgctgg
      421 tgccgcgatc ggtggccgac ttctaccacg actacacctc cttgctcgaa tcggtggacg
      481 tgcacgtccg tatccggccg gtgccgagcg agatggaaga cgaattgccc ttcaccgaag
      541 accggcagca ccggtcgtac gacccggatg ccgccacccg ttgctggatg atcctctccc
      601 aggcgagcca ggtcatccag cagttccgtg ggcgattcat cggcaaatgc agcccagtcc
      661 atattttttg gggcggcttc gatctggcat gtaccaggtt ctccggccgg cgcgcgccgc
      721 ttcaccctgg aggcattccc cacctgcccg atcgggtggt ctgggagtcg tattcccacg
      781 aatgcctcag cgccggctgg tggcccggaa ctccgggcgg cccggtggcg gagccggcgt
      841 tttacgcgta ctcatatgga gagccaccgg ggtttgccga agcgcgcgtt cgacccgacg
      901 cggcctacta cagccccgat ctcaaggagt tcattctgcc ctacgaggca gtgcggaccg
      961 ccgcccggcc ggacaagatg ctgctggact ttctccagac cacgtatgag gcgggggcgg
     1021 acctcgccgg ttgggatcgc caggccctcg agcgccgaga cgagggccaa ctgtgaagtg
     1081 cacccatctg gatcaggtac gcccggtgca cgccaacacg cccgacgggt gcgaggagtg
     1141 cctcaagaca ggcagctggt gggtgcacct gcgcctctgt ctgacctgcg gccacgtggg
     1201 ctgctgtgaa tcatccccag gcaagcacgc cacgaagcat ttccacggca cccaccatcc
     1261 catcgtgaag agcttcgagc cgggtgagga ctggggctgg tgctacccgg accagctcat
     1321 gttcgagccc gcccccagac cttagcccca aaggcgtgct tgtccatggt gctatgcgtc
     1381 acctcagccg gcatttggcg catctagatt ggcgtcaacc ggccgggttt acccgcggac
     1441 ccgtaccgtt cacatagcag atgtccaact gactccagcc tcttcggagt cgttgtcgag
     1501 agtcgaaccg gtgcctactc tttccgcgct cgaggcccag ctcccgcccc tccgcccgtc
     1561 tctcgcccgc gataccgcga gtaccactcc ccgtgccagg gccggtcgat ggctcacgtt
     1621 ggcgggtttg cttctggtcg cctgccaagg aggggacggc ctgctgctcc cgagcgaagg
     1681 cgagccggcc gctatcgagg tagtgcgggg ggatgggcag agcggccggg tgggggaacc
     1741 gttggcggat gccctggtcg tcgaagtgac cgacacccgg aaccgaccgg tcgaaggcgc
     1801 cacggtcact ttcgagctga cctcggctgg gcctggcgcc gacatcgtgc ctcacaccgc
     1861 caccaccgac gcaaacgggc aggccaacgc gcagatcgtc ctcggcacca cgatcgggcg
     1921 gcaaactggg gaggcaaggc tggcgatgca ttcggggacc ctgccaccaa aggccacttt
     1981 cacggcgatg gcggtctccg agaacgccaa cagcatggcc gcggtagcgg gggaggatca
     2041 gaccggtcac gtaagcgccc cgctggatga gcggctgatc gtccaggtga cagacgcctt
     2101 cggcaacccg atcgcggggg tcccgatcaa ttgggaggct gtgggtgggg gaacggtcag
     2161 cgacgccacc gtcactaccg acgaccaggg ccgcgcgtcg gtggagcggg tcctgggtcc
     2221 cgccgctggc cagcagacca ccgtggccac ctcggagggg ctcgctggct cacccgtgac
     2281 cttcgtgcac acggccctgg ccgggaacgc ctcgcgcctt gccatcgtct cgggcgacga
     2341 ccagacgggc caagttgggt cgcagcttgc ggccgagctt gtggtgcggc tcatcgatgg
     2401 cgacgggaat ggggtaccca acacggcggt ggcctgggtg gtggcgaccg gcggtggcaa
     2461 cgtgacgccg gccagcagca acaccgatga cgagggccga gcgtcggcac ggtggacgct
     2521 tggaggtacg ccgggagcaa atcggctcga cgccgtagtc tctggggtgg gtgtggcgag
     2581 cttcgatgcg atcgctacag ccggcgcacc ggctgcactt tcgatcgtca cccaaccgtc
     2641 atcttcagcg aggaacgggg taaggctcga gcggcagccc gtgatccagg tgcgggatgc
     2701 gggagggaac gcggttgccc gggggggtat ccaagtctcg gcggcgatcg gggccggttc
     2761 aggcgacctc attgggacca ggcaacgaat caccgatccg accgggcaag caacctttac
     2821 cgatctcgcg atcactgggt ccagcggcac gcacacgctg gtcttctcgt ccagcggcta
     2881 cgccagcgcc acttccaacg gaatcgatgt ccgggccatc tcgaccatca ccacgatatt
     2941 gacggacaca ccggacccgt ccatctccgg cgcagcggta accgtgggat tccaggtgac
     3001 ctcggaaggc ccgacgccga ctgggagcgt cacggtgacg gcgtccgacg gcgcagccag
     3061 ctgcatcggc agcttgattg gaggcagcgg tagctgcctg atcacgctcg gcaacacggg
     3121 agataggatc ttgacggcta cttactccgg ggcgccggga ctcaatccga gctcgggaac
     3181 cgagccccac cgggtgaacg ccgtggcgcc gccaaaccag gcgccacacg cggacttcag
     3241 ttctcactgt gaggggctca cctgtcagtt taccgacacc agcagcgacc cggatgggca
     3301 ggtcaccggg tggagttgga gcttcggcga cggaagccct tcctcgagtg acaggaatcc
     3361 gtcacacaca tatgccggat ccggcacctt caccgtgatg cttacggcca ccgacaatgg
     3421 cggagcgacc aacgccactt cggctgaagt gaaggtcaac gctccgcaca cgaacaaggc
     3481 gccccaagcg gagtttgagg tccactgcac ggacctgacg tgcacattta cggacaagag
     3541 caaggacggt gacggcaata tcgcgagttg gcattgggac tttggcgacg gccagagctc
     3601 aagcgaccaa aatccgtcgc atttgtatgg aacggccggc tcctaccacg taacgctcac
     3661 cgtaacggac aatgaggggg ctcccgatag tgagacccgc gacgcaaacc caaccgcgcc
     3721 acctaaccag ccacctacgg cagagtttac ctggagttgc gccggactgg actgcagctt
     3781 tactgacggc agcagcgaca gcgacggcac catcgccggc tggagctggg agttcgatga
     3841 tggcaccagt tcgaccagcc agagcccatc gcactcctac ctggcgggtg gaacctatca
     3901 cgtgaagctc accgtgaccg ataactttgg cgccggagaa tcagtgcagc acgacgtaac
     3961 ggtgacccca ccgccaccgc cgaaccaggc acccagcgcc gtgcccgaca attattccac
     4021 tcctcaggat gtagcgctga cggttgtgac acccggcgtg ctcactaacg acacggaccc
     4081 ggatggtgac cctctcaccg ctcagctctc cggctccacg gcgaacggca cagtctcact
     4141 ccagggcgac ggctctttca cctacacacc caacgcaggg ttcaccggag acgactcctt
     4201 cagctatacc gccagtgacg ggtctctcac cagcactgcg acagtgacca tcaccgtcaa
     4261 cgctccctag cggctcggct cccgcaccat cgacatctac gggaccggcg ccctcgacca
     4321 cgagcgccac tcggtggacg cttgccgcag ccctacgagc cgtgtagtat cacgcttcca
     4381 ttcgggcgat tagctcagct ggttagagcg cgcgcctcac atgcgcgagg tcgggggttc
     4441 gagcccctca tcgcccattc tcagtaccct ccctgatttc cacctggttg atcccccgca
     4501 gccaagttgg cccattccaa ccccttgcag agttggatat ttgggaaaac attccagagg
     4561 tttttaacca tggggattcc attcctgatg ttggaagagc tttctgaggt tctgacagct
     4621 gaagacccca ccgcgtgtga cctcctgacc tacgcagcgg gcaggggaca ccgtgatttc
     4681 ccttgtcttt cgcggaccga aaacccctcg agctgcattc cggcgctgga cttctcgcct
     4741 tggttgcggg agcgggttcg ccgggaggat atcgagggtc tgggcgagta tctctggcgg
     4801 gtgcggcggg ccaatcctgg gctcgatggc aacgagcagg tgcaccggcg ttatatcgat
     4861 ctcgcccgag caattatggc ggctccgatc gatcgccacc tgacccgcgg cagcgaagag
     4921 gcgtacgtcg accttcgcgt agctctcttt atgatagggg cacacgaagg gttttgcggc
     4981 ttcatcatgg ccggtgaggc ggccgatttc atggccgcag tcatggcccc gcacagcctc
     5041 tccctggcgg acggccatga gctgttgcat cagcgtaatg cttttgttct cgagatgtcg
     5101 cgggggatgg actactgggc gctctggact ccgcttgcgg ccgatgctct ccggtctccg
     5161 attccgcctc atgatacccg cttccaactg cttctggccg cactcgccaa gctcccgctc
     5221 ggcgctcgag ctcacgccgt ggatgccctg cggcacctga gcgccgatcc gggggccccg
     5281 aggtcgctgt ccagcctctg taggcaggag accaggcggc acggtgtgga ttgcacggag
     5341 tcgtcccggc tgatcgtgga gagcggactg gtgagtccgg cgtcagacat gcagacgtgg
     5401 cttacgggtt gtactcgacg agacctgctc aagctcctgg ccgaggccga ttatcgcgct
     5461 cccaagtcgt ggagcaagga gcggctggca gccgtggcga tgaccgagcg acccgatgcc
     5521 gtgcgcgaga aaatggcgga atcgggtgcc gtggagctcg ccctggatca cgccgaggct
     5581 gctcaccggg tacgggggta tctggaagat gtgaaggaaa cctggcgggt gtggctgggt
     5641 tttggaaccg gagtgataac agaaggttag ataagtcccc ccctccgcag cttcccgatc
     5701 tgatcgaacc gctcctcatg gacggcaagc acttcctcgg gcgtcaccgt cgcgacgcct
     5761 ggcttcccca cctccactcc ggccgcgtaa ttggccagct gcgccgcctc gcggaccgac
     5821 gctcccgcgg ccagcgccgt accgagccag gcagtgaccg tatccccagc acccgagaca
     5881 tcgtagatct gccgcgcaat gctcgggatc tgggtcagtg tcccgtcctt ggtgaccagc
     5941 accattccgt ccgctcccag ggttactagc aggttgtcca ccttgagccg ggtaaggacc
     6001 tccggaagcg catcgccgtt ttggaggtcc acggcggcgc cgagtgcgga ttccagctcc
     6061 cggcggtttg gcttgaagac cgtggcgccg gagtactcga agaattgccg gtacttgggg
     6121 tctaccacga cggggatacc cctgcgcttg gcgacttcca taaccgccac aatgagacct
     6181 ggtggcagcg cccccttgtt gtagtcctcc agcaggagtg cgtcggcatc ggcgagtgct
     6241 gcccgggctg cggcaatcag ccggttgaga tcggcgccgt cgaccagcgt ttccacctcc
     6301 tcgtcgatcc gtacgatctg ctgggagcgg gcaatgatcc tggtcttgga ggtggtgggt
     6361 cgccccgcaa tcgtgacgac gtgccgatcc tccagccgtg ccaccgcaag ctcctgccgg
     6421 atggcggcgc cgtctgcatc gtcgccgacc gcgccgacaa ggaggcactt cgcgcccatg
     6481 gcggcgatgt tggcggctac attggcggca ccgccgagcg ctgcgtggcg ctcgtgcacg
     6541 gtgacgactg gtaccggagc ctcgggcgac agccgctcgg tgtcaccggt gaggtagcgg
     6601 tccagcatga tgtcgccgac caccacgacc cggctgctct tcatgcggtg gatcaaatgg
     6661 agtacgcggt cgcggctgag cggcggcggc gactgtctca tcgaagcacc ccttgccggc
     6721 ggaggcccag cgtcgcctgg atccgcccct cgaatcggtt cacggtgcgg ccctcttcgt
     6781 gtcgccagtt cacgatgtgg tggaggccgg cgttggcctg gacatcaagt ggaccctgtc
     6841 gtccctggat cccgagcccc agccgaaagg tgcgctcgac caccccgatg aagatctggg
     6901 gtgtctgctc ggcctccacc ggggtcgctg ggaagggatc ctcgatgtcc ccctcaccct
     6961 gacgcagcaa ggtgagatcg ggaatagcca gccaacggcc ggccagtggc accgacacac
     7021 tgagcgtcag ctgatccata tccgagaagt ttcgcccgag cccaacccca ttgtcagtaa
     7081 agctctcgaa ccggctgaag gtgcgaaacg cgaggctgga tgcctgggtg taaaaggccc
     7141 gccaggcgag cagcggtccc aagggaccaa acgctgcgat cgtgagcgcc caccggtcgg
     7201 gcaggcggcc cgggtcgctc cggttctggt attgaaagtc gtccaccgca agctgcgctt
     7261 caaagacggt atgtcggaac gcgcgccagt gggcatcgag gccaagtagg acgttgcctt
     7321 tgtcgcccag tccgatggta ttggccagat agctgaaaga aagcgggttc cggtagcgag
     7381 tctcgaagtt ccggtcagcg cccgcaagga cgacgccctc ccagagagcg agagtcaggc
     7441 gccgagatgg gcgggcgtgg aggcggtgca cgaagtagta gcgatggacc gtccggccga
     7501 ggctgtccac ctcatcctgg agatcagtgg caaaggcgga gagccgcagg tctttggttc
     7561 cgatctcgat ccccaatccc tggcgctcgt aggcgtagtt gctcagcgga atgccgggga
     7621 ggcccaccgg tccccagttc cgatccatct gaccataaaa gacgttgccg tacttgaact
     7681 gtgcgctgac gtatgcgtcg gcgatccgtc cggtgaactt tagatccggc cgacctcgcc
     7741 agtctggatc gtcgatcagc cggggctcgg ccacggggcg agtgaccaga acgatgttgc
     7801 cgaacgtgac ccaaccaccc agctcggcat agggcctcac tcgatcggca ccggccggat
     7861 gcaagagatc gcgccgggcg tgggtgtagc cctgaccgcc cgcacgccct tcgatcgccc
     7921 aggcgttccc cgcctggtcg gcgaagtcac tgcgcatctt ctggatgaga cgagcggtgg
     7981 aggagctccc gagtgggtcc gcggccgcga gcacctctgc ggcgtcggcc cgccgaaacg
     8041 gacggatcat aggcgaaggg tcctcgatct cacctcgggt gatgagatgc tccagcagcg
     8101 gaagccgggg atcgtctaac gggatataag gagaggcctg agcatatgct cgcgcggggt
     8161 gggttagcac gccggccaga accgccgcga ggaggagtgg gcgcattggt gccggcatcg
     8221 cggcgaaacc taagaggccc tgaggaatat tgtaggggcg tacgctccag tggggtacta
     8281 tcttcttctc gccttacgcc ggcctgcggg ccgcatttcg gcgcccccgg tggcgccgat
     8341 tcgatcagag ccccgagctc gaacgggata tcatgtgatg gccaaacagg acaacctgga
     8401 cccccagact cgggacctcg tgcgctttgc cgccgccatc gcgcagggct acgaacccgc
     8461 gctgcgtgag cgcgccggct cgctacgcct ctcgcaggtg cccgcggcct gggtcgagga
     8521 gctgatcctc cagagtgtgc tgatggtagg gtatcctcgg gcgttggtcg cctttaccat
     8581 gtggcgcaag gccagtgggg cccctgcgcc gaataccgat ccggatcagg actacgggcg
     8641 agcggcggag tggactcgga ggggtgagga gcaatgtgca gtcgtgtacg gtgaaaatta
     8701 ccagaagctg cggcagagtg ttcgggccct tcacccagcc ctcgacagct ggatgatcac
     8761 cgagggatat ggccggacgc tcgcccggcc gagcctcgat ctccgacgac gcgagctctg
     8821 catcgtggcg caaaccgccg tgctcgaaac accccggcag ctccactccc acctccgggg
     8881 cgcccttaac gcgggtgcca cgttcggcca gatcgagggt acgttgtcga tcgtcaaccc
     8941 actgctctcg ttcgatcagt ggaagaaagt caaagagctg tggcgtacgg tgcgtcaggg
     9001 ctggtcaccg ggaaactgat gctcatcgat cgcgcggtgg tacgggtggt cggcgggacc
     9061 ggtggctccg gtgccagctc gtttgcccgg ttcaaataca agcccaaagg tggtcccgat
     9121 ggtggggatg ggggccacgg cgggagcgta tatgtccgag ccgacccgaa cctggccacc
     9181 ctgctcgact accgctatcg caccgtgtgg caagcggacc ggggtgagca cggcaaaggt
     9241 aagacccaga ccggcgggtc ggccgaggat atctatctgc cccttccgcc cggcaccgtg
     9301 gttcgggatg ccgcgaccgg cgatctgatc ggcgaactcc tggacccagg cgataccctg
     9361 atggtggcac gggggggtcg cggcggtcga ggtaacgccc gtttcgcaac atccacccat
     9421 caggcacctc gcgaatggga gccgggcgaa gagggagaag accgccagat cgagctgatc
     9481 ctcaagctca ttgccgacgt agggttggtc ggagagccga acgcgggaaa gagcaccctg
     9541 ctttcggtgg tctccgccgc ccatccgaaa atcgccgact acccattcac caccctcgag
     9601 cccaaccttg gcgtggtgag cctctcggga catcggacct ttgtcatggc cgacattccc
     9661 ggcatcatcg aaggcgccca tgagggaaag ggactcggct tccgctttct tcagcacgtg
     9721 gagcgcaccc gggtgctcgc cttcctggtc ccgcttggtg ccgacgatcc gcaggccacc
     9781 tacgatcggc ttcgaaacga gatccagcag tacagcccca cccttgctga aaagcagcat
     9841 atagtcctgt tgaccaagca ggaccttcag ccgccggacc attcactacc tgagctcaga
     9901 gcgcccgacg cggcaggtgt acgagccatc tccagcgcca cgggccaggg cgtggagcag
     9961 ctgaaagagt atctctggaa gttggtggag gagtccaagg ctaccgaggc cgcagaaacc
    10021 gtcgaggacc tgtaggtgga cgacgaacga ctggcgtacc tgacactgac gcaggtgcct
    10081 ggaatgggca ccagccggct caagactctc ctcaccgcat tcccaaccgc actcggcgcc
    10141 cactcggcgc cgttcgagtt tttgcgcacc ttgcccgggt tttccagcgc tactgcaacg
    10201 gccttgaaag cgaccccgat ggaagtcggc cgcaagatgg cggaggaggc cgatcgactc
    10261 ggcgcgggca tcctcatccc cgaagacgag gtatacccgg cagagctccg gcacatcgcc
    10321 gatcctccgc cggtcctgtt caccctcgga gaccaggcgc tgttcttacg ccccgcagta
    10381 gccatcgtcg gcagccgcga tcactccagt tacggggcgg tcgtctgtcg ctcgattgcc
    10441 ggcgcggcgg ccggtgcggg agtgaccgtg gtcagcggca tggctcgggg actcgatgcg
    10501 gtggcccaga cagcggcact tgatgcgggc ggggtcacga taggtgtgct cggcaacgga
    10561 ctcggagtca tctaccccgc agccaaccgg acactgtacg agcgggtcgc tcgggatgga
    10621 ctgctcgtga ccgagtttcc cccgggagag cgccccagcg ccgggagctt tccgagacgg
    10681 aaccgcttga tcagtggcct gtcacgggtg acggttgtca tcgaggcggc cgcaggatcg
    10741 ggcgcgctga tcacggcagg caccgcactc gatcagggta gggaagtcat ggcggtgccg
    10801 gggaacatca ccagcgcggt ctccttcggc accaaccgtc tgatccgcga cggcgccgca
    10861 ccagtgctcg agccggccga tctgctggag cacttcgccg agctgactgg gtctagaccg
    10921 gcggtcggtg tctttcccca ggctacgcgg gatttaccgg agacgctctc gcccgaggag
    10981 cgggagctgg cggggctcct tagccaggat ccggttcatc ccgatgagct tgctacccgc
    11041 ttcaaccgtc cggttggtga ggtgttgggg ctgctctgcg gcctcgagat cgccggggtt
    11101 gtagagcaga gaccaggcag agttttctgt cgagtgtagc gcgcacacct tgttggaccg
    11161 aagctcttgt gtttgtcgca gcgggctggg ccaaacccct ccggcttcaa gccccgacct
    11221 ccccacccct cgcaccttgc gctcagcctt cggggttccg cccagtccgc tgctccacca
    11281 aagaccgtgg ggggagtggt tgtcatggag cctgccagag gacccgtgcc cgtcccgcct
    11341 gcgctgggtt ggggggtact cctgagcggt aagagcggat ctagattgca ggtatgcacg
    11401 tctacctcca cgtccccttc tgcgcccgcc ggtgcagctt ctgcgacttc gccatcgcgg
    11461 tgcggaagga ggtgccctcg gaggcctacg tctccacggt acttcgcgag tgggcgctct
    11521 ggcaatcgga gccggcatgg caggactcct ccgacattcg ctccatctac tttgggggcg
    11581 gcactccctc ccggatttct ccggacgcaa tcgcccggct gctggaccgc ataagcggtg
    11641 accgctacgt gcgggcggac gccgagatta ccctcgaggc caatcccgac gacgtgaccc
    11701 ccggagccgc cgcggcctgg cgagcagctg gggtgaatcg gatatcactc ggcgtccaat
    11761 cgtttaattc gcgagtactc ggctggatgc accgggttca caccgtcgaa cagatcttcc
    11821 gggccgtaga ggcagtccgc tgtgctggta tcgcggacct ctcggtagac ctgattttcg
    11881 gcctcccgcg agctcaagaa cgcgactggg gcggtgacct ggaccaggcg ttctcgctcg
    11941 agccagagca tgtctcgctc tacggcctca cggtcgaggc ccacacgccg ctgggtcatt
    12001 ggacggctcg aggcgaatcg actcccgttg atgaggagag ctatgccggc gagttcctgg
    12061 tcgcccactc ggcactgacc gcccggggct acgagcacta cgaggtctcc aatgctgcac
    12121 ggccaggccg cagagctcgg cacaactccg cgtactggca aagggccccg ttcatcggac
    12181 tgggtcccgc agctcacagc ggcctgggcc gtgagcgccg ctggaacgtg cgggactggg
    12241 cggcgtacga gcgggtggtc gccgccggga aatcgcccgc ggagggtcgg gaactgctcg
    12301 acgacgcggc tgttgcgctg gaagagctgt atctcggcct ccggacggca gatggactgg
    12361 cgggcaaccg agtaccgccg gcggtccgcc gcaactggga ggcggaaggt tgggccttgc
    12421 ccgggaccga gcgggtcaga ctcagtgccg agggctggct cagactcgat tcgctggtgg
    12481 cttgtatcgc ctagtagcca catctccacc acgcgtcgcg ttcactttgc cccgtcgcgc
    12541 gccgcctcta gatttccacc atgccgatgc cagatcagct gagtgagcgg gagcttcggg
    12601 tgctcgaggc agtcgtgcag acctacatcg agacggccga gcctaccgga agccagacca
    12661 tcgcccggaa gttcgggctt ggcgtctcgc ctgccacgat ccggaacacc atgagcgagc
    12721 tggaggacaa gggctatctc ttccacccac acacctccgc cggcagaatc cccaccgacc
    12781 gcgcctaccg ggtatacgtg gacgcgatca tgcagctctc tcccccgagc cacgagcagc
    12841 aggacacctt gcgtgccgag ctcgtgggga accgaagtgc cgtggaggag atccttcggc
    12901 gggcggcaca ggtgctcggg gtgctgaccc aggagctcgg cgtggcggtg gcgccggcgc
    12961 tcgaccagat ggtcatggag aggctcgagc tggtccaggt gagctccgag cggctgctcc
    13021 tggtgttcaa tctccggagc ggtgtggtcc ggaccatctt cgtcgaggtg ccgggactgc
    13081 taccccaggc gtcggtgcag caggttgccc agatcctcaa cgagcggctt tccggtctca
    13141 cgcttcagga aatccggggg accttgccgg agcggctgcg agacgcgggc ggcaccgccg
    13201 atggcgggga gctgctcaac atcttcatcg cggaaggcga cgggctcttc gatctctcga
    13261 acgaagagaa cgcggtcgtg ctgggcagcg cccagatgct ggcggatcag ccggaattcg
    13321 cctccaagtc gcggatgcgg gatctgctcc ggctcacgga ggggcgggat ctgctcaaac
    13381 aggcgctcga atcgcgccgc caacggggac tctccattac catcggatcg gagaatcccg
    13441 acacccggct gagcgacttc accctggtca cgtcctccta tgaggtcggg gcgctgaagg
    13501 gcgtgatcgg cgtgatgggg ccgacccgca tgccctacga caaaatcatc ggcctggtgg
    13561 agcacaccag ccgcctggtg gaaggactgc tggagtgagc gatttttatg acctgctcgg
    13621 cgtctcccgg gaagcatcgg agaccgagat caagaaggcc taccgcaagc tcgccatgga
    13681 ataccatcca gaccggaatc cttcgcacgg tgctgaagcc cggttcaagg agatcaccga
    13741 ggcctatgag gtactgcgcg acccgcagaa gcgctcggca tatgatcggt acggcaaggc
    13801 gggtgtcgcc ggaggcggct tcgggttcca tcacgtcgat ctcagcgaag cgctcaacat
    13861 cttcatgcgc gacttcgggg ggatgggtgg cttcgaatcg atcttcggcg ggcgtcgggc
    13921 ccgaaccgac gagcgacggg gtcaggatat ccgggtgacc gtccgcctca ccctcagcga
    13981 ggtggcgctc ggagccaaga agacagtcaa gctgaagagc ccggagcgtt gcacctcctg
    14041 ccaggggagc ggcgccaaac ccggcaccaa gacgacccac tgcacgacct gcggtgggac
    14101 tggtgaagtg cgccgggcgg cgcggagcat gttcggccag ttcatctcgg tggcggcgtg
    14161 ccccacctgc ggtggagagg gggtcacggt caaggacccc tgtgaggtct gtcgcggcga
    14221 gggccgggtt cggggtgagc gcacggtcac ggtggacgtt ccggccggcg tctcggccaa
    14281 caactacctc acgctccgag gccagggcgc cgccggtctc cgcaatggtc ccagcggcga
    14341 tctgctggtc atgctcgaca tcaaggagga cgagcgattc gagcggcagg gcaatgacct
    14401 gatctacgac cttccactct cgttttccca ggctgcgctc gggggcgagc acgacgtccc
    14461 cacgccctat ggatccgaat ccctccgcat tccgggagga acccagccgg aaaccgttct
    14521 tcggctccgc ggccggggtc ttcccattct ggggcaggat ggcaaaggcg atctcctggt
    14581 ccgggtgcac atctggacgc ccgagcggct gaccgaggag caggagcgtc tcttccgtga
    14641 gctggccaac cacgagggcg aaccgcccaa gcgcgcgccc ggattctggt ccaagctgaa
    14701 ggaggccctc ggcgcatgac ctggtgggcc atcgacgtcc gcacgtccgc cggccaacgg
    14761 gattcggtcg gtgcctggtt ggtggcacgg accggccagg cagtggagga gcgggacgac
    14821 ggcactctgg tcgcgttcgc gcccgacgag gaggccgccg cggcgctggt ggaagagttg
    14881 gggcgggagg cagccgctcc ggttgcgatc gagccccggc gcatcgagtc caccgattgg
    14941 tccacccgtt ggcgcgaggg cctgggaccc cgaaagctcg gctgtctcac catcatccct
    15001 tcgtggctcc ccgaggcctc ggagccggat cccctcacca tcgtgctcga tccggagacc
    15061 gcgttcggca gcggagaaca cggctcgacc cgcgcggccc tgacgctgct gagccggttg
    15121 ctccggcccg acgaccgggt gctcgatctc ggtagtggga gtggtatcct ggctattgcg
    15181 gcgatcaagc tgggcgccgc gcgggccatt ggtatcgaga tcgaccccga ggcaaacgag
    15241 gtggccgccc gtaatgcggc tcgtaatggc gtctccgacc gcgtcgagtt cctcgagggc
    15301 gacgcggcga ctctcgcgcc gctggtcggt ccggccgatc tcctcctctc caacatcctg
    15361 cgcgcggtca acacggccct cctgccggtc gctgcgagag cactccgtcc gggtggtttc
    15421 gccatattct cgggaatgga gcagcccgag gcagaggaat tccgccggac gctttccgat
    15481 gggggcttca agctggtgca ggaaacgctc gatgccgggt ggtggggggt tgccgctgag
    15541 cgccctcgat gagagtactg attccggcgg gcggccctcc gggcgggtgg gcagcggggg
    15601 atcgggtaag tctggacgac aacgaggtac atcacctccg cgtgcgccga gcgcgggatc
    15661 gggaaatcgt ggagttgttg gatggaaccg gcctcagagg caccggccgt ctgctgcaga
    15721 ccggcaatca atgggcggtc gaggtccaga gcgcggagca ggagtcccga cccgctgaac
    15781 tgatgctcgc ggttgcggca ggtgaccgcg accggttctc ctggatggtg gagaaggcgg
    15841 tcgagctcgg ggtcacccgc atactcccgc tggagactgc ccgcagctcc ggggtggcca
    15901 caggggtcag ggacgcccac ctccggcggc ttcggcggca agcgctcgag gcgaccaagc
    15961 agtgtggggt ggcgtgggca gtgcaggtcg aggagccgct ctcgctggac gacttttgcg
    16021 ggcgtccctt gactggcccg ggttggctgg cggatcgctt gggggctccg ccgcccacgc
    16081 gccttggcgg gagcgcgatg actgtggtaa tcggtcccga gggcgggctc accgacgccg
    16141 agcgcgccgg actcgttgcc gccggttacc tgccgatcgt gctgggcccc tacacccttc
    16201 ggttcgagac ggcagcgctt gctgccgctg tcctggcgac gacggccaga atgcgaggga
    16261 gccatgactg actgcctgtt ctgcaagatc gtggcggacg agatccccgc caagatcgtg
    16321 aagcgcaccg gcgacgcgct ggcctttcgc gacaccgatg ccaaggcgcc ggtgcacgtg
    16381 ctggtgattc ccacccggca catccccgcg gtgcgggacg ccaagggaac cgatggcgaa
    16441 cggctgctcg ggcggttgct caccttcacg gcagaggtgg cgagtgagct cggtctcgat
    16501 ggcgatgggt accgagttgt gacgaacacg gggaagaacg cggggcagag cgtggatcat
    16561 ctccacctcc atattctggg tgggcggaag atgacctggc cgccgggctg atgggttgga
    16621 acggcggaac ggcggtagag cgatgcagct aacgggttag tcatcctgag cggagcgaag
    16681 gatcggccgg gtcactcaac cccaagtatc cctccgcgag gtcaacccac gccggatttt
    16741 cggcctcgat aaggcctagc ttcttgcatc gaagccatcc tttgatctgc ttttccctgg
    16801 cgatggcatc tctcgcgttc ccagtcacct cgacataaac gagacgggta atgctgtaac
    16861 gccgcgcgaa tccggggatc gcgccggtct tatgctcgct ggccgatcct tcgcttc
//
LOCUS       DASYRV010000329         3753 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1374333, whole genome shotgun sequence.
ACCESSION   DASYRV010000329 DASYRV010000000
VERSION     DASYRV010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3753
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1374333"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..455
                     /locus_tag="VGQ24_08670"
     CDS             <1..455
                     /locus_tag="VGQ24_08670"
                     /inference="COORDINATES: protein motif:HMM:NF019903.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEV8454949.1"
                     /translation="AEHIRSSVRELEGCIIKLLLFASLKNREITIELAREALADKIRQ
                     GEESAFAGPATPSIDRVQEVVARRWGVTPEGLRSKARTKTLTIPRQVAMYLARDMLGM
                     QLVEIGQAFGGRDHSTVIHSVDKVERQMMRDRTFKERIEMARQELSAL"
     gene            696..1802
                     /gene="dnaN"
                     /locus_tag="VGQ24_08675"
     CDS             696..1802
                     /gene="dnaN"
                     /locus_tag="VGQ24_08675"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEV8454950.1"
                     /translation="MKFTITREQLQEGLTAVAAAIPAKTTLPVLSNVMMEATKQGLRL
                     SGTDLDIAVSTTVAADVDTEGAVTIPAKKLSDIVRELPSAAIRFTGAGEQRVGIECGR
                     SRFKLLGLPREEFPSFPAVKFDKAWQASAGVVHKLVAHVAFAASTEESRPILNGVLWE
                     LRPDRMRMVATNGHRLAKMDVPASGGSTADLIVPPKALEQIRRLFGPEDALEVAKSDN
                     HIGFRAGTKLVYSRLIEGPYPNYEQVIPRENDKTATVDKAAMSAALRRTSVVASDQTH
                     RIRLAFSGGLVKFSVQTPDLGEAQDELAVTYDGEPLEIGFNATYLLEILKYMPTDEVQ
                     LTFKAPERAATIEPVGWNDPASYLALVMPLRLVD"
     gene            complement(1799..2683)
                     /locus_tag="VGQ24_08680"
     CDS             complement(1799..2683)
                     /locus_tag="VGQ24_08680"
                     /inference="COORDINATES: protein motif:HMM:NF013106.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008955 - peptidoglycan
                     glycosyltransferase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic peptidoglycan transglycosylase"
                     /protein_id="HEV8454951.1"
                     /translation="MPIGEKRKTVRRVALGLVAAALIWLFGVWPPPVWWRSHWPERTA
                     MMRLRGDTAGYQPTGLDAMSPILQRMVIIGEDSRFRTHHGLDFEEIRDALGLQPGVSV
                     GGTLRALWARRDRLRGASTITQQLAKNLYLSPTRNPFRKLKEAVTALRLELTLPKDRI
                     MELYLNIVELGPGVWGMPQASAKYFGSRPGGLTEDEAAALAATLPFPLSSNPAYRSGR
                     MLHRRDLILARYHGVPVFIPPDEELLDSLPVPVLVPPVVTPVIDSLMDSVLVTPPESV
                     SDTASDSVKDTVQDSVPD"
     gene            2753..>3753
                     /locus_tag="VGQ24_08685"
     CDS             2753..>3753
                     /locus_tag="VGQ24_08685"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEV8454952.1"
                     /translation="MDIAGLQQRLQAALGKQFTVGPLLGQGGFAVVFRARDHTLNRDV
                     AVKVMDTAGAPSPMLADRFVREAQTIARLEHPHIVPIYEVGQTADLLYIMMRCVDGPS
                     LRQLLGSSPNHRLGVRDAARVARQVADALAYAHADGVVHRDVKPDNILLDKRGHVMVT
                     DFGIAKAAQAATAAQLTTEGMILGTPQYMSPEQATGDPVDGRSDIYSLGIVLYQMLTG
                     GPPFDGDSSAKIIAMQISAQPPDVRRIRGDISPQLAAVLARMLAKDPATRYQTASEAS
                     SAVVDALPTAARDRVRPLRERLPSIALKSLVGLSAAGCLTTVAFLAGAAVVFWFVLSR
                     "
BASE COUNT          683 a         1230 c         1242 g          598 t
ORIGIN      
        1 tcgccgagca catccgctcg agcgtgcgcg agctggaggg gtgcatcatc aagctgctgc
       61 tgttcgcatc cctcaagaac cgtgaaataa cgatcgagct ggcccgcgaa gcgctggccg
      121 acaagatccg gcagggcgaa gagagcgcgt tcgccggccc cgccacgccc agcattgacc
      181 gggtccagga ggtagtggcg cggcgctggg gggtgacgcc cgaagggctg cggtccaagg
      241 cgaggaccaa gacgctgacg atcccgcggc aggtggcgat gtacctcgcc cgcgacatgc
      301 tgggcatgca gctggtggag atcggccagg cgttcggagg ccgggaccat tcgaccgtga
      361 tccacagcgt ggacaaggtc gagcggcaga tgatgcggga ccgcaccttc aaggaacgga
      421 tcgagatggc gcggcaggag ttgtccgcac tgtagccaac attgtcacac ccgccgatgt
      481 gggcggacgg gagaagtcgc gggaaggccc agaatatgtg gaaaggatca gggagcccac
      541 aggtggccca catcagaaaa gccacccaaa gcgtaccggg gctggtagtt tggagatcgg
      601 cccacatttc cccgatccct actactacta ctagttttct attaacagag acgtagtaac
      661 aacttctcca tgtggagtgc tcaggaaccc gaggcatgaa gttcacgatc acgcgggaac
      721 agctccaaga gggcctgacg gcggtggcgg cagccatccc ggcgaagacc acgctaccgg
      781 tgctctccaa cgtcatgatg gaggccacga agcaaggcct gcggctctct ggaaccgacc
      841 tggacatcgc ggtcagcacg acggtagccg ccgacgtcga taccgaaggc gcggtcacga
      901 ttcccgccaa gaagttgagt gacatcgtgc gggaactccc gtcggcggcg atccggttta
      961 cgggcgccgg cgagcagcgc gtagggatcg aatgcgggcg gtcgcgcttc aagctgctcg
     1021 ggctgccgcg cgaggagttt ccgtccttcc ccgccgtcaa gttcgacaag gcctggcagg
     1081 caagcgcggg cgtcgtgcac aagctcgtgg ctcacgtggc attcgccgcc tcaaccgaag
     1141 aaagccggcc gattctcaat ggcgtgctgt gggagctgcg cccggatcgg atgcgcatgg
     1201 tggccaccaa cgggcaccgt ctggccaaga tggatgtccc ggcgagcggt ggctccaccg
     1261 ccgatctgat cgtgccgccc aaggcactgg agcagatccg gcgcctgttc ggaccggagg
     1321 acgccctcga agtcgccaag agcgacaacc acatcggctt ccgcgcgggc accaagctcg
     1381 tctactcacg gctgatcgaa gggccgtatc ccaactacga acaggtcatt ccgcgcgaaa
     1441 acgacaagac ggccacagtc gacaaagcgg ccatgagcgc ggcgctgcgc cgcaccagcg
     1501 tggtggcgag cgaccagacg caccgcatcc gcctggcctt ctcgggcggc ctcgtgaagt
     1561 tctccgtgca gacccccgat ctgggtgagg cgcaggatga gctggcggtg acctacgacg
     1621 gagagccgct cgagatcggc ttcaacgcga cgtatctgct cgagatcctg aagtacatgc
     1681 cgacggatga ggtgcagctg accttcaagg cgccggagcg cgcggcgacg atcgagccgg
     1741 tgggctggaa cgatccggcc agctatctcg ctctggtgat gcccctccgt ctcgtcgact
     1801 agtcgggcac gctgtcctgc acggtgtcct ttacgctgtc gctcgccgta tcggagaccg
     1861 attccggcgg cgtcaccagg acgctgtcca tgagggagtc gatcaccggt gtgacaacgg
     1921 gcggaaccag caccggcacc ggaagcgaat cgagcagctc ctcatccggc ggaatgaaca
     1981 ccggcacccc gtgatagcgc gcgaggatca ggtcgcgccg gtgcagcatg cgtcccgagc
     2041 gatacgcggg attggaggag agcggaaacg gtaacgtcgc ggcgagcgcc gccgcttcgt
     2101 cttccgtaag gcccccgggt cgggatccga agtacttggc gctcgcctgg ggcatccccc
     2161 acacgccggg ccccagctcc acgatgttca agtacagctc catgatgcga tccttcggca
     2221 gggtcagctc gagccgcagc gccgtcaccg cttccttcag cttccggaac ggattgcgtg
     2281 tcggggacaa atagagattc ttggccagct gttgcgtgat ggtgctggct ccacgcagcc
     2341 ggtcacgacg agcccagaga gcgcgcagcg ttccgccaac ggagactccc ggttgcaggc
     2401 cgagcgcatc ccggatctcc tcgaaatcga gcccgtgatg ggtgcggaat cgggaatctt
     2461 cgccgatgat caccatgcgc tggaggatcg gcgacatggc gtcgaggccg gtgggctgat
     2521 atcccgccgt gtcaccgcgc agccgcatca tcgcggtgcg ctccggccaa tgcgaccgcc
     2581 accacaccgg tgggggccac acgccgaaca gccagatcag cgcggcggcg acaaggccta
     2641 acgcgacccg tcggaccgtt ttacgttttt cgccgatggg cattcctgaa aagctcacgg
     2701 ctgtctccgc gcttggccag ggggccggcg cgccccttcc tcccggcatc tgatggacat
     2761 cgcgggccta cagcagcgcc tccaggcggc cctggggaaa cagttcaccg tcggtccgct
     2821 gctcggccag ggcgggttcg cggtcgtgtt tcgcgcccgg gaccacactc tgaaccggga
     2881 cgtggcggtc aaggtgatgg atacggccgg cgccccgtcc cccatgctcg ccgaccggtt
     2941 cgtgcgcgaa gcccagacga tcgcgcgcct cgagcatccg cacatcgtcc ccatttacga
     3001 ggtgggccag accgcggatc tgctctacat catgatgcgg tgcgtcgacg ggcccagcct
     3061 gcggcagctg ctcggctcca gccccaatca caggcttggc gtgcgggatg ccgcccgggt
     3121 cgcccgccag gtggccgacg cgctcgctta tgcccatgcc gatggggtcg tacaccgcga
     3181 cgtgaagccc gacaacatcc tgctcgacaa gcgcgggcat gtgatggtca ccgacttcgg
     3241 catcgccaag gccgcccagg cggccaccgc tgcccagctc accaccgaag gcatgatcct
     3301 cggtaccccg caatacatga gtccggaaca ggcgaccggg gatcccgtgg acggccgatc
     3361 cgatatctac tccctcggga tcgtgctgta tcagatgttg accggcggac ccccgttcga
     3421 tggggattcc tcggccaaga tcatcgccat gcagatctcc gcccagcctc ccgatgtccg
     3481 tcggatacgc ggcgacatca gccctcagct cgcggccgtg ttagcccgga tgctggccaa
     3541 ggatccggcc acccgctatc aaacggcgtc ggaagccagt agcgccgtgg tcgacgccct
     3601 gcccaccgcg gcacgggacc gggtgcggcc cctgcgggag cgtttgccgt cgatcgcgtt
     3661 gaaatcgctc gtgggcctga gcgcggcggg ttgcctcacg acagtggcct tcttggcggg
     3721 agcggcggtg gtgttctggt tcgtgttgag ccg
//
LOCUS       DASYRV010000330         8435 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1582092, whole genome shotgun sequence.
ACCESSION   DASYRV010000330 DASYRV010000000
VERSION     DASYRV010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8435
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1582092"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /locus_tag="VGQ24_08690"
     CDS             complement(<1..363)
                     /locus_tag="VGQ24_08690"
                     /inference="COORDINATES: protein motif:HMM:NF018024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1028 domain-containing protein"
                     /protein_id="HEV8454953.1"
                     /translation="MRGERGKTAAKVLRLTLLRVGATTLCLYQPLTSYLSPLTAQQPP
                     ASPSHFEKLAHTYSIVAYDSATGDLGVAVQSKFPNVGGIVPWGRAGVGAVATQSLGNT
                     AYGERGLDLIAEGASAEEA"
     gene            complement(374..919)
                     /locus_tag="VGQ24_08695"
     CDS             complement(374..919)
                     /locus_tag="VGQ24_08695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454954.1"
                     /translation="MKARLERLFRDNTRSDPRARAAALREALLEAKVGLGTMRDALAA
                     TERELAAERQHLAAAERRGRLAAELPDPETVVLAERFTVRHRERVAVLERKVAVQRDE
                     LVLVEREVAEMLAEYRTARPGNPSESIEAAWRDLEAAGADRPGLGLDGERGPGARDAK
                     LREQAVEAQLAFLKKKFGKQK"
     gene            1141..1551
                     /locus_tag="VGQ24_08700"
     CDS             1141..1551
                     /locus_tag="VGQ24_08700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454955.1"
                     /translation="MALTLRSLLDRLEQLRTRHRRRLIFLAPAMERRRPRIAAEDYAA
                     RHSIEHTLDRKAELRRLAPTWPPAARRYHQLLSYELEGLREVVAALHSVTGGRELEEC
                     LAETSVQIDRLEIEVAWCATLLGKTDQKRALLGQ"
     gene            1553..2197
                     /locus_tag="VGQ24_08705"
     CDS             1553..2197
                     /locus_tag="VGQ24_08705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454956.1"
                     /translation="MDRRRGMLDQQRWLELWSRLGAQGRGASIFARLTAAYAEPGRAY
                     HTAEHIRDCLAELDLTRSLAQHPDEVETALWFHDAVYLPGASDNEDQSAELARTALSV
                     GAVSREVVDRIAALVLATRHAGVPSAPDERLICDIDLSILGREPGIFDAFERRIRREY
                     NWVPEPTYRQERSGVLSGFLRRRSIYQTDLFRHRYEAAARANLERLIAKLGGPH"
     gene            complement(2214..2882)
                     /locus_tag="VGQ24_08710"
     CDS             complement(2214..2882)
                     /locus_tag="VGQ24_08710"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEV8454957.1"
                     /translation="MKRSMLHDTLVHLPAGDITLEGELVVPEQATGVVLFAHGSGSSR
                     HSSRNRFVAGELQAAGLATLLIDLLTPEEEAVDQHTAHLRFDIPLLADRLVAATWWLG
                     QEPSTRALQVGYFGASTGAGAALVAAAAEPDRVGAVVSRGGRPDLAGKALPLVRPPTL
                     VIVGGRDVQVLELNRAAMARMQAETRLEIVPGASHLFEEPGTLEVVARLARDWFLRYL
                     PKKD"
     gene            complement(2895..4238)
                     /locus_tag="VGQ24_08715"
     CDS             complement(2895..4238)
                     /locus_tag="VGQ24_08715"
                     /inference="COORDINATES: protein motif:HMM:NF016994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="erythromycin esterase family protein"
                     /protein_id="HEV8454958.1"
                     /translation="MHHTTTPTLAETIRDAVYPLAGAKDDYDPLLDLIGDARVVLLGE
                     ASHGTHEFYRERARITRRLIVEKGFGAVAVEADWPDAYRVNRWVRGVSDDRTALEALG
                     GFERFPRWMWRNRDVLEFVDWLRGHNESRAEDQRTGFYGLDLYSLFASMEEVVRFLEQ
                     VDPAAASRARYRYSCFDAFGEDTQAYGYAAEFGLTPSCEDQAVQQLVELQRRAAELAQ
                     RDGRILEDEIFYAEQNARLVKNAEEYYRTMFRGRVSSWNLRDRHMAETLEALIAHSDR
                     SGRRTRIVVWEHNSHIGDARATSMGDMGEWNVGQLARERYGDEAVLVGFSTYAGTVTA
                     ASDWEAPAERKRVRPGLPGSFEALFHEVGTSDFLLKLRGDAAVAEVLQDVRLERAIGV
                     IYHPRTERVSHYFEARLPQQFDAVLHFDVTQAVEPLDRTAGWDMGEPPETFPTGL"
     gene            complement(4240..4911)
                     /locus_tag="VGQ24_08720"
     CDS             complement(4240..4911)
                     /locus_tag="VGQ24_08720"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HEV8454959.1"
                     /translation="MMGARFNDRYHAGRRLAAALAPYAGRPNLLVLALPRGGVPVGYE
                     VARALHAPLDLMLVRKLGVPGHEELAMGAIASGGVRVLSEDVVNALGIPDRVIATVAA
                     NEESELARRERAYRDNRPPPDVRGKTVILVDDGLATGSTMRAAAAALQAQHPERLVIA
                     VPVAPRETCQSLLHDADDVVCATVPEPFFAVGNWYEDFSQTTDEEVRELLARANETPE
                     EVPRR"
     gene            5075..5569
                     /locus_tag="VGQ24_08725"
     CDS             5075..5569
                     /locus_tag="VGQ24_08725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454960.1"
                     /translation="MHRCLLVAAILIAACDRSTDGKSSAAAATCGLAALAGPTALLGQ
                     FGVPDQTLGSPPRKLPERLVVRLVAGPAYPAIVGRSDSMLVIGVNGGLPAKVKPGFGV
                     LILDTGSKARGVLLYEGAPVEGAPQLGTVSIDNLSVPLLGIQVDPVKFEDPRCPLFPD
                     SVIL"
     gene            5566..6354
                     /locus_tag="VGQ24_08730"
     CDS             5566..6354
                     /locus_tag="VGQ24_08730"
                     /inference="COORDINATES: protein motif:HMM:NF019342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEV8454961.1"
                     /translation="MSLPRIAVSGVVRTWDDADRTGVNAAYVQMLLASGGVPLILSPL
                     VGPSLAGRALDGVDGLVLTGGEDLDPAWYGADPSPLLSPPSRERDLFELALFAVARQR
                     GLPILGICRGIQLINVGMGGTLFQDLPTERPGAVNHRPEGPRDSRSHRVRLEPGSRVA
                     EALGATTIMVNSSHHQAIKDLAPGLLATGWTDDKLIEAAEAAPDTPWLLAVQWHPEEM
                     HRERQAPERGLFAALVREAGTARDGLVGEKRKEDAIAHAVEGTS"
     gene            complement(6295..6972)
                     /locus_tag="VGQ24_08735"
     CDS             complement(6295..6972)
                     /locus_tag="VGQ24_08735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454962.1"
                     /translation="MIRANTRGRLTGADLQLVILLLSRGSAHRRAYLERRLATEGPDP
                     LLDSPDLLERLLTVRSMLLPSEALFFYVLVRHALRRSGLEERELADYLAALLLEFGQR
                     DRAWRVDWNDDQRHRYLVDILADLETTSGDRRFKVMLHLGNYALWLTGLFPDYIAARR
                     LRKAGPDVSYYDAMGSRGFGLASDHALADHYGLGAVLRTAADRFPALRSALNGVSDRV
                     LFPFFAH"
     gene            6971..>8435
                     /locus_tag="VGQ24_08740"
     CDS             6971..>8435
                     /locus_tag="VGQ24_08740"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEV8454963.1"
                     /translation="MTNPPSTKLTSQPDASADLGLSLVRRLTAFGQEVAGTLRRASVI
                     DLLVRHVRETLAPSEIAVALFQREAETIDFVLGWPPGRSNPRPLLDLATRRGPMLIQD
                     GLDAVLRDAGLTPPPLTAGSWLIAPFVAKGRVTGAIAARGETGRYGPADLVLLEGLLS
                     QASIALESARLIDLHDDGRRTWQEVVDAISPALCIVDRSGAIRRANRAFADLVNAPPA
                     SLIGRPWQAFAPPEWSIDLQRALDQQRAGREVELRTGERTYAVTAVPISSTDRSAVVL
                     LFDDQTERRRLQDQLIQSEKMSAIGQLIAGIAHDLNNPLASVLGFADFLTEVPNVPAN
                     IREPLTVIQEEAERASGIVRNLLGFARKQDHQRRPTALKPLLDGTFVLLRNQLMANRV
                     EAILELEPDLPMPDVDPNQIQQVFVNLINNAAQAIASTGRPGTIAVRARRWLDGVAID
                     VIDDGPGMSEDLAAQVFEPFFTTKAEGEGTGLGLSISQ"
BASE COUNT         1398 a         2860 c         2732 g         1445 t
ORIGIN      
        1 cgcctcctcg gcgctggcgc cctctgcgat caggtcgagc ccccgctcgc catatgcggt
       61 gttgcccaga ctctgcgtcg ccaccgcgcc gacgccggcg cgtccccatg gcacgatccc
      121 gcctacgttc gggaacttcg actgcaccgc gacgccgaga tcgccggtgg cggagtcata
      181 ggcgacgatg ctgtaggtgt gggcgagctt ttcgaagtgg gaaggggatg cgggtggctg
      241 ctgtgcggtg agaggtgaga ggtaagaggt gagcggttgg taaagacaaa gtgttgtcgc
      301 tccgaccctg agaagagtga gtcgcagaac cttggctgcc gttttccccc tctcacctct
      361 cacctctcac ctctcacttt tgtttcccga acttcttctt gagaaacgcc aactgcgctt
      421 ccacggcctg ctcgcgcagc ttcgcatcgc gggcgccggg gcctcgctcc ccatcgagac
      481 cgagcccggg ccggtcggcg ccggccgctt cgagatcgcg ccaggccgcc tcgatcgact
      541 cggacgggtt gcccggacgg gcggtccggt actcggcgag catctcggct acttcacgct
      601 ccactagcac gagctcgtcc cgttgcactg ccaccttccg ttcgagcacc gccacgcgct
      661 cacgatggcg gacggtgaag cgctccgcca gcacgaccgt ttccggatcc ggaagctcgg
      721 cagccaggcg cccccgccgc tcggccgcgg cgagatgctg ccgctcggcc gccagctctc
      781 gctcggtggc cgcgagcgcg tcgcgcatgg ttcccagtcc caccttggcc tcgaggagcg
      841 cttcccggag ggccgccgcc cgggcccgag ggtccgaccg cgtgttgtcg cggaagagcc
      901 gctccagccg cgccttcacg ctctcgaaca cagccggcga gcacgaatca tcatctgccc
      961 ctcggggatg cccggtcctg tgaacggccg ccgggtgacg gatcatcaag cgagatcgaa
     1021 tgttaggact cgattagagg agcgtcaagc gacccgatcc actataccgg ccggccgttt
     1081 cagggtataa tcgatcactc cttttatatc agcgggctct tgtatcggtg gagactgtcg
     1141 gtggcgctca ccctgcgcag cttactggat aggctcgaac agctccgcac cagacaccgg
     1201 cgccgtctga tctttctcgc ccctgcgatg gagcggcgcc gaccgcgcat tgcggccgag
     1261 gactatgctg cccggcactc gatcgagcac accctcgatc gtaaggccga gctacggcgg
     1321 ctggccccca cctggccgcc ggcagctcgc cggtaccacc agctcctctc ctacgagctg
     1381 gagggactcc gtgaggtggt agccgccttg cattccgtca ccggcgggcg cgagctggaa
     1441 gaatgtttgg cagagacctc ggtccagatt gatcgtctgg agatcgaggt cgcctggtgc
     1501 gccacgctgc tcgggaagac cgaccagaag cgggccctgc tcggtcagtg agatggaccg
     1561 gcggcgcggg atgctggacc agcagcgctg gctcgagctt tggtcccgcc tgggagcgca
     1621 ggggaggggc gcctcgatct tcgctcggct gaccgcggcg tacgcggagc ctggacgggc
     1681 gtaccacacg gcggagcaca ttcgcgactg tctggcagag ctggacctta cccggagcct
     1741 cgcacagcac cccgatgagg tagaaacggc gctctggttt cacgacgcgg tgtatctgcc
     1801 gggcgcgtcg gataacgaag accagagcgc ggagctcgcc cgcacggcct tatccgtggg
     1861 cgcagtctcg cgggaagtag tcgaccgcat cgctgcgctg gtgctcgcga ccagacatgc
     1921 cggcgttccc agcgcgcccg acgagcgcct catctgcgac atcgacctgt ccatcctcgg
     1981 acgcgagccc ggaatcttcg atgcgttcga gcggcggatc cggcgcgaat acaattgggt
     2041 acccgagccg acgtatcgcc aggagcgctc gggcgtgctc tctggattcc tccgacgccg
     2101 ctcgatctat caaaccgacc tattccgcca tcgatacgag gcagcggcga gagccaacct
     2161 cgagcgcctg attgcaaagc tcggggggcc gcactaacca cgcccccctc ggtctagtcc
     2221 ttcttcggca agtaccgcag gaaccagtcc cgcgcgagtc gtgcgaccac ctcgagagtc
     2281 cccggctcct cgaacagatg ggaggcaccg ggaacgatct cgagccgagt ctcggcttgc
     2341 atgcgggcca tcgccgcgcg attcagctcg agcacctgga cgtcgcgtcc gccgacgatg
     2401 acgagtgtgg ggggcctcac cagcggcaag gccttgccgg cgagatcggg gcggcccccg
     2461 cgcgagacca ccgcaccgac acgatccggc tcagccgcgg cggccaccag ggcggccccg
     2521 gctccggtgc ttgccccgaa gtacccgacc tgtagcgcac gggtcgatgg ttcctgaccc
     2581 agccaccagg tggccgccac taatcggtca gcgagcagcg ggatatcgaa gcggaggtgc
     2641 gcggtgtgct gatcgaccgc ctcctcctcc ggcgtgagca ggtcgatcag cagcgtggcc
     2701 aggcccgccg cctggagctc gccggcgacg aagcgattcc gggagctatg ccggctgctg
     2761 ccgctgccgt gcgcgaagag gaccacgccg gtggcctgct ccggcaccac cagctctcct
     2821 tcgagcgtga tgtccccggc aggcagatgt accagcgtgt cgtggagcat gctccgcttc
     2881 atcgagttcc tccgctagag accggtgggg aacgtctcgg gcggctcgcc catgtcccag
     2941 cccgcggtgc ggtccagcgg ctcgaccgcc tgggtgacgt cgaagtgcag caccgcatcg
     3001 aactgctgcg gtagccgagc ctcgaagtag tggcttaccc gctcggtgcg cgggtggtag
     3061 atgacgccga tggcgcgctc caacctcacg tcctgcaaca cctcggcgac ggccgcatcc
     3121 ccccgcagct tgagcagaaa gtcggacgtg cccacctcgt gaaagagtgc ctcgaagctc
     3181 ccgggcaggc ccggacgcac gcgctttcgc tcggccggcg cctcccagtc cgaggcggcg
     3241 gtgaccgtgc ctgcgtaggt gctgaatcca actagcaccg cttcgtcacc gtagcgctcc
     3301 cgggcgagct gacccacgtt ccattcgccc atgtcgccca tcgaggtagc ccgggcatcg
     3361 ccgatatgcg agttgtgctc ccagaccacg attctggtcc ggcgcccgct ccggtccgag
     3421 tgggcgatga gggcctccag ggtctccgcc atgtgccggt cacgcaggtt ccaggacgag
     3481 actcttccgc gaaacatggt tcgatagtac tcctcggcgt tcttgaccaa tcgcgcgttc
     3541 tgctcggcat agaagatctc gtcctcgagg atcctgccat cgcgctgggc cagctccgcc
     3601 gcgcgccgct ggagctcgac gagctgctgc actgcctgat cctcgcacga cggggtcagg
     3661 ccgaactccg cggcataccc ataggcctgg gtatcctcac cgaatgcatc aaaacagcta
     3721 tagcgatagc gggcccggct cgccgccgcc ggatcgacct gctcgaggaa gcgcacaact
     3781 tcctccatcg aggcaaagag cgagtagaga tccaaaccat agaagccggt ccgctgatcc
     3841 tcggcccgtg actcgttgtg cccccggagc caatccacaa actccaggac atcccggttg
     3901 cgccacatcc agcgggggaa ccgctcgaac ccgccgagcg cttcgagggc ggtgcggtcg
     3961 tcgctgaccc ctctcaccca gcgattcacc cgatacgcgt cgggccagtc ggcctcgacg
     4021 gcgaccgcgc cgaaaccctt ctccacgatc aacctccggg tgattcgggc ccgctcacgg
     4081 taaaactcgt gcgtgccatg gctggcctcg cccaggagta ccacgcgagc atcgccgatg
     4141 agatcgagca gcggatcgta gtcgtccttt gctcccgcaa ggggatacac ggcgtcccgg
     4201 atcgtctctg ccagcgtggg cgttgtggtg tgatgcatgc tacctccgcg gtacctcctc
     4261 gggcgtctca ttggcccgcg ccagcagctc gcggacctcc tcgtctgtgg tctgggaaaa
     4321 atcctcgtac cagttgccga ccgcgaagaa cggctccggc accgtcgcgc agaccacgtc
     4381 atcggcatca tggagaaggc tttggcaggt ttctcgggga gcaacaggga ccgcgatcac
     4441 gagccgctca gggtgctgcg cctggagcgc cgccgcggcg gcccgcatgg tggagccggt
     4501 ggccagacca tcgtcgacca gaatcacggt cttgccgcgg acgtcgggcg gcggccggtt
     4561 atcccggtag gcccgctcgc gacgggcgag ctcgctctcc tcgttggcgg ctacggttgc
     4621 gatgacgcgg tccggtattc ccaatgcgtt gaccacgtcc tcgctcagca cccgaacccc
     4681 gccggaggca atggcgccca tggccagctc ttcatggccc ggaacaccga gcttgcggac
     4741 caacatcagg tcgaggggtg cgtgcaatgc ccgtgctact tcgtatccga ccggcacgcc
     4801 gccgcgcggc aaggcgagca cgagcaggtt gggccgtccg gcatagggcg ccagcgcggc
     4861 ggcgagccgg cgtccggcat ggtagcggtc gttgaatcgc gcacccatca tcccgacctc
     4921 ctgcatctag caagagatgc ataccgctga ggtaagttgg acgatgtgac tgtgctcaca
     4981 ggaaagggtc tagggtctaa ggtctagacc ctagaccctg gacctagacg agatcccact
     5041 cgctcgctcc ttgtcgtctt ggttatctta ggccatgcac cgctgcctgc ttgttgcggc
     5101 catattgatc gccgcttgcg atcggtccac cgatggcaag agctcggcgg cggcagcgac
     5161 ctgcggactg gccgcactcg ccgggcctac ggcgctcctg gggcagttcg gcgttcccga
     5221 ccagactctc ggctccccgc cccgcaagct tcccgagcgt ctggttgtca ggttggtggc
     5281 aggtcccgcc tatccggcga tcgtgggacg atccgattcg atgttggtaa tcggggtcaa
     5341 tggcggcctg cctgccaagg tgaagccagg ctttggagtg ctgatcctgg ataccggcag
     5401 caaggcgcgc ggggtgctgc tctacgaggg cgcgccggtc gaaggtgccc cccagcttgg
     5461 gacggtctcg atcgataacc tcagcgtacc gcttctgggg atccaggtag accccgtcaa
     5521 gttcgaagat ccgcgctgcc cgctatttcc ggactcggtg atcctgtgag ccttcctcgc
     5581 atcgccgtga gcggggtcgt ccgtacttgg gatgatgccg atcggaccgg tgtgaatgcg
     5641 gcttatgtcc agatgctgct cgcgtccggc ggtgtgccgc tgattctatc cccactggtg
     5701 ggcccatcac tggccggccg cgcgctcgac ggagtagacg gcctcgtcct caccggcggg
     5761 gaagatctgg accctgcctg gtacggcgcg gatccatcgc ccttgctgag cccgccaagc
     5821 cgcgagcgcg atctcttcga gctcgcgttg tttgcggtgg ctcggcagcg gggcctgccg
     5881 atcctcggta tctgccgcgg cattcagctc atcaatgtgg gcatgggcgg cacgctcttt
     5941 caggatcttc cgaccgagcg ccccggagcc gtgaatcatc ggccggaggg tccgcgggac
     6001 tcccgaagcc accgggtgcg gctggagccc ggcagcagag tcgcggaggc acttggcgcc
     6061 acgaccatta tggtgaactc gtctcaccac caggcgatca aagatctcgc gcccggcctg
     6121 ctcgcgaccg gctggaccga cgacaaactg attgaggcag ctgaagccgc acccgacaca
     6181 ccgtggcttc tggcagtgca gtggcatccg gaggagatgc accgcgagcg gcaggcaccc
     6241 gagcgtggct tgtttgcggc gctggttcgt gaggcgggca ctgcccgcga tggtctagtg
     6301 ggcgaaaaaa ggaaagagga cgcgatcgct cacgccgttg agggcacttc gtagtgcggg
     6361 aaagcggtca gccgcggtgc ggagcaccgc accgagaccg taatggtcgg ccagtgcatg
     6421 gtccgatgcg aggccaaagc cgcggcttcc catcgcatcg taatagctga catcgggtcc
     6481 tgctttgcgg aggcgccgag ccgcgatata atcgggaaag agcccagtca gccagagcgc
     6541 gtagttgccg agatgcaaca tgaccttgaa acggcggtcg ccgctggtgg tctcgaggtc
     6601 agccagaata tcgacgagat aacggtgccg ctggtcgtcg ttccagtcga cccgccaggc
     6661 tcggtcgcgc tgcccgaact cgaggagcag tgccgcgaga tagtcagcca gttcccgctc
     6721 ttcgagaccg gagcgcctga gcgcatgccg gacgaggacg tagaagaaga gcgcctcgga
     6781 cgggagcagc attgaacgga ccgtcaggag ccgctcgagc aggtcgggcg agtcgagcaa
     6841 cgggtccggc ccttcggtcg ccagtcgccg ctccaggtac gcccgacggt gggcggaacc
     6901 ccggctcaga agcaggatca ccaactgcag gtccgctccc gtcaggcggc cccgcgtgtt
     6961 tgcacggatc atgaccaacc ctccgtcaac gaagctcacg tcgcaacccg acgcgtctgc
     7021 cgatctgggt ctgtcgctcg tccgtcgtct gaccgccttc ggtcaggagg tggcggggac
     7081 gctccgccgg gcctcggtga tcgacctcct ggtgcgccac gtcagggaga cactcgcgcc
     7141 gagtgagatc gcggtggccc tgtttcagcg tgaggccgaa accatcgact tcgtgctcgg
     7201 ctggcccccg ggccgctcca atccacgccc gctgctcgac cttgccaccc gtcgcggtcc
     7261 aatgctcatc caggatgggc tggacgcggt gctccgggat gcgggtctca cgcctccacc
     7321 tttgacggcc ggcagctggt tgattgcacc ttttgttgct aaaggtagag taaccggggc
     7381 aatagcggcg cgcggtgaga caggtcgcta cggccctgcc gatctggtgc tgctggaagg
     7441 actgttgtct caggccagca ttgccctcga gagtgcccgg ctgatagacc ttcatgacga
     7501 cggccggcga acctggcagg aagtggtcga cgccatttca ccggcgctgt gcatcgttga
     7561 tcggagcggg gcgattcgtc gggccaaccg tgcctttgcc gacttggtca acgccccacc
     7621 ggcaagcttg atcggccggc cctggcaggc cttcgcgccg cccgaatggt ccatcgatct
     7681 ccaacgagcc ctggatcagc aaagagcggg ccgggaggtc gaattgcgca ccggtgagcg
     7741 cacctatgcc gttaccgccg tgccgattag cagcaccgac cgctctgcgg ttgtcctcct
     7801 gttcgacgac cagaccgagc ggcgccgatt gcaagaccag ttgatccagt cggaaaaaat
     7861 gtcggcgatt ggccagctta ttgccggcat tgcccacgac ctgaacaacc ccttggcctc
     7921 ggtgcttggg ttcgccgact tcctgaccga ggttcccaac gtgcctgcca acattcggga
     7981 acctctcacg gtaatccagg aagaggcgga gcgggcatcg ggtatcgtac ggaacctact
     8041 cgggtttgcc cggaagcagg accatcagcg ccgccccacc gccctgaagc cgctgctgga
     8101 cggtaccttc gtcctcctcc gaaaccagct catggcgaac cgggtggaag ccatcctcga
     8161 gctcgagccc gacctcccca tgcccgatgt ggatcccaac cagatccagc aggtcttcgt
     8221 caacctgatc aacaacgcgg cccaggccat cgcctccacc ggacggcctg gtaccatcgc
     8281 ggtgcgggcg cggcgctggc tcgacggcgt cgccatcgac gtgatcgacg acgggcccgg
     8341 catgtcggag gacctggccg cgcaggtatt cgagccgttc ttcaccacca aggcggaggg
     8401 agagggaacc gggctcgggc tctcgatcag ccagg
//
LOCUS       DASYRV010000331         3608 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_692113, whole genome shotgun sequence.
ACCESSION   DASYRV010000331 DASYRV010000000
VERSION     DASYRV010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3608
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_692113"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(206..1027)
                     /locus_tag="VGQ24_08745"
     CDS             complement(206..1027)
                     /locus_tag="VGQ24_08745"
                     /inference="COORDINATES: protein motif:HMM:NF014658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis protein"
                     /protein_id="HEV8454964.1"
                     /translation="MRLGRIPWINCYPVYGAIDRKLVSMPAELVSGTASELNDLLAAG
                     ELQVSAVSAVEYARNAAMYHLLPDLAITCDGPVHSVGLFSKRPVGELTGCTVLLSASS
                     RTSILLLELLCRHRWNIRPRFATVRAEAPDLTTLAALPHEAVLVIGDAALHLSTQSVY
                     PVKIDLGSEWKAWTGLPFVFAVWAARRDGSAAAMRAVHRGLLESRAWGLAHLDELAAD
                     AARNTGVAERVCRAYLGDLDYALSYRHLAGLTDFFRRLAQEDLVPDGSLSFISAA"
     gene            complement(1024..2220)
                     /gene="mqnE"
                     /locus_tag="VGQ24_08750"
     CDS             complement(1024..2220)
                     /gene="mqnE"
                     /locus_tag="VGQ24_08750"
                     /inference="COORDINATES: protein motif:HMM:TIGR03700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminofutalosine synthase MqnE"
                     /protein_id="HEV8454965.1"
                     /translation="MSGGLDLARLRDPLLRPIAEKVTAGERLDPADGLILYATSDLLG
                     LGTLADFANQRRNGDRVFFSANQHINPTNVCILRNTCTFCSFARMPKEDGAYTRSLEE
                     VFHEAEQATGMPTREFHIVGGLHPKLRLSYYTDMIRGLKERHPQVHVKALTAVEIAHL
                     ARIEKLSEREVLIAMKEAGLTSLPGGGAEVFSTAVRATIAERKLTGEEWIRVHRVAHE
                     LGIPTNCTMLYGHVETAEDRIEHLGMLRRLQDETGGFLTYIPLAYHPDHNELGEEMGR
                     VGTATTGYEDLKNIAVGRLFLDNIPHVKTHWPMVTPFLSQIALSFGCNDVEGTVVYER
                     IYHEAGAHTAMHMPYMELVRLIRGAGKCPVERDSLYRPMRENFDHPPPEPLLRRGAAL
                     PVVHAA"
     gene            complement(2507..>3608)
                     /gene="fabF"
                     /locus_tag="VGQ24_08755"
     CDS             complement(2507..>3608)
                     /gene="fabF"
                     /locus_tag="VGQ24_08755"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEV8454966.1"
                     /translation="RFACEVKGFDPLAYLERKEAKRMDLFAQFAMAASHQAVTHAGLE
                     GKFPVPERTGVVIGSGIGGMMTFEEQCLIYLQKGPDRVSPFFVPMFIPDIAPGLVSIR
                     YGLKGPNFATVSACASSAHAIGESFNMIRHGAADAMVTGGSEGAITGLTVAAFANMKA
                     LSTRNDSPETASRPFDKDRDGFVLGDGGAMVVLESLEHAERRGARILGEVLGYGLSAD
                     AYHITSPAESGEGAQRAMKSALEDGRIDITDVGYINAHGTSTPQGDIAETRAVKAVFG
                     DQARKLVFGSTKSMTGHLLGGAGALEFIVSLLASTCGLIPPTINQFTPDPECDLDSAP
                     NRKVERRVDVALSNSFGFGGHNVTLAVRRWEA"
BASE COUNT          672 a         1167 c         1143 g          626 t
ORIGIN      
        1 acgttggtgt agttgatgtt ccggtcgatg atgtaggtaa cgatgttttc cggatgctgc
       61 cgccagcgct cggcgtcggc gagctgcccc agctccagga gcgaggcgtg ttcgtagagc
      121 tcgagatagt ccttgaactc acttgaggta cggtccacaa cgctcatgat atcagcctct
      181 taccgtccac acctctcctc atcccctaag ccgcagagat gaacgacagc gacccgtcgg
      241 gcaccaggtc ctcctgggcc agccggcgga agaaatcggt gaggcccgcc agatggcgat
      301 aggacagggc atagtccagg tcgcccagat aagctcggca caccctttcg gcaacgccgg
      361 tatttcgtgc ggcatcagcg gccagctcgt ccaggtgcgc gagaccccag gcccgtgact
      421 cgagcaggcc ccggtgcacc gctctcatcg ccgcggccga gccgtcccgc cgggcagccc
      481 acactgcaaa gacgaacggg agtcccgtcc aggccttcca ctccgaaccc agatcgattt
      541 tcaccgggta tacggactgg gtcgagaggt ggagtgccgc atcgccgatg acgagcacgg
      601 cctcatgtgg cagcgccgcc agcgtcgtga gatcgggtgc ctctgccctg accgtcgcga
      661 accggggccg gatattccac cgatgccgac agagcagttc cagcaacagg atcgatgtcc
      721 gggatgacgc gctgagcagt acggtgcacc cggtaagctc cccgaccggg cgcttggaga
      781 agagtccgac gctgtgcacc ggcccgtcac aagtgatcgc caggtccggc aacaagtgat
      841 acatggcggc attccgggcg tactcgaccg cagagaccgc gctcacctgg agctcgccgg
      901 ccgcgagcag gtcgttcagc tcggacgccg ttccggagac cagctccgcc ggcatactca
      961 cgagcttccg atcgattgca ccgtagaccg ggtagcagtt gatccagggg attcggccga
     1021 gtctcatgcc gcgtgcacca ccggtagggc cgcaccgcgg cggagcaagg gttcgggcgg
     1081 aggatgatcg aagttttcac gcatcggccg atacagacta tcccgctcga ccggacactt
     1141 ccctgccccc cggatcagac gaacgagctc catgtagggc atgtgcatcg ccgtgtgtgc
     1201 gcctgcctcg tggtagatcc gctcgtacac caccgtgccc tccacgtcgt tacagccgaa
     1261 gctgagcgcg atctgcgata gaaatggcgt caccatgggc cagtgcgtct tcacgtgcgg
     1321 gatgttgtcc aggaagagcc gccccaccgc gatgttcttc agatcttcat agcccgtggt
     1381 agcggtgccg acccgcccca tctcctcgcc cagctcgttg tggtcggggt gataggccag
     1441 cgggatatag gtgaggaatc ctccggtttc gtcctgcaac cgccgcagca tgccgaggtg
     1501 ttcaatccgg tcctcagccg tctccacgtg cccatagagc atagtgcagt tggtcggaat
     1561 gccgagctca tgggccacgc gatgtacccg aatccattcc tctcccgtca gcttgcgctc
     1621 ggcgatggtc gcccgtacag cggtgctgaa cacctccgca ccgccccccg gaaggctggt
     1681 gagccccgcc tccttcatgg cgatgagcac ctcgcgctcg gagagcttct cgattcgggc
     1741 cagatgcgcg atctccaccg cggtgagcgc cttcacatgc acctgcgggt gccgctcctt
     1801 gagcccccgg atcatgtcgg tgtaatagct cagccggagc ttggggtgaa ggccaccgac
     1861 gatgtgaaat tcccttgtcg gcatgcccgt ggcctgctcg gcttcgtgga atacctcctc
     1921 gagcgagcgg gtgtaggccc cgtcttcctt cggcatacgg gcgaaggagc agaaggtgca
     1981 ggtgttccgt aggatgcaga cgttggtggg attgatgtgc tgattggcgg agaagaagac
     2041 ccggtctccg ttccgccgtt ggttggcgaa atcggcaagc gtgcccagac ccaacaggtc
     2101 agaggtcgcg tagaggatca gcccgtccgc gggatcgagg cgttcgcctg cggtcacctt
     2161 ctcggcaatc gggcgcagaa gaggatcgcg taggcgtgcc agatcaagcc caccagacat
     2221 cgaatctcct tgaaatgccg aagttaaagg ccaagaaaaa tttacacccc tcggaataac
     2281 cccaccaccc atcgtagagg ccttccccct gggagcctgc cggcgaaccc atacccacgc
     2341 cgtctgctcc ccaactccca tgagcagccc acaatcagcg gaactgggtg agtccggacg
     2401 gccgagcgta aggctgtggc gaaggaggaa gtcaggcgct cgaagccgga gggactcacc
     2461 cagttccgct ggagcatgaa gccggaggtg tggggtggtt tgtctgctac gcttcccagc
     2521 gccggacggc gagggtcacg ttgtgcccac cgaacccaaa ggagttggag agcgccacgt
     2581 ccactctgcg ctcgaccttc cgattggggg cggagtcgag atcgcattcg ggatcgggag
     2641 tgaactggtt gatggtgggg gggatcagcc cgcaggtcga ggccagtagc gagacgatga
     2701 actcgagggc gccggcacca ccgagcaagt ggccggtcat ggacttggtg gatccgaaga
     2761 cgagcttgcg agcctgatca ccaaacaccg ccttgaccgc ccgggtctcg gcgatgtccc
     2821 cctgcggtgt cgaggtgccg tgggcgttga tgtaacccac atccgtgata tcgatgcgcc
     2881 cgtcttcgag agcgctcttc atcgcccgct gcgcgccctc gcccgactcg gccggcgacg
     2941 taatgtggta cgcatcggcg ctcaggccat agccaagcac ttcaccgaga atccgcgcgc
     3001 cgcgccgctc ggcgtgctcc aggctctcga ggaccaccat ggcaccgccg tcgccaagga
     3061 caaagccatc gcggtcctta tcgaacgggc ggctcgcggt ctcgggcgaa tcattccggg
     3121 ttgagagggc cttcatgttg gcaaaagcgg ccacggtgag gcccgtaata gcgccctccg
     3181 agccgccggt gaccatggcg tcggcggcgc cgtggcggat catgttgaac gactcgccaa
     3241 tcgcatgcgc cgaggaagca cacgccgaca ccgtggcgaa gttgggccct tttagcccat
     3301 agcggatgga gaccaggccg ggagcgatgt cgggaatgaa catcggcacg aagaagggag
     3361 acacccggtc gggacccttc tggaggtaga tcaggcactg ctcctcgaac gtcatcatgc
     3421 cgccgatgcc gctgccgatc accaccccgg tgcgctccgg caccggaaac tttccctcga
     3481 ggccggcgtg ggtcaccgcc tggtgagagg ccgccatggc gaactgggcg aacagatcca
     3541 tccgcttggc ctccttccgc tccaggtagg ccagcgggtc gaagcccttc acctcgcagg
     3601 caaagcgc
//
LOCUS       DASYRV010000332         9997 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1582492, whole genome shotgun sequence.
ACCESSION   DASYRV010000332 DASYRV010000000
VERSION     DASYRV010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9997
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1582492"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1043
                     /gene="aroF"
                     /locus_tag="VGQ24_08760"
     CDS             <1..1043
                     /gene="aroF"
                     /locus_tag="VGQ24_08760"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF006421.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HEV8454967.1"
                     /translation="MLIVMRHGAPEEDVRRVVATIEEMGYQARPMPGKQRTTVGLVGN
                     DGRVDGSRLAALPGVQEIIHVTKPYKQVSREWKPDSTVIRLPGGLTVGGDEVVVMAGP
                     CSVESERQILEAARMVREAGATVLRAGAFKPRSSPYSFQGLGRAGLKFLARAREETGL
                     LIVTEAMDGEGMDWVAEVADIIQIGARNMQNYSLLKHAGRAGKPILLKRGLSATIQEL
                     LLSAEYILAEGNPNVILCERGVRGFDPATRNLFDLSALPVVHGLSHLPIIADPSHGTG
                     HRDMVTPMARAAVAAGADGLLVEVHPSPDRALSDGAQSLYPEQFDRMMKETRLIAEAI
                     GRRVAEPAGIRA"
     gene            1040..1687
                     /locus_tag="VGQ24_08765"
     CDS             1040..1687
                     /locus_tag="VGQ24_08765"
                     /inference="COORDINATES: protein motif:HMM:NF015510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA];
                     GO_process: GO:0044874 - lipoprotein localization to outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HEV8454968.1"
                     /translation="MKPHLVWLLASIATAPLHAQDADAIIGRASKVYRSLGSLQANFV
                     QVIDNPMIDSAESVGTLVQAGPAKLAMRFSDPAGEAIVIDGRHVWVYTPSTVPGQVVR
                     LAVPSGGPVYGYNLLAWLLDRPAERYKASYLRSERLNGRTTDVIELVPAVPDLPFEKA
                     VIWLDRENALPRRLEIHEQSGATRTLSLSQIRVNEQVPERTFTFKVPSGVRVVDQ"
     gene            complement(1650..2561)
                     /locus_tag="VGQ24_08770"
     CDS             complement(1650..2561)
                     /locus_tag="VGQ24_08770"
                     /inference="COORDINATES: protein motif:HMM:NF022188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rossmann-like and DUF2520 domain-containing
                     protein"
                     /protein_id="HEV8454969.1"
                     /translation="MSQPRITIIGAGRMGQGLGLALKRRGYKVMLLNRTSREVIPPLV
                     LHHGSKAEATAEAELILIATPDHAITGVAAELAAERAVTRDQVVLHLSGLLDRNALQP
                     LDQTGAACGSFHPLQSVAEPGTAAERLKGAYAGIEGDERALVAAERLANTLRMVPVRI
                     PAAAKPAYHAAAAFVANYTVALVGVAERIARSAGVPADIAARLYLPLLGGAVANLTAL
                     GPAASLTGAVRRGDVQTVQAHLEALNPEDQELYRTLGRAAVALAREAGLGDAEVKRVD
                     AVLAGEFLGRNVAVGATDRQPEPHSGP"
     gene            complement(2663..4312)
                     /locus_tag="VGQ24_08775"
     CDS             complement(2663..4312)
                     /locus_tag="VGQ24_08775"
                     /inference="COORDINATES: protein motif:HMM:TIGR00225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEV8454970.1"
                     /translation="MKQRWGVIGLVAVISFLSGGWLLQRGVASDGNVYQQARLFDDVL
                     GHVSTYYVDSIGETDLYQKATTGMLEQLKDPYSVLLTGDDYKALTEQTSGNYAGLGIQ
                     IDVRDGWITVVAPLPETPAERAGIETGDQIIEVDGKSTEGWKNDEAVKALRGAAGSKV
                     GVTIRRAGIAEPIKYRLTRAQIHMRSVPPGTLFDSGVGYISLNPVSETSAEELRQEIA
                     AMKAKGMKSLLMDLRGNPGGLLDQGVKVADLFLDSRQEIVSTRGRARGSTKEFYDEAR
                     QAWPDLPIVVLVNDGTASAAEIIAGALQDHDRAVVVGAPTFGKGLVQTLFPLGEGIAL
                     KLTTARWFTPSGRTIQRIAKDEEDQATQAAMAVVADTVLGAPDKESTDSALKERPIFH
                     TDAGRVVRGGGGIVPDLVIRPDTLTVSEREFAKALGGALPQYRDALTSIALEAKKTHG
                     VKSESFKVTPEMRQQVYERLRARDVKVSPSVFNGAGTLIDEQLGYEVARYVFGRPAEF
                     RRRATNDLQMQTAMGLLRKAQTPKDLLSLARTSGSAATAQN"
     gene            complement(4442..5083)
                     /gene="tmk"
                     /locus_tag="VGQ24_08780"
     CDS             complement(4442..5083)
                     /gene="tmk"
                     /locus_tag="VGQ24_08780"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEV8454971.1"
                     /translation="MTGRGFFIVLEGPEGSGKSTLVGPLAERMRASGVDPLVVREPGS
                     TRAAEIARQALLDPEHPVGPLAELFLYLAARADLVQSIIRPALEAGRVVLSDRFALST
                     EAYQMAGRGLDPVLVRAGNQAATGGVRPDLTLILDLAPELGQARQLAAGKRRDRLDRE
                     SVDFHRRVVNFYLAVQGEGVRHLDGRLPPDQLLQAAWTEVRAAAPETFQAPVG"
     gene            complement(5080..5433)
                     /locus_tag="VGQ24_08785"
     CDS             complement(5080..5433)
                     /locus_tag="VGQ24_08785"
                     /inference="COORDINATES: protein motif:HMM:NF017902.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF family regulator"
                     /protein_id="HEV8454972.1"
                     /translation="MIWDKAQDLGRLIGQSAEYQALKRAETSLREDKDTVAKLDLIQT
                     LARKVDQAVSTGQMPDQATAEAYETAVRDLEMSPTGQAYVVARSNFEKLMSRVNQQIS
                     EGMDKGAASSIITLG"
     gene            complement(5430..6284)
                     /gene="prmC"
                     /locus_tag="VGQ24_08790"
     CDS             complement(5430..6284)
                     /gene="prmC"
                     /locus_tag="VGQ24_08790"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: protein motif:HMM:TIGR00536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEV8454973.1"
                     /translation="MPELVTDRRTLILEGTDRLARAGIAEPRHQAVRIWAELNQAEQA
                     VVPLAHALDVDPSGAARYQRAIQRRASGEPLPHVTGWTGFRHLSLRSDRRALIPRPET
                     EGLVELLLQRAQRGRVADVGTGSGCIALSLALEGSFTEVVGVDRSAEALALAAENREL
                     VGARVELVQGDLCAPLRAGMFDALISNPPYLTAAEYASLDPSVRDWEPAVALESGEGG
                     LEATVRLLDEGRGVLRAGGCLALEVDCTRARSAAHLASALGWEDVGIHVDLFGRERYL
                     LARRSNTR"
     gene            complement(6277..7335)
                     /gene="prfA"
                     /locus_tag="VGQ24_08795"
     CDS             complement(6277..7335)
                     /gene="prfA"
                     /locus_tag="VGQ24_08795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEV8454974.1"
                     /translation="MEARLRQALVRAEEVGQALSDPEVARDPGRLRSLGREHTRLAPV
                     VRLAQRLARLQDELEQARELASESDPELVALAKADLSRLPPEISALTAELYELLLPRD
                     PHDDRDAIMEIRAGTGGDEAALFAADLYRMYQRYSERHRLAWEPISVSEGLLGGIKEA
                     IVAVRGEEAYGLLRHESGVHRVQRVPATETQGRIHTSAATVAVLPEAEEVDFKIEPQD
                     LKIDVFRSSGPGGQSVNTTDSAVRITHLPTGLVVSQQDQKSQLQNKIKAMEVLRARLL
                     DRMLAEQEAARARERRSMVGTGDRSAKIRTYNFPQSRITDHRINLSVHNLSDVLNGNL
                     DEMIDALRMTSRQELIDA"
     gene            complement(7339..7563)
                     /gene="rpmE"
                     /locus_tag="VGQ24_08800"
     CDS             complement(7339..7563)
                     /gene="rpmE"
                     /locus_tag="VGQ24_08800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010242421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HEV8454975.1"
                     /translation="MKADLHPTYRKLMVQCACGNQFETRSTAASIHVEVCAQCHPYFT
                     GKQRLMDTAGRVDRFRRRYQTEPAAATPKA"
     gene            7784..8464
                     /locus_tag="VGQ24_08805"
     CDS             7784..8464
                     /locus_tag="VGQ24_08805"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEV8454976.1"
                     /translation="MALSPMEVLRKVPLFSGLAEADLAAFAELTRERSYPKGSVIVFE
                     DDPGDALFLVAAGQVKVVLIAEDGREVILSVLGEGSFFGEMAVIDEEPRSAHVIAMDD
                     SSLLVLRREDFHSRLRSSPEVAISLLKEISRRLRRADEKIGSLVLLDVNGRVAHLLLR
                     MAEDEGGDRITRKLTHHTIAQMIGSSRETVSRTMRNLVERGIIQVTRKDITLKDRRSL
                     MLAARRGA"
     gene            8561..9424
                     /locus_tag="VGQ24_08810"
     CDS             8561..9424
                     /locus_tag="VGQ24_08810"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEV8454977.1"
                     /translation="MAHALTFWGTRGSIPTPGPDTARYGGNTACIGIDGTRDRLVILD
                     AGSGLRPLGHELMKQRSSLTADILLSHTHWDHIQGLPFFKPLSSRGTSVCIYGAAQEG
                     VPLKEILRRQMDPMVFPVPLNALAAALTVVEISEGEFEIDDFRICAFRLRHPGTTLGY
                     RLVPTAGGREVAYVTDNELGAGGSYEVPPDWRDRMVEFVAGADTLIHDAMYPDQIIQA
                     RAGWGHSTPRQAVELAHEARCRRLILFHHEPEHSDDALDLLLADTRQYAASMAPRLTI
                     EAAAEGMKFPL"
     gene            9436..>9997
                     /locus_tag="VGQ24_08815"
     CDS             9436..>9997
                     /locus_tag="VGQ24_08815"
                     /inference="COORDINATES: protein motif:HMM:NF015724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HEV8454978.1"
                     /translation="MRPTALRTLALVAFAAGPVAAQTRQVVIAVLPFEDRGSYGQDKE
                     VFRALALGIPATLVSELSGHSELRLADRNQVAQALQSQGLGPNARLDAATAAKVGKQV
                     GARYAVTGNFADFYGKFRLDARIVDTEDGQIVKVVSNDDPRLQDRADLFRIIQMVAHR
                     VLAETSSGAPRSSNAEPAIIPTEALSQ"
BASE COUNT         1729 a         3331 c         3170 g         1767 t
ORIGIN      
        1 aaatgctaat cgtaatgcgc catggcgcgc cggaagagga cgttcgccgg gtcgtagcca
       61 ccatcgagga gatgggctat caggcgcgcc ccatgccggg gaagcaacgc accacggtcg
      121 gtctcgtagg caacgacggc agggtggatg ggtcccgtct cgccgctctc cccggggtgc
      181 aggaaattat ccacgtcacc aagccctaca agcaggtttc ccgggagtgg aagccggact
      241 cgaccgtgat tcgtctcccc ggtgggctca ccgtgggtgg cgacgaggtc gtggtgatgg
      301 cgggcccctg ctcggtagaa agcgagcggc agatactcga ggcggctcgc atggtgcgtg
      361 aggccggagc caccgtgctt cgagccggcg ccttcaagcc gcgcagctcg ccctactcct
      421 ttcaggggct gggacgtgct ggtctgaagt tcctcgcccg agcccgggaa gagaccggcc
      481 ttctcatcgt caccgaggcg atggatggcg agggcatgga ttgggtggcc gaggtggcgg
      541 acatcatcca gatcggtgcc cggaacatgc agaattactc gctgctgaaa cacgccggcc
      601 gggcggggaa gccgattctc ctcaagcgag gcctctccgc cacgatccag gagctgctgc
      661 tctccgccga gtacatactg gccgagggga atcccaatgt gatcctctgc gagcggggag
      721 tccgcggctt cgacccggcg acgcgcaatc tctttgacct gagcgccctt cccgtcgttc
      781 acggcctctc acatctcccc atcatcgccg atccgagtca tgggaccggc caccgggaca
      841 tggtcactcc gatggcgcgg gccgcggtgg ctgctggtgc ggacgggctc ctggtcgagg
      901 tccaccccag tcccgaccgg gcactgtcgg acggcgccca gagcctctat ccggaacagt
      961 tcgatcgaat gatgaaggag acccggctca ttgccgaggc gatcggccgc cgggtggcgg
     1021 agccagcggg gatccgcgcg tgaagccgca cctcgtctgg ctgctggcat cgatcgccac
     1081 cgccccgctc cacgcccagg acgccgatgc catcatcggg cgcgcgtcca aggtgtaccg
     1141 gtcgctcggc agcttgcagg caaatttcgt tcaggtgatc gacaatccga tgatcgacag
     1201 cgcggagagc gtgggtaccc tggtgcaggc agggccggcc aagctggcga tgcgtttcag
     1261 cgacccggcg ggcgaagcga tcgtcatcga tgggcggcac gtgtgggtct acaccccgag
     1321 cacggtgccc gggcaggtgg ttcgactggc tgtcccgagc gggggtccgg tctacggcta
     1381 caacttgctg gcctggctcc tggaccgccc agcggaacga tacaaggcgt cgtatctccg
     1441 gagtgagcgg ttgaacggcc gtacgaccga cgtgatcgag ctcgtgcccg cggtcccgga
     1501 tcttccattc gaaaaagcag tgatttggct cgaccgggag aacgccctgc cccgccggct
     1561 cgagatccac gagcaatcgg gcgccactcg aactctcagc ttgagtcaga tccgggtcaa
     1621 cgaacaggtg cccgaacgca ccttcacctt caaggtcccg agtggggttc gggttgtcga
     1681 tcagtagcgc caacagcgac gttccgtccg aggaattccc ccgccagaac agcgtcaacc
     1741 cgcttcacct cggcatcccc gagacctgct tcacgcgcca gggcgactgc tgcccgcccg
     1801 agagtgcgat agagctcctg atcctcagga ttcagcgctt ctaagtgggc ctggacggtc
     1861 tgcacgtctc cccgccggac cgcgccggtg agagacgcgg cgggtccgag agcagtcaag
     1921 tttgccaccg ccccaccgag cagcgggaga tagagccggg ccgcaatgtc ggcaggcact
     1981 cccgcggagc gagcgatccg ctcggccact cctaccagcg ccacggtgta gttggcgacg
     2041 aacgccgcgg cggcatgata cgccggcttg gccgcggcag gtattcgcac cgggaccatc
     2101 ctgagcgtgt tggctaaccg ctctgccgcg accagcgccc gctcatcgcc ctcgataccg
     2161 gcgtaggctc ctttcaaacg ctcggcagcg gtacccggct cggcgaccga ctgcagcggg
     2221 tggaaggatc cacatgccgc cccagtctga tccagtggct gcaatgcgtt tcgatcgaga
     2281 agacccgaga ggtggagaac cacctggtcg cgagtgacgg cgcgttccgc ggcaagctcg
     2341 gcggccacgc cggtgatggc atgatcagga gttgctatca gaatgagctc ggcttcagcc
     2401 gtggcctcgg ccttgctccc gtgatgcagt accaggggcg ggatcacctc tcgggatgta
     2461 cgattgagca gcatgacctt gtagccccgc cgcttcagcg ccaatcccag gccctgcccc
     2521 atccggcctg ccccaataat cgtgatacgt ggctgcgaca ccgatgctcc tttaggccaa
     2581 tagctttttt ccaaacgcgc gagcccggcc ggccctcctc aggccgaccg ggctcgctca
     2641 cacgacggtg ctataagcga tcctaattct gggccgtagc ggccgacccg ctggtccggg
     2701 ccaggctcag caggtccttg ggcgtctgcg ccttgcgcaa caaccccatc gcggtctgca
     2761 tctgcaggtc gttcgtcgcc cggcgacgaa actcggccgg acggccaaag acatatcgag
     2821 ccacttcgta gcccaactgt tcatcgatca gggtccccgc tccgttgaag acgctggggc
     2881 tgaccttgac gtcgcgcgcg cggagccgct cgtacacctg ctgccgcatc tcgggcgtca
     2941 ccttgaagga ttcggatttc accccatggg tcttcttggc ctcgagcgcg atcgaggtga
     3001 gcgcatcccg atactgcggg agagcaccgc cgagtgcttt ggcgaactcc cgctcggaca
     3061 ccgtcaacgt gtccggacga atgaccagat ccggcacgat gcccccgccg ccgcgtacca
     3121 cccgcccggc gtcggtatgg aatatcgggc gctccttcag agccgagtcg gtggactctt
     3181 tatcgggggc accgagtacc gtgtcggcca cgaccgccat ggccgcctga gtggcctggt
     3241 cctcttcgtc cttcgcgatg cgctggatag tcctgccgct gggcgtgaac cacctggcgg
     3301 tcgtcaactt caaggcgatt ccctcgccca gggggaacag cgtctggacc aaccccttgc
     3361 cgaaggtggg agcgccaacg accaccgcgc gatcatggtc ctgtagggcg ccggcaatga
     3421 tctcggctgc gctggccgtg ccatcgttca ccagcaccac gatcggaagg tcgggccagg
     3481 cctgccgtgc ttcgtcgtag aactccttgg tcgacccacg agcgcgcccg cgcgtcgaga
     3541 cgatctcctg ccgggaatcc agaaataggt cggccacctt gacgccctgg tcgagcagac
     3601 cgcccgggtt cccccgcagg tccatgagga gcgacttcat ccccttggct ttcatggccg
     3661 cgatttcctg acgcaattcc tcggctgagg tctcgctcac cggattcaaa gagatgtagc
     3721 cgacaccgct gtcgaagagg gtcccaggcg ggacggagcg catgtggatt tgcgcacgcg
     3781 tcagccggta cttgatcggc tcggcgatgc cagcccgccg gatcgtgacg cctaccttgg
     3841 agcccgccgc ccctctcagc gccttcacgg cctcgtcatt cttccaacct tcggtcgact
     3901 tgccgtccac ttcgatgatc tggtcgccgg tctcgatgcc ggcccgctca gccggagttt
     3961 ccggaagcgg cgcgacgacc gtgatccagc cgtctcgaac atcgatctga atgccgagcc
     4021 ccgcgtagtt gcccgaagtc tgctcggtga gcgccttgta gtcgtctccg gtgagcagga
     4081 ccgagtaagg atccttgagc tgctccagca tccctgtggt ggccttctgg tagagatcgg
     4141 tctcgccgat ggaatcgacg tagtacgtac tgacatggcc gaggacgtca tcgaagagcc
     4201 gcgcctgctg gtagacgttg ccatcactgg ccacgcctcg ctgcagcagc cagccgccgc
     4261 tcaggaaaga gatcaccgcc acgagaccga tcacgcccca acgctgcttc atatgttcct
     4321 ccgctcccgc agaatagctg aaatattcgg ttgcagtccc tgacggagat cctcacgtcc
     4381 ggatcggccg aggcgggaga caagctcggc cccgacggct agatcatagc gatatataaa
     4441 cttatccgac cggcgcctgg aaagtttcgg gtgcagcggc gcggacctct gtccatgctg
     4501 cctgcaagag ctggtccggc gggagccttc catctaaatg tcgcactccc tcaccctgaa
     4561 ccgccaggta gaagttcacc acgcggcgat ggaaatccac gctttcccgg tcgagccgat
     4621 cccgccgctt cccggcggcg agctgccgag cctggcccag ctccggggcc aaatccagga
     4681 tcagcgtaag gtccggacga actccgccgg tggcggcctg atttcccgct cgcaccaaca
     4741 ccggatccag cccccggccg gccatctgat aggcttcggt cgaaagcgca aaccggtctg
     4801 agagcaccac ccgccccgcc tccagcgccg ggcgaataat ggactggacc agatcggccc
     4861 tggccgcaag gtagaggaag agctcggcga gagggcctac cggatgctcg ggatcgagca
     4921 aagcctgtcg ggcaatctcg gccgcacggg tgctgccggg ctcccgcacg accagagggt
     4981 ccacgccgct cgcccgcata cgttccgcca gtgggccgac gagcgtggac ttgccggatc
     5041 cctccggccc ctcgagcacg atgaagaagc cgcggccagt catcccagtg taatgatgct
     5101 gctggccgct cccttatcca tgccctcact gatctgctga ttcacccgcg acatgagctt
     5161 ctcgaaattc gagcgtgcca ccacgtaggc ctgtcctgtc ggactcatct ccagatcccg
     5221 caccgcggtc tcataggctt cggccgtcgc ctggtccggc atttggccgg tggagaccgc
     5281 ctggtcgacc ttgcgcgcga gcgtctggat cagatcgagc ttggccacgg tatccttgtc
     5341 ttcccgcagc gaggtctcgg cccgcttgag cgcttgatat tccgccgact ggccgatgag
     5401 acggcccagg tcctgcgcct tatcccagat caccgtgtgt tgctcctccg cgcgagcagg
     5461 tagcgctcgc gaccgaatag gtccacatga atccccacat cttcccaccc gagcgcagag
     5521 gcgaggtgag cggctgaacg ggctctggta caatcgacct caagagcgag gcatccgccc
     5581 gcccgcagta cgcctcgtcc ctcgtcgagc aatcgcaccg tcgcctcaag cccgccttcc
     5641 ccactctcca gtgcgactgc cggttcccag tcccgtaccg atgggtcgag gctcgcatac
     5701 tcggccgctg taagatacgg cggattggag atcagcgcgt cgaacatgcc ggcccgaaga
     5761 ggggcgcaga ggtccccctg caccagctcc acccgggcgc caaccagctc gcgattttca
     5821 gcggcgaggg cgagtgcctc ggccgagcgg tcgacgccca cgacttccgt aaagctgccc
     5881 tcgagcgcga ggctcagggc aatgcagccg ctgccggtgc cgacatcggc gacccggccc
     5941 cgttgagccc gctgcagcag cagctcgacc agtccctcgg tctcgggacg cgggatgagc
     6001 gcacgtctat cgctgcgcag cgacaggtgc ctgaacccgg tccagccggt cacatggggc
     6061 agtggctcgc cggaggcccg gcgttggatt gcacgctggt accgcgcggc tcctgaaggg
     6121 tccacgtcga gagcatgagc gagtggcaca actgcctgct cggcctggtt gagctcggcc
     6181 cagatccgga ccgcctggtg gcggggctcc gcgatgccgg ctcgcgccag ccggtcggta
     6241 ccctccagga tcagcgtgcg ccggtcggta accagttcag gcatcgatca gctcctggcg
     6301 gctggtcatc cgcagcgcat cgatcatctc atccaggttg ccgttcaata cgtctgacag
     6361 attgtgcacc gacaggttga tccggtggtc ggtgatgcgg ctctggggaa agttgtaggt
     6421 gcggatcttg gccgaacggt cgccggttcc caccatcgat cgccgctccc gggcgcgggc
     6481 cgcctcctgc tccgccagca tccggtcgag taagcgagcg cgaagcactt ccattgcctt
     6541 gatcttgttc tgaagctggg atttctgatc ctgctggctg accacgaggc cggtcggcag
     6601 gtgggtgatg cggacggcgc tatccgtggt gttgacgctc tgccctccag gaccagacga
     6661 gcggaatacg tcgatcttga ggtcctgcgg ctcgatcttg aagtccactt cttcggcctc
     6721 cgggagcacc gctaccgttg cggcggacgt gtggatccgg ccctgcgttt cggtggcggg
     6781 aacccgctgg acccggtgca cgcctgactc gtgccgcagg aggccgtagg cctcctcccc
     6841 gcggaccgcc acgatcgctt ccttgatccc gccaagcagt ccttcactga ccgagatcgg
     6901 ttcccaggcc aaccggtgcc gttcgctata ccgctggtac atgcggtaga ggtcggccgc
     6961 aaagagggca gcctcgtccc cgccggtacc agcccggatc tccatgatag cgtcgcggtc
     7021 gtcgtgcggg tctcggggga gaagcagctc gtacagctcg gcggtgagag cggagatctc
     7081 tggcgggagc cgcgagaggt cggccttggc gagagccacg agctccgggt ccgattcgct
     7141 cgccagctcc cgcgcctgct ccagctcatc ctgaagccgc gcaaggcgct gggcaagtct
     7201 gacgacggga gcgagccggg tgtgctcgcg gcccagagac ctcagccttc ccgggtctct
     7261 ggccacctcg ggatcggaga gagcctgacc aacctcctcc gcccgcacca gggcctggcg
     7321 gagtcgggcc tccatggatt acgccttggg cgtggcggcc gctggctcgg tctggtacct
     7381 ccggcggaac cggtcaaccc ggccggcggt gtccatcaga cgctgcttgc ccgtgaaata
     7441 aggatggcac tgggcacaca cctcaacgtg aatcgaggcg gctgtcgagc gggtttcgaa
     7501 ctggttgccg caggcacact ggaccatgag cttgcggtag gtcgggtgaa gatcggcctt
     7561 catcggtact cctaagttgg cgctaagccg ttcaatttag ccggtttctg atacttcatg
     7621 caagccggtc taaccgcgta aaccgtgaac agtaaacagt gaacccgcca cacctggttt
     7681 acggttcact gttcaccgtt cacgctttag ctcgaatgat tgacagccca tccaggcgca
     7741 agtatgctac gcccaaacac ttccattacc gagtgaggcg atcgtggcgc tgtccccgat
     7801 ggaggttctg cggaaggttc ccctcttttc aggactggca gaggccgacc tggccgcatt
     7861 cgcggagctg acccgagaac gcagttaccc gaagggcagc gtcatcgtat tcgaggatga
     7921 tccgggcgac gcgctctttt tggtggccgc gggccaggtc aaggtagtgc tcatcgcgga
     7981 ggatggacgg gaggtgatcc tctcggttct gggagaagga agcttcttcg gggagatggc
     8041 ggtcatcgac gaggagcccc gctcggccca cgtgatcgcc atggacgatt ccagcctgct
     8101 cgtgctccgc cgggaggatt tccactcgcg gctcagaagt tcgcctgagg tcgctatctc
     8161 gctgctgaaa gaaatctccc gacggctgcg acgcgccgat gagaaaatcg gcagcctggt
     8221 cctgctcgac gtcaacggac gggtcgccca cctgctgctt cgaatggccg aggatgaggg
     8281 tggcgaccgt attactcgca agctcactca ccataccatc gcccagatga tcggctcgag
     8341 ccgcgaaacg gtttcccgca cgatgcgaaa cctggtcgag cgcggcatca tccaggtcac
     8401 caggaaagac atcaccctga aggaccgtcg ctctctgatg ctggcagccc ggagaggcgc
     8461 gtgatcactg tcacaccccc atagtgactc tgaccgctgc ccgccctgcc aggagcgaaa
     8521 gaggttgcgg gatggccttc cccgcccctg gtgatcccac gtggctcacg cactgacatt
     8581 ctggggaacc cgcggctcca ttcccacacc gggtcccgac acagctcgct acggcggaaa
     8641 cacggcgtgc atcggtattg acggtacccg cgaccgtctg gtcatactcg atgcggggag
     8701 tggcctccgc cccctgggtc atgagctgat gaaacagcgg agctcgctca cggccgacat
     8761 cctgctctct catacgcact gggaccacat tcagggcctg ccgttcttca agccgctcag
     8821 ctcgcggggc acttccgtct gcatctacgg cgctgcccag gagggggtcc ccctcaagga
     8881 gattctgaga cgccagatgg acccgatggt atttccggtc ccgctcaatg cgctggcagc
     8941 cgcgctcacc gtggtcgaga tcagcgaggg cgagttcgag atcgacgact tccggatctg
     9001 tgcatttcgg ctacggcatc ccgggacaac cctgggctac cgtctggtgc ccaccgcggg
     9061 cggtcgtgaa gttgcttacg tgacggacaa cgagctggga gccgggggct cctatgaggt
     9121 gccgccggat tggcgggatc ggatggtcga gttcgtcgcg ggcgccgaca ccctgattca
     9181 cgatgcgatg tacccggatc agatcattca agcgcgcgcc ggctggggcc actcgacgcc
     9241 acgacaggcg gtcgagctgg cacacgaggc gcgatgtcgc cggctgatac tctttcatca
     9301 tgagccggag cacagcgacg acgcgctgga cctcctcctg gcggataccc gccagtatgc
     9361 cgcaagcatg gcgcccaggc tgacgatcga ggcggcggca gaaggaatga agttccctct
     9421 gtgagaggag cgatcatgcg accgaccgca ctccggacgc tggcactcgt ggcgtttgcc
     9481 gcgggaccag tggcggccca gaccaggcag gtcgtcatcg ccgtcctgcc gttcgaggat
     9541 cgcggctctt atggccagga caaggaagta ttccgggcgc tggcgctggg cattcccgcc
     9601 acgctggtca gcgagctgag tggccactcc gagctgcgtc tggccgaccg caatcaggtc
     9661 gcacaggcgc ttcagagcca ggggctgggg ccgaacgcca ggctggatgc cgcgaccgcg
     9721 gccaaggtcg ggaagcaggt cggtgctcgc tatgccgtaa cgggaaactt tgccgacttc
     9781 tatggcaagt tccgcctcga cgccagaatc gtggacaccg aggacggtca gatcgtgaag
     9841 gtggtctcca atgatgatcc cagactccag gaccgcgccg atctgttccg catcatacag
     9901 atggtcgccc accgggttct ggcggagacc agcagcggag ctcctcggag cagcaacgcc
     9961 gagccggcga tcattcctac cgaggccctc agccagt
//
LOCUS       DASYRV010000333         3263 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1375052, whole genome shotgun sequence.
ACCESSION   DASYRV010000333 DASYRV010000000
VERSION     DASYRV010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3263
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1375052"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..485
                     /locus_tag="VGQ24_08820"
     CDS             153..485
                     /locus_tag="VGQ24_08820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454979.1"
                     /translation="MSRCAVRWADGEEIDQGVEGRMDEDLASMSREQLIDEVQKLRRG
                     IRTHRDSTGHELCWHHPALWGLLPEKQDPLPVVPEWPEFIRGCVRYRQSLDEQAPDAP
                     RSSRPYDR"
     gene            complement(550..1155)
                     /locus_tag="VGQ24_08825"
     CDS             complement(550..1155)
                     /locus_tag="VGQ24_08825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454980.1"
                     /translation="MLIAILIGGWNGSTCITVVALLGDGTELLRGASDFNVFYQDDGA
                     LIRGLYSCPQDSCFECERMKIDREGAGGPGELAPALLCMGDRGNQSAGKQKRDQTHMT
                     AWRRTSTPLAHDLALARHTWVRAIRRHPESRHPVISCDKSLSSIPHQKTRSVHRGIRK
                     APERVCFVGQEVRRDEGIFVWPNDLPAEGAMSSAGLDPLHS"
     gene            1335..2087
                     /locus_tag="VGQ24_08830"
     CDS             1335..2087
                     /locus_tag="VGQ24_08830"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEV8454981.1"
                     /translation="MRRAQTIGFGVAGGLALAAGAALWSAPEWLIDQLARRYPGCLYR
                     VPTQAPLVALTIDDGPDPSSTPLILAELRRHEARATFFLITERVRGQERLVRTVASEG
                     HELGNHFTRDRASIRLSPSAFEADLLLAHQVLAPYGAVEWARPGSGWYSRAMIDVMRR
                     HGYRCGLGSVYPFDATIPSAAFAARYIMRHTRPGAVVVLHDGGSRGRRTAKVLSEVLP
                     ELRRRGYGVVSLSELVAAARPAHAADSHHGLP"
     gene            2451..>3263
                     /locus_tag="VGQ24_08835"
     CDS             2451..>3263
                     /locus_tag="VGQ24_08835"
                     /inference="COORDINATES: protein motif:HMM:NF012239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEV8454982.1"
                     /translation="MKVYGSNAIRNVAFVGHGASGKTSLVDALAFVSGASRRHGSIKD
                     GTTLTDYSPDEIERKHSINLGLGHAEWLDTKLNLIDTPGYLDYFGEVVSGLHAADAAV
                     VVLSGTGGVEVGTEKVWEVCDQLHLPRVLFVSLMDKEHADFERVFKDVKAHLTPKVVP
                     VEIPVGDGRDFHGIINLFSGHCHYYKKGTKTGEYEVVPIPQEFEALFQQYNDQLTEAV
                     ASTDDVLIERYLGGEEIPRSEFIGAVKKAMQDGAIVPLFCGSGELTYGTRTLL"
BASE COUNT          574 a         1039 c         1060 g          590 t
ORIGIN      
        1 agctcaacct tgcggtcgag ggcgcgggca cggtgtggct cagaaacatc gagctgctga
       61 agacgcccct agcgtcgtga ggtagaagca cgtgcgactg gcgttgtcgg cgacccggta
      121 tccgggctgg accttcgtgt accgccgcta gggtgagccg atgcgcggtc cgttgggcag
      181 acggcgagga gatcgatcag ggcgtggagg gacgcatgga cgaggatctg gcgagcatgt
      241 cacgcgagca actcatcgat gaggtccaga agctccgccg tggcattcgc acccatcgag
      301 acagcacggg ccatgagctc tgctggcatc accccgcgct gtggggcctt cttcccgaga
      361 agcaggatcc cctcccggtc gtaccggaat ggccggaatt catccgggga tgtgtgaggt
      421 accgtcagtc gctggacgaa caagcgcccg acgcgccgcg ctcttctcgg ccatacgatc
      481 gctgagcggc ggcctggggg acgaggctgg gggtcgcgtc taattatggc tggcgagcag
      541 gttcattttt caggaatgga gcggatccaa gccggccgag ctcattgcgc cctctgcggg
      601 gaggtcattc ggccagacga agatgccttc gtcacgcctg acttcctggc cgacgaaaca
      661 gacccgttct ggcgctttgc ggatgcctcg atgcaccgag cgtgttttct ggtgtgggat
      721 cgacgaaagg cttttgtcgc acgatataac cgggtggcgc gactctgggt ggcgccggat
      781 ggctcgcacc cacgtatgac gagcgagggc gagatcgtgc gccagcgggg tggacgtccg
      841 ccgccaggcg gtcatatgcg tctgatccct cttctgcttg ccggcactct ggttgcctct
      901 gtcgcccatg cacaggagcg ctggcgccaa ctctccgggg ccgccagcac cttcgcggtc
      961 gatcttcatt cgctcgcact cgaagcagga atcttgcggg cacgagtaca aacccctgat
     1021 cagggcacca tcgtcctggt agaagacgtt gaagtccgat gcaccgcgga gcagctccgt
     1081 accatcgccc agcagcgcta cgacagtgat acaggtcgac ccgttccagc cgccaatcag
     1141 gatcgcaatc agcaagacgc gccttgggtc gggttcacac ccggcagcca aggacatgcg
     1201 ctgctgtcca gcctgtgccg tctggcacgc gaacggaacc tggtggggag ccacgagcac
     1261 tcgagggcat gagccgttcg cgcgggcgcg ggctcgagga tcagtcgccg ggcgcttcac
     1321 gctgagactc acatatgcga cgggctcaga caatcgggtt tggtgtggca ggaggactcg
     1381 cgcttgcggc cggtgcagcg ctctggagcg caccagagtg gctgatcgac cagcttgccc
     1441 ggcggtatcc gggctgcctc taccgggtgc cgacccaagc gccgctcgtg gcgctgacga
     1501 tcgatgatgg ccccgacccg agctccacgc cgctgattct cgccgagcta cgtcgacacg
     1561 aggcgcgggc gacgttcttc ctgattacag aacgggtacg aggccaggaa cggctcgtgc
     1621 gcacggtcgc ttcggagggc catgagctcg gcaaccattt cacccgggat cgggcgagta
     1681 tccggctgag ccccagcgcc ttcgaggctg atcttctgct ggctcaccag gtgcttgccc
     1741 cttacggcgc cgtcgaatgg gcgcggccgg ggtcgggctg gtactcgcgg gccatgatcg
     1801 acgtcatgag gcggcacggg taccgctgcg ggctgggatc ggtctacccc ttcgacgcca
     1861 ctatcccttc ggccgccttt gcggcccgtt acatcatgcg gcatacccga cccggcgcgg
     1921 tggtggtcct tcacgatggc gggagccggg ggcggcggac cgccaaagtg ctgagcgagg
     1981 tgttgccgga gttgcggcga cgcggctacg gggtggtgtc actgagcgag ttggtggctg
     2041 cagcccgacc cgcgcatgca gccgactcgc accacgggct accgtaggag cgcagctcag
     2101 gacttgtgag atgtcttcgc gaagaatgcc gtgaagactt gctccacctt tttgcttttg
     2161 cacttcgggc actccggacg actccggcca tgctccgcaa gcggctcggc acgatcaaac
     2221 acgttgtggc attcgcgaca gcgatattcg taggtaggca ttgcggctct ccatagtctg
     2281 actttgggcg cagggatggt tcccgcccag ctgtgcctgt cgggatgaga taggcccaag
     2341 ctagcgtgat ggcccgacct cgtccatcgc cgaaggccgt tccccccatt tgacatccgc
     2401 ccttcctccc cccaccttca aaattcaacc catcctagga ggtggaggcc atgaaggtct
     2461 atggctccaa cgccatacgg aacgtggcgt ttgtcgggca cggggccagc ggcaagacat
     2521 cgctcgtcga cgcgctcgca ttcgtgtccg gcgccagccg gcgccacggc tccatcaaag
     2581 acggcaccac gctgacggac tactcccccg acgaaatcga acgcaagcac tccatcaatc
     2641 tgggcctcgg ccacgccgaa tggctcgaca ccaagctcaa cctcatcgac acccctggct
     2701 atctcgacta cttcggcgag gtcgtcagcg gcctgcacgc ggccgatgcc gccgtcgtcg
     2761 tcctcagcgg tacgggaggg gtggaggtgg gtaccgaaaa ggtctgggaa gtctgcgacc
     2821 agctgcactt gccccgggtc ctgttcgtct ccctcatgga caaggagcac gccgacttcg
     2881 agcgggtctt caaggacgtg aaggcccatc tgacacccaa agtcgttccg gtcgagatcc
     2941 cggtcggcga cggccgcgat tttcacggga tcatcaacct cttctccggg cattgccact
     3001 actacaagaa gggaaccaag accggtgagt acgaggtagt acccatcccg caggagttcg
     3061 aggcgctctt tcagcagtac aatgatcagc tgaccgaggc ggtggcctcg accgacgatg
     3121 tcctcatcga gcgctatctc ggcggggaag agatccctcg ctccgagttc atcggggcgg
     3181 tgaagaaggc catgcaggac ggcgccatcg tcccgctttt ctgcggcagc ggcgagctca
     3241 cctacggcac gcgcacgctg ctc
//
LOCUS       DASYRV010000334         2235 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2207781, whole genome shotgun sequence.
ACCESSION   DASYRV010000334 DASYRV010000000
VERSION     DASYRV010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2207781"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..657
                     /locus_tag="VGQ24_08840"
     CDS             <1..657
                     /locus_tag="VGQ24_08840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454983.1"
                     /translation="AGAGPRISLTLRDTPLRTALELLFQQSGLQHAVESAVPNLPVTV
                     NLRDTAFASALRVITRLAGVTYRKEGDVYLISLRQPPAVEPTTAEALVPEQPQLPTEP
                     TVEKIPVLFNSAAIFAFAFRGTVLPTEDQVLSGGGLGGGSGTGLTGGLSGAGGGWGIG
                     GGIGGMNGFGGLNGGLGGVGNGLGGLGSGLGNVGGGLGIGGSGNGSYGNVPVFPRRGR
                     "
     gene            984..1787
                     /locus_tag="VGQ24_08845"
     CDS             984..1787
                     /locus_tag="VGQ24_08845"
                     /inference="COORDINATES: protein motif:HMM:NF019231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEV8454984.1"
                     /translation="MLSSGKGHRGFTLIELLVVIAIIAILAAILFPVFAQARDKARSA
                     SCLSNMQQIGKALMMYAQDYDEKTTWFWNSGAAAAGKDALAGYWYQLLLPYTKNVQVF
                     ICPSVGTRGPATDQPGWPYCSPDQKPYPNLRRCGYGFNFGHVNYGGGDPYFKPSGETK
                     SMAAIGEPTRTLYIADSSLGSRNPDAGWQDIWCPILPHKKKLATQLDVYAKDKSIGVP
                     PNTNIARRHSGGANGVYMDGHARWRPYDAYLELSPEKEVWGHFTSPEPE"
     gene            complement(1894..>2235)
                     /locus_tag="VGQ24_08850"
     CDS             complement(1894..>2235)
                     /locus_tag="VGQ24_08850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454985.1"
                     /translation="SAVLAGHDHDYERLLIQGFPYFVIGTGGANLRTFARVVEGSQRR
                     VEGNYGAVLVTARTDSLSFQFYTRAGELKDSYTMTRSMTPSGDGVRTPRPTGTRAPRQ
                     PVRPKSGAPAR"
BASE COUNT          371 a          733 c          754 g          377 t
ORIGIN      
        1 gcgggcgccg ggccgaggat cagtctgacg ctgcgggaca cgcctctgcg caccgccctg
       61 gagctgctgt tccagcagtc cgggctgcag cacgccgtgg agtcggcggt ccccaatctc
      121 ccagtgactg tgaatcttcg cgacacggcg tttgcgtcgg cgctgcgtgt gatcacgcgg
      181 ctggcgggcg tcacctaccg gaaggagggt gacgtctacc tgatcagcct gcgccagccg
      241 ccggccgtcg agccgacgac cgcggaggca ctggtgcccg agcagcctca gctcccgacc
      301 gagccgaccg tggagaagat tcccgtcctg ttcaacagcg cagcgatctt cgcctttgcc
      361 ttccggggca cggtgctgcc caccgaagac caggtcctga gcggcggtgg cctgggtggc
      421 ggctctggga cgggcctgac cggcgggctc agtggcgcgg gcggtggatg ggggatcggc
      481 ggtggcatcg gggggatgaa tggcttcggc ggactgaacg gtggcctggg cggcgtgggg
      541 aatggcctgg gtggcctggg gagtggcctg ggcaacgtgg gaggaggcct cggcatcggc
      601 ggctccggga acggcagcta tggcaacgtc cccgtgtttc cccgccgggg ccgctagcgg
      661 gacagtccgt caaatccgcg ccacctgctg ggagcgccgg ccaacgccca caggtgccgg
      721 cgagtcgccg gcgctcccat gctcgagctt gccgggcaag ccactgacgt gacgctcatc
      781 gtcggcagcc gagcgtgttt gtcggacttg ctgccagggt agaaacagag aggaatcccc
      841 cctcgaagtc tgtaacagtg tctcggtagg cgacctgaga cttgcccatg gggacaggct
      901 aatcgatcgg gcggaccgaa gttcctgaag ccgggctcga acccgcggaa gcctggctgc
      961 cgccgatcca agggagacgg gccatgttat cctccgggaa aggccatcgt ggcttcacgc
     1021 tgatcgaact cctcgtcgtc attgctatta tcgctatcct ggcagcgatc ctcttcccgg
     1081 tctttgccca ggcgagagac aaagcgcgca gcgcgagctg cttgtccaac atgcagcaga
     1141 tcggcaaagc gctgatgatg tatgcgcagg attacgacga gaagaccacc tggttctgga
     1201 actccggcgc ggcggcggcg ggaaaggacg ccctcgccgg ctactggtac cagctccttc
     1261 tgccctacac gaagaacgtc caggtgttca tctgtccgtc ggtcggcacc cgcgggcccg
     1321 ccacggatca gcccggctgg ccctactgct cgccggatca gaagccgtat ccgaacctgc
     1381 gccgctgtgg ctacggcttt aacttcggcc acgtgaacta tggcggcggc gatccctact
     1441 tcaagccgag cggcgaaacc aagtcgatgg cggccatcgg ggagcccact cgcacgcttt
     1501 acatcgccga ctcgtcactg gggtccagga atcctgatgc cggctggcag gatatctggt
     1561 gtccgatcct gccgcacaag aagaagctgg ctacccaact cgacgtatat gccaaagaca
     1621 agagcatcgg tgtgccgcca aacacgaaca tcgccaggcg tcattccggc ggcgccaacg
     1681 gcgtctacat ggatggtcac gcccggtggc gtccctacga cgcctacctc gagctctcgc
     1741 ccgagaagga ggtctggggc cacttcacct cccccgagcc cgagtgacgg tcggcacgac
     1801 gtccggctgc cggtgccagg cgatcgttag ccgaggccgg atcaccggtg agaggctgca
     1861 ggaagccgga gcggcctcat gccgccggtc tcttcagcgt gcgggcgcgc cggatttcgg
     1921 ccgcacgggc tgccgcggcg cgcgtgtccc cgtcggacgc ggcgttcgca cgccgtcgcc
     1981 gctcggcgtc atcgatcggg tcatcgtgta gctgtccttg agctcccccg cgcgcgtgta
     2041 gaactggaag gagagactgt ctgtcctggc cgttaccagc accgccccgt agttgccttc
     2101 aactcgcctc tggctgcctt cgacaaccct tgcgaaggtt cgcaggttcg cgccccccgt
     2161 gccgatgacg aagtacggaa acccctggat cagaaggcgc tcgtagtcat ggtcatggcc
     2221 ggcgagcacg gcaga
//
LOCUS       DASYRV010000335         3223 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_970218, whole genome shotgun sequence.
ACCESSION   DASYRV010000335 DASYRV010000000
VERSION     DASYRV010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3223
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_970218"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..936
                     /locus_tag="VGQ24_08855"
     CDS             <1..936
                     /locus_tag="VGQ24_08855"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEV8454986.1"
                     /translation="RQIIRLGLYLREQFGVAPGQRVALLSELRPEWLIADLAALGLGA
                     VSVAIDPRLQGDALADALEDTGPSVTFVSGAAQKLLVSLDGRAPRHGRLIALDSAVTS
                     DGVMSLHTLLEMGGTLDTPERAQSYRAEARNLAPDQPAIRHYVQAPGGGWERIDLSQG
                     EIIERLRVGWLGEPAQPGDLAYVSDPTVSLAGRLALYAFLGDGYTTTALAPAAGELSD
                     LAALHPTKIVAPAGLLAEAVRAGESRAEARPGSDGGWLRHATRSAPLGRARRQQRAIR
                     DTLGGRVRWIGSTDPLDSALAERLGGLAVVGPALI"
     gene            969..2828
                     /locus_tag="VGQ24_08860"
     CDS             969..2828
                     /locus_tag="VGQ24_08860"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEV8454987.1"
                     /translation="MNDLLAATIKELANAGWQMFQAVNTRIPEHASIQPEWAPAPLLK
                     TRQRSKPPLGWPRQTDSLCPRCVVEARNAIIRGERDLAELVNGHIGEIKATILEENGR
                     ILMRKTCPEHGTFEDTLSIDPEMHRIVEGRYYGRDFPTKGDELIHRHGSSTIRYGRGA
                     VLTIDLTNRCNMMCNPCFMDANQVGYVHELTLDEVKQILDDSISFKPRRQMSVQYSGG
                     EPTMSPHFLEACRYAKDIGYYGVQAASNGLRFALEPEFAFQAKEAGLDLVYFQFDGVS
                     NVANSHRHISNLFDAKMMAIENLSAAGIDITPVTTVVNTVNDGQVGPIFQFMIDNCDR
                     MSSVSFQPVSFTGRDEGISDEDRRRQRYTISHLAHELQRYSDGRIDPYRDWYPLGAIG
                     GFTWLADHLRGTEVKFGGLSCSCHPNCGSSLFLMANTRTKAWAPVTQFFDMDQFVKDV
                     SLICDTARGHPATLTQVALALLRNFDQRKAPPGLAVSDLLRVFNKKSNGALMGGRKPV
                     SEWKLCWVGGMWFQDLWTYDFRRTEMCVIPYATQEGEISFCAYNTGVGWRQIVENMHM
                     VATTKDWFQERGRHKIYAGNRAMDLPARSLPVMSAPAVGASAGEACGSGCGCH"
BASE COUNT          551 a         1053 c         1083 g          536 t
ORIGIN      
        1 cgccagatca ttcgcctcgg tctctacctg cgggagcagt tcggcgtcgc tcccggacag
       61 cgcgtcgcgc tgctgtcgga gctgcggccc gagtggctga tcgccgatct cgccgccctc
      121 ggcctggggg cggtctcggt ggcgatcgac ccccgactgc aaggggacgc gctggccgac
      181 gcactggagg acaccgggcc cagcgtcacc ttcgtctcgg gcgccgcgca gaaactgctc
      241 gtgagcctcg acggccgggc tccccggcac ggccgattga tcgcgctgga ctccgcggtc
      301 accagcgacg gcgtgatgtc gctccacacc ctgctggaga tgggaggcac gctcgacacg
      361 ccggagcggg cgcagtcgta tcgggccgag gcccgcaacc tcgcgcccga ccagccggcg
      421 atccgccact acgtccaggc cccgggcggc gggtgggagc ggatcgactt gagccagggc
      481 gagatcatcg agcggctccg ggtggggtgg ctgggcgagc cggcccagcc cggcgatctg
      541 gcctatgtca gcgatcccac ggtctcgttg gccggccgtc tcgcgttgta tgcgtttctg
      601 ggagatgggt acaccacgac ggcgctcgct cccgctgctg gcgagctgag cgatctcgct
      661 gcgcttcatc caacaaaaat cgtcgctcct gcggggctgc tggcggaggc ggtccgcgcg
      721 ggcgagtccc gcgcggaagc gcggccgggg agcgacggcg ggtggctgcg ccacgccacg
      781 cggtcggccc cgctcgggcg ggcgcgcagg cagcagcgcg ccatccgtga cactctgggt
      841 ggtcgagttc ggtggatcgg ttctactgac ccgctcgatt ccgcccttgc cgagcggctc
      901 ggcggcctcg ccgtcgtcgg cccggcgcta atctgatcgt ttaatatcgt ttaatgggga
      961 ggtggggtat gaacgacttg ctggcggcca cgatcaagga actcgcgaat gcgggatggc
     1021 agatgttcca agcggtcaac acccgtattc ccgagcacgc gtcgatccag ccggagtggg
     1081 ccccggctcc gttgctcaag acccgccagc ggtcgaagcc gccgctggga tggccccggc
     1141 agacggactc gctctgcccc cggtgcgtgg tggaagcccg gaacgcaatc atccggggcg
     1201 agcgcgacct ggccgagctg gtcaacggcc acatcggcga gatcaaggcc acgatcctgg
     1261 aggagaacgg ccggatcctg atgcggaaga cctgcccgga gcacgggacc tttgaagaca
     1321 cgctctccat cgaccccgag atgcaccgga tcgtcgaggg gcgctactac ggaagggact
     1381 tccccaccaa gggcgacgag ctgatccacc ggcacggctc ctccaccatt cgctacggcc
     1441 gcggcgccgt gctcacgatc gacctcacca accgctgcaa catgatgtgc aatccctgct
     1501 tcatggatgc caaccaggtg gggtacgtgc acgagctcac cctggacgag gtgaaacaga
     1561 tcctggacga ctcgatctcc ttcaagccgc ggcgacagat gtcggtccag tactccggcg
     1621 gcgagcccac gatgtcgccc cacttcctgg aggcctgtcg ctacgccaag gacatcggct
     1681 actacggcgt gcaggccgca tccaacgggc tccggttcgc gctggagccg gagttcgcct
     1741 tccaggccaa ggaggcgggg ctcgacctgg tgtacttcca gttcgacggc gtgagcaatg
     1801 ttgccaacag ccaccgccac atcagcaatc tgttcgacgc caagatgatg gcgatcgaga
     1861 acctgtcggc ggcggggatc gacatcacgc cggtcaccac cgtggtcaac acggtgaacg
     1921 atggccaggt gggaccgatc ttccagttca tgatcgacaa ctgcgaccgg atgagctccg
     1981 tctccttcca gccggtctcg ttcaccggcc gggacgaggg gatcagcgac gaggaccgcc
     2041 ggcggcagcg ctacacgatc tcgcacctag cgcacgagct tcagcgctac tccgacggac
     2101 gaatcgaccc gtaccgcgac tggtaccccc tgggcgcgat cggtggcttc acctggctgg
     2161 cggaccacct gagaggtacc gaggtcaagt tcggcggact ctcctgctcc tgccatccga
     2221 actgcggctc gagcctcttc ctgatggcga acacgcggac caaggcctgg gctcccgtca
     2281 cccagttctt cgacatggat cagtttgtga aggacgtctc cctgatctgc gataccgcgc
     2341 gcggccaccc ggccacgctc acccaggtgg cgctcgcgct gctccggaac ttcgaccagc
     2401 gcaaggcgcc gcccggccta gcggtgagcg acctgctcag ggtcttcaac aagaaatcca
     2461 acggagcgct catggggggt cggaagccgg tgagcgagtg gaagctgtgc tgggttggag
     2521 ggatgtggtt ccaggacctg tggacctacg acttccgccg aaccgagatg tgcgtgattc
     2581 cctacgccac gcaggagggg gagatctcgt tctgcgccta caacaccggg gtgggttggc
     2641 ggcagatcgt ggagaacatg cacatggtgg ccacgaccaa ggactggttc caggagcgag
     2701 gccggcacaa gatctatgcc ggcaatcgtg ccatggatct ccccgcgcgc tcactgccgg
     2761 tgatgagcgc cccggcggtg ggagcgagcg ccggggaagc ttgtggctcc ggctgcggct
     2821 gccactgaca ttcgcgctga tggacatgat gcgtcttaat cgagcgggat caggtggagc
     2881 ggcttctcag ggactcgtat gagccggctg agtgaggcaa aaacgaatca cgagttggta
     2941 tgcctttgaa caaatcaaag taaccgatac tgtagctgcg agtttcgcgt tttcgtactt
     3001 tcgtgctttc gtgttatgca gacttcgtgt gcagtacttg ccctcgtggc tgggttatcc
     3061 gacggatgcg acccgctccg ccaggtgtga acggccccga tccacccagg tcgggcggcc
     3121 gaaatccggc ggcgcgaaat cgggccgggg atgcgacccg gaataggcca taaaagcccg
     3181 ggggtcgcgg agctcgcggg cggctctcag cacccggcgc act
//
LOCUS       DASYRV010000336         3945 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1379086, whole genome shotgun sequence.
ACCESSION   DASYRV010000336 DASYRV010000000
VERSION     DASYRV010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3945)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3945)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3945
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1379086"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..462
                     /locus_tag="VGQ24_08865"
     CDS             <1..462
                     /locus_tag="VGQ24_08865"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEV8454988.1"
                     /translation="ARRAQLDVLESQVADAVGHGARLELGGRRRAGRGYYFEPTVLTR
                     ADHRMTLMREESFGPIIGIQEVGDDDEAVRLMNDTEYGLTAAVYTGDRSRAERILAQV
                     NAGSAYWNCCDRVSPRLPWSGRKHSGLGTTLSVAGIRAFVQPKAWHLRCWF"
     gene            927..1157
                     /locus_tag="VGQ24_08870"
     CDS             927..1157
                     /locus_tag="VGQ24_08870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454989.1"
                     /translation="MRKQDLFLDCLKRTVDVYRLGTLDRYDTVAFMATCIDVHMRQLP
                     ATERANAGVRNPGAVPALELDEPLLTTPSLRE"
     gene            complement(1132..1989)
                     /locus_tag="VGQ24_08875"
     CDS             complement(1132..1989)
                     /locus_tag="VGQ24_08875"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEV8454990.1"
                     /translation="MSNVWLITGASSGIGAGTARAARKAGHRVVATGRNMGKLRDALA
                     DVAGDDLLLERLDVTSEAEAKRAVAAAVARFGRIDVLVNNAGYSLLGNFEEFTTEQIE
                     RQFAPNFWGVVHVMRAVLPIMRRQRSGHIINISSVAGVVGQRAVAAYGASTFAVEGLS
                     LAVAQEVEPFGIKVTVVEPGFFRTGLLDPRSVEWSSGHIEDYGPAGNVAAAWAAYHGQ
                     QPDDPAALGEALVQIASMERPPKVFAAGSDALDAITPVVEARLAELRAHADLSKAAGG
                     AFTPAGSAS"
     gene            complement(2072..3622)
                     /locus_tag="VGQ24_08880"
     CDS             complement(2072..3622)
                     /locus_tag="VGQ24_08880"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family metallopeptidase"
                     /protein_id="HEV8454991.1"
                     /translation="MSPKALEAHISFLADDSLQGRGTGTRGYDIAARYVAACYSGLRL
                     SPAGTRGYMQPVPLRSGRPVEGSSVVFQGQAAAHELRVGRDYVPLPDLLRPKTEVTAP
                     VVFAGFGITAPERAHDDYRTIDARGKIVVVLFGGPASLPATERAHFSALRTKYENAVR
                     HGAVGLLIVWSRDQSAPWEAIVNDLQGGLVGWLDERGEPDGAFPELRAKAVLSDSAAE
                     ALFQGAPRTYADILRAAKGQTMPAFDLPVRATIRTVTEHARIESPNVAGLLRGSDPRL
                     RDEVVIYTAHLDHLGVGTPVKGDSIYNGALDNASGSAALPEVARAFASLPRAPRRSVL
                     FLAVTGEEKGLIGSDYYAQHPTVPIQSIVANLNMDGLALLYPLRQVVPAGAEHSTLDA
                     VVTRVAARAGMELGPDPYPEEVLFVRSDQYSFVRRGVPALYLDVGLKTDSGVDAAARL
                     QEWIRTRYHTPQDDLSQPMDLESGARHAQFNFLVGLEIANVDERPAWKSGDFFGRIFG
                     RDRTVQAR"
BASE COUNT          665 a         1309 c         1343 g          628 t
ORIGIN      
        1 gcgagacgcg cgcagctcga tgtgctcgaa tcccaggtcg ccgacgcggt cgggcacggc
       61 gcgcggctgg agctcggcgg gaggcggcgg gccgggcgcg gctactactt cgagccgacc
      121 gtgctcaccc gcgccgacca ccgcatgacg ctgatgcggg aggagagctt cgggccgatc
      181 atcgggatcc aggaggttgg ggatgacgat gaggcggtgc ggctcatgaa cgataccgaa
      241 tacggactga ccgcagcggt gtacacgggg gaccgctcgc gcgcggagcg catccttgcc
      301 caggtgaacg ccgggagtgc gtactggaac tgctgcgacc gggtgagtcc ccggctgccg
      361 tggtctgggc ggaagcactc cgggctgggc acgacgctgt cagtagcggg gatccgagcg
      421 ttcgtgcagc cgaaggcgtg gcatctgagg tgctggttct aaacggagct gggccaggac
      481 gatcgcctgc tcgacacttg ccgccggagg cagaccgtca tagttgccgc gcatggtacc
      541 ctctcctggc ccgggactgt gcgtcgcagg ccggcctggg gctctcggga gctcaggtct
      601 tgagaggcgg gcctggaccc cgtgagtcgc tggtttacag aaatcgacac agcgcctccg
      661 gtgaaagctc attcacagcc gtcgtcccgc gagattccgc caagctcgag actagccaag
      721 ccggagaccg gtactacccc gccgtccggg ggaacgccgc cgggcgagat cagaccggca
      781 gcatgacggc cgggcaggcg gtcggacggt cggacagtca atcgcagcgt tgatgctgcc
      841 gcggaacggt tgctccactg cgatccgggc acgctggacc gactgaccgc ctgaccgact
      901 gaccgcctga cgagggagga gctcggatgc gaaaacagga tctctttttg gactgcctga
      961 aaaggacggt ggacgtctac cggctcggga cgctcgaccg gtacgatacc gtggcattca
     1021 tggccacctg catcgatgtc cacatgaggc agctcccggc gacggagagg gcgaatgccg
     1081 gggtcaggaa tcctggagcg gtaccggcgc tcgagctgga cgagccgctg ctcacgacgc
     1141 cgagcctgcg ggagtgaacg cgccgcccgc cgccttggag agatcggcgt gggcccggag
     1201 ctccgcgagg cgagcctcca ccaccggcgt gatcgcgtcg agggcgtcgc tccccgcggc
     1261 gaacaccttg ggcgggcgct ccatgctggc aatctggacc agcgcctcgc ccagcgccgc
     1321 cgggtcatca ggctgctgac catggtaagc cgcccacgcg gccgcgacgt tgcccgcggg
     1381 cccgtagtcc tcgatgtgcc cgctactcca ctcgaccgac cgcgggtcga ggaggccggt
     1441 gcggaagaac cccggctcga ccaccgtgac cttgatgccg aacggctcga cctcctgcgc
     1501 gacggcgagc gagagcccct cgacggcgaa cgtgctcgcg ccgtaggccg ccacggcccg
     1561 ttggcccacg acgcccgcga cggaggagat gttgatgatg tgccccgagc gctggcggcg
     1621 catgatcggg agcacggcgc gcatcacgtg cacgacgccc cagaagttcg gcgcgaactg
     1681 ccgctcgatc tgctccgtgg tgaattcctc gaagttgccg agcaggctgt agccggcgtt
     1741 gttgactagg acgtcgatgc ggccgaaccg cgcgacggcg gcagcgacgg cccgcttcgc
     1801 ctcggcctcg ctggtgacgt ccagccgctc gagcaggagg tcgtcgccgg cgacgtccgc
     1861 cagggcgtcg cggagcttcc ccatgttccg gccggtcgcc acgactcggt gccccgcctt
     1921 ccgggcggcc ctggcggtcc cggcgccgat gccgctgctg gctcctgtga tcaaccagac
     1981 gttgctcatc cttcaatcct ctcatccggc ccttgctctg gcctggtagt tgttcgtctg
     2041 cccctagggc aagccggaga ccgcagcgcc gctaacgggc ctgaaccgtc cggtctcgac
     2101 cgaatatccg tccgaagaag tctccagact tccaggccgg cctctcatcg acgttcgcga
     2161 tctcgagccc gacgagaaag ttgaattgtg cgtgacgagc acccgattcg agatccatcg
     2221 gctggctgag atcatcctgc ggggtgtggt aacgagtgcg gatccactcc tggaggcggg
     2281 cggcagcgtc cacaccggaa tcagtcttta agcccacatc caggtagagc gcgggcacgc
     2341 cgcggcgcac aaacgagtac tggtcgctac ggacgaacaa gacctcttcc ggatatggat
     2401 ctggaccgag ctccatccct gctcgggccg ccacccgagt gactactgca tcgagggttg
     2461 agtgctcggc acccgctggc accacctgtc gcaacgggta gagcagcgca agcccatcca
     2521 tgttcagatt ggcgacgata ctctgtattg ggacagtcgg gtgctgggcg taatagtcac
     2581 tcccaatcaa tcccttctcc tcacccgtca ctgccaggaa cagcaccgac cggcggggtg
     2641 cgcgcggcaa actggcgaat gcgcgggcga cctccggcag cgcggcggaa cctgaggcgt
     2701 tgtccaacgc gccgttataa atcgaatcac ccttaaccgg cgtgccgaca ccaaggtggt
     2761 cgaggtgggc ggtatagatc acgacttcgt ctcggaggcg cgggtccgac ccgcgcaaca
     2821 gtccagcgac attcgggctc tcaatgcgcg cgtgctccgt gactgtgcgt atcgtcgcgc
     2881 gtaccgggag atcgaacgcc ggcatcgttt ggcccttagc cgctctaaga atgtcggcgt
     2941 aggtgcgggg cgcgccctgg aagagcgcct cggccgcgga atcggatagt acggccttag
     3001 cccggagctc gggaaacgct ccgtcgggct cgccccgttc gtcgagccag ccgacgagcc
     3061 caccctgcag gtcgttgacg atcgcctccc aaggtgcgct ctggtctcgg ctccaaacga
     3121 tcagaaggcc caccgcaccg tgacgcacgg cgttctcgta cttggttcgc agggcggaga
     3181 agtgggcccg ctctgtcgcc ggtaaggacg ccgggcctcc gaaaagcact accacgatct
     3241 tgcctcgagc atcgatggtc cggtaatcgt cgtgggcccg ctcgggcgcg gtgatgccga
     3301 agcccgcgaa gaccacgggt gcggtcacct ccgtcttcgg tcgcaacagg tccgggagtg
     3361 gcacataatc ccttcccacg cggagctcat gggccgctgc ctgaccctgg aagaccacac
     3421 tgcttccttc gaccgggcgg ccgctgcgga gcgggacggg ctgcatgtac ccccgtgtcc
     3481 ccgccgggct caatcggagc ccggagtaac aggcggcgac gtagcgcgcc gcaatgtcgt
     3541 agcccctggt gccggtgcct cgcccctgga gtgaatcgtc ggccagaaaa ctgatgtggg
     3601 cctcgagtgc cttagggctc acccgcggta gaccggtggg gccgcgcccc gccagggggg
     3661 cctcactgcg gcagggatcg gccgtacccg ccaaggcccc gtcgtcagct cgtggggcac
     3721 gggcacaacc taagcccagg actaaggcca taaccgcgag tgcgccgaag cgggctactg
     3781 gtgcgctcac tccgatcctc ccctgcagac tggttgtgga tagtcgagat ggactcacgg
     3841 ggacccccga taatgccgca gtggcaggcg gtcatgtggg aaacgcggca gtgttcgtga
     3901 gtatgcgagc gggtaccagt ccagtcaaat tgcgcgcgcg agtgc
//
LOCUS       DASYRV010000337         6245 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_549682, whole genome shotgun sequence.
ACCESSION   DASYRV010000337 DASYRV010000000
VERSION     DASYRV010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6245
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_549682"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2089
                     /locus_tag="VGQ24_08885"
     CDS             <1..2089
                     /locus_tag="VGQ24_08885"
                     /inference="COORDINATES: protein motif:HMM:NF020683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="galactose oxidase-like domain-containing
                     protein"
                     /protein_id="HEV8454992.1"
                     /translation="ALSVLRCGSNVEPTTATDIALVAGDGQAGTVGTALASPLVVAVT
                     DANNNAVPGVSVIWQAQGGGNVSSETVKTGSNGQASVTRTLGPTPGPQTTTATVSGLQ
                     GSPITFMATAVEGNPNGGIVITTNPPVAALTSEVFDPAVQPVVVVTVPGGNPAPGEQV
                     TASIASGSGQLEGKTTATTDANGIARFTDLGINGTGDNTIEFTAGTATVSSSPITLSP
                     LPTEAIKGKWGSIIPWDIVPLHISLMPNGKIIAWGKFEAGGTTMAMPRIWDPSTGSPS
                     GAPMIQLDTMLFCAGHTLMPDGRLMVSGGHKADDTGINRTNFFTQDGVWQPAANMAHG
                     RWYPTVTVLPDGRALTMAGRDENGQVVEIPEIWQNDHWVELPGANGLEIPYYPRNFVD
                     PKNGLIFYAGERIVSRWFDPSGLGSWISGPTHIWRFNRDYGTAVMYETGKILYAGGGG
                     HTGWPTPDAKSTTPTATAEKIDLIQPSPTWETAGSMSAPRRHLNSTVLPDGQVLITGG
                     TRGGGFVDINEADAVKTAELWNPKIGPAGQWTTLASASKMRVYHSVSLLLPDGTVLHG
                     ASGDAMAGLVPVPPERNHEIFSPPYLFKSLNGSRPVITSAPASVGYGQTFSVQTPYAA
                     QITDVRWIRLGSVTHAFDAGQRANTLIFSQTATGVDVTAPPDSKSAPPGYYQLFILNR
                     NGVPSVGKVVKIP"
     gene            complement(2095..3108)
                     /locus_tag="VGQ24_08890"
     CDS             complement(2095..3108)
                     /locus_tag="VGQ24_08890"
                     /inference="COORDINATES: protein motif:HMM:NF005495.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEV8454993.1"
                     /translation="MGLKLKRLVDQVIVITGGTSGIGLATAKRAAERGARVVLCSRNE
                     AELRDTVAAIEERGGKARSVVADVANPDDVERLAAAAIEEYGGLDTWVNNAGVSFYGR
                     LAEVAIEDMRQLFEVNFWGTVYGSRAALPRLRINGGALINMGSIASDRAVPLQGAYSA
                     SKHAVKGFTDALRMELEEEKAPISVTLIKPSAIDTPYFQHAKNYMAVNPKPRAPVYAP
                     ELVANAILRAAEYPVRDITIGGGGRLMSAVGTALPRLTDFYMERSMFSSQRSDVPAEH
                     GEGNLYQPSGVGKERGEYQGLVRRSSLYTQTALSPAKALLAAGLGLAVYAGIRSLTDS
                     DDD"
     gene            3257..4534
                     /locus_tag="VGQ24_08895"
     CDS             3257..4534
                     /locus_tag="VGQ24_08895"
                     /inference="COORDINATES: protein motif:HMM:NF016354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF512 domain-containing protein"
                     /protein_id="HEV8454994.1"
                     /translation="MIRVTAVHPDSIASELGLREGTELLSVNGRELEDFLDWEFLTAE
                     EEFLLHVRQPDGEEIEFDIERPLGEPLGVGLEPPRIRRCANRCDFCFVDGLPDGLRDV
                     LYIRDDDYRLSFRYGNFATLTNLKPHDEQRIMEYRLSPLYVSVHATDPTVRRYLLRNP
                     IAPDIIPQLRRFAEHGIEFHTQVVMSPGVNDGAVLRQTLDDLYRFGPAILGCSVVPVG
                     LTEYSKHHLVREPTAQECRAAITLIERQAAIAVAERGLHWAFGADELYLRAGVELPPA
                     GIYDGFDQVENGVGSVRWLQQRIEAESSKLHGWQGKRIGVVTGTAMSQLMPMVLERLA
                     GVTGSEFELIPVVNTLFGPSVTTAGLLPGVAMQHALGDRRDLDLVLLPGESVNDDGLF
                     IDNMSLDLLDASVPVEIRLSKDFADALHEPVAA"
     gene            4531..5853
                     /gene="der"
                     /locus_tag="VGQ24_08900"
     CDS             4531..5853
                     /gene="der"
                     /locus_tag="VGQ24_08900"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEV8454995.1"
                     /translation="MSKPTVAIIGRPNVGKSTLFNRLLGGRPAIVSERPGTTRDRHFG
                     DAEWQGRRFWVVDTGGLVPESDESMDRAIRQQVDVALEESDVVLFVVDGREGLNPVDR
                     AIAERLRKAGRPVLVAVNKLDNLETSTEQYAFYSLGFGDPVGVSAGIGKGSGDLLDAV
                     VERLPPYDPAEMEDAINVAVVGRPNVGKSSLVNRLLGEERHLVAPNAGTTRDAIDSVL
                     RFQGKTLNFIDTAGLRRRAKVEDDLEFYSTLRTERAIDRAHVCVLVVDATVGMHNQDL
                     RIATQAWDKGCGLIVLVNKWDLVEEKDANTARAGQDALIAKAPFLRYVPFLYVSALTG
                     QRVRKVLDQIIEVAAGRELRVPTAEVNKVLAALIERNAPPQKPGEEVKLLYASQIGTA
                     PPTLAIVSNRPDEVPESYQRYLAHGFREAWPFAGSPLRLKFTRRGSRR"
     gene            5853..>6245
                     /locus_tag="VGQ24_08905"
     CDS             5853..>6245
                     /locus_tag="VGQ24_08905"
                     /EC_number="2.3.1.275"
                     /inference="COORDINATES: protein motif:HMM:NF014690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043772 - acyl-phosphate
                     glycerol-3-phosphate acyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate acyltransferase"
                     /protein_id="HEV8454996.1"
                     /translation="MLEAALALLASYLLGAIPTSHLVSRLFAKIDLREHGSGNLGATN
                     LYRVLGWKYAIPVALFDIGKGAIPVLIFAPRVTDSQLFALACGVAAILGHVFSVFVGF
                     KGGKGVATAAGVMLGLTPLALVVAAAVWA"
BASE COUNT         1132 a         2016 c         1948 g         1149 t
ORIGIN      
        1 ggctctcagc gtcctccgct gcggctccaa cgtcgagccc accaccgcca ccgacatcgc
       61 cctggttgcc ggcgacggcc aagccggcac cgtcgggacg gccctggcga gcccgctcgt
      121 ggtggcggtc accgatgcca ataacaacgc ggtgcccggt gtcagcgtaa tctggcaagc
      181 acagggcggc ggcaacgtct cgtccgagac ggtgaaaacc ggatcgaacg gtcaagcttc
      241 ggtgacccgc actctcggac cgacaccggg accgcagacc acgaccgcca cggtgtcggg
      301 actccagggc tccccgatca ctttcatggc cacggccgtc gaaggcaatc ctaacggcgg
      361 catcgtcatc acgaccaacc ccccggtcgc ggcactgacc agcgaggtgt tcgatccggc
      421 ggttcagcca gtggtggtgg tcacggtacc cggcggcaac ccggcacccg gcgagcaggt
      481 cactgccagc attgcctcag gcagcggcca actggaaggg aagaccaccg cgacgacgga
      541 cgcgaacggc attgcccgct tcaccgacct cggcatcaat ggcacggggg acaataccat
      601 cgagttcacg gcaggaaccg ccacggtcag ctcctcgccc atcacgctct cgccactgcc
      661 aacggaagcc atcaagggca agtggggctc gattattccg tgggacatcg tgccactgca
      721 cattagcctt atgccgaacg gtaagatcat cgcctgggga aaattcgagg cgggcggaac
      781 caccatggcc atgccgcgga tatgggatcc ctccaccggt tcaccctcgg gggctcccat
      841 gatccagctc gacacgatgc tgttttgtgc ggggcacacg ttgatgccgg acggccgttt
      901 aatggtctcg ggcggccaca aggccgatga tacaggaatt aatcgcacca acttctttac
      961 tcaggacgga gtctggcagc cggctgccaa catggctcac ggccgctggt acccgacagt
     1021 gaccgttttg cccgacggtc gagccctcac catggccggg cgggatgaga atggacaggt
     1081 ggttgagatt cccgagattt ggcaaaatga ccactgggtt gagcttcccg gcgccaacgg
     1141 gctcgaaata ccctattacc cccgcaactt cgtcgatccg aagaatggtc tgatcttcta
     1201 cgccggcgag cggattgtgt ctcggtggtt tgatccgagt gggttaggga gttggatcag
     1261 cgggccgact catatctggc ggttcaaccg ggattacgga accgcggtca tgtacgagac
     1321 agggaagatc ctgtacgctg gcggcggggg tcacaccggc tggcccacgc cggacgcgaa
     1381 atccaccacc ccgactgcta cggcagagaa gatcgacctg atccaaccat cgccaacgtg
     1441 ggagactgcc ggctcgatgt cggctccgcg ccgacacctc aactcgaccg tcctgccgga
     1501 cggccaggtg ctaatcaccg gtggcaccag gggcggaggc ttcgtcgata tcaatgaggc
     1561 agatgcggtg aagacggccg aactctggaa tccaaagatc gggccggccg ggcagtggac
     1621 cacactcgcc agcgccagca agatgcgggt ctaccattcg gtctcgctgc tcctgccgga
     1681 tgggacagta ctccatgggg caagtggtga cgctatggcc gggcttgtac cagtcccgcc
     1741 agagaggaac catgagatct tctcgccgcc gtatctcttt aagagtttga acggctcgcg
     1801 tcccgtgatt acgtcagcgc ccgccagcgt tggctacgga cagaccttct cggttcaaac
     1861 tccgtatgca gcgcagatca ccgatgtgcg ctggatccga ctcggctccg tcacccacgc
     1921 ctttgacgcg gggcagcggg ccaatacctt gatctttagc cagacggcca caggagtcga
     1981 cgtcaccgcg ccgcccgact cgaaatcggc tcctccgggc tattaccagt tattcatatt
     2041 gaatcgaaac ggagtaccct cggttgggaa agtggtcaag attccgtaga ggggtcagtc
     2101 gtcgtccgag tcggtcaggg agcgaatgcc ggcatatacg gccaatccca gccctgccgc
     2161 cagcagcgct ttcgcgggtg aaagcgctgt ctgcgtatat aggctcgagc gcctcaccaa
     2221 tccctgatac tcgccacgct ccttccccac accagagggt tggtacaggt tgccctcgcc
     2281 gtgttccgcc ggcacgtctg aacgctgcga gctgaacatg gatcgctcca tgtaaaaatc
     2341 agtcagccgc ggcagggctg tgcctaccgc cgacatgagc cggccgccgc cgccgatcgt
     2401 gatatcgcgg accgggtact cggccgctcg gaggatggcg tttgccacca gttccggggc
     2461 gtacaccgga gcgcgaggtt tgggattaac ggccatgtag ttcttggcat gctggaagta
     2521 tggggtgtcg atggcggatg gcttgatcag ggtgaccgag atgggcgcct tctcttcctc
     2581 gagctccatg cgcagcgcat ccgtaaaccc cttcaccgcg tgctttgacg cggagtacgc
     2641 gccctgcaag ggcacggctc ggtcggatgc aatactgccc atgttgatca gcgctccacc
     2701 gttgatgcgc aggcgcggga gggcggctcg agagccgtac acggtgcccc agaagttgac
     2761 ctcgaacagt tgtctcatgt cttcgatggc gacttcggcc agcctgccat agaatgacac
     2821 ccccgcgttg ttcacccagg tgtccagccc gccgtactcc tcaatggccg ccgccgccaa
     2881 ccgctccaca tcgtcgggat tggccacatc ggccacgacc gatcgagcct tccccccacg
     2941 ctcctcgatc gcggcaacgg tatcccgcag ctcggcctca ttccgggagc acagcacgac
     3001 ccgcgcaccg cgttccgccg cacgtttcgc ggtagcgagt ccgatcccgc tggtgccgcc
     3061 ggtgatcacg atgacctgat ctaccaggcg tttgagtttg agtcccatca cgacctccct
     3121 gaatgcgtcg cagttgctgg taacatgcga actggcccac cagagcacaa caccacaggg
     3181 agcttgaatc tgaccgggta aaggccgatc tttactggct ttggcttacc aggcgctctt
     3241 tgtcgatggc ggcagcatga tccgagtgac ggcagtacat cccgattcga tcgcgtccga
     3301 gctggggctc agggagggaa ccgagctcct ctcggtgaac gggcgggagc tggaggactt
     3361 tctcgattgg gagtttctca ccgccgagga ggaattcctg ctccacgtgc gtcagcctga
     3421 cggggaagag atcgagttcg atatcgagcg cccgctgggg gagcccctgg gcgtgggtct
     3481 cgagccgccg cgtattcgtc gctgtgccaa tcgctgtgac ttttgcttcg tggacgggct
     3541 acccgacggc ctgcgcgacg tgctctacat cagggacgac gactatcggc tctccttccg
     3601 ctacggcaat ttcgccaccc tcaccaatct gaagccccac gatgagcagc ggatcatgga
     3661 gtaccggctc tcccccctgt acgtctcggt acacgccacc gaccccacgg tgcgccgcta
     3721 tctgctccga aatccaattg ctcccgatat catcccccag ctccgccggt ttgccgagca
     3781 cggcatcgag tttcacaccc aggtcgtgat gtcgcccggc gtcaatgacg gggcggtgct
     3841 gcggcagacc ctcgatgacc tctaccggtt cggacccgcc attctgggat gttcagtcgt
     3901 tcccgtcggt ctcactgagt actccaagca tcatctcgtg cgcgagccca ccgctcagga
     3961 gtgccgggcc gccatcacgc tgatcgagcg gcaggccgcc atcgctgtag ccgagcgagg
     4021 gcttcactgg gccttcgggg ccgacgagct ctatctgcgg gcgggtgtcg agcttccccc
     4081 agccgggatt tacgatggct tcgaccaggt ggagaacggg gtagggtcgg tccgctggtt
     4141 acagcagcgg atcgaggccg agtcgtcgaa gctgcatggg tggcaaggaa agcgaatcgg
     4201 cgtcgtcacc ggcacggcga tgagtcagct gatgccgatg gttctcgagc ggctcgccgg
     4261 cgtcaccggg tcggagttcg agctgatacc ggtggtgaat acccttttcg gaccaagcgt
     4321 caccacggcg ggtctcttgc cgggtgtggc gatgcagcat gccctcggtg accggcgtga
     4381 tctggacctc gtccttctcc cgggtgagtc ggtgaatgac gatggcctct ttatcgacaa
     4441 catgagcctc gatcttctcg acgcctccgt ccccgtcgag atccgcctct ccaaggattt
     4501 cgccgacgcg ctgcacgaac cggttgcggc atgagcaagc ctaccgtcgc gatcatcggg
     4561 cgtcccaatg tcggaaagtc caccctcttc aaccgcctcc tcggcggccg gccggcgatc
     4621 gtctccgagc gtcccggcac gacgcgggac cggcacttcg gtgacgccga gtggcaggga
     4681 cggcggttct gggtcgtcga caccggcgga ttggtgcccg aatcggacga gtcgatggac
     4741 cgggccatcc gccagcaggt cgatgtggcc cttgaggaat ccgatgtcgt gctctttgtg
     4801 gtagacgggc gcgaagggct gaatccggtc gatcgcgcca tcgccgagcg gctgcgcaag
     4861 gccggccgtc cagtgcttgt cgcggtcaac aagctcgaca acctggagac cagcactgag
     4921 cagtatgcgt tctactcact cggctttggc gatccggtcg gggtgagcgc cgggataggg
     4981 aaggggagcg gtgatctcct cgatgctgtc gtcgagcgcc tgccccccta cgacccggcg
     5041 gagatggagg acgccatcaa cgtagcggta gtcggccggc ctaacgtggg caagtcatcc
     5101 ttggtcaacc gcctccttgg cgaggagcgc cacttggtgg cacccaacgc cggcaccacc
     5161 cgcgacgcca tcgactccgt cttgcgcttt cagggcaaaa cactcaactt cattgatact
     5221 gcaggcttac gacgccgggc taaagtagaa gatgatcttg aattctactc caccctgagg
     5281 accgaacgcg cgatcgaccg ggctcacgtc tgcgtgctcg tggtggacgc gacggtcggc
     5341 atgcataacc aggatctccg gattgcgacc caggcctggg acaagggctg cggcctgatc
     5401 gtgttggtga acaagtggga cctggtcgaa gagaaggacg ccaacaccgc gcgagcgggc
     5461 caggacgcgc tcatcgccaa ggcgccgttc ctccgctatg tgcccttcct gtacgtgtcc
     5521 gcactgacgg ggcaacgggt tcgcaaggtg ctcgatcaga tcatcgaagt cgcggcggga
     5581 cgggagctgc gagttcccac cgcggaagtg aacaaggtgc tggccgcgtt gatcgagcga
     5641 aacgcgccgc cccagaaacc gggcgaggag gtcaagctgc tctacgcctc acaaatcgga
     5701 acggctcctc cgacgctggc catcgtgagc aatcggcccg atgaggtgcc ggagtcctac
     5761 cagcgttacc tggcgcatgg cttccgcgag gcctggccgt ttgccgggtc tccgctgcgg
     5821 ctgaagttca cccgacgagg gtctcgccgc tgatgctcga agccgcgctc gcgctgctcg
     5881 cctcctatct tctcggcgcc atcccgacaa gccatctggt cagccgacta ttcgccaaaa
     5941 tcgatctgcg agaacacggt agcggcaacc tcggcgccac gaatctctac cgggtgctgg
     6001 ggtggaagta cgcaatcccg gtcgccctgt tcgatatcgg caagggtgcc atccccgtcc
     6061 tcatctttgc gccgcgggtg acggactccc agctgttcgc gcttgcatgc ggagtggccg
     6121 cgatcctggg ccatgtcttt tccgtattcg tggggttcaa aggagggaag ggggtagcca
     6181 ccgccgccgg ggtcatgctg ggcctcacgc cgctggcgct cgtcgtcgct gcagcagtct
     6241 gggcg
//
LOCUS       DASYRV010000338         2743 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3661569, whole genome shotgun sequence.
ACCESSION   DASYRV010000338 DASYRV010000000
VERSION     DASYRV010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2743
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3661569"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..322)
                     /locus_tag="VGQ24_08910"
     CDS             complement(<1..322)
                     /locus_tag="VGQ24_08910"
                     /inference="COORDINATES: protein motif:HMM:NF019590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HEV8454997.1"
                     /translation="MSVTCFIRYEIDPFQRDAFAEYADHWARIIPRCGGDLLGYFLPH
                     EGTNNVAFALIGFESLAAYETYRGRLRADPEGRANFVFAQSKRLILREERTFLQPVQS
                     TLRPG"
     gene            542..1225
                     /locus_tag="VGQ24_08915"
     CDS             542..1225
                     /locus_tag="VGQ24_08915"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEV8454998.1"
                     /translation="MGDTPDIATIAGLIGDRARAAILMALMAGRSLTATELARAAGVT
                     KQTASSHLSKLVAARLAAVESAGRHRYFRLADRDVAAVLENLAGLAHRVGATRVDSGP
                     ADPALRKARVCYDHLAGELGVLVFDGLEQQGFLSSEEEQLTLTESGRTFCQGLGIDVG
                     ALERGRRPLCLTCLDWSIRRPHLAGALGAAILSRVYALGWARPHRATRVVSFSPAGER
                     SLRARFKLR"
     gene            complement(1245..1460)
                     /locus_tag="VGQ24_08920"
     CDS             complement(1245..1460)
                     /locus_tag="VGQ24_08920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8454999.1"
                     /translation="MRLGIVIGLVLLALGGWIASGNATYKTKKAAVDIGVLQANVREE
                     HQIPKWIGFASLGAGVLVLLASAKRTK"
     gene            complement(1512..1940)
                     /locus_tag="VGQ24_08925"
     CDS             complement(1512..1940)
                     /locus_tag="VGQ24_08925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455000.1"
                     /translation="MNAGQIGAILLGLLVGAAPSVQGGRVEPACAPPPARVPLAADLP
                     PLAGVWTLTVVNAEHRRAELTLELRATDSLQRMTVNIINRKPLYESRFLYIGTLDGNG
                     RAVGLLDGHTFTLSVHSVEPEGCPGLGARGSATSRVRTLV"
     gene            complement(1970..>2743)
                     /locus_tag="VGQ24_08930"
     CDS             complement(1970..>2743)
                     /locus_tag="VGQ24_08930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455001.1"
                     /translation="RTGPFAVGSPYRVVGTDARGRFYGRQAGLRATPKGIVQDDSVPI
                     DRWEPATGKRDTAGFYRVARSGLNLGLEPPFSATTVFSVSHEGGIAIVYPADYHVEFI
                     SPSGGRTIGKPNPWNRVRLSPTHKERWRRTQLPTCPSTRDRYGVIPLVENGETKFAKW
                     GRQREPKDHEWPTYLPPFLRSAASFSPDGMLWVERTADAGEPPFYDVIDGSGRVIRKV
                     VLRAGSRLLGFGKGTIYLVRKDSDELEYVQVFSTRRPTG"
BASE COUNT          463 a          871 c          933 g          476 t
ORIGIN      
        1 cgcccgggcg cagcgtggat tggactggct gcaggaaggt ccgctcctcc cgcagaatca
       61 ggcgcttgga ctgcgcaaag acgaagttcg cccggccctc gggatccgcc cgtaacctgc
      121 cgcgataggt ctcgtaagca gccagcgact cgaacccgat gagggcgaac gccacgttgt
      181 tggttccctc gtgcgggagg aagtagccaa gcaggtctcc tccgcaacgc ggaatgatcc
      241 gggcccagtg atccgcgtac tcggcgaacg cgtcgcgctg gaaggggtcg atttcatagc
      301 ggatgaagca ggtgaccgac atggcaactc ctggcagggt aggggacagg ccggggaggg
      361 ccaccgcgcc ggcgctgagc cggcgcagaa acccgcggcg cgaaacgcga tgtggctcgg
      421 gcggcgatgg catcggtggg cctccttacg cgcaaaggga tcggcgccgg cctgagggga
      481 ccggtcctcg cagacaaggt aggcgcttgc cggacgcata tggttcgact accatggaac
      541 catgggcgac actcccgaca tcgccacgat cgcgggcctc atcggggatc gtgcgcgagc
      601 cgccatcctc atggctctca tggcgggtcg ttccttgacg gcaacggagc tggcgagggc
      661 ggcgggcgta accaagcaaa ccgccagctc tcacctctcg aagctggtcg ctgcgcgcct
      721 ggcggcggtg gagagcgccg gccggcaccg ctacttccgg ctggctgatc gggacgtcgc
      781 cgcggtcctg gaaaacctgg cgggcctggc ccaccgcgtc ggtgcgaccc gggtcgactc
      841 gggtcccgcc gaccccgcgc tacgaaaggc ccgggtgtgt tacgaccatc tggcagggga
      901 gctgggcgtt ctggtctttg acggcctcga gcaacagggt ttcctgagca gcgaggaaga
      961 gcagctgacc ctcacggaat ctggcaggac attctgtcag gggctgggca tcgacgtggg
     1021 agcgctggaa cgggggcgga gaccgttgtg cctgacgtgt ctcgactgga gcatccgacg
     1081 cccgcatctc gcgggggccc tcggcgcggc gattctgagt cgcgtttatg cgctgggctg
     1141 ggctcggccg caccgggcca cgcgggtagt ctcgttctcg cccgcgggtg agcgctcgct
     1201 ccgggcgcgt ttcaagcttc gttaggggcc cgcatcgcgc gctgctactt ggtgcgcttc
     1261 gccgaggcga gcaggaccag aacgccggcg ccgagcgagg cgaacccgat ccacttgggg
     1321 atctggtgct cttcgcggac gttggcctgg aggacgccga tgtccacggc ggccttcttg
     1381 gttttgtagg tcgcgttgcc gctggcgatc cagccgccga gggcgagcag cacgagaccg
     1441 atcacgatac cgagtcgcac gtgtcacctc ctccggcccg atgcgtccga cggggctggg
     1501 cggttaagaa tctacaccag ggtgcgtact cggctagttg cgcttcctcg cgcaccaaga
     1561 cccggacatc cttccggctc gaccgaatga accgagaggg tgaaggtatg cccatcgagg
     1621 agtccgaccg cgcgaccgtt cccgtcgaga gtgccgatgt agaggaagcg gctttcataa
     1681 agcggcttcc ggttgatgat gttcaccgtc atgcgctgca gcgaatccgt cgccctcagt
     1741 tcgagagtca gttccgctcg gcgatgctcg gcattgacca ctgtgagggt ccacactcct
     1801 gcgagtgggg gcaagtcggc tgccagcgga acacgcgcgg gcggtggtgc gcaggcgggc
     1861 tcgactcggc cgccttggac ggagggagct gcgcctacga gcaggcccag caggatggcg
     1921 ccaatctgcc cggcattcat ggtaactgac acctcactga cgactgcact caaccagtag
     1981 gccgtcgggt gctgaacacc tggacatact cgagctcatc ggaatccttc cgaaccaggt
     2041 agatcgtgcc ttttccaaag ccgagtagtc ttgatccggc ccgaagcacg accttcctga
     2101 tgacgcgccc gctgccgtcg atcacgtcgt agaacggcgg ctcgccggca tccgccgtgc
     2161 gctccaccca aagcattcca tcgggagaga agctggcagc cgaccgcagg aaaggaggca
     2221 agtaggttgg ccattcgtga tcctttggtt ctctctgccg gccccacttg gcgaatttcg
     2281 tctctccgtt ttcgaccagt gggatcaccc cgtatctgtc gcgggtagag gggcaggtgg
     2341 gcagctgggt cctgcgccac cgctctttgt gagtagggct caggcgtacc cggttccagg
     2401 gattcggctt gccgatggta cgtccaccgg atgggctgat gaactcgacg tgatagtctg
     2461 ccgggtacac gatggctatg cctccctcgt gagataccga aaagacggtg gtcgctgaga
     2521 aaggcggctc caaccccagg ttcagcccgc ttcgcgcgac gcggtagaac ccggccgtgt
     2581 cgcgctttcc ggtcgcaggc tcccatcgat cgataggcac ggagtcgtct tgcacgatcc
     2641 ccttcggggt agcccggagg ccggcctgcc tcccgtagaa gcggcctcga gcgtccgtcc
     2701 cgaccactcg ataaggcgat ccgaccgcaa agggacccgt tcg
//
LOCUS       DASYRV010000339         3425 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_550138, whole genome shotgun sequence.
ACCESSION   DASYRV010000339 DASYRV010000000
VERSION     DASYRV010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3425
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_550138"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..656)
                     /locus_tag="VGQ24_08935"
     CDS             complement(78..656)
                     /locus_tag="VGQ24_08935"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455002.1"
                     /translation="MLQQTRVSRVEAYYHHFLERYPTIESLAAAPPSSVRESWEGLGY
                     YRRAVNLHRLAREVVRDRAGVIPGDPADLRRLPGVGRYTAGAVASFAFERATPAVDTN
                     VGRVLRRAFHPRSPQRSLTRRLWDTADQIVPRRGKSAWAFNQAIMELGALICTARVAR
                     CGECPVRSACATGRKLRERYTVNGRHAEIRSQ"
     gene            822..1610
                     /locus_tag="VGQ24_08940"
     CDS             822..1610
                     /locus_tag="VGQ24_08940"
                     /inference="COORDINATES: protein motif:HMM:NF014460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8455003.1"
                     /translation="MATETLGIRRFVGRWTVNAASHVGRVAFLVLDLVRGLREWRTWF
                     PRMMTEAWNIGVGSLFIVLLISGFAGAVTSLQARYQFTGTIPIYFLAGVIVESIVLEL
                     GPVLTGLILAGRIGARYAAELGTMRVTEQIDALESLGRSPSSHLLIPRVIAGLIMIPA
                     LTVLADVMGIASGWFSMKLVLPITDADFSYGARIFWRTQDAYFSVIKAFFFAGSITVI
                     SCYMGFTTQQGAEGVGRSTTGAVVSSSVMILLLDVILTKLLLNQ"
     gene            1607..2359
                     /locus_tag="VGQ24_08945"
     CDS             1607..2359
                     /locus_tag="VGQ24_08945"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEV8455004.1"
                     /translation="MIVLHGIRKTFGTQVVLDRVDFEVREGETVALLGPSGTGKSVLL
                     KHIIGLIRPDAGTVIVDDKEVGRLKRQELAELRSRIGYVFQNGALFDSMNVFENVRLG
                     ITDEDKYHDLNYCLERVGECLRLVNLAPETRDKYPAELSGGMRKRVGIARAIAGSPKY
                     LLYDEPTSGLDPVNADVIDSLVKRLDNELGVTSVMVTHDVRGAFRVADRLALLTGGKI
                     VQQGTQEEFLASQDPQVKEFLERDFPDATFAA"
     gene            2369..3280
                     /locus_tag="VGQ24_08950"
     CDS             2369..3280
                     /locus_tag="VGQ24_08950"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEV8455005.1"
                     /translation="MDLSYKREATVGTVIIAAIVLFVLGTTWLSGRSVGGSSEDFWKI
                     QFRDAGNLKTSSAVRISGVPVGKVEKIQLVEAGKVLISISLPEKITPKVDASAKIVPI
                     GFVGDAVVEFDPGDAPVSLTRNKIILGSQALGLADRAQVLSDRADSILLGAQAIVNQK
                     TADQLRSTLTTLEATLRAAQRTMAMYADSSRGPTAELTKTLAAFRQLSTRLDSALAHP
                     ALGRTLSRTDTLTSNLAAMTAQLRSTGERLDTLLAGVNRGQGTLGKLATDSGFYYDIR
                     DLSHSMRELLDELKKHPGKVPVTIKLF"
BASE COUNT          613 a         1092 c         1101 g          619 t
ORIGIN      
        1 gcctcttgcc acgcgtgcag ggacgtgtgg tcgcgcacga cagcaagtta tgtcgagcca
       61 gtacgttcaa tatcctgcta ttgggaccgg atttccgcgt gtcgcccgtt caccgtgtac
      121 cgttcacgca gtttccttcc cgtggcgcat gccgaccgca ccggacattc gccgcacctt
      181 gccacccgcg ccgtgcagat caacgccccc aactccatga tcgcctggtt gaacgcccac
      241 gcgcttttac cccgacgggg cacgatctgg tccgcggtgt cccagagccg gcgggtgagg
      301 gacctctgtg ggctgcgggg gtggaacgct cgccgaagca ctcggcccac gttggtgtcc
      361 accgccggcg tggcccgctc gaaggcgaag ctcgcgaccg caccggcggt gtagcggccg
      421 acgccgggca gccgtcgcag gtcggcaggg tcacccggga tcaccccggc gcggtcccgc
      481 accacctccc gcgccagccg atgcaggttc accgcgcgcc ggtagtagcc caatccttcc
      541 cagctctccc gtaccgacga cggcggcgcc gccgcgagtg attcgatcgt gggataccgc
      601 tcgaggaaat ggtggtagta cgcctccacc cgggacaccc gggtctgctg cagcatgaac
      661 tccgacacga ggatgtgata aggattccgg gtgcggcgcc agggcaggtc gcgccccttg
      721 caccgaaacc agcggatgat ccggcggcga aacgctgaag ctcgcaataa agtggaaggg
      781 gtagacttac gcctcatgcg aggcgaagat aggtgatcct tatggccacc gaaaccctgg
      841 gtatccgacg cttcgtgggc cgctggacgg tgaacgcagc atcccatgtc ggccgggttg
      901 cgttcctggt gctggacctg gtccgcgggc ttcgcgagtg gcggacctgg ttcccccgga
      961 tgatgacgga agcctggaac atcggggttg ggagcctttt catcgtgctt ctgatctccg
     1021 gctttgccgg agcggtcacc tccctgcagg ctcgctacca gttcaccggc acgatcccca
     1081 tctatttcct ggcgggcgtg attgtcgagt cgattgtcct cgagctcggg ccggtactca
     1141 ccggtctcat tctggctggg cggatcggtg cgcgctatgc agccgagctg ggaacgatgc
     1201 gggtgaccga gcagatcgac gccctggaga gcctgggccg ctcaccttcg tcgcatctgc
     1261 tgatcccccg ggtgatcgca ggccttatca tgattcccgc cctcaccgtg cttgccgatg
     1321 tcatgggcat cgcctcgggc tggttttcca tgaagctggt gctcccgatc accgacgcgg
     1381 acttcagcta cggcgcgcgc atcttctggc ggactcaaga tgcctacttc tcggtgatca
     1441 aggcgttctt ctttgccggg tcgattaccg tcatatcctg ctacatgggg ttcaccaccc
     1501 agcagggggc cgagggggtg ggacgctcga ccaccggcgc ggtcgtcagt agctcggtga
     1561 tgatcctgct gctcgacgtg atcctcacca agctgctgct caaccaatga ttgtgctcca
     1621 cggaatacgc aagacgttcg gcacgcaggt ggtgctggac cgagtcgatt tcgaggtgcg
     1681 tgagggagag accgtggcgt tgctgggccc atcgggaacc ggcaagagcg tgcttctcaa
     1741 gcacatcatc ggcctcatcc ggccggatgc cggcacggtc atcgtggacg ataaggaggt
     1801 gggccggctc aagcggcagg agctggccga gctccggtca cggatcggct atgtctttca
     1861 gaatggcgcg ctcttcgatt cgatgaatgt gttcgagaac gtccgtctgg gcattaccga
     1921 cgaggacaag taccacgacc tcaactattg cctggagcgg gtgggcgagt gcctccggct
     1981 ggtgaacctc gcccccgaga ctcgggacaa gtacccggct gagctctcgg gtggaatgcg
     2041 gaagcgggtg gggatcgcgc gcgccatcgc cggcagcccc aagtacctcc tgtacgacga
     2101 gcctacgtcg gggctcgacc cggtgaacgc cgacgtgatc gacagcctcg tgaagcgact
     2161 cgacaacgag cttggggtaa ccagcgtcat ggtcacccac gatgtccggg gggccttccg
     2221 cgtggccgat cgtctcgcgc tcctcaccgg cgggaagatc gtccagcagg gaacccagga
     2281 ggaatttctg gcctctcagg atccccaggt gaaggaattt ctggagcgcg acttccccga
     2341 tgccaccttc gctgcctgag gccattccat ggatctgagt tacaagcggg aggccacggt
     2401 cggaacagtc atcatcgccg ccatcgtgct cttcgtctta gggaccacct ggctgagcgg
     2461 gagatcagtc gggggaagca gcgaggactt ctggaagatc cagttccggg atgccggcaa
     2521 cctcaagacc agctcggcag tccggatctc cggcgtgccg gtcggcaagg tggagaagat
     2581 ccagctggtg gaggctggta aggtgctgat ctcgatcagt ctgccggaga agatcacccc
     2641 aaaagtggat gcgagcgcca agatcgtccc gattggtttc gtgggtgacg cagtggtcga
     2701 gttcgatccg ggtgacgctc cggtctcact caccaggaac aagatcatcc tcggctccca
     2761 agccctcgga ctggccgatc gggctcaggt gctcagcgat cgggcagata gcatcctcct
     2821 cggagcccag gcgatcgtga accagaagac cgccgaccag ctccgctcta cgcttacaac
     2881 cctggaggcc actctaaggg cggcgcagcg caccatggct atgtatgccg actccagccg
     2941 gggcccgacc gccgagctca ccaagacgct cgccgcgttc cggcagttga gcacccggct
     3001 cgacagcgcg ctggcccatc cggcgctggg ccgcacgctg agccgcaccg atacgctcac
     3061 gagtaacctg gccgcaatga cagctcagct gcgctccacc ggcgagcggc tggacacgct
     3121 gctcgcggga gtcaaccgag gccagggcac actcggcaag ctcgccaccg atagcggctt
     3181 ctactatgac atccgggacc tgtcgcactc gatgcgggag ctgctggacg agctgaagaa
     3241 gcacccgggg aaggtgccgg tgacgatcaa actgttttag gcggggaagc gagaagcggg
     3301 gaagcgggga agtggaaagc aagagtcatg tcatcctgag cgcagcaaag gagccgaagc
     3361 tcaagcaggg ttcagaccct tctatcgtgc tcacacctac ttgcttcgct gttccccgcc
     3421 tcccc
//
LOCUS       DASYRV010000340         6929 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1798651, whole genome shotgun sequence.
ACCESSION   DASYRV010000340 DASYRV010000000
VERSION     DASYRV010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6929)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6929)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6929
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1798651"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..634)
                     /locus_tag="VGQ24_08955"
     CDS             complement(<1..634)
                     /locus_tag="VGQ24_08955"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HEV8455006.1"
                     /translation="MTASFASDRCRRFRRLHQSGCFVIPNPWDVGSARLLARLGFPAL
                     ATTSSGFAWSLGRRDNQVSVGEALAHFRAIAQSVEVPVNGDFEGGFAVAPEQVGANVL
                     EATATGIAGLSIEDSTGDASEPLFDFDLAIERIRAARQAIDDSKTGVLLTGRSEGFIV
                     GRPDLAETIRRLTAYAEAGADCLYAPGIRTRAEIVAVVEAVAPRPVNVLVG"
     gene            complement(631..1359)
                     /gene="pdeM"
                     /locus_tag="VGQ24_08960"
     CDS             complement(631..1359)
                     /gene="pdeM"
                     /locus_tag="VGQ24_08960"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR04123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     endonuclease PdeM"
                     /protein_id="HEV8455007.1"
                     /translation="MTDVALTLAGEQVYLLSERAFFWPGAATLVVADLHWGKPALLQT
                     PGAPVQFATTSDDLGRLDSALQRTEARRMVVLGDLFHTKASRIPSHTLAELRRWRSLS
                     DWVEILLVRSNHDRHSGEPPNDLRINSVNPPAFVPPFVFRHEPVSSTDGYGLAGHVHP
                     GLTLVGRGLQRETLPCFVVGKNAALLPAFGSFTALGTVEPVPGDRAFVVAGDEVLEVT
                     APVDLDPTACPTSLHEMSAPDSQR"
     gene            complement(1404..2225)
                     /locus_tag="VGQ24_08965"
     CDS             complement(1404..2225)
                     /locus_tag="VGQ24_08965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455008.1"
                     /translation="MPHYICTTCGVQYAESALPPERCLVCEDERQYVGWTGQRWTTLP
                     DLQGSHRNQLDVEAPELISIATEPKFALGQRALHVRSDGGNVLWDCISLTDDRSVAAV
                     QALGGVAAIAISHPHYYSSLVDWSRALGGVSVYLHAADREWVMRPDPAIVFWEDETKE
                     LAPGLTLIHCGGHFPGATVLHWAGGAGGKGALLTGDVIQVGEDRKSLSFMYSFPNYIP
                     LDARSVRRIVAAVDPFDFDAIYGAWFGRNVATGARQALRRSAERYIAAISGRHLE"
     gene            complement(2333..2824)
                     /locus_tag="VGQ24_08970"
     CDS             complement(2333..2824)
                     /locus_tag="VGQ24_08970"
                     /inference="COORDINATES: protein motif:HMM:TIGR00481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HEV8455009.1"
                     /translation="MTTTDASFAEISLMSTAFENGGRIPYLYTCEGDDISPPLQWSGA
                     PTSTRSYALVCEDPDAPRGTWIHWVLFNISGDAVELTKAVPTLPELPAGARHGRNTAG
                     DMAYAGPCPPPGKPHRYFFRLYALDISLNLPPGATKTELEQAMDQHIVAQGTLMGTYE
                     HRK"
     gene            complement(2826..3200)
                     /locus_tag="VGQ24_08975"
     CDS             complement(2826..3200)
                     /locus_tag="VGQ24_08975"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEV8455010.1"
                     /translation="MSPMVLMFLAVGLVAGVLSGLFGIGGGILIIPALIFFAKFPTKL
                     ALGTSLGAMLLPVGLLGAYAYYQLGNLNIKASMLIGLGLFLGAWVGARLAQHLSGPTL
                     QRMFAVFIVIMAVRLWIDAGKG"
     gene            3302..3721
                     /locus_tag="VGQ24_08980"
     CDS             3302..3721
                     /locus_tag="VGQ24_08980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455011.1"
                     /translation="MRRVLPILLLGTAVLVLMDVVGALTGRPLGFPYPRLGVVSLLVY
                     FAVGALGAWRGSFTDGLAAAIVVGLLDGTLGPLAAWFVGPGPVDQTVAEPGIFAYQIA
                     VMTGTAAGVGLIGALAGSWLERRRVIRRVVPRFGSKS"
     gene            3718..6666
                     /locus_tag="VGQ24_08985"
     CDS             3718..6666
                     /locus_tag="VGQ24_08985"
                     /inference="COORDINATES: protein motif:HMM:NF014850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /protein_id="HEV8455012.1"
                     /translation="MNRQRTDLDGEWQFFPDPQQSLTLETLRDDDARKIRVPGPWQAQ
                     FDDLRDYSGVAWYRRLFEADGRTGGQAVASASSKELGAEVKTPSTTTRSAGTRPVRPS
                     VYLLHFGAVDYFATVWVNGVQVGEHEGGYLPFELDVTRALRHDGPNELVVRVLDPGND
                     ADFLPDFTFAEIPHGKQSWYGPIGGLWQNVYLERRSSTHITRLKITPDVPGEQARVVV
                     TLSRPGDRSLGVWLNVTDPRGQVRRHRFVVPAGKDQEELTIPVPEPMLWDTTDPNLYD
                     LQASLLDGSDDRAEPLDILSSRFGMRTIGTSSSGHLLLNGRVLYLRGALDQDYYPDLV
                     YTPFSDAELESQFAKAKHMGLNLLRTHIKITDPRYYDAADRAGILIWTELPNWQDLTD
                     NAKRRAKETMFGMVERDWNHPSIVIWTIVNENWGVDLAVNAGHRAWLADMYTQLKDLD
                     PYRLVVGNSPCFTNFHVVTDIEDFHNYYAMPDHYRKWRDWVQTFASRPPWTFAHVYES
                     IESWRQYIKDPWNPLPRQQAPEVRRRGSEPMVVSEFGNWGLPDVGRLKECYGGEPWWF
                     ETGIEWGDGVVYPHGIEQRFKAFHLDKVFPTLSDLSAASQRMQFTALKYQIEQMRRHP
                     SIVGYVITEFTDVHWESNGLLDMCRNPKTYYDVIGQVNCPDAIVPTDWERIAFWDGER
                     CEVKLALSHFSSSDLRGSRLEWQLDQWPEIRGTFEGVTPERAQLTNLGTVVFEVPRAE
                     KAVRARLEMRLLSASGELVTRNHHELYFFPRLETSGRPLKVSAPGLPRLSARLAAMGY
                     ELTDDLSADVVVVETMTDELRWYAQNGGKVLWLAESPESQQAHLGPISIAQRQGRSWQ
                     GDWASSMSWVRQDKVFGGIPTGGTVDFAFADLTPETVIVGLSPRDFAANVHSGLFVGW
                     AHHIVALVAERPIDRGRLMICTYRLREHLGTHPVATIMMHDMIARMAGSTTLAPARWA
                     PPSTPPVAIP"
BASE COUNT         1219 a         2254 c         2330 g         1126 t
ORIGIN      
        1 cgccgaccag gacgttcacc ggcctcgggg cgaccgcctc gaccaccgcc acgatctccg
       61 ctctagtgcg gatccccggc gcgtagagac aatcggctcc ggcttcagca taggcggtga
      121 gccggcggat cgtctcggcg aggtcggggc gcccgacgat gaatccttcc gagcggccgg
      181 tcaggagaac gccggtcttg ctgtcatcga tagcctgacg agcagctctg atccgttcga
      241 ttgcgagatc gaaatcgaag agcggttccg aggcgtctcc ggtggagtct tcgatcgaga
      301 gaccggcgat acccgtagcc gtggcctcga ggacgttggc acccacctgc tctggcgcaa
      361 ccgcgaagcc gccctcgaaa tccccgttga ccggtacctc gacgctctgg gcgatcgctc
      421 ggaagtgggc cagcgcctcg cccaccgata cctgattgtc ccgcctaccc agggaccagg
      481 cgaatccgga gctggtggtg gcgagcgcgg gaaagccgag ccgcgcgagc agccgggcgc
      541 tgccgacgtc ccagggattg ggaatgacga agcagccgga ttggtgcagc cggcggaatc
      601 gccggcatcg atcggacgcg aatgaggccg tcaccgctga gagtctggcg ctgacatctc
      661 atgcagcgac gtcggacagg cagtcggatc taggtccacc ggcgcggtca cctccagcac
      721 ttcgtctccc gcaaccacga acgcccggtc gcccggcacc ggctcgaccg tgccgagagc
      781 ggtgaagctc ccgaacgccg ggagcagcgc cgcattcttc ccgacgacaa agcagggcag
      841 ggtctcgcgc tggagcccgc ggcccaccag cgtgagtccc gggtgcacgt ggccagccag
      901 cccgtaccca tcggtcgagc tcaccggctc gtgccggaac acgaacggcg gtacgaaggc
      961 gggcgggttc acgctgttga tccggaggtc gttcggaggc tcgcccgagt gtcggtcgtg
     1021 attgctccgc accagcagga tctcgaccca gtcggacaga ctccgccacc gccgtagctc
     1081 ggccagcgta tgagacggaa tgcgggaggc cttggtgtga aagaggtcgc ccagcacgac
     1141 catccgtcgg gcctcggtgc gctggagcgc gctatcgagc cggcccagat cgtcgctggt
     1201 ggtggcgaac tgaaccgggg caccaggagt ctgcaagagt gctggcttgc cccagtgcag
     1261 gtcggccacc acaagcgtgg ccgccccagg ccagaagaac gcccgctccg acagcaaata
     1321 cacctgctcg cccgcgaggg tgagcgctac gtccgtcatg gagaatcagc gaccggtgag
     1381 gggtgaatgt ccaaacgtac ctatcattcg agatggcggc cagagatggc tgcaatgtag
     1441 cgctcggccg accggcggag cgcctgcctg gcaccggtag cgacgttgcg gccgaaccag
     1501 gcgccgtaga tcgcgtcaaa gtcgaacgga tccaccgcgg cgacgatgcg cctcaccgac
     1561 cgggcgtcga gcggaatgta gttggggaag ctgtacatga agctgagcga tttccggtcc
     1621 tcgcccacct ggatcacgtc gcccgtgagc agtgcgccct tgccgcccgc gccgccggcc
     1681 caatgcagca cggtcgcgcc gggaaagtgt ccgccgcagt ggatgagggt gagcccggga
     1741 gcgagctcct tggtctcgtc ttcccagaag acgatcgccg ggtccgggcg cattacccac
     1801 tcccgatcgg ccgcgtgcag atagaccgat accccgccga gcgcccggct ccagtcgacc
     1861 agcgacgagt agtagtgcgg gtgggagatg gcgattgcgg cgaccccgcc gagtgcctgg
     1921 accgccgcca cacttcgatc gtcggtcagg ctgatgcagt cccagagtac attgccgccg
     1981 tccgagcgca catgcagcgc ccgctgcccc agggcgaact tcggctcggt cgcgatgctg
     2041 atcagctccg gcgcctcgac gtcgagctgg ttccggtggg aaccctggag atcaggcagc
     2101 gtggtccagc gctggccggt ccagccgaca tactgccgct cgtcctcaca cacgaggcag
     2161 cgctcaggcg gcagagccga ctcggcatac tggacgccgc aggtggtgca aatgtagtgg
     2221 ggcactcata aagagtaaga ggtgagaggt gagaagtgag agggaaggct gtcaccctga
     2281 gggagcgtag cgaccgaggg ggccgaagct cgatgctgcc ccgcttcccc gcctacttcc
     2341 gatgctcgta ggtccccatc agcgtcccct gcgccacgat gtgctgatcc atggcctgct
     2401 ccagctcggt cttggtggcg cctggtggca ggttgagcga gatgtcgagc gcgtacaagc
     2461 ggaagaaata gcggtgaggc ttgcccggag gcgggcaggg tcccgcatac gccatgtcac
     2521 ccgcggtgtt ccgcccgtgc cgtgcaccgg cgggcagctc cggcagggtc ggcaccgcct
     2581 tggtcagctc cactgcgtcg ccggagatgt tgaagaggac ccaatggatc caggtgcccc
     2641 ggggtgcatc ggggtcctcg cacaccaggg catagctccg ggtgctggtc ggggctccgc
     2701 tccactggag cgggggagag atatcgtcgc cctcgcaggt gtacaggtac ggaatacgac
     2761 ccccgttctc gaaggccgtc gacattaagc tgatttcggc gaagctggcg tcggtggtgg
     2821 tcatctcaac ccttccccgc gtcgatccat agccggaccg ccatgatgac gataaaaaca
     2881 gcgaacatcc gctggagggt aggccccgac aggtgctgtg ccagccgcgc tccgacccag
     2941 gcgcccagga aaagtcccag accaatgagc atcgatgcct tgatattcag gttccccagc
     3001 tggtagtagg cgtaggcacc cagcagccct acaggcagca gcatcgcgcc aagcgaggtg
     3061 ccgagggcga gcttcgttgg gaacttggca aagaagatca gggcggggat gatgaggatg
     3121 ccaccgccta tcccgaacaa ccccgagagc actccagcga ccagaccgac ggcgagaaac
     3181 atgagcacca tgggcgacac cctcttgtga gttagccaaa gaaagccaac tttattcttg
     3241 ctgcaatacc gctgctcgcg ccttaccagt gcccaggaga tatgatgatg aggggaagac
     3301 cgtgagacgg gtgttgccga tcctcctcct cggcaccgcc gtgctggtcc tgatggatgt
     3361 cgtcggcgcg ctgaccggca ggccgcttgg ttttccttat ccccggctgg gcgtcgtatc
     3421 tctcctggtc tatttcgctg tcggcgcgct cggcgcctgg cgtggaagct tcaccgacgg
     3481 cctggccgcc gcgatcgtcg tcgggctgct cgacggcact ctcggcccgc tggccgcctg
     3541 gttcgtgggc cccggaccgg tagaccagac ggtcgccgag cccggcatct tcgcctacca
     3601 gatcgccgtc atgactggga ccgcggctgg ggtcggcctc atcggagcgc tggccgggag
     3661 ctggctcgag cggcgccggg tcatccgaag ggtcgttccc cgctttggga gtaagtcgtg
     3721 aatcggcagc gaaccgatct ggatggtgag tggcagttct ttccggaccc ccagcagagc
     3781 ctgacactcg agacgctccg ggatgacgat gcgcggaaga tccgggttcc gggtccgtgg
     3841 caggcgcagt tcgatgacct gagggactac agcggggtgg cttggtatcg tcgcctcttc
     3901 gaggcggacg ggcggacagg cggacaggcg gtcgcatctg cgagctcgaa ggagctgggt
     3961 gcggaggtga agaccccatc caccaccacc cgctccgcgg gtacccggcc cgtccggccg
     4021 tccgtctacc tcctccactt tggcgcggtg gactacttcg ccacggtgtg ggtgaacggg
     4081 gtccaggttg gggagcacga gggcgggtac ctgccgttcg agctcgacgt cacccgggcc
     4141 ctccgacacg acgggcccaa cgagctggtg gtccgcgtgc tcgaccccgg caacgacgcc
     4201 gacttcctac ccgacttcac cttcgccgag atcccccacg gaaaacagag ctggtatggg
     4261 ccgatcgggg gcctctggca gaacgtctac ctcgagcggc gatcgtccac ccacatcacc
     4321 cggctcaaga tcacccctga cgtgccgggc gagcaggctc gggtcgttgt gacgctcagc
     4381 cgcccgggcg accggtccct gggcgtctgg ctcaacgtca ccgacccgcg ggggcaggtg
     4441 cgacgccatc gcttcgtggt cccggcaggg aaggatcagg aggagctgac catcccggtt
     4501 ccggaaccga tgctctggga caccacggac cccaacctgt acgacctcca ggcgtcgttg
     4561 ctcgacggaa gcgacgaccg ggccgaaccg ctggacattt tgtcctctcg attcgggatg
     4621 cgcaccatcg gcacctcgtc ctcggggcac ctgctgctca atgggagggt gctctacctt
     4681 cgaggagcgc tggaccagga ctactatccc gacctggtgt acaccccgtt ctccgacgcc
     4741 gagctcgagt cccagtttgc caaggccaag catatgggac tcaacctcct gcgcacccac
     4801 atcaagatca ccgacccgcg ctactacgac gcagccgacc gggccggcat tctgatctgg
     4861 accgagctac ccaactggca agacctcacc gataacgcta agcgaagagc caaggaaacg
     4921 atgttcggta tggtcgagcg ggactggaat catccctcga tcgtgatctg gaccatcgtg
     4981 aacgagaact ggggcgtcga cctggcggtg aacgcgggtc accgtgcgtg gctggcggac
     5041 atgtataccc agctcaagga tcttgacccg taccgcctgg tggtggggaa ctcgccctgc
     5101 ttcaccaatt tccatgtcgt gaccgacatc gaggacttcc acaactatta cgcgatgccg
     5161 gatcactatc ggaagtggag ggactgggtc cagactttcg ccagccggcc gccctggacc
     5221 tttgcccatg tgtacgagag catcgagtcg tggcggcagt acatcaagga tccgtggaac
     5281 ccgctcccgc ggcagcaggc gcccgaggtc cggcggcggg ggagcgagcc gatggtggtg
     5341 tcggagttcg gcaactgggg gctgcccgac gtggggaggc tcaaggagtg ctacggcggc
     5401 gagccctggt ggttcgagac cgggatcgag tggggggacg gtgtggtgta cccccacgga
     5461 atcgagcagc gcttcaaggc gttccacctc gacaaggtct ttcccacgct gtccgatctc
     5521 tcggcggcca gccagcggat gcagttcacc gcgctcaagt atcagatcga gcagatgcgg
     5581 cggcatccca gcatcgtcgg ctacgtcatc accgagttca ccgacgtgca ctgggagagc
     5641 aacggactgc tcgacatgtg ccgcaatccg aagacctact acgacgtcat cggccaggtg
     5701 aactgtccgg acgccatcgt gccaaccgac tgggagcgaa tcgcgttctg ggacggagag
     5761 cggtgcgagg tgaagctggc gctctcccac ttctcctcca gcgatcttcg cggctcacgg
     5821 ctggagtggc agctggacca atggcccgag atccggggga cgttcgaggg cgtgaccccg
     5881 gagcgggccc agctcaccaa tctcgggacg gtcgtgttcg aggtgcctcg ggcagagaag
     5941 gcggtgcgcg cgcggctgga gatgcggctg ctcagcgcct cgggcgagct ggtgacccgg
     6001 aaccatcacg agctgtactt cttcccccgg ctggagacct ccggccgtcc gctcaaggtc
     6061 tcggcccccg gacttcctcg cctctcggcg cggctggccg ccatgggtta cgagctgacc
     6121 gacgatctct cggcggatgt ggtggtggtc gagacgatga cggacgagct ccgctggtat
     6181 gcccagaatg ggggcaaggt gctctggctg gccgagtcgc ccgagtcgca gcaggcgcac
     6241 ctgggtccga tcagcatcgc gcaacggcaa gggaggagct ggcagggcga ctgggccagc
     6301 agcatgagct gggtccggca ggacaaggtc ttcggcggga ttcccaccgg cgggacggtg
     6361 gacttcgcct ttgccgacct gacgccggag acggtgatcg tcgggctcag tccgagggac
     6421 ttcgccgcga acgtccactc gggtctcttc gtgggctggg cccaccatat cgtggcgctg
     6481 gtggcggagc gccccatcga ccggggccgg ctgatgatct gcacctaccg gctcagagag
     6541 cacctcggta cccacccggt ggccacgatc atgatgcacg acatgatcgc ccgcatggcc
     6601 ggctcgacca ctctggcacc ggcgcggtgg gcaccgccga gcacgccacc cgtcgcgatt
     6661 ccgtaaaccc aacgcccgcc tttcggcggg cccaaacatg atcgtttggg cgcggacgcc
     6721 cagcgggccc atgagggccc gcctacgggt atcaccggtc ctgcggaccg gaatcccgtg
     6781 gccaaagtcg ctccgaatca tcatcgggcg cgcagaggcc gggtggccca tgagggcccg
     6841 ccgacgggta tcaccgcgga ccaaagggac ccgtttgtat ggccgggatg aggtcgccga
     6901 atatggacgt ggagcttttc gtgcctggg
//
LOCUS       DASYRV010000341         7860 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2212110, whole genome shotgun sequence.
ACCESSION   DASYRV010000341 DASYRV010000000
VERSION     DASYRV010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7860
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2212110"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..494
                     /locus_tag="VGQ24_08990"
     CDS             <1..494
                     /locus_tag="VGQ24_08990"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEV8455013.1"
                     /translation="VDLDPIPFSVSDILESVRDIVQPIAEEKSLTVRVTAPDADFRIG
                     HPVALSRVLLNLTTNALKFTAEGFVEVAAVSRTARCVEFSVRDTGRGIPPQSMATLFE
                     PFRRRQKPGEYAFSGSGLGLSICRKLVEAMGSVMQVETAPGYGTRFYFVLDLPVAGEP
                     QFG"
     gene            745..2472
                     /locus_tag="VGQ24_08995"
     CDS             745..2472
                     /locus_tag="VGQ24_08995"
                     /inference="COORDINATES: protein motif:HMM:NF014045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEV8455014.1"
                     /translation="MGPLDVLPITGSGQAYQGTRGWGPETERYVNKPLIRPGRHLSQP
                     PVHAPHAALLIDFDNVTLGIQKDLTKELRTLLNSDIIKGKVAVQRAYADWRRYPQYIV
                     PLSESSIDLIFAPAFGSSKKNATDIRLAIDAIELVFTRPEIGTFILLSGDSDFSTMVI
                     KLKEYGKYVIGVGIRESASDLLIQNCDEYYSYNDLAGLTKEVDTPSTQRDPWELAAEA
                     VSQMARNGDVMRSDRLKQVMQQIDPNFDERNAGFNRFSKFVIEAGQKGVVQISKLDNG
                     QYEVSPGSAAPAVSAPPPRPRVPAEARDGREESGRRGRGRRGRGGRDRAGVREGTGSR
                     ARSSTGPREGASQRGPAQEDRTTTGALTLARAFQLMSEALSEFRAPVGHEALRLRMVA
                     MHGREDPLLDAARFPRLLRQANDAEVADVRKVGDDDYEISSQRVPTRPLPQLAAPRDE
                     RAPLTGSEAERLEVTAAPEMAPSGNRDNGQRLGVRFRRGSRGPLRAGEIPLIGVVQVE
                     PPAPPEPVPIEAAPEPVAEAKRPRARRPPRKRAAAVPAAADPSGSPEGGGESPPAKRP
                     RTRSRKKAE"
     gene            2469..3089
                     /locus_tag="VGQ24_09000"
     CDS             2469..3089
                     /locus_tag="VGQ24_09000"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF002003.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003905 - alkylbase DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HEV8455015.1"
                     /translation="MSQVRRAATLPVAFFSRPTELVAQDLLGMVVVSTAGDELTTARI
                     VETEAYLGYDDPASHGYLHRRNTRNQALFGPPGYWYVYLSYGMHWCANLVCQRAGLAS
                     AVLLRALEPLDGLDVMRRRRGPVPDRELCSGPGKLCQALGITRDLDGRRMAESQVEVH
                     RPRSNEENTIAVTSRIGITKAADWPLRFVVAGSPWLSRKTTGGGSQ"
     gene            complement(3127..3825)
                     /locus_tag="VGQ24_09005"
     CDS             complement(3127..3825)
                     /locus_tag="VGQ24_09005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455016.1"
                     /translation="MRKVTLSIPVAVLALCLGAAQLPAQQPGSSNFQWYVGGQGGIIN
                     FETIEGRQTVPLGGGHLLVMGRRTGLLISVDQGFGSNEQGMYLLQDVNESDSVVAQGL
                     VAVSFTNIRKYSAMLMAHPIRGPITPFFGIGVGILHTSGHTPDDSFSKGIGSAGFGSF
                     IGGLNFQVSRLSAFGQYQITTSPAEQIVTQKFSDGSRLVATGNLYRGPTHTFSAGLRF
                     SLGNARERATSGGY"
     gene            complement(4063..5262)
                     /locus_tag="VGQ24_09010"
     CDS             complement(4063..5262)
                     /locus_tag="VGQ24_09010"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: protein motif:HMM:NF005394.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008890 - glycine C-acetyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HEV8455017.1"
                     /translation="MTNPLERRIEPELEQFIQDGTYKRLNFLDSPQAARVRMEGRGEV
                     IILSSNNYLGLCNEPAIVHAGKDALDRFGAGTASVRFICGTFTIHRELEAACARLVGT
                     AASLSFVSAWNANEAVPATLLSENDIVISDQLNHASIIDAVRLAKAITKCQSAVYRHA
                     DLADLDAKLATARDRRVKMVITDGVFSMEGAIAKLPDLIELCRRHEAVLVVDDSHGTG
                     VLGENGRGTAEHFGLAGEVDIITSTLGKALGGAAGGFVAASAAVCDYLTQRARPQLFS
                     NALPPTVAGSALASIEYLEAHPERVATLRANAQYFREQLLGLGFKPLPGETPIIPVIL
                     GETAAAIRMSDLLLAEGVFVTGFGYPVVPQGQARVRCQISAAHTRADLDQALAAFRKV
                     GRQLRLI"
     gene            complement(5259..6299)
                     /gene="tdh"
                     /locus_tag="VGQ24_09015"
     CDS             complement(5259..6299)
                     /gene="tdh"
                     /locus_tag="VGQ24_09015"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008743 - L-threonine 3-dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006567 - threonine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HEV8455018.1"
                     /translation="MRALVKESAGPGIVLREVPVPACGPSEALIRVHHAGVCGTDLHI
                     WEWDSWASKRLKPPVIVGHEFAGEITQLGSEAGAAGLLAVGDLVTAEGHIVCGHCLQC
                     RLGAAHLCRRTQIIGVDRDGAFADYIVMPASNVMRLDGIPTEIGAIMDPMGNAVHTVL
                     EAEVPGSTVLVLGCGPIGCFAIGVARAAGASLVMASDLNPKRLELACAMGAQITLNPK
                     HDDVVARVRELTGGDGVDLVCEMSGHPSGHAQAFAAARMGGRVNLLGTPSQTTEVDFA
                     RDIIFKGLTLYGVTGRKMYQTWHQMLRFLRAGQVDPRPVITHRFPLEQIADAIQVIKD
                     GQAGKVILEVGP"
     gene            complement(6577..>7860)
                     /locus_tag="VGQ24_09020"
     CDS             complement(6577..>7860)
                     /locus_tag="VGQ24_09020"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEV8455019.1"
                     /translation="EIGEKITGIPRDLIRRAAEMYARGPRTSTLWAMGLTQHATGTDI
                     VASLLNLLLACGMIGKWGAQMMPIRGQNNVQGASDVGAIPFAYTDYRSVGQPANRAEY
                     ARAWGVPEESLSLQDGMMVTEMTQDDSPIRGLYIMGENPVISDPNIAHAEDWVRGLEF
                     LAVQDLFLTETARWADVVLPGSSFAEKAGTYVNTERRIQLTEAALDPPGSARRDLDIL
                     MELSNRLGLETTWGGPEDVMREIASVTPSWRGVTYAALKGSGLQYPVLTPESKGTAFL
                     FSDAFPTADGRALFVPVEYVAPEELPDDDYPFVMNTGRQMYHWHTGTMSRRSTGLDSR
                     EPTPVVEINPLDAIGMGLADGDTVRVTSRRGSMLIGTRVSERQARGQIFIPFHFREAA
                     ANLLTNPRLDPYAKIAEFKISAVKVEPVREPAFAD"
BASE COUNT         1409 a         2528 c         2556 g         1367 t
ORIGIN      
        1 tggtcgatct ggatccgata cccttctccg tgagcgacat cctggaatcg gtgcgtgaca
       61 tcgtccagcc gatcgcggaa gagaagagcc tcacggtgcg ggtgacggcg cccgacgccg
      121 acttcaggat cgggcatccg gtggctttga gccgggtact gctcaatctc actaccaatg
      181 ccctcaagtt cacggcggag ggcttcgtcg aggtcgccgc ggtctcccgg acagcccgct
      241 gcgtcgagtt ctccgtgcga gacaccggcc gcgggatccc gccgcagtcc atggcgacgc
      301 tcttcgagcc gttccgccgc cggcagaaac ccggtgagta cgccttctcg ggttcgggcc
      361 tgggattgtc catctgccgc aagctggtcg aggccatggg ctccgtaatg caggtagaaa
      421 ccgctccggg ctacggcacc cgcttttact tcgtgctcga tctgcctgtc gcgggcgagc
      481 cgcagttcgg ttgatccccc ttccaacccc cgaacgaacc cgataaattc ttgtcgctag
      541 ccgttatccg aggatggcag ggaatatggc gcgcgtcggc gacccggccg gccgtggctt
      601 tcctggtaac gctggcacga ccacggctcg ctccccactc gacagctgca cacacgttgc
      661 gctggtgacg gagcggagcc agactccgcg ctcgccgcga ctccatgcag tcgccctgcg
      721 cccccacata aggttcccga cctcgtgggc ccccttgacg tcctgccgat taccgggtcc
      781 ggccaggcgt accagggcac acggggctgg ggacccgaaa ccgagcgcta cgtgaacaaa
      841 ccgctgattc ggccaggccg acatctcagc caacccccag tgcatgctcc acacgccgcc
      901 ctgctcatcg acttcgacaa tgtgaccctc ggcatccaga aggacctgac taaagagctt
      961 cgtacgctcc tcaacagcga catcatcaag ggcaaggttg ccgtccagcg agcctacgcg
     1021 gactggcggc gctacccaca gtacatcgtc ccactctccg aatcttcgat cgatctcatc
     1081 ttcgcgccgg ccttcgggtc gagcaagaaa aacgcgaccg acatccgtct agccatcgat
     1141 gccatcgagc tggttttcac ccgcccggag atcgggactt tcatccttct ctcgggcgac
     1201 agtgacttct cgaccatggt catcaagctc aaggagtacg gcaaatacgt gatcggggtc
     1261 ggaatccggg agtcggcgag cgatctgctg atccagaact gtgacgagta ttactcgtac
     1321 aacgatctgg ccgggctcac caaggaagtc gataccccat ccacccagcg ggatccctgg
     1381 gagctcgccg cggaggccgt atcccagatg gctcgcaatg gggacgtgat gcggtccgat
     1441 cggctcaagc aggtcatgca gcagatcgat cccaacttcg acgagcgcaa tgcgggattc
     1501 aaccggttca gcaagttcgt gatcgaagcg ggtcagaagg gcgtcgtcca gatctccaag
     1561 ctcgacaatg ggcagtacga ggtgtctcct ggttcggccg cgccggcggt ttcggcgccc
     1621 ccgccacggc caagggtccc ggcggaggct cgagatggtc gcgaagagag cgggcgtcgg
     1681 ggacgcggcc gccgtggccg gggtggccgc gatcgggccg gtgtgcgtga gggtaccgga
     1741 tctagagcgc ggtcgagcac gggcccgcgc gagggtgcct ctcagcgtgg ccccgctcaa
     1801 gaggaccgca cgacgactgg agcgctcacg ctcgctcgtg cttttcagct gatgtcggag
     1861 gcgctctccg agttccgcgc tccggtggga cacgaagcac tacggctccg catggtggcc
     1921 atgcatgggc gcgaagaccc gctgctcgat gcagcccgct tcccccgatt gttgcgccag
     1981 gccaacgacg ctgaagtcgc ggatgtgcga aaggtgggag acgacgacta cgagatctcg
     2041 tctcaacggg tgcccaccag gccgctgcca cagctggccg cgccgcgtga cgagcgtgcc
     2101 ccattgactg ggtcggaagc ggagcggtta gaggtaacag ccgcgcccga gatggcgcca
     2161 tccggcaacc gcgataacgg tcagcgactc ggggtccggt tccgccgcgg ctcccggggt
     2221 ccgttaaggg cgggagaaat tcctctcatc ggcgtggtac aggtcgagcc gccggctccg
     2281 ccagaaccgg tccccatcga agccgctccc gagccggtgg cggaagcaaa gcgtccccgt
     2341 gcccggcggc cgccgcggaa gcgagccgcc gctgtgccgg cagccgccga tcccagtggg
     2401 tctccagaag gcggcggtga gtcgccgccc gctaagcgac cccgaacgcg cagcaggaaa
     2461 aaggcggaat gagtcaggtg agacgggcag ccacgctgcc cgtcgcgttt ttcagccgcc
     2521 cgactgaact tgtggcgcag gatctgttgg gaatggtggt ggtctcgacg gcgggggacg
     2581 agctcacgac cgcgcggatc gtggagaccg aggcgtatct cggttacgac gacccggcgt
     2641 cccacggcta tctgcatcgg cgtaatacgc gcaaccaggc actctttggt ccgccgggct
     2701 actggtacgt ctacctgtcc tacggaatgc actggtgcgc caacctggtc tgtcagaggg
     2761 ccgggttggc cagtgccgtg ctgcttcgag ccttggagcc gctcgacggc ctggacgtga
     2821 tgcggcggcg gcgagggccg gtcccagatc gggagctctg ctccggaccg gggaagctgt
     2881 gccaggcgct cggcatcacg cgagatctgg atggcagaag gatggccgag agccaagtgg
     2941 aggtgcatcg gccaagatcg aacgaggaaa acacgatcgc ggtgacatcg aggatcggaa
     3001 taaccaaggc ggccgattgg cctctcaggt ttgtcgttgc cggatccccg tggctttccc
     3061 gcaagacaac gggcggaggg tcgcaatgac cgtccgcccg ggcagtacct ggcttcccgc
     3121 ggtgcttcaa tagccgccgc tggtcgccct ctcccgcgcg ttgcccaggc tgaaccgcag
     3181 gccggcgctg aaggtgtggg tgggacccct atacagattg ccagtcgcga ccaaccggct
     3241 tccgtcgctg aacttctggg tgacgatctg ttcagccgga gaggtggtga tctggtactg
     3301 accgaaagcg ctgagccggc tgacctggaa gttgagccca ccgataaacg atccgaagcc
     3361 cgcgctccca atccccttgc tgaagctgtc gtccggcgtg tgcccgctgg tatggaggat
     3421 gccgactcca ataccgaaga atggcgtgat cggtcccctg atcgggtgcg ccatcagcat
     3481 ggctgagtac tttcggatgt tggtgaagga aacggcaacc aatccttgcg ccaccaccga
     3541 gtcggactca ttgacgtctt gcaagagata cataccctgc tcgttggacc cgaagccctg
     3601 gtccactgag atcagaaggc cggtgcgccg tcccatcacc aggaggtgac cgccgccaag
     3661 gggcaccgtc tgcctgcctt cgatggtctc gaaattgatg attccgccct ggccgcctac
     3721 ataccactgg aagttgctgc tgcccggctg ttgagccggg agctgggccg ccccaagaca
     3781 aagggccagc accgcgaccg ggatgcttag ggtgaccttg cgcatcagtc tctccgtagg
     3841 gtgtccgcac cagggctttc ctggcgctta ccgggcgcta cctcgcacgg tacgtcaaaa
     3901 tgcgggaact catgctggaa agcgcgggag gggagtgtaa gcggagcccc caggcccctc
     3961 ttaccattcg gatcagcaag gacttaccgc ttccaagcca gacctcccat acccgtcggg
     4021 agagtgggaa gtgcaaggag tgggcctgtc tagaccctgg acctaaatga gacgaagctg
     4081 acggccaacc ttacgaaacg cggccagggc ctgatcgaga tctgcccggg tatgggcggc
     4141 ggatatctgg caccgaaccc gcgcttgacc ttgggggacc accgggtagc cgaagccggt
     4201 cacaaagacg ccttcggcca acagcaggtc gctcattcga attgccgcag cagtctcccc
     4261 tagaatgacc ggtatgatcg gggtctcgcc gggcaacggc ttgaacccga gccccagcag
     4321 ctgctcgcgg aaatactgtg cgttggcccg caaggttgcg acacgctccg gatgcgcctc
     4381 gaggtactcg atgctggcga gcgcgctccc ggccacggtg ggtgggagcg cgttggagaa
     4441 gagctgtgga cgggcacgct gcgtcaggta gtcacagacc gcggccgacg cggcgacgaa
     4501 cccgcctgcc gcgccgccaa gtgccttacc cagagtagag gttatgatgt caacctcacc
     4561 ggccagtcca aaatgctccg cggtgccacg gccgttttct cccagcacgc cggtcccgtg
     4621 agaatcatcg actaccagga ccgcctcatg cctgcggcag agctcgatga ggtcgggcag
     4681 tttggcaatc gcaccctcca tcgagaatac gccgtcggtg atcaccatct tgacccggcg
     4741 atcccgcgcg gtggccagct tggcgtcgag gtcggccaga tcggcgtggc ggtacaccgc
     4801 actctggcac ttggtgatag ccttggccaa ccggaccgcg tcaatgatcg acgcgtggtt
     4861 cagctggtcg ctgatgacga tatcgttctc actgagcagg gtggcaggca ccgcctcgtt
     4921 cgcattccaa gcgctgacga agctgagcga ggcagccgtt cccaccaggc gagcgcaggc
     4981 ggcctcgagc tcccggtgaa tggtaaaggt gccacagata aatcgcacgg aggcggtacc
     5041 tgccccgaaa cgatccagtg cgtccttgcc ggcgtggacg atggccggct cgttgcagag
     5101 acccaggtag ttgttggagg agaggatgat gacctcacct cttccttcca ttcggactcg
     5161 ggcagcctgg ggactgtcga gaaagttgag ccgcttgtag gtgccgtcct gaatgaattg
     5221 ctccagctca ggctcgatgc gacgctccag cgggttggtc acggcccgac ctccaggatc
     5281 acctttcccg cttggccgtc cttgatcacc tgaatcgcgt cggcgatctg ctccagcggg
     5341 aaccgatggg tgatcaccgg gcgcggatcc acctggcctg cccgaaggaa gcggagcatc
     5401 tggtgccagg tttgatacat cttcctgccg gtgacgccgt acagcgtgag gcccttgaag
     5461 atgatgtctc gggcaaaatc cacctccgtc gtttggctcg gcgtgcctaa caggttcacc
     5521 cgtccaccca ttcgagccgc ggcgaatgcc tgggcatgcc cgctggggtg cccgctcatc
     5581 tcgcagacca gatcgacacc gtcgccaccg gtcaattccc ggacccgggc cacgacgtcg
     5641 tcgtgcttgg ggttcagggt gatctgggcg cccatggcac aggccagctc gagccgcttt
     5701 gggttcaagt cactcgccat cactagggag gcacccgcgg cgcgcgccac gccgatcgcg
     5761 aagcacccga tgggaccaca gcccaatacc aggacggtgc tccccggcac ctcggcctcg
     5821 agcaccgtgt gcacggcgtt gcccatgggg tccatgatgg caccgatctc ggtggggatg
     5881 ccgtcgagcc tcatcacgtt cgaagcgggc atcacgatgt aatcggcgaa ggcgccgtcg
     5941 cggtctacac cgatgatctg ggtccggcga cacaggtgag cggcgccgag gcggcattgg
     6001 aggcagtgac cgcagacgat gtggccctct gccgtgacca gatcaccgac cgcgagcagc
     6061 ccggcggcgc ccgcctccga tcccagctgg gtaatctccc cggcgaactc gtgccccacg
     6121 atcaccggtg gcttgaggcg cttgctggcc cagctatccc actcccagat gtggaggtcg
     6181 gtcccgcaga cgcccgcgtg gtgaacccgg atcagcgcct cgctgggtcc gcaggcaggg
     6241 acgggcactt cgcggagaac gatgccgggg ccggcggact ctttgaccag ggcgcgcatg
     6301 caggctcggg gttgggtcgc ggggaatata aggcgggaag gacgggaaag acgggaagga
     6361 cggcggggca cgaaaattcg atgactatct cattggccaa gggaaacatt ttgacgtatg
     6421 gccatttacc aacacatcaa ggcttgggat cggtgccacc agctatgtct cgccgtattt
     6481 gaggtgacga actcatggcc tccagcagaa cggttcggac tgatttcgca ggctcggcgg
     6541 gtgggtgacc ttcccgtcct tcccgtcctt cccgtcttag tcagcgaagg ccggctcccg
     6601 caccggctct acctttaccg cgctgatctt gaactccgcg atcttggcgt agggatcgag
     6661 ccggggattg gtgaggagat tggcggcggc ctcgcggaaa tggaacggaa tgaagatctg
     6721 tccccgcgcc tggcgttccg acacccgggt gccgatcagc atcgagccgc ggcgggaggt
     6781 gactcgaacg gtatcgccgt cggccaggcc catcccgatg gcgtcaagcg gattgatctc
     6841 gactacgggc gtgggctcgc gcgaatcgag cccggtggag cggcggctca tggtgccggt
     6901 gtgccagtgg tacatctggc gcccggtgtt catcacgaag ggataatcat cgtccggcag
     6961 ctcctccggc gcgacgtact cgaccggaac gaacagcgcc cggccatccg ccgtgggaaa
     7021 ggcatcgcta aagaggaagg cggtaccctt ggactccggc gtgagcaccg ggtactggag
     7081 gccgctgccc ttgagggctg cgtaggtcac gccccgccat gagggggtca ccgaggcgat
     7141 ctcccgcatc acatcctcgg gtccacccca ggtcgtctcg aggcccagcc ggttgctcag
     7201 ctccatgagg atatcgagat cgcgacgagc cgaccccggc ggatcgaggg cggcctcggt
     7261 gagctggatc cgccgttcgg tattcacgta ggtgccggcc ttctcggcga acgacgatcc
     7321 cgggagcacg acatcggccc agcgggccgt ctcggtcaga aacaggtcct gcaccgcgag
     7381 aaattccaat ccgcgaaccc aatcctcggc gtgggcgata ttgggatccg agatcacggg
     7441 attttcgccc atgatgtaga gcccacggat tgggctgtcg tcctgggtca tctcggtgac
     7501 catcatcccg tcctggaggg agagcgattc ctcgggcact ccccaggctc gggcgtactc
     7561 cgctcggttg gccggctgtc ccacggagcg atagtcggtg taggcgaacg gtatcgcccc
     7621 cacgtcgctg gcgccctgga cgttgttctg tccccggatc ggcatcatct gggcgcccca
     7681 cttgccgatc atcccgcagg cgagcagcag gttgaggaga ctggccacga tgtccgtgcc
     7741 ggtggcgtgc tgggtcagcc ccatggccca cagggtcgag gtccggggcc ccctggcata
     7801 catctcggcg gcacgccgga tcagatcgcg agggataccg gtgatcttct caccgatctc
//
LOCUS       DASYRV010000342         6240 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1940047, whole genome shotgun sequence.
ACCESSION   DASYRV010000342 DASYRV010000000
VERSION     DASYRV010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6240
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1940047"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..395)
                     /locus_tag="VGQ24_09025"
     CDS             complement(<1..395)
                     /locus_tag="VGQ24_09025"
                     /inference="COORDINATES: protein motif:HMM:NF013097.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEV8455020.1"
                     /translation="MTGTSGEMPFLDHLEELRSRILRSLAAVVLGCALGLWLVQRFQL
                     VSLLKAPIAPYLTGGKLVVTSPTEPVMIVFKLGLFVGLVLAYLFVVPQALRVLFSFQT
                     EAIAPFITYDAYFGFVLQVTLALGLSFELP"
     gene            complement(414..1220)
                     /gene="ybgF"
                     /locus_tag="VGQ24_09030"
     CDS             complement(414..1220)
                     /gene="ybgF"
                     /locus_tag="VGQ24_09030"
                     /inference="COORDINATES: protein motif:HMM:NF024915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system protein YbgF"
                     /protein_id="HEV8455021.1"
                     /translation="MRHHLSAARLLVPWLRRGAWVGVGLGLLGGCITKGDIQRVQDDI
                     ALFKAETARRDSARAAQLAELIQVQQRIMDSLSSTRKSVAQLRGELQSDLYNIQQQLV
                     QLGELTGQSQQRLTEMRTQLEARSEQIASSAADTGRAATPAVASADQMYEASLAQLRR
                     GSTATARSGLREMLKTYPTSDRAGDALYFIGQSYAAENTDSAIAYYNQVVQKYPTSSR
                     AGSALYNLGLLAERRKETKKAREAYQRVIQKYPQSDEAALARDRLKALGR"
     gene            complement(1217..1792)
                     /gene="pal"
                     /locus_tag="VGQ24_09035"
     CDS             complement(1217..1792)
                     /gene="pal"
                     /locus_tag="VGQ24_09035"
                     /inference="COORDINATES: protein motif:HMM:TIGR02802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HEV8455022.1"
                     /translation="MRAPSLLMLLAASAFAVACGGKAAPEEPAPEPTPAPAPAPAPAP
                     VDDSAERDRLERERLAREADERARAVSADLAAMINFDYDQAVVRPADQETLNRKAAIL
                     VANPGVKLRISGHADERGSDEYNLALGNRRAAAAKRYLEGKGVDGSRIEVISYGEERP
                     LNPGSDESAYAQNRRDEFEVTAGGDKLSAPQ"
     gene            complement(1806..3134)
                     /locus_tag="VGQ24_09040"
     CDS             complement(1806..3134)
                     /locus_tag="VGQ24_09040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455023.1"
                     /translation="MKRFFFLLLPMFAAAGTLAAQDTSRVDQGVRVGVDYRPGVRPGL
                     VVLPSPGLDSVRSIVQRDLDYTDRYEMVTVADVSSGPVTGRGAAEAGGGVNYGLYKAL
                     GAEFAVELAESPGGVTVRLHDLNAGRVRNQQTLGLPSSTAPDFRLEVHRLSDEIARWA
                     SGIAGAAASRLMFVSGGRVYRADSDGEAIAPVTPGGQTALSPVWSPDGQRMAYTQLGE
                     GRGGVLVQTLSSGATFMVPGSQTALNITPAFAPDGRTLAFAHSDERGTDIYTANVIDR
                     CCAQRLTVGRYADNLSPTFSPDGRRIAFISTRAGPPQLYVMAADGTDQELLAPLDFGA
                     TGSSNAPEWSPDGASVVFHREVAGSPQIFLVDVGARRVRQLTSSGRNEDPTWAPDGRH
                     VAFISDRSGRRQIWIVDTETGRVRQLGTPGAARLPSWSRRLGRTTVVPNP"
     gene            complement(3131..3859)
                     /locus_tag="VGQ24_09045"
     CDS             complement(3131..3859)
                     /locus_tag="VGQ24_09045"
                     /inference="COORDINATES: protein motif:HMM:NF024503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB C-terminal domain-containing protein"
                     /protein_id="HEV8455024.1"
                     /translation="MRIREPSQTPGRVAGLVGTFVVHAAAVLFLVAAVKPTRASPPSY
                     AVELVAAPAPTTKRLAREALPAPPPEEKPAPPPPKPAPPQKDKAAPVTPKPPKPKPAA
                     PAPTPPAPAEPNREPSPKTAAPAVPAPGETPSTGTDVATIKTPGLAFPFPEYLRNIVT
                     QVYQRWDRASAKQSNFAEISFLILRDGSVRDIRFVTRSGSFAFDIDAQGAIEAAGNSR
                     AFGQLPDGWEADVLPVSFYFKPTR"
     gene            complement(3856..4287)
                     /locus_tag="VGQ24_09050"
     CDS             complement(3856..4287)
                     /locus_tag="VGQ24_09050"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEV8455025.1"
                     /translation="MAAGLGGGLGSQRGELPLMADVNVTALVDVMLVMLITFMITAPL
                     MQGGVDVELPRAEARPLSPKEGMVVSVNRNGRIFVDQTPVSYSDFRVTFRSLVATRKP
                     SGVYLQADARVPYGDVVRVLAIIRTAGVQNVGLVAAEEESP"
     gene            complement(4288..5001)
                     /locus_tag="VGQ24_09055"
     CDS             complement(4288..5001)
                     /locus_tag="VGQ24_09055"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEV8455026.1"
                     /translation="MIQQTGGATPQSSLELVLSASPETKIVLVILTVFSLVSWFIIIL
                     KWWQFRKLNRQADRFFREMERTTRLQDAYKAVMKLPPSPYNRLFREAITFYSELRPGA
                     LREDRDADRSSLTMTQLEALKMVLGKEVAAERDLLGHYIPWLATIGSVGPLLGLTGTV
                     FGIMSAFIGIASKGSGNLSAVAPGVAEALVSTAAGLLAAIPAVIAYNLFVNRVRLFAG
                     ELEGFANELIGTMAREGLV"
     gene            complement(4998..5945)
                     /locus_tag="VGQ24_09060"
     CDS             complement(4998..5945)
                     /locus_tag="VGQ24_09060"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEV8455027.1"
                     /translation="MSGKVLVTGGAGFIGSHIAEAYLREGWEVVVLDDLSRGREANVP
                     KGARLVRGDIRSPDARRTLATGNFDVLNHHAAQIDVRVSVDRPAFDSDINVVGFVNLL
                     EGAGEGGVKRVVFASSGGVVYGDPEVIPTPETASKAPISPYGVSKLAGEYYLRALGAL
                     RGFEGIAMRYANVFGPRQDPKSEAGVVSIFVSRLLAGQPLVVFGDGRQTRDYVFVKDV
                     ARANVLASKLRAPSGDIDAPAFNIATSIQRSVLELADSVGEVMRQKPTIEFAAPRAGE
                     LFRSALDVNKAKTILGWTPQHVFEDGLRELVDWFKKEAR"
BASE COUNT         1111 a         2070 c         2040 g         1019 t
ORIGIN      
        1 ggcagctcga acgagagccc cagcgccaga gttacctgaa gcacgaaccc gaagtacgca
       61 tcgtaggtga tgaagggggc gatggcttcg gtttgaaagc tgaacaagac ccgcagggcc
      121 tggggcacca caaagaggta ggcgagcacc aggccgacga agaggccaag cttgaacacg
      181 atcatcaccg gctcggtggg gctggtaacc accagcttgc ccccggtgag atatggtgcg
      241 atcggcgcct tcaggaggct gacgagttga aaccgctgga ccagccacag cccaagcgcg
      301 catcccagaa ccaccgcagc gagcgaccgg agaatgcggg agcgcagttc ctcgagatga
      361 tcgaggaagg gcatttcccc agaagtaccg gtcatgaagc gaaacgcccg ggcttagcgc
      421 ccgagcgcct tcagtcggtc acgggccagg gccgcttcgt cggactgagg atatttctgg
      481 attacacgct ggtaggcttc cctggccttc ttggtttcct tccggcgttc ggccaggagg
      541 cccagattgt acaacgccga tccggcacgc gaggaagtgg gatacttctg caccacctgg
      601 ttgtagtagg cgatggcgga atcggtgttc tcggcagcgt agctctgtcc aatgaagtag
      661 agcgcatcac cggcccggtc actggtggga tacgtcttga gcatctcccg cagaccggag
      721 cgggctgtgg cggtactccc ccgccggagc tgcgccagag atgcctcgta catctgatcg
      781 gctgacgcca cagcgggcgt ggccgcccgg ccggtatccg cggcgctcga tgcgatctgc
      841 tcgcttcggg cctcgagttg ggtgcgcatt tcggtgagcc gctgctggct ctggccagtc
      901 agctccccca attgcaccag ctgctgctgg atgttgtaga gatcgctttg gagctcgccc
      961 cggagctggg ccaccgactt ccgggtggac gagagtgaat ccatgattcg ctgctgcacc
     1021 tggatcagct cggcgagctg agccgcccgg gcagaatccc gccgggcggt ttccgccttg
     1081 aacaaggcga tgtcgtcctg cacccgctgg atgtcgccct tggtgataca gccgccgagc
     1141 agcccgagac ccacaccgac ccaggccccg cgccgtagcc aagggaccag caagcgagca
     1201 gccgagaggt ggtgtctcac tggggcgcgc tgagtttgtc gccacccgcc gtcacttcga
     1261 actcatcgcg gcggttctgg gcgtaggcgc tttcatcgct gcccgggttg agcggccgct
     1321 cctcgccata ggagatcact tcgatgcggg acccgtccac gcccttgcct tcgaggtagc
     1381 gcttggcggc agccgcgcgc cggttgccca gggccaggtt gtattcgtcg gaaccacgct
     1441 cgtcggcgtg gccgctgatc cgaagcttga caccggggtt ggcgaccaga atggcggcct
     1501 tccggttcag cgtctcctgg tctgccgggc ggaccacggc ctgatcgtaa tcgaagttga
     1561 tcatggcggc caagtccgcg gacaccgccc gggctcgctc atcagcctct ctggccaacc
     1621 gctcccgctc caggcgatcc cgctcggcgc tgtcatcgac cggcgcgggg gccggtgccg
     1681 gcgcgggcgc gggcgttggc tcgggcgcgg gctcctccgg agcggccttt ccaccgcagg
     1741 cgacggcaaa cgcggaggcg gccaagagca tcagcagaga tggtgcacgc atcatgactc
     1801 cgagatcatg ggttgggaac gacggtggtt cgcccgaggc ggcgcgacca cgacggaagc
     1861 cgagcggcac ctggtgttcc cagttgccgg actcggccgg tttcggtatc gacgatccag
     1921 atctggcggc ggccgctgcg gtcggaaatg aaggcgacgt gccggccatc gggcgcccag
     1981 gttggatctt cgttcctgcc ggacgacgtg agctgccgca cccgccgagc ccctacgtca
     2041 accagaaaaa tctgcgggct tccggccacc tcgcgatgga atacgacgct ggccccgtcc
     2101 ggagaccact cgggagcatt cgaacttccg gtggcgccga aatctaacgg cgccagcagc
     2161 tcctgatcgg ttccatccgc agccatcaca tacagctggg gcgggccggc ccgcgtcgag
     2221 atgaacgcga tgcgccgccc atctggcgaa aacgttgggc ttaagttgtc ggcatagcgt
     2281 cctacggtca agcgttgcgc acaacaacga tcgatcacat tcgcggtgta gatgtcggtg
     2341 ccgcgctcgt ccgagtgcgc aaatgccagc gtgcggccgt ccggcgcgaa ggcaggtgtg
     2401 atgttgagcg cggtctgcga gccgggtacc atgaacgtgg cgccactcga gagggtttgc
     2461 accaggacgc cgccgcggcc ctcgcccagc tgagtgtagg ccatccgttg accgtcagga
     2521 gaccaaaccg gcgagagcgc cgtctggccg cccggtgtca ccggcgcgat cgcctcgcca
     2581 tcgctatccg cgcggtacac ccgtcccccc gacacaaaca tcaaccggct cgccgccgcg
     2641 ccggcaatgc cgctggccca ccgcgcgatc tcgtcggaca gccggtgcac ctccaaccgg
     2701 aaatcggggg cagtgctgga ggggagcccc agggtttgct ggttccggac tcgcccggcg
     2761 ttcaggtcat gcaggcgaac ggtgacaccg ccgggggact ctgccagctc gaccgcgaac
     2821 tcagcgccga gcgccttgta caggccatag ttgaccccgc ctccggcttc cgcggccccc
     2881 cgccccgtga cggggccgga cgagacatcg gccaccgtaa ccatctcgta gcgatcggtg
     2941 taatcgagat cgcgctggac gatggagcga accgagtcga gacccgggct gggcagcacg
     3001 accagccccg gcctgacgcc ggggcggtag tccacgccga cccggacacc ctggtccacc
     3061 cggctggtat cctgggcggc gagagtgccg gcggcggcga acatcggaag cagcagaaag
     3121 aagaatcgtt tcatcgcgtt ggcttgaagt agaagctgac gggcaatacg tccgcctccc
     3181 acccgtcagg gagctggccg aaggctcggc tgttgcccgc ggcctcgatg gcgccctggg
     3241 cgtcgatgtc gaaagcaaag cttcccgagc gggtcacgaa ccgaatgtcg cgcaccgagc
     3301 cgtcccgcag aatgaggaag ctgatctcgg cgaaattgct ctgcttggcc gaggcccggt
     3361 cccagcgctg gtacacctgg gtcacgatgt tccgcagata ctcgggaaag gggaacgcca
     3421 gacccggtgt cttgatggtc gcgacgtcgg ttcccgtgct cggcgtttcg ccgggggccg
     3481 gcacggctgg agccgcagtc ttgggcgaag gctcccggtt cggctccgcc ggagcagggg
     3541 gcgttggggc cggcgcggcc ggcttcggct tcggcggctt cggggtcacc ggtgccgcct
     3601 tgtccttctg aggcggcgcc ggtttcgggg ggggaggggc cggcttctcc tccggaggtg
     3661 gagccgggag ggcctcacgc gccagccgct tcgttgtcgg cgctggggcc gcaaccagct
     3721 cgaccgcgta cgagggcggt gaggcccggg tcggctttac ggcggccacg agaaagagga
     3781 ctgccgctgc gtgaaccaca aacgtcccga ccagaccggc gaccctgccc ggcgtctggc
     3841 tgggctcacg gatcctcaag gcgattcttc ctcggcggcg accagcccca cgttctgcac
     3901 tccggccgtg cggataatcg cgaggacccg cacgacgtcc ccatagggca cccgggcgtc
     3961 cgcctggagg tacaccccac tcggcttacg cgtggccacc agtgagcgga aggtcactct
     4021 gaagtcgctg taggataccg gcgtctgatc gacgaagatt cgaccgtttc gattgaccga
     4081 caccaccatc ccctcctttg gggagagcgg ccgagcctcg gcgcggggca gctcgacatc
     4141 cacgcccccc tgcatcaacg gtgccgtgat catgaaagta atcaacatta ccagcatgac
     4201 gtccaccaac gcggtgacgt tgacatccgc catcagggga agctcgcccc gctggctacc
     4261 gagcccacca cccagtcccg cagccattta aaccagccct tcccgggcca tggtaccgat
     4321 cagctcattg gcgaacccct caagctcacc ggcgaacagc cggacccggt tcacgaaaag
     4381 gttatacgcg atcaccgcgg ggatggcagc cagcagtccg gcggcagtcg acaccagcgc
     4441 ctcagccaca ccgggcgcca cggcggagag attgcctgat cccttggagg cgatgccgat
     4501 aaaggcactc atgattccga agacggtgcc ggtaagaccg agcagcggac ccacggagcc
     4561 gatggtcgcc agccagggaa tgtaatgccc cagcagatcc cgctccgccg cgacttcctt
     4621 gccgagcacc atcttcaagg cctcgagctg ggtcatggtg agcgagctgc gatccgcgtc
     4681 gcgatcctcc cgcagcgctc ccggacggag ctcggaatag aaggtgatcg cctcccggaa
     4741 gagccggttg tacggcgagg gcggcaactt catgaccgcc ttataggcat cctgcagccg
     4801 ggtagtgcgc tccatctccc tgaagaagcg gtcggcctgg cgattgagct ttctgaactg
     4861 ccaccacttc aggatgatga tgaaccacga taccagggag aaaaccgtga ggatgacaag
     4921 gacgatcttg gtttcggggc tcgcggagag caccagctcg agcgaggatt gcggagtcgc
     4981 accgccggtt tgttgaatca cctcgcctcc tttttgaacc agtccaccag ctcgcgcaac
     5041 ccgtcctcga aaacgtgctg cggagtccat cctaggatcg ttttggcctt gttcacgtcg
     5101 agcgcgctac ggaagagctc ccctgcccgc ggagcggcaa attcgatcgt gggcttctgg
     5161 cgcataactt cgcccaccga atccgccagc tcgagcacgc tgcgctggat cgacgtggcg
     5221 atgttgaagg caggcgcgtc gatgtcgccg cttggggcgc gcagcttgct ggccaggacg
     5281 ttggctcgag ccacgtcttt gacgaagaca tagtcacgag tctgccgacc atcaccgaac
     5341 accacgaggg gctggcccgc aaggagccgc gagacgaaga tcgacaccac gcccgcctcg
     5401 gacttgggat cctggcgcgg gccgaacacg ttggcgtatc gcatcgcgat accctcgaag
     5461 ccccgcaggg cacccagggc gcggaggtag tactcgccgg ccagcttgct caccccatag
     5521 ggtgagatcg gagccttcga ggctgtttca ggggtgggaa tgacctccgg gtcaccgtac
     5581 accaccccgc cgctgctggc gaagaccact cgcttgaccc caccctcccc tgctccctcg
     5641 agcaggttga cgaagcccac cacgttgatg tcgctgtcga aagcgggccg gtccaccgag
     5701 acccgtacat cgatctgcgc cgcatgatgg ttcaatacgt cgaaattgcc ggtggccagc
     5761 gttcgcctgg cgtcaggtga ccggatatcc ccgcgtacca ggcgcgctcc cttgggaacg
     5821 ttcgcctcac ggccgcggga gaggtcgtcc agaaccacga cctcccaacc ctcgcggaga
     5881 tacgcctccg cgatgtgaga cccgataaac ccggcaccgc ccgtcaccag gaccttgccg
     5941 ctcatgctat gcctgccggc attgaacctc tctcaccgtg gtttgagtcg aagggccgcc
     6001 atctcggagc gccccgcaat atagaagcgg gtaggaaggc gggaaccggt ggggaggccg
     6061 ggcagcgggg ccgcgggcgg cggctgggca gcggggcaga atcactaaga acgatgagaa
     6121 cagagaggag ccggacctga tcatcaggtt tcggctcctc agtacttctc ctgccccgct
     6181 gccccgcggc cccgctttac gacggcagct ttgccacctg cagaacgtcg gtacccggcg
//
LOCUS       DASYRV010000343         4664 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3663101, whole genome shotgun sequence.
ACCESSION   DASYRV010000343 DASYRV010000000
VERSION     DASYRV010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4664
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3663101"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            319..1299
                     /locus_tag="VGQ24_09065"
     CDS             319..1299
                     /locus_tag="VGQ24_09065"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8455028.1"
                     /translation="MLRALARRAIAGLAVIIGVVTLMFFLLRLAPGDPALLLVGPTAT
                     QEQLSAQRRALGLDRPIVEQYAAWVRQFVRGDWGTSIATGRSVRVMIGDAWPATVSLV
                     GLSLVLSYLIGIAVGAVQAARGGRLDTTLSVVTVTLFALPGYWLGLMLVMVFTYWLRA
                     LPAFGAAGFDADFLSGWDRLLDRLRHLALPLATLTLIGIGGTARYVRGAMLDVKGAPY
                     VTIAHAKGLSPIQVTVRHVLRNALIPVLTLLGLSLPALFSGAVFIEAIFAWPGVGRIM
                     VEAVGARDYPVIMAATAVSAILVVLGNLLAEGLAAWADPRLRTAQVSGAA"
     gene            1299..2141
                     /locus_tag="VGQ24_09070"
     CDS             1299..2141
                     /locus_tag="VGQ24_09070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8455029.1"
                     /translation="MRYRHSLVHDPRARFGFAVLAVAVLVALLAPLLAVDPSLQRDIV
                     ATRFLPPLSADVHGTFHLLGTDRFGRDVWARLAYGARVSLGVGVLAVLLSVAIGLAVG
                     AAAGFWPRRLGVVLLGLTDFALALPRVVLLLLLASLWQPSAALVIVVLGLTGWMTIAR
                     LVHGEVRALAARPFVESAVALGVRGPRVLVRHILPNALTPVIVAAALGIGNAIMLEAG
                     LSFLGLGVQPPTPSWGNLIASGRDTLVNAPWVATAPGVALVLVVVGATLLGDALRDRL
                     DPGG"
     gene            complement(2146..2649)
                     /locus_tag="VGQ24_09075"
     CDS             complement(2146..2649)
                     /locus_tag="VGQ24_09075"
                     /inference="COORDINATES: protein motif:HMM:NF040422.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6438 domain-containing protein"
                     /protein_id="HEV8455030.1"
                     /translation="MIRILAAAVLLALGSCARNEAASSPGDKSSPAAASSPAITLERT
                     ACFGSCPVYTISVSRSGEVQYEGRAHVRKLGAATGRVPRGRVDALLSELERAGYFTFA
                     ERYTSPEPACGRYATDAPSVITSVTLRGRTKRITHDYGCGGAPGALVVLERRIDEALN
                     SGQWTGR"
     gene            complement(2646..>4664)
                     /locus_tag="VGQ24_09080"
     CDS             complement(2646..>4664)
                     /locus_tag="VGQ24_09080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455031.1"
                     /translation="VYTVTASDVTVGAAPYQASPASQTVAVVRSGSPATASVTYTTPT
                     GSIALTISGLGTSSNAVVTVTGPGSYNQSVTSTRTLSGLTPGTYTIDAQNVTSSCGST
                     FSVSPTTQNVTVTASATANATVSYSPSAGGTVNLCIDGMYVTQSAQNYAGTVPLVQNR
                     NGLLRVFVVADRASTPAATVQVVLRIYDPLGAQSTVTLQPPVGMVYVPTAPDESALNS
                     SWNHPVPGGTIQAGFKIEAEVLPGTVSESDTTDNVLGPTTPTVRTVPTLNVTFVPVVQ
                     KGIPVGRRVPGNVTTGNAASFMQVTQDMHPIEAYNAVVHAPYTTMTFDTLQDDNGNNA
                     WGTILDEIRVIQVSEGTSRYYYGVAKVSYSNGVAGVAYVSNPGTFPPQVARAALGWDY
                     IPSGSIVAAHELGHNWARNHAPCGGPSGVDLNYPQADGTTGGYGYDVSTGTVEPPTSS
                     DIMGYCDPKWISEYTYSAVLNYLSPMPPLVQRGPISMAVQPCLVVWGHIRNGELVLEP
                     AFQVNTRPSLPAQAGPYSLQGKASDGASVFSLSFVPSEIADAPGSQQGFAFAVPMSSA
                     QASRLASLHLSGRGRPAVLAAATTVAGAQPATQSETVVVRRLGSGSVGLRWDARAHPM
                     IMVRDTETGEVLSLARGGDVQLSTHKGQVDLVISDGVKSRVKRVTVAP"
BASE COUNT          694 a         1525 c         1571 g          874 t
ORIGIN      
        1 gcgaatagga cggtggcgcc ccgccgatcc gcagtcgatc cgcaggcgga cgtcgtggca
       61 gcgaggaaca ggattgcgat tcgcgccgga agcacggcgt attctatcta cgtcgggctc
      121 gaagctgcag cacgttgacc cacccaaccg cgcagacggt tgggcatggg ccctccggca
      181 ggctccatga caaccgctcc acacttcccc tgggagcctg cctgcgaacc catacccacg
      241 ccgtccgctc cccccgctgg ttggggggag gggtgccagg gaaaccggtg agtcccgacg
      301 gctgagtaca ttcaacccat gctacgagcc ctggcccggc gtgcgatcgc cggcctcgcg
      361 gtgatcatcg gcgtcgtcac tctgatgttc tttctcctcc ggctcgcgcc gggcgacccg
      421 gcgttgctcc tggtcggacc gaccgcgacg caagaacagc tctccgccca gcggagggcc
      481 ttggggctcg atcggccgat cgtcgagcag tacgcggcgt gggtccggca gttcgtgcgg
      541 ggcgactggg gcaccagcat cgcgaccgga cgctcggtcc gcgtgatgat cggcgacgca
      601 tggcccgcta ccgtgagtct ggtcggcctc tccctggtgc tgagctacct catcggcatc
      661 gccgtggggg cggtgcaggc ggcgcggggt ggccggctcg ataccaccct ctcggtcgtg
      721 accgtgaccc tcttcgcgct cccgggttac tggctcggcc tgatgctggt gatggtcttt
      781 acctactggc tccgggccct gcctgcgttc ggcgccgcgg gcttcgacgc cgatttcctc
      841 tccggctggg accggctact cgaccggctc cggcacctcg cgcttcccct ggcgaccctc
      901 acgctgatcg ggatcggagg cacggcgcgg tacgtacgcg gggccatgct cgacgtgaag
      961 ggcgcgccct acgtcaccat cgcccacgcg aagggtctct ctccgattca ggtcaccgtc
     1021 aggcacgtgc tgcgtaacgc gctcattcca gtgctcacac tcctgggact gtcgcttccg
     1081 gcgctcttct ccggtgcagt gttcatcgag gcgatcttcg cctggccggg ggtggggcgg
     1141 atcatggtag aagccgtggg ggcccgggat tatcccgtga tcatggctgc caccgcggtg
     1201 agcgccatac tcgtcgtact cggtaacctg ctcgccgagg gactggccgc ctgggcggat
     1261 ccccggctca ggaccgctca ggtcagcgga gcggcctgat gcgttaccgt cattcgctgg
     1321 tgcacgaccc acgagcgcgg ttcggctttg ccgtgctcgc cgtcgcggtt ctcgtcgcgt
     1381 tgctcgctcc gctcctcgcc gtcgatccgt cgctccagcg cgacatcgtg gccacccggt
     1441 tcctgccgcc gctcagcgcc gatgtccacg gcacctttca cctgctcggc accgaccggt
     1501 tcggccgcga cgtctgggcc cgtcttgcct acggcgcgcg ggtgtctctg ggcgtgggtg
     1561 tgctggcggt tctcctctcg gtggccatcg ggctggcggt gggggcggcg gcggggttct
     1621 ggcctcgccg gctgggcgtg gtcctcctgg ggctcaccga ctttgcgctc gccctacccc
     1681 gggtggtgct gcttctgctg ctcgcctcac tctggcaacc gagcgcggcg ctcgtgatcg
     1741 tggtgttggg gctgaccggg tggatgacca tcgcgcgact ggttcacggg gaagttcgcg
     1801 cgctggccgc ccggcctttc gtcgaaagcg cggtggcgtt gggcgtgcgc ggaccgcggg
     1861 tgctggttcg tcacatcctg cccaacgcgc tcacgccggt gatcgtggcc gccgcgcttg
     1921 ggataggaaa cgccatcatg ctggaggctg gattgtcttt cctggggctt ggagttcagc
     1981 cgccgactcc gtcctggggg aacctgatcg cctcggggcg ggatacgctg gtcaacgcac
     2041 cgtgggtggc gactgcgccc ggcgtggcgc tggtcctggt agtggtggga gcaacactgt
     2101 tgggcgatgc acttcgagac cgactggatc cagggggtta gcgggttagc ggccggtcca
     2161 ctggccggag ttcaatgcct cgtcgatcct ccgttcgagt accacgagcg cgcccggcgc
     2221 tccgccgcat ccataatcgt gggtgatccg cttggtgcgg ccccgcagcg tgaccgatgt
     2281 gatgacagaa ggtgcgtcag tggcgtaccg cccgcaggcg ggctccggcg atgtgtaccg
     2341 ttcggcaaag gtgaagtagc cagcccgctc cagctccgac agtaacgcgt cgacccgccc
     2401 ccgtggcacc ctgccggttg ctgctcccag cttgcgtaca tgcgccctgc cttcgtactg
     2461 cacctcgccg gagcgcgaga ccgagatcgt gtagaccggg cagctgccga aacaggcggt
     2521 gcgctccagc gtgatcgccg gtgaggacgc agccgctggc gaggatttat cgcccggcga
     2581 cgaggccgct tcgttccggg cacaggagcc gagcgccagc aacacagccg cggccaggat
     2641 cctgatcatg gggccaccgt cacccgcttg actctgctct tcacgccatc cgaaatcacc
     2701 agatccacct gtcccttatg ggtcgagagc tgcacatccc caccccgcgc gagtgacagc
     2761 acctcgccgg tctcggtatc ccggaccatg atcatcgggt gcgctctggc atcccaccgg
     2821 agccctacac tgccggaccc aagccgccgg acaacgaccg tctcggactg ggtggccggc
     2881 tgggcgccag caaccgttgt ggcagccgcg aggactgcgg gccgtcccct accgctcaga
     2941 tggagactcg cgaggcggga ggcttgtgcc gatgacatgg gaacggcgaa ggcgaagccc
     3001 tgctggctcc ccggcgcatc ggcgatctcg ctgggaacaa aggagaggct gaagaccgag
     3061 gcaccatcgg aggctttacc ctggagggag tacggccctg cctgagccgg gaggctggga
     3121 cgagtgttga cctggaaggc cggctcgagc acgagctcgc cgtttcggat gtgcccccag
     3181 accacaaggc agggttgaac agccatgctg atagggcccc tctgcaccag cgggggcatg
     3241 ggactgaggt aattcaacac ggcagagtaa gtatactcgc tgatccactt cggatcgcag
     3301 tatcccatga tatcgctgct ggtgggcggc tcgaccgttc cggtggacac atcgtagccg
     3361 tagccgccgg tcgtgccgtc cgcctgggga tagttgaggt ctacgccgct gggaccgccg
     3421 cagggcgcgt gattccgggc ccagttatgc cccaactcgt gggccgcaac gatgctgccg
     3481 cttgggatat aatcccagcc gagggccgcg cgggcgacct gtggcgggaa agttcctgga
     3541 ttgctgacgt aagcgacccc ggcgacaccg ttgctataag acacctttgc cacgccatag
     3601 tagtaccgcg acgtgccttc cgaaacctga attacccgga tctcgtcaag aatcgttccc
     3661 caggcattgt tgccgttgtc atcctgcagc gtgtcgaacg tcatcgtggt atacggagcg
     3721 tgaacgacgg cattgtacgc ctcgatcggg tgcatgtcct gagtgacctg catgaagctt
     3781 gcggcgtttc ccgtggtgac gttccccggg accctgcgac cgaccggtat gcctttctgg
     3841 acgacgggaa cgaaggtgac gttgagcgtc ggaaccgttc ggactgttgg cgtcgtgggg
     3901 ccaagcacgt tatccgtggt atcactctcc gaaaccgtgc cgggaagaac ttcggcctct
     3961 attttgaagc ccgcttggat cgtgccgccg gggactgggt ggttccacga gctgttcaag
     4021 gcgctctcgt cgggcgcggt cggcacatag accatcccca ctggcggctg cagggtcacg
     4081 gtagactgtg ccccgagtgg gtcgtaaatc cgcagtacca cctgcaccgt ggccgcggga
     4141 gtactcgccc gatccgctac cacgaacacg cgaagtaaac cattccgatt ctgcaccagg
     4201 ggcacagtcc cggcgtagtt ctgcgcgctc tgggtcacgt acatgccatc gatacacaga
     4261 ttcaccgttc cgccggccga agggctatac gagaccgtcg cattagcagt ggcactcgcg
     4321 gtgacagtca cgttctgggt cgtgggactc acgctaaagg tggagccgca agacgacgtg
     4381 acgttctggg catcgatcgt ataggtgccg ggggtgaggc cgctcagcgt cctggtgctg
     4441 gtcaccgatt ggttgtagct ccctggtccg gtgaccgtca cgaccgcatt gctgctggtg
     4501 ccgaggccgc tgatggtaag ggcgatgctt ccggtaggcg tggtatacgt cacggatgcg
     4561 gtagccgggg agccactgcg cacgaccgcc accgtttggc ttgctgggct ggcctggtag
     4621 ggcgcggctc ctaccgtgac gtcggatgcg gtcacggtgt agac
//
LOCUS       DASYRV010000344         2179 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_4077996, whole genome shotgun sequence.
ACCESSION   DASYRV010000344 DASYRV010000000
VERSION     DASYRV010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2179
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4077996"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..247)
                     /locus_tag="VGQ24_09085"
     CDS             complement(<1..247)
                     /locus_tag="VGQ24_09085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455032.1"
                     /translation="MRWILAHRVMARFPTLRCHPTAIWDFGYQDLDAIQLGTGVSVLA
                     FASIVVYKHSPRSPHEGRLLIGDDAVVAEGAIIRAAGG"
     gene            complement(298..1284)
                     /locus_tag="VGQ24_09090"
     CDS             complement(298..1284)
                     /locus_tag="VGQ24_09090"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEV8455033.1"
                     /translation="MVGSALRGRSVMVTGATGFLGSHLVRVLVEEAGAQVHVLVRPGS
                     SARRLKPLGDRIVRWQGDVADRASLRGGLAEARPRTLFHLAGDTTGRSRRGWEAVERG
                     IEVNLLGTLNLLRAVTETDAAVEVMIRLGGLEEYGGGPVPYSEDQREQPSSPYSASQV
                     ATTHYCQMLQRDLPFALLTLRPALVYGPDQSPDFLIPGLTVACLSGRPFAMTDGGQTR
                     DLLYVDDLVAALLLAATRRDLSGAVLNLSGGREYVVREVAEEIARLAGTPELLRVGSA
                     LERPGELYRLLGSGKLADEALGWRPRTGLLDGLRRTVEWYREHLSLFEGARP"
     gene            complement(1289..>2179)
                     /locus_tag="VGQ24_09095"
     CDS             complement(1289..>2179)
                     /locus_tag="VGQ24_09095"
                     /inference="COORDINATES: protein motif:HMM:NF020073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEV8455034.1"
                     /translation="DACRNEGLTTLGIEPAANIAAIARGKGLEVVNEFFGPATSAQIR
                     AQYGPARVISTTNTFNHIDDLHAFMEGVVTLLDSEGTFIIEVPQALTCVEQNEFDTIY
                     HEHLSVFSLASLVALGGFFGMEVVDVAPLPIHGGSMRVYLERRRDGVPSNGIAEEWVD
                     REHQAGLFKHQAYDALAGRVRRIRDELLALLRNLKGGGKRLAGYGAPAKGNTLLNYYG
                     IGPELLEFLADRNPLKQNKYSPGMHILVVSPEEIARRRPDYLLILAWNFAEEIMEQQA
                     RFRADGGRFILPIPEPRIVE"
BASE COUNT          387 a          740 c          692 g          360 t
ORIGIN      
        1 ttcccccggc ggcccggatg attgcgcctt ccgcaacgac ggcgtcgtcg ccgatgagga
       61 gccgcccttc gtgggggctg cggggagagt gcttgtacac cacgatagac gcaaacgcaa
      121 gcacgctgac gccggtaccg agctggatgg catcgagatc ttggtacccg aaatcccaga
      181 tcgcggtcgg atgacaccgg agagtcggga acctcgccat cacccggtgg gcaagaatcc
      241 atcgcacggc ccgctgccgc agtccactca gcaagattgt cagatgacgc agggggttca
      301 cggcctggcc ccttcgaaga gcgacaggtg ctcccgatac cactccacgg tccgccggag
      361 gccgtccaac aacccggttc ggggacgcca gccgagcgct tcgtccgcca gctttccgct
      421 gcccagcaag cggtaaagct cccccggccg ctcgagcgcg ctccccaccc gtaatagctc
      481 gggggttccg gcgagtcgag caatctcctc ggcgacctcg cgcaccacgt attcccggcc
      541 gccggagagg ttgagaacgg ccccactcaa atcccggcgc gtggcagcta gcaggagcgc
      601 cgcgacgagg tcgtccacgt acagcaagtc acgggtctgg cccccatcgg tcatcgcgaa
      661 cggcctcccg ctcaggcacg ccacagtaag tccgggaatc aagaagtcgg gagattggtc
      721 gggcccgtac accagcgccg gccgcagggt gagcagcgca aagggaagat cccgctggag
      781 catctggcaa tagtgggtcg tggccacctg gctcgcagaa tatggtgagc tgggctgttc
      841 ccgctggtcc tcgctgtatg gcaccggacc gccaccgtat tcctctagcc cgcccaggcg
      901 gatcatcacc tcgaccgccg cgtccgtctc ggtgaccgcc ctgagcaggt tgagcgtgcc
      961 caggagattg acctcgattc cccgctccac tgcctcccac ccgcgcctgc ttcgtccggt
     1021 ggtgtcgccc gcgaggtgga atagcgtacg tggtcgggcc tcggccaggc ctccccgcag
     1081 cgacgcgcga tcggcgacgt ctccttgcca gcggacgatt cggtcaccca gcggcttcag
     1141 ccgtcgggcc gatgaccccg gccgcaccag cacgtggacc tgagcccccg cttcctcgac
     1201 cagcacccgg acgagatgcg atcccaggaa accggtcgca ccagtgacca tcaccgatcg
     1261 tccccggagc gcactgccca ccatcggact actccacgat ccggggttcc ggaatcggca
     1321 gaatgaagcg cccgccgtcg gcccggaagc gggcctgctg ctccatgatt tcttcggcga
     1381 aattccaggc gaggatcagg agataatcgg gccgccgtcg agcgatctcc tcgggtgata
     1441 cgaccaaaat gtgcatgccc ggcgagtact tgttctgctt gagtgggttt cggtctgcca
     1501 ggaattcgag cagctcagga ccgattccgt aatagttaag cagggtattc cccttggccg
     1561 gcgccccgta cccggccagg cgcttgccgc cccccttaag gttgcgcaag agggccagga
     1621 gctcgtcccg gatgcgccga acccgcccag ccagcgcatc gtaggcttgg tgcttgaaca
     1681 ggccggcctg gtgctcccgg tcgacccact cctcggcgat cccgttggac gggacgccgt
     1741 ctcggcggcg ttcgaggtag acccgcatcg aaccgccgtg aatcgggagg ggcgcaacat
     1801 cgacgacctc catgccgaag aagccgccca gcgcgaccag cgaggcgaga ctgaaaaccg
     1861 acagatgctc gtggtagatc gtgtcgaatt cgttttgttc cacacaggtg agcgcctgag
     1921 gcacctcgat gatgaaggtg ccctcggagt cgaggagcgt gacgacgccc tccatgaagg
     1981 cgtggaggtc atcgatatga ttgaacgtgt tcgtggtgct gatgacccgg gccggcccgt
     2041 actgcgcccg gatttgggcg gaagtggccg ggccgaagaa ttcgttgacc acctccaggc
     2101 ctttgccgcg ggcgatagcc gcaatgttgg ctgccggctc gatcccgagc gtggtgagcc
     2161 cttcgttccg gcaggcatc
//
LOCUS       DASYRV010000345         2508 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1940549, whole genome shotgun sequence.
ACCESSION   DASYRV010000345 DASYRV010000000
VERSION     DASYRV010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2508
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1940549"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            415..1443
                     /gene="istA"
                     /locus_tag="VGQ24_09100"
     CDS             415..1443
                     /gene="istA"
                     /locus_tag="VGQ24_09100"
                     /inference="COORDINATES: protein motif:HMM:NF033546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEV8455035.1"
                     /translation="MYGSERHVLLRHYLEAGLTKTAIAERLGLDRSTIHRWIRAGELE
                     RDIDAEAVRYRPRPPRSSKLDPYVPLLQERLTEYPELTAIRLFAEVRAAGYAGGLSQL
                     RALVHRLRPTPPVAELVRFETPPGHQAQVDFARFVLPWGVRYALLVVLSYSRLLWLRF
                     VLRQDLRTLLTGLEAAFLSFGGVPRELLFDQMKAVITRDGRLEGGRLVTNTEFLRFAH
                     HWSFRPRACRPYRAQTKGKVERPIRYVRQSFLYSRHFAGDADLQAQAEHWLATVANVR
                     RHATTFEQPVERDERACLQPLALRPYSSLVLLPPIAPPRPKSPAVPAVAVEHRPLQVY
                     AQLTGGAS"
     gene            1440..1898
                     /locus_tag="VGQ24_09105"
     CDS             1440..1898
                     /locus_tag="VGQ24_09105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455036.1"
                     /translation="MKSASPSRRDRLRAQLADLKMPGALEALDAVLASVDAGQGTVAD
                     AIEAQRRTASGRPVWGGRRIRTRIFRQTYCAARLQTLDRGQPVSLYTVSRELGHDSED
                     MVRRVYARLGKVRHRVEAVEFRPEQWFDEIDGQLVPREGRKRAIIQAGRD"
     gene            1971..2044
                     /locus_tag="VGQ24_09110"
     tRNA            1971..2044
                     /locus_tag="VGQ24_09110"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2005..2007,aa:Arg,seq:ccg)
     gene            2087..2272
                     /locus_tag="VGQ24_09115"
     CDS             2087..2272
                     /locus_tag="VGQ24_09115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455037.1"
                     /translation="MFVPAPCPSGSVLPSDEPQAAHAVTELVKVLFEPVLHLAGTVPC
                     QTQVRVDPLHHLVRLVA"
BASE COUNT          398 a          871 c          786 g          453 t
ORIGIN      
        1 agacgccatt cgactattcg gtcttctcgg cagccgctgc agcattctta ctggcgttct
       61 gggagcctga ccgattcacg ttggacaagc ttctgaatcg attacgaaac tgagcgggcg
      121 atccgatcac gaacaacact aacttcgata gcgtgaacgc tccgcgtaat agacacagcg
      181 aattcaagga gcgagagctc gatctccagg agagccgttt gctgtccatg atgtgaccag
      241 atgccgtcgc gaagatggta gccaggccgc cttcccaata gtgtaagcgc cgagtgaata
      301 ctcctcagat ccgccaggtg aaaatgccac agatcggcag cctgttcggg tcgccgattc
      361 gctggtcggc cgaccgtggc gtcaccttgc gtctcccctc gtgcggagac gcgcgtgtac
      421 ggatcggagc gccatgtgct gctgcgccac tatctcgagg ccgggcttac caagactgcc
      481 atcgccgagc ggctcggcct cgaccgctcg accattcacc gctggatccg cgctggggag
      541 ttggagcgcg atatcgatgc agaggccgtc cgctatcgac ctcgcccacc ccggtcgagt
      601 aagctcgatc cctacgtgcc gctcctccaa gagcggctca cggagtatcc cgagctcacc
      661 gcgatccgcc tgtttgccga agtccgtgcg gccgggtacg ctgggggcct gagtcagcta
      721 agagcgctgg tgcaccggct ccgccccacg ccgccggtgg ccgagctggt gcgctttgag
      781 accccgcctg gccaccaagc ccaagtcgat ttcgcccgct tcgtgctgcc gtggggcgtg
      841 cgctacgcgc tgctcgtggt cctgagctac tcccggctcc tctggctccg cttcgtgctc
      901 cgccaggatc tccggaccct gctcaccggg ctcgaggccg ccttcctgag cttcggcggc
      961 gtgccccgcg agctcctgtt cgaccagatg aaggccgtca tcactcgcga tgggcggctc
     1021 gagggtggac ggctggtgac caataccgag tttctccgct tcgcccacca ctggagcttt
     1081 cgcccgcgcg cctgccgccc ctaccgggcg cagaccaagg gcaaagtcga gcggccgatt
     1141 cggtacgtgc ggcagagctt cctctacagc cgtcacttcg ccggggacgc cgatctccaa
     1201 gcgcaggccg agcactggct cgcgaccgtg gccaatgtgc gccgccatgc gacgacgttc
     1261 gagcaaccgg tcgagcggga cgagcgcgcc tgcttgcagc cgctcgccct gcggccctac
     1321 agctcgctcg tgctcctgcc gcccatcgcc ccaccgcggc ccaagtcccc agccgtcccg
     1381 gcagtcgctg ttgagcatcg cccgcttcag gtctatgccc agctcacggg cggtgcctca
     1441 tgaagtccgc atcgccatcc cgccgcgatc gactccgcgc ccagctcgcc gatctcaaga
     1501 tgcccggcgc cctcgaagca ctcgacgccg tcttggcctc ggtcgatgca ggccagggca
     1561 ccgtcgctga cgccatcgag gcccagcgga gaacggccag tggtcggccg gtgtggggcg
     1621 gccgtcgcat tcggacgagg atcttccgcc aaacctattg cgcggcccgg ctccagacac
     1681 ttgaccgtgg gcagcccgtc agcctgtata cggtgtctcg ggagcttggc catgactcgg
     1741 aggacatggt ccggcgggtg tacgcccggc tcgggaaggt ccggcaccgg gtcgaggccg
     1801 tcgagttccg cccggaacag tggttcgacg agattgatgg ccaactggtc ccgcgggagg
     1861 gccgcaaaag ggctatcata caggcgggca gggattagaa ttggggtccg gaaagcagcg
     1921 tccggcactg tttcccgcac tatcgcaggt tcgtaagtct aagtcattgc gggtccgtag
     1981 ctcagttgga tagagcgctt gcctccggag caagaggtcg cgcgttcgag tcgcgccggg
     2041 cccactctgg aagatcttcc cccgtcgata cttcggtgtc gcggggttgt tcgttcctgc
     2101 cccctgcccc tccggcagtg tccttcccag tgacgaaccc caggcggcgc acgcggtcac
     2161 cgagctggtc aaggtgttgt tcgagccggt actccacctc gccggaacgg tgccgtgtca
     2221 gacccaggtg cgcgtagatc cgcttcacca tctcgtccga ctggtggcct agctcgcgcg
     2281 cgaccgtgta gatcgacacc ggcgcgcctt ggcgcgggcg cggcgtcgcg atacattggc
     2341 cgcgtcatca cacgtcacat tcggtgcaac tacagctgcc gagttgcgca ctccgccggc
     2401 ggggcagcct cacgtcggcc gatgtccgtc gacgggaggt cgccgccaaa ctacaccgga
     2461 cggcctactc ctgctgacga atcatgcggc cgcctcatgc ggccgccc
//
LOCUS       DASYRV010000346         2177 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1110524, whole genome shotgun sequence.
ACCESSION   DASYRV010000346 DASYRV010000000
VERSION     DASYRV010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2177
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1110524"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..293)
                     /locus_tag="VGQ24_09120"
     CDS             complement(<1..293)
                     /locus_tag="VGQ24_09120"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEV8455038.1"
                     /translation="MRSGLWLPLFEELADPRVVARLAADAEERGWHGVFVWDQLRWRE
                     PIKQVADPWITLAAVAAATEEVMLGPMVTPLARRRPAKVARETSTLDRLSGGRL"
     gene            676..1059
                     /locus_tag="VGQ24_09125"
     CDS             676..1059
                     /locus_tag="VGQ24_09125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455039.1"
                     /translation="MSAGIAEPGGLNGYRGQVRGWTWWFGLFLGGLLVAAGIAETVRL
                     VRSGDGGLVFWFGTLVGGGILVLTGTLLLPRRPIPGCVLTTVGCLAGVLPTMWTLIVP
                     VMLVALVIASAKQAAAAMATETTPS"
     gene            1587..>2177
                     /locus_tag="VGQ24_09130"
     CDS             1587..>2177
                     /locus_tag="VGQ24_09130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455040.1"
                     /translation="MSVPGWLNPNHWLAANLSGALDENEVVVRTSRYLRLGMVGLVLG
                     LAASLFFELNRVQNIDGKWCLLGSISAYYYTPVHGFFVGTLVAIGISLFAIRGNTVAE
                     DTLLNFAGVLAPFVALVPTEKAPTNCHPVLDTTNRDLNIANNVGALFVVLGAAFIVLA
                     GLWIRGRRDPSHRLDMPTVVSGLVALAITGVALGLFW"
BASE COUNT          366 a          694 c          705 g          412 t
ORIGIN      
        1 aggcggccac cgctgagccg atccagcgtc gaggtttccc ttgccacctt ggccgggcgg
       61 cggcgcgcca gcggggtgac catggggccc agcatcacct cttcggtcgc ggccgcgacc
      121 gccgccaggg tgatccacgg atcggccact tgctttatcg gctcacgcca gcggagctga
      181 tcccacacga acaccccgtg ccagccccgc tcctccgcat cggcggccag acgcgccacc
      241 acccgcgggt cggcaagctc ctcgaacagc ggcagccaca gaccagagcg catgtcgcta
      301 cgaaagggag ccatggagtc gatcgacaag ttctttgggc cagctcaagg cgacgcactg
      361 cccgccatcg atctcgtccg gggtgattcc cagccgccga taacgccggc tcccggaagg
      421 tgatcgaacg caacggcggc gttctggaag atcagcacgg cgacaagctg cgctttgggg
      481 taccgacttc atgaccataa ccacagagca gcttcgcata ctcacatacg cgtggagggc
      541 ggcggctccg cttgcccgga tctgccgctc ttggtgcgca ctggtgccga attgctggca
      601 tcgagatttg gccgctacgc gaagaggggc gctcactcgc agcgtttggt ccgagaagac
      661 tgtgacgatt gcgagatgag cgctggcatt gccgagccag ggggtctgaa cggataccgt
      721 gggcaggtgc gcggctggac atggtggttc ggactgtttc tcggcggctt gcttgtcgct
      781 gcaggaatcg cggagacggt tcggctggtt cggagtgggg acggcggcct cgtcttctgg
      841 ttcggcacac tcgtcggcgg cggcatcctc gtcttgaccg gcacactgct cctgccccga
      901 aggccgattc ccggatgcgt ccttacaacg gttggatgtc tcgccggagt tctcccgacc
      961 atgtggacgc tcatcgtgcc tgtgatgctc gtagccctgg tgatcgcgag cgccaagcag
     1021 gccgcggccg caatggccac ggagacgaca cccagctaga agcacgcaca tggccggaga
     1081 ccatcctgca agaagtctta actagccgcg ctgagcgtgc ttgatggcgc tcatgcctgc
     1141 gagttcaggc ggtcaacgcg aggcttccgc taacgcttgt gaagcgtgtc ctgaagttca
     1201 ggggctgtcg aggtcgctcg ttgagctctt ggcgatggcg tcgaggtcgg cctggtaagt
     1261 atcccggaag tcgagacgtc tgggcacttg tgggcctggc cctccccggc aaccggccgc
     1321 agctgtttct gggggtccaa ttgtccagct cgactgcgta tgacgtgatg gtcgtcacca
     1381 agccgtcgcc gtcgaattcg taaatgtcgg ccgatgagac gacggagacg ctacgtcctg
     1441 gctccctttc cataagccaa cgaatggggg attgatcacc cgacgactgg gggattgatc
     1501 agcgccgccc gcgccggaat actgcgctat cgacttgcgg gcgcggtaac gctgacctgc
     1561 ttccgggggt agggagagta tcgggcatga gcgttcccgg gtggcttaac cctaaccact
     1621 ggctcgccgc caacctcagc ggcgccctcg acgagaacga ggtagtggtt cgaacgtctc
     1681 ggtatctccg gctcggaatg gtgggcctcg tgctgggact cgccgcgtcg ctgttcttcg
     1741 agctcaaccg ggtgcaaaac atcgacggca aatggtgcct gctcggctcg atcagcgcgt
     1801 attactacac acctgtccac gggttcttcg tcggcacgct ggtcgcgatc gggatatcgc
     1861 tcttcgcgat ccgcggcaac acggtggcag aggatacgct gctcaatttc gccggcgtgt
     1921 tggcgccctt cgtagccctt gtccccaccg agaaggcgcc gacgaactgc cacccggtgc
     1981 tggacaccac caaccgcgac ctcaacatcg cgaacaacgt cggggcgtta ttcgtcgtgc
     2041 tgggagcagc atttatcgtg ctcgccggtc tctggatccg gggtcgccgg gacccgagtc
     2101 accgcctaga catgcccacc gtggtctcgg gcctggtagc gctcgcgatc accggcgtcg
     2161 cactcgggct gttctgg
//
LOCUS       DASYRV010000347        21072 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1589742, whole genome shotgun sequence.
ACCESSION   DASYRV010000347 DASYRV010000000
VERSION     DASYRV010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 21072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21072
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1589742"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            107..1159
                     /gene="mtnA"
                     /locus_tag="VGQ24_09135"
     CDS             107..1159
                     /gene="mtnA"
                     /locus_tag="VGQ24_09135"
                     /EC_number="5.3.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF004326.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046523 -
                     S-methyl-5-thioribose-1-phosphate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HEV8455041.1"
                     /translation="MPTCIPSPIAWTPSNGVRVLDQTLLPGEEAYRDLESVDAVAEAI
                     RMLRVRGAPLIGIAAAMGVVVAAGQRGRGAAGQEALQGIKEACTLLSATRPTAVNLHW
                     ALARMLRRAERACAGGEGLRDALVAEANAIWEEDRAMCRRIGELGAALIPPGATVCTM
                     CNAGALATGGIGTALAPVYTLHESGRAPHVVGPETRPLLQGSRLTAWELTHAGVSCTL
                     IADGMIASRLRLGDIACVIVGADRIAANGDVANKIGTYGLALAARAHGIPFYVAAPTS
                     TLDLATPDGSRIPIEQRDASEVASWQGTRAAPAGVKVWNPAFDVTPAELITGIITDMG
                     IFKPSEISHSQSVVDR"
     gene            1273..2775
                     /gene="glpK"
                     /locus_tag="VGQ24_09140"
     CDS             1273..2775
                     /gene="glpK"
                     /locus_tag="VGQ24_09140"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004370 - glycerol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HEV8455042.1"
                     /translation="MASVLALDQGTTGSTALVIHQDGTVLGRGYREFTQFFPQPGWVE
                     HDPEQIFRVSVDAMAEALAGAGERPIGLGIANQRETIVLWDRRSLAPVAPAIVWQDRR
                     TSDRCRELRESGVEALLRERTGLVADPYFSATKLEWLLRDAGLRRRAERGELAAGTIE
                     SWLVAKLTGGRVHATDHTNASRTLLYDLRARDWQPELLQVFGVPRQLLPDVVRSSAPV
                     GQTNPAHLGFSLPIAGLAGDQQAALFGQGCVAPGLAKNTYGTGAFLLVLAGERVPAPP
                     PGVLATAACGASGEPAYALEGSVFIAGAAVQWLRDGLGLLTNAAESEAHARSVPDNAG
                     VHFVPAFVGLGTPYWEPEARGTITGLTRGTSRAHLVRAALEAMAYSSAELLKAMAMAE
                     RLMVPALRVDGGAAANDWLMQFQADVLGIPVERPDLVETTALGAAGLAGMALGLWHST
                     AEFHAGRRFSRFEPRMSARERQTLLAGWHRAVATALAWARSGDVSPRSTA"
     gene            2836..3249
                     /locus_tag="VGQ24_09145"
     CDS             2836..3249
                     /locus_tag="VGQ24_09145"
                     /inference="COORDINATES: protein motif:HMM:NF015085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HEV8455043.1"
                     /translation="MKAGRKFIIGAALIVGSVGFLIAEGVKETGVYFLTPSELAAKTA
                     ADPTFVENVGFKLGGKVVPGSVRRDGGARRIDFQVSDGIKTYPVTYHGLVPDTFTDAS
                     DIEVVVEGRLGGDGVIRATDVLAKCGSRYEAAPKA"
     gene            3256..5295
                     /locus_tag="VGQ24_09150"
     CDS             3256..5295
                     /locus_tag="VGQ24_09150"
                     /inference="COORDINATES: protein motif:HMM:NF027651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HEV8455044.1"
                     /translation="MTLLGQFALWAALVVGLWCVVLSFSGKWQGRPELGRTIVRSVYA
                     VCACLIVASVSLWKGLITHDFNMEYVWAYTSRNLPSAYIFSAFWAGQKGSLLFWAVVL
                     SLFASAAQFLTARRFAHLMPYVAGVTSAVITFFVSVMLFAASPFERLGFTPADGRGLN
                     PQLQNVGMVIHPPMLYLGYISITIPFAFAVAALLSRRLDTGWIHAIRKWTLVSWLLLS
                     VGITLGMWWAYVELGWGGYWAWDPVENASFLPWLTMTAFLHSVMIQEKRGMLKRWNFG
                     LIIGTFLLSIFGTFITRSGVIASVHSFTQSNVGYFFLAFLVVAAILAFTLLHTRWSLL
                     EAEVQLESVVSREAAFLFNNLLLVGIAFSVLWGTLFPILSELVRGSKITVGPPFFNRV
                     NVPLGLLLLGLTGVGPLIAWRKASTANLRRQFVTPVAAGLLTLGVLLAAGVRDFYATV
                     ALALAGFVAGTIAQEFARGIRARRRMHGESPLLAFARLIGRNRRRYGGYIVHAGILIY
                     FVAFAGMAFKREREATLKPGESVELSSPFGHTYRFTHLGVSQYEALNRIVSAATVEVA
                     KDGHPAGLMKSEKRQHVDSFKRPTFEPSTEVGIRSNLQEDLYIVYAGSVEGTEEAVYR
                     FNINPLVWWVWFGGLVLAFGGIVTMWPGGGPMMVGPRRTQAGYEVSLVAAERVSV"
     gene            5292..5882
                     /locus_tag="VGQ24_09155"
     CDS             5292..5882
                     /locus_tag="VGQ24_09155"
                     /inference="COORDINATES: protein motif:HMM:NF015853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein CcmH"
                     /protein_id="HEV8455045.1"
                     /translation="MRPRDPSSPVSRRNFLGLGLVAIPQDTLAGRGATGTLRDPSVVG
                     RSRTPTDARENDAQIQAIEQRLACNCGCTLDVFTCRTTDFSCTYSPALHREVLALRDQ
                     GKTAQQILDAFVAKYGEKALMAPKPEGVLNLTGYLLPGALIAAAGAGLLLFIGKRKAA
                     VAAATAAQGSAASAPTGAAGSDELERLRRALAEIED"
     gene            5882..6418
                     /locus_tag="VGQ24_09160"
     CDS             5882..6418
                     /locus_tag="VGQ24_09160"
                     /inference="COORDINATES: protein motif:HMM:NF024183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEV8455046.1"
                     /translation="MLVEALAAAAVGLAVLWLVLQPVLRPTGREILPVEPVDPEETPK
                     GIALTALKEIEFDKETGKLSDADYEFLKGKYTAAALDALRHESEEVASDDVEAMIAAK
                     VRALRSASAATPSNASTLPPSSNPACTTCGPRPEADAVFCSSCGRRLPSRWACDRCGA
                     ALGPDSRFCEMCGRQVAA"
     gene            complement(6616..6975)
                     /locus_tag="VGQ24_09165"
     CDS             complement(6616..6975)
                     /locus_tag="VGQ24_09165"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HEV8455047.1"
                     /translation="MLAIGVTSAALAGCFSEHEATAPVEGVCSFPVGEGVPGSTIVVI
                     QKFAFGPAEVRVRAGERVTWINCDVDAHTSTADGGQWASPLFPPADRFTQTFPTPGEF
                     SYHCEPHPFMTGHVVVE"
     gene            complement(7082..7861)
                     /locus_tag="VGQ24_09170"
     CDS             complement(7082..7861)
                     /locus_tag="VGQ24_09170"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEV8455048.1"
                     /translation="MRRVQVGGFTITEGVHRNGSELPWHHHETPTICFVLQGAFSEMW
                     RGGSIACTSSTLKITPAGERHWNRFSQGDVRGLLIEPDDALVMAIRPYSAVLDERVSF
                     HGGLVSGMARRVYDEMRRMDAAAPLAIEGLLLELVASASRMREQNGNSGRPRWLEDAR
                     DRIHVELADRPTLTGLAESVGVHPVTLARAFRRAFGCTVGEYVRNLRIERAARQLTDT
                     DRSLAEIALAEGFSDQSHFSNLFRRHTGLSPFQFRRAVRSP"
     gene            8108..8629
                     /locus_tag="VGQ24_09175"
     CDS             8108..8629
                     /locus_tag="VGQ24_09175"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HEV8455049.1"
                     /translation="MNHFPLRKIAIAALFPIVAACGDDGPSSEATSFTAALSGANEVP
                     AVTTPATGTATLSVSNNQITYTISATDLQNAVLGHIHLAPAGQNGDVRLNLCGTGDPQ
                     PVCASGPGTGVVATGTNGTTVGDPPITFEELLSAMRTGGAYVNVHTSAPGCTQGQPGC
                     NPGGEIRGQIVAN"
     gene            8684..9094
                     /locus_tag="VGQ24_09180"
     CDS             8684..9094
                     /locus_tag="VGQ24_09180"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HEV8455050.1"
                     /translation="MKWGHLIAVVAAVMLGCSSDGGLSAPGDGANSGPTVTVRNNLFD
                     PASLNVAVNSTITWVWNSGGVEHNVTFQDGANSGNRSSGSFPRTFQTAGTYAYMCTIH
                     GAQGMTGVVTVGGGTGGGGGGGGGGGGGGGGYGP"
     gene            complement(9169..9780)
                     /locus_tag="VGQ24_09185"
     CDS             complement(9169..9780)
                     /locus_tag="VGQ24_09185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455051.1"
                     /translation="MIMAAGLLVRALITAAVGASFLVSPAVGQWMVGLDVGADRFWGG
                     SEEIAPEHRSFRPYRPTTFGATLERSFGSGGVGLRLLYAGASLALEGSDAVVAAKGVF
                     KVYSASPEVSYRIASVGSSSQVLLRVGPLFEVWSIVDEKSRTRIGIQGAASLGIPLGG
                     RFAGTLSAGAALIPSPFEDGELQGFDLRALWRRRFAAGLQYRL"
     gene            complement(9777..11003)
                     /locus_tag="VGQ24_09190"
     CDS             complement(9777..11003)
                     /locus_tag="VGQ24_09190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455052.1"
                     /translation="MSRRIRLPLFALAAALAACDRPAPTANEEAAPLPSAVSPNARSS
                     LERAAMDRLARRLALALIDPAFRATLKAELDQSPFVEHKLQLQSFLRASNGRALKEVA
                     RLSGTAEATVEADANQAIPLEIYFPVPAHRASWTGGPGLLVASAREDREVPLAYDVSG
                     RRQVLSPDAPPGTPVLAMVPVETDFSRLAGDAAPMECTTCGGGGGGGTTSAPPAGLYM
                     TYAHFVQDFEGWFKGDPEFEVHILGQSGATDSLKDYQCAGGAAGGYYHFDQNNLDWTG
                     SALLFTQAQLNNYRMAHPDQNVRIVALEDDDTGCVIKFDGNRFKNLVATLQAQYPNLT
                     GAKDTSSSTLVKYVKRANALQKILSAAYSFITTKDDLIGNAIEDVVVGQSYPGANWIV
                     KGENSVTNGWLKLEMR"
     gene            complement(11099..11581)
                     /locus_tag="VGQ24_09195"
     CDS             complement(11099..11581)
                     /locus_tag="VGQ24_09195"
                     /inference="COORDINATES: protein motif:HMM:NF024586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEV8455053.1"
                     /translation="MRDEHRPKQELVHEVTGLRKQILDLKDAMTDRRRVEDALRAAVA
                     LLHTLIDNAPAGLCLFRRDGTLLTANRPFAQMLGYKSPAELQRVGGVLGVFASPEEQA
                     RLLGSPCGGPQGVLFRNKSGTHSSLEVMAAAFDDHDYAVLVVFEQLSPQPPAFLSPPA
                     "
     gene            complement(11627..12664)
                     /locus_tag="VGQ24_09200"
     CDS             complement(11627..12664)
                     /locus_tag="VGQ24_09200"
                     /inference="COORDINATES: protein motif:HMM:NF041359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine aldolase family protein"
                     /protein_id="HEV8455054.1"
                     /translation="MVAVDLFSDTVTRPTAAMRRFMCEAEVGDEQLREDPTVNLLQET
                     VAELLGKEAALFLPSGTMCNQVAFAVHCRAGDEILLQEFGHPLLYEVGGPAAMVGAVL
                     RPLTGPRGLYTAGQVRDAIRPPVYFMPRTRAVSVEQTSNVAGGVCWPLQQIEAVCETA
                     HAAGLVAHMDGARLLNAVVASGTSARAFAAPFDSVWIDLSKGLGAPMGAVLAGSQAFI
                     TDAWRFKQRFGGAMRQAGIMAAGGLYALRHHVDRLAEDHERARRLASGLATITGVAIE
                     PDRVETNIVIFDVSRTGITGEAFGARTLASHGVRFSVLGRSTVRAVTHLDIPSGGIER
                     ALEAARAAVSV"
     gene            complement(12658..14361)
                     /locus_tag="VGQ24_09205"
     CDS             complement(12658..14361)
                     /locus_tag="VGQ24_09205"
                     /inference="COORDINATES: protein motif:HMM:NF028259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455055.1"
                     /translation="MTTASVVQPSLWTVLTPKWRSVLARLRQEQSSAGGRVLLLAIVA
                     LVFWGAVFGIAYRVLNYFRSVEEIGNLMAGKVLGVILLVFLSILLLSNIITALSTFFL
                     AKDLDLLVAAPIGGSRLYLSKLAETIVHSSWMVGLLALPIFTAYGIVYRGGPWYPVVA
                     LAAFLPYLVIPAVVGTAITLILVNIFPARRTRELLGLLATGTIVIAVVALRFLRPEQL
                     AQPEGFKNLVDYLAVLRTPTSPLLPSEWTAAMIMNWLLHVGDPWPIAKLWGVAPVAVA
                     LGALLHRWLYRQGFSKALEGAERKVRRPLRGPVAGVLRFLPPSKREFILKDLRLFFRD
                     NTQWSQLILLAVLLMVYLFNIKSLPLHSGERVPFRLVTMISFLNLGLAGFVLSAVAAR
                     FIFPAISLEGRQMWLLRSSPLDPQAMLWSKYWIGTVPLLVLALVITVFTNWLLHASVF
                     MMGVAVGTIVLYTLAASALALSFGALYPQFGTENAAQIPTSFGGLVYMMSSLSLLAAI
                     IMVEAGPVTDQLRIERFTYPSTNTTAELAAAGVIVVLTCLAATIVPLRMALRTIERME
                     W"
     gene            complement(14366..15124)
                     /locus_tag="VGQ24_09210"
     CDS             complement(14366..15124)
                     /locus_tag="VGQ24_09210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEV8455056.1"
                     /translation="MIRLVQLTKRYGKFTAVDGIDLVIPSGDLFGFLGPNGAGKTTTF
                     RMIAGILQPTSGTVEIGGIDIIRRPLEAKKRLGFIPDRPFVYDKLTGGEFLRFAAALY
                     GQQGPAIERRIDELLELFELSRWKDELTETYSHGMRQKLIISGALVHRPEVIVVDEPM
                     VGLDPKSARLLKDLFRQFVDRGGTVLMSTHTLEVAETMCDRIAIVHRGKIAAHGTMAE
                     VQEQTASENLGLEDLFLKLTGGLRDQQLDTILEA"
     gene            complement(15121..15615)
                     /locus_tag="VGQ24_09215"
     CDS             complement(15121..15615)
                     /locus_tag="VGQ24_09215"
                     /inference="COORDINATES: protein motif:HMM:NF013798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macro domain-containing protein"
                     /protein_id="HEV8455057.1"
                     /translation="MILVIVDDLATTTADAVLRPADESLGPLTPAISRLDEDAGPRFA
                     EQRRLTSPLKAGAAVVTGGGDLRAPYVLHVVIRDPDSRVGRDVVRRALVSAWQRATDW
                     ELSTIAAPLVGAGAGQLSVEEAATLLAETFPPEQTGCPTELHIVVERDAERELVEAII
                     RRIA"
     gene            complement(15612..16226)
                     /locus_tag="VGQ24_09220"
     CDS             complement(15612..16226)
                     /locus_tag="VGQ24_09220"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEV8455058.1"
                     /translation="MVERRLQQAVDLASGSMPGDAVRPYRELLELEPDHVEGRLQLAH
                     LLDRLEEAADAVEVLSDGLRRAPDQTEFLVLRGSILGRLQRYREAEADLRRVLRLHPS
                     HAPAQFELGLLLWRRGLVQEAAASFHRALEFQPDNAKTYYYLGDALNQVGDLAGARAA
                     LERALQVNPGDAKACHLMGRVLDRMSLPEQAQEMYRRCRDLTGL"
     gene            16561..19473
                     /gene="uvrA"
                     /locus_tag="VGQ24_09225"
     CDS             16561..19473
                     /gene="uvrA"
                     /locus_tag="VGQ24_09225"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEV8455059.1"
                     /translation="MVRGAREHNLKNISVAIPRNRLTVITGLSGSGKSSLAFDTIYAE
                     GQRRYVESLSAYARQFLGLMEKPDVDAIEGLSPAISIEQKTTGQNPRSTVGTVTEVYD
                     YLRLLWARAGVPHCPNDGTPVARQSAAQITDTVLGWPEESRIEVLAPLVRGRKGEFRD
                     MLEDVRKRGFVRVRVDGQTYDLGSVPTLNRRQNHDIAVVVDRLVVRAGDRSRLNDSIE
                     TALKTADGLVEVVRYGGQTDRRTGGLEDTSGRPGEPSARPTDGQSVIFSERFACPVCG
                     LSLPELEPRQFSFNSPFGVCPDCHGLGTRREVNADLVLGDPSISILEGVILPWGEPSG
                     YLRKVVLPTLAKTFGFDLNAPWGEHGEAAKRAILYGAPGRFKFQTDGARGRGEFETEW
                     EGVLRNVERRYRESTSEGVRGTLEEFMIEQPCQTCGGKRLRPESLSVLVNGASIGDVV
                     ELPVERAIEFFESVPLRGSNGGRTGLDPDIAGPILKEVVDRLRFLRDVGLDYLTLGRA
                     ATSLSGGETQRIRLATQIGSRLVGVLYILDEPSIGLHQRDNARLLTTLRGLRDLGNTV
                     IVVEHDEDTIQAADHVIDLGPRAGRFGGEVVAEGTVEDIRNHPESLTGRYLRDELRVP
                     VPAGRREVPADHRLRLVGARANNLKDLTVDIPLGLFVAVTGVSGSGKSTLVTDILYQS
                     LARHFYRAKVVPGAHTRIEGLDRIDKVIDIDQSPIGRTPRSNPATYTGLFTPIRELFT
                     QLPDAKLRGYGPGRFSFNVKGGRCEACQGDGLVKIEMHFLPDVYVPCEVCKGRRYNRE
                     TLEVRYKGRSIADVLDLTVEDALEFFANQRRIAEKLELLNDVGLGYIHLGQAATTLSG
                     GEAQRVKLATELAKRDTGRTLYILDEPTTGLHFEDVRLLLDVLHRLVDKGNSVVVIEH
                     NLDVIKTADWIIDLGPEGGERGGQVVAAGTPEDVAEVEDSYTGQFLQKALTVNSER"
     gene            complement(19518..20297)
                     /locus_tag="VGQ24_09230"
     CDS             complement(19518..20297)
                     /locus_tag="VGQ24_09230"
                     /inference="COORDINATES: protein motif:HMM:NF018257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfocyanin-like copper-binding protein"
                     /protein_id="HEV8455060.1"
                     /translation="MFTSLRRRDRALFLTGLLAGISAAGCSKAADRPPSTETAASTPA
                     DRTMADSSTRPADTTTAARTEPSVAPTAAPKPATKPSPTDTPPKPAPTPPLPKPNIDP
                     GRKPPTKPADTSKAAPAGQDQWLKYDAGSNTVTFELIAGPFNFNGFTNGGATLTLPAK
                     ANVVMNFINKDGTPHSAEIISGEGPIPNAAVDPAIPRAYTNKVIEGLPQEASDVLRFT
                     VSESGEYRIFCGVPGHGLSGMWFWMRVDPAAKTPSFGPTKT"
     gene            20457..>21072
                     /locus_tag="VGQ24_09235"
     CDS             20457..>21072
                     /locus_tag="VGQ24_09235"
                     /inference="COORDINATES: protein motif:HMM:NF013123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DPP IV N-terminal domain-containing protein"
                     /protein_id="HEV8455061.1"
                     /translation="MIRFVLATCVVALIAPLQAQQSDSTLLSVQRIYGTPEFRSQAFG
                     PARWLGDGSSYTTLEDADSDGGQNLVRYDTERGGRQVLLAARQFIPQGDSVPLAIEDY
                     AWSPDTRMLLIFTNTKPVWRLNTRGDYWVLERATGNLRKLGGPDAKPSTLMFAKFSPD
                     GNRVAYVRENNLYVEDLATAAITPLTTDGSRTVINGTFDWVYEEE"
BASE COUNT         3659 a         6750 c         6939 g         3724 t
ORIGIN      
        1 cttgacccta gacaccatgt gagacgcgtc tccgcgccga ctctgagctc cctcgggcac
       61 tcgaccctgg actctagact ctagacccta gactatcttc tccattatgc ctacatgtat
      121 cccctcaccg atcgcatgga cccccagcaa tggggtgcga gtacttgatc agacgctgct
      181 ccccggggag gaggcgtatc gcgatctgga atccgtcgac gcggtggcgg aggctatccg
      241 tatgctccgg gttcgggggg cgccgctgat cggaattgcc gcggcgatgg gggtggttgt
      301 ggcagcgggg cagcggggca ggggggcagc ggggcaggaa gcgcttcaag gcatcaagga
      361 ggcttgtaca ctgctctcgg caacgaggcc gacggcggtg aacctgcact gggcactggc
      421 ccgcatgctt cgtcgcgccg agcgagcctg cgcaggcggc gaaggtctgc gggacgctct
      481 cgttgcggag gcaaatgcga tctgggagga ggatcgtgcg atgtgccgcc gcatcggcga
      541 gctcggcgcg gcgctgattc caccgggggc cacggtctgc accatgtgca atgcgggcgc
      601 gcttgcgact ggcggcatcg ggacggcgct tgcgccggtc tacacgctgc acgagtccgg
      661 ccgggcaccc cacgtggtgg ggcccgagac ccggcccctg ctgcagggca gcaggctcac
      721 cgcctgggag ctgactcatg ccggcgtgag ctgcaccctg atcgccgacg ggatgatcgc
      781 cagccgcctc cggttgggtg atattgcctg tgtcatcgtc ggtgccgacc ggatcgcggc
      841 gaacggagac gtcgccaaca agatcgggac ctacggcttg gctctcgccg cccgggcgca
      901 cggcattccg ttctatgtcg ccgctcccac ctcgacgctc gacctcgcca ccccggacgg
      961 atcccgaatt cccatcgaac agcgggacgc gagcgaagtg gcatcctggc agggcacccg
     1021 tgcggcgcct gccggagtga aggtgtggaa ccctgcgttc gatgtgaccc ctgccgagct
     1081 tatcaccggc atcatcacgg atatggggat cttcaaaccc agcgagatct ctcattccca
     1141 gtcggtggtg gatcgatgag ttccgcaact gcttcaccat gaaggcacga aggacacgaa
     1201 ggtcacgaag aaccgcaacc cgctacggtc ggctcggagg gctcacaatg acatcgcggg
     1261 tctgatcctt tcatggcttc cgtcctcgcg ctcgaccagg gcaccaccgg ttccaccgct
     1321 ctcgtcatcc atcaggacgg caccgtgctc ggccggggtt accgggaatt cacccaattc
     1381 tttcctcagc ccggctgggt ggagcacgat cccgaacaga tcttcagggt ttcggtggac
     1441 gcgatggccg aggcgctcgc cggggcgggt gaacggccga tcggtctggg cattgccaat
     1501 cagcgagaga caatcgtcct gtgggatcgc cggagcctgg ccccggtggc cccggcgatc
     1561 gtgtggcagg accggcggac cagtgaccgc tgtcgcgagt tgcgcgagag tggcgtggag
     1621 gcgctgctgc gggagcgtac cgggctggta gccgatccgt acttctccgc cacgaaactc
     1681 gaatggctgc ttcgcgacgc cggtctccgt cgtcgcgccg agcgaggcga gctggcggcc
     1741 ggcaccatcg aaagctggtt ggtggccaag ctcaccggcg gccgggtcca tgcgaccgac
     1801 cacaccaacg cctcgcgtac cctgctgtac gatcttcgcg cccgcgattg gcagccggag
     1861 ttgctgcaag tgttcggggt gcctcgccag ctattgccgg acgtggtgcg ctcgtcggct
     1921 ccggtcggac agactaatcc cgcccatctc ggattctctc tccctatcgc cgggctcgcc
     1981 ggcgatcagc aggccgcact atttggccag ggctgcgttg cgccgggact ggccaagaac
     2041 acgtatggga ccggggcttt cctgctggtg ctcgccgggg agcgtgtccc ggcgccccca
     2101 cccggggtgc tggcaaccgc tgcatgtggt gcctcgggcg agcccgccta cgcgctcgag
     2161 ggaagcgtgt tcatcgccgg cgccgccgtg cagtggttga gggacggcct cggactcctg
     2221 accaacgcgg cagagagcga ggctcacgcg cgcagcgttc ccgacaacgc cggggtgcac
     2281 ttcgtgcccg cgttcgtggg gctgggaacc ccatactggg aacccgaagc caggggaacc
     2341 atcaccgggc tgacccgggg aacctctcgc gcccacctgg tacgggcggc gctcgaggca
     2401 atggcgtaca gcagcgccga gctgctcaag gccatggcca tggccgagcg attgatggtg
     2461 ccggcgctca gggtcgatgg tggcgcggcg gccaacgact ggctcatgca gtttcaggcc
     2521 gatgtgctcg ggattccggt cgagcggccc gatctggtgg aaaccaccgc gctcggcgcc
     2581 gccgggcttg ccggaatggc tctcggtctc tggcatagca ccgcagagtt ccacgctggt
     2641 cgccgcttct ctcgcttcga gccgaggatg agcgcccggg agcgccaaac gttactggcg
     2701 ggctggcacc gggccgtagc caccgccctg gcctgggctc ggtcgggaga tgtgtcgccg
     2761 cggtcaaccg cctagcggca cgacgtaccc ggcccgtact atattcgatc gtaacgagat
     2821 ctcccggagc ccggcatgaa ggcaggtcgc aagttcatca tcggtgccgc cctcatcgtg
     2881 ggcagtgtcg gcttcctgat cgccgaaggg gtgaaggaga ccggggtgta tttcctcacc
     2941 ccatccgagc ttgccgccaa gaccgcagct gacccgactt ttgtcgagaa cgttgggttc
     3001 aagctgggcg gtaaagtggt gccgggatcg gtccgccggg acggcggtgc ccgaagaatc
     3061 gacttccagg tctctgatgg catcaagacc tatccggtca cctaccatgg cctggtgccc
     3121 gacacgttca ccgatgccag cgacatcgag gtcgtggtgg aaggcaggct gggaggagat
     3181 ggagtcatcc gcgctaccga cgttctcgcc aaatgcggtt cccgctacga ggccgctcct
     3241 aaagcctgag gctccatgac actcctgggc cagttcgcgc tctgggccgc cttggtggtc
     3301 ggtctctggt gcgtcgtgct ctcgttttcc gggaaatggc aggggcgtcc cgagctcggc
     3361 aggaccatcg tgcgctcggt gtacgcggta tgcgcctgcc tgatcgtggc atcggtctcg
     3421 ctctggaagg gcctaatcac ccacgatttc aacatggagt acgtctgggc atacacctcc
     3481 cgtaatctgc cgagcgcgta catcttctcg gccttctggg ccggtcagaa ggggtcgctg
     3541 ctcttctggg ccgtggtcct ctcgctgttc gccagtgccg cccagttcct gactgcccgc
     3601 cgcttcgccc acctgatgcc gtatgtcgcg ggggtcacgt cggcggtcat cacgttcttc
     3661 gtgagcgtga tgctcttcgc cgccagcccc tttgagcgcc tcggcttcac gcccgccgat
     3721 gggagaggtc tcaacccgca gctgcagaac gtcggcatgg tgatccaccc gccgatgctt
     3781 tacctcggct acatcagcat cactattccg tttgcgttcg cggtcgcggc gctcctttcc
     3841 cgccggctcg acaccggatg gatccatgcc atccggaaat ggaccctggt ttcctggctg
     3901 ctcttgtcgg tcggcatcac gctgggcatg tggtgggcgt acgtcgagct gggctggggc
     3961 ggttactggg cctgggatcc ggtggagaac gcgagcttcc tgccgtggct gacgatgacc
     4021 gcgttcctgc attcggtcat gatccaggaa aagcgaggca tgctgaagcg ctggaacttc
     4081 ggcttgatca tcggcacgtt cctgctcagc attttcggca cgttcatcac ccggtccggc
     4141 gtgatcgcga gcgtgcacag cttcactcag tcgaacgtgg ggtacttctt ccttgcgttc
     4201 ctggtggtgg cggcgatcct ggcctttacc ctgcttcaca cccggtggtc attgctcgag
     4261 gcggaggtcc agctcgagtc agtggtgagc cgggaggccg cgttcctctt caataatctg
     4321 ctgctcgtgg gaatcgcgtt ttcggtgcta tgggggacgc tgttccccat cctgtcagag
     4381 ctggtccgcg gcagcaagat cacggtggga ccgcccttct tcaaccgggt gaatgttcca
     4441 ctcggtctcc ttctcctggg tcttacgggt gtcggtccgc tgatcgcgtg gcgcaaggca
     4501 tcgaccgcca atctgcggcg gcagttcgtg accccggttg ctgcaggact gcttacgctc
     4561 ggggtgctcc tggcggccgg tgtgcgcgat ttctacgcga cggttgcgct cgcgcttgcg
     4621 ggcttcgtcg ccggcacgat agcccaggag ttcgcccgcg ggatccgggc ccgacggcgc
     4681 atgcatggcg aatcgcccct cctggcgttt gctcgcctga tcgggcggaa ccgccggcgc
     4741 tacggaggct acatcgtcca tgccggaatc ctgatttact tcgtcgcatt cgccgggatg
     4801 gcgttcaagc gggagcgcga ggcgacgctc aagcccggtg agtcggtgga gctgagcagc
     4861 ccattcggtc acacgtatcg tttcacccat ctcggcgtct cccaatatga ggccctcaat
     4921 cgcattgtct ctgccgctac cgtcgaagtg gccaaggatg gacaccccgc cggcctgatg
     4981 aaatcggaga agcggcagca cgtggacagc ttcaagcgtc ccaccttcga gccgtccacc
     5041 gaggtcggaa tccgcagcaa tctccaggag gatctctata tcgtgtacgc cggctcggtg
     5101 gagggcaccg aggaggcggt ctatcgcttc aacatcaatc cgctggtctg gtgggtatgg
     5161 tttggcggcc tggtgctggc cttcggcggc atcgtgacca tgtggcccgg aggtgggcct
     5221 atgatggtgg gaccccgccg gacgcaggcc ggttacgaag tttcgctggt cgccgccgaa
     5281 agggtctcgg tatgagaccg cgtgatccca gctcgcccgt gtcgcgccgg aatttcctgg
     5341 gactgggact cgttgcaatc ccgcaggaca ccctagccgg ccgcggcgcc accggaaccc
     5401 tgcgtgatcc gtcggtggtg ggacgctcgc ggacgccgac cgatgcgcgg gaaaacgacg
     5461 cccagattca ggcgatcgag cagcgcctgg cctgcaactg tggctgcacc ctggacgtgt
     5521 tcacctgccg cacgaccgat ttttcctgca cctactctcc ggcgttgcac cgcgaggttc
     5581 tcgcactccg ggaccagggg aagacagcgc agcagatcct ggatgcgttc gttgccaagt
     5641 acggggaaaa ggcgctgatg gccccgaagc ccgaaggtgt gctcaacctg acaggctatc
     5701 tgttacccgg ggcactcatc gcggctgccg gagctgggct tcttctgttt atcgggaaaa
     5761 ggaaggccgc cgttgccgcc gctacggctg cgcaaggatc cgcagcctcc gctcccacgg
     5821 gggcagccgg ctccgatgag ctcgagcggc ttcgtcgtgc ccttgccgag atcgaggatt
     5881 gatgctggtt gaggcgctgg cggccgcggc ggtggggttg gcagtgcttt ggttggtgct
     5941 tcagcccgtg ctccggccta ctggtcggga aattttgcca gtcgagccgg tcgatccgga
     6001 ggagacgccc aaagggattg cgctcacggc attgaaggag atcgagttcg acaaggagac
     6061 cggcaaactc tccgacgcgg actatgagtt tctcaagggc aagtacacgg ctgccgcgct
     6121 ggatgcgctg cgtcacgagt ccgaggaggt ggcatccgac gatgtcgagg ccatgattgc
     6181 cgccaaggtg cgcgcgcttc gctccgcttc ggccgccaca ccgtcgaacg cctccactct
     6241 tcccccgagc tccaatccag cctgtaccac gtgtggtccc cggcccgagg ccgacgcggt
     6301 cttctgctcc tcctgtggcc gccgactacc gtcccgatgg gcttgtgacc gctgcggggc
     6361 ggcgctcggc cctgatagca gattctgcga gatgtgcggc cggcaagttg cggcctgagc
     6421 tcggacgatc tccgccccag cgacagtctt cgatctcaaa ctgcgggtct accttaaacc
     6481 aaccttcaaa atctcccaca cggccgcttg ctcggccgca atgaccgcgc ggttgccgcg
     6541 cgccggatcg ctatcggcgt cctatttccg atcttggcga gtatcggggt cttcgggacg
     6601 gaggtcgggt gaagctcact ccacgactac gtggccggtc atgaaggggt ggggctcaca
     6661 gtggtaggag aactctcccg gggtcgggaa cgtctgggta aaacgatcgg cgggcgggaa
     6721 caggggtgac gcccactggc ccccatcggc agtgctggtg tgcgcgtcta catcgcagtt
     6781 gatccaggtg acccgttcac cggctcgaac ccgcacctcg gccggtccga aagcgaattt
     6841 ctgaatcacc acaatggtgg agcccggaac accctccccc accggaaagc tgcatacgcc
     6901 ctcgaccgga gcggtcgcct cgtgctcgga gaagcagccg gccagcgctg cgctcgttac
     6961 gccaatcgct agcatcctca gcgcacctcg atcccggccc cggctcaaca tccttgctag
     7021 atagcacggc accgagcgcc ggtcttggac gctcgcagtc gccttgaacg cgtatagcgg
     7081 tttatgggga gcggaccgca cgccggaact gaaagggcga aaggccggtg tgtcgccgga
     7141 agaggttcga gaagtgactc tggtcggaaa acccctcggc aagggcgatc tcggccagcg
     7201 accggtcggt atcagtgagc tggcgagcgg cacgctcgat ccgcaggtta cggacatact
     7261 ctcctacggt gcatccgaat gcgcggcgga acgcgcgcgc gagtgtgacc ggatgcacac
     7321 ccaccgattc ggccaggccg gtcagggtgg gtcggtcggc cagctcgacg tgaatccggt
     7381 cgcgcgcgtc ctccagccag cgaggccgcc ccgagttgcc gttctgctcc cgcatccggg
     7441 acgcggaggc caccagctcg agcagcagcc cttcaatagc gagcggggcg gcggcgtcca
     7501 tccgccgcat ctcgtcatac acccgccgag ccattccgga aacgagcccg ccatggaagg
     7561 acacccgctc gtcgagcacc gcggagtacg gccggatcgc catgaccagc gcgtcgtccg
     7621 gctcaatcag gagcccacgg acgtcgccct ggctgaaccg gttccagtgg cgctccccgg
     7681 ccggtgtgat cttcagggta gagctggtac acgcgattga gccgccgcgc cacatctcgc
     7741 tgaacgcgcc ctggagcacg aagcaaatgg ttggggtctc atgatggtgc cacggcagct
     7801 cggagccgtt ccggtgaact ccctcggtga tggtgaatcc acccacctgc acccgacgca
     7861 ccggcctggg ctccaccgct agccccatcc tccgcaccat ggccacctcc aagctctccc
     7921 gtcaggggag acgcgctcgt ttaggggtga gacgtcctag agtgagacgt cgggcgatcc
     7981 ctcaacgaac acaccaggcc agctacaccg ctccaagcgg gctacccctt tgcaagaccg
     8041 ggtggaccgg gcttgctagc gtgctctaga gaaaggccca gcgaccagcc tgtgaaggag
     8101 tgctgtcatg aaccatttcc ctcttcgtaa gatcgccatc gcggctctgt ttccaatagt
     8161 cgcggcctgt ggcgatgacg gaccgtccag tgaggcgacg agcttcacgg ctgccctgtc
     8221 gggcgccaac gaagttccgg cggtgacgac gccggcgacg ggcaccgcca ccctttcagt
     8281 aagcaacaac cagatcactt ataccatcag tgcgacggat ctgcagaatg cggttctcgg
     8341 gcacattcac cttgctccag caggccagaa cggcgacgtg cggctgaact tgtgtggcac
     8401 gggtgaccct cagccggtct gcgccagcgg cccaggcaca ggtgtagtgg ctaccggtac
     8461 caacgggacg accgtcggcg atccgcccat cacgttcgag gaattgctct cggcgatgcg
     8521 cacggggggt gcctacgtga acgtacacac cagcgcgccc ggttgcacgc agggccagcc
     8581 tggctgtaac cccggtggtg agattcgcgg gcaaatcgta gcgaactaag ggggatgcat
     8641 acgtgaagtg attggtggtt gaggttatac agggagcatc gcgatgaaat ggggacatct
     8701 gatcgctgtt gtcgccgctg ttatgctggg ctgctccagt gacggcggtc taagcgcgcc
     8761 gggtgatgga gcgaacagcg gcccgacagt aacagtcagg aacaacctct tcgatccggc
     8821 ctcactaaat gtggcggtga acagcactat tacctgggtg tggaactcag gtggcgtgga
     8881 gcacaacgtc accttccagg acggggccaa ttctggcaac cgaagctcag gctcctttcc
     8941 ccgcacgttc cagactgcag ggacctacgc ctacatgtgc accatccacg gcgcgcaggg
     9001 aatgacaggg gtggtgactg ttgggggcgg aaccggcggc ggcggagggg gtggaggcgg
     9061 cggcggcggt gggggcggcg gctacggtcc ctgagctgac gtgcaaccgc cgctccgcat
     9121 ggctgtgggg tgcggagcgg cgtttcggca gctgagctcc cgataatttc agagcctgta
     9181 ctgcagccct gccgcgaacc tccgtcgcca caacgcacga agatcaaagc cttgcagctc
     9241 gccatcctcg aagggtgacg ggatgagcgc ggctccggcc gagagggtgc ccgcgaaacg
     9301 accacccagc gggatgccca gtgaggccgc gccctggatg ccgatacgag tccgcgattt
     9361 ctcgtccacg atgctccaga cctcgaacag cggccccact cgcaggagca cctggctgct
     9421 cgaccccacc gacgcgatcc ggtagctcac ctccggggag gcactgtaaa ccttgaagac
     9481 cccctttgcc gctacgactg catcgctgcc ttcgagggcg agacttgccc cggcgtacag
     9541 caggcgaaga cccacgcctc cgctgccgaa gcttcgttcc agtgtagcgc cgaaggtggt
     9601 tggacggtaa ggccggaacg agcggtgttc aggggctatt tcttccgatc cgccccagaa
     9661 acgatccgca cccacgtcga gcccaaccat ccattgccca accgcgggag agaccaggaa
     9721 actcgccccc acggcagcag tgatcaaagc acgaaccagc agcccagccg ccatgatcac
     9781 cgcatctcca gtttgagcca cccgttggtc acgctgttct cccctttgac gatccagttg
     9841 gctcccggat acgactgacc tacgactaca tcctcgatgg cattgccgat caaatcgtcc
     9901 ttcgtggtaa tgaaggagta tgctgcgctc aggattttct ggagcgcatt ggcccgcttg
     9961 acgtatttga cgagggtcga gctcgaggtg tctttcgccc ccgtcaggtt cggatactgc
    10021 gcctggagtg tagccacgag attcttgaaa cgattgccat cgaacttgat gacgcagccc
    10081 gtatcgtcat cttccagcgc gacaatcctg acgttctgat cggggtgcgc catcctgtaa
    10141 ttgttgagct gggcttgggt aaacagcagg gcactacccg tccagtcgag attgttctga
    10201 tcaaagtggt agtacccacc cgcagcccct ccggcgcact ggtaatcctt cagcgaatcg
    10261 gtggcgcccg attggccgag tatgtggacc tcaaattcgg ggtctccctt aaaccaaccc
    10321 tcaaaatctt gcacgaaatg cgcatacgtc atgtacaggc cggcaggcgg ggcggaggtc
    10381 gttccgcctc cgccgccgcc cccgcaagtt gtgcactcca tgggagccgc atctccggca
    10441 agccgggaga aatcggtttc taccggcacc atggcgagca ccggcgtgcc gggcggggca
    10501 tccgggctca acacctggcg ccggccggag acgtcgtacg cgaggggaac ctcgcggtct
    10561 tcccgggcac tggcaaccag aagccctgga cctccagtcc aactggcccg gtgggccggt
    10621 accgggaaat agatctcgag cgggatggcc tggttggcat ccgcttcgac agtcgcttca
    10681 gccgtgccgc tgagccgggc aacctccttc agcgcgcggc cattcgaggc ccggaggaag
    10741 ctttgcaact ggagcttgtg ctcgacgaag ggagactggt ccagctcggc tttgagggtg
    10801 gcacggaacg ctgggtcgat cagggccagc gcgaggcggc gagccaggcg gtccatggca
    10861 gcccgctcga gggagctccg ggcattgggc gatacggccg aaggaagagg agctgcttct
    10921 tcgttggcgg tgggcgctgg gcggtcgcac gcggcaagag ctgccgccag cgcgaacagg
    10981 ggaaggcgga tcctgcgaga catggcccct ccttggagat gatcacgagc gctgacggca
    11041 gcgcgggccg acggcgacgc caaggtagga acaggatcac tgcgactgag gacctgggtt
    11101 acgcgggagg ggacaaaaag gcaggtggtt gaggcgagag ctgctcgaag acaaccagga
    11161 ccgcgtagtc gtggtcgtca aatgcagccg ccatgacctc gagactggag tgggtcccac
    11221 tcttgtttcg aaagaggaca ccctgtggtc cgccgcaggg cgagccaagc aggcgggcct
    11281 gttcctctgg gctggcgaac acaccgagga ctccgccgac ccgctgcaac tcggcaggtg
    11341 acttgtagcc cagcatttgg gcgaacgggc ggttggcggt aaggagggtg ccgtcccggc
    11401 gaaagaggca gaggcccgcg ggggcgttat cgatgagggt gtgaagcagc gccaccgcgg
    11461 cgcgcaacgc gtcttcgacc cggcgccggt cggtcatggc gtccttgaga tcgaggatct
    11521 gcttgcgcag gccggtcacc tcatggacca gctcctgctt cggacggtgt tcgtcgcgca
    11581 tcgcaagatg taggacggtg ggtcgcagcc atcttgcacc ctgatgtcag actgaaacgg
    11641 ctgccctggc cgcctcgagc gctcgttcga tgccgccgga tgggatatcc aggtgggtga
    11701 cggcgcgtac ggtgctgcgg ccgagcacac tgaatctcac gccgtgagag gcgagggtgc
    11761 gggctccgaa ggcctcgccg gtaatgccgg tccggctcac atcgaagatc acgatgttgg
    11821 tctccacccg atccggctcg attgccactc cagtgatagt ggccaggccc gaagccagcc
    11881 gccgcgcccg ctcgtgatcc tccgccagcc ggtccacatg gtgccgcagt gcatacaagc
    11941 cgcccgctgc catgatgccc gcctgccgca tggcgccccc gaaccgctgt ttgaagcgcc
    12001 aggcgtcggt aatgaacgcc tggcttccgg caagcaccgc ccccatcggg gcgcccagcc
    12061 ctttgctgag gtcgatccac accgaatcga acggagcggc gaaggcccgg gccgatgtgc
    12121 cactcgccac gacggcgttg agcagccggg ctccgtccat gtgggcgacc aaacccgcgg
    12181 catgggcggt ttcacatacc gcctcgatct gttgcagcgg ccagcagact ccgccggcga
    12241 cattgctggt ctgttcgact gagaccgccc gggttcgggg catgaagtac accggcggcc
    12301 ggatcgcgtc tcgcacctgc cccgcagtgt agaggccgcg aggcccggtc agcgggcgca
    12361 gcacggcgcc aaccatcgct gccggtcccc ccacctcata caacaaggga tggccgaact
    12421 cctggagtag gatctcgtca ccggcgcggc agtggacggc gaatgccacc tggttgcaca
    12481 tcgttccaga ggggagaaag agagccgcct ctttgccgag gagctcggcc acggtttcct
    12541 ggagcaggtt gacggtggga tcttcccgaa gctgctcgtc cccgacttcc gcttcacaca
    12601 tgaagcggcg catggccgcc gtgggacggg tgacggtgtc gctgaagaga tctaccgcta
    12661 ccactccatc ctctcgatgg tgcgcagggc catccgcagg gggacaatgg ttgcggcaag
    12721 gcaagtcagt acgacgatta cgccggccgc cgccagctcg gcggtggtgt tggtggaggg
    12781 gtaggtgaat cgttcgatcc ggagctgatc cgtcaccggc cccgcctcga ccatgatgat
    12841 tgcggccagc aggctcagac tgctcatcat atagaccagc ccgccgaagc tggtgggaat
    12901 ctgggctgcg ttctcggtgc cgaactgggg atagagggca ccgaaagaca gtgccaatgc
    12961 gctggctgcc agggtgtaga ggacgatcgt tcccacggcg acccccatca tgaacacact
    13021 cgcgtgcagg agccagttgg taaagacggt gatgacgagt gccagcacca gcaacggcac
    13081 ggtaccgatc caatacttgc tccagagcat ggcctgaggg tcgagcggac tggagcggag
    13141 cagccacatc tggcggccct cgagggaaat ggctggaaaa atgaagcgag ccgccaccgc
    13201 ggagaggacg aaccccgcca gacccaggtt cagaaacgag atcatcgtca ccagtctgaa
    13261 tggcacccgc tcgcccgagt ggaggggcaa cgacttgatg ttgaagagat ataccatgag
    13321 caggaccgcc agcaggatga gctggctcca ctgggtgttg tctctgaaga acagccgcag
    13381 gtctttgagg atgaactcgc gcttggacgg gggaaggaag cggagaaccc ccgccaccgg
    13441 gccgcggagc ggccgccgga ccttgcgctc tgctccctcg agtgccttgg agaacccctg
    13501 gcggtataac caccggtgca gcagtgcccc gagagcgacc gccaccggcg ccacgcccca
    13561 gagcttggcg atcggccacg gatcgccgac gtgcagcaac cagttcatga tcatcgccgc
    13621 ggtccactca ctgggcaaca gtgggctggt cggggtgcgg aggacggcca ggtaatcgac
    13681 caggttcttg aatccctccg gctgcgccag ctgctcgggg cggagaaagc ggagcgccac
    13741 cacggcgatc acgatcgtgc cggttgccaa caggccgagc agctcacggg ttcgccgcgc
    13801 cgggaagatg ttcaccagga tcagcgtgat ggccgtgcca accaccgcag ggatgaccag
    13861 gtagggcagg aacgcggcga gcgccacgac cgggtaccag ggacccccgc ggtacacgat
    13921 gccatatgcc gtgaagatgg gtagggccag cagccccacc atccaggacg agtgaacgat
    13981 cgtctccgcc agcttcgaga gatacagccg cgacccgccg atcggagccg cgacgagcag
    14041 gtcgagatcc ttggccagga agaaggtgga aagcgcggtg atgatgttgg agaggagcag
    14101 aatggagagg aacaccagaa gaatcacgcc gagcaccttg cccgccatga ggttcccgat
    14161 ctcttcgacg ctccggaagt agttgagcac ccggtaggca atcccgaaca cggcgcccca
    14221 gaagaccagc gcgacgatag cgaggagcag cacccgcccg cccgcgctgg actgctcctg
    14281 acgcaaccgg gcgagcacgc tgcgccactt gggcgtgagc acggtccaga ggctgggctg
    14341 cacgacgctg gcggtcgtca tgcgctcacg cctcgaggat cgtatcgagc tgctgatcgc
    14401 gcaggccgcc ggtgagcttg aggaagagat cttccagtcc gagattctcc gaagcggtct
    14461 gttcctgtac ctcggccatg gtcccgtgcg cggcgatctt gccgcggtgt acgatggcga
    14521 tgcgatcgca catcgtctcc gccacttcga gcgtgtgggt gctcatcagc acggtgccgc
    14581 cgcgatccac gaattggcgg aacaggtcct tgagcaggcg ggcactcttg gggtccagcc
    14641 ccaccatcgg ctcgtccacc acgatcacct cgggccggtg caccagcgca cccgaaatga
    14701 tcagcttctg ccgcatcccg tgactgtacg tctcggtgag ctcgtccttc cagcgggaga
    14761 gctcgaacaa ttcgagcagc tcgtcgattc gtcgctcaat tgccggcccc tgttggccgt
    14821 acaacgcggc cgcgaaacgg agaaactcgc ctccggtcag cttgtcgtac acgaagggac
    14881 ggtcgggaat gaagcccagc cgcttcttgg cctcgagcgg ccgccgaatg atgtcgatcc
    14941 cgccgatctc gaccgtgccg ctggtaggct ggaggatccc tgcgatcatc cgaaacgtgg
    15001 tggtcttccc ggcgccgttc gggcccagga atccgaacag gtcgccgctg ggaatcacga
    15061 ggtcgatgcc atctacggcg gtgaacttgc cgtatcgttt ggtgagttgg accagtcgga
    15121 tcaagcgatc ctccgtatga tggcttcgac cagctcgcgc tccgcgtcgc gctccaccac
    15181 gatgtgcaac tccgtcgggc agccggtctg ctccgggggg aatgtctcgg ccaggagggt
    15241 cgctgcttct tccacgctca attgaccggc cccggctcca accagggggg ccgcgatggt
    15301 actcagctcc caatcggttg cccgctgcca ggcggacacc agcgcccggc ggaccacgtc
    15361 cctgccgacc cgggagtccg gatcccgaat gacgacgtgc agcacgtacg gggccctgag
    15421 gtctccgcct ccggtaacca cggcggcgcc ggctttgaga gggctcgtca ggcgtctctg
    15481 ttcggcaaat cgcgggcctg catcctcgtc cagcctcgat atggcgggag tgagtggtcc
    15541 caggctctcg tcggccggcc tgaggactgc gtctgccgtg gtggtggcaa ggtcatcgac
    15601 gatgaccaga atcacaggcc ggtgaggtcc cggcagcggc gatacatctc ctgggcctgc
    15661 tccggaaggc tcatccggtc gagcacccgt cccatgaggt gacaggcctt ggcgtcgccc
    15721 ggattcacct ggagcgctcg ttccagggcc gctctggcac cggccaggtc gcccacctgg
    15781 ttgagcgcgt cccccaggta gtagtaggtc ttggcattgt caggctggaa ctcgagcgca
    15841 cggtggaacg aggctgcggc ttcttgcacc aggcctcgcc gccagagcag cagacccagc
    15901 tcgaactgtg caggcgcgtg ggagggatgc agacgaagca cccgccggag atcggcttcg
    15961 gcctcgcggt aacgctggag gcggcccagg atggacccgc gcaagacgag aaactcggtc
    16021 tgatcggggg ccctccggag cccgtccgac aggacctcga cggcgtcggc tgcctcctcg
    16081 agccggtcga gcagatgggc gagttgaagg cggccctcca cgtgatcggg ttccagctcg
    16141 agcagctcgc gataggggcg aacggcatct cccggcatcg atccgctcgc gaggtctacg
    16201 gcctgctgca atcgccgctc aaccacgctc cgctctcgac ccggaggtgg tggaccggcg
    16261 gcccccgttt ccatcgttcc tctcggggcc gagtcggcct ggagcatgcc gggcgccgga
    16321 tccgctcggc tggttgggtc ggggccgaca ggtggcatca aggctatggg ctactggcta
    16381 tgggctgtta actatccgtg aaaaggctct cgactgcttc gtatggtaga tgccgctccc
    16441 cgaaactgga agccattgcc acagatgtgg cccacagccc atggctcggg gccgacagcc
    16501 cccgttgacc ccgtgctcga tcttcgggta cctttcgggg ctatggctca ggaatttctg
    16561 gtggtccgcg gggcccgcga gcacaacctc aagaacatct ccgtcgcaat tccccggaat
    16621 cgcctcaccg tcatcaccgg gctttccggc tcgggtaaat cgtcactcgc cttcgatacg
    16681 atctacgcgg agggccagcg ccgctacgtc gagtcgctct cggcctatgc ccgccagttt
    16741 ctggggctga tggaaaaacc ggacgtggac gcgatcgagg gactctcacc ggccatttcg
    16801 atcgagcaga agactaccgg tcagaatccc agatcaaccg tagggacggt gaccgaggtc
    16861 tatgactatc tccggctgct ctgggcccgc gccggcgtgc cgcactgtcc caacgacggc
    16921 acaccggtcg cccggcagag cgcggcgcag atcaccgaca cggttctggg ctggcccgag
    16981 gaatcgagga tcgaagtgct cgcgccgctg gtacgcggcc ggaagggcga gttccgtgac
    17041 atgctcgagg acgttcgtaa gcgcggcttc gtgcgcgtac gggtggacgg acagacgtac
    17101 gacctgggct cggtccccac tctcaaccgg cggcagaatc acgatatcgc ggtcgtggtc
    17161 gatcgcctgg ttgtgcgggc gggcgatcgc tcgcgactga acgactcgat cgagaccgcg
    17221 ctgaagacgg cggatgggtt ggttgaggtg gtgcggtacg gcggacagac ggacaggcgg
    17281 acaggcggtc tggaggatac atccggccga ccaggggagc cgtccgcccg tccgaccgac
    17341 ggccagtctg tcatcttctc cgagcggttc gcgtgtcccg tctgcgggct gtcgcttccc
    17401 gagctcgagc ccaggcagtt ctccttcaac tcgcccttcg gcgtgtgtcc cgactgtcat
    17461 ggtctgggca cccggcgcga ggtgaatgcc gatctcgtgc tcggcgatcc cagcatctcg
    17521 atactcgagg gcgtgatcct gccgtggggt gagccgagtg gatacctgcg gaaggtagtg
    17581 ctcccgacgc tcgccaagac gttcggcttc gacctcaacg ctccctgggg cgagcacggc
    17641 gaagcggcaa aacgggcgat tctgtacggc gcacccggcc gtttcaagtt ccagaccgac
    17701 ggcgcccgcg gacggggcga gttcgaaacg gaatgggaag gggtactccg caacgtcgag
    17761 cgacgctatc gcgagtccac cagcgagggg gtgcggggca cgctcgagga gttcatgatc
    17821 gagcagccgt gtcagacctg tggcggcaag cggcttcgtc ccgagagcct ctcggtactc
    17881 gtcaacggag cgagcattgg agatgtcgtc gagcttccgg tcgagcgggc catcgagttc
    17941 ttcgagagcg tcccgcttcg gggctcgaac ggcgggcgca cagggctcga ccccgatatc
    18001 gccggcccca tcctgaagga ggtcgtggac cggctccgct tcttgcggga tgtcgggctc
    18061 gattatctga ccctcggacg ggccgccaca tcgctctccg gtggggagac ccagcggatc
    18121 aggctggcca cccagatcgg gtcccgcctg gtgggcgtgc tctacatcct cgacgagccg
    18181 agcatcgggc tgcaccagcg cgacaatgcg cggctgctca ccaccctgcg cgggctcagg
    18241 gatctgggga atacggtgat cgtcgtcgag cacgatgagg acaccatcca ggcggccgac
    18301 cacgtgatcg atctgggccc cagagcaggt cgtttcggag gtgaagtggt ggcggaggga
    18361 acggtcgagg atatccgaaa ccacccggaa tcgctcactg gtcgctacct gcgggacgag
    18421 ctacgcgttc cagttcccgc gggccgccgc gaggtcccag ccgaccatcg gctacggctg
    18481 gtgggtgccc gggccaacaa tctcaaggac ctcacggtcg acattccact cgggctcttc
    18541 gtggcggtga ccggtgtgtc cggttcgggg aagtccaccc tcgtcaccga cattctctat
    18601 cagtcgctcg cgcgtcactt ctaccgagcc aaggtagtgc cgggcgcgca tacccggatc
    18661 gagggtctcg accgaatcga caaggtcatc gacatcgatc agagtccgat cggccgcacg
    18721 ccgcgttcga acccggccac ctacaccgga ctcttcaccc cgatccgcga gctcttcacc
    18781 caactgcccg atgcaaagct ccgggggtat ggcccggggc gattctcctt caatgtgaag
    18841 ggcggacgtt gcgaggcgtg ccagggtgat ggcctggtga agatcgagat gcactttctg
    18901 ccggatgtct atgtgccctg cgaggtatgc aaggggcggc gctacaaccg ggagacgctc
    18961 gaggttcgct acaaggggag gagtatcgcc gacgtgctgg acctgaccgt cgaggacgcc
    19021 ctcgaattct tcgccaacca gcgccgcatc gccgagaagc tcgagctgtt gaacgatgtc
    19081 ggcctcggct atatccacct gggtcaggcg gcgactacac tgtccggcgg cgaggcccag
    19141 cgggtgaagc tcgccaccga gctcgccaag cgcgacacgg ggcggacgct ctacatcctg
    19201 gacgaaccga cgaccgggct gcacttcgag gatgtgcgcc ttctgctcga tgtcctgcat
    19261 cgcctggtcg ataagggcaa cagcgtcgtc gtgatcgagc acaacctgga cgtcatcaag
    19321 accgctgact ggatcatcga tctcgggccg gaggggggcg aacggggagg acaggttgtc
    19381 gcagcgggga cgcccgaaga cgtggcggaa gtggaggaca gctataccgg gcaattccta
    19441 caaaaagcgt taacagtaaa cagtgaacgg taaacgggcc gcagcacccc gccggttcac
    19501 tgtttaccgt tcaccgttca cgtttttgtg ggcccgaagc tcggagtctt agctgcagga
    19561 tcgacccgca tccagaacca cattcccgag agcccgtgcc cgggtacgcc gcagaagatg
    19621 cgatactcgc cactctcgga cacggtaaac cgcaacacgt ccgacgcctc ctgcggtaag
    19681 ccttcgatca ccttattggt gtaggcccgc gggatcgccg gatccaccgc ggcattcggg
    19741 atggggccct cgcccgaaat gatctcggcg ctgtgcgggg taccatcctt attgatgaag
    19801 ttcatcacca cattcgcctt cgccggcaag gtcagggtgg cgcccccgtt ggtaaagccg
    19861 ttgaagttga acggacccgc gatcagctcg aacgtcaccg tgttgctgcc ggcatcgtac
    19921 ttgagccatt gatcctgccc ggccggggcc gccttgctgg tgtcggccgg cttggttggt
    19981 ggctttcgtc ccgggtcgat gttgggcttg gggagcggcg gagtcggcgc cggcttgggc
    20041 ggtgtgtcag tgggagatgg cttagtggcc ggcttggggg ccgccgttgg tgctacgctg
    20101 ggttcggttc tggcggccgt ggtcgtgtcg gccggccttg tgctggaatc ggccatggtg
    20161 cgatccgcgg gcgttgaggc cgcggtctca gtggagggcg gtcggtcggc ggccttggaa
    20221 cagccggcgg cggagatgcc ggccagcagc ccggtcagaa acaaagcccg atctctgcgc
    20281 cgtagggaag taaacatgga cctctcactt ctccatggta taatcacagc ttcgccgagc
    20341 gcgtgggttg ctcggcgtct caatgaaggg ataccgccgg gactctcccg gtgcaacatg
    20401 agtcatcgag cactgccacc accgcagccg aaaccacttc ctccagcgga cttctcgtga
    20461 tccggttcgt tctcgccacc tgtgtcgtcg ccctgatcgc gcccctccag gcgcaacagt
    20521 cggattccac acttctctcg gttcagcgca tctacggcac gcccgagttc cgcagccaag
    20581 ccttcggacc agctcggtgg ctgggggacg gctcgtcgta cacgacactg gaggatgcgg
    20641 acagcgacgg cgggcagaat ctggttcgct atgacaccga gcgcggcggc cgccaggtgc
    20701 ttctggcggc tcggcagttc attccccagg gtgacagcgt tcccctggcc atcgaggact
    20761 atgcctggtc tcccgacacc cggatgctgc tgatcttcac caacaccaag ccggtgtggc
    20821 ggctcaacac gcggggagac tactgggtgc tcgagcgcgc caccggtaat ctccggaagc
    20881 ttggcggccc cgacgcgaag ccatcgaccc tgatgttcgc caagttctct cccgatggga
    20941 atcgggtagc ctatgtccgg gaaaacaatc tctatgtcga ggatcttgcg acggctgcca
    21001 tcacgccgct caccaccgac ggctcgcgaa ccgtcatcaa cggcaccttc gactgggtct
    21061 acgaagaaga gc
//
LOCUS       DASYRV010000348         3292 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3663962, whole genome shotgun sequence.
ACCESSION   DASYRV010000348 DASYRV010000000
VERSION     DASYRV010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3292
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3663962"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1680
                     /locus_tag="VGQ24_09240"
     CDS             <1..1680
                     /locus_tag="VGQ24_09240"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEV8455062.1"
                     /translation="VKPSLKGNLLAMTMCWLLALLLAAIVTAVAPTIGAGQATVDLSV
                     ALPAAVIDLRTEEGTALVKAQWRYSDAKVVDVAHRAPGPDLRPSGPPNRTNDISPHAG
                     GADFDDSAWETVVPAELEARRSNGRLAFNWYRTRLTLPAKVAGFDVTGSTVVFELVID
                     DYAEIWVDGRLPLVLGQTGGQLIKGFNAPNRVILTENARPGQEIQLAIFGVNGPISSP
                     PANFIWVRSATLDFYRKDQVGGAQPTLAKVVRLDPGLDRIIPQGTRLEKLAGGFQFLE
                     GPVWHPDGYLLFSDPNANTIYRWTRDGAVSVFRSKSGYAGFDIGDYHQPGSNGLTLDR
                     NGLLSINEHGNRRVTRLERTGKITVLADRYDGKRLNSPNDLVYRSDGTLYFTDPPFGL
                     PKAFDDPKKELPFSGVYMVKDGQVILLTRELSGPNGIAFSPDEKYLYVDNWDLKRKVL
                     MRYEVRPDGSIANGKVFYDFSRDPEPVALDGIKVDHEGHVYVSAPGGVWILSPEGKAL
                     GRIVPPEHDANFTFGDADGKSLYLTASTGLYRIRVNVPGIRAPVGVQAASR"
     gene            1710..2708
                     /locus_tag="VGQ24_09245"
     CDS             1710..2708
                     /locus_tag="VGQ24_09245"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEV8455063.1"
                     /translation="MRIALGAALSSPAAAQLQPRPTHEPVIRRIDPRFGALVPLNAEL
                     QKIVDDHGWAEGPVWVRNGGYLLFSDVVKNRIYRWKEGEGESVFLERSGYTGAAPFAG
                     PEPGSNGLAIDREGRLVFCQHGNRSISRREADGHITVLVDRYRGKRINSPNDLAFKSN
                     GDLYFTDPPFGLPRTFGDTAKDLAFQGVYRLSRDGKLTLLTTVLSAPNGIAFSPDERT
                     LYVSNADRNRLVWLAFEVRSDGTLGRSRLLYDGTEPLAGRPGTADGLKVDRQGNVFGA
                     GPGGVYVFSSAGVLLGWFDFGGNVGNVAWGEDGSSLFIAANAAVYRVRLTTRMAGR"
     gene            complement(2705..>3292)
                     /locus_tag="VGQ24_09250"
     CDS             complement(2705..>3292)
                     /locus_tag="VGQ24_09250"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEV8455064.1"
                     /translation="GGFIQKLHEENGVVFHLRQKAREISGGTVTLENGERLESDFVVA
                     GIGVRPNLELAERAGLTIDRGVLVDEQLQTSAPGVYAAGDIARWPDPHTGELIRVEHW
                     VVAQRQGQAAARNILGQGHRFDSVPFFWSQHYDVPINYVGHAERWDTVEVDGDVSARD
                     CAVRFKRAGRILAVATIYRDRESLEAELRMEQAVG"
BASE COUNT          577 a         1076 c         1062 g          577 t
ORIGIN      
        1 gtaaagccat cgctaaaagg caatctgcta gctatgacaa tgtgctggct cctcgccctc
       61 ctgctggcgg caatcgtgac cgccgtcgcg ccaactatcg gcgccggcca ggccacggta
      121 gacctgtcgg tggctcttcc cgctgcggtc atcgacctcc ggaccgagga gggcactgct
      181 ctggtcaagg cgcagtggcg ctacagcgat gccaaggtgg tcgacgtcgc ccaccgcgca
      241 cccggtccgg atcttcgtcc gtcgggcccg cctaacagga ccaacgatat ctcgccgcac
      301 gccggcgggg ccgacttcga tgactcggcc tgggaaaccg tggtgccggc cgagctcgag
      361 gcgcgccggt ccaacggacg cctggctttc aactggtacc ggaccaggct gacgctgccc
      421 gcgaaggtcg ccggcttcga cgtgaccggc tcaacggtcg tgtttgaact ggtaatcgac
      481 gactacgccg agatctgggt ggacggccgg ctgcccctgg tgctggggca gaccggaggt
      541 cagctcatca agggcttcaa cgcaccgaat cgggtgatcc tgaccgagaa cgctcgaccg
      601 ggtcaggaga tccagctcgc catcttcggc gtcaacggac cgatctccag tccgccggcg
      661 aacttcatct gggttcgctc ggcgacgctc gacttctatc gcaaggatca ggtgggcggg
      721 gcccagccca cgctagcgaa ggtagtgcgg ctcgatccgg gattggaccg gatcattcct
      781 caaggcaccc ggctggagaa gctggccggc ggtttccagt tcctggaagg tccggtctgg
      841 catcccgacg gttatctact cttcagcgac ccgaacgcca acaccatcta tcgctggacg
      901 agagatggag cggtgtcggt cttccgcagc aagagcggct acgccggctt cgacatcggg
      961 gactaccatc agccgggctc caacggcctc acgctcgata ggaacgggct gctgagcatc
     1021 aacgagcatg ggaaccggag ggtcacccgg ttggagcgta ccgggaagat caccgtgctg
     1081 gccgaccgct acgatggcaa gcggctcaac agccccaacg acctggtgta ccgctccgat
     1141 ggcaccctct acttcaccga cccgccgttt ggactgccca aggcgttcga tgacccgaag
     1201 aaggagctgc cgttcagcgg cgtctacatg gtgaaggatg gccaggtgat cctgctgacc
     1261 cgggagctga gcgggccgaa cgggatcgcc ttctcaccgg acgagaaata cctgtatgtc
     1321 gacaactggg acctgaagcg caaggtactc atgcggtatg aggtgaggcc ggacggaagc
     1381 atcgcgaacg gaaaggtctt ctacgacttc agccgggatc cggagccggt ggcgctcgat
     1441 gggatcaagg tggatcacga gggccatgtg tacgtgtcgg ctccgggggg cgtttggatc
     1501 ctgtcgccag agggtaaggc actgggccgg atcgttcccc cggagcacga cgccaacttc
     1561 accttcggcg acgccgatgg aaagtcgctc tacctgacgg cgagcacggg gttgtaccgt
     1621 attcgggtga acgtccccgg gatcagggca ccagtgggtg tgcaggcggc ctcgagatga
     1681 ggagtcatcg atgcctcgct gcgctcggga tgaggattgc gctgggagcc gcgctctcaa
     1741 gcccggccgc agcccagctt cagccccgtc ccacgcacga accggtcatc cgccggatcg
     1801 atccgcggtt cggcgcgctg gtgccgctga acgccgagct ccagaaaatc gtggatgacc
     1861 acggctgggc cgagggaccg gtctgggtcc ggaatggtgg gtacctgctc ttctcggacg
     1921 tagtgaagaa ccggatctac cgatggaagg aaggcgaagg cgagagcgtc ttcctcgagc
     1981 ggagcggcta taccggtgcc gcgccattcg ccggccccga gccgggttcg aatggtctgg
     2041 cgatcgaccg cgagggccgt ctcgtgttct gccagcatgg caaccgcagc atcagccggc
     2101 gagaagccga cggccacatc acggtcctgg tagaccgcta ccggggtaag cgcatcaaca
     2161 gccccaacga cctggcgttc aagtcgaacg gcgacctcta tttcaccgat ccgccctttg
     2221 gcctgccccg cacctttggc gacacggcaa aggacttggc tttccagggc gtctatcggc
     2281 tgagccggga cggtaagctg acgctgctca ctacggtatt gagcgcgccc aacggcatcg
     2341 cgttctcacc cgatgagcgc acgctttatg tctccaacgc cgaccggaat cgactggtct
     2401 ggttggcctt tgaggtcagg tccgatggca ccctgggccg cagccgcctg ctgtatgacg
     2461 ggaccgagcc gcttgccggc cgccctggca ctgcggatgg gctgaaagtg gaccgccaag
     2521 gcaacgtctt cggggcgggc ccgggcggcg tttacgtgtt ctcctcagcc ggtgtcctgc
     2581 tcggctggtt cgacttcggt ggaaacgtcg ggaacgtcgc ctggggtgag gacggatcca
     2641 gcctgttcat cgcggctaat gccgcggtgt accgcgtacg gctgacgacg cgaatggccg
     2701 gccgctaacc caccgcctgc tccattcgga gctcggcctc cagactctcg cggtcccgat
     2761 agatggtcgc gacggccagg atccgaccgg cacgcttgaa gcgaacggcg caatccctgg
     2821 ccgagacatc cccatcgacc tcgacggtgt cccagcgctc cgcgtgaccg acgtagttga
     2881 tcggcacatc gtagtgctgg ctccagaaga agggcacgct gtcgaatcgg tgcccttggc
     2941 ccaggatatt tctcgccgcc gcctggccct ggcgctgggc cactacccag tgctccactc
     3001 gaatgagctc gccggtgtgc gggtcaggcc agcgtgcaat gtctcctgcc gcataaactc
     3061 ccggcgcgct ggtctggagc tgctcgtcca ccagcactcc tcggtcgatc gtcaggccgg
     3121 cgcgctccgc cagctccagg ttgggccgga caccgatccc cgctaccacg aagtccgact
     3181 ccagccgctc gccgttctcc agcgtcactg taccgccgga gatctctctc gccttctgcc
     3241 ggagatggaa cacgacgcca ttttcctcgt gcagcttctg gatgaagccc cc
//
LOCUS       DASYRV010000349         6726 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3663983, whole genome shotgun sequence.
ACCESSION   DASYRV010000349 DASYRV010000000
VERSION     DASYRV010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6726
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3663983"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1069
                     /locus_tag="VGQ24_09255"
     CDS             <1..1069
                     /locus_tag="VGQ24_09255"
                     /inference="COORDINATES: protein motif:HMM:NF013465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HEV8455065.1"
                     /translation="LTPLLLAAGLLARPASPLPRFPAEAAPPVKVVTSLTTYGAIARE
                     IVGDRGTVTSIAQGNEDPHFVQPKPSFVAVLRDADLFVTTGMDLELWVPALLDRAGNR
                     RILEGGPGFVPAYKGIALLEVPTSLSRAQGDIHVDGNPHIHTDPLNGIIIGRNVLAGL
                     QRVSPQNASYFEGREKDFEKRVLEATMGPTLVEVLTPATAYELLRNDKLYDFLGKQKY
                     QGKPLMAQLGGWLKQGEVFRGKEMACYHKEWAYFSNRFKIECVTFIEAKPGIPPTPGH
                     VQEVIQLMKQRKIPVLFASNYFDRKQIQQVAQRTGAKAVIVPENTGGAPGVNTYFDLV
                     NSWVGSLATAFQELALKSGAS"
     gene            1066..1917
                     /locus_tag="VGQ24_09260"
     CDS             1066..1917
                     /locus_tag="VGQ24_09260"
                     /inference="COORDINATES: protein motif:HMM:NF013143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HEV8455066.1"
                     /translation="MMDLSLFLPPLVACLVIVSIHSYLGLHVIAREVIFVDLSLAQMA
                     ALGSTVAILAGSQPDSPSAFLYALGFTSLGAVVFAMTRSDEKGLVPQEAIIGIVYVMA
                     SAAAILVADRTPRGGEAIKDILVGSLLWVNWPTIGRLAAIYAVIGLFHWALRSRFLTI
                     SFNPQTAVARGWRIRWWDFLFYLSFGIVITFSVPIAGVLLVFSFLVVPAAIAFQFTRR
                     QGPLAAISWIAGALASATGLWVSFHYDLPTGPVVVCMFGVVLLAAYLLRLLGPLPSRY
                     VRGSAEG"
     gene            complement(1861..3399)
                     /locus_tag="VGQ24_09265"
     CDS             complement(1861..3399)
                     /locus_tag="VGQ24_09265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEV8455067.1"
                     /translation="MTLGAHVEPGDDPLSSTGSEPLVPILRVDEGKVDAVALATWHEA
                     LSNTLAVEVPHDLMGLWLYPAQGGVVLVGPAALAQDDLVIPIPSPYLKPEQLSVLEEI
                     IVDAGYASATCLPIRFGKRDVGLLLVADLQPERYGPVERVVLQCVAQRVGPMLGRIAR
                     QWTPAAGPSSRQQERIAGLLETVARANREGSTPQRFIAAIGSGLAPLLPHEHMELLVQ
                     DESGRQYFRLGEHSGGPLWADPSLVISRDHLDVGDIFGARSRLLVPDTYEDDRWPRGF
                     LTATEPPGADIRAVAGARLNLRGKSPAYLLVGSIGPDLYGAEDVELLVLLGGLILPQI
                     AEFLRVPEPLRLVPNPSPADGPAELLLKIAGALATMTDAAEATNLIAIEGTSILPFDR
                     MTFALKLTDSDRLVLLHPGERRATLMPADGTAMAQVLSGESPYVLGEASGLSRVVVPL
                     RVAGRVHGALIFTAALTTALNETHLDGAQRLADLVAAHLELLRRSAFRAPPYVPGRKR
                     TEKA"
     gene            3836..6169
                     /locus_tag="VGQ24_09270"
     CDS             3836..6169
                     /locus_tag="VGQ24_09270"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEV8455068.1"
                     /translation="MTTDTANIPVTGMTCAACSATVQRTLERTPGVSSANVNLITSSA
                     TVDFDPGTTSPERLVDAIRATGYGAELPRAGESAEELLETQDLVREEEIADLRRKFAV
                     SIVAAVLTMLFSVPLAALVPGSMADPLMRLMTPLAEGMRQAAPWIDRVPADLWRYLLL
                     ALTLPVVGWAGRHFYTRAWSGFRHHSADMNTLIAVGTGAAFLFSVGATLADDWLSAHG
                     VEPQVYYEAVTWIIALVLLGNLLESRAKGRTSGALRRLIGLRPSTARVVREGREQELA
                     LNQLRVDDEVVVRPGEKIPADGVILEGTSYVDESMLTGEPVPVFRGPGDRVIGATLNR
                     NGAFHFRVARVGEETVLSQIIRLVQEAQGSKAPIQRLADRISAIFVPVVLSIAIATFV
                     IWFDFGPPAAYLLGLVAAVTVLIIACPCAMGLAVPTAVMVSTGRGAERGVLIRRGEAL
                     ERTGRIDVVVFDKTGTVTEGRPAVRSVQLANRDSLDLDEARVLQLAASVERLSEHPLG
                     EAIVAEAHRLDVSLEDVTEFESLTGKGVLGIIHGRRVAVGNAALMRELGIETTLLRSR
                     ADQLAAEGQTTVYLAVDGQVAALIAVADPIRPTSRAAVTQLQRLGLEIVLLTGDDHRT
                     AEAVARAIGVDRVIAELLPGQKVEEVRRIQNQGKAVAAVGDGLNDAPALAQADIGIAM
                     GTGVDVAVEAADIVLMRSDLLGVVDAIGLSRRTMRVIRQNLFWAFVYNVIGIPVAAGA
                     LYPGFGLLLTPAMAAAAMAASSVSVVTNSLRLRNAKA"
     gene            6297..6641
                     /locus_tag="VGQ24_09275"
     CDS             6297..6641
                     /locus_tag="VGQ24_09275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sensitive transcriptional regulator"
                     /protein_id="HEV8455069.1"
                     /translation="MSDVTTSPCACGARRGDGTQAVSVDPEVKHAIATRLRRIEGQVR
                     GLQKMVEEERYCPDVLTQLSSVQEALRGAGRELMHHHLKHCATEAIRSGTPEEVDAMY
                     EELVELMYRSAR"
BASE COUNT         1117 a         2143 c         2221 g         1245 t
ORIGIN      
        1 tctcactcca ctgttactgg ctgcgggcct gcttgctcgt ccggcttccc cgcttccccg
       61 cttccccgcc gaggccgccc cgcctgtaaa ggtcgtcacc agcctcacca cctacggcgc
      121 catcgcccgg gagatcgtgg gggaccgcgg caccgtcacc tccattgctc agggcaacga
      181 ggatcctcat ttcgtgcagc cgaagcccag ctttgtggcc gtgctgcgtg acgctgacct
      241 gttcgtgact accggaatgg atctcgagct ctgggtgccg gcgctcctcg accgggcggg
      301 taatcggagg atcctcgagg gcggcccggg ctttgtccct gcgtacaagg gaatcgccct
      361 gctggaggtg ccgacctcac tgagccgggc gcagggcgac atccacgtgg acggcaaccc
      421 gcacatccac accgatccgc tgaacgggat catcatcgga cggaacgtcc tcgcgggact
      481 gcagcgagtc tcgcctcaga acgcctccta cttcgagggg cgggagaagg acttcgagaa
      541 gcgggtgctc gaagccacca tgggccccac cctggtggaa gtgctcaccc cggccaccgc
      601 gtacgaattg ctgcggaatg acaagctcta cgactttctg ggcaagcaga agtatcaagg
      661 caagccgctc atggctcagc tgggtggctg gctcaagcag ggcgaggtgt tccggggcaa
      721 ggagatggcg tgctaccaca aggagtgggc ctacttcagc aaccggttca agattgagtg
      781 cgtcaccttc atcgaggcca agccgggaat tcccccgaca cccgggcacg tgcaggaggt
      841 gattcagctg atgaagcagc ggaagattcc ggtgctcttt gcctcgaact atttcgaccg
      901 gaagcagatt cagcaggtag cccagcggac cggcgccaag gcggtcatcg taccggagaa
      961 caccggcgga gcgcccggcg tcaacaccta cttcgacctg gtcaacagct gggtagggag
     1021 cctggccacc gcgtttcagg agctggcgct gaagagcgga gcctcatgat ggacctgagc
     1081 ctgttcctgc cgcctctggt ggcctgcctg gtcatcgtgt cgatccattc gtatctgggc
     1141 cttcacgtga tcgcgcgaga agtgatcttc gtggacctct cgctggcgca gatggcggcc
     1201 ctggggtcca cggtcgccat tctcgccggg agtcagccgg actcgcccag tgcatttctc
     1261 tacgcactgg gtttcacctc gctgggcgcg gtggtcttcg ccatgacccg gtcagacgag
     1321 aagggtctgg tcccacagga agcgatcatc ggtatcgtct acgtcatggc atcggccgcc
     1381 gctattctgg tggcagaccg tactccacgg ggtggggagg ccatcaagga catcctggtg
     1441 ggcagcctgc tctgggtaaa ctggccgacc atcggtcgac tggctgcaat ttacgccgtc
     1501 atcggcctgt ttcattgggc gctgcggagc cggtttctca ccatctcgtt caatccccag
     1561 accgcagtgg cccgaggctg gcggattcgg tggtgggact tccttttcta tctgtcgttt
     1621 ggaatcgtga tcacgttctc ggtaccgatt gcgggcgtcc tgctggtgtt ctccttcctc
     1681 gttgtgccgg ccgcgatagc ctttcagttc acccgccgcc agggtccgtt ggcggccatc
     1741 tcctggatcg ccggcgccct tgcctcggcg accgggctct gggtctcctt tcactacgac
     1801 ctgccgaccg ggccggtggt ggtctgcatg ttcggggtgg tgctgttggc ggcttacctg
     1861 ttacgccttc tcggtccgct tccgtcccgg tacgtacggg ggagcgcgga aggctgaacg
     1921 ccgaagcagc tcgagatggg cggccacgag atcagccagg cgctgggccc cgtcgaggtg
     1981 ggtttcgttc aaggccgtgg tcagcgcggc ggtaaagatg agggcgccgt gcactcgccc
     2041 ggcaacgcgc aggggaacga caacgcggct cagtcccgat gcctctccca gtacgtatgg
     2101 cgactctcct gagagaacct gggccatggc cgttccgtcc gcgggcatca gagtagcgcg
     2161 tcgctctccg gggtgaagta acaccagccg gtcgctatcg gtgagtttca gcgcaaaggt
     2221 cattcggtcg aacggcaaaa tgctggtgcc ttcgatcgcg atcaggttag tggcctccgc
     2281 cgcgtcggtc atggtcgcca gagcgcccgc gatcttgagc agcagctcgg ccggcccgtc
     2341 ggccggcgag ggattgggga ccaaccgcag cggctccggt actcgcagga actccgcgat
     2401 ctgtggcagg atcaacccgc cgagcagcac cagcagttcg acatcctccg cgccgtagag
     2461 atccgggccg atgctcccca ccaggaggta agccgggctc ttgccccgga gattcagccg
     2521 ggccccggcg acggctctga tgtccgcacc gggcggctcg gtggcggtga gaaacccccg
     2581 gggccaccgg tcatcctcgt aggtgtccgg gacaagcaag cggcttcggg cgccgaatat
     2641 gtcgcccaca tcgaggtggt cccgactgat caccagcgaa ggatccgccc agagcggtcc
     2701 gcccgagtgc tcgcccaacc tgaagtactg tcggccggat tcatcctgca ccagcagctc
     2761 catgtgttcg tgcggcaaca gcggcgcgag cccgctgcca atcgcggcga tgaatcgttg
     2821 tggcgtgctg ccctcgcggt tggcgcgggc gaccgtttcg agcagcccgg ctatccgctc
     2881 ctgttgcctg gaactcggcc ccgccgccgg ggtccattgc ctggcgatcc tccccagcat
     2941 gggccccact cgctgagcca cgcattgcag cacgacccgc tccaccggtc cataccgttc
     3001 cggctggaga tccgcgacga gcagcagccc cacatcccgc ttgccgaacc gaatcggcag
     3061 gcacgtcgcc gatgcgtacc cggcatcgac gatgatctcc tccagcaccg acagctgctc
     3121 gggtttgaga tacggtgagg gaatcgggat cacgagatcg tcttgggcca gcgccgcagg
     3181 cccaaccaga acgacaccac cttgagcggg gtacagccag agccccatca gatcgtgggg
     3241 gacctcgacc gcgagcgtgt tggataacgc ctcatgccag gtggcgagcg ccacggcatc
     3301 aaccttcccc tcgtcgacgc ggagaatggg aaccagtggc tcactcccgg tggaagagag
     3361 tggatcgtct cccggctcga catgggctcc gagggtcatg gtgcagagtc aggcatgacg
     3421 tatgcccgcc gggcggcgag cacaaccttt gaatgggatg ggacttaggt ggaatcgccc
     3481 ggtggttcag gccgggagct cggccgtccg ggtggcgtcc tgccgcgtct cttgcaggtc
     3541 gctcgccact agacccaata gaactcaacg acttgacata cccccacccc ctatgtaggc
     3601 tcctcaccac ccatgcagca cactacgcgt tgcgagcgct gcgaagcctt gattgccgaa
     3661 gcgggataca ccgctagcgc cacgccatcg gacggcggcg aggccgagga ggcggtgtga
     3721 ccaccgtgca gctcgtggtg acgtcgttgg ggttggtggc gatcgcatgg gtgaactacc
     3781 acttcttctt tagtaaaaag cgtgaacagt gaacagtgaa cggtgttttt ctcctatgac
     3841 cactgacact gcaaacatcc ccgttaccgg catgacctgc gctgcctgca gcgcgacggt
     3901 gcagcgcacc ctggagagga cgcctggcgt gagctcggcc aacgtcaacc tgatcaccag
     3961 ctcggccacg gtcgactttg acccgggaac caccagcccc gagcgactag tcgatgccat
     4021 ccgggcaacc ggctatgggg cggagcttcc ccgcgcgggc gagtcggccg aagagctgct
     4081 ggagacgcag gacctcgtcc gtgaggagga gatcgccgat cttcgccgca agttcgccgt
     4141 cagtatcgtg gcggcggtgc tcaccatgct cttcagcgtg cccctcgccg cactggtgcc
     4201 aggctcgatg gcggacccgc tcatgcgatt gatgacgccg ctggctgaag ggatgcggca
     4261 ggcggcaccg tggatcgatc gagttccggc cgacctctgg cgctacctgc tgctggctct
     4321 caccctgccg gtggttgggt gggccggacg gcatttctac acccgcgcgt ggtccgggtt
     4381 tcggcaccac agtgccgaca tgaataccct gattgccgtc gggactggag ccgcgttcct
     4441 cttcagcgtg ggggcgacgc tggcggacga ctggctttcg gcccacggag tcgagccaca
     4501 ggtttactac gaggcggtta cctggatcat tgcgctcgtc ctgctcggca acctgctcga
     4561 gtctcgggcc aaggggagga cctcaggagc gctccgccgc ctgatcggtc ttcggccctc
     4621 cacggcacgc gtcgttcgcg agggtagaga gcaggagctg gcgctgaacc agctccgagt
     4681 ggacgatgag gtcgtagtgc gcccgggcga gaagatcccc gcggatgggg tgattctcga
     4741 aggcaccagc tatgtagacg agtcgatgct caccggcgag ccggtgccgg tctttcgggg
     4801 tcccggcgat cgggtcattg gtgccacgct caaccgcaat ggtgccttcc attttcgggt
     4861 tgcgcgggta ggggaggaga ctgtcctctc ccagatcatt cgcctggtgc aggaggctca
     4921 gggatccaaa gcgccgatcc agcggctcgc cgatcggatc tccgccatct ttgttccggt
     4981 cgtattgtcc attgcgatcg ccacattcgt gatctggttc gatttcggcc ctcctgccgc
     5041 ctacctcctc gggctggtgg ccgccgtgac ggtcctgatc attgcctgcc cctgcgcgat
     5101 gggcctggcc gtcccgactg cggtcatggt ctccaccggt cggggggcag agcgcggcgt
     5161 tctcatcagg aggggcgagg cactggagcg taccggacgc atcgacgtcg tcgtctttga
     5221 caagaccggg acggtcaccg aagggcgtcc ggcggttcga tcggtgcagc tggcgaaccg
     5281 ggattcactc gatctcgacg aggcgcgcgt gcttcaactc gcggcctcgg tagagcggct
     5341 gagcgagcac cctctggggg aagcgatcgt cgccgaagcc caccggctcg acgtctcgct
     5401 cgaagacgtg accgaattcg agagcctgac cggcaaaggc gtgctgggca tcatccacgg
     5461 ccgccgcgtg gccgttggaa acgccgctct gatgcgggag ctcggcatcg agacgacgct
     5521 gttgcgctcg cgcgcggatc agctcgcggc agagggacag accacggtct acctggcggt
     5581 cgatgggcag gttgccgcct tgatcgccgt ggccgacccg atcagaccaa ccagccgggc
     5641 cgcggtcacc cagctccagc ggttgggatt ggagatcgtc ctgctcaccg gtgacgatca
     5701 ccggaccgcc gaggcagtgg cgagggccat cggcgtggac cgtgtgatcg ctgaactctt
     5761 gccggggcag aaggtcgagg aggtccgccg tattcagaat cagggtaaag cggtcgccgc
     5821 tgtgggcgat gggctgaacg acgctccagc cttggcccag gctgatatcg gaatcgcgat
     5881 ggggactggg gtggacgtgg cggtggaggc cgcagacatc gtcctcatgc ggagcgatct
     5941 gctgggggtg gtggacgcca tcggcctgtc acgccggacc atgcgggtga tccgtcagaa
     6001 tctcttctgg gccttcgtct acaacgtcat cggcatccca gtcgcggccg gtgcgctcta
     6061 tccaggcttc ggtctcctgc ttaccccggc aatggctgcc gcggcgatgg cggccagctc
     6121 ggtgagcgtg gtgacgaata gtttgcgact caggaacgca aaagcgtgag cgggaagtgc
     6181 aaaagcgtaa gcggtaagcg gggagttgcg cctgttttcc gccgctggtt ccctgctcac
     6241 cgctcaccgc tcacgttgtc ggtttttccc gctcacgctg tttgaggtac ttcaacatgt
     6301 cagacgtaac cacctccccc tgcgcctgcg gcgccagacg cggcgatggg acccaagcgg
     6361 tctcggtgga tccggaggtg aagcatgcga tcgcgactcg gcttcggagg atcgagggcc
     6421 aggtgcgggg gcttcagaag atggtggagg aggagcgcta ttgtcccgac gtgctcaccc
     6481 agctctcatc cgttcaggaa gccctccggg gcgcggggcg ggagctgatg catcaccacc
     6541 tgaagcactg cgccaccgag gccatccgct cggggacgcc ggaggaggtc gatgcgatgt
     6601 atgaggagct ggtggagttg atgtatcgga gcgcgcggta aggcggtccc tatccgaggt
     6661 ttcctacctg ctcaggttca gcagagatcg cggacttctg cctctcccgg acttcgaaac
     6721 tctcga
//
LOCUS       DASYRV010000350         3338 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2357828, whole genome shotgun sequence.
ACCESSION   DASYRV010000350 DASYRV010000000
VERSION     DASYRV010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3338
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2357828"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..813
                     /locus_tag="VGQ24_09280"
     CDS             <1..813
                     /locus_tag="VGQ24_09280"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEV8455070.1"
                     /translation="TEIAPAPQRPNPSSWPNDRLTVAWLGHATVLLNFHGSWILTDPA
                     LERRIGIGRGLAKLGPRRLVQPALRVRELPPLDLILLSHAHMDHTDLGTLRLLPAGIP
                     VVVQAGNRDLVRRFDQVHELAWGQSIELNGLQIEATEAAHWGARMVTDRHRGYGGYLL
                     QKGGYSVLFAGDTAYTDALTRLGHRRPIDLAILPIGAYDPWIANHASPEQAWLMFRRL
                     GARYVLPVHHSTFRLSREPVDEPIRRFLAAAGEERWRVVVTDVGATWSLPSP"
     gene            1033..3006
                     /locus_tag="VGQ24_09285"
     CDS             1033..3006
                     /locus_tag="VGQ24_09285"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3857 domain-containing protein"
                     /protein_id="HEV8455071.1"
                     /translation="MRACPRLFVCILSLVSAPAWAQAPVITPAGDPSVRTDTLYSLAV
                     NPADHPNESVVLLLDDGVVRYEANGTGVKTYRQVTQILSGDAVDDYAEHEFSYAPGHQ
                     RLTVNWIRVVRPDGTVVSDAPTQAQDADVPATLGDPVYTDAKVRRYSLSGVAPGTIVD
                     WSYTVEERKPFLPGDFSLSWSVHTGRITRLSRYIVDLPASLQPRLLEHNLTFPRRETV
                     TRGRRTYVWATRDVPKLQGEDFMADSNGVFMSIELAAPLEWETIGRWYAGLARDRYAL
                     DATVTAKLPVLLAGARSANDTLRAVQRWVAQDVRYVSIALGLGGYQPRMPAEVVATGY
                     GDCKDKATLFIAIVNALGLRAYPVLLNSGSRVERALPSIGQFDHAIAVVERPEGRLFV
                     DLTADLAPLGELPAGIQGQFALVVHPDGTSEQVTLPEAEPGANLQETRIVGTLSTEGY
                     VTASYEERGLGTRQYSLRRMFLAPIDSTHRADFARSIATKLYPGAEADSLQIFDGRDL
                     TADTRIALRIVHGLAARPAGTGRTVILSLPFSSMGSMADAAKALEAKGPRNFPIDASK
                     VVGPIAGQSDVRLSLPPGWRVQLPPSVEVKGKWGSYVARYTQEGATLHVSRRIEGARG
                     VHPPEAVTDLAAWLRAIGQDDVPYLVIEPGQTP"
     gene            3067..>3338
                     /locus_tag="VGQ24_09290"
     CDS             3067..>3338
                     /locus_tag="VGQ24_09290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455072.1"
                     /translation="MRLQAEIKQSKPFPSPTAEALLSILRTAAILDHHLAEVLRPYGI
                     TTTQYNVLRILRGAGHRGMCGREVGERLVSKVPDVSRLLDRTEELGL"
BASE COUNT          549 a         1144 c         1053 g          592 t
ORIGIN      
        1 acggaaatcg ctcctgcacc ccaacgccca aacccttcgt cctggcccaa cgaccggctc
       61 acggtggcgt ggctgggcca tgcgacggtg ctgctcaact tccacggctc ctggatcctc
      121 accgatccgg cactggagcg gcggatcggc atcggccgcg ggttagccaa gctgggaccg
      181 cgtcggctgg tgcagcccgc gctgcgagtc cgggaactgc cgccgctcga cctgattctc
      241 ctctcgcacg ctcacatgga tcacacggat ctgggcacgc tgcggctgct ccctgccggc
      301 attccggtgg tagtgcaggc cggcaaccgt gatctagtcc ggcgattcga ccaggtacac
      361 gagctggcct ggggccagag catcgagctg aatggcctgc agatcgaggc gaccgaggct
      421 gcccattggg gtgcccgcat ggtgacggac cggcatcgtg gctacggagg atatctgctt
      481 cagaaaggcg ggtactcggt actgtttgcc ggcgacaccg cgtacacgga tgcgctcacc
      541 cggctcggac atcggcgacc gatcgacctc gccatcctgc cgatcggcgc ctacgacccg
      601 tggatcgcca accatgcctc gcccgaacag gcgtggctca tgtttcgaag gctgggcgcc
      661 cggtatgtgc tgccggtcca tcactcgacc ttccgtctga gccgtgagcc ggtagacgag
      721 cccatccggc gcttcctcgc ggcggcgggc gaggaacgct ggcgggtggt ggtcaccgat
      781 gtcggggcaa cctggtctct gccttctccc tagttcggcc tcggccgagc gttgttgctc
      841 ccctgcctca aacccgggct gacctccgcc cattctgagc cttaccgctg tgccctggcc
      901 gagttaggcg caggtcaatg ctggccttcc tcttgcgccc gggcaggcgg ttccccgatt
      961 cctcatattc cccgcgcctc tcgagatcgg ccaatccggc gattctgggc gcgcgtttgc
     1021 ccgaggctcc acatgcgcgc ctgcccccgt ctgttcgtgt gcatcctgtc cttggtgtcg
     1081 gccccagcct gggcccaggc accggtcatc actcccgcag gcgacccatc agtccggacc
     1141 gacaccctct atagtctcgc ggtcaatccg gccgaccatc cgaacgagtc ggtcgtcttg
     1201 ctgcttgacg acggcgtggt gcgctacgag gcgaacggca cgggcgtaaa aacctaccgc
     1261 caggtaactc agatactctc gggagacgcg gtcgatgact acgccgagca tgagttctcc
     1321 tatgctccgg ggcaccagcg cctgaccgta aactggatcc gggtggttcg ccccgacggc
     1381 accgtggtga gcgacgcccc cacccaggcg caggatgccg atgtaccggc caccctgggc
     1441 gacccggtgt ataccgacgc gaaggtccgg cgttattcgc tgagcggagt ggcacccggt
     1501 acgatcgtgg actggagcta taccgtcgag gagcggaagc cgttcctgcc aggcgacttc
     1561 tctttgagct ggagcgtcca caccggccgg attacccggc tttctcgtta catcgtagac
     1621 ctgcctgcct cgctgcagcc ccgcctgctc gagcacaacc tgaccttccc tcgccgagag
     1681 acggttactc ggggcaggcg cacctatgtc tgggcgaccc gggacgtgcc caagctccag
     1741 ggcgaggact tcatggccga ttccaacggc gtgttcatga gcatcgagct ggccgctccg
     1801 cttgaatggg agacgatcgg ccgctggtat gcggggctgg cgcgcgatcg atacgccctc
     1861 gatgccacgg tcactgctaa gctcccggtg ctcctggccg gcgcccgatc ggccaacgat
     1921 acgctccgtg cggtgcaacg gtgggtcgcg caagatgtcc ggtacgtctc catcgcgctc
     1981 ggcctcggag gctatcaacc acggatgccc gccgaggtcg tggcaaccgg ttacggggat
     2041 tgcaaagaca aggcgaccct cttcatcgcc atcgtcaacg cactgggatt gcgggcctat
     2101 ccggtgctcc tcaacagcgg ctcccgggtg gagcgcgcgt tgccgtcaat cggacaattc
     2161 gatcacgcca ttgccgtggt ggagcggccg gagggccggc ttttcgttga cctgacggcc
     2221 gatcttgccc ctctcggcga gctacccgcc ggcatacagg gacagttcgc gctggtcgtg
     2281 catccggacg gcacctcgga gcaggtcacc ctgccagagg ccgagcccgg cgccaacctc
     2341 caggagaccc gcattgtcgg cacactttcc accgaggggt acgtcacggc ctcgtacgaa
     2401 gagcgtgggc tcggcacccg tcagtatagt ctgaggcgca tgtttctcgc cccgatcgac
     2461 tcgacccatc gggccgactt tgcccggtcc atcgccacaa agctgtaccc cggggccgag
     2521 gcggatagcc tgcagatttt cgatggccgc gatctaacgg cagacacccg aatcgcgctc
     2581 cggatcgtgc atgggctggc cgcgcggccc gcagggaccg gccggaccgt catccttagc
     2641 cttccgttca gcagcatggg cagcatggcc gacgcagcca aggcgctgga agccaagggg
     2701 ccacgcaact ttcccatcga cgcttcgaag gtcgttgggc ccatcgcggg gcagagcgat
     2761 gtgagactct cgttgccgcc gggctggcgg gtgcagctgc cgccctcggt cgaggtgaag
     2821 ggcaagtggg ggagctacgt cgctcgatac acccaggagg gtgccacgct acacgtgagc
     2881 cggcgaatcg agggagcccg gggggtccat cctcccgagg ccgtgactga cctggctgcc
     2941 tggcttcggg cgatcggcca agacgacgtg ccctacctcg taatcgagcc gggccagacc
     3001 ccctgatcgg accccccgac cgccgctcgc gcttgccaat gactgttaca acacatattc
     3061 ttcaatatgc gacttcaagc cgagatcaag cagagcaagc catttcctag ccccacggcc
     3121 gaggccttac tgagcatcct ccgaactgcg gcgatactcg accaccacct ggccgaagtg
     3181 ctcaggccct atggcataac gacgacccaa tacaacgtcc ttcggatcct gcgtggtgca
     3241 gggcatagag ggatgtgcgg tcgcgaagtg ggggagcggt tggtctccaa ggtgcccgat
     3301 gtgtcgcgcc tcctcgaccg caccgaggag ctcggcct
//
LOCUS       DASYRV010000351         1921 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2215211, whole genome shotgun sequence.
ACCESSION   DASYRV010000351 DASYRV010000000
VERSION     DASYRV010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1921
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2215211"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1223
                     /locus_tag="VGQ24_09295"
     CDS             <1..1223
                     /locus_tag="VGQ24_09295"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEV8455073.1"
                     /translation="RGGPAGDKTVVDSRTGTTAVLPGPAPMEGDKFPPNKTYYEIPIA
                     IQDRSFNSDGSLFYPDTREFFDGATADDPGFIPFTDLSPIWNPEFFGNMIMVNGNTWP
                     FQTVEKRRYRLRFLNGCQSRFLILDFNEIPGVEVWQIGNEGGFLAAPVNLTADNGNRL
                     LMGLAERADLIVDFTNVPVGQHVLRNVGPDEPFGGGVPGVDFEGSDPATTGQIMAFNV
                     VPAVAAEPTTPPQYLVLPPITPLPAATATRPLALIEQASAYWDGPAEATLGYVGSDGL
                     PVQEMWADPISTNPTVGDTEVWEFHNFTADAHPMHVHEVAFEVVNRQGLVTNADGETE
                     PPSRLVGDPRPPEAWESGFKDTVISYPGEVTRLRLKFTNPGQFVWHCHIVEHEDNEMM
                     RPYRIGPVQPGQPE"
     gene            complement(1344..1700)
                     /locus_tag="VGQ24_09300"
     CDS             complement(1344..1700)
                     /locus_tag="VGQ24_09300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455074.1"
                     /translation="MVDRVQTVGRKHDVEHPIQMTVATSDGRRLWASRYSSEHRLRSL
                     FYSTNVLTLRELHPEVRALELLSEATRLVVSEPLGDLPGAWNEVPESSWGVIQEGADR
                     DAPLPSTRELARPREC"
BASE COUNT          346 a          669 c          598 g          308 t
ORIGIN      
        1 tccgcggcgg gccggccggt gacaagacgg tggtcgacag ccgcaccggg accaccgccg
       61 tccttcccgg tccggcgccc atggaaggcg acaagttccc gcctaacaag acctactacg
      121 aaatcccgat cgcgatccag gatcgctcgt tcaacagcga cggctcgctc ttctatcccg
      181 atacccggga gttcttcgac ggggccacgg ccgacgaccc cggcttcatc ccgttcaccg
      241 acctctcgcc gatctggaat cccgagttct tcgggaacat gatcatggtg aacgggaaca
      301 cgtggccgtt ccagaccgtc gagaagcggc gctaccggct ccggttcctc aacggctgcc
      361 agtcccgctt cctgatcctg gacttcaacg agatcccggg cgtcgaggtc tggcagatcg
      421 gcaacgaggg cggcttcctg gccgcgccgg tgaatctcac cgcagacaac ggcaacaggc
      481 tgctgatggg actcgcggag cgcgctgacc tcatcgtcga cttcaccaac gtgccggtgg
      541 gccaacacgt tctccgcaac gtcggtccgg acgagccgtt cggcggcggc gttcccggcg
      601 tcgacttcga agggtccgac ccggccacca ccggccagat catggcgttc aacgtcgttc
      661 cggccgtcgc ggcggagccc actacaccgc cgcagtacct ggtgctcccg cccatcacgc
      721 cacttcccgc cgccaccgcc acgcggccgc tggcactcat tgaacaggcc tcggcgtact
      781 gggacggtcc agccgaagcc acgctgggct atgtggggag cgatggcttg ccggtacagg
      841 agatgtgggc agatccgatc agcacgaacc cgaccgtggg cgacacggag gtctgggagt
      901 tccacaactt caccgccgac gctcacccga tgcacgtcca cgaggtcgcg ttcgaggtgg
      961 tgaaccggca ggggctggta accaatgcgg atggcgagac ggagccaccg tcccggctcg
     1021 tcggcgatcc tcggccgccc gaggcctggg agagcggctt caaggacacg gtcatctcct
     1081 atccaggcga ggtcacccgc ctccgcctca agttcaccaa cccaggccag ttcgtctggc
     1141 actgccacat cgtcgagcac gaagacaacg agatgatgcg gccgtaccgg atcggtccgg
     1201 tccagccggg ccagccagaa tgacatagac caagcagctg gaggcccgat ccgctcgtcc
     1261 tgacctgtcc tgctccacca accagctggc agcaatgcca gctggcgttg agtttgatct
     1321 gcggccttgg cgagcttccg gcatcagcac tcacgcggtc gggctagctc gcgcgtggaa
     1381 ggaaggggtg catctcggtc ggcgccttcc tggatgacac cccaactcga ctcagggacc
     1441 tcgttccagg cgccgggcag atctccgagc ggctcggata cgaccagccg ggtcgcctcc
     1501 gacaacagct cgagcgcgcg aacctccgga tggagctcgc gcagcgtgag cacattggtg
     1561 ctgtagaaca gcgaacgcaa ccggtgctcg ctggagtagc gagaagccca gagccgccga
     1621 ccgtcactcg tcgccaccgt catctggatc gggtgctcca cgtcgtgctt gcgcccaacg
     1681 gtttgaactc ggtcgaccat ccgcccgacc gcggccggtg gatcgtggtc gagcccgaag
     1741 cgcgagatag aacatgacct ccgagtccgt cgatccctcg atgtacgagt agagcgccgg
     1801 gtcgatgtca gcgcactgct gccggtatgc gtatcaccgt agtcacgctc cttcagcggc
     1861 ccgcctgacg agcgtggacg ccgccagtga ctgcagggtc tcccgaacac cgcgggcgaa
     1921 t
//
LOCUS       DASYRV010000352         2534 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1111111, whole genome shotgun sequence.
ACCESSION   DASYRV010000352 DASYRV010000000
VERSION     DASYRV010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2534
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1111111"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..987)
                     /locus_tag="VGQ24_09305"
     CDS             complement(<1..987)
                     /locus_tag="VGQ24_09305"
                     /inference="COORDINATES: protein motif:HMM:NF027806.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEV8455075.1"
                     /translation="MQLNILANGPAQADSTSQRSESQVVVPEPTQLALQYYRSGNMLW
                     AIGAAVGLIVPALLLFSGASSRLRNLAYRMGRRWLPSVLLYALLFTLTYALLTLPLAY
                     YEGYVRQHAYGLSNQSLDKWLSDWLKGVAVSGVGLALVLWIPYLLLRRSPRRWWLYAG
                     LATAPIATFVLVVSPVWVDPLFNDFGPMQDRALEARILTLADRAGIPGSRVYQVKKSV
                     DTKTVNAYVTGVGSSKRIVLWDTMLAKLNPDEIAFVMAHEMGHFVLHHTLAIILGATL
                     LVTGSLYLVHRVAGTLIARFGSRFGFDRLPDVASFPLLLLLGTLVSLITTPLV"
     gene            1204..1407
                     /locus_tag="VGQ24_09310"
     CDS             1204..1407
                     /locus_tag="VGQ24_09310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455076.1"
                     /translation="MRALFALLALLGVAGIALGVLTIVRGMSGPAGKPFSFENYGGPG
                     PIIAGLIVLAATLYLRSIWKPRD"
     gene            1447..1662
                     /locus_tag="VGQ24_09315"
     CDS             1447..1662
                     /locus_tag="VGQ24_09315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455077.1"
                     /translation="MRPLTLVGILLLALGAFVLFRGMSYKSKDEVLRVGDLKASVEER
                     HAVPTWVGGLAIVAGIVLIAGGMKRRV"
     gene            1668..1997
                     /locus_tag="VGQ24_09320"
     CDS             1668..1997
                     /locus_tag="VGQ24_09320"
                     /inference="COORDINATES: protein motif:HMM:NF013222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HEV8455078.1"
                     /translation="MGSSSYQRIYAVVSRIPEGRVATYGQVASLAGLAGQARQVGYAL
                     HALPDGTAVPWHRVVNASGEISLRSMPGGELVQRALLEREGIRLDPRGRVSLARVRWL
                     PRFKTIR"
     gene            1994..>2534
                     /locus_tag="VGQ24_09325"
     CDS             1994..>2534
                     /locus_tag="VGQ24_09325"
                     /inference="COORDINATES: protein motif:HMM:NF012703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginase family protein"
                     /protein_id="HEV8455079.1"
                     /translation="MIVHLLGVPMDLGSGRRGVDMGPSAIRIAGVADRLRELGHKVVD
                     EGDVVIKNMEELKVGHERARYLTEIARAAAILARKIERIMGLGHFPLVLGGDHSIAVG
                     TVSGIAAHAQRQNQRVGLLWIDAHGDINTPETSPSGNIHGMPLAALLGFGAGELTSVA
                     GPPPKVHAANVALVGIRSLD"
BASE COUNT          441 a          786 c          850 g          457 t
ORIGIN      
        1 caccagaggc gtggtgatca gcgagaccag tgtgccgagc aggagcagca aagggaagga
       61 tgcgacgtcg gggagccggt caaatccgaa cctactgccg aatcgcgcga tcagcgtacc
      121 ggctacccgg tgaaccagat acagcgaccc cgtcaccaga agggtcgctc ccaggatgat
      181 ggcgagcgtg tggtggagaa cgaaatggcc catctcgtgc gccatgacga aagcgatctc
      241 gtccggattg agctttgcga gcatggtgtc ccacagcacg atgcgcttgc tggatccgac
      301 gcccgtcacg tacgcgttca cggtcttggt atccacgctc ttcttcacct ggtacacccg
      361 gctgccgggg atcccggcgc ggtccgccaa ggtcaggatg cgggcttcga gcgcccggtc
      421 ctgcatcggg ccgaagtcgt tgaagagggg gtccacccag acgggtgaaa ccaccagcac
      481 gaacgtcgcg atgggagcgg tcgccagacc cgcgtacagc caccagcgcc tggggctgcg
      541 ccgcagcagc aggtagggaa tccagagcac cagcgcgagt ccaaccccgc tgaccgccac
      601 gcccttgagc cagtcgctca gccacttgtc gagactctgg ttggacaggc cgtacgcatg
      661 ttgccgcacg tagccctcgt agtaggcgag cggcagggtc agaagggcgt aggtgagggt
      721 aaacagcagc gcgtagagca gcacggacgg gagccaacgg cgccccatcc ggtacgccag
      781 attgcgaagc cggctggagg cgccggaaaa aagcagcagg gcggggacga tgagccccac
      841 cgccgccccg attgcccaca gcatgttgcc gctccgataa tactggagtg caagttgtgt
      901 cggttccggg actactacct gggactcgga tcgctggctg gtcgagtcgg cttgggccgg
      961 cccgttcgcc aggatgttca gttgcacgct gcgcctcgaa agggctgagt catttaatgt
     1021 acgcccacac cgtcggttcc gtccggtacc attggcggat ctccgtactc tgcttgccag
     1081 ggctacaccg gcgctgctgg tcaacaccgt cgtcgggttc atcgggccgg agtaccttta
     1141 ggacggccga tctggacgcg aggtgctcgg cttggcggta acgatctcaa ctgtgaggca
     1201 aacatgcgtg cgctcttcgc cctcctcgcc ctgctcggcg tggcgggtat tgctctcggc
     1261 gtcctgacca ttgtccgcgg gatgagcggc ccggccggca agccgttcag cttcgagaac
     1321 tacggtggtc cagggcctat catcgcggga ctgatcgttc tggcggcaac cttgtacctt
     1381 cgctcgatct ggaaacccag ggattgaacc tggtgcgcgt agtccccctc acgatcggag
     1441 tcgatcatgc gtccgctcac actcgtaggg attctccttc tggccctcgg ggcgttcgtc
     1501 ctgttccggg gcatgagcta caagtccaag gacgaggtgc tcagggtcgg tgatctcaag
     1561 gcatcagtgg aagagagaca cgcggtccca acctgggtcg gaggcctggc catcgtcgcc
     1621 ggtatcgttc tcatcgccgg cggcatgaag cggcgcgtct gattccagtg ggctcgtcga
     1681 gctaccagcg aatctatgcc gtagtcagtc gaatccccga gggacgcgtc gcgacatacg
     1741 ggcaggtcgc ctccctcgct ggcctcgcgg gtcaggcccg ccaggtcggt tacgctcttc
     1801 acgcgctgcc ggacgggacg gccgtcccct ggcaccgggt agtaaacgcg agcggtgaaa
     1861 tcagtctccg ctcgatgccc ggcggtgagc tggtccagcg ggcactcctc gagcgcgagg
     1921 gtatccggct cgacccgcgc gggcgggtct ctctcgcccg ggtgcgctgg ctgccgcgat
     1981 tcaagacgat tcgatgattg tgcatctgct gggtgttccg atggatctcg gatcgggacg
     2041 acgcggagtg gacatggggc cctccgccat tcgcattgcg ggagtcgccg atcgtctcag
     2101 ggaactcggg cacaaggtgg tggacgaggg tgacgtcgtc atcaagaaca tggaggagct
     2161 caaggtaggt cacgagcgtg cccggtatct caccgagatt gcccgtgcgg ctgccatcct
     2221 tgctcgcaag atcgagcgga tcatggggct gggtcacttc ccgctggtcc tgggcggcga
     2281 tcattcgatt gcggtgggca ccgtttcggg gattgcggcc catgctcagc ggcagaacca
     2341 gagggtggga ctgctctgga tcgatgccca tggcgacatc aacactcccg agacctctcc
     2401 ctcgggcaac attcacggca tgccgttggc agccctactg ggcttcggtg ccggtgagct
     2461 gaccagcgtg gcgggcccgc cgcccaaggt gcacgcggcc aatgtcgcgc tggtcgggat
     2521 ccggagcctg gatg
//
LOCUS       DASYRV010000353        11750 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1383399, whole genome shotgun sequence.
ACCESSION   DASYRV010000353 DASYRV010000000
VERSION     DASYRV010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11750
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1383399"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(248..1030)
                     /gene="nth"
                     /locus_tag="VGQ24_09330"
     CDS             complement(248..1030)
                     /gene="nth"
                     /locus_tag="VGQ24_09330"
                     /inference="COORDINATES: protein motif:HMM:TIGR01083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEV8455080.1"
                     /translation="MKGGKAGRRKGGKVVTADRRKSKRPGRPLPGAPVKAKARPNGKA
                     GTALPPYRPTASAPEILALLKEQYPDARCALEHRNAYELLCATILSAQCTDVRVNMVT
                     PTLFSRYPTPFELARAEPADVEEIIKSTGFFRNKTKSLIGMAQAVVADHNGEVPRTME
                     ELRRLPGVGRKTANVVLGNAYNINEGVTVDTHVARLSGLLGLTGELDPVKVEQDLMKL
                     FPQADWGLLSHLLIFHGRQVCIARRPRCGECVLAQLCPSARL"
     gene            complement(1027..2814)
                     /gene="polX"
                     /locus_tag="VGQ24_09335"
     CDS             complement(1027..2814)
                     /gene="polX"
                     /locus_tag="VGQ24_09335"
                     /inference="COORDINATES: protein motif:HMM:NF006375.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase/3'-5' exonuclease PolX"
                     /protein_id="HEV8455081.1"
                     /translation="MAYPNAAGAVIGGGEPMESVKDYMDKKAVAQVLEQIAAFLELKS
                     ENPFRIRAFRTAARALSTFPRDLRQSLEDGSLASAKGVGPATLQIVTELVGTGRASML
                     EDLREQIPPGLVEMLEISGLGVAKIRQIHEVLGIDSLPELEAAALDGRLAKLPRFGPR
                     TSENVLKAIAFLRQASAYRLSHHAADEAEGLRAALGRLPGVMSAIIAGDVRRRSEVVR
                     DLVIVLVAESSPAELFRRLSQLPGVHEYAGQDERRLTLRFAGGASAQVVATTPVNAGA
                     VLVQATGSEGHLRELAAYAGARGFGLNGAALWRGSQFVATTDENAFYHALGLSFIPPE
                     LREGRGEVAAAERQQLPRLVEGKDVRGFLHCHTRYSDGSNTVEELALACQAAGYDYLG
                     VTDHSQAAAYAGGLRPDDLARQGDEIDEVNSRLTGFRVLKGVEADILQDGRIDYDEQV
                     LERLDFVIASVHSRFNMGQREMTARMLAAMDNPYLTIIGHPTGRLLLSRDPYPLDLDA
                     VIEKAAATGVALEINADPHRLDLDWRVVREARDKGVAISIGADAHNVAGIGYVEYGIG
                     MARKGWLVADDILNARPVDEFVAYARRRR"
     gene            complement(2754..3443)
                     /locus_tag="VGQ24_09340"
     CDS             complement(2754..3443)
                     /locus_tag="VGQ24_09340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455082.1"
                     /translation="MPSPRPTPFDLVFDDTARSVLPDISGALSQSGAEPRDRDAFLMV
                     REVVTLLHQLRPEEGLGEAIDQLAALIHHSYLFWAAGCPVVELPTEHLGDLLGASPPD
                     AEEHPEPPAYYVQLPERRIWAQAVTGVPPEPLDGCFVHVLPEETSLRVLGVFGLHRER
                     AGFTVVEVAGIRPVALVRPDGSPLFSPTLPGGAAARLFSLAGGEELLELGWRTRTLLV
                     PSSAEVSRWKA"
     gene            complement(3568..4407)
                     /locus_tag="VGQ24_09345"
     CDS             complement(3568..4407)
                     /locus_tag="VGQ24_09345"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEV8455083.1"
                     /translation="MANNAQTRMRAVRGVEIFERRIGSGPPAVTLHGGPGAHHDYLLP
                     GFDALAHDRELIYYDQRGGGQSQVPRETPVGWREQAADLEELRRQWGLETLTIIGYSW
                     GGLLAQLYATEFPQRVGRLALVSPAPAWREMRLEFERRFAERNLAPALQQQRAELRAS
                     ALREKNPEEYAQRVFELSVAPYFYDPARARDLTPFRVTGRTQQEVWSSLGNYDLRPAL
                     AGLDVPAIVLQGEDDPIPLEATRTVARLLKAELHLLPRCGHVPYIEAHEEFVRLLEGF
                     LVR"
     gene            complement(4689..5138)
                     /locus_tag="VGQ24_09350"
     CDS             complement(4689..5138)
                     /locus_tag="VGQ24_09350"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEV8455084.1"
                     /translation="MLDSDRIVAALRGAFAREEGRQGLLRIAAEKIRAAGPPYTSVYL
                     YMLHGNELVLESHAGRDTDHTRIPVGMGVCGTAVAMGKDQNVPDVRAVENYLACNSWT
                     RSELVVLIRRGTLILGQIDIDSDVPDPFTPEEEAAVKQVADALAILL"
     gene            complement(5148..6419)
                     /locus_tag="VGQ24_09355"
     CDS             complement(5148..6419)
                     /locus_tag="VGQ24_09355"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEV8455085.1"
                     /translation="MPRIALLSLVVLISMGGGLQAQRITQPPRLLDDIKFLSDDRLQG
                     RVTGSPGADSSAAYLARRFSEVGLQPAAGGWFQSFTIGRDAPTARQAQGGGLAGKNVI
                     GILPGRDPVLRNQTVVLGAHYDHLGLGGFGSLDPDSTGMVHNGADDNASGVAALIQVA
                     ARLAVSPPARTVVFIAFSGEELGLLGSAHYVKEPIYPLAGTLAMVNLDMVGRLRNGRL
                     IVYGARSAKEFPALLDSLNWYAGFDLKPQGDGYGPSDQSSFYSAKRPVLHLFTDLHED
                     YHRTTDDWQKINLDGLKRVSDFTLGLVTALANRPRQLTFQDLPAPLPPQTTAPSASPG
                     YGAYLGTVPDMTGTPGGVRLVGVRAGSPAEKAGLRGDDIITRIGPMETPDLQAMTDAL
                     RSHRPGETVEILVRRGAGVTTVRATLGTRGG"
     gene            complement(6447..7514)
                     /locus_tag="VGQ24_09360"
     CDS             complement(6447..7514)
                     /locus_tag="VGQ24_09360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HEV8455086.1"
                     /translation="MTPESIGFLKLLLDTPGPSSFEAAPGKVWRAEAEKFAHSVHADV
                     AGNSFATLEDGGRPRLMFAGHIDEIGVMVTHIDDEGFLSFDTIGGWDHQVFVGQRVVL
                     LGRQGQVIGVVGKKAIHIMEREEREKVSKVEDLWIDIGAVSRAEAAARIRIGDPGVLA
                     AGVLEFPNGRLVSRSIDNRIGAFVVLEALRILSHDRPGASVTAVATTREEIAATGGGA
                     RSSANQLEPDVAIVIDVTHATDHPCIEKRKHGDFRLGGGPVLSRGASVSELVFDLLVE
                     TAEAEQIPYSIEAASRDTHTDAEAIFNAHRGVATALVSVPNRYMHSPNEMVALEDLDR
                     TARLLAAFARKLSPETSFVPR"
     gene            complement(7504..7680)
                     /locus_tag="VGQ24_09365"
     CDS             complement(7504..7680)
                     /locus_tag="VGQ24_09365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455087.1"
                     /translation="MATGSALLTIRDAHEGEALAALLLHPLLGFREIAPYPTNPVKGA
                     VFLELQLDPSPHDP"
     gene            complement(7656..8549)
                     /locus_tag="VGQ24_09370"
     CDS             complement(7656..8549)
                     /locus_tag="VGQ24_09370"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEV8455088.1"
                     /translation="MRVVTLLPAGTEIVAALGGAGHLVGISHECDYPPSVQGLPRVTT
                     TPIDATSSGGTIDAEVRRLREAGRPVIAVDGDQIQRLRPDLIITQGLCEVCAVSEGEV
                     YRLAEAIHPAPRVLSLAAHDLRGIWRDIHDVGTALDLSDEAEELVLGLQNRLRRLRTL
                     TPSPSPRVLCIEWLEPLYLAGHWVPALVAAAGGEDVGARAGSHSARREWAELPALHPD
                     HVLVMLCGFGTDRARAELDALDHPEALALLGRVPTWILDGNQYTSRPGPRVVDGAELI
                     GAVLAGVSAGEVERWRPAVRC"
     gene            complement(8550..8975)
                     /locus_tag="VGQ24_09375"
     CDS             complement(8550..8975)
                     /locus_tag="VGQ24_09375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455089.1"
                     /translation="MPPEAPVSPAISARILHAALMLGVFAFYALAWFVGTKTSMPISA
                     VPDRRILYLGLFLVSAIVFGAAVYTASRLTPAGAGTSQDDWWRANLGRAIVVWSLIEA
                     PTLLGTLAYLLTHDFRTLIATLAGLLFLVNYRPSRLAEG"
     gene            complement(8975..11170)
                     /locus_tag="VGQ24_09380"
     CDS             complement(8975..11170)
                     /locus_tag="VGQ24_09380"
                     /inference="COORDINATES: protein motif:HMM:TIGR00733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HEV8455090.1"
                     /translation="MATQTRPVTPPPVTLEFKPYVAPAQSPAELTLRAVILGAILGIV
                     FAASSVYLALKIGLTVSASIPIAVLAVAFFRTLGKSTILENNIVQTTGSAGESIAAGI
                     VFTLPAILLMGYDLTVSKVAVIAVIGGLLGILMMIPLRRALIVKEHGNLPYPEGTACA
                     EVLIAGDKGGLQARLLFQAFGIAFLYKFLMAGLKLWKEYPGRVSTFYKGASISAEVSP
                     ELLGVGYIIGPRIAGYLFAGGSLAYLVLIPAIKLFGSGLTQPIFAETKLIKDMSPAEI
                     RAAFVFYIGAGAVASAGIIALLRALPTIVSAFRSGFQDLKGSMGEAASRLRTDTDLPI
                     WITIAGSIGLALLLTVLPQVGVNLLGAMLIIVFGFFFVVVSSRITGEIGVSANPISGM
                     TIAALIGTTTIFLLIGWTGVDHRVAALSIAGVIAVAAGNAGATSQDLKTGFLVGSTPK
                     RQQIAIMVGAITSALAIGWTITLLNSTYTNVVPERHPGVTLQAAPPGAADRSVTGTGE
                     RMRHQGKEWEVVRVNIPTQGVQPGKYLLDSQSHEVAFLVDPGIGGRVRELDGKPITKL
                     DSPKATIMALVTDGILTRRLPWGLVLIGVFLTLAIELMGLQSLPIAVGVYLPISTSAP
                     MFIGGVVRSLVERRLRSGSRSLAEVESGPGVLFSSGLIAGGAIAGVVIAGIAATLVAR
                     AEAAQVPAADYLAHMVGLQGVLGGFATSDIAALVMFALLGGVLYRVARR"
BASE COUNT         2085 a         3897 c         3799 g         1969 t
ORIGIN      
        1 cggctatcgg ggtgccacga tcctgataaa aaggctgggg tgcaacgact aacacccgcc
       61 ggtaagcggg tgcggctaaa tcgctgggcg cggcggcaat gccggcgcgc tcgggctccg
      121 ctacctcacc gcgggcaaca gcttgtccgc tgatcagctt cacggctcac ttttgaaaat
      181 cggggggaag gcggtaaacc taaccggtgg accagagtgc aagaaccctg cccgtaggga
      241 atgccggtca cagcctcgct gaggggcaga gttgggccaa aacacactcc ccgcatctcg
      301 ggcggcgggc tatgcagacc tgtcggccat ggaagatgag gaggtgcgac agaagccccc
      361 agtctgcttg gggaaagagc ttcatcaggt cctgctccac cttgaccgga tccagctctc
      421 cggtcagacc aaggagccca ctgaggcggg caacgtgagt gtctacggtc accccctcgt
      481 tgatgttgta cgcattcccc agcaccacgt tcgcggtctt acgaccaact cccggtagcc
      541 ggcggagctc ttccatagtc cggggaacct cgccgttgtg atcggctacc accgcctgag
      601 ccatccctat gaggcttttc gtcttattgc gaaagaaacc ggtggacttg atgatctcct
      661 cgacatcagc tggctctgcc cgggccagct cgaacggtgt cgggtagcgt gagaacagtg
      721 tgggagtgac catattgacc cgcacgtcgg tgcattgggc cgagaggatt gtggcgcaga
      781 gcagctcgta ggcgttccgg tgttcgaggg cgcagcgcgc gtcggggtac tgctccttca
      841 agagagcgag gatctcaggg gcggaggcgg tagggcggta aggcggtagg gcggtaccag
      901 ccttcccatt tggccgcgcc ttcgccttga ctggtgcccc cggcaacggc cggccaggac
      961 gtttcgactt ccgtcggtcc gccgttacca cttttccgcc tttccgcctt cccgccttcc
     1021 cgcctttcac cgccgcctcc gcgcgtatgc cacgaactcg tccaccggcc tcgcgttcag
     1081 gatgtcgtcc gccaccagcc aacccttcct tgccatgccg atgccgtact cgacatatcc
     1141 gatgccggcg acgttgtggg cgtcggcacc gatggagatc gccacgccct tgtcgcgcgc
     1201 ctctcgaacc acccgccaat cgagatcgag ccgatgcgga tcggcgttga tctcgagagc
     1261 gacaccggtg gccgcagcct tctcgatcac ggcatccagg tcgagagggt agggatcccg
     1321 ggataggagc agccgcccgg ttggatgacc gatgatcgtc agataggggt tgtccatagc
     1381 ggcgagcatc cgcgcggtca tttctcgctg ccccatgttg aaccggctgt gcaccgacgc
     1441 gatcacgaaa tccagccgct ccagcacctg ctcgtcgtag tcgatccggc catcctggag
     1501 gatgtcggcc tcgactccct tcagcaccct aaaaccggtc agccggctgt tcacctcatc
     1561 gatctcatct ccctgccggg caagatcgtc tggccggagt ccgccggcat acgcagccgc
     1621 ctggctgtgg tcggtcacgc cgagataatc gtacccggct gcctggcaag ccagcgccag
     1681 ctcctccacc gtattggatc catcagagta gcgggtgtga cagtgcagga atccccggac
     1741 atccttgccc tccaccagcc ggggaagttg ctgccgctcg gccgccgcta cctctcccct
     1801 gccttcccgc agctccggcg gaatgaagct cagccccagg gcatggtaga aggcgttctc
     1861 gtcggtcgta gcgacgaact ggcttccccg ccagagcgcc gccccgttca gaccgaatcc
     1921 tcgtgcgccg gcgtaggcag ccagctctcg caggtgtccc tcactcccgg tggcctgcac
     1981 caggaccgcg ccggcgttga ccggcgtcgt ggcgacgact tgagcgctgg caccgccggc
     2041 aaacctgagt gtcagccggc gctcatcctg gccggcgtac tcgtggactc cgggcagctg
     2101 gctcagccgg cgaaacagct cggcaggaga cgattcggcc accagcacga tgacgaggtc
     2161 ccttacgact tccgatcgcc gcctcacgtc cccggcgatg atcgcgctca tcacgcctgg
     2221 cagccgtccg agtgcagcgc gcaggccttc agcctcgtcg gcggcgtggt gggagagccg
     2281 gtaggcgctg gcctggcgca gaaacgcgat ggccttgagc acgttctcgg aggtcctcgg
     2341 cccgaaccga ggcagtttcg ctagccggcc gtcaagggcg gcagcctcca gctcgggaag
     2401 cgagtcgatg ccgagcacct cgtggatctg ccggatcttg gccacgccga ggcccgagat
     2461 ctccagcatc tcgaccagcc ccggcggaat ctgctcacgc aagtcctcga gcatgctcgc
     2521 tcgcccggtc cccaccagct cggtgacgat ctgcaacgtg gcggggccga cgcccttggc
     2581 cgacgcgagg gatccatctt ccagcgactg gcgcaagtca cggggaaagg tgctgagggc
     2641 ccgggcggca gtccgaaatg cccggatccg aaaaggattt tcgctcttga gctccagaaa
     2701 ggcggcaatc tgctccagca cctgggcgac cgccttcttg tccatgtagt cctttacgct
     2761 ttccatcggc tcacctccgc cgatgacggc accagcagcg ttcgggtacg ccaaccgagc
     2821 tccagcagct cctctccgcc ggcaagggag aacagtcgtg ccgctgctcc tcccggcagg
     2881 gtgggtgaga agagcgggct gccatcgggt ctgaccagcg cgactggacg gattccggcc
     2941 acctcgacca cggtaaatcc agcgcgctcg cggtgtaaac cgaacacgcc caggactctg
     3001 agcgatgtct cctccggtaa gacatgtaca aagcagccgt ccagtggctc cggagggact
     3061 cccgtcacgg cttgcgccca gatccgtcgc tccggaagct ggacgtaata cgccggcggc
     3121 tccgggtgct cttcggcgtc tggtggcgag gcgccgagca ggtcacccag atgctcggtg
     3181 ggtagctcga cgaccgggca gcccgcggcc cagaacagat acgagtggtg tatcagggcc
     3241 gcgagctggt cgatggcttc gcccagacct tcctccggcc gaagctggtg cagcagggtc
     3301 accacctccc gtaccatcag aaaggcatcc cggtcgcgcg gctcggcgcc ggactggctc
     3361 agcgcgccgc tgatgtcggg caagacgctg cgggcagtat catcgaagac aaggtcgaac
     3421 ggggtggggc gcggggaggg catggtggga aatttagtcg cgagtggggg gtaacgagtc
     3481 taaagtcacg agtcacgaga ttcttcccgt aggaggatac cagtcggggg gctcccggat
     3541 ttgtgactcg cgactctcga ctcgtgacta cctgaccaaa aacccttcca gcaatcgcac
     3601 aaattcctca tgcgcctcga tatacggcac gtggccgcat cggggcagca ggtgaagctc
     3661 tgccttgagg agtcgggcca cggtgcgggt cgcctcgagc gggatcgggt cgtcttcgcc
     3721 ctggagtacg atggccggga cgtcaaggcc ggcgagggcc ggccggagat cgtagttgcc
     3781 caggctggac cagacctcct gctgggtacg acccgtcacc cggaaggggg tgaggtcgcg
     3841 cgcgcgggct gggtcgtaga aatagggggc caccgagagc tcgaacaccc gctgtgcata
     3901 ttcctccgga ttcttctccc gcagagcgct ggccctgagc tcggcccgct gctgctggag
     3961 agcgggggcc aggttccgtt cggcaaagcg gcgctcgaat tcgagacgca tctcccgcca
     4021 cgcgggcgcc ggcgagacca gcgccagtcg gccgacccgc tgggggaact cggttgcgta
     4081 cagctgggcc agcaatccgc cccaggagta accaatgatc gtgagcgtct ctaagcccca
     4141 ctgccggcgg agttcctcga gatcggccgc ctgctcccgc cagccaaccg gtgtctcccg
     4201 cggcacctgc gattgcccgc cgccccgctg gtcgtaatag atcagctcac gatcatgcgc
     4261 gagcgcatcg aatccgggta ggagatagtc gtggtgggcg ccggggccgc cgtgaagcgt
     4321 cacggccggt ggtccactgc cgattcggcg ttcgaagatc tcgacgccac gtacagcacg
     4381 catgcgggtc tgagcgttgt tcgccatcac tccacccagc ccccgtcagc gggttgggcc
     4441 gccccctccg gcttcgagtg cctgacatcc tccctcccgc caccccttac actcagcctc
     4501 cgaggcttgg cccaacccgc tggctccccc tcgccgtagc gcgagaaacc cacaacagtc
     4561 cacatgaacg gggtggggcg gccaacgatc cgggcgagtc cgaaggctga gtgtaagggg
     4621 tggtggcggg gggaagtcag acacttgaag ccggagggcc gtccggatcg ctggccgggc
     4681 tgggcggctc ataacagtat cgccagtgca tccgccactt gcttcaccgc ggcctcttcc
     4741 tcgggcgtga acggatcagg cacatcgctg tcgatgtcga tctggcccag aatcagggtc
     4801 ccgcgccgta tcagcaccac cagctctgaa cgagtccagc tgttgcacgc gaggtaattc
     4861 tcgactgcgc ggacatcggg cacgttctgg tccttgccca tcgccactgc agtcccgcac
     4921 acgcccatgc cgaccgggat ccgggtgtgg tcggtgtccc gcccggcatg cgactcgagt
     4981 accagctcgt tcccgtggag catgtagaga tagaccgagg tgtacggagg acccgcggcg
     5041 cggatcttct cggccgcgat ccggagcagg ccctggcggc cttcctcccg cgcgaacgct
     5101 ccccgcaggg cagcgacgat cctatcgctg tcgagcaccg gcatccctca acccccccgc
     5161 gtgccgagtg tggctcgtac ggtggtgacg ccggcgccgc gcctcaccag gatctcgacc
     5221 gtttccccgg gacggtggct ccgcagcgca tcggtcatcg cctggagatc cggagtttcc
     5281 atcgggccga tgcgggtgat gatgtcgtcg cctcgtagcc ccgctttctc ggccgggctc
     5341 cctgctctga cgccgaccag ccgcactccc cccggggtgc cggtcatgtc ggggacggtt
     5401 ccgaggtagg cgccgtaccc ggggcttgcg ctgggcgcag tggtttgcgg cgggagtgga
     5461 gccggcaggt cctgaaaggt gagctgtcgc ggccggttcg cgagcgccgt taccaggccc
     5521 agagtgaagt cggagacccg cttcagtccg tcgagattga tcttctgcca gtcgtccgtg
     5581 gtgcgatggt agtcctcatg aagatcggtg aagagatgca acaccggccg cttggcggag
     5641 tagaacgagg attgatcgct tggaccgtac ccgtcgccct gcggcttgag atcgaacccc
     5701 gcgtaccagt tgagcgaatc cagcagagcc gggaactcct tcgcgctgcg ggccccgtac
     5761 acgatgagtc ggccgttccg gagacgccca accatgtcga ggttgaccat ggccagcgtg
     5821 ccggccagcg gataaatcgg ctccttcaca taatgggccg agcccagaag gccgagctcc
     5881 tctccgctga aggcgatgaa gaccacggta cgtgccggcg gtgagacggc caggcgcgcc
     5941 gccacctgga tcaacgccgc cactccggag gcattgtcgt ccgccccatt gtgaaccata
     6001 cccgtgctat cggggtccaa gctgccgaac ccgccaaggc ccagatgatc gtaatgtgca
     6061 cccaggacga cggtctgatt ccggagtacc gggtccctgc cgggcaggat gccgatcacg
     6121 ttcttgccgg ccagcccgcc gccttgggcc tgcctggccg tgggcgcgtc acgcccgatc
     6181 gtgaacgact ggaaccatcc tcccgcagcc ggctgaagtc cgacttcgga gaaccggcgc
     6241 gccaggtagg cggcagacga atccgctccg ggagagccgg tgaccctgcc ctggagccgg
     6301 tcatcgctga gaaacttgat gtcgtcgagc aggcggggag gctgggtgat ccgctgggct
     6361 tgaaggccac cgcccatgga tatcagcacg acaagagaga gcagagcgat gcggggcata
     6421 gaatcaggag aatatagacg tgccgactaa cgcggaacga agctggtctc ggggctcagc
     6481 tttcgggcaa aggcagcgag cagccgagcg gtacgatcga ggtcttccag cgccaccatc
     6541 tcgttgggac tgtgcatgta gcggttgggc accgacacca gcgccgtggc cacgccgcgg
     6601 tgggcgttga agatcgcctc ggcgtcggta tgagtgtcgc gcgacgctgc ttcaatgctg
     6661 taggggatct gctccgcctc ggccgtctct accagcaggt cgaagacaag ctcgctgact
     6721 gacgctcccc tggagaggac gggaccgccg cccaggcgaa agtcgccatg cttccgcttc
     6781 tcgatgcagg gatggtcggt tgcgtgggtc acgtcgatca cgatcgcgac gtcgggctcc
     6841 agctggttgg ccgacgacct ggcgcctccc ccggttgccg cgatctcttc ccgggtggtt
     6901 gcgaccgccg tcacagacgc acccggacgg tcgtgcgaga ggatccgcag cgcctccagg
     6961 accacgaagg cgccaatgcg gttatcgatg ctccggctca ccaatctgcc gttggggaac
     7021 tcgaggacgc cggcggccag tacaccagga tcgccgatcc ggatccgggc cgccgcctct
     7081 gcccgcgaca ccgccccgat atcgatccag aggtcttcca ccttggagac cttctcccgc
     7141 tcttctcgct ccatgatgtg gatggccttt ttccccacga caccgatgac ctgcccctgg
     7201 cggccaagca ggacgacccg ttgccccacg aatacctgat ggtcccatcc accgatcgtg
     7261 tcaaagctga gaaagccctc gtcatcgatg tgagtgacca ttaccccgat ctcatcgatg
     7321 tgcccggcga acatgagccg gggacgtccg ccatcctcga gtgtcgcgaa cgagttaccg
     7381 gccacatcgg cgtgcaccga gtgggcaaac ttctccgctt cggctcgcca gaccttgccc
     7441 ggcgccgcct cgaacgacga aggcccgggt gtatccaaca acaacttcag gaacccgatg
     7501 gattcagggg tcatgaggag atggatccag ttgcagctcc aggaacacgg ctccctttac
     7561 cgggttggtc gggtacgggg cgatctcccg aaagccgagc agcgggtgga gcaggagcgc
     7621 cgcgagtgcc tcgccctcgt gagcatcccg gatggtcagc agcgcactgc cggtcgccat
     7681 cgttccacct ctcccgccga aaccccagcc agtactgccc cgatcagctc ggcgccatcg
     7741 accactcttg gtccgggccg agaggtgtac tggttcccgt ccaggatcca ggtaggcacc
     7801 cgccccagga gggcgagtgc ttcagggtgg tccaaggcat cgagctcggc gcgtgcgcgg
     7861 tcggtcccga atccacacag cataacgagc acatgatccg ggtgaagcgc cgggagctcg
     7921 gcccattctc gcctggccga gtggcttccc gcgcgggctc ccacatcctc tccgccggcc
     7981 gccgccacca gcgcgggcac ccagtggccg gccaggtaca gcggctcgag ccactcgatg
     8041 caaagaactc gcggagaggg cgagggggtg agcgttcgga gcctccggag ccggttttgg
     8101 agcccgagga ccagctcttc agcctcatcg gacaggtcca gtgccgtccc tacatcgtgg
     8161 atgtcgcgcc agattccccg gaggtcatgc gcagcaagtg acaggacgcg tggagccgga
     8221 tggatcgctt ccgccagccg gtacacctcg ccctccgaca ctgcacaaac ctcgcacagc
     8281 ccctgggtga tgatgagatc gggccggagc ctctggatct ggtcgccatc gacggcgatt
     8341 accgggcggc cagcctccct gaggcgacgc acttctgcat cgatcgttcc gcccgatgac
     8401 gttgcgtcga tcggcgtggt cgtgacccgg ggcaacccct ggaccgaagg cggataatcg
     8461 cactcgtgtg agatccccac gaggtgtccg gcgcctccga gcgcggccac gatctcggtc
     8521 ccggccggca gcagcgtgac gacgcgcact cacccctcgg cgagtcggct gggccggtag
     8581 ttcaccagaa atagcagccc cgccaatgtg gcgatcaggg tccgaaagtc gtgggtcaga
     8641 agataggcga gcgttcccag aagagtcggt gcctcgatca ggctccacac gacaatggct
     8701 cgaccgaggt tggctcgcca ccagtcgtcc tgcgaggtac cggcgccggc gggagtgaga
     8761 cggcttgcgg tgtacaccgc ggccccgaag acgatcgcac tcaccagaaa caggcccaag
     8821 tagagtatcc gtcgatcggg aaccgcggag atcggcatcg aagtcttcgt cccgacgaac
     8881 caggccagcg cgtagaacgc gaatacccca agcatcagcg ccgcgtggag gatccttgcg
     8941 ctgatcgcgg gcgataccgg agcttccgga ggcattaccg cctcgcgact cggtagagca
     9001 ctccccccaa gagcgcgaac atcacgagtg ccgcgatgtc gctggtcgcg aagcctccga
     9061 gcaccccctg aaggccgacc atgtgcgcga gataatccgc ggcgggcacc tgcgcggcct
     9121 cagcgcgtgc gaccagcgtg gccgcgatac ccgcgatgac gacgcccgcg atcgctccgc
     9181 cggcgatgag cccgctggag aagagcaccc cgggtcccga ttccacttcg gccagcgacc
     9241 gggagccgct tctgagccgc cgctccacca gcgagcgcac gaccccacca ataaacatcg
     9301 gtgccgaggt cgaaatcggc aggtagactc ccacggcaat cggcagggac tggaggccca
     9361 tcagctcgat agcgagcgtc aggaagacgc cgatcaggac gaggccccag ggcagtctcc
     9421 gggtcaggat gccatcggta accagcgcca tgatcgtggc cttcggcgag tcgagcttgg
     9481 tgatcggctt gccgtcgagc tcccgtaccc ggccgccgat cccgggatcg accaggaagg
     9541 ccacctcgtg actctgagag tcgagcaggt acttgcccgg ctggaccccc tgagtcggga
     9601 tgttcacccg gaccacctcc cactccttgc cctgatgtcg catccgctcg ccggtgccgg
     9661 tcaccgagcg atccgcggca ccaggaggcg cggcctggag cgtcaccccc ggatgacgtt
     9721 ccgggaccac gttggtgtag gtgctgttga gcaaggtgat ggtccagccg atggccagcg
     9781 ctgaggtgat ggcgccgacc atgatcgcta tctgctgccg cttcggggtc gaccccacca
     9841 ggaatccggt cttgaggtcc tgactggtcg cgccggcatt cccggccgcc acggcgatga
     9901 caccggcgat agagagagcg gccacccggt ggtccactcc ggtccagccg atgagcagga
     9961 agatggtcgt cgtgccgatc agcgcggcga tggtcatgcc ggagatcggg ttggcgctca
    10021 ccccgatctc gccggtgatc cgggacgaga ccaccacgaa aaagaacccg aagacgatga
    10081 tgagcatggc gccgagcagg ttgacgccaa cctgagggag aaccgtgagc agcagtgcga
    10141 ggccgatcga ccccgcaata gtgatccaga tcggcaaatc ggtgtcggtt ctgagccggc
    10201 tggccgcttc gcccatgctg cccttcaggt cctggaagcc ggagcggaac gccgacacga
    10261 tggtgggcag ggctcgcagc agggcgatga ttccggccga ggccaccgcg ccggccccga
    10321 tgtagaagac gaacgcggcc cggatctcgg ctgggctcat gtccttgatg agcttggtct
    10381 cggcaaagat cggctgggtc aggccggagc cgaacagctt gatggcagga atcaggacca
    10441 gataggcgag ggaaccaccg gcgaacagat atcccgcgat ccgcggcccg atgatgtagc
    10501 cgacgccgag cagctcgggc gagacctccg ccgagatcga ggcacccttg tagaaggtcg
    10561 aaacccgccc gggatactcc ttccagagct tcagccccgc catgaggaac ttgtagagga
    10621 acgcgatccc gaacgcctgg aagaggaggc gcgcctggag tccgcccttg tcgcccgcga
    10681 tcagcacctc ggcgcaggca gtcccctccg gataggggag attgccgtgc tccttcacga
    10741 tcagggcgcg gcggagcggg atcatcatca gaatgccgag caagccgccg atgaccgcga
    10801 tcaccgccac cttgctcacg gtgagatcgt aacccatcaa cagaatggcg gggagcgtga
    10861 acacgatccc cgccgcaatg gactcgccgg ccgagccggt ggtctggacg atgttgtttt
    10921 ccaggatcgt cgacttgccc agggtccgga agaaagccac cgcgagcacc gcgatgggga
    10981 tcgaggcgga gacggtgagg ccgatcttga gcgcgagata cacgctcgat gcggcgaaga
    11041 cgatgcccag aatcgcgccg aggatcaccg cacgaagggt cagctcggca ggggattgtg
    11101 cgggcgcgac gtagggcttg aactcgaggg tcaccggtgg tggagtgacg ggccgggtct
    11161 gggtcgccat gcagtgcctt ggagtcggta gggaaacggc cgcgagttcg cgtcaggaat
    11221 acgagctcgt tgaaagtagg gaacccaaga ggggacgtcc agcgagcccc ttcggataca
    11281 ggtattgagc gcctcttgcg ggggcaggat tcagggagta ccatgagtgc cgcttcgcgc
    11341 ctgcggccat tccagccggg gccccgtgcg ttcaagccaa gtcgtttgat attccgaact
    11401 tacgtttcga gcggagcgtc agctccgggg tccgaattgc gggtgaagtc tgtgctattc
    11461 ccacttacaa acgcgggcga gcgtgtcctc tgctttcagg gagccgctca ccattccaca
    11521 gttctcctcc cgcgtgcgca ctccactcct tttttcgttt cggctccctt cgcctcgggc
    11581 aatccgcttt ctggtctcct cctccaactc aggaagttcc tttatgaagc gccgtctcat
    11641 acttagtgtc gctgcggccc tcgttctcgg ggcttgtagc gagcagcaag agccgatcac
    11701 cgggaactcg aatccgggcg agctcgcctc gacctcgggg accaagccca
//
LOCUS       DASYRV010000354         6526 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1941831, whole genome shotgun sequence.
ACCESSION   DASYRV010000354 DASYRV010000000
VERSION     DASYRV010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6526
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1941831"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1223)
                     /locus_tag="VGQ24_09385"
     CDS             complement(<1..1223)
                     /locus_tag="VGQ24_09385"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEV8455091.1"
                     /translation="MFVSALYTLVAVGAGGMPGLPSHTISGRITDSAGTGIARVQVVV
                     LEVARLTRSDSAGRYVIPDLSDGTYGISFSAPGYAPMVRRVSLAGADLVLDVTLRQSL
                     VELPPMQVTASPIATTVLTSPQPTAVVAGSDLRAAQAPTLGETLNGLPGVHSLSTGVG
                     VGKPVIRGLTSNRVLVLDNGQRLETQQWGDEHGPNLETATADRIEVIRGPASVLYGSD
                     ALGGVINVVQRDLPQPGDGGSVVHGTISAAYGTNNRQPDGSFLLEGASGGFGFRATLS
                     GRRSKDLKTPAYTLWNSGNEAIGGSGVLGYHAAGGGSLLATFSQRNEKVFLTDEDPAE
                     TPTQRIATSRGRLDLTMPLGRYRLEADGGYERSRRREFEDKETSDVALGLLSKTWTGG
                     LRLHHPALGRFEGIIG"
     gene            complement(1329..1664)
                     /locus_tag="VGQ24_09390"
     CDS             complement(1329..1664)
                     /locus_tag="VGQ24_09390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455092.1"
                     /translation="MLRLRRPYAAFLLLATALAGGPGSAGVEAYQHAHRLRGHGHQIH
                     FEPRGGQDHDDACRAWWASVLLRAPAGALPTVRLRELSVFVVPLAAPALHSSPAALLP
                     LSRAPPLTV"
     gene            complement(1670..2491)
                     /locus_tag="VGQ24_09395"
     CDS             complement(1670..2491)
                     /locus_tag="VGQ24_09395"
                     /inference="COORDINATES: protein motif:HMM:NF013143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEV8455093.1"
                     /translation="MLDTILLFREALYGALVIGITCAVLSVYVVLRKIVFVGAALAQL
                     SSAGIALALWLSGVAAVSALGRYPTALSLIVTLCGALFFGLGGGRRLISGEASIGVAY
                     AVAAAAGILLIAKAVTGEAHDIFLQGNILGITRSDTLVLLAVSAPVLLLHAVFYKEFL
                     FVSFDRETARTLGYRVDVWNLLLYFTLGLVIASAMRFAGVLLVFNFLVLPAVSGLLLA
                     STMGGTIAWAVTSAIVAVGIGFSLSVPLDLPTAPAIIAVQGILVLIAWLMRRARD"
     gene            complement(2484..3242)
                     /locus_tag="VGQ24_09400"
     CDS             complement(2484..3242)
                     /locus_tag="VGQ24_09400"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HEV8455094.1"
                     /translation="MKRVLVSFDHATLGYGRTVVLRDISFTIPEGDFLGLVGPNGSGK
                     TTILRALLGTHAPLAGRVTVAPGLRFGYVPQRDQVDYDYPLTALDVVLMGRYDRIGLG
                     RRPSADDRAHALRALQQVGIPELADRHLRNLSGGQRQRTLMARALAGDPNILVLDEPT
                     NGMDLVSTTQILGLVRDLHERSGITVLMVSHALNEVANYVERIALVMNEAFRIGTVAE
                     IMNETVLSDMYGIPVEVSAFEGHRVVIARRRRSA"
     gene            complement(3239..4150)
                     /locus_tag="VGQ24_09405"
     CDS             complement(3239..4150)
                     /locus_tag="VGQ24_09405"
                     /inference="COORDINATES: protein motif:HMM:NF013465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HEV8455095.1"
                     /translation="MSRFIPLALLAASALVAGRPAEAQLRVVTSTTDLYDIARQVGGT
                     RIRAVHISEGYQDPHFVEAKPSFILQLQRADVFAFVGLDLEIGWMSLLVDGARNPKIR
                     MGGSGYVDVSKAIPVIDVPSGNIDRSQGDVHPLGNPHYWLDPDNAKRIARLFEDKFSE
                     LDPAGERTFEANRKSFEARLDAAERSWAAAVAKIKGKPVVAWHTSWRYFAEYTGLKIV
                     GFMEPKPGVPPSPSHLAGLILTMQRTGAKVIVMEPFYDKKTADFVAAKTGATVLVLPP
                     SVGGKKGLDDYLALMQYDISQLAAALQ"
     gene            complement(4158..5435)
                     /locus_tag="VGQ24_09410"
     CDS             complement(4158..5435)
                     /locus_tag="VGQ24_09410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455096.1"
                     /translation="MRALLIAVTVGLLGATTAAAQIPDSTRARARADSIARARADSIR
                     LVRELEALGRQDTTRPALPGQVRPTGSTNPRLLPDISAVGDLVADFSPQGSTQEDGGR
                     FNVREIELALQAAVDPYFRGDIFLGISDLEGIAIEQAFLTATALPGRLEGRLGRYLMP
                     IGKQNTTHRHDLHTVEYPYVLQRFLGEEGLKGTGLYLARVVSPLGFYQEIILTAVDRF
                     GEAPEDLVTAEPSNHKLSGLGYSARLRNYWDLSQATNIELSASAMTGRREQPLATAVG
                     DVNAALARQSLVGADFTFRWRPLQQGLYKSFLFQTEFFRQLNSDRPVLPAGVLPADYL
                     GPTRNFSGAYVFARYQLTRRGYFGGRFDWVQDPEADGARLLAGTALYEFFPSEFSKLL
                     AAVERRSLKDAGSTTRFLLQASFALGPHKPHPF"
     gene            complement(5907..>6526)
                     /locus_tag="VGQ24_09415"
     CDS             complement(5907..>6526)
                     /locus_tag="VGQ24_09415"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEV8455097.1"
                     /translation="RNGRHLLGLINNVLDLSKIEAGRMTVHLTRLDLRDSIRGAVADT
                     GSLRMAKRQTCTVEENPEPLEVVADHVRVRQILFNLLSNASKFTPEEGTISLSAVRTP
                     VPLPIPGERSGETPRLVTREAVWVSVRDSGIGVRAEDRDKLFKVFSQVDSSASRQQQG
                     TGLGLALCKQFVEMHGGAIGAESIFGEGSTFWFILPMEGPIRQPQ"
BASE COUNT         1222 a         2106 c         2132 g         1066 t
ORIGIN      
        1 ccgatgattc cttcgaacct gccaagcgcc gggtggtgca ggcggagccc acccgtccac
       61 gtcttggaga gcagccccag cgcgacgtcc gaagtttcct tgtcttcaaa ctcgcggcgc
      121 cggctgcgct cgtaaccccc atccgcctcg agccggtagc gtcccagcgg catggtgagg
      181 tcgagtcgtc cgcgactggt ggcgatccgc tgcgtggggg tctcggcggg atcttcatcg
      241 gtcagaaaaa ccttctcatt gcgctgtgaa aacgtcgcca acagggatcc tccgccggca
      301 gcatggtacc ccagcacgcc ggagccgccg atcgcttcgt tgccgctatt ccagagggtg
      361 taagcggggg tcttcaggtc cttgctccgg cggccgctca gagtggcgcg aaaaccaaat
      421 ccgccgctcg ccccctccag gagaaaagac ccgtccggct ggcgattgtt ggttccatag
      481 gcagcactga tcgtaccgtg cactaccgac ccgccatcgc cgggctgcgg caggtcgcgc
      541 tgcacgacgt tgatgacccc gccgagtgca tccgaaccgt agagaacgga cgcgggaccg
      601 cgaatgacct cgatgcggtc ggccgttgcg gtttccaggt tcggcccatg ctcatctccc
      661 cactgctgag tttccaggcg ttgcccattg tcgagcacca gcacccgatt cgaggtgaga
      721 ccgcggatga cgggcttccc gactcccacg ccggtgctga ggctatgcac acctggcagg
      781 ccattgagcg tttcgcctag cgtgggtgct tgtgcggcac gcaagtcact gcccgcgacg
      841 actgccgtcg gctgcggcga ggtgagtacg gtcgttgcaa tcggtgaggc ggtcacctgc
      901 atggggggta actcgaccag gctttgccgc agcgtgacat cgagcaccag gtcggcgccg
      961 gccaggctga cccggcgaac catcggggcg tagcctgggg cgctgaaaga gatgccatag
     1021 gtgccatcgg agagatcggg gatcacatag cgccccgccg aatcactccg ggtcaagcga
     1081 gctacttcga gcaccacgac ttggactcgg gcaattcctg tcccggccga gtcggtaatc
     1141 cgtccggaaa tggtatggct cggcaggccc ggcatcccgc cggctcccac tgccaccagg
     1201 gtgtacaacg ccgaaacgaa catcctcgtc tcctcccgca agggtgtggc cggctggcga
     1261 acaccggcgc gcgccggttc atgacggtgc gtcggatcgc gtcgcgagac gcggaacatc
     1321 cagtggcttc agaccgtcag gggaggagcg cgagagagcg gaagaagtgc tgcaggagag
     1381 gaatggagcg ctggcgcagc gagtgggacc acgaatactg acagctcgcg cagccgaacc
     1441 gtgggcagcg cacctgccgg agcgcgaagc agcaccgagg cccaccacgc ccggcaggca
     1501 tcgtcatgat cctgaccgcc gcgcggctcg aagtgaatct ggtgcccgtg ccctcggagc
     1561 cggtgggcgt gctggtacgc ctccactccc gcggacccgg gcccgccggc cagtgccgtc
     1621 gcgagcaaca ggaatgcagc gtaaggccgc cggagccgaa gcatcggccc tagtctcggg
     1681 cccggcgcat cagccaggcg atcagcacca ggattccttg aaccgcgatg atcgcgggcg
     1741 ccgtgggaag atcgagcgga accgagaggg agaagccgat tcccaccgcc acaatcgccg
     1801 aggtcaccgc ccaggcgatg gtgcccccca tcgtgcttgc cagcagcagg ccgctcaccg
     1861 cgggtaagac cagaaaattg aagacgagca gcacgcccgc gaagcgcatg gcgctggcaa
     1921 tgacgagccc cagggtgaag tacaacagca gattccagac atccacacgg tagccgaggg
     1981 tgcgagcggt ttccctgtcg aaggagacga agaggaattc tttataaaac accgcgtgca
     2041 ggagcagaac cggcgcgctg accgccagca ggaccagggt atcggagcgg gtgataccga
     2101 ggatatttcc ctggagaaaa atgtcgtgcg cctctccggt gacggccttc gcgatgagca
     2161 ggattcccgc cgccgccgcg acggcgtacg ccacgccgat ggatgcctca ccagagatca
     2221 atcgccggcc gccccccagg ccgaagaaca gcgcaccgca gagcgtcacg atcagggaca
     2281 gtgccgttgg ataccggccg agggcggaga ccgcggcaac gcccgagagc cagagagcca
     2341 gggcgatgcc ggccgaagaa agctgcgcca gcgcggcacc gacgaacacg atcttccgca
     2401 ggacgacgta cacgctcagc acggcgcagg tgatcccgat caccagggcg ccgtagagcg
     2461 cctcgcggaa gagcaggatg gtgtcaagca ctccggcgtc tccgcgcgat cacgacgcga
     2521 tgcccctcga aggcgctcac ctccacggga atgccgtaca tgtcgctcag caccgtctca
     2581 ttcatgatct ccgcgacggt cccgatgcgg aacgcctcgt tcatcaccag ggcgatccgc
     2641 tcgacgtagt tggcgacctc attgagggcg tggctcacca tcaggacggt gataccggaa
     2701 cgctcgtgga ggtcccgtac cagcccgagg atctgggtcg tggagaccag atccatcccg
     2761 ttggttggct cgtccagcac caggatgttg ggatcgcccg ccagggcgcg cgccatcagg
     2821 gtgcgttgtc gctgcccgcc cgagagattc cgaagatggc ggtcggccag ctcgggaatg
     2881 ccgacctgct gcagcgcgcg cagcgcgtgc gctcgatcgt ctgcgctggg ccggcgtccc
     2941 aggccgatgc ggtcgtagcg gcccatcagg accacgtcga gggcggtgag cgggtagtcg
     3001 tagtccacct gatcgcgctg ggggacgtaa ccgaagcgca gcccgggcgc tacggtcacc
     3061 ctgcccgcca gcggcgcatg ggttcccagc agggcccgca agatcgtcgt cttgccggag
     3121 ccgttcggac ccaccaggcc caggaaatcg ccctcgggaa tcgtgaagga gatgtcccgc
     3181 agcacgaccg tgcggccgta gccgagcgtc gcatggtcga agctgaccag cacgcgcttc
     3241 attgcagtgc ggcggcgagc tggctgatgt cgtactgcat caacgcgaga taatcgtcga
     3301 gacccttctt ccccccaacg gacggcggca ggaccagcac cgtcgcgccg gttttggccg
     3361 cgacgaagtc cgcggtcttc ttatcgtaga acggctccat cacgatcacc tttgccccgg
     3421 tgcgctgcat cgtgaggatc agccccgcaa ggtgcgaggg cgacggaggc actccgggct
     3481 tcggctccat gaacccgaca atcttcaggc ccgtgtactc cgcgaagtag cgccagctgg
     3541 tgtgccaggc gacgaccggc ttgcccttga tcttggcgac ggcggctgcc cacgaccgct
     3601 cggcggcatc cagtctggct tcgaagctct tacggttggc ctcaaaggtc cgttccccgg
     3661 cgggatcgag ctcgctgaac ttgtcttcga agagccgggc gattcgcttg gcgttgtccg
     3721 gatcgagcca gtaatgcgga ttgccgagcg ggtgtacgtc cccctgactg cggtcgatgt
     3781 tgccggaggg gacgtcgatc acgggaatcg ccttcgacac gtcgacgtaa ccgctgccac
     3841 ccatgcggat tttgggattg cgtgcgccgt ccaccaggag cgacatccag ccgatctcga
     3901 gatcgagccc cacgaaggcg aatacgtccg cgcgttgaag ctgcaggatg aaactgggct
     3961 tggcctctac gaaatgcgga tcctgatacc cttcgctgat atggacggcc ctgatccgcg
     4021 tcccgccaac ctggcgggcg atatcgtaca aatcggtcgt gctggtgacg acccgaagct
     4081 gcgcctccgc gggacgcccg gcaacgaggg cgctggctgc aaggagggcg agcgggatga
     4141 agcgtgacat tacgacctca gaatggatgc ggcttgtggg gtccgagcgc aaaagaagct
     4201 tgcagcagaa atcgcgtcgt gctgccggca tctttgagcg agcgacgctc cacggccgcc
     4261 aagagtttcg aaaattcgct ggggaaaaac tcatacagcg cggtaccagc cagcagccgg
     4321 gcaccgtccg cttcgggatc ctgcacccag tcgaaacggc ctccgaagta gccgcggcgg
     4381 gtcagctggt accgggcaaa aacgtatgcc ccagagaagt tgcgagtcgg cccgagataa
     4441 tccgccggca agacacccgc cggtaacacg ggccgatcag aattgagctg ccggaagaac
     4501 tcggtctgaa agagaaagga tttgtatagc ccctgttgca gcggccgcca ccggaaggtg
     4561 aagtccgctc cgacgaggga ttgccgcgcc aaggccgcgt tgacgtcgcc gacggctgtg
     4621 gcgagaggtt gctcccgccg accagtcatg gcgctggccg acaactcgat attggtggcc
     4681 tggctcaggt cccagtaatt gcgcagccgc gccgagtagc cgagacccga tagcttgtga
     4741 ttggacggct ctgcggtgac caggtcctcg ggagcttccc caaagcggtc caccgccgtc
     4801 aggatgattt cctgatagaa gcccaagggc gagaccactc gggccagata gaggccggtg
     4861 cctttgagtc cttcctcacc gaggaagcgc tgcagcacat agggatattc aaccgtgtga
     4921 agatcgtgcc ggtgggtcgt attctgcttc ccgatcggca tcaggtagcg acccaatctt
     4981 ccctcgagcc gtccaggcag cgcggtggcc gtcagaaagg cttgctcgat ggcgatccct
     5041 tccagatcgc tgatgccgag aaagatgtct ccccggaaat aaggatccac ggccgcttgc
     5101 agcgcgagct cgatctcccg cacgttgaac cggcccccat cctcctgagt cgagccctgt
     5161 ggtgaaaaat ctgcgaccag atcgccgacc gcactgatat cgggcaggag ccgaggattg
     5221 gtcgaaccgg tcggccgcac ctggccgggt agcgccggcc gcgtggtatc ctgtcgaccg
     5281 agggcttcga gttcccgaac cagtcgaatg gagtccgccc gggcccgcgc gatgctatcc
     5341 gcgcgggcgc gtgcccgagt gctatccggt atttgagccg cggccgtcgt ggccccgagc
     5401 agcccgacag tcaccgcgat aagcagtgct cgcatgttcc tcccttcggt tgaaccgaga
     5461 tcgcgaaaga gccggtatca gccgaggaga gggggtgccc gggagagtgg ttggcggtgc
     5521 ggagagtctg cccgcggggt tgtaacgaac tgttcggcgc accgaacctg gggcgccgcg
     5581 actactggcc caactgcacc gattcccgca gtaaagcgag catggtgtgc tgtcgagcga
     5641 atcgcgcagc cgtccgagtg gcagccggcc gtggcctcgt aatgggcgag cgaggcctcc
     5701 gctgcgcgat cccggccatg aaagaccagc ccatcgagaa ctggcaggcc tccaccgcca
     5761 cctccgatca gcaggatcag agtggttgaa aacaggtggg agagcgggca ccggcgcatg
     5821 ggtaggaatg tagtatcagc tattggctat tggctattgg cccgtacggc tgttgaccaa
     5881 tagcgaggag cccctagcca atagccctat tgcggctgcc gaatcggccc ttccatgggc
     5941 aggatgaacc agaaggtgct gccttccccg aagatggatt ccgctccgat ggctcccccg
     6001 tgcatctcca cgaactgctt gcacagggcc aggccgagcc cggtcccctg ctgctgccgg
     6061 ctggcggagc tgtcgacctg actgaacacc ttgaacagct tgtcgcgatc ctccgcacgg
     6121 accccgatcc cgctgtcccg caccgacacc cataccgctt cgcgggtaac caggcgtggc
     6181 gtctccccag accgctcgcc cgggatcggc aagggcactg gagtccgcac cgcggagaga
     6241 ctgatcgttc cctcttcggg ggtgaacttc gaggcgttgg agagcaggtt gaagaggatc
     6301 tggcgcaccc gcacgtgatc cgccacgact tcgagcggtt ccgggttttc ttcgacggtg
     6361 caggtctgtc gcttggccat gcgcaagctc cccgtgtcgg ccaccgcgcc gcgaatcgag
     6421 tcccgtagat ccagtcgggt caggtgcacc gtcatccggc ccgcctcgat cttggagaga
     6481 tcgagcacat tgttgatcag gcccagcagg tggcgtccat tgcggg
//
LOCUS       DASYRV010000355         1507 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_349419, whole genome shotgun sequence.
ACCESSION   DASYRV010000355 DASYRV010000000
VERSION     DASYRV010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349419"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..187
                     /locus_tag="VGQ24_09420"
     CDS             <1..187
                     /locus_tag="VGQ24_09420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455098.1"
                     /translation="NGSVCPHPMVANSASRAANLPDDEGFTKKRDVSSVCQTGESIVM
                     GTAGPERLAHFKEALPE"
     gene            296..1393
                     /locus_tag="VGQ24_09425"
     CDS             296..1393
                     /locus_tag="VGQ24_09425"
                     /inference="COORDINATES: protein motif:HMM:NF013345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-TA family PLP-dependent enzyme"
                     /protein_id="HEV8455099.1"
                     /translation="MDETPIPLVDLDRLERNLDRMAAYAAQHGLALRPHTKTHKSPRI
                     ATEQIRRGAVGLTCATLLETEVMAEASDDLLLAYPPVGSSKLQRLLSLPRETDVTVAL
                     DSPEVAEQLAQAARERGRPVGVLVEIDLGMRRVGLTTMDDMVALAGLVASRSPLVYRG
                     IAFYPGHIRDRVGNQTQELERLSAGVRAAVEALDRAGLAPGIVSGGSTPTVWKSHEIE
                     GVTEIRPGTYAYNDRITAQLGACGCDDCALTILATVVSTAVPGQAVIDAGSKALGREP
                     SEGEGEGYGALLDRPEVIVRRLSEEHGILDLRGSDWRPAVGDQVRVVPNHACIAVHLH
                     EVIYGIRGGRLETSWPVTARGRRPLRSSVGV"
BASE COUNT          277 a          460 c          510 g          260 t
ORIGIN      
        1 gaacggctcg gtgtgcccgc acccgatggt tgccaacagc gcgagcagag cggcaaacct
       61 gccggacgat gaaggcttca cgaagaagcg ggatgtgtca tcggtgtgtc aaaccggtga
      121 gagtattgtc atggggacgg cgggaccgga acggctcgca cacttcaagg aagctcttcc
      181 agaatagcta cttagagtcg ggagcacgat cttccaggct cccgccctat ataaaggaag
      241 gggccccagc tgcgcgcttg catccgcttg ggagtcaata gatcatggag gggtgatgga
      301 cgagacaccg atcccgctgg tggacctcga tcgtctcgag cgcaatctcg atcgaatggc
      361 ggcgtatgcc gcccaacatg gtcttgccct ccggcctcat accaagactc acaagtcacc
      421 ccggatagcg accgagcaga tccgccgcgg tgcggtcggc ctcacctgtg ctaccctgct
      481 cgagacggag gtcatggccg aggcatctga cgacctcctg ctcgcctatc cgccggtcgg
      541 cagctccaag ctccagcggc tgctatccct tccccgggaa accgatgtca ctgttgctct
      601 ggactcgccg gaggtagccg agcagcttgc ccaggcggcc cgagagcggg gaagaccggt
      661 cggagtcctg gtggaaatag acctggggat gcgccgggta ggcctcacaa ccatggacga
      721 catggtggcg ctggcgggac tggtggcctc acgatcgccc ttggtctatc gcggaatcgc
      781 gttttaccca ggccacatcc gtgatcgggt cggcaatcag acccaggagc tggagcgact
      841 gagtgccggg gtccgagccg cggttgaggc tctcgaccgg gcgggtctcg cgccaggtat
      901 cgtgagcggc ggatcgacgc cgacggtctg gaagagtcac gagatcgagg gcgttaccga
      961 gatccgtccc ggtacatacg cctacaacga ccggatcacc gctcaattgg gcgcctgcgg
     1021 ctgcgatgat tgcgcgctca ctatcctggc gacggttgta agcactgccg ttcccggtca
     1081 agcggtgatc gacgccggga gcaaggccct ggggagggag ccctccgaag gcgagggcga
     1141 aggatacggt gcgctgctgg accggccgga agtgatcgtg cgcaggctct cggaggagca
     1201 cggcattctg gacttgcggg gcagtgactg gcgccccgcc gtgggcgacc aggtgcgggt
     1261 ggtgccgaac cacgcttgca tcgccgttca tctgcacgag gtgatctacg ggatccgtgg
     1321 cggtcggcta gagaccagtt ggcccgtgac tgcccgaggt cggcggccac tgcgctcttc
     1381 tgtcggagtc tgagaatcgt cgtgccgccg ggctattcca agcgaaccct tgcccaaaag
     1441 ctcggcatca agccggggac gcgggtcgtc gcattggagg cacccccgac atatccatcg
     1501 ctgctgg
//
LOCUS       DASYRV010000356         6644 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1803769, whole genome shotgun sequence.
ACCESSION   DASYRV010000356 DASYRV010000000
VERSION     DASYRV010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6644
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1803769"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..3603
                     /locus_tag="VGQ24_09430"
     CDS             <1..3603
                     /locus_tag="VGQ24_09430"
                     /inference="COORDINATES: protein motif:HMM:NF020083.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455100.1"
                     /translation="LELGIDIGHVDLVAQLGTPRRIATFLQRVGRSGHTVHGTPKGRL
                     FPLTRDELVECTAIIRSVRSGELDRVILREKPLDVLAQQIVAETAAEDWDEAALYELF
                     RRAYAYRHLERAEFDQVVRMLAQGFSTQRGRRGALIHHDAVNGRIRGRRGSRLLAITS
                     GGAIPDNADFRVVLEPEKIFIGSVNEDFAVESLQGDIFQLGNMSWRILQVAQGVVRVE
                     DAHGQPPSIPFWLGESPARSDELSAAVSELREGVEERLGDRAEATDWVASLLDGTAVE
                     IVPHPEQSEGPSQLGDSPRVAAHQLVEYLAESKRMLGVLPTQNTIVAERFFDEAGGMQ
                     LVIHSPFGSRVNRAWGLALRKRFCRQFNFELQAAATEDALLLSLGPQHSFPLETVFRF
                     LHPEQVEDILVQALLDAPMFGTHWRWNANIALAVPRSRAGRKNPPQLQRMQADDLLAA
                     AFPDAAACLENIPGDREIPDHPLVRQTIDDCVHEVMDLDLLTAILRRVQAGEIQVVAR
                     DLPEPSPLAHEILNAKPYAFLDDAPAEERRTQAVYTRRAFEPSSADDLGALDPAAIER
                     VRDEAWPEIRDADELHDALLTSGFLTEVEGISGRDGVSWSGYFHELVETGRADRVELA
                     RGQTIWAAVERLPEVSGAGALRAGYPRSGWRQRGSGAETPSREDAIRELLRGRLGIIG
                     PTTAAQLAGSLNVSEGEADIALAALEGEGVVLRGRFTPSADGAAPLEWCDRRLLARIH
                     RYTLNRLRAEIEPVSAADFMRFLFAWQRLDPEHRVGGLEGLAAVIEQLDGFELPAAAW
                     ETDVLASRCEEYDPALLDTLCMMGRVAWGRLSGGTWERRNDGHGTSDTAQPPYRRTAG
                     PIRSTPIALFLREQANQWLADKNGEDYELSSYAAVVRDVLQQRGASFFHELVAMAGLL
                     PTQVEQALGELAGLGLVTSDSFAGLRALITPASKRKPLSGARRRHRTAPFGIESAGRW
                     ALLGGRAVGRKGGSSGDQIEEEGQGTAGHAELVAKTYLRRYGIVFKRLLSREAGAPAW
                     RDLLMVYRRLEARGEIRGGRFVSGMSGEQFALPEAVGQLRSVRRLEGGGRLVSVGGAD
                     PLNLTGILTPGERIPGLTSNRILYRDGVPVLAKEAGQVKSLAPDAAEPSAELVHALVR
                     KASTPALHRYLGMSGAPAASVPLNRPPKRGRGRRRAGTEEAGLATRVGQPAELG"
     gene            3843..4277
                     /locus_tag="VGQ24_09435"
     CDS             3843..4277
                     /locus_tag="VGQ24_09435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455101.1"
                     /translation="MRQLAFAALTLLLATTAACRSKQTANAGGEPDTAVTTAAPAPEP
                     AASTAPRDFSFDQRQQFTESVRQQLATADQQIKELAAQVKSKGGAVSDRALANIRATR
                     KTVDRNLKRVDAATATTWDQTKSAVNQSVDRLTESIEAAQPK"
     gene            4285..4671
                     /locus_tag="VGQ24_09440"
     CDS             4285..4671
                     /locus_tag="VGQ24_09440"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEV8455102.1"
                     /translation="MQLPWLLQFSDAALLFMRLLVGLVFITSGWSHAKDPVARAKSIG
                     MSPGFTRFLGIAELAGGLGVALGVLIQVAALGLIFLMLGAIQRKIFIWKTGFWGKATD
                     GWHYDLLFIVMCLVIATTGGGRYVLL"
     gene            4710..>6644
                     /locus_tag="VGQ24_09445"
     CDS             4710..>6644
                     /locus_tag="VGQ24_09445"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEV8455103.1"
                     /translation="MSDPTSRLQNALADRYRIEGELGRGGMATVYLAHNLRQERLVAL
                     KVIHPEVAAVLGPERFLREIKLTANLRHPHILPLFDSGEAAGQLWYTMPYVEGESLRQ
                     RLLREKRLPLDEALRIVSDVLAALAYAHEHGIVHRDIKPENILLEGGEAVLADFGIAH
                     AVSAAGSERLTRTGVAVGTLAYMSPEQAVGQKTIDGRSDLYSLGCVLYECITGEPPFT
                     GPNPQSIIAKHLTAPPPPVTSAEGAVPPSVVQALDKALAKTPSERFDNAAAFAAALGT
                     GKEASTPWGGRRRIALAALAALVLLGLTFYAGRIAPGRAQAGGTVASGFNRKLTQLTF
                     GEGVEEWPAWSPDGARLAYVAEVDGFRQLFLRTIAGGADRRLSRDSRDHIQPAWSSDG
                     QRLAFVQSRLSGGKLEPSDINGWYQENGEIWSVELANGDETKLIDNAFNPAYSPDGRR
                     IAFDAAWAGARRIWIADAGGRNPRQVTSDSSEAVVHTNPRWSPDGTRLAFRRVEKIKS
                     DIDVVDLSSQEVTRVTNDNVLDMDPVWAPDGRHIYFASSRGGGLNLWRIGVGSGGKPA
                     SPPEQLTTGAGDDVEPTVAPDGSRVAFAVRGINSDLWRLPVVPTPGQPRGAPEPVVMT
                     TRVESRGAWSPDGRSIAFNSD"
BASE COUNT         1090 a         2177 c         2306 g         1071 t
ORIGIN      
        1 ctcgagctcg gcatcgacat cggccacgtg gatctggtcg cccagctcgg cacaccccgc
       61 cggatcgcga ccttcctgca gcgggtgggc cgctccggcc acaccgtcca cggcacgccc
      121 aaaggccggc tcttccccct gacccgcgac gagctggtcg agtgcaccgc gatcattcgc
      181 tcggtccgaa gtggggagct ggatcgcgtc atcctgcggg agaagccgct cgatgtgctc
      241 gcgcagcaga tcgtggcgga gaccgcagcg gaggactggg acgaggcggc gctgtacgag
      301 ctctttcgcc gggcgtacgc gtaccgccat ctcgagcgtg cggagttcga ccaggttgtc
      361 cgcatgctgg cgcaggggtt ctctactcag cggggacgga ggggcgcgct gatccaccac
      421 gatgcggtga atggtcggat tcgcggccgc cggggctcgc gcctgctcgc gatcacctcc
      481 ggtggcgcga ttcccgacaa cgccgacttc cgggtggtgc tcgagccaga gaaaatcttc
      541 atcggctcgg tgaacgagga cttcgcggtg gagagccttc agggcgacat cttccagctc
      601 ggcaacatgt cctggcggat tctccaggtg gcacaaggtg tggtgcgggt ggaggacgca
      661 catggccaac cgccgagtat tccgttctgg ctgggggagt cgccagcgcg gagcgacgag
      721 ctgtcggccg cggtatcgga gttgagagaa ggggtcgagg agcgtctggg ggatcgggct
      781 gaggcgaccg attgggtggc atcgttgctc gatggcaccg cggttgaaat cgtacctcat
      841 cccgagcaaa gtgagggacc ttctcagctg ggtgattccc ctcgcgtcgc cgctcaccaa
      901 ctggtcgagt atctcgccga gtccaagcgc atgctcggag tgctgcccac ccagaacacc
      961 attgtggccg agcggttctt cgacgaggcg ggcgggatgc agctcgtcat ccactctccg
     1021 ttcggaagcc gggtgaaccg cgcctggggc ttggcgctcc ggaagcggtt ctgccgccaa
     1081 ttcaacttcg agctccaggc ggccgcgacc gaggacgcgc tcctcttgtc gctgggtccg
     1141 cagcattcgt tcccgctgga gaccgtcttc cgcttcctcc atcctgagca ggtggaagac
     1201 atcctggttc aggcgctgct cgacgcgccg atgttcggca ctcactggcg gtggaacgca
     1261 aacatcgccc tcgccgtccc gcggagccgg gccgggcgca agaacccgcc ccagctccag
     1321 cggatgcagg ccgacgatct cctcgcggcg gcgtttcccg atgcggcggc gtgtctggaa
     1381 aacatcccag gcgaccgaga gatccccgat catccgctgg tgcgccagac gatcgacgac
     1441 tgcgtgcatg aggtcatgga cctcgacctc ctcaccgcga tcctccgccg ggttcaggcg
     1501 ggagagattc aggtcgtagc tcgggacctg cccgagccgt cgccgctggc gcacgagatc
     1561 ctcaacgcga agccctacgc cttcctcgac gacgcgccgg cggaggagcg ccgcacccag
     1621 gcggtttaca ctcgtcgcgc cttcgagccc tcctccgccg atgatttggg cgcgctcgac
     1681 cccgccgcga tcgagcgggt ccgggacgag gcgtggccag agattcggga cgccgacgag
     1741 ctacatgatg cgctgctcac ctcgggcttt ctcaccgagg tcgaggggat atcgggtcgc
     1801 gacggcgtgt cctggagcgg ctacttccac gagctggtgg aaactggacg cgccgaccga
     1861 gtcgagctgg cgaggggcca gacaatctgg gccgcggtag agcggctgcc tgaagtcagt
     1921 ggggcgggtg ccctccgggc cgggtacccg cgaagcgggt ggcggcagcg gggcagcggg
     1981 gcagaaacgc ctagccgtga ggatgcgatc cgggagctgc tgcggggccg actcggcatc
     2041 atcggcccga ccacggcggc gcagctcgcc ggctcgctca acgtctccga gggcgaggcc
     2101 gacatcgcgt tggccgccct ggagggcgaa ggagtggtac tccggggccg gttcaccccg
     2161 tcagccgacg gtgccgctcc gctcgagtgg tgcgatcgcc ggcttctggc ccggattcat
     2221 cgctacacgc tgaatcgtct ccgggccgag atcgagccgg tgagcgcggc cgacttcatg
     2281 cggttcctgt tcgcctggca gcggctcgat ccggagcatc gggtcggtgg actcgagggt
     2341 ctggccgctg tgatcgagca gctcgacggc ttcgagctgc cggccgccgc gtgggagacg
     2401 gacgtgctcg cgtcccgctg cgaggagtac gatcccgcct tgctggacac gctctgcatg
     2461 atggggagag tagcatgggg acggttatcc ggaggaacgt gggaacggcg gaacgacggt
     2521 cacggtacat cggacactgc ccaaccgccg taccgccgta ccgccggccc gattcgctcg
     2581 actccgattg cgctgttcct cagggagcag gccaatcagt ggcttgccga caagaacggc
     2641 gaagactacg agctgtcgag ctacgccgcg gtggtgagag atgtcctcca acagcgaggg
     2701 gcctcgttct ttcatgaact ggtggcgatg gcgggccttc ttcccaccca ggtagagcaa
     2761 gcactgggtg aattggcagg gctgggcctg gtcacatccg acagctttgc cggtctgcgg
     2821 gctcttatta ccccggccag caaacggaag ccgctcagcg gcgcgcgtcg ccggcaccgg
     2881 acggcaccgt tcgggatcga aagtgcggga cgatgggcgc tgctaggcgg tagggcggta
     2941 gggcggaaag gcggtagttc gggagatcag atcgaggagg aagggcaagg taccgccggt
     3001 cacgcggagc tcgttgccaa gacatatctc cgccgctacg gcatcgtctt taagcgtctt
     3061 ctgtcccgcg aagccggcgc acccgcgtgg cgcgacctgc tgatggtcta tcgaaggctc
     3121 gaggcccggg gggagattcg gggcggccgg ttcgtgtccg gcatgtcggg cgagcagttt
     3181 gcgttaccgg aagccgttgg tcagctccgc tcggtccggc ggctcgaggg tggcgggcgc
     3241 ctcgtcagcg tcggcggggc cgatccgctc aatctcaccg gaattctcac gccgggggag
     3301 cggattccag gcctcacctc taaccgcatt ctctaccgtg acggcgtgcc ggtgctggcc
     3361 aaggaggcgg gccaggtgaa gtcgctcgct cccgatgcgg ctgagccctc agccgagctg
     3421 gttcatgcgc tagtgcgcaa ggcgagcacc ccagccttgc accggtatct gggaatgagc
     3481 ggagcgccgg cagcatcggt gccgctcaac cgcccgccga agcgaggccg gggccgccgt
     3541 cgcgccggca ccgaggaggc cgggttggct accagggtgg ggcagccagc ggaactgggc
     3601 tgagccccga aggctgagtg taaggagagg cagtgggggg aagtcagaca ctcgaagccg
     3661 gaggggctcg gtccagtgcc gctggctggg cggggtggta gagctccgcc ccccacctct
     3721 ccgcgcaaac ggcagcaggc ggttaccgag atatccagta gcgtgtcacc ttgacggccc
     3781 ctatgcccgg ggatagctct cgtcagagac ccgaatttcc aagccctgtc tgggaggtac
     3841 cgatgcgaca acttgccttt gccgctttaa cgctcttgct cgccaccacc gccgcctgcc
     3901 gaagcaagca gaccgcgaat gcgggtggcg agcctgatac cgcagtcacc acagcggccc
     3961 cggcgcctga gccggctgcg tccaccgctc cgcgtgactt ctccttcgat cagcgccagc
     4021 aattcaccga gtcggttcgc cagcagctgg ctaccgcgga ccagcagatc aaggagctgg
     4081 ccgctcaggt caagtcgaag ggcggagccg tgagcgaccg ggcgctggcc aacatacggg
     4141 ccactcgcaa gaccgtggac cggaatctca agcgagtgga cgcggcgacc gcgaccacct
     4201 gggatcagac gaagagtgcg gtcaaccagt cggtggatcg cctgaccgag tcgatcgagg
     4261 ccgcccagcc caagtgacca tccgatgcag ctcccctggc tgctccaatt cagcgacgcc
     4321 gcgctcctct tcatgcggct cctcgtcggt ctggtgttca tcaccagcgg atggagtcac
     4381 gccaaggacc cggtcgctcg agcgaagagc atcgggatga gccctggctt cacccgcttc
     4441 ctcggcattg ccgagctcgc cggtgggctg ggagtggcgc tgggagtgct gatccaggtt
     4501 gccgccttgg ggctcatctt cctcatgctg ggcgcgatcc agaggaagat cttcatctgg
     4561 aagaccggct tctggggcaa ggcgaccgac ggctggcact acgacctgct gttcatcgtc
     4621 atgtgcctgg tgatcgcgac gaccggcggc gggaggtacg tgctcttgta accctacccc
     4681 ggaccgcacg gcacatgtag cctagagaag tgagcgatcc cacctcccgc ctgcaaaacg
     4741 ccttggccga ccgttaccgc atcgagggcg agctcggacg cggggggatg gccacggtct
     4801 acttggcgca caacctccgc caggagcgcc tggtcgcact gaaggtgatc catcccgagg
     4861 tggccgccgt cctgggtccc gagcgtttcc tccgcgagat caagctcacc gccaacctcc
     4921 gccacccgca tatcctgccg ctcttcgact ccggcgaggc ggccggccag ctctggtaca
     4981 ccatgcccta tgtcgaggga gagtcgctgc ggcagcggct gcttcgggag aaacgactcc
     5041 ccctggacga ggccctccgg atcgtcagcg acgtgctcgc cgccctggcc tacgcccacg
     5101 agcacggcat cgtgcaccgg gatatcaagc cggagaacat cctgctggaa ggcggcgagg
     5161 cggtcctggc ggacttcggt atcgcccacg cggtgagtgc cgccggaagt gaacgactga
     5221 cccggaccgg ggtggcggtg ggcaccctgg cctatatgag tccggaacag gccgtcggtc
     5281 agaagacgat cgacggccgc agcgatctct actcgctcgg ctgcgtcctg tacgagtgca
     5341 tcaccggcga gccgcctttc accggtccca atccccaatc gatcatcgcc aagcatctga
     5401 cggccccacc accaccggtc acgtcagctg agggggcggt gccgccgtcg gtggtccaag
     5461 cgctggacaa ggcgctcgcc aagacgccga gcgaacggtt cgacaatgcg gccgcgttcg
     5521 ccgcggcgct cggcaccggt aaggaggcca gcactccctg gggcgggcga cgtcgaattg
     5581 ctctcgcagc cctggctgcg ctggtgctgc tggggctcac cttctacgcc ggccggatcg
     5641 cgccgggacg agcccaggcc ggcggcacgg tcgcctcggg attcaaccgc aagctgaccc
     5701 agctcacctt cggcgaggga gtggaggaat ggccggcctg gtcgcccgat ggggctcggc
     5761 tcgcgtacgt ggcggaagtc gatggattcc gccaactctt tcttcggacc atcgcaggcg
     5821 gcgccgaccg gcgcctttcc cgcgactcga gagaccacat ccagccggct tggtcttccg
     5881 acggacagcg cctggccttc gtgcagtcga ggttgagtgg cgggaagctg gagccgagcg
     5941 acatcaacgg ctggtaccag gagaacggcg agatctggag cgtcgagctc gcgaacgggg
     6001 atgagacaaa gctgatcgac aacgccttta atcccgcata ctcaccggac gggcgccgaa
     6061 tcgcgttcga tgcggcatgg gccggagcgc ggcggatttg gatcgccgat gccggcgggc
     6121 gtaacccgcg gcaggtgacg tccgactcga gcgaagccgt ggtgcacacc aatccccgct
     6181 ggtctcccga cggcaccagg ttggccttcc gccgggtgga gaagatcaaa tccgacatcg
     6241 acgtcgtgga cctgtcctcg caggaggtga cccgggtaac caatgacaac gtgctggaca
     6301 tggatccggt gtgggcgccg gacggacggc acatctactt cgcctcctcc cggggcggcg
     6361 gactgaacct ctggcggatc ggagtcggga gcggcgggaa gccggccagc ccgccggaac
     6421 aactcaccac cggcgcgggg gacgatgtcg agcccaccgt ggcgcccgac gggagccggg
     6481 tggctttcgc ggtccgcggc atcaactccg atctctggcg gctgccggtt gtccccacgc
     6541 cggggcagcc gcgcggtgcg ccggagccag tggtgatgac gacgcgggtc gagagccggg
     6601 gggcctggtc gcccgatggc cgcagcatcg cgttcaattc cgac
//
LOCUS       DASYRV010000357         7577 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3666831, whole genome shotgun sequence.
ACCESSION   DASYRV010000357 DASYRV010000000
VERSION     DASYRV010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7577
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3666831"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..627)
                     /locus_tag="VGQ24_09450"
     CDS             complement(<1..627)
                     /locus_tag="VGQ24_09450"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8455104.1"
                     /translation="MSHKPSVLVVDDESGILDTLRILLRNEGFEVATAQGGKAGLEQI
                     RTGTHDLILSDVRMPQVSGLDILNAAREQDPMTPVILMTAQASLQSAISAVNSGAFYY
                     IQKPFSNDELVAILRRACEYRAVKVENTQLKQEIRRRDKTTSTTRPIGKSKRFLDVLK
                     LAEHVAPTDSTVLIQGESGTGKEVIARYLHNLSGRADGPFLSINCGALP"
     gene            complement(624..2285)
                     /locus_tag="VGQ24_09455"
     CDS             complement(624..2285)
                     /locus_tag="VGQ24_09455"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEV8455105.1"
                     /translation="MVPDRRRPGKNTLPDQRTLLTWLFVGRLVLATGVLLGAGLVWTE
                     RPQESFIVSVAVVFALVFTGYGVGTVFLLRRTPTNAFFLIQAFVDLGLVTTIVHFAGQ
                     PQSAFPALYVLVVAAYALLMPPVWVAITAFLASILFIGDTLWTHSTSLNSAAWAQIVV
                     FNLVFGIVAVLGHRLREAGMEQATLATELQRVRLEADDILRNIRSGVLTVDGFGRLAF
                     INPTAERLLDLDGEALIGHPVLDDLKTRSSELWAAAVAGIRNGRKISRGEGMVVQGAG
                     RIFPIGLSTTTFRQEAQDAPSVTAIFTDISDLKEVQELHMRAERLEAVAELSASLAHE
                     IRNPLASIRSSVEQLARSKHADDDERFLAGLIVRESDRLSRLLSEFLDFARVRATHFV
                     PLDLHSLVVAVVRLIRAHPDCRPDAAITVEGGHTLLEGDEDLLHRVVANLVLNAVQAA
                     RGPIRIAVSVAPAQSTEIPHGTNLEHAVRLQVRDNGPGIPEEVRERLFQPFVSGRSGG
                     SGLGLAIVQRAVEAHRGLVLVESAAGSGTTFTIFLPAKMVAEDAA"
     gene            2455..2748
                     /locus_tag="VGQ24_09460"
     CDS             2455..2748
                     /locus_tag="VGQ24_09460"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEV8455106.1"
                     /translation="MPWIVYLARCRDGTLYTGITTDPERRLAEHNAGSGAAYTRTRLP
                     VVFVYWEAVSDRSSALRREHAIKRLSRAGKEALVATAPCRYIGRARTRRSTPG"
     gene            complement(2706..3287)
                     /locus_tag="VGQ24_09465"
     CDS             complement(2706..3287)
                     /locus_tag="VGQ24_09465"
                     /inference="COORDINATES: protein motif:HMM:NF021505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2231 domain-containing protein"
                     /protein_id="HEV8455107.1"
                     /translation="MKFAGHPVHPMLIVFPLGLLATAVIFDIVYLVSGNSQWTLVAYY
                     MVGAGVIGGLAAAVFGWLDWFAIPTGSRAKRIGLLHGVGNVIVLVLFILSWVLRRDNP
                     EVPPTGAIVAGLVGFVLAAFTGWLGGELVGRLGVGVDEGAHLDSPSSLSELPAGVGVG
                     SSYRSRTYTGAERRASAPAPYPGVDRRVRARPM"
     gene            complement(3390..5966)
                     /locus_tag="VGQ24_09470"
     CDS             complement(3390..5966)
                     /locus_tag="VGQ24_09470"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEV8455108.1"
                     /translation="MLDATQPLDLLDRVGEGIFALDPDWRFAYINRQAERMLSRLSGC
                     PSTDLLGSVIWDRPALADSSLGRALHRAYVEQTAVVHEVPGAGNRGSLEVRVYPSDQG
                     LTVLLRENALAGHTSQILDGMDEAFIGCDHEWRVTHLNARAQAYLAPYGLGRAGLLGQ
                     NIWYALPGLTGTRFQAEAFRAHAQGTEVELEEFVPAAGRWISIRMAPTSNGLVAYARL
                     VPDHTQAEHALHASEERYRHLVESIDDVVFRLDREQRCMDAFGRWLEREGIEPASLIG
                     RTVREIVGPEDAPQHEEANLRALAGETITYEWTLKTPRGHRHMQTTLSPLHGPGGDVV
                     GIVGVGRDVTHRIEAGLELQRWARIFEHAGWGVAIVTADGLIESLNPAFAAMHGWTVD
                     DLRGTPMIDLAAPGRHEFPRMNPAFDERGHQIWETERIRRNGMVFPALIDATAVKNAE
                     GQVIYYAVNVQDLTERRRAEEQVRQAQKMEAVGRLAGGVAHDFNNMMMIIMGFSDFLL
                     TTLDRGDPRWADAEEIRKAAERAMNLTRQLLGFGRQQLVARHVLSLNDIISGMERMLR
                     PLLGEDIRLATQLSVGLGGIEADYGQLEQVVMNLALNARDAMRGGGRLTIETLDVDLP
                     EGYAYRQIGIDIPAGPYVMLIVSDTGHGMTPEVKARLFEPFFTTKPATQNTGLGLATV
                     YGIVAQSGGYIWVDSEPGRGTAFKICFPRVESEDDTVPPARRSADPPGGSETILLVED
                     EETVRTVAGRVLTTRGYVVHKAANGEEALALARKLDGTVDLVLTDVVMPDMGGVELVE
                     RLLELWPRLRVVYMSGYADGDKLGPGSQGVDHSFLQKPFSTESLTLKVREVLDAVPGH
                     PA"
     gene            complement(6036..>7577)
                     /locus_tag="VGQ24_09475"
     CDS             complement(6036..>7577)
                     /locus_tag="VGQ24_09475"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEV8455109.1"
                     /translation="SGAARDAIALLDSTFAPLTRAEELVVARAATQSGLMFRAVTGFA
                     RLPSLASEDRFDYATALTRLGRNREAAVQFARVRAPRARAALAAYQSARSLVRDGQIR
                     EGRLALVRVSRTFPRDTAAAASAFFLRADLASDERADEEARRLYRLVATRYPTSRFAP
                     TSRFRAAMIGLLSGQPKMAGEEFDALAERYPRSDEAIGATYWAGRAWAEAGDSVLARA
                     RWQSVTSRDPLSYYAALAAVRLGARPWTPAVGLDTFLPDPEIDGIVARAALLRRLGLV
                     AESRWELDRLARAADSSPERLLVLANAFRSQGRASQAIQLARRALARGAPADARTFRL
                     IYPLIHEDALLAEAAEQRLDPSFVAAVIRQESSFNPAATSPAGARGLAQVMPELGERL
                     ARELNYPVWDPVLLYQPDVSIQLGAFHLRELLGLYDQRAHILAAYNAGRSRVELWSKR
                     IGVADPEVFAERISFVETRDYVRIIQRNEEIYRALYGPEVVQRAEALPPAPPSADAGA
                     DQQQM"
BASE COUNT         1372 a         2505 c         2480 g         1220 t
ORIGIN      
        1 cggcagcgcc ccgcagttga tcgagaggaa cggcccgtcg gcccgtcccg acaggttgtg
       61 gaggtagcgg gcgatcacct ccttgcccgt cccgctctcc ccctggatca gcaccgtcga
      121 atcggtcggg gcgacgtgct cggccagctt gaggacatcg aggaaccgct tggacttgcc
      181 gatcgggcgg gtggtcgagg tcgtcttgtc gcgccgacgg atctcctgct tgagctgggt
      241 gttctccacc ttgaccgcgc ggtactcgca ggcgcggcgg aggatggcaa ccagctcgtc
      301 gttggagaac ggcttctgga tgtagtaaaa ggcgccggag ttcaccgcgc tgatggcgct
      361 ctgcagcgac gcctgggccg tcatcaggat cacgggtgtc atcgggtcct gttcccgggc
      421 ggcattgaga atgtcgaggc ccgagacctg gggcatccgc acgtcggaga ggatgaggtc
      481 gtgagttccc gtccggatct gttccagtcc cgccttcccg ccctgggcgg tggccacctc
      541 gaatccctcg ttgcggagca ggatccggag agtgtccaga atccccgatt catcatcgac
      601 aaccagcacc gacggcttat gactcatgca gcgtcctccg ctaccatctt ggcaggcagg
      661 aaaatggtga aggtggtgcc ggatccggcg gccgattcga ccagcaccag tccacgatgc
      721 gcctcgacgg cgcgctgaac gatcgccagg ccgagcccgc tgccaccgga tcggccggac
      781 acgaacggct ggaacagccg ctcgcgtact tcctccggga tccccggtcc gttgtcccgc
      841 acctgaaggc ggaccgcgtg ctccaggtta gtgccgtggg ggatctccgt ggactgagcg
      901 ggcgccacac tgaccgcgat gcgaatggga ccacgcgcgg cctgcaccgc attgagaacc
      961 aggttggcaa ccacgcggtg aaggaggtct tcgtcaccct ccaggagggt gtggccccct
     1021 tctactgtaa tggcggcgtc gggccggcaa tcggggtggg cccggatcag gcgtaccacc
     1081 gcgaccacca acgagtgcag gtcgaggggc acgaaatgag tcgctcgcac ccgggcgaag
     1141 tccaggaact cgctgagtag cctgctcaag cggtcgcttt cccgcacgat caatccggcc
     1201 aggaaccgct cgtcgtcgtc tgcgtgtttg gaacgggcca gctgctccac cgagcttcgg
     1261 atggaggcga gcggattgcg tatctcgtga gccagggagg cgctcagctc ggctaccgcc
     1321 tccagccgct cggcgcgcat gtgcagctcc tgcacttcct taaggtccga gatatcggtg
     1381 aagatggccg taaccgaggg ggcgtcctgt gcctcctgcc gaaaggttgt ggtgctcagc
     1441 ccgataggga aaatccggcc ggcgccctgg accaccatgc cttcaccgcg gctgatcttc
     1501 cgcccgttcc ggattcccgc taccgctgcg gcccagagct cggacgaccg ggtcttcaaa
     1561 tcgtccagca ccggatgccc gatcaaggcc tcgccgtcga gatcgagcag ccgctcggcg
     1621 gtgggattga tgaaagccag gcgcccgaag ccgtcgaccg tgagcacgcc cgagcggatg
     1681 ttgcggagga tatcatcggc ttccagccgg actcgctgga gctcggtcgc cagggtggcc
     1741 tgttccattc cagcttcacg caggcgatgc cccagcaccg ccacgatccc gaataccagg
     1801 ttgaagacca cgatctgggc ccacgcggcg ctgttcagtg aggtggagtg ggtccagagc
     1861 gtgtccccga taaagagtat cgaggccagg aatgccgtga tcgcaaccca taccgggggc
     1921 atgagcaacg cataggccgc caccaccagg acatacaatg ccggaaaggc ggactgcggc
     1981 tggccggcga agtgcacgat cgtggtaacc agacccaggt cgacgaatgc ctggatcagg
     2041 aagaaggcat tggtcggggt acgccgcaac aggaagacgg taccgacgcc atagccggta
     2101 aagaccaggg cgaagaccac tgccacgctg acaatgaagg attcctgcgg ccgctcggtc
     2161 cagacgagac cagccccgag caggacaccc gtggcgagca ccagacggcc gacgaatagc
     2221 caggtgagca gcgtacgctg gtccgggagt gtgtttttgc cgggccggcg ccggtcaggc
     2281 accattggga ctgctgcccg tccggacgga gcgtgagatt ccatcgaacc tcgggtcgga
     2341 gtactgtggg gggccagccg aagatagaga gggcgaccgc gcgggcggta gggggcgcac
     2401 cgccctttga cgtcactcag ggcaggctat gcgcccctac ccctatcttc ctgaatgccc
     2461 tggatagttt atctcgcccg ctgccgggac ggcaccctgt ataccggaat cacgaccgat
     2521 ccggagcgtc gcctggcgga gcacaatgcc ggcagcgggg cggcctacac ccgcaccagg
     2581 ctgccggtcg ttttcgttta ttgggaggca gtttcggacc ggtcgtccgc gctacggcgc
     2641 gagcacgcga tcaagcgact cagccgggcc ggaaaggaag ctctcgtcgc cacggcccct
     2701 tgccgctaca tcggacgggc acggacccgg cgatccactc cagggtaagg ggcgggtgcc
     2761 gaagcacgcc gctcggcgcc ggtatacgtc cgggatcgat agctggagcc aacccccacg
     2821 cccgccggca gctccgaaag ggagctgggg gagtcgagat gcgcgccttc gtctacgccg
     2881 acacccaggc ggcccaccag ctcgcctccc agccatcctg taaacgccgc cagcacaaag
     2941 cccactagac ctgccacgat agcgccggta ggtggcacct cgggattgtc ccgccggagc
     3001 acccagctca ggatgaagag caccaggacg atcacgtttc ccacgccgtg caagagcccg
     3061 atccgcttgg cccgactccc ggtgggaata gcgaaccagt ccagccaccc gaagacggct
     3121 gcagccaaac cgccgatgac gccggcgccg accatgtaat acgcaaccag cgtccactgg
     3181 ctgttgcccg agaccagata gacgatgtcg aagatcaccg ccgtggccag caacccgagc
     3241 ggaaaaacaa tgagcatcgg atgaaccggg tggccggcga atttcacttt gctttccatg
     3301 gtaacctcga gatcctcggc gaaggcagct ctatgtcatg gggaaaagat gagagaccca
     3361 gccaaaacgg ggatgtgacg catgaccgct catgccggat gtcccgggac tgcatcgagt
     3421 acttcgcgga ctttgagcgt caagctctcg gttgagaagg gcttctgcaa aaaggagtga
     3481 tccaccccct gagacccggg ccccagcttg tctccgtccg cgtatccgga catgtacact
     3541 accctgagtc ttggccacag ctccagcagg cgctcgacca gctcgactcc acccatgtcc
     3601 ggcatcacga cgtcggtcag caccagatcc accgtgccgt ccagcttccg ggccaacgcc
     3661 agcgcctcct cgccgttggc ggccttgtgt accacgtagc cgcgagtcgt caggacgcgg
     3721 ccggccacag tccgaacggt ctcctcatcc tcgaccagca ggatggtctc ggagcccccc
     3781 ggtgggtcgg ctgatcgacg ggcgggcggg acggtgtcgt cctccgactc tacccggggg
     3841 aagcagatct tgaaggcggt acccctgccg ggctcgctgt ctacccagat gtacccgcca
     3901 ctctgggcca cgatgccata gaccgttgcg agtccaagcc cggtgttctg ggtggctggt
     3961 tttgtggtga agaacggctc gaacaaccgg gcctttactt ccggggtcat gccgtggccg
     4021 gtatcgctca cgatcagcat gacgtagggt cccgcgggga tgtcgatccc gatctgccgg
     4081 tacgcgtacc cctcgggtag atcgacgtcc agcgtctcga tggtcaggcg gccgccgccg
     4141 cgcatcgcat cgcgggcgtt cagggcgagg ttcatcacca cctgctccag ctggccatag
     4201 tccgcctcga tgcccccgag gcccaccgac agctgagtgg ccagccggat gtcctcgccc
     4261 aggagcggcc tgagcatgcg ctccatgccg gagatgatgt cgttcagact gagcacgtgc
     4321 cgggcaacca gctgctgccg tccgaaaccc aggagttgcc gggtcaggtt catggcgcgc
     4381 tcggccgcct tgcgaatctc ctcggcatcg gcccaccgag gatcgccccg gtccagcgtg
     4441 gtcagcagga aatcgctgaa ccccatgatg atcatcatca tgttgttgaa atcgtgggcc
     4501 accccgcccg ccagccgtcc gaccgcctcc atcttctggg cctgccgaac ctgctcctcg
     4561 gcccgcctcc gctcggtgag gtcctgcaca ttgaccgcgt agtagatcac ctgcccctct
     4621 gcgttcttga ccgcggtcgc atcgatcagc gcggggaaaa ccatgccgtt gcggcggatt
     4681 cgctccgtct cccagatctg gtggccccgc tcatcgaacg ccgggttcat ccggggaaac
     4741 tcatgacggc cgggggccgc gagatcgatc atcggggtgc ctcgaagatc gtccaccgtc
     4801 cagccgtgca tggccgcgaa cgccggattc aggctttcga tgaggccatc tgcggtgacg
     4861 atggccacgc cccacccggc gtgctcgaag atccgggccc agcgttgcaa ctccagccct
     4921 gcctcaatcc gatgggtcac atcgcgcccg accccgacaa tgccgacaac atcaccgcct
     4981 ggtccatgaa gcggggatag agtcgtctgc atgtgacgat ggccgcgggg agtcttcagg
     5041 gtccattcgt aggtgatcgt ctcacccgcc agtgctctga ggttagcctc ctcgtgctgg
     5101 ggagcgtcct ccggaccaac gatttcgcgg acggttcgtc cgatcaggct tgccggctcg
     5161 atgccttccc gctcgagcca gcgaccaaag gcatccatgc accgctgctc ccggtcgagg
     5221 cgaaagacga cgtcatcgat cgactccacc agatgacggt accgctcctc gctggcatga
     5281 agcgcgtgct cggcctgggt gtgatccggg acgagtctgg cgtaggccac caggccgttg
     5341 ctggtgggag ccatacggat ggagatccag cggccggcgg cagggacgaa ctcctcgagc
     5401 tccacttccg ttccctgcgc gtgggcgcga aacgcctcgg cctgaaaacg ggtgccggtg
     5461 agtccaggaa gcgcatacca gatgttctgg cccaggagtc ccgcacggcc gaggccgtac
     5521 ggtgccagat aggcctgcgc tcgggcattg agatgggtga ctcgccactc atggtcgcac
     5581 ccgatgaagg cttcgtccat cccgtcgagt atctgcgagg tgtggcccgc taaggcgttc
     5641 tcccgcagca gcacggtgag cccctggtcc gacggataca cccggacttc gagtgaaccc
     5701 cggttgcccg cgccgggcac ttcgtgcacc acggcagtct gctcgacata tgcgcggtgg
     5761 agcgccctac ccagggagga atcggccagc gcaggacggt cccagatgac gctaccaagg
     5821 agatcagtgg agggacagcc ggaaagacgg gagagcattc gctcggcctg gcgattgatg
     5881 taggcaaatc gccaatcggg gtcgagggcg aagatgcctt cgccaacccg gtcgagtaga
     5941 tcgagcggtt gagtggcgtc gagcaaccga atgaaccttt ggctggagag gggaggccgt
     6001 ttcaaactaa gagcaagcga cctctcctgc caggctcaca tctgctgttg gtcggccccg
     6061 gcgtccgccg acgggggggc cggaggaaga gcctccgcgc gctgtaccac ctccggcccg
     6121 tagagggcac ggtagatctc ttcgttgcgc tgaatgatgc gaacgtaatc ccgggtctcc
     6181 acgaaggaga tccgttcggc gaagacttcg ggatcggcga ctccgatccg cttggaccac
     6241 agctctacgc gggacctccc ggcattgtac gccgccagga tgtgagcccg ctggtcgtag
     6301 agtccgagca actcgcgcag gtggaacgcg ccgagctgga tactcacatc gggctggtac
     6361 aggagcaccg ggtcccagac cgggtagttg agctcgcggg caagccgctc tcccagctcg
     6421 ggcatcacct gcgccagacc acgagcaccg gccggggagg tggccgccgg attaaagctg
     6481 gactcctggc ggatgaccgc ggcaacaaag ctcgggtcga gccgctgctc agcagcctcg
     6541 gccagcaacg catcttcatg gatcagcggg tagatcagcc ggaaggtgcg ggcatcggcc
     6601 ggcgcgcctc gggcgagcgc ccgacgggcg agctggatgg cctgagatgc cctgccctga
     6661 ctccggaatg cgttggccag cacgaggaga cgctccggcg agctatcggc ggcgcgagcc
     6721 aagcggtcca gctcccagcg agactcggcg acaagcccca gacgcctgag cagcgccgca
     6781 cgggcgacga taccatcgat ctccgggtcg ggcaggaagg tgtccaggcc taccgcaggg
     6841 gtccacggac gagctcccag gcgcacagcg gccagggcgg catagtagga gagcggatcg
     6901 cgggacgtaa cgctctgcca gcgagcacgg gcaagaacgc tgtcgccggc ttcggcccat
     6961 gcgcggccgg cccagtacgt cgcgccgatg gcttcatcac tccgcgggta acgctccgcc
     7021 agtgcatcga actcctcgcc agccatcttc ggctgtccgc tcagcagccc gatcatcgcg
     7081 gcccgaaacc gcgaggtggg cgcgaaccgg ctggtggggt aacgggtggc gaccaggcga
     7141 tacagccggc gtgcctcttc atcggcccgt tcgtccgagg ccagatcggc gcggagaaaa
     7201 aaggcggagg ccgccgccgc cgtatcacgg ggaaacgtgc gcgagacccg caccagcgcc
     7261 agtcggcctt ccctgatctg gccatcgcgg accagggagc gcgccgactg gtaggcggcc
     7321 agggccgccc gcgcccgggg ggcacggacc cgagcgaact gaaccgccgc ctcacgattc
     7381 ctgcccagac gagtgagtgc ggtggcgtag tcgaaccgat cctcggaagc caggctcggc
     7441 agtcgggcga acccggtgac tgccctgaac atcaggccgg attgcgtggc ggccctggcc
     7501 accaccagtt cttcggcccg ggtgagtggt gcaaaggtgc tgtcgagcaa tgctatggca
     7561 tcccgagcgg cgccgct
//
LOCUS       DASYRV010000358         3297 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3189900, whole genome shotgun sequence.
ACCESSION   DASYRV010000358 DASYRV010000000
VERSION     DASYRV010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3297
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3189900"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1243
                     /locus_tag="VGQ24_09480"
     CDS             <1..1243
                     /locus_tag="VGQ24_09480"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEV8455110.1"
                     /translation="CLSVLLFLSWAALSPLHAQGHEEEYDDPDPWTGFEDTGSGPDSA
                     TVARFLAALAASDPVVCQLAVRSVGNNWHWEGDGSGTLDADELAVHEALSHRVTDPRA
                     LARLSESLGEQKPCLRRAAARMLGNSEQAEAVSLLRAALRSSDPRTREAGALGLADAE
                     DPAAFHDLTRVLEDPEPSVARMAAHALGELEDARAVKPLGRLLRAKEPQTRAAAARAL
                     GDIEDIRAVEALTALVRDPDSLVRVAAIESLGDIEDYRAGRSLTEALSDRDLAVRRAA
                     AGALGDVEYRDAAGALARAIDDRDPVVRRLAAEALGEQDGVKRAPPRLVAALRDSDPI
                     LATISAKALAEIGDTTTVPALAAAYASLDPRLRFAVVQALADMDDRRVNGTLILARKD
                     RDRIVRHTAAEALKDREDDED"
     gene            1337..2050
                     /locus_tag="VGQ24_09485"
     CDS             1337..2050
                     /locus_tag="VGQ24_09485"
                     /inference="COORDINATES: protein motif:HMM:NF018095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEV8455111.1"
                     /translation="MPVRISNLILAAAVPLSACAPQKPETAAQPARRRPPPSATARAE
                     LDRRIARLELSLMDKEAQVDDLQARLDAARQEVVRAMAKLQTLASRAEAASGIAEAEL
                     ALQPLKAAAAQSSPEAAQARRLLAESSDEFGKENYGGALYLANQAKTMAAAGRGRLAG
                     GERMPERPGETAFGLPIPLKAVTGGNVREGPGIGARVMFSVQPGDSLTGYSYVDEWIR
                     ISDGEGRGGWIFRNLVERR"
     gene            complement(2051..>3297)
                     /locus_tag="VGQ24_09490"
     CDS             complement(2051..>3297)
                     /locus_tag="VGQ24_09490"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEV8455112.1"
                     /translation="GDWARELSTGDALIGDATWDESLGKGILLVAVPVQRADGRMAGA
                     LVARLNLRGAEDGLRAFAPSTSGQMYLMTREGSLIAGSQSGSSQLMRSKLKQQVLDKL
                     KAREGTVVSYESLAGTDVVGSLKRVPRVRWAILAEIPADTAYWQVLRFRNMTLLIVGG
                     LLLAVSAVAYRLGILIVRPLERLTKGAAEVANGDLAVDLPAAKGEVGDLTLVFNHMVE
                     RLRHGRQELDAVNEKLRGQNEELERLSTVDALTGLHNRRFLTQRLSDELLRSYREKCS
                     FTVLMADVDEFKKYNDAFGHPAGDEVLRKVASILLASTRAVDCTARYGGEEFAVLLAD
                     TVGDGALQVAERIRARVAAEEFPGRKITISIGMAEFPVHGHSAEAVISRADEALYAAK
                     RAGRNRIERAGPGRTRVKEQKI"
BASE COUNT          541 a         1142 c         1101 g          513 t
ORIGIN      
        1 ctgtctctca gttctgctct tcctgtcctg ggcggcgcta agcccactcc acgcccaggg
       61 acatgaggag gaatacgatg atcccgaccc ctggaccggc ttcgaggaca ccggcagtgg
      121 gcccgactcg gccacggtag cgcggttcct cgctgcactt gctgccagcg atccggtcgt
      181 ctgccaactc gccgtccgct cagtgggcaa caactggcac tgggaaggcg acgggagtgg
      241 gacactggac gcggacgagc tggccgtgca cgaggccctg agtcatcggg tgaccgaccc
      301 tcgcgcgctg gctcggctct ccgagtcact cggagagcag aagccctgcc tccgccgtgc
      361 ggccgcacgc atgctcggca acagcgaaca ggcggaagcc gtgagcctgc tccgggctgc
      421 gctccggagc tccgacccgc gtactcgtga ggccggcgcc ttgggtctcg cagacgcgga
      481 ggatccggcg gcctttcacg atctgacccg cgtgctggag gaccctgaac cctccgtggc
      541 tcggatggcg gcgcatgcgc tcggtgagct ggaggacgct cgtgccgtga agccgctggg
      601 ccggttgctc cgggcgaaag aaccacaaac ccgggcggcc gccgcccgcg cgctgggaga
      661 catcgaggat atcagagcgg tcgaggccct cacggcgctg gtccgcgacc ccgattcgct
      721 ggtacgcgtc gcggcgatcg agtcgctcgg cgacatcgaa gattaccggg ccggccgctc
      781 gctcaccgag gcgctgagcg acagggatct cgcggtccgg cgtgccgctg ccggggcgct
      841 cggcgacgtc gaataccggg atgcggccgg cgcgctggcg cgcgccatcg acgatcgtga
      901 cccggtcgtc cggcggttgg ctgccgaagc attgggtgag caggacggcg tgaagcgcgc
      961 tccgccccgg ctggtcgccg cgctgaggga ttcggacccc attctcgcca cgataagcgc
     1021 caaggcgctg gccgagatag gcgacaccac gacggtcccg gcgctcgccg ccgcatatgc
     1081 cagcctcgac ccccgcctcc gattcgcggt ggtccaagcc ctcgccgaca tggacgaccg
     1141 ccgggtgaat ggcacgctca tactcgccag aaaggatcga gatcgcatcg tccgccacac
     1201 agcggcggag gcgctgaagg accgggaaga cgacgaagac tgaggacagg gctggcggta
     1261 tgcctggggg gtaggtataa ctttccgctc gctctacccc tgccaacccc cactgcgtcc
     1321 gacaggagtc tgcgatgtgc ccgtgcgcat aagcaacctg atcctcgccg cagcagttcc
     1381 tctctcagcc tgcgctcccc agaagcccga gacggcagct cagccagccc gtcgccgtcc
     1441 gcccccgtcc gcaacagcac gcgcggagct ggaccggcgg atcgcccggc tcgagctgtc
     1501 gttgatggac aaggaagcac aggtagatga tctccaggcc cgtctggatg cggcgagaca
     1561 ggaggtcgtg cgggccatgg ccaaactcca gacgctggcc agccgcgccg aggcggcttc
     1621 cggcatcgca gaagcggagc tcgccctcca gccattgaag gcggccgctg cgcagtcctc
     1681 ccccgaggcc gcacaggcca ggcggctgct ggcagagagc tcggacgagt tcggcaagga
     1741 gaactacggt ggcgcactct acctggcgaa ccaagccaag accatggccg cagccgggcg
     1801 cggacgactg gcgggcggtg aacggatgcc cgagcggccc ggtgagacag cattcggatt
     1861 gcctatcccg ctcaaggcgg tgaccggtgg aaatgttcgc gagggaccgg ggatcggcgc
     1921 gcgagtgatg ttttcggtac agccgggaga ttcgctgacc ggttattcct acgtggacga
     1981 gtggatccgg atcagcgacg gggaaggacg cggtgggtgg atctttcgca atctcgtcga
     2041 acggcgctag ctagatcttt tgctccttga cccgggtgcg gcctgggccg gcccgctcga
     2101 tccggttccg gccggcgcgt ttggcggcat agagcgcctc gtcggcccgc gagatcactg
     2161 cctccgccga gtgcccgtgt accgggaact cggccatccc gatgctgatg gtgatctttc
     2221 gccccgggaa ctcctcggca gccacccgcg ccctgatccg ctccgccacc tgcagggcac
     2281 cgtctcccac cgtgtcggcc agcaggacgg cgaactcctc gccaccgtag cgggcagtgc
     2341 agtccaccgc gcgagtcgag gccagcagga tgctggctac cttccgcaga acctcgtcac
     2401 cggccgggtg accgaacgcg tcgttgtact tcttgaactc atccacgtcg gccatgagca
     2461 ccgtgaagga gcacttctcc cggtaggagc ggagcagctc atccgagagt cgctgggtga
     2521 ggaaccggcg gttgtgcagc ccggtgagcg catccacggt ggacaagcgc tccagctctt
     2581 cgttctgccc gcggagcttc tcgttgaccg cgtcgagctc ctggcgtccg tggcggagcc
     2641 gctcgaccat gtgattgaag acgagggtca agtcgcccac ctcgccctta gccgcgggaa
     2701 ggtctaccgc cagatcgccg ttggccacct cagccgcgcc cttggtcagg cgctcgagcg
     2761 gacggacaat cagaataccg agacgatagg caaccgcgct gaccgcgagc agtaaaccgc
     2821 ccacgatcag cagtgtcatg ttccggaacc ggagcacctg ccagtacgcc gtgtcggccg
     2881 gtatctcggc taggatcgcc caccggaccc gcggcacccg cttgaggctt cccaccacat
     2941 cggtgccggc caggctctcg tagctgacga cggttccctc gcgagccttc agcttgtcca
     3001 gcacctgctg cttcagcttg ctgcgcatca gctgggacga gccgctttgc gacccggcga
     3061 tcagggagcc ttccctcgtc atgaggtaca tctgacctga ggtgctgggc gcgaaggccc
     3121 tgagaccgtc ctcggcgccc cgcaggttga gccgggccac gagagcgccg gccatcctgc
     3181 catcggcccg ttgaaccggt acggccacca gcagaatccc cttgccgagc gactcgtccc
     3241 aggtggcgtc gccgatcagc gcgtcgccgg tgctcagctc ccgggcccaa tcaccgg
//
LOCUS       DASYRV010000359         1764 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_697973, whole genome shotgun sequence.
ACCESSION   DASYRV010000359 DASYRV010000000
VERSION     DASYRV010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_697973"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            194..475
                     /locus_tag="VGQ24_09495"
     CDS             194..475
                     /locus_tag="VGQ24_09495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455113.1"
                     /translation="MTLSALAYRRLRRFHAFTGIIPVGAPVLSGHADWFVLMRHQLRN
                     PVFFFYYGLAVLAASVHFSLGLIGLGQHGAIKPGRWVNVSYHGWEPLHL"
     gene            531..1436
                     /locus_tag="VGQ24_09500"
     CDS             531..1436
                     /locus_tag="VGQ24_09500"
                     /inference="COORDINATES: protein motif:HMM:NF013197.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455114.1"
                     /translation="MMGFAADRRSGSGDVAHTFLDELERWVAIDTSTTVPALRAALLG
                     WLRAAQAAQPSLALIHQLAARALEVANAGIAREDTVSLLRNHLVQSCAAERSDLDAAR
                     AAIAAMASRLVTERQSWIATVSHSGAVREALIHAQRSGLRPRALVAESRPLLEGRGLA
                     AKLAAADIPVWLVVDATLPLLLSQAHMVWIGADAVTDRGVLNKVGSYAVALAAREHSV
                     PLYALAERRKFLPATTGSLRIAEMPPEEVWDQPVRGMQARNIYFELVPMELLRGVVVD
                     DRVLGPSEAAAIAREHELPEELAKG"
     gene            complement(1511..>1764)
                     /locus_tag="VGQ24_09505"
     CDS             complement(1511..>1764)
                     /locus_tag="VGQ24_09505"
                     /inference="COORDINATES: protein motif:HMM:NF013319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008452 - RNA ligase activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HEV8455115.1"
                     /translation="FGSTCHGAGRQMSRTQAVRETRGRDLVAELRQVGVTVRYEGRDT
                     LREETSEAYKDVADVVRVVSGADLAQPVARLKPFIVVKG"
BASE COUNT          255 a          587 c          588 g          334 t
ORIGIN      
        1 ccggcgcacg agcgggtgcg ccgtcacggc ggcattgcgg tggctgtcgg tcgcccggta
       61 tcgcgcgccg agtacgtggt ggcgtcgacg aacgacgtga tctggttcct ggagtggctc
      121 gagcgagaat ggtcggcacg ccatgtctcc tcggcacccg cgtcgcgctg agggcctggc
      181 cggcgaaggc cccgtgacgc tctcggctct cgcctaccgc cgactgcgcc ggtttcacgc
      241 cttcaccgga atcatcccgg tcggggctcc ggtcctgagc gggcacgccg attggttcgt
      301 actcatgcgc catcagctcc gaaatcctgt gttcttcttc tattatgggc tggccgtgct
      361 cgccgccagc gtccatttca gcctcggctt gataggactc ggacagcacg gggcgatcaa
      421 gcccggccgt tgggtcaacg tcagctatca tggttgggag ccgctgcatt tatgacgctc
      481 ttcaccgcgg gtcttggggc gatggtcgct ttcgttacgc acccgacacc atgatgggct
      541 tcgctgccga ccggcgttcg ggatcgggag atgtggctca caccttcctg gacgaacttg
      601 aacgctgggt agccatcgat acctcgacca ccgtccccgc gctgcgcgct gcgctattgg
      661 gctggttgcg tgcggcccaa gccgcccagc cctcgctggc gctcattcat cagctggccg
      721 cacgagcgct cgaggtagcg aacgccggga tcgctcgtga ggacaccgtt tccctgctca
      781 ggaatcatct cgtgcagtca tgcgccgccg agcgctccga tttggatgcg gcccgggcgg
      841 caatcgccgc catggcctcg cggctcgtca ccgagcggca atcatggatc gccaccgttt
      901 ctcatagcgg cgcggtgcga gaagcgctca ttcacgccca gcgttcggga ctcaggccgc
      961 gggcgctggt ggctgagagc agacccctcc tcgagggccg gggcctggcg gccaagctgg
     1021 ccgccgccga cattcccgtg tggctggttg tggacgcaac gcttccgctg ctgctctcgc
     1081 aagcccacat ggtgtggatc ggtgccgacg cggtgaccga tcgcggagtg ctgaacaaag
     1141 tgggatcgta tgctgtcgcc ctcgctgccc gcgagcattc ggtacccctc tatgcgctgg
     1201 ccgagcgccg gaagttcctg ccggccacga ccggctcgct cagaatcgcc gagatgccgc
     1261 ccgaggaggt ctgggatcaa ccggttcgcg ggatgcaggc gcgcaatatc tatttcgagc
     1321 tggtgcccat ggaactgctg cgcggcgtgg tggtcgacga tcgggtgctg gggccaagcg
     1381 aggccgcggc cattgcgcgc gagcacgagc ttcccgagga gttggccaag ggatgatgcg
     1441 tcatgagcgg ttgagcgggg tgggcttgaa tcgatgaacc acgctcgcgt gcatgcgcgg
     1501 ttgagcggga tcagcccttg acgacgataa acggcttgag ccgtgccacc ggttgggcca
     1561 aatcggcccc actcaccacc cgcaccacgt ccgcgacatc tttgtaggct tcgctggtct
     1621 cctcgcgcag cgtgtcccgt ccttcatagc gcaccgtcac tccgacctgc ctgagttccg
     1681 ccaccaggtc gcgcccgcgg gtctcgcgta ccgcttgcgt gcggctcatc tgacggccgg
     1741 cgccgtggca cgtcgagccg aagg
//
LOCUS       DASYRV010000360        11869 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3190538, whole genome shotgun sequence.
ACCESSION   DASYRV010000360 DASYRV010000000
VERSION     DASYRV010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11869
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3190538"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..380
                     /locus_tag="VGQ24_09510"
     CDS             <1..380
                     /locus_tag="VGQ24_09510"
                     /inference="COORDINATES: protein motif:HMM:NF015113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HEV8455116.1"
                     /translation="ELPAVGFGMGDVVLGELLKDRSLAPSDVSSIDVFLAFITREDLP
                     QVLSLAHRLRDAGLRVEYALSPQTVGKQLKLADARHARLAAVVGPDERTRGEIVIKDL
                     QSGSQETVSLQSSVDIIKARTHG"
     gene            373..1821
                     /gene="proS"
                     /locus_tag="VGQ24_09515"
     CDS             373..1821
                     /gene="proS"
                     /locus_tag="VGQ24_09515"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEV8455117.1"
                     /translation="MADNKALTTRAADFSAWYNEVIARAELADYSPVRGCMVIRPNGY
                     AIWEQMQRALDQMFKDTGHQNAYFPLFIPQSFLSREAEHVEGFAPEVAVVTHGGGKEL
                     EEPLIIRPTSETIIYAMYAKWIQSYRDLPLLINQWANVVRWEMRTRLFLRTTEFLWQE
                     GHTAHATDAEAEEEARRMLGVYRSFMEGWMAMPVLTGRKTDSERFAGAVRTYSTEALM
                     QDNKALQAGTSHNLGQNFSRAFEVTFQTASGDLDHVWNTSWGVSTRLVGALIMTHSDD
                     LGLVCPPKLAQYQVVIVPIYKTDEERAAVLQAADRLRQDLAGAGIRIYMDAREGVKPG
                     AKYYEWEGRGVPLRLEVGPRDVASGSVVLARRTGGKKESLPMDGLASKLITAMDKFQS
                     DLFEAAKARREAATLRGATREQFIARMENQGGFVYAGFCGSGTCEAEIKEQTKATIRV
                     LPDEEFRSPVTPTTCVWCGRPSVAEAVWAKAY"
     gene            1803..3113
                     /gene="lysA"
                     /locus_tag="VGQ24_09520"
     CDS             1803..3113
                     /gene="lysA"
                     /locus_tag="VGQ24_09520"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR01048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEV8455118.1"
                     /translation="MGEGVLRRAGSPGRLLDLFAEAGLSRNAGTLVFSGVPLNEIAEG
                     VGTPVFAYNAEAIRSRYRTLDESLAPVPHRVCFAVKANSNLAVLRILRDLGAGADIVS
                     GGELSRALAAGFSPDRIVFSGVGKTAEELQAAVKTGVGHLNIESREELELLGRIADAQ
                     GKEVQVGIRVNPGVTTDTHPYISTGKSGIKFGVPSDQVVPAAEYVLRHPKLRLTTLAM
                     HLGSQLVTTEPFIEGIGRLLELIERLKRLGVTTLRIIDIGGGLGIRYAEEPSLDPAAF
                     ASAVLPLLAPTGLTVYLEPGRFLVGSAGVLLTRVLYRKHSGGKEFVVVDAGMNDLVRP
                     SHYQAYHEIVEVEERRRPASRVDVVGPVCETGDFLALDRMLPGLVAGDALAVLGAGAY
                     GFVMASNYNSRPRPAEVVVDEGRWWVARPREKIEELFRAERLAE"
     gene            3110..4669
                     /gene="guaA"
                     /locus_tag="VGQ24_09525"
     CDS             3110..4669
                     /gene="guaA"
                     /locus_tag="VGQ24_09525"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003771338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEV8455119.1"
                     /translation="MTANHHDGILIIDFGSQYTQLIARRVREAHVYCEIHPPSRTVAW
                     IREWKPKGIILSGGPNSVYGESVPTADPELLELGTPVLGLCYGMQLLAYLSGGKVTRA
                     SRREYGRASLRVEGGRLFQGFGAGEETPVWMSHGDHVDAPPPHYHVTASSVNSPIAAF
                     EHDHRPLFGVQFHPEVAHTPRGGEILNNFLFEICGCTPDWTPGHFVETEVERIKEIVG
                     PARRVICGLSGGVDSSVAAVLVHRAVGDRLTCIFVDHGLLRLHERDQVEQTFRRHLGI
                     DLRVVDARSRFLEKLAGITDPEEKRRRIGHTFIDVFETEARSVGKDVGFLVQGTLYPD
                     VIESLSPLGGPSVTIKTHHNVGGLPERLPFKLLEPLRELFKDEVRQVGRELGLPEEMV
                     GRHPFPGPGLAIRILGDVTPENLEILRRADHIYTEEIRGAGLYDEIWQAFAVLLPIRS
                     VGVQGDGRTYDQVIALRAVTSRDGMTADWFAFPPEVLARVSNRIANEVEGVNRVVYDV
                     SSKPPATIEWE"
     gene            complement(4671..6824)
                     /locus_tag="VGQ24_09530"
     CDS             complement(4671..6824)
                     /locus_tag="VGQ24_09530"
                     /inference="COORDINATES: protein motif:HMM:TIGR04514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GWxTD domain-containing protein"
                     /protein_id="HEV8455120.1"
                     /translation="MVIPLTSHLSLLTGQTPTPQTAFEQFRDSLATSSDTALLRTKLR
                     KTLKGSEAPALSARLRAGLIGLRLGELRADPDFSEALSSFRRAARLSPERPEPWYGLG
                     LSQAARAQWEMRDPLRLGNRVGLGALERSADYYARALEADPRFLPAALALAQVTIALM
                     DTVRLGQASDALRRVAQAVPVRPPDFLLALGQVERCAGELDSAVISFERYLLTGGARG
                     LGLLELARTRLALGRADGEGPYYEGASLDDPGVVAEYRADLEILAGDDLREFDSLKGQ
                     ARATYLHRFWTERDHWELRPEGERLREHYRRLLFARTHFPLTISRRFYGPLDAYRSGN
                     NEVDDRGIIYIRHGEPADRLRPFVFGVMPNESWRYVRAEGDLLFHFSAGYDSNGGGDL
                     YDYRLVQSVLDLHGAADAPRDQLLLSRQSLSPVYSRMLNWGRFGSANEGARERNIGKT
                     SIEVGTTTDTYELRFHRRLTAVADLIAVGRSAGGSLAHLVFGIAAPGTSPQLVAAGAT
                     YAVRVRLVALGGGDRAVATLDTTIVLALSGPLTKREYLVGRAQLTLPAGRWRYRTALQ
                     QGDSAGVVLPLGSVRVAVTDGSALSLSDIALGTEGRAVSWVTDAADTVLLAPSELFRK
                     GAEIETYYEVTGAEPFGQYRHEISVLPWNARGPKRRALVSLSFEEEAAGEVIRSRRTV
                     RLERLKPGNYVVEVKVTAPDGSFQVRQRAIRLIKP"
     gene            complement(6939..7391)
                     /locus_tag="VGQ24_09535"
     CDS             complement(6939..7391)
                     /locus_tag="VGQ24_09535"
                     /inference="COORDINATES: protein motif:HMM:NF012579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEV8455121.1"
                     /translation="MQLRDYFETSAVSLALRSGSKDEILAELVGLLRMDERSSGTLLR
                     MLQRRENLGSTGVGRGIAIPHCRSLVVSRLRLAFGHLAGGAEFQAIDGKPVFNFFLIV
                     APPLEISNQYLPVLGKIAQLAKEPDVPDRLDALKSPDEFFRLLQEKGV"
     gene            7503..8486
                     /gene="dusB"
                     /locus_tag="VGQ24_09540"
     CDS             7503..8486
                     /gene="dusB"
                     /locus_tag="VGQ24_09540"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HEV8455122.1"
                     /translation="MQLPYLSSPEFPLILAPMAGVSEAPFRQICRRMGADLVLSEFLS
                     SEAIRRRIRTTLEGAEFEEVERPIGIQIYGADPNAMAEAAGLITEHYQPEFIDINFGC
                     PVKKVVQRNGGSGCLRDLDLVMRIIRAVIGATHLPVTVKTRSGWNDETRDPVSIALRM
                     QDAGARAFTLHARTRTQMFSGKASWDEIAQVTEALDIPVIGNGDLETASDIVRMREHT
                     GCAGAMIGRGAFGNPWLFRDGQALLAGRPLPPAPDAAERFAIALEHARLATRLQGETR
                     RTVMEFRKHLGWYTRGLHGSSGLRQRLFQIESIGEAETIFLEYLEPVARVA"
     gene            8483..9238
                     /gene="larB"
                     /locus_tag="VGQ24_09545"
     CDS             8483..9238
                     /gene="larB"
                     /locus_tag="VGQ24_09545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018281842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarB"
                     /protein_id="HEV8455123.1"
                     /translation="MRAEQLESLLAEVAAGRLTPRAALDRLRHLPFEDLPFARIDHHR
                     SLRQGQPEVVFCEGKTPDQVVAICERLEAVGGTFLGTRASESVAARLRDRFPRMIWNP
                     LARVVHLPPSEQRERAPVTGTILVVSAGTSDLPVAEEAAVVAEAFGHTVERLVDVGVA
                     GMHRLLAAGELLQGARVLIVVAGMEGALPSVVGGLVAAPVIAVPTSVGYGASFGGLAA
                     LLAMLNSCAAGVTVVNIDNGFGAAAAASRICRS"
     gene            9235..10173
                     /locus_tag="VGQ24_09550"
     CDS             9235..10173
                     /locus_tag="VGQ24_09550"
                     /inference="COORDINATES: protein motif:HMM:NF013694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CorA family divalent cation transporter"
                     /protein_id="HEV8455124.1"
                     /translation="MTVRTIVNSSEPPFVWVDVVDPTPDELSDVARRYNLHPTSVEDS
                     LEPEHLPKYERIGSTTFIIVRAIDTAAPGDCSTLHELTRKVAIFYGTDFLITIHRTEQ
                     PFLTEIIEEYRNTAPPDGVEERRKGFLPRLLIYIVNGAIATYQKPLEDAETAIDMFEA
                     TVFGEHEFTGLLRRIYLVKRRVTLMRRMLSHTLDAVKKLVPGSEPTAPLYQDLRENAE
                     SMHFYADELLEDVNNLLSIQLALASHRTNEVVRVLTVFSVFFLPLTFIVGVYGMNFAH
                     MPELRERWGYPAVLAGMGFVTLMIYSWFRRRGWLRG"
     gene            10170..11576
                     /locus_tag="VGQ24_09555"
     CDS             10170..11576
                     /locus_tag="VGQ24_09555"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEV8455125.1"
                     /translation="MTDPLGLLVVAAGAAVAGWMVGRRPQRTRLGPGAGPHLLPDPAL
                     DWLRRAHQAIGVWITELDPREEGPRAERILDAERLSVAQIVAVDRRLERARDQGQSGA
                     ERMDSGTLVFHAEGGAAVGLLLPSQFEATRLDGVEDDLRRLLEGVRRRPEVVALAQAQ
                     TQEASLESVGSVGLRLAYQLERTLNVQVVVAALDTSGVRVIGVSGRGDRRLLDSFLPP
                     ESELARVAQGSLEPHVSDADPLGGVVADRRNRSGSVLLLPMRREAQAVGAVAIWLSGG
                     QEPTGSVRAELMEALDNAAPRIARALDADQHKRAATIDPLTGLHNRRGFDEVFNLITA
                     KAGALVYCDVDRFKSLNDTLGHPAGDAALVHFARILREQIRTCDVAGRIGGEEFAVWL
                     PETGLDLGVRIAERIRLKLGTTAWDWRGRNWPLSASFGVASCPDTSSSLDNLPAQADA
                     ALYVAKRCGRNRVERAGR"
BASE COUNT         2029 a         3813 c         3922 g         2105 t
ORIGIN      
        1 tggagctgcc ggccgtcggt ttcgggatgg gggatgtcgt gttgggggaa ttgctgaagg
       61 accggagcct ggctccgtcg gatgtttcca gcatcgacgt gtttctcgcg ttcatcaccc
      121 gggaagacct cccgcaggtg ctctcgctcg cgcaccggtt gcgcgacgcg ggcctgagag
      181 tggaatacgc gctgagtccg cagacggtcg ggaagcagct gaagctcgcg gatgcgcgtc
      241 acgccaggct tgccgccgta gtcggccccg acgagcggac ccgcggcgaa atcgtgatca
      301 aggatctcca gagcggctcc caggagacag tttctctcca atcgtcggtc gacatcatca
      361 aggcccgcac ccatggctga caacaaggcc ctgaccactc gcgctgcgga cttcagcgcc
      421 tggtacaacg aggtcatcgc ccgggccgag ctggccgact acagtcccgt acgcggctgc
      481 atggtcatcc ggcccaacgg ctatgccatc tgggaacaga tgcagcgggc tctggaccag
      541 atgttcaagg acaccggcca tcagaacgcc tacttcccgc tcttcattcc ccagagcttt
      601 ctctctcgcg aggcggagca cgtggagggg ttcgcaccgg aggtggcggt ggtgacccac
      661 ggcggcggca aggagctgga agagccgctc attatccggc ccacctcgga gacgatcatc
      721 tatgcgatgt acgccaagtg gatccagagc taccgcgatc ttccactgct gatcaatcaa
      781 tgggccaacg tggtccgctg ggagatgcgc acccggctct ttctccgcac caccgagttt
      841 ctctggcagg aagggcatac ggcccacgcc accgacgcgg aggcggaaga agaggctcgg
      901 cgtatgctcg gggtctaccg cagcttcatg gaaggctgga tggccatgcc ggtgttgacc
      961 ggccggaaga ccgacagcga gcgcttcgcc ggggcggtcc ggacgtatag cactgaagcc
     1021 ctcatgcagg ataacaaagc gctccaggcg ggcaccagcc acaatctggg gcagaatttc
     1081 tcacgcgcct tcgaggtcac cttccagacc gccagtggag acctcgacca cgtgtggaac
     1141 acgtcctggg gtgtgtccac tcggctggtc ggggcgctca ttatgacgca cagcgacgac
     1201 ctcgggctgg tgtgcccgcc caagctggcg cagtaccagg tggtcatcgt tcccatctac
     1261 aagaccgatg aggagcgcgc cgcggtgctc caggccgccg atcggctgcg acaggacctg
     1321 gccggcgcgg gaatccggat ctacatggat gcgcgcgagg gagtaaagcc gggcgccaag
     1381 tattatgagt gggagggacg gggcgttccg ctccggctcg aggttgggcc tcgcgatgtg
     1441 gcatccggat cggtggtgct ggcccggagg accggcggta agaaggaaag cctcccgatg
     1501 gatggcctgg ccagcaaact catcaccgcc atggacaagt tccagtccga tctgttcgag
     1561 gccgccaaag cccggcgcga agcggccacc ctgagaggag ccacccggga gcagttcatc
     1621 gcccggatgg agaaccaggg cggcttcgtc tacgccggct tctgcggctc cggcacgtgc
     1681 gaggccgaaa tcaaggagca gaccaaggcg accatccgcg tgttgccgga cgaagagttc
     1741 cgttctccag tgacacccac cacctgcgtc tggtgcgggc gaccgagtgt ggccgaggcc
     1801 gtgtgggcga aggcgtactg aggcgggcgg gctcgccggg gaggctgctc gacctgtttg
     1861 ccgaagctgg gctctcgcgc aacgccggca cgctggtctt ctccggtgtg ccgctgaacg
     1921 agatcgccga gggcgttgga acgccggtgt tcgcatacaa cgcggaggcc attcggagcc
     1981 gataccgtac cctggatgaa tcgctggctc cggtgcctca tcgcgtctgc tttgcggtca
     2041 aggcaaacag caacctcgcc gtattgcgga tccttcgtga cctgggtgca ggcgcagaca
     2101 tcgtatcagg aggggagctg tcgcgggccc tggcggcggg gttcagccct gatcgtatcg
     2161 tgttcagcgg ggtagggaag accgcggagg agctccaggc tgcggtgaag accggggtcg
     2221 ggcacctcaa catcgagtcg cgcgaggagc tcgagctgct gggacgcatc gccgatgccc
     2281 aagggaagga agttcaagtc ggcatccggg tcaatcctgg tgtcaccacc gacacgcatc
     2341 cttatatctc caccggtaag agcggaatca aattcggggt tccctccgat caggtagtcc
     2401 ccgccgccga atacgtcctc cggcacccga agcttcgcct caccacgctt gccatgcacc
     2461 tggggagcca actcgtcacc accgagccct tcatcgaggg gatcggccgc ctgctcgagt
     2521 tgatcgagcg gctgaaacga ctcggtgtga ccaccctgag gatcatcgat atcggtggcg
     2581 gtctcgggat ccgctatgcg gaagagccat cgctcgatcc cgctgccttc gcatcggcgg
     2641 tgctccccct gctcgcgccc accggtctga cggtgtacct ggagcccgga cgctttctcg
     2701 tgggcagcgc cggtgtgctc cttacccgag tactgtatcg caagcactcc ggaggcaagg
     2761 agtttgtggt ggtcgacgcc ggcatgaacg acctggtgcg tcccagtcac taccaggcgt
     2821 accacgagat tgtcgaggtg gaggagcggc gacgccccgc ctcccgggtg gatgtcgtcg
     2881 gcccggtctg cgaaacgggt gactttctgg cgctggaccg gatgctcccg ggcctcgtgg
     2941 ccggcgatgc gttggcggtg cttggtgccg gcgcctacgg cttcgtcatg gcctcgaact
     3001 acaacagcag gccccggccg gcggaggtgg tcgtcgatga ggggcgctgg tgggtggctc
     3061 gcccgcggga gaaaatcgag gagttgttcc gagctgagag attggcggaa tgaccgcaaa
     3121 ccatcacgac ggaattctga tcatcgactt tggctcccag tacacccaac tgattgcccg
     3181 gcgggtacgg gaggcgcacg tctattgtga gatccatcct ccttcgcgta cggtggcctg
     3241 gatccgggag tggaagccca aggggatcat tctctcgggt gggcccaatt cggtctatgg
     3301 cgaaagtgtt cccaccgccg atcccgaact gctcgagctc ggcacgccgg tgttgggcct
     3361 ctgctatggc atgcagctgc tggcttacct ctccggtggt aaggtcaccc gggcgagccg
     3421 gcgcgagtac gggcgggcca gccttcgggt ggaggggggg cgcctgttcc aggggttcgg
     3481 ggcgggggag gagacccctg tctggatgag ccatggcgat catgtggatg cgccgccccc
     3541 ccattatcac gtcacggcct cgagcgtgaa ctcgccgatc gcggcctttg agcacgatca
     3601 ccgccccctg ttcggtgttc agttccaccc ggaagtggcg catactcccc ggggcggcga
     3661 gatcctcaac aacttcctgt tcgagatctg cggctgcacg ccggactgga ccccgggtca
     3721 ttttgtcgag accgaagtcg agcgcatcaa ggagatcgtc ggccctgcca ggcgagtgat
     3781 ctgcggcttg tccggcgggg tggactcctc ggttgccgcc gtcctggttc accgcgcggt
     3841 cggcgaccgg ctgacctgca tcttcgtgga ccacggactg ctccgtctgc acgagcggga
     3901 ccaggtcgag cagaccttcc gccggcacct cggcatcgac ctccgcgtgg tggacgcccg
     3961 ctcccgtttt ctcgagaagc tggccggcat taccgatccg gaggaaaagc gccggcggat
     4021 cggccacacg ttcatcgatg tgttcgagac ggaagcaagg tcggtcggaa aggacgtcgg
     4081 attcctggtc caggggacgc tataccctga cgtgatcgag tcgctctcac cgctgggtgg
     4141 gccctccgtc accatcaaga cgcaccataa cgtcggtgga cttcccgagc ggctgccctt
     4201 caagctgctg gagccgctcc gggagctctt caaggacgag gttcgccagg tggggcgcga
     4261 gctcgggttg ccggaagaga tggtgggccg ccacccgttt cccggtcccg gtcttgccat
     4321 tcggatcctg ggcgacgtca cgcccgagaa tctcgagatc ctccgccgcg ccgaccacat
     4381 ctacaccgag gagatccgag gcgcgggact ctacgatgag atctggcagg cgttcgccgt
     4441 gctgctcccg atccgctcag tcggagtcca gggtgacggc cgcacctacg atcaggtcat
     4501 cgccctccgc gccgtgacca gccgcgacgg catgactgcg gattggttcg ccttccctcc
     4561 cgaggtgctg gcccgggtat cgaatcggat tgccaacgag gtagagggag taaatcgagt
     4621 ggtatatgac gtgagctcca agccacctgc aactatcgaa tgggagtgag tcagggtttg
     4681 atcaaccgga tggcacgctg tcggacctga aagcttccgt ccggcgccgt caccttcacc
     4741 tccacgacgt agtttccggg cttcaggcgc tcgagccgta cggtccggcg cgaacgaatg
     4801 acttcaccgg ccgcctcctc ttcgaacgac agcgacacca aagcacgccg tttgggtccc
     4861 cgcgcgttcc acggtagcac cgagatctcg tgccggtatt gtccgaaggg ctccgcgccg
     4921 gtcacctcat aataggtctc gatctccgcg cctttcctga agagctcgga tggcgccagg
     4981 aggacggtgt ccgccgcgtc ggtcacccag gagacggctc gcccttccgt gcccagcgcg
     5041 atgtcgctga gtgaaagcgc gctaccgtcg gtcacggcga ctcgcacgga ccccagcggc
     5101 agtacgacgc cggcgctgtc gccctgctgc aaggccgtcc ggtagcgcca gcgaccggcc
     5161 ggaagagtga gctgggctcg acccaccagg tactccctct tcgtcagcgg cccggagagt
     5221 gcgaggacga tggtcgtgtc caacgtggcg acagccctat ccccgccgcc gagagcaacc
     5281 agccgcacgc gcacggcgta cgtcgccccc gcggcgacca gctggggcga ggtaccgggc
     5341 gcggctattc cgaaaaccag atgtgccagg cttccgccgg cgctccgtcc caccgcaatc
     5401 aggtcggcca cggcggtcag ccggcggtga aagcggagct cgtacgtgtc cgtcgtcgta
     5461 cccacctcga tgctggtctt tccgatgttg cgttcccgcg ccccctcgtt ggcggagcca
     5521 aaccgacccc agttgagcat ccggctgtac accggagaca gagactggcg ggagagaagc
     5581 aactggtctc tcggcgcatc tgccgccccg tgcaggtcga ggacgctctg aaccagacgg
     5641 tagtcgtaca gatcgccgcc gccgttacta tcgtatccgg cgctgaaatg aaacaggaga
     5701 tcgccttcag cccgaacgta tcgccaggat tcattaggca tcaccccgaa cacgaagggt
     5761 cggagcctat cggcaggttc accgtggcgg atgtaaatga tgccgcgatc atccacctcg
     5821 ttattgcccg aacggtatgc gtcgagcggg ccgtagaagc gacgacttat ggtgagagga
     5881 aagtgggtcc tggcgaagag aagccggcgg tagtgttccc ggaggcgctc accttcgggc
     5941 cggagctccc agtgatcccg ctcggtccag aagcggtgca ggtatgtggc ccgggcttga
     6001 cccttgaggc tatcgaattc cctgaggtcg tcccctgcga ggatctccag gtccgctcgg
     6061 tattcggcaa ccactcccgg gtcgtccaga gaagcgccct cataatacgg cccctcaccg
     6121 tcggcgcggc ccagtgctag ccgggtacgg gcgagctcca gcagtccaag gccacgagct
     6181 ccccccgtca gcagatagcg ctcgaagctg atcacagcgg aatcgagctc gccggcgcac
     6241 cgctccacct ggcccagtgc gagcaaaaaa tctggaggtc tgacgggcac cgcctgcgcc
     6301 acgcggcgga gggcgtcgct ggcctggccc aggcgaaccg tgtccatcag ggctatcgtg
     6361 acttgtgcca gtgccaaggc tgccggcaga aagcggggat cagcctcgag cgctcgggcg
     6421 taatagtccg cggatcgctc gagagccccg aggcccactc ggttccccag cctcagcggg
     6481 tcacgcatct cccattgagc gcgagcagcc tgggacaggc ccaggccata ccagggctcg
     6541 ggccgctccg gggatagtcg cgccgctcgg cggaagctcg acagcgcctc actgaaatcg
     6601 gggtccgcgc gcagctctcc cagccgcaat ccgatcaggc cggcacgaag ccgggccgac
     6661 agggccgggg cctccgagcc cttgagggtc ttccggagct tcgtccgaag aagggctgta
     6721 tcggagctgg tggcgagcga gtcgcggaac tgttcgaagg cggtctgcgg agtgggagtc
     6781 tggccggtaa gaagtgagag gtgagaggtg agagggatga ccaagcacgc gagagttctc
     6841 ggcaggagca cgggaaccca tgatgacggc agtcgatcct ggttacctct cacctctcac
     6901 ctctcacctc ttccttctga cgttccacct ctcagcccct acactccctt ctcctggagc
     6961 agccgaaaga attcgtcggg cgacttgagc gcatccagac gatcgggaac atccggctcc
     7021 ttggccagtt gggcgatctt ccccagcacc ggcaggtatt ggttggaaat ctcgagcgga
     7081 ggcgccacga tcaggaagaa gttgaagacc ggcttgccat cgatggcctg gaactcggcg
     7141 ccgccagcca ggtggccgaa cgccagccgc agccggctca ccaccagcga ccggcagtgc
     7201 gggatggcga tcccacgacc cactcctgtc gagcccaggt tctcccgtcg ttggagcatg
     7261 cgcaacaacg tcccggatga tcgctcgtcc atccgcagca ggcccaccag ctccgccagt
     7321 atctcgtcct tggagccgct gcgtagagcc aagctgacgg cactcgtctc gaagtagtct
     7381 ctgagctgca tactgtccac gcgtagctgg ttggtcgatc ggcgaggtgg gcccaggcca
     7441 cctaattcta gagccgggct tcttccattg ctacctatca ggcggccaag tattttatcc
     7501 ccatgcagtt gccttatctc tcctcgcccg agtttcccct cattctggcg ccgatggccg
     7561 gagtgtccga ggcgcctttc cgccagatct gccggcgtat gggcgcggac ctcgtgctgt
     7621 ctgagtttct ctcctccgaa gcgatccgcc gccggatcag gacgacgctc gaaggcgcgg
     7681 agttcgagga ggtcgagcgg ccgatcggaa tccagatcta cggtgcggac cccaacgcca
     7741 tggcggaggc cgccgggctc atcaccgagc actaccagcc tgaattcatc gatatcaact
     7801 tcggctgccc ggtgaagaag gtggtgcagc gcaatggtgg gtcgggctgc cttcgggatc
     7861 tggatcttgt gatgcggatc atccgtgcag tcatcggcgc cactcacctg ccggtaacgg
     7921 tgaagacgcg gagcggctgg aacgatgaga cccgtgaccc ggtgagcatc gcgctgcgga
     7981 tgcaagacgc cggcgcccgg gcttttaccc tgcatgcccg cacccggacc cagatgtttt
     8041 ccggcaaggc cagctgggat gagatcgccc aggtgaccga ggcgcttgac attccggtga
     8101 tcggcaacgg cgatctcgag accgcgagcg acatcgttcg tatgcgggaa cacaccggct
     8161 gtgctggcgc catgatcggg cgcggcgcct tcggcaatcc gtggcttttc cgtgacggcc
     8221 aggccctgct ggccgggcgg ccgctgccac cggcgcccga tgccgccgag cgctttgcta
     8281 tcgcgctcga gcacgcccga ctggccaccc ggctccaggg cgagacccgc cgcaccgtga
     8341 tggagttccg caagcacctg ggctggtaca cccggggcct gcacggctcc agcgggttgc
     8401 gccagcgcct cttccaaatc gaatcgatcg gggaagccga gacgatcttc ctcgagtatc
     8461 tcgagccggt cgcccgggtg gcgtgagagc cgagcagctc gagagcctgc tcgccgaggt
     8521 ggccgcgggt cgcctgacac cgcgggcggc gctcgatcgc ctacgtcatc tccctttcga
     8581 agacctcccc tttgcccgaa tcgatcacca tcgctccctc cgccagggac agccggaggt
     8641 ggtgttctgc gaaggcaaga cgccggatca ggtcgtcgcc atctgtgagc ggctggaggc
     8701 cgtcggaggc acgttcctgg ggacgcgggc gagtgagtcg gtcgccgctc gactgcggga
     8761 tcggttccct cgaatgatct ggaaccccct cgcgcgcgtc gtacacctgc ctccaagcga
     8821 gcagcgggag cgtgcaccgg tcaccggcac catcctcgtg gtgtcagccg gcacgagtga
     8881 tcttcccgta gccgaggagg cggccgtagt ggcggaggcg ttcggccata cggtggagcg
     8941 attggtggat gtcggggtgg caggaatgca tcggcttctg gccgccgggg agctgttgca
     9001 gggggctcgc gtgttgattg tggttgcggg tatggagggc gcccttccga gcgtcgtggg
     9061 aggcctggtg gccgcgccgg tgattgcggt gccgacgagt gtcggttacg gtgcgtcatt
     9121 cggcgggctg gccgcgcttc tggccatgct gaattcctgt gcggcggggg tcaccgtggt
     9181 gaacatcgac aacgggttcg gcgctgctgc ggccgccagc aggatctgtc ggtcatgacc
     9241 gtgcgcacaa tcgtcaacag cagcgagccc ccattcgtct gggtggacgt cgttgacccc
     9301 acgcccgatg agctatccga tgtcgcccgg cgctacaatc tccatcccac ctcggtggag
     9361 gactcgctcg agccggagca cctgcccaaa tacgagcgga tcggatcgac cactttcatc
     9421 atcgttcggg ccatcgatac cgccgctccc ggggattgtt cgaccctgca cgagctgacc
     9481 cgcaaggtcg cgatatttta cggcaccgat ttcctgatca ccattcatcg caccgagcag
     9541 ccgttcctca ccgagatcat cgaggaatac cggaacacgg cgccacctga tggcgtggag
     9601 gagaggcgca aggggtttct ccctcgcctg ctcatctaca ttgtcaatgg tgccatcgcg
     9661 acataccaga agccgctgga ggatgcggag accgcgatcg acatgttcga ggccactgtc
     9721 ttcggcgagc acgagttcac cggcttgctc cggcgcattt acctggtcaa acggcgggtg
     9781 acgctgatgc gacgcatgct ctcgcacact ctcgacgccg tgaagaaact ggtgccgggt
     9841 tccgaaccga cggcgccgct ctaccaggac ctgcgggaga acgccgagag catgcacttc
     9901 tatgccgacg agttgctgga agacgtcaac aatctgctca gcatccagct tgcgctagcc
     9961 tcgcatcgga ccaatgaggt cgtccgagtg ctcacggtgt tctcggtgtt ctttctgccg
    10021 ctcacgttca tcgtcggcgt ctatgggatg aacttcgcgc acatgccgga gctgcgggag
    10081 cgctgggggt atcccgccgt cctggccgga atgggatttg tgaccctgat gatctattcg
    10141 tggtttcggc ggcggggctg gctgcgggga tgaccgatcc cctcggcctg ctcgtcgtgg
    10201 cggccggcgc cgcggtcgct gggtggatgg tcggtcgtcg gcctcaacgt actcggctgg
    10261 ggccaggcgc aggcccgcac ctccttcccg atccggcact cgattggctc cgtcgcgcgc
    10321 accaggccat cggcgtgtgg atcaccgaac tggatccgcg cgaagaaggg ccccgggccg
    10381 agcggatcct ggatgccgaa cgactatctg tggcgcaaat cgtcgcggtg gatcggcggc
    10441 tggagcgggc ccgggaccag gggcagagcg gcgccgagag gatggacagc ggcacgctgg
    10501 tcttccacgc cgaaggcggc gctgccgtag ggctgctgct cccatcccag ttcgaggcga
    10561 cacggctcga tggcgtagag gacgatctcc gtcgtctcct cgagggagtt cggcgcagac
    10621 cggaagttgt ggcgctcgct caggctcaga cccaggaggc gtcgctcgag tcggtcggaa
    10681 gcgtcggtct ccgattggcc tatcagctgg agcgcaccct gaatgtgcag gtagtggtcg
    10741 cggcactcga caccagcggg gtccgggtga tcggagtgtc cggccgcggc gaccggagac
    10801 tcctggacag ctttcttcct cccgagagcg agctcgcgcg ggtagcgcag ggcagcctcg
    10861 agcctcacgt ctccgacgcc gatcctctgg gcggcgtcgt cgccgatcgg cggaaccggt
    10921 cgggctcggt cctcttactc ccgatgcgac gggaggccca ggccgtcggc gcggtggcaa
    10981 tctggctctc gggcggacag gaaccgaccg gctcggttcg agccgagctc atggaggcgc
    11041 tcgacaacgc cgctccccgc atcgctcgcg cactcgacgc cgaccagcac aagcgtgccg
    11101 ccaccatcga tccgctgacg gggctgcaca accggcgcgg gttcgatgaa gtgttcaatc
    11161 tcatcaccgc caaggccggt gcgctggtgt actgcgacgt cgatcgcttc aagagcctca
    11221 acgatacgct gggtcacccc gcaggcgatg ccgccctggt tcacttcgcc cggatcctcc
    11281 gggagcagat ccgcacctgc gatgtcgctg ggcgcatcgg tggtgaggag ttcgccgtgt
    11341 ggcttcccga gaccgggctc gatctcggcg tccggatcgc tgaacgtatc cgtctcaagc
    11401 tgggtaccac cgcctgggac tggcggggac ggaactggcc cctgagcgcc tcgttcgggg
    11461 tggcctcctg ccccgacacg agcagcagcc tcgataacct gcccgcacag gccgatgcgg
    11521 cactgtatgt ggccaagcgg tgcgggagaa accgggtgga gcgggcgggg cggtgagggc
    11581 ggcaggcggt acggcggtat gaaggagcga actcgatccg agcgatcaag cctctaaagt
    11641 ggtttatatc tgccttgtaa gctgctgaat ccaatataga tgcgaccgtc attctaccgc
    11701 cgtaccgcct taccgcccta ccgcccggcg actttccatc cgacagttgt tccgctataa
    11761 ttcgaccacc cgggggcgac tggcttcgac gggtttgatg aaggaattgc agcgtgtcca
    11821 ggtccaggtc cctggttaaa ccacttggaa tgattcaact gccaatact
//
LOCUS       DASYRV010000361         4454 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_698845, whole genome shotgun sequence.
ACCESSION   DASYRV010000361 DASYRV010000000
VERSION     DASYRV010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4454
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_698845"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..234
                     /locus_tag="VGQ24_09560"
     CDS             <1..234
                     /locus_tag="VGQ24_09560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455126.1"
                     /translation="RAVVDSMDALKVWELPPGNLLERIGSNRSDQDAVFAELLIGTEY
                     RRFRYYDLDRVSGADVPRVRAAARLVEELVPDP"
     gene            complement(241..1146)
                     /locus_tag="VGQ24_09565"
     CDS             complement(241..1146)
                     /locus_tag="VGQ24_09565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HEV8455127.1"
                     /translation="MSLRPVREIIHTTPTMEGAGVKLQRAFGFGETKDFDPFLLLDDF
                     RNENPNDYLAGFPWHPHRGIETITYVLAGSVEHGDSLGNKGKMTAGDVQWMTAGSGIL
                     HQEMPKGDAQGRMHGFQLWANLPSSLKMTDPRYQDIAASAIPEVTDDDGTRVRVISGE
                     FWGKRGPVEGVAADPSYLDISVPPGQRKRLTVETTRNAFAYVFAGFGTFRDASDPQAV
                     LTESGADPNAPARYDADNHSLVLFDRGDEVVVRAGDEGIRFLLVSGKPIEEPVAWYGP
                     IVMNTRDQLEQAVTELRDGSFIKHR"
     gene            1369..1614
                     /locus_tag="VGQ24_09570"
     CDS             1369..1614
                     /locus_tag="VGQ24_09570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455128.1"
                     /translation="MDPQFLAPLIPIVAIIAVAAVKIARLRAARPESPSADVTARLEG
                     LEHDLQILQEELAETQERLDFAERLLSTAREERRIGS"
     gene            complement(1662..2252)
                     /locus_tag="VGQ24_09575"
     CDS             complement(1662..2252)
                     /locus_tag="VGQ24_09575"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEV8455129.1"
                     /translation="MHDHLQQLLIQHGLLAILIGSAFEGDFTLLLAGVVAHLGIFPFP
                     LAVGAGAVGSLVGDSLWYGFGRLRGPKFREGKLYRRVGPTVDRLARRLGPWELLAARF
                     VYGTKAASMLFWGLHGLSVPRFLLIDALGCIIGSFVFTGAGYLVSGSATVLLGRVKRV
                     QLWLLGALIVGVVIVYLINRTAKHELHLDEDGRTLD"
     gene            complement(2256..3947)
                     /locus_tag="VGQ24_09580"
     CDS             complement(2256..3947)
                     /locus_tag="VGQ24_09580"
                     /inference="COORDINATES: protein motif:HMM:NF013109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HEV8455130.1"
                     /translation="MLVPKLFTTLKSYSRDQLVADLTAGLIVGVVALPLAIAFAIASG
                     VTPDRGLYTAVIAGFIISALGGSRVQIGGPTGAFVVIVYGIVQKYGVDGLTVATIMAG
                     LLLIGFGLARLGAAIKFIPFPVVTGFTSGIAAILIVQQLRDVLGLRLTSAPPEFIERL
                     SLYAAQIGTINESAVALSLATLLILMLWPRVSHTVPAPFVALILTTVAAYLLHLPVET
                     IGTRFGEIRAGFPSLALPSVSLAEGRQLVGPALAIAALGAVESLLSAVVADGMIGGRH
                     RSNMELVAQGVANVVVPLFGGIPATGAIARTATNVKSGGRTPVAGIVHALTLLIITLF
                     FGRLAAVIPLATLAAIVLWVAYRMAEWRVFKNELSAPKSDAIVMVSTFLLTVLVDLTT
                     GIAVGMVLAAFLFMKRMAEVTNVTVVSRDFQDAQESGDASGAIYRRRVPPGVEVYEIN
                     GPFFFGAAEKFKDTLAEVSKKPKVLIIRMRNVPAIDSTAIHALRDLIRRTRKDRTVVL
                     LSDVRAQPLIALDRSGLLDEIGDDCMLGNIDEALAAARAHLGLPPEEDPVTRVSA"
     gene            4200..>4454
                     /locus_tag="VGQ24_09585"
     CDS             4200..>4454
                     /locus_tag="VGQ24_09585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455131.1"
                     /translation="MRVALVTEFYYPHLGGVTEHVHNLAHTLIQSGHHAIIITSHMTE
                     SGRGHEHGLTDGDPAYVHRIGTSRVVYSAGSFARVTTGIRL"
BASE COUNT          857 a         1447 c         1397 g          753 t
ORIGIN      
        1 cgagcggtcg tggattcgat ggacgcgctg aaggtctggg agctgcctcc tggcaatctc
       61 ctggaacgga tcggcagcaa caggagcgac caggatgcag tgttcgcgga gctgttgatc
      121 ggcacggagt accgccgctt ccgctactac gacctcgacc gggtgagcgg agccgatgtc
      181 ccccgcgtgc gcgccgcagc tcgactggtc gaggagttgg ttccggatcc ttgattctat
      241 ctagcggtgc ttgatgaagc tcccgtcgcg tagctcggtc accgcctgct ccagctggtc
      301 ccgcgtgttc atcacgatgg gaccgtacca cgccaccggc tcttcgatcg gcttgcccga
      361 gaccaggagg aagcggatcc cttcgtcgcc ggcccgcacc accacttcgt cgccccggtc
      421 gaacagcacc agcgagtgat tgtcggcgtc gtagcgggcg ggggcgttcg ggtcggcgcc
      481 tgactcggtc aggaccgcct gcggatccga ggcgtcccgg aacgtgccga agccggcgaa
      541 cacataggcg aacgcgttgc gcgtggtctc gaccgtgagc cgcttccgct gaccgggtgg
      601 aaccgagatg tccaggtagc tcggatcggc ggccacgcct tccaccggcc ctctcttacc
      661 ccagaactca ccggagatca cccgtacgcg ggtaccgtcg tcgtcggtga cctcaggaat
      721 ggcgctcgcc gcaatgtcct gatagcgtgg atccgtcatc ttcaacgacg agggcaggtt
      781 ggcccaaagc tgaaagccgt gcatccggcc ctgggcatcg cccttgggca tctcctggtg
      841 caggattccg ctgccggcgg tcatccactg cacgtcgccg gccgtcatct tgcccttgtt
      901 gccgagactg tcgccgtgtt ccaccgagcc ggcgagcacg taggtgatcg tctcgattcc
      961 ccggtgcggg tgccagggga atccggccag atagtcgttg ggattctcgt tccggaaatc
     1021 atcgagcagc aggaacggat cgaagtcctt ggtctcgccg aatccgaagg cgcgctggag
     1081 cttcactccg gcgccctcca tggtgggcgt ggtgtgaatg atttccctga ctggccggag
     1141 cgacatcgtt ctctcattat cggaaggtag gaacctattg gccggcaata tctacgtcgg
     1201 ccgcaccgat accaaaacag tcggcagtga cttttgttcc cggctcagca tcgcggtgtt
     1261 aaccggacgg cgtgggccgc ggtgggccaa gacgttagaa caaagttctg atagtagttt
     1321 gtcatttata gagcctgaca agagctaggc ctaaacgagg aaggccacat ggaccctcaa
     1381 tttcttgccc cactcatacc aatcgtggcg atcatcgctg tcgcggcggt caagatcgct
     1441 cgtctgcgtg ctgctcgtcc agaatcacca tcggccgacg tcactgcgcg gctcgaggga
     1501 ctcgaacatg acctccagat cctccaggag gagctggccg aaacacagga acggctcgac
     1561 ttcgcagagc gtctactcag cacggcacgc gaagagcggc gaattggcag ctagagatgc
     1621 cactcccaag ccatcttacc tcgctcccaa acgactcgcg gctaatcgag cgtccgcccg
     1681 tcctcatcca gatgcagctc gtgctttgcc gtccgattga tgaggtacac gatcaccacg
     1741 cccacgatca acgcacccaa cagccagagc tgcactcgct tgaccctgcc caggaggacc
     1801 gtagcgcttc cgctcaccag atacccagcg ccggtaaaga cgaaggagcc gatgatgcag
     1861 cccagcgcgt cgatcagtaa gaagcgcggt acagacagcc cgtggagtcc ccagaacagc
     1921 atgctggcgg ccttcgtccc gtacacgaag cgggcggcaa gcagctccca gggacccagg
     1981 cggcgggcca ggcgatcgac cgtcggaccg accctgcggt agagcttccc ctcccgaaac
     2041 ttcggaccgc gaaggcgccc gaatccgtac cacaacgagt cccccaccag gctgcctaca
     2101 gcgccggcac cgactgccaa aggaaacggg aagatgccga ggtgcgcgac gacaccggcc
     2161 agcaggaggg tgaagtcgcc ctcgaaggcc gacccgatga ggatcgcgag gagaccgtgc
     2221 tggatcagca gctgctgaag gtgatcgtgc atcggtcagg ctgacactcg cgtgaccggg
     2281 tcttcctcgg gcggcaggcc caggtgtgct ctcgcggccg cgagcgcctc gtcgatgttt
     2341 cccagcatgc agtcgtcgcc gatctcgtcg agtagccctg agcggtccag cgcgatcagc
     2401 ggctgggcac gcacatcgga gagcagtacc acggtgcggt ccttccgggt acgccgtatg
     2461 agatcgcgga gcgcgtgtat ggctgtggaa tcgatcgcgg gcacgttacg catccgaatg
     2521 atcaggacct tgggcttctt cgagacctcc gccaaggtgt ccttgaactt ctcggccgca
     2581 ccgaagaaga aggggccgtt gatctcatag acttcaacgc ccgggggaac ccgccgccgg
     2641 tagatggcgc cggaagcgtc cccgctctct tgagcgtcct ggaagtcgcg cgacaccacc
     2701 gtgacgttgg tgacctccgc catccgcttc atgaacagaa acgcggcgag caccataccc
     2761 accgcgatgc cggtcgtgag gtcgaccagc accgtcagca ggaaggtgct caccatcaca
     2821 atggcatcgc tctttggtgc gctcagctcg ttcttgaaga cccgccactc cgccatccgg
     2881 tatgcgaccc agagcacgat cgcggcgagc gtcgccaggg ggatgacggc ggccaggcgc
     2941 ccgaagaaga gcgtgataat cagcaaggtg agggcgtgta cgatgcccgc cacgggggtc
     3001 cgccctccac tcttcacgtt ggttgcagtc cgagcgatgg ctcccgtcgc cgggattcca
     3061 ccgaacagcg gtaccaccac gttcgcgacg ccctgggcca ccaactccat gttggagcga
     3121 tgccgtcccc cgatcatgcc gtcggcgacg accgcggaca ggagcgactc caccgccccg
     3181 agcgcggcaa tggcgagggc tggaccgacc agctggcgcc cttcggccag ggagaccgag
     3241 ggcagtgcca gcgaggggaa tcccgcccga atctcgccga agcgggtccc gatcgtctcc
     3301 accggaagat gcagcaggta ggcggcgaca gtggtcagga tcagggcgac gaaaggcgcc
     3361 ggcaccgtgt gactgactct gggccagagc atcagaatga gcagcgtcgc gagcgacagc
     3421 gccacggcag attcattgat cgtcccgatc tgtgccgcgt agagactcag ccgctcgatg
     3481 aattccgggg gcgcgctggt gagccgcagt cccagcacgt cgcggagctg ctgcacgatg
     3541 aggatcgcgg cgatacccga agtgaagccg gtgacgaccg gaaaggggat gaacttgatg
     3601 gcggcgccca gccgggccag accgaatcca atcaggagca gcccggccat gatcgtcgcg
     3661 accgtcagtc catccacccc gtacttctgc acgatgccgt agacgatcac cacgaaggcc
     3721 ccggtgggcc cgccgatctg cacccgcgat ccgcccagcg ccgagatgat gaacccggcg
     3781 atcacagcgg tgtagagtcc ccggtcgggc gtgaccccgc tggcgatggc gaatgcaatc
     3841 gcaagaggga gcgccacgac accgacgatc agtccggcgg tgaggtccgc caccagctgg
     3901 tcgcgcgagt agctcttgag cgtggtgaac agcttcggga cgagcatagg aggctatggg
     3961 ctaggggcta tgggctgggc cgtcaaacag aataatcggg ttgatggtcc acggcccgtc
     4021 ctgacggacg ggcctcttaa tgattccatt gggaaatgat gggacaaaat gtccggccgg
     4081 aagcgtttct cgcaggacaa atagtccctg caggacggtc aacgacgcgt cttcgccacc
     4141 cgcgggatgg ccaccttctt gccttctgga gctctcagac catcgggagc ttcctttata
     4201 tgcgtgtggc gcttgtaacc gagttctact acccgcacct cgggggcgtc accgagcacg
     4261 tgcacaacct cgcccacacc ctcattcaat ccgggcacca cgcgatcatc attacctccc
     4321 acatgacgga atccggccgg ggccatgagc acgggctcac cgacggcgat cccgcctacg
     4381 ttcacaggat cgggaccagc cgggttgtct acagtgcagg ctcctttgcc cgggtgacca
     4441 ccggaatccg tcta
//
LOCUS       DASYRV010000362         5233 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1806730, whole genome shotgun sequence.
ACCESSION   DASYRV010000362 DASYRV010000000
VERSION     DASYRV010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5233
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1806730"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1426
                     /locus_tag="VGQ24_09590"
     CDS             <1..1426
                     /locus_tag="VGQ24_09590"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEV8455132.1"
                     /translation="FSVLSLTVIPTLVLSACSGTAPRLRETPAPDPSVAIIGANLWDG
                     TGRGPVSNAVTLVRGDRIICAGAAGECLVPPRARVIDARGQWLIPGLIDSHVHLLFLV
                     GGSASEELSLDLRDLLAQGVTTVRDMGTNPAELLRRVHAMPVAPRVYAMQLVAGRRFF
                     FNGFRGTATARGRVFRQPPAMTMQSLGWTPILFNSDDDADSVVAVAREAGATGLKLYA
                     QLDLESVEKLVAAAHRVGMPVWGHAWVQPASALEQALAGQDGVVHAAGFAGELFTKAE
                     RDTLVNDGNLQMATAEVATVGSVHDPRILAALDSMARHGTFFEPTLDATRHSVAYFDA
                     KRRHIPSEQEEYVRAASGFGMEVTREAVRRGVRISAGSDHVAFGPANERASLFGELGL
                     LVDSIGLSPRAALLAATRDAARALGGEPARRLGTIEAGRYADLVLLSKSPLSDIENLE
                     SVEWIMKGGQIWRPGQLRSGIAMK"
     gene            complement(1534..2487)
                     /locus_tag="VGQ24_09595"
     CDS             complement(1534..2487)
                     /locus_tag="VGQ24_09595"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEV8455133.1"
                     /translation="MRPLRIVAGLMLGWVGACAGHTTSRLEPAPAAETTLPRLVSTEE
                     LARWQQRGPVRAVDVRADLFTYLKDHLPGALYLNIESLRASGGGIPAQLLSQRAYAEL
                     FGRLGLSFDQPVVIYSAGETRNIDATFLAWLLAGFGHPKVYVLNGGYFKWQLEQRAVI
                     PQYPRVAATRFPAGPFHPEQASLDDVRRSITTGDATLVDARPADQYAGQAGAQMRRGH
                     IPGAINHYWQNDLTQEGFGHVWKSPAELRAEYAMQGITPDKDIIVYCNSAIEASHVHF
                     TLRYLLGYPRVRIYVGSWTEWAERVDLPMEAGKRGSGEAGK"
     gene            complement(2484..3479)
                     /locus_tag="VGQ24_09600"
     CDS             complement(2484..3479)
                     /locus_tag="VGQ24_09600"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEV8455134.1"
                     /translation="MRRPVGGGPVFLPSTFLFVLILSGLAAATPAVQGKPRESTPLPL
                     RRLAEGVYAVLGDTGRGSEGRPNAGFIVTGDGVIVVDALASPRDGEALVVTIHAVTNK
                     PIKWLILTHHHPDHHFGAIVFRRLGARVIAHPDRSSLASDGGPDALLADWVRVVGLDA
                     MRGFEFANTPDRPVTGADTLRLGGRTVVITHPGAAHSAGDLTVWLPRERILFAGDLLV
                     EDGVTMVVDGSSSELLRALRGIDTLRPRTVVPGHGAIPARPGALVARTRGYIIGLRQD
                     MKSAIESGRPMGRALASLPPADETRPVSFNSRRRRNAVRVYLEEERLYMGLDSVQ"
     gene            complement(3502..3843)
                     /gene="soxZ"
                     /locus_tag="VGQ24_09605"
     CDS             complement(3502..3843)
                     /gene="soxZ"
                     /locus_tag="VGQ24_09605"
                     /inference="COORDINATES: protein motif:HMM:NF020350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate oxidation carrier complex protein
                     SoxZ"
                     /protein_id="HEV8455135.1"
                     /translation="MMTNHIGEARIKVPDRITRGEVIVVNSIISHPMDTGFFRNADGE
                     PIPAYFIKEVVVTYGEQEVARFEWTSGISRDPVVTFTVKADKEAPLTMVWTDNKGAAF
                     KQSVGISFASA"
     gene            complement(3840..4346)
                     /locus_tag="VGQ24_09610"
     CDS             complement(3840..4346)
                     /locus_tag="VGQ24_09610"
                     /inference="COORDINATES: protein motif:HMM:NF024892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate oxidation carrier protein SoxY"
                     /protein_id="HEV8455136.1"
                     /translation="MSDFTDSRRSFLRSCAMGVAGLLVSGAVSRSDGLLGATPLRGPE
                     DPEVPNEEVARILKSLFGDRPIQRGHVSLDMPAMAEDGRVVPVIIESDLPMSKAHYVK
                     GVHLIVDHNPDAHLAAFHLTPALGQVSISTRIKMKRTTWVRAILETNTGEVWAGYARV
                     LVTLNGCG"
     gene            4806..>5233
                     /locus_tag="VGQ24_09615"
     CDS             4806..>5233
                     /locus_tag="VGQ24_09615"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEV8455137.1"
                     /translation="MDTQELQEVALFEKCRQFTKARELQAIGLYPYFNPISESEDTVV
                     VIDGQKRIMLGSNNYLGLTHHPKVLEAASRALSRYGSGCTGSRFLNGTLDLHEQLENS
                     LAEFLGKEACLVFSTGYSANLGLISGLVGRGDVVYLDKLD"
BASE COUNT          939 a         1706 c         1649 g          939 t
ORIGIN      
        1 cttctcggtt ctttccttaa ctgtcatccc gacgctggtc ctgagcgcct gcagtggaac
       61 tgcgccccga ctccgggaaa ccccggcgcc tgatccctcc gttgcgatca taggagccaa
      121 tctctgggat ggtaccggcc gtgggccggt ctcgaatgcc gtcaccctgg tccgcggcga
      181 tcgaatcatc tgcgccggtg cagccggcga atgcctggtc ccaccccgtg cccgggtgat
      241 cgacgcgcgc ggtcaatggc tgattccggg tctgatcgat agccacgttc atctgctgtt
      301 cctcgtcggc ggaagcgcga gcgaggagct ttcgctcgac ctgcgcgatc tgctggccca
      361 gggcgtcacc accgtgcgcg acatgggcac caatccggcc gagcttctcc ggcgggtcca
      421 cgccatgccc gtcgcgccgc gggtgtatgc catgcagctc gtggccgggc ggcgtttctt
      481 cttcaatgga ttccgtggta cggcaacggc acgaggccgg gtcttccggc agccgcccgc
      541 catgaccatg cagtcgctcg gctggacgcc catcctcttc aattcggacg acgatgccga
      601 ctcggtggtc gccgtggcgc gtgaagctgg cgccactggt ctcaaactct acgctcagct
      661 cgatctcgag tcggttgaga agttggtggc ggccgcacat cgggtcggta tgccggtctg
      721 gggccacgcg tgggtgcagc ccgccagcgc cctggagcag gcgctcgccg gccaggacgg
      781 ggtggtgcat gccgccggat tcgccgggga gctcttcacc aaggcagagc gggacacact
      841 ggtgaacgac ggcaacctcc agatggccac cgccgaggtc gccacggtcg ggtcggtaca
      901 cgatccaagg attctggccg ctctcgactc gatggcacgg cacggcacct tcttcgagcc
      961 gacgctcgat gccacccgtc acagtgttgc atacttcgac gccaagcggc gccacattcc
     1021 gtcggagcag gaggagtacg tccgcgcagc ctctggattc ggtatggagg tgacccgaga
     1081 agccgtcagg cggggagtcc ggatcagcgc cggcagcgat cacgtggcct tcggccctgc
     1141 caacgagcgc gcctcactct tcggcgagct cggcctgctg gtggactcga tcggcctctc
     1201 gccccgagca gcgctgctgg cagcgacccg tgacgcggct cgcgcgctcg gcggagagcc
     1261 ggctcgtcgg ctcgggacaa tcgaggccgg ccgttatgcc gacctggtgc ttctcagtaa
     1321 gagcccgctc agcgacatcg agaacctcga gtcggttgag tggatcatga agggtggtca
     1381 gatctggcgg ccgggacagc ttaggagtgg gattgcgatg aaataggcgg ggaagcgggg
     1441 aagaccacta gggtaactgg aggggctgaa gcagaggtca gggttcggcc ccttcgtgtt
     1501 gctcggagtg ccgccactaa tagtctaggc aacctacttc cccgcttccc cgcttccccg
     1561 cttccccgcc tccatcggta gatcgactcg ctcggcccac tcggtccacg accccacgta
     1621 gatccgtacc cgcggatatc ccagcaaata gcgcaacgtg aagtggacgt ggctcgcttc
     1681 aatcgcgctg ttgcaataga cgattatgtc cttgtctggc gtaatcccct gcatggcata
     1741 ttcggcgcgc agctccgccg gactcttcca cacgtggccg aagccttcct gggtgagatc
     1801 gttctgccag tagtggttga tggctccggg aatgtgccct ctccgcatct gagcccccgc
     1861 ctggccggca tactgatccg caggccttgc gtccaccagg gtggcatcgc cggtggtgat
     1921 cgagcgccgc acgtcatcca gggacgcctg ctcggggtga aaggggccgg cgggaaacct
     1981 ggttgcggcg actcgggggt attggggaat cactgcccgc tgttccagct gccacttgaa
     2041 gtaaccgccg ttcagcacgt acaccttggg atggccgaac ccggcaagca gccaggccag
     2101 aaacgtggca tcgatgttac gggtctcccc tgcgctatag atgacgaccg gctgatcgaa
     2161 gctcagcccg agccggccaa agagctcggc atacgctcgt tgcgagagca gctgcgccgg
     2221 gatgccaccg ccgcttgcac gcaggctttc gatgttgagg tacagcgcac cgggcaggtg
     2281 atccttcaga taggtaaaca ggtctgctct cacatccacg gcgcgaaccg gcccccgttg
     2341 ctgccaccgg gcaagctcct cggtcgacac gagccgcggc agtgttgttt ccgctgccgg
     2401 cgcgggttcc agccgcgacg tggtgtggcc cgcgcaggcg ccgacccatc ccagcatgag
     2461 ccccgcaacg atgcgcaatg gcctcactgc accgaatcca gtcccatgta tagtctctcc
     2521 tcttccaggt acactctcac tgcattccgc cgccgcctgg aattgaatga gaccggccgg
     2581 gtctcgtcgg ccggcggcag cgacgcgagc gcgcgcccca ttggccgccc cgactcgatg
     2641 gcagacttca tatcttggcg gagcccgatg atgtagccgc gggtacgcgc taccagcgct
     2701 cccggccgtg cgggaatcgc tccgtgaccc gggacgaccg tcctgggccg tagagtgtcg
     2761 attccccgga gggctcgcag cagctcgctc gaactgccgt ccacaaccat ggtgactcca
     2821 tcctcgacga gcagatcgcc cgcgaacaag atccgctcgc gagggagcca caccgtcagg
     2881 tctcccgcgg agtgcgcggc gcccggatga gtgatgacga cggtacgtcc gccaagacgg
     2941 agcgtatctg ctccagtcac cggccggtcc ggcgtattgg caaactcgaa tccacgcatc
     3001 gcatcaagcc ccaccaccct gacccaatcc gccagcaagg catccggccc gccatcagac
     3061 gccagactgc tccgatcggg gtgggcgatg accctcgcgc cgagccggcg aaagacaatc
     3121 gcgccgaaat ggtggtcggg atggtggtgg gtcaggataa gccatttgat gggcttatta
     3181 gtaacagcgt ggatcgtgac gaccagcgct tcgccatcgc gtgggctggc cagggcatcg
     3241 accacgatca caccatcgcc ggtcacgatg aagccggcat tgggccggcc ctccgagccg
     3301 cggccggtat cgccgagcac ggcgtacacc ccctcggcga gtcggcgcag cggaagcggg
     3361 gtcgattccc ggggcttgcc ctgcacggca ggagtcgcgg ccgcgaggcc ggagaggatc
     3421 aggacaaaga ggaaggtgct ggggagaaac acgggaccgc cgccgacggg ccgccgcatc
     3481 cgatagggcc gcgggtccgg atcaggctga cgcgaagctg atgccgaccg actgcttgaa
     3541 ggcagccccc ttgttgtcgg tccagaccat ggtcagggga gcctccttat cggccttcac
     3601 ggtgaaggtc accaccggat cccggctgat cccggacgtc cactcgaacc gggccacctc
     3661 ctgctcccca taagtgacga caacttcttt gatgaaatac gccggaatgg gctcgccatc
     3721 ggcatttcgg aagaatccgg tgtccatcgg atgggagatg atcgagttca ccacgatcac
     3781 ttctccgcga gttatccggt cgggaacctt gatccgggct tcaccgatat ggttggtcat
     3841 catccgcacc cgttgagcgt aaccagcacc cgcgcgtagc cggcccatac ttcaccggtg
     3901 ttggtctcta gaatggcccg tacccaggtg gtgcgcttca tcttgatgcg cgtcgagatc
     3961 gatacctggc ccagcgccgg tgtgaggtga aacgccgcga gatgtgcatc ggggttatgg
     4021 tcgacaatga gatgcacgcc cttgacgtaa tgcgccttcg acatcggcag atcgctctcg
     4081 atgatcacgg gcacaactcg gccgtcctcg gccatggcag gcatgtcgag cgagacatgg
     4141 ccccgctgga tcggccggtc gccgaacagg cttttcagaa tgcgggcgac ctcttcgttg
     4201 gggacctccg ggtcttccgg acctcggaga ggagttgctc ccagcagtcc gtcggaacga
     4261 gagacggcac cggagaccag caggccggcg acacccatgg cacatgaacg caggaaggag
     4321 cggcgggaat cggtaaagtc tgacatcgag ttcaagctcg gcagttgact ggtccaagtc
     4381 aagccgaaca catccgaacc gcacaacatg taacgactta taaaaatcat cccttcgcgt
     4441 tcatggggcg agggtatcga gtactgcgcg gggtctcgcg acacataggt cgatcgagcg
     4501 gccaccggtt cacggcagcc gagtaacccg atgcctgggt cacgtccgca ccacttcaac
     4561 cgacgccact gccgtcgccc agctgaacag accgagcaaa attctgcacc tggataaggg
     4621 ggcgctcaaa agtaatccgg agctctcccg ggtcaccggc gcaacccttg ctccagggca
     4681 ggctttcggg gtgcggtagc ggccggtatt tccggcttgt gcccctcccc tggcatcact
     4741 actttaagcc tttcggcgac atagcgatgt ggggattttt accttcctct ccgtgccgag
     4801 ggaccgtgga tacccaagag cttcaagaag tcgcgctgtt cgagaagtgc cggcagttca
     4861 ccaaagcgcg cgagttgcag gccatcggcc tctatccgta cttcaatccg atttccgaat
     4921 cggaggacac cgtcgtagtc attgacggtc agaagcggat catgcttggg tcgaataact
     4981 acctcggcct gacccatcat cccaaggttc tggaggccgc gtcgcgagcc ctcagccgct
     5041 acggatcggg gtgcaccggc agccggttcc tgaacggcac cctggacctg cacgagcagc
     5101 ttgagaactc tctggccgaa tttctgggga aggaagcctg cctcgtcttc tcgaccggct
     5161 actcggccaa cctcggcctg atctcgggcc tggtcggacg cggggatgtc gtctacctgg
     5221 acaagctcga cca
//
LOCUS       DASYRV010000363         2655 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_144341, whole genome shotgun sequence.
ACCESSION   DASYRV010000363 DASYRV010000000
VERSION     DASYRV010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2655
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144341"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..818
                     /locus_tag="VGQ24_09620"
     CDS             <1..818
                     /locus_tag="VGQ24_09620"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: protein motif:HMM:NF013222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEV8455138.1"
                     /translation="DEHWDQTVTLDQLGRVVHLSPYHLQRTFKRLLGVTPKAYASARR
                     MERMKSRLREGDTVSRATYEAGYGSGSRAYEHARSSMGMTPGTYRNGGRGMRVRYTIV
                     STEAGHLLTAATDRGLCAVMLGDGAEPLESSLRREYPAAVLERDDARLREYTQIVVDQ
                     LSGSGNPVGLPLDVAGSAFQWQVWEALRRIPVGETRSYRDIAQELGRPTAARAVGRAC
                     ASNRLALVIPCHRAVRENGELGGYRWGVDRKRRLLEQERTGRDSHKGAAMTAS"
     gene            845..1264
                     /locus_tag="VGQ24_09625"
     CDS             845..1264
                     /locus_tag="VGQ24_09625"
                     /inference="COORDINATES: protein motif:HMM:NF014688.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HEV8455139.1"
                     /translation="MPSLDTLIPRFKAADRQTRLETLLDYSKKLPPLPERYEAEKQQG
                     HNRVHECQTPVYLWVEVDQGRVHIHADVPRESPTVRGFISLLARSLDNQTPEAVAQLP
                     DDLLDQLGLSETLGMTRTQGLTAILNRIKRSVATAAA"
     gene            1264..2382
                     /gene="rho"
                     /locus_tag="VGQ24_09630"
     CDS             1264..2382
                     /gene="rho"
                     /locus_tag="VGQ24_09630"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF006886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEV8455140.1"
                     /translation="MLGVLEIAGKGGGFLRRREASYLPSQGDVHVGERLVRQYGLRTG
                     DEIDGTIRQGSKGRGPTLETITAIHGRPPESLGERPEFSRLAAVHPNEQLLLEAGSPG
                     AGQPDFTNRVIDLLCPLGKGQRALIVAPAKAGKTMVLTAIAQGISANHPGADLFILLV
                     DERPEEVFEMEAAGVGEVVASSFDNPAQRHVALAELTLERARRRVELGDDVVLIVDSL
                     TRLARAYNTVEKGTGRTLSGGLDAQSLEKPKRFLGSARRIDPAQGGGSMTIIATALVD
                     TGSKMDQVIFEEFKGTGNSELVLSRELAERRIYPAIDLVASSTRREELLLPDEALAAS
                     RVLRERFAGMTPINAMNDLLTDLRRNRTNAELIRSLAA"
     gene            complement(2363..>2655)
                     /locus_tag="VGQ24_09635"
     CDS             complement(2363..>2655)
                     /locus_tag="VGQ24_09635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455141.1"
                     /translation="YEFIDNSDFFRGTVQPDSRSRMNVCFRAPTEELEAKFISEATKR
                     GLDGLKGHRSAGGMRASIYNACPRRAVEALVAFMKEFERANRGVGAAKQPVT"
BASE COUNT          491 a          874 c          877 g          413 t
ORIGIN      
        1 tcgatgagca ctgggaccag accgttacac tggaccagct tggccgagtc gtccacctga
       61 gcccctacca cctccagcgc acgttcaagc gactgctcgg cgtgactccc aaggcgtatg
      121 cgagcgcccg gcgaatggaa cgaatgaaat cgcgactccg ggaaggagac acggtgagcc
      181 gggcgaccta cgaggctggc tatggatccg gcagccgtgc ctacgagcac gcccgctcaa
      241 gcatggggat gacgccgggc acctaccgga acggcggtcg gggcatgcgg gtccggtaca
      301 ctattgtatc caccgaggcg ggacacttgc tgacggccgc cactgatcgc ggtctgtgcg
      361 ccgtgatgct gggagacgga gccgaaccgc tcgagtcctc cctccgccgt gagtacccgg
      421 cggccgtcct cgagcgggat gacgccaggc tgcgggagta cacccagatt gtggtggacc
      481 agctcagtgg ctcgggcaat ccggtcggac ttccgcttga tgtcgctggg tccgccttcc
      541 agtggcaggt gtgggaagcg ctgcggcgga tcccggttgg agagacccgc tcgtatcggg
      601 atattgccca ggagctgggc cgccccaccg ctgcgcgggc agtgggccgc gcctgcgcca
      661 gcaaccgtct agccctcgtg atcccctgcc accgagcagt gcgggagaac ggcgaattgg
      721 gcggataccg ctggggagtg gaccggaagc gccgactact tgagcaggaa cggaccggga
      781 gggatagcca caaaggcgcc gccatgacag cttcctagga ggccctactt cgagcgtctg
      841 ccccatgccg tccctggata ctctcatacc ccgcttcaag gcagccgatc ggcaaacccg
      901 gctcgagacg ctcctcgact actccaagaa gctgcctcca ctcccggagc gctacgaagc
      961 cgaaaaacag cagggccaca atcgggtgca cgagtgccag accccggtct atctctgggt
     1021 cgaggtggac caggggcggg tccacatcca cgccgatgtg cctcgcgaat cgcctaccgt
     1081 gcgggggttc atttccctgc tcgcgcggag cctcgacaat cagacgcccg aagccgtggc
     1141 gcagctgccc gacgacctgc tcgaccagct cggcctgagt gagacactcg gcatgacccg
     1201 cacgcaggga ctcaccgcca tcctgaatcg cataaagcgc tcggtcgcta cggccgcagc
     1261 ctgatgctcg gcgtcctcga gatcgccggg aagggaggtg gcttcctgcg ccggcgcgag
     1321 gcgagttact tgccgtctca gggggacgtg catgtggggg agcggctcgt tcgccagtac
     1381 gggcttcgca ccggagatga gatcgacggc acgatacgcc agggatcgaa gggcagaggt
     1441 ccgactctgg aaacgatcac ggccatacac ggaaggccgc cggagtccct cggagagcgg
     1501 ccggaattca gccgccttgc cgcggtgcac ccgaacgagc agctgctcct cgaggcagga
     1561 agcccgggtg ccggacagcc ggacttcacc aatcgggtca tcgacctgct ctgtcctctc
     1621 ggcaagggcc agcgcgctct catcgtcgcc ccggccaagg cggggaagac gatggtgctc
     1681 accgccatcg cccagggcat cagcgcgaac catcccggag ccgacctctt catcctgctg
     1741 gtggatgagc ggccggaaga ggtattcgag atggaggcgg ccggggttgg tgaggtagtg
     1801 gcctcgagct tcgacaaccc ggcccagcga catgtcgccc tggccgagct gacgctggag
     1861 cgggctcgcc ggcgggtcga gctgggcgat gacgtcgtgc tcatcgtgga ctcgctcacc
     1921 cggctggccc gagcctacaa caccgtcgag aagggcaccg gtcgcaccct ctccggcggg
     1981 ctggatgcac agtccctgga gaagccgaag cggtttctcg gcagtgcccg ccgcatcgac
     2041 ccggcccaag gtggcggatc gatgaccatc attgccaccg ccctggtgga caccggaagc
     2101 aagatggatc aggtgatctt cgaggagttc aaaggcaccg gcaacagcga gctggtgctg
     2161 agtcgggaat tggccgaacg gcggatctat cccgccatag acctggtggc gagctccacc
     2221 cgaagggagg agctgttact cccggacgag gcgctcgccg catcgagagt gctgcgcgag
     2281 cggtttgccg gcatgacacc gatcaatgcg atgaacgacc tgctgaccga ccttcgccgc
     2341 aacagaacca acgccgagct gatcaggtca ctggctgctt agcggccccg accccccgat
     2401 tggcccgctc gaactccttc atgaacgcca ccagcgcctc gaccgctcgc cggggacacg
     2461 cgttgtagat gctggcccgc ataccgcccg ccgagcggtg ccccttcagg ccatccaggc
     2521 cgcgcttggt ggcctcggag atgaattttg cttccagctc ctccgtggga gcgcggaaac
     2581 agacattcat ccgggagcgg ctgtcaggct gaacggtacc ccggaagaaa tcgctgttat
     2641 cgatgaactc gtaga
//
LOCUS       DASYRV010000364         2004 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3812694, whole genome shotgun sequence.
ACCESSION   DASYRV010000364 DASYRV010000000
VERSION     DASYRV010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2004
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3812694"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1629)
                     /locus_tag="VGQ24_09640"
     CDS             complement(<1..1629)
                     /locus_tag="VGQ24_09640"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HEV8455142.1"
                     /translation="MDPNVFETANAGFAQAMYEEFLRDPSAVGPEWRRLFESGIVGER
                     NGAGQDSGAAGRVPSGRVGGQSTSPSSQAPMQAPTSPLSTPPLSTAPLPSRPGAQPIK
                     GPAAKLVANMTESLTVPTATTFRELPVAVLEERRRGLNASLQAAGRPEKISFTHLIAY
                     ALVQATKQMPVMGHSLVLIEGVPHRAQPEGIALGLAVDVQRKDGSRGLVVPVIKRADT
                     MDFAGFHAAYEALVEKARSNKLMPDDFAGATMSLTNPGGLGTSASVPRLMAGQGSIIA
                     VGAIGYPAEFATAPAERVAELGLSKVMTVTSTYDHRIIQGAESGAFLAVVDRLLQGEE
                     GFYELIAESLELSSASYRVAKAAPRPQAVPETVPPEMMYHVAAAMALVKAFRMHGHLA
                     ARLDPLGTEPIGDPALDPNGLGLTPDIMAAIPSRVLRIAVPGRTLAESLPYLQATYCG
                     TMAYEIEHISTHEERVWLRGKIESGAYRQPMTPDEQRKLLQRLTEVETLEKFLHKAYL
                     GQKRFSIEGVDMLVPMLDLTIESAAEGGARDVVIG"
BASE COUNT          315 a          680 c          673 g          336 t
ORIGIN      
        1 gccgatcacg acatcgcggg cgccgccctc ggccgcgctc tcgatcgtga ggtcgagcat
       61 cggcaccagc atgtcgacgc cttcaatcga gaaccgcttt tggcccagat aggccttgtg
      121 caggaacttc tcgagcgtct cgacctcggt gagccgctgg agcagtttcc gctgctcgtc
      181 tggcgtcatc ggctggcggt aggcgccgct ctcgatcttc ccgcggagcc atacacgctc
      241 ctcatgggtc gagatgtgct cgatctcgta cgccatggtt ccacagtaag tggcctggag
      301 ataaggcagc gattcagcca gcgtgcggcc cggaacggcg atccggagca cccgtgaggg
      361 gattgccgcc atgatgtccg gggtaagccc gagcccgttc ggatccagag ccgggtcgcc
      421 gatcggctcg gtgcccaggg gatcgagccg ggccgccagg tggccatgca ttctgaacgc
      481 cttcaccagc gccattgccg cggccacgtg gtacatcatc tcaggcggta cggtctcggg
      541 taccgcctgc ggccgtggcg ccgccttggc cactctataa ctcgccgagg atagctcgag
      601 gctctcggcg atcagctcgt agaacccctc ctcaccctga agcagccggt cgacgactgc
      661 caggaacgcc cccgattcgg ctccctggat gatgcgatgg tcgtaggtgc tggtaacggt
      721 catgaccttg ctgaggccga gctcggccac gcgctcggcg ggagcggtgg caaactccgc
      781 cggatagccg atcgcgccta cggcgatgat gctcccctgg ccggccatga gacgaggcac
      841 cgatgcggac gtgccgagtc cgccggggtt ggtgagcgac atggttgccc cggcgaagtc
      901 gtcgggcatc agcttgttgc tacgcgcctt ctccaccaga gcttcgtagg cggcgtgaaa
      961 gccggcgaag tccatcgtat cggcgcgctt gattaccggg accaccagac cgcgactccc
     1021 gtccttgcgc tgcacgtcga ccgccaggcc gagcgcgatg ccctcgggct gcgctcgatg
     1081 gggcacgccc tcgatcagca ccagcgagtg gcccatcacc ggcatctgct tcgtggcctg
     1141 gaccagtgcg taggcgatca ggtgggtaaa cgagatcttt tcgggtcgac cggcagcctg
     1201 gagggaggca ttcagcccgc ggcggcgctc ctcgagcacg gccaccggga gctcgcggaa
     1261 ggtcgtcgcg gtggggaccg tgaggctttc cgtcatgttg gcgacgagct tggccgcggg
     1321 gcccttgatc ggctgggcgc cggggcggct gggcagcggg gcagtgctca gcgggggagt
     1381 gctcagcggg ctcgtgggag cctgcatggg cgcctgggag ctcggtgacg tgctttggcc
     1441 gcccacccgc ccagagggca cccgccccgc tgccccgctg tcctgccccg ctccattccg
     1501 ctcgcccacg atcccactct cgaacagacg gcgccactcg ggcccgacgg cggacgggtc
     1561 cctcaggaac tcctcataca tggcctgcgc gaaacccgcg ttggccgtct cgaacacgtt
     1621 tggatccacg ctcatatcct gactggggtg cgtgccggtc tcggttccgg cgcaccggaa
     1681 ttccagcgga cgtcaggtgc cggacaggga cacaggaaga taacggctcg aaccaccgct
     1741 gcgcagaatc gggcagccag cttgccagtc gtaactccag ccgtatagta gagaagggca
     1801 cctcacccga ccgcgtctcc cggaggccca gtatgccccg gcaccctcgc acattgtgcg
     1861 tgccgttgtg gttggcggcc gccatcctcg ccctaggctg cggcggcggt gggggcgatg
     1921 ccggaactcc gccttcgacc accgcgatcg ccaaggccgc cacgaatagt ggcgatgcac
     1981 agaacgggac agtcgggcaa ccgc
//
LOCUS       DASYRV010000365         7990 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3812797, whole genome shotgun sequence.
ACCESSION   DASYRV010000365 DASYRV010000000
VERSION     DASYRV010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7990
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3812797"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..241
                     /locus_tag="VGQ24_09645"
     CDS             <1..241
                     /locus_tag="VGQ24_09645"
                     /inference="COORDINATES: protein motif:HMM:NF020250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SAF domain-containing protein"
                     /protein_id="HEV8455143.1"
                     /translation="VKKVYPSEQGPILKMSKKLVAARDLPTGHVLGPEDVALKSPGDG
                     LPPHMLEVVVGRTLLCPLKADDAIQLAALGQGEAA"
     gene            238..1041
                     /locus_tag="VGQ24_09650"
     CDS             238..1041
                     /locus_tag="VGQ24_09650"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEV8455144.1"
                     /translation="MTAGPLAERVAVVTGALGRLGPIWCEALLDAGASVGGIDLEESP
                     MAPAFRSLQDRNAARLRLYRADVRDRKSLEAARAQCEVDLGVPAVLVNNAGIDQPPGP
                     AKCYRIQDIPDDVFRGVLDVNLVGAFHAAQTFGPAMVDLGRGSIINIGSLYASVSPDA
                     RAYDHLPSDPPFLKPPAYGASKAALVNLTRYLSTHWGPSGVRVNTLSPGGVEGGQDEA
                     FKRKFVARVPLARMAVARDLGGPLIFLASDASSYVTGIELLVDGGYTAW"
     gene            1059..2534
                     /locus_tag="VGQ24_09655"
     CDS             1059..2534
                     /locus_tag="VGQ24_09655"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEV8455145.1"
                     /translation="MGKIDLAPPPLILNYVDGTERPAAAGECFAKLAPATGRSLCSVA
                     RSRAVDVDAAVDAARRAWPAWAAATPVHRGDLLRELALALREHQDEVARLVHVETGKS
                     LKDARGETAGAVEMGFFVAGEGRRFYGRTTTSAVPNKAAMTVRQPLGVAGLIIAANTP
                     IANVAWKVFPALLCGNTVVLKPSEDAPAAAWAFARLAARIGLPPGVFNLIHGLGEEAG
                     APLVASYGVDVISFTGSTSVGRWIQQTAGARLAKICLELGGKNPLIVCDDADLEVAAN
                     WAVLSAFSNAGQRCASGSRIIVFDKVYEEFRDLLVERTRRLRVGCGDDDDFGPVINQQ
                     QLESMLQAVATARHKGTRVLIGGHRLTGPGYDGGFFMAPTLLEGAHTDPLSQTELFGP
                     ISSLYRVADFESAIALANDSPYGLTAAIHTADVHRAMAFTSRIRAGVAVVNGGTYGSE
                     PHMPFGGLRASGNGWREAGTEALDVYSDWKTVYINYTPTRV"
     gene            2565..3347
                     /locus_tag="VGQ24_09660"
     CDS             2565..3347
                     /locus_tag="VGQ24_09660"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: protein motif:HMM:NF014409.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acylneuraminate cytidylyltransferase family
                     protein"
                     /protein_id="HEV8455146.1"
                     /translation="MNASVSIVALIPARAGSKRLHGKNVRPLAGHPLIAYTIAAARES
                     GVFAAVIVSTDSPVTADIARHYGAEVPFLRPAELAADLSPDIDWVRHALGQLRQEGRT
                     YSCFSILRPTSPFRSGATIRRAWDRFGARPDVDSLRAVELCRQHPGKMWRLQGDRMVP
                     LLDGGPVNPPWHSMAYQALPEVFVQNASLEIAWTRVPIEEGTIAGTVVAPFLTEGYEG
                     MDLNDARDWWYAEHLVSSGAACLPAPAVPPYVPAAGALPGLP"
     gene            3352..5256
                     /locus_tag="VGQ24_09665"
     CDS             3352..5256
                     /locus_tag="VGQ24_09665"
                     /inference="COORDINATES: protein motif:HMM:NF012670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HEV8455147.1"
                     /translation="MPDLHYVPPKEFERLRRLPLKPADRAALFATCCRINALYMIAQA
                     GSGHIGSSFSSLDIVSWLYLNELQPDDLYFSSKGHDAPGLYAVLLGLGLIPFEQIHRL
                     RRLGGLPGHPDVATPGIVTNTGPLGMGISKAKGMAFAHRAQGRTNRLFVLTGDGELQE
                     GQIWESLAGAARSSLGEITVIVDHNKIQSDTWVRDVGDLGDLEAKFRVFGWKVARCDG
                     HDFSALAATLRRLRRTSDRPKVLIADTVKGKGVSFIESAAMKTGERFYRFHSGAPDDD
                     SYTRALQELAEHAAAQLAVLRAPPLALETRPRADRPSASGAQRLIPAYSRALLAEADR
                     NPRLVALDADLELDCGLIAFRERFPERYLECGIAEQDMVSQAGGMALRGMLPVVHSFA
                     CFLSTRANEQIYNNATERTKIVYVGSLAGLLPSGPGHSHQSVRDISALASVPGLVLLE
                     PSCEQEVALAVEYCMRGTTESCYLRLVSVPIHIPYQLRADYRLVEGRGVALTGGEDAI
                     LFAYGPVLLAQAYEAAERLREDRGFGLSVINLPWLNRVDDSWLLDTIGDYRQVFTLDD
                     HYVAFGQGQMLAAHIAALRPSGVVVRQLGLDALPVCGQNAEALVAHELDAASLARQVL
                     AVVERERQRA"
     gene            5253..5945
                     /locus_tag="VGQ24_09670"
     CDS             5253..5945
                     /locus_tag="VGQ24_09670"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEV8455148.1"
                     /translation="MTTVLFWDIDGTLLTTARAGIRAWEEGMAERLGQSVDLSEFQTA
                     GLTDVEIARRLAATYGVGPTGVDGLLRSYERRLPECLGRRTGAVLPNVLPILERLRGR
                     SDVHSALLTGNTRSGAAAKLRHYGLARFFEGGAFADGAHDRASIAQTALGQARQIVGT
                     VSPEQVYVIGDTPHDVACGRAIGARVVAVATGGYTLEQLRVTEPWWLLPSLPDPDQFL
                     ARLGLSPSLESV"
     gene            5942..7702
                     /locus_tag="VGQ24_09675"
     CDS             5942..7702
                     /locus_tag="VGQ24_09675"
                     /inference="COORDINATES: protein motif:HMM:NF017011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455149.1"
                     /translation="MIRIRELLRDQLRRVPTLERHARLLARRRRLATEQPDWTAIIGP
                     VRPAWDQALAAARGGPRVLVATSVGSHLAGTSLESALAAALTLRGAEVEVLLCDSMLP
                     GCLAADVTWYPDQSRFARHGPAKDLCYGCFESGAAVFRALGIRVRTYGEHLANDDRKL
                     AARLAVEIPLAEIADYTLDGIAVGEHALAGALRFYARAALDGEPEAEAVLRRYFGAAL
                     LTSFATRALLREVPYEVAVFHHGIYVPQGLIGECCRQAGVRVVNWNPAYRKQCFIFSH
                     GDTYHHTLLAEPTESWERMRWSKQLEAGLLEYLESRWHGTQDWIWFHDRPMADLQRIA
                     HEVGADFSKPCVGLLTNVMWDAQLHYPANAFPNMLEWVVSTIEWFARRPDLQLIIRVH
                     PAELRGSLVSRQPIVAEIRKRFPTLPPNVFIIGPESQVSTYAVMSRCNAVLIYGTKTG
                     VELTSMGIPVIVAGEAWIRNKGLTMDADTAAAYFALLERLPLSAGMSEAQVERARRYA
                     FHFFFRRMIPLEFMQPSKDDVPYRVELGSFRELGPGRSRGLDVICDGILFNRPFTYPA
                     ETETSAEDAAAKILASTPAR"
     gene            7699..>7990
                     /locus_tag="VGQ24_09680"
     CDS             7699..>7990
                     /locus_tag="VGQ24_09680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455150.1"
                     /translation="MINGNVVQVASDLLKSAWYRARGGRPFTTGYGAYKEGQVRRVLD
                     RGEFHLDRLPNGFGLNLDERIVEYPGLLALLPPGPGLLLDAGSALNFRFLLSR"
BASE COUNT         1270 a         2686 c         2624 g         1410 t
ORIGIN      
        1 agtgaaaaag gtgtatccca gcgagcaagg gcccatcctc aagatgagca agaagctcgt
       61 tgccgcgcgt gacctgccca cgggccacgt cctcggaccc gaagatgtcg ccctcaaatc
      121 acccggagat gggctgccgc cgcacatgtt ggaggtcgtc gtcggccgca ccctgctctg
      181 tccactgaag gccgacgacg cgatccagct cgccgcactg ggccagggcg aggcagcatg
      241 accgctggtc cgctcgccga gcgcgtcgcg gttgtcaccg gcgcactcgg ccgactcggg
      301 ccgatctggt gcgaggcgct gctggatgcc ggtgcctcag ttggtgggat cgacctcgag
      361 gagtctccga tggctccagc gtttcgctcc ttgcaggatc ggaacgcggc gcgtctccgg
      421 ctctaccgtg ccgacgtccg ggaccgcaag tcgctcgaag cagctcgggc tcagtgcgag
      481 gtggacctgg gggtccccgc ggtgctcgtc aacaacgccg ggatcgatca gccgccgggg
      541 cctgccaaat gctatcggat ccaggatatt cccgacgacg tcttccgcgg tgtgctggac
      601 gtcaacctgg taggcgcatt tcacgccgcg cagacattcg gtccggccat ggtggacctc
      661 ggccggggct ctatcatcaa tatcgggtcg ctctacgcca gcgtctctcc cgatgcccgg
      721 gcctacgatc acctccccag cgaccctcca tttctgaagc cgccggccta cggcgcatcc
      781 aaggccgcgt tggtcaatct cacccgctat ctctccactc attgggggcc gtcgggagtc
      841 cgagtgaaca ccctctcccc cggcggagta gaaggcggac aggacgaagc cttcaagcga
      901 aagtttgtcg cccgagttcc gctggcccgc atggccgtgg cccgggacct cggcggcccg
      961 cttatcttcc ttgcatccga cgcctcgtcc tatgtgaccg gcatcgagct tctggtcgac
     1021 ggtggctaca cggcctggta aggagattcg acgcgcgcat gggcaaaatc gatctcgccc
     1081 ctcccccact catcctcaac tatgtggatg gcaccgagcg accggctgcc gccggtgaat
     1141 gctttgccaa gctggcgccg gcaaccggcc gctccctgtg ctcggtggct cgctcccgcg
     1201 ccgtggacgt agatgccgct gtcgatgccg cgcgcagagc ctggcccgcc tgggctgccg
     1261 caacgccggt acatcgcggc gacctgcttc gcgagctcgc gctcgccctc cgcgaacacc
     1321 aggatgaggt cgcgcgcctg gtccatgtcg agaccggcaa gtcactcaag gacgcccggg
     1381 gcgagaccgc cggcgcggtc gagatggggt tcttcgtggc cggcgagggg cggcgattct
     1441 atgggcgcac taccacgagt gcggtgccca acaaagcggc catgaccgtc cgccaacccc
     1501 ttggcgtggc aggcttgatc atcgcggcaa acaccccgat cgcgaacgta gcctggaagg
     1561 tcttccctgc actcctctgt ggtaacacgg tggtcttgaa gccatcggaa gacgcgcccg
     1621 ccgcggcctg ggccttcgct cgcctggcgg caaggatagg actcccgccc ggggtgttca
     1681 atctgatcca tggcctggga gaagaggcgg gagcaccgct ggtagcatcg tacggcgtgg
     1741 acgtgatcag cttcaccggg tccaccagcg tgggacgctg gattcagcag accgccggtg
     1801 cccgcctggc caagatctgt ctcgagctgg gggggaagaa tcccctgatc gtgtgcgacg
     1861 atgcggatct cgaggttgcg gccaactggg cggtgctgtc ggccttcagc aacgccggcc
     1921 agcgctgcgc gtccggcagc cggatcatcg tgttcgataa ggtttacgag gagtttcgcg
     1981 atcttttggt cgagcgtacc aggcgtctcc gagtgggttg tggcgacgat gacgatttcg
     2041 gccctgtcat caaccagcaa cagctcgaga gcatgctcca ggcagttgcg actgcacgcc
     2101 acaaaggcac cagggtgctg atcggtggcc accgcctcac tgggcccggc tacgatggcg
     2161 gcttcttcat ggcgccgacc ctactcgagg gagcgcacac cgacccactc tcacaaaccg
     2221 agctgttcgg cccgatctcc tcgctctacc gcgtggccga tttcgagagc gccatcgctt
     2281 tggcgaacga ctcgccctac gggctcaccg cggccattca cacggcggac gtccatcggg
     2341 ccatggcctt caccagccgg attcgcgccg gggtggccgt ggtgaacggg ggcacctacg
     2401 gtagtgagcc acatatgccg ttcggcgggc tcagggcgtc cggcaacggc tggcgcgagg
     2461 cggggaccga ggcattggac gtgtactcag actggaagac ggtatacatc aactacacac
     2521 cgacgcgggt gtagtgctgt cgcccccatg cccggttccc accgttgaac gccagcgtct
     2581 ccatcgtcgc cctgattcct gcccgtgccg gatcgaagcg gctgcacgga aagaacgtgc
     2641 gcccgctcgc cggccatcca ctcatcgcgt acaccattgc ggcggcgcgt gaaagcggcg
     2701 tgttcgccgc cgtgatcgtc tccaccgatt cccctgtcac tgccgatatc gctcgccact
     2761 atggggccga ggtgccgttc ctgcgcccgg ccgagcttgc ggcggatctg tcaccggata
     2821 tcgattgggt gcggcatgcg ttgggacaac tgcggcaaga gggccgcacc tactcctgct
     2881 tcagcattct ccgacccacc agcccgtttc gcagcggcgc cactatccgc cgggcatggg
     2941 acaggttcgg tgcccggccc gacgtcgact cgctgcgggc agtggagctg tgccgccagc
     3001 atcccggcaa gatgtggcgc ctccagggtg atcggatggt gccactgctg gacggcggcc
     3061 cggtgaatcc tccgtggcac agcatggcct accaggctct ccccgaagtg ttcgtccaga
     3121 atgccagcct cgagatcgcc tggacccgag ttccgatcga ggagggcacc atcgccggca
     3181 cggtggtggc accgttcctg accgagggct acgaggggat ggacctcaac gatgcccgcg
     3241 actggtggta cgccgagcat ctcgtctcga gcggagcggc ctgcctgccc gcccctgcag
     3301 tccctcccta cgttccggcg gcgggcgctc ttccgggctt gccctgagcg catgccagac
     3361 ctgcactacg ttcccccgaa ggagttcgag cgcctgcggc ggctgcccct gaagccggcg
     3421 gaccgggcgg cgctattcgc gacctgctgc cgcatcaacg cgctctacat gatcgcccag
     3481 gcgggatccg ggcacattgg gagcagcttc tccagcctcg acatcgtctc ctggctgtac
     3541 ctcaacgagc tgcaaccgga cgatctttac ttttcctcca agggacacga tgccccgggc
     3601 ctgtacgccg tcctcctcgg ccttggtctc atccctttcg agcagatcca tcggctgcgg
     3661 cgcctcggcg ggttgcccgg ccaccccgac gtggcgactc cgggaatcgt caccaacacg
     3721 ggcccactgg gcatggggat ctccaaggca aaggggatgg cattcgccca ccgggcgcag
     3781 ggcagaacga atcggctctt cgtcctcacc ggtgacggcg agctgcaaga aggccagatt
     3841 tgggaatcgt tggcgggcgc ggctcgcagt agcctgggcg agatcacggt gatcgtggat
     3901 cacaacaaga tccagtcgga cacctgggtc cgggatgtcg gcgatttggg tgatctcgag
     3961 gcaaagttcc gagtctttgg ctggaaggtg gcgcgctgtg acggacacga tttctcggcg
     4021 ctcgccgcaa ccctgcgccg cctgcgtcgc accagcgatc ggcccaaggt cctgatcgcc
     4081 gacacagtca aagggaaagg cgtctcgttc atcgaaagtg ccgccatgaa aaccggcgag
     4141 cgcttctacc gatttcacag cggcgctccc gacgacgaca gctacacccg ggcactccag
     4201 gagctcgccg agcatgcagc ggcccagctc gccgtgttgc gggcgccgcc gttggcgctc
     4261 gagacccggc cgcgcgccga tcgtcccagc gcatcggggg cgcagcgcct gataccggct
     4321 tactcgcgtg cccttctggc cgaggcggac cggaacccca ggctggtggc cctcgacgct
     4381 gacctcgagc tggactgcgg gctcatcgcc ttcagagagc gcttccccga gcgatacctg
     4441 gagtgcggga ttgccgagca ggacatggtt tcccaggcgg gtggaatggc gctccggggc
     4501 atgctcccgg tggtccactc atttgcctgc tttctttcca cccgagccaa cgagcagatc
     4561 tacaacaacg cgactgagcg caccaagatc gtgtacgtcg gctcgctcgc gggcctgctg
     4621 cccagcggac ccggccactc gcaccagtcg gtccgcgaca tctcggcgct ggcgagcgtt
     4681 cccgggctcg tcctgctgga gccgtcgtgc gaacaagaag tggcgctcgc ggtcgagtac
     4741 tgcatgcggg gcacaacgga gagctgttat ctccggctgg tgtccgttcc cattcacatt
     4801 ccctaccagc tgcgggccga ctaccgtctg gtggagggcc ggggagtagc acttaccgga
     4861 ggcgaggacg cgattctgtt cgcctacggc cctgtattgc tggcacaagc gtatgaggcg
     4921 gccgaacggc tgcgcgagga tcgggggttc gggctcagcg tgatcaatct cccctggctg
     4981 aatcgggtcg acgactcctg gctgctcgac acgataggcg actaccggca ggtcttcacc
     5041 ctcgacgacc actacgtcgc gttcgggcag ggacagatgc tcgccgccca catcgccgcc
     5101 ctccgaccct cgggagtggt ggtacgccaa ctcgggctgg acgcactgcc ggtgtgcggg
     5161 cagaacgccg aagccctggt ggcccatgag ctcgatgcgg ccagcctggc ccggcaggtg
     5221 ttggccgtgg tggagcgcga gcggcagcgg gcatgaccac cgtcctgttc tgggacatcg
     5281 atggcacgct gcttactacg gcccgggcgg ggattcgcgc gtgggaggag ggaatggcag
     5341 agcgcctggg gcagtcggtg gacctctctg aattccagac tgccggcctt accgacgtcg
     5401 agatcgcgcg ccggctcgct gcgacgtatg gggtcggtcc gaccggagtg gacggcctgc
     5461 tgcggagtta cgagcggcgc ctgccggagt gcctggggcg gcggaccggc gcggtgctcc
     5521 ccaacgtgtt gcccatcctg gagcggctac gtggcagatc cgacgtccac tcggcgctgc
     5581 tcacgggcaa cacccggagt ggagccgcgg ccaaacttcg gcactatggc ctcgccagat
     5641 ttttcgaggg tggcgccttc gccgacgggg cccatgaccg ggccagtatc gcccagaccg
     5701 cattgggcca ggcacggcag atcgtcggta cggtttcgcc tgaacaggtc tacgtgatcg
     5761 gggacacccc tcacgacgtc gcgtgcggca gggcgatcgg cgcgcgggtg gtcgctgtcg
     5821 ccaccggcgg ctacactctg gagcagctac gagtgaccga accgtggtgg ctcctgccct
     5881 cgcttccgga tccggaccag ttcctggctc ggctcggtct gtcgccctca ctggagtccg
     5941 tatgatccgc attcgggagc tgcttcggga tcagctccgc cgcgtgccga cactcgaacg
     6001 tcacgcgcgg ttgctggccc gccgtcgacg cctggcaacc gagcagccgg actggacggc
     6061 tatcataggc ccggtccgcc ccgcatggga ccaggcgctc gcggcagccc gcggcggccc
     6121 cagggtcctc gtggccacga gcgtggggag tcatctcgcc ggcacctcgc tggagagcgc
     6181 gctggccgcg gcactgacgt tgcgcggggc cgaggtcgag gtcctcctct gcgactcgat
     6241 gctgcccggg tgtctggcag ccgatgtgac ctggtatccc gaccagagcc ggtttgcccg
     6301 tcacgggccg gccaaggacc tctgctacgg atgcttcgag tcgggagccg ccgtgtttcg
     6361 cgctctggga attcgagtgc gtacgtacgg ggagcacctc gctaacgacg accgcaagct
     6421 tgccgcgcgt ctggcggtcg agatcccgct ggctgagatc gctgactata ccctcgacgg
     6481 cattgccgta ggagagcacg cgctggcagg cgcgttacgg ttctacgccc gtgccgcact
     6541 ggacggtgag cctgaggccg aagcagttct gcgccgctac ttcggtgcgg ccctgctgac
     6601 gtccttcgcc acccgggcgc tcctgcgcga ggtaccctac gaggtggccg tgtttcacca
     6661 cggtatctac gtaccgcagg ggctgattgg cgagtgctgc cgccaggcgg gcgtgcgggt
     6721 cgtgaactgg aatcctgcct atcgcaagca gtgtttcatc ttcagccacg gcgacactta
     6781 ccatcatacg ctgctggcgg agccgaccga gagctgggaa cgcatgcggt ggtccaagca
     6841 gctggaggcc ggtctgctcg agtacctgga gagccgctgg cacgggaccc aggactggat
     6901 ctggtttcac gaccggccga tggctgacct ccaacggatc gcccacgagg tgggcgcgga
     6961 cttctccaag ccctgcgtcg gcctgcttac caacgtgatg tgggacgcgc agctgcacta
     7021 tccggccaac gccttcccca acatgctgga atgggtggta tcgaccattg agtggttcgc
     7081 ccggcggccc gatctgcagt tgatcatccg ggtgcatccg gcggagctca ggggcagcct
     7141 ggtctcgcgt cagccgatcg tggcggagat ccgcaaacgc tttccgacgc tccccccaaa
     7201 cgtgttcatc atcgggcccg aaagccaggt gagcacgtac gccgtgatgt cccgctgcaa
     7261 cgcggttctg atctatggca ccaagacggg ggtcgagctc accagcatgg ggatacccgt
     7321 catcgtcgca ggcgaggcct ggatccggaa taagggtcta acgatggacg cggacaccgc
     7381 ggcggcctac ttcgcgctgc tggagcggct gccgctttcg gcaggcatgt ccgaggcaca
     7441 ggtggagcgc gcgcggcgat acgcctttca cttcttcttt cggcgcatga tccccctcga
     7501 gttcatgcag ccgagcaagg atgacgtgcc ctaccgggtt gagctgggat cctttcgcga
     7561 gctcgggccc ggccggagcc ggggattgga cgtcatctgt gacggaatac tcttcaaccg
     7621 gccgttcacc tatccggccg agaccgagac cagcgccgaa gacgccgcgg ccaagatcct
     7681 ggcctccaca ccggcacgat gatcaacggc aacgttgtgc aggtcgcttc agacctcctg
     7741 aaatcggcct ggtaccgggc tcgcggcggc cgtcccttca ctactggcta cggcgcatat
     7801 aaggaagggc aggtccgcag ggtgctcgat cggggggagt tccatctcga ccgcctgccg
     7861 aacggctttg gtctcaacct ggacgagcgt atcgtcgagt atcccgggct cctcgctctt
     7921 ctgccgcccg gccctggact cctcctcgac gcggggtcgg ccctgaactt tcgctttctc
     7981 ttgagccgtc
//
LOCUS       DASYRV010000366         2837 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1597895, whole genome shotgun sequence.
ACCESSION   DASYRV010000366 DASYRV010000000
VERSION     DASYRV010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2837
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1597895"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(62..268)
                     /locus_tag="VGQ24_09685"
     CDS             complement(62..268)
                     /locus_tag="VGQ24_09685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455151.1"
                     /translation="MSDLAHNLALGPVILVPASAAGAQWWAVYERLDRGAVIHGRYLG
                     LLVGVPGEPAETTLERAAALAAGG"
     gene            complement(261..1664)
                     /locus_tag="VGQ24_09690"
     CDS             complement(261..1664)
                     /locus_tag="VGQ24_09690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455152.1"
                     /translation="MSHIRVREFDLRDLGTAFKAAEVDAAALAAVNQHTLEPVAADEV
                     TIRQMDVCHDQYDRTLERFPVEYLQRFAETLPGKGLMAGHQTRGALPLGKFHSAEVVS
                     RMQDHPIFVQPGGKSLAVEPVPGFETKRRKVNVLSAGFYYPKDAASEPMDARIRQGVY
                     NSVSIGFSYADINCDVCKKSYFSDCPHWAGYPAERDNPDSPLVTLTYSGTAEEIQRHV
                     EAVETSIVYLGAQPNARIRKAYEMCADGAVDVRALCSTPYGIDEVALKVAEGLARQFG
                     SKQRVWGFSSGGKSSVVSGTPADLERFFGALTGGHPDAAEDEVMLEKLRKMFGLADDA
                     DEAACLKALETSRADQDGSAEKLAAVEKRALDLEAQVKALEPVAEIGRKALARTVKSI
                     LDDDFRLTGTAENAELALITEHLSEQRDYEKLMKLADAKAAAVLAKFPAGTSGDTSIR
                     DEDEQAPKQAARDAAFV"
     gene            complement(1780..2184)
                     /locus_tag="VGQ24_09695"
     CDS             complement(1780..2184)
                     /locus_tag="VGQ24_09695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455153.1"
                     /translation="MIRTVQAWERDETGARARHRITTPQLYNFGREIWWVGPTWKPVW
                     IGEDERFGPDLRVTGRVDLLRRQHQIARVDGWRWITWAMWRMLAWGEDRMWTTIHWML
                     NRGWLDGSRLEQGRAYRPWEMVLKSLRLPRRG"
     gene            complement(2181..2366)
                     /locus_tag="VGQ24_09700"
     CDS             complement(2181..2366)
                     /locus_tag="VGQ24_09700"
                     /inference="COORDINATES: protein motif:HMM:NF021566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2292 domain-containing protein"
                     /protein_id="HEV8455154.1"
                     /translation="MSQPLRLPQTAAEREWDEVLDLARQVGQAIDHGEVKITIQDGRP
                     IQFTDTRQSRDFGRRRR"
     gene            complement(2363..2593)
                     /locus_tag="VGQ24_09705"
     CDS             complement(2363..2593)
                     /locus_tag="VGQ24_09705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455155.1"
                     /translation="MSRKYWPAEKLSRLQSGEQWGNWLENTGANLAISFKLALRDGPG
                     SECQHLEGIRETLLTMEAAVEELRTTMNKVLK"
     gene            complement(2590..2748)
                     /locus_tag="VGQ24_09710"
     CDS             complement(2590..2748)
                     /locus_tag="VGQ24_09710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455156.1"
                     /translation="MTPKPRFDLIPPEHVHLVACPKCGRQHESTVGKVVCPCGQVILI
                     HGPKRGTK"
BASE COUNT          467 a         1026 c          804 g          540 t
ORIGIN      
        1 tgcatcagga ccaactccgg tcctcgctcc ccaatcattg ccctcgatgg atgcgccatc
       61 cctagcctcc tgccgcaagt gcggcggccc gttccaacgt cgtctctgcc ggctcacccg
      121 gcaccccaac taaaagcccc agataccggc cgtggatcac cgccccacgg tccaaccgct
      181 catacactgc ccaccactgc gcgcccgccg cggacgccgg aaccaggatc accggcccga
      241 gcgcgaggtt gtgcgccaga tcagacaaag gccgcgtccc gcgctgcctg cttcggagcc
      301 tgctcgtcct cgtcccggat gctggtgtcc ccactcgtgc cggccgggaa cttggcgagg
      361 accgccgccg ccttcgcgtc cgcgagcttc atcagcttct cgtagtcgcg ctgttcggag
      421 aggtgctcgg tgatgagcgc cagttccgcg ttctcggcgg tgcccgtcag gcggaagtcg
      481 tcatcgagga tggacttcac cgtccgcgcg agcgccttcc ggccgatctc cgccaccggc
      541 tccagcgctt tcacctgggc ttccagatcg agagcccgct tctcgacggc tgcgagtttc
      601 tctgcggagc cgtcctggtc ggcccggctg gtctccagcg ccttcaggca cgcggcctcg
      661 tcggcgtcgt cggccaggcc gaacatcttg cgaagcttct ccaacatcac ttcatcctcc
      721 gcggcgtccg ggtgaccgcc tgtcaatgcg ccgaaaaacc gttcaagatc cgccggggtc
      781 ccgcttacaa cagaagactt gccgcccgaa gagaaccccc acactcgctg cttgctgccg
      841 aactggcgag cgagcccttc cgcgaccttg agcgcgacct catcaatgcc gtaaggcgtc
      901 gagcagagcg ctcgcacatc caccgcccca tccgcgcaca tctcgtaggc cttgcggatg
      961 cgggcattcg gctgcgcgcc gaggtagacg atgctcgtct ctaccgcctc aacgtgacgc
     1021 tggatctcct cggccgtgcc gctgtaggtc agcgtgacca gcggcgagtc gggattgtcg
     1081 cgttccgccg gatagcctgc ccaatgcgga caatccgaga agtacgactt cttgcacaca
     1141 tcgcagttga tgtccgcgta ggagaagccg atcgaaactg agttgtaaac gccctgccgg
     1201 atgcgggcgt ccatcggctc cgaggccgcg tccttcgggt agtagaagcc tgccgagagg
     1261 acattgacct tccgccgctt ggtctcgaag ccgggcaccg gctccaccgc aagcgacttt
     1321 ccacccggct ggacgaagat cgggtgatcc tgcatccggc tcaccacctc ggcggagtgg
     1381 aacttgccga gcggcagcgc cccgcgcgtc tggtggcccg ccatcagccc cttgccgggg
     1441 agcgtctccg cgaaccgctg gagatactcg actgggaacc gctctagcgt ccggtcgtac
     1501 tggtcgtggc acacatccat ctgccggatg gtgacctcgt ccgccgcgac cggctcgagg
     1561 gtgtgctggt tcaccgccgc gagcgccgcc gcgtcaacct cggccgcttt gaacgcggtc
     1621 cccaggtctc gcaggtcgaa ttcgcggaca cggatgtggg acattggctc ccagaaatgc
     1681 aaaaaggcca ggcacccata agggcacccg gcctgccgtt cgacggctca gacggttcta
     1741 gatcctattc taacacgcta gatcacattc ctgcccactt cacccgcggc gtggcagacg
     1801 aaggctcttg agcaccatct cccacggccg atacgcgcga ccctgttcga gcctgctccc
     1861 gtccagccaa ccacggttga gcatccagtg gatagtggtc cacatccgat cctcgcccca
     1921 agcgagcatt cgccacatag cccaggtgat ccaccgccac ccatcaaccc tcgcaatctg
     1981 atgctgccgg cgaagcagat caacccgacc ggtaacccgc aggtcagggc caaaccgttc
     2041 atcctcaccg atccatacag gcttccacgt cggcccgacc caccagatct ctctgccgaa
     2101 attgtagagt tgaggagtgg tgatccgatg gcgcgcccgc gcgccagtct cgtcgcgctc
     2161 ccaggcctgg actgtcctga tcatcgtctc ctcctcccga agtcgcgtga ctgccgggtg
     2221 tccgtaaact ggatcggccg gccgtcctgg atggtgatct tcacctcgcc gtggtctatc
     2281 gcctgcccga cctgccgcgc cagatcgagc acctcatccc actcccgctc ggcggcggtc
     2341 tgcggcagac ggagcggctg gctcacttca gcaccttatt catcgtggtc cgcagttctt
     2401 ccacggcagc ttccatcgtc aagagcgttt ctcggatgcc ttccaagtgt tggcactccg
     2461 atcctggacc gtcacgcagt gcgagcttga atgagatcgc tagattggcg ccggtgttct
     2521 ccagccagtt accccactgc tcgcctgact gcaatcgcga gagtttctct gctggccagt
     2581 atttccggct cacttcgtcc ctcgcttcgg cccgtggatc aggatcacct gcccgcacgg
     2641 acacacgacc ttgccgaccg tgctctcgtg ctgccgcccg cacttgggac acgccacgag
     2701 gtgcacgtgc tccgggggga tgagatcgaa ccgcggtttc ggtgtcatag gttatcgccc
     2761 caccacgcct tctgttcttc tgcggtccaa tgctgatacc ggatgcgttc ttccggcatc
     2821 cctcttgcgc ggtactc
//
LOCUS       DASYRV010000367         4687 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2223219, whole genome shotgun sequence.
ACCESSION   DASYRV010000367 DASYRV010000000
VERSION     DASYRV010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4687
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2223219"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..447
                     /locus_tag="VGQ24_09715"
     CDS             <1..447
                     /locus_tag="VGQ24_09715"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEV8455157.1"
                     /translation="KFSVAPMPAGPGGSHTAAIGGAQLAINRRTEHPEAAWAVIDYLT
                     RPEQMRERARVVGQFPTRPGLYDDPDLASGLLIPPATIRRIIDFAVPRPVTPVYTQLS
                     EILQINLHRALTRQTGPAAALAQAQAEMQRLLNRAGLGTGEPVARR"
     gene            434..1351
                     /locus_tag="VGQ24_09720"
     CDS             434..1351
                     /locus_tag="VGQ24_09720"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEV8455158.1"
                     /translation="MPGADRLSGIEQQEARLAWQLVLPALVTILLVALFPLFWTLWES
                     LHLHDLRMPWLGKPFIGVDNYVEAFRDPRFWSALGHTGFFALTSVGLELIIGLGLALA
                     LNRAFRGRGLVRAAVLIPWAIPTVVSALLWRFMFEGESGIVNTALVSLGVVREPIVWF
                     IQPVAAWVPVILADVWKTTPFVALLLLAGLQNIDASLYEAARIDGASAWRQFRHVTLP
                     LLKPAILVALIFRTLDAFRVFDLIYALTGGGPGTSTEPIALYTFNALLQNLQFGYGSS
                     LSIIVFVVTFSLALLYIRFLGAELTGAKR"
     gene            1354..2166
                     /locus_tag="VGQ24_09725"
     CDS             1354..2166
                     /locus_tag="VGQ24_09725"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEV8455159.1"
                     /translation="MRKWWPTLVLALLVLASAFPLYWAVLASFTPEARLFQAPSLLPR
                     ELVLDHYRALFTERNFWIPIRNSLIVAGTTTAFCVTIGALCAYALARLQFRGKVVLLG
                     FILAVGMFPQISVVSPLYLLLRSLHLINTYPGLVLPYLTFAMPLTIWLMVGFFRQLPA
                     ELEEAAMVDGASRFRAFREVIIPLALPGIATTAILTFVYSWNEFLFALSFTLGPDRQT
                     VPVAIALFRGMYQVPWGQILAAAVVATAPVTLLVLAFQRRIVQGLTAGAVKG"
     gene            2169..3194
                     /locus_tag="VGQ24_09730"
     CDS             2169..3194
                     /locus_tag="VGQ24_09730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016292962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEV8455160.1"
                     /translation="MASVRLEGVGKTYPNGHVAAQGLDLEIGDGEFMVLVGPSGCGKS
                     TALRMIAGLETPTIGRILIGDKDVTALPPQDRDIAMVFQTYALYPHMTVRQNLAFGLR
                     MRRAGRDVIDRRVEEAARALALEPVLARKPAQLSGGQRQRVALGRAIVREPKVFLFDE
                     PLSNLDAKLRVETRAELARLHRRLGATVVYVTHDQEEAMTLGSRVAVMRDGFLQQVAP
                     PMELYRRPANRFVAGFVGSPGMNFLPAEVMPAATRKAGAMMGIRPHDVAIVPRGAGDL
                     DAWVDVVEPRGSELLVYLRLGTSGDGAELRVVAPPEPAIEAEQVVAVRFDQGRLHWFD
                     SETGRRV"
     gene            complement(3208..>4687)
                     /locus_tag="VGQ24_09735"
     CDS             complement(3208..>4687)
                     /locus_tag="VGQ24_09735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455161.1"
                     /translation="NFATYFGRDMMMTALMMRPIWSPDMAEHVIASVLRKLGPRGDVS
                     HEEALGGQAIRENAVVYDSLVSGYFRARGSNRTRTADSLLSQAREILRDLRKTRENYH
                     MLDDEFQLPVLEANYLTDSAVSPERKRAFLLGSEPGGTRLALMLREMALVASLAQPYT
                     RSPRAMNLVSFPKRDATHWRSASWRDSDAGYAGGRFAMDINVIWVPRALRSIDTILGV
                     LPSLGITPPMLDSLIADTSGALAGYVRDRSSLSRGIETWNGARRHFKVSLAPTEIRRR
                     TAAKLAWLPAPERRYWRKVLAERGEVNDSLTFLVLSLDAGGRPIAVVNTDPATELFLN
                     PELKPKEALEEVAPFLRPYPVGLFVEGLGPLVANDAYAARQIWERFQSDQYHGPRVAW
                     GREVNLLFLGLANQISAAAEVAQHIDVPVRAVGIEELEDALHRTLVAVNASGLQHNEL
                     WSYQIRGEKLVPIRYGTSSDVQLWNMTNLVVQYVLSKLPAMN"
BASE COUNT          751 a         1521 c         1492 g          923 t
ORIGIN      
        1 aaattctcgg tggcgccgat gccggccggt ccgggagggt cacacaccgc ggccatcggc
       61 ggggcgcaat tggcgatcaa ccgacgcacc gagcaccccg aggccgcctg ggcggtgatc
      121 gactatctca cccggccgga acagatgcgc gaacgcgcgc gcgtggtagg gcagtttcct
      181 acccgtccag gcctctacga cgatcccgac ctcgcctctg gactcctcat cccccccgcg
      241 acgatccgtc ggatcatcga ctttgccgtc ccgaggccgg ttactccggt ctacacccag
      301 ctctccgaga ttctccagat taacctccac cgcgcactca cgcgccaaac gggtcctgct
      361 gccgcgctgg cccaggccca ggccgagatg cagcgtctgt tgaaccgcgc tgggctgggt
      421 acgggagagc cggttgcccg gcgctgaccg gctgtccggg atcgagcagc aggaggctcg
      481 actcgcctgg cagctcgttc tccccgcact cgtcaccatc cttctcgtcg ctctctttcc
      541 gcttttctgg actctctggg aatcgctgca cctgcacgac cttcgaatgc cctggttggg
      601 taagccattc attggggtcg acaactatgt cgaggcgttt agagaccctc ggttttggag
      661 cgcgctcggg cacaccgggt ttttcgccct gaccagcgtg ggcctcgagc tgatcatcgg
      721 cctcggactc gcgttggcgc tgaaccgcgc ttttcgggga cgcggactgg tgcgtgccgc
      781 ggtgctgatc ccctgggcaa tcccgaccgt ggtttccgcg ctgctgtggc ggtttatgtt
      841 cgagggtgag agcggtatcg tgaacaccgc actcgtaagc ctcggagtgg ttcgggagcc
      901 gatcgtctgg tttatccagc cggtggccgc atgggtgccg gtaattttgg cagacgtttg
      961 gaagacgaca ccgttcgtcg cgctcctgct actcgccggg ctgcaaaata tcgacgcttc
     1021 gctgtacgaa gccgcccgaa tcgatggtgc gtcggcctgg cgtcaattcc ggcatgtgac
     1081 gctcccgctg ctgaagcccg cgatcctggt ggcgctcatc ttccgcacct tggacgcgtt
     1141 ccgggtcttc gatctcattt acgcgctgac cgggggcggc ccgggcacgt ccaccgagcc
     1201 gattgccttg tacaccttta acgcgctatt gcaaaacctg cagttcggat atggatcgtc
     1261 cctgtcgatc atcgtatttg tagtgacctt cagcctggcc ctgctgtaca tcagattcct
     1321 cggcgcggag ctcaccggag ccaagcggtg agcatgcgaa agtggtggcc caccctggtg
     1381 ctcgccctgc tggtgctcgc cagcgcgttt cccctctact gggcggtcct cgcctcattc
     1441 acaccggagg ctcggctctt tcaggctccg tctttactcc cgcgagagct ggtgctcgat
     1501 cattatcggg cgctgttcac cgagcgaaac ttctggattc ccattcgcaa ctcgctcatc
     1561 gtggccggca ccacgacggc cttctgcgtg acgatcgggg cgctgtgcgc gtatgccctc
     1621 gcccggctcc agttccgcgg caaggtcgtc ctcctgggat tcattctggc cgttgggatg
     1681 ttccctcaga tttcggttgt gtccccgctg tatctgctgc tccgctcgct acacctgatc
     1741 aatacctatc cgggcctggt gcttccctat ctcaccttcg caatgccgct cacgatctgg
     1801 ctcatggtgg gattctttcg ccagttgccc gccgagctgg aggaagccgc aatggtcgac
     1861 ggcgccagcc ggttccgcgc gtttcgtgag gtgatcatac cgctcgccct tcccggcatc
     1921 gccacgaccg cgattctcac cttcgtgtac agctggaatg agtttctctt cgcgctctcg
     1981 ttcaccctcg gcccggaccg gcagacggtg ccggtcgcga tcgccctctt ccgaggcatg
     2041 tatcaggtgc cgtggggcca gatcctggcc gccgccgtcg tcgccaccgc tcccgtgacg
     2101 ctgctcgtgc tcgccttcca acggcgaatc gtgcagggac tcacggcggg cgccgtgaaa
     2161 gggtagccat ggcttcggtc cggctcgaag gtgtggggaa gacctacccg aatggccatg
     2221 tggccgccca ggggctcgat ctggagatcg gcgacgggga attcatggtc ttggtggggc
     2281 catctggttg cggcaagagc acggccttgc ggatgatcgc cgggctggag acgccgacga
     2341 tcggacgcat cctgatcgga gacaaggacg tgacggccct gccgccgcag gaccgcgaca
     2401 tcgcgatggt cttccagacc tacgcgctct acccccacat gaccgtccgt cagaacctcg
     2461 ccttcggtct tcggatgagg agagcgggac gtgatgtcat cgatcgtaga gtcgaggagg
     2521 cggctcgcgc gcttgccctg gagccggtcc tcgcccgtaa gccggctcag ctctcgggcg
     2581 ggcagcgcca gcgggtggca ctcggccggg cgatcgtccg ggagccgaag gtgttcctgt
     2641 tcgacgagcc gctgtcgaac ctcgacgcca agctgcgggt ggagactcga gccgagctgg
     2701 cgcggctcca ccggcggctg ggggccacgg tggtctacgt gacccatgac caggaggagg
     2761 caatgacgtt ggggagccgg gtcgcggtca tgcgggacgg cttcctccag caggtggccc
     2821 cgccgatgga gctgtaccgc cggccggcta atcggttcgt cgcggggttc gtagggtcgc
     2881 cggggatgaa cttcctcccg gcggaagtta tgccggccgc aacgaggaaa gccggagcga
     2941 tgatgggcat ccggccgcac gacgtggcga tcgtcccccg cggagcgggc gacctggatg
     3001 cgtgggtcga tgtggtcgaa ccgcgaggga gcgagctact ggtatacctg cgactcggga
     3061 ccagcggtga cggggcggaa ctgcgggtgg tggcgccgcc ggaacccgcg atcgaggccg
     3121 agcaggtggt ggcggttcgg ttcgatcagg ggagactgca ttggttcgat tcagagactg
     3181 ggaggcgcgt gtaaggatga caccccttca attcatggct ggcagcttcg agagcacgta
     3241 ctgcacgaca agattggtca tattccagag ctgcacgtcc gagctggttc cgtagcggat
     3301 cggcaccagc ttctcccctc ttatttgata actccatagc tcgttgtgtt gcagtcccga
     3361 cgcattcacg gcaaccaagg tgcggtgcaa cgcgtcctcc agctcctcga ttccaacggc
     3421 gcgcaccggc acgtcgatgt gttgcgcaac ttcggcggcg gcggatatct ggttcgcgag
     3481 cccgaggaaa aggaggttga cctcgcgtcc ccaggccacg cggggtccgt ggtactggtc
     3541 gctttgaaat cgttcccaga tctggcgtgc agcgtaggca tcgttggcca ccagaggacc
     3601 gagtccttcc acgaacagtc ctacagggta gggacgcagg aatggggcaa cttcttcgag
     3661 cgcctccttc ggcttcaact ccggattcag gaatagctcg gtggccgggt cggtattgac
     3721 cacggcaatc ggccggccac cggcgtcgag tgagagtacc agaaaggtga gcgaatcatt
     3781 cacctcgccg cgctctgcca ggaccttccg ccagtagcgt cgctcgggcg ccgggagcca
     3841 cgccagcttc gcagcggttc ggcgccggat ttccgtcggc gcaagactca ccttgaaatg
     3901 acggcgggca ccattccatg tctcgatgcc tcggctcagc gacgagcggt cgcggacata
     3961 acctgcgaga gccccgctgg tgtccgcgat caggctgtcg agcatcggcg gcgtgatgcc
     4021 cagggacggc aggaccccca ggatcgtgtc tatggaccga agcgccctgg gtacccaaat
     4081 gacgttgatg tccatggcaa agcgtccgcc cgcatagccg gcgtcgctgt cccgccaact
     4141 ggcggatcgc cagtgggtcg catcgcgctt cggaaaactc accagattca tggctcgcgg
     4201 gctccgagtg tacggctggg ccagggacgc gaccagcgcc atctccctga gcatgagagc
     4261 caggcgagtc ccgcccggct ctgatccgag cagaaacgct cgctttctct ctggtgacac
     4321 cgccgaatcc gtgaggtaat tcgcctccag gaccggaagc tggaactcgt catccagcat
     4381 gtggtaattc tcccgggtct tccgcaggtc ccggaggatc tcacgggctt ggcttagcag
     4441 gctatccgcc gtccgagtgc ggttagatcc tcgggccctg aagtacccgg aaacgagtga
     4501 gtcgtaaacc accgcattct cgcgaatggc ctggccaccg agcgcctcct cgtggcttac
     4561 atctccccga ggtcctagct tccgcaacac gctggcgatc acgtgctccg ccatgtccgg
     4621 cgaccagatc ggccgcatca tgagcgccgt catcatcatg tcccgaccga agtaggtcgc
     4681 gaagttc
//
LOCUS       DASYRV010000368         3542 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1810039, whole genome shotgun sequence.
ACCESSION   DASYRV010000368 DASYRV010000000
VERSION     DASYRV010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3542
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1810039"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            211..999
                     /gene="pstB"
                     /locus_tag="VGQ24_09740"
     CDS             211..999
                     /gene="pstB"
                     /locus_tag="VGQ24_09740"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HEV8455162.1"
                     /translation="MHAPVTASSEARPRLVTDKLTAMFGKFTAVKGVSLAFPPNRVHA
                     LIGPSGSGKSTFLRTLNRMHELSEHGWITGRVLLDGDDIYAPRVNVMQLRRRVGMVFQ
                     RPTPFPTMSVYDNVAAGLRLNRRLPRAELDSVVERSLRQAALWDEVKDRLRASAMALS
                     GGQQQRLCLARTIAPAPDVILLDEPTASLDPQGTQRIEELLFELKRDFTIVIVTHNMQ
                     QAARVSDTTTFFYLGTKVETGPTRQIFTAPRNEQTEAYITGRFG"
     gene            996..1841
                     /gene="pstB"
                     /locus_tag="VGQ24_09745"
     CDS             996..1841
                     /gene="pstB"
                     /locus_tag="VGQ24_09745"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HEV8455163.1"
                     /translation="MTSTLRPGSFVPSPRPTLAPRPPSAPPGSRESPAIDVHGFSFSY
                     GSRQVLRNLTFAIDRKAVTAIIGPSGSGKSTFLRSINRLNDLIPGIRNQGDILVEGTS
                     VFAPGTDLVSLRQRVGMVFQRPNPFPKTIFDNVAYGPALNALATRRDLPDLVERCLRQ
                     AGLWDEVKDRLDEPGTSLSGGQQQRLCIARALGNQPEVLLMDEPCSALDPIATQKVEE
                     LIFELKQHYTIVIVTHNMQQAARVSDFTGFFDRGELIEFDETERLFTKPAHERTEAYI
                     TGRFG"
     gene            1838..2548
                     /gene="phoU"
                     /locus_tag="VGQ24_09750"
     CDS             1838..2548
                     /gene="phoU"
                     /locus_tag="VGQ24_09750"
                     /inference="COORDINATES: protein motif:HMM:TIGR02135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HEV8455164.1"
                     /translation="MSVDVHRHFHDELSHVKVRLLTMSGEAEAALGLAVEALLERDSE
                     KASRVIAGDRVIDAMEVEIEEQCINLLALQQPMARDLRMLTSALKIANDLERVGDHAV
                     NIAQSAERLNQSRPIAPEPEIVEMARLAREMLSDALEAFIRGDAAGGREVCRRDDKVD
                     ALHRSVFRILLTHMMEDPHTIGAGMELFLVSRNLERVADLATNIGEDVVFLVEGRSIK
                     HHAEDRGEARGRTARAGN"
     gene            2545..3450
                     /locus_tag="VGQ24_09755"
     CDS             2545..3450
                     /locus_tag="VGQ24_09755"
                     /inference="COORDINATES: protein motif:HMM:NF014587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA phosphatase family protein"
                     /protein_id="HEV8455165.1"
                     /translation="MTEPIERIAAIDVGSNTVLLLIAEHHPTAGLTIIAEAEDQPRLG
                     AGLSATGRLSQAAMARALETIARMRELCHAHRVSRIGAVATAAVREAENGEDFVLLVR
                     DLGIPLQAISPETEAALSYRSAAHHFPGAERTLVADIGGGSLELIGAVGGRIRLSRSL
                     PLGAVRLTELALPLSTLRDQIGRALDQMVPRREWVGSAVIGSGGTFASLAAMALAERG
                     ASGQPVHGVEMPATEVEDLLERLSGLSPEARRQVPGLRPERADIIVAGVAVAAELLDR
                     VKASSVRVNGYGLREGLLLEMAGIG"
BASE COUNT          607 a         1182 c         1168 g          585 t
ORIGIN      
        1 accagccgat ggctgccctg ccgctcacgg tcttcaccta cgcaaccggt ccttacgagg
       61 aatggcaccg gtacgcctgg gcggcggcac tggtgctcat tctcgtggtg ttcatcctga
      121 gcctcggcgc gcggctcgcg atcggcaggc gctttaccct caatggttga gcctgccctg
      181 agcgccccgc ccgagccccg caaggaaccg gtgcacgccc ccgtcacggc gagctcggag
      241 gctcgtccgc gcctggtcac cgacaagctc accgccatgt tcggaaagtt caccgcggtg
      301 aagggggtct cgctcgcgtt cccgcccaac cgggtacatg cgctgatcgg cccgtccggc
      361 agcggcaagt ctacctttct gcgaaccctc aaccggatgc acgagctgtc ggagcatggc
      421 tggatcaccg ggcgggtcct gctcgacggc gacgacatct acgcgccgcg ggtcaacgtg
      481 atgcagctcc gccgccgggt ggggatggtg ttccagcgac ccaccccgtt cccgaccatg
      541 tcggtgtacg acaacgtggc ggccggcctc cggctgaaca gacggcttcc ccgggccgag
      601 ctcgacagcg tggtcgagcg ctcgctccgc caggcggcgc tctgggacga ggtcaaggac
      661 cggctcaggg ccagcgcgat ggcgctctcc ggggggcagc aacaacggct gtgcctggcc
      721 cgtaccatcg cgcctgctcc agacgtgatc ctgttggacg agcctaccgc gtcgctcgac
      781 ccgcagggca cccagcgcat cgaagagttg ctcttcgagc tcaagcgtga cttcaccatc
      841 gtgatcgtga cccacaacat gcagcaggcc gctcgggtct cggacaccac gaccttcttc
      901 tatctgggta ccaaggtcga gaccggaccg acgcgccaga tcttcaccgc gcccaggaac
      961 gagcagaccg aagcgtacat caccggaagg ttcggatgac ctccactctt cgccccggct
     1021 cgttcgtccc gtcaccccgg cccaccctcg ctccgcgtcc gcccagtgcg ccgccgggga
     1081 gccgggagag tcctgccatc gatgtgcacg gcttcagctt ctcctacgga tcccgccagg
     1141 tgctgaggaa tctgaccttt gccatcgacc gcaaggcggt cactgctatc atcgggccgt
     1201 ccggctctgg caagtccacc ttccttcggt cgatcaaccg gctcaacgat ctcattcccg
     1261 gaatccgcaa ccagggagac atcctggtcg agggaacctc ggtcttcgcc ccgggaaccg
     1321 atctcgtgtc cctccgccag cgggtgggga tggtgtttca gcggcccaac ccgttcccca
     1381 agacgatctt cgacaacgtg gcctacgggc cggctttgaa cgcgctggcg accaggcggg
     1441 atctccccga tctggtcgag cgctgtctcc ggcaagcggg gttgtgggat gaggtgaaag
     1501 accgtctgga tgaaccgggg accagcctct ccggaggcca gcagcagcgg ctctgcatcg
     1561 cccgcgcgct cggcaaccag cccgaggtgc tcctgatgga cgagccctgc tcggcactgg
     1621 acccgatcgc cactcagaag gtggaggagc tcatcttcga gctgaagcag cactacacca
     1681 tcgtaatcgt cactcacaac atgcagcagg cggcgcgggt gtccgacttt accggcttct
     1741 tcgatcgtgg cgagctcatc gagttcgacg agaccgagcg gctcttcacc aagccggcgc
     1801 atgagcgtac cgaggcttac atcaccggga ggttcggatg agcgtggatg ttcatcgcca
     1861 ctttcacgac gagctgagcc atgtcaaggt ccgcctgctc accatgtcgg gcgaggccga
     1921 agcagcgctt gggctcgcgg tggaggcgct gctggagcgc gacagtgaga aggcgagccg
     1981 ggtgatcgcg ggggatcgcg tgatcgacgc catggaggtg gagatcgagg agcagtgcat
     2041 caaccttctg gcgctccagc agccgatggc ccgcgacctc cggatgctca cgtccgcgct
     2101 caagatcgcc aacgatctcg agcgggtggg ggatcacgcg gtcaacatcg cgcagtcggc
     2161 cgagcgactg aatcagagcc ggccgatcgc gccggagccc gagatcgtgg agatggcccg
     2221 gctggcgcgt gagatgctat cggacgcgct ggaggccttc atccggggag acgccgcggg
     2281 tggccgagag gtctgccgcc gggatgacaa ggtcgatgcc ctgcaccggt cggtcttccg
     2341 gatcctgctc acccacatga tggaagaccc tcataccatt ggcgccggga tggagctctt
     2401 cctggtgagc cgcaacctcg agcgggtcgc cgacctcgcg accaacatcg gagaagacgt
     2461 ggtgttcctc gtcgagggtc ggtccatcaa gcaccatgcg gaggatcggg gcgaggctcg
     2521 aggacgtacc gcccgcgcgg gaaattgacc gagccgatcg agcgcatcgc cgccattgac
     2581 gtcggctcca acaccgtcct gctcctcatc gccgagcacc accccaccgc agggcttacg
     2641 atcatagcag aagcggaaga ccagccacga ctcggagctg gcctctctgc caccgggcga
     2701 ctcagccagg ccgcgatggc acgcgcgctg gagacgatcg cgaggatgcg cgagctgtgc
     2761 cacgctcaca gggtgagccg aataggggca gtagccaccg cggccgtccg tgaggcggag
     2821 aacggcgagg acttcgtcct gctggtgcgg gacctgggca ttccactcca ggccatctca
     2881 cccgagaccg aagcggcatt gtcctaccga tccgccgccc atcactttcc cggcgccgag
     2941 cggacgctgg tggccgacat tggtggcggc agcctggagc tgatcggcgc cgttggtggc
     3001 cgcattcgtc tctctcgctc actgccgctg ggggccgtcc ggctcaccga gctcgccctt
     3061 cccttgtcaa ccctgcgcga ccagatcggt cgtgcgctcg atcagatggt gcccagacgg
     3121 gagtgggtgg ggtccgcggt catcggctcg ggaggaacgt tcgccagcct ggcggccatg
     3181 gcgttggcgg agcgtggcgc atccggtcaa ccggtccatg gggtcgagat gccggcgacg
     3241 gaggtcgagg acctgctcga gcggctgagc gggctgagcc ccgaagcgcg gcggcaggtg
     3301 cccgggctgc ggccggaacg agcggacatc atcgtcgcgg gggtcgccgt tgccgcggag
     3361 ctgctcgacc gggtgaaggc cagcagtgtc agggtgaacg gctacggcct gcgggaaggt
     3421 ttgttgctgg aaatggcggg tataggatga ttcaccacag agacacagag ggacacggag
     3481 ggatctccct ccaatcaaga tcgccaatcg cgctatcctg gcttcgtatc atttgaaaac
     3541 ta
//
LOCUS       DASYRV010000369         6245 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1810135, whole genome shotgun sequence.
ACCESSION   DASYRV010000369 DASYRV010000000
VERSION     DASYRV010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6245
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1810135"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            303..3773
                     /locus_tag="VGQ24_09760"
     CDS             303..3773
                     /locus_tag="VGQ24_09760"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HEV8455166.1"
                     /translation="MTGFSFRRTVLTGLGALALSAVIAAPVLAQNAVIRGTVTSQDRK
                     EPVAGANVVISALSISVLSSDRGAYVITIPAARIPTQPVQITARAIGFKSLLRTLTIQ
                     AGEQTADFTLQTDINRLEEVVVTGTLEGVERAKVPFSVGRLNAEDLPVPSIDPLRSLA
                     GKVPGLRIAATTGRPGTAPEILLRGPTSINGSGRGQEPLIIVDGVIVSHVGSIQELGG
                     LDIETVEVVKGAAGSSLYGTQAANGVITITTKRGGTGGDGIKFNARTEWGFSDFNSVD
                     YGIPINHPIMLDETGQRFCAIQISGSSNCSRSFDINKEMQRIHNVNADTLRTGLTPLN
                     AVLSLDALRNITQSAIFPGQYYNSLAQISRRQPTSLTAIDATGKIGTVGFYVSGQYTD
                     DPGAVKFFKGSSQRRARVNLDYSARSDLRFQVSTMFDNFYRDSRTGNIFGTLLRGQLP
                     GIDLLQRDTLGRLLVTRQNFRPTDNGNGFPLYVGENQINDLTTNRFLGSLGAKYFPKN
                     WVTVEANFGYDNRATNSNFITKKGFRTAGVSTATNNGNQTISNSRDEAINLTTAATFR
                     TKLTNDLGAKMRLSGSYDQEKFITSSGNGEVYLVKDIFQLSNLSANFANSSESLIIKN
                     AGFAAAVNLDFKDRYIFDGSARYDGSSLFGPGHRWAPFGRIAGVWIVSHEPFWKVGFM
                     DELRFRVSRGTAGSTPRFSAQYEVFNVSQTGITTGQAGNAALKPETTTEVELGTDFTL
                     FRRVGVEVTYASGSTKDQILPVDIPASVGYSSQWQNAGTLKNKTWELAVTVPIVNSKS
                     FYWQARGTWDRTRTYIDKLNVPAFTYSGGTSQGTGNFFFMTDDSRRSCLPGETGHLPG
                     EPGYGPGEARPDCTGRPLNRYGNIYGRVFFKSCNELHESLRSQCGDGKAYQVNDQGWL
                     VWVGEGNSWRDGVTKNLWQTRLPVAESPWGVELNWGHPIVDRPLRGQPGQGVGINQII
                     GNVFPDFRFTVSNDFSYKKLTLYALLDATIGNWINNQGEGWGLLSVSSAYFDQANTTV
                     ETAKPVGYSWRAGTESTGTGGFYDVLGPNNYVVEKGSFAKLRELSLSYKLGPIARVGD
                     WTVGVIGRNIATFTGYSGYDPEVGCGGRDGSGCGGSGSGPTGSGIINQTDAFSFPTLR
                     TWTFSLSTRF"
     gene            3786..5672
                     /locus_tag="VGQ24_09765"
     CDS             3786..5672
                     /locus_tag="VGQ24_09765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455167.1"
                     /translation="MIRSLIRSGAFAGLLALGACSFAVDNPNDPGFNAVKGTPADLQN
                     YLGTLYRRWHNALYGTTSTVWGMAAVMSFEDFSTLSNNCQGQRVGIPRVGNDNQVGNG
                     CNPDQSRVYNQHSETGRGAADILRRMDAGLTFGSDDIDNRNRAFAEFIRGVSLGYLAM
                     VYDSSGITSAADEVTSAGTAVGGELSHYSAVMDSALVALENAETAALAASGAAYPIPS
                     NWMFTTASLTQAYFVQIIKSYRARLRANVARYPNTAACQSANPSQTNCDEEVTAEDVD
                     WAKVVADAQGGITSDLNITTSTTTGPDMSWTNQWYSYGTWHQMTPFIVGMADKTGAYT
                     SWIATPLDTRGQGTPFFMQTDDQRFPQGADRTAQRADFTLAGVTGVATNPGCTNANTV
                     CKRYFRNRDVADPAASPSWGASQYDHSRFWSWRTSGSGTARNGPFPFFTLAELNGLEA
                     EGHIRLGNYAAAAALIDRTRATCGYGSVPAGCTLRAVGNGFNITWTPVGGGAAVSRPI
                     GGGLPPLSGVINDNTTPVPGGTACVPRIPVNASEAGGGTTTCGTLFEALKWEKRIEAA
                     YSAYATWYFDSRRWGDLVINTPVHWAPPYQDLQVRLRQGLQIYSVGGGTNPTGSAARS
                     GYGW"
     gene            5677..6147
                     /locus_tag="VGQ24_09770"
     CDS             5677..6147
                     /locus_tag="VGQ24_09770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455168.1"
                     /translation="MLGPLRRVGAALFGILLVACYTLQPVRGVQPQIGSRVAFDVNDV
                     GRLALAGTMGPEIAQVEGQLLEKENGSYLVAVSTVRLLRGTEQVWSGEQVRLQPEYLG
                     PAYERKFSLGRSIGFGLIGVGGFTAFFVTRSLLASGSEDDGSPPDTVITRRGRP"
BASE COUNT         1151 a         2082 c         1922 g         1090 t
ORIGIN      
        1 cgcggagggc tcgcggactt gtatgggacg tgctatactg ttttgcgaaa tcaaatccaa
       61 atcgatttta agaggcacgc caagcagacg agcatcgact cgtgtcattt cgatacgagt
      121 ggtaaatcgg ggctgtggcg aagtgacacg cacgaccgag tgctgatggt cgatcccatt
      181 gtgccgccag catataggat ctgagaccgg ctggcacgac ttgcgccatt agcagcctga
      241 tgcagtcacc atatctactg gcaatcgttg gtgggtccca ctcctcatcg aggattccga
      301 gcatgaccgg tttctcgttt cgtcggacgg tcctaaccgg acttggcgcg ctcgccctga
      361 gcgccgtcat agccgcgccg gttctggccc agaacgccgt gatccgcggt acggtgacgt
      421 cgcaagaccg gaaggagccg gttgcgggcg ccaatgtcgt catctcggcg ctcagcattt
      481 cggtgctgag ctccgatcgg ggcgcctacg tcatcacgat tcctgccgcg cgaatcccca
      541 cgcagcccgt acagatcacc gcccgggcca tcggcttcaa gtcccttctc cgcacgctga
      601 cgatccaggc cggggaacag acggccgact tcacccttca gaccgacatc aaccggctgg
      661 aggaagtggt cgtcaccggg acgctggaag gcgtggaacg ggccaaggtg cccttctcgg
      721 tggggcggct caatgcggag gacctcccgg tcccgtcgat tgatccgctc cggagtctgg
      781 cgggcaaggt gcccgggctc cggatcgccg cgaccactgg ccgccccggc actgccccag
      841 aaatcctgct gcgggggccc acctccatca atggcagtgg ccggggccag gagccgctga
      901 tcatcgtgga cggggtcatt gtctcccacg tcggcagcat ccaggagctg ggcggcctcg
      961 acatcgaaac cgtcgaggtg gtgaaagggg cggcggggtc ctccctgtat ggcacccagg
     1021 ccgcgaacgg ggtcatcacc attaccacca agcgcggcgg caccggcggg gacgggatca
     1081 aattcaacgc ccgcactgag tggggcttct ccgacttcaa cagcgtcgac tacgggatcc
     1141 cgatcaacca cccgatcatg ctggacgaga cggggcagcg cttctgcgcg attcagatct
     1201 ccgggtcctc gaattgctcc cgctcgttcg acatcaataa ggaaatgcag cggatccaca
     1261 atgtgaatgc cgacaccctg cggaccgggt tgactccttt gaatgcggtc ctcagcctgg
     1321 atgcgctgcg gaacatcacc cagtccgcga ttttcccggg ccagtactac aactcgctgg
     1381 cgcagatctc ccgccggcag ccgacctccc tgaccgccat cgacgcgacc ggcaagatcg
     1441 gaaccgtcgg cttctacgtg agcggccagt acaccgatga tccgggagcg gtcaagttct
     1501 tcaagggctc ctcccagcgg cgggcgcggg tcaacctcga ctacagcgcc cgctccgacc
     1561 tgaggttcca ggtcagcacc atgttcgaca acttctaccg ggacagccgt accggcaaca
     1621 tcttcggtac tctgttgcgg ggccagctcc ccggcatcga cctgctccag cgcgatacgc
     1681 tgggccggct cctggtcacc cgacagaact tccgccccac cgacaatgga aacggcttcc
     1741 cgctttacgt cggggagaac cagatcaacg accttacgac caaccggttc ctcggctccc
     1801 tcggggccaa gtacttcccc aagaactggg tcacggtcga ggccaacttc ggctacgaca
     1861 accgcgcgac gaacagcaac ttcatcacca agaaggggtt ccggaccgcc ggtgtttcga
     1921 ccgcaaccaa caatggcaac cagaccatca gcaacagccg ggacgaagcc atcaacctga
     1981 ccaccgccgc aaccttccgg accaagctga ccaatgatct cggcgcgaag atgcggcttt
     2041 ccggctccta cgaccaggaa aagttcatta ccagctccgg caatggcgag gtctatctgg
     2101 tgaaggacat ctttcagctc agcaatctgt ccgccaactt cgcaaatagc tccgagagcc
     2161 tgatcatcaa gaacgcgggc ttcgccgcgg cagtaaacct cgacttcaaa gaccgctaca
     2221 tcttcgatgg ctccgcgagg tacgacggca gctcgctgtt cggccccggc catcgctggg
     2281 cgcctttcgg ccggatcgcc ggcgtctgga tcgtgtcgca cgagcccttc tggaaggtcg
     2341 ggttcatgga tgagctgcgc ttccgtgttt cgcgaggcac tgcgggctcc actccgcgct
     2401 tcagtgcaca gtacgaagtg ttcaacgtca gccagaccgg gatcaccacc ggccaggcgg
     2461 gcaacgcggc gctcaagccg gagaccacga ccgaggtcga gctcggcacc gacttcaccc
     2521 tgttccgccg ggtcggcgtc gaagtgacct acgcctcggg cagcaccaag gaccagatcc
     2581 tcccggtcga tattccggcc tcggtcggct attcgagcca gtggcagaac gcgggtaccc
     2641 tgaagaacaa gacctgggag ctcgccgtga cggttccgat cgtgaacagc aagagcttct
     2701 actggcaggc ccggggcact tgggaccgga cccggaccta tatcgataag ctcaacgtgc
     2761 cggcctttac ctacagcggc ggcaccagcc agggcaccgg caacttcttc ttcatgaccg
     2821 acgacagccg ccggtcctgc ctccccggcg aaaccggcca cctgcccggc gagccgggct
     2881 acggccccgg cgaagcccgc cctgactgca cagggcgtcc gctcaaccgc tacggcaaca
     2941 tctacggacg ggtgttcttc aagagctgca acgagctcca cgagagcctg cgctcccagt
     3001 gcggcgatgg caaagcgtat caggtcaacg atcagggctg gctggtgtgg gtgggtgagg
     3061 ggaattcctg gcgcgatggc gtcaccaaga acctctggca gacccggctc ccggtcgctg
     3121 aatctccttg gggcgtcgag ctcaactggg ggcatccgat tgtcgaccgg ccccttagag
     3181 gtcagccggg tcagggcgtc gggatcaacc agatcatcgg caacgtgttc ccggatttcc
     3241 gcttcaccgt ttccaatgac ttctcctata agaagctgac cctctacgcc ctgctcgatg
     3301 ccaccatcgg caactggatc aacaaccagg gtgagggctg gggtctgctg tcggtgagct
     3361 ccgcctactt cgaccaagcc aacacgaccg tcgagaccgc caagccggtg ggatattcgt
     3421 ggcgggcggg aacggagagc accggaaccg gcgggttcta tgacgtgctc ggcccgaaca
     3481 actacgtggt cgagaagggt tccttcgcga agctccgtga actgagcctc agctacaagc
     3541 tgggcccgat cgcccgggtg ggcgactgga ccgtgggggt cattggccgg aacatcgcca
     3601 cctttaccgg ctattccggc tacgatcctg aagtcggctg cggcggccgc gatggcagcg
     3661 gctgcggtgg cagcggcagt ggcccgaccg ggtccggcat catcaaccag accgatgcgt
     3721 tcagcttccc gacgctgcgc acctggacgt tctcactctc cacgcgcttc taggagccgg
     3781 ctttcatgat ccgatccctg atccgatccg gcgcgttcgc gggtctcctt gccctcggcg
     3841 cgtgcagttt cgcggtcgac aaccccaacg atccggggtt caatgccgtg aagggtacgc
     3901 cggccgacct gcagaactac ctcggtacgc tgtaccgcag gtggcacaac gcgctctacg
     3961 gcaccacctc cacagtctgg ggcatggccg cggtcatgtc cttcgaggac ttctccaccc
     4021 tgtccaacaa ttgtcagggc cagcgggtcg gcatcccgcg ggtcggcaac gacaaccagg
     4081 tggggaacgg ttgcaacccc gatcagtcca gagtgtacaa ccagcacagc gagaccggcc
     4141 ggggcgccgc tgacatcctg cggcgcatgg atgccgggct cacctttggc tccgatgaca
     4201 tcgataaccg caatcgggcc ttcgccgagt tcatccgggg tgtttcgctc ggctacctcg
     4261 ccatggtgta cgactcctcg ggcatcacct cggccgccga cgaggtcacc tctgcaggaa
     4321 cggccgtcgg cggtgagctt tcgcactaca gtgccgtcat ggactccgcg ctggtcgccc
     4381 tggagaacgc cgagaccgca gcgcttgcag cgtccggtgc ggcgtacccg ataccatcca
     4441 actggatgtt cacgacagcc agtctgaccc aggcatactt tgtccagatc atcaagagct
     4501 accgggcgcg gctccgcgcc aacgtcgcgc ggtacccgaa caccgccgcg tgtcagtccg
     4561 cgaatccgtc gcagacaaat tgtgatgagg aagtcaccgc ggaggacgtc gactgggcca
     4621 aggtcgttgc cgacgcacag ggcgggatca cgtcggatct caatatcacg accagcacca
     4681 cgactggtcc cgacatgtcg tggaccaacc agtggtactc ttacggcacc tggcaccaga
     4741 tgacgccgtt catcgtcggc atggccgaca agaccggtgc ctacaccagc tggatcgcca
     4801 cgccactcga cacccgggga caaggaactc cgttcttcat gcagaccgac gatcagcgct
     4861 tcccccaggg agccgaccgg acggcccagc gggctgactt cacgctggca ggcgtgaccg
     4921 gggtcgcaac caacccgggt tgcaccaatg ccaacactgt gtgcaagcgt tacttccgca
     4981 atcgggatgt agccgatccg gcagctagtc cctcctgggg cgcctcgcaa tacgaccact
     5041 cgcgcttctg gtcctggagg acctcgggct ccggcaccgc ccggaacggg cctttcccct
     5101 tcttcacgct ggccgagctg aacgggctgg aggctgaggg ccatatccgc ctggggaact
     5161 atgcggcggc cgcggcgctg attgaccgca cccgcgcgac ctgcggctac ggaagcgtgc
     5221 ctgcaggttg caccctccgc gccgtcggca atggcttcaa catcacctgg acccccgtcg
     5281 gcggtggagc agcagtaagt cggccgatcg gcggcgggct gcctccgctc tcaggcgtta
     5341 tcaacgacaa tacgacgccc gtaccgggag gcactgcgtg cgttccgaga atcccggtga
     5401 acgccagtga ggccgggggc ggcaccacga cctgcggcac cctcttcgag gcgctgaagt
     5461 gggaaaagcg gatcgaggca gcctattccg cgtatgcaac ctggtatttc gacagccggc
     5521 gttggggtga cctggtcatc aacacacccg tgcactgggc acccccctat caggacctcc
     5581 aggtgcggct gcgccagggg ctccagatct acagcgtggg tgggggcacc aacccgaccg
     5641 gaagcgcggc gcggagtggc tacggctggt gatcgcgtgt tagggccgct tcggcgggtc
     5701 ggagcagccc tgtttggcat tctcctggtg gcttgctaca ccctgcagcc cgtgcggggc
     5761 gtccagcccc aaatcggcag ccgggtagcg ttcgatgtca acgatgtcgg ccgcctcgcg
     5821 ctggccggaa caatgggtcc cgagatcgcg caggtcgaag gccagttgct cgagaaggaa
     5881 aacgggagct acctggttgc ggtgtccacg gtgcggctgc tccgcggcac cgagcaagtc
     5941 tggtcgggcg agcaggtccg gctccagccg gagtatctgg gcccggccta cgagcgcaag
     6001 ttttccctgg gccgttcaat cgggtttggt ctgataggcg tcggaggctt taccgctttt
     6061 ttcgtcaccc gttcgctcct ggcttcgggc agtgaggacg acgggagtcc ccccgacacg
     6121 gtgatcacgc gccgggggcg gccgtaaccg ctggttcggc atctcaacct ctagggagtc
     6181 cggaatgcga cccttcttcc cactctcggt gttgtgcctc gcggccggcc tcgtcagcgc
     6241 ctgca
//
LOCUS       DASYRV010000370         4875 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_148004, whole genome shotgun sequence.
ACCESSION   DASYRV010000370 DASYRV010000000
VERSION     DASYRV010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4875
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148004"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            371..2086
                     /locus_tag="VGQ24_09775"
     CDS             371..2086
                     /locus_tag="VGQ24_09775"
                     /EC_number="1.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HEV8455169.1"
                     /translation="MTLRRLWSPLLAVGLVTCRVNTNERSKIADADLALRRAMAESSN
                     WPSYGRDYSNQRYSPLSQINTGNLGGLTLAWHYATGIPRAFEASPVVIGNIMYVSTPL
                     NHVVALDARTGHKLWEYAESLGTTVHCCGPVNRGVAVYGGRVYMGTLDARLVALDAKT
                     GAKAWGVRVADNERGYAVDAAPVAADGKVIVGVSGAEYGIRGRVTAYDAATGAEVWRF
                     YTIPSPDEGGWWGKWSASDPFGVPLHRDLAREKADSAKYADAWKVGGGSVWQAPAIDR
                     ELGLVIFAVGNPSPDLDGSVRPGDNLHTNSIVAVDLGSGKLRWSFQELPHDVWDLDAA
                     SPVVLVDVPGPDGKTIRAVAQAGKTGWVYVLERATGRPIRRSEAFVPQENLFAQPTPG
                     GVRMLPGANGGSEWSAPAYSPETGYLYVLGLHQPMYYKTKHQPLQPPALWLGGIFVGT
                     GEQQYGLFSAVDLATGKIAWQNRIKDPMIGGALATAGGVVFTGTKDKRFLAFDAKSGQ
                     QLWSYAAEAGVNAPPITYSIDGRQYVAVAAGGNYQINAPRGDQVLAFALTTTAANKAL
                     AEANR"
     gene            2083..2607
                     /locus_tag="VGQ24_09780"
     CDS             2083..2607
                     /locus_tag="VGQ24_09780"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEV8455170.1"
                     /translation="MRHAIACGWLLLVSMPAEVAAQGDSSDLSLIRTNEDGQPTRMPP
                     LPRGVTLDLVRAGDAVFHGKGNCFACHGADGEGLPNAGSALTLSLNFVPTELAAIDSV
                     IMFGIPESVTRSAISMPPRGGKSDLSTDETLAVAAYVWVISQVRGEPWPGGHRTHVDM
                     VPAAALTGTATARP"
     gene            2634..3014
                     /locus_tag="VGQ24_09785"
     CDS             2634..3014
                     /locus_tag="VGQ24_09785"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEV8455171.1"
                     /translation="MSAIALGCGPRAALAWLALLGACGRQAPSTLITGGDPARGKTQI
                     VAYGCGSCHVIPGVSGASGLVGPPLTQFAHRAFIAGEVPNNSEFLVRWISVPQSIEPG
                     TAMPNLGVSEAQARDIAAYLYTLR"
     gene            3332..>4875
                     /locus_tag="VGQ24_09790"
     CDS             3332..>4875
                     /locus_tag="VGQ24_09790"
                     /EC_number="1.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HEV8455172.1"
                     /translation="MPARNFASTRYSGLDQITAANAGQLRLAWTFSTGVTRGHEAAPL
                     VLDNTMYVVTPFPNLLYALDLTQPGARLKWTYKPDPALASQGVACCDLVNRGAAYFDG
                     KIYYNTLDAHTVAVDAKTGKEVWKTKVGDITKGESITMAPLVVKGKVLVGNSGGEFGV
                     RGWLTALDAKTGKLAWRAYHTGPDKDVLIGARFKPFYPQDRGKDLGVTSWPGDAWKIG
                     GGGSWGWISYDPDLNLIYYGTSNPGPWNPDVRPGDNKWTAGMFARDPDNGEAVWAYQW
                     SPHDLYDHDGINELVLLDLPIKGQNRKVLVRPERNGYVYVLDRQTGEVLSADPYGYIT
                     VSKGIDLKTGRPIEVPEKAPQTGKVVREICPAAPGMKDWQPSSYSPRTGLLYIPHQNL
                     CQDEETAEANYIEGTPYVAAIVKMYAGPGGNRGVLTAWDPVARKAVWEVKENFPVWSG
                     TVVTAGDVVFYGTMEGWFKALDARSGKELWRFKTGSGIIGQPVVYRGPDQKEYVAVLS
                     GVGGWAG"
BASE COUNT          888 a         1514 c         1635 g          838 t
ORIGIN      
        1 gcggctgccc gcataagact catcgccccg catgaccgcc gcctactgct ccgagctcat
       61 ggcggacgtt ccactgtcgg ccaggaggtc gatcagtacg tcctctgccc gcaggacgaa
      121 gacgttgaac cccgccgccc ggagcctcgc gtcgcgctcg gcgcgtggtc atgcgaatcg
      181 gctcgaccga cttgatcttg aacggctcga tgatggtgcg catggcccgt cgtggtgaaa
      241 ggatgaaggg agtgagcagg atcacggcgc cgtggtcttc tacgtggaat gtatgatctc
      301 cgaacgaatc ctgatgtagg tgggcgagac catgtcttcg gcgccgcgcg acccggctga
      361 gtccgtatcg atgacccttc ggcggctctg gtcgccgctg cttgctgtcg ggctggtcac
      421 ctgtcgcgtc aacacaaacg agcggtcgaa gattgcggat gcagacctcg ccctgcggcg
      481 agccatggcc gagagctcga attggccctc ctacggccgg gactacagca accaaaggta
      541 ttcaccactc tcccagatca acaccggcaa cctcggaggc ttgacgctgg cctggcatta
      601 cgccaccggc attccccgag cgttcgaagc cagtccggtg gtgatcggaa acatcatgta
      661 cgtctccacc ccgctgaatc acgtagtggc gcttgacgcg aggacaggtc acaagctgtg
      721 ggaatacgcg gaaagtctcg ggaccacggt gcactgttgt ggcccggtga atcgcggggt
      781 ggctgtctat ggcggccgcg tttacatggg gacgctcgac gctcgcctgg tggccctcga
      841 cgcgaagacc ggggccaagg cctggggcgt gcgtgttgcc gacaacgagc ggggttatgc
      901 cgtggacgcg gcccccgtgg cggctgatgg aaaggtgatt gtcggcgtga gcggcgccga
      961 gtatggcata cgtggcaggg tcacggcgta cgatgcagcg accggtgcgg aggtctggcg
     1021 cttctacacc attcccagcc ccgatgaggg tggatggtgg ggaaagtgga gcgcgagcga
     1081 cccgttcgga gtcccgctgc accgcgattt ggctcgggaa aaggcggaca gcgccaagta
     1141 cgctgatgcc tggaaggtgg gcggcggttc ggtgtggcag gcaccggcga tcgaccgcga
     1201 actaggcctc gtgatcttcg cagtggggaa cccctcgccc gatctggatg gaagcgtacg
     1261 gcctggggac aacctccaca ccaactcgat tgtcgcggtg gatctcggca gcggcaagct
     1321 caggtggtcg tttcaggagt tgccacacga tgtctgggac ctcgacgcgg ccagccccgt
     1381 cgtgctggtg gatgtcccgg ggcccgacgg caagaccatt cgcgctgtgg cccaggcggg
     1441 aaagaccggc tgggtctatg tgctcgagcg cgcgaccggg cggccgatcc gccgctcgga
     1501 agcgttcgtg ccgcaggaga accttttcgc ccagcccacg cccggcgggg tgcggatgct
     1561 acccggcgcc aatggagggt ccgaatggtc tgcccccgcg tacagcccgg agaccggtta
     1621 cttgtacgtg ctcggtcttc atcagccgat gtattacaag accaagcacc agccgctcca
     1681 gcctccggcc ctctggctgg gtgggatttt cgtcggcacg ggggagcagc agtacgggct
     1741 gttcagcgcg gtcgatctgg ctaccgggaa aatcgcttgg cagaatagaa tcaaagatcc
     1801 gatgatcgga ggtgcgctcg ccaccgccgg cggggtggtg ttcaccggaa ccaaggacaa
     1861 acgattcctc gcctttgacg caaagagcgg gcagcagctc tggagttacg cggccgaggc
     1921 cggggtgaat gcgccgccga tcacctactc gatagacgga cggcagtatg tcgcggtggc
     1981 ggcgggcggg aactatcaga tcaacgcccc gcggggtgat caggttctcg cctttgcgct
     2041 cacgaccacc gcggccaaca aagcgttggc ggaggccaac cggtgaggca tgccatcgcc
     2101 tgcgggtggc tgctgctggt aagcatgccg gcagaggtgg cggcacaagg ggactcgtcg
     2161 gacctttcgc ttatccggac caacgaggac gggcagccga ccaggatgcc cccgcttccg
     2221 cggggcgtga cgctcgacct cgtgcgtgcg ggagacgccg tatttcatgg caaggggaac
     2281 tgcttcgcct gccatggcgc cgatggtgaa ggcctgccga atgccggctc cgccctcacg
     2341 ctgtcgctga actttgttcc caccgagctg gcggccatcg attccgtgat catgttcggc
     2401 atacccgaat cggtcacccg ttctgcgatc tcgatgccgc cacggggagg caaatccgac
     2461 ctgagtacgg acgagaccct ggcagtggcg gcgtacgtct gggtcatcag ccaggtgcga
     2521 ggcgagccct ggcccggtgg ccatcgaact catgtcgaca tggtccccgc ggcggcgctg
     2581 accggaacag cgactgcgag accgtaggag gacggcatat caagcgccac ccattgagcg
     2641 cgatcgccct agggtgcggc cccagggccg cgctggcctg gctcgcgctc ctcggcgcct
     2701 gcggccgcca agcgccaagt acccttatca ccggagggga tcccgctcgg ggcaagaccc
     2761 agatcgtggc ctatgggtgc ggatcctgcc acgtcatccc cggagtcagt ggagcgagtg
     2821 gcctggtggg cccgccgctc acgcagttcg cgcatcgtgc gtttattgcc ggcgaggtcc
     2881 ccaacaacag cgagttcctg gtgcggtgga tctcggtacc ccaatcgatc gagcccggca
     2941 cggcgatgcc taatctcggc gtgagcgagg cccaggctcg ggacatcgcg gcgtacctgt
     3001 acacgttgag gtagggagcg agcagctggg cgagaggcct gggattactg tagctcaggt
     3061 cacagcatct gtcccggggc acatgaatgt tccttccggc cgctaggcgt ggcggcggta
     3121 tgggaaccca agccaatagg ctgaagtcgt gatttcgctg catcgctgct gcgcgcgcct
     3181 tgaaattggc gcggtgctct tcttcggctg ctcccagggg cccgagcgcc caccgctccg
     3241 cactcgcccc aatgtgacca gcactctccc ggcccgggtt tcacctgata cctcagcatc
     3301 ttctcccgcg cctgatgacg ggcagtggat catgcccgcc cgaaacttcg catccacgcg
     3361 atacagcggt ttggaccaga tcaccgcggc aaatgccgga cagctccggc tggcctggac
     3421 cttctcgacc ggcgtaaccc gggggcacga ggccgcgccg ctggtcctgg acaacaccat
     3481 gtacgtggtg acgccgttcc ccaacctgct gtacgcgctc gacctcaccc aacccggcgc
     3541 tcgactcaag tggacctata aaccagaccc ggcgctggcc tcgcagggcg tagcctgctg
     3601 cgacctcgtc aatcggggcg ctgcctattt cgacgggaag atctattaca acaccctcga
     3661 cgcgcacacg gtggcagtgg acgccaagac cggcaaggag gtctggaaga caaaggtcgg
     3721 agacatcacc aagggggaga gcatcacgat ggcgcccctg gtggtgaagg ggaaggtact
     3781 ggtagggaac agcggcggtg agttcggcgt gcggggctgg ctcacggcac tcgatgccaa
     3841 gaccggaaag ctcgcctggc gcgcctatca cacgggtccc gacaaagacg tgctcatcgg
     3901 cgcccggttc aaaccgtttt atccccagga ccgaggcaaa gacctcggcg tcacctcctg
     3961 gccgggtgac gcctggaaga tcggcggagg agggtcgtgg ggttggatct cgtacgatcc
     4021 tgatctgaac ctgatctact atggcacctc caatccgggt ccgtggaatc cagacgtccg
     4081 gccgggtgat aacaaatgga ccgcgggcat gttcgcccgc gatccggaca acggtgaagc
     4141 ggtgtgggcc taccagtgga gcccccacga tttgtacgac cacgacggga tcaacgagct
     4201 ggtgctgctc gatctcccga tcaaggggca gaaccggaag gttctggtcc gccccgagcg
     4261 caacggttac gtctacgtgc ttgatcgcca aaccggcgag gtgctgtcgg ctgatcctta
     4321 cgggtacatc accgtgtcga aggggatcga tctcaagacc ggccggccaa tagaggtgcc
     4381 cgaaaaggcc ccccaaacag gcaaagtagt acgcgagatc tgcccggccg cgcctggcat
     4441 gaaggattgg cagccctcat cgtattcgcc tcgcacgggc ctcctctata tcccgcacca
     4501 gaacctctgc caggacgagg agaccgccga ggcgaactac atcgagggga caccgtatgt
     4561 ggcggccatc gtgaagatgt atgccggccc cggcggcaac cgtggtgtac tgaccgcttg
     4621 ggatccggtg gcgagaaagg ccgtgtggga agtcaaagaa aacttcccgg tgtggagcgg
     4681 caccgtcgtg accgcgggcg atgtggtgtt ctacggcacc atggaaggct ggttcaaggc
     4741 gctcgacgcc cgcagcggaa aggagctgtg gcggttcaag accggctccg gaatcatcgg
     4801 ccagccggtc gtgtatcggg gacccgatca aaaggaatac gtcgccgtgc tttccggggt
     4861 cggtggttgg gctgg
//
LOCUS       DASYRV010000371         2479 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1810666, whole genome shotgun sequence.
ACCESSION   DASYRV010000371 DASYRV010000000
VERSION     DASYRV010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2479
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1810666"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..935
                     /locus_tag="VGQ24_09795"
     CDS             <1..935
                     /locus_tag="VGQ24_09795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455173.1"
                     /translation="QALAQQELIDALLKAGVTIGDLETAAKDLGLELRNPETGKIEFA
                     ALQQVLQALKGLDFAKVGEDFASQLQHLEDLIQIGVVDPSEKFGKILELLGKTPSSSP
                     AITGALAGLDVTTAGGRQAATGALQDLIEHIGDLTATEFGKLTRDQFTDVVKQLLELL
                     RSDQPIAGNTLGLQPLIPGLPTGVSPELGAALGGLSGAGFGSGGLGDAFGVAAGTPDF
                     SEFVQVEIGSQDLLRSIDSTLSRGIAPVSLVVNAPMTITVERGSGDAAQIGQAVQEAA
                     AGLADQLVRQIEQALGDNLVTVNAQRGIATRRAV"
     gene            936..1745
                     /locus_tag="VGQ24_09800"
     CDS             936..1745
                     /locus_tag="VGQ24_09800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455174.1"
                     /translation="MAWSLTVNGTDPAAAGFFFTFGSDGVFDAVNRTAQLLNVSGRAG
                     TIFGNPVQEGVRLIQIRGLLTSTAKTAAAREIAEDKFKDMMRAGLVRLVRTSSSNVPR
                     CIEGFTTGPIKITPVGNLLDATDSQAELTLTCQDSYWRDIEPTLRGCPAAATRYTLPL
                     GTAPSTALIRNVGAANTPVITYRDAGGAIIWQLTIGHNLAATNDWFDSDMRSGKFTKW
                     ASGVTSNGIGGLSGSFPVVFDPQDGDYVTSQWPTIETSLGTLDVLYWKQWQ"
     gene            1742..2464
                     /locus_tag="VGQ24_09805"
     CDS             1742..2464
                     /locus_tag="VGQ24_09805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455175.1"
                     /translation="MTMPGLGFRRGATRAYRHPFVWEAQELTIDALTGQTGTMTRAAT
                     ATPTDSFAATRTVNYNQPAWHYTAAKLKTGLLLGTNAELYWDVPLLPGAYGGAVHFIE
                     NGGKAVVGGGVWGFTNDAATGARIYIDATGSFYRITYTDGTTTRTNTLAAAPVTGDEV
                     WLRWGLTSAGVAQIWQSINGAAETTPGALTALALPAVWAATVKMRFNAIGLSANRGNN
                     IYLDGAVLGGAPSLATLQTVLT"
BASE COUNT          433 a          849 c          829 g          368 t
ORIGIN      
        1 ggcaggcgct cgcgcagcag gagctcatcg atgcgctcct caaggcgggg gtcacgatcg
       61 gtgacctcga aaccgccgcc aaggacttgg gcctcgagct ccgaaacccc gagaccggga
      121 agatcgagtt cgcggccctc cagcaggtgc tccaggcgct caaggggctc gatttcgcca
      181 aggtgggcga ggacttcgcc agccagctcc agcatctcga ggacctgatc cagatcgggg
      241 tggtggaccc ctcggagaag ttcgggaaaa tcctcgagct cctcggcaag acgcccagca
      301 gctcgccggc tatcaccgga gcgctggcgg gcctggacgt caccaccgcg ggtgggcgcc
      361 aggccgcgac tggggcgctg caggacctga tcgagcacat aggggacctg accgccaccg
      421 agtttgggaa gctcacgaga gaccagttca ccgacgtggt caagcagctg ctcgagctgc
      481 tccggtcgga tcagccgatc gcgggcaaca cgctcggtct ccagcccctc atccccgggc
      541 tcccgaccgg cgtcagcccc gaactcgggg ccgccctggg tggactgtcg ggagccggtt
      601 tcggatcggg agggctgggc gacgccttcg gcgtagcggc cggcaccccg gatttctccg
      661 aattcgtcca ggtcgagatt gggtcgcagg atctcctgcg gtcgatcgac agcacgctca
      721 gccgcgggat tgccccggtc tccctcgtgg tcaatgcccc gatgactatc acggtcgagc
      781 gcggcagtgg ggatgccgcc cagatcgggc aagcggtcca ggaagcggcg gccggcctcg
      841 ccgaccagct ggtccggcag atcgagcagg cgctggggga caacctggtg acggtgaacg
      901 cccagcgcgg tatcgcgacg cggagggcgg tctaagtggc ctggtcactc acggtcaacg
      961 gcacggatcc ggccgctgcg ggcttcttct tcactttcgg cagcgacggg gtcttcgatg
     1021 cggtgaatcg cacggcccag ctcctcaacg tcagtgggcg ggcgggcacg atcttcggga
     1081 acccggtcca ggaaggcgtg cggctgattc agattcgcgg cctcctcacg agcaccgcga
     1141 agaccgccgc ggcccgagaa atcgcggaag acaagttcaa ggacatgatg cgggcgggac
     1201 tggtgcgcct ggtgcggacc agctcctcga acgttccgcg ctgtattgag gggttcacga
     1261 ccggccccat caaaatcacg ccggtaggca atctcctcga tgccacggac agccaggcgg
     1321 agctcacgct gacctgtcag gacagttact ggcgggacat cgagcccacc ctccgggggt
     1381 gtccggcggc cgcgacccgc tacaccctgc cgctgggcac ggccccgtcc acagccctca
     1441 tccggaacgt cggcgccgcc aacaccccgg tgatcaccta ccgggatgcg ggcggggcga
     1501 tcatctggca actgacgatc ggccataacc tggccgcgac gaacgactgg ttcgactccg
     1561 acatgcggtc gggcaagttc acgaaatggg cgagcggcgt cacgtccaac gggatcggtg
     1621 gcctgagcgg ttccttcccc gtcgtcttcg acccccaaga cggcgactac gtcacgagcc
     1681 aatggccgac gattgagacc tcgctgggca cgctcgacgt gctctactgg aagcagtggc
     1741 aatgacgatg cccggcttgg ggttccgccg tggcgccacc cgggcgtacc gccacccgtt
     1801 cgtctgggag gcccaggagc tcacgatcga cgcgctcacg ggccagacgg gcactatgac
     1861 ccgcgccgcg acggccacgc cgacggatag cttcgcagcc acccgcacgg tcaactacaa
     1921 ccagccggcc tggcattaca cagccgccaa actcaagacc ggcctcctcc tggggacaaa
     1981 cgccgagctg tactgggacg tgccgctcct tcctggtgcg tacggcggcg ccgtgcattt
     2041 catcgagaac ggcgggaagg ctgtggtcgg cggcggggtg tggggcttca ccaacgacgc
     2101 cgcgactggg gcccgcatct acatcgacgc gaccggcagc ttctatcgca tcacctacac
     2161 cgacggcacg acgacccgga ccaacaccct cgcggcggcc ccggtgacgg gcgatgaggt
     2221 ctggctccgc tgggggctca ccagtgcagg ggtcgcccag atctggcaga gcatcaacgg
     2281 cgcggcggag acgacgcccg gagccctcac cgcgctcgcc ttgccggcag tctgggctgc
     2341 gacggtgaag atgcgcttca atgccatcgg cctctcggcc aaccgcggga acaacatcta
     2401 tctcgatggc gcggtgctgg gcggcgcgcc cagcctcgcc acgcttcaaa cggtgctcac
     2461 atgagcacac tcatggagc
//
LOCUS       DASYRV010000372         3202 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1811823, whole genome shotgun sequence.
ACCESSION   DASYRV010000372 DASYRV010000000
VERSION     DASYRV010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3202
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1811823"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..380
                     /locus_tag="VGQ24_09810"
     CDS             <1..380
                     /locus_tag="VGQ24_09810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HEV8455176.1"
                     /translation="VILNIDAENKRISLGLKQAEEDPWLEIGETYPIGMELRGRAVRL
                     MDKGVVVDLGNDIEGFVPMSQLGVPNIENPGDAVKEGQVLDLKVLEVDPIHHRIVLAV
                     IGYPDEPIIPPVRPAFEETTVTE"
     gene            421..1974
                     /locus_tag="VGQ24_09815"
     CDS             421..1974
                     /locus_tag="VGQ24_09815"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013935707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HEV8455177.1"
                     /translation="MPDPRKLLDELHHRRELAQQGGGPDRVAQQHNKGKLTARERLDL
                     LLDEGSFLELDRFVTHRSTDFGLDQQVFPGDGVVTGSGRIDGRLVYVFSQDFTVFGGS
                     LSEAHAEKICKVMDLALKTGAPVIGLNDSGGARIQEGVASLGGYADIFLRNTLASGVI
                     PQISAVLGPCAGGAVYSPAITDFIFMVRGVSYMFVTGPNVVKTVTHEEVSFDELGGAD
                     THGGTSGVAHFVHDSEPECIQAIRELFGFLPLNNLDEPPQRPTPDPADRRDQALLDLI
                     PDTPNKPYDVHGVIGRVVDEGAFLEVQRGHADNIVVGFARLGGAPVGIVANQPAVLAG
                     VLDINASIKAARFIRFCDCFNLPVVTFVDVPGFLPGVGQEHGGIIKHGAKLLYAYCEA
                     TVPKLTVITRKAYGGAYDVMSSKHIRGDLNLAWPSAEIAVMGPKGAVEILFKEEIAQA
                     EDGAAATERLIEEYTEKFAHPYTAAARGYIDDVIDPRDTRPRLIEALRTLRTKRDRNP
                     LKKHGNIPL"
     gene            2116..3090
                     /locus_tag="VGQ24_09820"
     CDS             2116..3090
                     /locus_tag="VGQ24_09820"
                     /inference="COORDINATES: protein motif:HMM:NF024820.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEV8455178.1"
                     /translation="MRRLLRQGGSTFAVVSTLWSGGVHAQAAIDPNVAPRAAALERSG
                     ERQMAIDLLGRYLATAPDDGRAWFQLGRFYLLDARDWHLQGHRGDPDGLLYLDFAATA
                     FDQAVRLAVDSGVVYRGLAELERSVVLVEDSGWSIGGASRPPADAPEMPGFIVELGAN
                     LLSSCPAGGVLLVGTDLEALSVWYDNRDLRAREILPIRPDRYATDSVYRRRMAEAMAI
                     DPDLPVRNALADVAARRPLCLTPTADSAAAPAIVWTPFRLTRVSRTVDPGPDALSLTE
                     LLEATRQGGSVWLEDVRGVYDSAARFNALLCSSLLLVSGDAPPPACRP"
     gene            3078..>3202
                     /locus_tag="VGQ24_09825"
     CDS             3078..>3202
                     /locus_tag="VGQ24_09825"
                     /inference="COORDINATES: protein motif:HMM:NF012510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HEV8455179.1"
                     /translation="MSAVKRVLIANRGEIALRIIRACHEEGLEAVAVYSAADSGSP"
BASE COUNT          536 a         1067 c         1033 g          566 t
ORIGIN      
        1 tcgtgatcct caacatcgac gccgagaaca agcgcatctc gctcgggctc aagcaggcgg
       61 aagaggatcc ctggctcgag atcggtgaga cctaccccat cgggatggag cttcgcggcc
      121 gggccgtgcg gttgatggac aagggtgtgg tagtcgatct gggcaacgac atcgagggat
      181 tcgtcccgat gtcccagctc ggcgtcccca acatcgagaa ccccggcgac gccgtgaagg
      241 aaggacaggt gctcgacctc aaggtgctcg aggtggaccc gatccatcac cgcatcgtcc
      301 tcgcggtcat cgggtaccct gacgagccga tcattccgcc cgtgaggccg gcgttcgagg
      361 aaacaacggt gacggaatag gcgtgccccg ctgccccgct gcacgctatc ttctgccacc
      421 atgcccgacc cccgcaaact cctcgacgaa ctccaccacc gccgagaact cgcccagcag
      481 ggcgggggac ccgaccgcgt cgcccaacaa cacaataaag gcaagctgac cgcgcgggag
      541 cggctggacc tcctcctcga tgaggggagc ttcctcgagc tcgaccgctt cgtcactcac
      601 cgctccacgg atttcgggct ggaccagcag gtattccccg gcgacggcgt tgtgaccggc
      661 tccggccgga tcgatggaag gttggtctac gtcttctccc aggactttac cgtgttcggc
      721 ggatcgctat ctgaagcgca tgccgaaaag atctgcaagg tcatggacct ggcgctcaag
      781 accggggcgc ccgtgatcgg cctcaacgac tcgggcggcg cccggatcca ggagggtgtg
      841 gcctcgctcg gtggctacgc cgacatcttc ctcaggaaca ccctcgcctc aggcgtcatt
      901 ccccagattt cggccgtcct cgggccttgt gccggtggtg cggtgtacag cccggccatc
      961 accgacttca tcttcatggt tcgcggcgtg agctacatgt tcgtcaccgg accgaacgtg
     1021 gtgaagacgg tgacgcacga agaagtgagt ttcgacgagc tgggcggcgc cgatactcat
     1081 ggggggacgt ccggcgtcgc ccacttcgtg cacgattccg agcccgagtg tattcaggcc
     1141 atccgggagt tgttcggatt cctgcccctc aacaacctcg acgagccgcc gcagcggccc
     1201 acgcccgatc ccgctgaccg gcgggaccaa gccttgttgg acctcatccc ggacacgccc
     1261 aacaagccgt acgacgtcca cggcgtaatc ggcagggtgg tggacgaggg cgccttcctg
     1321 gaggtacaac gaggccacgc ggacaatatc gtagtgggct ttgcccggtt gggtggggcc
     1381 ccggtcggta tcgtcgccaa ccagccggcc gtcctggccg gcgtcctcga catcaatgcc
     1441 tcgatcaagg cggcgagatt catccgcttc tgcgactgct tcaacctgcc ggtggtgacc
     1501 ttcgtggacg tgcccgggtt ccttcccggc gtgggtcagg agcatggagg gatcatcaag
     1561 cacggggcca agctgctcta tgcctactgt gaggccacgg tgcccaagct gaccgtgatc
     1621 acccggaaag cctacggcgg agcctacgac gtcatgagct cgaagcacat ccggggagac
     1681 ctgaacctgg cgtggccctc ggcggagatt gcggtcatgg gacccaaggg cgctgtcgag
     1741 atcctgttca aggaggagat tgcccaggcc gaggatggcg ctgcggccac cgagcgtctg
     1801 atcgaggagt acaccgaaaa gttcgctcac ccgtataccg cggcggcccg aggctacatc
     1861 gacgatgtga tagaccccag ggatacccgg ccccggctga tcgaagcgct gcgcacgctt
     1921 cgaaccaagc gagaccggaa tcccctcaag aagcacggga atatcccgct atgagagctg
     1981 ggggtctgga cccgctcacc ggtgcagcgc tggccgccca cgacgtcccc tactagccaa
     2041 gcggtgggcc ccgagccatt tttgacacac atgtgtcagg taggttcctc atgtcccaca
     2101 ctccctgctg atcccatgcg gcgccttctg cgtcagggtg ggtctacgtt tgcggtggtg
     2161 tcgacgctct ggagtggtgg cgtccacgcc caggccgcga ttgacccgaa tgtcgcgccc
     2221 cgggccgccg ccctcgagcg gagcggggag cggcagatgg ccatcgatct gctcggccgt
     2281 tatctcgcta ccgcccccga cgatggccgc gcctggttcc agctcggccg cttctatcta
     2341 ctcgatgcac gtgactggca cctccaaggc caccggggcg atcccgatgg ccttctctat
     2401 ttggactttg cggcgaccgc gttcgaccaa gcggtgcggt tggcggtgga ctccggtgtg
     2461 gtgtaccgtg gtctggcgga gctcgagcgg tcggtggtgc tcgtcgagga ttcgggctgg
     2521 agcatcgggg gtgcttcgcg cccgcccgcg gatgcgcccg agatgccggg cttcatcgtt
     2581 gagctcggag ccaacctcct cagctcgtgc cccgcgggcg gcgtcctgct ggtggggacc
     2641 gatctcgagg ccttatcggt gtggtacgac aaccgggatc tgcgcgctcg ggagatcctg
     2701 ccgatacggc ccgaccgcta tgccaccgat tctgtctatc gccggcgcat ggccgaggca
     2761 atggccatag acccggacct cccggtccgc aacgccctgg cggatgtggc ggcgcgccgg
     2821 ccgctgtgcc tgacgccgac tgccgacagc gctgcggctc ctgcgatcgt ctggacgccg
     2881 ttccggctca cccgggtcag ccggacggta gacccaggcc ccgatgccct gtcgctcacc
     2941 gagctgctcg aggcgacacg ccagggtgga tcggtctggc ttgaggacgt gcgtggcgtc
     3001 tacgatagcg ctgcccggtt caatgccctc ctttgtagca gcctcctgct cgtctccgga
     3061 gacgcgccac cgcctgcgtg tcggccgtaa aacgcgtcct catcgccaat cggggagaaa
     3121 tcgctctccg aatcattcgc gcatgtcatg aagaaggcct cgaggcggtc gcggtgtact
     3181 ccgcggccga cagcggcagt cc
//
LOCUS       DASYRV010000373         8205 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_149214, whole genome shotgun sequence.
ACCESSION   DASYRV010000373 DASYRV010000000
VERSION     DASYRV010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8205
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149214"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2501)
                     /locus_tag="VGQ24_09830"
     CDS             complement(<1..2501)
                     /locus_tag="VGQ24_09830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455180.1"
                     /translation="MVSFLKGRRREDDTVVAVDSSGRNVTAALEALVARAEAAANDLR
                     LLAPILERVSELDGLRERCTDIERQVAGLERLGSQLAMAEEQAERVIKTQTATETRLA
                     HAGEDVERLQGQMGSLSDKVETALLLREQVESFLSLQGPLAALSTDADTLRAQLGELS
                     ENVARMRTQHDDALTAHRHTTSRLENFDQDFQAATGKLEDVVRRVQSVERSLEPINHA
                     STAIPDVQHQLAVLKALADQVAQKTNMLEQEREAVDRAATQIAQLTRMDRELDAWLRR
                     QEEQIRRFGPIEAKLTEVKTIQDKVLSRTEELQSTSQKIEEAQQSARQALTDLREQMR
                     KSSEGFELEHRGLHAVSERIADLRNAVKECEARLATLDAASQSTAAVQAQVRTVGEQI
                     NQLAGEVAEISEEATRASTLRQEVARLDSLTGELGSRMRRIDEIRPGVEQAVEQLSTL
                     KGTRELLADGLEQMRVAYEEMTRLRENHGETQAWLANADVWTRKVQTQVKELSGLEPM
                     VERIRMEVEQVKKSMEQIEAGRELVQQVHSGLLEVGSLNNELKERTDGLRNRMEAAET
                     RFAQLSRQAEGAQRLSDSISVVTASVEEAERRMSSVDDSVRALEGRTQQIDQMEERIR
                     LLGQELEQRQGALDKATEHLSRASQLRKESAEVAQRMEDITRTVSTTLSQAQEQAGGL
                     QRLTGELDTRAGALKAVDRQLSHFEELLTRWESAQTEAGKALEQTLARQAGVEAIEAQ
                     VKHVFDLAERTVEDVQTIGSARREIEETRSMLAATQEQFKTTEETLKGFESRKRQLER
                     AEQRLARAEALALGIRSTVESLTAQKTVVDHAMESA"
     gene            complement(2787..3428)
                     /locus_tag="VGQ24_09835"
     CDS             complement(2787..3428)
                     /locus_tag="VGQ24_09835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455181.1"
                     /translation="MRLAALIGLALAAAPLSAQQVTVGAGYALSDYREQADFLHFRGT
                     GPAGLLTVEHGRFALRADAWHLSMDPTGEAAASLESFTVDEVNVRLGVRAVSVLALEA
                     GYLRRSVAPSRAAQSYSAATLGLRAAYPLAPGAEVAVRTSYVAGTGFTGGGSAPFGIE
                     LGLSAGYGPGSGRFRVTGDYGFQRIDRRTDQNGTRLSVPIQSSVARLGLAVRF"
     gene            complement(3425..4468)
                     /locus_tag="VGQ24_09840"
     CDS             complement(3425..4468)
                     /locus_tag="VGQ24_09840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455182.1"
                     /translation="MSRIATLALAAAFGIPLAAAGSPVAAQGSATLRRAGQAYGNLSY
                     SEAITLARQASRERLSSDDQAQAYELLGFAYASLDSSRQATEAFKQTLLLNPDRALNA
                     ARVSPKITSAFALALAQVLVLRELRIDSTEFVAGTGTLPISFTVTRTAKLRTRLIGPS
                     GGVTIDSALGEGTVRLAWNGLLSNGQPPAHGTYRLTVEASAGRDSYAASIPLLIVAGA
                     VDTLAHLISLPGYDLLPETVVPARSWRPVGLALMATSLAVGGSLALENSKLGGGGRRE
                     ILTIGAGAALVGLFATLKKPAAVPAQANILYNSLVREQLARRNTEIAAQNTERRRQVK
                     LSVVPQPRNGRKS"
     gene            complement(4465..5928)
                     /locus_tag="VGQ24_09845"
     CDS             complement(4465..5928)
                     /locus_tag="VGQ24_09845"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEV8455183.1"
                     /translation="MKDCVRCHTPLPVDGRFCSNCGTPSSELSHACPPDPTEELKERL
                     ARTLAGRYEIIRLLGRGGMAVVFLAQDLVLEREVAIKVLPPDMSHDTKLIPRFHQEAR
                     TAAKLDHPNIIPIYRVESEAGLNYFVMKYVNGRPLDQVLDEGPLPVAQARRILREAAL
                     ALGHAHQRKIVHRDVKPANIMLEADGRVVLTDFGISKAAQGSSQLTGTGAIIGTPHYM
                     APEQAKGLEVDGRADQYALAIVGHQLLTGKLPFDGTAHSILYKQVFEPPPPVIEVRPD
                     TPKDLSRALERALSKDPEHRFPSMEDFAAAVSGERAGTATVVSAPVKPKPGTTNRPML
                     LAFIVAVLGIAVAAWFGLVPTGAAKPVPRQESVVSRTPAPSQAPPAPAVTQKEPTTLA
                     QRERRTQATAPQGPGETPKLRAVKREYALLTVASEPWGTLYIDNIEIGPTPVADYRLI
                     PGTYRLRIEQEGYRTKKETIVISGPNPIRKRYSLEPQ"
     gene            complement(5925..7526)
                     /locus_tag="VGQ24_09850"
     CDS             complement(5925..7526)
                     /locus_tag="VGQ24_09850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455184.1"
                     /translation="MRQSSPRVIVCALAAGVAGLLGACSDTTEAVDQTFVTINAASPV
                     VLRGDQLELTASVWIRTAPGDSVVVPNAELMWTTDDPTLATLTPKDNHTAIATGVNSG
                     IVGIHAVATGFQGAAQSVFPLRVSNPLEIDSMRPATVRYGEKITMYGVGVNTLFFAAI
                     QGAALLPDTFSVAAGAGGVGQLSFWVPPPATSGHTVVLSPGQIVVAADSTTVLRRDLY
                     EPNDATPSLIDISATPFPTLPAVRFYNPALAFEDRVRADSLGVDWYRLAGASAGSDLT
                     FIFQAPTFQNAHLTFLASPVNSADSVARPGWTIGSGFYACKDHAFKVEEQPADSLIIA
                     LKNVPAGNMDLISLFFVSGRYGMAVVEGYLTSDPSIGADRLEENDNCEFADRNFADPA
                     TRVDLTAPFADTLTIDNPHDVDWIRFRVPGLLPQPVTFQTAPRGAVDPTRPGDVDLYV
                     LGVPVAGSPLDVRGSSRAEGSTEAMTLVLDPGDYYMVATDFAGTPTRYSLCAAVGASC
                     SLPASSMISRVPAPSREAVRRGGAK"
     gene            7810..>8205
                     /locus_tag="VGQ24_09855"
     CDS             7810..>8205
                     /locus_tag="VGQ24_09855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455185.1"
                     /translation="MGRINVKGVIVGGLVAGLVLNVIDYLVYGVWLAPDMAAAMQAAG
                     RPPIDNLIPLFVLLDFLYGIAVVQLYAAIRPRFGAGPGTAVKAGIYVWVLTGLLHAIG
                     EAPMGLLPQRLYIIGTLVALVSFPLAALAG"
BASE COUNT         1264 a         2702 c         2789 g         1450 t
ORIGIN      
        1 gcggactcca tcgcgtgatc caccacggtc ttctgtgccg tgagggactc gacggtcgag
       61 cggatgccga gcgcgagcgc ctccgcccgg gccaggcgtt gctccgcccg ctccagctgg
      121 cgcttccgcg attcgaatcc cttgagcgtc tcttcggtgg tcttgaactg ctcctgtgtg
      181 gctgccagca tcgagcgggt ctcctcgatc tcccgccggg cggacccgat ggtctggacg
      241 tcctcgacgg tgcgctccgc cagatcgaac acgtgcttga cctgggcttc gatggcctcg
      301 acgccggcct gccgcgccag ggtctgctcc agggccttgc ccgcctccgt ctgggccgac
      361 tcccacctgg tgagcagctc ttcgaagtgg gacagctgcc ggtcgaccgc cttgagggca
      421 ccggcccggg tgtcgagctc gcccgtgagc cgctgcagac ctccagcctg ttcctgcgcc
      481 tggctcagcg tggtgctgac ggtccgggtg atgtcttcca tccgctgagc gacttcggcc
      541 gattccttcc gcagctgaga ggcacgactc aggtgctcgg tagccttgtc cagcgcgcct
      601 tgccgctgct ccagttcctg gcccagcaac cggattcgct cctccatttg atcgatctgc
      661 tgggtacgcc cctccagtgc ccgcaccgag tcgtccactg agctcatccg ccgctcggcc
      721 tcctcgaccg acgcggtgac gaccgagatc gaatcggaga ggcgctgggc cccttcggcc
      781 tgtcgagaca gctgggcgaa ccgggtctcg gcggcctcca tccggttgcg caacccgtcg
      841 gtccgctcct tcagctcgtt attcaacgag ccgacctcga gcagaccact gtgcacctgc
      901 tgcaccagct cgcggcccgc ctcgatctgc tccatggact tcttgacctg ctccacctcc
      961 atccggatcc gttcgaccat gggctcgagc ccgctcagct ccttcacctg ggtctgtacc
     1021 ttcctggtcc atacgtcggc attggcgagc caggcctggg tctcaccgtg gttctcccga
     1081 agccgggtca tctcctcgta cgcgacccgc atctgctcca ggccatcggc caggagctcg
     1141 cgggttccct tgagcgtgga gagttgctcg accgcctgct ccacgccggg cctgatctcg
     1201 tcgatccggc gcatccggga cccgagctcg ccggtgagcg agtcgagccg cgcgacctcc
     1261 tgccgcagcg tactggcgcg ggtcgcctcc tccgatatct ccgcgacttc tcctgcgagc
     1321 tggttgatct gctcgcccac ggtccgcacc tgagcctgaa ccgccgccgt actctggctg
     1381 gccgcgtcca aggtggccag acgggcctcg cattccttca ccgcattgcg aagatcggcg
     1441 atgcgctcgc tcacggcgtg gaggccgcga tgctccagct cgaacccttc actgctcttc
     1501 cgcatctgct cgcgcaaatc agtcagggct tgacgggccg actgctgggc ctcctcgatc
     1561 ttctgcgagg tcgactgcag ctcctcggtg cgagagagga ccttgtcctg gatcgtcttc
     1621 acttcggtca gcttggcttc gatcgggccg aaccggcgga tctgctcctc ctgccggcgc
     1681 agccaggcgt ccagctcccg gtccatgcgg gtgagctgcg cgatctgggt cgcggcccgg
     1741 tcgaccgcct cacgctcctg ctccagcatg ttggtcttct gggcgacctg gtcggccagt
     1801 gccttgagga cggcgagctg atgctgcacg tcgggaatgg cggtcgacgc gtggttgatc
     1861 ggctccagcg agcgctcgac cgactgcacc cggcggacca cgtcctccag cttgccggtg
     1921 gcagcctgga agtcctggtc gaagttctcg aggcgtgagg tcgtatgccg gtgggccgtg
     1981 agggcatcgt cgtgctgggt ccgcatccgg gcgacgttct cagacagctc accgagctgg
     2041 gcgcgcaggg tgtcggcatc ggtgctgagc gctgccaagg gcccctgaag gctcaggaac
     2101 gactcgacct gctcgcggag caggagggcg gtctcgactt tatcactcag cgagcccatc
     2161 tggccctgga gccgctcaac gtcttctccg gcatgggcca agcgcgtctc agtcgcggtc
     2221 tgggtcttga tgacccgctc cgcctgctcc tcggccatgg cgagctggga gccgagtcgc
     2281 tccagtcccg ccacctgtcg ctcgatgtcg gtgcagcgct cgcgcagacc gtccagctcg
     2341 gacacccgct ccaggattgg ggcgagcaac cggagatcat tggcggcggc ttcggcgcgg
     2401 gcgacgagcg cttcgagggc ggcggtgacg ttacggccgc tcgaatcgac tgctaccacc
     2461 gtgtcatctt cgcggcggcg acctttgaga aaactgacca ttttggttac tccgagggaa
     2521 aatgcgggcg atctcggatc acgcgcggtg aagattttcg cacgaagggg gacggggatc
     2581 tacctgcaac gcgtgtgccc cgagttgccg cccggcccgg accggaatca ggccgagcct
     2641 cgcgtacgca aaccgctacg ggcgcgggag attgctccga gggcgtcgcc ggaaaaaatc
     2701 ggcggacctg agcgcgagca ggccaaggag atggcgagct tggcgaggtg cgagggttca
     2761 gggcaggtcg cgggtgacct gttgccttag aatcggacgg cgagtccgag ccgggccacc
     2821 gagctctgga tcggcacgct caggcgggtg ccgttctgat ccgtgcggcg atcaatgcgc
     2881 tggaatccat agtcgccggt gacccggaag cgaccggacc cgggcccata tccggcgctc
     2941 agtcccaact cgatgccgaa tggggcggac ccgcctccgg taaagccggt gccggcgacg
     3001 taggaggtcc gtaccgcgac ctccgcacca ggagcgagcg gataggctgc cctgaggccg
     3061 agcgtggcgg cgctatacga ttgggcggcg cgagatggag cgaccgaacg gcggaggtag
     3121 ccagcttcga gagcgagcac gctcaccgcc cgcacgccaa gccgaacatt tacctcatcc
     3181 acggtaaagg attcgagact ggccgcggcc tcgccggtgg gatccatgct caagtgccac
     3241 gcgtcggcgc gaagcgcaaa gcggccgtgc tccaccgtga gcagtcccgc cggcccggtg
     3301 ccgcggaagt gaaggaaatc cgcctgctcg cggtagtcgg acaaagcgta cccggccccg
     3361 actgtgacct gctgtgccga cagtggcgcc gcggccagtg cgagcccgat cagcgctgcc
     3421 agcctcatga cttcctccca tttcgcggct gcggcacgac tgagagcttc acctgccggc
     3481 gacgctccgt gttctgggcg gcgatttccg tgttccgacg ggccaattgc tctcggacca
     3541 ggctgttata gagaatgttg gcttgggccg gcaccgccgc tggcttcttg agcgtggcga
     3601 acaggcctac gagggcggcc ccggctccga tggtcagaat ctccctacgc cctccgccac
     3661 ccagcttgga gttctccagc gccaggctgc cgccgaccgc aagcgatgtg gccatgagcg
     3721 cgagcccgac cggcctccag ctgcgggccg ggaccacggt ctccggcaac aggtcgtagc
     3781 cggggagcga gatgagatga gccagggtat ccaccgcccc ggccacgatc aggagcggga
     3841 tggacgccgc atagctgtcc cggccggcgc tggcctcgac agtcagtcga taggtgccgt
     3901 gtgccggcgg ctgcccgttg ctcagaaggc cgttccaggc caggcgtacg gtgccttcgc
     3961 caagtgccga gtcgatggtg actccgccgc tcggtccgat cagtcgggtg cgcagcttgg
     4021 cggtgcgcgt cacggtgaag ctgatcggca gcgtgccggt cccagccaca aactcggtgc
     4081 tgtcgatccg gagctcccgc agcaccagga cctgcgccag cgccagggca aaggcactgg
     4141 tgatcttggg cgacactctc gcggcattaa gcgcgcgatc ggggttgagc agcagcgtct
     4201 gcttgaacgc ctcggtggcc tgccgggagc tgtcgagcga cgcgtaggcg aagccgagca
     4261 gctcgtaggc ctgggcttga tcgtcggagc tcagccgctc ccgggaagcc tggcgcgcca
     4321 gcgtgatcgc ctcggagtag gaaagattgc cgtatgcctg gccggcccgg cgcagcgtcg
     4381 cgcttccctg tgcggccacc ggtgatccgg cggcggcgag cgggatgccg aatgcggcgg
     4441 caagagccag cgtggcgatc cggctcattg cggctcgagg ctgtagcgct tgcggatcgg
     4501 gttgggaccg ctgatgacga tggtctcctt cttggtgcga tagccttcct gctcgatcct
     4561 cagacgatag gtaccgggaa tcagccgata atccgccacc ggcgtaggac cgatctcgat
     4621 gttgtcgatg tagagtgtgc cccagggctc cgaggcgacc gtgagcaggg cgtattcccg
     4681 cttgaccgcg cgcagtttgg gagtctcgcc gggcccctgt ggcgcggtgg cctgcgtgcg
     4741 gcgctcccgc tgggccagcg tggtgggctc tttctgcgtg acggcaggtg ccggcggcgc
     4801 ctgagaggga gccggcgtgc gggaaaccac cgactcctgc cgcggaacgg gctttgctgc
     4861 cccagtcggc accaagccga accaggctgc cacggcgatt cccaggacgg cgacgatgaa
     4921 ggccaggagc atcggtcgat tcgtggttcc cggtttgggc ttcaccggcg cgctcaccac
     4981 cgtggcggtc ccggcgcgct cgccgcttac ggcagcggcg aagtcctcca tggaaggaaa
     5041 gcggtgctcc gggtccttcg agagcgcacg ctccaatgcc cggctcaggt ccttcggcgt
     5101 gtccggccgc acctcgatca ccggcggtgg cggctcgaag acctgcttat agaggatgct
     5161 atgggccgtg ccgtcgaacg ggagcttgcc ggtcagaagc tggtggccga cgatcgccag
     5221 cgcgtactga tcggcccggc catccacctc caggcccttc gcctgttccg gggccatgta
     5281 atgcggggtg ccgatgatcg cgcccgtacc ggtgagctgc gacgacccct gggctgcctt
     5341 ggagataccg aagtcggtga gaaccacccg gccgtcggcc tccagcatga tgttcgcggg
     5401 cttgacgtcg cggtggacga tctttcgttg atgggcgtga cccagcgcga gagccgcctc
     5461 gcggagtatc cggcgagcct gcgccacggg tagtggtccc tcatccagca cctgatcgag
     5521 cgggcgcccg ttcacatact tcatcacgaa gtagttgagt cccgcctcgc tctcgacccg
     5581 gtagatcggg atgatgttgg ggtggtccag cttggccgcg gtcctggcct cctggtgaaa
     5641 ccgggggatg agcttcgtat catgggacat atcgggcggg agcaccttga tcgccacctc
     5701 gcgctcgagc accaggtcct gggccagaaa cacgaccgcc atcccgcccc gtccgagcag
     5761 cctgatgatt tcgtaacgtc ccgccagggt gcgggccagc cgctccttca gctcctctgt
     5821 gggatccggc gggcaggcat gggacagctc gctggagggc gtgccgcagt tggagcagaa
     5881 acggccgtcc accggaagag gggtgtggca ccggacgcaa tccttcactt cgctccccct
     5941 ctccggaccg cttcgcggga cggggccggc acccggctga tcatcgagct ggccggcagc
     6001 gagcacgagg cgccgaccgc ggcgcagagg gagtagcgag ttggtgttcc ggcaaagtcg
     6061 gttgcaacca tgtagtagtc acccggatcg agaaccagag tcattgcttc ggtggagcct
     6121 tccgcccgcg acgatccgcg gacatcgagc ggcgagccag ccaccggcac gccgagaacg
     6181 tagagatcca cgtcgcccgg ccgggtcggg tccaccgcgc cgcgtggggc ggtctggaag
     6241 gtcaccggct gcggcaacag cccgggcacc cggaacctga tccagtcgac atcgtgggga
     6301 ttgtcgatgg tgagcgtgtc ggcgaatggg gcggtcaagt ccacccgcgt cgcgggatcc
     6361 gcgaagttgc ggtcggcgaa ctcacagttg tcattctcct ccagccggtc ggcaccgatc
     6421 gacgggtcgc tggtgagata tccctccacc accgccatgc cgtagcgacc ggagacgaag
     6481 aacagtgaga tgaggtccat attgccggcc ggcacgttct tgagcgcgat gatgagcgaa
     6541 tcggcgggct gctcctcgac cttgaacgcg tggtccttgc aggcgtagaa gcccgacccg
     6601 atggtccatc ccggccgagc caccgaatcg gcactgttca ccggcgaggc cagaaaggtg
     6661 aggtgcgcgt tctggaaggt cggcgcctgg aagatgaagg tgagatcgct tcccgccgag
     6721 gcgccggcca ggcgatacca gtcaactccg agggagtcgg cacgaacccg gtcctcgaac
     6781 gcgagcgcgg ggttgtagaa gcgaacggcg ggtagcgtgg gaaacggcgt cgccgagatg
     6841 tcgatgaggc tcggtgtggc gtcgttcggc tcgtacaagt cccgccggag caccgtggtg
     6901 gaatcggccg cgacgacgat ctgccctggg ctcaacacca cggtgtgacc gctcgtggcc
     6961 ggtggcggga cccagaagct gagctgaccc acgcccccgg cgccggcggc gacggagaag
     7021 gtgtcgggca gcagggcggc accttggatc gccgcaaaga acaacgtgtt cacgcccacg
     7081 ccgtacatcg tgatcttctc gccgtaacgc accgttgccg ggcgcatgct gtcgatctcg
     7141 agtgggttgg agacccggag cgggaagacg gactgcgccg caccctggaa gccggtcgcg
     7201 accgcatgga tcccgacgat accggagttc actccagtgg cgatcgcggt gtggttgtcc
     7261 ttaggagtca gcgtcgcgag cgtgggatcg tccgtggtcc acatcagctc ggcgttcggc
     7321 acgactaccg agtcgccggg cgcggtgcgg atccataccg acgcggtgag ctcgagctgg
     7381 tcaccccgga gcaccaccgg actggccgcg ttgatcgtga cgaaggtctg gtccacggcc
     7441 tcggtggtgt ctgagcacgc ccccaggaga cccgccaccc cggccgcgag cgcgcacacg
     7501 atgaccctcg gggaggattg acgcactggg ctccaggcag cgaatggcac gtgttcgggc
     7561 gcctctcggg caaaacggct ctggtaaatc ccggcatgat gtggcggagt ccgcgaacgg
     7621 cacggcccgt cgagcccggg gctttactca aggtgttgag atggagcgga gttagagcta
     7681 tcggggggag cgggcgagca aggcctgtgc cgagcctgat cttgacaggt gagcgaattg
     7741 gccgcacgtt cgcccgcgcg ctctcagcgc aggcttcctc agttcatccc atccattgcg
     7801 aggtgcccca tgggacgaat caacgtcaaa ggcgtgatcg tcggtggctt ggtggctggc
     7861 ttggtgctga acgtcattga ttatctggtg tacggtgtgt ggctggcgcc ggatatggct
     7921 gcagcgatgc aggcggcggg gagaccaccg atcgataacc tgattcccct ctttgtcctc
     7981 ttggatttcc tctacggtat cgcggtcgtt caactctatg cggcaattcg tccccggttc
     8041 ggcgccgggc ccggcactgc ggtgaaagca ggcatctatg tgtgggtcct aaccggtttg
     8101 ctgcatgcaa tcggcgaggc cccgatgggg ttgttaccgc agcggctcta catcattggc
     8161 actctcgtcg cactggtgtc ctttccgctc gccgcgttgg cgggc
//
LOCUS       DASYRV010000374         3591 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3675080, whole genome shotgun sequence.
ACCESSION   DASYRV010000374 DASYRV010000000
VERSION     DASYRV010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3591
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3675080"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            271..981
                     /locus_tag="VGQ24_09860"
     CDS             271..981
                     /locus_tag="VGQ24_09860"
                     /inference="COORDINATES: protein motif:HMM:NF019590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HEV8455186.1"
                     /translation="MADEGAVRKMRGTLGQRVRHTLLLDSGVLGSRVVREAQLLLKAI
                     EKEGLQGGEHDKSPVVRPRHIHDPGIQQERQVIHVYPYDDLAQRTAVREALAKDTARA
                     QIPGGGEFIVAQEAEIMIPAPFMRPLGSRDYGSGNVYEMRIYTYEPGQIPKVLEAWAT
                     AIPDREKFSPLATCWYSELGGLNKFVHTWVYKDLNERACVREEARTSGGAWPPQAGVR
                     PIRQDNKLLVPAAFSPVR"
     gene            complement(1164..2351)
                     /locus_tag="VGQ24_09865"
     CDS             complement(1164..2351)
                     /locus_tag="VGQ24_09865"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEV8455187.1"
                     /translation="MEKQFGVISADGHCRLMHLPFDLWTKRLPRKLLENGPRVVEGPD
                     GTRQWVVEGRVWSGVGWAGVGRGPVNCYTRAGLPEEPEPGVFRAANAKYRCEDMDRDG
                     VDAELVNGPYEHIAAIRDPELRIACVRAVNDWARELYAESDGRFIMLLPRPCQTPEEA
                     AAELLRVADFGLPTGVIFDWVNAPEPVLHQMWEPVWAAAAATGLPVNLHANPSGGSRQ
                     MGVGVTTAQPRNQALMRVANFPMGAMGELMSAVVFSGICDRHPGVRFVLEEAGVGWVP
                     FLFWRFDREYDFGGPDSRVFKPDIELSKKPTEFVKRQLFFTFEVEEEGGFRRVPEIGL
                     TNFLWASDFPGLDSPWPHSKAMGHAPAEAALGKEALHQLVFDNAVNLYKIPVTLPQER
                     ART"
     gene            2720..2887
                     /locus_tag="VGQ24_09870"
     CDS             2720..2887
                     /locus_tag="VGQ24_09870"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HEV8455188.1"
                     /translation="MAVVDPELRVHGIAGLCVADAAIMPTVVSGNTNAATIMIGERVA
                     DLVREQLRLAA"
     gene            2956..3348
                     /locus_tag="VGQ24_09875"
     CDS             2956..3348
                     /locus_tag="VGQ24_09875"
                     /inference="COORDINATES: protein motif:HMM:NF020457.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DOPA 4,5-dioxygenase family protein"
                     /protein_id="HEV8455189.1"
                     /translation="MTEKTAKSVNNLGYHAHIYYDPTSTRAVAEGVCAALGENFQVEI
                     DAFRDTPIGPHPIANVLVIFKPDQFEHVVPYLMLHRDGLDVLVHPLTEDAVEDHTDFA
                     MWLGKPVELKIHTLPHGRGGRLPSGVSA"
BASE COUNT          636 a         1186 c         1141 g          628 t
ORIGIN      
        1 tgccgcatcg tgaaagaccg aatccggctg tggaaggacg gcgtccacga tctcgtgatg
       61 gagctctgtt gtgctctgca taacttccgg gtccgtctca ccccctggca accgatggtt
      121 taatcgggat aaactcaact gtacaccgga atgcaatgga agtgtttccc cgtacgcaaa
      181 gaccgcgacg gcacagcgac aatccatgaa ctggctgcga gttttcagga gtcccgacgc
      241 ggcatacctt ggctatggtg gaggccacga gtggctgacg agggcgccgt cagaaaaatg
      301 cgtggcacgc tggggcagcg cgtacgacac acgctcttat tggattccgg ggtcttaggc
      361 tcccgcgttg tccgagaagc gcaactcctt ttgaaggcta ttgaaaaaga agggcttcaa
      421 ggaggagagc atgacaaaag tccggttgta cgccctcggc acatccacga ccctggaatc
      481 caacaagagc gtcaggttat tcacgtctat ccgtatgacg acctcgcgca gcggacggcc
      541 gtccgcgagg cgttggcgaa ggacaccgcg cgggcgcaga tacccggcgg cggggagttt
      601 atcgtggcgc aggaggccga gatcatgatc ccagcgccgt ttatgcgccc cttgggcagc
      661 cgggattacg ggagtgggaa cgtgtatgag atgcgcatct atacctacga acccggccag
      721 atccccaagg tcctagaggc gtgggccacg gccattcccg accgggagaa gttttcgccc
      781 ctggcgacct gctggtatag cgagctcggg ggattgaaca agttcgtcca cacctgggtc
      841 tacaaggatc tcaacgagcg tgcctgcgtg cgcgaggaag cccgcacgag cggcggcgcg
      901 tggccgcccc aggccggcgt gcggccgatt cggcaggaca acaagctgct cgtgccggcg
      961 gccttctcgc cggtgcggta gtcgcccgac gtgacgagcg caccgcgttc ctcctgggcg
     1021 agcctggcct gtgggtccga cgtcccgccc aggcgttctc ccgtcggtgg tgttcccgct
     1081 ctggacgtga gcagatatct accttggatt gaccgccacc tggagctcct cacatccatc
     1141 tctggcacac cacctcctgc gcattaggtg cgcgcacgct cttgaggcag tgtgaccgga
     1201 atcttgtaca ggttgaccgc gttgtcgaag accagttgat ggagcgcctc tttcccgaga
     1261 gccgcctctg ccggagcatg tcccatcgcc ttggagtgtg gccacgggct gtcgagcccg
     1321 gggaagtcgc tggcccaaag gaaattcgtg aggccgattt cgggcacgcg ccgaaagccg
     1381 ccctcttcct ccacctcgaa ggtgaagaag agctgccgtt tgacgaactc ggtgggcttc
     1441 ttggacagct cgatgtcggg cttgaataca cggctgtccg gtccgccgaa atcgtattcg
     1501 cggtcgaagc gccagaacag gaacggcacc cagccgacgc cggcctcttc cagcacaaag
     1561 cgcactcccg gatggcggtc gcagatgccc gagaagacga cggcgctcat cagttcgccc
     1621 atcgcaccca tcgggaagtt ggcgacccgc atcagcgcct ggttgcgcgg ttgcgcggtg
     1681 gtgacgccga cccccatctg gcgcgacccg ccgctcgggt tggcgtgtaa gttgaccggt
     1741 agccctgttg cggcggcggc cgcccagacc ggctcccaca tctggtgcaa gaccggctcg
     1801 ggagcgttca cccagtcgaa gatgacgccg gtcggaaggc cgaaatccgc gacccgcagg
     1861 agctcggccg cagcctcctc gggcgtctgg cagggccgcg gcagcagcat gataaaccgg
     1921 ccgtccgact ccgcgtagag ctcgcgcgcc caatcattga ccgcgcggac gcaggcgatg
     1981 cgcagctccg ggtcccggat cgccgctatg tgctcgtacg ggccgttgac gagctcggcg
     2041 tcgacgccgt cgcggtccat gtcttcgcac cggtatttgg cattggcggc gcggaagacg
     2101 ccgggttccg gctcctccgg aaggccggcg cgcgtatagc aattgaccgg cccccggccg
     2161 accccggccc acccaacccc gctccagacg cgtccctcga caacccattg gcgcgtgccg
     2221 tccggaccct cgacgacccg cggcccgttc tcgaggagct ttctcggcag acgttttgtc
     2281 cacaaatcga acggcaggtg catcagccgg cagtgcccat cggcggaaat gaccccaaat
     2341 tgcttctcca tggcgcgctc cttcctctca cagctcagcg cttgctgcga ccttgatctt
     2401 cgagatattc cttcaacgcg acggcgttgt tgcgcccccg ccttgccacc cgtcccgcgg
     2461 ctgtcacccc agggcacccc tgcggcgcga tcctaccccc tcctgcgccc cctgtccagc
     2521 cccagtcgcg cggcgccgcg ctccgcctgg ctgcaggccg cgccggcggg cgggggcggc
     2581 acgcagggtg ggcacgccag cgcccagggt gcagcggggc cggcggcggg gcatgctggg
     2641 gcgggcgggg cgggcggggt ggcgcaaaaa gtgctttaaa cttcctatcc gctgctttaa
     2701 acttcctatc cgcgacgcca tggccgttgt cgaccccgaa ctgcgcgttc acgggatcgc
     2761 cgggctgtgc gttgccgacg ccgcgatcat gccgaccgtg gtttccggca acaccaacgc
     2821 cgcgacgatc atgatcgggg agagggttgc cgatctggtt cgcgagcaac tgcggctcgc
     2881 ggcatgactt ttcccgcagg gagcgctgtg caaaactgtt gcaagccatc gtcagccagc
     2941 agggagcgaa gcccgatgac cgagaaaact gcaaaatccg tcaataactt gggctatcac
     3001 gcccacatct actacgatcc gacaagcaca cgcgccgttg ccgaaggggt gtgcgcggcg
     3061 ctcggggaga atttccaggt cgagatcgat gccttccgcg acacgccgat cgggcctcac
     3121 ccgatcgcca acgttctggt cattttcaag cccgaccagt tcgagcatgt ggtgccctac
     3181 ctgatgttgc accgcgacgg gctcgatgtc ctcgtccacc cgctgaccga ggacgcggtg
     3241 gaggaccaca ctgatttcgc gatgtggctc ggcaagccgg tcgaactgaa aattcacacg
     3301 ttgccccacg gtcgcggcgg gcggctgcca agcggcgtca gcgcttagcg ctggaggatg
     3361 aaggcgacgc cgccagccgc aaggccgact ttagccgcgc tcgtagccga tcttgcagcc
     3421 gggggtcatg tacctggccg ctgcgggtaa atacctcagg ctcactcgtc gactgtcata
     3481 gggacaaaaa ggcatagatg aagagactct catggcctcc cagcggccct ctgccccatg
     3541 gtgacggcct cgcagcgagc tgtgtggacg cacgtcgcct gctcaggccc c
//
LOCUS       DASYRV010000375         2267 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_987317, whole genome shotgun sequence.
ACCESSION   DASYRV010000375 DASYRV010000000
VERSION     DASYRV010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_987317"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..434)
                     /locus_tag="VGQ24_09880"
     CDS             complement(<1..434)
                     /locus_tag="VGQ24_09880"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEV8455190.1"
                     /translation="MPSLLALLFGALLATTLPAQSGTRVVMLGTGTPNPDPGRSGPAV
                     AVVVNGTAYLFDAGTGVMRRAAQAAGNGIDALLAPRIGLVFLTHLHSDHTIGLPDVIH
                     TGWIAGRARPLRLFGPPGTVELARHLTEAWSADIANRTHGLQP"
     gene            complement(458..1981)
                     /locus_tag="VGQ24_09885"
     CDS             complement(458..1981)
                     /locus_tag="VGQ24_09885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEV8455191.1"
                     /translation="MKAALTLLTLLTVFTGSAPAQGARAVQHGVRPARFAIRNAMVVE
                     GNGTPAAGPYDIVIEGNSIAELVALDPVALKAGRARRPAADAELDATGKYVLPGLINL
                     HGHVQEERGGVPQPLEYELKLWLASGITTVRDVGSTTRKTLELRSRSAAGTVAAPRIF
                     VYAMFAGGGDAVESRGIRTTEEARTRVRALKTLGVDGIKIVGIDRDLMQAMEDEAKKV
                     GLPIAHHAGVEETNAWDDVKFGTRSIEHWYGVPDAALSDGVQRFPSSYNYNNEVDRFR
                     WAGRLWREADPERLGKVLQAMADANVAWTPTLVIYEASRDLLRAQNQPWFADYLHPTL
                     EEYFRPNPANHGSYFIGWSSTDEAYWKENYRIWMAALRDFERRGGVIGAGEDAGFIYQ
                     LYGFGLIRELELHQEAGFHPLQVIRHATFNNARILGMEDRLGRVRPGHLADLIVVNGN
                     PLEDLKLLYATGTETIRDGKAVHTGGVEWTIKDGIPYHGPTLLREVKELVAAARAKP"
     gene            complement(1978..>2267)
                     /locus_tag="VGQ24_09890"
     CDS             complement(1978..>2267)
                     /locus_tag="VGQ24_09890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455192.1"
                     /translation="FIARRWVQMFPPDVPVEAVVVLTPGSYWDPMSIALHGTPHDDDS
                     HVPILFFGGPFKPGRYSQFVRTVDIAPTLAQVLGAPPTEPLDGRVLTAAIK"
BASE COUNT          354 a          751 c          764 g          398 t
ORIGIN      
        1 ggctggaggc cgtgagtccg gttggcaatg tcggcgctcc atgcctcggt caggtgccgg
       61 gccagctcga cggtgccggg agggccgaag agccggaggg gccgcgcccg cccggcgatc
      121 cagccggtat ggatcacatc cggtaatcca atggtgtgat cggagtgcag gtgggtcaga
      181 aagacgaggc cgatgcgcgg cgcgagcagc gcgtcgatgc cgttgccggc ggcctgggcc
      241 gcgcgccgca tcaccccggt acccgcatcg aagaggtagg cggttccgtt cacgacgacg
      301 gccaccgcgg ggccggagcg cccaggatcc ggattgggag taccggtgcc cagcatgacg
      361 actcgggttc cgctttgcgc cggcagagtc gtcgccagca acgcaccgaa caggagagcc
      421 agtaggctcg gcatcgctcg gggtatttcg cggacgctca gggttttgcg cgtgcggccg
      481 ctaccagctc ctttacctcg cggagcagcg tcggcccgtg gtaggggatt ccgtctttga
      541 tggtccattc aacgccgccg gtatgcaccg ctttcccatc ccggatggtt tcggtaccgg
      601 tggcatagag cagcttgaga tcttcgaggg ggttcccgtt caccacaatc aggtcggcga
      661 gatggcctgg acgcactcga ccgaggcggt cctccattcc caggatccgg gcgttgttga
      721 aggtggcatg ccggatcacc tggagcgggt gaaagccggc ctcctgatgc agctcgagct
      781 cgcggatcag cccgaagcca tagagctggt agatgaaccc ggcgtcctcg cccgcgccga
      841 tgaccccgcc gcgccgttcg aaatcgcgca gcgcggccat ccagatccgg tagttctcct
      901 tccaatacgc ctcgtcggtt gagctccagc cgatgaagta ggacccgtga ttggccgggt
      961 taggccggaa gtattcctcc agcgtcggat gcaggtagtc cgcgaaccag ggttggttct
     1021 gcgcccgcag cagatcccgg ctcgcctcat agatcaccag ggtcggggtc caggcgacgt
     1081 tcgcatccgc catcgcctgc agcaccttgc cgagccgctc cggatcggcc tcgcgccaga
     1141 gccgtcctgc ccagcggaat cggtcgacct cgttgttgta attgtagctc gaggggaagc
     1201 gttgcacgcc gtcgctcagg gccgcgtcgg gcacgccgta ccagtgctcg atgcttcggg
     1261 tgccgaactt cacatcgtcc caggcgttgg tctcttccac gccggcgtgg tgcgcaatcg
     1321 gcagcccaac ctttttcgct tcgtcctcca ttgcctgcat caggtcccgg tcgatcccga
     1381 cgattttgat gccgtcgact cccagggtct tgagtgcccg gactctcgtc cgggcctctt
     1441 cggtggtccg aatgccgcgg ctctcgaccg cgtcgccacc gcccgcaaac atcgcgtata
     1501 cgaaaatccg gggcgctgcc accgtgcctg ccgcactccg cgaccggagc tcgagggtct
     1561 tgcgcgtcgt gcttcccacg tcgcgcacag tcgtgatgcc cgacgcgagc cagagcttga
     1621 gctcatactc gagcggttgc ggcaccccgc cgcgctcctc ctgcacgtgg ccatggagat
     1681 tgatcagccc gggcagcacg tacttccccg tcgcgtcgag ctcggcatcg gctgcgggcc
     1741 ggcgcgcgcg gcccgccttg agcgccacgg gatcgagcgc gaccagctcg gcgatactgt
     1801 tgccctcgat cacgatgtca tagggacccg ccgccggggt tccgttcccc tccaccacca
     1861 tggcattccg aattgcgaac cgggcgggac gtaccccatg ctggaccgcc ctggccccct
     1921 gcgcgggagc gctccccgtg aagacggtga ggagagtgag gagggtgaga gccgccttca
     1981 cttgatcgcc gccgtgagga ctcgtccgtc gagcggttcg gtcggcggag cgccgagcac
     2041 ctgggccagc gtgggagcga tgtctacggt gcggacgaac tgggagtacc gaccgggttt
     2101 gaagggcccg ccgaagaaca ggatcggcac atggctgtcg tcgtcgtggg gcgttccgtg
     2161 cagggcaatg ctcatgggat cccagtagct gccgggagtc agcacgacga ccgcctcgac
     2221 cggtacgtcg ggcgggaaca tctggaccca gcgacgggcg atgaagt
//
LOCUS       DASYRV010000376         5184 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1814193, whole genome shotgun sequence.
ACCESSION   DASYRV010000376 DASYRV010000000
VERSION     DASYRV010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5184
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1814193"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..545
                     /locus_tag="VGQ24_09895"
     CDS             <1..545
                     /locus_tag="VGQ24_09895"
                     /inference="COORDINATES: protein motif:HMM:NF019285.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nucleoside transporter C-terminal
                     domain-containing protein"
                     /protein_id="HEV8455193.1"
                     /translation="RKVKLDMPKQDVNLLDAAARGTSEGLNLMLNVIAMLVSFVALVA
                     LLNGGFAAVHRYAEWFPANLQTVLGWIFQPIAWLMGVPGRDSGTIGSLLGTRMVLNEF
                     IAYAQLGPLKAQLDPRSFTIASFALAGFANFSSVGIQLGGIGALVPERKRDLARLGIR
                     AMLAGTLANFLSATIAGILL"
     gene            542..1387
                     /locus_tag="VGQ24_09900"
     CDS             542..1387
                     /locus_tag="VGQ24_09900"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: protein motif:HMM:NF006054.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004731 - purine-nucleoside phosphorylase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HEV8455194.1"
                     /translation="MKEVGQRGGGADVTKVNAAAALIRDRLGSSRPRIAVVLGSGLGF
                     LTEHIEDPVTIPYGDVPGFPKTTVIGHGAELVAGRLAGKEVLTQSGRFHLYEGHDAAT
                     TALPVRAFAALGIETLILTNAAGGIRRTFSSGTVMLIADHINLTFRNPLFGPVLPGEE
                     RFPDMSDPYDKALRALAREVSRTKRIALDEGVYIQLLGPSYETPAEIRMADRLGADAV
                     GMSTAVEVIAARARGVRCLGFSVVTNLASGISPTKLNHAEVMETANRVRHELAGLVEG
                     VIERL"
     gene            complement(1371..2165)
                     /gene="thiD"
                     /locus_tag="VGQ24_09905"
     CDS             complement(1371..2165)
                     /gene="thiD"
                     /locus_tag="VGQ24_09905"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEV8455195.1"
                     /translation="MKIALTIAGSDSGGGAGIQADLKTFHQFGVFGTSVIVALTAQNT
                     LGVRAVEVVPEAMVRAQLIALAEDLPPAALKTGMLAEAGLVRQVARAIRENGWAPLVV
                     DPVMVASCGVRLLSAEAEEVIREDLLPLAALVTPNLDEAAILTGRIVHDPPTMERAGA
                     TLLRFGAGAALVKGGHLAGDEITDVLVTPDGVRHFTRPRIDANLHGTGCTLSAAITAG
                     FALGWPLEAAVANGLDFVHRAIAAAPGLGSGFGPLNHTVDAPKAAR"
     gene            2181..2963
                     /locus_tag="VGQ24_09910"
     CDS             2181..2963
                     /locus_tag="VGQ24_09910"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEV8455196.1"
                     /translation="MSSSLQTLIRDLHRRRGRERRGLALAEGVRLVEEAVASAVILRG
                     AAASPALESTTRGKALKATLLTRGVQVEELTDAELEGLADTEHPQGIIAVIEPKRWTL
                     GDISMNPGATILVLDGVQDPGNVGTMLRTALGLGAAGLVALKGTADLTNSKVIRGGMG
                     ASFRLPAVTASSDEFVAWVRLQRAQIWVADAAGEAGDRLSARRADRPAVALVVGNEGA
                     GVGPSLDAAADRRIAVPLARGVESLNVAVAAGILLYEVTRVS"
     gene            2953..3747
                     /locus_tag="VGQ24_09915"
     CDS             2953..3747
                     /locus_tag="VGQ24_09915"
                     /inference="COORDINATES: protein motif:HMM:NF013632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEV8455197.1"
                     /translation="MSADRQLTGLSIVYAGLLGAVIGSFLNVCILRWGADPKQSVVRP
                     RSRCPRCGRRLVWYDNIPIISWLLLRARCRGCGEPISFQYPLIELATACIWAYMVWWS
                     GPTLEAVRGAVFGTILLGIAMTDARAYIIPDEFTWGGLVIGLVFSAAGAGLSGLATAA
                     LGAAVGFGLLWLVGTAGTWLFKEDAMGGGDIKMMAMVGAFVGWQGVLLTVFLGAFIGS
                     LIFLPLLLAGRKKLVPFGIFLSLGAAATYLVGPRLVTWYGRLLTGA"
     gene            3744..4946
                     /locus_tag="VGQ24_09920"
     CDS             3744..4946
                     /locus_tag="VGQ24_09920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455198.1"
                     /translation="MRSRHRTLLVIAVSLVSCRGEAPKGSSPDLLKHLVDSLQAPVER
                     VTGLRFKSPPRSALRSREQVRDYLIRKLDEELPPPRMQGLQTAYRLFGLLPDTLELRS
                     LLLDLYTEQVAGYYDPDSATLFGVVGADPTQLRLVLAHEMVHALQGQYLPLDSILHEP
                     ANNDRLTAAQAVLEGQATLASIDVLASGQNLSSSPEFWDLYREQVREQQSSMPVFAKA
                     PLIVREALIFPYLAGAEFMHWWKESERDSVPYGPRMPVSTEQILFPERYVRGDAPVTL
                     AFPPDPGIVYEDVLGEGEIRVLMSQLAGSSEVRSRGPIGWGGDRYRVYATPAGPALVW
                     YVVWDDPRSADRFLWGYGGKLRSTARKGYRTVLENLELGGKPATMYVLAPDGWNGWGQ
                     VPKAFVSR"
BASE COUNT          807 a         1651 c         1781 g          945 t
ORIGIN      
        1 atcggaaggt caagctggac atgcccaagc aggacgtaaa cctgctcgac gcggcggcgc
       61 gcggtaccag cgaaggcctg aacctgatgc tcaatgtcat cgccatgctg gtctcgttcg
      121 tggcgctggt ggccctgctc aacggcggct tcgcggcggt tcaccgctat gccgagtggt
      181 tcccggccaa cctccagacg gtgctcggct ggatcttcca gccgatcgcc tggctcatgg
      241 gcgtgcccgg gcgagacagc ggcacgatcg ggagcctgtt gggcacccgt atggtgttga
      301 acgagttcat cgcctatgcc cagctgggac ccttgaaggc gcagctggat ccgcggtcgt
      361 tcaccatcgc gtcgttcgcc ctggcggggt tcgccaactt cagctcggta ggcatccagc
      421 tcggtggcat cggcgcactg gtgcccgagc ggaaacggga cctcgcccgg ctcggtattc
      481 gcgcaatgct cgccggcacc ctggccaact tcctgtcggc tacgattgca gggattctgt
      541 tgtgaaggag gtggggcagc ggggcggcgg ggcagatgta accaaggtga atgcggcagc
      601 tgccttgatt cgggatcggt tgggaagcag ccggcctcgg atcgctgtcg tgctcggctc
      661 cggtctgggc tttctcaccg agcacatcga ggaccccgtt accatcccct acggcgatgt
      721 ccccggtttt cccaagacga cggtgatcgg tcatggcgcc gagctcgtgg ccgggaggct
      781 cgccggcaag gaggtcctca cccagagcgg ccggtttcat ttatacgagg gccacgacgc
      841 ggccaccacg gccctcccgg tccgcgcatt cgccgctctt ggtatcgaga cgctgatcct
      901 caccaacgcc gccggaggca tccggcgcac cttttcatcc ggcacggtga tgttgatcgc
      961 ggatcacatc aatttgacct ttcgtaatcc gttattcggg ccggtgcttc caggagaaga
     1021 gcggttcccc gacatgtcgg acccatatga caaggcactc cgggcactgg cccgtgaggt
     1081 gtcgcgtaca aagcgaatcg ccttggacga gggggtgtac atccagctgc ttggccccag
     1141 ttacgaaacc ccggccgaga tccgaatggc agaccggctg ggtgcagatg cggtggggat
     1201 gtccactgcg gtggaggtga tcgccgcgcg ggcgcgggga gttcggtgcc tcggcttttc
     1261 ggtggtgacc aacctcgcct ccggcatctc acctacgaaa ctcaatcatg ccgaggtgat
     1321 ggagactgcc aaccgggtgc ggcatgagct ggcgggcctg gtcgaaggag tcatcgagcg
     1381 gctttaggcg cgtccacggt atggttgagc gggccaaacc cggaaccgag tccgggagcc
     1441 gccgcaatgg cccggtgcac gaagtccagc ccattcgcca ccgccgcctc caggggccag
     1501 ccgagcgcaa agcccgcggt gattgcagcg gagagggtgc aaccggtgcc gtgcagattg
     1561 gcgtcgatcc gcggccgggt gaagtggcgc acgccatccg gagtcaccag cacgtcggtg
     1621 atctcgtcgc cggcgagatg gcctcccttc accagggctg caccggcgcc gaagcgaagc
     1681 aacgttgcgc cggcgcgctc catggtcggc gggtcgtgca cgatgcggcc ggtgaggatc
     1741 gcggcctcgt ccaggttcgg agtcaccagc gcggcgagtg gcagcagatc ctcgcggatg
     1801 acctcctcgg cctcggcgct gagcagacgg actccgcagc tggcgaccat gacggggtct
     1861 actaccaggg gtgcccagcc gttctcgcgg atggcccgcg cgacctgccg gaccagaccg
     1921 gcctccgcca gcatccccgt cttgagcgcc gcgggtggaa gatcttcggc cagggcgatg
     1981 agctgcgcgc gcaccatggc ctcgggcacc acctcgacgg cacgaacccc cagggtattc
     2041 tgcgcggtga gggcgacgat gacggaggtg ccgaatacgc cgaactggtg gaaggtcttg
     2101 agatcggcct ggatgccggc accaccgccg gaatccgagc cggcgatagt gagcgcgatc
     2161 ttcatcgggt gagcctctcc atgagcagct cccttcagac gctgatccga gacctgcacc
     2221 gccggcgtgg gcgggagcgg cgtggcctgg ccttggcgga aggcgttcgt ctggtcgaag
     2281 aagcggtcgc ctccgcggtg atccttcggg gggctgccgc ctccccggcg ctggaaagta
     2341 ccacccgcgg aaaggcgctc aaagcaaccc tgctcacacg cggtgttcag gtcgaagagc
     2401 tcacggacgc cgagcttgag ggtctcgccg acaccgagca cccgcaaggc atcatcgcgg
     2461 tgatcgagcc gaagcgctgg acgctcggcg acatcagcat gaatccgggc gccaccatcc
     2521 ttgtgctcga tggggtgcag gacccgggca acgtcgggac gatgctgcgg accgcactgg
     2581 ggctgggagc tgctggactc gtagcactca agggcacggc cgatctcacg aactccaaag
     2641 tgatccgcgg cggcatgggc gcgagctttc gcctgccggc ggttaccgca tcttccgacg
     2701 agttcgtggc gtgggtccgg ctccagcggg cgcagatctg ggtggccgac gccgctggcg
     2761 aagccgggga tcggctgtcg gcccggcgtg cggatcgacc agccgtggcg ctggtcgtgg
     2821 ggaacgaagg tgccggcgtc gggccgtcgt tggatgcggc cgccgaccgg cggatcgcgg
     2881 tcccgctggc ccggggcgtg gagtcactca acgtggcggt cgccgccggg attctcttgt
     2941 acgaggttac tcgtgtcagc tgatcgacag ctcaccggac tgtccatcgt ctacgccgga
     3001 ttgctgggcg cggtcatcgg cagctttctc aacgtatgca tcctgcgctg gggcgccgat
     3061 ccgaagcaat ctgtcgtccg gccgcggtcg cgctgcccgc gatgcggccg gaggctggtc
     3121 tggtacgaca atatcccgat aatctcgtgg ctgctcctcc gggctcggtg ccgcggctgc
     3181 ggagagccga tctcgttcca gtatccgctg atcgagctcg ccaccgcctg catctgggcc
     3241 tacatggtct ggtggagcgg gcccacgctc gaagcggttc gcggggccgt gttcggcacc
     3301 atcctgcttg ggatcgcgat gaccgatgcg cgcgcataca tcattccgga cgagttcacc
     3361 tggggcggat tggtcatcgg gctggtgttc agcgcggctg gagccgggct gagcggactc
     3421 gccactgccg cactcggcgc tgccgttggg ttcggcctgc tctggttggt cggcaccgcc
     3481 ggcacctggc tgttcaagga agacgcaatg ggtgggggcg acatcaagat gatggctatg
     3541 gtgggcgcgt tcgtcggctg gcagggggtt ttgctcaccg tgttcctcgg cgcattcatc
     3601 ggcagcctga tcttcctccc gctgctgctg gccgggcgca agaagctggt gccattcggg
     3661 atcttccttt ctctcggtgc ggcggcgacc tatctcgtgg ggccgaggct ggtgacgtgg
     3721 tacggccggc tgctgaccgg cgcatgagat cacgacatcg gacactcctc gtcattgccg
     3781 tatccctcgt ctcctgccgg ggtgaggcgc cgaagggctc atcgcccgat ctcctgaagc
     3841 atctggtgga cagcctacaa gcgccggtgg agcgcgtcac cggattgcgt ttcaagtcgc
     3901 caccgcgatc ggcgctccgt agtcgcgagc aggtgcgcga ctatttgatc cgcaagctcg
     3961 acgaggagct gccacctccc aggatgcagg gtctccagac ggcgtatcgc ctgttcgggc
     4021 tgctgccgga cacgctcgag cttcgctcgc tcttgctcga tctctacacc gagcaggtag
     4081 ccggctacta cgacccggac tcggctacgc tgttcggggt ggtgggcgcc gaccccaccc
     4141 agctgcgcct ggtgctggcc catgagatgg tgcacgcgct tcaggggcag tatctcccgc
     4201 tcgactccat actgcatgag cctgcaaaca acgaccggct caccgccgcg caggcggtgc
     4261 tcgagggaca ggccacgctt gcatccatcg atgtactggc gtccggccag aacctatcga
     4321 gcagcccgga gttctgggac ctgtaccgcg aacaggtgcg ggagcaacag tcctcgatgc
     4381 ccgtctttgc caaggcaccg ctgatcgttc gtgaggccct gatcttcccc tatctcgccg
     4441 gtgccgagtt catgcattgg tggaaggagt ccgagagaga ctcggttcca tatggccccc
     4501 ggatgcccgt ctcgaccgag cagattctgt ttcccgaacg ctatgttcgg ggcgacgcgc
     4561 cggtcacgct cgcgtttcct ccggacccgg gcatcgtgta cgaggacgtg cttggcgaag
     4621 gtgagatccg ggtgctcatg tcgcagctcg ccggatcttc cgaggtcaga agcagaggcc
     4681 cgattggctg gggaggggac cgataccggg tgtacgctac cccggcgggg ccggcgctgg
     4741 tctggtatgt cgtgtgggac gatcctcgat cggcggaccg cttcctctgg ggctatggcg
     4801 gcaagctgcg atcgactgcg cgtaaaggtt atcgcaccgt tctggagaac ctcgagctgg
     4861 gcggcaagcc cgcgacaatg tatgtgctcg cgcccgacgg gtggaatggc tggggccagg
     4921 tgcccaaggc gttcgtgagc cggtagccgg aaattcggac gcgcccgcct tcggcgggct
     4981 tttgttattt cattggcctc gatgccaagc cggcccatga gggccggcct cttgttttgg
     5041 cgcggtcctc cggaccgcgg gcactccgcc cacggtcagg tttcccctgg cctgacatct
     5101 aggcggttcc atcgggataa tgaggagggt ttaccgctca tggagcatcc gcggtccgga
     5161 ggaccgcgcc caacgaagag gccg
//
LOCUS       DASYRV010000377        13225 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2228184, whole genome shotgun sequence.
ACCESSION   DASYRV010000377 DASYRV010000000
VERSION     DASYRV010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 13225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13225
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2228184"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..883
                     /locus_tag="VGQ24_09925"
     CDS             <1..883
                     /locus_tag="VGQ24_09925"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="S8 family peptidase"
                     /protein_id="HEV8455199.1"
                     /translation="VRVEPDGIATIVTTQSGATWGLDRIDQPARPLSGTYSYNNTGAG
                     VTAYIIDTGIRFGHNEFGGRATSGFDAVDGGTADDCNGHGTHVAGTVGGSVYGVAKAV
                     SLVGVRVLNCSGSGTWSGVIAGMDWVTANHSGPTVANMSLGGGANSSVDQAVRNMIAS
                     GVATAIAAGNGNPGGRAQDACKYSPARVTEAMTIGATSSSDAKASWSNYGNCVDWFAP
                     GVGITSAWATSNTATNTISGTSMATPHTAGVVALYLQSHLSATPSQVRDALSANTTKN
                     VVTSSKTVNNDLLFSNY"
     gene            1005..1496
                     /locus_tag="VGQ24_09930"
     CDS             1005..1496
                     /locus_tag="VGQ24_09930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455200.1"
                     /translation="MRYLFCTTLALAACGRAETARDTRASDTAAMGAPDTAAPAQTMS
                     AVPDRLLGSWTAKGYDAGSTRPQRFNITWSRAPEGGLTGVIAFQPGETYNVKVVSTDD
                     STIVYESEPHRSPTLKGQVVTRTTAKMVGDSLTGTYEARATAGGKVLRGRFTATRGSA
                     PSQ"
     gene            complement(1506..3641)
                     /locus_tag="VGQ24_09935"
     CDS             complement(1506..3641)
                     /locus_tag="VGQ24_09935"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEV8455201.1"
                     /translation="MSLTALALLAAVGAPLPAQDALSLVGPRTEVKAIEFRFEGKRTV
                     PEKELRRIIALTARGGMVGIRRFFGFLPFVSPIGVHPFDPLELQRDVVRLRNHYQRSG
                     FLKADVKDDVQYDAKSDLVKVAYVIDEGPPLLVRSLRFVGDNGGLSLPPKLARDWTSF
                     VRQQQRKADRFGRDEERELADSTTRWLRDRGYPFAAADPRAAVDTAADRADVTVLVRP
                     GLRARIREIAVSGNHGIPARHVTRQLPVRPGDWYDAGELEKGRQQLVQLDLVRLALLD
                     VPRESADDSSVVVRLDVTENPPRLVRGEAGLASGGGLSGEVEWTHRSFLGGLRTFSAA
                     ASAQTGALSFETPAQQLYRLALTVFQPYVGDRRLSAAVGPFVEYRNDLRDRSRAVGFE
                     SSLAYAAGPLRSISLGYSLSHRRILDYGFGENLDPIEYLPLLGLADSAAAGRLGKDRN
                     RSAITLQGSYGRLDQFANPRRGYVLRPRIEITTPGGFNTSEYLLIDLGATAFLPLTSR
                     VGFTLRVGAGRIYPFGRSVRQITEESPFVSLLRLGDVTFTAGGTRDVRGWGSQLVGPK
                     LPEVRLESQDGQTRTVAERYAPVGGLARLLGSAEVQLPLPGFSDAWQTFLFFDSGRVW
                     TPDSRFALNAGELDQDDYFASVGAGIGYETVVGAIQFAVGYKLNPSALDLRSPQGVLD
                     ALEEGRPLSSVPTEPRRRLHLHFSIGSTF"
     gene            complement(3643..8715)
                     /locus_tag="VGQ24_09940"
     CDS             complement(3643..8715)
                     /locus_tag="VGQ24_09940"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HEV8455202.1"
                     /translation="MSSRAERRWTRRLAATGIILLTLLVGVLALLQLPPVATWMVRRL
                     VTVIPLNPGYRLKVGRVSGDWLHRLALDEVRLVRNNRELARVDRLKVEYDLRHLRGAK
                     RRLRELTVEGARGVARREGDSWDLADALRRSADTTRSGGEFTLEQLDLRDVELVAELA
                     PDSALRVRGLNLHARDLVIGTQVLVRVDQLNAAVAPPGSGRWFAVATRGAVTGDEFRF
                     NPVRIQTEQTDVAGWVVLPRSLDDPRLVDRLDLGIKAMPLALADLAAVAPGVTPEGDL
                     RVEARAQGNVDGLVTARLGARLDEATLTLSGAAPLAKGAADYRLNGAIRRLDPSRLYR
                     AAPSGSLNGKVEADLLGSTLARADGSVDLRLAASRLAGMALERVDLHADLRGGSAALR
                     LRGVAEGGTLTVTGRVRPFDSVPEYRLAGAASGLPGSDAIARALAGESGEPRLDLRFQ
                     LAGAGWSPITGRLTGRLDLTALRRDGDSVPLGHSTLTLARGRLEARPELLVAGGRVSA
                     DAIAHLGDTVTYEVRRGRIDRVNLGRLLGDTAVAPLSGRFALAGRGVAPDAAVASLRI
                     ELDELRYGARHVEQVNGLARLDRGRARIDVRGTLQGGRLAIDADARPFDSTAAFHLRS
                     ASIERVDLGTFLGRPDLAGPVSLRASGTGRWRGGARSLDGRVTVDLSRLGRIEVTAGS
                     FIARLRGDRLTYDGSLRTNAGALALAGEGRPLAELPWLAIRRGRADSLDLGTLLGRPD
                     LRTGVNARFTGTMTQGSADSTQGRLAVDLLPSHFNQAQLTGGQVGLELERGVVRGDLR
                     LAGPDGELGAKLSGRLGDIKQVHTDGTLRLERLARWTGRPDADGRLEARFILEASGDS
                     TGLISLGGTIDAIGGVGRMRLHTLHLSLRPDFGAIQVDTVFVRSNVAALDGGGRVALR
                     ESAGVDTLRVTATAADLAPLAALVGAADSVTLDSGRVALTVSGPAQHWRIDGKAEVHR
                     ILSVGNLAELMTVQASAAVDSTGVSAAVGEVRVEDAAYGKVRIPDARLAGRYDSLITV
                     EANVTVGDSMRLVAGLRGVVGPDTVRAVLHRLDLSEGGRAWSLEQPAELMLRPNLLVD
                     GLALHAGPRRIIVDGTFDPRHSSDIAIRLTDVDLDVLREVKLTPIGGRLDGWLRFAGP
                     AAGPTLEGSLGLTIRRRKGSEIGRIRTDLGWSRAGLRVDATAAPQKGGRLTVNGTLPW
                     RLTLAPADTTTGIGTVRASADTLALAVRADSFDLGLFEPLLPPETARELRGRLVADTR
                     VSGTPDAPRANGTIQVTGVALTLPTMGLRYRGGELIGRLAGDELRIDRLRLRTGKKEI
                     LTAQGNVRLRPLNDPSLDLTAELTKFRISNSSSLQSVASGQLRLGGTAEAPFLTGRLT
                     MGRTDIVVGGGQAAATVEKVELTPEDLRQVARQFGPGVLARADKSPGLVDRFRLDLDL
                     RLPRRVWFRRRTSPKADIELSGRIRLRQEPGQPMQFFGRVEPVPGRGNLDVYGREFRL
                     TGGEITIAGPTDSTKLDVIAEYRVPTQGGPEDEGVLIEVAAKGRPDTLTLEFTGDPEM
                     SQDDMLSYILTGKPASDNPLAQRAEGGEGAGEMGAKLALSGVSQSLSTAAEKGLGLDV
                     FQIHQEGLHGLTLTAGRYVGSRVFLSLHLPIELGGDVQQMPGANLGPTFELEYEAQRW
                     LRANVRGGNVPPRFTLRSRYAY"
     gene            9142..11229
                     /locus_tag="VGQ24_09945"
     CDS             9142..11229
                     /locus_tag="VGQ24_09945"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEV8455203.1"
                     /translation="MPDLNTGLQGALSALTAIGIAVLVAAHRRARLGDEAKALEARGD
                     QLAQRWNEEHYPTPEDQVVNYATFMLDMLGRSLSWNAGIKRMLGYEKAEFIGLPLADL
                     YTSKDQADAAPERDLAEAGERGRVSTERWIVRKDGTRFPALVSTASVLDREGQVVGFA
                     ERLRDITEVRRVEEELGRSKEALDLANEAAGLGTWDHNLVTGELHWDARAKALFGLSS
                     DAPVTYPGWTEAIHPEDLLTAEEVLERALRDRQPFSTQYRVIWPDGSIHWLAVIGRAS
                     YGPGTGRPLRMRGILLDITERKRTEERLQEVMRLEAIGRLAGGIAHDLNNMLVAILGF
                     SDLLAQSMGGNDPRLEDVRQISEAAARSADLTRQLLAFARRELIQPRRLDLNSIVRYA
                     GGMLRPVLGENVRLVLQLSSTVGPIHADPGRLEQILMNLVLNSRDAMPQGGRVTVETA
                     GVTLESNGAAWQPQSEAPPPGRYAMLAVTDTGHGMDPATLQHIWEPFFTTKPAGKGTG
                     LGLSVVYGSVKQSGGFVWVDSEVGRGTAVRVYWPEVLQEAGQLGELPAPRPAERGRES
                     VLVVEDERVVRALIVRSLVRLGYRCVQAADAGEALQVLEQEEGHVDLVITDVVMPGIS
                     GGDLGLRLAERYPALPVLYTSGFADDDVIRRGLLDATRPFLQKPFNPAELGRKVREVL
                     DSPAVREHPVQNA"
     gene            complement(11279..11680)
                     /locus_tag="VGQ24_09950"
     CDS             complement(11279..11680)
                     /locus_tag="VGQ24_09950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455204.1"
                     /translation="MEPRVFAHSQTYRLRERMSDANIRHGQEVRADLPGIRVTAALDG
                     WRTAPDSNIGTIFFCTMGRIRIHEVLNQGDGDPLPSEVILDGLAVPGPGTYDILNALV
                     HSNGSLRVQVDSATRVVPRALDVQGVGGVIV"
     gene            complement(11847..11999)
                     /locus_tag="VGQ24_09955"
     CDS             complement(11847..11999)
                     /locus_tag="VGQ24_09955"
                     /inference="COORDINATES: protein motif:HMM:NF023180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3309 family protein"
                     /protein_id="HEV8455205.1"
                     /translation="MSTILIVILLLLLIGALPTWPHSRSWGYFPSGGLGLVLLILLLL
                     LLTGRI"
     gene            12218..>13225
                     /locus_tag="VGQ24_09960"
     CDS             12218..>13225
                     /locus_tag="VGQ24_09960"
                     /inference="COORDINATES: protein motif:HMM:NF040455.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HEV8455206.1"
                     /translation="MTRALLLASACVVVLLGAGGCRHDDPIAKAIRTTASNAVAPRSI
                     QGGRWKLLQLVYRDRDYRPLWMDGRKVRGQARDLIETLCHAEREGLRAADYDLAGLRT
                     DLARLRDEKDPAPRAVAALDLRLTRSFLDYGADLLAGRLDPQAVDNGWYIRARRAAID
                     SMLQESLRSRNFDDMIAPLRPRQREYKKLVDALEKYRELEGKGGWSLVPADKRLVRGD
                     EGASVGALRHRLHATGELRHAGGEPVYDDDVAAAVARFQERHGLPVDSSAGAATLAAL
                     NVPVESRIRQIELNLERYRWLPSDFGKRYILVNIPDYQLYAYDKGKEALTMRVIVGDE
                     YG"
BASE COUNT         2300 a         4432 c         4361 g         2132 t
ORIGIN      
        1 ggttcgggta gagccggacg ggatcgccac catagtcacc actcagagcg gggcgacctg
       61 gggtctagac cggattgacc agcccgcgcg tccgctcagc gggacctaca gctacaacaa
      121 caccggagcc ggggtcacgg cctacatcat cgataccggc atccggttcg gccataacga
      181 attcggcggc agggcgacga gcgggttcga tgcggtggat ggcgggaccg ccgatgactg
      241 caacggccac ggcactcacg tggcgggaac ggtaggtggg tctgtctacg gagtggccaa
      301 ggcggtatcg ctggtaggtg tgagggttct caattgcagc ggctcgggca cttggagcgg
      361 agtgatcgcc gggatggatt gggtcaccgc gaatcattcc ggtccaacgg tcgccaacat
      421 gtcgctcggc ggcggagcca acagctcggt ggaccaggcg gttcgcaaca tgatcgcctc
      481 tggtgtcgcc accgccatcg cggcggggaa cggcaacccg ggcggcaggg cgcaggatgc
      541 ctgcaagtac tcgcctgccc gggtgaccga ggcgatgacc atcggcgcca cgagtagctc
      601 cgatgccaaa gcgtcctggt cgaactacgg caactgcgtc gactggttcg cccccggcgt
      661 cggcattacc tcggcgtggg ccaccagcaa taccgccacc aacaccatca gcggaacgtc
      721 gatggcgacg ccgcacacgg cgggagtggt ggcactctac cttcagagcc atctatccgc
      781 tacgccgtct caggtgcgcg acgcgctctc tgccaacacc accaagaacg tcgtgaccag
      841 ttcgaagacg gtcaacaacg atctgctgtt ctcaaactac tgaccggctc gccggccagc
      901 cggcgaacct ccaagtcgat ccaggcgcca catcagatat tctggtgtgg cgctttcggt
      961 gtagaatgac atgttgaatg accacccgtt tctggagaga tgttatgcga tacctgttct
     1021 gcaccacgtt ggcactggcg gcgtgcggac gggccgagac cgcccgtgac acccgggctt
     1081 ccgataccgc agctatgggg gctcccgata ctgccgcacc agctcagacc atgtcggccg
     1141 tgcctgaccg cctcctcggc agctggacgg cgaaaggata cgacgccggc tccacccgcc
     1201 cgcagcggtt caacatcacc tggtcccgag cgcccgaagg cgggctcacc ggagtgatcg
     1261 cgttccagcc gggcgagacc tataacgtca aggtcgtctc caccgacgac agcaccatcg
     1321 tgtacgagtc cgagccgcac cggagcccga ccctcaaggg acaggtagtc acccgcacca
     1381 ccgcgaagat ggtcggcgat tcactcaccg gtacctatga ggcccgtgcg accgcgggcg
     1441 gcaaggttct gcgggggcgc ttcaccgcca cgcggggttc ggcaccttcg cagtaacgct
     1501 ccggctcaga aggtcgagcc gatcgagaag tggaggtgta atcgccgccg gggctcggtc
     1561 gggaccgagc tgagcggccg gccttcctcc agggcgtcga gcacgccttg gggcgagcgg
     1621 aggtccaatg ccgacgggtt cagcttgtac cccaccgcga actggatcgc gccgaccacc
     1681 gtctcgtagc cgatgcccgc gcccaccgag gcgaagtagt cgtcttggtc gagctcgccc
     1741 gcgttcagcg cgaaccggct gtcgggggtc cagacccggc cgctgtcgaa gaagagaaag
     1801 gtctgccacg cgtcgctgaa acccggcagc ggaagctgga cttcggcgct tcccaagagc
     1861 cgggccagtc cgcccaccgg ggcgtaacgc tcggcgacgg tgcgcgtctg gccgtcctgc
     1921 gactccaagc ggacctccgg caacttgggc ccaacgagct gactccccca accccgcacg
     1981 tctcgcgttc ctccggcggt gaaggtgacg tcgcccagcc ggaggagtga gacgaaaggc
     2041 gactcctctg tgatctgccg cacgctgcgc ccgaagggat agatgcgtcc tgcgcccacc
     2101 cgcagcgtga aaccgacgcg ggaggtgagc ggcagaaacg cggtggcacc gaggtcgatc
     2161 agcagatact cgctggtgtt gaacccaccg ggggtcgtga tctcgatccg cgggcgcagg
     2221 acgtagcctc gtcggggatt ggcgaactga tccagccggc cgtaactccc ctgcagggtg
     2281 atcgcgcttc gatttcggtc tttccccagc ctgccagcag cggccgagtc ggcgaggcca
     2341 agcagcggga ggtactcgat gggatcgaga ttctccccga agccgtaatc caggatccgg
     2401 cgatgggaga gggagtagcc gagcgagatt gatcggagcg gtcccgcggc gtaggccagc
     2461 gagctctcga atcccacggc acgggaacgg tcccgcaggt cattgcggta ctcgacgaac
     2521 ggtccgaccg cggcggagag acggcggtca ccgacatatg gctgaaacac cgtcaaggcg
     2581 agccgataga gttgctgggc cggggtctcg aacgacaggg caccggtctg ggcggacgcg
     2641 gccgcggaaa aggtacgcag gccacccaga aagctccggt gagtccattc gacctcgccg
     2701 gagagcccgc cgccagaggc gagccccgcc tctccccgta ccagtcgcgg tggattctcg
     2761 gtcacgtcca ggcgcaccac cacgctggag tcatctgcac tttcgcgcgg cacgtcgagc
     2821 agcgccagcc gcaccaggtc gagctgcacc agctgctggc gtcccttttc cagctcgccg
     2881 gcgtcgtacc agtcacccgg cctcactggg agctgccggg taacgtgccg cgcgggaatc
     2941 ccgtggttcc cgctgaccgc aatctccctg atccgcgcgc gaagtccggg acggaccagc
     3001 acggtgacat cggcccggtc tgccgccgtg tccactgcag cacggggatc agccgccgcg
     3061 aacggatagc cccgatcgcg cagccatcgc gtggtgctgt ccgcgagctc ccgctcctca
     3121 tccctgccga agcgatcagc cttccgctgc tgctgccgca cgaagctggt ccagtcccgg
     3181 gccagcttcg gtggaagact gagcccgccg ttgtctccca cgaaacgcag cgagcgcacc
     3241 agcagtggtg gtccctcgtc gatcacgtac gccaccttca ccagatcgga ttttgcatcg
     3301 tactgcacat cgtccttcac gtcggccttg agaaaccccg atcgctgata gtggttccgc
     3361 aggcgcacca cgtctcgctg gagctccagt ggatcgaacg ggtggacgcc gatcggtgac
     3421 acgaatggta ggaagccgaa gaagcggcgg atgcctacca tgccaccccg cgccgtgagc
     3481 gcgatgattc ggcgcagttc tttctcgggc acggtccgct tgccttcgaa gcggaactca
     3541 atggccttca cctcggtgcg cgggccaacg aggctgagcg cgtcctgggc gggaagcggg
     3601 gcccccactg ccgccaggag ggcgagcgct gtgagcgaca cgtcaatacg cgtagcggct
     3661 ccgcagggtg aacctgggtg gaacgttgcc gccacggaca ttggcccgga gccatcgctg
     3721 cgcctcgtat tcaagctcga aggtcggtcc cagattcgca ccgggcatct gctgcacgtc
     3781 accgccaagc tcgatcggca agtggagact gaggaagact cgtgacccta catagcggcc
     3841 cgcggtcaga gtgagcccgt ggagtccttc ctgatggatc tgaaagacgt cgagtcccaa
     3901 ccccttttcc gccgcggtcg acaggctctg tgacaccccg ctgagcgcga gcttcgcgcc
     3961 catctcgccc gcgccctccc caccctccgc acgttgggcc agcggattat ccgacgcggg
     4021 cttaccagtg aggatgtagg agagcatatc atcctggctc atctccgggt cgccggtgaa
     4081 ctcgagcgtc agggtatcgg gacggccctt cgcggcgacc tcgatgagaa ccccctcgtc
     4141 ctcaggccca ccttgggtag gaacccgata ctcagcaatc acgtccagct tggtcgaatc
     4201 ggtggggccg gcaatggtta tctcaccgcc agtgagccgg aactcgcgcc catagacatc
     4261 gaggttgccg cggccgggga ccggctcgac ccggccaaag aactgcatcg gctggcccgg
     4321 ctcctggcgg agccggatcc ggccactgag ctcgatgtcg gccttcgggc ttgtccgccg
     4381 gcgaaaccag acgcgccggg ggagccgcag atccagatcc aggcgaaagc gatccaccag
     4441 cccaggactc ttgtctgccc gcgcaagcac ccctggtccg aactgccgcg caacctggcg
     4501 gaggtcttcc ggcgtgagct cgaccttttc caccgttgcc gccgcctgtc cccctccgac
     4561 gacgatatcg gtccgtccca tcgtgagccg gccggtaagg aaaggcgcct cagcggtgcc
     4621 tccgaggcga agctgacccg aggccaccga ctgcagcgat gacgaattgg aaatgcggaa
     4681 cttggtcagc tcggccgtaa gatcgagcga tgggtcgttg agcggccgga ggcgcacgtt
     4741 gccttgggcg gtgaggattt cctttttgcc ggtacggagc cgaagccgat cgatccggag
     4801 ctcatcgccc gccagcctcc caatgagctc gcctccgcgg tagcgcaggc ccatcgtcgg
     4861 taatgtcagc gctaccccgg tgacctgaat agtgccgttc gcccgcggcg cgtcgggcgt
     4921 tccgctcact cgcgtgtcgg ccaccagcct gccgcggagc tcccgcgctg tctccggcgg
     4981 gagcagcggc tcgaacagtc ccaggtcgaa gctgtcggcc cggaccgcga gcgcgagtgt
     5041 gtcggccgat gcgcgcaccg tcccgatccc cgtagtggta tcggccggag ccagggtgag
     5101 ccgccaaggt agcgtgccat tcactgtgag acgtccgccc ttctgtggcg cggctgtggc
     5161 gtcaacccgc agtcccgcac ggctccaccc caggtcggtg cggatgcgac cgatctcact
     5221 cccttttcgg cggcgaatgg taagtcccaa gcttccttcg agggtcggcc cagccgctgg
     5281 tccagcaaaa cggagccaac catcgagccg gcctccgatc ggtgtcagct tgacctcgcg
     5341 gagcacatcg aggtccacgt cggtaagcct gatcgcgata tcgctggagt gacgtggatc
     5401 gaaagtgcca tctacgatga tgcggcgcgg cccggcgtga agcgccagcc cgtccaccag
     5461 caaattggga cgcagcatca attcggccgg ttgctcgagc gaccaggccc gtccaccctc
     5521 gctgaggtcg agtcgatgca gcacggctcg cacggtgtcg ggtccgacca cgccgcgcaa
     5581 gccagccacg aggcgcatgc tgtcgcccac ggtgacgttt gcctcgaccg tgatgaggga
     5641 gtcatagcgc ccagccagcc gggcgtcggg aattctcacc ttgccatacg ccgcgtcctc
     5701 gacgcggacc tcgcccaccg ccgccgagac gccggtgctg tcgaccgcgg cgctggcttg
     5761 taccgtcatc agctcggcaa ggttgccgac cgagagtatt cgatggacct cggccttgcc
     5821 atcgatgcgc cagtgctgcg ccggcccgct gaccgtgagc gccacccgcc ccgagtcgag
     5881 tgtgaccgag tccgcggcgc cgaccagtgc cgcgagcgga gccaagtcgg cggcggtggc
     5941 agtgacccgg agagtgtcca cccccgcact ctcacgcagc gctacccgcc caccaccgtc
     6001 gagggctgcg acgttggacc ggacgaaaac cgtgtccacc tggatggcgc cgaagtcggg
     6061 ccgaagcgac aggtgcagtg tatgaagacg catccggcca acgccaccaa tcgcgtcgat
     6121 ggtgccgcca agagaaataa gcccggtgct gtcgccggac gcctccagga tgaagcgcgc
     6181 ctcgagccgc ccgtcggcat cagggcggcc ggtccatcgg gcgaggcgct cgaggcgaag
     6241 cgtcccgtcg gtatggacct gtttgatgtc gcccaggcga ccgctcagct tggcaccgag
     6301 ctcgccgtcc ggacccgcca ggcgcaggtc accacgcacc actccgcgct ccagctccag
     6361 cccgacctgt ccgccggtga gctgcgcctg attgaagtga gacgggagca ggtcgactgc
     6421 gagccggccc tgcgtgctgt cggccgagcc ttgggtcatg gtgccggtga atcgcgcatt
     6481 gacgccggtc cgcaggtcgg gccgcccgag cagtgtgccg aggtcgagcg agtcggcgcg
     6541 gccgcggcga atcgcgagcc agggaagttc cgccagcggg cgtccctcgc ccgcgagcgc
     6601 gagagcgccg gcgttggtcc ggagcgaacc atcgtaggtg agccggtctc ccctcagcct
     6661 cgcaatgaac gatccggcag tgacctcgat tcgtcccagt cgcgacagat caacggtcac
     6721 ccgtccatcg agcgagcgag ccccaccgcg ccatcgtccg gtcccgctgg cgcgcaagct
     6781 gaccggcccg gccagatccg gccggcccag gaaggtgccg agatccaccc gctcgatcga
     6841 cgcgctgcgg agatggaagg ccgccgtgga atcgaacggc cgcgcatcgg cgtcgatggc
     6901 gagtcgtccg ccctgaaggg ttccccgaac gtcgatgcgg gcgcgtcccc tgtcgagtcg
     6961 cgcgagaccg ttcacctgct ccacatgccg cgcgccgtat cgcagctcgt cgagctcgat
     7021 ccggagggac gcgaccgcgg catcgggtgc tacgccccga ccagccagcg cgaaccgccc
     7081 cgacagcgga gccacggcgg tgtccccgag cagccggccg aggttcaccc ggtcgatcct
     7141 tccccgcctc acctcatagg tcaccgtgtc gccgaggtgc gcgatggcgt cagcggaaac
     7201 ccgtcctcca gctaccagaa gctccgggcg agcctcgagc cggccgcggg cgagagtcag
     7261 cgtgctgtgg ccgagcggca cactgtcacc gtcgcggcgc agagcagtga gatccaggcg
     7321 accggtgagt cggcctgtta tcggcgacca tccggcacct gcaagctgga agcgaagatc
     7381 gagccgcggc tcgcctgact cgccggccag ggcgcgagcg atggcatcgg agccggggag
     7441 tccgctcgcc gcgccggcca accgatactc gggcacggaa tcgaagggtc gcacccggcc
     7501 ggtgacagtg agtgttccac cctcggctac accgcgaagc cttagcgccg cgcttcctcc
     7561 gcgcaggtcg gcatgaaggt cgacccgctc cagcgccatt ccggcgaggc gcgacgcggc
     7621 aagccggagg tccacacttc cgtcagcccg ggcgagggtc gatcccagga ggtcggcttc
     7681 caccttaccg ttgagactgc ccgagggagc cgcccgatac aaccgggagg gatcgagccg
     7741 gcggatggca ccgttcagcc ggtagtcagc ggcgcctttg gcgagcgggg cggcaccgct
     7801 cagcgtcagg gtggcctcat ccagccgcgc acccagtcgc gcggtgacga gtccgtccac
     7861 attaccctgc gcgcgcgcct ccacgcgtag atcaccctca ggggtcacgc cgggcgcgac
     7921 tgcagcgaga tcggccagcg ccagcggcat cgccttgatc ccgaggtcga gccggtccac
     7981 caggcgggga tcgtcgaggc tgcgcggcag cacgacccac ccggcgacgt cagtctgttc
     8041 ggtctggatt cgcaccggat tgaaccggaa ctcgtccccc gtcaccgcac cgcgggtggc
     8101 gaccgcaaac cagcgcccgc tgccgggcgg tgccaccgct gcattgagct gatccactcg
     8161 gacgagtacc tgcgtgccga tcaccagatc gcgcgcatgg aggttgagcc cacgcacccg
     8221 gagcgcagag tccggggcga gctcggccac gagctccacg tcccgaagat ccagctgttc
     8281 cagtgtgaac tcgccgccgc tcctcgtcgt gtcagccgag cgtcgcagcg catccgccag
     8341 gtcccagctg tcgccctccc gccgcgctac cccccgtgct ccctccactg tcagctcgcg
     8401 tagccggcgc ttggcccctc tcagatgccg caggtcgtac tccaccttga gtcggtccac
     8461 ccgggccaac tcccggttgt ttcggaccag ccgcacctcg tccagcgcca gacggtgcag
     8521 ccagtctccg ctcacccggc cgacctttag gcggtagccg ggattgaggg gaatgaccgt
     8581 gacgagacgg cgcaccatcc aggtggcgac ggggggaagc tgcagcaggg cgagaacgcc
     8641 gaccagcagg gtcagcagaa tgatgccggt ggcggcaagg cgacgggtcc agcggcgctc
     8701 ggcacgtgac gacattggac tccggttctc ggagtggcgc gaatcacccg gggacatcga
     8761 cctggtcata tgtagtgtgc tgccacggct tatgcgacca ccatgacggg cgtcacgctc
     8821 ctggaccatc cagccaagag agaccctagg gcctggcact gctcagcgcg tgtttgtgtt
     8881 ccaagcatac tcttcttagt ttgttttgac ctgctttgtc taagccgaca cagcgtgaag
     8941 tggccggtag cggccggtga tcttaggccg tgaaccgaag tccgagtgaa gtgatgttcc
     9001 cggtagggac tagaacgccc gcgggtgggc cggaacacgt gcccgtgatt gtatacatcc
     9061 aagtcctcac cacgtttttc ctcgatttcc tccctctaga tccggccggc gctcgagtcg
     9121 acctcgaggc cgggctcggc aatgcctgac ctcaacaccg gtctccaagg tgccctttcc
     9181 gctctgactg cgatcggtat tgccgtcttg gttgccgccc accgtcgggc tcggcttggt
     9241 gacgaggcca aagcactgga ggcccgaggc gaccagctgg cccagcgttg gaatgaggag
     9301 cactacccca cgcccgagga tcaggtggtg aactatgcga ccttcatgct ggacatgctt
     9361 gggcggagct tgagctggaa tgcgggaatc aagcggatgt tgggttacga gaaggcggag
     9421 ttcatcggcc ttcccctggc cgacctctac acgtccaagg accaggcaga tgcggcgccg
     9481 gaacgggacc tcgcggaggc aggggagcgc gggagggtca gcaccgagcg ttggatcgtc
     9541 cggaaggacg gaaccagatt ccccgccttg gtgtcgacgg ccagcgtgct cgaccgggag
     9601 ggacaggtcg tgggcttcgc cgagaggttg cgagacatta ccgaggtacg gcgggtcgag
     9661 gaggagcttg gccggagtaa ggaggcgctt gatctcgcca acgaggctgc cggccttggc
     9721 acctgggacc acaatctcgt caccggcgag ctgcactggg acgcgcgagc caaggcgttg
     9781 tttggcctct cctccgatgc tccggtcact tatcccggat ggaccgaggc aatacacccg
     9841 gaagacctcc tgacggcgga agaagtactc gaacgcgccc ttcgtgaccg gcagcccttc
     9901 tcgacacaat accgggtcat ttggcccgac ggcagcattc attggctcgc cgtgatcggc
     9961 cgggccagct acggtccagg taccggcaga ccgctgcgga tgagaggcat cctgctggac
    10021 atcactgagc ggaagcggac ggaggagcgc ctgcaggagg tcatgaggct ggaagcgatc
    10081 ggacggctgg cgggcggcat cgcccacgat ctcaataaca tgctggtggc gatcctgggc
    10141 ttcagcgacc tgttggcgca aagtatggga ggcaacgatc cgaggctcga agacgtgagg
    10201 cagatcagcg aggcagccgc ccggtcggcc gacctcaccc gccagctcct cgcctttgcg
    10261 cggcgcgagc tgatccagcc tcgcaggctc gacctgaaca gcatcgtccg ctacgcagga
    10321 ggaatgctcc gtcccgtgtt gggggagaac gtcaggttgg tcctgcagct ctcctcgacc
    10381 gtaggtccca tccacgccga tcccggccgg ctcgagcaga tcctgatgaa cctcgttctg
    10441 aattctcgag acgctatgcc gcagggcggt cgagtcaccg tggaaacggc gggtgtaacc
    10501 ctggagtcca acggcgcggc atggcaaccg cagtcggagg ctccgccacc gggccgttat
    10561 gccatgctgg ctgtgaccga caccggccat ggcatggacc cggctacgct gcagcatatc
    10621 tgggagccct tcttcactac aaagccggct ggtaagggta ccgggctcgg gctatcggtc
    10681 gtgtatggat cggtgaagca gagcggtggc ttcgtgtggg tcgactccga ggtgggccgc
    10741 ggcaccgccg tgcgggtgta ttggccggag gttctccagg aggcgggcca gttgggcgag
    10801 ctccccgccc cgagaccggc tgagcgcggc agggagtcag tgctcgtggt ggaggacgag
    10861 cgcgtggtgc gcgcgctcat cgtgcgcagc ttggtccgtc tagggtaccg ctgtgtccag
    10921 gcggctgatg cgggggaagc actccaggtg ctggagcagg aggagggcca cgtcgacctc
    10981 gtcatcaccg acgtggtaat gcccggcatc agcggaggcg atctgggatt acgtttggcc
    11041 gagcgctacc ccgctctgcc cgtgctctac acctcgggtt tcgccgacga cgatgtgatt
    11101 cgccgaggct tgctcgatgc cactcggccc ttcctgcaga agccgttcaa tccggccgag
    11161 ctgggacgaa aggtgcggga ggtactcgac tcaccagccg tgcgggagca cccggtccag
    11221 aacgcataag gtcgagcact cccgcacggt tgtcatccct ccgccaactc tcgcggcgtc
    11281 aaactatcac gccacctacg ccctggacat ctagggctct cggcaccact cgggtcgcgg
    11341 agtctacctg aacccggagt gagccgttgg agtggaccag cgcgttaagg atgtcgtagg
    11401 tgcccggtcc cggcacggcc agaccgtcca gaatcacttc gctgggcagg ggatcgccat
    11461 ctccctggtt cagcacttcg tgaatgcgaa ttcgccccat ggtgcagaag aaaatcgtac
    11521 cgatgttcga atccggggcg gtgcgccacc cgtccagtgc agccgttacc cgaatgcccg
    11581 gcagatctgc cctgacctct tgtccgtgac ggatgttggc gtcgctcatt ctctcccgga
    11641 ggcgataggt ctgagaatgg gcaaagacac gtggttccat acgatctcct cgcgtggccc
    11701 ggctctaccg ggcgtacggt tccagacagc gcttccatct tgggagatcg actctctgtt
    11761 gtcggtgggg agcgtgcgtg gccccaggtg gtccggatca cgcggcaccg atggactgca
    11821 gaaacctgcg cgacgcgaac gctagctcag atgcgacccg tcagaagcaa gagcagcagg
    11881 atcaatagaa ccagccccaa cccgccactc gggaagtaac cccagctccg gctgtgcggc
    11941 cacgtcggca gcgcgccgat cagtagcaag agcagaatga cgatcaggat cgtggacatc
    12001 gttcctgctc actttccgtg gtggtcgccc tgccgcagac cggattcctg actagggtcc
    12061 atcttaggct ccaaaggaca tctcggtcaa tagtcggcgg acgtgaccgg cgcagctgtg
    12121 agcggggcca ctgagcagct tcctctaact ccctagcctt aaaccgtttg ctgaaccgaa
    12181 cgggggtgta gcgccccttc ctttatagcg gggagccatg actcgagccc tcctgctcgc
    12241 ctctgcctgt gtcgtcgtgc tcctcggcgc gggcgggtgt cgccacgatg accccatagc
    12301 caaggccatt cggacgacag cgtccaacgc tgtcgcgcct cgatcgatcc agggcgggcg
    12361 ctggaagctg ctgcagctgg tctaccgaga tcgtgactac cggcctctct ggatggatgg
    12421 ccggaaggtg agaggacaag ctcgcgacct gatcgagacg ctgtgccacg cggaacgaga
    12481 aggattgcgc gcggccgatt acgatctcgc cgggctccgg accgacctgg cgcgactccg
    12541 agacgagaag gatcccgccc ctcgcgccgt cgcggcactc gatctccggc tgacccggag
    12601 cttcctcgac tatggagccg acctgcttgc cggccgtctc gacccccagg cggtcgacaa
    12661 cgggtggtac atcagagcgc gacgcgcagc catcgacagc atgcttcagg agtcgctccg
    12721 gtccaggaat ttcgacgaca tgatcgcgcc gctccggccc cgccagcgcg agtacaagaa
    12781 gctggtcgac gcgttggaga agtatcgtga gctggaggga aagggtggct ggtcgctggt
    12841 gccggctgac aaaaggctcg tccggggaga cgagggggcc tcggttggtg cgctccgtca
    12901 ccggctccac gccaccggcg agttgcgcca tgccgggggc gagccggtgt atgacgacga
    12961 cgttgcggct gcggtcgcgc gatttcagga gcgtcacggc cttccggtgg acagctcggc
    13021 cggcgccgcg actctggcgg cgctcaacgt gccggtcgag agtcggatcc gccagatcga
    13081 gctcaacctc gagcgctacc gctggctgcc gagcgacttc gggaagcggt acatcctggt
    13141 caatatccct gactaccagc tctacgccta tgacaagggg aaggaagctc tcacgatgcg
    13201 ggtgatcgtg ggcgacgaat acggc
//
LOCUS       DASYRV010000378        14369 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_4091504, whole genome shotgun sequence.
ACCESSION   DASYRV010000378 DASYRV010000000
VERSION     DASYRV010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 14369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14369
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4091504"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            166..4932
                     /gene="gltB"
                     /locus_tag="VGQ24_09965"
     CDS             166..4932
                     /gene="gltB"
                     /locus_tag="VGQ24_09965"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: protein motif:HMM:NF008730.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HEV8455207.1"
                     /translation="MERAFFLPELGLSGRMGHDNSGGTMAANGQRIHPAGSRQHDPRH
                     AASCSGTALDPTREHDACGVGFVADAAGTRTHEVVAMALEAVARVAHRGAASTDNSGD
                     GAGLLTQIPHRLFYRDSYRLGLHLQPGLAFGVGAFFLPRGAEPLGASVAMIEQVLASD
                     GIPFLGWRDVPTNPAALGPTALASCPVIRQVLVGRPALAVDEDAWERALYLARREMER
                     RAREAGFSGFYACSLSCRTVVYKALLTGTQLPAFFTDFRYPEYESAIAVFHQRYSTNT
                     LPSWPLAQPFRLLAHNGEINTLWGNRNSMAMRQPMLASPVWGEKIERLRDVIWAEGSD
                     SASLDNTMELLVRSGRDPVHTAMMTVPQAWEKYADLDPAVKAFYEYHQCVLEPWDGPA
                     ALAFTDGVLAGAAVDRNGLRPCRYKVRRDGLVVAGSEVGLVDLDPREVVACGKVGPGE
                     VLVVDTQRSEVIRNQDAKRRVAGRKPYARWVARYMATLVPDPARVPPIHSGDSLIRLQ
                     RTFGYGAEDLRIVLEPMGSTGGDPVWSMGDDTPIPPLSAVAPSLYAYFRQRFAQVTNP
                     PIDSLRESMVMSLRMHLGRRGSPLLERPSYARMLRLEHPLLLAEEMTALRNVAGFSTV
                     TLDAVWDPRKGVAGLKPGLTALRRAAERAARRGAHIIIISDRAAGERLTPIPMLLAIG
                     AVRQHLVHAGLRARVGLVAEAGDAFDIHHFAGLIGYGAEAVHPWLALETVDGIFSGEA
                     PKRGSGAGGQRGGEEERATPAVARKQYRDAAEKGLLKILSKMGISTLSSYCGAQTFDA
                     LGLGHEVISACFAGTSSPIGGIGFEEIAEDVLGRHEGAYRTGESSSLTDHGRVRFRKE
                     GEDHGWAPPIVVALQKAVGGRTERTERTEKLAPSEREGTEGEEKFRNTYEEFVAKNTQ
                     RRPAGPRDLLAPKKGRPVPLHEVEPAEEIRRRFVSSAMSLGALSPEAHTTLSIAMNRI
                     GARSNSGEGGEDPENYRPLDNGDRADNRVKQVASARFGVTTEYLIRAEELEIKIVQGA
                     KPGEGGQLPAHKVTDLIARLRHAVTGIQLISPPPHHDIYSIEDLAQLIQDLKTVNPRA
                     RVGVKLVSESGVGTVAAGVAKAYADYVLIAGHNGGTGASPLSSIKHAGSPWELGVAEA
                     QTTLVRNGLRHRIEMRTDGGLKTGRDVIIAALLGAESYGFGTAPLVAMGCAMARQCHI
                     NTCPTGIATQREDLRAKFKGTSEQVITYFTLLAEEVRRLLAGMGVRSIDEIIGRHDLL
                     ERMERPDVPRAQMLDLSMLLAGQRGSGAETRRRTVERNDRPGLISLDREILSDLEPYL
                     DCGLPFSGNYQILNHHLAVGARVAGAIAERHGDAGLPAGSVRLRFTGTAGQSFGAFLC
                     RGVHLELEGEANDYVGKGLSGGEITIRPFRRAAYAHTSHQHLIMGNTILYGATSGKLF
                     AAGQAGDRFAVRNSGAVAVIEGAGNHCCEYMTGGIVVVLGRAGRNFGAGMSNGVAYVI
                     DEAGTFSSRVNLDMVKLSALDAIDVELLGKLIHEHEEKTASARARTILVQWDHYLPLF
                     RKVVPTGAELLVAATRDAYLQTAQPETELLLARRSA"
     gene            5093..5764
                     /locus_tag="VGQ24_09970"
     CDS             5093..5764
                     /locus_tag="VGQ24_09970"
                     /inference="COORDINATES: protein motif:HMM:NF037007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEV8455208.1"
                     /translation="MANTPERVRDPDRSRTSILDAAEQLFADQGYDATSLNQVGAAAG
                     VSRGTPGYFFGSKAELYQAVLDRSFAEVRDAVRAGRARALASNESSETILAGAVSDYF
                     DFLAARPNFVRLIEREALSGSRLPHGASHLSAGQEALAAISAELGLDDSASGEAAQLL
                     LSIISLCWFHLIHGRTVAPAVGVRLEDADDLERRKRHVISLVLHGIRGRSAFTTTSTE
                     HSSHD"
     gene            5757..7622
                     /locus_tag="VGQ24_09975"
     CDS             5757..7622
                     /locus_tag="VGQ24_09975"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEV8455209.1"
                     /translation="MTDVLASPDRLTPTPLATEQEARDVAEAAREKEWQAPSFVRELF
                     EGSLRLDLVHPFPEPDPADLARAKPFMEKLERFMQERVDSDKIDREGKIPSEIVRGLG
                     EIGAFGIKIPIEYGGLGLSQYSYTHAIGLVTSQDGNLTALLSAAQSIGVPTPLKLFGT
                     PSQKKKYLPRLAKGAVSAFALTENQVGSDPAALSTTATLSADGKSYILNGEKLWCTNG
                     TIAELMVVMARTSPKKITAFIVETNWPGVEVVQRLHFMGLKALENGIIRFTDVKVPVE
                     NVLWGEGKGLKLALITLNTGRLTLPASAVAGAKRCLEIVRRWGAERVQWGQPIGKHDA
                     IAQKIGRMAAEIFAMEAVSDLASLMADRGDADIRLEAAMAKMWNTETGWRIVDDTLQI
                     KGGRGYETADSLRSRGERPDPIERMMRDFRINLIFEGSSEIMRLFIAREAVDTHLKLA
                     GDLIDPKAPMAKKIQALLRSGAYYAYWYPKLWLGWGRMPQYGEFGPLATHVRFVSRSC
                     RRLGRTLFHCMVRFGPKLEKRQAVLGRLVEIGAELLAITAACSKAYSMYKKDPNNRGP
                     VELAGLFAWQARRRVEERFEAVFDNEDVRTYAVAQQVLRGEHSWLETGMVREGGR"
     gene            7754..8143
                     /gene="queF"
                     /locus_tag="VGQ24_09980"
     CDS             7754..8143
                     /gene="queF"
                     /locus_tag="VGQ24_09980"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR03139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HEV8455210.1"
                     /translation="MAIAEGRTIPFVGPEAIDAAVLETFEYSGPEQEIVTETREFTAV
                     CPYSGLPDFATLTIKYTPSDRCVELKSLKYYVTSYRNVGIFQEHATGRIAEDLFKLLE
                     PQMLEVTTLYNVRGGFETRCTVRLPKV"
     gene            complement(8382..9959)
                     /locus_tag="VGQ24_09985"
     CDS             complement(8382..9959)
                     /locus_tag="VGQ24_09985"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEV8455211.1"
                     /translation="MHEHVTLMHPDERGPTARGISSGFPADLLSQSAARLRILALLYA
                     FVFFMAGIFPALLFPGDRARFLGSFVQWGPSVIGIVVASLVAAVIRSARLPLPAAMSL
                     GLFFEIASSYAIAAAEFGDPQGLEMHRGFLGLSWVAVWVVLFTVVVPTAPRRAVLAAL
                     ASVSSVPVIIGLMIASGTTSLRIDPAQFFIGLVFPYLLVVGMAYVGARVVYHLGTEVR
                     RARELGSYLLEEKLGEGGMGEVWRARHRMLARPAAIKLIRPSVAGNAPAGVSEEAIRR
                     FEREAQVIARLRSPHTVELFDFGRAADGAFYYVMELLDGLDADSLLRRFGPTPAERAI
                     YLLRQVCHSLSEAQSCGLVHRDIKPANIFLCRYGEEYDFVKVLDFGIVGAVRDAADTS
                     LVHTRENAVRGTPAFIAPEQAMGKVVDGRADIYATGCVAYWLLTGQFVFTAETPMGLL
                     LQHAQTPPTPPSARTELPIPPALDDLVLSCLAKDPANRPQSARELSLRLAEVEGASAW
                     TQDRAREWWATHHLALP"
     gene            complement(9998..10528)
                     /locus_tag="VGQ24_09990"
     CDS             complement(9998..10528)
                     /locus_tag="VGQ24_09990"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEV8455212.1"
                     /translation="MIPDLRDTIFNTWRTNNRLTVFLVEHLSPGLWVAAVPGAPRRTI
                     RMIAGHMHNARCMWIKTLGQELGVPVPRSVDRRRVGRPELVQALHRSSRGILRLLALG
                     CEQGGTIPTASTYIWRNLPLDVGHVLGYFVAHEAHHRGQIVLVARALGDRLPAAVTEG
                     LWQWTKRAAEAKAEKR"
     gene            complement(10610..11068)
                     /locus_tag="VGQ24_09995"
     CDS             complement(10610..11068)
                     /locus_tag="VGQ24_09995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455213.1"
                     /translation="MVHPPSTLIIGIVVFLFFAGIAIISNVFPNKTVTWWTTTIFVGF
                     ALLSLPIVADYVLARHDVSEEGLSYGRLTGHRGYLKWSDLHRVKYAPVMKWFRLETQS
                     GDVARISAMLRGLPEFARLLLARTPPHAIDAETLSILQATADGNPPPVWN"
     gene            11626..12198
                     /locus_tag="VGQ24_10000"
     CDS             11626..12198
                     /locus_tag="VGQ24_10000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455214.1"
                     /translation="MQESLRAARPVAHRALWRAQWAAKEAVRRAQRHGEDLWRRGKRN
                     PRTVGVIGGAVALTLIGAFALSASGAGRSLCPRASDRKTPQFLVLMDRVSQVTAGSEV
                     EIHYDVCGLASGTPYRGRVRLAQVKKGSAKPKPLVVSFKDQVDGVATRRQQELDLAST
                     RPGAYTLELSVTDNQGRERKRVQKVLVKAR"
     gene            complement(12475..13992)
                     /locus_tag="VGQ24_10005"
     CDS             complement(12475..13992)
                     /locus_tag="VGQ24_10005"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEV8455215.1"
                     /translation="MLKRHFVGLLVLITANPVAAQSRVDTAGAGALIEQAMNRSQVMQ
                     NLQHLGDVIGPRLSGSPAMRRANDWTAERFRAYGLTATLEPYSFGVTWERGPAALRLE
                     APFSREITAHSWAWTEGTGGKTVSGPVVLTDLSTPESLAVYRNKVKGAWVLPRAPFPT
                     WNPDGPPMTAADSAELQAQIKFRASPFADTSAAAVAARRQFQIDLPYILKAAGALGTL
                     IDGAKDHGLMTMSGSPTRVSPLPSLVISREDYALLARLIGAGVTPRVGGRIENRIGKT
                     PVQQWNTVAEIRGKERPGQVVILGAHLDSWDLGTGVTDNGTGSMVVLEAARALAQSGL
                     KPKRSIRFILFSGEEQGLLGSRAYAEAHAAQADSIQAVLVLDNGTGAITGQALQGRKD
                     LEGLWKELLAPVASLDADSVRDAIKSGTDHLSFLPYGIPGFNFDQISRGYNHTHHSQS
                     DTYDKAVAGDLKQAAAVMAVTAYEFANLPELLPRGPKSPVVPVPTRPSPGLTAAR"
     gene            14187..>14369
                     /locus_tag="VGQ24_10010"
     CDS             14187..>14369
                     /locus_tag="VGQ24_10010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HEV8455216.1"
                     /translation="MPKDSVTLTDNRTGKTYELPIVDGTIRATDLRQIKVSEDDFGMM
                     TYDPAFMNTAACRSRIT"
BASE COUNT         2601 a         4606 c         4793 g         2369 t
ORIGIN      
        1 gtccgcccgt ccgcctgtcc gtgagccttg acgaattcat cgcaatgtat aataatgcgg
       61 catgaacgcg tcgcctgtca tcgccaccaa tcttaatctc gtccgctcca ggggagcgcc
      121 cgggtgactt agcgcgtaca cgcgaccccc aggcctgctc ccgacatgga gcgggccttt
      181 tttctgcccg agctcggcct ctccggccga atggggcacg acaactcagg aggcaccatg
      241 gccgccaatg ggcagcggat ccacccggcc ggttcccgtc agcacgatcc ccgacacgcc
      301 gcttcatgca gcgggaccgc cctcgacccc acgcgcgagc acgatgcctg cggtgtcggc
      361 tttgtggccg acgccgcggg cacacgcacc cacgaagtcg tggctatggc gctcgaggcc
      421 gtggctcgag tggcgcatcg gggagcagcc tcgactgaca attccggcga tggtgccggc
      481 ctcctgaccc agatccccca tcgtctcttt taccgggatt cgtatcgcct ggggctgcat
      541 ctccagcccg ggttggcttt cggagtcggc gcattcttcc tgcccagagg agccgagcct
      601 ctgggggcgt cagtagccat gatcgagcag gtgctcgcgt cggacgggat tcccttcctc
      661 ggctggcggg acgtccccac caacccggca gcgctcggcc ccaccgcact ggcctcatgt
      721 ccggttatcc gccaggtcct ggtgggccgg cccgcgctgg ccgttgatga ggatgcgtgg
      781 gaacgggcgc tctatctggc ccggcgcgaa atggagcgac gggcgaggga agccggtttc
      841 tcgggcttct acgcctgctc gctctcctgt cgcaccgtgg tgtacaaggc gctgctcact
      901 gggactcagc tcccggcgtt cttcaccgac ttccgctacc cggaatacga gagcgccatc
      961 gcggtcttcc accagcgcta ctcgaccaac acgctgccga gctggccact ggcgcagccc
     1021 ttccggctgc tagcccacaa cggcgagatc aacacgctct ggggcaatcg gaattcgatg
     1081 gcgatgcggc aaccgatgct ggcctcgccg gtgtggggcg agaagatcga gcgcttgcgc
     1141 gacgtgatct gggccgaggg cagcgactcc gccagcctgg acaacaccat ggaactgctc
     1201 gtgcgctcgg gccgggatcc ggtgcacaca gcgatgatga cggttcccca ggcctgggag
     1261 aagtacgccg acctcgatcc ggcagtgaag gccttctatg agtatcacca gtgcgtcctg
     1321 gagccgtggg acggacccgc cgcgcttgcg ttcaccgacg gcgttctcgc gggcgccgcg
     1381 gtcgatcgca acgggctgcg gccctgccgc tacaaggtcc gccgcgacgg cctggtcgtc
     1441 gccggctcgg aggtagggct ggtggatctc gatccgcgcg aggtcgtcgc gtgcggaaag
     1501 gtgggaccag gcgaagtgct cgtagtggat acccagcgca gcgaagtcat ccgcaatcag
     1561 gacgcgaagc gcagggttgc cgggcgtaag ccctatgccc gttgggtcgc tcgctacatg
     1621 gcaaccctgg tacccgaccc tgcgcgggtg ccgccgattc acagcggtga ctctctaatc
     1681 cggctgcagc gcacgttcgg ctacggagcg gaggatctgc gcattgttct cgagccgatg
     1741 ggcagcaccg ggggggatcc agtctggagc atgggtgacg acacacccat cccaccgctc
     1801 tcggcggtgg caccgagcct gtacgcctat tttcgccagc ggttcgccca ggtcaccaat
     1861 cctccgatcg actcgctccg cgaatcgatg gtgatgtccc tccggatgca cctgggccgg
     1921 cggggctcgc cattgctcga gcgcccctcg tacgcccgca tgctccggct ggagcatccg
     1981 ctgctcctgg ccgaggagat gaccgcgctg cgcaacgtgg ccggattctc gaccgtgacc
     2041 ctggatgcgg tgtgggaccc caggaagggc gtggccgggc tcaagccggg cctcaccgct
     2101 cttcgccggg cggcagagcg cgcggcgcgc cggggtgccc acatcatcat catcagcgac
     2161 cgggctgccg gtgagcggct gacccctatc cccatgctgc tggcgatcgg cgccgtccgc
     2221 cagcatctgg tgcacgctgg attacgcgca cgggtgggtc tcgttgccga ggctggcgat
     2281 gcgttcgaca tccaccactt cgccggcctg atcggatacg gtgccgaagc ggtgcatccc
     2341 tggctcgccc tcgagacggt ggatgggatt ttcagcgggg aagcgcctaa gcggggcagc
     2401 ggggcgggcg ggcagcgggg cggtgaggag gagcgagcaa caccggcggt ggcgcggaag
     2461 caatatcgcg atgcggccga gaagggcctg ctcaagatcc tgtccaagat ggggatctcg
     2521 acgctgtcgt cctactgcgg ggcccaaacg ttcgatgcgc tggggctcgg tcacgaggtg
     2581 atctccgcct gcttcgcggg gacctcctca cccatcggtg ggattggctt cgaggagatc
     2641 gccgaagatg tgctgggccg gcacgaggga gcatatcgga ctggcgagtc cagctccctg
     2701 accgatcacg gccgggttcg tttccggaag gaaggcgaag atcacggctg ggcgccgccg
     2761 atcgtggtgg cgttgcagaa ggcggtggga ggaaggacgg agaggacgga gaggacggag
     2821 aagcttgccc caagcgaacg cgagggaacg gagggtgagg agaagttccg gaatacctac
     2881 gaagagttcg ttgcgaagaa cactcagcgc cgcccggcag ggccgcgcga tttgttggct
     2941 ccaaagaagg gccggcctgt gcctctccat gaggtggagc cggccgagga gatccgccgc
     3001 cggtttgtgt cctccgccat gtcgctgggc gcgctctcgc cggaggcgca caccaccctg
     3061 tcgatcgcga tgaaccggat cggggcccgc tccaattcgg gagaaggcgg cgaggacccg
     3121 gagaactatc ggccgctcga caacggcgac cgggcggaca atcgggtgaa gcaggtggcc
     3181 tccgcccgat tcggggtgac caccgaatat ctcatccggg cggaggagct tgagatcaag
     3241 atcgtgcagg gggcaaagcc gggcgaaggc ggccagctcc cggcccacaa ggtcaccgac
     3301 ctcatcgccc gattgcggca tgccgtgacg gggattcagc tgatctcgcc gccaccgcat
     3361 catgacatct actcgatcga ggacctggcg cagctcatcc aggatttgaa gacggtgaac
     3421 ccccgcgccc gggtcggcgt caaactggtc tccgagagtg gcgtggggac ggttgcagcc
     3481 ggcgtggcga aggcctacgc cgactacgtg ctcatcgcgg gacacaacgg cgggaccggg
     3541 gcttcgccgc tctcctccat caagcatgcg ggatcgccct gggagctcgg cgtggcagag
     3601 gcgcagacca ccttggtgcg caacggactt cggcaccgaa tagagatgcg aaccgacgga
     3661 ggcctgaaga ccgggcggga cgtgatcatc gcggcgctac tcggcgccga gagctacgga
     3721 ttcggcaccg caccgctcgt ggcgatgggc tgcgccatgg cccggcagtg ccacatcaac
     3781 acctgcccca ccggcatcgc cacgcagcgc gaggacctgc gtgccaagtt caagggcacg
     3841 tcggaacagg tgatcaccta tttcaccttg ctagccgagg aggtgcgtcg gcttctggcg
     3901 ggcatgggcg tccgctcaat cgacgagatc atcgggcggc acgacctgct ggagcggatg
     3961 gagcggccgg acgtgccacg ggcgcagatg ctggatctgt cgatgttgct cgcggggcag
     4021 cgaggcagcg gggcagaaac aaggcggcgg acagtggaac ggaacgatcg tcctggactg
     4081 atctcgctgg accgggagat cctgagcgat ctggagccgt atctggattg cggcttgccg
     4141 ttctccggca attaccagat cctcaaccac catctcgcgg tcggcgcgcg ggtggccggc
     4201 gcgattgcgg agcggcacgg cgatgccggg ctgccggccg ggtcggtgcg gctccggttc
     4261 accgggactg cgggtcagag cttcggcgca ttcctctgtc gcggcgtgca tctcgagctc
     4321 gagggcgagg cgaacgatta cgtgggcaag ggtctgagcg gcggggagat caccatccgg
     4381 ccgttccggc gggcagcata cgcccatacc tcgcaccagc acctcatcat ggggaacacc
     4441 atcctctacg gcgcaacgtc cgggaagctg ttcgcggcgg gccaggcggg agatcgcttc
     4501 gcggttcgga actccggggc ggtcgcggtg attgagggag ccggcaatca ctgctgcgag
     4561 tacatgaccg gcggcatcgt cgtggtgctc ggccgggcag gacggaactt tggggccgga
     4621 atgtcgaacg gggtcgcgta cgtgatcgat gaggcgggca cgttctccag ccgagtcaat
     4681 ctcgatatgg tcaaactatc tgccctggat gcgatagacg tcgagctgct ggggaagctg
     4741 attcacgagc acgaggagaa aacggcgagc gcccgagcgc ggacgattct cgtgcagtgg
     4801 gaccactacc tgccgctgtt ccggaaagtg gtgcccaccg gcgccgagtt gctcgtggcg
     4861 gcgacccgtg acgcatacct ccagacggcg cagccggaga cggagctgct gctggcgcgg
     4921 cgcagcgcat aggcgccaaa acgcccgcct ggcggccggc catgcccgcc ccaggcgggc
     4981 attgacgcga cccggttgcc gagatcggga tggcaggccg cttgacggct tcctgcgcgc
     5041 aaggtaactt gctgatcagc aagcaagctg caaccctttg cacgagcaga cattggcgaa
     5101 caccccagag cgagtgcggg acccggatcg gagccgaacg tcgatcctcg acgccgcgga
     5161 gcagctcttt gccgaccagg gatacgacgc caccagcctg aatcaggttg gcgccgcggc
     5221 cggggtctcc cggggcactc cgggatactt cttcggatcc aaagccgagc tctaccaggc
     5281 ggtgctcgat cggtcgttcg ccgaggtccg ggacgcggtg cgcgcgggcc gcgcccgcgc
     5341 gctcgcgagc aacgagagct ccgagaccat tctagccggc gccgtctccg attacttcga
     5401 cttccttgcg gcccggccca acttcgtccg gttgatcgag cgggaagctc tcagcgggag
     5461 ccggcttccg cacggcgcga gtcacctgtc cgctggacag gaagccctcg ccgccatcag
     5521 cgccgagctg ggtctcgatg actcggcatc cggcgaggcg gcgcaactgc tgctcagcat
     5581 catctcgctc tgctggtttc acctgatcca tggccgaact gtcgcgcccg cggtcggggt
     5641 gagactggaa gacgccgacg atctggagcg gcgcaagcgt cacgtgatct ccctggtgtt
     5701 gcacggtatc cgcgggcgtt ctgccttcac aacaacctca accgagcact cgagccatga
     5761 ctgacgttct cgccagcccc gaccgattga ccccgactcc gctcgccacc gagcaggagg
     5821 cgcgcgatgt ggcagaggcc gcgcgggaga aggaatggca ggcgccgagc ttcgtgcggg
     5881 agctgttcga aggctcgttg cggctcgacc tggtgcaccc gttcccggag ccggaccccg
     5941 cggacctcgc acgcgccaag ccgttcatgg agaagctcga gcgcttcatg caggagcggg
     6001 tggacagcga caagatcgat cgtgagggga agatcccctc ggagatcgtg cgcggattgg
     6061 gtgagatcgg tgcgttcggg atcaagatcc cgattgaata cggcggtctc ggactgagcc
     6121 agtacagcta tacgcacgcc atcgggctgg tgaccagcca ggacggcaac ctcactgccc
     6181 tgctctccgc ggcgcagtcc atcggtgtcc ccacgccgct caagctgttc ggcactcctt
     6241 cccagaagaa gaagtacctg ccccgcctgg caaagggcgc ggtgtcggcc ttcgcgctca
     6301 ccgaaaacca ggtgggctcc gacccggcgg cgctcagcac caccgccacg ctctcggccg
     6361 acggtaagag ctacatcctc aacggcgaga agctctggtg caccaacggc accatcgcgg
     6421 agctgatggt cgtgatggcg cggaccagtc cgaagaagat caccgccttc atcgtcgaga
     6481 cgaactggcc cggcgtcgaa gtagtgcagc ggctccactt catgggattg aaggcgctgg
     6541 agaacgggat catccgcttc accgacgtga aggtgccggt cgagaacgtg ctctggggcg
     6601 aagggaaagg gctcaagctc gcgctgatca ccctcaacac cggccggctc accctgcccg
     6661 cctcggccgt cgccggcgcc aagcggtgcc tggagatcgt gcgccgctgg ggtgcagagc
     6721 gggtgcagtg gggccaaccg atcgggaagc acgatgccat cgcccagaag attggccgga
     6781 tggcggcaga gatcttcgcc atggaggccg tgtcggacct cgcctccctc atggccgatc
     6841 ggggcgacgc ggacatccgg ctcgaggccg ccatggccaa gatgtggaac accgagaccg
     6901 gatggcggat cgtggacgac acgctccaga tcaagggcgg ccgcggctac gagaccgcgg
     6961 acagcctgag gagccggggc gagcgccccg acccgatcga gcgcatgatg cgggactttc
     7021 gcatcaacct gatcttcgag ggatccagcg agatcatgcg gctgttcatc gcccgcgagg
     7081 cggtggatac ccatctcaag ctcgccggcg acctgatcga tccgaaggcg ccgatggcga
     7141 agaagatcca ggccctgctc cgttcgggcg cctactacgc ctactggtac cccaagctct
     7201 ggctgggctg gggacgcatg cctcagtatg gggaattcgg gccgctggcc acccatgtcc
     7261 gcttcgtctc ccgctcatgc cgccgtctcg gccgcacgct cttccactgc atggtccggt
     7321 tcgggcccaa gctggagaag cgccaggcgg tgctgggccg gctggtcgag atcggcgccg
     7381 agctcctggc catcaccgcg gcgtgctcca aggcgtactc catgtacaag aaggacccca
     7441 acaaccgggg tccggtcgag ctcgcgggcc tcttcgcctg gcaggcgcgc cgtagggtgg
     7501 aggagcgttt cgaggcggtc tttgacaacg aggacgtgcg gacctacgcg gtggctcagc
     7561 aggtgctgcg gggagagcat tcctggttgg agacggggat ggtgcgggaa ggcggtagat
     7621 gaagcggcgg taaggcggta aggcggtaag gcggtaggtt gtcacccctt cacttcgttc
     7681 agggcaggct ctgagcgcag cgagggggcc aagccccggt ttattttagg atggcatctt
     7741 ccagggaaga accatggcca tcgcagaagg caggaccatc cccttcgtag gccccgaggc
     7801 catcgatgcc gcggtgctcg agaccttcga gtactccggg ccggagcagg agatcgtcac
     7861 cgagacccgg gaattcaccg cggtctgtcc ctatagcggc ctgcccgact tcgccacgct
     7921 taccatcaag tacaccccat ccgaccgttg cgtcgagctc aagagtctga agtactatgt
     7981 cacgagctat cgcaatgtcg ggatttttca ggagcatgcg acgggtcgaa tcgcggagga
     8041 cctgttcaag ctgctcgagc cgcagatgct ggaagtcact acgctctaca atgtgcgggg
     8101 tgggttcgag accagatgta ccgtgagatt gcctaaggtg tagtcattgc gaggcgcgtt
     8161 agcgccgaag caatcccgcc gcaattgttt caccacagag ggacacagag ggatcgctgg
     8221 ccagtggtgt tagtcgcatt acagggatat cgaagcctgc tctgaatgaa gcgaagaggc
     8281 ggtaaggcgg gagccggtgc ggatgaaccg aaagcggcgc gggagcggtc gcgagcggca
     8341 gtcggagagc cgcgcggcgg ctccaaggct cacgtgtcga cttacggcag cgccaggtgg
     8401 tgcgtcgccc accactcccg cgcccggtct tgggtccagg cgctcgcgcc ttccacctct
     8461 gccagccgca gcgacagctc tctggcggac tgcggtcgat tggcggggtc ctttgcgaga
     8521 caggacaaca cgaggtcatc gagtgccggg ggaatcggca gctccgtccg ggctgacgga
     8581 ggcgtaggcg gcgtctgggc gtgttggagg agaagcccca tgggggtctc ggcggtgaac
     8641 acgaactggc cggtcaggag ccaataggcc acacagccgg tcgcataaat gtcggcgcgc
     8701 ccgtccacaa cctttcccat cgcctgctcg ggggcaatga acgccggcgt accacggacc
     8761 gcgttctccc gggtgtgcac caggctcgtg tccgcggcat cgcgaactgc ccctacaatc
     8821 ccgaaatcca gcaccttcac gaagtcgtac tcctcgccgt accggcagag gaagatgttc
     8881 gcgggtttga tgtcgcgatg aaccaggccg cacgactggg cctctgacag cgagtgacaa
     8941 acctggcgaa gcaggtagat ggcccgctcg gccggggtgg gcccgaagcg ccggagtagt
     9001 gagtctgcat cgaggccgtc gagcagttcc atgacgtagt agaaggcgcc gtcggcggcc
     9061 ctcccgaaat cgaagagctc caccgtatgg ggtgagcgga ggcgggcgat cacctgggcc
     9121 tcgcgctcga atcggcggat tgcctcttcc gacactccgg caggcgcatt cccggcgacg
     9181 gaaggccgga tgagcttgat ggcggcgggc cttgccagca tgcgatgccg ggctcgccag
     9241 acctcgccca tccccccctc tcccagcttc tcctccagga ggtagctccc cagctcgcgc
     9301 gctcgcctga cctcggtgcc gaggtggtag actacgcggg cacccacata ggccatgccc
     9361 accacgagga gataggggaa caccagcccg atgaagaact gtgccgggtc tatccttaat
     9421 gaggtagtgc cggaggcgat catgagcccg atgatgaccg ggaccgagct gacggatgcc
     9481 agggcggcca acaccgcgcg gcgcggcgcg gttggcacga cgaccgtgaa cagcacgacc
     9541 catacggcaa cccaggagag ccccaggaag ccacggtgca tctcgagtcc ctgcggatcg
     9601 ccgaactcgg cagcggcgat ggcgtagctg ctggcgatct cgaagaacag gccgaggctc
     9661 atcgccgccg gaagcggaag ccgcgcgctc cggatcaccg ccgcgacgag cgacgctacc
     9721 acgatcccga tcacgctggg accccactgc acgaagctcc cgaggaatcg ggctcggtcg
     9781 cccgggaaca gcagcgccgg gaagatcccg gccatgaaga agacgaacgc gtacaggaga
     9841 gcgaggatgc ggaggcgggc ggcagactgg ctgaggagat cggcggggaa tcccgacgag
     9901 atccctcgag cggtcgggcc acgctcgtcc gggtgcataa gagtgacgtg ctcgtgcatg
     9961 ccgagctcca agggcgccct acgaaatgcc tgtccgccta gcgcttctcc gccttcgcct
    10021 ccgccgcgcg ctttgtccac tgccagaggc cctcggtgac cgccgctggg agccgatcgc
    10081 ccagtgcccg ggccacgagc acaatctggc cgcggtggtg cgcctcgtga gccacgaaat
    10141 agcccagaac gtgccctaca tcgagcggaa gattacgcca gatgtacgtc gaagccgtcg
    10201 ggatggtgcc gccctgctca cagccgaggg caagcaggcg gaggattccc cggctactcc
    10261 ggtgtagggc ctgaaccagc tccgggcgcc cgactcgccg tcggtcgacg ctacggggca
    10321 ctggcacccc cagttcctgg cccaaggtct tgatccacat gcaccgggcg ttgtgcatgt
    10381 ggcccgcgat catgcgaatc gtgcgacggg gcgcccccgg gacggcggcg acccacaacc
    10441 caggtgacag gtgctcgact agaaacaccg tcagccgatt gttagtccgc caggtgttga
    10501 agatggtatc ccgaaggtca gggatcacaa cagcctgacc tttcattgaa gggttggctg
    10561 acgcctaacg gaccgcccat cagctgcggc gctaggccta gcgagcactc tagttccaga
    10621 ctgggggagg gttaccatcg gcggtcgctt gaaggatcga cagtgtttct gcgtcgatcg
    10681 catgaggcgg cgtgcgggcg agaagaaggc gagcgaactc cggaagtccc ctaagcatgg
    10741 ctgaaatgcg tgcgacgtcg ccagactggg tctccagtcg aaaccacttc atcaccggcg
    10801 cgtattttac tcgatggaga tctgaccact tgagatatcc acggtgaccg gtcagcctac
    10861 cgtagctcaa cccctcctcc gagacgtcgt gacgcgcaag aacgtagtca gcaacaattg
    10921 gtaaggaaag gagcgcgaat cccacgaata ttgttgtcgt ccaccacgtg acggttttgt
    10981 taggaaacac gttcgagata attgcaatac ccgcgaagaa gagaaatacc acaatgccga
    11041 tgatgagcgt gcttggagga tgaaccaacc gtcgtggatc cgaatgtggc cgagccttga
    11101 cgcgactcct tacgacccag cccataacca gggccatcaa aattccccac actgtccact
    11161 gcacgaccgg tccccaccat ggtcgatgca tcgctcacct tcgtagggcc taactaatta
    11221 gactgccacg gagccgattt cacgtgtgaa gataatcatc agtctgcgac cgcagttagg
    11281 ctgacggcgc cctgcacgcc ccggatcctc ctcgcacatt gcccgactcg gcccggtttg
    11341 ttcccccatc ccgcgagctc gtcgggcaga tgcaatttct gtctcgaggc tccatgtgat
    11401 tggggattaa tggattggtc gtaagacccg cagcggcaat gctgcttggg ctccagtttc
    11461 acgatccttg ctcggtttct tcctcccgcc agccagctga aaccagaatc tttgcgaggt
    11521 ctgaggaata tgagcaatcc attttccggg actccggatc cagggacacc ccctccgatt
    11581 agaaggcgca tccagccggc gccggtgcag gaagcgcttc gggcaatgca ggaatcactt
    11641 cgggctgcgc ggccggtagc acacagagcg ctctggcgag cacagtgggc agcgaaggaa
    11701 gccgttcggc gagcgcagcg gcacggcgag gacctgtggc gccgggggaa gcgcaatcct
    11761 cgcaccgtcg gcgtcatcgg tggagcagtc gctctgacgc tgatcggcgc gttcgccctg
    11821 agcgcctccg gggctggacg atcgctctgc ccccgcgcga gcgaccggaa gacgccgcag
    11881 tttctcgtgc tcatggaccg ggtatcccag gttacagcag gatcggaagt ggagatccac
    11941 tacgatgtgt gtggcttggc ctcggggacg ccctaccgcg gtcgcgttcg actcgcccag
    12001 gtgaagaaag ggtcagccaa gccgaaacca ctggtggtca gcttcaagga tcaggtggat
    12061 ggagtggcga cccgccggca gcaggagctg gatctcgcct cgacgagacc gggcgcatat
    12121 accctcgagc tttcagtcac tgataatcag gggcgggagc gcaagagagt gcagaaggtg
    12181 ctggtcaagg ctcggtgagc gggaaggcgg taaggcggta ggtgaagcgg cggtagatac
    12241 tgcggcggta cggcggtacg gcggtacggc ggtagggcaa ggcagcggaa tcccactgtc
    12301 atcctgagcg aagcgaagag cctgccctga gcccgccgaa gggatcgtcc cgggtgacgt
    12361 ttcagcatcg gagcggaaat ggcacgccgt ccgatttctc gctccgctcg aaatgacagc
    12421 gtgatcgggc ttcctacgcc gtaccactcc ctcgctacgc tcgggatgac ctccctatcg
    12481 agcggccgtt aaccccggcg aaggtctggt cggcaccggt acaacgggac tctttggtcc
    12541 tcggggcaat agctcgggca gattagcgaa ctcgtacgcc gtcaccgcca tgaccgccgc
    12601 cgcctgcttc agatctcccg ccaccgcttt atcgtacgta tcgctctgag agtgatgggt
    12661 gtggttgtac ccgcgggaga tctgatcgaa gttgaatccg ggaatcccgt aaggcaaaaa
    12721 cgagagatgg tcggtgccgc tcttgatggc gtcccgcacg ctgtcggcgt cgagcgatgc
    12781 aaccggcgcc agcagctcct tccacagtcc ctccaaatcc ttccgcccct gtagcgcctg
    12841 gcccgtgatg gccccggtgc cgttgtccag caccagcacg gcctgaatgc tgtcggcctg
    12901 ggccgcatgc gcctcagcgt acgcgcgcga gccgagcaac ccctgctctt ccccactgaa
    12961 cagaatgaag cggatcgagc gcttcggctt gaggccggac tgcgcgaggg cccgggccgc
    13021 ctcgagcacc accatcgacc cggtgccgtt gtcggtgacg ccggtgccga gatcccagct
    13081 gtccaggtgg gccccgagaa tgaccacctg gccgggccgc tcttttcccc tgatctccgc
    13141 caccgtgttc cactgctgga ccggagtctt gccgatccgg ttctctatcc gtcctcccac
    13201 ccgcggcgtt acgcccgccc cgatgagccg ggcgagcagc gcgtagtcct cacgcgagat
    13261 caccagactc ggcaagggcg acacccgggt cggcgagccg ctcatggtca tgaggccatg
    13321 gtccttggcc ccatcgatga gggtaccgag tgcgccggct gccttgagga tatagggcag
    13381 atcgatctgg aactgccgtc gagccgccac cgccgcggca gaggtgtccg cgaacgggct
    13441 cgcccggaac ttgatctggg cctggagctc ggccgaatcg gccgcggtca tcggcggacc
    13501 atcgggattc caggtaggga acggcgcccg cgggagcacc cacgcgcctt tcaccttgtt
    13561 acggtagacc gccagactct ccggagtcga gagatcggtg aggacgacag ggccgctcac
    13621 ggtcttgcct cccgtgccct cggtccaggc ccagctgtgg gcggtgatct cacgggaaaa
    13681 gggagcctcg agccggaggg cagccggtcc acgctcccag gtgacgccga agctgtacgg
    13741 ctcgagcgtg gccgtgaggc cgtacgctct gaaccgctcc gcggtccagt cgttggcgcg
    13801 ccgcatcgcc ggtgagccgg agagcctggg cccgatgaca tcgcccaggt gctggagatt
    13861 ctgcatcacc tgagaccggt tcatcgcctg ctctatcagc gcccccgccc ccgcagtatc
    13921 gactctggac tgggcggcaa cgggattggc tgtaatgagc accagcaggc cgacgaagtg
    13981 tcgcttgagc aagagtacct ctacattgat agttgacttg tcattctgag cgcagcgaag
    14041 aatctctgaa atgacggagg gatccttcgc ttcgctcagg atgacaagct aacacctgtc
    14101 cgccggggtt cctccggtcc cgcaacccct ctatagttgg agtcgcaagc cgaacccgca
    14161 acgtctcacc gctaaggaag ccgctcgtgc ccaaggacag tgtcaccctc accgacaacc
    14221 gcaccggcaa gacgtacgag ctgccgatcg tcgatggcac catccgcgcc accgatctcc
    14281 gccagatcaa ggtgtcggaa gatgacttcg gcatgatgac gtacgacccg gcgttcatga
    14341 acaccgccgc gtgcaggagc aggatcacg
//
LOCUS       DASYRV010000379         2830 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2571335, whole genome shotgun sequence.
ACCESSION   DASYRV010000379 DASYRV010000000
VERSION     DASYRV010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2830
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2571335"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..392
                     /locus_tag="VGQ24_10015"
     CDS             <1..392
                     /locus_tag="VGQ24_10015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455217.1"
                     /translation="AGPNVTAPIGGGLPPLAGVIADNTTPVPGGAACVPNIPVNASEA
                     GGGTTTCGTLFEAMKWEKRIESAYSAFAVWFFDSRRWGDLPLNTPVHWAPPYQDLQVR
                     LRQGLKIYSVGGGTNPTGSAARSGYGW"
     gene            481..879
                     /locus_tag="VGQ24_10020"
     CDS             481..879
                     /locus_tag="VGQ24_10020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455218.1"
                     /translation="MDPKVGSRVAFDVNDAGRAALGGTLGPEIAQVEGQLLEKENGSY
                     LLAVSAVRLLRGTEQVWSGEQVRLNSSYLGPAFERKFSVGRSLGFGLIGVGGITAFFV
                     TRSLLASGNDDNRPPPCDPPDCPIERRGRP"
     gene            917..1831
                     /locus_tag="VGQ24_10025"
     CDS             917..1831
                     /locus_tag="VGQ24_10025"
                     /inference="COORDINATES: protein motif:HMM:NF025702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4397 domain-containing protein"
                     /protein_id="HEV8455219.1"
                     /translation="MRPIFPLSVLCLAVGLVNACKPEEVVQTEDIPTAGIRFINAVPD
                     TGAMDFRAVDIVENSASYNVAFRSTTLLYYKPARAGTRNFKIFRTPTATDPSATQIAT
                     AQTVVFDLAGEVLEAGKRYTYILWGYSRPGSTPAMQITRLTDDPTDPGAQVALRIINA
                     CVPGLCGASADGAVDVRVFTAAQTIAAPATTFPAVAALTASAYQNVATTTGCGTTSST
                     LPNCYTFDFRPVGGATAGAALASGAGPAGILEAVDLDAVPGTNVAGSAVSAILFPRSL
                     AGTQAVSFTTPGIIFVWDKRPPRTCALC"
     gene            1942..2433
                     /locus_tag="VGQ24_10030"
     CDS             1942..2433
                     /locus_tag="VGQ24_10030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455220.1"
                     /translation="MPNARFLPWLSALTAASVIVLPASALAQDKPKKERDLIAREELV
                     EADAKFPDLFQAVKRLRPHFLAQNRGPRTTGIQAPAGGGSMCNATLEPNCAARQVVST
                     VVAQVVYLDGTKSGDPDVLKGIRTADVEEVRYLSPNRAASEYGLGHEGGVILVKRYNP
                     TKP"
BASE COUNT          476 a          951 c          885 g          518 t
ORIGIN      
        1 tcgctggccc caacgtcact gccccgatcg gcggcgggct gccgcccctc gccggtgtca
       61 tcgccgacaa taccacgccg gtaccggggg gtgcagcgtg cgtgccgaac atccccgtga
      121 atgcctccga agccgggggg ggcaccacga cctgcggcac cctgttcgag gcgatgaagt
      181 gggaaaagcg gatcgagtcg gcctattccg ccttcgcggt ctggttcttc gatagccggc
      241 gctggggcga tctccctctc aatacgccgg tgcactgggc accgccgtat caggacctcc
      301 aggtgcgact ccgccaggga ttgaagatct acagcgtggg cggcggaacc aacccgactg
      361 ggagcgcggc gcggagtggt tacggctggt agtcgcgtgc taaggccgcg tcggcttgcc
      421 ggcgcggccc tgttcggcat ctccttgacg gcttgttaca ccttgcggcc cgtgcagggc
      481 gtggatccga aagttggcag tcgggtcgcg ttcgatgtga acgatgccgg ccgcgccgcc
      541 ctgggcggaa ccctgggacc tgagatcgcc caggtcgaag gccagctgct cgagaaggag
      601 aacggcagct acctgctcgc cgtgtccgcg gtgcggctgc tccgcggtac cgagcaagtc
      661 tggtcgggcg agcaggtccg tctcaattcg tcgtatctgg gtcccgcctt cgagcggaag
      721 ttttcggtag gccgctcgct cgggtttggt ttgattggcg tgggaggcat tactgcgttt
      781 tttgtcaccc gctcgctcct ggcgtcgggc aatgacgaca accggccgcc gccctgcgat
      841 ccccccgact gtcccattga gcgtcggggg cggccgtaaa cgatggatcg gcatctcaac
      901 ctctagggag tccgtaatgc gacccatctt cccactctcg gtgttgtgcc tcgcggtcgg
      961 cctcgtcaac gcctgcaagc cggaggaggt cgtccaaacc gaagatatcc ccaccgccgg
     1021 catccggttc atcaacgcgg ttcccgatac cggggccatg gacttccggg cggtagacat
     1081 cgtggagaac agcgcctcct acaatgtggc gttcaggagc accacgctcc tctattacaa
     1141 gcccgctcgc gccggcactc gcaacttcaa gattttccga actccgacgg ccacggaccc
     1201 gtcggcaacc cagatcgcca ccgcgcagac ggttgtcttt gatctggctg gcgaggtgct
     1261 ggaagcagga aagcgctaca cctacattct gtggggctac tcacggcccg ggtcgacgcc
     1321 cgccatgcag ataacccggc ttaccgatga cccgaccgac ccgggcgcgc aggtggcgct
     1381 caggatcatc aacgcctgcg ttccggggct ttgcggtgcc tccgcggacg gcgcagtgga
     1441 tgtcagggtc tttaccgcag cccagaccat cgccgcccca gccaccacgt tccccgcggt
     1501 cgcggcactg accgcctcgg cgtatcagaa tgtggcgaca accaccggct gcggtaccac
     1561 atcctccaca ctgcccaact gctacacctt tgacttcagg ccggtcggcg gagccaccgc
     1621 tggtgctgcg ctggcaagtg gcgcgggtcc ggccggtata ctagaagccg tggacctcga
     1681 tgcggtcccc ggcaccaatg tcgccggctc ggccgtcagc gcgattctct tcccgcgctc
     1741 gctggcaggg acccaggccg tgagcttcac gacgcctggt atcatcttcg tgtgggataa
     1801 gcgtccgccc cgcacctgcg cgctctgcta accggttcgt agggcgcatc gctgggccct
     1861 ggaagggggc cgtcgggcca aggctcggcg gcccttccct tttggagtga tacgctagat
     1921 ttcgaaaacg gaggacctcc catgcccaac gctcgatttc tgccctggct gtcagctctg
     1981 accgctgcaa gcgtcattgt ccttcccgct tcggccctgg cacaggacaa gcccaagaaa
     2041 gagcgggacc tcatcgcccg cgaagagttg gtcgaagcgg acgcgaagtt tcctgacctg
     2101 tttcaggcgg tgaagcggct gcgccctcac ttcctggctc agaaccgcgg tccccgcacc
     2161 accggaattc aggctcccgc cggcggcggc tcaatgtgca acgccacact ggagccgaat
     2221 tgcgccgcgc gccaagtcgt gagcactgtg gtcgcgcagg tcgtttacct cgatggcacg
     2281 aaatccggag accccgatgt tttgaaggga atccgcaccg cggatgtcga ggaggttcgc
     2341 tacctgagcc cgaaccgagc cgcatcggaa tatggtctcg gccacgaggg cggcgtgatc
     2401 ctggtaaagc ggtacaaccc gacgaagcct tagccacgct aacggcaaac tctactttga
     2461 tcgcgccggg cggccggcgc gtgctaggac cctataactt acagtttggg gagcggccca
     2521 gccgctggcg ctgctggtca ggcaggttct cgctacacct ccctgaaaaa ctcccgcaga
     2581 tcgatttcga gagccgggag attcgggtcg ggcccccaca ccaaccactc ggtcagaatc
     2641 tccggacgat cgtctgccgg tttcagcgtt cgatcagccg cgcatccgga tcgacgatac
     2701 agtactcccc gacctcggat ctctgatagc gcatccgttt gcgattgcga tcattgaacg
     2761 cggtgcagcg gcgcgggctc gcgccacgag cagctcgcca tccagcaact cgtagcggtt
     2821 cccgtcgtcg
//
LOCUS       DASYRV010000380         4412 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3677468, whole genome shotgun sequence.
ACCESSION   DASYRV010000380 DASYRV010000000
VERSION     DASYRV010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4412
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3677468"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..542)
                     /locus_tag="VGQ24_10035"
     CDS             complement(114..542)
                     /locus_tag="VGQ24_10035"
                     /EC_number="1.11.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA];
                     GO_process: GO:0006972 - hyperosmotic response [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0033194 - response to hydroperoxide
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEV8455221.1"
                     /translation="MPTSSASAVWEGGLRAGRGHFKAGSGAFEGDYSFRTRFEGARGT
                     NPEELIAAAHAACLSMALSAGLEKGGTPPTSISTKASCTVEKVGEGFKITRMRLEVQG
                     KVPGMNQSAFAKAAEDAKKGCPVSGALQGNVQFDLDAKLE"
     gene            complement(590..3352)
                     /locus_tag="VGQ24_10040"
     CDS             complement(590..3352)
                     /locus_tag="VGQ24_10040"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEV8455222.1"
                     /translation="MSARLARTLLLALPITTLLPGTSVLAQRPTAAPSRIEIPYKKFV
                     LANGLTLIVHEDHKAPIVAVNVWYHVGSKNEVPGRTGFAHLFEHLMFNGSENYDKDFF
                     GPLEQAGATDMNGTTSEDRTNYFENVPTNALDLALWMESDRMGHLTGAISQPKLDEQR
                     GVVQNEKRQGENEPYGKVWDFLTPKLYPANHPYSWTVIGSMEDLDAAKLDDVKEWFRT
                     YYGAANAVVVLAGDIDTETAKQKVEKYFGDIPAGPPLARQEAWIAKRTGSQRGIMQDR
                     VPQARIYKVWNIPGWATADADYLNLVSDVLSSGKSSRLFKRLVYDDQIATDVSATVDL
                     RELGGLFVIEASARPGIELGRVEKAVDEELRRLLMAGPTPAELRRVKTRYRAAFIRGV
                     ERIGGFGGKSDVLAQGEVLAGRPDYYQVRLDRVRQATPAQLLSSARQWLSDGVYSLEV
                     RPYPELQTARAAADRSKLPAPGSPPDTKFPELERATLSNGLKIVLARRPAIPQVRFDL
                     LLDAGFAADRAGIPGTASLAMAMLDEGTTRRTSLQISDQLAQLGANLATGSKLDVSSV
                     SLEALTENLDASLEIYGDVILHPSFPRSDFERLKKQRLAQIQQEKADPVGLALRVFPG
                     LLYGHGHAYSNPWTGSGTEESTQKITRDNLVRFHRDWFKPNHATLIVVGATTMAEIRP
                     KLERIFASWSPGEVPSKDIATVAQPPRPVVYLIDRPGSLQSLIIAGNIAPPKANPAEV
                     SIQAMNGVLGSDFSSRINMNLREDKHWAYGAYTFLRDARGQRPFVAYAPVQTDKTKEA
                     LVELDKELRGITKDRPIQPDELSRAQASLTLTLPGSWETMAALAGAIGDIVTFGLDDR
                     YYDTFAEKVRAQTVQSLTAAAADVVHPDQLVWVVVGDRSKIEPGLRELKLGEIRLIDT
                     DGRPVS"
     gene            complement(3454..3945)
                     /locus_tag="VGQ24_10045"
     CDS             complement(3454..3945)
                     /locus_tag="VGQ24_10045"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8455223.1"
                     /translation="MAAAPLPRSPAAPLPTDILLVEDSPLEAELTLKPLRELDGANRI
                     EVVRDGEEALDFMFGRGAFRHEVGWKPPRLVLLALKLPKVDGLDVLRAIRANSRTCLA
                     PVVVLTSSHDPRELAQCYQLGANSCVQKPVRYEEFWNAMQAVGRYWLALNQAPPPPAS
                     PIA"
     gene            complement(3945..>4412)
                     /locus_tag="VGQ24_10050"
     CDS             complement(3945..>4412)
                     /locus_tag="VGQ24_10050"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEV8455224.1"
                     /translation="VEELPTVPCDPVLTRIALTNLLSNAVKFTRPRQHATIRIRPVEF
                     DGQVGLAVQDNGVGFKMAYAGKLFGMFQRLHRPDEFEGNGAGLAMVQRIAHKHGGRVW
                     AESEPDAGATFYLTLGSGAGAPRADGQRGSMEDGRTGSSRTSNESNGNSTMDE"
BASE COUNT          735 a         1392 c         1423 g          862 t
ORIGIN      
        1 agggctgagc gcaaggggtg cggcgggggg aagtcggcgc ttgaagccgg agggactcag
       61 cccagttccg ccacccaccc cggttgccaa tggctggggc gaagccaggc ggtttactcc
      121 agcttagcgt ccagatcgaa ctgcacgttc ccctgtaggg ctccggagac gggacaaccc
      181 ttcttggcgt cttccgcggc tttcgcaaag gccgactgat tcatccccgg aactttgccc
      241 tgcacctcca ggcgcatgcg ggtgatcttg aacccctcgc ctactttttc cacggtgcac
      301 gacgccttgg tgctgatact cgtgggcggg gtgccgccct tctccagtcc ggctgacagg
      361 gccatgctga ggcaggccgc gtgtgctgca gcgatgagct cctcggggtt ggttccccgt
      421 gctccctcaa accgggtccg gaacgagtag tcaccctcaa atgcgcctga gcccgccttg
      481 aagtgtcccc ggcccgctcg caggcctcct tcccatactg cgcttgcact gctggttggc
      541 atgttcgtct ccaaaaaaca gcgtgaacag taaacgtgat tgctttgctc taactcactg
      601 gtctgccgtc cgtgtcgatg aggcggatct cgcccagctt cagctcgcgg agacccggct
      661 cgatcttcga gcggtcgccc accacaaccc agaccagctg atcgggatgc accacgtcgg
      721 ccgcggcggc ggtgagactc tgcaccgtct gggcccgcac cttctcggca aacgtatcat
      781 agtaacgatc gtcgagcccg aaggtcacga tgtcaccgat ggcaccagcg agcgccgcca
      841 tcgtttccca cgagcctgga agggtcaagg tgagtgatgc ctgggcccgg ctgagctcgt
      901 ccggttggat cggccgatcc ttggtgatac cgcggagttc tttgtcgagc tcgaccagcg
      961 cctccttggt cttgtcggtc tggaccggcg cgtaggccac gaacggtcgt tggcctctcg
     1021 catcccggag gaatgtgtac gcgccatagg cccaatgctt gtcttccctg aggttcatgt
     1081 tgatccggga gctgaagtcg cttccgagca ctccgttcat ggcctggatg ctcacttccg
     1141 cggggttcgc ttttggcggc gcgatgttac ccgcaatgat cagggactgg agcgagcctg
     1201 gccggtcaat cagatacacc acagggcgag gcggctgcgc gacggtggca atatccttcg
     1261 acggaacctc ccccgggctc caggacgcaa agatccgctc cagcttcggc cgtatctccg
     1321 ccatcgtggt ggctcccacg acgatcagcg tggcatgatt tggcttgaac cagtcgcgat
     1381 ggaaacgcac cagattgtca cgggtgatct tttgggtaga ctcctcggtg cccgatccgg
     1441 tccacgggtt ggagtaggcg tggccgtggc cgtagagcag tccggggaaa accctgaggg
     1501 ccagaccgac aggatcggcc ttctcttgct gtatctgggc cagccgttgc ttcttgaggc
     1561 gctcgaaatc ggaacgggga aacgacggat ggaggatcac gtcgccatag atctcgaggg
     1621 aggcgtcgag gttctcggtc agcgcctcga gtgacacact ggagacgtcg agcttcgaac
     1681 cggtggccag gttggcgccg agctgagcca gctggtcact gatctgaagg gaagttcgcc
     1741 ttgtggtgcc ctcgtccagc atggccatgg ccaggcttgc ggtgccgggt atcccggccc
     1801 tgtccgcggc gaagccggcg tccagcaaca ggtcgaagcg cacctgcggg atggccgggc
     1861 gccgggccag cacgattttc aagccgttgg acagggtcgc gcgctcgagc tcgggaaact
     1921 tggtgtcggg aggactcccg ggtgcaggca gcttcgagcg atcggcagcg gctcgcgcgg
     1981 tctggagctc ggggtaggga cgcacctcga ggctgtagac tccatcgctc agccactgcc
     2041 gtgccgagct caagagctgg gccggagtgg cctgccggac gcggtccagc cgcacctggt
     2101 aatagtccgg acggccggcg agtacttcgc cttgggcgag cacatcggat ttgccaccga
     2161 agcctccgat tcgctcgact cccctgatga atgcggcacg gtagcgggtc ttcactcgcc
     2221 gaagctcggc gggcgttggc cccgccatca ggagccgccg cagctcctcg tccacggcct
     2281 tctctacccg cccgagctcg atgcccggtc gcgcactcgc ctcgatcacg aagaggcctc
     2341 cgagctcccg gaggtccact gtagccgata cgtcagtggc gatctggtca tcgtagacca
     2401 accgcttgaa cagccgggag gatttcccgc tgctgaggac atcgctcacg aggttgagat
     2461 aatcggcgtc ggcagtggcc cagcccggga tgttccagac cttatagatc cgcgcctgcg
     2521 ggacccggtc ctgcataatg ccgcgctggc tcccggtccg cttggcgatc catgcttcct
     2581 gccgggctaa cggaggtccc gcgggtatgt cgccgaagta tttctctact ttctgcttgg
     2641 cggtctcggt atcgatgtct cccgccagga ccactacggc gttggcggcg ccgtagtagg
     2701 tccggaacca ttccttgacg tcgtccagct tggcggcatc caggtcttcc atcgatccga
     2761 tgacggtcca cgagtacggg tgattcgccg gatagagctt cggggtgagg aagtcccaca
     2821 ctttcccata tggctcgttc tcaccctggc gcttctcgtt ctgcaccaca ccccgctgct
     2881 catccagctt tggctggctg atggcgccgg tcagatggcc catgcggtcc gattccatcc
     2941 agagcgcgag atccagggcg ttggtgggaa cgttctcgaa atagttggtc cgatcctcgc
     3001 tggtggtgcc gttcatatcg gtggcaccgg cctgctccag agggccgaag aagtccttgt
     3061 cgtagttctc gcttccattg aacatcagat gctcgaacaa gtgggcgaac ccggtgcggc
     3121 cgggcacctc gttcttggag cccacgtggt accagacgtt gaccgccacg attggcgcct
     3181 tgtggtcctc gtggacgatc agggtaaggc cgttggccag gacgaacttc ttgtagggga
     3241 tctcgatccg gctcggcgcc gccgtgggcc gttgggccag gaccgacgtt cccggcagca
     3301 atgtcgtgat gggcaaggcc agcaggaggg ttcgggcgag tctggctgac acgagtgcct
     3361 cgggttgggc ggttcggcga cgggattctc gagctgggga cgatgccatg gatagacgcc
     3421 cgccggtacg caaaagttgc agttaccgac ttgctaggcg atgggcgaag ccggcggcgg
     3481 tggagcctgg ttcagagcga gccaataccg tccgaccgct tgcattgcgt tccagaactc
     3541 ctcgtatctc acgggctttt ggacgcagct gttggcgccg agctggtagc actgggccag
     3601 ctcgcgtggg tcatgggagg aagtgagaac aacaacgggg gcaaggcagg tgcgggagtt
     3661 ggcccggatc gctcgaagga catcgagtcc gtccaccttg ggaagcttga gtgccagcag
     3721 cacaaggcgc ggtggcttcc agcccacctc gtggcgaaag gccccacgac cgaacatgaa
     3781 gtcgagggcc tcctcaccat cccgaaccac ctcgatccgg ttagcgccat ccagctcccg
     3841 aagcggcttc agagtgagct cggcctcgag agggctatcc tcgaccagaa ggatgtcggt
     3901 tggaagcggg gcggcgggac tgcggggcag cggggcagca gccactactc gtccatggtg
     3961 ctgttaccgt tcgactcatt gcttgttcta ctactacccg tccgtccgtc ttccatactg
     4021 ccgcgctgcc catccgcccg gggggcaccc gccccgctgc cgagcgttag atagaacgtc
     4081 gctccggcat ccggctcgga ctctgcccag actcgtcccc catgcttgtg cgcgatccgc
     4141 tggaccatgg ccaggcccgc tccgtttccc tcgaactcgt ccgggcggtg gagccgctgg
     4201 aacatgccga acagcttgcc ggcataggcc atcttgaagc ccaccccatt gtcctgtacc
     4261 gcaaggccga cctggccatc aaactccact ggccggatcc gtatcgtggc gtgttggcgg
     4321 ggacgggtga acttgacggc attggagagc aggttggtca gcgcaatcct ggtcaggact
     4381 ggatcgcacg gcacggtcgg cagctcctcg ac
//
LOCUS       DASYRV010000381         4714 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2229532, whole genome shotgun sequence.
ACCESSION   DASYRV010000381 DASYRV010000000
VERSION     DASYRV010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4714
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2229532"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1282)
                     /locus_tag="VGQ24_10055"
     CDS             complement(<1..1282)
                     /locus_tag="VGQ24_10055"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEV8455225.1"
                     /translation="MSEVGCYRGSLLFLIFSLAACGESSLPLPATPSTERPNLVVVLV
                     DDLRFDEFGAAGHPYLETPNIDRLAAEGAWFVNAFHAVPLCSPNRATLLTGQFPSRHG
                     IIDNVARDLASHQLETFNIPLQAAGYRTAFIGKWHMGNDPTPRPGFDYWVAMPGQGHA
                     TDPELFEDGTLHKVPGYTTDLLTDRAVGFIRREYRHPFLVYLAHKAVHPDLVQRDDGS
                     IDPESDRGYIPAPRDEGRYKDKVFTRRESQSEIAADLEGKPAIRHALARLAPAPGSGP
                     AEHEHPATPWTGEETIRRRAEMILGVDEGLGRIMATLDSLEILDKTVIVFSSDNGFFF
                     GEHGLTTERRLPYEESIRNPLLLRYPPRIPAGSRPTGLALTVDLAPTLLEFARVPIGP
                     HIQGRSLIPLLGGTPPGWRQAVLVEFYTNEQPFPH"
     gene            complement(1279..3933)
                     /locus_tag="VGQ24_10060"
     CDS             complement(1279..3933)
                     /locus_tag="VGQ24_10060"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEV8455226.1"
                     /translation="MSDALNRLTAALADRYRIERELGQGGMATVYLAQDLRHDRKVAL
                     KVLRAELAAVIGAARFLQEIKTTANLQHPHILALHDSGEVDGTVFYVMPYVEGESLRD
                     RLTREKQLSVEEAIRITREVASALDYAHRHGVIHRDIKPENILLHDGSALVADFGIAL
                     AASRTGAGRITETGMSLGTPHYMSPEQAMGERELDARSDVYALGCVAYEMLSGEPPCT
                     GPTAQAILARVVTEEPRSLTLQRKTIPLHVEAAVIMALSKLPADRFASAAQFAEAFGN
                     PSLARPIGHTTSTAPSLASVRRGPAAWAPWAAVLAITGLAAWGWLRPKRVTRAPPVTR
                     FSIEFVGAGRVLDAQGSPLAVSPDGSRIVYLGENATGSRALYTRALDREDPVEIAGTV
                     GAMAPFFSPDGASLGFIQDNRIRKVALAGGAVTTISEASTSSPAWGLGDLIYFSTLAG
                     LFRVSAAGGQPELVAAPDSAKGDSYRWPDPLPDGKSVLVTLVRQGAPSLAAISLPDGR
                     LHEIGQGGMYPRWVDGGFIAFVQTDGTLFGARYDARRFRLTSAPGPVAEGVRFGPAFP
                     AKLGIARTGAVAYLGGQNTLRELVVVERPGRITPIAVPSRLYVGPRFSPDGQRLAFQV
                     LDVAGGLLVDLWTYDLRSGSLSRATFDSASINPEWKSDGKRLVYLTRGRVFSIATDGS
                     GARESLLAVPGRSFGEIQPARDGKALVLRDNPVGVGNNRDIWILSTGSGDSVRPLLRT
                     PFDERSIALSPDGKWLAYVSNEAGSDEVYLRRLEAGSGRWRVSRSGGFEPRWGSEGRE
                     LFFRLSDSVLSVGVQLQARAEPRIGPSRVVLVGNFDTDRNRPIWDVSPDGKRFAFTRT
                     QNEAGVRRINLVLHWFDRLRAAPSGVAR"
     gene            complement(3930..4286)
                     /locus_tag="VGQ24_10065"
     CDS             complement(3930..4286)
                     /locus_tag="VGQ24_10065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455227.1"
                     /translation="MRPFPHIESGKQQVSSGGGLAPLWSRDGKELFYLRGDKNMMAAR
                     VIPGATIRFADPVALFRVPEELLGAEALYYTPWDVARDGRFLMARLVGGEVAQAGGLV
                     VVENWIEELKVKVKPR"
     gene            complement(4302..>4714)
                     /locus_tag="VGQ24_10070"
     CDS             complement(4302..>4714)
                     /locus_tag="VGQ24_10070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455228.1"
                     /translation="LSPDGKWLAYVSNEAGSDEVYLRRIEAGSGRWRVSRSGGFEPRW
                     GPEGRELFFRLSESGLSAGVQLLAGAEPRIGPSRVVFVGNFDGDRNRPVWDVSPEGRR
                     FAFTRTQNEAGVRRINIVLHWFDRLRAAPSGVAR"
BASE COUNT          786 a         1592 c         1609 g          727 t
ORIGIN      
        1 ggtgcgggaa cggctgctcg ttggtgtaga actccaccag caccgcttgg cgccagcccg
       61 gtggtgtacc gcccaacaac ggaatcagcg agcgcccctg gatatggggt ccgatcggta
      121 ctctggcgaa ttccaacagc gtcggagcga gatccacggt gagtgctaac ccggtgggtc
      181 gtgagccggc gggaatcctg gggggatagc gcagtagcag cgggttacgg atcgattcct
      241 cgtacggcag acgccgctca gtggtcaacc cgtgctcccc gaagaagaag ccgttgtcgc
      301 tgctgaacac gatgacggtc ttgtcgagaa tctcgaggga gtcgagggtc gccatgatac
      361 gccccagacc ctcgtcgacg ccgaggatca tctcggcgcg gcggcggatg gtctcctcac
      421 cggtccaggg cgtggccgga tgctcgtgct cggcaggtcc gctccccggc gccggggcga
      481 gcctggcgag ggcgtgacgg atcgccggct tcccctcgag atcggcggcg atttcggact
      541 gagattcgcg ccgggtgaac accttgtcct tgtagcggcc ctcgtcgcgg ggcgcgggga
      601 tgtagccccg atcgctctcc gggtcgatcg agccgtcgtc gcgctggacc aggtcggggt
      661 gcaccgcctt gtgcgccagg tacaccagga acgggtgtcg gtactcgcgc cgaatgaacc
      721 cgaccgcgcg gtcggtcagg aggtcggtgg tgtaccccgg caccttgtgg agcgtcccgt
      781 cctcgaacag ctcggggtcg gtcgcgtgcc cttggcccgg catcgccacc cagtagtcga
      841 accccggccg gggggtcggg tcgttcccca tgtgccactt gccgatgaac gcggtccggt
      901 accccgccgc ctgcaatggg atgttgaagg tctcgagctg gtggctggcc agatcgcggg
      961 cgacgttgtc gatgatgccg tggcgggaag ggaactggcc ggtgagcagc gtggctcgat
     1021 tgggcgagca gagcggcacg gcatggaacg cattgacgaa ccaggcgccc tcggcggcca
     1081 ggcgatcgat gttgggggtc tcgagatagg gatggcctgc cgcgccgaac tcgtcgaagc
     1141 gaaggtcgtc caccagcacc acgacgaggt tgggtcgctc cgtcgagggc gttgcgggga
     1201 gtgggagcga ggattcgccg cacgcggcga gggagaagat cagaaagagg agggagccgc
     1261 gatagcagcc gacttcgctc atctggcaac acctgacggg gcggcgcgca gccggtcgaa
     1321 ccagtgaagg acaaggttga ttcggcgaac ccctgcctcg ttttgggtgc gggtgaaggc
     1381 gaagcgtttg ccgtcggggg aaacgtccca gataggcctg ttgcggtcgg tgtcgaaatt
     1441 gcccaccaac accacgcgcg aaggaccgat tcggggctcg gcacgcgcct ggagctgcac
     1501 gccgaccgag aggaccgaat cgctcaagcg gaagaacaac tcccgacctt ccgagcccca
     1561 gcgcggctcg aagcccccgc tccgcgacac ccgccaccgc ccgcttcccg cctccagccg
     1621 cctcaggtag acctcgtccg acccggcttc gttcgagaca taggccagcc acttcccgtc
     1681 cggagagagc gcgatgctcc gttcgtcgaa gggcgtgcgc aagagcggcc gcaccgagtc
     1741 tccgcttccc gttgaaagga tccagatgtc tcggttgtta cctacaccaa cgggattgtc
     1801 tcgcagcacg agcgcctttc cgtcgcgggc cggctgaatc tcaccgaagc tgcgaccggg
     1861 cacagccagg agcgactccc gcgccccact tccgtcggtg gcaatgctga acacgcgtcc
     1921 gcgggtcaga tacaccaggc gcttcccgtc cgatttccac tcgggattga tgctggccga
     1981 atcgaaggtc gctcgcgaaa ggctgccgct tcgcaggtca taggtccaga gatcgaccag
     2041 gagcccgcct gcgacatcca ggacctggaa cgcgaggcgc tggccatccg gggagaaccg
     2101 gggacccacg tagagcctgc tggggacagc aatcggagtg atgcgtcccg gtcgttccac
     2161 cacgaccagc tcacgcagcg tgttctggcc gccgagatat gccaccgccc cggtgcgggc
     2221 gattcccagt ttggcgggga acgccggccc gaaccgcacc ccctccgcga ccggccctgg
     2281 agcactggtc agccggaacc ggcgggcgtc gtaccgcgcg ccgaacaggg tgccgtcggt
     2341 ttgtacgaag gcgatgaacc cgccatctac ccagcgcgga tacatcccgc cttgcccgat
     2401 ctcgtgcagc cgtccgtccg gcagcgaaat cgccgccaga ctcggcgcac cctgccgcac
     2461 cagcgtcacc agtacgctct tgccgtcagg cagcgggtcg ggccagcgat acgagtcgcc
     2521 tttcgcgcta tcgggtgccg cgacgagctc gggctgcccg cccgcggcgc tgacccggaa
     2581 gagtcccgcc aaagtggaga agtagatcag gtcgcccaat ccccaggcgg gagagctggt
     2641 actagcctcg gagatggtcg tcaccgcgcc gccggcgagc gctaccttcc gaatccggtt
     2701 gtcctgtatg aagccgagac tcgctccatc gggcgagaag aacggggcca tggctccgac
     2761 cgttccggcg atctctacgg gatcctcgcg gtccagggca cgcgtgtaga gtgctcgcga
     2821 tcccgtcgca ttttctccca gatacacgat ccgcgagccg tcgggagaaa ccgcgagcgg
     2881 cgacccctgg gcatccagaa cacggcccgc tcccacgaac tcgatggaaa accgggtgac
     2941 cggtggggct cgagtcaccc gcttgggccg cagccagccc caggcggcga gcccggtgat
     3001 ggcaaggact gcggcccagg gcgcccaggc ggccggccct cggcggaccg atgccaggct
     3061 cggcgcggtc gaggtggtgt ggccgatcgg ccgggccagg ctcggattgc cgaacgcctc
     3121 ggcgaactgc gccgcgctgg caaaccggtc ggccggcagc ttggagagcg ccatgatgac
     3181 ggccgcttcg acgtggagcg ggatggtctt ccgctgcagc gtgagcgagc gcggctcctc
     3241 ggtcaccacc cgcgcgagaa tcgcctgagc agtggggccg gtgcagggcg gctcgccgct
     3301 gagcatctca taggccacgc agcccagggc atacacgtcg ctccgcgcgt cgagctcccg
     3361 ctcccccatg gcttgctcgg ggctcatgta atgcggggtg ccaaggctca tgccggtctc
     3421 ggtgatgcgg cccgcgccgg tgcggctcgc ggcgagcgcg atgccgaagt cggccaccag
     3481 cgcactgccg tcgtggagca ggatgttctc cggcttgatg tcccgatgaa tgaccccatg
     3541 gcgatgggcg tagtcgagcg cgctggccac ctcccgggtg atccggatgg cttcctcgac
     3601 agagagctgc ttttcccggg ttaggcgatc gcggagcgat tccccctcga cgtagggcat
     3661 gacatagaag accgtgccat ccacctcgcc cgaatcatgc agggcgagga tgtgagggtg
     3721 ctggaggttg gcggtggtct tgatctcctg gaggaaccgg gcggcgccga tcacggcggc
     3781 gagctcggct cgtaggacct tgagggcgac cttgcggtcg tgccgcaggt cctgcgcgag
     3841 gtagaccgtg gccatgccgc cctgacccag ctcgcgctcg atccggtacc ggtcggccag
     3901 ggcggccgtg agccgattca gggcgtcact caccgcggtt tcactttcac cttcagctcc
     3961 tcgatccagt tctcgaccac cacgagccca ccggcctgag cgacttcccc gccgaccagc
     4021 cgcgccatca ggaagcggcc atcgcgggcg acatcccagg gcgtgtagta caacgcctcc
     4081 gcgccgagca gctcctcggg aacccggaag agggcgaccg ggtcggcgaa acggatcgtc
     4141 gcgccgggga tcacccgggc ggccatcatg ttcttgtcgc cgcgcaaata gaacagctcc
     4201 ttgccgtccc gcgaccagag cggcgccagc ccgccgccgc tggagacctg ctgcttcccg
     4261 gattcgatat gggggaaggg gcgcacgctc gcgtgcgacg ctcatcgtgc aacaccggac
     4321 ggcgcggcgc gcagccggtc gaaccagtga aggacaatgt tgattcggcg aacccctgcc
     4381 tcgttctggg tgcgggtgaa ggcgaagcgc ctgccctcgg gggaaacgtc ccaaaccggc
     4441 cggttgcggt cgccgtcgaa attgcccacg aacaccacgc gcgaaggacc aattcggggt
     4501 tcggcacccg ccaggagctg cacgccggcc gagaggcccg actcgctcaa gcggaagaac
     4561 agctcccgac cttccgggcc ccaacgcggc tcgaagcccc cgctccgcga tacgcgccac
     4621 cgcccgcttc ccgcctcgat ccgcctcagg tagacctcgt ccgacccggc ttcgttcgag
     4681 acatatgcca gccacttccc gtccggagag agcg
//
LOCUS       DASYRV010000382         3803 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_154022, whole genome shotgun sequence.
ACCESSION   DASYRV010000382 DASYRV010000000
VERSION     DASYRV010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3803)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3803)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3803
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154022"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..395
                     /locus_tag="VGQ24_10075"
     CDS             <1..395
                     /locus_tag="VGQ24_10075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEV8455229.1"
                     /translation="AYCAGFNFRGADQQKKVGTLSGGERNRLHLAKLLKRGGNLLLLD
                     EPTNDLDVDTLRALEDALLSFAGCAVVISHDRWFLDRIATHLLAFEGDSEVYWFEGNF
                     EEYAADFRRRKGVPVDQPHRIRYKKLVH"
     gene            396..2552
                     /gene="glgP"
                     /locus_tag="VGQ24_10080"
     CDS             396..2552
                     /gene="glgP"
                     /locus_tag="VGQ24_10080"
                     /inference="COORDINATES: protein motif:HMM:TIGR02094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HEV8455230.1"
                     /translation="MAVKVTALPPRLEGLTALVTNLAWSWNREARQLLRSIDLPLWRR
                     VRHNPIQLLREIPPARLEQLAHDPGFLHQYDLVMEWMAENQAPDRTWFARRYPKLLNR
                     PVAYFCAEFGFHNSVPIYSGGLGVLAGDHCKSASDLGVPLVGVGLSYMKGYFDQRLRS
                     DGWQEDSDDHVDPNLTPLVELTGSAGEAWLAVVETFGRPVHVRVWSMRVGRVPLYLLD
                     TNLEVNHPEDRTLLNKLYGGGPDLRLRQEWLLGVGGVRVLRAVGLSPGVWHANEGHAA
                     FMMLERVRELTAAGKSFAEALSEVRRTTVFTTHTPVPAGHDRFDLEQLVQCTGPIWEA
                     MGASREAVLSLGRHPAEQDGGFQMTVMALHLAGRVNAVSERHATVSRAIWQPLWPERA
                     PEEIPILPITNGVHLATWMANPMMAFLDNQLGSDWGSRLDDPTLWEQLRAVDPGALWA
                     THVELKGTLLGFIREEARRRFAQEWTEANQVVAAGTLLHPYALTLGFARRFATYKRAN
                     LLFRDVDRLQRLLCDPRRPVQIIFAGKAHPADNPGKEVLQQIYRWTHNPFFEGRVAFL
                     EDYDMHLAHALAEGVDLWVNLPRVPLEACGTSGMKAALNGVPQLGTIDGWWEEGYDGS
                     NGWAIPKPSGTEEVEAQDASDAEHLYRLLEEDIVPLYYARDANGVPLGWVDRMRNAIR
                     VAGARFTARRMVLEYTERFYLPAIRGERFTDDPPIR"
     gene            2443..>3803
                     /locus_tag="VGQ24_10085"
     CDS             2443..>3803
                     /locus_tag="VGQ24_10085"
                     /inference="COORDINATES: protein motif:HMM:TIGR02095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch synthase"
                     /protein_id="HEV8455231.1"
                     /translation="MPAPASLPGGWSSSTPSASTYRPSAASGSPTTPPSAKPSPERRS
                     PERERRPHSALHTARGEPVTVVHVAAEYYPYARSGGLAEAVANLARYQSGAGVRTVAL
                     LPLYRQTRQTAGEVVEVGEPFRIRLGPREETGRLLRPRDARPGAAIYFIEHEGFFDRE
                     RLYGDTSGDYPDNHLRYAFFCLAVLEALPRLVVGPALLHAHDWHAALALVYLRTRYAR
                     EPEYLGLRTVLSVHNAGYQGHYAPGVLRELGLPGELFTWQHLEWYGKLNILKGGLVFA
                     DRVVTVSPNHAKELKTPGGGFGLHEVFDWLGPRFSGILNGIDQAAWDPAHDPHIPAPF
                     SREDPAGKAANKREVQRLFRLREDPAAPLLSMAARLVTQKGLDLILQSPALFAMHGQY
                     VFIGAGEPRFEAALTGLASSRPDRIAVNTDFTDRLEHLLIAGADFLLMPCQYEPCGLT
                     QMRA"
BASE COUNT          604 a         1296 c         1224 g          679 t
ORIGIN      
        1 gtgcctattg cgcaggcttc aactttcgcg gcgccgacca gcaaaagaaa gtgggcacgc
       61 tctcgggggg agagcggaac cggcttcatc tcgccaagct gctcaagcgc ggtggcaacc
      121 tgctgctgct cgacgagccg accaacgatc tcgacgtcga tacgcttcgc gcgctggagg
      181 acgcgctgct ttccttcgca ggctgcgccg tcgtcattag tcacgaccgc tggtttctcg
      241 atcgcatcgc gacgcacctt ctggccttcg agggcgacag cgaggtttac tggttcgagg
      301 gcaacttcga ggaatacgcg gccgacttcc ggcgccggaa gggtgtcccg gtggatcagc
      361 cccaccggat ccgctacaag aagttggtgc actaagtggc ggtcaaggtc accgcacttc
      421 cgccgcgtct cgagggcctc actgcgctgg taaccaatct cgcctggagc tggaatcggg
      481 aggctcgcca gctgctccgc agcatcgact tgccgctctg gcgccgagtc cgccacaatc
      541 ccattcagtt gctgcgcgaa atcccgccgg cgcggctgga gcagctggcg cacgatcctg
      601 ggttcctgca ccagtacgac ctcgtcatgg aatggatggc ggagaatcag gcgcccgatc
      661 gaacctggtt tgcccggcgc tatcccaagc tgctcaaccg cccggtcgcc tatttctgcg
      721 cggagttcgg cttccataat tcggttccga tctacagcgg tggactcggc gtactggccg
      781 gggatcactg caagagcgcg tcggacctgg gtgtgccact ggtcggcgtc ggcttgagct
      841 acatgaaggg ctatttcgac cagcggctgc gcagcgatgg ttggcaggag gacagcgacg
      901 atcacgtcga tcccaacctg accccgctgg tcgagctcac cggcagcgct ggtgaagcgt
      961 ggctggccgt cgtggagacc ttcggacgtc cggtgcacgt gcgcgtctgg tccatgcgag
     1021 tcggtcgagt gcccctctac ctgctcgaca cgaatctcga ggtgaatcac cccgaggacc
     1081 ggaccctgct caacaagctg tatggcggcg gccctgatct gcggctgcgg caggaatggc
     1141 tcctcggggt cggtggcgtg cgcgtgctcc gcgcggtggg actctccccg ggagtgtggc
     1201 acgccaatga aggacatgcc gcgttcatga tgctggagcg cgtgcgggag ctcaccgccg
     1261 ccgggaagtc cttcgcggaa gcgctgagcg aggtccgccg gaccaccgtg ttcaccacgc
     1321 acacacccgt gcccgcggga cacgaccggt tcgacctcga gcagctggtc cagtgcaccg
     1381 gtcccatctg ggaagcgatg ggcgccagcc gcgaagcggt gctctcgctc gggcgccatc
     1441 cggcggagca ggacggcgga tttcagatga cggtcatggc gctccacctc gcgggccggg
     1501 tgaacgcggt ctccgagcgg cacgcgacgg tctcccgggc catctggcaa ccgctctggc
     1561 ccgagcgcgc gccggaggaa atccccatcc ttccgatcac caacggggtc catctggcaa
     1621 cctggatggc caatcccatg atggcgttcc tcgataacca gctcggttcc gattggggct
     1681 cccggctcga cgatcccacc ctgtgggagc agcttcgggc ggtcgatccc ggtgccctct
     1741 gggcgaccca cgtcgagctc aaggggaccc tgctgggctt catccgtgag gaagcgcgcc
     1801 ggcgctttgc ccaagagtgg accgaggcaa accaggtcgt cgccgccggc accctgctgc
     1861 atccctatgc gctcaccctc ggctttgctc ggcgcttcgc cacctataag cgcgctaacc
     1921 tcctcttccg ggatgtggac cggcttcagc gcttgctctg cgacccccgc cgcccggtcc
     1981 agatcatctt cgcaggaaag gcgcacccgg ccgataatcc gggcaaggaa gtcctccagc
     2041 agatctaccg ctggacccac aaccccttct ttgagggccg ggttgccttt ctggaggatt
     2101 atgacatgca ccttgcgcac gccctggcgg aaggcgttga tctctgggtc aaccttcccc
     2161 gggtgccgct cgaggcctgc gggactagtg gcatgaaggc cgccctgaac ggggtgcctc
     2221 agctcggcac gatcgatggc tggtgggaag aggggtatga tggtagtaac ggatgggcca
     2281 ttcccaagcc gtccggaacc gaagaggtcg aggcccagga tgcgtccgat gcggaacacc
     2341 tctaccggct gctcgaggag gacattgtcc ccctctatta cgcccgggac gcgaacggcg
     2401 tcccgctggg ctgggttgac cgcatgcgca atgcgatccg agttgccggc gcccgcttca
     2461 ctgcccggcg gatggtcctc gagtacaccg agcgcttcta cttaccggcc atccgcggcg
     2521 agcggttcac cgacgacccc cccatccgct aagccgagtc ctgagcgacg ctcgcccgag
     2581 cgggagcgcc gtccgcattc cgctctgcac accgcgcgcg gggagcccgt cacggtcgtc
     2641 cacgtcgccg cggagtatta cccctatgcc cggagtggcg gcctcgcgga agccgtggcc
     2701 aatctggccc gctaccagtc gggggccggt gttcgcaccg tcgcgctgct tccgctctac
     2761 cggcagactc gtcagacggc cggagaggtc gtcgaggtcg gcgagccgtt ccgcatccgg
     2821 ctcgggccca gggaagagac tggacgtctg ctgcgaccgc gcgacgcgcg gcccggagcc
     2881 gcgatctact tcatcgagca cgaggggttc ttcgatcggg agcgcctcta cggtgatacc
     2941 agcggcgatt atcccgataa tcatctccgc tatgccttct tctgcctcgc cgtgctcgag
     3001 gcgctgcccc ggctcgtggt cggccccgca ttactgcacg cgcacgactg gcacgcggcc
     3061 ctcgccctgg tctacctgcg cacgcgctac gcccgggaac cggagtatct gggcctgcgg
     3121 acggttctct cggtccacaa tgccggctat caaggccact acgctcccgg cgtcctccgg
     3181 gagctcggcc tgcccggcga gctctttacc tggcagcacc tcgagtggta cggcaagctc
     3241 aacatcctga agggcggact cgtcttcgcc gaccgagtag tgaccgtcag cccgaatcac
     3301 gccaaggagc tcaagacccc cggtggcggg ttcgggcttc acgaggtatt tgactggttg
     3361 ggtccgcgct tctccgggat tctgaacgga atagaccagg ccgcctggga cccggcgcac
     3421 gatccacata tcccggctcc tttttcgcgc gaagaccccg ccgggaaggc cgccaacaag
     3481 cgcgaagtcc agcggctctt tcggttgcgc gaggatcccg ccgcgccatt gctctcgatg
     3541 gcggcgcgtc tggtgacgca gaaagggctg gacttgatcc tccagagtcc ggcactcttc
     3601 gcgatgcacg gccagtatgt cttcatcggg gccggcgagc cgcgcttcga ggcggcgctc
     3661 acgggtctgg cctcgtcgcg tccggaccgg attgccgtca acaccgattt cactgatcgg
     3721 ctggagcatc tcctgatcgc cggcgcggac ttcctgctga tgccttgcca gtacgagccc
     3781 tgcggcctca cccagatgcg ggc
//
LOCUS       DASYRV010000383        10352 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_154486, whole genome shotgun sequence.
ACCESSION   DASYRV010000383 DASYRV010000000
VERSION     DASYRV010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10352
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154486"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..422
                     /locus_tag="VGQ24_10090"
     CDS             <1..422
                     /locus_tag="VGQ24_10090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455232.1"
                     /translation="PARVLGRSGEWVRVQLEGWMRAGDLQSAAGAAVTGVTAAEVRSD
                     PSRYLGRTVEWRLQLIAVQTADELRTEMPKGQNYLLTRGPLPEPGFVYVTVSDAQAAE
                     FRTAPALQEMTLRVTIKAARSKYLTTPIVEYVSRVVE"
     gene            429..800
                     /locus_tag="VGQ24_10095"
     CDS             429..800
                     /locus_tag="VGQ24_10095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455233.1"
                     /translation="MNDLLKQRINRLLDPLDDERGYQVLDFVEFLNSKYAERGQPSGI
                     LAKITETVENTMRAGKLPIQAISGTMGLMDSAAKVMKGLAAAGQAVVDEAVKAAESTS
                     KRELPGEPESPPPTDIRTISP"
     gene            836..2326
                     /locus_tag="VGQ24_10100"
     CDS             836..2326
                     /locus_tag="VGQ24_10100"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEV8455234.1"
                     /translation="MAAPAAKAPPQTSAPSEFIRGIGPLAAISLVVGSMIGSGIFIVS
                     ADMSRQVSPWGPGALLLVWLITGAVTVTGALAYSELAAMMPRAGGQYVFLREGLSPAA
                     GFLYGWTLFMVIQTGTIAAVAVAFGKFLGVLLPGVSPDVFLPLGRLHLPGATDAIQLG
                     LSPQRLVAIGMIAVLTLLNIRGVRLGAAVQTVFSVAKIGALAALVLLGLTLFRRPDVA
                     AANFGHFWGTGDWSLAVLPAVGAAMVGSLFASDAWNNVTFAAAEVREPTKNLPRALAL
                     GTGLVSVLYVLANVAYLNVLPFYGDPNGQDVLARGLQYAAQDRVGTAAIEVALGAGAA
                     TIMAVAILLSTFGCNNGLILSGPRVYYAMARDRLFFRNAGKLHPLYRTPVFGLIAQAL
                     WASVLCISGTYGQLLDYVIFAALVFYFLTTLALFRLRRTRPELPRPVRAFGYPLLPAL
                     YMAAVAALMIVLLIYRPLYTWPGLLIVASGVPVYLIWRRSSQRLSA"
     gene            2458..3915
                     /gene="guaB"
                     /locus_tag="VGQ24_10105"
     CDS             2458..3915
                     /gene="guaB"
                     /locus_tag="VGQ24_10105"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016291787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEV8455235.1"
                     /translation="MSVIRPKVGLTFDDVLLVPRHSAVHPRDVSTATRFSRTISLNIP
                     LVSAAMDTVTEADMAIAMARAGGIGVLHKNMTVERQAAEVDRVKRSESGMILNPITLG
                     PDRPLREAAALMRRFKISGVPIVDGQGRLVGIITNRDLQFERNLEQPIRDAMTKEKLV
                     TAPIGTDLDEAERILAKHRIEKLPVVDAQGVLKGLITVKDIFKRREHPLANKDQHGRL
                     RVAGAVGGGPDAVVRARALVSAGADVIVVDSAHGHSEGVLGTIDQLRDAFPDIQLVAG
                     NIATEAGARELVRRGVDAVKVGIGPGSICTTRVVTGVGVPQVTAILDSLRGADDVPLI
                     ADGGVKYSGDAVKALAAGASSVMMGSMLAGTEESPGESVLAEGRRFKMIRGMGSLSAM
                     QDGSADRYFQEGEMAASKMVPEGIEGRVPYKGPVADVLYQMVGGLRSGMGYCGVGTIP
                     QLQCDVEMIQITSAGLRESHPHDVTITREAPNYSA"
     gene            3971..5482
                     /locus_tag="VGQ24_10110"
     CDS             3971..5482
                     /locus_tag="VGQ24_10110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEV8455236.1"
                     /translation="MNLWATKSVAALRAEAEATHERSLKRALTATNLTMLGIGAIIGA
                     GIFVLTGLAAALHAGPAVVLSFVVAAIACGLAGLCYAEMASTVPVAGSAYTYSYATMG
                     EFAAWIIGWDLVLEYAMGAATVGVGWSGYFVSLLDYFGLHLPTIVTSAPLRWCTAADV
                     AGAVMACSQPGWNRTGSLFNLPAVLIVLLATTILVVGIKESAKVNNLIVILKVAVVLL
                     FIIFGLQYVNPENWKPFIPPNTGHFGDFGWSGIFRGAGLIFFAYIGFDAVSTAAQEAK
                     NPQRDMPIGILGSLGICTLLYVLVSLVLTGLVRYDQLNVGHPVALAVERVSQLSWLRP
                     FITLGAVLGLGSVVLVMLLGQSRVFYSMSRDGLIGPWAGKVHPQFRTPYLSTIYVGVV
                     VAFITGTFPIQILGELVNIGTLLAFVLVCVGVWILRRTRPDLDRPFRTPLVPLVPILG
                     VLACLGLMATLPADTWLRLFVWLLIGFVIYFSYGRKHSVLQREREQQALKKSA"
     gene            5539..6984
                     /locus_tag="VGQ24_10115"
     CDS             5539..6984
                     /locus_tag="VGQ24_10115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEV8455237.1"
                     /translation="MDLFRRKSVTALQAEAASDQSLKRALGPLNLTLLGVGAIIGTGI
                     FVLTGTVAAQNAGPAVILSFVLAGIASILAALCYSEFASLVPMAGSAYTYGYATLGEF
                     VAWIIGWDLVLEYALSATTVAIGWSGYVVSFLNDLGIHIPAHWQAARGTVVTLADGTT
                     TTAILNLPAVFIIAVVTTLLVVGIKESASVNNVIVFIKVAVVLLFIVMAAPHVNPDNW
                     HPFIPPNTGSREHFGFSGVVAGAAIVFFAYIGFDAVSTAAQEAKNPQRDMPIGIIGSL
                     IVCTVLYIVVSAIATGVVPYAQLDVPAPIAKVADHVGLGVLSSLIKLGAIAGLSSVIL
                     VQLLGQSRVFYSMSRDGLLPPFVRRIHPRFRTPYITSVVTGLAVAIPAAILPVRDAAK
                     LVSIGTLLAFLIVCSGVLVLRIREPNLPRPFKTPFVWFVAPAGALSAAYLMFYLDIET
                     WLRLLIWLAIGLAIYFLYSRTHSRLAVGSNE"
     gene            7025..8095
                     /locus_tag="VGQ24_10120"
     CDS             7025..8095
                     /locus_tag="VGQ24_10120"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF013528.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004527 - exonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional oligoribonuclease/PAP phosphatase
                     NrnA"
                     /protein_id="HEV8455238.1"
                     /translation="MPLSLSPEKAALAHAFATALRPGQRVCITTHVNPDGDGLGSEVG
                     LVHLLRAQGIEAVITNPSPTPPRFSFLFDDLPAVDRTPEAVKELRRADLIIVLDISDL
                     TRLGMLIETVKDRGVPVACVDHHVSTGDLPPGPRYLDPDAAATGELIFELAKGNDWPV
                     TRAVARALYVAILTDTGGFRFSNTRPRTLRVAADLLETGVDAERIYLEVYAKAPEGRP
                     RLFAEALQTLVVEHEYGLAWVTVPPGAIERLGVSSDDLDGVVEFPRSIEGVRMALLFR
                     EIAQGRVKVSLRSVGDVDVAAFAKPYGGGGHTKAAGLSLTGSLAEVQSKVLKAAREYL
                     GTDGGRNAEVDGRKSRVASQGS"
     gene            8207..8437
                     /locus_tag="VGQ24_10125"
     CDS             8207..8437
                     /locus_tag="VGQ24_10125"
                     /inference="COORDINATES: protein motif:HMM:NF013286.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HEV8455239.1"
                     /translation="MDIFDRIERTLDTLRPYIASHRGHVEVVDFDEQEGVLLLRLGGT
                     CHGCSASSVTLKQGIESRLREMVPEVKHVEAV"
     gene            8474..9631
                     /locus_tag="VGQ24_10130"
     CDS             8474..9631
                     /locus_tag="VGQ24_10130"
                     /inference="COORDINATES: protein motif:HMM:NF022077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HEV8455240.1"
                     /translation="MRAYLGNPCRQAYDLTESLEARVTAALARIQNPRLENDLLSAGM
                     IRDLTVTDEGRVSFTFLLAPEDPATLVRSARAAVAAVEGVRKDEIKISVTNPAGPTRP
                     THGPPQSAAANPPVPPAQQPMDQPNLGKIIAVSSGKGGVGKSTVAANIAVALAQAGLR
                     VGVMDADVYGPNIPRMFGVNERPPVFGGKIQPLEAHGVKLMSLGFLVERDAPAIWRGP
                     IIMKIVNQFLRDVDWGQLDYFIVDLPPGTGDAQLSLVQATHVSGALIVTTPQEVAVGD
                     ALRGAKMFERVGVPIIGVVENMSGFTDPETGRRFDLFSSGGGQRLADEIGAPLLGSVP
                     LQPQLAALADDGQPVLIAQPESPAARSLRDIAESLQQKTVGRGVALPILRG"
     gene            9831..>10352
                     /locus_tag="VGQ24_10135"
     CDS             9831..>10352
                     /locus_tag="VGQ24_10135"
                     /inference="COORDINATES: protein motif:HMM:NF014003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent chlorinase/fluorinase"
                     /protein_id="HEV8455241.1"
                     /translation="MSFVTLLTDFGTGDSYVAEMKGAILTRTPTAVLVDLTHGIHPGD
                     IRSAAYVLGRTWHQFPPGTIHLVVVDPGVGTTRAALAFSAHGYGFVGPDNGVFTPVLH
                     DAEVEVVVLPTPDGASPTFHGRDLFAPAAAALAGGASLSTLGEPFSGIPERLAYTEPH
                     YEGKSVVGEIVYID"
BASE COUNT         1672 a         3352 c         3344 g         1984 t
ORIGIN      
        1 caccggcccg ggtgctcggc cgctctggtg aatgggttcg ggtacaactc gagggttgga
       61 tgcgtgccgg cgatctccag tcggccgctg gagccgccgt cacgggggtc acggctgccg
      121 aggtgcgatc cgatccctcc cgctacctcg gccggacggt tgagtggaga ctccagctca
      181 ttgccgtgca gacggcagac gagcttcgga ccgagatgcc caaaggccag aattacctgc
      241 tgacccgggg accgttaccc gagccgggat tcgtctacgt gaccgtgtcg gatgcccagg
      301 cagcggagtt ccgaacggct ccggcgttgc aggagatgac gctccgagtc accatcaagg
      361 cggcacggtc caagtatctg actactccga tcgtcgagta cgtgtccaga gtggtggagt
      421 aagctcccat gaacgatctc ctcaagcagc ggatcaaccg cctcctcgac cccctcgacg
      481 acgagcgcgg gtaccaggtt ctcgacttcg tcgagttcct caacagcaag tacgccgaac
      541 ggggacagcc cagcggcatc ctggccaaga tcaccgagac ggtggagaac accatgcgag
      601 ccgggaagct gccgattcag gccatcagtg gaacgatggg cctgatggat agcgccgcga
      661 aggtcatgaa gggactcgcc gccgcagggc aggccgtggt ggatgaggca gtcaaggcgg
      721 ccgaaagtac gtcgaaacgg gagctgcctg gagagcccga gtccccgccc ccgactgata
      781 tacggacaat ctccccctga gattgaagaa caactccact aaatcggggt actgaatggc
      841 cgcacccgcc gccaaggctc cgcctcaaac gtccgcaccc tccgaattca tccgcggcat
      901 cgggccactc gccgctatct ccctcgtcgt aggatcgatg atcggctccg gaatcttcat
      961 cgtgtctgcc gacatgtccc gacaggtctc accttggggt cccggggcgt tgctgctggt
     1021 gtggctgatc accggcgcgg tgacagtcac cggcgcactg gcgtattccg agctggcggc
     1081 gatgatgcct cgagcgggcg ggcagtacgt cttcctccgc gagggactgt ctccggcggc
     1141 cgggtttctc tacggctgga ccctcttcat ggtgatccaa accgggacca ttgcggccgt
     1201 cgcggtggcc ttcggcaagt tcttgggcgt gctgctgcct ggcgtcagtc ccgatgtctt
     1261 tctcccgctg ggccggctgc acctcccagg cgccacggat gcaatccagc tcggtctctc
     1321 cccccagcgg ttggtggcca tcggcatgat cgccgtgctg accctgctca acatcagggg
     1381 ggtgaggctc ggcgccgccg tccagacggt gttcagcgtg gccaagatcg gcgcactcgc
     1441 cgcgctcgtt cttctcgggc tcacgctctt ccggcggccc gatgtagcgg cggcgaactt
     1501 cgggcacttc tggggcaccg gagattggag ccttgccgtt ctacccgcgg tcggtgccgc
     1561 gatggtaggg tccttgttcg cgtccgatgc gtggaacaac gtgacctttg ccgccgcaga
     1621 ggtccgggag cctaccaaga atcttccgcg cgcgctggcg ctcggcaccg gtctcgtgag
     1681 cgtgctctat gttctcgcca acgtcgccta cctcaatgtg ctgccgttct acggcgatcc
     1741 caacggtcag gacgtgctgg cgcgcggact gcagtatgcc gcacaggatc gggtcggcac
     1801 ggccgccatc gaggtcgccc taggcgccgg tgctgccact atcatggcgg tagccattct
     1861 gctctcgacc ttcggctgca ataacgggct gatcctctcg ggcccccggg tctactacgc
     1921 catggcccgg gaccggctct tcttcaggaa tgcgggtaaa ctgcatccgc tctaccggac
     1981 gccggtgttc gggctcatcg cccaggcact gtgggcctcg gtactctgta tcagcgggac
     2041 ctacggacag ctactcgatt atgtgatctt tgcggcgctg gtcttctact tcctgaccac
     2101 gctcgcgctc tttcgacttc ggcgaacgcg gcccgagctt ccccggccgg tgagggcgtt
     2161 cggctatcca ctgctccccg cgctctatat ggcggcggtc gccgcgctca tgattgtgct
     2221 gctgatctac cggccgctct acacctggcc ggggctgctc attgtcgcca gcggggtgcc
     2281 ggtatatctc atttggcggc ggagttccca gcggctgtcg gcttgatttc accgcagctg
     2341 gccactagtc ttgtagatgg accgctggaa tccaggcccg ccgatcgccc gctcgaggcg
     2401 ccggtgggcc gtcgtgcatt tgacgcaggc gggagccgcc gcggtccgag ggtgtacatg
     2461 agcgtgatcc gtcccaaggt cggactcacc ttcgacgacg tccttctcgt gccccggcat
     2521 tcggccgtcc atccgcgcga cgtctccacg gccacccgct tcagccgtac catctccctc
     2581 aacatcccgc tcgtctccgc tgccatggat accgtcaccg aggcggacat ggccatcgcc
     2641 atggcacgcg ctgggggaat cggcgtgctc cacaagaaca tgaccgtcga gcgccaggcc
     2701 gccgaggtgg accgggtcaa gcgcagcgag agcgggatga ttctgaaccc gatcaccctc
     2761 ggtcccgacc gcccgctgcg agaggccgcg gcgttgatgc ggcgcttcaa gatctccggt
     2821 gtgccgatcg tagacgggca gggacggctg gtggggatca tcaccaaccg ggaccttcag
     2881 ttcgagcgta atctggagca gccgatccgc gacgccatga ccaaagagaa gctggtcacg
     2941 gcaccgatcg gcaccgatct cgacgaggcc gagcggatcc tggccaagca tcggatcgag
     3001 aagctcccgg tggtggatgc ccaaggcgtg ctcaaggggc tcattacggt caaggacatc
     3061 ttcaagcggc gggagcatcc gctcgccaac aaggaccagc atggccggct gcgggttgcc
     3121 ggcgcggtgg gtggtgggcc tgacgcggtc gtccgcgccc gcgcgttggt gtccgccggt
     3181 gcggatgtca ttgtcgttga ctcggcccat ggccacagcg agggcgtgct cggcactatc
     3241 gatcagctgc gggacgcctt ccccgatatc cagctggtgg ccgggaacat cgccaccgaa
     3301 gcgggggccc gcgagctggt caggcgcggg gtggatgctg tcaaagtcgg gatcgggccg
     3361 ggaagcatct gcaccacgcg ggtagtgacc ggtgtcggtg tcccccaggt tacggccatc
     3421 ctcgattcct tgcgcggcgc cgatgatgtt cccctcatcg ccgacggcgg cgtcaagtat
     3481 tcgggcgacg cggtgaaagc gctggccgct ggggcgtcct ccgtcatgat gggctcgatg
     3541 ctcgccggaa ccgaggaaag cccgggcgaa tcggtgctgg ccgagggccg ccggttcaag
     3601 atgattcgtg ggatgggcag tctctccgcc atgcaggacg gctcggccga tcgctacttc
     3661 caggaaggcg agatggctgc ctccaagatg gttcccgagg gcatcgaagg cagggtcccc
     3721 tacaaagggc ctgtcgccga tgtgctctat cagatggtcg gggggctccg cagcggtatg
     3781 ggctactgtg gggtgggcac gatcccccag ctccagtgcg atgtcgagat gatccagatc
     3841 acctctgccg gcctcagaga gtcgcacccg cacgacgtga cgatcacgcg ggaagctccg
     3901 aactacagcg cgtaagccag atctccgctc caccctgctc gacgcatcat ctacgtgagg
     3961 tgaccgccat atgaacctat gggccaccaa atcggtcgcg gcactccggg cggaggccga
     4021 ggcgacgcat gagcggtcgc tcaagcgcgc cctgactgcc acgaacctga ccatgctcgg
     4081 catcggtgcc atcatcggtg ccggcatttt cgtcttgacc ggcctggctg cggcgcttca
     4141 cgccggcccg gccgtcgtgc tgtcgttcgt ggtcgcggct atcgcctgtg gtcttgccgg
     4201 gctgtgctac gccgagatgg ccagcacggt gccggtggcc ggcagcgcgt acacttattc
     4261 ctacgccacc atgggcgagt tcgccgcctg gatcatcggg tgggatctgg tactcgagta
     4321 cgccatgggc gcggcaaccg tgggtgtcgg ctggtccgga tacttcgtca gcctgctgga
     4381 ctacttcggg cttcatcttc cgaccattgt gacctcggcg ccgctccgct ggtgcaccgc
     4441 ggccgacgtg gccggcgcgg tgatggcctg ctcgcagccg ggctggaatc gcaccggctc
     4501 gctcttcaac cttccggccg ttctcatcgt tctgctcgcc accactattc tcgtggtggg
     4561 catcaaggag tccgccaagg tcaacaacct gatcgtcatc ctgaaggtgg cggtggtgct
     4621 gctcttcatc atcttcgggc tgcagtatgt gaacccggag aactggaagc cgttcattcc
     4681 gcccaatacc ggccatttcg gcgacttcgg gtggagcggg atcttccggg gcgccgggct
     4741 gatcttcttc gcctatatcg gtttcgatgc ggtgagcacg gcggcgcagg aggccaagaa
     4801 cccccagcgg gacatgccca tcggcattct gggctcgttg ggcatctgta ctctgctcta
     4861 cgttctcgtg tcgctcgtcc tgaccggcct ggtgcggtac gaccagctga atgtgggtca
     4921 cccggtggcg ctcgcagtgg agcgggtcag ccaactgtcc tggctgcggc cgttcatcac
     4981 cctgggcgcc gtgctcggtc tgggatcggt cgtcctggtc atgcttctgg gtcagtcccg
     5041 ggtgttctac tcgatgtcgc gtgacggtct catcggcccg tgggccggca aggtccaccc
     5101 gcaattccgc accccgtatc tctcgaccat ctacgtcggc gtggtcgtgg cgttcatcac
     5161 cgggacattc cccatccaga tcctgggcga gctggtgaac atcggaaccc tgctggcctt
     5221 cgtgctggtt tgtgtcgggg tatggattct ccggcggacg cgccccgatc tggaccggcc
     5281 attccggacg ccgctggtgc cattggtccc catcctgggc gtcctcgcct gcctgggcct
     5341 gatggccacg ctgccggccg acacctggct ccgcctcttc gtgtggctcc tgatcggatt
     5401 cgtgatctac ttcagctacg gccggaagca cagcgtgctc cagcgcgagc gtgagcaaca
     5461 ggcactgaag aaatcagctt gaaatctgct tgatgtaggc aggaacgtcc ccacccgacc
     5521 tccacctgcg agggaccgat ggatctgttc cggcgtaaga gcgtcaccgc acttcaggcg
     5581 gaggccgcgt ccgaccagag cctcaagcgc gcgctggggc cgctcaacct cacgttgctc
     5641 ggcgtcggcg ccatcatcgg caccgggatc ttcgtgctca ccggaaccgt cgcggcccag
     5701 aacgcggggc cggctgtcat cctctccttc gtcctcgctg gtatcgcttc catactcgcc
     5761 gccttgtgct acagcgagtt cgcgtcgctg gtacccatgg ccggcagtgc ctatacctac
     5821 gggtacgcca ccctgggcga gttcgtggcc tggatcatcg ggtgggacct cgttctcgag
     5881 tacgcgctga gcgccaccac ggtggcgatc ggctggtccg gctacgtcgt ctcctttctg
     5941 aacgatctcg gcatccacat cccggcgcac tggcaggccg cgcggggaac ggtggtgacg
     6001 ctggccgatg gtaccaccac gaccgcgatc ctcaacttgc cagccgtgtt catcatcgcc
     6061 gtcgttacca cgctgctggt ggtcggcatc aaggaatccg cctcggtcaa caacgtcatc
     6121 gtcttcatca aggtcgccgt ggtgctgttg ttcatcgtga tggcggctcc gcacgtcaac
     6181 ccggacaact ggcatccatt cattcccccc aacaccggct cccgggagca cttcgggttc
     6241 agcggtgtgg tagcgggcgc ggccatcgtc ttcttcgcct acatcggctt cgacgcggtg
     6301 agcaccgcgg cacaggaggc gaagaacccc cagcgggaca tgccgatcgg aatcatcgga
     6361 tcgctcatcg tctgcacggt gctctacatc gtcgtctcgg cgatcgcgac cggtgtggtt
     6421 ccgtatgctc agctcgatgt ccccgctccg atcgccaagg tggccgacca cgtcggtctc
     6481 ggcgtccttt ccagcttgat caagctcggg gcaatcgccg gattgagctc ggtcattctg
     6541 gtccagctcc tgggccaatc ccgggtcttt tacagcatgt cgcgtgatgg cttgctgccg
     6601 cctttcgtcc gccgaattca ccccaggttc cgcacgccct acatcacctc cgtggtcacc
     6661 ggactcgccg tggcaatccc cgcggcgatc cttcccgtcc gggatgcggc caagctggtt
     6721 tcgatcggga ccctgttggc tttcctcatc gtatgtagcg gggttctggt gttgagaatt
     6781 cgcgagccga acctgccacg gccgttcaag actcccttcg tctggttcgt ggcgccggcc
     6841 ggcgcgctct cggccgcgta cctcatgttt tatctggaca tagaaacctg gctgcggctg
     6901 ctcatctggc ttgcgattgg cctggcgatc tatttcctgt acagccggac ccattccagg
     6961 ctggccgtcg gctctaacga atgagggttg cgcgcccgtc cctctccgct gttagtattt
     7021 ggaaatgccg ctttcgttgt cgcctgaaaa ggcagcgctg gcccacgcct ttgcgaccgc
     7081 actccggcca ggtcagcggg tctgcatcac gacccacgta aacccggacg gggatgggct
     7141 cggcagcgag gtcgggctgg tccatctgct ccgcgcccag ggcatcgagg cggtgatcac
     7201 caacccgagc cccacccctc ccaggttcag cttcctgttc gatgacctcc cggcggtcga
     7261 tcgcacgccg gaagcggtca aagagcttcg gcgggcggac ctcatcatcg tgttggacat
     7321 atcggatctg acccggctcg gcatgctgat cgagacggtg aaggatcgcg gcgtgccggt
     7381 ggcgtgcgtg gatcaccacg taagcaccgg tgacttgccc cctgggcccc gctacctcga
     7441 tccagacgcg gcggcaaccg gtgagctgat cttcgagctc gccaagggta acgactggcc
     7501 ggtcacccgg gcggtggctc gcgcactcta cgtcgccatc ctgaccgaca ccggcggatt
     7561 ccgcttcagc aacacccgtc cgcggacact gcgcgtcgcg gcagatctgc tcgagaccgg
     7621 agtggatgcc gagaggatct acctcgaagt gtacgccaag gcgccggagg gacggccgcg
     7681 gttgtttgcg gaggcactgc aaacactggt cgtcgagcac gagtatgggc tggcctgggt
     7741 caccgttccg cctggtgcaa tcgagcggtt gggggtctcc tccgacgatc tcgatggcgt
     7801 ggtcgagttc cctcgctcca tcgaaggcgt gaggatggcg ctgctgttcc gggagatcgc
     7861 ccaaggacgg gtgaaggtgt cccttcgctc agtcggcgat gtggatgtgg cagcctttgc
     7921 caagccgtat ggcgggggcg ggcacaccaa ggcggcgggg ctttcactca ccggctctct
     7981 ggccgaggtc cagtcgaagg tgctgaaagc ggcgagggag tatctgggga cggacggggg
     8041 tcggaatgcg gaagttgacg gtcgaaagtc gcgagtcgcg agtcagggct cgtgaggtgg
     8101 aaacctagag gtcggttttt gcgggactcg tgacttgcga ctcgtgactg gccactacca
     8161 ttatattccg actcagccgg taggaattct tacgctgtag gacagcatgg acatttttga
     8221 ccgaatcgaa cggaccctcg acaccctcag gccttacatc gcttcccacc ggggacacgt
     8281 ggaggtggtg gacttcgacg agcaggaagg ggtgctcctg ctacggcttg ggggcacctg
     8341 tcacggctgc tcggcctcgt cggtgacgct gaagcaggga atcgagagcc ggctgcggga
     8401 gatggtgccg gaagtgaagc acgtggaggc ggtgtaagcc cgcacagcct gccctgagca
     8461 atgcgaaggg gcgatgcggg cttacctggg taacccatgc agacaggcat atgatttgac
     8521 ggaatcgctg gaagcccggg tcaccgctgc gctcgcccgc atccagaacc cccgcctgga
     8581 aaacgacctt ctttctgcgg gaatgatccg ggatctgaca gtcaccgacg aggggcgagt
     8641 ctcgttcact tttctgcttg ccccagaaga cccggcgacg cttgtgcggt cggcccgcgc
     8701 ggcggtggct gcggtcgaag gggtccggaa ggacgagatc aagatcagcg ttaccaaccc
     8761 tgccggcccg acgcgtccta cccacggtcc accacaatcg gcggccgcaa accctccagt
     8821 accacccgcc cagcaaccca tggatcagcc gaatctgggt aagatcatcg cggtctcctc
     8881 cggcaagggt ggggtgggca agagcacggt ggcggctaac atcgctgtcg cgctggcgca
     8941 ggccgggctg cgcgtcgggg tcatggacgc agacgtctac gggcccaaca tcccccgcat
     9001 gttcggcgtg aatgaacgac caccggtgtt cgggggaaag atccagccgc tcgaggcgca
     9061 tggggtcaag ctgatgtcgc tcggctttct ggtcgagcgc gatgcgccgg ccatctggcg
     9121 cggccccatt atcatgaaga tcgtcaacca gttcctgcgg gacgtggact ggggtcaact
     9181 cgactatttc atcgtcgatc tcccgccggg gaccggggat gcccaactct cactggtgca
     9241 ggccactcat gtgtccggtg ctctgatcgt caccactccg caggaagtcg cggtgggcga
     9301 tgcactccgg ggcgccaaga tgttcgagcg ggtgggcgtg ccgatcatcg gcgtggtcga
     9361 gaacatgagc gggttcaccg accctgagac gggccggcgc ttcgacctct tttcgtcggg
     9421 cggcgggcag cgcctggcgg atgagatcgg ggctccgttg ctcggctcgg tgcctctcca
     9481 accccagctc gccgctctcg cggacgacgg ccagcccgtg ttgatcgcgc agcccgagag
     9541 ccccgcagcc agaagtttgc gggacatcgc cgagagcctc caacagaaga ccgtgggccg
     9601 cggagtggca cttccgattt tgcgggggta ggacgggcgg acagatggac gggcggacag
     9661 gcgcagaaac ctaggcattc atctggcgcg gatctccgca ggaacctaag cagtcatggc
     9721 aagcgtgatc caacacgaaa ctacgaagac acgaaatcga tagccggcta gcctttcgtg
     9781 ctttcgtcat ttcgtgcttt tgtgttaagg gggtgggggg gagccgcgaa atgagcttcg
     9841 taaccttact gacagatttc ggaaccgggg actcctacgt cgcggagatg aagggggcca
     9901 tcctcacccg cacacccact gcagtcctag tcgacctcac ccacggcatc catcccggcg
     9961 acatcagatc cgcggcctat gtcctgggcc gcacctggca ccaattcccg cccggcacca
    10021 tccacctggt cgtggttgat cctggagtcg gtacgacccg ggcagcgctc gccttcagcg
    10081 cgcacggata cggtttcgtg gggccggaca acggtgtgtt cacgccggtg ctccacgatg
    10141 cggaggtgga ggtagttgtc ctccccacgc ccgatggggc ctcacccacc ttccacggca
    10201 gggacctgtt cgcgccagcc gcggccgcac tggccggcgg ggcaagcctg agcacgctgg
    10261 gcgagccctt ttcgggcatt cccgagcggt tggcctacac cgagccgcat tacgagggga
    10321 agtcagtcgt aggcgagatc gtttatatcg ac
//
LOCUS       DASYRV010000384        10058 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_364112, whole genome shotgun sequence.
ACCESSION   DASYRV010000384 DASYRV010000000
VERSION     DASYRV010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10058
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_364112"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..185)
                     /locus_tag="VGQ24_10140"
     CDS             complement(<1..185)
                     /locus_tag="VGQ24_10140"
                     /inference="COORDINATES: protein motif:HMM:NF012497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455242.1"
                     /translation="MVRVPGDKSITHRVLLLAALARGMSRITGALTSLDARSTARVLR
                     QLGAGVSPLREGAAALV"
     gene            complement(197..1045)
                     /locus_tag="VGQ24_10145"
     CDS             complement(197..1045)
                     /locus_tag="VGQ24_10145"
                     /inference="COORDINATES: protein motif:HMM:NF014234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HEV8455243.1"
                     /translation="MRPASLAVIGLGAIGGSLAWQARLAGVARVVGYSPDPAEGIQAL
                     KADAVTELADTAPRAVRGAELVVLAVPPRATIDLIATLASGLEQGALLTDVCSVKAPV
                     IERAVTSGLGDRFAGGHPLTGTHESGFASARPDRLRGCVVYICESGTPESHRAAQSVS
                     GFWEHTLEASPVRIDAEAHDRQLAWTSHLPQAVAYALAKTLGDHGLGGVSFGGGAKDT
                     TRIAASSPDMWLDIFLYNRRAVSQALEQTEASIAELRRALGSSDLPALQSFLGAAQAF
                     RRGIDR"
     gene            1175..1552
                     /locus_tag="VGQ24_10150"
     CDS             1175..1552
                     /locus_tag="VGQ24_10150"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8455244.1"
                     /translation="MPKILVIEDSPDNMKLFRTVLTLKGHVVIGLPGGEGLLETIERT
                     TPELVLMDIQLPGQDGFALLREIRQSPFSALRVVALTAHAMTGDRERALAAGFDGYIT
                     KPIDIHNFPTQISRALSGERPEG"
     gene            complement(1527..3671)
                     /gene="glgX"
                     /locus_tag="VGQ24_10155"
     CDS             complement(1527..3671)
                     /gene="glgX"
                     /locus_tag="VGQ24_10155"
                     /inference="COORDINATES: protein motif:HMM:TIGR02100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004133 - glycogen debranching enzyme
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HEV8455245.1"
                     /translation="MTQARRGAAAPLGATWDGEGTNFALYSEHATRVELCLFSHAEDG
                     VAAERIDLLERSDQVWHAYLPDVHPGQAYGYRVHGPSAPNEGHRFNPAKLLLDPYAKA
                     ISGPIEWNDVLSSHPESTLDPDRDLITDMRDSAATLPKCLVIEPGFNWGADRLPRTPW
                     HRTVIYECHVKAMTMLHPEVPEQLRGTYLGLASDPIIEHLVSLGVTAIELLPVHQMFT
                     ERRLAEMGLTNYWGYSSIGYFAPDIRFASASGTPGRQVAEFKTMVQRFHQAGIEVLLD
                     VVYNHTGEGNHLGPTLSFRGLDNAAYYWLNPENRRLYTDFTGCGNTVDLRHPRTLQLV
                     MDSLRYWVKEMHVDGFRFDIAPVLGRDDHGFNPAAKFFELVRQDPLLSQVKLIAEPWD
                     LGPDGYQVGRFPVGWSEWNGKYRDTVRRFWRGDTGQVGDLASRLSGSSDLYGHNGRTP
                     DASVNFVTCHDGFTLHDLVSYETKHNEANGEDNRDGTNQNWSRNWGMEGPAVVTQTVR
                     MRQRIKRNLLATLAFSQGVPMISHGDELGRTQFGNNNAYCHDGPLTWIDWNLEPLERE
                     LLEFTRRLFAIRAANPVLRRRTFFTHQPAGPEHARDLTWLRAEGGEMTAAEWDDPANH
                     LLGMLIRGEASDETDRRGRRLNGDPILLLLNGGGRTKSFRLPEMGRRGVWTEVIDTAP
                     RPTRPVQEDSMSLVPHSLMLLRYETTPPAALR"
     gene            complement(3721..3915)
                     /locus_tag="VGQ24_10160"
     CDS             complement(3721..3915)
                     /locus_tag="VGQ24_10160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455246.1"
                     /translation="MLLLVALVLALDAVFVAIYFMGSVRSASDPTKLVFTAVWTLAIL
                     VIAIRGLSRIRSARLHKPLD"
     gene            complement(4087..4623)
                     /locus_tag="VGQ24_10165"
     CDS             complement(4087..4623)
                     /locus_tag="VGQ24_10165"
                     /inference="COORDINATES: protein motif:HMM:NF016840.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF664 domain-containing protein"
                     /protein_id="HEV8455247.1"
                     /translation="MPTPRTKPPASLVALAAILDRDLATLRREVEAYPDERDLWREIP
                     GVANVGGTLVLHLTGNLQHYFGTRLGSTGYVRDRPAEFARRSVPRSELLREIDAARAA
                     VKAASAMVGAAQLAADFPETVGGSRVKTGDYLVHLAVHFAYHLGQLDYHRRVVTGLNT
                     SVNAVRPAELSSARPAGE"
     gene            complement(4604..5131)
                     /locus_tag="VGQ24_10170"
     CDS             complement(4604..5131)
                     /locus_tag="VGQ24_10170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455248.1"
                     /translation="MSRGTLMARTAVFPMLLLAACSDRSAVQSRPQSRSASPDDSAFA
                     LVQTRGHLAMGVDQYTSAHRFESLADGGRITLVRERDDPAGVTQIRAHMAEIAAAFRR
                     GDFTVPGFVHDRAVPGTATMAARRSRISYSADTLPHGGSLRIHSNDSIAISAIHQFLA
                     FQRQDHRSPHADTTH"
     gene            complement(5128..5616)
                     /locus_tag="VGQ24_10175"
     CDS             complement(5128..5616)
                     /locus_tag="VGQ24_10175"
                     /inference="COORDINATES: protein motif:HMM:NF014373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HEV8455249.1"
                     /translation="MQLTFDPLNPETPTFWLRLGTAILCGGIIGLERQLRGKAAGIRT
                     SILICLGTQLFVGLGASFSGDRVDPTRVLAQVVTGIGFLGGGVILAREGSVVGVTSAA
                     VIWVLAALGSLIGLGHLAAAIVLTLVTVGLLTGVELLESVFRRLRQGATERELERIDL
                     EE"
     gene            complement(5639..5908)
                     /locus_tag="VGQ24_10180"
     CDS             complement(5639..5908)
                     /locus_tag="VGQ24_10180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455250.1"
                     /translation="MSSHKVEQRRLSHRGREFHFVSYDAQIANERRGQPAIPAMWYLM
                     NEGKRRPVLPHVPGQELMELDVALLQWVDEQVFGGSLPVRPQRRR"
     gene            complement(5950..6168)
                     /locus_tag="VGQ24_10185"
     CDS             complement(5950..6168)
                     /locus_tag="VGQ24_10185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455251.1"
                     /translation="MKQLSLEYRGKQITAALGDEPPMWYVTIGGTALTKFPARSDDTE
                     ASVRGRVLAWLEANPDMLDRDQIVLGGG"
     gene            complement(6206..6838)
                     /locus_tag="VGQ24_10190"
     CDS             complement(6206..6838)
                     /locus_tag="VGQ24_10190"
                     /inference="COORDINATES: protein motif:HMM:NF025380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HEV8455252.1"
                     /translation="MAQLRPRRPVTAVAVSFLLFIGALLLIGVAVRHLLPLARRALPG
                     PGQTTVTQGVVVERMRAVAKLVTSETTVRDVVVYQNRRLGSTKRSLVVVTGTIMAGID
                     LDAGTQVDIDHRARQVHIVLPPAKVIGVEVTQLRTYDERSGLWNLFRPADRDTIFQLA
                     RDQLVSAAGELGVTAHAEESARRLLDALIHADGYTVDVAFSGPGAASKGD"
     gene            complement(6847..7023)
                     /locus_tag="VGQ24_10195"
     CDS             complement(6847..7023)
                     /locus_tag="VGQ24_10195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455253.1"
                     /translation="MSKREDARLAALAKKNAEKVVPPKRDRAAQFDSTLRQRSEEEEP
                     ETRRLFKEMKRREF"
     gene            complement(7063..7416)
                     /locus_tag="VGQ24_10200"
     CDS             complement(7063..7416)
                     /locus_tag="VGQ24_10200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455254.1"
                     /translation="MAEPSLIEQVGILNATLVGIEDRLVGGQVPVEALEDFKSALDDM
                     RLRLWGLLSAAGGDDYRGFQERFRIRRATEMCRGLSGDLRVGGVSGRHAELSGLYDAA
                     AELGKGIDHARQHAF"
     gene            complement(7693..8142)
                     /locus_tag="VGQ24_10205"
     CDS             complement(7693..8142)
                     /locus_tag="VGQ24_10205"
                     /inference="COORDINATES: protein motif:HMM:NF021495.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2214 family protein"
                     /protein_id="HEV8455255.1"
                     /translation="MTGRWLAASLHLLALGIGLGAVWARGRTLRSSLDAGTLRQVFYA
                     DTLWGLAAVLWIGTGLWRLIAGLEKGTGYYLQNHVFLAKMALLALVLLLEIRPMITLI
                     RWRVTVSRGEAPDTRAAPLLARISFVQAGLIVLMVFAAAAMARGIGM"
     gene            complement(8139..8585)
                     /locus_tag="VGQ24_10210"
     CDS             complement(8139..8585)
                     /locus_tag="VGQ24_10210"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEV8455256.1"
                     /translation="MDDSPVEVRRGEVVISTDRARIDPDAALALLRTTHWGSGMSRET
                     LTCAIANSVCFGVYHGRELIGLGRVVTDLATYAYWTDVVIAPTHRGRGLGRWLSDCML
                     AHPELQGVRRVALLTRDAADLYARVGFSEGPGSLVYMERKPPGNIT"
     gene            complement(8598..8963)
                     /locus_tag="VGQ24_10215"
     CDS             complement(8598..8963)
                     /locus_tag="VGQ24_10215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455257.1"
                     /translation="MLAILGLLVVPLIRELPLGQTTRTGLLAWVLVGLALYWLYAGMG
                     YRPLLLLQLMLFSGAAALLSTKLLLVAVDVHRLAVLRYAARGLILVGAGCAMANLIAM
                     LLLLWRRSRPRTPAHGGRT"
     gene            9424..>10058
                     /locus_tag="VGQ24_10220"
     CDS             9424..>10058
                     /locus_tag="VGQ24_10220"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HEV8455258.1"
                     /translation="MISSSPQPDRRAGLERIRTVIVNDHDEIGRLVARRIAELIRAKS
                     ATGERVVLGLATGSTPIGVYRELIRMHCDEQLSFAQVVTFNLDEYFPMDPGSIHSYHR
                     FMWENLFSHLDIAAANVHVPRGDAPRDQVEAECRRYEAAIRAAGGIDLQILGIGRTGH
                     IGFNEPGSGAESRTRAVTLDLVTRKDTAADFFGEENVPREAITMGVETIFEA"
BASE COUNT         1817 a         3343 c         3210 g         1688 t
ORIGIN      
        1 tgcaccagag ccgccgcacc ttctcgaagc ggcgaaacgc cggcgccgag ttgccggagc
       61 acccgggcag tggagcgggc atcgagcgag gtgagcgcgc cggtaatccg gctcatgccg
      121 cgcgccaggg ccgccagcag cagcacccgg tgggtgatgc tcttatcgcc cggaacccgg
      181 accatgcccg aaaccctcac cggtcgatgc cccgccgaaa cgcctgggca gctccaagaa
      241 aggattgcag cgccgggaga tcgctgcttc ccaacgctcg ccggagctcg gcgatgctcg
      301 cctcggtctg ctccagcgcc tgactcaccg cccgccggtt gtagaggaaa atgtcgagcc
      361 acatatcggg actactggcc gcgatccggg tggtatcttt cgcgccgccg ccgaacgaca
      421 caccgccgag cccgtgatcg cccagcgtct tggccaaggc gtaggcaacc gcctgcggca
      481 ggtggctggt ccacgcgagc tggcggtcgt gcgcctctgc gtcgatccga accggcgagg
      541 cctccagggt gtgctcccag aatccggaga cgctctgcgc cgcacgatgg ctctccggtg
      601 tgccgctctc gcagatatag accacgcagc cgcggagacg gtcgggacgg gccgaggcga
      661 agccggattc gtgagtgccg gtgagcgggt ggccgcctgc gaaccgatcg cccaaacctg
      721 acgtcaccgc gcgctcgata accggcgcct tgacactgca tacatccgtc agcaaggctc
      781 cctgctcaag cccagaggcc aatgtggcga tcagatcgat ggtggcccgc ggtggcaccg
      841 cgagcaccac gagctcggcg ccgcgcacgg cgcggggagc ggtgtcggcc agctcggtta
      901 ccgcgtccgc cttcagcgcc tggattccct cggccgggtc aggagaatag cccaccaccc
      961 gggccactcc ggccagccgg gcctgccagg cgagcgaccc cccgatcgcc cccagcccga
     1021 ttacggcgag cgaggccggg cgcacgagtc gctgaggcga gagtacttca cggagcccat
     1081 ccccgggcga ggggaggctg gtgccgctgt cgccgttgca ggaggtcgcc gaagattgta
     1141 ctgatatgat acccgattct ccacggactt acgcgtgccc aaaatcctgg tcatcgaaga
     1201 tagtccggat aacatgaagc tgttccggac cgtgctcact ctcaagggtc acgtggtgat
     1261 cggcctgcca gggggtgaag gtttgctgga gaccatcgag cggacgactc ccgagctggt
     1321 gctcatggac atccagctgc cgggtcagga cggcttcgcc ctgctgcggg agatcagaca
     1381 atcgcccttc tccgcgctgc gggtggtcgc gctgacagcg catgccatga ctggcgatcg
     1441 cgagcgggcg ctcgcggcgg ggttcgacgg gtacatcacc aagccgatcg acattcacaa
     1501 cttccccacg cagatctccc gcgcgctcag cggagagcgg ccggaggggt agtctcgtag
     1561 cgcagcagca tgagtgagtg aggcaccagg ctcatgctgt cttcctgcac cggccgggtc
     1621 ggccgaggtg ccgtatcgat cacctcggtc cacacgcccc ggcgtcccat ctcaggcagg
     1681 cggaacgatt ttgtccggcc tcccccgttc aacaggagca ggatcgggtc gccattcagc
     1741 cggcgcccgc ggcggtcggt ttcgtctgac gcctcccctc ggatcagcat ccccaacagg
     1801 tgattggccg gatcgtccca ctcggccgcg gtcatctctc ccccctcggc ccgaagccag
     1861 gtgagatccc gggcgtgctc aggccccgcg ggctggtggg tgaagaacgt gcgccgccgg
     1921 agcaccggat tagcggcacg gatggcgaac agcctccgag tgaactccag cagctcacgt
     1981 tccagcggct cgaggttcca gtcgatccag gtcagtggtc cgtcgtggca gtacgcattg
     2041 ttgttgccga actgggtccg gcccagctcg tccccgtgtg agatcatggg gaccccctgg
     2101 gagaacgcga gggtggccag caggtttcgc ttgattcgtt gccgcatgcg cacggtctgg
     2161 gtgacgaccg cgggtccctc catcccccag ttacggctcc agttctgatt ggttccgtcg
     2221 cgattgtcct cgccgttcgc ctcgttgtgt ttggtctcat agctgacgag atcgtgcaga
     2281 gtgaatccat catggcaggt aacgaagttt acgctggcgt cgggcgtgcg gccgttgtgc
     2341 ccgtacagat cactgctgcc ggacagccgt gaggccagat cgcccacctg ccccgtatcg
     2401 cctcgccaga accggcgaac ggtatcccgg tacttaccgt tccactcgct ccagcccacc
     2461 gggaaccttc ccacctgata cccatcaggt ccaagatccc agggctcggc gatcagcttg
     2521 acctgggaca gcagcggatc ctggcgcacc agctcgaaaa acttcgcggc cggattgaag
     2581 ccgtgatcgt cccgccccag caccggggcg atgtcgaagc ggaacccatc cacgtgcatt
     2641 tccttcaccc agtaccgcag gctgtccatg accagctgga gcgtgcgcgg gtgccgcaga
     2701 tccaccgtgt tgccacagcc ggtgaagtcg gtgtagagcc ggcggttctc cgggttgagc
     2761 cagtagtacg cggcattgtc caagccgcgg aaggagaggg tcggcccgag gtgattgccc
     2821 tcgcccgtgt ggttgtacac cacgtcgagc agcacttcga tcccagcttg gtggaaccgc
     2881 tgcaccatgg tcttgaattc ggctacctgc cgcccgggag taccggatgc agaggcaaac
     2941 cggatatcgg gagcgaaata gccgatggag ctgtaccccc aatagttggt cagccccatc
     3001 tcggcgagcc tgcgttcggt aaacatctgg tgcaccggca gcagctcgat cgccgtcacg
     3061 ccgaggctca ccaggtgctc gatgatcgga tcgctcgcga gtccgagata ggtgcctctg
     3121 agctgttccg gaacctccgg atgcagcata gtcatggctt tcacgtgaca ctcgtagatc
     3181 acggtgcggt gccacggggt tcgcggaagc cggtcggctc cccagttgaa gcccggctcg
     3241 atgaccaggc acttgggcaa ggtggcggcg ctgtcccgca tgtcggtaat cagatcccgg
     3301 tccgggtcta gggtgctctc ggggtggctc gagagaacgt cattccattc tatcgggccg
     3361 ctgatcgcct tcgcataggg atccagcagc agcttggctg gattgaaccg gtgcccctcg
     3421 ttgggagcgc tgggcccgtg aacccggtac ccgtaggcct ggccgggatg aacgtccggc
     3481 agatacgcgt gccagacctg gtcgctacgc tccagcaggt cgatgcgctc ggccgcaacc
     3541 ccatcctcgg cgtggctgaa caggcacagc tctacccggg tcgcgtgttc cgagtagagg
     3601 gcgaaattgg tcccctcgcc atcccacgtg gcaccgagtg gggccgcggc gccgcgccgc
     3661 gcctgtgtca cgcgcgtgcg tcacttggtg atggttgagt cacgggcttc aatggtgggc
     3721 tcagtccagc ggcttatgca ggcgagcact ccgtattctc gacagcccac ggatggcaat
     3781 gaccagaatg gccagagtcc agaccgcggt aaacaccagc ttggttgggt cggatgcgct
     3841 ccgcacgctg cccatgaagt agatggccac gaacacagcg tcgagcgcga gcacgagcgc
     3901 aaccagcagc agcacttctc ttctcaaccc agtagccaca gtatgctccc tccgcaggtg
     3961 gctgccccaa ctcgatcctg ttgccttccg gatccatgat ccgtccgagg cggctgtact
     4021 cagagcgccc ggaggagcag aaggatcatc tcgacacctt gctgtggggg cagcccagag
     4081 aggtcatcac tcgccggccg ggcgcgccga gctcagttcc gccggccgca cggcattcac
     4141 gctggtgttc aggccggtaa cgacccgccg atgatagtcg agctgcccta gatggtacgc
     4201 gaagtggacc gcgaggtgta ccagatagtc acccgtcttg actcgggagc cgccgaccgt
     4261 ctcgggaaag tcggctgcca gctgcgccgc gcccaccatg gcggatgcgg ctttgacggc
     4321 agcgcgcgcg gcatcgattt cccgcagcag ctccgaccga ggcacgctcc ggcgggcgaa
     4381 ctcggcgggc cggtcgcgca cgtagccggt gctcccgagc cgggtgccga aataatgctg
     4441 gagattgccg gtgagatgca ggaccagcgt gccaccgaca ttggcgacgc caggtatctc
     4501 tcgccacaga tcccgctcgt cggggtaggc ttcgacttcg cgccggagag tcgcaaggtc
     4561 ccggtcgagg atggccgcaa gcgccaccag tgatgcgggg ggcttagtgc gtggtgtcgg
     4621 catgaggcga ccgatggtcc tggcgctgaa acgcgaggaa ctggtgaata gccgaaattg
     4681 ctatggagtc attggaatgg attcgaagcg agcccccgtg cggcagggta tccgcgctgt
     4741 agctgatccg agatcggcgc gccgccatgg tcgcggttcc agggaccgcg cgatcatgca
     4801 cgaagccagg gacggtgaag tccccccgcc gaaaggccgc ggcgatctcc gccatgtgag
     4861 cccggatctg ggtgacgccg gctggatcat cccgttcacg caccagggtg atgcgcccgc
     4921 catcagccaa cgactcgaag cgatgcgcgg aggtgtactg gtctactccc atggccaggt
     4981 ggcctcgggt ctgcaccagg gcgaaggcgc tatcgtcggg tgaggcggac cgggactggg
     5041 ggcgggactg gaccgcggaa cggtcgctac acgcggccag cagcagcatc gggaatacgg
     5101 cggtgcgcgc catcagggtg ccgcggctca ttcttcgagg tcgatccgct ccagctcccg
     5161 ctccgtcgcc ccttggcgta gccggcggaa gaccgattcc agaagctcga ccccggtgag
     5221 cagtcccacc gtcaccaggg taaggacgat cgcggcagcc aggtgcccga ggccgatgag
     5281 cgatcccagc gcagccagca cccagatgac ggcggcagag gtgactccga caacggagcc
     5341 ctcacgcgcc aggattactc caccgcccag aaagccgatg ccggtgacga cctgggcgag
     5401 tacccgggtc gggtccacgc gatcgcccga gaatgaggcg cccagcccca cgaacagctg
     5461 cgtgccaaga cagatcagaa tactggtgcg gattcccgcg gccttgcccc gcagttgccg
     5521 ctcgaggcca atgatgcccc cgcagaggat ggccgtcccg aggcggagcc agaatgttgg
     5581 cgtctccggg ttgagcggat cgaaagtgag ctgcatcagg tgtgacgcaa gggctgtctc
     5641 atctccgtcg ctggggtcgc accggaagcg agccgccgaa gacctgctcg tcgacccact
     5701 gcaggagcgc aacatcgagc tccatcaatt cctgcccggg tacatgaggg aggaccggcc
     5761 ggcgcttgcc ttcattcatc aagtaccaca tcgccgggat agcgggctgg ccgcgacgct
     5821 cattggcgat ctgagcgtca taggacacga aatgaaactc acggcctcga tgactgaggc
     5881 gacgctgctc gactttgtgg ctgctcacga agaactcgct ggaatggacg cggtgaaatg
     5941 taacagcgct cagcctcctc cgagtacgat ttgatcccgg tcgagcatgt cggggttggc
     6001 ctccagccag gcgagcaccc gtccccgaac cgaggcctcg gtgtcgtctg accgggccgg
     6061 gaacttggtc agcgcggtgc cgcctatggt gacataccac atcggaggct cgtctcccag
     6121 cgcggcggtg atctgctttc cccgatactc cagactcagc tgtttcatag ggccttcaat
     6181 ttatcgcggc tctgtcgcat cagcatcagt cccctttgct ggcggcccct ggtcctgaaa
     6241 acgcaacgtc cacagtgtag ccgtccgcat gaatcagtgc gtccagcaga cgacgggcgc
     6301 tttcctcggc gtgggcggtc acgcccagct cgccagccgc gctcaccagt tgatcgcggg
     6361 cgagctggaa gatcgtgtcc cggtccgccg gacggaacag attccacaat ccgctacgct
     6421 cgtcataggt tcgcagctgc gtcacttcga cgccgatcac cttggcgggg ggaaggacga
     6481 tatgcacctg gcgggcccgg tggtcgatgt ccacctgcgt gccagcatcg aggtcgatcc
     6541 ccgccatgat cgttcccgtc acgaccacga gtgagcgctt ggtggatccc aggcgccgat
     6601 tctggtatac cacgacgtcg cgcacggtgg tctcgctggt gacgagcttg gcgacggcac
     6661 gcatgcgctc gaccaccaca ccctgcgtga ccgtcgtctg gcccgggccc ggcagcgccc
     6721 tgcgggcgag cggcaaaaga tgccggacgg caacaccgat gagaagaaga gccccgatga
     6781 aaagaaggaa ggaaacggca accgcggtga ccggccgtct aggccgtaat tgcgccatac
     6841 cgtggctcaa aactcccggc gtttcatttc cttgaacagg cgccgcgtct ccggctcctc
     6901 ttcctcggag cgctgccgga gcgtggagtc gaactgcgcg gcacggtcgc gcttgggcgg
     6961 cacgaccttc tccgcgttct tcttggccaa cgctgccagg cgggcgtctt cacgcttcga
     7021 catcatgcct ccaggtgaga attcgacaga aacccgcttc gtttaaaacg cgtgctgccg
     7081 ggcatgatcg atgcccttgc ctaactcggc cgcggcatcg tacaggccgg agagttccgc
     7141 gtgccgcccg ctcacaccac cgacgcggag gtctccactc agccctcgac acatctcggt
     7201 ggcgcgccgg atgcggaacc gctcctgaaa tccccgataa tcatcaccgc ccgccgcgct
     7261 tagaagtccc caaagccgca gccgcatgtc atcgagcgcg ctcttgaaat cctccagggc
     7321 ctcgactggc acctgacccc ctaccagccg gtcttcgatt cccaccagcg tcgcgttgag
     7381 aatgccgact tgctcgatca ggctcggttc cgccatcgac cctccacact gagagtgtcg
     7441 gacctcgacc gcgctaccac tcccaaccgc tggcgaaaga tgctacgggt gcccctcgac
     7501 caacaacatc tcggttgcgg tgcagttccc ctccaaagcc tcgtcccaga tccgcaccca
     7561 ccgcgatgta ggggccgtca tctgccgccc acgcctggga tgtaacctca cagtcaacct
     7621 gagcaagaga gtggtaagtt accaaacagc agcctattat gcagcccagc tgacaagtga
     7681 cgttaagtcg gtctacatgc ctatccccct ggccattgcc gccgcggcga agaccatcag
     7741 cacgatcaac ccggcctgca caaaactgat gcgagccagc agtggcgccg ccctcgtatc
     7801 cggcgcctcg ccccgtgaca ccgtcacgcg ccacctgatc agcgtgatca tcggtcggat
     7861 ctcgaggagc agaaccagag ccagcagggc catcttggcg aggaagacat ggttctgcag
     7921 gtaatagcca gttcccttct ccagtccggc aatcagtcgc cagagccccg tgccgatcca
     7981 gagcacagct gcgagccccc acagcgtatc ggcatagaaa acctgccgga gagtcccggc
     8041 gtccaacgac gatcggagcg ttcggccgcg agcccagact gctcccaacc cgataccgag
     8101 cgcgagaaga tgaagtgatg cagcgagcca tcgacccgtc atgtgatatt tccggggggt
     8161 ttgcgttcca tgtagacgag agaaccagga ccctctgaga acccgactcg ggcgtagaga
     8221 tcggctgcat cccgcgtgag gagcgccacc cggcgcacgc cctgcaactc gggatgggcc
     8281 agcatgcagt cggagagcca acgacccagt ccccgtcccc gatgggttgg ggcgatcacc
     8341 acatcggtcc agtaggcgta ggtggcaaga tcggtgacca cccggcccaa gccgatcagc
     8401 tcgcggccgt ggtacactcc gaagcagacc gagttggcga tagcacaggt cagggtctcg
     8461 cggctcatcc cgctgcccca gtgagttgtt cgaaggaggg ccagcgcggc atcggggtcg
     8521 atgcgggcgc ggtcggtcga gatgacgacc tcaccgcgac ggacttcgac gggtgaatca
     8581 tccatgccct gccccgatca ggtgcgcccg ccgtgcgctg gggtacgggg acgggacctc
     8641 cgccagagaa gcagcagcat ggcaatgagg ttggccatgg cgcaccctgc gccgaccagg
     8701 atcaaacctc gcgcagcgta gcggagcacg gccaggcggt ggacgtccac cgcgaccagc
     8761 agcagcttgg tgctcagcag agcggcggcg ccggagaaga gcatgagctg gagcaggagc
     8821 aacggacggt agcccatccc cgcgtagagc cagtagagcg cgaggcccac gagcacccag
     8881 gccagcaatc cggtccgagt agtctgtccc agcgggagct cgcgaatcag cggcacaacg
     8941 agcagcccga ggatggcgag catcaggagg agcttccagc tcgctctcca cagctcccgt
     9001 ggcgaagcat cttctgcggt aggaagtgac ggttctggtt ccactttgcc tcactcgtcc
     9061 atctggtctg gcgttgactc ggactatgac gctcccgctc ccgctccatt ttacgtgcgt
     9121 tcccccgctt cgggaacgcc caggttgcgc cacgccggct gcagacggcc cgcttcggca
     9181 ggccatggtc gttccaagct cgaagaatga gagggtaagc ggcgatttga gtcgcgccag
     9241 gccaaggccc tcgggctccc tgacagagct ccgtgcggca gacccacatg tctcgggaag
     9301 ctgcgacccg ccggctgccc cggctacccc ttgccctgcc attcgaggcc tcgggcggac
     9361 cctggcccgt ggattgcatg cttggcggct tcgcgacgtc ccccactact tccagtgttg
     9421 cccatgatat caagctcacc tcaacctgac aggcgcgccg gcctcgaacg gatccggacg
     9481 gtcatcgtca atgaccacga cgagatcggc cggctggtgg cgcggcgcat cgccgagctg
     9541 attcgagcga aatctgcaac gggtgagcgc gtcgtcctgg gccttgccac cgggtcgacg
     9601 ccgatcggtg tgtaccgcga gctcatccgg atgcactgcg acgagcagtt gagctttgcc
     9661 caggtggtca ccttcaacct ggacgagtac ttcccgatgg accccggcag tatccactcg
     9721 taccatcgct tcatgtggga gaatctgttt tcccacctgg acatcgcggc ggcgaacgtt
     9781 cacgtccccc ggggtgatgc cccgcgcgat caggtcgagg ccgagtgccg ccggtatgaa
     9841 gcggcgattc gggcggccgg cggcatcgac cttcagattc tgggcatcgg ccggaccggc
     9901 cacatcgggt tcaacgagcc cggttcagga gccgagagcc ggacgcgagc cgtcacgctc
     9961 gatctcgtca cccggaagga cactgccgct gatttcttcg gtgaagagaa tgtgccccgg
    10021 gaagcgatca cgatgggggt ggagacgatc ttcgaggc
//
LOCUS       DASYRV010000385         6887 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1400638, whole genome shotgun sequence.
ACCESSION   DASYRV010000385 DASYRV010000000
VERSION     DASYRV010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6887
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1400638"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            35..1588
                     /locus_tag="VGQ24_10225"
     CDS             35..1588
                     /locus_tag="VGQ24_10225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEV8455259.1"
                     /translation="MATETTSAEFLDRLRVTTAFLEAIIADRGLLAQAPPNDQRRLLQ
                     AAGQVYAPDANARRQLVRASVRRRKAERVRREDQVLDQTGIRTLRRRPVITTPNVFPP
                     PGFEPRDTDGDPDVREAIEPQHCYVCKAKYTGLHHFYDQLCPSCAAFNFAKRTELADL
                     RGRVALLTGGRVKIGYQAGLKLLRAGAHLIVTTRFPRDSADRYAAEPDFGDWGHRLEI
                     FGLDLRHTPSVEAFCREMIETRDRLDFIVNNACQTVRRPPAFYEHMMDREREAFRGMP
                     AQTRRLLGHYEGWRETHPAPAGASAITPAAFERRLPSIAGMADAAELSQVRLLPEEYQ
                     AQSHLFPEGRLDQDLQQVDLREHNSWRMLMADVPSVELLEVQLVNAVAPFVLNARLKP
                     LMLRTPGRDKHIVNVSAVEGQFYRNFKTTRHPHTNMAKAALNMMTRTAAADYQSDGIH
                     MNSVDTGWVTDEDPAELAARKVAEHRFHPPLDIVDGAARIVDPIMTGITSGEHIWGKF
                     LKDYRPTDW"
     gene            1607..2479
                     /locus_tag="VGQ24_10230"
     CDS             1607..2479
                     /locus_tag="VGQ24_10230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455260.1"
                     /translation="MSAESLQKLGLTLLGLGAAGYLALNLYSQPLATYRQIEPIRTFL
                     RRALAHDSVALSTQAGDAQPVRWVLKAMRLDSAAVREWADSRPRVTSTYRGDTLWVTL
                     RRPGSTDRCSPLYPLAAGFLERPEGLRLIHLSSSCPSEVFHAPADCPERLLGSWEYRQ
                     RAGDSYDDEGERLELSCTGGSLQGLYSGLEREGEHGLFYTLVAMADLKIGPEGELSFT
                     VPERELFHTRPKDSQEVGRKKLRSAGLTRDELHMRGRIEAGAIILTCTSSSSSCPDSV
                     MVFRKGTWSSRSRP"
     gene            2455..2922
                     /locus_tag="VGQ24_10235"
     CDS             2455..2922
                     /locus_tag="VGQ24_10235"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEV8455261.1"
                     /translation="MEQPIQTVALIAVRRATAIDAARIAELSGILGYPADSSSLAPRL
                     ERLLARTEDAVFVAEAESGVVGWIHGAEQELLESGRRCEIFGLVVDPGYRSQGVGRRL
                     VTAVEQWAANRGLGQMTVRSNVTRAESHPFYQRLGYIPAKTQHAYRKALLGAG"
     gene            3109..3435
                     /locus_tag="VGQ24_10240"
     CDS             3109..3435
                     /locus_tag="VGQ24_10240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455262.1"
                     /translation="MARLFWLLLIVAFFGTLAIGASWAAAYSRVGTLLGAPPPRMGTQ
                     YTSFRWRELPKLHEHPAVWRFVWTPTAIPGATTVRIDVGPWGHIVSTEPADLVDRLVA
                     FHRTGY"
     gene            3457..4164
                     /locus_tag="VGQ24_10245"
     CDS             3457..4164
                     /locus_tag="VGQ24_10245"
                     /inference="COORDINATES: protein motif:HMM:NF014015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455263.1"
                     /translation="MSTTRVALAWSGGKDSSLALAALRAEPTVEVVALVTTITRDFDR
                     ISMHGVRRTVLEAQVRAIGLPLIQSIIPATASNAAYEAAFATALADLQRRWPDVQHLA
                     FGDLFLSDVRAYREQLLFRLGWTPVFPLWGRDTAILAREFIAAGYRAVLTCVDTTQLD
                     PEFAGRDFDSALLGELPAGVDPCGERGEFHTCASAGPIFREPLVLRTGERLRRDGRFE
                     YCDVMLGSSSIGRGHEG"
     gene            4177..4338
                     /locus_tag="VGQ24_10250"
     CDS             4177..4338
                     /locus_tag="VGQ24_10250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455264.1"
                     /translation="MTKLLGFVGATVGSALGWWAGAPVGTMTAFMLSMLGMGVGLYLG
                     RKLADQYAP"
     gene            complement(4357..6111)
                     /locus_tag="VGQ24_10255"
     CDS             complement(4357..6111)
                     /locus_tag="VGQ24_10255"
                     /inference="COORDINATES: protein motif:HMM:NF025067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4153 domain-containing protein"
                     /protein_id="HEV8455265.1"
                     /translation="MRLPSFVTLAERVREVVVRFPWTMAAGVLAATAAIIGTTRSGGH
                     GGHDEWLRIAAVAALGLALTVALTLFAEERGWSSGRKAGLNAAGVALLVLFYLVWPGP
                     DQKHEAIRYFQLSAGLHLLVATLPLLGLAETSAFWQYNRRLFLGFLRATVFSFVLYIG
                     LVIALVALDKLFGVDVPSELYARLYLVVVFVINTGIFLAAVPHGLKELAGDASYPRVL
                     KVFAQYILTPLVFIYLLMLLAYLVKIVGGGEWPSGWIGWLVTSVAVAGLLGFLLVHPL
                     RDEANEAWIRTYTRWLFIGLIPATAMLLVAFWKRILPYGLTELRLLGVLLGLWLLLIA
                     VSYTIRQDAGIRRIPVTLAALLLLTLYGPLSVTSLAVASQGRRLARLVSRPHEGDHPQ
                     REASAALRFLLDHGARPEITAAVPGELPKVEWDSLPGPRGRRDSVASRILAGTGMRYV
                     SEYSYSPEGYVHLYARKQAALQISGYEWMLNVSARDTAFELEAADSVRVRFDTASGIA
                     RVLADRDSLVFDLSRISSTLAESSDLRGYDVPAERLRLEAAIPGWRGVLMLESIDGKR
                     TGDTVRVGGWRGTLFLGR"
     gene            6290..6451
                     /locus_tag="VGQ24_10260"
     CDS             6290..6451
                     /locus_tag="VGQ24_10260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455266.1"
                     /translation="MPKRNYGFEKRQKELNKQRKQEEKRQRRQERVDAPAENVTIEET
                     TSPRPPLEE"
     gene            6511..6786
                     /locus_tag="VGQ24_10265"
     CDS             6511..6786
                     /locus_tag="VGQ24_10265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455267.1"
                     /translation="MSSHVALIERSNRKDLRQVEVQLTVSEVSAGRQSWGGQFTSRTT
                     DGILPNERLTFTLDNGQRGPARVNETAFDSRRPESTVVHFKGTGPLV"
BASE COUNT         1267 a         2223 c         2282 g         1115 t
ORIGIN      
        1 gtcagctgcg catcacacca gagaaggagc ccgtgtggcg actgagacga ccagcgccga
       61 attcctcgat cgccttcgag tcaccacggc gttcctcgag gcgatcatcg cagatcgcgg
      121 gctgctggcc caggccccgc ctaacgacca gcggcggctg ctgcaggctg ccggccaggt
      181 gtatgccccg gatgccaatg cgcggcgaca gctcgtgcgc gcaagtgttc gtcgtcgcaa
      241 ggccgaacgg gtgcggcgcg aggaccaggt gctcgaccag accgggatcc ggacgctccg
      301 ccggcggccg gtcatcacca cgcccaacgt gtttccgccg cccggcttcg agccccgcga
      361 caccgacggc gatccggacg tcagggaagc tatcgagccg caacactgct acgtgtgcaa
      421 ggcgaagtac accgggctcc atcacttcta cgatcagctc tgcccctcct gcgccgcctt
      481 caacttcgcc aagcgcaccg agctcgccga tctccgtggc cgggtggcgc tgctcaccgg
      541 cggtcgcgtg aagatcggtt accaggcggg tctcaagctg ctgcgggccg gcgcgcacct
      601 catcgtcacc acccgctttc cccgcgattc ggccgaccgc tatgccgccg agccggactt
      661 cggcgactgg ggccaccgtc tcgagatctt cgggctcgac ctgcgccata caccgagcgt
      721 ggaggcgttc tgccgcgaga tgatcgagac tcgcgatcgg ctcgacttca tcgtcaacaa
      781 tgcctgccag acggtgcgcc ggccgccggc gttctacgag cacatgatgg accgcgagcg
      841 tgaggccttc cgcggcatgc ccgcgcagac ccgccggctc ctgggtcatt acgaggggtg
      901 gcgcgagact cacccagccc cggccggtgc gtcggccatc accccggccg cctttgagcg
      961 gcggctcccc agcatcgcgg gcatggcgga cgcggccgag ctgtcccagg tccggctcct
     1021 gccggaggag tatcaggccc aatcccatct cttcccggaa ggccgcctgg atcaggacct
     1081 gcagcaggtg gacctccggg agcacaactc ctggcggatg ctgatggcgg acgtgccctc
     1141 ggtggaactg ttggaggtac agctcgtcaa tgcggtcgct ccgttcgtgc tgaatgcgcg
     1201 gctgaagccg ctcatgctgc gcacgccagg ccgcgacaaa cacatcgtca acgtctccgc
     1261 cgtcgaggga cagttctacc ggaacttcaa gacgacccgg catccgcaca ccaacatggc
     1321 aaaggcagcg ctgaacatga tgacccgcac cgcggccgcg gactaccaga gcgacggcat
     1381 tcacatgaac agcgtggaca ccggttgggt gacggacgaa gatcctgccg agctcgcggc
     1441 gcggaaggtg gcggagcacc gcttccaccc gcctctggac atcgtggacg gcgccgcgcg
     1501 cattgtggac ccgattatga ccgggatcac ctcgggcgag catatatggg gaaagtttct
     1561 gaaggactac cgaccgaccg attggtgatc ggcgccgggg ggatgtatgt ctgctgaatc
     1621 gttgcagaag ctggggctga cgctcctcgg tctcggggca gcagggtatc tcgcgctcaa
     1681 tctgtactct cagccgctcg ccacctatcg tcagatcgag ccgatccgaa cattcctgag
     1741 acgggcgctg gcacacgata gtgttgcgct gtctacgcag gcgggggacg cgcagccggt
     1801 ccgatgggtc ctcaaggcca tgcgcctgga ttctgcggcg gtgcgtgaat gggccgatag
     1861 ccggccgcgt gtgaccagca cctaccgggg cgacaccctg tgggttactc tccgccggcc
     1921 cggcagtacc gaccggtgct ccccgctata tccgctggcc gcagggttcc tggagagacc
     1981 ggaaggcctg cgcctgatcc acctctcgtc ttcctgcccc agcgaggtgt ttcatgctcc
     2041 cgccgattgt cctgagcgcc tcctgggaag ctgggagtat aggcaaaggg ccggggacag
     2101 ttatgacgac gagggtgaaa ggctcgagct gagctgcacc ggcggttctc tgcaaggcct
     2161 ctactctgga ctggagcgag agggtgagca tggcctcttc tacactctgg tagcgatggc
     2221 cgatctgaag atcggcccgg agggcgagct gtcctttacg gtacccgagc gggagctgtt
     2281 ccacacgcgt ccgaaagact cccaggaggt cggacggaag aagctccgat ccgcaggcct
     2341 gactcgcgac gagctgcaca tgcgcggcag gatcgaggct ggagcgatta tcctgacctg
     2401 cacatcgagc tccagttctt gtcccgatag tgtcatggtg tttcgcaaag gcacatggag
     2461 cagccgatcc agaccgtagc gttgatcgcc gttcgcaggg caaccgccat cgacgcggcg
     2521 cggattgccg agttgagcgg gatcctaggc tacccggccg actcctccag cctcgcgccg
     2581 cggctcgagc gtttacttgc ccggacagag gacgcagtgt tcgtggcaga ggctgagtca
     2641 ggcgtcgtgg ggtggattca cggtgcggag caggagctcc tggagtccgg ccggcgctgc
     2701 gaaattttcg ggctcgtggt cgaccctggg taccggagcc agggcgtggg acgcagactg
     2761 gtgacggctg tcgagcagtg ggcggcgaac cgggggctgg ggcagatgac ggtgcggagt
     2821 aacgtgaccc gggccgaatc acacccattc taccagcggc tcggctatat cccggctaag
     2881 actcagcatg cgtatcgcaa ggcgttgttg ggcgcaggct gaaccggcca tccccacagc
     2941 agccgggttg gatgccaacc ctagccggtg ggcggccacc ccacgtagct ttcccgtaag
     3001 ctcccccact gccaggcccg gcactctcgt cacagatgct tcgacgctgc cgcgccgctg
     3061 catgcgatgc acccccccta gcttacgtgt actcaccggt gaggcaacat ggcgcgccta
     3121 ttctggctac ttctgatagt ggcgttcttc gggacgctcg cgattggggc ctcctgggcc
     3181 gccgcgtact cgagggtcgg gacgcttctc ggcgcaccgc ccccccgcat gggaacccag
     3241 tacaccagct tccgctggcg tgaactgccg aagcttcacg agcacccggc ggtgtggcgg
     3301 tttgtctgga ccccgacagc catccccggc gcgaccaccg tacgcattga cgtgggcccg
     3361 tggggccata tcgtctcgac cgagccggcc gacctggtgg atcgattggt ggcctttcac
     3421 cgcaccggct actagtcgcg gtccggcaag ctggccgtga gcacgacgcg ggtggctctt
     3481 gcctggagcg gtggcaagga cagtagcctg gcgctcgcgg cgttgcgcgc agagcctacc
     3541 gtggaagtgg tcgcgctggt caccacgatc acccgcgact tcgatcgaat cagcatgcat
     3601 ggggtccgcc gaaccgtgct cgaggcccag gtccgggcca tcgggctgcc gctcatccag
     3661 tcgatcatcc ccgccactgc gagcaatgcg gcctacgagg cggcattcgc gactgctctt
     3721 gccgacctcc aacggcggtg gccggatgtc caacacctgg ccttcggaga cctcttcctc
     3781 tccgacgtgc gcgcctaccg cgaacagctc ttattccggc tgggctggac accggtcttt
     3841 ccgctctggg gacgtgacac ggcgatactt gcgcgggagt tcatcgccgc cgggtaccgt
     3901 gccgttctga cgtgcgtcga cacgacccag ctcgacccgg agttcgcggg gcgggatttc
     3961 gattcggcgc tgctggggga gcttccggcg ggagtcgatc cctgtggcga gcggggtgag
     4021 tttcacacct gcgcctccgc tggcccgatc tttcgagaac cgcttgtact ccggaccgga
     4081 gagcggctgc gccgcgacgg ccgcttcgag tactgcgacg tgatgctggg ctccagttcg
     4141 attggacgcg gccatgaggg gtagccgggg agcagcatga cgaaactctt gggatttgtc
     4201 ggtgcgaccg tcgggagcgc cctggggtgg tgggccgggg caccggtcgg cacgatgacc
     4261 gccttcatgc tcagcatgct gggaatgggc gtggggctgt atctcggacg caagcttgcc
     4321 gaccaatacg ctccttaggc ccagcaaaga gacgtactag cgtcccagaa acagcgttcc
     4381 acgccagccg cctacccgga ccgtgtcccc agtgcgtttc ccatcgatgg actcgagcat
     4441 caggaccccc cgccatccgg ggatggccgc ctcgagccgg agacgctccg ccggcacgtc
     4501 atacccccgc agatccgagc tctccgcaag cgtgctgctg atccggctga ggtcgaacac
     4561 gagcgagtcg cggtcggcca gcacccgggc gatgcctgat gcggtgtcga accggacccg
     4621 caccgagtct gctgcctcga gttcgaacgc cgtgtcccgc gccgagacgt tgagcatcca
     4681 ctcatatccg ctgatctgga gggcggcctg cttccgggca tagagatgga catacccctc
     4741 cggcgagtac gagtactccg acacatagcg catgccggtc ccagcgagga ttcgactcgc
     4801 caccgaatcg cgccggcccc tggggccggg gagtgaatcc cattcaacct tgggcagctc
     4861 accgggaacg gccgcggtga tctccggccg ggcgccatgg tccagcagaa accgtagcgc
     4921 ggcgctggct tcgcgctggg gatggtcgcc ctcgtggggc cttgatacca gacgtgccag
     4981 gcgccggccc tggctcgcga cggccaggct ggtgacgctc agcggtccat acagcgtcag
     5041 caggagcaat gctgcgaggg tcaccggaat ccgccggatg cccgcgtcct gccggatcgt
     5101 gtagctcacc gcgatgagca gcagccagag gccgagcaga acgccgagaa ggcgaagctc
     5161 ggtaagccca tagggaagaa ttcgcttcca gaatgcgacc aggagcatgg cagtcgctgg
     5221 aatgaggccg atgaagagcc agcgggtgta ggtacggatc caggcttcat tagcctcgtc
     5281 gcgaagggga tgaaccagga ggaagccgag gagaccggcc acggctacac tggtcaccag
     5341 ccagccgatc cagcccgaag gccactcacc cccgcctacg atcttgacga gataggcgag
     5401 cagcatgagg agataaatga agaccagcgg tgtcaggatg tattgcgcga acaccttgag
     5461 aacccttgga taactggcgt cgccggcgag ctccttgagg ccgtggggaa cagcggcgag
     5521 aaagatcccg gtattgatga caaagacgac gaccaggtac aggcgcgcgt acagctcgga
     5581 tggcacgtcg acaccaaaca gcttgtccag cgcgaccagc gcaatgacca gaccgatgta
     5641 cagcacgaac gagaagacgg tggctcgaag aaaccccagg aagagccggc gattgtactg
     5701 ccagaacgcg ctcgtctcgg ccaggccgag gagtggaaga gtcgctacga ggaggtgaag
     5761 gccggcgctg agctggaagt acctgatcgc ctcgtgtttc tggtccgggc cgggccagac
     5821 aagatagaag agcacgagga gagcaacgcc tgcggcattc agcccggctt tccgcccgga
     5881 agaccagcct cgttcctcag caaaaagcgt gagcgcaacc gtgagcgcga ggcccagggc
     5941 ggcaacggcg gcaatgcgga gccactcgtc atggccgcca tggccgccgg agcgggtggt
     6001 gccaatgatg gcagctgtag cagcaagcac gcccgcggcc atggtccagg ggaagcggac
     6061 gaccacctcc ctgacgcgct cagccagggt gacgaacgag ggaagccgca tcgcagctcc
     6121 atgatagggg cagggccggg agcaatctga gggggactgt tacgatgggg aagggccagg
     6181 accgggcggt ggggcgccga ggtgactaag ttacagcata cccgtgaagc ccggacgaac
     6241 actggcgccc ttgaatggct ccgcggtcaa ccttcaagga ggctccctgg tgcccaagcg
     6301 caattacggg ttcgagaaac ggcagaagga actgaacaag cagcggaagc aggaagagaa
     6361 gcgacagcgg agacaggagc gggtggatgc ccctgccgag aatgtgacga tcgaagagac
     6421 cacctccccc cgtccacctc tcgaggagtg atatccagaa ctcaacgccg acaagtagtt
     6481 tcctcgccag cgagaaagaa ggtctccacc atgtcgtctc acgtcgctct tatcgagcgg
     6541 tcgaaccgaa aagatctgag gcaggtcgag gtgcagctga ctgtcagcga ggtgagcgcc
     6601 gggcgacagt cctggggcgg tcagttcacc tcccgcacta cggacgggat tctccccaac
     6661 gagcgactca cgttcaccct cgacaacggg cagagggggc ccgccagggt caacgagacc
     6721 gccttcgaca gccggagacc tgagtcgaca gtggttcact tcaagggaac cggccccctg
     6781 gtttgagtcc acggcacgcc gacgcggcgt gcgtccgagt tcgtcaccat cgtgtggttc
     6841 gactcgctcg agcggtgaga gcctttgctg gcgcggacta cgaagcc
//
LOCUS       DASYRV010000386         7586 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1608673, whole genome shotgun sequence.
ACCESSION   DASYRV010000386 DASYRV010000000
VERSION     DASYRV010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7586
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1608673"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(77..1000)
                     /locus_tag="VGQ24_10270"
     CDS             complement(77..1000)
                     /locus_tag="VGQ24_10270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455268.1"
                     /translation="MSRSLEPLRRALARKGLTPASFIPEASGGRLEEAAIKPARLLEG
                     RRLEAFAVGAAEAWPGPLAYLDGIQRSEVVGYHGSSPVLAGEIAAAVRERHDRRLHTA
                     TQKSRHLILGRPAALAAAGDALLDREPVPLPDDDPPHPVRDLLNASRALDRERGALEL
                     VVGDAYRARSYGWLIVDGSLAESPRWAEDPRLVGISKSHSILPFDGGDLERYLRLPVG
                     YRSSVYAPATRSLAPVRAWGLRLWPWEGKDVLHGLVRVEVAPANEATELVDAISRWIL
                     SERAPISAPDHRWDRLLYGMSSVEQYLKAKA"
     gene            1118..1546
                     /locus_tag="VGQ24_10275"
     CDS             1118..1546
                     /locus_tag="VGQ24_10275"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HEV8455269.1"
                     /translation="MPAKKVAKRQSAESPDTTAQDRLSEVLSTFATLREDGRALIKRI
                     HGSLLEMRDLRQQIREQRAGRTLRRGGFAPARTAYLQMQFGLTARETEVAMLLAQGRS
                     NAVIAKTLGISTHTARHHTQRVLGKLNVHSRAEAGAKLRG"
     gene            1794..3563
                     /locus_tag="VGQ24_10280"
     CDS             1794..3563
                     /locus_tag="VGQ24_10280"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEV8455270.1"
                     /translation="MQAKETAFQLTLRSLEFVRPYRRTLIAVTCLALFLAALSAIDPL
                     VMKYLFDQLGAGTGLSKFSLAIAALVILEITRAGLQAWLGVLSWDVRLGVDYTVRERV
                     MGKLNSLPMSFHQEETIGATMNRINAGINGCVTAFCDTAFNLLPTLLYLVLSVTAMLR
                     MEWHLAIAVIVFAPVPALIGAWAAPEQEQRERRLVERWNSIYGRFNEVLAGMMTVKGF
                     AMEEEEKRRFLAGVREGNVVVRRGVRTDNYTGTLRSLAATAARLAALALGGYVVYRGE
                     MTLGTLVAFLGYIGGLFGPVQGLTNTYQTLRRATVSLEAIFNILDADDVVADTPGAAD
                     LRPLRGEVEFRTVSFGYQAGSSVLKNINLTVRAGETIALIGPSGSGKTTMATLLQRFY
                     RVTEGAITIDGVDIRDMTQHSLRSQIGVVFQDAHLFNDTVRANIAYGRPDASQEEVEM
                     AARAAQAHGFIADLPEGYDTIVRERGSRLSGGERQRIAIARALLKNPPILILDEATSA
                     LDVESEHLIQRALKALLHGRTAFVIAHRLSTVRNADRIVVIKDGEIAEAGNHNELLAQ
                     GGYYASLLNKQTTGFFEESERAA"
     gene            complement(3560..4069)
                     /locus_tag="VGQ24_10285"
     CDS             complement(3560..4069)
                     /locus_tag="VGQ24_10285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455271.1"
                     /translation="MSMDARIEPLSGALPSIGWRWDPETDILSGAFKGNRKSGGMTGT
                     VELTDAEGSVAVLDVNNGVICGLDVVVWPEVITVSNLQVPAKLTDGRVVLPSRPSRPG
                     VASVEVDTTLSVQTNGAESVFHLQIGPKRPVEGVRAADNFYIEVDREGGLAGFWLTNV
                     PAFQGLDDD"
     gene            complement(4077..5288)
                     /locus_tag="VGQ24_10290"
     CDS             complement(4077..5288)
                     /locus_tag="VGQ24_10290"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEV8455272.1"
                     /translation="MPDPLSLNVQHLRASETVAISNEAKRRKAAGEDVLDLGVGEPDF
                     DTPAPAAQAGIQAIQKGMTRYPPNVGIAELRGGIAQQLSTMSGGRRIDPDQIVVSSGS
                     KQSIFNACFALFGPKDRVLIPSPAWVSYPQIVHLTRAEPVLVPGDPEWGLKVSVKDLD
                     RMSHRLTRGLILCSPCNPTGAVYTLAELRAIAEWARKNDIWIISDEIYRRINYGPGPA
                     PSLLDLPDELLERAVIIYGASKAYAMTGWRIGAALAPPHLTKAMAALQSHTTTGANHP
                     AQWAAATAFTDERVDAEVTRMVAAFRRRRDYMVDRFRREVPGIEFVEPHGAFYFFFRV
                     DGIRETDPVTGQSFCEQLMKQEGVALVPGAAFADDRWVRLSYAVSDADLEKGLDRILR
                     LIQRLASARAA"
     gene            5388..6830
                     /locus_tag="VGQ24_10295"
     CDS             5388..6830
                     /locus_tag="VGQ24_10295"
                     /inference="COORDINATES: protein motif:HMM:NF015817.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DbpA RNA binding domain-containing protein"
                     /protein_id="HEV8455273.1"
                     /translation="MPTFEDLHLKTPIAAALERLGWRADDARAREAAPTAARGNNLVA
                     YTPPVPAHAAPGLAGLLSRLLEGGRGLLLAPASQLDAWGARVHDLSRDSGLRVQVAHG
                     TSRAMRRLRTGALDLVIASPETALTLATRSALRMEEVTALFLAWPETWADEDKITPLM
                     QDLPKDAMRIIYTANAERMGSLVERYARKALTIGGPAESLPAVGPVRTVSVPWARRVS
                     ALADLVELLDPASLVIWTADRSRHAAISQVVSAGEPDVRLVTGDAPAAGTIIAFDLPS
                     GERLRQLLGAGEVVLLVPPEAESYAARIAAPRRPLQLPSLVDSVMDAASGQRAAITKA
                     IEQGKPNRALLTLAPLFERHDPAAVAAALFDLWTSSAPAAPAPLPDIPATSKIYVGLG
                     KKDGATANDFVAVLTKELRFERAKIGRIELRDAYSLIEIPAQDAEKLAGALNGVTVRR
                     KRVTARVDRGPTHPPRRENGPSARPVRPRP"
     gene            complement(6848..7138)
                     /locus_tag="VGQ24_10300"
     CDS             complement(6848..7138)
                     /locus_tag="VGQ24_10300"
                     /inference="COORDINATES: protein motif:HMM:NF012442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEV8455274.1"
                     /translation="MNKQELVASVAKRLGVTKAKATEIAELFFASGGIIASELKRGGK
                     VAITGFGSFETRKRAAREWRDPRTGKATNIKASTVPAFRASRALRDLVNRKR"
     gene            7275..>7586
                     /locus_tag="VGQ24_10305"
     CDS             7275..>7586
                     /locus_tag="VGQ24_10305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HEV8455275.1"
                     /translation="MNYGMHPGWIEVISGVMFSGKSEELIRRVRRATIARRKVQVFKS
                     HLDSRYTGLYSVSSHDGTEFEASPVDSAGEIFRLVRPDTEIVAIDEAQFLDSQILNVA
                     TT"
BASE COUNT         1349 a         2505 c         2501 g         1231 t
ORIGIN      
        1 ggctgtcgac ccgagcactc gcgcgtcatc cggagcgaag cgagggatcg cccgctgacc
       61 gctcaccgct caccgcttac gcttttgctt ttaaatactg ttcgacgctg gacatcccgt
      121 agagcagccg gtcccaccga tggtcgggtg cgctgatcgg cgcgcgctcg gacaggatcc
      181 agcgggaaat cgcgtccacg agctcggtgg cctcgttagc cggcgcgacc tcgacccgga
      241 ccaacccatg gagcacgtcc ttcccttccc agggccagag acggagaccc caggcgcgaa
      301 ccggagccag gctcctcgtt gcgggtgcat acaccgagga tcggtagcca accgggagcc
      361 gcaagtagcg ttcgaggtcc ccgccgtcga acggcaggat cgaatgactc ttcgagatac
      421 ccaccaggcg cgggtcctcc gcccagcgtg ggctctccgc gagcgaacca tctacgatga
      481 gccagccgta ggaacgggcc cggtaggcat cgccgactac gagctcgagc gctcctcgct
      541 cgcggtcgag ggctcgcgac gcatttagca ggtcacggac tggatgggga gggtcatcat
      601 ccggcagggg aaccggctca cgatcgagga gcgcgtcacc ggcggcggcg agcgccgcgg
      661 ggcggcccag tataaggtgg cggctcttct gcgtggcggt atgcaggcgg cgatcgtgcc
      721 gctcgcgaac cgcggcggcg atctcgccgg cgaggaccgg ggaggagcca tggtatccca
      781 ctacctcgga ccgctggatg ccatccaggt aggcgagcgg accaggccat gcctccgccg
      841 cgccgacggc gaaggcctcg agccggcgcc cctccaagag gcgggcgggc ttgatggcgg
      901 cctcttcgag cctaccaccg ctcgcctcgg gtataaacga ggctggtgtc agccccttcc
      961 gtgccaaggc tcgacggagg ggctcgaggc tccggctcat agtcctcggc gagggttggg
     1021 ggacgcgtac tgcccgtatt acgatgagac aacctagcgc cgcaggagca ggtgcgcacg
     1081 cggttagcgg ttcgaacgcc agcccgcgag atcagcgatg cccgcaaaga aagtggcgaa
     1141 gcgacagtcg gccgagtcgc ccgataccac ggcccaggat cgactcagcg aggtactgtc
     1201 cacattcgct acgctgcgag aagacggacg ggcactgatc aaacgcattc acggctcact
     1261 gctggagatg cgcgacctgc ggcagcagat acgagagcaa cgagcgggac gaacactcag
     1321 gcgtggtggg ttcgcaccgg cccggaccgc gtatttgcaa atgcagtttg gcctcacagc
     1381 ccgggagacc gaagtggcca tgctgctggc gcaagggcgc tccaatgccg tcatcgcaaa
     1441 gacactcggc atcagcactc acaccgccag acaccacacc cagcgtgtgc tgggcaagct
     1501 caacgtgcac tctcgggcgg aggcaggcgc gaagctgcgc ggctgaggtg gccatttcca
     1561 ctgcaggatg cagggggaca aagcagagct ttctccccgc cgggcggcac gccggcttct
     1621 accagggccc gctcgagcag gtaagtcgct tgtaactcgt tggcgaataa agattcctga
     1681 gccccgcgtg agagtggagt ggaagcgatc gcgggcactt tcgccggccc atctcgaggc
     1741 atcgaacttg cttctcagag gggtatttac ttcatccctc tcgattccct gagatgcaag
     1801 cgaaagaaac cgcattccag ctcaccctac ggtcgctcga gttcgtgcgg ccctaccgcc
     1861 gtacgctgat cgccgtcacc tgcctcgcgc tcttcctggc cgccctgagc gccattgacc
     1921 cgctggtcat gaaatacctg ttcgaccagc tcggcgccgg caccggcctc tccaagttca
     1981 gcctggccat tgcggcactc gtgatcctgg agatcacgcg cgcgggactc caggcttggc
     2041 tcggggtgct gagctgggac gttcgcctcg gagtggacta caccgtgcgc gagcgggtga
     2101 tggggaagct caactcgctc ccgatgtcgt ttcatcagga agagacgatc ggcgccacga
     2161 tgaaccggat caatgcaggg atcaacggct gcgtcaccgc tttctgcgac accgccttca
     2221 acctcctgcc gaccctgctc tatctcgtgc tctccgtcac cgcgatgctc cgcatggagt
     2281 ggcacctggc gattgccgtc atcgtcttcg ctccggttcc ggcgctcatc ggcgcctggg
     2341 ccgcaccgga gcaggagcag cgggaacgac gcctggtcga gcgctggaac tcgatctacg
     2401 ggcgcttcaa cgaggtgctg gccgggatga tgacggtgaa gggcttcgcg atggaagagg
     2461 aggagaagcg ccggttcctg gccggggtgc gggaggggaa tgtcgtagta cgccgaggcg
     2521 tacgcaccga caactacacc ggcacgctcc gaagccttgc cgccacagcc gcccggctcg
     2581 cagccctggc actcggcggc tacgtggtgt accgcggcga gatgacgcta ggaacgctgg
     2641 tggcattcct ggggtacatc ggagggctct tcgggccggt gcaggggctc accaacacct
     2701 accagacgct tcgccgggcc accgtctcgc tcgaggccat cttcaacatc ctggacgccg
     2761 acgacgtggt ggccgacacc ccgggagcgg cggacctcag gccgctccgg ggagaggtgg
     2821 agttccggac cgtgagcttt ggataccagg cggggtcgtc ggtgctgaag aacatcaacc
     2881 tgaccgtccg ggcaggtgag accatcgccc tgatcgggcc cagcgggagc ggcaagacca
     2941 cgatggccac gctgctgcag cgattctacc gggtgaccga aggggcgatc accatcgacg
     3001 gggtggacat ccgggacatg acccagcatt cgctcaggag ccagatcggc gtcgtcttcc
     3061 aggatgctca tctctttaac gacacggtgc gggccaacat cgcatacggc cggccggacg
     3121 cctcccagga agaggtcgag atggcggcgc gggcggccca ggctcacggc tttatcgcgg
     3181 acctgccgga aggctacgac accatcgtgc gcgagcgagg cagccggctc tccgggggcg
     3241 aacggcagcg catcgcgatc gcccgcgccc tgctcaagaa cccgccgatc ctcatcctgg
     3301 acgaggcaac ctcggcgctc gacgtcgagt ccgaacacct gattcagcgc gcgctcaaag
     3361 cgctcctgca cggacgcacg gcgttcgtca ttgcccatcg gctgtcgacg gtgcgcaatg
     3421 ccgaccggat tgtcgtgatc aaggatggag aaattgccga ggcaggcaac cacaacgagc
     3481 tgctcgctca aggtgggtat tacgcgtcat tgctgaacaa acagaccacc gggttcttcg
     3541 aggagtcgga gagggcggct tagtcgtcgt ccagaccctg gaaggccggc acgttagtga
     3601 gccaaaaccc agccagaccc ccttcgcgat ccacttcgat atagaagttg tcggcggcgc
     3661 gtaccccttc gaccgggcgc ttgggaccga tctggaggtg gaacacgctt tcggcgccgt
     3721 tggtctgcac cgaaagggtg gtatccacct caaccgacgc gacaccgggc cgtgaaggcc
     3781 gggagggcag aaccacacgc ccatcagtca gcttggccgg gacctggagg ttggacaccg
     3841 taatcacctc gggccacacc accacgtcga gaccgcagat cacgccgttg tttacgtcca
     3901 gcaccgccac cgacccttcc gcatcggtga gctcgacggt gccggtcatc cctccgcttt
     3961 tccggtttcc cttgaatgcg cccgacagaa tgtcggtctc ggggtcccac cgccagccga
     4021 tcgaaggtag ggctccgctc aacggctcga tcctcgcgtc catgctcatg acgacctcaa
     4081 gccgcacgag cggaggcgag acgttggatc aaacggagaa tccgatccaa gcctttctcc
     4141 aggtcggcgt ctgacacggc ataactcagc cggacccatc ggtcgtcggc gaacgcggcg
     4201 cccggcacca gcgccacgcc ttcctgcttc atgagctgct cgcagaagct ctggccggtc
     4261 accggatcgg tctcccggat cccgtcaacc cggaagaaga agtagaacgc gccatgcggc
     4321 tcgacgaact cgatccccgg cacctccctc cggaagcggt cgaccatata gtcgcggcgg
     4381 cggcggaacg cagcgaccat tcgggtcacc tccgcgtcga cccgctcgtc ggtgaaggcg
     4441 gtggcagcgg cccattgcgc cggatggttg gcgccggtgg tggtgtgtga ctggagcgca
     4501 gccatcgcct tggtcaggtg cggcggggcc agcgccgcgc cgatgcgcca gccggtcatg
     4561 gcgtacgcct tgctcgcccc atagataatc actgcgcgct cgagcagctc gtccggcaag
     4621 tcgagcagcg aaggggcggg accggggccg tagttgatcc gccggtaaat ctcatccgag
     4681 atgatccaga tgtcgttctt gcgcgcccac tcggcgatgg ccctgagctc ggcgagagtg
     4741 tacaccgcac cggtcgggtt gcagggtgag cagaggatga gtccgcgggt gagcctatgg
     4801 ctcatccggt cgagatcctt tacgctcacc ttgaggcccc actcgggatc gccggggacc
     4861 agcaccggct ccgcgcgggt caaatgcacg atctgaggat aggagaccca tgccggagac
     4921 gggatcagaa cccgatcctt gggtccgaag agggcaaagc aggcgttgaa gatcgactgc
     4981 ttcgacccgg agctcaccac gatctggtcg ggatcgatcc ggcggccacc ggacatcgtc
     5041 gagagctgtt gcgcaatgcc cccgcgcagc tcggcaatgc cgacgttcgg aggataccgg
     5101 gtcatgccct tctgaatggc ctgaatgccg gcctgcgccg cgggggccgg ggtatcgaag
     5161 tcaggctcgc cgacgcccag gtcgaggacg tcttccccgg cggccttgcg gcgtttggcc
     5221 tcattgctga tggcgacggt ttcggaagcc ctgagatgct ggacgttcag cgacaaagga
     5281 tcaggcattg cggcaatccg atctgggggt caagtgcggg agaccgggga aaagtttgtc
     5341 cacggccggg ggatgtcaac cggagcaatg gagcttagct tcaccgtgtg cctaccttcg
     5401 aagacctcca cctcaagacg cccatcgccg cggcgctcga acgactcggc tggagggcgg
     5461 acgacgccag ggcccgggaa gcggcgccga cggcggctcg aggaaataat ctcgtcgcct
     5521 atacgccccc cgtgccggct catgctgcac ccgggctggc cgggctcctc agccgcctgc
     5581 tcgagggagg acggggactc ctgctggcac ccgcgagtca gctggacgcg tggggagcgc
     5641 gggtgcacga tctctcccgg gacagcggcc ttcgagtgca agtcgcccat gggacctccc
     5701 gggcgatgcg ccggcttcgc acaggtgcgc tggatctcgt gattgcgagc ccggagaccg
     5761 cgctgaccct ggccacccgg tccgccctcc ggatggagga agtcaccgca ctcttcctgg
     5821 cctggccgga gacctgggcc gacgaagaca agatcacccc gctgatgcaa gacctaccca
     5881 aagacgccat gcggatcatt tacaccgcca acgcggagcg aatggggtct ctggtcgagc
     5941 gctacgcgcg gaaggcgctc actatcggcg gcccggccga gagcctcccc gccgtgggcc
     6001 cggttcgtac cgtgagcgta ccatgggcac ggcgagtgtc ggccctggca gacctggtgg
     6061 agttgctcga cccggcgtcg ctcgtcatct ggaccgcgga ccggagccgg catgcggcga
     6121 tatcacaggt cgtatcggcc ggtgagcccg acgtccgcct ggtaacgggc gatgcgcccg
     6181 ccgccgggac tatcatcgcc ttcgaccttc cgagcgggga acggctccgg cagctgctcg
     6241 gcgcggggga ggtggtgttg ttggttcccc ccgaggcgga gagctatgcc gcccgaatcg
     6301 cggcaccacg gcgtccgctt cagctcccga gtctggtgga ctcggtcatg gacgcggcga
     6361 gcggccagcg agccgctatc accaaggcca tcgagcaggg gaagcccaac cgggcgctgc
     6421 tgacgctggc cccgctgttc gagcgacacg acccggccgc cgtggcagcc gcgctgttcg
     6481 acctctggac cagttcggct ccagccgcgc cggccccgct gccggacatt ccggcgacat
     6541 ccaagatcta tgtcgggctg gggaagaagg acggtgcaac cgcgaatgac tttgtggcgg
     6601 tgctgacgaa ggagctccgg ttcgagcggg cgaagatcgg gcgaatcgag ctgcgggacg
     6661 cctactcgct catcgagatc ccggcccagg atgcggagaa gctggccggc gcgctcaatg
     6721 gcgtcacggt gcggcggaag cgggtgacgg cccgggttga tcgggggccc acccatccac
     6781 cgcggcggga gaatggtccg tccgcaaggc ccgtgcgccc ccgaccttag gccgcacgcc
     6841 aggcgtccta ccgttttcgg tttaccagat cccgcagggc ccggctggcc cggaaggccg
     6901 gcacggtgga cgccttgatg ttcgtggcct tcccggtgcg cgggtcccgc cactcacgcg
     6961 cggcccgctt cctcgtctca aagcttccaa accctgtgat tgcgaccttc ccgccccgct
     7021 tcagctcgga cgcaatgatc ccgcccgatg cgaagaagag ctcagcgatt tcggttgcct
     7081 tggccttggt cacacccagt cgtttggcga cggaggcgac caattcctgt ttgttcacgc
     7141 gggctcctta cgcggcagcg agagccgatc gggcggtcga atatcgtgga gcggatgaat
     7201 cgtccgcaag gtggctggag tttcctgctc gtgcctctac attttgcatc cccacccaac
     7261 cccgcggagt ataaatgaac tacgggatgc accccggatg gatcgaagtg atcagcggcg
     7321 tcatgttcag cggcaagagc gaggagctga ttcgtcgagt ccgtcgcgcc actatagcca
     7381 ggcgcaaggt gcaggtcttc aaatcccatc tcgatagccg ctacaccggc ctctacagcg
     7441 tctccagcca tgacgggacc gaattcgagg ccagcccggt ggattccgcg ggcgagatct
     7501 tccgcctggt gcgccccgac accgagatcg tcgcgatcga cgaggcccag ttcctcgact
     7561 ctcagatcct gaacgtcgcc accact
//
LOCUS       DASYRV010000387         2767 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_705747, whole genome shotgun sequence.
ACCESSION   DASYRV010000387 DASYRV010000000
VERSION     DASYRV010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2767
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_705747"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..391
                     /locus_tag="VGQ24_10310"
     CDS             <1..391
                     /locus_tag="VGQ24_10310"
                     /inference="COORDINATES: protein motif:HMM:NF001810.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEV8455276.1"
                     /translation="ERVNDVRLSRRPMQFSYVDGHFYHFMDQQTFDDIMLTDDLIGAD
                     QLKYLKEGMECEGLVHDDRVITVELPSFVELTVTQTAPGVRGDTATGGTKPAMLETGA
                     TVQVPLFIEEGQVIRVDRREDKYLTRV"
     gene            388..918
                     /gene="accB"
                     /locus_tag="VGQ24_10315"
     CDS             388..918
                     /gene="accB"
                     /locus_tag="VGQ24_10315"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEV8455277.1"
                     /translation="MSPQEMQELAELLQNVPGIRSIDLKDVRRLAQLLREAPEIGSIE
                     VKGWFGTGVVITRTAAAPVVAVPLPAPLPLPAQGAEPEHRDAGSRAIAAAAHLKEIRS
                     PMVGTFYKAPEPGAEPYVKVGNRITPGQTVCIIEAMKIMNEIEAEIAGVVREISVEDG
                     QPVEFGQALFRVDPNG"
     gene            911..2086
                     /locus_tag="VGQ24_10320"
     CDS             911..2086
                     /locus_tag="VGQ24_10320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEV8455278.1"
                     /translation="MADAKAAPQSSFNFKNTIGQMVQRNASDLLLKVGRPPTIRLNGD
                     LQGLEMPPLKPEDLKLLAEQIMTPRQVKEFAERKEADFAIGVPGVGRFRTNIYQQRGT
                     LAFAFRAIPYEVKTVRELHLPVVLEEIALRPRGLVLITGITGSGKSTALASMINHINQ
                     NRRVNVITIEDPIEFLHRDVNSNISQREVGNDTLSFASALRHVLRQDPDVILVGEIRD
                     LETLDTALKASDTGHLVFSTLHTTDAAQTINRLLSFYPPHQHQEVRMILATALQAVVS
                     LRLVPKSDGRGRVPAAEVLINTATVADNIRDIEKALHIPDLIAQGSTSYGMQSFDQSL
                     MKWYKDGAISYESALFYSTNPNEFALRISGVDSASDRKFTEIIDDQAPKSQPMDLTP"
     gene            2160..>2767
                     /locus_tag="VGQ24_10325"
     CDS             2160..>2767
                     /locus_tag="VGQ24_10325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HEV8455279.1"
                     /translation="MFKKVLIANRGEIALRVIRACRELGVETVAVYSEADRESLHVRF
                     ADDDVCIGPPPSRNSYLRIPNIIAAAEITGADAIHPGYGFLAENAEFADTCKASNITF
                     IGPTGDQIRRMGDKATARQLAVEAGVPTIPGSPGVMDDVDAALAFANEIGFPVIIKAT
                     AGGGGKGMRIATDADHFPQLFGLAQNEALAAFGNGAVYVEKYL"
BASE COUNT          534 a          910 c          855 g          468 t
ORIGIN      
        1 tgagcgggtg aacgacgtgc gtctatctcg ccggcccatg cagttctcct acgtggacgg
       61 gcatttctat cacttcatgg atcagcagac gttcgacgac atcatgctca ctgacgacct
      121 catcggcgcc gaccagctca agtacctcaa ggaaggcatg gagtgcgagg gactggtgca
      181 cgacgaccgg gtgattacgg tggagctgcc gtcgttcgtg gagctgacgg tcacccagac
      241 cgctcccggg gtccggggag acaccgccac cggcggaacc aagccggcaa tgctggaaac
      301 cggagccacc gtgcaggttc cgctcttcat cgaggagggc caggtgattc gggtagaccg
      361 ccgcgaagac aagtatctga cccgcgtatg agcccccaag agatgcagga actggccgag
      421 ctgctgcaga acgtgcccgg catccggtcc atcgacctga aggatgtcag gcggcttgcc
      481 caactgctgc gggaggcgcc ggagatcgga tcgatcgagg tgaagggctg gttcgggacc
      541 ggtgtggtca tcacccggac ggctgccgca cccgtcgtcg ccgtccccct gccggctccg
      601 ttgcccttgc cggcgcaagg tgccgagccg gaacaccggg acgccgggtc ccgggcaatt
      661 gccgctgcgg cccacctgaa ggagatccgc tcacccatgg tcgggacctt ctacaaggcc
      721 cccgagcccg gtgccgagcc gtacgtcaag gtgggcaatc gaatcacgcc gggccaaacg
      781 gtgtgcatca tcgaggccat gaagatcatg aacgagatcg aagcggagat cgcgggagtg
      841 gtgcgggaga tctcggtgga agatggccag cccgtcgaat tcgggcaggc tctcttccgg
      901 gtcgatccca atggctgacg ccaaagccgc tccgcagtcc tctttcaatt tcaagaacac
      961 gatcggccag atggtccagc ggaatgcatc cgacttgctg ctcaaggtcg gccggccgcc
     1021 caccatccgt ctcaacggtg atctccaggg cctggagatg cccccgctca agcccgagga
     1081 tctgaagctg ctcgcggaac agatcatgac gccgcgacaa gtcaaggaat ttgccgaacg
     1141 gaaggaagcg gacttcgcca tcggggttcc gggcgtaggc cgcttccgga ccaacatcta
     1201 ccagcagcgg ggcaccctcg ccttcgcgtt ccgcgccatt ccctacgagg taaagaccgt
     1261 ccgcgagctc catctcccgg tcgtcctgga ggagatcgcc ctgcggcctc gcgggctggt
     1321 cctgatcacc ggcattacgg ggtccggcaa gtcgacggct ctggcatcga tgatcaacca
     1381 catcaaccag aaccgccggg tgaacgtcat tacgatcgag gatccgatcg agttccttca
     1441 ccgggacgtc aactcgaata tctcccagcg cgaggtcggc aacgacacgc tctcctttgc
     1501 atcggcgctg cgccacgtgc tccggcagga cccggacgtc atcctggtcg gcgaaattcg
     1561 agacctggag accctggaca ccgccctcaa ggcatcggac acgggccacc tggtgttctc
     1621 caccctccac acgaccgacg ccgcgcagac catcaaccgc ctcctgtcct tctatccgcc
     1681 gcaccagcat caggaggtgc ggatgatcct tgccaccgcc ttgcaggccg tcgtatcact
     1741 ccggctggtg cccaagtccg atggacgcgg tcgcgtcccc gcggccgagg tgttgatcaa
     1801 taccgcgacc gtcgccgaca acatccggga catcgagaaa gcgctccaca tccccgacct
     1861 gatcgcgcaa ggaagcacct cgtacggtat gcaatcgttc gaccagtcgc tgatgaagtg
     1921 gtacaaggac ggggcgatct cctacgagag cgccttgttc tactccacca atcccaacga
     1981 gttcgcgctt cggatatcgg gcgtggactc cgcgtccgat cgcaagttca ccgaaatcat
     2041 cgacgaccag gcgccgaagt cgcagcccat ggacctgacg ccgtaaatgc ccgggaagct
     2101 gctgctccgg cacagcgtgc gagggcgtcc ggcagcgagg tctgaggtct cggccaccca
     2161 tgtttaagaa ggtcctgatc gccaatcgcg gtgagatcgc gctgcgggtg attcgcgcct
     2221 gccgcgagct tggagtggag acggtggccg tctacagcga ggccgaccgc gagtccctgc
     2281 atgtacgctt tgccgacgat gatgtctgta tcgggccgcc gcccagccgg aactcctatc
     2341 tcaggatccc caacatcatt gccgccgcgg agatcaccgg cgcggacgcg attcatccgg
     2401 gatacgggtt tctcgccgaa aacgcggagt tcgccgacac ctgcaaggct tccaacatca
     2461 cctttatcgg accgaccggc gaccagatcc ggcggatggg agacaaggcc acggctcggc
     2521 agctggcggt cgaggccgga gtgcccacga ttccaggctc ccccggggtc atggatgatg
     2581 tcgacgccgc gctcgccttt gccaacgaga tcggcttccc ggtgattatc aaggccacgg
     2641 cgggcggggg cggaaagggc atgcgcatcg ccaccgacgc ggatcatttc cctcaactct
     2701 ttggcttggc ccagaacgag gcgctcgccg cgttcggcaa cggcgcggtg tacgtcgaga
     2761 aatatct
//
LOCUS       DASYRV010000388        14933 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2232772, whole genome shotgun sequence.
ACCESSION   DASYRV010000388 DASYRV010000000
VERSION     DASYRV010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 14933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14933
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2232772"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..453
                     /locus_tag="VGQ24_10330"
     CDS             <1..453
                     /locus_tag="VGQ24_10330"
                     /inference="COORDINATES: protein motif:HMM:NF013168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HEV8455280.1"
                     /translation="LHAFADLATMVQVVGPTRIVFSLDLRLGTPVLHPAMQDARGAGP
                     DVLTLADQAAAAGVMTMLLLDLGRIGTGCGVDLGLLETLRRRFPRLRLLAGGGVLTRL
                     DLERMRDAGCDGALIASAIHTGRVTAADLAALGQSAYRPDQSGTSASW"
     gene            complement(426..929)
                     /locus_tag="VGQ24_10335"
     CDS             complement(426..929)
                     /locus_tag="VGQ24_10335"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-pyruvoyl tetrahydropterin synthase family
                     protein"
                     /protein_id="HEV8455281.1"
                     /translation="MQSNFRVQVSKDYLVFASAHFITFKGHQCESLHGHNYRVGVAVE
                     GAVDSECLFVLDFSVLKQITRKLVDRIDHKVLLPTLNPKLAYREDGDRISVDYFGQPT
                     YVFPKRDCALIPIPNSTAEMLAQYLGSQVRQELAAGGYTHLTSLELEVEENYGQSATY
                     HEALVPD"
     gene            complement(941..1789)
                     /locus_tag="VGQ24_10340"
     CDS             complement(941..1789)
                     /locus_tag="VGQ24_10340"
                     /inference="COORDINATES: protein motif:HMM:NF013991.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triphosphoribosyl-dephospho-CoA synthase"
                     /protein_id="HEV8455282.1"
                     /translation="MTTPAEVAAAGQLACLLEVSAPKPGNVSPERHFHDTRYEDFLAS
                     AVAIGPALAGAGENPLGTTIRRAVEATLRWTRSNTNLGIVLLLAPLARAALREGGSLR
                     QRLRTVLAETTVTDAGEVYAAIRRARPGGLGEAKAEDVAGAPTVSLRDAMALAAERDA
                     VAREYVTDFALTFETGVPAILAARSEGLPWSDTVVEAYLAFLDAAPDTHIARKLGAAE
                     AAAISRQAREVRAAGGTRSPKGRQALGVLDAGLRDQRNRRNPGTTADLTCAALFVVIL
                     EGAWDR"
     gene            complement(1786..2646)
                     /locus_tag="VGQ24_10345"
     CDS             complement(1786..2646)
                     /locus_tag="VGQ24_10345"
                     /inference="COORDINATES: protein motif:HMM:TIGR00768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RimK family alpha-L-glutamate ligase"
                     /protein_id="HEV8455283.1"
                     /translation="MAVLAARTGWHTHELERAAAERGHQLTVLPYEGLVARIGPAAGL
                     RSKNTELDSADVVLARIIPSGSLEQIIFRVDALHRLEDRGTRVVNSPRAIERTVDKFW
                     TSTLLEQCGIPTPETVVCDDAEEAFEAYRTLGDVIVKPLFGSMGLGMVRVSDEEMAFR
                     VFRTIEQIRGVFYVQRTVDHDGTDLRAFVLGGRVIAAIERRACGWRTNLARGGTARSV
                     PLSEQLSGLAVRAAAAVGADYAGVDLVTGRDETTYVLEVNGIPGWRGLQEATGLDIAA
                     RLIDHLARAQ"
     gene            complement(2654..3439)
                     /locus_tag="VGQ24_10350"
     CDS             complement(2654..3439)
                     /locus_tag="VGQ24_10350"
                     /inference="COORDINATES: protein motif:HMM:TIGR02118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EthD family reductase"
                     /protein_id="HEV8455284.1"
                     /translation="MPRRSSWLLVPAFALAAACGKGGEKAATPGADTTAAAAPTSTGP
                     MAIVTVLYNPPKDTAAFEKYYRETHVPLVVANQKEIGFTRADLTKFTSTADGKRPTFY
                     RQAELYFNSMDDLKKGMATAGFKKVADDLPKFATGGLLGMVATTTNNGTGSAEAPAAI
                     VTVIYKTPKDTPAFEKYYAETHVPLVVASQGQIGFERAELTKFDSNLDGSKPARYRQA
                     ELYFPSMDALKKGTATPAFKGVADDLPKFATGGFDVLVGGETK"
     gene            complement(3454..4425)
                     /gene="mch"
                     /locus_tag="VGQ24_10355"
     CDS             complement(3454..4425)
                     /gene="mch"
                     /locus_tag="VGQ24_10355"
                     /EC_number="3.5.4.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR03120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018759 - methenyltetrahydromethanopterin
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methenyltetrahydromethanopterin cyclohydrolase"
                     /protein_id="HEV8455285.1"
                     /translation="MDTLVTSLRMNEAASEIADNMADQADILRIKTHRLPSGARVIDA
                     GVEVDGGIEAGLALAEICMGGLGNLACAPVQIGDKSHPGVIVWTDHPAVACMASQYAG
                     WAISVGKFFGMGSGPLRAHARVERELFEKLGYEEHADEVVLVLETRTLPTDEVAAWVA
                     EKAGLQPLQLTFVVAPTASLAGGVQISARIIETGLHKMETLGFDVRRVISAIGTSPLP
                     PVAKNDLRAIGRTNDCILYGGQARYTVRAGDSELEELAKQVPASASRDYGTPFYEIFQ
                     RYEGDFYKIDPLLFSPAEVWLTSTETGRTFHAGRLNPDILEASLYPL"
     gene            complement(4410..5174)
                     /locus_tag="VGQ24_10360"
     CDS             complement(4410..5174)
                     /locus_tag="VGQ24_10360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455286.1"
                     /translation="MSGLVAKLKTKLEQRADLSEVLAEPWTTLSPGDMAGRTVYLERD
                     GRVSLGDLVHIEGQPNGRIEFTGELDLADRLGAGLQGGEVLVKGNVGREAGLAMAGGI
                     LDIDGDAGPRAGAAPLGYKRGMVGGELIVRGSAGAEAGAAMRRGLLVIGRTAGSQTGR
                     GMIAGTVIILGAAGPDTGLWSKRGSVVALGKITPPETYAYACTYQPVHLRMMLGRLRR
                     KYRLPIQRKHFTGLYQRYSGDLAELGKGEILAWTPS"
     gene            complement(5171..6073)
                     /gene="fhcD"
                     /locus_tag="VGQ24_10365"
     CDS             complement(5171..6073)
                     /gene="fhcD"
                     /locus_tag="VGQ24_10365"
                     /EC_number="2.3.1.101"
                     /inference="COORDINATES: protein motif:HMM:NF002554.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran--tetrahydromethanopterin
                     N-formyltransferase"
                     /protein_id="HEV8455287.1"
                     /translation="MKIRGVLIEDTFAEAFTMRVARIVITGRSTRWVRAAALKLTGFA
                     TSVIGCKCEAGIERELAASETPDGRPGVSVLLMTMSKDEMGKRLIERIGQTVLTCPTT
                     ACYDGLPGLPDRVGVGSALRFFGDGFQSSKVVAGERFWRIPVMEGEFLIQEKFGMLKG
                     VGGGNFLILARSADAALAAAEAAADAMASHPGIILPFPGGVVRSGSKVGSRRIKSMIA
                     STNDAYCPTLRAITKSALPEGVNSVLEIVIDGIDSPAIASAMRVGIDAACRDGVIQIS
                     AGNYGGKLGPHHFYLRKIMDGAAP"
     gene            complement(6158..7792)
                     /locus_tag="VGQ24_10370"
     CDS             complement(6158..7792)
                     /locus_tag="VGQ24_10370"
                     /EC_number="1.2.7.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR03121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran dehydrogenase subunit A"
                     /protein_id="HEV8455288.1"
                     /translation="MSSQLRITGGTVHDPANGVDGEVRDVCIEDGRIVQTLPESAPRL
                     DVRGMIVMPGGVDIHSHLASSSCNHARRLLPEEHAVDPTPPPSLHESAGLPRSGTGGT
                     VPTTFTTGYRYAGLGYTTVFDAAVAPMMARHSHAELDDTPCVDGGFFVLMGNDEYLLR
                     QVAAGERERARDYAAWLLGSAGGYAIKIVNPGGIEAWKSGQRNLNGLDDVLAGRGITA
                     RAILETLADAANALKLPHPVHIHCNNLGIPGNAAVTLATMQALAGRRAHFTHLQFHAY
                     GAPGWSSAARPLIEYVNSHAELSIDVGQVMFGPATTVTADGPVEYLLHKSSGRKWVNI
                     DIELETGCGIVPLLYKDKAAVTALQWAIGLELFLLSADPWRVVLSTDHPNGGSFLSYP
                     QLIQLLMDRGARDQRLKQVNPKLLAGSTLADGLSREYTLNEIAIVTRAAPARLLGLPH
                     KGHLGPGADADVTVYARDPDIAAMFATPRYVVKGGALMVEEGQLRRAPAGRRLHVRPG
                     YDAAVLSDLRRHFDAYSTISFENYPVEGIKDEPIVL"
     gene            complement(7789..9063)
                     /locus_tag="VGQ24_10375"
     CDS             complement(7789..9063)
                     /locus_tag="VGQ24_10375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455289.1"
                     /translation="MTGTGRVVEHVTCLGCGCGCDDIAVTLSEGRITEVTPVCPVGRA
                     WFGDGSVPLEIQRSGRPASLDQAVADAAELLLGARGQVLVYIGPDLTSQAQRQAVALA
                     DLLAATVDSTTSATAAEGLLAGQRRGRAGATLGEVRNRADVLLFWGMDPASRYPRFMA
                     RYVDPAGTHVPEGRGGRTLIGVGVGSDPAPRGVDLTLTLDPGEEIAALSLMRASVQGD
                     AREQRSPGLTQAMAIADRLAKARYAVLAHDAEPGDEPRNPLRVEALIALTQALNGPTR
                     AALISLRAGGNRVGAETVLTWQTGYPFSVDYSRGHPHYDPGERGMGRLAADRFRAGLV
                     VGSPALDGSLSGTLGRMSTVAIGPRASQAPFATRVAIDTGVAGIHEAGTAYRMDEVPL
                     QLRPPLDGPRSATEVLRTLTVAVRAGLGQGRS"
     gene            complement(9060..10220)
                     /locus_tag="VGQ24_10380"
     CDS             complement(9060..10220)
                     /locus_tag="VGQ24_10380"
                     /inference="COORDINATES: protein motif:HMM:NF014686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEV8455290.1"
                     /translation="MIETHPRHVLIAGVTTRAIAVSAARAGYRVTAVDAFGDLDLRAV
                     AEVITLGSTPGTRFDPLAAAIAGEHVPAGLVAYTSNLENHPKAVERLARGRRLLGNPP
                     AVLTRVRNPIGLSSLLRSRGFATPATRATPPTSSGGSTWLLKPRRSGGGHRVVLWRHA
                     RSVPRSSYLQERITGIPGSVIFAANGDNAVVLGLSRQLVGDSRFGAQGFRYCGSLIGS
                     RTTPVFPRQGEILETAAALASDLTREFGLVGLNGIDFIARKGVPYPIEVNPRYSASME
                     LLERDHGLSLFEVHLQACRGTLPSVLETHSGIEGKAIVFARRDVILGDTEAWVGRQSF
                     GDVPHPGEPVLCGRPICTVFARGFDQATCLRRLVRQARVVYHRVRPRARRAA"
     gene            complement(10213..11268)
                     /locus_tag="VGQ24_10385"
     CDS             complement(10213..11268)
                     /locus_tag="VGQ24_10385"
                     /inference="COORDINATES: protein motif:HMM:NF018968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1464 family protein"
                     /protein_id="HEV8455291.1"
                     /translation="MTRVVGIDPGTVSVDICGIADGGLYLDRSWPTEEALANPDSLIE
                     LLTESGVPDLIAGPSGYGLPLQRAAGASDADLRLAFLAPPDEIGGLGGLRSFARRLAA
                     SGLPVIYTPGVIHLDTVPDHRKLNRVDMGTADKLCAVVLGIHDHCARRERTPAQASFI
                     LLELGGAFTAGVAVEGGQIVDGIGGTSGPIGWRAAGALDGEVAFLAGTVSKAALFQGG
                     ASSLIERDAAGRSVALRAYVEGAAKAVRQLRCSAPSADEILLSGRKAAEWEIREWLSA
                     ELRDIGVLRLLTGFAATVKQGAQGAALLADGLAGGRERELVDRLRVREARGTVLDHLV
                     FISPAAARRRLGIPLND"
     gene            complement(11271..12143)
                     /locus_tag="VGQ24_10390"
     CDS             complement(11271..12143)
                     /locus_tag="VGQ24_10390"
                     /inference="COORDINATES: protein motif:HMM:NF020738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent
                     methylenetetrahydromethanopterin/methylenetetrahydrofolate
                     dehydrogenase"
                     /protein_id="HEV8455292.1"
                     /translation="MRKLLLQLDSSRLPSVFDQVVAYDAGADIVMSYGGVTEGDVRDL
                     IYGCIFTRGPKDLHNTAVWIGGNNMSAGEQLLAMAQDALSPPLSVSIMLDSNGSNTTA
                     VAAVVKIEQTLGDLEGRKILILAGTGPVGQRAAGLLAKDGAHVTITSRKPEQGEKARQ
                     FISARFNVHVEAVTLNDPSRLPDLLQGIEVLLNSGPAGVQMVPKSAWTGVKTLKIAVD
                     LNAVPPLGIEGIDVNDAGVKKNGVIVFGAFGVGNLKTKLHKVCVVRLFERNDLVLDAE
                     TIADVARELVAKQP"
     gene            complement(12243..12755)
                     /gene="fae"
                     /locus_tag="VGQ24_10395"
     CDS             complement(12243..12755)
                     /gene="fae"
                     /locus_tag="VGQ24_10395"
                     /inference="COORDINATES: protein motif:HMM:TIGR03126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016840 - carbon-nitrogen lyase activity
                     [Evidence IEA];
                     GO_process: GO:0016051 - carbohydrate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formaldehyde-activating enzyme"
                     /protein_id="HEV8455293.1"
                     /translation="MAGEFYIGESLVGEGNEVAHIDLIIGSRSGPVGAAFVNALSTNT
                     DGFNHLLAVVTPNLPAKPDTILFNKVTIKGAKQAVQMFGPAQAAVARAVVDSVATGVI
                     DKSKANDLCILVGVFIHWQAENDKKIFDYNYQATKESIARALQGKPTIDEVLQKYKSA
                     RHPFASGAEG"
     gene            13143..13307
                     /locus_tag="VGQ24_10400"
     CDS             13143..13307
                     /locus_tag="VGQ24_10400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455294.1"
                     /translation="MYGAVPYLMRSFALDRDSAFKIVCDWVDQQLETAPLEPLEPKPP
                     RRKPARRRAA"
     gene            13435..>14933
                     /locus_tag="VGQ24_10405"
     CDS             13435..>14933
                     /locus_tag="VGQ24_10405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455295.1"
                     /translation="MSFSRGDRRAVWLLTLALATAAPPLHAQYFGRNKVQYGKFDWRV
                     LKTEHFDIYFYSGEDAAARQAGRMGERWLTRLSTIFNHELSGRQPLILYASPTEFQQT
                     NVVGGDLGEGTGGVTEALRRRIVLPAGGTLGDLDHVIGHELTHAFQYDITGNGRPGSL
                     GAMPAAAALPLWFIEGMAEYLSLGPVHPATAMWMRGAIQDTAKDTLPTFRQLDDPRYF
                     PYRYGHALLAYVAGHWGDRAIGQLMRSAARRRGMEPAIREVLGMSPDTLVARWHAEVH
                     ATYEPLLGETRPADAFGARVVGARKDTRYNVSPSLSPDGTQMMFLSDRDLFSIDLFLA
                     DAKTGQIKRQITRTAVDPHLQSLEFIESAGSWSPDGRRFVFAAVSSGRPVLDLYDVAR
                     GKIAREIRFPRLGQILNPSWSPDGRSVAFSGLSGGLTDIYVYDLTEDRLRQLTADPYA
                     DLQPAWSPDGRTIAFATDRFSTNLATLHTGPYSVGLLDLASGRLSQVPGA"
BASE COUNT         2533 a         5004 c         4735 g         2661 t
ORIGIN      
        1 ctgcacgcct tcgccgatct cgccaccatg gtccaggtgg ttggtcccac ccgcatcgtg
       61 ttcagtcttg atctgcggct cggcaccccg gtcctgcacc cggcgatgca ggatgccagg
      121 ggtgccggtc ccgacgtgct gaccctggcg gaccaggccg cggccgcggg agtcatgacg
      181 atgctgctcc tggatctcgg ccggattggg actgggtgcg gtgtggacct gggcttgctc
      241 gagacgctgc gccgccggtt tccgcggctg cggctgctgg ctggtggagg ggttctgacc
      301 cggctggatc tcgagcgcat gcgagacgcc ggctgtgacg gcgcgctcat cgcgagcgcc
      361 attcacaccg gccgggtcac cgccgcggac ctggccgcgc tcggccaatc ggcgtaccgg
      421 cccgatcagt cgggaacgag tgcctcgtgg taggtggcgg actggccgta attctcctct
      481 acctcgagct ccaggctggt caggtgggtg tagcccccgg ccgcaagctc ctgacggacc
      541 tgtgatccca gatactgggc cagcatttcg gccgtgctgt tcggaatcgg tatcaaggcg
      601 caatcgcgct tggggaacac gtaggtgggc tggccgaagt agtcgaccga aatacgatcg
      661 ccgtcttccc gataggccag cttcggattg agcgtgggaa ggagcacctt gtggtcgatg
      721 cggtcgacca gtttgcgggt gatctgcttc agcacgctga agtccagcac gaaaaggcat
      781 tccgagtcaa ccgctccctc gacggcgacg ccaacccggt agttatgccc gtgtagcgat
      841 tcgcactggt gccccttgaa cgtgatgaag tgggctgatg cgaagaccag gtagtccttg
      901 ctgacctgga cccggaagtt gctctgcacg gcggttctcc tcagcggtcc catgcccctt
      961 caagtataac gacgaataac gcggcgcagg tgagatcggc cgtagtgccc gggttgcgcc
     1021 ggttccgttg atcgcgcagc ccggcgtcga ggacccccaa agcctgcctg cctttcggtg
     1081 atcgagtgcc ccccgcggcg cggacctcgc gtgcctggcg ggagatcgcc gcagcttcgg
     1141 cggccccgag cttccgggcg atgtgggtgt cgggcgccgc atccaagaag gcgaggtacg
     1201 cctcgaccac cgtgtcgctc cagggcagcc cctcgctccg ggcggcgagg atagcgggta
     1261 cgccagtctc gaacgtgagg gcaaagtccg tcacatactc tcgcgcgacg gcatcccgct
     1321 cggctgccaa ggccatggca tccctcagcg aaaccgtcgg agctccggcc acgtcctcgg
     1381 ccttggcttc acccagcccc cccgggcgag cccgtctgat cgcggcgtac acctcaccag
     1441 catcggtcac cgtcgtctca gcgagcacgg tccggagccg ctgccgcagg ctcccacctt
     1501 cccgcagggc cgcacgggcc agcggcgcca gcaggagcac gatgccaagg ttggtgttcg
     1561 atcgggtcca tcttagcgtc gcttcgaccg cgcgccggat tgtcgtgccg agagggttct
     1621 cgccagcccc ggccagtgcc ggaccgatcg ccaccgcgct ggccagaaaa tcctcgtacc
     1681 gggtgtcgtg gaagtgccgc tcgggcgaga cgttgccggg cttgggcgcg ctcacctcga
     1741 gcaggcacgc gagctgcccc gcggcagcga cctccgccgg agtagtcact gcgctcgagc
     1801 gagatggtca atcagccgtg cggctatatc cagtccggtt gcctcctgaa gtcccctcca
     1861 tccgggtatg ccgttcacct cgagtacgta ggtggtttcg tcccgcccgg tcaccagatc
     1921 caccccggca taatcggccc cgaccgcggc cgcagcgcgc accgccaggc ctgacagctg
     1981 ctcgctgaga gggacgctgc gggcggtgcc tccgcgcgcc aggttggtgc gccatccgca
     2041 ggcgcgtcgt tcgatggcgg cgatcaccct tccccccaag acaaaggccc gtaggtccgt
     2101 cccatcgtga tccaccgtcc gttggacgta gaagacgccg cggatctgct caatggtacg
     2161 gaagacccgg aatgccatct cctcgtcact gacgcgcacc atgcccagcc ccatcgagcc
     2221 gaacaacggc ttcacgatca catcgccgag cgttcggtag gcctcaaagg cctcctcagc
     2281 gtcatcgcac acgacggttt ccggggtggg gatgccgcac tgctccagca gggtggacgt
     2341 ccagaacttg tccactgtgc gctcgatggc ccgcggcgag tttaccaccc gggtcccacg
     2401 gtcctccagc cggtgcaagg catctacccg gaagatgatt tgctccaacg atcccgaggg
     2461 tatgatccga gccagcacga cgtcggcgga atccagctcg gtgtttttgc tgcgcaggcc
     2521 ggcagccggc ccaatccgtg cgactagccc ctcgtagggg agcaccgtca gctggtgtcc
     2581 ccgttcggct gccgccctct ccaactcgtg agtgtgccag ccggtgcgcg cggcaaggac
     2641 ggccatatgc accttacttc gtctccccgc cgaccagaac gtcgaaccca ccggtggcga
     2701 acttgggtag atcgtccgcg actcccttga aggccggagt ggcggtgccc tttttgaggg
     2761 cgtccatcga cgggaaatag agctcggcct ggcgataccg tgccggcttg gatccgtcga
     2821 ggttggaatc gaacttggtg agctccgctc gctcgaatcc gatttgaccc tgactggcca
     2881 cgactagggg gacgtgggtc tccgcgtagt acttctcgaa ggcaggggtg tccttcggtg
     2941 tcttgtagat gacggtcaca atagccgccg gcgcctccgc cgatccggtc ccgttgttcg
     3001 tcgtcgtcgc gaccatccca agcagacccc cggtagcgaa tttcggcaga tcgtctgcca
     3061 ccttcttgaa ccccgcggtg gccattccct tcttcaggtc gtccatcgaa ttgaagtaga
     3121 gctccgcctg gcgatagaac gtcggccttt ttccgtcagc cgtggacgtg aacttggtca
     3181 ggtcggcccg ggtgaacccg atctccttct gattcgcgac gaccagcggg acgtgagtct
     3241 cccgatagta cttctcgaag gccgccgtgt ccttcggagg gttatagagc acggtgacga
     3301 ttgccatcgg cccggttgag gttggggccg cggcggcggt cgtgtccgcc cccggcgtcg
     3361 ccgccttttc cccgccctta ccacaagcgg cggcaagcgc gaacgcaggt accagcaacc
     3421 agctcgagcg acgtggcatg aagagctcct ggcctagaga gggtacagcg aggcttcgag
     3481 gatgtcgggg ttcaatcggc ccgcgtgaaa cgtccggccg gtttcggtgc tggtgagcca
     3541 gacctccgcg ggactgaaga gcagggggtc gatcttgtag aagtccccct cgtatcgctg
     3601 gaagatctcg taaaacggcg tgccgtagtc tcgcgaagcc gaagccggaa cctgctttgc
     3661 caactcctcc aactcgctgt cccccgcgcg cacggtgtag cgcgcctgcc cgccgtagag
     3721 gatgcaatcg ttggtgcgtc cgatggcccg caggtcgttc ttggcaacgg gaggcagcgg
     3781 cgaggtcccg atagcgctga tcacccgccg cacgtcgaag ccgagggtct ccatcttgtg
     3841 tagcccggtc tcgatgatgc gggccgagat ctgaacccct cccgcgaggc tcgcggtggg
     3901 ggccacgaca aacgtgagct ggagcggctg gagcccggcc ttctccgcca cccaggctgc
     3961 cacctcgtcg gtcgggagcg tacgggtctc gagcaccaac accacctcat cggcatgctc
     4021 ctcatacccc agcttctcga acagctcgcg ctccacccgc gcgtgcgccc ggagcggccc
     4081 ggatcccatg ccgaagaact tgcccaccga gatcgcccat ccggcatact gggatgccat
     4141 gcaggccacg gccgggtgat cagtccagac gatcacgccg gggtgcgact tgtccccgat
     4201 ctgaactgga gcacaagcga gattacccag ccctcccatg cagatctccg ccagagccaa
     4261 cccggcttcg atgccgccgt ccacctcaac cccggcatcg atcacccggg ccccgctggg
     4321 aagccggtgg gtcttgatcc gaaggatgtc ggcctgatcc gccatgttgt cggcgatctc
     4381 gctcgcggcc tcgttcatcc ggagtgatgt cacgagggtg tccatgccag gatctctccc
     4441 ttgccgagct cggccagatc accactgtag cgctggtaga ggccggtgaa gtgttttcgc
     4501 tgtatcggca gacgatattt gcggcgaagc cgcccaagca tcatccgcag gtggacgggc
     4561 tggtaggtgc acgcataggc gtacgtctcg ggcggcgtga tcttgcccag ggctactacc
     4621 gatcctcgtt tggaccagag tccggtgtcc ggtcctgctg cgcccaggat gatcacggtc
     4681 ccggcaatca tgccacgccc ggtctgactg ccggccgtcc ggcctatgac aaggagtccc
     4741 cggcgcatgg cggcacccgc ctccgcccct gcagagcccc gcacgatcag ctcgccgccg
     4801 accatcccac gcttgtatcc gagcggggcg gcgcctgccc gggggccggc atcgccatcg
     4861 atatcgagaa tgcccccggc cattgcgagt cccgcctcgc ggccgacatt gcctttgacc
     4921 aggacttcgc cgccctggag gcctgcaccc aggcggtcgg ccaggtccag ctcgccggtg
     4981 aactcgatgc ggccgttggg ctgtccttcg atatggacga gatcaccgag cgacactctg
     5041 ccgtcgcgct cgaggtatac ggtacgtccg gccatgtcgc ccggcgagag cgtcgtccac
     5101 ggctcagcca gcacctccga cagatcggcg cgctgttcca gcttggtctt cagcttggca
     5161 accaggccgc tcacggcgcg gctccatcca tgatcttccg caagtagaaa tgatgagggc
     5221 cgagcttccc gccgtagttg ccggcgctga tctgtatgac gccgtcacgg catgcggcat
     5281 cgatgccgac tcgcatggcg gacgcgatcg ccggcgagtc gattccgtcg atcacgatct
     5341 cgagcactga gttgacacct tcggggagcg cggacttggt aatggcgcgg agcgtgggac
     5401 aatacgcatc gttggtggag gcgatcatcg acttgatacg ccgggaaccc accttgcttc
     5461 cgctcctcac cacaccgccg gggaagggaa ggatgatgcc cgggtgcgag gccatggcat
     5521 cggccgccgc ttccgccgcg gcaagcgccg cgtcggcgct gcgggccaga atcaagaagt
     5581 tgccgccgcc tacgcccttg agcatcccga acttctcctg aatcaggaac tctccctcca
     5641 tgaccggaat tctccaaaac cgctcgccgg ccacgacctt gctgctctgg aagccgtcac
     5701 cgaagaaccg gagcgcggag ccgaccccca cccgatctgg caaccccggc aagccgtcgt
     5761 aacacgcggt ggtagggcag gtgagcacgg tctgcccgat ccgctcgatg agccgcttgc
     5821 ccatctcgtc cttactcatg gtcatgagga gcacgctcac gccgggccgg ccgtctggcg
     5881 tctcgctcgc ggcgagctcc cgctcgatcc ccgcttcgca cttgcacccg atcacggagg
     5941 tggcgaatcc cgtcagcttg agcgcggccg cccggaccca gcgtgtgctg cgtccggtga
     6001 tcacgatgcg ggctacccgc atggtgaacg cttcggcgaa ggtgtcctcg atgaggacgc
     6061 cacggatctt catcgcgcgg cttcggcatt gtcattctga gcgaagcgaa gaatctctcg
     6121 ggtcttggag agatccttca ctgcgttcag gatgacatca cagaacaatc ggctcatcct
     6181 tgattccctc tactgggtag ttctcgaatg agatcgtaga atacgcatcg aaatgccgcc
     6241 ggaggtcgga tagcactgcg gcatcatagc cgggacggac atggagccgg cggcccgccg
     6301 gcgcacgccg aagctgcccc tcttcaacca tgagcgctcc tcctttgacc acgtaccgtg
     6361 gcgtagcgaa catggcggcg atgtcggggt ccctggcgta gaccgtcacg tccgcgtcgg
     6421 ctcccgggcc gagatgaccc ttgtgaggga ggccgagcaa cctggccgga gcggcccggg
     6481 tgacgatcgc gatctcgttg agcgtgtact cccgagacag accatcggcc aacgtcgacc
     6541 ccgcgagcag cttgggattg acctgcttca gcctctgatc ccgggcgccc cgatccatca
     6601 ggagctgtat gagctggggg taggagagga aagagccgcc attgggatga tcggtggaga
     6661 gcacgacccg ccaggggtct gcactgagca gaaagagctc caggccaatg gcccactgca
     6721 aggcggtcac cgctgccttg tccttatata ggaggggaac gatgccgcac ccggtctcca
     6781 gctcgatatc gatgttgacc cactttcgcc cgctgctctt gtggagcagg tattcgaccg
     6841 gtccatcagc ggtgaccgtt gtcgccggtc cgaacatcac ctggcccaca tcgatgctca
     6901 gctcggcgtg gctgttgacg tattcgatga gcggccgggc cgccgagctc catcccggag
     6961 caccataggc atggaactgg aggtgggtga aatgagctcg ccggccggcg agggcctgca
     7021 tggtggccag cgtgaccgcc gcattgcccg ggatccccag attgttgcag tggatgtgga
     7081 ccggatgggg cagcttcagc gcattggctg catcggccag tgtctcgagg atggcccggg
     7141 cggtgatgcc ccggccggcc agcacatcgt ccagaccgtt cagattccgc tgccctgatt
     7201 tccaggcctc gatccctccg gggttcacga tcttgatggc gtagcctcca gccgatccga
     7261 gaagccaggc tgcatagtca cgtgcgcgct cccgttcgcc ggccgccacc tggcgcagca
     7321 ggtactcgtc gttacccatc agcacgaaga aaccgccgtc tacacacggg gtgtcatcca
     7381 gctcggcatg gctgtgccgg gccatcatcg gagcaaccgc cgcatcgaag acggtggtgt
     7441 agcccagccc ggcgtaccgg tagccggtcg tgaaggtcgt ggggacggtg ccgccggttc
     7501 ccgatctggg caacccagca ctttcgtgca ggctgggtgg aggtgtcggg tccaccgcat
     7561 gctcttccgg cagcagacgg cgggcgtgat tgcagctgga gctggccaga tgagagtgga
     7621 tatccacccc tcccggcatc acgatcatgc ctctcacgtc gagtcttggg gcactctcag
     7681 gcagggtctg cacgatgcgc ccgtcttcga tgcagacatc acgaacctcg ccatcgacac
     7741 cattggcggg gtcgtgaacg gtcccgccgg tgatccgcag ctgactactc atgagcggcc
     7801 ctgtcccaga cctgctcgga ccgcgacggt gagggtccgg aggacctcag tggcggagcg
     7861 cggcccgtcg agtggcggac gaagctgaag cggtacctca tccatccggt atgccgtgcc
     7921 cgcctcatga atgccggcta cgccggtgtc gatggccact cgagttgcga acggtgcctg
     7981 gctcgcccgg ggcccgatag cgaccgtgct catccgcccc agcgttccgg acagagatcc
     8041 gtcgagtgcc ggcgagccca caaccagtcc cgcccggaac ctgtccgcgg caaggcgccc
     8101 catcccgcgc tcgccgggat cgtaatgcgg gtgccctcga gagtagtcga ccgagaacgg
     8161 gtaccccgtt tgccaggtca agacggtttc agccccgacg cgattgcccc ccgcccgaag
     8221 gctgatcagc gcggcccgag ttggaccgtt gagggcctga gtcagtgcga tcagggcctc
     8281 gaccctgagg ggattgcggg gctcgtcgcc cggctcggcg tcgtgcgcca acacagcgta
     8341 acgggctttg gcgaggcgat ccgcaatcgc catcgcctgg gtcaacccag gcgatctctg
     8401 ctcccgggca tccccctgca ccgatgcgcg catcagcgac agcgccgcga tctcttcgcc
     8461 tggatcgagc gttaacgtga ggtcgactcc cctcggcgcc gggtccgagc ccacgccgac
     8521 accgatgagc gtccggcctc cgcgtccttc gggcacgtgc gtaccggcag ggtccacata
     8581 tcgggccatg aatcggggat agcgcgacgc cgggtccatg ccccagaaga ggagaacgtc
     8641 ggcacggttc cgtacttccc ccagcgtggc cccggccctt ccgcgccgct gccctgcgag
     8701 cagtccttcg gctgccgtgg ccgatgttgt agagtcgacg gtcgctgcca gcagatccgc
     8761 caacgccacc gcctgccgct gagcctgcga cgtgaggtcg gggccgatgt agaccaacac
     8821 ctgtccccgt gcgccgagga gcagctcagc cgcgtcggcc acggcctggt ccagcgaggc
     8881 cggccggccg gatctctgga tctcaagcgg aaccgaccca tcgccaaacc aggcacggcc
     8941 aaccgggcag acaggggtca cttcggtaat gcgcccttcg ctcagcgtga cggcgatatc
     9001 atcgcagccg cagccgcagc ccaggcaagt cacgtgttcc accaccctgc ccgtgccggt
     9061 catgcggccc gcctggcgcg aggcctgacc cggtggtaca ccactcgtgc ctgccgaacc
     9121 agccggcgca ggcaggtggc ctgatcaaag ccccgggcga acacggtgca gatggggcgg
     9181 ccgcacagaa caggctcccc gggatgaggc acatcgccga acgactgccg gccgacccat
     9241 gcctcggtat cgccgagaat cacatcgcgc ctggcaaaca cgatcgcctt accctcgatc
     9301 cccgagtgcg tctcgagcac ggacggcaac gtcccccggc aggcttgaag gtggacctcg
     9361 aacagcgaga gtccgtggtc tcgctccaac agctccatgg atgccgagta gcgcgggttt
     9421 acctcgatgg gatagggcac gcccttccgc gcgatgaagt cgataccgtt cagtcccacg
     9481 agcccgaact cgcgagtgag gtcgctcgcc agcgccgctg ccgtttcgag tatctctccc
     9541 tggcgaggga ataccggcgt ggtccggctg ccgatgagac ttccgcagta tcggaagccc
     9601 tgggccccga agcgcgaatc accgacgagt tggcgggaaa gtccgagtac cacggcattg
     9661 tcaccattgg cggcgaagat gaccgagcct ggaatgccgg tgattcgctc ctggagatag
     9721 ctgcttctcg gcaccgaacg tgcgtggcgc cacagcacca ctctatggcc cccgccggat
     9781 ctccggggct tcagtagcca tgtcgacccg cccgaactgg tcggcggcgt ggcccgggtt
     9841 gccggggtgg cgaagcctcg acttcgaagc aggctggaga gcccaatcgg attgcggacc
     9901 cgggtgagta ctgctggcgg attgccgagg aggcgccgcc cgcgcgcaag tcgctcgacc
     9961 gccttcggat gattttccag attcgaggta taggccacca ggccggcggg gacgtgttcc
    10021 ccggcgatcg ctgcagcgag gggatcgaac cgggtgcctg gggtcgagcc cagggtgatc
    10081 acctcagcga cagcccgcag atcgagatcc ccgaaagcgt ctaccgccgt caccctgtac
    10141 cccgcgcgcg cggccgacac agcgatggcc cgggtggtca ccccggcaat gagcacgtgc
    10201 cgcggatgcg tctcaatcat tcagcgggat tccaagccgc cgtcgggctg ccgcaggtga
    10261 gatgaagacg agatggtcca gcaccgttcc tctggcctct cggactctga gccggtcgac
    10321 cagttcccgc tcgcgtccgc cggccagacc atccgcgagc agcgcggcgc cctgagcccc
    10381 ctgctttacc gtggcggcaa atcccgtcag gagtctcagg actccaatat cgcgcagctc
    10441 ggccgacagc cactcgcgaa tctcccactc ggctgctttg cgtccggaga gcaggatctc
    10501 gtctgcggag ggtgcggagc accggagctg acggactgcc ttcgcggcgc cttcgacgta
    10561 cgctcgcaag gcgacggatc tgccggcggc atcccgttcg atcagcgagc tcgcccctcc
    10621 ctggaacagt gcggccttgg ataccgtccc tgccaggaag gcaacctctc cgtccaaagc
    10681 tcccgcagcg cgccatccga ttggaccgct ggttcctcca atgccatcca caatctgacc
    10741 gccctcgact gccaccccgg cggtaaaggc ccccccgagc tccaggagaa tgaacgacgc
    10801 ctgggccggc gtccgctccc gccgggcgca gtgatcgtga atcccgagca ccaccgcgca
    10861 cagcttgtcc gcagttccca tatccacgcg gttcagcttg cgatggtcgg ggaccgtatc
    10921 caggtggatt actccgggcg tgtagatcac aggaaggccg gatgccgcaa gccggcgggc
    10981 gaagctccgg agtccgccca atccaccgat ttcgtcggga ggcgcgagga aggcgagacg
    11041 aagatcggca tcgctggccc cggccgcccg ttgaagtgga agcccgtagc ctgagggccc
    11101 tgcgataaga tcagggacgc ccgattcggt gagcagctcg atgaggctgt cgggattcgc
    11161 cagtgcctcc tcggtgggcc agcttcgatc gagatagagc ccgccatcgg cgatcccaca
    11221 gatgtctacg ctgaccgtgc ccgggtcgat accgacgact cgggtcatgg ctacggctgc
    11281 ttcgcgacca gctctcgagc gacgtcggcg atggtctcgg catcgagcac caggtcgttt
    11341 cgctcgaaaa gccggacgac gcacaccttg tgcagcttgg tcttcaaatt ccccactccg
    11401 aacgcgccga acacaatcac tccgttcttc tttacgcccg catcgttgac gtcaatgccc
    11461 tcgatcccga gggggggcac ggcgttcagg tcaaccgcaa ttttaagcgt cttcactccg
    11521 gtccacgcgg attttggtac catctgaacg ccggcagggc cggagttgag caggacctct
    11581 atcccctgga ggaggtcggg cagccgggat gggtcattga gggtgacggc ttccacgtgg
    11641 acgttgaagc gggcgctgat gaactgccgt gccttctccc cctgctccgg cttgcgcgac
    11701 gtgatggtga cgtgcgcgcc gtccttggcc aggagtcccg ccgctcgctg tccgaccggt
    11761 ccggttcccg cgagaatgag aatcttcctt ccttccaagt cgccgagcgt ttgctcgatc
    11821 tttaccaccg cggcgaccgc cgtggtgttg gagccgttcg agtccagcat gatggagacg
    11881 gagagcggcg gggagagcgc gtcctgtgcc atcgcgagaa gctgctcgcc cgcggacatg
    11941 ttgttcccgc cgatccagac ggcggtgttg tgcagatcct tcggaccccg ggtaaaaatg
    12001 cagccgtaaa tgagatcgcg aacatctccc tcggttaccc ctccgtaact catcacgata
    12061 tccgcaccgg catcgtaggc cacgacctgg tcgaacacac tcggcagcct cgagctgtcg
    12121 agctgaagca gaagcttgcg catcggcgga gccatttccc cgtaacgtga tctgtaaaag
    12181 acgaggggcg ccccagcctc gggccgcccc tcgtcaactc tcggaaaagc gggactgtac
    12241 gatcagccct cagcgccgct tgcaaacgga tggcgcgcgc tcttgtactt ctggagtacc
    12301 tcgtcgatcg tgggcttgcc ctgcagtgcc cgggcgatcg actccttggt ggcctgatag
    12361 ttgtagtcga agatcttctt gtcgttctcc gcctgccagt ggatgaacac acccaccagg
    12421 atgcagagat cgttggcctt gctcttgtcg atcacgccgg tggccacact gtccacgacc
    12481 gcgcgtgcca ccgccgcctg tgccggaccg aacatctgga ccgcctgctt ggcgcccttg
    12541 atggtgacct tattgaatag gatggtgtcg ggcttggccg gcaggttcgg ggtgacgacg
    12601 gcaaggagat gattgaagcc atcggtattg gtcgagagcg cattcacgaa ggccgcgccc
    12661 actgggccgc tcctggagcc gatgatcagg tcgatatggg caacttcatt gccttcccca
    12721 accaacgatt caccaatgta gaattccccg gccatagctg cctccatatc cgttttgtta
    12781 aagaaggaga gaatctggcg ccacatggtt agctcgacgt tggcgaaggg tgagctcgga
    12841 caggagcagc gtggaacaca ccgacggcca ggccacgcgg tccccctggg cgggtcgctc
    12901 gacgcgctaa gtgctttgcc cgacgtagag gaccctagta tggaacccgt atgaatgggt
    12961 gtcaagtcga gttgcacgag gcatacagca ggcgttgggg gactcacacg gagcgcggcg
    13021 acgcgaatct tgatcccgac tgaccttcgg tttatattcg ggcacgtatg ccgggtgccg
    13081 cctccgagcg agacaggtgc tttcgcttcc ttcgacgact gaggtccgag ggtcgcagca
    13141 acatgtacgg cgccgtgccg tatctgatgc gctcgttcgc gctcgaccgg gacagcgcat
    13201 tcaagatcgt ctgtgactgg gtcgatcagc agctcgaaac cgctccgctc gagccgctcg
    13261 aacccaagcc acctcgtcga aagccggcgc ggcgtcgtgc cgcctgaccc ctgcgttaca
    13321 gaatcgtcgc cattaccgaa tccccgacgg cggcgatttg gttttttgta gtaatgtgtt
    13381 gtggctcacc gcgacggttg atcgacgaca ggcattgtct cacgaaggca tcctatgtcg
    13441 ttctctcgcg gcgaccgccg cgctgtctgg cttctcacgc tggcgctcgc gactgcggcg
    13501 ccccccctgc atgcgcagta cttcggtcgt aacaaagtcc aatacggaaa gttcgactgg
    13561 cgggtgctca agaccgagca cttcgacatc tacttctatt ccggcgagga cgcggcggcc
    13621 cgccaagcag ggcgcatggg ggagcggtgg ctcacccggc tgtcgacgat cttcaaccac
    13681 gagctctccg gcaggcaacc gctcatcctg tatgccagcc caactgaatt tcagcagacg
    13741 aacgtggtcg gcggtgatct cggagaagga accggtggcg taaccgaagc gctccggagg
    13801 cgcatcgtct tgccggctgg aggcacgctg ggcgatctcg accacgtaat cggccacgag
    13861 ctgacccacg ccttccagta cgacatcacc ggcaacgggc ggccggggag tctcggcgcg
    13921 atgccggctg ccgctgcgct tcccttgtgg ttcatcgagg ggatggcgga atatttgtca
    13981 ttaggcccgg tccatccggc cactgccatg tggatgcgtg gcgccatcca ggacaccgcc
    14041 aaagacaccc ttccgacatt caggcaactg gacgatcctc gctacttccc ttaccgctac
    14101 ggtcacgcgc tgctggcgta cgtggcggga cactggggcg atcgggccat cggccagctg
    14161 atgcgtagcg ccgcgcgccg ccggggaatg gagccggcca tccgggaagt gttgggcatg
    14221 agcccggaca cgctggtcgc gcggtggcac gcagaagtcc atgccacgta tgagccgctg
    14281 ctcggcgaga cccgtcccgc tgacgcattc ggggctcgag tggtcggtgc gcggaaagac
    14341 actcgctata acgtgtcgcc gtcactcagt ccggacggta cccagatgat gttcctatcc
    14401 gatcgagatc tcttttcgat cgatctcttc ctggcggacg cgaagaccgg ccagatcaag
    14461 cggcaaatca ccaggacggc ggtggatccc cacctccaga gtctggaatt catcgaatcg
    14521 gcggggagct ggtctcccga tggacgacgg ttcgtctttg cggccgtcag ctcgggtcgc
    14581 ccggtcctgg acctgtatga tgtcgcgcgc ggaaagattg cccgggagat ccggttcccc
    14641 cggctgggcc agatcctcaa cccgagctgg tcaccggacg gccgctcggt cgcattctcg
    14701 ggactctctg gcggcctgac cgacatctac gtctacgatc tgaccgagga tcggcttcgg
    14761 caactcaccg ctgaccccta cgcagacctg caaccggcgt ggtcaccgga cggacggacc
    14821 atcgcctttg cgaccgaccg gttcagcacc aaccttgcta cgctgcatac cggtccctac
    14881 tcggtgggac tgctggacct cgccagcggg cggttgagcc aggtgccggg tgc
//
LOCUS       DASYRV010000389         8784 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_4096418, whole genome shotgun sequence.
ACCESSION   DASYRV010000389 DASYRV010000000
VERSION     DASYRV010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8784
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4096418"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..339)
                     /locus_tag="VGQ24_10410"
     CDS             complement(<1..339)
                     /locus_tag="VGQ24_10410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEV8455296.1"
                     /translation="MAQQDIRDISVIGGGPTGLFAAFYAGMRGASARIIDALPALGGQ
                     LMALYPEKYIFDVAGFPKVLAKDLVRDMATQALQFGATTHLGEIVTGLRRVEDGGSGY
                     FVLETSDGDYP"
     gene            482..1630
                     /locus_tag="VGQ24_10415"
     CDS             482..1630
                     /locus_tag="VGQ24_10415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455297.1"
                     /translation="MTAMFLLPRAALTLLAVSLTGLLAGCSGAGRFLREVFRERPPAP
                     LDSMSVASDARVDSMGYVVGSFVGEGTSRAVHLLSSDTGFIAALARRYRPALESDGDL
                     WRALARERVVTLAPGGRRRTTGGTPMVDRALVGGPAGHTAVTPTAILLHGSPCGPRSA
                     QAEIIVEDDHRAQEPSLRGPVLGSFTHSQALGTAAGDRGPFRRREPPPEPGTSLVDDL
                     IARTARVMDSTLGSRLQPLSPRAADDPPLEINTLSDIDAADVIPFRPAAGAVRFAVSL
                     RARRISNGRDTVLAATVMAWDSAGAWQQVIFRPTVVSLRRGRLAPYGALRRGLFWRRL
                     QPISDFAFERDNLWMEQVDVRDGSVLWGIIQPRGNVVVAAAQVEGPCR"
     gene            1627..2172
                     /locus_tag="VGQ24_10420"
     CDS             1627..2172
                     /locus_tag="VGQ24_10420"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HEV8455298.1"
                     /translation="MKIYTRTGDGGQTALFGGGRVPKNDARVAAYGEVDELNSVLGVV
                     RSIEPRGFFDPLFETIQRDLFSIGGQLATPDPSRVAKALEKAELSVTRVSEFERIMDE
                     TEEELLPLRSFVLPAGAPKAVALHLARTVCRRAERSVVSLSQSNDVPAQFLVYLNRLS
                     DLLFTLARLANHRAGVSDVTW"
     gene            2248..3345
                     /gene="aroB"
                     /locus_tag="VGQ24_10425"
     CDS             2248..3345
                     /gene="aroB"
                     /locus_tag="VGQ24_10425"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEV8455299.1"
                     /translation="MSTDPVMVTHALGTYPVYVEPGAIGHLGALVLQHLPRRRVAMLV
                     DETVLPLYRSGRLGPAQWSGETLTFPAGEQSKSRDTWARLTDALLERGFGRDSAIIAL
                     GGGVTGDLAGFVAATYMRGLPYVQVPTTLLAMLDASVGGKTGVDTPKGKNLVGSFHPP
                     AAVIADPLTLGTLPERDYRAGLAEAVKHGLIADREYFEWMETHASELTRRDPDTLTRL
                     VRRSVEIKAEVVSDDEREGGRRAILNAGHTVAHALEQVSNYQLPHGEAVALGLVLECE
                     LAEQLGLADPGLHHRVSQLLIRLGLPDRMPPGIDRTALIGSMMGDKKNRGGLIHFALP
                     ATVGRMHRQHGWTTAVPDTAIRRVLALSNAG"
     gene            3610..4503
                     /locus_tag="VGQ24_10430"
     CDS             3610..4503
                     /locus_tag="VGQ24_10430"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD/SigA"
                     /protein_id="HEV8455300.1"
                     /translation="MTHVRTGKARPFARSIPSGAFDQYLLDIQKLPMISDPDEERRLA
                     RRAVAGDETAAERLVTANLRFVISYVKKYQGHGLDLSELVAIGNEGLLKAVKKFDPDH
                     GVKFISYAVWWVRQAVLKALAEQTRSVRIPLNQNSALVRMSRAKGFLAQELGREPTDA
                     EIAIALNDTVENIRSAHRMTSTEVSLDAPVERQDRGASTFGERVAGTGGIEIEEMTDV
                     RLQREFIDRIFERHLTPRERKILSLYYGLEEGSEALTLEKIGALLGVTRERIRQIRER
                     AFEKLRDSPDVRALRGFWGAA"
     gene            4601..5266
                     /locus_tag="VGQ24_10435"
     CDS             4601..5266
                     /locus_tag="VGQ24_10435"
                     /inference="COORDINATES: protein motif:HMM:NF014269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HEV8455301.1"
                     /translation="MPFRLPIFPLSVVLFPGAPLPLHIFEPRYKRMLADCLLGDRRFG
                     ITPVNSNSDLPGPGSVGCVAEVRVNQELPDGRSNVVVVGGPRFVLSRLLEEPHPYLIA
                     MVQTFDDDADSEPAAEDISELRELFGRYFAGLRELNDAIPEEPALPDDASSLSFHIAS
                     GIECDLGVKQRLLAERSISRRIKALILLLPVLTSAVELGLGVHRRAHTNGKGGAIPDA
                     LAQ"
     gene            5263..6684
                     /locus_tag="VGQ24_10440"
     CDS             5263..6684
                     /locus_tag="VGQ24_10440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEV8455302.1"
                     /translation="MNASLLTALNRIVGSRWVRHRRAELVTYAMDGLPTHESLPGVVV
                     IPETPAQVREIVRLLHLLQVSFVARGAGTGLSGGALADPDTVLIALTRLNRILSVDPV
                     QRRAVLQPGVVNARLSEAVLPLGLHYVPDPSSQAACTVGGNVAENAGGPHCLKYGVTT
                     NHIVALEVVLPDGSVTRLGSLQGEPWGPDLVGLFVGSEGMFGIATEITVRLERIPESV
                     RTMLADFSTVRAASEAVSAIIAAGILPAALEMMDRACVAAVEASIYAAGYPTDAAAVL
                     LVELDGQTDAVEAEAATVREILSDRGAREVRSASSPADRARLWQGRKKAFGAMGRIAP
                     DLAVQDAVVPRSALPDIMDQIEKIRLVHDLTISNVFHAGDGNLHPNISFDRRDPAVAA
                     RVRVACREIMAACVAAGGSITGEHGVGNDKLDYMAWIFTAETLGAMQAVRRAFDPSEM
                     ANPGKVVPVHACREWCVVKSLRQ"
     gene            6681..7892
                     /locus_tag="VGQ24_10445"
     CDS             6681..7892
                     /locus_tag="VGQ24_10445"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEV8455303.1"
                     /translation="MSDAIFTRLRALLGTTGVERDGDGVPRATPDTPDSLTLVCRLAH
                     EEGWKIRVEGRGTWLPSDAPADLAVSTRGLEQIVSVSPADLVATVQAGTSLEALRRRL
                     ADYGMWLAIDPPGRPDRSIGSVVATATAGPLRQGFGPVRDHVLGCAVATGDGRLVNAG
                     GRVVKNVAGFDLTKLQVGGFGGFGIIAEIHLRLRSLPRADVTLLARGARDQLTSGARE
                     LIDAQVLPGALELLSPALAAEADWVLAVRFVGTDAAVQADVRRLVSVGELQWQPLPAD
                     RTAAFWSVAARGTLGGPITLRLGVLGDGVDDTIDLLAHDLDEGLVSAGAGLGMIRWTG
                     DATVDRIRSLRRAAAAREIPMTLERAPWSVRRSLGHFGAYREGVGKIVGRLRDTFDPG
                     QCLNVALEGAD"
     gene            7895..>8784
                     /locus_tag="VGQ24_10450"
     CDS             7895..>8784
                     /locus_tag="VGQ24_10450"
                     /inference="COORDINATES: protein motif:HMM:NF014774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEV8455304.1"
                     /translation="MESAPNGYAALDPCVHCGFCLPACPTYLVTGDEGHSPRGRIVLM
                     RALERGEMDANDPGLFEHLDACLGCRGCEPACPSGVGYGRGFEAAREQLFQARGLSPA
                     ARLVLGVFRHRLAWRPLFALARLLRATGLPRLLAGRNRLRFGMGMLAASAEPREKTEK
                     TERTGRTEVLRTELFPSSPTVALFRGCVMGALFNHVHEATRRTLEANGYRVVQMAGQV
                     CCGALHEHAGDRHGATGLAQANVQALAEGTDFVVVNSAGCGALLKDYGHLLGTEAAAR
                     LGAKVRDVSELLAERGPRTGA"
BASE COUNT         1400 a         2881 c         2967 g         1536 t
ORIGIN      
        1 ggggtaatcg ccgtccgatg tctccagcac gaagtagccg ctgccgccgt cctccacccg
       61 gcgcaggccg gtgacgatct cgcccaggtg cgtggtagcg ccgaactgga gcgcctgggt
      121 ggccatgtca cgaaccaggt ctttggcaag caccttgggg aagccggcca cgtcgaagat
      181 gtacttctcg ggatagagcg ccatgagctg gccaccgaga gccgggagcg cgtcaatgat
      241 ccgcgctgac gcgccacgca tgcccgcgta gaaggccgcg aacagacccg tgggtccgcc
      301 accgatgacc gaaatgtctc tgatatcctg ttgggccacc gcggctcctg gcgttagccg
      361 ttagctatta gctgttagct aatgttgttt gctgttggcc tgttgctttg ctcgtagcta
      421 atagctaatg gctagtagct catacccaaa gccctttcgc ttggtagggg aaccggacac
      481 attgaccgcc atgttcctgc tgccccgtgc ggcgttgacg ctattggcgg tctcactcac
      541 ggggctgctg gcgggctgca gcggtgccgg ccggtttctg cgggaagtct ttcgggaacg
      601 ccctccagca ccactcgatt cgatgagcgt ggccagtgac gctcgcgtgg actcgatggg
      661 atatgtggtc gggagcttcg tcggcgaggg caccagccgg gcggtccacc tgctctcgag
      721 cgacaccggg ttcatcgcgg cgctggcccg gcggtaccgg cccgcgctcg agagcgacgg
      781 cgacctctgg cgtgctctcg cgcgggagcg ggtcgtcacc ctcgcaccgg ggggccgtcg
      841 ccgcaccacc gggggaacac ccatggtcga tcgagccctg gtcggggggc cggccggcca
      901 caccgcggtt acgcccaccg ccatcctgct gcacggcagc ccctgcggcc cacgtagcgc
      961 ccaggccgag atcatcgtcg aagacgacca ccgggctcag gagccgtcgc tgcgaggacc
     1021 ggtactgggc tcctttaccc actctcaagc acttggtacc gcggccggcg accgcgggcc
     1081 cttccggcgg cgcgagccgc ctcccgagcc gggcacctcc ctggtggacg acctcatcgc
     1141 ccggaccgcc agggtgatgg actcgacgct cggctcccgt ctccaacctc tgagcccgcg
     1201 ggcagcggac gatcccccgc tggagatcaa caccctttcc gacatcgacg ccgccgacgt
     1261 gattccgttc cgcccagccg cgggcgcggt gcgcttcgcc gtctcgctcc gggcgcggcg
     1321 aatcagcaat ggacgggaca cggtactcgc ggcgaccgtc atggcatggg acagcgcggg
     1381 cgcctggcag caggtgatct ttcggcccac ggtcgtctca ctgcggcggg gacgcctcgc
     1441 tccctatggt gcattgcgcc ggggtctctt ctggcgccgg ctccagccga tcagcgattt
     1501 tgcgttcgag cgagacaacc tgtggatgga gcaggtggat gtccgcgatg gcagcgtatt
     1561 gtgggggatc atccaaccca gaggaaatgt cgtggtggct gcggcacagg tggaaggacc
     1621 ctgccgatga agatctatac ccgcacgggc gatggcggcc agacggcgtt gttcggtggt
     1681 ggccgggtgc caaaaaacga cgctcgagtg gctgcctacg gcgaggtgga cgagttaaac
     1741 tcggtgctgg gcgtggtgcg gtccatcgag cccaggggct ttttcgatcc gctcttcgag
     1801 acgattcagc gggatctatt ctccatcggc ggccagctcg ccacgcccga tccctcgcga
     1861 gtcgccaagg cgctcgagaa ggcagagctg tcggtgacgc gggtgagcga gttcgagcgg
     1921 atcatggacg agacggaaga ggagctgctg ccgctccggt cgttcgtgct cccggcgggt
     1981 gcgcccaaag ccgttgcgct tcacctggct cggaccgtgt gccgccgagc ggaacggagt
     2041 gtcgtcagcc tatcccagag caacgatgtg ccggcccaat tcctggtata cctcaaccgg
     2101 ctttcggacc tcctgttcac gctcgcgcgc ctggcgaatc atcgggccgg cgtgagcgac
     2161 gtgacctggt agtaagcgaa gcgcctcgtg gcaccgacca cactcggagt catcccgagc
     2221 ggagcgagga atctgttgag actcgtcatg tccactgatc ctgtcatggt gactcacgcc
     2281 ctgggcacct acccagtcta cgtggagccg ggggccatcg gccatcttgg tgccctcgtg
     2341 ctccagcatc tgcccaggcg ccgggtcgcc atgctggtgg acgagaccgt cctcccgctc
     2401 taccgctccg gtcgcctggg cccagcgcag tggagcggtg agacgctgac ctttcccgcc
     2461 ggcgaacaat ccaagagtcg cgatacctgg gcccgcctta ccgatgccct gctcgagcgc
     2521 ggctttggcc gcgatagcgc catcattgca ctggggggcg gagtgaccgg agatctcgcc
     2581 gggtttgtcg ccgccaccta catgcgcgga ctgccctatg tgcaggtccc gaccacgttg
     2641 ctcgccatgc tcgacgcgtc ggtcggcggc aagaccggag tggacacccc aaagggcaag
     2701 aacctggtcg gctccttcca ccccccggct gcggtgatcg ccgatccgct taccctcggc
     2761 accctgcccg agcgcgatta ccgggccggt ctggccgagg cggtgaaaca cggcctcatt
     2821 gccgaccgcg aatacttcga gtggatggag acacacgctt ccgagctcac ccggcgcgac
     2881 ccagacacgc tcacccggct ggtccgccgg agtgtcgaga tcaaggccga ggtggtgagt
     2941 gacgatgagc gggagggagg acgccgggcc attctcaacg ccggccatac cgttgcccac
     3001 gccctcgagc aggtctccaa ctaccagctg ccccacggcg aggccgttgc gctcgggctg
     3061 gtgctggagt gcgagctggc cgagcaactg ggcctggcag accccggcct ccaccaccgc
     3121 gtctcccagc tcctgatccg gctggggctc ccggaccgga tgcctcccgg gatcgatcgg
     3181 acagccctga tcggcagcat gatgggcgat aagaagaatc gcggcggact gattcacttc
     3241 gcgttgcctg ccacggtcgg tcgcatgcat cgccagcatg gatggacgac ggcagtgccg
     3301 gataccgcga tccggcgggt tctggcgctc tcgaatgccg gttgacgacg ctcgcaaaat
     3361 agccggatgg ccgctcacat ctgctttagc tgcaggaact tgcacgtccg gaaccgggca
     3421 caccgaggcc gccagttctc caccaaagtg gataaaccga cgaaccgttt gtgcataagc
     3481 attttgtgat gtggaaacaa tttttgcttg accgggccac ttgcctttca tatattcgct
     3541 gctcacctct ccgatttatt cggtcacagc accaaaaatc acagcccgtt ccctctgcgg
     3601 ggtttgttta tgacgcatgt gcgtaccggg aaagcccgcc cgtttgctcg ctcaattcct
     3661 tccggcgcgt tcgatcagta cctgctcgac attcagaagc tccccatgat ctccgacccg
     3721 gacgaggaga gacggctggc gcgtcgggcc gtggctggcg acgaaaccgc ggctgagcgg
     3781 ctggtcaccg ccaacctgcg gttcgtaatc tcgtacgtga agaagtacca gggtcacggg
     3841 ctggacctct cggagttggt ggccatcggg aacgaggggc tgctcaaggc ggtcaagaag
     3901 ttcgaccccg accatggagt aaagttcatc tcctatgcgg tatggtgggt ccgtcaggcc
     3961 gtcttgaagg ccctcgccga gcagacccgc agcgttcgca ttcccctgaa ccagaactcg
     4021 gcactggtcc ggatgtcccg ggccaagggt tttctggccc aggagcttgg ccgggagccg
     4081 accgacgccg aaatcgccat cgcgcttaac gatacggtgg agaacatccg ctcggctcac
     4141 cggatgacct cgaccgaggt atcgctggat gcaccggtcg aaaggcagga ccggggcgcc
     4201 agtactttcg gcgagcgggt ggccggcacc ggtggcatcg agatcgagga gatgaccgac
     4261 gtccgactgc agcgagaatt catcgatcgt attttcgaac gccatctcac cccacgcgaa
     4321 cgcaagatcc tgtcgctcta ctatggcctg gaggaaggct ccgaggcgct gaccctggaa
     4381 aagatcggtg cattgctcgg tgtcacccgg gaacgtatcc ggcagattcg cgaacgggcc
     4441 ttcgagaagc tgcgcgactc tcccgatgtc agggcgttgc gtggtttttg gggagcggca
     4501 taagacacgg tgagcagtga gccgtgagcg gtaagcgggg ggcttcggat caccggagcc
     4561 ccccgctcac ttctgatcgc tcacccctta ccttacgacc atgcccttcc ggcttcccat
     4621 ctttccactt tcggtcgtac tgttccccgg ggctccgctg ccgctccaca tcttcgagcc
     4681 gcggtacaaa cgcatgctgg ccgattgtct gttgggcgac cggcgattcg gcatcacccc
     4741 ggtgaacagc aactcggacc tgccgggtcc tggatcagtc gggtgcgttg ccgaggtacg
     4801 ggtgaaccag gagctcccgg acggacggtc gaatgtcgtc gtcgtgggag gcccccggtt
     4861 cgtgctttcg cgcttactgg aggagcccca tccctacctc atagcgatgg ttcagacctt
     4921 cgacgacgat gccgattcgg agcctgccgc cgaggacatc tccgagctgc gtgagctctt
     4981 cgggcgctac ttcgccggcc tgcgcgagct taacgacgcc ataccggagg agccggccct
     5041 tccggatgat gcatccagcc tgtcatttca tattgcgagc ggtatcgagt gcgacctcgg
     5101 ggtgaaacag cggttgctgg ccgagcgctc gatctcccgg cgaatcaagg ccttgatcct
     5161 gctccttccg gtgctcacga gcgccgtcga gttgggattg ggggtgcacc gtcgcgccca
     5221 caccaacggg aagggtggag cgattcccga cgccctggct caatgaacgc atccctcctc
     5281 acggcgctga accggatcgt cggctcccgt tgggtacgtc accggcgagc cgagctggtg
     5341 acgtacgcga tggacgggct gcctacccac gagtcccttc ccggggtggt cgtcataccg
     5401 gagacgcctg cccaggtgcg cgagatcgtg cgactgcttc atctgctgca ggtgtccttc
     5461 gtcgcccggg gcgctggaac gggtctctcg ggcggtgccc tcgccgaccc cgacacggtg
     5521 ctgatcgccc tgacgcggct gaaccggatc ctcagtgtgg acccggtgca gcgtcgcgcc
     5581 gtacttcagc ccggggtggt caatgcgcgg ctgtcggagg cagtgcttcc gctgggcctg
     5641 cactacgtgc cggatccctc cagccaggcg gcctgtaccg tgggcggcaa cgtggccgag
     5701 aatgcgggtg gccctcactg cctcaagtac ggcgtcacca ccaaccacat cgtggcgctc
     5761 gaggtcgttc tgccggatgg gtcggtcacg agactcggtt cattacaagg cgagccctgg
     5821 gggcccgatc tggtggggtt gtttgtcggc agcgaaggaa tgttcggaat cgcgaccgag
     5881 atcaccgttc gtctggagcg cattcccgaa agtgtgcgca ccatgctggc cgacttctcc
     5941 accgtgcggg ccgcgagcga ggccgtatcg gcaatcatcg ccgccgggat cctgcccgcc
     6001 gcgctcgaaa tgatggaccg tgcctgtgtc gcggcagtcg aagcttccat ctacgcggcg
     6061 ggatatccga cggacgcggc ggccgtcctg ctggtcgagc tggacggaca gaccgatgcg
     6121 gtggaggccg aagcggccac ggtacgcgag atcctgtccg accgcggcgc gcgcgaagtg
     6181 cggagcgcat ccagcccggc cgaccgggcg cggctgtggc aaggccgaaa gaaagccttc
     6241 ggagccatgg ggcgaattgc ccccgatctc gcggtgcagg atgccgtggt gccccgctcg
     6301 gcgttacccg atatcatgga tcagatcgag aagatccgtc tggtacacga cctcaccatc
     6361 agcaacgtat tccatgcggg ggatggcaac cttcacccca acatcagctt cgaccgacgg
     6421 gacccggcgg ttgcggcccg ggtgcgggta gcctgccgcg agatcatggc cgcctgcgtg
     6481 gccgcgggcg ggagcattac cggtgagcac ggggtgggaa acgacaagct tgactacatg
     6541 gcctggatct tcaccgccga gacgctgggc gcgatgcagg cggtgcgtcg cgccttcgat
     6601 ccgtcggaga tggccaatcc cgggaaggtg gtgcccgtgc atgcctgccg tgagtggtgt
     6661 gtcgtgaaga gcctgcgcca atgagcgacg cgatctttac tcggctccgg gccctgctcg
     6721 gcacgacggg agtagagcgc gacggcgatg gggtgccgcg cgccacgccg gatacgcccg
     6781 attccctcac cctggtatgc cggttggccc acgaggaagg ctggaagatc cgggtcgaag
     6841 gccggggaac ctggctgccc tcggacgcgc ccgccgacct ggcggtgagc actcgggggc
     6901 tggagcagat cgtgtcagtc agcccggccg acctggtggc gacggtccaa gccggcacct
     6961 cgctcgaagc gctcagacgc cggttggcag actacggcat gtggctggcg atcgatccgc
     7021 cgggaaggcc ggatcggagc atcggctcgg tggtggccac ggccacggcc ggtcccttgc
     7081 gccagggatt cggaccggtg cgggaccacg tgctcggctg cgcggttgcc accggggatg
     7141 gcaggctggt gaatgccggc ggacgggtgg taaagaacgt agcgggcttc gacctcacca
     7201 agctccaggt cggcgggttt ggcgggttcg gcattatcgc ggagatccac cttcggctgc
     7261 ggtcactacc tcgggctgac gttactctgc tggcccgggg tgctcgggac cagctcacct
     7321 ccggcgccag ggagctgatc gacgcccaag tcctgcccgg cgcgctggag ctcctctcgc
     7381 cggcgctcgc cgcggaagcg gactgggttc tcgccgtgcg attcgtggga accgacgcgg
     7441 cggtgcaggc ggatgtccgc cggcttgtct cggtcggcga actccagtgg cagccgcttc
     7501 cggcagaccg cacggcggcg ttctggagcg tggccgcacg aggcaccctg ggcggtccaa
     7561 tcaccctgcg cctcggcgtt ctgggcgacg gcgtggacga caccatcgac ctcctggccc
     7621 acgacctcga cgagggcctc gtctcggcgg gagccggact gggaatgatc cgctggactg
     7681 gcgatgccac ggtggaccgg atccgctccc tgcgtcgcgc tgcggcggct cgagagatcc
     7741 ccatgaccct cgagcgcgcc ccctggtcgg tccgccggtc gctgggacat ttcggggcgt
     7801 atcgtgaagg ggtcgggaaa atcgtgggcc gcctgcgcga cacgttcgac ccgggccagt
     7861 gcctgaacgt ggcactcgag ggggcggatt gaggatggag agcgcgccaa acggctatgc
     7921 cgccctcgat ccgtgcgtgc actgcgggtt ctgcctccca gcatgcccga cctatctggt
     7981 gaccggagac gaaggccaca gcccgcgcgg acggatcgtg ctcatgcggg cgctggaaag
     8041 gggcgagatg gacgccaacg accctgggct gttcgagcac ctcgatgcct gtctggggtg
     8101 ccggggctgc gaaccggctt gcccctcggg cgtcggttac ggccgcggat tcgaagccgc
     8161 ccgggaacag ctcttccagg cgcgtgggct ctcgccggcc gcacgcctgg tgctcggcgt
     8221 gttccgtcac cggcttgcat ggcggcccct cttcgccctg gcccggctgc tccgggcaac
     8281 gggtctgccc cgcctgcttg ccggacgcaa ccggctacgc ttcggaatgg gcatgctggc
     8341 cgcgtccgct gagcctcgtg aaaagacgga gaagacggag aggacgggga ggacggaggt
     8401 gttgaggacg gaattgtttc cgtcctctcc caccgtcgcc ctcttccgcg gctgcgtcat
     8461 gggtgcgctc ttcaatcacg tgcacgaggc aacccggcgg accctcgaag ccaacggcta
     8521 tcgtgtcgtg cagatggccg gccaggtctg ctgcggcgcc ctgcacgagc acgccggcga
     8581 ccgccacggc gcgaccgggc tcgcgcaagc caatgtgcag gccctggcgg aggggaccga
     8641 cttcgtcgtc gtgaacagcg cggggtgcgg cgcgttgctc aaggactacg ggcatctgct
     8701 cggtaccgag gctgccgcgc ggctcggggc caaggtccgc gacgtctccg agctgctggc
     8761 cgagcggggt ccccgcaccg gcgc
//
LOCUS       DASYRV010000390        10742 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1402398, whole genome shotgun sequence.
ACCESSION   DASYRV010000390 DASYRV010000000
VERSION     DASYRV010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10742
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1402398"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            185..628
                     /locus_tag="VGQ24_10455"
     CDS             185..628
                     /locus_tag="VGQ24_10455"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HEV8455305.1"
                     /translation="MTKLVFWDVDTLSDFMKSDGKLYVPGSEQIIPAVKRLTDFAHAN
                     RIPIIASADNHEMSDAEISADPDWKTTFPPHCMRGTPGQRKIAETELKNPLVIEPELQ
                     NPDALADQIRAHRGDILLHKRALDVFTNPNVPAVLQALEPEAVVI"
     gene            complement(1173..1529)
                     /locus_tag="VGQ24_10460"
     CDS             complement(1173..1529)
                     /locus_tag="VGQ24_10460"
                     /inference="COORDINATES: protein motif:HMM:NF016854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HEV8455306.1"
                     /translation="MAVSESYKAYVVEQLQIIGPITAKPMFGGIGLYRAGTFFGLMDD
                     DALYFKVDDSTRGDFEDIGCQPFRPYGEGSYSMQYYEVPADVLEDRSVLREWAEKAVA
                     VARKGATAKKRRPPSS"
     gene            complement(1642..2265)
                     /locus_tag="VGQ24_10465"
     CDS             complement(1642..2265)
                     /locus_tag="VGQ24_10465"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEV8455307.1"
                     /translation="MSIRKLTATISGVVAAAIVATAAVTPAAAQGGVELTPWAGVYIP
                     TSNSFSTLTDDFKRDVSVIGGARLSFWGTGHLGFEVTAGYAPARVGGETVNETSTNLL
                     VANARLLLALSPVTSKVGVFVGGGGALLTRGKNTFDDDRSSTDLGGTLGLGFRFGGGD
                     DSRVGFRLDIEDYLYNGDFGGGNDFQNDIVTSLGVSIALGGKASEDE"
     gene            complement(2510..3151)
                     /locus_tag="VGQ24_10470"
     CDS             complement(2510..3151)
                     /locus_tag="VGQ24_10470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEV8455308.1"
                     /translation="MRSNAWIARVLFVGGVLVAGTNPLAAQRISIAPNIGVYIPTTEL
                     VKAASGQDFKQEISLTLGGRMGIALSNRLGMEFTGSYAPGNLTITQSGFSDQSEDANI
                     FTGSGRISYQLVPFSSPIAFVVTGGVGVINRSGEFYAGTTNKTDIGGTVGASARFRLG
                     KLLRLQISAEDYVYKPRAEIPGFSPSDEKKTQNDVHLSFGVGIPLLGLGQSGQ"
     gene            complement(3189..3542)
                     /locus_tag="VGQ24_10475"
     CDS             complement(3189..3542)
                     /locus_tag="VGQ24_10475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455309.1"
                     /translation="MRALRQVLWSGLAAVALVSASAVPGHAQGKVKYKHYTVTSDRAV
                     TVTRTVLVQRGYNVVRIERVGATQIVYYRRGNMGRGKGKGPVQRMVIRTIRNRVVFED
                     AEPDVLIDIDVKLKL"
     gene            complement(3709..4713)
                     /gene="ligD"
                     /locus_tag="VGQ24_10480"
     CDS             complement(3709..4713)
                     /gene="ligD"
                     /locus_tag="VGQ24_10480"
                     /inference="COORDINATES: protein motif:HMM:TIGR02779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-homologous end-joining DNA ligase"
                     /protein_id="HEV8455310.1"
                     /translation="MNRPLKVLARNAPQRSRQRPLPSWIPPMLATLSEVFPTEGKWVY
                     EPKLDGVRALIYASEGAARVYSRNRKPLNDAYPELVEALGPAVRGDTVLDGEIVAFDP
                     ERGVTSFSRLQQRMQLRDPVRARRSQVAVYLYLFDCLYYEGVDLTGLPLLDRKAVLRD
                     VVWYDDPIRFTPYKTSGGVAMLRAACEEGAEGIIAKRATSRYVSTRSTDWLKIKCLRR
                     QEFVIGGYTAPQGSRERLGALMVGYYDGRALRYAGKVGTGYDRRTLEDLHRRLVPLHR
                     PTSPFSEGPTPAGEIQWVEPKLVGEVGFSEWTSAGLLRHPRFLGLRSDKPARQVRRED
                     "
     gene            complement(4710..5780)
                     /locus_tag="VGQ24_10485"
     CDS             complement(4710..5780)
                     /locus_tag="VGQ24_10485"
                     /inference="COORDINATES: protein motif:HMM:NF045432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455311.1"
                     /translation="MRRDVGDLLDQLGAKKPQLTLAVGGYELPVTNLEKTLWPGSGRA
                     RPLTKRDYLQYLARISSWLLPHLAGRPLFVTRYPNGVTGKSFYQKHWDNPPEFVRTVS
                     IYSSHTEGDGDYLICENLPTLLWLGQMAGLEMHPWFSRIDPAPDARGRGRKFSGSEST
                     LEKSVLNYPDFVVFDLDPYQYSGREGKGEEPELHRKAFKRTRDLALRLRDLLGRLGLK
                     TFVKTSGRTGLHLYLPILRKLNYDSVRGIAETIGRHTIQEWPDEVTLEWSVERRTGKI
                     FFDYNQNTRGKSLASIFSPRRHPLGTVSMPVDWGHLERVYPTDFTLRTVPGVLEAEGD
                     PWAGILAAKQDLGDLLEATTAR"
     gene            complement(5777..6616)
                     /locus_tag="VGQ24_10490"
     CDS             complement(5777..6616)
                     /locus_tag="VGQ24_10490"
                     /inference="COORDINATES: protein motif:HMM:TIGR02772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HEV8455312.1"
                     /translation="MAKAIWSGSISFGMVTIPVKLYGATQSKDIRFHLLHATDGARLQ
                     QKRWCPTDDAEVPWSETVRGYEYAKGQYVVLTEEDFERLPLPSKHTIDLSAFVEEREI
                     DPVFYERSYYLEPGERAEKPYALLLKALAEKKLSAVATITIRQKEQLCVLRPHEDTMM
                     LETLYYPDEVRLERGVDPSNVKVSDRELDMAFTLIDILRRPFDPAEYHDHYREALAEL
                     IEAKLEGKQVVKAPATREARVFDLADALKRSVEAAKKAKPKPPARARSRTARSARRTR
                     KVG"
     gene            complement(6835..7764)
                     /locus_tag="VGQ24_10495"
     CDS             complement(6835..7764)
                     /locus_tag="VGQ24_10495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455313.1"
                     /translation="MYRIELSPGEETAFRSIEELAVAIKRGVVTSRARIWHTASGKWL
                     PIEFHPHYRIAASMQLTTADLVAGAPVKPLELLTLGELMDPPAPPVRPAVEPEQPPRV
                     KRTSEPVKRIPESAKRAPESVKRTPEPEPKPRKKAVAKARRPRSGRQSMRIALAGALL
                     IGCAHLSLSAVSAALSGNIASRSQTHRHLITTPTNTAQQNRPETTAAAVLPGLPGVPR
                     SGIRSTSAARPRSAAPLPTESAAATPPYAAFRADSESGIQPAPSMDITAPPPLSGDSL
                     AKKMVDSTGKKTLKRILRTIGGTAPAEQTRPRR"
     gene            8045..8854
                     /locus_tag="VGQ24_10500"
     CDS             8045..8854
                     /locus_tag="VGQ24_10500"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEV8455314.1"
                     /translation="MPEKPLATRPAACEWRFVIEGKLLPTAALSAENVTKRYGPRLAL
                     DGVSIDVAAGECVALIGESGAGKTTLLRCFNRLVDPDEGRILIAGIDARELDPFMLRR
                     RTGYVPQDGGLLPHWRVQRNVELVPWLCHLENRSELALRVMRLVGLEPELFASRWPRE
                     LSGGQRQRVAVARGLAVNPGVVLLDEPFGALDAISRADLQSTFLGIRRELGVTSVLVT
                     HDLDEAFLLADRVVVMRNGRVEQAATPGQLREAPASDYVRQLLLRARVPAA"
     gene            8851..10404
                     /locus_tag="VGQ24_10505"
     CDS             8851..10404
                     /locus_tag="VGQ24_10505"
                     /inference="COORDINATES: protein motif:HMM:NF015995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter
                     substrate-binding protein"
                     /protein_id="HEV8455315.1"
                     /translation="MSVATLPAMLLLVLGVPAMQAQRTQSRPIVVASKPFGESYLLAE
                     MFAQLLEARGFVAARRLGLGATEIAFSALRSNRIDVYPEYTGTGLLAILGERPSPDPR
                     QVYRQVAREFRARYGTRWLPPLGFQNTYAIAVRRETALRLRLRTLSDLARVSSTLRAG
                     LTPDFIGRPDGLPGLAKAYGIRFRSVRALLAAVKYQALAAAEVDVIDGYSTDGFIVRY
                     DLVVLEDDRGFFPPYEAAALISPAFARDVPAGVAALTELSGLLTEEDLRRLNRRIEVD
                     NEPIPDVAADALRSLGLTQAGSARVRPVKDTSAGGVLEYLWQERNTIISLTLRHLLLV
                     GVSLAGALALALPLGLALERGRTLAESVIRAVGLLQTLPSIALLAFMIPLLGIGVVPA
                     LVALFLYSLYPILRNTYTGVRDAAPDAVGAAWALGMTPRQVLRHVRLPLAAPVIMAGI
                     RTAAVINVGTATLAAFIGAGGLGDPIAAGLALSDTRMILSGALPAALLALLVDGALGI
                     CERMVAPRG"
     gene            10409..10702
                     /locus_tag="VGQ24_10510"
     CDS             10409..10702
                     /locus_tag="VGQ24_10510"
                     /inference="COORDINATES: protein motif:HMM:NF018004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1015 family protein"
                     /protein_id="HEV8455316.1"
                     /translation="MRLKPFRAVRPQPELASEVAAVPYDVVNRSEAAELVRGKPHSFL
                     HVGRSDIDLPEDTDPHDPRIYSRAREALDEFLARGILIRDDEPALYLYRQIME"
BASE COUNT         1836 a         3392 c         3474 g         2040 t
ORIGIN      
        1 gtgcgcgaag gtcggacggg agtatcagcc gaatccgaga ttggagaagg tagattagag
       61 attcattcgg atgtcaccct gagccgtcgc gcagcgaagg cgagggggcc gaagggccgg
      121 ttgagctacg gccccctcgg gcactaaacg cgccctcagg gggacaaccc atgctggagg
      181 atgaatgacg aagctcgtct tctgggacgt cgacacgctg tccgacttca tgaagtcgga
      241 cggaaagctc tacgtccccg gcagcgagca gatcatcccc gcggtcaaga gactcaccga
      301 ctttgcccac gccaaccgca ttccgatcat cgcctcggcg gacaaccacg agatgtcaga
      361 tgccgagatc agcgccgatc ccgactggaa gaccaccttc ccgcctcact gcatgcgagg
      421 cactccgggc cagcgcaaga tcgcggagac cgagctgaag aatccactcg tgatcgagcc
      481 cgagcttcag aatccggacg ctctggccga tcagatccgg gctcatcggg gtgacattct
      541 cctacacaag cgcgcgctgg acgtcttcac caatccaaac gttccagcgg tgctgcaggc
      601 gctcgagccc gaggcggtgg tgatctaggg cgttgccacc gatttctgcg accgctacac
      661 cgtcgaaggt ctgctgcgct ctcttcccca gggagtgctg tacctggtga cagacgcgat
      721 tcgtgccatc tatcccgagg aaggtgagcg actgatcgcc aactggcgcg atcgtggcgt
      781 caggatggtt acagtgggac agatcgtgga ggagaatgtg ttggactcac atttgtcccc
      841 tcgttcggtg gcgccgacgc gctgaacccc ggcccgtttg tgtgatccac cgcacagcgg
      901 ctccctcccg ccgatctata cttggcgaca gtgagagtgt tgctggacag cgaaccgcga
      961 gacgtccgaa caagccctga gtcccctgct ccgtggccgg acgagctatc caacacaacg
     1021 ctttcgccgc ttctccttca tacctcccct tcttctctta tctcgccggg aacgggcgct
     1081 tagcgcccgt tccacccacc tttttgttgg ctattggcta ttggctacgc gccattggcc
     1141 acctaggccg tagcaaaacg cgccctccta gctcaggagg atggcggtcg ccttttcttg
     1201 gcggtggcgc cttttctggc caccgccact gctttctccg cccattccct caagaccgat
     1261 cgatcctcca gcacgtccgc aggaacctca tagtactgca tggagtacga gccctccccg
     1321 taggggcgga acggctggca gcctatgtcc tcgaaatccc cccgggtgga gtcgtccacc
     1381 ttgaagtaaa gcgcgtcgtc atccatcagg ccgaaaaagg tgccggcgcg atagagaccg
     1441 attccgccga acatcggctt ggcggtgatc ggtccgatga tctgcagctg ctcgactacg
     1501 tacgccttgt agctctcact cacggccatt agacggcttc cttgggacgg cgtctgctaa
     1561 ctgttcattg gtaattgcgc cgagggacgc gcaaccggaa gctctccgat cacgcgcccc
     1621 tggaccttgc ggccgaccga tctactcgtc ttcgctggcc ttgccaccca gcgcgatgga
     1681 gacgccgagg gaggtcacga tatcgttttg gaagtcattc ccgccgccga agtcaccgtt
     1741 gtacaggtaa tcttcgatgt cgagccggaa cccgacccgg ctgtcatcac ccccgccgaa
     1801 gcggaagccg agcccgagag tgcccccgag gtcggtgctg ctgcggtcgt cgtcgaacgt
     1861 gttcttaccc ctggtaagga gcgcgccacc gccgcccacg aagaccccga ctttactggt
     1921 gacggggctc agagccagga gcaaccgagc gttggcgacc agcaggttgg tgctggtctc
     1981 gttcactgtt tcgccgccga ccctagcggg ggcgtagcct gcggtcacct cgaagcccag
     2041 gtgaccggtg ccccaaaagc tgagccgggc tccgccgatg acgctgacat cgcgcttgaa
     2101 gtcatcggtg agagtcgaga atgagttgct ggtcgggatg tagaccccgg cccagggggt
     2161 gagctcgacg cccccttgcg cggcagcagg cgtaaccgcg gcggtggcta cgattgcagc
     2221 cgcgaccact cccgaaatgg ttgctgtgag cttgcgaatc gacatagcac actccctgat
     2281 tgtcagaaac tattgtggta acaggacctg gcgcgggtat ccaaagatgc gcgccagggt
     2341 ccaacaatgg tccttatggg tcggttggcg ctgtgaagcg gaggcggggc agagtgtgaa
     2401 cccgatcacc gtccgatggt gacgggacct gccgaaatgc agagggcggc tccgcaagcg
     2461 aagccgccct ttcattttag aagcctgcaa tagaagaggt ctgcccgggc tattgccccg
     2521 actgtcccag gccgaggagc ggaatgccta ccccgaagga gaggtggaca tcgttttggg
     2581 ttttcttctc atctgaggga gagaaacccg gaatttcggc ccttggcttg tagacatagt
     2641 cctcggcgct gatctgaagg cgcagcaatt tcccgagacg gaaacgggca gacgcgccga
     2701 ccgtgccgcc aatgtcggtc ttgttcgtgg tgccggcgta gaactcgccg ctgcgattga
     2761 tcacaccgac accaccggtc accacgaacg cgatcgggct gctgaagggc actagctggt
     2821 agctgatccg gccgctcccg gtaaagatgt tggcgtcctc actctgatcg ctgaacccgc
     2881 tctgggtgat cgtcaagttt cccggcgcgt acgatccggt aaactccatc cccagccggt
     2941 tgctcagggc gatccccatg cggccgccga gggtaaggct gatctcctgc ttgaaatcct
     3001 gaccgctcgc tgccttcacc agctccgtcg tcgggatgta gacaccgata ttgggagcga
     3061 tgctgatccg ttgcgctgcc agcggattgg ttccggccac cagtacaccg cccacgaaca
     3121 aaacgcgagc tatccacgcg ttgctacgca ttgcgcctcc ggtcgggtac gaggggaagg
     3181 gtgacgattc agagcttgag cttgacgtcg atgtcgatga gaacgtccgg ttccgcgtct
     3241 tcgaagacca cgcggttgcg aatcgtgcga atgaccatcc gctgaaccgg acctttgccc
     3301 ttgccacgcc ccatattccc gcgacggtag tacacgatct gggtcgcacc gacccgctcg
     3361 atccgcacca cgttgtagcc ccgctgaacc agcaccgtcc gggtcaccgt cacggctcga
     3421 tcgctcgtca cggtgtaatg cttgtacttg accttgccct gggcatgtcc cgggacggcg
     3481 ctcgcgctca cgagcgccac ggcggcgaga ccagaccaga gcacctggcg gagtgcgcgc
     3541 ataccagctc cttcttgaca catgaaaagg gaaagacgga cttggtctcc ctgggcaaaa
     3601 accgtgcgga gctggaccga cagactactt agctgtcagt cttagacttg cagtgatggg
     3661 acagggatgg gggatgggga aatgagggct ttgaggcggc ttgccagatc agtcttcccg
     3721 ccgtacctgg cgggccggct tgtccgatct gagaccgaga aatcggggat gtcgcagcag
     3781 gccggcggaa gtccattcgg agaaaccgac ctctccgacc agcttcggct cgacccactg
     3841 gatctcgcct gcgggagtgg ggccctcgga aaagggcgat gtcggacggt ggagcggcac
     3901 cagacggcgg tgcagatcct ccagcgtcct acgatcgtag ccggtgccga ctttcccggc
     3961 ataacgcagt gctctgccgt cgtagtaacc gaccatcaac gcaccgagcc gctcgcgtga
     4021 tccctgcggc gcggtgtagc cgccgatcac gaattcctgg cggcgcagac acttgatctt
     4081 gagccaatcg gtcgagcgcg tactgacgta tcgcgatgtt gcccgcttgg cgatgatccc
     4141 ctcggctccc tcctcgcagg cggcccgcag catcgcgacc ccgccactgg tcttgtaggg
     4201 cgtgaaccgg atcggatcgt cgtaccagac cacgtccctc agcaccgcct tgcggtcgag
     4261 tagtggcagc ccggtgaggt cgactccctc gtagtacaga cagtcgaaca ggtagaggta
     4321 gaccgccacc tggctgcgcc gcgcgcgcac cgggtcgcga agctgcatcc gctgctgaag
     4381 gcgggagaaa ctggtgaccc cgcgctccgg atcgaaggcc acgatctcac cgtccagcac
     4441 ggtgtctcct ctcaccgccg gccccaaggc ctcgaccagc tcgggatacg cgtcgttgag
     4501 cggcttccga ttgcgggagt acactcgcgc cgcaccctcg ctggcataga tcagcgcccg
     4561 tactccatcg agcttaggct cgtataccca cttgccctca gttgggaaaa cctcgctgag
     4621 cgtggccagc atcggtggaa tccaggaggg caggggccgt tgccgcgagc gctgcggcgc
     4681 gttccgggcc aggaccttca acggacgatt catctggccg ttgtcgcctc gagcaggtcg
     4741 cccagatcct gcttggcggc cagtatgcct gcccatggat ccccttcggc ctcgagaacg
     4801 cccggcacgg tgcgcagggt aaagtcggtg ggatacaccc gctccagatg accccagtcc
     4861 accggcatgg aaaccgtgcc gagtgggtgg cgtcggggcg agaagatgga tgcgagtgac
     4921 tttccccggg tgttctggtt gtagtcaaag aagatctttc cggttcgccg ctccaccgac
     4981 cactcgagcg tcacctcatc aggccactcc tggatcgtat gtctgccgat cgtctcggca
     5041 atgccgcgca ccgagtcgta gttcagcttc cggaggatcg ggaggtacag gtgcagcccg
     5101 gttcggcccg aggtcttcac gaaggtcttc aggccgagac ggcccagcag atcgcggagc
     5161 cgcagggcca ggtcacgagt ccgtttgaag gccttccgat ggagctcagg ctcctcgccc
     5221 ttaccctcgc gaccggagta ctggtatggg tccaggtcga agacgacgaa atcgggatag
     5281 ttgaggaccg atttctcgag ggtcgactcc gagccggaaa acttgcgccc ccgcccgcgc
     5341 gcatcaggag ccggatcgat ccgggagaac caggggtgca tctcgagccc agccatctga
     5401 ccgagccaga gcagcgtcgg cagattctcg cagatcaggt agtcgccatc gccttcagtg
     5461 tggctggaat agatcgagac cgtgcggacg aactcgggcg ggttgtccca gtgcttctga
     5521 tagaagctct tcccggtgac gccgttagga tagcgggtca cgaagagcgg ccgtcccgcg
     5581 aggtgcggca gcagccagga ggaaatcctg gcgaggtact gcaagtagtc ccgtttggtg
     5641 agcggccggg cgcggcccga cccgggccag agggtcttct ccaggttggt gacaggcagc
     5701 tcgtacccgc cgacggccag cgtcagttgt ggcttcttcg ctccgagctg atcgagcagg
     5761 tccccgacat cgcgtctcat ccgaccttcc gggtgcgccg ggcggagcgc gcggtacgtg
     5821 accgggcacg ggcgggcggc ttgggcttcg ccttcttggc cgcttccacg ctacgcttga
     5881 gggcgtcagc cagatcgaat acccttgcct ctcgggtcgc gggggctttc accacttgct
     5941 tgccctccag cttcgcctcg atgagctccg ccagtgcctc gcggtagtgg tcatgatact
     6001 cggcgggatc aaatggccgg cgcagaatgt cgatcagcgt aaaggccatg tccagctcgc
     6061 gatccgacac cttcacattg ctgggatcca cgccacgctc caatcggacc tcgtccgggt
     6121 aatagagcgt ctccagcatc atggtgtcct cgtgcggacg aagcacgcac agttgctcct
     6181 tctgccgaat cgtgatggtg gcgacggcgc tcagcttttt ctcggctaga gccttgagca
     6241 ggagggcata gggcttctcg gctcgctctc ccggttcgag gtagtagctc cgctcgtaga
     6301 aaaccggatc gatctcccgc tcctcaacga aggcactcag atcgatagtg tgtttgctcg
     6361 gcagcggaag gcgctcgaag tcctcttccg tgagaacgac gtactgaccc ttggcatact
     6421 catagccacg gaccgtttcg ctccagggta cctcggcgtc gtcggtagga caccagcgct
     6481 tctgttgcag ccgggccccg tccgtcgcgt gcagcaggtg aaaccggatg tctttgctct
     6541 gggtggcacc atacagcttg accggtatgg tcaccatccc gaagctgatc gagccactcc
     6601 agatcgcctt ggccatcggt cttccttccg gctgcgcgga gcaccgttga cgggtgcact
     6661 ggcgcacaca tccgcggatc tccacagaaa cagcgagaag cgccggggtt atgcacatag
     6721 gtgcggcgct tatccacagg tttatcaaca taagctgttg ataaacaatg acttacaagc
     6781 tcgattattg gtcgatcaga ggaggggtgc tgtgggttgg gtcacactga gcgactaacg
     6841 cctggggcgt gtctgctctg ctggggcagt gccgccgatg gtccggagga tccgcttgag
     6901 cgtcttcttc ccggttgagt ccaccatctt ctttgccagc gagtcgccgc tcagcggggg
     6961 tggcgcggtg atatccatcg atggtgccgg ttggatgcct gattcggagt ccgcgcggaa
     7021 agccgcatac ggaggagtag cagctgccga ttcggtgggg agcggagctg ccgacctggg
     7081 ccgggcggcg ctggtcgagc ggatacccga gcggggaacc ccaggcagtc cgggcaatac
     7141 ggcggcagcg gtggtttcgg gccggttctg ttgtgcggtg ttcgtcggtg tcgtgatcaa
     7201 gtggcgatgc gtctgggacc ggctggcgat gtttccggat agtgcggccg acaccgccga
     7261 gagggacagg tgagcgcacc cgatcaacag ggctccggcc agagcgatgc gcatcgactg
     7321 gcggcccgat cgggggcggc gcgcctttgc cacggccttc ttgcgaggct tgggctccgg
     7381 ctcaggagtg cgcttcaccg actcaggagc gcgcttcgcg gactcaggaa tgcgcttcac
     7441 gggctcagaa gtgcgcttca cccgtggggg ctgctccggc tccaccgcag gacgcactgg
     7501 cggcgcggga ggatccatca gctcaccaag cgtcagcagc tcgagcggct tgaccggggc
     7561 cccggccacg aggtcagccg tggtgagctg catcgaggct gcgattctgt agtgaggatg
     7621 gaactcgatt ggaagccact tgcccgaagc ggtatgccag atacgggcgc gtgaagtgac
     7681 caccccgcgt ttgatcgcca cggccagttc ttcaatcgac ctgaacgcgg tttcttcgcc
     7741 aggtgagagc tcgattcgat acatcctgga tcctcacgag gttgaggctc gtcatcgtct
     7801 gcaaatttca cgcgcgtggc gaatgcactt tcgttcatgt tcgagagcca gacgatcctc
     7861 gctgcaaaag ttgatgagtg cccgccatca ttcgtcgggc cgatgcggga aatgccgccg
     7921 cgggcaagta cttctggtga gcgtccccgt cgcggcgcca cgtgcttctt tctgcagttt
     7981 gcctgctcgg cagccgcgat gcactttggc gcagtgaagc cgctgcttcg actcgtctgg
     8041 tagattgcct gaaaagccgc tggcgaccag gcctgcggca tgcgaatgga ggtttgtcat
     8101 cgaggggaaa ctgctgccaa cggctgcgct gagcgccgag aacgtaacca agcggtacgg
     8161 tcccaggctg gcactcgacg gcgtttcgat cgacgtggca gccggcgagt gtgtcgcgct
     8221 gattggcgag agcggcgccg gcaagaccac gctgctgcgc tgcttcaacc ggctggtcga
     8281 tcccgatgag gggcgaatcc tcattgccgg catagatgca cgggagctcg acccgttcat
     8341 gctccggcgg aggacgggat acgtgccgca ggacggcggc cttcttcctc actggcgcgt
     8401 gcagcgcaac gtggagctgg ttccctggct ctgtcatctg gaaaaccgga gcgagctggc
     8461 cctcagagtg atgcgtctgg ttgggctcga gccggagctc tttgcctccc ggtggccgcg
     8521 agagctgtcc ggaggccaac gccaacgggt ggcggttgcc cgggggctcg ccgtgaatcc
     8581 cggggtcgtg ttgctggacg agccgttcgg cgcactcgat gcaatcagcc gagccgacct
     8641 ccagtccacc tttctgggca tccgccgcga gctcggtgtc acctccgtgc tggtcaccca
     8701 cgacctcgac gaggcgttcc tgctggccga ccgggtggtc gtgatgcgga acggccgagt
     8761 ggagcaggcc gcgacccccg gtcagctgcg ggaagctccg gcgagcgact acgtccgaca
     8821 gctgctgttg cgggcccgag tgccggcggc atgagcgtgg cgactcttcc ggccatgctg
     8881 ctgctggtcc tcggagtgcc ggcgatgcag gctcaacgca ctcagtcccg gccgatcgtg
     8941 gtggcgtcga agccgtttgg cgagtcctac ctgttggcgg agatgttcgc ccagctgctg
     9001 gaggctcgcg gcttcgtggc tgcccggagg cttgggctcg gggccaccga gatcgctttt
     9061 tcggcgctgc gatctaatcg gatcgatgtc tatcccgagt acaccggaac cggattgctg
     9121 gccatcctgg gtgagcgtcc cagtccggac ccccgacagg tctatcgcca ggtggcgcga
     9181 gagtttcgcg cgcgctacgg cactcgttgg cttcccccgc tcggcttcca gaacacctac
     9241 gcgatcgcgg tacggcggga gacggcgctc cgacttcggc tcaggacgct gagcgacctc
     9301 gcgcgagtgt cgtccacttt gcgcgcggga ctgacgccgg acttcatcgg ccgccccgat
     9361 gggctgcccg gcctggcaaa ggcctacggc atccgcttcc gttcggtgcg ggcgctgctc
     9421 gcggcggtga agtatcaggc gctggccgcg gcagaagtgg acgtgatcga cggctactcg
     9481 accgacgggt tcattgtccg gtacgacctc gtggtcctgg aggacgaccg tggcttcttc
     9541 ccgccgtacg aggctgctgc gctcatcagc cctgcgtttg cgcgcgatgt gccggccggc
     9601 gtggcagcgc tcaccgagtt gagcgggctc ctgacggagg aagacctgcg ccggctcaac
     9661 cgcaggatcg aggtggacaa cgagccgatt cccgacgtgg ctgccgacgc gctccggtct
     9721 ctcggcctga ctcaagccgg tagcgcaagg gtccgcccgg tgaaggatac gtcggcgggc
     9781 ggggtgctcg agtatctctg gcaggagcgc aacacgatca tcagcctcac actccggcac
     9841 ctcctgctgg tgggggtttc tcttgccggg gccctggccc tggcgctacc gctcggactg
     9901 gccttggagc gaggccgcac cctggcggag tcggtcatcc gcgcggtggg actgctgcag
     9961 acgcttccca gcattgcgct gctggccttc atgattccgc tgctgggcat cggggtggtg
    10021 cctgcgctgg tggctctttt cctgtattct ctctacccga tcctgcgcaa cacctacacc
    10081 ggggtgagag atgctgcgcc ggatgcggtg ggcgccgcgt gggccctggg gatgaccccg
    10141 cggcaagtgc ttcgccacgt gcgcctgccg ctggccgcgc cggtcatcat ggccggtatc
    10201 cggactgcgg cggtcatcaa cgtcggcacg gcgacgctcg ccgccttcat cggcgccggt
    10261 ggcctgggcg atccgatcgc agccggactc gccctgtccg atacgagaat gattctttca
    10321 ggcgcactcc cggctgccct gctcgcgctc ctggtggatg gagcgctcgg catctgtgag
    10381 cgcatggtgg cgccaagggg gtagttcagt gcgactgaag ccgtttcgtg ccgtgcgccc
    10441 ccagcccgag ctggcctcgg aggtggccgc ggtgccctac gacgtggtga accggtcgga
    10501 ggcggccgag ctggtgcggg ggaagccgca cagttttctc cacgtcggcc ggtccgacat
    10561 cgatctgccg gaagacaccg acccgcacga tccacggatc tactcgaggg cgcgcgaggc
    10621 actcgacgaa ttccttgctc ggggtatcct gatccgcgat gacgagcccg cactctatct
    10681 ctaccgccag atcatggagt gacgggccca gaccggtgtg gtggggtgcg tgcatattga
    10741 cg
//
LOCUS       DASYRV010000391         3683 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_995262, whole genome shotgun sequence.
ACCESSION   DASYRV010000391 DASYRV010000000
VERSION     DASYRV010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3683
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_995262"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(399..3596)
                     /locus_tag="VGQ24_10515"
     CDS             complement(399..3596)
                     /locus_tag="VGQ24_10515"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEV8455317.1"
                     /translation="MTDVLSRLTAALASHYAIERELGRGGMATVYLARDLKHHRRVAL
                     KVLRPELTTALGPDRFLQEIEIAAQFAHPHIVPVFDSGEAEGFLYYVMPYVVGESLRN
                     RLVREGQLPVEDAVGIASEVANALAYAHGQGIVHRDIKPENILLAEGHAMVADFGIAR
                     AITAIVASTDERMTGVGFALGTPLYMSPEQAAGHRHLDGRADIYSLGCVLYEMLAGEP
                     PFVGPTPQAVISKHAQESPQPLSERRPGVPAQVEQAVTKALYKLPADRFANAAEFAAA
                     LPRYPTPQTPTTPLKTTRPAWQSRHISRATWAFIGALTLAGALIATAFSKRTAPTLDA
                     SLYMVLPFRHRAQSAPLLLNGDQCESLLHDALARWRGVQMVDPLWVADARSRHGSTSS
                     IEDGVAIARERRAGRVVLGEVWQFQDTIYVRGLLYDASGKRLVREQSVRISSDLSDAQ
                     ARFQELADSLLIGGGLVGGVPPRGGGRLSLPAWHAFQDGYAALQRWDLDSAKAKLRQA
                     LAIDPTYGMAQLWLAQVSAWAGEEPESWKQYAAGALASSDSLGPRDHELGEAMLALAE
                     QRFPQACEKFRDLIARDSLDFAAWFGLGDCHGKDPLVVRDSTGAGWSFRGSYHAAVNA
                     YRRALELVPSAHLAFRGETFHRLPDLLYTEPNQIRKGYALTPDTVRFGAFPSMTRDTL
                     EFLPRPMTDVVAAEPGAIPATVNAAVSHNRELMREIATTWLRAFPNRADAHETMAMVL
                     ETLGELTAGRSKDLSALSEVRRARAMATAPGQALRLANMETRFLVKTEQMAAARALAD
                     SVLRAHPKPTLDDARQLRGLAALTGHVHLAAQLQRRAAPEVTFLTSAWEEVNVPLQLA
                     DAALGLFAYSAFGTPTDSLVALEQRVERLIPSYVEPGMRSRARQAMLDLPAVLAFPER
                     GIRPMHRAKAGGNYRLEMQWELARGDTTALRRDFDELREIRRNTHPGDVAFDGTYHEA
                     RLHLAIGDTAEATHLLDLSLNALPTLGTYLLDQLPQVATLVRGMALRAELAAAAGDGK
                     SAKHWAGMVATLWAQSDPELAPLVERMRRISTQNN"
BASE COUNT          644 a         1188 c         1197 g          654 t
ORIGIN      
        1 cgggggataa ggttgtttct tgtcccggtt gatcaggcga gccacaatcc ttccggggct
       61 ccccgccaaa ctcttcgcgt tattcctgtg agttctcagc tccggctgga cggcaacgat
      121 cgggccctca cgacagttgg ctgggcagcc taccgggagt gcgcgctcat ctgacgagcc
      181 ttctcgggga tcgaacttga gctgctccag gtaagcgcgg atttgtgccg gtgtggtaga
      241 atcaagcggc gtagcgaagc ccggcgcggg aacgccaccc cgacaggcaa acacaccaac
      301 tgcgagaagg agaagaacgc cattgctacc tgcacggagc ctccgtgggc ctgtccctga
      361 catggttccc tccctcggtg tgtgctactg tccctacttc agttgttctg cgttgagatt
      421 ctccgcatgc gctcgacgag tggcgccaac tcggggtcgc tctgcgccca aagggtggcc
      481 accatcccgg cccagtgttt agccgatttg ccgtcgcctg cagcagcggc caattccgct
      541 cgtagcgcca ttcctcgcac gagcgtagca acctgaggaa gctggtccaa tagatatgta
      601 cccagcgtgg ggagcgcatt aagggagaga tccagcaggt gagttgcctc cgcggtgtcg
      661 ccgatggcca ggtgcaaccg ggcctcatgg taggtgccgt cgaacgcaac atcccccggg
      721 tgggtatttc gccgtatctc tcgaagctcg tcgaagtctc ttcgtagagc agtagtgtca
      781 ccccgggcga gctcccactg catttccagc cggtaatttc cccccgcctt ggcccggtgc
      841 atcggtcgga tgcctcgctc cggaaacgcg aggaccgcgg gcagatcgag catcgcttgg
      901 cgggcgcggg accgcatccc cggctcgacg tagctcggaa tcaggcgctc gactctctgc
      961 tcgagtgcca ccagactgtc ggtcggcgta ccgaaggcag aataggcgaa gagtcccagt
     1021 gccgcgtccg cgagctgaag cggtacgttg acctcttccc aggcagacgt caggaaggtg
     1081 acctcgggtg ctgcgcgccg ctgcagctga gccgccagat ggacatggcc ggtcagggcg
     1141 gccaacccgc gcagctgtcg ggcatcgtcg agcgtcggct tgggatgggc ccgaaggacc
     1201 gaatccgcca atgcccgggc cgcagccatc tgctccgtct tcaccaggaa ccgggtctcc
     1261 atgttggcca gccggagcgc ctgccccggt gcggtcgcca ttgcccgcgc tcgccggacc
     1321 tcactcagag cggaaaggtc cttggaccgt ccggcggtca gctcacccaa tgtctccagc
     1381 accatggcca tcgtctcgtg ggcatcggcg cggttcggaa aggctcggag ccaggtggtg
     1441 gcaatctcgc gcatgagctc gcggttgtgc gacactgccg cattcaccgt cgccgggatg
     1501 gcgcccggct ccgccgcgac cacgtcggtc atagggcggg gcaggaactc gagcgtgtcc
     1561 cgagtcatcg aggggaacgc tccaaagcgg acagtatcgg gcgtcagcgc atatccctta
     1621 cgtatctgat tgggctcggt gtagagcagg tcgggaagcc gatggaatgt ctctccccga
     1681 aacgccaggt gggcggaggg cacgagctcg agcgcgcgac ggtaggcgtt caccgcggcg
     1741 tggtagctcc cgcggaagct ccagcctgcg ccggttgagt cgcgcacgac gagcgggtct
     1801 ttgccatggc aatcgcccaa tccgaaccac gccgcaaaat cgagcgagtc ccgcgcgatg
     1861 aggtcgcgaa acttttcgca ggcctgggga aaacgctgct ccgccagcgc caacatggct
     1921 tcgccgagct catggtcccg cgggcccaga ctgtccgacg aggccagtgc accagctgca
     1981 tattgcttcc acgactccgg ttcctcgccg gcccaggccg aaacctgcgc cagccacagc
     2041 tgcgccatgc catatgtcgg atcgatcgcg agcgcctgcc tcagtttggc cttggccgaa
     2101 tcgagatccc accgctgtag tgctgcatac ccgtcctgaa acgcgtgcca cgcagggagt
     2161 gacaatcgcc cgccaccccg tggcggaact ccccccacca ggccgccccc gatcagcagt
     2221 gagtcggcca gttcctggaa gcgagcctgg gcatcactca agtccgatga gatccggacc
     2281 gactgttctc tgacgagtcg cttgccggat gcatcgtaca agagcccccg cacatagatg
     2341 gtatcctgga actgccatac ctcacccagg actactctgc cggctcgccg ctcccgagca
     2401 atcgccacgc catcttcgat gctcgaggtg cttccgtgcc gtgaacgggc atctgcgacc
     2461 cacagcggat ccaccatctg gaccccgcgc cagcgggcaa gcgcatcgtg cagcaacgac
     2521 tcgcactggt caccgttgag aagcagcggt gccgattggg cccgatgccg gaagggcagc
     2581 accatgtaga gcgaggcatc cagcgtcggt gcggtccgct tgctgaacgc ggtcgcgatg
     2641 agcgcgcctg ccagggtgag ggcaccgatg aatgcccagg tagctcgcga gatgtgtcgg
     2701 gactgccagg ccggtctcgt ggtcttcagc ggggtcgtgg gcgtctgcgg cgtagggtac
     2761 cgaggcagcg cggcggcaaa ctcggccgcg ttggcaaatc gatcggccgg cagcttgtac
     2821 agagctttcg tgaccgcctg ctccacctgg gcgggcactc cagggcgtct ctcgctgagc
     2881 ggctgaggag actcctgggc gtgcttgctg atcacggctt gcggggtcgg gccgacgaag
     2941 ggtggctctc ccgccagcat ctcgtagagc acgcacccga ggctgtagat gtcggctctg
     3001 ccgtcgagat ggcgatgtcc ggcggcctgc tccgggctca tatacaatgg ggtgccgagc
     3061 gcgaagccca ctccggtcat ccgctcatcg gtggaggcca cgattgcagt gatcgcgcgg
     3121 gcgatgccga aatcggccac cattgcgtgg ccttcggcga gaagaatgtt ttccggcttg
     3181 atgtcgcgat gaacgatgcc ctggccgtgg gcataggcga gagcgttggc gacttcggag
     3241 gcgatcccta cggcatcctc gaccggaagc tgcccctcgc ggaccagccg gttgcgcagt
     3301 gattccccga ctacgtaggg catcacataa tagagaaacc cctcggcttc cccggaatcg
     3361 aagaccggga ctatatgggg atgggcgaac tgcgccgcaa tttcaatttc ctggaggaac
     3421 cggtccggtc ccaacgcggt ggtgagctcc ggtctgagca ccttcagcgc gacccgccgg
     3481 tggtgcttca ggtctcgggc gaggtagacc gtggccatgc caccccggcc gagctcgcgc
     3541 tcgatcgcgt agtgggatgc cagggcggca gtcagccgcg acaggacgtc ggtcaagggg
     3601 acctacccag aggctccagc taatgacggc cggagattct actatacggg ttgggaaggc
     3661 gattggctat tagctattgg ctg
//
LOCUS       DASYRV010000392         2008 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2989825, whole genome shotgun sequence.
ACCESSION   DASYRV010000392 DASYRV010000000
VERSION     DASYRV010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2989825"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..631
                     /locus_tag="VGQ24_10520"
     CDS             <1..631
                     /locus_tag="VGQ24_10520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEV8455318.1"
                     /translation="KLIVGLLEPDAGRVLVDDATVHELDREELAALRGRIGYVFQFAA
                     LFDSMTVAENIRLGLARRGYDKADVGLRIEESLAVVDLSGTGDKYPAELSGGMRKRVG
                     IARAIALKPRYILYDEPTTGLDPITAAVMDQLIMRTRDLGVTGLVVTHDMRSAFTVGD
                     RVAMLHDGTIRQVGSVDQIQASHDPVVRQFIEGRPSPTIVEPAVRRSAG"
     gene            628..1635
                     /locus_tag="VGQ24_10525"
     CDS             628..1635
                     /locus_tag="VGQ24_10525"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEV8455319.1"
                     /translation="MRRSNEFAVGLAVLAALALVIGGALWLSETDVNQKKISYSARFR
                     TVGGLGVGGPVTLRGVRVGRVEAIRLVEDEWVETDFSIDRSVELPRKPAVISASASLF
                     GEWVANIVPYEPLPVDPNLRNALIESDHAGGEAWPGATLPDIGQLTAQASRIAGDVGD
                     ITQRIGQAFDSTALKHLQQSVKDLAAISGRLASFASSQTDRMDRVGRNVARTSDAFAG
                     VAKTFQGAVSRLDTATSDNQLADILNNSRSSSTDIRQAAADLRSVMAAARANEASLVR
                     VLQAADSLMSRIQAGNGSLGMLATDSTLYRETTRTVIQFRELLADIQAHPKKYLKISV
                     F"
     gene            1635..>2008
                     /locus_tag="VGQ24_10530"
     CDS             1635..>2008
                     /locus_tag="VGQ24_10530"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEV8455320.1"
                     /translation="MSKRRAELEVSAGGIVFRRVPGEGAKYLLIRDSYNNWGFPKGHL
                     EGNESPAETALRETAEETGLSRLVLQGPIRVIDWHFRFRGRHIHKYCHFFLFESPEGE
                     PCPQVDEGITACQWRPLGEALD"
BASE COUNT          359 a          643 c          675 g          331 t
ORIGIN      
        1 gaagctcatt gtagggctgc tcgagcccga cgccggcagg gtcctggtgg atgatgccac
       61 cgtccacgag ctggaccggg aggagctcgc tgccctccgc gggcggatcg ggtatgtctt
      121 tcagttcgcg gcgcttttcg actcgatgac tgtggccgag aacatccggc tgggtctggc
      181 gagacgaggc tacgataaag ccgatgtcgg gctgcggatc gaggagagcc tggcggtcgt
      241 ggacctgagc ggcacggggg acaagtaccc cgcagagctc tcgggcggca tgcgaaagcg
      301 ggtcggtata gcgcgagcga ttgcgctcaa gcctcgctac attctctatg acgaaccaac
      361 taccggcctg gatcccatca ctgcggcggt gatggaccaa ctcatcatgc gcacccgcga
      421 tctcggcgtc accgggctcg tggttaccca cgacatgcgc agcgccttca ccgtaggcga
      481 tcgcgtagcc atgctgcacg acgggaccat ccgtcaggtc ggcagcgtgg accagatcca
      541 ggcgtcccac gatccggtgg tacggcagtt catcgaaggc cggcccagtc cgacgatagt
      601 cgagccggcg gtacggaggt cggcagggtg aggcgcagca atgaattcgc cgttggcttg
      661 gcggtgcttg ccgcactggc gctggtgatc gggggcgcgc tctggttgag cgagaccgac
      721 gtgaaccaga agaagatctc ctactcggcc cgcttccgca ccgtcggtgg cctcggggtc
      781 ggagggccgg tcactctgcg cggcgtgcga gtcggccggg tggaggcgat ccgcctggtg
      841 gaggatgaat gggtcgagac cgatttcagc atcgatcggt cggtcgagct gccccgcaag
      901 ccggccgtga tctctgcatc ggccagcctc ttcggcgaat gggtggccaa tatcgtaccc
      961 tacgagccgc tgccggtgga tcccaacctg cggaacgcgc tgatcgagtc cgaccacgcg
     1021 ggtggagagg cgtggccagg cgccaccctg ccggacatcg ggcagctgac cgctcaagcc
     1081 agccgcatcg ccggagacgt cggtgacatt acccagcgga tcggacaagc gttcgacagc
     1141 acggcgctca agcatttgca gcaaagcgtc aaggacctcg ctgccatctc gggccggctg
     1201 gcaagcttcg ccagctcgca gaccgaccga atggatcggg tgggtcggaa cgttgccagg
     1261 acctccgacg cattcgccgg cgtggccaag acattccagg gagccgtctc gcgtctggat
     1321 accgcgacga gcgacaatca gctggcggac attctgaaca actcccgcag ctccagcacc
     1381 gacatccggc aagccgccgc cgacctccgc tcggtgatgg cagccgcccg cgccaacgag
     1441 gccagcctgg ttcgcgtgct acaggccgcc gactcgctga tgagccggat ccaggccggc
     1501 aatggctcgc tcgggatgct ggcgaccgac tcgaccctct accgggagac cacgcggacc
     1561 gtcattcaat tccgggagct cctggccgat atccaggccc atcccaagaa gtacctcaag
     1621 atctccgttt tctgatgagc aagcgtcgcg ccgagctgga ggtgagcgcc ggaggaatcg
     1681 tcttccgccg ggtgccgggc gagggcgcga agtatttgct gattcgcgac tcgtacaaca
     1741 actggggctt ccccaagggc cacctcgagg gcaacgagtc tcccgcggag acggcgctgc
     1801 gtgagacagc cgaggagacc gggctgagcc gtctggtact ccagggtccg atccgggtca
     1861 tcgactggca cttccgcttc cgcggccggc acatccacaa atactgtcac ttcttcctct
     1921 tcgagagtcc ggaaggcgag ccctgtcccc aggtggacga ggggatcacc gcgtgccaat
     1981 ggcggccgtt gggagaggcg ctcgacat
//
LOCUS       DASYRV010000393         7044 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1951690, whole genome shotgun sequence.
ACCESSION   DASYRV010000393 DASYRV010000000
VERSION     DASYRV010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7044
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1951690"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..848)
                     /gene="mraY"
                     /locus_tag="VGQ24_10535"
     CDS             complement(<1..848)
                     /gene="mraY"
                     /locus_tag="VGQ24_10535"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEV8455321.1"
                     /translation="MFYHWLAPLGKTYIIFNLFNYISFRAAGATVTALILAFLVGPPV
                     IRHLRARKVGQVVRAEGPASHQIKRGTPTMGGLIILLATIVPTLLWAPVTNRFVVVAM
                     LSTLWMGCIGFLDDYLKIVQGKSRGLVARWKLAGQCSFGLLLGLFLAFNPVVPTDTIP
                     ATATTLPFFKYLVINFAPWFFVVFVTVVITGSSNAVNLTDGLDGLATGLAGIAAAAFA
                     VFAYLFGRVDVTSYLNVFYLPGAGELAVFCAALMGATIGFLWFNAHPAEVFMGDTGSL
                     AIGGALG"
     gene            complement(855..2267)
                     /gene="murF"
                     /locus_tag="VGQ24_10540"
     CDS             complement(855..2267)
                     /gene="murF"
                     /locus_tag="VGQ24_10540"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR01143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEV8455322.1"
                     /translation="MSGEREVVSTPPWSESAVRDALGLAPVGGREPMMFSTISTDSRA
                     IQAGGLFVALKGERFDGHDHLSAAASAGATGAVVQRGTPAVPGLLLYEVDETLRAFGM
                     LARARRMRMDGLVVAVTGTNGKTSTKEMLRAVLSTRYQTYATRANLNNLIGVPLTVLE
                     APAETEALIVEAGANLPGEISRYREIIEPSITIVTNAVAGHLEGFGSLAGVVAEKLAL
                     TDGVPLAILGVDPPALAAGARTRAREVRTAALRDAELTPTKVSLDDSARPVITFGPTS
                     FTLAARGWHQADNAVRVWALVEALGLDREASAAALERFSLPGGRGELLQEGGLTILND
                     CYNANPQSFRAAIATARALRGDRRLVFVAGTMRELGEDAPALHREIAEALVDLHPELI
                     AAVGDFVPALEPYAGALRHRLVTAPDPLALAPLLTERLRGDEIVVLKASRGVALERIL
                     PALKARAKHPGAPGAPLRQR"
     gene            complement(2264..3724)
                     /locus_tag="VGQ24_10545"
     CDS             complement(2264..3724)
                     /locus_tag="VGQ24_10545"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: protein motif:HMM:NF001124.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEV8455323.1"
                     /translation="MPLTWTAVLEELRRADLLSSGPTAAPDPAGIGADSRTIEPGMLY
                     IAVRGTQADGHRFVGQAVSRGASAIVVETPQQSGVPEIVVRDSRSSALALGAAWYGHP
                     GRCLSLIGVTGTNGKTTTTGLIRHLFNEQHEAGSIGTLGAFDGGGEPVSSSAGSLTTP
                     GPIDLQATLAAMVQRGVTHVAMEASSHSLDQGRLDGLTFAAGVFTNLTRDHLDYHGTM
                     EAYLSAKLRLSALLRLGGLEVVNLDEDAWYVMSTRTPRLTFGVHPAADVRATDIVLDA
                     AGSRFHMSGRFGPADVSLPLLGDFNVANALAAAATALGLGRPLAHVVERLAGAPQVPG
                     RMERIAETPCIVLRDYAHTPDALERALTSLRPLTSGRLIVVFGCGGDRDKGKRPVMGR
                     IAAELSDLAIATSDNPRTEDPGAIIDDIEQGMGGMPHLRIPDRLAAIHAALNQAHSGD
                     TVLLAGKGHETYQVIGTEKLPFDEREIVQKAVRGKE"
     gene            complement(3744..5708)
                     /locus_tag="VGQ24_10550"
     CDS             complement(3744..5708)
                     /locus_tag="VGQ24_10550"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HEV8455324.1"
                     /translation="MAKALARIAAVQFGFALGVAAIVARSAQLQLIQGDRWAEQAQRQ
                     RTERVVLPARRGALYDRNGVPLAVSQEFYHIGIAPNELANPRSTGQLLSRQLGVSWPT
                     LQRDLRSKRWIYYHGPFTATQVQRIRRLDGIHLTRDFQRFYPSRTLARPIIGGLSPDG
                     PAGAAGLELSLDSILTGQPGEAVLLKDRAGRRYDSPARVIREPVPGNDVVLTIDAELQ
                     EIAERGLEEALRAMKAAGGDIVFLDPTNGQLLALASSQSESRRAGVPRASTFTDPFEP
                     GSTAKLFTAAALLLHRRVDSNDAVFAEGGSWRMPITSSGRVRIISDAHKTAGNLTLAR
                     TIQVSSNVGMAKFSSRLSPEEQFEMLRDFGFGTLTGAEVPSESRGRLARPDKWQPKYT
                     RASMAMGYEFGVTPVQLAAAYGAIANDGLLLTPTLVREIRSPSGDVLYRHEPEPVRRV
                     VTPEIAAQLRDFLKGAVGEGGTGEEAQLVNYSLLGKTGTAVRFEGGRYIRGEYTASFA
                     ALFPADHPQLVVIVKIDNPQGNYYGGLTAAPVTRTMLQQALASRRVAIDRSRLTGHDN
                     GSRGVPGPAANPVSQARIVLSWPYDSAEVKVKFLPVPEVAGQSVREAALALHRRGFRV
                     NLRGLGRVSRTAPPGGELALPGAAVTVWAE"
     gene            complement(5708..6013)
                     /locus_tag="VGQ24_10555"
     CDS             complement(5708..6013)
                     /locus_tag="VGQ24_10555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455325.1"
                     /translation="MRLKGRHWMILWLLIFLGGALAVVARQTAAFRTARRLHDLREER
                     SNLEARRADLERRIRVASSRQVLVPVAERSLGLHEPADSEFVLFVVPAPAAAGQGRP"
     gene            complement(6003..>7044)
                     /gene="rsmH"
                     /locus_tag="VGQ24_10560"
     CDS             complement(6003..>7044)
                     /gene="rsmH"
                     /locus_tag="VGQ24_10560"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: protein motif:HMM:NF013919.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEV8455326.1"
                     /translation="ECRTVTAEVAGSSPVSPARFLNDHPVLADGVLCFSPSKPDMADP
                     TSIYHLPVLLPAIVAAARGARRAVDATLGDGGHAAALLEAGAEVLGIDRDPEAIATSR
                     RRLGQERIHYLHAPYASAEALAAVARFQPDFILLDLGVSSRQLDEAARGFTFRPGAAL
                     DMRMGATGESAADLLNHADLETLETIFRDYGDERRARRLAAEIVRRRARHGFATSDDL
                     VNAVRATLGAKAGPSDFARLFQAVRIAVNDELGGLERALPAFRDALEPGGRLSILTYH
                     SGEDRLVKQSYRDWARRCVCPPGFPVCICRGRAFGRVEPRKPITPEESELAMNPRARS
                     AKLRTFVVEHAA"
BASE COUNT         1214 a         2388 c         2330 g         1112 t
ORIGIN      
        1 cccagcgcac ccccgatggc gaggctaccg gtgtctccca tgaagacttc ggctggatgc
       61 gcgttgaacc agaggaaccc gatcgtggcg cccatcaggg ccgcacagaa cacggccagc
      121 tctcccgccc cgggaaggta gaacacgttg aggtagctcg tcacgtcaac ccggccgaac
      181 agataggcga acaccgcgaa cgccgcggcc gcaatcccgg ctaacccggt tgccagcccg
      241 tcgaggccgt cggtcaggtt cacggcgttg ctgctcccgg tgataaccac ggtcacgaac
      301 accacgaaga accagggtgc gaagttgatg accaggtact tgaagaacgg aagggtggtg
      361 gcggtggcgg gaatcgtatc cgtcggcacg accgggttga acgcgaggaa gaggcccagc
      421 aacaggccga agctgcactg ccccgccagc ttccatctcg ctaccaagcc gcgggatttc
      481 ccctgcacaa tcttgagata gtcgtcgagg aatccgatgc agcccatcca gagcgtggac
      541 agcatcgcca cgacgacgaa tcgatttgtc accggcgccc acaagagcgt cgggacaatc
      601 gttgcaagca ggatgatcag cccgcccatg gtcggcgtgc cgcgcttgat ctggtgactt
      661 gccgggccct ctgcccgaac cacctgcccc actttccgtg cccgcaggtg ccgtatgacg
      721 ggagggccca ccaggaacgc cagaatgagc gcggtgaccg tcgcgcccgc ggctcgaaag
      781 ctgatgtagt tgaagagatt gaaaatgatg tacgtcttgc cgagcggcgc gagccagtga
      841 tagaacatca gtcctcagcg ttggcggagc ggcgcaccgg gcgcaccggg gtgcttcgcg
      901 cgggctttga gcgcgggaag tatacgctcc aaggccaccc cacgggatgc cttcagcacg
      961 acgatctcgt ccccccgaag ccgctcggtc aatagtggcg ccagcgcgag cgggtcagga
     1021 gcggtgacca gccgatggcg taaggccccg gcatacggct cgagggcggg aacaaagtct
     1081 cccaccgcgg cgatgagctc agggtggagg tcgacgagtg cctccgcgat ctcccggtgc
     1141 agtgccgggg cgtcctcgcc cagctcgcgc atcgtgccgg caacgaagac cagccggcgg
     1201 tcgcccctga gcgcgcgggc cgtcgcgatc gccgcgcgaa aggactgcgg gttggcgttg
     1261 taacagtcgt tcaggatcgt caggccgcct tcctggagca gctcgccgcg gccgcctgga
     1321 agcgagaacc gctccagtgc cgccgccgat gcctcacggt cgagcccgag cgcttcgacc
     1381 agcgcccaca cgcgaaccgc gttgtcggcc tggtgccatc cacgcgcggc cagcgtaaag
     1441 ctggttgggc cgaaggtgat caccggtcgc gccgagtcgt cgaggctcac cttcgtgggc
     1501 gtcagctcgg cgtcgcgaag tgcggccgtg cgtacctcgc gggcgcgggt cctggcgccg
     1561 gccgcgagcg cgggcgggtc tacccccagg atggccagcg gcacgccatc ggtgagcgcc
     1621 agcttttcgg ccaccactcc ggccagcgat ccaaatccct ccaggtgccc tgccacggca
     1681 ttggttacga tggtgatgga aggctcgatg atctcacgat agcgtgagat ctcgcccggg
     1741 aggttggccc cggcttcaac gatcagagcc tccgtttcgg ctggagcttc cagaacagtg
     1801 agtggcacgc cgatcaggtt gttgagattg gcgcgagtgg cgtaggtctg atagcgcgtg
     1861 ctgagcactg cccggagcat ctctttggtg ctggtcttcc cattggtgcc cgtcaccgcc
     1921 accacgagac catccatccg cattctacgg gctcgcgcca gcattccgaa cgcgcgcagg
     1981 gtctcatcca cctcgtacag caagaggccg gggacggctg gagtgcccct ttgcaccact
     2041 gcccccgtcg ccccggcaga ggcagcggcc gagagatgat cgtgcccatc gaatcgctca
     2101 cccttgagcg ccacgaagag cccgccggcc tgaatggctc ggctgtccgt ggaaatcgtg
     2161 gagaacatca tcggctcgcg gcccccgacc ggcgcgaggc ccagtgcatc ccgcaccgca
     2221 ctctcggacc aaggcggtgt cgacaccacc tcccgctcac cgctcactcc ttacctctta
     2281 ccgctttttg tacgatctcg cgctcatcga acggcagctt ttccgttccg atcacctggt
     2341 aggtctcgtg acccttgccc gcgagaagaa cagtgtcccc gctgtgcgcc tggttcagcg
     2401 cggcgtggat cgcggcaagt cggtccggga ttcgaagatg cggcatgcca cccatgccct
     2461 gctcgatatc atcgatgatc gcaccagggt cttccgtccg ggggttatcc gaggtcgcga
     2521 tcgccagatc cgagagctcc gccgcgatgc gtcccatgac cggccgcttg cccttgtcgc
     2581 ggtctccgcc gcatccgaac accacgatga gccgcccgct cgtgaggggg cgtaaactcg
     2641 tgagcgcgcg ctccagcgcg tctggggtgt gtgcgtagtc ccgcagcacg atgcagggag
     2701 tctcggcgat gcgctccatg cggcccggca cctgaggtgc accagccaga cgctcgacga
     2761 cgtgggcgag cggacggccg agcccgaggg ccgtcgcagc ggccgccagg gcgttggcca
     2821 cgttgaagtc gcccaggagt ggaagcgaga cgtcagccgg gccgaagcgt ccactcatgt
     2881 gaaaccgcga cccagccgcg tcgaggacga tatcggtcgc ccgcacgtcc gcggcgggat
     2941 gtacgccgaa ggtgaggcgt ggcgtgcggg tcgacattac gtaccatgca tcctcatcga
     3001 ggtttaccac ctccaacccg cccaaccgga ggagtgcgct caggcggagc ttggccgata
     3061 ggtacgcctc catggtccca tggtagtcga ggtggtcacg ggtaaggttg gtaaacacac
     3121 cagccgcgaa ggtcaatccg tccaggcgcc cctgatccag actgtgggag gacgcttcca
     3181 tggccacgtg ggtcacccca cgctgcacca tggccgcgag cgtcgcctga agatcgatgg
     3241 gccccggagt cgtcagcgac cctgcactcg agctgaccgg ctcgcccccg ccatcgaatg
     3301 cgccgagggt tccgatgctg ccggcctcat gctgttcatt gaagagatgc cggatgagcc
     3361 ccgtcgtagt cgtcttgccg ttggtcccgg taacaccgat caggctcaga caccgacccg
     3421 ggtggccgta ccacgcggcg ccgagcgcga gcgccgagct ccggctgtcc cgcactacga
     3481 tctcgggcac gcctgactgc tgaggcgtct ccaccacgat ggcgcttgca ccccggctca
     3541 ccgcctggcc cacgaaccgg tgaccatcgg cctgggttcc ccggaccgcg atgtatagca
     3601 tcccgggctc gatcgtcctg ctatctgctc cgatacctgc ggggtcgggc gcggctgttg
     3661 ggccggagct caacaggtct gcccggcgaa gctcttcgag cacggcagtc caggtcagcg
     3721 gcatggagtg tccacgtcgt ccactactcg gcccacaccg tgacagccgc gcccggcagg
     3781 gccagctccc cacccggagg ggccgtacgg ctgaccctgc cgaggccgcg gagattcacc
     3841 cggaatccgc gccggtgaag cgcgagtgcc gcctcccgga cggactggcc cgccacctcg
     3901 gggaccggca ggaatttgac cttcacctcg gcagagtcgt agggccagga gaggacgatg
     3961 cgggcctgac tcacgggatt cgccgccggg ccgggcacac ctcgggaccc gttgtcgtgc
     4021 ccggtcagac ggctcctgtc gatcgcgacg cgacgcgatg ccagagcctg ttgcagcatc
     4081 gtacgcgtga ccggcgccgc ggtgagcccg ccgtaatagt tgccctgagg gttatcgatt
     4141 ttgacgataa caacgagctg aggatgatcg gccgggaaca gcgccgcgaa ggaggcagtg
     4201 tactcgccgc ggatatagcg ccccccctcg aaccgcaccg ccgtgccggt cttccccagc
     4261 agtgagtaat tgaccagctg cgcttcctcc ccggtgccac cttcaccgac cgcgcctttg
     4321 agaaagtcgc ggagttgggc cgcgatctcc ggcgtaacca ctcggcgtac cggctcgggc
     4381 tcatgccggt acagcacgtc gcccgatggg cttcggatct cccgaaccag ggtgggggtc
     4441 agcagcaggc cgtcgtttgc gatggcgccg tacgccgcgg ccagttgaac gggcgttacg
     4501 ccgaactcat atcccatggc catgctcgcc cgggtgtact taggctgcca cttatccggc
     4561 cgggccagcc gcccccgcga ctccgaggga acctcggccc ccgtcagcgt gccgaatccg
     4621 aaatcgcgaa gcatctcgaa ctgctcttcg ggggaaagcc gggacgagaa cttggccatg
     4681 ccgacgttgc tcgagacctg gatcgttcgc gccagcgtca ggtttccggc ggtcttgtgc
     4741 gcatcagaga tgatgcggac ccgaccgctg ctcgtgatcg gcatgcgcca ggagccgcct
     4801 tcggcaaaga cagcgtcatt actatccacc cggcggtgga gcagcagcgc cgctgcggtg
     4861 aacagcttgg ccgtggagcc gggctcgaag ggatcagtga aggtcgacgc acgggggacg
     4921 ccggcgcgac gactttcgga ttggctggac gcgagcgcga gcagctgacc gttggtgggg
     4981 tccagaaata caatgtcgcc gccggcggcc ttcatggctc tgagcgcctc ctcgaggccc
     5041 cgctccgcga tctcctgcag ctccgcgtcg atcgtgagga ctacatcgtt gcccgggaca
     5101 ggctcacgaa tcacccgggc cggcgagtcg taccggcgac ccgcacggtc cttcagtagg
     5161 accgcttcgc cgggttggcc ggtgagaatc gaatcaagtg agagctcgag tccggccgcg
     5221 ccggccggcc cgtccggcga caagccgccg atgatcgggc gggcgagcgt tctcgaaggg
     5281 taaaagcgct ggaagtcgcg ggtgaggtgg atgccgtcga gccgccggat ccgctgcacc
     5341 tgggtcgcgg tgaacggccc gtgatagtag atccatcgct tggatcgcag gtcccgctgg
     5401 agggtgggcc aggacacccc cagctgtcgg ctcaacagct gcccggtcga gcgagggttg
     5461 gccagctcgt tgggcgcgat gccgatatgg tagaactcct ggctcaccgc gagaggcacg
     5521 ccgttcctgt cgtacagagc gcctcgccgg gccggcaaca cgacccgctc ggttcgctgt
     5581 cgctgggcct gttccgccca ccggtctccc tggatcagct ggagctgggc ggagcgagct
     5641 acaatcgccg cgacaccaag cgcgaagccg aactggacgg cggcaatgcg cgccagcgcc
     5701 ttggccatca gggtctgccc tgaccggccg ccgccggggc tggcacgacg aagagtacga
     5761 actcggaatc ggccggctcg tgcaggccga gtgagcgttc ggctaccggc acgaggacct
     5821 ggcgactcga cgcgactcgg atccgacgct cgaggtcggc acgccgcgcc tccaggttgc
     5881 tccgctcctc acggagatcg tgcagtcgcc gcgcggtgcg aaaagcggcg gtttgccgtg
     5941 ccacgacggc cagcgcgcca ccgagaaaga tcagcagcca caggatcatc cagtggcggc
     6001 ctttaagccg catgctccac cacaaaggtc cgcagtttgg cgctcctggc tcggggattc
     6061 atcgccagct ccgactcctc gggcgtgatc ggtttgcgag gctcgacccg gccaaaggct
     6121 cgcccgcgac agatgcacac cggaaaaccc ggagggcaga cgcagcgccg ggcccagtcc
     6181 cggtacgatt gctttaccag gcgatcctcg cccgaatgat aggtaaggat cgacagacgg
     6241 ccaccgggct cgagcgcatc tctgaacgcc ggcaaggcgc gctcgagccc tcccaattca
     6301 tcgtttaccg cgatgcgcac ggcctgaaag agccgggcaa aatcggaagg cccggctttg
     6361 gccccgagcg ttgcccggac ggcgttcacg agatcatcgc tggtggcaaa tccgtgccgt
     6421 gcccggcggc gcacgatttc cgctgccagt cggcgagccc gccgctcgtc gccgtagtcc
     6481 cggaaaatgg tctcgagcgt ttccaggtcg gcatgattga gtagatccgc agctgattct
     6541 ccggtggccc ccatgcgcat atccagcgcc gcgcccggac ggaaggtaaa accacgtgcg
     6601 gcctcgtcca gttgccgaga cgagacgccc agatccagca gaatgaaatc gggctggaac
     6661 cgggcgaccg cggcaagcgc ttcggccgag gcgtagggcg catggagata gtggatccgc
     6721 tcctgtccca acctcctccg gctggtcgcg atggcctcgg ggtcccggtc gatcccgagg
     6781 acctccgccc cggcctcgag cagcgccgcg gcgtggccgc catcgcccag cgtggcgtcg
     6841 acggcccgac gcgccccgcg cgctgccgca acgatcgcgg gcaagaggac cggcaggtga
     6901 tagatcgagg tcgggtcggc catgtccggc tttgaggggc tgaaacacaa caccccgtcc
     6961 gcgaggacgg ggtgatcatt caagaagcga gcggggctga cggggctcga acccgcgacc
     7021 tccgcagtga cagtgcggca ctct
//
LOCUS       DASYRV010000394         3786 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3820548, whole genome shotgun sequence.
ACCESSION   DASYRV010000394 DASYRV010000000
VERSION     DASYRV010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3786
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3820548"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..681
                     /locus_tag="VGQ24_10565"
     CDS             <1..681
                     /locus_tag="VGQ24_10565"
                     /inference="COORDINATES: protein motif:HMM:NF017013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOFRL family protein"
                     /protein_id="HEV8455327.1"
                     /translation="AEVREQLQRADLWSQLPESARGLVASAEAGKTAETPKPGDQAFA
                     RVTLELIVSNRLALEAAARRAAELGLTPEVVETPIAGEASATGASVAAKLLNNCARKS
                     IPQPSCTIWGGETTVTLGQGPTGLGGRSQELALAAARVLEGAPEGTALLAAGTDGRDG
                     PTDAAGAIVDGSTWSAIVRSGRDPVHDLATHDAYYALDAAGVLLRPGLTGTNVMDVVI
                     GVCGLEKA"
     gene            complement(860..1231)
                     /locus_tag="VGQ24_10570"
     CDS             complement(860..1231)
                     /locus_tag="VGQ24_10570"
                     /inference="COORDINATES: protein motif:HMM:NF024791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LytR C-terminal domain-containing protein"
                     /protein_id="HEV8455328.1"
                     /translation="MLAAGLALFRPRPEPRPAQAFVVPSPHGRVLVEVLNGSRRQGAA
                     RTATRMLRRQGLDVVFLGNADSIADSTRVIVRRGDPNNARYVAQALGAGKVMVETDTF
                     RRVDVSVILGDDFRPRLAIHP"
     gene            complement(1231..1827)
                     /locus_tag="VGQ24_10575"
     CDS             complement(1231..1827)
                     /locus_tag="VGQ24_10575"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEV8455329.1"
                     /translation="MTLRRTPPGLRPTLPHWAVVIPERVEHIQRVAELAAGWAERMGV
                     PDSERNRWLRAVWLHDALRDASLAELDKWAAGIAWPAELRHGPASAAHAKAEGETDRG
                     VLDAVRYHSLGLAEWDMVGRMLYCADYLDPGRGFDETQRAELAERLPDDPGGVLREVA
                     RSRLTHIIQSGWPVLEPTIRFWNSLAAAGASSHSLPPS"
     gene            complement(1824..2678)
                     /gene="panC"
                     /locus_tag="VGQ24_10580"
     CDS             complement(1824..2678)
                     /gene="panC"
                     /locus_tag="VGQ24_10580"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEV8455330.1"
                     /translation="MDEISTIPALRAWTHAQRAAGRRIGFVPTMGYLHEGHLALVDVA
                     RRRADAVIMSIFVNPLQFGPGEDLARYPRDLPLDRALASGRGVDALFIPAVDLMYPPG
                     SEVRVVPGASGERWEGAARPVHFAGVLTVVAKLFHLVAPDFACFGRKDIQQLTLVRQM
                     VRDLDWPIEIVAVPTVREPDGLAMSSRNAYLGPEDRRRAVALSRALQAAHTAWKNGET
                     RAAALEERMRLELRREPEVSVEYIAIAEPEALAPVATVDAGTIVAIAAPIGGTRLIDN
                     ITLGEGTG"
     gene            complement(2755..3567)
                     /gene="panB"
                     /locus_tag="VGQ24_10585"
     CDS             complement(2755..3567)
                     /gene="panB"
                     /locus_tag="VGQ24_10585"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: protein motif:HMM:NF001452.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEV8455331.1"
                     /translation="MNADPRPLTVTDLLTMKVASRRIVVLTCYDAVFARLLEQAGVDV
                     LLVGDSLNQVLAGHETTLSATLDQMIYHAAAVRRGSSHALVFVDLPFLTYQISIPEAI
                     RNAGRVLQETGAHGVKLEGGSHMAETVAALVDRGIPVIGHLGLTPQSVHALGGYRVQG
                     REEKEADRMLQDAKALEAAGACAIVLELIPAPLAARISKSLTIPTIGIGAGPGCDGQV
                     LVLHDMLGLNEQFAPKFLKHYAKLGEAVRDAVRSFAADVRDGKYPGKEHSFE"
     gene            complement(3557..>3786)
                     /gene="folK"
                     /locus_tag="VGQ24_10590"
     CDS             complement(3557..>3786)
                     /gene="folK"
                     /locus_tag="VGQ24_10590"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEV8455332.1"
                     /translation="ETRLEPRALLQACQTIERREGRQRSERWGARTLDLDIVRFGNRQ
                     VKESDLIIPHPELPNRDFWRRELAELSPDER"
BASE COUNT          647 a         1253 c         1253 g          633 t
ORIGIN      
        1 gccgaagtgc gggaacagct ccagcgtgcc gatctctggt cccaactgcc ggaatcggct
       61 cgaggtctgg tggcgtcggc ggaagcgggg aaaactgccg agacgccgaa gcctggggac
      121 caggcttttg cgcgggtgac cctcgagctg attgtcagta ataggttggc cctcgaagct
      181 gcggccagac gtgcggctga gttgggcctc actccggaag tggtcgagac accgatcgcc
      241 ggggaggcgt cggccaccgg tgcgagtgta gccgccaagc ttctcaataa ttgcgctcgg
      301 aaatcgatac cgcaaccgag ctgcaccatc tgggggggcg agacgaccgt cactctgggt
      361 cagggcccga ccgggttggg agggcggtcc caggagctgg cgctcgccgc ggcccgggtg
      421 ctggaaggcg ctcccgaggg gacggcattg ctggcggccg gtactgacgg tcgagatggc
      481 cccacggacg cggcgggcgc gatcgtggac ggtagcacct ggtccgcgat cgtgaggtcc
      541 ggccgagacc ctgttcacga cctggccact catgatgcct actacgcgct cgatgcggcg
      601 ggcgtgctgc tccggcccgg cctcacggga accaatgtga tggatgtggt aattggggtg
      661 tgcgggttag aaaaagcgtg agcgggaacc atctaaggct cctcatcccg agcgaagcga
      721 ggaacctggg ccgctcgttt cgggcccgcg gcggcctttc ctggggccag ctgagcagat
      781 ccctcactac ggtcgggatg agtgcagttc cccctcatcg ctcacgttgt tggtttttcc
      841 cgcttacgct ttttctggtc tacggatgaa tcgccaatcg gggcctgaag tcatccccta
      901 gtatcacgct cacgtccacc cggcggaacg tatcggtctc gaccatcacc ttccccgcgc
      961 cgagtgcctg ggccacgtag cgtgcgttat tcggatctcc ccggcgcacg atgacccggg
     1021 tcgaatccgc gatcgaatcc gcgttgccca gaaacaccac gtccagtccc tggcggcgga
     1081 gcatccgagt tgccgtacga gcggccccct gccggcgact tccgttcaac acctcaacca
     1141 gcaccctgcc atggggcgaa ggaaccacga atgcctgcgc gggccgcggc tcgggtcgag
     1201 gccggaacag agcgagtccc gccgcgagca tcacgacggc ggtaacgagt gcgagcttgc
     1261 gccagcggcg gcgaggctgt tccagaatcg gattgtgggc tcgagaacgg gccatccgga
     1321 ttggattatg tgagtgaggc gggaccgggc cacctctcgg agcacgccgc ccggatcgtc
     1381 cggcaggcgc tcggccagtt ctgcccgctg cgtctcatcg aatccgcggc cggggtcaag
     1441 gtaatcggcg cagtacagca tcctgccaac catgtcccat tcggccagac caagcgagtg
     1501 ataccgcacg gcatcgagca ctccgcggtc ggtctcgccc tcggccttcg catgggcggc
     1561 gctggcggga ccatgacgca gctcggccgg ccaggcgata cccgcggccc acttgtcgag
     1621 ctcggcgaga gacgcgtccc ggagagcgtc gtggagccag actgcccgca gccaccggtt
     1681 gcgctccgag tcgggcactc ccatccgctc ggcccatccg gcagcgagct cggccactcg
     1741 ttggatatgc tccacccgct cgggaatgac cacggcccag tgggggagcg tggggcgaag
     1801 cccgggcggc gtccggcgca gcgtcaaccg gttccctctc ccagtgtaat gttgtcgatg
     1861 aggcgggtgc cgccgattgg tgcagcgatt gccacgatcg tgccggcatc gaccgtcgcc
     1921 accggagcga gtgcctcggg ctcggcgatc gcaatatact cgaccgaaac ttcgggctct
     1981 cggcgcagct ccaggcgcat tcgctcttcg agagccgcgg cccgagtctc gccatttttc
     2041 caggccgtat gtgccgcctg cagcgcacgg ctgagcgcga cagcccggcg tcgatcttct
     2101 ggtcccagat aggcgttccg gctgctcatg gcgagcccgt cgggttcccg tacggtggga
     2161 acagcgacga tctcgatcgg ccaatcgaga tcacgcacca tctgccgcac cagcgtgagc
     2221 tgctggatat ccttccggcc aaaacaggcg aaatccggcg cgaccagatg aaagagcttg
     2281 gcgaccacgg tgagcacgcc ggcgaagtgt accggccgcg ccgcgccttc ccatcgctcg
     2341 ccgctggcac cgggaacgac ccgcacttcc gaccccggcg gatacatcag atctacagcg
     2401 gggataaaga gggcgtccac gccgcggccg gaagccagtg cgcgatcgag aggcaggtct
     2461 cgagggtagc gggccaggtc ctcgccgggc ccgaattgca gcgggttcac gaagatgctc
     2521 atgattacgg catcggcccg ccgccgcgcc acatccacca gcgcaaggtg tccctcgtgc
     2581 aggtacccca tcgtcggcac gaagccgatc cgccgcccgg cagcgcgctg agcgtgggtc
     2641 caggcgcgca gggctggtat ggtggagatt tcgtccatgc tgggagctgg gagctaggag
     2701 ctaggagcta ggttccagcg acagctgaga ggctccgagc acccagctcc ccgctcactc
     2761 aaaactgtgc tccttacccg gatacttgcc gtcacgaacg tccgcggcaa agctgcgcac
     2821 cgcgtcgcgc accgcttcgc cgagcttggc ataatgcttc aggaacttcg gggcgaattg
     2881 ctcgttgagc ccgagcatat cgtgcaacac gagcacctgg ccgtcgcacc caggccctgc
     2941 gccgatcccg atcgtgggta tagtgaggga tttcgagatc cgggctgcga ggggggccgg
     3001 gatcagctcc agcacaatgg cgcaggcccc tgccgcctcg agtgccttgg cgtcctgcag
     3061 catccggtcg gcttccttct cctctcttcc ttgcacccga taaccgccca acgcgtgcac
     3121 cgactggggc gtcaacccga gatgaccgat cacggggatc ccccggtcca ccagggccgc
     3181 caccgtctcg gccatatggc tgccgccctc gagcttgacg ccatgtgcgc cggtctcctg
     3241 caagacccgc ccggcgttgc ggatcgcctc gggaatggag atctggtagg tgaggaatgg
     3301 caggtcgacg aagacgaggg cgtgactgga tccgcggcgg accgccgcgg cgtgataaat
     3361 catctggtcg agcgtggcgc tcagcgtggt ctcatgacct gccagcacct gattcagtga
     3421 atcgcccacg agaagcacat ccacgccggc ctgttcgagc aaccgcgcga acaccgcatc
     3481 ataacaggtg agcacgacga ttcgccggct ggcaaccttc atggtgagaa ggtcggtcac
     3541 cgtcaggggc cgcgggtcag cgttcatcgg gactcaattc cgccagttct cggcgccaga
     3601 agtcgcggtt gggcagctcg ggatgaggaa tgataaggtc gctttccttc acctgccgat
     3661 tgccgaaccg aacgatatcg agatccaggg ttcgggcgcc ccagcgttcg gaccgttgcc
     3721 ggccctcccg gcgctcgatc gtctggcacg cctgcagcag ggctcgaggc tccaggcggg
     3781 tctcga
//
LOCUS       DASYRV010000395         8138 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2990344, whole genome shotgun sequence.
ACCESSION   DASYRV010000395 DASYRV010000000
VERSION     DASYRV010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8138
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2990344"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(74..310)
                     /locus_tag="VGQ24_10595"
     CDS             complement(74..310)
                     /locus_tag="VGQ24_10595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455333.1"
                     /translation="MSETAAEYEARQKANRSEESGILRMQREAVARAEAERGARGRSG
                     LGFWRLVWVVALGILLAQGIAAVILAVARAVTGS"
     gene            360..2000
                     /locus_tag="VGQ24_10600"
     CDS             360..2000
                     /locus_tag="VGQ24_10600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455334.1"
                     /translation="MGEELDLKILITALLNSKGFEDAQAQLRGLGTTATGAAPAVGNL
                     GEKTKGLTKELGGSRGAVADMTRVLLMNIGVTGASGEVAKAAGLAMNMLSGSAGLVGV
                     SAAALVAALALLLPKLKEWGVTAEDIEAIHKGIAQELASELPQLKEYIEKVDSASRAI
                     REQYAAVLQLVAAQQRLEALELSHKIAEHERQYKTLMETISGSHWSWQRLIGVQDTSQ
                     QAAARWAAQAAILEAEIKQEKARLDELNEAIVNGAVADLQRADAMEKSRKAEHDAAEA
                     TRKRNQELADQLQLSRDLRAESARLQQQENKDRIESRKRREQDIQTSAERILQIEAEN
                     EARMREVIAAKLANEQITLAELKRLRESRLLTDAELKLINERIRARKAEAASIAQLWT
                     QAITTLVGAFTKNKAINIAAAIADTWAAANVALRSAPPPYNYALMAAVIAQGLANVQR
                     IREQEVGFDDPFNDMLANKLGRRSAADFLRHFGEGFEIGMSGRGGGGVTNNYHRTTIN
                     RGVNIGPISGVVGSKTELRRWLQREMTAADRAERRSSI"
     gene            2002..4284
                     /locus_tag="VGQ24_10605"
     CDS             2002..4284
                     /locus_tag="VGQ24_10605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455335.1"
                     /translation="MPNNLDFRVEILQYKPGAPGPLPAPLDVTEHAKLDGLGSINRAV
                     ERDLLSFKTGDATLKFRNVRAFFDDLFAFFGPTDRWQLRLFRRNEIQFWGILLGAGSI
                     KFDRKAREVEITAYGLTRHLQDTSAEGVQRTFAAAIYPTAGINPGNTTLTLNDTTGIL
                     PGDTLHITSETAAEDYVVKRVISAMSVEIEAGSVNGYGGGTPPANLSIITVATPYYRY
                     RGIEFLVRALFAAATIPVAEYRLSGSAFKYPAPAPVNPQGLVVNQFQGAAAQEANGRC
                     YITVNDTGTYYQVNPEDAWVLEDGTERAWVDWSRYFRQGHAQPVILLRAPTGIGGGNL
                     SEGYGDGWDFNGGAGSTPLTGYYIDELAEPEKISKKTTSDGITWGATTGVVDLPDSGT
                     KELSTQTSRGLEFDPVRNALYCWWEYDDGSRYSQYYDIAGGTFTSLLQGEDVDGSHYA
                     GFIYIPEYDYALCLRSIPSTGPVFEICAFRGTTRLWKRPFPRCLVRSESSVEGYIYPT
                     RSIRYLNGFLVGLISHDQGIQFVRTGDEFLTYRANKIVDGSINTRLHGGRVKEQYRIF
                     SYKGGNPGAGRNWMVASQQLAGVIDYADFGGKSVAEALRDLATLVNAVFWIDDEGAGH
                     FVARDLFDAGNVIDITDRIKERTDDLLWENVAQYVEVSATIGSTAIAGDKNFSSSGVS
                     LSSPFIPNAAYAQAIADSFIDFYNKKRALIETTVKDSDGRIYRPLDRVMIDGARWMVY
                     ESDHDLGAEEVSVKFLEDAA"
     gene            4284..4577
                     /locus_tag="VGQ24_10610"
     CDS             4284..4577
                     /locus_tag="VGQ24_10610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455336.1"
                     /translation="MPKINPGDPGGGGGSGSFGLPQSGITLKGDVQLIAFPGVQITVI
                     PEQNRIELRPGFSDEVQGDLMYRGVDGWQRLGAGSAGQKLQTNGPGADPSWVT"
     gene            4668..5111
                     /locus_tag="VGQ24_10615"
     CDS             4668..5111
                     /locus_tag="VGQ24_10615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455337.1"
                     /translation="MALGHGWTPKFRITPPAGNPYVVDISAYQWLVVFQPTWEPEFLF
                     SEMLDRRLTKTRYGYRGRCHILLELITPSASETELNDSVLNPSEDDDYLIELSLDGGT
                     TYREVLLEKHQDANLGDKNIGIRIDTVWVTAALAPMKPSIAAGRW"
     gene            5137..5607
                     /locus_tag="VGQ24_10620"
     CDS             5137..5607
                     /locus_tag="VGQ24_10620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455338.1"
                     /translation="MLRPAGIVSFESAAAETARTTVALNPIAGVTIQVTEIGISCNAA
                     PNSTAAPVRWAIKRTGTALPTATSQTPEKLQSDLGGTLQTAGLVNVTVEGTLVGNRLH
                     RWMVPNVSGMIWVAAPGREFDQTDGGSNVAAINLEHQDALPASVQAETYLVFEE"
     gene            5618..5902
                     /locus_tag="VGQ24_10625"
     CDS             5618..5902
                     /locus_tag="VGQ24_10625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455339.1"
                     /translation="MIACLRAARFLVPGGGGIHVELRRHHDLRSAGTGDRAVSFVVAK
                     RMTAYPRTMTLKKFGTLPEARAYWMKQVTIIEDQGFERRDPRIIGFHEED"
     gene            5903..6586
                     /locus_tag="VGQ24_10630"
     CDS             5903..6586
                     /locus_tag="VGQ24_10630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455340.1"
                     /translation="MSTVTNRIATPSTLNVSSYASGAFTPAVGDLLVAFIGKTASVND
                     GSLTDSQGGTWTLIRNAGKVASADTLQLFVRNQLIASASSMTVTYDCTGDAATGCIIQ
                     VASVAGMFRTGASAVSQNAAENNQAAGGTPAPVFAFNCQTGNPTLGAVFNATNPATMT
                     PPASWTEQNDTGYSTPGTGQEYVSRDSGFTGTTITWGSTSGTAFCDIIVELDTTTFPT
                     IDFRNSEVA"
     gene            6586..7344
                     /locus_tag="VGQ24_10635"
     CDS             6586..7344
                     /locus_tag="VGQ24_10635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455341.1"
                     /translation="MIRNTRILPRLDRSADVRPRFGPVVNPVVAAVAATAIVPFLVVT
                     SVQASPSRTVQPQFFRMVPYVPVPPVIAPRVVGFPRLQPVSVPASKFIQVPPPPVAPP
                     GSSPVISPIRGQWMGDARESRGEVRARFLPFPYFDQSLQPPKIRHTRVRAVSKMPLAG
                     SMPQAPIAVGEAKAPKAGLTGQAPQAMGEGQAALAVTGSQGPGASASIQAPRAAAAPV
                     IVRVRFASRSPRAGISGSSAHGTVGIKAPKGEGS"
     gene            7348..7890
                     /locus_tag="VGQ24_10640"
     CDS             7348..7890
                     /locus_tag="VGQ24_10640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455342.1"
                     /translation="MYTIDPLNGDLVMDRGDFVNPELRITDADGVALNVTGATFKLTV
                     KAALEDSLAAAMFQLVSPGDFDLSGAATGIVVPLILETFTQGLAGDYSYDVEMVLGGK
                     TTTLVRAALFRVLKEVSDVGVAPSPPSVLVPFPGDIQIIGGKVYITDTGIGANAGKNW
                     KLVVQDGVFDVQGPSDVVPF"
     gene            7902..>8138
                     /locus_tag="VGQ24_10645"
     CDS             7902..>8138
                     /locus_tag="VGQ24_10645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455343.1"
                     /translation="MRSWLRRSLVLWLVLFPGGLFAQGTVVGRIKTPAKIGTDYTLTN
                     PTTAPTAAISAAGGSCNTTQTWRFYTAWANLAGVT"
BASE COUNT         1601 a         2588 c         2622 g         1327 t
ORIGIN      
        1 cactcgggcg cggcatggag cgacggagca cagagggaga gaacggccag gacggagaga
       61 acgcgggcgg ccctcacgat ccggtcacag cccgggctac cgccaggata accgcggcga
      121 tcccctgcgc caggagaatc ccgagcgcca cgacccagac caggcgccag aagcccagac
      181 cggatctgcc ccgagcacct ctttccgcct ctgcgcgagc cacggcttcc cgttgcatgc
      241 gcaggatgcc cgattcctcc gacctgttcg ccttctgccg cgcctcgtat tcagcggcgg
      301 tctcgctcat gaccgcccca tatacgcccg aaccgggcct ctgtcaagtg gtctaggcca
      361 tgggtgaaga actcgacctg aagatcctga tcaccgccct cctcaacagc aaagggttcg
      421 aggatgctca ggcgcagttg cgcggacttg ggaccaccgc tacaggtgca gcgccagcgg
      481 tcgggaatct aggggagaag accaagggcc tcacgaagga gctgggtgga agccggggcg
      541 cggtcgcgga catgacccgg gtcctcctga tgaacatcgg ggtcacgggg gcgtctggag
      601 aagttgcaaa ggccgccgga ctggcgatga acatgctcag cggctccgct ggtctggtgg
      661 gtgtcagcgc cgcagccctt gtcgcagctc tcgccctgct actcccaaag ctgaaggaat
      721 ggggggtcac ggccgaggac atcgaggcca tccataaggg gatcgcccag gagctggcga
      781 gcgagctccc tcaactcaag gagtacatcg aaaaggtcga tagcgcctca cgagcgattc
      841 gagagcaata cgcggcagtc ctgcagctcg tcgccgcgca gcagcgcctt gaagccctgg
      901 agctgtcgca caaaatagcc gagcacgaac gccagtacaa gactctgatg gagacgatca
      961 gcggctccca ttggagctgg cagcgattga tcggggtaca ggatacaagc cagcaggcgg
     1021 cggcgagatg ggccgcgcag gcggcgatcc tcgaagccga gatcaaacag gagaaggcgc
     1081 gtctcgatga actgaatgag gccattgtca atggtgcggt cgccgatcta caacgcgccg
     1141 atgccatgga gaaatccagg aaagcggagc acgacgctgc agaggcaact cgcaaaagga
     1201 atcaggagct cgccgatcag ctccaattga gcagggacct aagggccgag agtgcccggc
     1261 tgcagcagca agagaataag gaccggatcg aatcaaggaa gaggcgcgag caggatattc
     1321 agacctccgc cgagcggatc ttgcaaatcg aggccgagaa cgaggcccgc atgcgcgagg
     1381 ttatcgcggc gaaattagcc aacgagcaga tcacgctcgc tgaactcaag cgtctccggg
     1441 aaagtcgcct tctcacggat gccgagctca agcttattaa cgaaagaatc cgcgccagaa
     1501 aagcggaagc agcgagcatc gcgcagctct ggacgcaggc gattacgacc ctcgttggag
     1561 cgtttaccaa aaacaaggct atcaacatag ccgccgcgat cgccgacaca tgggcagcag
     1621 ccaacgttgc cctcaggagc gccccgccgc cctacaacta tgcactcatg gcggccgtga
     1681 tcgcccaagg gctggcaaac gtacagagga ttcgcgagca ggaagtcggc tttgacgatc
     1741 ccttcaatga catgctcgcc aataagctgg gccggagaag tgcggcggat ttcctgcggc
     1801 atttcggtga agggtttgag atcggcatga gcggcagagg tggcggcggc gtcaccaaca
     1861 attaccatag gacgacgatc aaccgcgggg tgaacatagg ccccatcagt ggcgttgtcg
     1921 gttcgaagac ggaactgcgc cggtggttgc aacgggagat gaccgcggcg gaccgcgccg
     1981 agcgccggag ctcgatctga gatgccgaac aatctggact tccgggtcga gatccttcag
     2041 tacaaaccgg gcgcgccggg gccgctaccg gctcctctcg acgtcaccga gcacgcgaag
     2101 ctcgacggcc tgggctccat caaccgcgcc gtcgagcgcg acctcctatc cttcaagact
     2161 ggggatgcca cactgaagtt ccggaacgtg cgcgccttct tcgacgacct gttcgccttc
     2221 ttcggcccga ccgaccgctg gcagctccgg ctcttccgcc ggaacgagat ccagttctgg
     2281 gggatcctcc taggggcggg gtccatcaag ttcgaccgga aggcgcgcga ggtggagatt
     2341 accgcctacg gcctgaccag gcacctccag gacacgagcg ccgagggcgt gcagcgcacc
     2401 ttcgctgccg cgatctaccc gaccgccggg atcaacccag ggaacaccac gctgacgctg
     2461 aacgatacga ccggcatctt gcccggggac acgctgcaca taacctcgga gacggccgcc
     2521 gaggactacg tggtcaagcg ggtgatctcg gcgatgtcgg tcgagatcga ggccggctcc
     2581 gtgaacgggt acgggggcgg cacccctccg gcgaacctga gcatcatcac cgtggccacg
     2641 ccctactacc gctaccgggg gatcgagttc ctggtgcggg cgcttttcgc cgcggcgacc
     2701 atcccggtgg ccgagtaccg cctgtccggg agcgccttca agtaccccgc gcccgcgccc
     2761 gtgaatccgc aggggctcgt ggtcaatcag ttccaggggg cggcagccca agaagcgaat
     2821 ggccgttgct acatcacggt caacgatacg ggtacctatt atcaggtgaa ccccgaagat
     2881 gcatgggtac tcgaggatgg gactgaacgc gcctgggtag attggtcgcg ctacttccga
     2941 caaggacatg cacagcccgt gatcctgttg cgagcgccaa cgggcatcgg aggcggcaat
     3001 ctctctgagg gttatggtga cggctgggat ttcaatggag gcgcgggatc gacccctctt
     3061 acaggttact acattgatga actggccgag cccgagaaga tttcgaaaaa gaccacgagt
     3121 gacgggatca cttggggtgc gacgaccgga gtcgttgatc ttcccgattc aggcacgaag
     3181 gaactgagca cccagacttc gcgtggcctt gagttcgacc cggtccgaaa cgcgctctat
     3241 tgctggtggg agtacgacga cggaagtcgg tattcgcagt actacgacat cgcgggcggc
     3301 accttcacgt cgctcctgca gggcgaggac gtcgatggca gccactacgc cggattcatc
     3361 tacatcccgg agtacgacta tgccctctgc ctgcgctcca tcccctcgac aggaccggtg
     3421 tttgaaatct gcgccttccg ggggaccacg cgcctctgga agcgcccctt tccgcgctgc
     3481 ttggtccgga gcgaaagctc cgtcgagggc tacatttatc cgacacgctc gattcgctat
     3541 ctgaacggct tcctggtggg cctcatcagc catgaccaag gcatccagtt cgtccgaacg
     3601 ggcgatgaat tcctgaccta tcgggccaac aagatcgtcg atggctcgat caacacccgc
     3661 ctccatgggg gccgggtgaa ggagcagtac cggatcttca gctataaggg cggcaacccg
     3721 ggcgctggcc ggaactggat ggtggcctcc cagcagctcg ccggcgtcat cgactatgcc
     3781 gacttcggcg gcaagagcgt ggccgaggcg ctccgggatc tggccaccct tgtcaacgcc
     3841 gtgttctgga tcgatgacga gggggccggg cacttcgtag cgcgcgacct gttcgacgcc
     3901 gggaacgtga tcgacattac cgaccggatc aaggaacgca ccgacgacct gctctgggag
     3961 aacgtcgcgc agtacgttga ggtgtcggcc acgatcggga gcaccgccat cgccggggac
     4021 aagaacttct cctcgagcgg cgtcagcctc agctcgccgt tcatccccaa cgccgcctat
     4081 gcgcaggcga tcgccgacag cttcatcgac ttctacaaca agaagcgggc gctgatcgag
     4141 accaccgtca aggacagcga cgggaggatc taccggccgc tcgacagagt gatgatcgac
     4201 ggggcccgtt ggatggtgta cgagtccgat cacgacctgg gggccgaaga ggtctcggta
     4261 aagttcctcg aggatgcagc ctgatgccca agatcaaccc gggcgatcct ggcggtggcg
     4321 ggggaagcgg gagcttcggg ctaccgcagt ccggaataac gctcaagggt gacgtgcagc
     4381 tcatcgcctt cccgggggtg cagatcaccg tcattcctga gcagaaccgg atcgagctgc
     4441 gccccgggtt cagcgacgaa gttcaggggg atctcatgta tcgcggtgtc gacggctggc
     4501 agcgcctggg agccgggagc gctggacaga agctccagac gaacggcccg ggcgcggatc
     4561 cgtcctgggt aacgtagaat ctctggtagt acaccgactc gcctgatcag cgcgccggcg
     4621 ccaagttaac cgggggttgt ggccccgcaa ccaggtccac gattccgatg gcgctcgggc
     4681 acggctggac cccaaagttc cggatcaccc cgccggcggg caacccctac gtcgtcgaca
     4741 tcagcgccta ccagtggctc gtcgtgttcc agcccacctg ggagccggag ttcctgttct
     4801 ccgagatgct cgaccggcgc ctgacgaaga cgcgctacgg ctaccgcggg cgctgccaca
     4861 tcctgctcga gctcatcacg ccatcggcga gcgagacgga actgaatgac tccgtgctca
     4921 acccgtccga ggacgacgac tatctgatcg aactctccct cgacggcggc accacctatc
     4981 gcgaggtcct cctggagaag catcaggatg cgaacctcgg ggacaagaac atcggcatcc
     5041 ggattgacac ggtctgggtg acggccgccc tggcgcccat gaagccatca atcgccgctg
     5101 ggagatggta gtgccaacca agcaatggag atcgtcatgc taagacctgc agggatcgta
     5161 agcttcgaat cggccgcggc agagaccgcg cgcaccaccg tcgcgctcaa cccgatcgct
     5221 ggcgtgacga tccaggtgac ggagatcggg atcagctgca atgcggcgcc caactcgacc
     5281 gcggcgcccg tacgatgggc catcaagcgc accggaacgg cgctgccaac ggcgaccagc
     5341 cagacccccg aaaagctcca gagcgacctc ggtggcactc tccagacggc cggcctggtc
     5401 aatgtcaccg tcgaaggaac gctcgttggc aaccggctgc atcgctggat ggtcccgaac
     5461 gtgagcggga tgatctgggt cgcggccccg gggcgtgagt tcgatcagac cgacggcggc
     5521 tcgaacgttg cggctatcaa cctggagcac caggatgcgc ttccggcctc cgtgcaggca
     5581 gaaacgtatc tcgtattcga agagtgagga gtacggcgtg atcgcttgcc tgcgggcggc
     5641 gcgtttcctg gttcctggcg gcggggggat tcatgtcgag cttcgtcgcc atcacgacct
     5701 ccggtccgca ggcaccggag atcgggcagt gtctttcgtc gtggcgaaac ggatgaccgc
     5761 ctacccgcgc acgatgacgt tgaagaagtt cgggacactc cccgaggcca gggcctactg
     5821 gatgaagcag gtcacgatca tcgaggacca gggtttcgag cgccgcgatc cgcgcatcat
     5881 tgggtttcac gaagaggatt gaatgtcgac tgtcaccaac cggatagcaa cgccgtcgac
     5941 tttgaacgtt agctcctatg ccagcggggc gttcacgccg gccgtcggcg atctgctcgt
     6001 ggccttcatt ggcaagaccg cgagcgtaaa tgacggctcg ctcacggaca gccagggcgg
     6061 gacctggacc ctgatcagga acgcgggcaa ggtggcgagc gccgacaccc tccagctctt
     6121 cgtccgaaac cagctgatcg catcagcctc ttccatgaca gtgacctatg actgcacggg
     6181 ggacgcagcg acgggctgca tcatccaggt cgcttcggtg gcggggatgt ttcggacggg
     6241 agcctcggcc gtttcccaga acgccgcgga gaacaaccag gctgctggtg gcacgcctgc
     6301 tccggtgttc gctttcaact gccagaccgg caacccgacc ctgggagcgg tcttcaacgc
     6361 cacgaatccg gcgaccatga ccccgcccgc gagctggacg gagcagaacg atacgggcta
     6421 cagcactccg ggaaccggcc aggaatacgt gtcacgcgac agcggcttca cgggcacgac
     6481 gatcacttgg ggcagcacgt cggggaccgc cttctgcgac atcatcgtcg agctcgatac
     6541 gaccaccttc ccgacgattg acttccgcaa ctcagaggtg gcgtgatgat ccgtaatacc
     6601 cgcatcttgc cgcgcctgga ccggagcgcc gacgtcaggc cgcgcttcgg gccagtcgtc
     6661 aacccggtag tcgcggccgt cgcggctact gccatcgtcc ccttcctcgt cgtgacttcc
     6721 gtccaggcca gcccgagtcg gacggtgcag cctcagttct tccggatggt gccatacgtc
     6781 ccggtgccgc cggtcatcgc accgcgagtc gtggggttcc ccaggctgca gccggtcagc
     6841 gttccggcgt cgaagttcat tcaggttccg ccaccgcccg tcgcgccacc cgggtccagt
     6901 ccggtcatct cccccatcag aggtcagtgg atgggggatg ccagggaatc gaggggcgaa
     6961 gtccgcgcgc ggttcctacc gttcccctac ttcgaccagt cgctgcagcc gccgaagatc
     7021 cggcacaccc gcgtccgggc tgtctccaag atgcccctgg cgggctccat gccgcaggct
     7081 cccattgccg tcggggaggc gaaggcaccg aaggccgggt tgaccgggca ggcgcctcag
     7141 gccatgggag agggccaggc agcgctggct gtcaccggct cacaggggcc aggggcatcc
     7201 gcctcaatcc aggcgccgcg cgccgcggca gctccggtca tcgtgcgcgt ccggttcgcc
     7261 tcgaggagtc cgcgcgctgg gatctccggg agctcggctc acgggacggt cggcatcaag
     7321 gcgccgaaag gtgaggggag ctgaagcatg tacacgatcg atccgctgaa cggcgacctg
     7381 gtcatggacc ggggggactt cgtcaacccg gagctgagga tcacggatgc tgacggggtg
     7441 gccctgaacg tgacgggcgc gaccttcaag ctcacggtga aggcggccct ggaggactcc
     7501 ctggccgccg ccatgttcca gctggtgtcg cccggagact tcgatctctc gggcgcggcc
     7561 accggcatcg tggtcccgct catcctcgag accttcaccc aggggctcgc cggcgattac
     7621 agctatgacg tcgagatggt ccttggcggg aagactacga cgctcgtgcg cgcggcgctc
     7681 ttccgggtcc tgaaggaagt cagtgatgtg ggtgtcgcac cctcgccgcc gtccgtgctg
     7741 gttcccttcc ccggcgacat ccagataatc ggcggcaaag tctacatcac cgacacgggc
     7801 atcggcgcga acgcaggcaa gaactggaag ctcgtcgtac aggacggcgt cttcgacgtc
     7861 cagggaccta gcgacgtggt cccattctga ggagagaatc aatgcgatcg tggctgaggc
     7921 gctccctagt tctgtggctc gtcctatttc ccgggggatt gttcgcgcag ggcacggtcg
     7981 tggggaggat caagactcca gcgaagatcg gcacggacta cacgcttacc aacccgacga
     8041 ctgcgccgac ggccgccatt agcgccgcgg gcggtagttg caacacaacg cagacgtggc
     8101 gcttttatac agcctgggcc aatctcgccg gcgtgacg
//
LOCUS       DASYRV010000396         2339 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3407628, whole genome shotgun sequence.
ACCESSION   DASYRV010000396 DASYRV010000000
VERSION     DASYRV010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2339
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3407628"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..468
                     /locus_tag="VGQ24_10650"
     CDS             <1..468
                     /locus_tag="VGQ24_10650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455344.1"
                     /translation="AALARLQEGFDWRREAWETLTHELRHHLEWRARAPDLENFDWAV
                     EHNYARQEGEPFDPTFFLSGELEPSGNYRVEDDVFIDQIVRSVPASVSFAWRGRSYGA
                     PTPEGAELPCFLTVEGVEDPPEGDLVLVLRRRPGVRDLFGKTGVFQSAVRVTA"
     gene            517..1641
                     /locus_tag="VGQ24_10655"
     CDS             517..1641
                     /locus_tag="VGQ24_10655"
                     /inference="COORDINATES: protein motif:HMM:NF014312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome D1 domain-containing protein"
                     /protein_id="HEV8455345.1"
                     /translation="MTGRLALLGLLLTSAAQAQSGDVGYRVGVVSESGDIVTWLKPHG
                     TGLTLDRVVPVGIMPSDIDGPHNIAVSPDGKSYYVTLAHGTPYGSLWKLNYLGDSLLG
                     RAQVELFPTTITVTPDGQYAFVANSDFHGDHPRVNVISAVHTPTMTKITDIPACDMPH
                     GVKVNHGGTRVYISCMHSDEILQLDVATFGISRRAKTGGGRAMAAAAGPAHHGPAAPA
                     AAGGANECSPTFVSVSPDDKRLYVACNSGNSLQVWDAATLAKVKEIPVGKGAYNVEPS
                     PDGKLVIVTNKKDQSVSLIDAARLTEIARIPTSKKIVHGVAYSPDNRLAYISSESIGA
                     DPGAVDVIDLAAKKLVASVSVPGQPTGITILRSPTTSARR"
     gene            1649..1921
                     /locus_tag="VGQ24_10660"
     CDS             1649..1921
                     /locus_tag="VGQ24_10660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455346.1"
                     /translation="MVYEVVSTMDGPEILRRAKRFFAERVPLNAAYPEQEGPSYLTLR
                     GQGGEEIAFAVWATPAGTRVRVSTLFFDQVVDRFLSTLPLPSEHVA"
     gene            1918..2175
                     /locus_tag="VGQ24_10665"
     CDS             1918..2175
                     /locus_tag="VGQ24_10665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455347.1"
                     /translation="MTVLPLRVMVEDVWDEVFLELPDELPVSEVKRQALELTRVKRDP
                     SEYVLKFRGAEVSNESVSLANAGLVPNGALIVLARRRRPVR"
BASE COUNT          408 a          734 c          774 g          423 t
ORIGIN      
        1 gcggcgttgg cgcggcttca ggagggcttc gactggcgcc gagaggcctg ggagacgctg
       61 acgcacgagc tgcggcatca tttggagtgg agggcgcgag ctcccgacct ggagaacttc
      121 gactgggcgg tggagcacaa ctacgcccgc caggagggcg agccgttcga tcccacattc
      181 ttcctcagtg gcgagctcga gcccagcggg aactaccggg ttgaagacga cgtcttcatc
      241 gatcagatcg tacgctcggt ccctgcctcg gtgagctttg cctggcgggg acgaagctac
      301 ggagccccaa ccccggaggg agcggagctt ccctgtttcc tcactgtgga gggcgttgaa
      361 gacccacccg agggggacct cgtgctggtc ctgcggagaa ggcccggcgt tcgcgatctg
      421 ttcggcaaaa cgggagtatt ccagagcgca gtgcgggtaa ccgcctaggc gggtatcttc
      481 cgccgggagc ggtgtgatca aagaggatgg agatccatga caggtcgttt agcgctactc
      541 ggattgctgc tgacgagcgc cgcccaggcc cagagcggcg acgtgggcta tcgggtcggc
      601 gtggtgagcg aatccggcga catcgtaacc tggctcaagc cccacggaac cggcctgact
      661 ctggaccggg tggtaccggt cggcatcatg ccgtcggata tcgacgggcc tcacaacatc
      721 gccgtgtcgc ccgatgggaa gagctattac gtgactcttg ctcacggaac cccgtacggc
      781 tcactctgga agctgaatta tctgggagac tcgctgctgg gccgcgccca ggtcgagctc
      841 tttcccacca ccatcacggt taccccggac gggcagtacg ccttcgtggc caactccgac
      901 tttcacggcg atcaccccag ggtaaacgtt atctcggcgg tccacactcc cacgatgacc
      961 aagattaccg acatcccggc atgcgacatg ccgcatgggg tgaaagtgaa ccacggcggg
     1021 acccgggtct acatctcctg catgcacagc gatgagattc tccagctcga tgtggcgaca
     1081 ttcggaatct ctcggcgggc caagacaggc ggagggcgcg cgatggcagc ggcggccggt
     1141 ccggcgcacc acgggcccgc ggctccggca gcagcgggcg gcgcgaatga atgctcgcct
     1201 accttcgtgt cggtctcgcc cgacgacaaa cggctctacg tcgcctgcaa ttccggcaac
     1261 agccttcagg tctgggacgc cgcgacgctg gccaaggtta aggagatccc tgtcggcaag
     1321 ggggcctaca acgtagagcc ctcacctgac ggcaagctgg tgatcgtcac caacaagaaa
     1381 gaccagagcg tgagcctgat cgacgcggct cggctcacgg agatcgcgcg cattccgacc
     1441 agcaagaaga ttgtacatgg cgtggcgtac tcgccggaca accgcttggc ctacatctcg
     1501 agcgagtcga ttggcgccga cccaggggcc gtggacgtga tcgacctggc ggcgaagaag
     1561 ctggtggcca gcgtttccgt cccgggacag ccgaccggaa tcaccattct gcggtcaccc
     1621 acaacctctg ccaggcgctg agcaccctat ggtgtacgag gtggtctcca cgatggacgg
     1681 ccccgagatt ctgcgccggg ccaagcgctt cttcgcggag cgggttccct tgaacgcggc
     1741 atacccggag caggaagggc cgagctatct caccttgcga gggcagggtg gcgaggagat
     1801 cgcgttcgcc gtatgggcca ccccggccgg cacccgggtc cgggtgtcca cccttttctt
     1861 cgatcaggtg gtggaccgct ttctgtccac acttcccctg ccctccgagc acgtcgcgtg
     1921 accgttttgc cactccgagt catggtcgag gacgtgtggg atgaggtctt tctcgagctt
     1981 cccgatgagc ttcccgtctc ggaagtcaaa cggcaggctc tcgagctcac ccgggtgaag
     2041 agggatcctt ccgagtacgt cctcaagttt cgcggcgccg aagtgtccaa cgagtcggta
     2101 tcgctcgcaa acgcggggct ggtgccgaac ggagcgctga ttgtcctggc gcggcgccgc
     2161 cgaccggtcc gctaacggct cggacgtgtc gccggctgca tcccgaactt tcacgatcgt
     2221 cgcggcaggg gtgcttgcgt ttgacggagt cgcgctcctc ggtctcggcg tctggagtag
     2281 gcggacgatg ctggtgctcg tgggcgcggt cttgtgtctg tcggctctgc tggtactgc
//
LOCUS       DASYRV010000397         2772 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2370230, whole genome shotgun sequence.
ACCESSION   DASYRV010000397 DASYRV010000000
VERSION     DASYRV010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2772
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2370230"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..260
                     /locus_tag="VGQ24_10670"
     CDS             <1..260
                     /locus_tag="VGQ24_10670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455348.1"
                     /translation="GKPLSLQGSTHAEIVFQHASGYDLSYQPTYKGPKDFVPKFQALA
                     EVREAGDFERVLSWGFGLNGSSCWHVLELSNPVRLAVDFSH"
     gene            501..1211
                     /locus_tag="VGQ24_10675"
     CDS             501..1211
                     /locus_tag="VGQ24_10675"
                     /inference="COORDINATES: protein motif:HMM:NF040039.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6186 family protein"
                     /protein_id="HEV8455349.1"
                     /translation="MGVSEPSRDRATPSPGPRDVAGVRVIGLIGWALIFGAFLVWEGL
                     GLTLGHQWPTLSHMLRAVTRPLPGRLALFGLWLWVGWHLFIRGWNFFLRGPLPEAPSL
                     RGSGGLSLGQLWQHAIVPLTGFYALFLAMLAFSARRQVPVGHDAASEATSAPRAAWLR
                     AVSAILFTVAGGYVFFVAMIGAYVLVSGSDPGGLLGHAIMGGALLAFGVVVPGFILLS
                     GAAGSKHGGGRVGRRTLG"
     gene            1216..1407
                     /locus_tag="VGQ24_10680"
     CDS             1216..1407
                     /locus_tag="VGQ24_10680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455350.1"
                     /translation="MASTVGRHPLGTTLRKRIFFIVIVTALLVFTVTVTLVASEEEAT
                     DSTPSAYPTRSRWRRSNTG"
     gene            complement(1365..2396)
                     /locus_tag="VGQ24_10685"
     CDS             complement(1365..2396)
                     /locus_tag="VGQ24_10685"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HEV8455351.1"
                     /translation="MTMHVGRSARRALAGLALALAAAVLPRCSPVVQEAQGADAWTPL
                     GGAVAVATAPAALPVPETAGPVESPPPRAPAPQVAAPSVVVANLDTGEILFAKRPDDH
                     RPIASLTKIMTAMIVMETTQPTDVVTVSKLAARQEPTKLGLRRGQRMDVHDLLYALLL
                     HSSNDVAVAFAEHVSHSVRAFDAMMTQRALGLGLTDTWFASPSGLNDDGYSTARDVAA
                     MTRWAYQSPTFASIVATKTYTLEMPSGGRVSLRNLNDLLFNYQGAIGVKTGYTSRSHW
                     SLVGVAKRGGTRLMVVLLGDPAKPFSDGKKLLNWGFRVTRPTARSVQHSSSLRDQPVF
                     DLRHRERVG"
     gene            complement(2539..>2772)
                     /locus_tag="VGQ24_10690"
     CDS             complement(2539..>2772)
                     /locus_tag="VGQ24_10690"
                     /inference="COORDINATES: protein motif:HMM:NF016143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HEV8455352.1"
                     /translation="GVWAHSAYEQNQLESGDLEEALTAAAAVGDDRIQRSAGRRVNPE
                     TWTHGSSAQRVQWLKTGFKSGDPGSCDTFSGSI"
BASE COUNT          402 a          927 c          958 g          485 t
ORIGIN      
        1 gcggaaagcc actctccctc cagggaagca cccatgcgga gatcgtcttc cagcacgcca
       61 gcggttacga cctctcctat cagccgacct acaaggggcc gaaggacttc gttccgaagt
      121 tccaggcact ggcggaggtc cgcgaggccg gcgacttcga gcgggtcctc agctgggggt
      181 tcggcctgaa cggatcgagc tgctggcacg tgctcgagct gtccaacccg gttcgcttgg
      241 ctgtggactt ctcccactag gttttcgcga gcggaacccg gtcgcaggaa aaccacaggc
      301 cggggcgaga gaggtctcgc cccggcttgt cgtccggctg atgggtggcg ccggcccgct
      361 cctgagccca ccaggcgcgc tcgcgcccac gttcatcgcc tctccacgaa ccgcgggacg
      421 ctcgcctcct gtgggcgaca tgcgatcagg gctcgtgccc tgactgacct cgagaggtgc
      481 gggttgaaag gagcatggga atgggcgttt cggaaccctc gcgggatcgg gccacgcctt
      541 cgcccggacc ccgagatgtg gcgggagtcc gcgtgatcgg cctgatcgga tgggcgctga
      601 tcttcggagc cttcctggtg tgggaggggc ttggcctcac cctcgggcac cagtggccga
      661 cgctcagcca catgctgcgc gccgtcaccc ggccgctccc gggccgcctg gcgctgttcg
      721 ggctgtggct ctgggtgggt tggcacctgt tcatacgagg atggaatttc ttcctgcggg
      781 ggccgctgcc cgaagcgccg tccctccgcg ggagcggcgg cctgagcctg ggccagttgt
      841 ggcaacacgc catcgttccg ctgaccgggt tctacgcgct gtttctcgca atgctggcgt
      901 tctccgctcg tcgtcaggtt cccgtcggac acgacgcagc tagtgaggcc acgtcagctc
      961 cccgagccgc atggctgcgt gccgtttccg ccatcctgtt cactgtggcc ggcggctacg
     1021 tcttcttcgt ggcgatgatc ggcgcgtacg tcctggtgag cgggagcgac cccggggggc
     1081 tgctcggtca cgcgatcatg ggcggtgccc tgctcgcgtt cggcgtggtc gttcccggct
     1141 tcatcctctt gtcgggggca gccggctcga agcacggcgg cggccgggtt gggaggcgca
     1201 ccctagggtg agcccgtggc ctctacggtc ggccggcacc cactcggaac gaccctgcgc
     1261 aagcgaatct tcttcatcgt gatcgtcacc gctctcctgg tcttcacggt gaccgtcacc
     1321 ctggtggcca gcgaggagga agcgaccgac tcgacgccat cggcctaccc cacgcgctct
     1381 cggtggcgaa ggtcgaatac tggctgatcc cgaagggaac tcgagtgctg aaccgatcgg
     1441 gcggtggggc gcgtgacccg gaagccccag ttcagcagct tctttccgtc actgaagggc
     1501 ttggccggat ctccgaggag gaccaccatc aaccgggtgc caccccgctt tgccaccccc
     1561 accaacgacc agtgcgacct tgacgtgtag ccggtcttca cgccgatggc gccttgatag
     1621 ttgaacagga ggtcgttcag attgcgcagg ctcacccgcc ctccggacgg catctcgagc
     1681 gtgtacgtct tcgtggctac gatcgaggcg aaggtgggcg actggtaggc ccacctggtc
     1741 atggcggcga cgtcgcgcgc cgtcgaatac ccgtcgtcgt tcagtccgct tgggctggcg
     1801 aaccaggtgt cggtgaggcc gaggccgagc gcccgctggg tcatcatggc gtcgaacgcg
     1861 cggaccgagt gcgagacgtg ctcggcgaaa gccacagcca catcgtttga tgagtgcagc
     1921 agcagagcgt agagcagatc gtggacgtcc atccgctggc cgcgccgcag gccgagcttg
     1981 gtgggctcct gccgcgcggc caacttgctg accgtgacca cgtccgtggg ctgcgtcgtc
     2041 tccatcacga tcatcgccgt catgatcttg gtgaggctcg cgatgggccg gtgatcgtcc
     2101 gggcgcttgg cgaagaggat ctcgccggtg tccaggttgg ccaccacgac cgatggcgcg
     2161 gccacctggg gcgccggagc ccgcggtggc ggcgattcga ctggaccagc agtctccggc
     2221 acgggcaagg cggcaggggc ggtggcgacc gccaccgcgc caccgagggg ggtccaggca
     2281 tcggcgccct gggcctcctg caccacgggc gagcacctcg gcaggacagc cgctgccagc
     2341 gcaagcgcta atcccgccaa tgcccgcctg gccgagcggc cgacatgcat cgtcatagct
     2401 ccacgaacat ggctgaccgt ttccccctcg cgttagtgat cggcccggca gggcaggcgg
     2461 ctttaagggc cggaccctaa cacccgctgg accccctggc ggggatgtgc tggctcaggc
     2521 tgggaaggac gagggcgatc agatgctgcc gctgaacgtg tcgcaggagc cagggtcgcc
     2581 gcttttgaag ccggtcttga gccactggac gcgctgggcc gaggacccgt gcgtccaggt
     2641 ctcggggttg acgcggcggc cggcagagcg ctggatccgg tcgtcgccga cggccgctgc
     2701 cgcagtcagg gcttcttcca ggtctccgct ctcgagctgg ttctgctcgt aggcggagtg
     2761 agcccacacc cc
//
LOCUS       DASYRV010000398        19563 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2237033, whole genome shotgun sequence.
ACCESSION   DASYRV010000398 DASYRV010000000
VERSION     DASYRV010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 19563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19563
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2237033"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1032
                     /locus_tag="VGQ24_10695"
     CDS             <1..1032
                     /locus_tag="VGQ24_10695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455353.1"
                     /translation="VAFKHGFVRPDGHKTIAFGASILLVSVMVASVANRFSPQAAKLL
                     LAAPVGLALGWASDKYGRAHPYARLSEQARGIATVLSGKAAATYGARFEQTMDSIRQA
                     IPLPGIPGTVDVYGWEQAAALAYGLDYRPRPVFQGYSAYTEPLIDLNLSHLKSDEAAR
                     TLLFDVGSIDDRYPSLDDGALWPEIISRYGLLSTTPRFLVLQRRAHPLAVSTTTLQRT
                     RAEVGAEIVIAGDSPVIWAKIDFRETAAGKLISTAFRPPIVTIRVQLVTGQEAEYRLV
                     PAMAGAGFLLSPLIETREHFSALLNGNLGALQARRVRTVTILSKATLRIAYQQPIPVA
                     LFTMSIGSR"
     gene            1172..2446
                     /locus_tag="VGQ24_10700"
     CDS             1172..2446
                     /locus_tag="VGQ24_10700"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HEV8455354.1"
                     /translation="MSAGSGKPRDAAGLPQEVAIGQIGQDSSLRPLPISIVGGCGHVG
                     LPLGIVLAECGFDVTLVDVAVDKVEAVNCGQMPFLEDDAPARLSKALAIGRLRATVDQ
                     TTVRAATAVIVIIGTPVDEYLNPRIHDITRVMGQLMPYLRAEQTIILRSTVFPGTSER
                     IRDFLHSNGIGASVGFAPERIAQGRALHELRSLPQIISAFDPRGIQVQRDIFGAVAHG
                     KIIELQPVEAELAKLFSNAYRYINFAISNQFFAIAEEAGADFTAIHHAVTHEYPRMGA
                     FARAGFAAGPCLFKDTMQLAAFSHTTFLLGHAAMLINEGTPAVTVDMLEARLRREVRG
                     SAVGILGMTFKKDNDDTRASLAFKLRKLLEAKGADVICHDPFLDPKAFPGLRLSPLDE
                     VRRRPAIIIGAPHSAYQELRFSADQIVVDIWR"
     gene            2448..3467
                     /locus_tag="VGQ24_10705"
     CDS             2448..3467
                     /locus_tag="VGQ24_10705"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEV8455355.1"
                     /translation="MKFLVTGAAGFIGGYLVEELLKGGHEVYGVDNFSKYGPVHKSYD
                     QHPHYHFVEGDAKNVALMKELTSDVDQVIAGAAMIGGISYFHEMAYDLLAENERICAA
                     TFDAAIWARVNRRLDRVVVISSSMVFECATVFPTPEGEQLRSPPPLSTYGFQKLATEF
                     YCKGAHEQYGLPYTIVRPFNCVGTGEGRASVDKEILSGNVKLAMSHVVPDLVQKVVKG
                     QDPLHILGAGSQVRHYTYGGDLARGIRMAAESPKAANNDFNLSTEQSTTVLELAELIW
                     KKLKPGVPFRYVSDKPFPYDVQKRVPDVRKARDVLGFEATTSLETVLDEVIPWIEEQV
                     QLGKL"
     gene            3474..4208
                     /locus_tag="VGQ24_10710"
     CDS             3474..4208
                     /locus_tag="VGQ24_10710"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8455356.1"
                     /translation="MALLHVVCPVYHEQDNIPRLWEEVQRHFHFSYRLHFVYDREDDP
                     TVPILRSLQRQAPDRIVLIHNPAGGVLNALKTGLRQMPPGVPVLVMMADLSDDLQVVE
                     PMVAAWHGGVKVVVASRYMPGGRQIGGPPLKRFLARLAGNSLYWLRRIPVHDATNNFR
                     LYDSSFLNTVQIESRGGFEVALELTVKAVRAGLPIVEIPATWRDRSAGASRFKLMKWL
                     SHYLRWYLLALRPRGLGRSGNAPKVT"
     gene            4449..6122
                     /locus_tag="VGQ24_10715"
     CDS             4449..6122
                     /locus_tag="VGQ24_10715"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEV8455357.1"
                     /translation="MSEGSVGVGSLGRHRAGLLLTLGFLLWSLVALPDYGQVWDEPET
                     REASFLNLHALKAVVTRQPRPEWAFHELPGYYFSFDTMRGGFAWVVSHRLHLLDDVLA
                     FHLFNVLLSTLSIFLLYHLALAASGQRRIAVLSAAVLALFPQFLAHAQTNPKDLPGLF
                     VYILSIFAFVRLDRASRWWDVLAAGLALGLALTTTVTAGFLFPLLGLWLLVTRWPLLK
                     ERWRSYLLLPIIAGLTAFLSWPWLWRHPIQKVVWVIARLSTFHADLMGAGGVLYLGSV
                     YKPWALPWHYFIVSFLVTTPLLYLVFTLASFTRLRPPRERIAGSPWAVAVLGWLWCGI
                     LVAAEARASMQYDGIRHVLMIVPGFCLLAGIGLDRILGWIEGARPGERFRVWRHRGAA
                     AAATAAFASVGVQLIPMHPYEGAYLNEATNAWLPGGAEDMFEVEYWQQPYKEGAEWLN
                     AHAERDAEIFVAFDTRTADRYLDRESIELVDSTLPRFEDRSRPAYFMTITRSAMFPES
                     IRHIVRTYEPLFEIRRQKGTLLRVYSNRRPKSGPVTTSGRDGARPGKEP"
     gene            6213..7817
                     /locus_tag="VGQ24_10720"
     CDS             6213..7817
                     /locus_tag="VGQ24_10720"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEV8455358.1"
                     /translation="MNIDRRVGRWDANAVLLAVVALGLGTRTFNLNQSLFVDEAWVAN
                     AVLADTLRDMFHYDWVPAPPPLFLLLVRAAVSVLGPSDVAFRMVPVLAAMGAILLLAL
                     LARRLLGATSAILSVTLLVASPVAYRWAVSLKQYSSDAFAALLLIWLIYRYLDRPAWR
                     NYLLLAGGYAVCLLLSYPAVFFIPCGLYALTLSGWRAREGSSGLPAAHLSRVVVFSLL
                     MLAEVYLIYAAFVRPNVTPELTRFWFSDFPAGSGIRPALSYLVHRWPGFASGFPPGEP
                     RVEVAVAIVLVVALGALRSLVSLLRRDPEAAHLFVIGASVCLALSAAGALRRYPVSEE
                     RTSLFLLPLLILWFVLGLRVIGDGLAGGPLASKHRDRIALAVRWACPAAVLVFFFAHV
                     LRYRPTEEDKAAVTYLLEHVDRDDALYVHASMFEQFRFYRGRRVRQDTLAVYFGDTGW
                     RCCTRHNETHLKTMDYDFLRNDLLSFLATSPARRRWFLFIDRPGDWGGRDDPRLFREI
                     LENRQCRQEAEKRFTGVLIRAYRCAA"
     gene            complement(7777..9618)
                     /locus_tag="VGQ24_10725"
     CDS             complement(7777..9618)
                     /locus_tag="VGQ24_10725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455359.1"
                     /translation="MLTFLHEYGWIVRLLALYGAVGGFLVVPFRHTIKYALFAAPLAG
                     LLISSCGIAALYTVLGLSLATSTAAMAVVGGAATILALARARPRPARDDLALVVIAAV
                     IAAVATWLANFTTIKLGAPGFLYMDGTDQLGYAQLADWLRTHPVHQLPEATPVRPYES
                     WPEFSFHTDPRFGAYFTLAVIAMLRGESGMFAYDNATALVLLAGYLGIAAVMARSPRG
                     FALLLIGLLTCHWFEYSRSGYFGKTLGYPAALFVVGLFLAARQRLEREHITILAALTC
                     GAAVVFPGTVTALFLVILGGTFLAFRLLLERQELGAIKEESLVLALLVGVAVASSGLL
                     SRPSHALYPQHAVSWPAMLSWLFDVKAVPDDDAAMLRFPSARVLLLQLLAIGVSCALL
                     LAALVKRNAVAFGFIAGPLLLVAALFGAGATTIAYELPGLIYPASLCGAIALVEAASA
                     GESGRDRRMTYGMLALIAAAIALRLPRYAIGVQRYAGAGVSGSVQYVKSDMDGLAAAI
                     GRDTVTVSVTNRVLGIPILVELGRRQLPMRWTPDAYRAILGYRPWTIPEAPPTAKRSL
                     RLDVIDAPPDERCTVTLRTRQYKLLECRNEKAPAFMPRSDMPGSGPP"
     gene            complement(9683..11359)
                     /locus_tag="VGQ24_10730"
     CDS             complement(9683..11359)
                     /locus_tag="VGQ24_10730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455360.1"
                     /translation="MVVRELDRAAPALSGKLTLYAVLCLLAIATIVTRVHGLDLPLWL
                     DESWVANSVLEPTVREMMYYRTRLQTVPPLFLLSARSVVRVLGISNESFRLLPVVFGL
                     LSFPLMILAARRLLRSFFAFVAIGLFVFSPAIVHYTHEFKQFSGDVFVSLTLLNMGLL
                     YLSRPSRRLLVLWTALYVVLLFLSYQAVLFLPGFCLVVLLGGPDVGGRVKPWRERWLE
                     AGTAAFCGSAATLVAYVVFILPNTLPRLYTSFSNAFEGDGARQFLAFYFRKVLFLGSM
                     LLPEEGAGRLDLAARIVILGGILLAAGSLRRRGRGNVLIFLGLPILCAYVLDALGRYP
                     GVGIPRLMLFSVPIVILLFVYGAETIAHRLGALRAREGETSPVAVVDSLGAVCFALML
                     GLIGTYVAKRPVPLLREELVQDTQGSVRYVSERGRPDDVVYVHAGMVEQFRLYSRLTP
                     MRSGRVIYGRVGWGCCPRVPWLKGTQDEITLPEEVARLEVPRITKSIWLLYEDGPGQW
                     DWFDRQFGRRDPEVFAVALSSAGCRAGGTKAFHWIRVDRFDCDRPGGRPR"
     gene            11792..12757
                     /locus_tag="VGQ24_10735"
     CDS             11792..12757
                     /locus_tag="VGQ24_10735"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEV8455361.1"
                     /translation="MPDRLTGGSEVSGCDLSVVVPVYKEENNIAPFLERIESVLTSLG
                     GSYEIIFCLDPGPDRTEQVILEEINRNPNIRLVVFSRRFGQPSATMAGLLLCKGAACA
                     VIDVDLQDPPELIPEMSARLREGYEVVYAKRRSRKGETAIKRVVARFGYWVIAKLSDV
                     KIPRDTGDFRIMTRRVIEELRRLNETHGFLRGLVAYVGFSQTFVEYDRDERARGRGNY
                     NRFVGSLKIGLNGLISFSSRPLQLMSLAGGLVAGFSFLLGAWYVIQKLIGFDLSPGLP
                     TTVLVVTFFAGVQLLSLGLIGEYVGRIYDEVKRRPMFIIDRKVNF"
     gene            12835..13791
                     /locus_tag="VGQ24_10740"
     CDS             12835..13791
                     /locus_tag="VGQ24_10740"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEV8455362.1"
                     /translation="MAHFVTGAAGFIGSHLVDRLLRDGHEVVGYDNFSTGQREFLAEA
                     RRSPRFALVEGDTLDLEALTRAMKGTEFVFHLAANADVRYGTEHPRKDVEQNTLATFN
                     VLEAMRIHGIRGIAFASTGSIYGEPKAFPTPEDAPFPIQTSLYGASKLASEGLIQAYC
                     EGFGFHGCIFRFVSILGERYTHGHVYDFYRQLRADPTRLQVLGNGKQRKSYLYVQDCI
                     DAMLIAIGKAPGKLGIFNLGTDEYCQVDDSIGWICDHLGLSPERVYTGGERGWIGDSP
                     FIFLDCSRIRALGWKPALDIREGVIRTLRYLEGEGGLLERRT"
     gene            13808..14671
                     /locus_tag="VGQ24_10745"
     CDS             13808..14671
                     /locus_tag="VGQ24_10745"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEV8455363.1"
                     /translation="MKLTGRRAVITGSSQGFGFAVARAFLDEGAQVMLCARNADRLRR
                     AQQKLAELAGDESRVLATPADVSVPGEVQRLVEATVAGFGGLDILVSNAGVHGPKGPV
                     QEVSWEEWRQALEINLLGTVLLCRAALAHFLRRNYGKILLLSGGGATKPMPYLSAYAA
                     SKAAIVRFGETLAEEVRASGIDVNSVAPGAMNTRLLDDILEAGPERVGRSYYQQALRQ
                     QAEGGTPLERGASLCVFLASQESDGITGKLISAVWDPWDSLPRHLEDLKGSDIYTLRR
                     IVPSDRGKEWG"
     gene            14673..15653
                     /locus_tag="VGQ24_10750"
     CDS             14673..15653
                     /locus_tag="VGQ24_10750"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEV8455364.1"
                     /translation="MRVGIIGCGLAGLKRARALGGARLVACADAAAERAEALAGATPG
                     QAEVLPEWRAVVERPDIDLVIVATPHHLLAEITLAAVSAGKHVLVEKPAARKARELDP
                     VLEAVKRGRVLVRVGFNHRYHPALRRAKELSSEGAIGELMYVRGRYGHGGRIGYEKEW
                     RAQPDLAGGGELLDQGVHLIDLARWFLGDFESVQGFARTYFWNMPVEDNGFMLLQTAA
                     RQAAFLHASCTEWKNQFSYEIFGRLGKLEITGLGGSYGTERLAYYRMGPRMGPPETTI
                     WEYPMADDSWGAEFAEFAEDIRLGRQPSAGLADARSALGVVERIYEASGR"
     gene            15650..16633
                     /locus_tag="VGQ24_10755"
     CDS             15650..16633
                     /locus_tag="VGQ24_10755"
                     /inference="COORDINATES: protein motif:HMM:NF020133.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455365.1"
                     /translation="MIITRSPLRISLGGGGTDLPSYYRDHSGFVLSAAIDKYVYITLH
                     QTFDQEIILKYSKLERTRSVDEVQHPLIREALRLVGMESPHLEITSMADMPAGTGLGS
                     SGSFTTALLKALHTLKKNLVHPQELAEQACRIEIEILGEPVGKQDQYIAAFGGITCFR
                     FLPNHQVEAWPLKIATDTLYNLEDNLLLFFTNYSRTASDILREQDQKCRASDAEMTSN
                     LHFVKELGRKSREALENGDLASFAELMNLHWEHKKRRSARMSNDRIEQWYALARASGA
                     LGGKVVGAGGGGFLMFYADDKARLRAAMRHAGLQEVRFRFDFEGTKVVAQS"
     gene            16630..17388
                     /locus_tag="VGQ24_10760"
     CDS             16630..17388
                     /locus_tag="VGQ24_10760"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HEV8455366.1"
                     /translation="MSESLFAVAILGGGLATRLRPLTDAIPKALVDVNGEPFIAHQLR
                     LLRSNGLDRMVYCAGYRGEMIREYVGTGARFGVTVEFSFDGLPLLGTAGAIRRALPLL
                     GDSFFVLYGDSYLPCDYRAVQRAFVGSGQPALMTVFRNENRWDPSNVEFSEGRILAYD
                     KTGRTARMQHLDYGLGVFARRAFDRVPRDSATDLARLYQSLLERGELAAWEVTQRFYE
                     VGSFDGLEETRRYLAAHPPRPLAAAEGGAGESAR"
     gene            17385..17981
                     /locus_tag="VGQ24_10765"
     CDS             17385..17981
                     /locus_tag="VGQ24_10765"
                     /inference="COORDINATES: protein motif:HMM:NF024969.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEV8455367.1"
                     /translation="MSFAREFLAEAGRIVERLDPAAIDAVVALLVDTRARGGRLFVLG
                     VGGSAANASHAVNDFRKLTGIEAYAPTDNVSELTARANDEGWASVFEGWLRVSRLAAN
                     DLILVFSVGGGNVEKNISPNLVAALQYAKGVGARVAGVVGRDGGYTATVADACVIVPT
                     VNPAHVTPHAEAFQAVVWHLLVSDPRLKTAPTKWESVR"
     gene            17978..18544
                     /locus_tag="VGQ24_10770"
     CDS             17978..18544
                     /locus_tag="VGQ24_10770"
                     /inference="COORDINATES: protein motif:HMM:TIGR01662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEV8455368.1"
                     /translation="MSAAPRRAAFLDRDGVLNRAIVKAGKPYPPAALADLEILPDAPA
                     ALAALRAAGLLLIVVTNQPDVARGTQRREVVDSINAAVLDALPLDDLFVCYHDEGDGC
                     DCRKPRPGLLIRAAAKHGIDLGSSFLVGDRWKDVAAARAAGCAAILIDSGYAESGLDS
                     AAPDRTVGSLSEAAGWILTQLGTRGGLP"
     gene            18541..19257
                     /locus_tag="VGQ24_10775"
     CDS             18541..19257
                     /locus_tag="VGQ24_10775"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR02134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEV8455369.1"
                     /translation="MTSVSALRVKLFADGADRAGMLEMYRQPMIKGFTTNPTLMRKAG
                     VSDYRAFAREILCAISDRPISFEVFSDEFDEMERQAREITQWGENVYVKIPVTNTRGE
                     SSHAVIRSLTRAGIKVNVTALLALDQVRQVSDALAGGAPACVSVFAGRVADTGRDPVP
                     LMAAAVELLRPHPNIELIWASPRELLNIFQADAVGCHIITATNDILAKLALVGKDLHE
                     YSLDTVKMFRGDAVKAGFDL"
     gene            complement(19267..>19563)
                     /locus_tag="VGQ24_10780"
     CDS             complement(19267..>19563)
                     /locus_tag="VGQ24_10780"
                     /inference="COORDINATES: protein motif:HMM:NF015665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HEV8455370.1"
                     /translation="ESPALAVTQSLLDAGAVVKAFDPIARRAAEQVFGGRVEFVDSLE
                     SSLENVSAVLIMTRWPQFERLPELIAALPRPPLVVDGRRMLAKDSVPRYEGIGL"
BASE COUNT         3336 a         6460 c         6477 g         3290 t
ORIGIN      
        1 gtcgcattca aacacgggtt cgtccgtcct gatgggcaca agacgatcgc attcggcgcc
       61 agcatccttc tcgtcagcgt gatggttgcc tccgtggcga acaggttcag cccacaggcg
      121 gccaagctcc ttctcgccgc cccggttggg ttggccctcg gatgggcgag tgacaaatac
      181 ggccgcgcgc atccgtacgc acgcctgtct gagcaagcac ggggaattgc aacggtcctg
      241 agcggcaaag cggcggcgac ctacggcgcg cggttcgaac agactatgga cagtattcgc
      301 caggcgatac cgctgcccgg tatccccgga accgtggacg tttatggatg ggaacaagcc
      361 gcggcgctgg cgtacggcct ggactatcgg ccccgcccgg tctttcaggg ctactcggca
      421 tacacggagc cgttgattga tttgaacctg tcgcacctga agagcgatga ggccgcacgc
      481 acattgctgt tcgatgtcgg ctccatcgac gaccgatacc cctccctgga tgatggagcg
      541 ctttggcccg agatcatttc ccgttatggc ctgctcagca ccaccccccg attcctggtg
      601 ctccagcgac gagcgcaccc gctcgcggtg tcgaccacga cgctgcaacg tacccgagcg
      661 gaagtcggag ccgaaatagt catcgcaggc gactcaccgg tcatctgggc gaagatcgat
      721 ttcagagaga cggctgccgg gaagctgatc tcaaccgcct tccgcccacc gatcgtcacg
      781 atcagagtcc agttggtcac gggccaggaa gcggagtacc gcctggtgcc tgcgatggcc
      841 ggtgcggggt tcctgctatc gccgctcatc gagacccggg aacacttttc ggcactcctg
      901 aacggcaatc tgggtgcgtt gcaggcgcga cgggttcgca cggtgacgat actgtcgaag
      961 gcgaccttgc gtatcgcgta ccagcagccc atcccggtcg ccttgtttac gatgagcatc
     1021 ggctcacgct gacctctcga agcagcggca acttgcggga cccggacctg cggctattct
     1081 attcgtgggg tgcatggcac agtggattga cagggacagg caggcgcccg gagctcgggc
     1141 gttcgcgtgc caacttctcc gtgggcaatg agtgtcggcc ggatcaggga aaccacgcga
     1201 cgctgccggg ttacctcagg aggtcgccat aggacagatc ggtcaggact cctcgctccg
     1261 cccgctaccc atctcgatcg tgggcggctg cgggcacgtg ggcctgcccc tcggcattgt
     1321 cctggcggaa tgcggattcg acgtcacgct ggtcgatgtt gctgtggaca aggtcgaggc
     1381 cgtgaactgc ggacaaatgc cctttctgga agacgatgcc ccggctcgtc tctccaaggc
     1441 gctggccatc ggaaggctcc gggcaacggt ggatcagact acagtccgtg ccgccaccgc
     1501 ggtgattgtg atcatcggaa caccggtcga cgagtacctc aatccgcgca ttcatgacat
     1561 tacgcgggtg atgggtcagc tgatgccgta cttgcgcgcg gagcagacca tcatcctgcg
     1621 ctccaccgta tttccaggca ccagcgagcg catccgggac ttcctgcact ccaacgggat
     1681 cggggcctcg gtcggcttcg cccctgagcg catcgcgcaa ggcagggcgt tgcacgagtt
     1741 gcgctcactg ccccagatca tctcggcgtt cgacccacgc ggcatccagg tgcagcggga
     1801 catcttcggt gccgttgcgc acggcaagat catcgagctg cagccggtgg aagcggagct
     1861 ggcgaagctg ttcagcaacg cgtaccgcta catcaatttc gccatcagca accagttctt
     1921 cgccattgcg gaagaggctg gggcggactt caccgcgatc caccatgccg tgacgcacga
     1981 gtatccacgc atgggggcct tcgcgcgcgc gggattcgcg gcgggaccct gcctcttcaa
     2041 ggacacgatg caattggccg cgttcagcca caccacgttc cttctgggcc atgccgccat
     2101 gctgatcaac gagggcacgc cggcggtgac ggtggacatg ctggaggccc gattgcgccg
     2161 cgaggtgcga gggagcgccg tcgggatcct gggcatgacg ttcaagaagg acaacgacga
     2221 cacccgggcc tccctggcgt tcaagctgcg caagctgctg gaggccaagg gggcggacgt
     2281 gatttgccac gatcccttcc tggacccgaa ggcgtttccc ggcctccgcc tatctccgct
     2341 ggacgaggtg cgccggcgcc ctgcgatcat cattggggct ccccattctg cctatcagga
     2401 actccgcttc agcgcggacc aaattgtggt cgatatctgg agataggatg aaattccttg
     2461 tcactggtgc ggcagggttc atcggcggct acctggtgga agagctcctc aagggaggcc
     2521 atgaggtcta cggcgtcgac aatttctcga agtatggccc ggtccacaag agctacgacc
     2581 agcacccgca ctatcacttc gtggaaggcg acgcgaagaa cgtggcgctg atgaaggagc
     2641 tcacctctga cgttgaccag gttattgccg gagcagcgat gatcggcggg atcagctatt
     2701 tccatgaaat ggcatacgac ttactcgccg aaaatgagcg catctgtgcc gccacgtttg
     2761 atgccgccat ctgggcgcgg gtgaatcgca gactcgatcg cgtcgtggtc atctcgtcct
     2821 ccatggtatt cgagtgcgcg acggtgtttc cgaccccgga aggcgagcaa ctgcggtcgc
     2881 cgccgccgct ctccacctac ggcttccaga agctggcgac ggagttttac tgcaagggag
     2941 cccacgagca atacggtctg ccgtacacca ttgtgcggcc gttcaactgc gtcggcacgg
     3001 gcgaagggcg ggcgtcggtt gacaaggaga tcctctccgg caacgtgaag ctggccatga
     3061 gccatgtggt gcccgacctg gtgcagaagg tagtgaaagg tcaggatccg ctccacattc
     3121 tgggcgcagg gagtcaggta cgtcactaca cctatggggg ggacctggcg cgggggatcc
     3181 gcatggccgc ggaatcgccg aaggctgcca acaacgactt caacctctcc acggaacaat
     3241 ccacaacggt actggagctg gcggagctga tctggaagaa gcttaaacca ggagtgccgt
     3301 tccgctatgt atcggacaag ccattcccat acgacgttca gaagcgggtt cccgatgtcc
     3361 gcaaggccag ggacgtactg ggcttcgagg cgacgacatc gttggagacc gtgctggacg
     3421 aggtgattcc ctggattgag gagcaggtgc agttggggaa actgtaggct gccatggcgc
     3481 tgctccacgt tgtttgcccc gtgtatcacg agcaggacaa catcccccgc ctgtgggaag
     3541 aggtgcagcg gcacttccat ttctcctatc gcctccactt cgtctacgac cgggaggatg
     3601 atccgaccgt cccgatactc cgctccctgc agaggcaggc acccgacaga atcgtgctga
     3661 tccacaatcc cgccggcggg gtgctgaatg cgctgaagac gggattgcgt cagatgccgc
     3721 cgggcgtgcc cgtgctggtg atgatggccg acctgagcga cgacctgcag gttgtcgaac
     3781 ccatggtggc cgcgtggcac ggcggcgtaa aggtggtcgt ggccagccga tacatgccgg
     3841 gaggacgtca aatcggcggg cccccgttga agcgattcct ggcacgtctt gccggcaaca
     3901 gtctttattg gctgcggcga ataccggtgc acgatgcgac gaacaacttt cgactgtacg
     3961 acagcagctt cctcaacacc gtccagatcg aaagcagggg tggttttgaa gtggctctgg
     4021 aattgacggt gaaggcggtc cgggccgggt tgccgatcgt ggagatcccc gcgacgtggc
     4081 gggatcgctc ggccggagct tcccgattca agctgatgaa atggctgtct cattacttgc
     4141 gctggtactt gcttgcgctt cggccgcgag gcctcgggcg ctccgggaat gcgccgaaag
     4201 tgacgtgatc ttgagtcctc ctggcgggga cgtccttcat cacggcgaac gcgccctcac
     4261 ccacgtcacc gcggtaactc tgcgccagag agagtgtctc acaccgcaag cgggggacgg
     4321 ggagggctcc gcatctccgt ggacggcctg tcccggccgc ttccggggat ctcccgctgg
     4381 cgcgggcgcg cccctgcctc ctaagttcaa gccgagatgg gccgggggcc gcaagctgac
     4441 gaggtgacat gtccgagggc tctgtcgggg ttggctcgct tggcagacac cgcgccgggc
     4501 tgcttctcac cctcggattc ctgctctgga gcctcgttgc cctgccggac tacgggcagg
     4561 tctgggacga gcccgaaacg cgcgaagcgt cctttctcaa cctgcacgcg ctgaaggccg
     4621 tggtcacgcg gcagccgagg ccggaatggg cgttccacga gctgccgggg tattacttca
     4681 gtttcgatac gatgcgcggt gggttcgcct gggtggtctc gcaccgcttg cacctgctcg
     4741 acgacgtcct cgcgttccat ctcttcaacg tcctgctctc aacactctcg atctttctgc
     4801 tctatcatct cgcgctggcc gcttcaggcc aacgccgcat cgccgtgctt tcggctgccg
     4861 tgctcgcgct cttcccccag ttcctggccc acgcccagac caacccgaaa gacctgccgg
     4921 ggctcttcgt ctacatcctg tctatcttcg cattcgtgcg actcgacagg gccagcaggt
     4981 ggtgggacgt gctcgccgcg ggactggcgc tcgggttggc cctgacgacc accgtcaccg
     5041 ccgggtttct gtttccgctg ctcgggctct ggctcctggt gacccgctgg ccgctcctca
     5101 aggaacgctg gcggtcgtac cttctcctcc ccatcatcgc gggcctgacg gccttcctgt
     5161 cctggccgtg gctctggaga catcccatcc agaaggtggt ctgggtcatc gcacgcctca
     5221 gcacctttca tgcagacctg atgggagcag gcggagtgct ctatctcggc agtgtgtaca
     5281 agccgtgggc gttgccgtgg cactatttca tcgtcagctt cctggtcacg acccccctgc
     5341 tgtacctggt cttcactctg gcttcgttca cgcggctccg tcctccgcgc gagcgaatcg
     5401 cagggagtcc gtgggccgtt gccgtgctcg gatggttgtg gtgcggcatc ctggtcgcgg
     5461 ccgaggcacg cgcctcgatg cagtatgacg gcatacgcca cgtcctgatg atcgtgccgg
     5521 gcttctgcct cctggccggc atcggcctgg atcggatcct cggatggatc gagggcgccc
     5581 ggcccggcga acgtttccgc gtgtggcgcc accgcggcgc ggccgcggcc gcgaccgcag
     5641 cgttcgcgtc cgtcggggtg cagctgatcc cgatgcatcc ctatgaaggc gcctatctga
     5701 acgaggcgac caacgcgtgg ctgccgggcg gcgcggagga catgttcgaa gtggagtact
     5761 ggcagcaacc gtacaaggaa ggcgccgagt ggctgaacgc tcacgccgag cgcgacgcgg
     5821 agatcttcgt cgccttcgac acgaggacgg cggaccgcta cctcgaccgc gagtccatcg
     5881 agctggtcga ctcgacgctc ccgcggttcg aggatcggag tcggcccgcc tacttcatga
     5941 ccatcaccag aagcgccatg ttcccggagt cgatccggca catcgtacgc acctacgagc
     6001 ccctcttcga gattcggcgg cagaagggca ccctgctgcg ggtctattcc aaccggcgcc
     6061 cgaaatcggg tcccgtcact acttcgggcc gggacggtgc gaggcccggg aaggaaccat
     6121 gacctctaca gcgagccacg tcatgccgcg ggcgagcacc ggtcagtggc gcacggggag
     6181 ggcaacccca tgaggtccca gggatcgagc gcatgaacat cgaccggcgg gtcgggcgct
     6241 gggacgcgaa tgccgtcctc ctcgccgtgg tcgcgctggg cctggggacc cggacgttca
     6301 acctgaacca gagcctgttc gtcgatgagg cctgggtggc caatgccgtc ctggccgaca
     6361 ctctgcggga catgttccac tacgactggg ttccggcccc tccacccctc ttcctgctgc
     6421 tggtccgcgc ggcggtgagc gtcctggggc cgtccgacgt cgccttccga atggtccccg
     6481 tcctcgcggc gatgggagcc attctcctgc tggccctcct ggccaggcgc ctccttggcg
     6541 cgacgtcagc tatcctctcc gtgaccctcc tcgtcgccag tccggtcgcc tatcgctggg
     6601 cggtcagcct caagcagtac agctcggacg ccttcgccgc tctgctcctg atctggctga
     6661 tctaccgata cctggatcgg ccggcatggc gcaactatct cctgctcgcc ggcggctacg
     6721 cggtttgcct cctcctctcg tatcctgccg tcttcttcat cccgtgcggc ctgtatgccc
     6781 tgaccctcag tggatggcga gcgcgagaag ggtcctcggg gctgccggcc gcccacctct
     6841 ccagagtggt cgtcttctcg ctcctgatgc tcgcggaggt gtacctgatc tacgcggcct
     6901 tcgtccggcc caatgtcacg ccggagctga ctcggttctg gttctcggat tttcccgccg
     6961 gaagtggcat ccggccggcg ctatcctacc tggttcaccg atggcccggg ttcgccagcg
     7021 gcttcccgcc cggcgagcct cgtgtggaag tcgctgtggc catcgtgctc gtcgtggctc
     7081 tgggcgcgct ccggtcgctg gtctccctgc tccggcggga tccggaggcg gcgcatctgt
     7141 tcgtcatcgg cgcctcggtg tgtcttgcgc tgtcggccgc cggcgcgctc cggcgctacc
     7201 ccgtaagcga ggagcggacg agtctgttcc tgctgccatt gctgattctc tggttcgtgc
     7261 tcggcctgcg ggtgatcggc gacggcctcg ccggcggccc tctcgcgtcg aaacaccggg
     7321 accgcatcgc cctcgcggtg cgctgggcct gcccggcggc agtcctggtc ttcttcttcg
     7381 ctcacgtgct ccgctatcgc ccgaccgagg aggacaaggc cgcggtgacc tacctgctgg
     7441 agcacgtgga ccgggatgac gctctctacg tgcacgcctc gatgttcgag cagttccggt
     7501 tctaccgtgg caggagggtc cggcaggaca cgttggcagt ctacttcggg gacacgggat
     7561 ggcgctgttg cacccggcac aacgaaacgc acctcaagac catggactac gattttcttc
     7621 ggaacgactt gttgtccttc ctcgccacct cgccggcccg gaggcggtgg ttcctgttca
     7681 tcgaccggcc gggcgattgg ggcgggcggg atgacccgag gctgttccgc gagatcctgg
     7741 aaaaccggca atgccggcag gaggcggaga agaggttcac gggggtcctg atccgggcat
     7801 atcgctgcgc ggcatgaacg ccggcgcctt ttcgttccgg cactcgagaa gcttgtactg
     7861 cctggtcctg agcgtcaccg tgcaacgctc gtcgggcggc gcgtcgatga cgtccaaccg
     7921 cagcgatcgc ttggcggtgg gtggcgcctc gggaatggtc cagggacggt accccagaat
     7981 cgccctgtag gcatcgggcg tccagcgcat cgggagctgg cgccgcccca gctcgaccag
     8041 aatcggaatt cccagcacgc gattcgtgac gctcaccgtg acggtgtccc ttccgattgc
     8101 ggccgccaga ccgtccatgt cgctcttgac gtactgcacc gacccggaca cgccggctcc
     8161 cgcataccgt tgcacgccga tcgcatagcg gggcagtctc aaggcgatcg cggcggcaat
     8221 cagcgcgagc atcccgtagg tcatgcggcg gtcgcgaccc gactctccgg ccgacgcggc
     8281 ctcgaccagc gcgatcgcac cgcacagcga cgcgggatag atcagccccg gcagctcgta
     8341 ggcgatcgtc gtcgcgccgg ccccgaacag ggccgcgacc aggagcagcg ggcccgcgat
     8401 aaagccgaac gccaccgcgt tccgtttcac cagcgcggcc agcagcagtg cgcacgagac
     8461 gccgatcgcg agcagctgca ggagcagcac ccgggccgag gggaagcgca gcatcgccgc
     8521 atcatcatcc ggaacggctt tcacatcgaa gagccaggaa agcatcgccg gccagctcac
     8581 cgcgtgctgg gggtagagcg cgtgactcgg acgagacaac aggcccgagc tcgcgaccgc
     8641 tacgccgacc aggagcgcca ggacgagact ctcttccttg atggcgccaa gctcctgtcg
     8701 ttcgagcagg aggcggaagg cgaggaacgt tccgccgaga atgacgagga acagggccgt
     8761 gacggtcccc ggaaaaacga cggccgcgcc gcaggtcagc gcggccagaa tcgtgatgtg
     8821 ttcgcgctcg agccgctgtc gtgccgccag gaaaaggccg accacgaaca gcgcggcggg
     8881 atagcccagc gtcttgccga agtacccgct ccggctgtac tcgaaccaat ggcacgtgag
     8941 gagaccgatg agcagcaggg cgaagccgcg cggcgaacgc gccatgaccg ccgcgatgcc
     9001 cagatagccg gccagcagga cgagcgccgt ggcgttgtcg taggcaaaca tcccggattc
     9061 gccacggagc atggcgatga cggcaagcgt gaagtaggcg ccgaatcggg gatcggtatg
     9121 gaagctgaat tccggccagc tttcgtatgg acgaacgggc gtggcttccg ggagttggtg
     9181 caccgggtgg gtgcggagcc aatcggcaag ctgcgcgtag ccgagttgat cggtgccgtc
     9241 catatacagg aagcccggcg ctccgagctt gatcgtcgtg aaattcgcaa gccaggtggc
     9301 cacggcggcg atgacggcgg cgatgacgac caacgcgaga tcgtcccgag cgggccgtgg
     9361 cctggcacgg gcaagagcca ggatggtggc ggcgccgccc accaccgcca tggccgccgt
     9421 cgacgtggcc agcgacaggc ccagcacggt gtacagggct gcgatgccgc aagacgaaat
     9481 cagcagtccc gccagcggcg ccgcgaagag cgcgtatttg atggtgtggc gaaagggaac
     9541 caccaggaag ccgcccacgg cgccgtacag ggcgagcaac cgcacgatcc acccatactc
     9601 gtggagaaac gtcagcacgg gatcgaagat cgcttctgca tggctccgta gctcgtccct
     9661 cggaggagtt tcaatcggcc gactacctcg gccgtccgcc cggccgatcg cagtcgaacc
     9721 gatctacgcg aatccagtga aacgccttcg tgcctccggc ccggcacccg gcgctcgaca
     9781 gcgcaaccgc gaatacctcg ggatcacgcc tgccgaactg tcggtcgaac caatcccact
     9841 gaccgggacc gtcctcgtag agcagccaga tcgacttcgt gatgcgcggg acctcgagcc
     9901 gcgcgacctc ctccggcagc gtaatctcgt cctgcgtccc cttaagccac gggacgcggg
     9961 gacaacaacc ccacccgact cggccataaa tcactcgtcc ggaccgcatc ggcgtcagcc
    10021 gcgagtacag ccggaactgc tccaccatac cggcatgaac gtagaccacg tcgtccggcc
    10081 ggccccgctc gctgacgtag cgaacggagc cctgcgtatc ctggaccagc tcctctcgaa
    10141 ggagcggcac cggccgtttc gcgacgtatg tcccgatcag tccgagcatc agggcaaaac
    10201 acaccgcccc cagcgaatcg accacggcca cggggctggt ctcgccctcg cgagcccgca
    10261 gcgcgcccag ccgatgcgcg atcgtctccg ctccatagac gaacaggaga atcacgatcg
    10321 gcaccgagaa gagcatgagc ctcggaattc cgacgccggg ataacgaccg agagcatcca
    10381 gcacgtaggc gcacaggatg ggaagaccca ggaagatgag cacattcccg cggccacggc
    10441 ggcgcagaga accggcggcg agaaggatgc cccccaggat cacgatcctc gccgccaggt
    10501 ctagccggcc ggctccttcc tccggcagca gcatcgaacc gaggaagagc accttccgga
    10561 aatagaaggc caggaactgc cgggcaccat cgccctcgaa cgcattactg aacgaggtgt
    10621 acaacctggg cagcgtattc ggcagaatga agacgacgta ggcgacgagc gtcgccgcgg
    10681 acccgcagaa cgcggccgtc ccggcctcaa gccatcgctc ccgccagggt ttcacacggc
    10741 cgcccacgtc aggaccgccg agcaagacca cgagacagaa acccggcagg aacaggaccg
    10801 cctggtagga gagaaagagc aggaccacat agagcgccgt ccacaggacc agcaggcgtc
    10861 tggatggccg gctcaggtag agcaggccca tgttcagcaa cgtcagcgaa acgaagacat
    10921 cgccgctgaa ttgcttgaac tcatgggtgt agtgaacgat cgccggagaa aacacgaaca
    10981 ggccgatcgc cacgaaggca aaaaacgacc gcagcaagcg gcgagccgcc agaatcatca
    11041 gcggaaacga caggaggccg aagacaacgg gaaggagacg aaagctttca ttcgaaatgc
    11101 ccaatacccg aacgaccgat cgcgccgaca gcaggaagag cggcgggacg gtttgcagcc
    11161 tggtccgata atacatcatc tccctgacgg tgggctccag aaccgaattc gcgacccagg
    11221 attcgtccag ccacagaggc agatcgaggc cgtgaacgcg cgtgacgatg gtggcgatcg
    11281 ccagcaggca gaggacggcg tacagggtga gtttccctga cagtgctgga gcggcacggt
    11341 cgagctcacg aaccaccatg cgtttcgaag tgctcagcgg atacctggat cgttgtcgag
    11401 aggcccccgc gcggcggcat cgtgccagcg cgagatgggg atttccatct tcgtcacgaa
    11461 ggtacgggtc gggtttccgg cggtcaacgc gcgcccccga acggcagccg ctggccggag
    11521 cggctcgggt tcatgcaccg ccctcccggg ggcagggtcc ggccggcccc gggcatcggg
    11581 tcgccgtctc ctcccccggc ccggccaccc ccgctcggct ccgcgcggtt cgggggaagc
    11641 cagggaacct ccgttcggcc ggacgagcaa gccctgttcc ggagcggcga cccacgatta
    11701 gcttcagtcc gcgacgatcg cctctgctca taccccgggc atccatgcgc aaaggtatcc
    11761 ccagagcaac ctctcccggc acggggcagc gatgcctgat cgcctgacag gcggaagcga
    11821 ggtctccggc tgcgacctgt cggtcgtggt gccggtctac aaggaagaga acaatatcgc
    11881 tccgttcctc gagcggatcg agtccgtcct gacgagcctc gggggctcgt acgagatcat
    11941 cttctgcctc gatcccggcc ccgaccggac cgagcaggtc atcctcgagg agatcaatcg
    12001 caacccgaat atccggctgg tcgtcttttc ccgccggttt ggccagccca gcgccacgat
    12061 ggccgggttg ctgctgtgca agggcgccgc ctgcgccgtg atcgatgtcg acctgcagga
    12121 cccgcccgag ctgatccccg agatgagcgc caggctgcgg gagggctacg aggtagttta
    12181 cgccaaacgg cggtcccgca agggcgagac cgccatcaag cgcgtggtcg ccaggttcgg
    12241 ctactgggtg atcgccaagc tcagcgacgt caagatcccg cgggacaccg gcgacttccg
    12301 catcatgacc cgccgggtga tcgaggagct gcgacggctc aacgagaccc acgggttcct
    12361 ccgcgggctg gtcgcctatg tgggattcag ccagaccttc gtggaatacg accgcgacga
    12421 gcgggcccgc gggcggggca actacaaccg cttcgtcggg tcgctcaaga tcggcctcaa
    12481 cgggctgatc agcttcagca gccggccgct ccagctcatg tcgctcgccg ggggcctggt
    12541 ggccggtttc agcttcctcc tgggcgcgtg gtacgtgatc cagaaactga tcggcttcga
    12601 cctctcccca gggctgccca ccaccgtcct ggtggtcacc ttcttcgcgg gcgtccagct
    12661 gttatcgctc gggctgatcg gggagtacgt cgggcggatc tacgacgagg tgaagcggcg
    12721 gccgatgttc atcatcgacc gcaaggtgaa tttctagcgt gggtgatccg ccgtgaggcc
    12781 cggccgcccc cgccacggcc cgctcccgcg ctgagggagg gaaaccatgg agtcatggcc
    12841 cacttcgtga cgggggccgc gggtttcatt ggaagccacc tcgtggatcg tctgctgcgg
    12901 gacggtcacg aggtcgtggg ctacgacaac ttttccaccg gccagcgcga attcctggcg
    12961 gaggcccgcc ggtccccgcg cttcgccctt gtggagggcg acactctgga cctggaggcc
    13021 ctgacccggg cgatgaaggg taccgagttc gtgtttcacc tggccgcgaa cgccgacgtc
    13081 cgctacggca cggaacaccc acggaaggat gtggagcaga acacgctcgc gaccttcaac
    13141 gtgctggagg cgatgcgaat ccacgggatc cggggcatcg ccttcgcctc cacgggttcg
    13201 atctacggtg agccgaaggc cttcccgact ccggaggatg ctcccttccc catccaaacc
    13261 tccctctacg gcgcctccaa gctcgcgtcg gaaggcctga tccaggccta ctgtgagggc
    13321 ttcgggttcc atggctgcat cttccgcttc gtgtcgatcc tcggagaacg ctatacccac
    13381 gggcacgttt acgacttcta ccgccagttg cgggccgacc ccacccgtct ccaggttctc
    13441 ggcaacggca agcagcggaa atcgtacctg tacgttcagg actgcatcga cgccatgctg
    13501 atcgcgatcg ggaaggcccc gggaaagctc ggcatcttca acctgggcac cgacgagtac
    13561 tgccaggtgg acgactccat cgggtggatc tgcgaccatc tcggcctgtc tcccgagcgc
    13621 gtctacaccg gcggcgagcg gggctggatc ggcgacagcc cgttcatctt tcttgattgt
    13681 tcgcggattc gggcgctggg ctggaaaccc gccctcgaca tccgggaggg cgtgatccgg
    13741 accctccgct acctcgaggg ggaaggcggg ctgctggagc gccggacatg agcggcgggt
    13801 tccgacggtg aagctgaccg gcagacgagc cgtgatcacg ggttccagtc aggggttcgg
    13861 gttcgcggtg gcgcgcgcct tcctcgacga gggcgcacag gtcatgctgt gcgcccgcaa
    13921 cgccgaccgc ctccggcgcg cgcagcagaa gctggccgaa ctggcgggag acgagtcccg
    13981 ggtgctcgcc acgccggccg atgtttccgt gcccggggaa gtccagcggc tggtcgaggc
    14041 cacggtggcg gggttcggag ggctcgacat cctcgtctcg aacgccggtg ttcacgggcc
    14101 gaaggggccg gtgcaggagg tcagctggga ggagtggcgc caggcgctcg agatcaatct
    14161 cttgggcacg gtgctcctgt gccgggcggc attggcacac tttctgcgcc ggaactacgg
    14221 caagatcctg ctcctctcgg gaggtggggc gaccaagccg atgccctacc tcagcgccta
    14281 cgccgcctcc aaggccgcca tcgttcggtt cggggagacc ctggccgagg aggtgcgcgc
    14341 atccggcatc gacgtcaact cggtcgcgcc aggcgcgatg aacacccggc tgctcgacga
    14401 cattctcgag gcggggccgg aacgcgtggg ccgctcgtac taccagcagg ccctccgcca
    14461 gcaagcggag ggggggaccc ctctggaacg gggtgcctcg ctctgcgtgt ttctggcatc
    14521 ccaggagagc gatgggatca ccggcaagct gatcagcgcg gtctgggatc cgtgggatag
    14581 cctgccgcgg catctcgagg acctgaaggg ctcggatatc tacacgttgc ggcggatcgt
    14641 tccttcggac cgcggcaagg aatggggctg aggtgagggt cgggatcatc ggctgcgggc
    14701 tcgcggggct gaagcgcgcc cgggcgctgg gtggggcccg gctggtcgcc tgcgccgatg
    14761 ccgcggcgga gcgcgcggaa gcgctggccg gcgccacccc gggtcaggct gaggtgttgc
    14821 cggagtggcg cgcggtcgtg gagcggcccg acatcgatct ggtcatcgtc gccacgccgc
    14881 accacctgct cgccgagatc acgctggcgg cggtctcggc cggcaagcac gtgctggtcg
    14941 agaagcccgc ggctcggaag gctcgggagc tcgatccggt cctcgaggcg gtcaagcgtg
    15001 gccgggtact ggtgcgggtc gggttcaacc atcgctacca tcccgcgctc cggcgagcga
    15061 aggagctctc cagcgaggga gccatcggcg agctcatgta cgtgcgggga cgctacgggc
    15121 atgggggacg gatcggctac gagaaggaat ggcgggccca gccggacctg gcgggcgggg
    15181 gggagctgct cgatcagggc gtccacctga tcgacctcgc ccgctggttc ctgggcgact
    15241 tcgagtcggt ccagggattc gcccgcacct acttctggaa catgccggtc gaggacaacg
    15301 gcttcatgct cctccagacc gcggcccggc aagcggcgtt cctgcacgcg agctgcacgg
    15361 agtggaagaa ccagttctcc tacgagatct tcggacgcct gggcaagctc gagatcaccg
    15421 gcctcggcgg cagctacggc accgagcgcc tggcctacta ccggatgggc ccgcggatgg
    15481 gaccacccga gaccacgatc tgggagtacc cgatggccga cgactcctgg ggggcggagt
    15541 ttgccgagtt cgccgaggac atccggctgg gacggcagcc gtccgccggc ctcgccgacg
    15601 cgcggtccgc gcttggcgtc gtcgaacgca tctacgaggc gtccggccgg tgatcatcac
    15661 ccggagccct ctgcggatct ccctgggggg aggggggacc gatctgccct cgtactatcg
    15721 ggaccacagc gggttcgtgc tgtccgccgc gatcgacaag tatgtgtata tcaccctgca
    15781 ccagaccttc gatcaggaga tcatcctcaa gtactcgaag ctggagcgga cccggtcggt
    15841 ggacgaggtt cagcacccgc tgattcgcga ggccctccgc ctggtcggga tggaatcgcc
    15901 ccacctcgag atcaccagca tggccgacat gccggccggg accgggctcg gctcgtcggg
    15961 gagcttcacc accgcgctcc tcaaggccct ccacaccctc aagaagaacc tggtacaccc
    16021 ccaggagctg gccgagcagg cgtgccgcat cgagatcgag attctggggg agccggtcgg
    16081 caagcaggac cagtacatcg ccgccttcgg cggcatcacc tgcttccggt tcctgcccaa
    16141 ccaccaggtg gaagcctggc cactgaagat tgccaccgat acgctgtaca atctcgaaga
    16201 caacctgctg ctgttcttca ccaactactc ccggaccgcc tcggatatcc tccgggagca
    16261 ggaccagaag tgccgggcgt ccgatgccga gatgacctcc aacctccact tcgtcaagga
    16321 gctcggacgc aagagccggg aggcgctgga gaacggcgac ctggcgagct tcgccgagct
    16381 gatgaacctg cactgggagc acaagaagcg gcgctcggcc cggatgagca acgatcggat
    16441 cgagcaatgg tacgcgctgg cgcgtgccag cggcgcgctg ggcggcaaag tcgtcggagc
    16501 gggcggcggc ggcttcctga tgttctacgc cgacgacaag gcccggctgc gggccgccat
    16561 gcgtcacgcc ggactccagg aggtccggtt ccgcttcgac ttcgagggca ccaaggtggt
    16621 ggcccagtca tgagcgagtc gctctttgcg gtcgcgatcc tgggcggcgg gctggccacg
    16681 aggcttcggc cgctgacgga cgcaattccc aaggccctgg tggatgtgaa cggcgaaccg
    16741 ttcatcgccc accagctgcg cctgctgcgg agcaacggcc tcgaccggat ggtgtactgc
    16801 gccggctatc ggggcgagat gatccgggaa tacgtgggca ccggcgcgcg gttcggggtg
    16861 accgtcgagt tctcgttcga tggtctgccg ctgctcggca ccgccggcgc gatccggcgg
    16921 gcccttcccc ttctgggaga ttcgttcttc gtcctctatg gggactcgta cctgccgtgt
    16981 gactaccggg ccgtccagcg cgcgttcgtc gggagcgggc agccggccct gatgacggtc
    17041 ttccgaaacg agaatcggtg ggatccgagc aacgtcgagt tctccgaggg gcgcatcctg
    17101 gcctacgaca agaccggccg gaccgcccgc atgcagcatc tggactacgg cctcggcgtc
    17161 ttcgcccggc gggccttcga tcgggtgccg cgcgactcgg ccaccgacct ggcgaggctg
    17221 tatcagtcgc tgctcgagcg gggcgagctc gccgcctggg aagtcaccca gcgcttctac
    17281 gaagtcgggt ccttcgacgg gctcgaagag acccgccgct acctcgcggc tcatccgccg
    17341 agaccgctcg cggccgctga aggcggcgcc ggggagagtg cccgatgagc ttcgcccgcg
    17401 aattcctcgc cgaagcggga cggatcgtgg agcggctcga cccggcggcg atcgacgccg
    17461 tggtcgcctt gctggtggac acccgcgcgc ggggaggacg gctgttcgtg ctgggggtcg
    17521 ggggcagcgc cgccaacgcc tcgcacgcgg tgaacgattt ccgcaagctc accggcatcg
    17581 aagcctatgc cccgaccgac aacgtgtccg agctgactgc acgagccaac gacgaggggt
    17641 gggccagtgt cttcgagggc tggctccggg tgagccggct ggcggcgaac gatctgatac
    17701 tggtgttctc ggtcggcggc gggaacgtcg agaagaacat cagccccaat ctggtggccg
    17761 cgctgcagta cgccaagggg gtcggcgccc gggtcgcggg cgtggtcggg cgggacgggg
    17821 gctataccgc gacggtcgcc gacgcctgcg taatcgtccc gaccgtcaat cccgcccacg
    17881 tgacgcccca cgcggaggcg ttccaggccg tcgtctggca cctcctggtt tccgatccga
    17941 ggctcaagac cgcgccgacc aagtgggagt cggtccggtg agcgccgcgc cccgccgcgc
    18001 cgccttcctt gatcgcgacg gagtgctcaa ccgggcgatc gtgaaagccg ggaagcccta
    18061 tccgccggcc gcgctcgccg acctcgagat cctgcccgac gcgccggccg cgctcgcggc
    18121 gctccgggcc gcgggcttgc tcctcattgt ggtcaccaat cagccggacg tcgcccgcgg
    18181 gacccagcgg cgggaggtgg tggactcgat caacgccgcg gtgctcgacg cgctgccgct
    18241 ggatgacctg ttcgtctgct accacgacga aggcgacggg tgcgattgcc ggaagccccg
    18301 tccgggtctc ctgatccggg ccgccgccaa gcacggcatc gacctcgggt cgagcttcct
    18361 ggtcggcgat cgatggaaag atgtcgccgc cgcccgcgcg gcgggttgtg cggccatcct
    18421 gatagattcc ggctacgcgg agtccgggct ggacagcgcc gcgccggacc gcaccgtagg
    18481 atcgctctcc gaggccgcgg ggtggattct gacacaactc ggcacacggg gaggacttcc
    18541 atgacatccg tatcagcgct ccgggtcaag ctgttcgccg acggcgcgga cagggcggga
    18601 atgctggaga tgtaccgcca gccgatgatc aaggggttca ccaccaaccc caccctgatg
    18661 cgcaaggccg gggtctccga ctaccgggcg ttcgcgcggg agattctctg cgccatttcc
    18721 gatcgcccga tttcgttcga ggtattctcc gacgagttcg acgaaatgga gcgccaggcg
    18781 cgggagatta cccagtgggg tgagaacgtc tacgtcaaga ttccggtgac caacacccgg
    18841 ggggaatcgt cccacgcggt gatccgatcc ctgacccggg cgggaatcaa ggtgaatgtg
    18901 accgccctgc tggcgctcga ccaggtgcgt caggtgagcg acgccctcgc cggcggcgcc
    18961 cccgcgtgcg tctcggtctt cgcggggcgg gtggccgata ccgggcggga tccggtgccg
    19021 ctcatggccg ccgcggtcga gctgctgcgc ccgcacccga acatcgagct catctgggcg
    19081 agcccccgcg agctgctgaa catcttccag gccgacgccg tcggctgcca catcatcacg
    19141 gcgaccaacg acattctggc caagctcgcc ctggtcggga aggacctgca cgagtactcg
    19201 ctggataccg tgaagatgtt ccgcggcgac gcggtgaagg cgggattcga tctgtagcgc
    19261 cgcggctcac agtccgatcc cttcgtagcg cggcacgctg tctttggcca gcatccggcg
    19321 accgtccacg accagtggag gtcgcgggag cgcggcgata agctccggca gccgttcgaa
    19381 ctgtggccac cgggtcatga tcagcaccgc gctgacgttc tcgagcgacg actccaggct
    19441 gtccacgaat tccacccgcc cgccgaatac ctgctcggcc gccctccgag cgatcgggtc
    19501 gaaggccttc acgacggcgc ccgcgtcgag gagggattga gtgacggcca gtgccgggga
    19561 ctc
//
LOCUS       DASYRV010000399        10459 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2370700, whole genome shotgun sequence.
ACCESSION   DASYRV010000399 DASYRV010000000
VERSION     DASYRV010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10459
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2370700"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..875)
                     /gene="nadA"
                     /locus_tag="VGQ24_10785"
     CDS             complement(<1..875)
                     /gene="nadA"
                     /locus_tag="VGQ24_10785"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HEV8455371.1"
                     /translation="MSAPAAVANGRTAGLQLPVIEASGETPEQVEALQAEIRRLARSR
                     NAVVLAHNYQRPEVQDVADYVGDSLGLSRQAAATAAEVIIFCGVHFMAETAAILSPKK
                     RVLLPDLRAGCSLAATITAEDVRRWKAQFPGYIAVGYVNTTAEVKAELDYCCTSGNVL
                     DVVDAIPADLGILFLPDFFLGSHVRRMRPERRIEVWMGECHVHKGIRPEVLNEARATY
                     PDAEVLVHPECGCAGQLIYSMGLGDIDPEGLHIASTEGMIRKVTERPAQRFIVATETG
                     IIHRMQQVAPQKQFIP"
     gene            complement(872..2374)
                     /locus_tag="VGQ24_10790"
     CDS             complement(872..2374)
                     /locus_tag="VGQ24_10790"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: protein motif:HMM:NF005701.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008734 - L-aspartate oxidase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HEV8455372.1"
                     /translation="MATSRPVIVGTGIAGLWTAWRMASEGVSVILVTKESLADSASSW
                     AQGGIAVALGPGDSPSQHAADTLAASDGLADPEAVRILTSEGPDRIYELLAMGAIFDR
                     SPDGKLRLGLEAAHTQPRIIHSGGDRTGAALISCLAEVVRCLPEIQILEHTEVTSLLT
                     REGSVVGVGTLPRGGAGSSIGAPAVILATGGVGQLYAVTTNPKVATADGWALAHRAGA
                     QLRDLEFLQFHPTALKLPGVNPAPLISEAVRGAGAVLRDKSGKRFALDHDARGELAPR
                     DVVARAVAAADASGGAWLDAREVENFASRFPGITAMLARLGLDPARDPIPVAPALHYA
                     MGGIETDLEGRTTLTGLWAVGEVARTGVHGANRLASNSLLEGLVFADRAGRTITEALR
                     SAPPSPVVIEPGHREPDSGADAECEPIRQEMRNLMTADVGLQRSESSLLRAERELERL
                     SGATPPQAWRTHNQLLVAGLITHAARGRRESRGGHRRTDYPPPARKRKAV"
     gene            complement(2670..5327)
                     /locus_tag="VGQ24_10795"
     CDS             complement(2670..5327)
                     /locus_tag="VGQ24_10795"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEV8455373.1"
                     /translation="MRLLNRYILRQLAAPFFFALAAQTSLMLLSQVAKKFGALVGKGL
                     PWTVIGEVFLLSLPFIIAMTLPMAVLLAVLYTFSHLAADNEITATRASGISVYQVLAP
                     VLIWGVCMAALNFAFVDQVLPRTNARLRSLLIDIGRKKPTFELREQVINEVPPSQYFL
                     RASRIDAATGRLRGVTIYDVGGESSRRIIYADSGAMAYAEGQTDLSLRLYDGSIHQYR
                     PAEPARFQLTYFTINDIRVKNVFDELQRNTSESVRGDREMSTCEMLSVIRDAQEEQAE
                     ARRERAELVLYDLRVLLGQPPLPVTPPAPPDSVRRGYCGWLHSVLAALLPRTAEAEAA
                     AQGVSPKRSPPIRPAMRPRVKLSSWSEVASASDRVRDADRRADRYAVEVHKKWAISLA
                     CISFVIVGIVMALRFPRGGIGLVIGGGLLVFSIHYVGLTAGESLADRGFVSPWVAMWT
                     PNILLTVLGVLGLLKVSRESGSTRGGDFQELLDGLKHLLRRLLPLVRPLLPLVRFLSS
                     KLQRRRSGPGRRHLLRLSGLRQLDRYVIESWVRIFVLTALGFPLVSIVINLVDNLNKL
                     LDRGLSMKEIAISYIYSIPENAFLVMPAAVLFATVFTVGTMGRHSELTAAKAGGQSFH
                     RLMRPVFLAACAASALAFLVGELAPGATARQLEIQKAKQARPTRTRFNFVYRGDAGWV
                     YTIRSLDVSNRQLKQLMFERQGTGLSYPGLVLTADSASYDNKLKAWRLRSGASRVIAG
                     PGRQATFTFRTMRLNALRQSPADLLAEPKAPDEMRYAELGRYIDALKRSGNDANKLMV
                     DQALKLALPATCLIIALFGAPLAVTSPRAGAAVGIAISLGTTVVFLLVTQITKAVGAG
                     GVINPIVAAWFPNVVFLFAGLVLLAKVRT"
     gene            5419..>10459
                     /gene="sprA"
                     /locus_tag="VGQ24_10800"
     CDS             5419..>10459
                     /gene="sprA"
                     /locus_tag="VGQ24_10800"
                     /inference="COORDINATES: protein motif:HMM:TIGR04189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell surface protein SprA"
                     /protein_id="HEV8455374.1"
                     /translation="MARFPVALICLVTLPRVLAGQADSAPADTSAIGVRATFSVPPLQ
                     LREPQLLRATWLGAHRAPPALRAAAWDSTVAAVLDSARSERAAARRFMALYGAQAREG
                     PDEQGIPQRNRGVLGLSKKYADLALDGQVRFELRTDRLRNERCGPALLLDPNSGCRGG
                     FKPPRLDNQVNVRSSGILGRRVHVAVDYDTERDFSANNNIQVYYEGLEDEIIRRIEVG
                     TVTFRPPPSRFITAAIPANNFGVNASFEVGPFQFQTLAATQKGSQVANRVYTIGQTTS
                     QPQDRQVRDLDFETGRFFWVVDPTTALPGFPAIDILNLAGAAIAPTDQPAQVRVYRYR
                     PPQSGSGADPNLGGVTALARTIDPGQSFGPVRWQLLIQGTDYYLDPSGLWFALSTKLD
                     QNDYLAVSYTTAAGTTVGSFPSEDQGQGSSDSLRLVVEPKKGPEAVTFRHEMRQIYRV
                     GGTDLDAASLQVNLSVNRSERPQGAGTTYLALLGLAVATGQNVFDRENRLFPRTRDPD
                     ASEVLRESYIIFPSLTPFADPRLSAAERSDSLYRTPLYLLLAQGPPARFQVRMRYNSS
                     GAGDRSTLSLGALQIRDGSEQLMLGGRRLERGVDYTISYDLGQVTFLNPDALFGSTAG
                     QITARFEEQGLFAVAPTTILGLSTRYSLGEVGDINLIGMYQREQSAFNRPPLGFEASA
                     NLIGGINTALHFKPSGVSRLLSHLTTRPAVAPSLLDFNAEFAFTKPDPNRSGQAYVEE
                     FEAEAGIVLALRETSWQFASRPQQADGVEDLGFAGGFQPDDAVALTWQNLIPVAGSNQ
                     PLELRPEDIDTLIRISGRGEELETAMYLTLHADTAGGVVQQNNASRWSLPERLGTPRW
                     RSMVTSLSPTGVDLTRDEYLEFWVFQAGTRTADSAGVRLVFDLGTVNEDALGLAPDSI
                     TVAGADTVFTGRQSVGEGRLDTERNSIDIFDAQVDDTGILGDRPGVLIDGTTGAPVAD
                     LALCQRILGRAVPVFPWGDLSGRCTNGNGSLDTEDLNGDNVLNSSGASESVFRYVVSL
                     EPGDKYFVRNGVQRQDPDGSVSGWQLYRIPIRTPDATIGTPNLRLIQHLRLTVAAPDA
                     GQPDVVARFALARLRLVGSPWVRRAESPIAGISGSLGEPSGEVIASIVSTEHRTDLGY
                     ESPPGVIESVSRRGGDRSTLGTQINEKSLRLIARGLEPGERAEAYLRFPAGPQNVLGY
                     RALRVWMRGRGAEWDAGDYQAFIKLGSDDRNFYLYRAPARSVSWEPEFVIEFEVWRRL
                     RAELESRWLSGAPPSGAAECGSLDPNAYVACDGPYVVHLADPGINPPNLAAVQEVSAG
                     IIRVAGSAPEAELWVDDIRLSSPVSEMGTALAMDTRLVASDVGSINAAYIRQDGQFHQ
                     INSDPTYRTTGTLQVNTNWRLDRFLPPSLGLSVPLTVSYNRSDVSPQLLTGTDIRGDA
                     LEGLRKPQAWSASYNLAIRRSQTGSNWLVRGLVDPFSVAAVLTQGRSRTELSDANSDA
                     YSVVLGYALQLPRRGPRLPFGGLVSKLPKWLRESEGGKALANATFSPAPSSIRWSSGI
                     SRDKADYSLFSVPVVRPADPTVRPTLSLTHLWRNSGGLTWQPLGMLSLNGDLTSTRDL
                     RVYPDSTSLGRLAYAERRFLLGVPIGVERDRVLTTSLALTPRLSSWLRPRFTTSSNFL
                     LSRTLTSRSPVQ"
BASE COUNT         1762 a         3533 c         3398 g         1766 t
ORIGIN      
        1 gggataaact gtttttgggg cgcgacctgc tgcatgcggt ggatgatccc ggtctcggtg
       61 gccacgataa agcgctgggc cggccgctcg gtgactttcc ggatcatccc ctcggtcgag
      121 gcgatgtgaa gcccctcggg atcgatgtcg ccgagtccca tgctgtagat cagctgcccc
      181 gcgcagccac actcgggatg caccagcacc tcggcatcgg ggtacgtggc acgtgcttcg
      241 ttcagtacct ccggccggat ccctttgtgc acgtggcact cccccatcca gacctcgatg
      301 cggcgctcgg gtcgcatccg tcgcacgtgg ctgccgagga agaagtcggg caggaagagg
      361 ataccaaggt ccgccggaat ggcgtcgacg acgtcgagca cattgccgct ggtgcagcag
      421 tagtcgagct cggctttgac ttcggccgtg gtgttgacgt agcccacggc aatgtagccg
      481 gggaactggg ccttccagcg gcgcacgtct tcggccgtga tcgtcgccgc gagcgagcac
      541 cccgcacgaa gatcgggcag cagcacccgc ttcttcggcg agagaatggc cgctgtttcg
      601 gccatgaagt ggacgccgca gaaaatgatg acctcggccg cggtcgcagc cgcctgccgt
      661 gacaggccaa gcgagtcccc gacgtagtcg gcgacatcct ggacctcggg ccgctggtag
      721 ttgtgcgcca gcacgaccgc gttccgggat cgtgccagac ggcggatctc cgcctgaagg
      781 gcctcgacct gttcgggcgt ctctccggat gcctcgatga cgggaagctg cagcccagcc
      841 gtccttccgt tcgccaccgc cgcgggtgcg ctcatactgc cttccgcttg cgggccggtg
      901 gcggatagtc tgtcctccgg tgcccgccac ggctctctct ccggccccgc gccgcgtggg
      961 tgatcagccc ggctacgagc agctggttgt gcgtccgcca cgcctggggc ggtgttgcac
     1021 cgctgagtcg ctccagctct cgctcggccc gcagcagcga cgactcgctc cgctgaagcc
     1081 cgacatcggc tgtcatgagg ttccgcatct cctgccggat gggctcgcac tccgcatcgg
     1141 cgccgctgtc cggctcgcga tgcccaggct cgatgaccac gggagatggg ggggcggagc
     1201 gcagcgcttc cgtgatggta cgacccgccc ggtcggcaaa caccaggccc tcgagcaacg
     1261 agttcgacgc gagccggttg gcaccgtgga ccccggtgcg cgcgacctca cctaccgccc
     1321 agagtcctgt cagcgtcgtt cgcccctcga gatcggtctc gattccgccc atagcgtagt
     1381 ggagagccgg tgcgaccgga atcgggtccc gagccggatc caggccgagc cgagccagca
     1441 tggctgtgat gccgggaaac cgggacgcga agttctcgac ctcgcgggca tcgagccagg
     1501 ctccgccgga tgcgtcggcc gccgccacgg cccgggcaac gacgtcccgc ggggcaagct
     1561 cgccgcgcgc atcgtggtcc agcgcgaacc gcttccccga tttgtcgcga aggacggctc
     1621 ccgcaccccg caccgcctcg gagatcaatg gtgcgggatt gacgcccggc agcttcaacg
     1681 cggttggatg gaattggagg aactcgagat cacggagttg cgcaccagct cggtgagcca
     1741 gggcccatcc gtcggccgtg gcgaccttgg gattcgtggt gacggcgtac agctgcccca
     1801 cgccgccggt ggcgaggatt actgccggtg ccccaatcga ggagcctgcg ccgccacggg
     1861 ggagggtgcc aacacctacc acactgcctt cacgagtcag aaggctggtg acctccgtgt
     1921 gctccaggat ctgaatctcg ggaagacacc ggaccacttc ggccaggcag ctgatcagtg
     1981 ctgccccggt tcggtcaccg ccggaatgga tgatccgtgg ctgggtatgg gcggcctcga
     2041 gcccgagacg gagcttgccg tcggggctgc ggtcgaagat cgcgcccatt gccagcagct
     2101 cgtaaattcg gtcgggacct tcgcttgtga ggattctgac ggcttcggga tcggccagcc
     2161 cgtcgctggc cgcaagggtg tcggccgcgt gctggctggg gctgtcacca ggtccgagtg
     2221 ctaccgcgat gccgccctgg gcccatgagc tggcgctgtc cgccaggctc tccttggtga
     2281 cgagaatgac ggagacaccc tcggatgcca tccgccatgc cgtccaaagg ccggctattc
     2341 cggtgcctac gatgacgggc cgcgaggttg ccatgcaatc aaatatacag gacactccgg
     2401 tccggaggac cgatgatgcc caagaggccg gccctcatgg gccggctggg ccgcgggccc
     2461 acatgatcaa aaacgaagcc cgcgtagcgg gcgttggcgt ggatagccgt acggatgtgt
     2521 catgaaataa atatgccggc cgatcggccg gcttatgcat cattgatgcg cttcgacgcg
     2581 cacccagccc atgagggccg ggctcttgat tggggcggtc ccttcgcttc gctcagggca
     2641 ggctctccgg accgcgggcg tttggccctc tatgttcgaa ccttggccaa caacaccaac
     2701 cccgcaaaca ggaacaccac gttggggaac cacgcggcca cgatcgggtt gatcacgccg
     2761 cccgcaccga cagccttggt aatctgggtg accagcagga agacgaccgt cgtgcccagg
     2821 ctgatggcga tgcccaccgc ggcaccagcc cgcggcgacg tgaccgcgag cggagcgccg
     2881 aatagagcga tgatcaagca ggtggcaggg agcgccagct tcagcgcctg gtccaccatg
     2941 agtttgttcg cgtcgttccc ggagcgtttc agcgcgtcga tgtagcgacc cagctcggcg
     3001 tagcgcatct cgtccggagc cttcggctct gccagcaggt ccgcggggga ctgccggagc
     3061 gcgttgagcc gcatcgtgcg gaaggtgaag gtggcctgcc ggcccgggcc cgcaatcacc
     3121 cggcttgccc cgctccgcag gcgccacgcc ttgagcttgt tgtcgtaact tgcgctatcc
     3181 gcggtgagga ccagtcccgg gtaggacagc ccggttccct ggcgctcgaa catgagctgt
     3241 ttgagttgcc ggttgctcac gtcgagcgag cggatggtgt agacccaccc cgcatcgccc
     3301 cggtacacga agttgaatcg cgtgcgggtc ggccgggcct gcttggcctt ttgaatctcc
     3361 agctggcgcg cggtcgcgcc cggtgccagc tcccccacca ggaaggccag tgccgaagcc
     3421 gcacacgcgg caaggaacac cggtcgcatc agccggtgaa agctttgacc gccggccttt
     3481 gccgcggtca gctccgagtg ccgtcccatg gtcccgacgg taaacacggt ggcaaacaac
     3541 accgccgccg gcatgaccag gaaggcgttc tcggggatgg agtagatgta gctgatcgcg
     3601 atctccttca tgctcaaccc gcgatcgagc agcttgttca ggttgtcgac gagattgatc
     3661 acgatcgata ccagcggaaa cccgagcgcg gtgagcacaa agatccgcac ccagctctcg
     3721 atcacgtaac gatcgagttg ccgcagcccg ctcagccgca gaaggtgcct tctcccgggg
     3781 ccgctccgcc ttcgttggag cttggagctc aggaatcgaa ccaggggcag caggggacgg
     3841 accagtggca gcagccgtcg gagcagatgc ttgaggccgt cgagcaactc ctggaaatct
     3901 ccgccccggg tggagcccga ttcccggctc accttgagca gtcccagcac cccgagcacg
     3961 gtgagcagga tattcggcgt ccacatggcc acccagggag agacgaagcc ccggtcggca
     4021 aggctttccc ccgcggtaag ccctacataa tgaatggaga ataccagaag cccgccgccg
     4081 atcaccagcc cgataccgcc ccggggaaac cggagcgcca tcacgatacc gacaatcacg
     4141 aacgagatgc aggccaggct gatcgcccat ttcttgtgca cctcgaccgc atagcggtcg
     4201 gcccggcggt cggcgtctct gacccggtcg ctggcgctgg ccacctccga ccagctggaa
     4261 agcttcaccc tcggccgcat ggctggccgg atcggaggcg accgcttcgg ggaaacccct
     4321 tgtgcagccg cctcggcctc tgccgtcctc ggaagaaggg ccgcgagcac tgagtgtagc
     4381 cagccgcaat acccccgtcg caccgagtcg ggtggagcag gtggggtgac cggaagggga
     4441 ggctgtccca ggagcacacg caggtcgtag agaaccagct cggcacgctc gcgccgggcc
     4501 tccgcctgct cctcttgggc gtcgcgaatg acgctgagca tctcgcaggt gctcatctcc
     4561 cggtcacctc tcaccgactc gctggtgttc cgctgcagct catcgaacac gttcttcacc
     4621 cggatgtcgt tgatcgtgaa gtaggtgagc tgaaaccggg cgggctcggc gggacgatac
     4681 tggtgaatgg acccgtcata caggcgcaag ctgagatcgg tctgcccctc tgcgtacgcc
     4741 atcgcgccgc tgtccgcgta gatgatccgg cggctcgatt cgcctcccac gtcatagatc
     4801 gtgaccccgc gcaagcggcc ggtggcggca tcgatccggc tcgcccggag gaagtactgg
     4861 gacggaggca cctcgttgat cacctgctcg cggagctcga aggtcggctt ctttctcccg
     4921 atatcgatca gcaacgaccg gagccgcgcg ttggtccggg gcaggacctg atccacaaag
     4981 gcgaagttca gcgcggccat gcacacgccc cagatcagca caggggccag cacctggtac
     5041 acgctgatcc cgctggcccg ggtggcggtg atctcgttgt cggcggcgag gtggctgaag
     5101 gtgtagagca cggccagcag cacggccatg ggcagggtca tggcgatgat gaacggcagg
     5161 ctcaggagga aaacctctcc gatgacggtc cagggcaggc ccttgcctac cagggcgccg
     5221 aatttcttgg ccacctggct caggagcatg aggctggtct gggcagccaa cgcgaaaaag
     5281 aagggtgccg ccagctggcg caggatgtag cgattgagca ggcgcaagtc agctaactta
     5341 tatggttgta agggtttcgt gggcccatta tatttgccga tccactactc caaagcccta
     5401 tcgttgtgtt cccgtagagt ggcgcgcttt cccgtcgccc tgatctgcct cgtcacactt
     5461 ccgagggtcc tggccggcca agccgattcg gctccagccg acaccagtgc catcggggtg
     5521 cgggcgacct tctccgtccc gccgctccag cttcgggagc cgcaactgct ccgggccacc
     5581 tggctggggg ctcaccgcgc tccgcccgcc ctgcgcgccg ctgcctggga cagcacggtc
     5641 gctgctgtgc tcgattcggc gaggagcgag cgggccgccg cgcgtcgatt catggccctg
     5701 tacggagcgc aggctcgaga aggtcctgac gagcagggaa ttccgcagcg gaaccgcggt
     5761 gtcctcgggc tctccaagaa gtatgccgac ctcgccctcg acggccaagt cagattcgag
     5821 ctccgaaccg accgacttcg aaacgaacgc tgcgggccgg ccttgctgct ggatccaaac
     5881 tccggctgcc ggggcggctt caagccaccc cggctggaca accaggtgaa cgtgagatcc
     5941 agcggaattc tcgggcgacg ggtccacgtc gcagtggact acgacaccga acgggatttc
     6001 tcggccaata acaacattca agtctactac gagggactcg aagacgagat catccggcgg
     6061 atcgaggtcg gcaccgtcac cttccggcct cccccctccc ggttcatcac cgctgccatc
     6121 ccggccaaca acttcggcgt caacgccagc ttcgaggtag gtccgttcca gttccagacc
     6181 ctggcagcca ctcagaaggg cagccaagtg gccaaccggg tctacaccat cggccagacc
     6241 acgagccagc ctcaggatcg tcaggtacgg gacctcgatt tcgagaccgg ccgcttcttc
     6301 tgggtggtgg atccgaccac ggctttgccg ggctttccgg ccatcgacat tctcaatctg
     6361 gccggcgcag ccatcgcccc caccgaccag ccggcccagg ttcgggtcta ccgctatcgg
     6421 ccgccccaga gcgggagcgg agccgatccc aacctcggcg gggtcaccgc tctggcccgc
     6481 accatcgacc ccgggcagag cttcggcccg gtgcggtggc agctcctgat ccagggtacc
     6541 gactactatc tggatccgtc gggcctctgg ttcgccctct cgacgaagct cgatcagaac
     6601 gactacctgg ccgtgagcta taccacggcg gccggaacga ccgtcggaag cttcccgtcg
     6661 gaggatcaag gccagggctc cagcgatagt ctccgtctcg ttgtggagcc gaagaagggc
     6721 ccggaggcgg tgacctttcg ccacgagatg cgccagatct atcgggtggg gggaacggat
     6781 ctcgatgctg catcgcttca ggtcaacctg tccgtcaacc ggtccgagcg gccccagggc
     6841 gccggcacga cgtacctggc actgcttggg ttggccgtgg caaccggtca gaatgtcttc
     6901 gaccgcgaga accgtttatt cccccgcacc cgggaccccg acgcctccga ggtcctgcgc
     6961 gaatcgtaca tcatcttccc cagcttgacc ccgttcgcgg atccacgcct gagtgcggcc
     7021 gagcgctccg actccctcta ccgcactccg ctctacctcc tgctcgcgca gggaccaccg
     7081 gcccgattcc aggtcaggat gcgctacaac tcgagtggcg cgggcgaccg atccaccctc
     7141 agccttggcg cactacagat tcgggacggc agcgagcagc tgatgttggg ggggcggcgc
     7201 ctggaacgcg gcgtggacta cacgatctcc tacgatctgg ggcaggtcac cttcctcaat
     7261 cctgacgcgc tgttcggaag cacggcaggc cagatcaccg cgcgtttcga ggagcaaggg
     7321 ctgttcgccg tggcgccgac gaccatcctc ggcctgtcca cccgttacag cctcggtgag
     7381 gtgggcgaca tcaacctcat cggcatgtac caacgggagc agagtgcctt caaccggccg
     7441 ccactcggct tcgaggcttc ggccaacctg atcggcggca tcaatacggc gcttcacttc
     7501 aagccgtcgg gcgtgagccg cctgctcagc cacctgacca cccgccccgc ggtggctccg
     7561 tctctcctcg atttcaacgc ggagtttgcg ttcaccaagc cggaccccaa ccgttcggga
     7621 caggcgtacg tcgaggaatt cgaagccgag gcggggattg tgctggcgct ccgcgagacc
     7681 tcgtggcagt tcgccagccg gccgcagcag gccgacgggg tggaggacct cggatttgcc
     7741 ggcggcttcc agccagacga cgccgtcgca ttgacctggc agaaccttat accggtcgcg
     7801 ggcagtaatc agccactcga gctccggccg gaggacatcg acacgctgat ccggatctcg
     7861 ggaagggggg aagagctcga gaccgcgatg tacctcacgc tccacgccga cactgcgggc
     7921 ggggtggtgc agcagaacaa tgcctcccgc tggtcactcc ccgaacggct ggggacccca
     7981 cggtggcggt cgatggtcac ctcactcagt cccaccggtg tggacctcac ccgcgatgag
     8041 tacctggagt tctgggtgtt ccaagcggga acccgcaccg cggattcggc cggagtccgg
     8101 ctggtcttcg acctgggtac cgtgaatgag gatgcgctgg gcctggcgcc cgacagcatc
     8161 acggtcgccg gcgcggacac ggtcttcacc ggccggcagt ctgtgggcga aggccggctc
     8221 gataccgagc gcaacagcat cgacatcttc gacgcgcaag tggacgacac cggaatcctg
     8281 ggtgaccggc ccggggtcct gatcgacggg acgactggag cgcccgtggc cgatctcgcg
     8341 ctttgccagc ggatcctggg ccgagctgtt cccgtgtttc cctggggcga tctcagcggc
     8401 cggtgcacca acggaaacgg cagcctggat accgaggacc tgaacggcga caacgtgctc
     8461 aactcctcgg gagccagcga gagcgtcttc cgctatgtcg tcagcctcga gccgggagac
     8521 aagtatttcg tccgcaacgg ggttcagcgg caggaccccg atggaagtgt gagcggatgg
     8581 cagctctacc gtattccgat ccggacaccg gacgcgacga tcggcacgcc taacctccgc
     8641 ctcattcaac atcttcgcct caccgtggcg gcccccgatg ctggtcagcc ggatgtcgtc
     8701 gcccgttttg ctctggctcg tctccggctg gtgggctctc cctgggtgcg gcgggccgag
     8761 tcacccatcg cggggatctc cggatccctc ggtgagccca gtggcgaggt gatcgcgtcg
     8821 atcgtttcta cggaacaccg caccgacctc gggtacgaat ccccgcccgg tgtcatcgag
     8881 tcggtgtccc ggcgcggcgg cgatcgcagc accctcggca cccagatcaa cgagaaatcg
     8941 ctccggctga tcgctcgcgg gctcgagccc ggcgagcgcg ccgaggcata cctgcgcttc
     9001 ccggcgggcc cccagaacgt tctcgggtac cgtgcgctcc gggtctggat gaggggccgg
     9061 ggagccgagt gggatgccgg cgactatcag gcgttcatca agctgggcag cgatgaccgg
     9121 aacttttacc tctatcgtgc gccggcccgc agcgtgtcct gggagccgga gttcgtcatc
     9181 gagttcgagg tctggcggcg gctccgggcc gagctggaga gccgctggct cagcggcgca
     9241 ccaccctccg gcgcggccga gtgcgggagt ctcgacccga acgcgtatgt cgcctgcgat
     9301 gggccgtacg ttgtccacct ggcggatccg ggaatcaacc cgcccaacct ggcggcagtg
     9361 caggaggtgt ccgccgggat aattcgggtg gccggttcgg ccccggaggc ggagctgtgg
     9421 gtggacgaca tccgcctcag cagcccggtg tcggagatgg gaacggcgct ggccatggat
     9481 acccgcctcg tcgcctccga cgtgggcagc atcaacgccg cctacatccg gcaggacggc
     9541 cagttccacc agatcaatag cgacccgacg taccgcacga ccggcacgct acaggtcaac
     9601 accaactggc ggctcgatcg gtttcttcca ccatcccttg gcctgtcggt ccccctcacc
     9661 gtctcctata accggagtga cgtgagcccg cagctgctca ccgggaccga cattcgaggc
     9721 gacgcactgg agggacttcg gaagccgcag gcctggagcg ccagctacaa cctggccatc
     9781 cgccgaagtc agactggcag caactggctg gttcgcggtc tggtagatcc gttttcggtg
     9841 gccgcggtgc tgacccaggg ccggtcccgt acggagctgt cggacgcgaa cagcgacgcc
     9901 tactccgtag tgctgggcta cgccctgcag cttccccggc gggggccgcg actgccgttc
     9961 ggcgggttgg tgagcaagct gccgaagtgg ctgcgagaga gcgagggtgg aaaggcgctc
    10021 gcgaatgcga cgttcagccc ggcaccgtca agcattcgct ggagcagcgg aatctcgcgg
    10081 gacaaggcgg actattctct gttctccgtg ccggtggttc ggccggctga tcccacggtc
    10141 cgtccgacgc tctcgctgac ccatctgtgg cgcaactccg gtggcctgac ctggcagcca
    10201 ctgggcatgc tttctctcaa tggcgacctg accagcaccc gcgatctccg ggtctatccc
    10261 gactcgacct cgctcggacg cttggcctat gccgagcgcc gcttcctctt gggagtgccg
    10321 atcggggtgg agcgcgaccg ggtcctcacg accagcctcg cacttacgcc gaggctgagc
    10381 tcctggctcc ggccccgatt cacgacctcg agcaactttc tgctctcccg cacgctgacc
    10441 agccgctctc cggtgcagg
//
LOCUS       DASYRV010000400        10264 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3686461, whole genome shotgun sequence.
ACCESSION   DASYRV010000400 DASYRV010000000
VERSION     DASYRV010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10264
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3686461"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1468)
                     /gene="secD"
                     /locus_tag="VGQ24_10805"
     CDS             complement(<1..1468)
                     /gene="secD"
                     /locus_tag="VGQ24_10805"
                     /inference="COORDINATES: protein motif:HMM:TIGR01129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEV8455375.1"
                     /translation="MFSTIRSRLLLIAVLVLASVYFLFPRNITIREPGPNGVMHDVEV
                     TRVPLKRGLDLQGGMHLALELDQSKQVSADPKKDLDLALTVLRKRIDEFGVEEPVVQK
                     IGDNRIVVELAGITDPARAKAIVQRSAFLEFKITDETGSLEKALPAMDRTLRNLGIKG
                     EPQPTKPSAVQQLLGGDSIRPGAKDSTPAGGKKPARARTKDSARAGAADTAAAADTAP
                     IVGGILSGLIQPAGAGGVPGEYLVPETAYPRVDSLLSIPAVARQLPRGIVLRWSSAPS
                     SVGVQPVRFLYALDDKSIVTGSNLVDAQAQLDPLTNGPIVTFELDRAGGRKFGEQTGK
                     HVGDYMAILLDGRVQGRPPVIQSRIGRNGQITLGGKTLQEAQDLALTLKAGALPIPLK
                     IVEERQVGASLGSDSIHKGITAGLVGTALVILIMLGFYRLSGVLAVLALGLYILFTLG
                     ALSMVNATLTLPGLAGIVLSIGIAVDANVLIFERIREEL"
     gene            complement(1483..2409)
                     /locus_tag="VGQ24_10810"
     CDS             complement(1483..2409)
                     /locus_tag="VGQ24_10810"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: protein motif:HMM:NF004160.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEV8455376.1"
                     /translation="MPNGATVTVGSFDGVHLGHQAVLREIDRRAREAGRASVLVTFDP
                     HPLEVVNPDAAPPLLTTGPERLEILAQSPLDYVVILRFDRHLAGLSPEGFVREVLLER
                     CAVRELVIGHDHGFGRGRSGDVATLRTLGDRLGFAVDVVDPVDFGGQHISSSRIRRAV
                     AGGDLTSAAAMLGRPYGVVGRVGQGEQRGRLLGVPTINLSELSPRKLLPPDGVYAVRV
                     EWRGGGAGGMMNQGPRPTFQDGRRILEAHIFDFEGDLYGEWVRIEWVERLRDVERFES
                     LEHLQKQLQQDRTRALAVLGRPQSPVSRVSHT"
     gene            complement(2472..3326)
                     /gene="truB"
                     /locus_tag="VGQ24_10815"
     CDS             complement(2472..3326)
                     /gene="truB"
                     /locus_tag="VGQ24_10815"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEV8455377.1"
                     /translation="MDKPAGKTSHDIVQHVRRALGVRAAGHTGTLDPFATGLLVVLVG
                     RATRLARFVEAQPKTYVATARLGIRTTTDDLTGEMIGSESSGLLPESLVRDTLAEFLG
                     LQAQRPPQFSAKRVGGERSYRKARRGETVELADVDITVHAITLVAYRPPEFDFRVTVS
                     PGTYVRAIARDLGERLGVGSHLTRLRREAIGSLRVEDAVSLERLSATALLPARRVLAD
                     LPVVELDEAGRNDVAHGRAVVDSGAAGRLGSGAAVAEVALLAAGELVAMARAENGWLH
                     PTVVLVDR"
     gene            complement(3341..3700)
                     /gene="rbfA"
                     /locus_tag="VGQ24_10820"
     CDS             complement(3341..3700)
                     /gene="rbfA"
                     /locus_tag="VGQ24_10820"
                     /inference="COORDINATES: protein motif:HMM:TIGR00082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEV8455378.1"
                     /translation="MKGSSRRPEQVGETLRQVITDALARQVRDPRVGFVTVTAVLVSN
                     DLSHARVMVSVPGEDAAKSRALEGLQSAAGFLRSRAAKSLTTRSVPALHFELDRGLQH
                     AARINELLNTIRREGQD"
     gene            complement(3697..3993)
                     /locus_tag="VGQ24_10825"
     CDS             complement(3697..3993)
                     /locus_tag="VGQ24_10825"
                     /inference="COORDINATES: protein motif:HMM:NF016351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF503 domain-containing protein"
                     /protein_id="HEV8455379.1"
                     /translation="MRLATMFLAITTWDLHLPACHSLKEKRGVLRPLTVGLRRTLNVS
                     VAETGHQDLWQRAEIACAAVGSARPVVEETLRAADRLVEETDGVRIVDTVTVFR"
     gene            complement(4043..6754)
                     /gene="infB"
                     /locus_tag="VGQ24_10830"
     CDS             complement(4043..6754)
                     /gene="infB"
                     /locus_tag="VGQ24_10830"
                     /inference="COORDINATES: protein motif:HMM:TIGR00487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEV8455380.1"
                     /translation="MVKTRVHDLAAEFGVAPEQLLSMLKDMNIFVRSHLSALESDQVS
                     AVRVRWEREKRRSAEEPAAKKGRRKAVKAEPVPVAAEAKPTKRRRTAAEVAQVEAQVQ
                     AEKAAEMAALELERPVLPEPEEAVPAQSLEERARALFKDLPPAPSVEEGEVATEEEAV
                     NGGAPEAPLFRPSPPPASVSRAPFIPPRVQRPAPAAPRGPKPVFSSSAPASPARPAGG
                     PSRPGMPSRPGGDRNAPPVRTFGPDAEKGGGRKKGKKGKRSSVDQEAVHANILRTLQG
                     MKGPAGRKGRRSDEPSFRDVQAGRMAEEREREKTLIRVNEFVSVSELAGAMKVPATQI
                     VQFAFKELGLMVTVNQRLDFDQIELIASAFGFQAVKEDEYAAEAELDQTVENPEQLVS
                     RPPVVTIMGHVDHGKTSLLDYIRKANIVAGEAGGITQHIGAYHVELPGEKRITFLDTP
                     GHQAFTAMRARGAQVTDIVVLVVAADDQVMPQTIEAISHARNAGVPMIVAINKIDLPT
                     ANVPKVKQDLLQQNVVLEEFGGTVLSAEISAKRGTGIEHLLEQILLQAEILDLKANPS
                     GKGHGTVLEASLDPGKGPLATILVQRGTLVGGDNFICGRFSGRVRALYDERGKTVKEA
                     GPSIPVQILGFEGVPAAGDIFAVVTDAVEARDIAQKRQRLEREAQNRRSAKGTSLEDF
                     SRALKEGEVTMLRIIIKADQGGPAEALADALAQLSTSEVRVDVVHRGVGAITESDILL
                     AKASGAIVLGFHVRPDSNARAAAEREQVDVRTYRIIYEAVEDVRNALEGLLKPEERET
                     VLGDAEVLQLFKVSKVGTIAGCIVRSGTIQRTAKARVVRDGTAVYTGALSSLKRFKDD
                     VKEVREGLECGIGIENFNDLKVGDRVESFRMEEIKRTLAPAASGAAG"
     gene            complement(6754..7071)
                     /locus_tag="VGQ24_10835"
     CDS             complement(6754..7071)
                     /locus_tag="VGQ24_10835"
                     /inference="COORDINATES: protein motif:HMM:NF013417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal L7Ae/L30e/S12e/Gadd45 family protein"
                     /protein_id="HEV8455381.1"
                     /translation="MSGLLGLLGLGYRGRRVVVGVEAVRRELQSGKCWCVVVAEDASP
                     RTLEKVVRLATAKGVPLLPGPRAAAIGAQLGKPPVMAVGVRDRALAGGMVQLAPGRSG
                     WRH"
     gene            complement(7068..8390)
                     /gene="nusA"
                     /locus_tag="VGQ24_10840"
     CDS             complement(7068..8390)
                     /gene="nusA"
                     /locus_tag="VGQ24_10840"
                     /inference="COORDINATES: protein motif:HMM:TIGR01953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HEV8455382.1"
                     /translation="MAGSTEMLAAFRELTTAKQLERSDLLELLRDGIHAALVRKFGPN
                     VRFELSVDELQGTIKVVRLRQVVETVEDPSWQITLEEAQYEDPDFAVGDMLEEEVPFV
                     EFGRLAVQAAKQRIIQRVREGERARIREEFTSKVGELLSGEVQQIERGKLVIMLNKFR
                     EAEAIVPYREQNHREHFHQGDTIRAVLKRLEETPKGPRLILSRGDPLFVKALFKLEVP
                     EIQQQVVEIRAIAREVGSRTKVAVISRDDAIDPVGACVGLKGSRVQAVVNELGGERID
                     IVPWSPDPERFARLALAPARVAKVFSDPEAKTIQAVVDEDQLSLAIGRNGQNVRLASE
                     LTGWKIDLYSSREWLERGGEGPLFAPLPPEEEMAGKVPLAELKGLSPDLTGILETAGY
                     KMLNDILDLEREDIAKIPGMTPETADQLLAFLSELTDEDGGEESRPKT"
     gene            complement(8395..8940)
                     /gene="rimP"
                     /locus_tag="VGQ24_10845"
     CDS             complement(8395..8940)
                     /gene="rimP"
                     /locus_tag="VGQ24_10845"
                     /inference="COORDINATES: protein motif:HMM:NF014617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000028 - ribosomal small subunit assembly
                     [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0042274 - ribosomal small subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEV8455383.1"
                     /translation="MFSGFDVGEFPHIFFPSPPMSADAFLAPIRDHVTGLGFELVDLR
                     RTGTLQRPILQVRVDRPDSRPGQGVTADDCAAISRSLERFLESSAMVGPRYVLEVSSP
                     GFERPLRWPEHWRRFVGRHARVRAAPLPGRNRVEIIAVPDDEHVVLRREDGSEVTLAF
                     EAIREATLVTESEVLGKRSRG"
     gene            complement(9074..9913)
                     /locus_tag="VGQ24_10850"
     CDS             complement(9074..9913)
                     /locus_tag="VGQ24_10850"
                     /inference="COORDINATES: protein motif:HMM:NF014619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase family protein"
                     /protein_id="HEV8455384.1"
                     /translation="MGRGGEGGKRGSGKAEAAHSTIVRETPIPGAIPRFEIPGWGERY
                     GVIAGITARGADPDRGFDLGLWSKEPVGEVMSRWLAFRRVLPGFHAVALGNQMHGVEL
                     MSLDAGRGWIQVDGIDGWITTAPGILLTVTIADCVPVYLVAPGRGVALLHAGWRGTAG
                     RILARGIERLKAETGCLEAEIVMHCGVAICGACYEVGSEVMLGCGAPAEGDGPWHLDL
                     RERLVADASELGLTSISSSTWCSAHNRTSFYSHRASQGTDGRMAAYIGMLAGQRVGGA
                     AGQ"
     gene            complement(9906..>10264)
                     /locus_tag="VGQ24_10855"
     CDS             complement(9906..>10264)
                     /locus_tag="VGQ24_10855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEV8455385.1"
                     /translation="FPADLMSIAIVCATQCSGMILVFEKMFESRLFFVDKLIGMGARI
                     VLCDPHRAVISGPSPLKGGIVESPDIRAGMAMLLAALAAEGPSTIHNVGQIERGYERI
                     DERLRALGAEIERVDG"
BASE COUNT         1708 a         3591 c         3239 g         1726 t
ORIGIN      
        1 gcagctcctc ccgaatgcgc tcgaagatca ggacgttggc atcgactgcg ataccgatcg
       61 aaagcacgat cccagccaga ccaggcagcg taagcgtcgc attaaccatg gagagggcgc
      121 ccagggtgaa caggatatag agtccgaggg ccagcactgc caagaccccg ctcagccggt
      181 agaagccaag catgatcaga atgaccagag cggtgccgac gaggccggcg gtaatgccct
      241 tgtgaatcga gtcgctcccc aggctggcgc cgacctggcg ctcttcaacg atcttgagcg
      301 ggatcggcaa ggcgccggcc ttgagcgtaa gggcgagatc ctgagcctcc tgcagcgtct
      361 tgccgccgag ggtgatctgg ccgttccgcc cgatgcggct ctggatcacc ggcggacgcc
      421 cctgcacccg cccgtcgagc agaatggcca tgtagtcgcc cacgtgtttg ccggtctgct
      481 cgccgaactt gcgaccgccc gcgcgatcga gctcgaaggt gacgatgggg ccgttggtga
      541 gcggatcgag ctgggcctgg gcgtccacga gattgctgcc ggtgacgatg cttttgtcgt
      601 ccagggcgta caggaagcgg accggttgca ccccgacgct ggacggcgcg gagctccagc
      661 ggaggacgat gcccctggga agctgacgcg cgacggccgg aatgctcaac aggctgtcca
      721 ccctgggata tgcggtctcc ggcacgagat attcgcccgg gacgccaccg gcccccgctg
      781 gctgaatcag tccgctcagg attccgccga cgataggcgc ggtatcagct gcggcggcgg
      841 tgtcggctgc accggcacga gccgaatcct tggttctcgc acgggccggc ttcttgccgc
      901 ctgctggagt ggaatccttg gctcccggcc ggatcgagtc tccgcccagc agctgttgaa
      961 ccgcggatgg cttggtgggc tggggctcgc ctttgatccc caggttgcgc agggtccggt
     1021 ccatcgccgg gagcgccttc tccagcgatc cagtttcgtc cgtgatcttg aactcgagaa
     1081 atgcgctccg ctgcacgatg gccttggccc gggcgggatc ggtaatgccg gcgagctcca
     1141 ccacgatgcg attgtctccg atcttctgga ccaccggctc ctcgacgccg aattcgtcga
     1201 tccgcttacg cagcaccgtc agcgccaagt ccaaatcctt ctttgggtca gcggagacct
     1261 gcttggactg gtcgagctcg agggccaggt gcatgccacc ctggagatcg aggccgcgct
     1321 tgagcggcac gcgggtcacc tccacatcgt gcatgacccc gttcggaccc ggctcacgga
     1381 tcgtgatgtt ccggggaaag aggaaataca ccgacgccag gacgagcacg gcgatgagaa
     1441 gcagccggga acgaatggtt gagaacatcg ttgatcagac tctcaggtgt gggagacgcg
     1501 gcttaccggt gactggggtc ggccgagaac ggccagtgcc cgggtgcgat cctgttgcaa
     1561 ctgcttctgt agatgctcca gggactcgaa gcgttcgaca tcccgcaggc gctcgaccca
     1621 ttcgatccgc acccactcgc catacaggtc gccctcgaag tcgaagatgt gggcctcgag
     1681 tatgcggcgc ccgtcctgaa acgtcggtct gggcccctgg ttcatcatgc ccccggcgcc
     1741 tccgccacgc cactcgaccc gcacggcata cacgccgtcg ggtgggagca acttcctggg
     1801 cgacagctcg ctcaggttga tggtgggcac gccgagcaag cgtccgcgct gctcaccctg
     1861 ccctacccgg ccaaccaccc cgtaggggcg accgagcata gccgcggcgc tagtcagatc
     1921 gccaccggcg actgcccggc gtatccggct gctggagatg tgctggccgc cgaaatccac
     1981 cggatctacc acatcaaccg cgaacccaag ccggtctccc agggttcgga gcgtagccac
     2041 atcgccgctg cggcctcggc cgaagccatg atcgtgccca atcacgagct cccgcacggc
     2101 gcaccgttcg agcagcactt cgcgcacgaa cccttccggg ctgagccccg ccaggtgacg
     2161 gtcgaaccgt aggataacca cgtaatcaag cggggactgg gccaaaatct ccagtcgctc
     2221 ggggccggtc gtcaggagcg ggggtgccgc gtccggattc accacctcga gcggatgggg
     2281 atcgaaggtc actagaacac tggcccgccc ggcttcgcgc gccctgcgat cgatctcacg
     2341 gagaaccgct tggtgcccca gatgcacgcc atcgaacgaa ccaaccgtga cggtcgcgcc
     2401 gttcggcatg gggggcagcg gggcggcagg acgcgaacgc ggggccgcgg ggccgcgggg
     2461 ccgcggggca gtcacctatc caccagcact accgttgggt gaagccaccc gttctctgcg
     2521 cgcgccatgg ccactaactc cccggccgcc agaagcgcga cctctgccac tgctgccccg
     2581 ctgcccagcc gccccgccgc cccgctgtcc accaccgccc gcccatgtgc cacgtcgttg
     2641 cggcctgcct catcgagctc cactaccggc aggtcggcca gcacccggcg agccggtagt
     2701 agggccgtag cgctcagccg ctcgagactc acggcatcct ccacccggag ggaaccgatc
     2761 gcttcgcggc ggaggcgggt gaggtgcgag ccgacgccca gccgctcgcc caggtcccgg
     2821 gcgatggccc ggacataggt gccggggctg accgtgaccc ggaaatcgaa ctccggcggg
     2881 cggtaggcga ccagtgtgat tgcatggacc gtgatatcga cgtcggccag ctcgacggtc
     2941 tcacctcgac gagccttccg gtagctccgc tcgccgccca cccgcttggc cgagaactgg
     3001 ggcggccgct gagcctgcaa cccgagaaat tccgccaacg tgtcccgtac cagcgattcg
     3061 ggcagcagcc ccgacgactc ggacccgatc atctcaccgg tgagatcgtc ggtcgtggtg
     3121 cggattccca gccgagccgt cgcgacgtag gtctttggct gcgcttcgac gaaccgtgcc
     3181 agccgggtgg cgcgtccgac cagcaccacg agcaagccgg tggcaaaggg gtcgagtgtt
     3241 ccagtgtgac cggcggcccg aacgccgagc gcgcggcgca cgtgctgcac gatatcgtgc
     3301 gaggtcttcc cagccggctt gtccaccagc accgctccga tcagtcctgc ccctcccggc
     3361 gaatcgtgtt cagcagctcg ttgatccggg cggcgtgctg aagccctcgg tcgagctcga
     3421 aatgcagcgc ggggacggaa cgggtggtga gtgacttggc ggcacgggat cgaagaaagc
     3481 cggcggcact ctgcaggccc tcgagcgcgc gactcttggc ggcgtcctcg ccgggcacgc
     3541 tgaccatcac ccgggcatgc gagaggtcgt tgctcaccag cacggcggtt acggtcacga
     3601 atcccacccg tggatctcga acctgacgag ccagggcatc ggtaatgacc tggcgcaggg
     3661 tctcgcccac ttgctcgggc cggcgggatg accccttcat cggaacaccg tcacggtatc
     3721 gacgatgcgg acgccgtcgg tctcctccac caaccggtca gcggcgcgga gcgtctcctc
     3781 caccacgggg cgggcgctgc ccactgccgc acaggcgatc tcggctcgct gccacagatc
     3841 ctgatgtccg gtttcagcca ccgacacgtt gagcgtccgg cgcagaccca ccgtgagggg
     3901 cctgagcacg ccccgcttct ccttcagcga gtgacaggcg gggagatgga ggtcccaggt
     3961 ggtgatggcg aggaacatag tcgcaagtcg caagtcacca gtcgcgaatc aatggacttg
     4021 agactggcga ctggcgactc ctctaccccg cggcaccgct ggcggccgga gcgagcgtcc
     4081 gcttgatctc ttccatccgg aacgactcga cgcggtcgcc gaccttgagg tcgttgaagt
     4141 tctcgatgcc gatgccgcac tcgagcccct cgcgcacttc cttcacgtcg tccttgaacc
     4201 gcttcaggct ggagagcgcg ccggtgtaaa ccgcggtgcc atcccgaacg acacgtgcct
     4261 tcgcggtccg ctggatggtg ccgcttcgca cgatgcatcc cgcaatggtc ccgactttgc
     4321 tcaccttgaa gagctggagc acctcggcgt cgcccagcac cgtttcccgc tcttccggct
     4381 tgagcaggcc ttcgagcgcg ttccgcacat cctcaaccgc ttcatagatg atgcggtagg
     4441 tgcgcacgtc cacctgctcc cgctccgcgg ccgcacgcgc attggagtcg ggccgcacat
     4501 ggaagccgag cacgatggcg cccgaggcct tggccaacag gatgtcgctc tcggtgatgg
     4561 cacccactcc ccggtgcacc acgtcgaccc gcacctcgct ggtgctgagc tgtgccagcg
     4621 cgtcggccag cgcctcggca gggccgccct gatccgcctt gatgatgatg cggagcatgg
     4681 tgacctcgcc ctccttgagg gcacggctga agtcctcgag tgaggtgccc ttggcgctgc
     4741 gccgattctg ggcctcgcgc tcgagccgct gccgcttctg ggcgatatcc cgcgcctcga
     4801 ccgcatcggt gaccaccgcg aagatatccc ccgcggccgg cacgccctcg aagccaagaa
     4861 tctgcaccgg aatggagggt cccgcctcct tgacggtctt gccccgctcg tcgtacagcg
     4921 cacggacccg tccggagaat ctgccgcaga tgaagttgtc gccgccgacc agggtgccac
     4981 gctgcaccag gatcgttgcc aggggtccct tccccggatc gaggctcgcc tccaggaccg
     5041 ttccgtgccc cttcccgctg gggttggctt tcaggtcgag gatctcggcc tggagcagga
     5101 tctgctccag caggtgctcg atgccggtgc cgcgcttggc cgagatctcg gccgacagga
     5161 cggtaccgcc gaactcctcg agcaccacgt tctgctgcag caagtcctgc ttgaccttcg
     5221 gtacgttggc ggtcgggaga tcaatcttgt tgatggccac gatcatcggc acgccggcat
     5281 tgcgggcgtg gctgattgcc tcgatcgtct ggggcatcac ctggtcgtcc gcggcgacga
     5341 cgaggacgac gatgtcggtc acctgggcgc cgcgggcacg catcgcggtg aaagcctggt
     5401 ggcccggggt atcgaggaag gtgatcctct tctcacccgg cagctcgacg tgatacgcac
     5461 cgatgtgctg ggtgatgcct ccggcctctc cggcgacgat gttggccttg cggatgtagt
     5521 cgagcagcga ggtcttgccg tggtctacgt ggcccatgat cgtcacgacc ggtggccgcg
     5581 acaccaactg ctccgggttc tccaccgtct gatccagctc ggcctccgcc gcatactcgt
     5641 cttccttcac agcctggaag ccgaatgcgg aggcgatcag ctcgatctga tcgaagtcca
     5701 ggcgctggtt caccgtcacc atcaggccca gctccttgaa ggcgaactgg acgatctggg
     5761 tggcgggcac cttcatggcc ccggccagct cggagacgga gacgaactcg ttgacccgga
     5821 tcagggtctt ctcgcgctcg cgctcctccg ccatacggcc ggcctggacg tcgcggaacg
     5881 agggctcgtc gctgcggcgg cccttccggc cggccggacc cttcatcccc tggagagtcc
     5941 tcaagatgtt ggcatgcacc gcttcttgat ccaccgacga gcgcttcccc ttcttgcctt
     6001 tcttccggcc cccgcccttc tcggcgtcag gcccaaaggt gcgaaccggc ggagcattgc
     6061 ggtcgccgcc aggccgtgaa ggcatgccgg gtcgcgacgg cccgcccgct gggcgcgccg
     6121 gactggcggg tgcgctacta ctgaagaccg gcttggggcc acggggcgca gcgggcgccg
     6181 gccgctgcac tcggggcggg atgaacggcg ccctcgacac actcgccggc ggtggggacg
     6241 gtcggaagag gggcgcttca ggagcgccgc cgttgaccgc ctcctcctcg gtggcgacct
     6301 cgccttcctc cacggagggt gctggaggca gatccttgaa cagggcgcgg gcgcgctctt
     6361 cgagactctg ggcggggacc gcctcctccg gctctggaag aactggccgc tccaattcga
     6421 gtgccgccat ctccgccgcc ttctcggcct ggacctgggc ctcgacctgc gccacctcgg
     6481 ccgccgtgcg gcgccgtttg gtcggcttgg cttcggccgc cacggggacg ggttccgcct
     6541 tgacagcctt ccgccggcct ttcttggccg caggctcctc cgcactgcga cgcttctccc
     6601 gctcccagcg cacccggacc gcggagactt gatcgctttc caacgcggac aggtggctgc
     6661 gcacgaagat gttcatgtcc ttgagcatgc tgaggagctg ctcaggggcg acaccgaatt
     6721 cggctgccag atcgtggact ctcgttttaa ccactaatgc ctccatccgg agcgtccggg
     6781 cgccagctgc accatgccgc cggccaacgc gcggtcccgt acgcctaccg ccatcaccgg
     6841 cggtttaccc aactgcgcgc cgatcgcagc ggcacgcggt cccggcaata acggcacacc
     6901 cttggcggtg gccagccgga cgaccttctc gagggtgcgg gggctggcat cttcggccac
     6961 gaccacgcac caacacttcc ctgactgcag ctctcttcga accgcctcca ccccgaccac
     7021 gaccctccgc ccacggtagc ccaggccgag caggcccagt aacccgctca tgtcttgggg
     7081 cgcgattcct cgccaccgtc ctcgtccgtg agctcggaca ggaaggccaa cagctggtcg
     7141 gcagtttccg gggtcatacc ggggatcttg gcgatgtctt cgcgctcgag gtccaggatg
     7201 tcgttcaaca tcttgtagcc ggctgtctcg aggatgccgg tgagatcggg cgacaagccc
     7261 ttgagctcgg cgagcggaac cttgccggcc atctcttctt ccggcggcag cggagcgaac
     7321 agaggacctt cgccgccgcg ctccagccac tcgcggctgg agtagagatc gatcttccag
     7381 ccggtgagct ccgaggcaag ccgcacgttc tgtccgttgc ggccgatcgc cagcgacagc
     7441 tggtcttcgt ccaccaccgc ctgaatcgtc ttggcttcgg gatcagagaa taccttggcg
     7501 acccgggccg gcgcgagtgc gagccgggcg aaccgctccg gatccggtga ccagggcacg
     7561 atgtcgatgc gttcgccgcc cagctcgttc accaccgcct ggacccggga gcccttgagg
     7621 ccgacgcagg cgccgaccgg atcgatggcg tcatcccgcg agatcaccgc gaccttggtc
     7681 cggctgccca cctcccgcgc gatcgcccgg atctccacca cctgctgctg gatctcgggc
     7741 acctcgagct tgaagagcgc cttcacgaac agcgggtcgc cccgggacaa gatcagccgc
     7801 gggcccttcg gcgtttcctc caaccgcttg agcaccgcgc ggatggtgtc accctggtgg
     7861 aagtgctccc ggtggttctg ctcccggtag ggtacgatcg cctcggcctc gcggaacttg
     7921 ttcagcatga tgacgagctt gccccgctcg atctgctgca cctcgccgga gagcaactcg
     7981 cccaccttgg aggtaaactc ctcgcgaatc cgagcccgct caccctcgcg cacccgctgg
     8041 atgattcgct gcttggcggc ctgaaccgcg aggcggccga actccacgaa cgggacctct
     8101 tcctcgagca tatcgcccac ggcaaaatcg gggtcctcgt actgggcttc ttccagcgtg
     8161 atctgccagc tgggatcctc gactgtctcg accacctgac gaagccggac gaccttgatg
     8221 gtgccctgga gctcgtccac actcagctcg aagcgcacgt tggggccgaa cttccgcacc
     8281 agcgccgcat ggatgccatc acgcagcagc tcgaggagat cggagcgctc cagttgtttt
     8341 gcggtcgtca gctcgcgaaa cgcggccaac atctcagtcg aacctgccat ccattcaccc
     8401 cctactgcgt ttgcccagga cctcagactc cgttaccaac gtcgcctcgc ggatcgcctc
     8461 gaatgccagc gtcacttccg atccatcctc ccgccggagc accacgtgct cgtcatcggg
     8521 cacggcgatg atctcgaccc ggttgcgccc cggcagcggc gcggcgcgga cccgggcgtg
     8581 ccgtccgacg aaccgccgcc aatgctccgg ccaccggagc ggccgttcga accccggcga
     8641 cgagacttcc aacacgtaac gcgggccgac catcgcgctg gattcgagga atcgttcgag
     8701 tgaccggctg atcgccgcgc agtcgtcggc cgtcactccc tggccaggcc ggctgtccgg
     8761 acgatcgacc cgcacctgca agatggggcg ctgcagcgtt ccggtccgcc tgagatcgac
     8821 cagctcgaat ccaagcccgg tgacatgatc gcgaatcgga gccagaaacg cgtcggcaga
     8881 catcggcgga gaaggaaaaa aaatgtgggg gaactccccc acatcaaagc cggaaaacaa
     8941 acgacctccg ggacagcagg taaatattac tcgggaatca ggttggagtc aaataggtgg
     9001 ggcagcgggg cagatgggcg gcggggcagc caaaaagcta accaggacgc gtcgagcctt
     9061 acgaacgcgc ttactactgc cccgcggccc cgccgacccg ctgccccgcc agcattccta
     9121 tatacgccgc catccggccg tcggtgccct gggaggcgcg gtgactatag aaggaggtcc
     9181 ggttgtgagc cgagcaccag gtcgagctgc taatcgatgt caggcccagc tccgacgcgt
     9241 cggctacgag ccgctcccgc aggtcgaggt gccagggacc atcgccctcg gccggtgccc
     9301 cacagcccaa cataacttca gatcctactt catagcacgc cccacaaatc gcaacgccac
     9361 aatgcattac aatctcggct tccaggcatc cagtctcggc tttcaagcgc tctattccgc
     9421 gggcgagaat ccggccggcg gtgccgcgcc aacccgcatg caggagggcc acgccgcgtc
     9481 ctggggccac gagatagacc ggcacacagt cggcgatcgt caccgtgagc aggattccgg
     9541 gtgcggtggt aatccagccg tcgattccat cgacctggat ccagccgcgg cccgcgtcga
     9601 ggctcatgag ctcgaccccg tgcatctggt tgcctagagc aacagcgtga aacccgggta
     9661 gtactcgacg gaacgcgagc catcggctca tgacctctcc gaccggctct ttgctccaga
     9721 ggccgagatc gaagccacgg tcggggtctg cgccgcgggc ggtgatgccg gcgattaccc
     9781 cgtagcgttc cccccagccg gggatctcga atcgaggaat tgcacctggt atgggagttt
     9841 cgcggactat cgtggaatgt gcggcctctg ctttcccgct tccccgcttc cccccctccc
     9901 cacctctacc catccacccg ctcgatctcg gcccccagcg cccgcagccg ctcatcgatc
     9961 cgctcgtacc cgcgctcgat ctggcctacg ttgtgaatcg tgcttggacc ctccgcggca
    10021 agggccgcaa gcagcatggc catgccagct cgaatatccg gcgattcgac gatcccgcct
    10081 ttgaggggcg agggacccga gatcaccgct cggtggggat cacaaagcac gatgcgggcg
    10141 cccatcccga tcagcttgtc cacgaagaag agccgggact cgaacatctt ctcgaagacc
    10201 aggatcatgc cggagcactg cgtggcgcag acgatggcga tggacatcag gtccgctgga
    10261 aacg
//
LOCUS       DASYRV010000401         3018 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1406104, whole genome shotgun sequence.
ACCESSION   DASYRV010000401 DASYRV010000000
VERSION     DASYRV010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3018
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1406104"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1417
                     /gene="glgP"
                     /locus_tag="VGQ24_10860"
     CDS             <1..1417
                     /gene="glgP"
                     /locus_tag="VGQ24_10860"
                     /inference="COORDINATES: protein motif:HMM:TIGR02094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HEV8455386.1"
                     /translation="LHQELVLGVGGVRALRALGIEPAVWHANEGHAAFMLIERLRELV
                     AAGSSYEDAVRKVRAQSVFTTHTPVPAGHDFFTADQLEACLGPVWEEIGIDRDTLFGL
                     GTHPSLPGQFHMTVVAIRLSSRLNGVSRRHGQVSRNLWRELWPNRPWESVPIGHVTNG
                     VHLATWMANPIMALLDEHLGPEWGNRLEEPGFWDRVLTLDHAKFWEAHRRQKLALASF
                     VREDARRRFAGQLKEAAQVVGAGTLLDPMAFTIGFGRRFATYKRANLIFRDIERLRRL
                     LVDPWRPVQIIFAGKAHPADNPGKEVLQSVYQFTRDPEFEGRVAFLEDYDMHLAHLLV
                     QGVDLWLNLPRVPLEASGTSGMKAALNGVPQLSTLDGWWQEGYDGLSGWAISPAPESS
                     DADAADAEDFYRLLEEQVVPLYYTRNAQGVPLGWVEKMRHALRLAGTRFTARRMLRDY
                     VQEYYAPAIEGDASGDDPPTA"
     gene            1428..2933
                     /locus_tag="VGQ24_10865"
     CDS             1428..2933
                     /locus_tag="VGQ24_10865"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: protein motif:HMM:TIGR02095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004373 - glycogen (starch) synthase
                     activity [Evidence IEA];
                     GO_function: GO:0009011 - starch synthase activity
                     [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase"
                     /protein_id="HEV8455387.1"
                     /translation="MSTLHQPARESASSVPPLRTAGGQPVSVVHVTAEYYPYARIGGL
                     AEAVSGLTRFQKAAGLNVAAILPLYRTVRDVDPDLEPVGQPFAVPMGSHTEEARIFRV
                     AGAHAGPQVFFIEHLGYFNRPGIYGENAIDYPDNARRFAFFALAAVTALPRLVPGPIV
                     LHAHDWHTALSLVYLRTLMGERYSGEVTAVLSVHNPGYQGHFPPDVMPQIGLPWELYN
                     WRQLEWYGKVNFLKGGLAFADFVTTVSPTQAAELRTAGGGFGLHDVFIWLADRLVGVL
                     NGIDQRAWDPAADRQITAQYSAAKLEGKRRCKAALQRSFGLPQRRKVPLFGMTGRMVT
                     QKGLDLILQSDDLLALDAQFVFLGSGEKQYETALVELASSAPDRVGVQLDFTDRLEHR
                     LMAGADLFLMPSLYEPCGLTQMRAQLYGSPPIVRHVGGLADTVEDGVTGFAFKPYTSD
                     AFQEATFRALDCFSQPARWEAVMRQGMARDFSWERSVAMYLDVYRRAIALR"
BASE COUNT          495 a         1014 c          962 g          547 t
ORIGIN      
        1 cttgcaccag gagctcgtgc tcggcgtcgg cggcgtccgc gcgctgcgcg cgctcggcat
       61 cgagccggcg gtgtggcacg ccaacgaggg gcatgccgcg ttcatgttga tcgagcggct
      121 cagggagctg gtcgccgccg gatcgtccta cgaggacgcc gtgcgcaaag tccgggcgca
      181 gagtgtcttc accacccaca ccccagttcc tgccgggcac gacttcttca ccgcggacca
      241 gctcgaggcc tgcctcggac cggtatggga ggagatcggc atcgaccgcg acacgctgtt
      301 cgggctcggt acccaccctt cgttgcccgg ccagttccac atgaccgtcg tggcaattcg
      361 gctctcgtcc aggctgaacg gcgtctcccg gcgtcatggc caggtatccc ggaatctctg
      421 gcgggaactg tggcccaatc gaccgtggga gtccgtgccc atcgggcatg tgacgaacgg
      481 cgtccatctg gctacttgga tggccaaccc gattatggcc ctgctcgacg agcatctcgg
      541 cccggaatgg gggaaccgcc tcgaggagcc gggattctgg gaccgagtgc tcacgctcga
      601 tcatgccaag ttctgggagg cccatcgccg gcagaagctg gcactggcgt ccttcgtgcg
      661 cgaggacgcg cggcgcaggt tcgcgggaca gctcaaggaa gccgcccagg tcgtcggtgc
      721 gggaaccctg ctcgatccaa tggcgttcac catcggattc ggccgccgat ttgccaccta
      781 caagcgagcc aacctgatct tccgcgacat cgagcggctc cgccgcctgc tggtagaccc
      841 ctggcgtccg gttcagatca tctttgccgg gaaggcacat cccgcggaca acccgggcaa
      901 ggaagttctc cagagcgtct accagttcac ccgggatccc gagttcgagg gacgggtcgc
      961 tttcctcgag gattacgaca tgcacctggc ccacctcctg gtccagggcg tggatctctg
     1021 gcttaatctt ccccgggtac cgctggaggc gtcaggaacg agcggcatga aagcggcgct
     1081 caacggtgtt ccccagctca gcacgctcga cgggtggtgg caggagggct acgatgggct
     1141 gagcgggtgg gccatctccc ctgccccgga gagctccgat gccgatgcgg ccgacgcgga
     1201 ggacttttac cgtctgctgg aggagcaggt cgttccgctc tactacaccc gaaacgcgca
     1261 gggcgttcca ctgggttggg tggagaagat gcgccacgcg ttacgactgg cgggtacccg
     1321 atttaccgcg cggcggatgc tgcgcgacta cgtgcaggag tactacgcac cagcaatcga
     1381 gggggacgcc tcgggcgacg atccaccaac tgcctgaagc atacaggatg agcacgctcc
     1441 accaaccggc acgcgagtcg gcgagttcgg taccgccgct caggaccgcc ggaggccaac
     1501 cggtctccgt cgttcacgtg acggcggagt attacccgta tgcccggatc ggaggcctgg
     1561 ccgaagccgt gagcggtctg acccgctttc agaaggctgc cggcttgaac gtggcggcaa
     1621 tcctcccact ctaccgcacg gtacgcgacg tcgaccccga tctcgagccg gtcggtcagc
     1681 ccttcgcagt cccgatggga tcgcataccg aggaggcacg catcttccgg gtggccggag
     1741 cccatgccgg gccccaggtc ttcttcatcg agcatcttgg atacttcaac cgcccgggca
     1801 tctacggcga gaacgccata gactatcccg acaacgctcg ccgctttgcc ttcttcgcgc
     1861 tcgccgccgt caccgcgctg ccgcggttgg tccccgggcc gatcgtgctt cacgcgcacg
     1921 actggcacac tgccctctcg ctggtctatc tccgcacctt gatgggtgag cggtattccg
     1981 gcgaggttac cgcggtgctc tccgtgcaca accccggata ccagggccac ttccccccgg
     2041 atgtcatgcc ccagatcggg cttccctggg agctgtacaa ctggcgccag ctcgagtggt
     2101 acggcaaagt gaatttcctg aagggtggac tggcctttgc cgatttcgtt accaccgtga
     2161 gcccgaccca ggccgccgag ctgcgaacgg ctggtggcgg cttcggactg cacgatgtct
     2221 ttatctggct ggcggaccgt ctagtgggcg ttctcaacgg aatcgaccag cgagcctggg
     2281 atccggcggc cgatcgccag atcacagccc agtactcggc ggcgaagctg gaagggaaac
     2341 gccgttgtaa ggcggccctc cagcggtcct tcggtttgcc gcagcgacgc aaggtccccc
     2401 tgttcggcat gaccggccgc atggtcaccc agaagggtct ggacctgatc ctccagagcg
     2461 atgacctgct cgcgctcgat gcccagttcg tcttcctcgg cagcggagaa aaacagtacg
     2521 agaccgctct ggtggagctg gcctcatccg cacccgaccg ggtcggagtc cagctcgact
     2581 tcaccgaccg cctggagcac cgcttgatgg ctggggccga cctcttcctc atgccgtcgc
     2641 tatacgagcc gtgtggtctc acccagatgc gcgcccagct ctacgggtcg ccgccgattg
     2701 tgcgtcatgt gggtggactc gccgatacgg tcgaggacgg agtgaccggc ttcgccttta
     2761 agccgtacac ctccgacgcc tttcaggagg ccaccttccg ggcgctcgat tgtttctccc
     2821 agccggccag gtgggaggcg gtcatgcgcc aggggatggc ccgggatttc agctgggagc
     2881 gctcggtcgc gatgtacctc gacgtctatc gccgggcaat cgctctccga tgagcccccg
     2941 gtcgatggac ttcgtcttca ccctgcacag ccacctgccg tacgtcctca atcatggccg
     3001 ctggccgcac gggagtga
//
LOCUS       DASYRV010000402         3726 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_162967, whole genome shotgun sequence.
ACCESSION   DASYRV010000402 DASYRV010000000
VERSION     DASYRV010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3726
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162967"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..834
                     /locus_tag="VGQ24_10870"
     CDS             <1..834
                     /locus_tag="VGQ24_10870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455388.1"
                     /translation="LPSQVFGTSGDWAGFEYAQGIRLGTMAGARWVHSLDQLYLDPVK
                     AAANGPGGAFDPALYEVNFDGYLVKKARRGTADERPIQLIACADAKKNPIACAAGQSP
                     TGRFFLGVASPDFRMGFNTVFTFKRFAVSSLLDWSYGGSITNVTAHWATQDCADVRCD
                     QFNKPADQRIAEGFYSTGLYFGAAANEAYVEGATFLKLRELSVNYTLAHNQLQGIGLG
                     RFLNEVRVGLIGRNLFTHTKYSGFDPEVAPAADDPFKGRTEWFQYPPFRTITGFIEIA
                     F"
     gene            864..2711
                     /locus_tag="VGQ24_10875"
     CDS             864..2711
                     /locus_tag="VGQ24_10875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455389.1"
                     /translation="MVTGYRYWRSLAAVALLAGVVSCGSLDIANRNAPERERAFSDPE
                     TVKASAAGSIKSYINTRVWYEPALGPFSTMADEHSFSWNNWQSRYYSSYGAECPLHCG
                     WANETTHPRYEPIPLWWYGLYSVISSANDVLFAIRQSPTPPDLGDDKGWVEAIAQLSQ
                     GVAHGLLALTYDRGFVVTEDADLLALELVSREAVRDAALAQLDEAATLAAAADFSIAP
                     TALFGIPSGPVYTGAQVAQIARTFQAEVLAQYARTSAENAATNWAQVVTYASKGISSG
                     TPFDFKVFASDRQSTEDFFSGIEQWGNDYTTTRIDTRVARLLSTTQADPWPGGAGNPQ
                     PATAAGVPIGGVYGVDKRLGDGCFLAGNTFGDGECAATANSGTDFIWDPSTYFPASRG
                     QFHQSNIGYIRYHCLVGFFPDCATPAGTFVVLSQHLNDLLWAEGLVRTNGDLALAAQL
                     INRSHVTRGNLPACTAAGCTGPGVPAGLTAQQSLLAGIFYEWHVELVSMSPDHWFNGR
                     RLANTNLVSAGPNPWAANQQTYGPEGPYVWNPLWGNTPRSMPIPAKDLALLGLELYSF
                     GGPDDPAGCGTTGPACVMGVDGTAKVKGVRQIYRELMAAQPKPGTRLRQ"
     gene            complement(2773..3141)
                     /locus_tag="VGQ24_10880"
     CDS             complement(2773..3141)
                     /locus_tag="VGQ24_10880"
                     /inference="COORDINATES: protein motif:HMM:NF037015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEV8455390.1"
                     /translation="MRMKLMAGILVVGSSIGCTVNTDLPPDDLDPVVQITAPLDGATV
                     NGGVSVEVNAADNYSVEVVRILIDGTLRGTFYARPYQLVWSTLALQNNTSHTIVAEAS
                     DASGNVGRAQVTVTVFNTPQ"
     gene            complement(3179..>3726)
                     /locus_tag="VGQ24_10885"
     CDS             complement(3179..>3726)
                     /locus_tag="VGQ24_10885"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CRTAC1 family protein"
                     /protein_id="HEV8455391.1"
                     /translation="FNGDGNEDLVLSQNFYPTDLGTPRYDAGRALLLVGDGKGALRPV
                     PGGESGLLVYGDQRGAGAADYDQDGRLDVVITQNGAATRVYRNQGAAPGLQVRLQGPP
                     GNPRGIGATIRLKAGAAWGPAREVQAGSGYWSVSSATQVVAPAGGPATLQVRWPDGRV
                     VEVPVAAGVREATVAYRQELP"
BASE COUNT          634 a         1254 c         1159 g          679 t
ORIGIN      
        1 ctcccgagcc aggtcttcgg aacttcgggt gattgggccg ggttcgagta cgcccaaggg
       61 attcggctcg gcaccatggc cggtgcccgt tgggtccaca gcctcgatca gctctatctc
      121 gacccggtca aggcggcggc caatggaccc ggcggggcct tcgatcccgc cttatacgag
      181 gtgaacttcg acggctacct ggtgaagaag gcccgccgag gcaccgcgga tgagcgtccc
      241 atccagctga tcgcgtgcgc cgatgcaaaa aagaacccga tagcctgcgc tgccgggcaa
      301 agcccaaccg gccggttctt cttgggcgtg gcatcgccgg acttccggat gggcttcaac
      361 accgtcttca ccttcaagcg cttcgcggtc agcagcctgc tcgactggag ctacggcggc
      421 tcgatcacca acgtaaccgc gcactgggct acccaggact gcgccgacgt gcgctgtgac
      481 cagttcaaca agccggccga ccagcgcatt gcggaaggat tctacagcac cggattgtac
      541 ttcggcgccg ccgccaacga ggcctacgtc gaaggtgcca ccttcctcaa gctgcgggag
      601 ctttcggtga attacaccct ggcccacaac cagcttcagg gtattgggct cggccgcttc
      661 ctgaacgagg ttcgggtcgg gctgatcggc cgcaacctgt ttacccacac gaagtacagc
      721 ggcttcgatc cggaagtcgc gccggcggcc gacgatccgt tcaagggccg gaccgaatgg
      781 ttccagtatc cgcctttccg gaccatcacc ggcttcatcg agatcgcttt ctgaccaccg
      841 accgctctca cgaggtgacc tacatggtga ctggataccg ttactggcgc tcgctcgcgg
      901 cggtggctct actggccgga gtggtgagct gcgggagtct cgatatcgcc aaccgcaacg
      961 ccccggagcg ggaacgggct ttctccgatc ccgaaaccgt caaggcttcg gcggctggct
     1021 cgatcaagtc ctacatcaac accagagtat ggtacgagcc ggcgctcggc ccgttctcga
     1081 cgatggccga cgagcattcg ttctcgtgga acaactggca gtcgcgctac tactcgagct
     1141 atggcgccga atgcccgttg cactgcggct gggccaacga gaccacccat ccccggtacg
     1201 agcccattcc gttgtggtgg tacgggttgt actcggtcat ttcctcggcg aacgatgtgc
     1261 tgttcgccat ccggcaatcc cccaccccgc ccgatctggg cgatgataag ggttgggtgg
     1321 aggcaatagc ccaactgtcg caaggggtgg ctcacgggct gctcgcgctg acctacgacc
     1381 gcggcttcgt cgttaccgaa gacgcggatc tactcgccct cgagctggtg agccgcgagg
     1441 ctgtgcggga cgccgcgctc gcccagttgg atgaggcggc caccctggct gccgcggcgg
     1501 acttctcgat cgcgcccacg gcgctgttcg gtattccgag tggtcccgtt tacaccggtg
     1561 cgcaggtcgc ccaaatcgct cggactttcc aggcggaggt gctcgcgcag tacgcgcgga
     1621 ccagtgcgga aaatgccgcg accaactggg cccaggtcgt tacctatgcc tccaagggga
     1681 tcagctccgg cacgcccttc gacttcaagg tcttcgcgtc cgaccgtcaa agcaccgagg
     1741 acttcttcag tggtatcgag cagtggggca atgactatac cacgacccgc atcgataccc
     1801 gcgttgcgcg gctcctctcc accactcagg ccgacccctg gcccggtggg gcggggaacc
     1861 cccagcccgc gacagccgca ggggtgccca ttggaggcgt ctatggggtc gacaagcgcc
     1921 tgggcgatgg ctgcttcctg gcgggcaaca ccttcgggga tggcgagtgc gccgccacgg
     1981 ccaattcggg caccgatttc atttgggatc cctccactta cttccccgct tcgcgcgggc
     2041 agtttcatca gagcaacatc gggtacatcc gctatcactg cctggtgggc tttttccccg
     2101 attgcgcgac accggccggc accttcgtgg tcctgagcca gcatctgaac gacctgctct
     2161 gggccgaggg cctggtgcgc accaacgggg acctggcgct cgcggctcag ctcatcaacc
     2221 gctcgcacgt gactcgtggg aaccttcccg cgtgcacggc tgccggatgt acggggccgg
     2281 gggtcccggc agggctgaca gcccagcaga gtttgcttgc cggcatcttt tacgaatggc
     2341 atgtcgagct ggtcagcatg tctcccgatc actggttcaa cggccgacga ctcgccaata
     2401 cgaacctcgt ctccgccggc ccgaacccct gggccgccaa ccagcagacc tacgggcccg
     2461 aggggcccta cgtgtggaac ccgctttggg gcaacacccc tcggtcgatg ccaattccgg
     2521 ccaaggatct cgccttgctg gggctggagc tctacagctt tggcggtccc gatgatccag
     2581 ccggatgcgg taccaccggc ccggcctgcg tgatgggggt tgacgggaca gcgaaggtga
     2641 agggcgtgcg gcagatttac agggaactga tggccgcgca gcctaagccg ggcacgcggc
     2701 tgcggcagta acgaagcagg gtagttcgcc acgtgaagcg gctggccagc gatggccagc
     2761 cgctttgcat tgctattgcg gcgtgttgaa gaccgtcaca gtcacctgag cccggcctac
     2821 attgccggac gcatcggatg cctccgcgac gatggtatgc gacgtgttgt tctggagggc
     2881 gagggtgctc cacaccagct gatagggtcg ggcataaaaa gtaccgcgga gggttccgtc
     2941 aatcaggatc cgcaccacct ccactgaata gttgtcggcc gcgttgactt ccaccgacac
     3001 ccccccattg accgtcgcac cgtccagcgg tgcggtgatc tgaaccacgg gatccaggtc
     3061 atccgggggc aagtcggtgt tgaccgtgca gccgatggag ctgcctacca ccaggatgcc
     3121 tgccataagc ttcattcgca tacgatctcc gactcggttt tcctgcgccc cccggagttt
     3181 aggggagctc ctggcggtac gccaccgtag cttcccggac accggccgcc accggcactt
     3241 ccaccactcg gccatccggc cagcgcactt ggagcgtggc cggtcctccg gcgggcgcga
     3301 cgacctgagt tgcgctgctc accgaccagt accccgatcc cgcctgaacc tcgcgcgcag
     3361 gtccccaggc cgctccggcc ttgagccgga tggtagcgcc gatcccgcga ggattgccgg
     3421 ggggaccttg tagcctgacc tggagacccg gtgccgcgcc ctgatttcgg tacacgcggg
     3481 tcgccgcgcc gttctgggta atcacgacat cgagccggcc gtcctggtcg taatcggcag
     3541 cccctgcgcc tcgctggtct ccgtaaacga gcaggcctga ctcccctccc ggcaccggcc
     3601 ttaaagctcc cttgccgtcg cccacgagca gcagggcgcg gccggcgtcg tagcggggag
     3661 tgcccagatc ggtgggataa aagttctgac tcaggaccag gtcctcattc ccgtccccat
     3721 taaaat
//
LOCUS       DASYRV010000403         8332 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2787913, whole genome shotgun sequence.
ACCESSION   DASYRV010000403 DASYRV010000000
VERSION     DASYRV010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8332
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2787913"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            323..883
                     /locus_tag="VGQ24_10890"
     CDS             323..883
                     /locus_tag="VGQ24_10890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455392.1"
                     /translation="MRASQPALLAAGRVIAEMRDSVVSQWVDWLGDRTTGAHTIPRAT
                     VEREFRLLFDVMTEMVGPLRREVNAVWFHACEHYGRVASARGLAAGEVVEELTFFREM
                     LIRNLAPVLVAMRARQGMAIMLRLNRVIDKGIAVAVVGYTDALVATLFSQNGVPSFGA
                     DHDPLEVGRQLDALEQELQSVSKQVK"
     gene            899..2074
                     /locus_tag="VGQ24_10895"
     CDS             899..2074
                     /locus_tag="VGQ24_10895"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEV8455393.1"
                     /translation="MRLHYAVDLLPAVPWLIPFLTLPRLSRRSPNLSDAPARSGRLVS
                     VIIPARNEAATIATVVRSILDTSYRPFELLVVDDRSSDRTAAIVESLPVDPRLRLVRG
                     EELPEGWYGKPWACFQGYRHARGELLLFTDADTIHQPALLRHAVGALEQQNAALVTVS
                     PTQRCVTFWERLVMPQIWFLLALRYHPRTVNRARRARDVIANGQFILTSRTAYEIAGT
                     HAAVRQEVAEDLALAQSYLGKGLKLHFAFAERLMETRMYQGLAHLIEGWSKNIYLGGR
                     RSFPDEPLRRALVPVMLVLGMLFWLTPPAGLLAAAVEPALAQVAPAALAATGLSALFW
                     MLICYGMKIPVLYGLGYPMGALMTLYIILKSTWRGGRRVEWRGRVYEDKSGSGQEKA"
     gene            complement(2082..2732)
                     /locus_tag="VGQ24_10900"
     CDS             complement(2082..2732)
                     /locus_tag="VGQ24_10900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455394.1"
                     /translation="MPRLDCLSLLALTLAVPTILSAQTAADSGSFVVRHASDTVAVER
                     FSRTGIKLEGTLSLRNTKKTSERYAAVIGPDATLPLIEVTVREGVDSGPAKGRIVQRA
                     RVIFKEDSAAVDEVGEAGLVTRVFGTQEGAIPYLNLSFALLEQAVRRARVTQGASQLA
                     FFNLGGGQTLRGRVSSLGSDSLKLDIGDVHFHLRVDREGRVLGGRIPSQDVVAERQ"
     gene            2883..5906
                     /locus_tag="VGQ24_10905"
     CDS             2883..5906
                     /locus_tag="VGQ24_10905"
                     /inference="COORDINATES: protein motif:HMM:NF014442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HEV8455395.1"
                     /translation="MDLETCLSSIHTLSDLPRLVSTLGHEPLWEAGPPETWHRSRDGG
                     STIQVVGQTGPLPWFATESCNPERTAASLAGRLSRRGRICLVLAFDPAARRLAIAVAF
                     GRIPHIELDLARPHEEAVVSLGKLAGRPEGGAMAFAVLAAEALSAEPVGRRFFREFRT
                     TMERVAAALPGPMHADDRHGLALLQLTRVLFLYFIQTKGWLGARPRFLAEEVDRCLAR
                     RRQIHRDLLRPLFFGTLNQPAVSRSRAARGFGAIPFLNGGLFEPHRLERRYCADIPNE
                     IWRDAFDRLFERFHFTVCERDRSGVAPDMLGRVFEGVMAPEARHASGTFYTPTSLVQE
                     LLEAALVALIAERTGGGDREAERQIRNRDPKAVSVLSTLTLLDPAVGSGAFLLGALER
                     LASIESDERRRSARKRYVLTHNLFGVDQSSAAVRLTELRLWLAVIADDPAERADAVSP
                     LPNLDCLIRQGDSLFDPLGWAAGVARQRPALSRELASLRQQAVTAAGPDKHSLVRRLR
                     AIEAQALDQSLGLAEERHRSEITECLQQARANDLFGQRRGLDHESRITLLELRSGLRQ
                     VRHARRKLARDGEVPWFHYQSHFADVFAAGGFDIVIGNPPWLRSELLTSALRSRLADR
                     YHWWRSNVRCYGKGPDLAVAFLERGLELAAPRGVVAMLVPAKVTSAGYGAAARHALAS
                     TTRLHAVADLTGSPQAEFEATVYPLAIVAVKAAPVDGQRVRTTLSLENQRHVMQADLL
                     GGGPWILVRDQVRDAVAELEQNQPRLGESAICHLGLKTGANRLFLNPPADLETEVLRW
                     AIRGRDLRAFRWQSRTRLLWTHDDRGNPLRELPPRAAAYLSLHYAELRARKDFNRGVP
                     WAVFRTRPAVAQYRVVWADLARSLFAVALSKPRDREHIPLNSCYVAPMRTGAEAERLA
                     AWLNSTWLRAAARTRAVPAASGFARFNAQVVARLPLPDRVLADVRLSRITREARAGRA
                     VQEELDDIVARHLGLSASAQSALRSVVDGAAQHRR"
     gene            5935..8094
                     /locus_tag="VGQ24_10910"
     CDS             5935..8094
                     /locus_tag="VGQ24_10910"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012493.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEV8455396.1"
                     /translation="MTVLRPGVPASGMAVAGTLARSLAPKEATDAAPPWLLPEQVQSF
                     RRVLAALRRHGGAVLADPVGSGKTYIALAAAATLNRGSTACLVPATLLAQWESLAARL
                     GVRVTLCSHQQVSRGKLPKGTRGLVVIDESHHFRNSGTRRYRYVAPWLVGRTALMVTA
                     TPVVNRATDLGNQLLLAVRDDALLLDGIASLRTLLTKGCTTASLGQLVVEGDAVSDRR
                     PGTISRITRPTSRECAALNRIIEMLGRLRLSRSQPIAALLRGVLLRSAGSSPAALGTT
                     LCRYRRLLLHARDALGSGKALDRAEIRRFTRELGDQLIWWELMPPAAAGSDIELSDLG
                     EIDDLIQSISHAAEAGDDKLTRLCEILSNGVPSLVFTAFRETVRYLRDRVGDCKLAWC
                     TGERAGIGRTALPRPDVLGWFRAGASSSLGPRHLVVTDVAAEGLDLQRAGRVVHYDLP
                     WTPMRLDQREGRSVRYGSRYAQVEVVRFALPPALEHSLGMESMLARKRRLPALVGLGP
                     AGKHVWRWRNDLALRFAGADALAGAALVVSPHEGLLAGFALQSAGDRPACLSTSLLWL
                     ERDGSWTEAPEAVTLWLERAGAAREIVPIEETRLRSWLVLLARPIKDRLTLTGSRRWV
                     APDPAPAVRRMAARLQALTREAARRHQPSRLVLLEHALEFVTRGHTAGEAALIARLAD
                     SSDAELDRVIPRLQQGRAEWGGLEARLTGLVLFGPRS"
BASE COUNT         1377 a         2692 c         2737 g         1526 t
ORIGIN      
        1 ctccgtagcc cccgcggatg caccacacgg catccaggtt ggggtctcgc agagcctgat
       61 tgaggtcgaa caggcgctcg tcatcggtac ccgccaggta gccgtagcgg ttgtaggcat
      121 tctggcctag caccggttcg taacctagcg cacggcagag ggcgtcggcc ctcgttaaat
      181 catctctctc gagaagcggg cccgccggcg cgatcagtgc aattcggctt cccggcacca
      241 gcttgcgagg tcggatgagc ggttttgacc ccatggtatc cccgctgtag attcacgaac
      301 ctttttcagg gagaatcatg tagtgcgtgc ttcgcagccc gcgttgctcg ccgccggccg
      361 cgttatcgcc gagatgcgcg actcggtggt ctcccagtgg gtcgactggt tgggagaccg
      421 gaccaccggc gcccacacga taccgcgtgc taccgtcgaa cgggagttcc ggcttctgtt
      481 cgacgttatg accgagatgg tcggccccct tcggcgtgag gtcaatgccg tctggttcca
      541 cgcctgcgag cattacggac gcgttgcctc ggcccgcggc ctggctgccg gtgaggtcgt
      601 cgaggagctt acgttcttcc gcgagatgct catccgcaac ctcgctccgg tgcttgtcgc
      661 catgcgcgcc cggcagggca tggcgatcat gctccggctg aatcgggtaa tcgacaaggg
      721 catcgcagtc gccgtcgtgg gctacaccga cgcgctcgtt gcgacactct tctcccagaa
      781 cggcgttcct tcgttcggcg cagaccacga tcctttggaa gtcgggcgcc agctcgatgc
      841 gctggaacag gagcttcagt ccgtctccaa acaagtgaag tagcgggggc gcacgtcggt
      901 gcgcctccac tatgcggtcg acttgcttcc ggcagttccc tggctcattc ccttcctgac
      961 gctcccacgg ctgtcccgcc gtagtcccaa cctctccgat gcaccagcaa gatccggacg
     1021 gctcgtgtcg gtcattattc cggcccgcaa cgaggcagcc acaattgcca cagttgtgcg
     1081 ctcgatcctg gatacgagtt accgcccctt cgagctgttg gtcgtggacg accgctccag
     1141 cgatagaacc gccgccatcg tcgagagcct cccggtcgac ccccgactcc gactggtccg
     1201 gggcgaggag ctgcccgagg gctggtacgg aaagccgtgg gcctgcttcc agggttaccg
     1261 tcacgctcga ggtgagctgc tgctgttcac cgacgccgat accatacatc aaccggcgct
     1321 cctgaggcac gcggtcggcg cgctggagca acagaatgcg gcactcgtga cggtgtcgcc
     1381 cactcaacga tgcgtgacat tctgggagcg gctggtgatg ccgcagatct ggttcctcct
     1441 ggcgctgcgc taccacccgc ggacagtaaa ccgggcacgt cgagccaggg atgtcatcgc
     1501 caacgggcag ttcatcctga ccagccgcac ggcctacgaa atcgccggta ctcatgccgc
     1561 ggtgcgtcag gaggtggccg aggatctggc actcgcgcaa agctatctcg ggaagggcct
     1621 gaagctgcat ttcgcattcg cggagcggct gatggaaacc cggatgtatc agggcctggc
     1681 tcacctgatc gagggctggt ccaagaacat ctacctgggc ggacggcgtt cgttccccga
     1741 tgagccgctt agacgcgcgc tggtgccggt gatgctggtc ctgggcatgc tgttctggtt
     1801 gaccccgcct gctgggctgt tggcggctgc cgttgaaccg gcgctcgcgc aagtcgcgcc
     1861 agccgcgctc gccgcgaccg gtctctcggc cctgttctgg atgctgatct gttatgggat
     1921 gaagattccg gtgctctacg ggttgggata tccgatgggc gcactcatga ccctgtacat
     1981 aatcctgaaa tcgacctggc gaggcggacg acgggtggag tggagaggcc gggtatatga
     2041 agacaagagc gggagcgggc aagaaaaagc gtgagcgttt tttactgtct ttcggccacc
     2101 acatcctgcg acggtatccg cccccccagc actctgccct cccgatcgac cctgagatgg
     2161 aagtggacat ctccaatgtc gagcttcaat gagtcgctgc cgagcgatga cacgcgaccc
     2221 ctgagcgtct gcccgccgcc gagattgaag aaggccagct gagaggctcc ctgagtcact
     2281 cgtgcccggc gcaccgcctg ctccagcaag gcgaacgaga gattgaggta gggtatggcc
     2341 ccctcctggg tcccgaaaac acgggtcacc agccccgcct caccgacctc gtccacggcc
     2401 gcactgtctt ccttgaagat cacccgggcc cgctggacga tccttccctt ggcagggccg
     2461 ctgtcgacgc cctcccggac agtcacctcg atcagtggca aggtggcatc gggcccgatc
     2521 acggcggcgt agcgctccga cgtcttcttc gtgtttcgca gggagagggt gccctcgagc
     2581 ttgatcccgg tacgggagaa tcgctcgacg gcaacggtgt cgctggcatg acgcaccacg
     2641 aagctgccgc tatcggccgc tgtctgggct gagaggatgg tgggtacagc cagggtgagc
     2701 gcaagaagag aaagacagtc gagtcggggc atcggtgttt gggttggaat tgagtctcaa
     2761 ggtagagacg tcaaggtact aaagtcctct cgtattccgc tacgtccggc ggcattccga
     2821 tgcagtgagc ttgtccgcga ctccatacca tgggcctccg ccttgcccgg agcgctccac
     2881 ggatggatct cgagacctgc ctctcgtcga ttcacactct ctccgatctg ccacgcctgg
     2941 tgtctacgct cggtcacgag ccgctctggg aggcaggtcc gcccgagaca tggcaccgaa
     3001 gcagggatgg cggttccacg attcaggttg tcggccaaac cgggcccctg ccctggttcg
     3061 ccaccgagag ctgcaaccct gaacgcaccg ccgccagcct ggccggccgg ctgagccggc
     3121 gaggaagaat atgtctagtt ctcgcatttg atcctgccgc acgccggttg gcgatcgcgg
     3181 tcgctttcgg ccgaatcccc cacatcgagc tggacctcgc ccgcccccac gaggaagcgg
     3241 tcgtgtcgct ggggaagctg gctggaaggc cggagggcgg cgcaatggcc tttgccgttc
     3301 tcgctgccga agcactgtcg gccgagccag taggccgccg gttcttccgg gagtttcgca
     3361 ccacgatgga gcgggtagcc gccgcgctcc ccggccccat gcacgcagac gatcgacacg
     3421 gactagccct tcttcagctc acccgggtgc tctttctcta cttcatccag accaaaggct
     3481 ggctcggcgc gcgtccgcgg tttctggccg aagaagtgga tcggtgtctg gcccgacggc
     3541 ggcagatcca tcgcgatctc ctgcgtccac tcttcttcgg aacgctgaat cagccggcag
     3601 tgtcacggag ccgtgcggcg cgggggttcg gagccatccc gtttctgaat ggcgggctct
     3661 tcgagccgca ccggctggag cgacggtatt gtgccgatat ccccaacgag atctggcgcg
     3721 acgcattcga ccggctgttc gagcggtttc actttaccgt gtgcgagcga gaccgcagcg
     3781 gtgtcgcgcc ggacatgctg ggccgggtgt tcgagggcgt gatggccccc gaggcgcgac
     3841 acgcctcagg caccttctat acccccacat cactggtaca agagctgctc gaggcggcgc
     3901 tcgtggcgct cattgccgaa cggaccggtg ggggagaccg ggaagccgaa cggcagatac
     3961 ggaaccgcga tcccaaagct gtgagtgtcc tcagcacgct gactttgctc gaccccgctg
     4021 tgggatccgg ggcctttctg ctcggtgcac tcgagcgact cgcgtcgatc gaatcagatg
     4081 agcgccggcg atcagccagg aagcgttacg tcctgacgca taatctgttc ggggtagacc
     4141 agagctcagc tgctgtacgc cttaccgagc tccgtctctg gctagctgtg atcgccgacg
     4201 atccggccga gagggcagac gcggtgagcc cgcttcccaa cctcgactgc ctcattcgcc
     4261 aaggcgacag tctcttcgat ccgctgggat gggctgcggg agtggcacgg caacggccgg
     4321 cactgagccg cgagctcgcc agtctgcggc agcaggcggt caccgcggcg ggcccggaca
     4381 agcactcgct ggtgcggcga ctccgggcca tcgaggcgca ggcgctggac caatcccttg
     4441 gcctggcgga ggagcgacat cggtcggaga tcacggagtg cctgcaacag gcacgagcca
     4501 atgatctctt cggtcagcgg cgaggtctgg atcacgaatc ccgcatcact ctcctggagc
     4561 tgcgtagcgg gcttcgccaa gtacggcatg cccggcgcaa gctcgctcgt gatggtgagg
     4621 tcccctggtt tcactaccag agtcacttcg cggatgtgtt cgccgccggc ggtttcgaca
     4681 ttgtgatcgg caatccgccc tggttgagat cggagctact gacatccgca ctcaggagcc
     4741 ggctagcgga caggtaccac tggtggcgat ccaatgtccg gtgctacggc aagggtccag
     4801 acctggccgt cgcctttctc gagcggggcc tcgagctggc cgctccgagg ggtgtggtcg
     4861 ccatgctggt cccggccaag gtcacgagtg cgggatatgg tgccgcggca cgccatgcgc
     4921 tcgccagcac tacaaggctc cacgcagttg cggacctcac cggatctccg caggccgagt
     4981 tcgaggcaac ggtgtacccg ctggccatcg ttgcggtcaa ggcggcgccg gtggatgggc
     5041 agcgggtgcg caccacgctt tcgctcgaga accaacggca cgtcatgcag gcagacctcc
     5101 tgggtggcgg gccctggatc ctggtacgcg accaggtgag ggatgctgtt gccgagctgg
     5161 agcagaacca gcccagactc ggcgagagcg ccatctgcca cctgggcctc aagaccggag
     5221 ccaatcggct ctttctgaat ccgccagccg atctcgagac tgaggtgctc cgctgggcaa
     5281 tacgggggcg cgacctcagg gctttccgtt ggcagagcag gacgcggctg ctctggaccc
     5341 acgatgatcg gggaaaccct ctccgcgagc ttcctccgag ggccgcggcc tatctcagtc
     5401 tccattacgc cgagcttcga gcccgcaagg atttcaatcg cggggtaccc tgggcggtgt
     5461 ttcgcacccg gcccgccgtg gctcaatacc gcgtagtctg ggccgacctg gcgcggagtt
     5521 tgttcgcggt agccctgagc aagccgcgcg atcgtgaaca catccccctc aacagctgct
     5581 atgtggcgcc gatgcgcaca ggcgcagaag ccgagcgact cgccgcgtgg ctcaactcga
     5641 cctggctcag ggccgccgcc cgtaccaggg cagtaccggc agccagcggg ttcgctcgct
     5701 tcaacgcaca ggtagtagcc cgtctgccgc taccggatag ggtgctggcc gacgtacgac
     5761 tcagccggat cacccgtgaa gctcgtgccg gccgagcggt gcaggaggag ctggatgaca
     5821 tcgtggcacg acatcttgga ctctcggctt ccgcccagag tgcactccgc agtgtggtgg
     5881 acggcgccgc ccagcatcgt cgctgagtca ctggaggcag tacccgatcc actgatgacg
     5941 gtgctccgcc cgggcgtgcc ggcctccgga atggctgtgg caggcacttt ggctcgaagc
     6001 ctggcgccga aagaagcgac cgatgcggca ccgccatggc tgctgccgga acaggtccag
     6061 agttttcgcc gagtgctcgc tgcgctgcgg cgtcacgggg gtgcggtgct ggcggacccg
     6121 gtcggaagcg gcaagaccta catcgcactg gccgccgccg ccaccctcaa tcgtggatcg
     6181 acggcatgcc tggtgccggc gacactgctg gcacaatggg aatcgctcgc ggctcggctc
     6241 ggagtccggg tgacgttgtg ctctcaccag caggtgagcc ggggaaaact accgaagggc
     6301 acccgagggc tggtcgtcat cgacgagagt caccacttca gaaactcggg gacccggcgc
     6361 taccggtatg tggcaccatg gctggtcggg cggactgcac tgatggtcac cgccacgccg
     6421 gtggtgaacc gcgcaaccga tctgggcaac caactgctcc tggccgtgcg cgatgacgct
     6481 ttgctgctgg atggcatcgc ctcgcttcgg acacttctca cgaaggggtg caccacggcc
     6541 tcgctgggac agcttgtggt cgaaggcgat gcggtcagcg atcgacggcc cggcaccatc
     6601 agcaggatca cccgccccac cagccgagaa tgcgccgcat tgaatcggat catagagatg
     6661 ctgggccggc ttcggctctc gcgttcgcag ccgatcgccg cgttgctgcg tggagtcctg
     6721 ctgcgatccg ccggctccag ccccgcggcc ctgggcacca ccctctgccg ctaccgtagg
     6781 ctgctgctgc atgctcgaga cgctttgggc tcaggcaagg ccctggatcg cgccgagatc
     6841 cggcgtttca cgcgggagct gggcgatcaa ctcatctggt gggagttgat gccgccggcc
     6901 gcggcgggga gcgacatcga gctgagcgat ctcggggaga tcgacgatct gatccagtcg
     6961 ataagccacg cggctgaagc tggcgatgac aaactgaccc gtctttgcga gatcctgagc
     7021 aacggagttc ccagcctggt ctttaccgca tttagagaaa cggtgcgcta tctccgtgac
     7081 cgcgtcggcg attgcaaatt ggcgtggtgt accggggagc gcgccggcat cggacgcaca
     7141 gcactgcccc ggccggatgt attgggctgg ttccgggcgg gagcatcgtc cagccttggg
     7201 ccacgacatc tcgttgtcac cgacgtggct gcggagggcc tcgacctgca gcgtgccggg
     7261 cgggtggtgc attacgacct gccctggacc cccatgcggc tggaccaacg cgaaggccgc
     7321 tcggtgcgat acggctctcg ctacgcacag gtggaagtgg ttcggtttgc gttgccaccc
     7381 gccctggagc actcgcttgg gatggaaagt atgctggcgc gaaagcgccg gctcccagcg
     7441 ctggtaggcc taggcccggc gggaaagcac gtctggcgct ggcggaacga cctcgcactg
     7501 cgttttgccg gcgctgatgc tctcgccggt gccgctctcg tcgtgagtcc gcacgagggg
     7561 ctgctggcag ggtttgcgct tcagagcgca ggagatcgcc ccgcctgtct ctccacatcc
     7621 ctgctctggc tggagcgaga cggatcctgg accgaggcac ccgaagccgt gaccctttgg
     7681 ctcgagcggg cgggagccgc gcgtgagatt gtccccattg aggagactcg cctgcggagc
     7741 tggctcgtac tgctcgctcg cccgatcaag gatcgtctaa ctctgactgg gagccggcgc
     7801 tgggtcgcgc ccgaccccgc acccgccgtc cggcggatgg cagcccgcct gcaggcgctc
     7861 actcgggagg ccgcacggag gcaccagccg agccgtttgg tcctgttgga gcacgcgttg
     7921 gaattcgtga cccgggggca caccgcaggc gaggccgcgc tcatagcgcg gctggcagac
     7981 tcatccgacg cggagctcga tcgggtgatt ccaaggcttc agcaaggtcg agccgaatgg
     8041 ggcggcctcg aggcaaggct caccggacta gttctgtttg gtccccgttc ctgagctgtg
     8101 accgagcgtt ccggaatgag caccggtacg ctctttgctg atggggcccg cgctcatccc
     8161 ctcagtgtcc ccatcaggag ttcattcatg caaaccgcct ttcggtgggt ttttgctgcg
     8221 gtcttcagcc tggctggaat ctcatcgctc gctgcgcagg agagtgatgc agatcgtaag
     8281 gccgagcggc ggcggctgtt tgggaccatt tcgtgggatg agggcccggt ca
//
LOCUS       DASYRV010000404         3310 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1124199, whole genome shotgun sequence.
ACCESSION   DASYRV010000404 DASYRV010000000
VERSION     DASYRV010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3310
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1124199"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1692
                     /locus_tag="VGQ24_10915"
     CDS             <1..1692
                     /locus_tag="VGQ24_10915"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HEV8455397.1"
                     /translation="RLPRLIGVRAALDMILAGKTERAAKALRIGLLDELVPPSILRST
                     AFAAADRIVRHGPPDRPRRGSLWLDRNPLGRRIVYAQARKQVLQKTAGNYPAPLAALE
                     AVRAGMEHGMEAGLRREARLFGQLAVGDVSHNLVRIFFATNALKKDDGVPAGQATAHA
                     VERLGIVGSGFMGSGIAGTAVVQAGVEARLKDAELSRVGKGLKTATDILRGQLSRRRI
                     SRQEYERKAALLSGSDDWRGFERADLVIEAVFEDLAVKRQVMAEVEAVIRPEAVLASN
                     TSTIPIGRIAEGARHAERVLGMHFFSPVDRMPLLEVIPSAQTGPDAIVTAVRFGRRMG
                     KTAIVVADRPGFWVNRILSPYLNEAGLLLQEGAPIELIDRAMTRFGFPVGPIALLDEV
                     GLDVALKASGVMHAAFGDRMQPAPGVAAMVKDGRLGRKAGRGFYLYHAGHKTEPDPAV
                     YRLLGVRPLATVDPAEATRRLVFALLNEAALALAEGVVRSARDGDLGAVYGIGYPPFR
                     GGPLSYIDSLGAAEVVKTLEALALAYGARFTPAPSLVEMAQAATRFYPLSVSGTR"
     gene            1844..3094
                     /locus_tag="VGQ24_10920"
     CDS             1844..3094
                     /locus_tag="VGQ24_10920"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEV8455398.1"
                     /translation="MDIKREPQKNYKKWVIIGGSVAGLVGITVALMSLKPAAPTVDGG
                     TIYTDTVEKGEMVLEVRGPGTLVPEDTRFITAVTTGRVEKIHLLPGTTPVEPETIILE
                     LSNPDVEIQTLNADRQLTDAQSQLVQLRTNLNTNRLTQASAVADLKSQYLDAKRRAEA
                     GAELLKQGLIIPLDQKQAQDRADALEQRVKIEEERLKLLTQTIDEQIKVQEEQVGRLR
                     SIMQFQHGLKASMVVRAGIHGVLREVPLQSGQYATAGTTLARVDPVPLRLKAVLRVPE
                     NQAKDITIGQKAIIDTRNGFAPGHVSRIDPASSAGTVTVDVALEGTPPAGARSDLSVD
                     GVIEIARLKNVLFTGRPAYGQPDATIGIFKLVEGGRYAQRVTVRLGRTSVTSVEIKDG
                     LVPGDIVILSDMSRWDNVERVRIK"
BASE COUNT          595 a         1058 c         1096 g          561 t
ORIGIN      
        1 aggctgcccc gactgatcgg cgtcagggcc gcgctcgata tgattctggc gggaaagacc
       61 gagcgggccg ccaaggccct cagaatcggc ctgctggacg agctggtgcc acccagcatc
      121 ttgcgcagca cggcgttcgc cgcggccgat cgcatcgtgc ggcacggacc gcccgaccgc
      181 ccgcgcaggg gcagtctctg gctggatcgc aatccgctcg gccgccggat cgtctacgcc
      241 caggcgcgca agcaggtgct ccagaagacc gctgggaact atcccgcgcc gctggccgcc
      301 ctggaggcgg tgcgggctgg catggagcac gggatggaag cgggtctgcg gcgcgaagcg
      361 cgcctcttcg gccagctcgc cgtgggtgac gtctcccaca acctggtgcg catttttttc
      421 gccacgaacg cactcaagaa ggacgacgga gtgcctgccg gccaggccac ggcgcatgcc
      481 gtagagcggc tcggcattgt cggctcggga ttcatgggat cgggcatcgc cggcaccgcc
      541 gtggtacagg ccggagtgga agcgcggctc aaagacgcgg agctctcccg cgtcggcaag
      601 ggactcaaga ccgccaccga tattctccgc ggccagcttt cgcggcgccg catctcgcgc
      661 caggagtacg agcggaaggc cgccctgctc agcggttccg acgattggcg tggcttcgag
      721 cgggcagatc tcgtgatcga ggccgtgttt gaggacctgg cggtgaagcg ccaggtcatg
      781 gccgaagtgg aggcggtcat ccggcccgag gcggtattgg ccagcaatac gtccacgatt
      841 ccgatcggcc gcatcgccga aggcgctcgc cacgccgagc gcgtgctggg tatgcacttc
      901 ttttctccgg tcgatcgcat gccgttgctc gaggtgatcc catcggctca gactggtccg
      961 gacgcgatcg tcaccgccgt tcggttcggc cggcgcatgg gcaaaacggc gatcgtggtg
     1021 gctgaccggc cgggattctg ggtcaaccgg attctttcac cctacctgaa cgaggccgga
     1081 ctgctgctgc aggagggggc gccgatcgag ctgatcgatc gggccatgac ccggtttgga
     1141 tttccggtcg gaccgatcgc cctgctggac gaagtggggc tcgacgttgc cctcaaggcg
     1201 agcggggtga tgcacgcggc attcggagac cgaatgcagc ccgctcctgg tgtggcggcc
     1261 atggtcaagg acggtcggct gggacgcaag gcgggtaggg ggttctatct ctatcacgcc
     1321 gggcacaaga ccgagcctga tccggccgtc tatcggctgc tgggcgtccg tccgctggcg
     1381 accgtggacc cggcggaagc cacccggcgg ctggtctttg ctctgctcaa cgaggcggcg
     1441 ctcgcgctcg ccgagggagt ggtgcgctca gcccgggacg gcgacttggg cgccgtctac
     1501 ggcatcggct atcccccgtt tcgcggcggg cccctcagct acatcgactc gctcggtgcc
     1561 gctgaggtgg tcaaaaccct ggaggcgctt gccttggcct acggggcgcg cttcacaccc
     1621 gcgccttccc tggtggaaat ggcccaggcg gctacccgat tctatccctt gtccgtttct
     1681 gggacgcggt aatcccatcg ccgaacagag ccccgcatta ccactccagt agcgatcatg
     1741 tatcttattg taatctagca acttacagag atggaccagt gcggcacggc tcttcctcta
     1801 tagccgtggt tgaggcaacg gattcccctc gacctattga gtcatggaca tcaagcgcga
     1861 gccgcaaaaa aactacaaga agtgggtgat aatcggcggc tccgtcgctg gcctggttgg
     1921 tatcaccgtg gctttgatga gcctgaagcc cgcagcgccg acggttgacg gcggcaccat
     1981 ctacaccgat acggtggaga agggcgagat ggtgctggag gtgcgtgggc ccggcacgct
     2041 ggtgccggag gacactcgtt tcatcaccgc ggtcacgacc ggacgggtcg aaaagatcca
     2101 cctgctcccg ggcaccacgc cggtcgagcc ggaaaccatc atcctcgagc tgagcaatcc
     2161 cgacgtcgag atccagaccc tcaacgccga ccgtcagctc accgacgccc aatcacagtt
     2221 ggtgcaattg cgcaccaatt tgaacacgaa tcgcctgacc caggcctctg cggtcgcgga
     2281 tctcaagtcc cagtatctgg atgcgaaacg ccgggccgaa gccggagcgg agctgctcaa
     2341 gcagggattg atcattccgc tggaccagaa gcaggcgcag gaccgggccg acgcgctcga
     2401 gcagcgtgtc aagatcgagg aggagcgcct caagcttctc acccagacca tcgatgaaca
     2461 aatcaaggtg caggaggagc aggtcggccg gctgcggtcg atcatgcagt tccagcacgg
     2521 gctcaaggcg tcgatggtgg tgcgggccgg catccacggt gtgttgcggg aggtgccgct
     2581 gcagagcggc cagtacgcta cggccgggac cacgctcgcc cgggtcgatc cggttccgct
     2641 gcggctcaag gcggtgctgc gggttcccga gaaccaggcc aaggacatca ccatcggcca
     2701 gaaggcgatc atcgacaccc gcaacggctt tgcgcccggt cacgtgagcc ggatcgatcc
     2761 cgcatcctcg gcgggcaccg tcacggtgga tgtcgcgctg gaggggactc ctcccgccgg
     2821 cgctcgcagc gatttgagcg ttgacggcgt catagagata gcccgactca agaacgtgct
     2881 gtttaccggt cggcccgcct acgggcagcc ggatgcgacg atcggaatct tcaagctggt
     2941 ggagggcggc cgctatgccc agcgagtcac ggtgcggctg ggccggacct cggtgaccag
     3001 cgtggaaatc aaggacggcc tggtccccgg cgacatcgtg atcctctcgg acatgtcgcg
     3061 ctgggacaat gtggaacgag tgcgtatcaa ataggagggg tcttctgacc cctagtccct
     3121 gatctcggct ctctcacgaa caaggaaatc caacatgagc accgcacctg gcgaaaccct
     3181 catcaagctc gacggcatca agaagatctt ctataccgac gagctggaga cccacgctct
     3241 cgacgagatc catctcacga tcgacaaggg cgagtacgtc tcgatctccg gcccctccgg
     3301 ctgcggcaag
//
LOCUS       DASYRV010000405         5330 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2240384, whole genome shotgun sequence.
ACCESSION   DASYRV010000405 DASYRV010000000
VERSION     DASYRV010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5330
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2240384"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..326)
                     /locus_tag="VGQ24_10925"
     CDS             complement(<1..326)
                     /locus_tag="VGQ24_10925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455399.1"
                     /translation="MRGWSVRLRAVCLLSVATAAGCGGERRSGAASAGDAAAVSGSDT
                     AATRAPQTSAAPAPDTMARHDTAAAPSPAPQVARPTPAKKPAPKPAAPKPAAPAQPEP
                     AETTAAA"
     gene            470..1360
                     /locus_tag="VGQ24_10930"
     CDS             470..1360
                     /locus_tag="VGQ24_10930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase"
                     /protein_id="HEV8455400.1"
                     /translation="MTSPTDTRTVTLGLVQMRCTSDPEQNMNKAVDGIRQAAVGGAQI
                     VCLQELFRSQYFCQIEDHRCFGMAEPVPGPSTEAFSKLAAELGVVIIASLFEKRAEGL
                     YHNTAAILDADGRYLGKYRKMHIPDDPQYYEKFYFTPGDLGFRSWDTRFGRIGVLVCW
                     DQWYPEAARLTAMSGAQILFYPTAIGWLPGEKDQHGAQQQAAWETIQRSHAIANGVYV
                     CAVNRVGQEGDPTGGLEFWGGSFVSDPGGRLLVKGGTGEEVLIAECDLTKVDASRTHW
                     PFLRDRRIDAYGDLTKRYLD"
     gene            1475..2512
                     /locus_tag="VGQ24_10935"
     CDS             1475..2512
                     /locus_tag="VGQ24_10935"
                     /inference="COORDINATES: protein motif:HMM:NF016274.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HEV8455401.1"
                     /translation="MPAEWEPHRGTWLSWPHKEPSWPGKFGPIPGIFATMVRHLADRE
                     EVHINVAGPAMDQDVRRLLADAGADSGNVFFHHHPTNDAWVRDHGPIFIQRQEDAAAV
                     EAIVDWKFNAWGDKYPPYDLDDVIPTRIGDELGLPVFHPGIVMEGGSIDVNGLGTLLT
                     TEACLLNPNRNPQLDRAEIEQRLRAYLGVSHILWLGEGIVGDDTDGHVDDLSRFVDPW
                     TVVTAIEEDPADENYEPLQRNLERLNRMTDQDGRPLRIVTLPMPRPMWHNGQRLPASY
                     ANFYIANDLVLLPAYDPPRDEEARATFQSLFPTREVVAIDCTDLVWGLGAFHCVTQQW
                     PALSPESGAGS"
     gene            complement(2558..2944)
                     /locus_tag="VGQ24_10940"
     CDS             complement(2558..2944)
                     /locus_tag="VGQ24_10940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455402.1"
                     /translation="MIGMRCVGLLLVLFSLALGCGGDARKYAGTWKRDLYGEGEVHMK
                     LASNGGVELMLPSPRWPDSVDMKGRAQVKGDTLVFKADTAASACQTAEARYVVSRTED
                     QLHIAGLGADNCGGRRAALVGTWQKS"
     gene            complement(3040..4395)
                     /locus_tag="VGQ24_10945"
     CDS             complement(3040..4395)
                     /locus_tag="VGQ24_10945"
                     /inference="COORDINATES: protein motif:HMM:NF019592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HEV8455403.1"
                     /translation="MMPIKPTRAALLLAFVSVGACNYDIANPNSPSVIGENPSAAQVG
                     AAANGILIATRQDVADWALDGAIFGREAYRIDPADPRFVQELMQGPLDPGSRAFGGDH
                     WLEEYSAIRSANDLLAVIGTASTLTPEEQSAVSGFAHTLQAYNFMIILDCHNQDQIPI
                     DVGRDAGAPPAPFVSNAEAWAHVITLLDQGATELQGLAFPFTLPPGFAGFDSTATFLK
                     FNRALRARVAVYRGDFTGALTYLSQSFVNSAAPLALGVYMDFGTGPGDVANPLAVSDQ
                     TSENFGHPTLETQAQLQVGGARDNRYLTKLVKRPPRSGGTTNTDPVQLLTSDLGWIRY
                     PSPSTPIPLIKNEELILLRAEASIGVGDFVTAVTDINTVRQTSGGLPPYAGAVDQPSL
                     LAELLYNKRYSLMYEGAHSWIDYRRYGLQTLLQSIDRPGPPPDVIFATLPIPLSETQP
                     R"
     gene            complement(4398..>5330)
                     /locus_tag="VGQ24_10950"
     CDS             complement(4398..>5330)
                     /locus_tag="VGQ24_10950"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEV8455404.1"
                     /translation="GTYINNRAGDPQIQPERQEEFEGGIDATLANGRAELNLTLYQRN
                     IRDLILEQTVAPSVGQELRVFGNGGSLRNRGVEASLTLQPVQSRDLNWVFRTTFFANR
                     AKITSLNVPPFQTGGFALFLGTYQIEQDSSPTQIFGTVGNDAAGNGIPGKVGDANPDF
                     QMTFSNDIDFRRFTLGFLFDWKHGGDIINLTEFLYDNGAVSKDYTADGAARFNLLGQG
                     FTYPYVQDGSYLKLREVNLSYNLPDRLASSLFGRGIRYARLSLTGRNLLRFTPYRGLD
                     PEVSNFANQAIVRNIDVAPFPPSRSFFFSIDLGF"
BASE COUNT          934 a         1740 c         1703 g          953 t
ORIGIN      
        1 gctgccgccg tggtctcagc tggttccggc tgggccgggg cggccggttt gggggccgcg
       61 ggcttcggtg ctggcttctt cgccggtgtt gggcgcgcga cctgcggtgc cggactcggc
      121 gccgcggcag tgtcgtgccg agccattgtg tccggcgccg gcgcggcgct cgtctggggc
      181 gcgcgcgtgg ccgcggtgtc cgatccggag accgccgcgg cgtcgccagc cgatgccgca
      241 cccgatcgcc gctcaccgcc acatccagcc gccgttgcaa ccgagagcag gcagaccgca
      301 cgaagacgga cgctccagcc tctcataatc aactcacctc ttcggttggg ggccccaggg
      361 cccgaacaca cagtcaccaa gattgtgtct ctcgcgcgaa cgctaggtga cgcaggtcac
      421 ccactccggt gctgatgact ctcaccgcac gccgaattat tatcccggca tgacctcgcc
      481 caccgatacg cgaaccgtga ctctcggcct ggtgcagatg cgctgcacct cggacccgga
      541 gcagaacatg aacaaggcgg tggacggcat ccgccaggcc gccgtcggtg gggcgcagat
      601 tgtctgcctc caggagctct tccgcagtca atacttctgt cagattgaag accatcgctg
      661 cttcgggatg gcggagccgg tccccggccc ctccaccgag gctttcagca agctggccgc
      721 ggagctcggc gtcgtcatca tcgcgtcgct gttcgagaag cgggccgaag gcctctacca
      781 caataccgcg gccatcctcg atgctgacgg ccggtacctg ggcaagtacc ggaagatgca
      841 catcccggac gacccgcaat actacgagaa gttttacttc actccgggtg acttgggctt
      901 tcgctcgtgg gacacccgct tcggtcgcat cggtgtgctg gtctgctggg atcagtggta
      961 tcccgaggcc gctcgcctca ccgccatgag cggtgcccag atcctctttt atcccaccgc
     1021 gatcggctgg ctgccaggcg agaaggacca gcacggcgct cagcaacagg ccgcctggga
     1081 gacgatccag cggagccacg cgatcgccaa tggcgtgtat gtctgcgccg tgaaccgggt
     1141 cggtcaggag ggcgatccga ccggcggcct cgagttctgg ggcggcagct tcgtgtccga
     1201 cccgggcgga cgcctcctgg tcaagggcgg caccggtgag gaagtcctga tcgccgagtg
     1261 cgacctgacc aaggtggacg cgagccgcac ccactggccc ttcctgcgag accggcgcat
     1321 cgacgcctac ggcgacctca ccaagcggta cctggactag acagcgtgaa tggtgaacgg
     1381 tgaacaggaa gagccggggc cggcgcccgt tcactgctca ctgttcactg tttacgcttt
     1441 ttgtgtgact acaccttcgg agctgggtta tcgcatgccc gccgagtggg agccccaccg
     1501 cgggacctgg ctcagctggc ctcacaagga gccgtcctgg ccgggcaagt ttggtccgat
     1561 tccagggatc tttgccacca tggtgcgtca cctcgcggat cgcgaggagg tgcacatcaa
     1621 cgtggcaggg ccggccatgg accaagacgt tcgccggctc ctggccgacg ccggcgccga
     1681 cagcggcaat gtcttctttc accatcatcc caccaacgat gcctgggtcc gtgaccacgg
     1741 ccccatcttc atccagcggc aggaagacgc cgccgccgtc gaggccatag tggactggaa
     1801 gttcaacgcg tggggggaca aatacccgcc ctacgatctc gatgacgtca tcccgacgcg
     1861 tatcggggac gagttgggtc tgcctgtgtt tcatcccggt atcgtcatgg aaggcggctc
     1921 gatcgacgtg aacggtctcg gcaccctgct gacgaccgag gcctgtctgc tcaaccccaa
     1981 tcgaaatccg cagctggacc gcgcagagat cgagcagcgc ctgcgggcgt accttggcgt
     2041 gtcgcacatc ctctggctgg gcgaggggat cgtcggggac gataccgatg gccatgtgga
     2101 cgacttgtcc cggttcgtcg atccctggac tgtcgtgacg gcgatcgagg aggatccagc
     2161 cgatgaaaac tacgagccgc ttcagcgcaa cctggagcgg ctcaatcgca tgaccgatca
     2221 ggatggccgg cctcttcgaa tcgtcaccct gcccatgccc cggccgatgt ggcacaacgg
     2281 ccagcgccta ccggcgagtt atgccaactt ctacatcgcg aatgatctgg tcctgctccc
     2341 agcttatgat cccccgcgcg acgaggaggc ccgggccacc tttcagtcgc tgttcccgac
     2401 ccgggaggtg gtcgccatcg actgcaccga cctggtctgg ggcctcggcg cgtttcactg
     2461 cgtcacgcag cagtggccgg cgctgagtcc ggagtcagga gccgggagct aggagctcgg
     2521 cttcgacctt cagctccccg ctcccagctc ctagctccta gctcttctgc caagtcccca
     2581 ccagcgccgc ccggcggccg ccgcagttgt ccgccccgag ccccgcgatg tgcagctggt
     2641 cctcggtgcg actgaccaca tagcgggcct cggcagtctg gcaggcgctc gccgcggtgt
     2701 ccgccttgaa caccagggtg tcgcctttca cctgggctcg ccccttcatg tccactgagt
     2761 ccggccagcg tggcgacggc agcatcagct ccactccgcc gttcgaggcc agcttcatat
     2821 ggacctcgcc ctcgccatac aggtcccgtt tccaggtccc ggcatacttc ctggcgtcgc
     2881 ccccgcagcc taaagccagc gagaaaagca ccagcaggag tccgacacat ctcataccga
     2941 tcatcttcgt gtcctccacg ggtgagacaa cggatcagca cagccgggca tcacggagcc
     3001 cggctgcgct ccaccagaat gtatgcagcc ttagctctcc tagcgtggct gcgtctcaga
     3061 cagcgggatc ggcaaggtcg caaagatgac atccggcggt ggccccggcc ggtcaatcga
     3121 ctggagtaag gtctggagcc cgtaacgccg gtagtcgatc cagctatggg cgccttcgta
     3181 catcagcgaa taccgcttgt tgtagagcaa ctcggccagg agcgacggct gatctacggc
     3241 gccagcgtag gggggcagac cgcctgacgt ctgccgcacc gtgttgatat ccgtgaccgc
     3301 cgtgacgaaa tcgcccaccc cgatgctggc ctcggcccgg agaaggatca gctcctcgtt
     3361 ctttatcaag gggatcggcg tgctcgggct gggatagcgg atccagccaa gatccgaggt
     3421 caggagctga accggatcgg tattcgttgt cccaccggac ctcgggggac gcttcaccag
     3481 cttagtgaga tagcgattgt cccgcgcccc acccacctgc agctgggcct gagtctccag
     3541 cgtcgggtga ccgaagttct cgctggtctg atcactgacc gcaagcgggt tggcgacatc
     3601 ccccgggcca gtgccgaagt ccatgtaaac gccaagagcg agcggggctg ccgaattgac
     3661 gaacgactgg ctcagatagg tcagcgcgcc ggtgaaatca ccccgataca cggcgacccg
     3721 agcccgcaac gcgcggttga acttgaggaa cgtcgccgtg ctgtcgaagc ccgcaaaccc
     3781 gggtgggagg gtgaagggaa aggccaggcc ctggagctcg gtggcgccct gatcgagcaa
     3841 agtgatcaca tgggcccagg cttcggcgtt gctgacgaac ggcgcgggag gcgcgccggc
     3901 atctctgccc acgtcaatcg gaatctgatc ctggttgtgg cagtccagga tgatcatgaa
     3961 gttgtacgcc tgcagcgtgt gggcaaaccc gctcaccgcg ctctgctcct ccggggtgag
     4021 cgtgctcgcg gtcccgatca ccgcgaggag atcgttggcg ctccggatgg cggaatactc
     4081 ctcgagccaa tgatcgccgc cgaaggcgcg gcttcccgga tccagcgggc cctgcatcaa
     4141 ttcctggacg aagcggggat cggccgggtc gattcggtac gcctccctcc cgaagatcgc
     4201 gccgtcgagc gcccagtcgg ccacgtcctg acgagtcgcg atcaggattc cgttggcggc
     4261 agcgccgacc tgcgcggccg acgggttctc gccgatcacg ctggggctgt tcgggttcgc
     4321 gatgtcgtag ttgcaagcgc ccacactcac aaatgccagc agcagcgccg cacgggtcgg
     4381 tttgatgggc atcatggtca gaaccccaag tcgatcgaga agaagaagct gcgactcggc
     4441 gggaacggag ccacgtcgat gttccgcacg atcgcctggt tggcgaagtt gcttacttcc
     4501 gggtccagcc cacggtaggg cgtaaagcgc agcaggttcc tcccggtcag agacagccgg
     4561 gcgtaccgga tgccgcgacc gaacagactg gaggccagtc ggtcgggcag gttatacgac
     4621 agattcactt ctcgcagctt gagatagctt ccgtcttgca catagggata ggtgaaaccc
     4681 tgtccgagga ggttgaaccg ggccgccccg tctgcggtgt aatccttgct gaccgccccg
     4741 ttgtcgtaga ggaactcggt caggttgatg atgtcgcccc cgtgcttcca gtcgaagagg
     4801 aaaccaaggg tgaagcggcg gaagtcgatg tcgttggaga aggtcatttg gaaatcgggg
     4861 ttggcatcac cgaccttacc cgggatcccg ttcccagcgg catcgttgcc gactgtccca
     4921 aagatctggg tcggcgagct gtcctgctcg atttggtaag tacccaggaa cagtgcgaag
     4981 ccgccggtct ggaatggagg cacgttcagg ctcgtaatct tggcgcggtt ggcgaagaac
     5041 gtggtgcgga agacccagtt caagtcccga ctctgaaccg gctggagcgt gagtgacgcc
     5101 tccacgcccc ggttccgcag cgagccaccg ttgccgaaga cgcgaagctc ctgcccgacc
     5161 gatggcgcga cggtctgctc caggatgaga tcgcgaatgt tccgctgata tagggtcaga
     5221 ttcagctccg cgcgaccgtt cgcgagcgtg gcgtcaatac cgccctcgaa ctcctcctgc
     5281 cgctccggct ggatttgggg atcgccggct cgattgttga tgtaggtgcc
//
LOCUS       DASYRV010000406         2663 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2577819, whole genome shotgun sequence.
ACCESSION   DASYRV010000406 DASYRV010000000
VERSION     DASYRV010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2663
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2577819"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..1493)
                     /gene="trmFO"
                     /locus_tag="VGQ24_10955"
     CDS             complement(72..1493)
                     /gene="trmFO"
                     /locus_tag="VGQ24_10955"
                     /inference="COORDINATES: protein motif:HMM:NF003739.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate--tRNA-(uracil(54)-
                     C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO"
                     /protein_id="HEV8455405.1"
                     /translation="MNATVVGGGLAGSEAAWALAERGVRVTLCEMRPKTKTPAHQTDR
                     LAELVCSNSFKSVELSNAHGLLKAELRALGSILLPCADGARVPGGTALAVDRELFSRA
                     VHKQVIAHPNITLTRQEMDELPSPGVIATGPLTSQRLAGALTARLGSSALAFYDAIAP
                     VVSSDSLDHARLYPLSRYGKGEGDDYLNAPLDAAAYEAFIDALIVADQFHGHEFDEVP
                     YFEGCLPVEEMARRGRETLRFGPMKPVGLPDPRTGREPYAVVQLRREDRAGQMWNLVG
                     FQTRLRIPEQQRVFRMIPGLEAAEYLRYGSIHRNSYLNSPASLGPGLTAKDDDRLFFA
                     GQITGVEGYTESLGTGLLAGINLARRLQGLPVAIPPATTMLGGLYRYLREADPQHFQP
                     MNANFGLLDPLPGKVKKDRKKELLVERAQADFAAWLEESEILFFAGASAKPHHEGTKD
                     TKVTKGQMKIATANKPKLTRNKQ"
     gene            complement(1490..>2663)
                     /locus_tag="VGQ24_10960"
     CDS             complement(1490..>2663)
                     /locus_tag="VGQ24_10960"
                     /EC_number="5.6.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF013311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA topoisomerase"
                     /protein_id="HEV8455406.1"
                     /translation="LESDQYRLYQLIWQRFVASQMTPAVYDMTIVDFDLGEYLFRASG
                     SVLVFDGYHVLYTEGREKEEGKTMDDLSPIPPLVVGDQVEVREITPSQHFTEPPPRFS
                     EASLVKELERLGIGRPSTYSAIISTLSAREYVRVDQRRFFPTDLGETVEKIMISKFPE
                     IFNVEFTSEMEEELDRIEDGELKWQRVLRDFYGPFVKALDAVDMKALVADAHGLNPAE
                     LAKERCPKCGSPIELRTGRFGPYLACIKYKDACDYVKSLKRNKVPDRPSDEKCHLCGS
                     AMVIKTGRFGEFLACTTYPKCKGTRSIPMGLKCPKCADGDLTERRTKRGKSFWGCLRY
                     PACDFSTWNRPVPETCPSCGWLGMEKKISKADGESRTCLKCGHYIVVAEPGEVALA"
BASE COUNT          444 a          858 c          859 g          502 t
ORIGIN      
        1 acacgaagaa catccacaat ttgtctgtca tcactcaccg gtcattctgc agtattttgg
       61 gttcttgttt gtcattgttt gtttctagtg agttttggtt tgttcgccgt cgcgatcttc
      121 atttgcccct tcgtgacctt cgtgtccttc gtgccttcgt ggtgaggttt ggccgaagct
      181 ccggcaaaaa agagaatctc cgattcctcc agccatgccg cgaaatcagc ctgcgcccgc
      241 tcgaccagca gctccttctt gcgatccttc tttaccttgc ctggcaacgg atccaataac
      301 ccgaaattcg cattcatggg ctgaaagtgc tgcgggtcgg cctcccggag atagcgatag
      361 agcccgccga gcatggtcgt cgccggcggg atcgccaccg gaaggccctg aagccggcgc
      421 gcgaggttga tccccgccag gagtccggtg ccgagcgact cggtgtaacc ctccacgccg
      481 gtgatttgac ccgcgaagaa gagccgatcg tcatccttgg ccgtgagccc tggccccagg
      541 ctggccggac tgttcaggta cgaattccgg tggatgctgc cgtagcggag gtactcggcc
      601 gcttccaggc ccgggatcat ccggaatacc cgctgctgct ccggtatacg gagccgggtc
      661 tgaaaaccca ccaggttcca catctgcccc gcgcggtctt cccgccggag ctgtaccacc
      721 gcatagggct cccgcccggt ccggggatcg ggcagtccca ccggtttcat cggcccgaag
      781 cggagtgtct cgcggccgcg ccgggccatc tcctcgaccg gcaggcagcc ctcgaagtag
      841 ggcacctcgt cgaactcatg accgtggaat tgatcggcga cgatgagcgc atcgatgaac
      901 gcctcgtacg ccgcggcgtc gaggggggcg ttcaggtagt cgtcgccctc gcccttgccg
      961 tagcgggaca gtgggtacaa ccgtgcgtgg tcgagcgagt cggaggatac caccggcgcg
     1021 atggcgtcgt agaaggcgag cgccgaggag ccgagccggg ccgtgagagc gccggcgagc
     1081 cgttgcgagg tcagcggccc ggtggcgatg acgccagggg aggggagctc gtccatctcc
     1141 tggcgcgtga gcgtgatgtt gggatgggcg atcacctgct tatgcacagc acgggagaac
     1201 agctcgcgat cgacggccag tgcggtgccg ccggggacac gcgctccatc ggcgcacggc
     1261 agcaggatgc tccccagggc ccgcagctcg gccttgagca gcccgtgggc gttgctgagc
     1321 tccaccgatt tgaaggagtt gctgcagacg agctcggcga gacgatcggt ctggtgagcg
     1381 ggagtcttcg tcttcggacg catctcgcag agcgtcaccc ggacgccgcg ctccgccagc
     1441 gcccacgctg cctccgaccc ggcgagacct ccgccgacaa ccgtggcgtt cacgccagag
     1501 caacctctcc cggttcggcg accacgatat agtggccgca cttgaggcag gtacggctct
     1561 caccgtcggc cttgctgatc ttcttctcca tgccgagcca gccacagctg gggcaggtct
     1621 ccggcaccgg ccggttccag gtggagaaat cgcatgccgg ataccgcagg cacccccaga
     1681 atgacttgcc ccgcttggtg cgccgctcgg tgagatcgcc atcggcgcac ttggggcact
     1741 tgagccccat cggaattgat cgggtgccct tgcacttcgg gtaggtggtg caggccagga
     1801 actcgccgaa ccggccggtc ttgatgacca tggccgagcc gcagaggtgg cacttctcgt
     1861 cgctggggcg gtcggggacc ttgttgcgct tcagcgactt cacgtagtcg caggcatcct
     1921 tgtacttgat gcatgcgaga tacggcccga agcgaccggt gcggagctcg atcggcgagc
     1981 cgcacttggg gcagcgctcc ttggccagct ccgctgggtt cagtccgtgg gcatcggcca
     2041 cgagcgcctt catgtccacc gcgtcgagcg ccttgacgaa cgggccatag aagtcccgca
     2101 gcactcgctg ccacttgagc tccccgtctt cgatccggtc cagctcctct tccatctcgg
     2161 aggtgaactc gacattgaag atctcgggga acttactgat catgatcttc tcgacggttt
     2221 cgcccaggtc ggtcgggaag aagcgccgct gatccacccg cacgtactcg cgggcggaca
     2281 gggtcgagat aatggcgctg taggtggacg gccggccgat gcccagccgc tcgagctcct
     2341 tgaccaggct ggcctcggag aagcgcggcg gcggctcggt aaagtgctgc gacggggtaa
     2401 tctcccggac ctccacctgg tctcccacga ccagcggcgg gatgggggag agatcgtcca
     2461 tggtctttcc ttcttccttc tcccgtccct cggtgtagag cacgtggtag ccgtcgaaca
     2521 ccagcaccga tcccgacgcg cggaacaggt actcgccgag atcgaagtcc acgatggtca
     2581 tgtcgtagac ggccggcgtc atctgcgagg cgacgaaccg ctgccagatc agctggtaga
     2641 ggcggtactg gtcggactcg aga
//
LOCUS       DASYRV010000407         7607 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1002260, whole genome shotgun sequence.
ACCESSION   DASYRV010000407 DASYRV010000000
VERSION     DASYRV010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7607
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1002260"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /locus_tag="VGQ24_10965"
     CDS             complement(<1..368)
                     /locus_tag="VGQ24_10965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455407.1"
                     /translation="MSEGPPGRIDRAALERIIQRAAELQTAEREIGDTLTSDELLALG
                     REVGIPVRYLQQALLEERTRVGPLAPAGLIERVAGPGQVTAQRVVPAEAEVVEQQLVR
                     WMETSELLCVQRAQPGRITW"
     gene            complement(370..1233)
                     /locus_tag="VGQ24_10970"
     CDS             complement(370..1233)
                     /locus_tag="VGQ24_10970"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="slipin family protein"
                     /protein_id="HEV8455408.1"
                     /translation="MDFLIPSLAVAVLYSFLSLRVLRQYERGVTFFLGRFWGTKGPGL
                     IFLPAGFASQKRVSLRIAAVDIPPQDVITRDNVSVKVNAVLYMRVSEPAKAVIEIEDY
                     MYATSQLAQTTLRSVLGEVELDELLSDREKINAVLKKIIDERTEAWGIEVSAVEVKDV
                     DLPDQMKRAMARQAEAERERRAKVIAAQGELQASEALAQAARTLATEPSAIQLRYLQT
                     VIEIAAENNSTTIFPIPIELFRPFLNQAAAPAAKPASQSEPAGAALPASEISSLMSQM
                     RLQAAKTSAQE"
     gene            complement(1244..2455)
                     /locus_tag="VGQ24_10975"
     CDS             complement(1244..2455)
                     /locus_tag="VGQ24_10975"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HEV8455409.1"
                     /translation="MSSHQSAREVVFLSGARTGFGTFGGALKDFSATDLGTIAARAAL
                     ERGGVEPKSVDHVVFGNVLQTSADAIYLARHVGLRAGAPIETPAVTVNRLCGSGFEAV
                     AQAAQQIVLGESDLVLAGGTESMSQAPHVVRGARWGLRLGPAAPLEDTLWEALRDPGC
                     GLSMAETAEKLAEQYRISRQAVDCYAARSQACAAAAWESGVFAEEIVPVPIQNRKTRQ
                     TEPWAADEHMRPGTTVDALAKLPPYFKKGGVVTAGNASGICDGAAALLLASGQFAADR
                     GLRPLGRLLAWASAGVEPSIMGIGPAPAARKALARAGLKLDDMDLVEVNEAFAAQYLA
                     VEQELGLDRERTNVDGGAIAIGHPLGASGARITLHLLHALRRRGARYGLGSACIGGGQ
                     GAAVIVEAFSS"
     gene            complement(2829..3320)
                     /locus_tag="VGQ24_10980"
     CDS             complement(2829..3320)
                     /locus_tag="VGQ24_10980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455410.1"
                     /translation="MARKNMVRAAITLACLSVCLPLLVRAQSAVDTTWADSTDVLILD
                     HDFTGPNEFARVFLQDGQVYRAELSSPDVTLHIRGLVRTTQLPRIYPFLPSDTPGGTS
                     IVEVYPQLDAEYEIRSVGSSGSAISTRMRLYRDVKASRRRYLVRNTPGWEIGGSTPSP
                     ACV"
     gene            3684..3890
                     /locus_tag="VGQ24_10985"
     CDS             3684..3890
                     /locus_tag="VGQ24_10985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455411.1"
                     /translation="MDDPQVGIGIQCFCRELRLNIVRLGAGEPTLAGAQADENELIIL
                     AGLELKSPTVGPVRKNRLADLSRR"
     gene            complement(3971..5317)
                     /locus_tag="VGQ24_10990"
     CDS             complement(3971..5317)
                     /locus_tag="VGQ24_10990"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HEV8455412.1"
                     /translation="MKGFVGISVTALLVAGCGDGPGGTSDLDTQVREALAEANVTPLS
                     PLPAKDPALVRLGQALMFDKVLSGNRDISCGTCHNPAAGTSDRLSLAIGTGGVGSAGS
                     RVLSGASQFIPRNSQELFNRGYAAFADMFWDGRVSQAGNGDFDTPAGTQLPAGLSGAL
                     AAQAMFPVTTRLEMRGQAGDLDRFDAPNELAQFGDDERPAIWAALMNRLLAIPEYVSM
                     FQAAYPAVAPPELGFQHAANAIAAFEVETFTSVNSPLDRYVRGDDGALSEVETRGALL
                     FFGKAGCGSCHLGPQLTDQQFHSIGVPQVGPGLAPESPEDHGRERVTGGAGERYQFRT
                     PPLRNVELTGPYMHDGAYTTLEAAVRHYLNTATALRAYDASQLREDLRPSHVSDPSTL
                     DAMAATLDALVQAPLALSDTEVDDLVTFLKSLTDPAARDLSGAIPPSVPSGLPVGD"
     gene            complement(5314..5688)
                     /locus_tag="VGQ24_10995"
     CDS             complement(5314..5688)
                     /locus_tag="VGQ24_10995"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HEV8455413.1"
                     /translation="MRRSHRWLLPCLAFLLAGCGDGPAGTGETPPSSVAINVGNVFFR
                     SVHNGSTDPALDTVAAGGTVTWTWIETGTHSVRFDDAGLPESPAFSDGGSVFSMAFPA
                     AGTYTYDCGIHGPVMAGTIVVK"
     gene            complement(5910..6527)
                     /locus_tag="VGQ24_11000"
     CDS             complement(5910..6527)
                     /locus_tag="VGQ24_11000"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: protein motif:HMM:NF012304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease H"
                     /protein_id="HEV8455414.1"
                     /translation="MTVSVVHLDESCLGNGREGDNPGGAGALIEVRSQGRIQRRDFYL
                     HVPATTNNRMALIGASTGLRLMAAKGKRMHVLMVSDSEYLVKGMREWVPGWVGRGWTR
                     KSGPIENLALWQELAAAARLHEVQWTWVRGHRGHPKNEYANDLAVAAARERITSDGAV
                     ESGLGEWLARKQARGLFIGYDPDAAFEALERRLTAGESFPLADEV"
     gene            complement(6524..6748)
                     /locus_tag="VGQ24_11005"
     CDS             complement(6524..6748)
                     /locus_tag="VGQ24_11005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455415.1"
                     /translation="MSPIRWTTDRMDQLENAARRGLRVALSRRGTEYIVVAIRVTSID
                     QHDALIGRLPMTGEDLTFRLGEIDSFQVIE"
     gene            complement(6885..>7607)
                     /gene="selD"
                     /locus_tag="VGQ24_11010"
     CDS             complement(6885..>7607)
                     /gene="selD"
                     /locus_tag="VGQ24_11010"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004756 - selenide, water dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0001887 - selenium compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HEV8455416.1"
                     /translation="LPFDMLGELLRGATEVAQQAGCLILGGHSIDAMEPTFGMAVIGE
                     VHPDHMLTNAAACAGDRLVLTKPLGTGILATALKRDALLETGMAEAVRSMTTLNDGAS
                     RAALRVGVSAATDVTGFGLVGHLTSMLEASKVAAEIAFDTLPILPHARNLASRGIVPG
                     GTERNLEAADKVEWAADLGAADRYLCVDAQTSGGLLLAVPAENEAALLAALRDERTPA
                     AAVIGRVVAGKPGHIRVTRQLG"
BASE COUNT         1363 a         2475 c         2463 g         1306 t
ORIGIN      
        1 tcccaggtga tgcggcccgg ctgcgcccgc tggacgcaga gcagctcgct ggtctccatc
       61 cagcgaacca actgctgctc gacgacctct gcctcggcgg ggacaacccg ctgcgcggtc
      121 acctggcccg ggccggcaac ccgctcgatc agcccagcgg gcgcgagggg gccgactcgg
      181 gtccgctcct cgagcagggc ctgctggaga tagcggaccg ggatcccaac ctcgcggccc
      241 agggccagca gctcgtcgga ggtgagtgtg tcgccgatct cccgttcggc cgtttggagc
      301 tcggctgcgc gttgaatgat tcgctcgagt gcggcgcgat cgatccggcc gggtggacct
      361 tcgctcatgc tactcctgtg cggaggtctt ggcggcctgc aatctcatct gggacatcag
      421 ggaagagatt tccgatgcag gcagagcggc accggccggc tcggactggc tcgcgggctt
      481 cgcggccggg gcggcagcct gattcaggaa cggccggaac agctcgattg gaatggggaa
      541 gatcgtggtc gagttgttct cggcggcgat ctcgatgacg gtctgcagat agcggagctg
      601 tattgcgctc ggttcggtgg caagcgtacg ggccgcctga gccagggcct ccgaagcctg
      661 gagctcaccc tgtgcggcga tgaccttggc ccggcgctcg cgctcggcct cggcctgccg
      721 tgccatcgct cgcttcatct ggtccgggag atcgacatcc ttcacctcga ccgcggagac
      781 ctcgataccc caggcctcgg tgcgctcgtc gatgatcttc ttcaggacgg cgttgatctt
      841 ttcgcggtcg gacagcagtt cgtcgagctc tacttcgccc agcaccgagc gcagggtggt
      901 ctgggcgagc tggctcgtgg catacatgta gtcctcgatc tcgatcaccg ccttggccgg
      961 ttcgctcaca cgcatgtaga gcaccgcgtt gacctttacc gatacgttgt cgcgggtgat
     1021 cacgtcctgg ggcggaatat cgaccgcggc aattcgaagc gacacacgct tctggctggc
     1081 aaagccggcc gggaggaaga tgagaccggg gcccttggtt ccccagaagc gccccagaaa
     1141 gaaggtgacc ccgcgctcgt actggcgcag cacccggagg ctcaggaacg agtagagcac
     1201 ggcaacggcg agtgacggaa tgagaaaatc cataggaccg ctctcagctg gagaaggctt
     1261 ccacgatcac ggccgcacct tggccgccgc cgatgcaggc gcttccgagc ccgtaacgcg
     1321 ccccgcgtcg ccggagcgca tggagcaaat ggagagtaat gcgtgcaccg ctggccccga
     1381 gcgggtggcc gatggcgatg gcgcccccat ccacgttggt gcgctcccgg tccaggccga
     1441 gctcctgctc gaccgcaaga tactgggcgg cgaacgcctc gttcacttca acgagatcca
     1501 tgtcgtcgag tttcaggcct gcccgggcga gcgccttccg ggcggccgga gccggtccga
     1561 ttcccatgat gctcggctcg acgccagcgc tcgcccaggc gagcaagcgg cccaggggac
     1621 ggaggccacg gtcggccgcg aattgtccac tggccagcag gagggcggct gcgccatcgc
     1681 aaatgcccga tgcattcccg gcagtcacga ctccgccctt cttgaaatac gggggtagct
     1741 tggccagtgc gtccaccgtg gtgccgggac gcatatgctc gtcggcagcc cagggctcgg
     1801 tttgccgggt ctttcgattc tgaatcggga caggcacgat ctcctcggcg aatactcccg
     1861 actcccaggc tgcggcggca cacgcctgac tacgtgcggc gtagcaatcg accgcctggc
     1921 ggctaattcg atattgctca gccagcttct ctgccgtttc agccatcgaa agtccacagc
     1981 cggggtcccg cagcgcttcc cagagcgtgt cttcgagcgg cgcggcagga ccgagccgaa
     2041 gaccccagcg ggcgccccgc acgacgtggg gagcctggct catcgattcg gttccgccgg
     2101 cgagcaccag gtcggactcg cccaggacga tctgctgggc cgcctgggcc actgcctcga
     2161 atcccgagcc gcagagccgg ttgaccgtca ccgccggggt ttcgatggga gcgccggcgc
     2221 ggagcccgac atgccgagcc agatagatcg cgtcggccga ggtctggaga acattgccga
     2281 acaccacatg atccaccgac ttgggctcta ccccaccgcg ttcgagtgcg gctcgcgcgg
     2341 cgatcgtccc aaggtcggtg gcggaaaagt cctttagcgc gccgccgaag gtaccgaagc
     2401 cggtgcgtgc gccggagagg aagacgactt cacgagctga ctggtgggaa ctcacgcaga
     2461 acttccagcg aaggagagac ggacgggtca ggcatcggag gacgaaatat gagcccatgc
     2521 cgaaggcact tcaagcaatc ccgctatcgg ctactggtac caaccaatgc cgaaggtgag
     2581 tcggtcactg gtcggaatcc gagcatcccc tatcccgagc ggtctcgaga accccctgaa
     2641 cgaagcatgg gaataggagg cctggagact ccagcccgcg ccttgtggat tggttcggat
     2701 gtgtcgggcg acatacagcc ccgggccgag gacggtcggg gtgtcggagg aggccgagat
     2761 gatcccaacg ccgaaccgaa gcaggacacc aagctcccag ttcgatcggc ctggccgggc
     2821 ccgtccgatc aaacgcaggc ggggctcggt gtagagccac caatctccca ccccggcgtg
     2881 ttccggacga gataccgccg gcgtgaggcc tttacatctc tatagagacg catccgggtg
     2941 gagatagccg acccgctgct ccccacggaa cgaatctcat actctgcgtc aagctgcgga
     3001 tacacttcga cgatggaggt gccgcctggt gtatcggacg ggaggaaggg gtagatccgc
     3061 gggagctggg tcgtgcgaac cagccctctt atatggaggg tgacgtctgg cgagctcagc
     3121 tccgcccgat acacctggcc atcctgcaag aacacacggg caaactcatt cgggccggta
     3181 aagtcatggt cgagtataag aacgtctgtg ctgtcagccc atgtcgtatc cacggctgat
     3241 tgggcacgta ccagcaaagg gaggcacacc gagaggcacg ccaatgtgat tgcggctcga
     3301 accatgttct ttcgtgccat atgctagtcc ctcttcacgg cggcgccgca agtaacacag
     3361 tggcgccagg cgggctcgag ctcagtctga cactcagggc agtgagtcag cgcctggctc
     3421 gcaccgcagt gggggcagaa tttcacactc cgctctgggg ggagcttccc cctacacgcc
     3481 ctgcaaattg cgggaggtag gggtccagtc cgaggcttgc tcgaacctct cctgggcgcc
     3541 ggcggatctg gtgcggagac gggctcctca gcggcggggg gcgcgaaacg ctggtccgac
     3601 ggagcaaagg cgaggccctg ggccgggtcg agcgcgcggg ccaacagctt ttggttcagg
     3661 atgaccaccg catcctcgtg ccggtggacg atcctcaggt cgggattgga attcagtgct
     3721 tctgccgcga actccgcctg aacatcgtcc ggctcggtgc gggcgaaccc accctcgccg
     3781 gcgcacaggc ggatgagaac gagctcataa tcctcgctgg tctcgagctg aagagcccga
     3841 cggttggccc ggtacggaag aatcgtctgg cggatctctc ccgcagatag aggacgccgg
     3901 agccgggcag ggtcggcggc tgccaggttg cggacgattt gacggaagaa gcgactcagg
     3961 tcctccacgg ctaatcgccg accgggaggc cgctgggaac gctaggggga atggcgccgg
     4021 acaggtcccg cgcggcggga tcggtcaacg attttagaaa cgtcacgagg tcgtcgacct
     4081 cagtgtcact gagtgcgagc ggcgcttgga ctaaggcatc gagcgtggcc gccatggcgt
     4141 cgagcgtcga ggggtcggaa acgtgagacg gccggaggtc ttcccgcagc tgcgaagcat
     4201 cgtaggcgcg caaggccgta gccgtgttca aatagtgccg gacagcggcc tccaacgtag
     4261 tgtacgcccc gtcgtgcata tagggcccgg tcagctccac gttcctgagc ggcggggtgc
     4321 ggaactggta ccgttcaccc gctccgccag tgactcgctc acgcccatgg tcctccggac
     4381 tctcgggagc taagccgggg ccgacctggg gtaccccaat gctgtggaac tgctggtcgg
     4441 taagctgagg ccccagatga caggatccac agcctgcttt cccgaagaac aggagagcac
     4501 cgcgtgtctc cacttcactc aaggcaccgt cgtccccgcg aacgtatcga tccagcgggg
     4561 agttcacgct ggtgaacgtt tccacctcga atgccgcgat ggcattggcc gcgtgctgaa
     4621 atccgagctc cggcggagca acggctggat aggccgcctg gaacatcgag acatactccg
     4681 gtatggcgag cagacgattc atgagagccg cccagatggc ggggcgctcg tcgtcaccga
     4741 actgcgccag ctcattggga gcgtcaaaac gatcgaggtc gccggcctgg ccccgcatct
     4801 ccaacctggt cgtcaccgga aacatcgcct gcgccgcgag cgcaccggat aggccggccg
     4861 gcagctgagt gcccgcaggg gtgtcgaagt cgccattgcc ggcctgagag actcgcccat
     4921 cccaaaacat gtcggcaaat gcggcgtacc cgcggttgaa gagctcctgc gaattccgcg
     4981 gtatgaactg ggaagcgccg gagaggactc gagacccggc ggaacccacg ccgcccgtgc
     5041 cgatcgccaa ggagagtctg tctgatgtgc cggctgctgg gttgtggcag gtgccgcagg
     5101 agatgtcgcg gttgccgctc agtaccttgt cgaacatcaa ggcctggccc agccgcacca
     5161 gggcagggtc cttcgccggc agcggggaca gcggggtcac attggcctct gccagggcct
     5221 cacgcacttg cgtatcgagg tcactggttc cgccgggccc atcaccacag ccggcgacca
     5281 ggagagccgt aacggagatc ccgacgaacc ccttcatttc accacgatgg taccagccat
     5341 caccggccca tggatcccgc aatcgtaggt gtaggtgccg gctgccggga atgccatgct
     5401 gaatacgctt ccgccatcgg aaaacgcggg gctttcgggc aagccggcat cgtcgaaacg
     5461 cacgctatgg gttccggtct cgatccaggt ccaggtaacg gttccgcctg ccgccaccgt
     5521 atccagcgcc ggatcggtgg acccgttgtg gacgctccga aagaagacat tccctacgtt
     5581 tatggcaacg ctcgacggcg gagtttctcc ggttccagcc gggccatcgc cacagccggc
     5641 caggaggaag gcaagacaag ggagcaacca tcggtgtgaa cgcctcatcc ggttgtaccg
     5701 cctcaaggtc cgtcaggaga tcaggttcag ggtagggtat cgggtcggtg ccacagtctc
     5761 agtgatgcgg gccacccaca ctctgtcccc ccggcggtgc cgctcgcgtt cagccgggcc
     5821 gaggctcccg ggattacgca ggttttgtgc tggaagggag ctgggtgccg ccgaattgat
     5881 ggcggcttcg gcctgatcgg gctttccttt tatacctcgt cggcgagggg aaagctctcg
     5941 ccggcggtga gccgccgctc gagcgcctcg aaggctgcgt caggatcata gccgataaac
     6001 agcccgcggg cctgcttcct ggccagccac tcgcctaagc ccgactccac tgcgccgtcc
     6061 gaggtgatgc gctccctggc cgcggcaact gcaaggtcgt tggcatactc gttcttcggg
     6121 tgcccccggt gtccccggac ccaggtccac tgcacctcgt gcagccgggc agcggcggcc
     6181 agctcctgcc acagggcgag gttctcgata gggcccgact ttcgggtcca cccccggccc
     6241 acccatcccg gcacccactc ccgcattccc ttcaccaggt actccgagtc ggagaccatg
     6301 aggacatgca tacgcttccc tttggcggcc atcagtcgca agccagtgct ggccccgatg
     6361 agcgccattc ggttgttggt cgtggccggc acgtggagat agaaatcacg tcgttgaatc
     6421 cgcccctggc tccgcacctc gatgagcgct ccggccccac ccggattgtc tccttcccgt
     6481 ccgttgccga ggcagctctc gtccagatgc accacgctga cggtcactca atcacctgaa
     6541 agctgtcgat ctcgcccagg cgaaacgtga ggtcctcacc ggtcatcggt aacctgccga
     6601 tcagcgcatc gtgctggtct atggaggtaa cccgaatcgc caccacgatg tactcagtgc
     6661 cgcgccggga cagcgcgacc cggagccctc gccgggcggc gttctcgagc tggtccatgc
     6721 ggtcggtggt ccaacggatt ggcgacatct tgatccagca ccccccattc caatgaaaac
     6781 aaatcacgaa agcacgaaat tacgaaagca cgaaaaacaa gaacatccat tgccttcgtg
     6841 ttttcgtgtt ttcgtgtttg ctctttcacc tatccggcta catctcagcc gagctgtcga
     6901 gtgactcgga tgtgacccgg cttgccggcc accacgcgac caatcaccgc cgctgcaggg
     6961 gtgcgctcat ctcgcagcgc tgccagcaag gctgcctcat tctcggccgg taccgccaga
     7021 agcaggccgc ctgaggtctg ggcatccacg cacaggtatc ggtctgcggc tcccaggtcg
     7081 gctgcccact ccaccttgtc cgcagcctcg agatttcgct cggtgccgcc cggcacgatg
     7141 ccgcgggaag ccagattccg cgcgtggggc agaatgggga gagtgtcgaa ggcgatctca
     7201 gccgcgacct tactcgcctc cagcatgctg gtgagatgtc ccaccagccc gaaaccggtt
     7261 acatcggtgg cggcgctgac tcctacgcgc agggccgctc gggatgctcc gtcgttcagg
     7321 gtagtcatcg agcggaccgc ctcggccata ccggtttcga gcagcgcgtc ccgcttgagc
     7381 gcggtcgcca ggatgccggt ccccagcggt ttggtcagga ctaaccgatc tccggcacac
     7441 gcggcggcgt tggtcagcat gtggtccggg tgcacttcac cgatgaccgc catgccgaag
     7501 gtgggctcca tcgcatcgat cgagtgacct cccaggatga gacagcccgc ttgctgggcc
     7561 acctcggtgg ccccacggag gagctcgccc agcatgtcga atggcag
//
LOCUS       DASYRV010000408         4527 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3202145, whole genome shotgun sequence.
ACCESSION   DASYRV010000408 DASYRV010000000
VERSION     DASYRV010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4527
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3202145"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..525
                     /locus_tag="VGQ24_11015"
     CDS             <1..525
                     /locus_tag="VGQ24_11015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455417.1"
                     /translation="SGNVFFLWGHDENFFEWASANITWLELTLDWRPTPKLRVNGLYR
                     LQYVGRRTDGSTVDLWRSPRLKVEYQLSRPIFLRLVGEYTTERRDALRDDTRTGAPIL
                     ILDPDANSYLRAAAFGHRSFRGDFLFSYQPNPGTVLFAGYGSTLRDPTELGSASLRRA
                     EDGFFLKLSYLFQM"
     gene            776..1951
                     /locus_tag="VGQ24_11020"
     CDS             776..1951
                     /locus_tag="VGQ24_11020"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF016242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEV8455418.1"
                     /translation="MTAVHAPPAVARDELIVLGGADRLQADVWNQLARRGFHLHQWFT
                     GAERSGWNPRHLAVQGVSGLKTIIPAYLVGPGMPHDLHHRWLGPLGDVAAYAGFRLQP
                     VLSVQAPFAPVSAPLGNSSGLSNAILHEIFYALEQTAEGEGANAVAWPFVDTGCDRLI
                     EVARDRGYAVLYAGATATLRVRWPSFEQYVASRSPDVRRTIQADIASIGGAGLRTTVT
                     SEFECDASHMDRLYRDAFRRQNGRESPVAPHFFQQLGRRPTPAIWAHQTWHGDRLVGT
                     SLNLTTPERLDGTFAAFTPEHRSSGVFYNDLCYEPLRVAIREDVSSIDLGPTGLHAKV
                     LRGAVLQRRMILIRGTTPRRHRLLSMLGRWVARRTQREERKALGSLWGPRCFVEMDY"
     gene            2206..3099
                     /locus_tag="VGQ24_11025"
     CDS             2206..3099
                     /locus_tag="VGQ24_11025"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEV8455419.1"
                     /translation="MTQVQSIPAVTPIEKRGYAHPEVLVSTAWVDQHLSDPKVRLVES
                     NEDLLLYDTGHIPGAVKIDWTNDLNDPVIRDYVDRDRLERILRARGIDQDTTIVFYGD
                     KNNWWATYALWVLQLFGVKNVKVMDGGRLRWVDEGRPLTTDQPKYREGNIKVGKRDDS
                     KIRAFRDEVLEHLKKKGQLVDVRSPEEFRGEKTHMPEYPQEGCLRGGHIPGAKSIPWA
                     KAIDPDTHTFRPASELKKLYEQDNNLRGNAETIAYCRIGERSSHTWFALTYLLGFEKV
                     RNYDGSWTEWGNAVRLPVEKG"
     gene            complement(3283..>4527)
                     /locus_tag="VGQ24_11030"
     CDS             complement(3283..>4527)
                     /locus_tag="VGQ24_11030"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEV8455420.1"
                     /translation="EAERLCRSLVADYPDDVEAWLQLGEVLVHGNPLRGRSSVEARPA
                     FEQVLARDPDNGEALIHLARIASIEGKRQEVDTLVRRARAAVQGSEVVETRAFRTFVL
                     GDRPGQKRVTQRILANPGGVPVVTALDVAVMTGNLEGSERFGRWLAGTSQAPDLRAYG
                     HRMLAQAALARGQWRRARSELTVAARLDSIPALELRSLFASFSFLPLPRSEILAVREA
                     VRRWNAGSEPGGQVGHTAAHAGLHPYLRLHRLGLLDARLGDTTGALHEARALDHAADS
                     SHTGRLAHTLAQSIRAHVAAAGGRAREALADLDAAGWEAAASVFVGEAYDRYFRAELL
                     ERVKREDEALGWFRSIAERAAYELVYLAPSHLRQAEIYDRRGQRDLAVQHYRRFIELW
                     GDADPELQPVVAEARSRLAELQ"
BASE COUNT          769 a         1516 c         1501 g          741 t
ORIGIN      
        1 tccggcaatg tctttttcct gtggggacac gacgagaact tcttcgagtg ggccagcgcc
       61 aatatcacct ggctggagct cacgctcgat tggcgcccca cgccgaagct cagggtcaac
      121 gggctctacc ggctgcagta cgtcgggcgg cggaccgacg gcagcaccgt cgacctctgg
      181 cgaagccccc ggctcaaggt ggagtatcag ctatcccggc cgatcttcct ccgactggtc
      241 ggcgagtaca ccaccgagcg gcgggatgcg ctccgggacg acacccgcac cggggccccg
      301 atcctgatct tggatccgga cgccaacagc tacctccgcg cggccgcgtt cggtcatcga
      361 tcattccgcg gtgattttct cttctcctac caaccgaacc cgggcacggt gctgttcgcc
      421 ggctatggca gcacgctccg cgaccccacc gagctcggca gtgcaagtct tcgccgggcg
      481 gaggacggtt tcttcctcaa gctgagttac ctgtttcaga tgtaggctct gcgccacaga
      541 gtggggaatc ggccggcgat ccgcgcccag gcctggcgcg aggccctacc gtcctcggga
      601 tgtacagtac aagttctact atcccaaggt ttttgagtgg ccaggtgccg gctcgcggcc
      661 cggggtcctg gagaggggtg gagggtggcg tatctcttgc ccgtgagggc gccggatcgc
      721 ttcgacccac tcacccgaac gatcgcccgc cgcttcccgg agccgccacc gcgtcatgac
      781 cgctgtccat gctcctcccg ctgtcgcccg cgatgagctg atcgtactcg gcggagcgga
      841 tcggctccag gccgacgtgt ggaaccagct ggcccggcgg ggattccact tgcaccagtg
      901 gttcaccggc gcagagcggt ccggctggaa cccgagacac ctggcggtgc agggtgtatc
      961 cgggctcaag accatcatcc cggcctatct ggtcggacca gggatgcccc acgatctgca
     1021 ccaccgctgg ctggggccgc tgggcgatgt cgccgcctac gccggcttcc ggctccagcc
     1081 ggtgctctcg gtgcaggcgc cgtttgctcc cgtctccgcg ccgctgggca actcgagcgg
     1141 gctctccaac gcgatcctgc acgagatctt ctacgctctg gagcagaccg ccgaagggga
     1201 gggcgccaac gccgtggcct ggcccttcgt ggacaccggt tgcgaccgcc tgatcgaggt
     1261 tgcccgcgat cggggttacg cggtgctcta tgccggtgcc acggcaacac tccgggtacg
     1321 gtggccctcc ttcgagcagt atgtcgcgag ccgaagtccg gacgtgcggc gcaccatcca
     1381 ggcagacatc gcctcgatcg gcggtgccgg gctgcggacc acggtgacca gcgaattcga
     1441 gtgtgacgcc tcccacatgg accgactgta tcgcgatgcc tttcgccggc agaacggacg
     1501 ggagtcgccg gtcgcccccc atttctttca gcagctcggc cggcggccga cgcccgcgat
     1561 ctgggcgcac cagacctggc acggcgaccg gctggtcggc accagcctga atctcaccac
     1621 gcccgagcgc ctggatggaa ccttcgccgc cttcaccccg gagcatcgca gcagcggagt
     1681 cttctacaac gacctctgct acgagcctct gcgggtggca atccgggagg acgtctcgtc
     1741 catcgatctg ggacccaccg ggctccatgc caaggtgctg cgcggcgcgg tgcttcagcg
     1801 ccggatgatt ctgattcgcg ggacgacgcc ccggaggcat cgcctgctgt ccatgctggg
     1861 tcggtgggtt gcccgccgga cccagcggga ggagcggaag gcgctggggt cactctgggg
     1921 tccccggtgc ttcgtggaaa tggattattg acattccgac ttaccaagtc gtactttgaa
     1981 aaaccggaca ccactgatgc caatcatgcc gcgtcacgcc gttcttcccg cgcccttcgg
     2041 gtgctgctgt accaccgagc cacttcggct cgagggggag acagccgcga cgcgctgatc
     2101 gcagggcgct tgcagaattc cgccggccgc acctccccag aggtccgcgg ccggtctgcg
     2161 ttttgggcag gatgagaggt acgtgagcct actaaggaga gaatcatgac acaggtacaa
     2221 tcgatccccg cggtcacccc gatcgaaaag cgcggatatg ctcacccgga agtattggtc
     2281 tcaaccgcgt gggtggacca gcatctgagt gatcccaagg tccggctggt ggagtcgaac
     2341 gaggacctcc tgctctacga taccggacac atccccggag cggtgaagat cgactggacc
     2401 aacgatctca acgatccggt gattcgcgac tatgtggacc gggaccggct cgagcgaatt
     2461 ctccgcgcga gagggatcga ccaggacacc acgatcgtct tctacggaga caagaacaac
     2521 tggtgggcca cctacgccct ctgggtactc cagctcttcg gggtgaagaa cgtgaaggtg
     2581 atggacggcg ggcggctgcg ctgggtggac gaggggagac cgttgacaac cgaccagccc
     2641 aagtaccggg aggggaacat caaggtcggg aagcgggatg attccaagat ccgcgccttc
     2701 cgcgacgagg ttctcgagca cctgaagaag aagggtcagt tggtggacgt gcggagcccg
     2761 gaagagttca ggggcgagaa gacccacatg ccggagtacc cgcaggaggg ctgcctccgg
     2821 ggtggtcaca ttccaggggc caagagcatt ccctgggcga aggcgatcga tcccgatacc
     2881 cacaccttcc ggccggcgag cgagctcaag aagctctacg agcaggacaa caatcttcgg
     2941 gggaacgcgg agacgatcgc ctactgccgg atcggcgagc gctcgtcgca cacctggttc
     3001 gcgctgacct atctgctcgg gttcgagaag gtacggaact acgacgggtc ctggaccgag
     3061 tgggggaatg ccgttcggct gccggtggag aagggttgag ggcggtaagg cggtaaggcg
     3121 gtagggcggt acggcggtag gaaaaaacaa ggctcctcat cccgagggag tgaaacgacc
     3181 gagggaccta gccagcgaag ctcaaatacc tgctgagtag gtccctcgtt ggcactcggg
     3241 atgaggattc atcttactgc cgtatcgtcg taccgccatg gctcactgca actccgccag
     3301 ccggctgcgc gcctcggcga cgactggctg gagctccgga tccgcgtcac cccagagctc
     3361 gataaacctg cggtagtgtt gcaccgccag gtcgcgctgg ccccgccggt cgtagatctc
     3421 ggcctggcgg agatgagacg gcgccagata aaccagctcg tacgcggccc gctcggctat
     3481 ggaccggaac cagccgagcg cctcgtcctc ccgcttgacc cgctcgagca gctccgcccg
     3541 gaaataccgg tcgtaggcct ccccgacgaa caccgaggcc gcggcctccc accccgccgc
     3601 atccagatcc gccagcgctt cccgagctcg accgcccgcc gcggcgacgt gggcccggat
     3661 gctctgcgcc aaggtgtggg caagccggcc ggtgtgggat gagtcggcgg cgtgatcgag
     3721 cgcccgcgcc tcatgcaagg cgcccgtggt gtcgcccagg cgggcatcca ggaggccgag
     3781 ccgatggagt cgcaggtagg ggtgaaggcc ggcatgcgcg gcggtgtgtc ccacctgtcc
     3841 ccccggctcg gatcccgcgt tccaccggcg gaccgcttcg cgtaccgcga ggatctcgct
     3901 ccgggggagc ggcaggaatg aaaacgacgc gaacagcgag cgcagctcca gtgccggtat
     3961 cgagtcgagc ctggcggcga cggtgagctc gctccgggct cggcgccatt gcccgcgcgc
     4021 gagtgcggct tgggccagca tccggtgtcc ataggcccga aggtcaggag cctgggaggt
     4081 cccggcaagc cagcgcccga accgctcgct gccctccagg ttgcccgtca tcaccgccac
     4141 gtcgagggcg gtgaccaccg ggaccccgcc gggatttgcc aggatccgct gggtgacccg
     4201 tttctgtccc ggccggtcgc ccaggacgaa ggttcggaac gccctggtct cgaccacctc
     4261 cgatccttga accgccgcgc gggcccggcg caccagggta tcgacctcct gtcgcttccc
     4321 ctcgatcgag gcgatgcggg ccaggtggat cagcgcctcg ccgttgtccg gatcgcgggc
     4381 gagtacctgc tcgaatgccg gccgcgcttc tacagaagaa cgcccccgca gcgggttgcc
     4441 gtgcaccagc acctcgccca gctggagcca cgcttcgacg tcgtcggggt agtcggccac
     4501 caggctccgg cagaggcgct cggcctc
//
LOCUS       DASYRV010000409         1727 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_4104744, whole genome shotgun sequence.
ACCESSION   DASYRV010000409 DASYRV010000000
VERSION     DASYRV010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4104744"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            172..450
                     /locus_tag="VGQ24_11035"
     CDS             172..450
                     /locus_tag="VGQ24_11035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455421.1"
                     /translation="MRVRAWADPARPGSSQLTVETLYRPLLDPSLPDRELEREVAPDH
                     PVAIKVVATLKKLVDRFGGSPGPQTEPAPSGGRKPGQADAADQPDQSE"
     gene            complement(471..1265)
                     /locus_tag="VGQ24_11040"
     CDS             complement(471..1265)
                     /locus_tag="VGQ24_11040"
                     /inference="COORDINATES: protein motif:HMM:NF014078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF116 domain-containing protein"
                     /protein_id="HEV8455422.1"
                     /translation="MAESPRAHLIHIDVDRRLGHEWDEWDGRPLPNQGNYDSSPGLFF
                     AWSAASLAIGLGVIALGLYLLSPRLRTVHAGLPSLLWSGLLLGGSLLGVWWGVLLLSH
                     EIRRPLLPERLAERGPFLRLMRLTSRIAGRFGRRDWVENAAVKVYNGLAVMRGRKVGQ
                     GELLLLIPRCLSKVTLDGVLGIAGKYGVPVFVATRGQLARRVIRERRPRAVVAVACER
                     DMVSGLHDVAGKIPVLGLTMTLPAGPCKDASLDLGQLERWVQAYVV"
     gene            1294..>1727
                     /locus_tag="VGQ24_11045"
     CDS             1294..>1727
                     /locus_tag="VGQ24_11045"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEV8455423.1"
                     /translation="MLPPPAVRGIYRTDSRARAAYAEAAGIYRILPQAVCLPADIDDL
                     RHLIRWAAEHRTSLIPRGAGSAMGGGNVGEGIIVDLNHMAGRRLEVDVSARRAITSAS
                     VTLAELNAATGPHGLRLPPDPSSGRWASLGGMVSTNAAGARSV"
BASE COUNT          336 a          589 c          540 g          262 t
ORIGIN      
        1 aatgaaactc aatacgataa ataagaaaca cacaacattt cagacgagat cacttccgat
       61 aagattacac ctcgcaagat ccagcttcgg gacggctaca tcgagacagc ctggttcgag
      121 gcgggaaccg ggcgagtagc ccagggaaga cgcgccgttg gaccggggat cgtgcgagtt
      181 cgggcctggg ctgatccggc tcgaccgggt agctctcagc tcacggtcga gacgctctat
      241 cgcccgctgc tggatccttc tctacctgat cgggagttgg agcgtgaagt cgccccagac
      301 catccggtgg cgattaaagt cgtggctacg ctgaagaagc tggtggatcg ctttggtggc
      361 tcacccggac cccagacgga gccagccccc tctgggggca ggaagcccgg tcaggcggac
      421 gccgccgatc agccggacca atccgaatag tcttgcctac cgtccgcccg tcacaccacg
      481 taagcctgta cccaccgctc cagctgcccc aggtccaacg acgcgtcctt gcagggcccc
      541 gccggaagag tcatggtgag gccgagcacg gggatcttgc cggcaacgtc gtgcaggccg
      601 ctgaccatgt cccgctcgca ggccacggcc accacggccc gaggccggcg ctcccgaatc
      661 acccgacgcg ccaactgtcc ccgggtggcc acgaagacgg gcactccgta cttcccggcg
      721 atcccgagca caccgtcgag cgtcaccttg gacaggcagc gggggatcaa cagcagcagc
      781 tctccctgac cgactttgcg gccgcgcatc acggccagac cgttgtagac cttcaccgcc
      841 gcattctcga cccagtcccg gcggccgaac cgacccgcga tccgggacgt cagccgcata
      901 agcctgagga acggccctcg ctccgccagc cgctcgggga ggagaggccg ccggatctca
      961 tgggagagca gcagcactcc ccaccagact cccagaaggg atcctccaag cagcaagccg
     1021 ctccagagca acgagggcag gccggcgtgg actgttctca gacgggggga gaggagataa
     1081 aggccaagcg cgatgacacc aagaccgatg gcgaggctag cggctgacca ggcaaagaag
     1141 agaccggggg aggagtcgta attcccctga ttcggcagcg gacgtccatc ccactcgtcc
     1201 cattcgtggc cgagccggcg atcgacgtcg atatgaatca ggtgagctcg aggactctca
     1261 gccatagggg gagaagatag ttagcttttg acgatgctgc ctcctccggc cgtccggggc
     1321 atttaccgaa ccgactcgag ggcgcgcgcc gcctatgcgg aggccgctgg catctatcgt
     1381 atccttcctc aggcggtctg ccttcccgcc gacatcgacg atctccggca tctgatccgc
     1441 tgggccgccg agcaccgcac ctcattgata ccgcgcgggg caggcagcgc catgggcggc
     1501 ggcaacgtcg gtgaaggcat tatcgtggat ctcaaccaca tggcaggtcg ccggctcgag
     1561 gttgatgtct ccgcccggcg cgcgatcacc agcgcgagcg tgaccctcgc ggagctcaac
     1621 gccgccaccg gcccccatgg gctccgcctt ccgcccgacc cgtccagcgg gcgctgggcc
     1681 tctctcggcg gcatggtctc gaccaatgcg gccggggcaa gatcggt
//
LOCUS       DASYRV010000410         6408 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3690439, whole genome shotgun sequence.
ACCESSION   DASYRV010000410 DASYRV010000000
VERSION     DASYRV010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6408
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3690439"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..622
                     /locus_tag="VGQ24_11050"
     CDS             <1..622
                     /locus_tag="VGQ24_11050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455424.1"
                     /translation="MLISDARVLLIPVACGLLFWAAVAPEPRFGWGAAWIAFATVAAM
                     TLGTRPHSRATPRLLVVLPLVAAIGIPVAQILVTNPARALGRWSSMFLTFPAGNEIIS
                     RLPTPVTRPYRTSRGYLVNSPEDGRCWGGALPCTPWPADDLRLLDPGNPGGGFVQGSE
                     WRPVSDYPRPGSRFVEYVSCRARKEIAKQECIAAVAGDDGGPTQHR"
     gene            788..2269
                     /locus_tag="VGQ24_11055"
     CDS             788..2269
                     /locus_tag="VGQ24_11055"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HEV8455425.1"
                     /translation="MTESTAERRRLDGSLASSVGWTAVAKVITQLFAWVLTFLVARIL
                     SPSDFGLYGMASVFFWAVFAIGEFGLGSAIIKQRDLSERQIAQINGFMVLTGLASAAV
                     VAASAGPLAVFFHEPALHEIILAASVMFVIASFRNVPNALLQRELRFKRLAFNESLRA
                     GVMAVSVFGLALLGFGVWSLVLGNILATLVGTLDLLGAQPHRLEFPHAGTIRAATTFG
                     RDVVITRFSWYAMFNADFLVAGRTLGKAALGIYSFAWTLASLPVEKISLLVTRVSMPH
                     FSAVQHQPTELMRYLRLMTGGLAFITFPAAIGIGILAEDLVRIALGDQWLGVVLPLQI
                     LAVVAPLRAVGTLFPQLIPVLNQTRFGVIHGISALAFLVVAFWVGSHWGTTGIATAWV
                     VAYPLMIAPIALRVCQGIGLRFRDYLRWLAPPATGSVIMGGAVLAARAVLLGGLPLVP
                     RVIAEVAMGLAVYGLSAWILDRDRILGALAIVRRQRAGQPVAL"
     gene            complement(2239..3396)
                     /locus_tag="VGQ24_11060"
     CDS             complement(2239..3396)
                     /locus_tag="VGQ24_11060"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016145.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide pyruvyl transferase family
                     protein"
                     /protein_id="HEV8455426.1"
                     /translation="MATPTVALHGNHYDNNFGDLLLLKVFERWVAAAGDYRITYPWLP
                     DEEAERFSRHFPGRATGKVAGSWQALIYCGGGLFADTGRDGRWLRGHFAKRFAKEVAP
                     PARIARRKRLPYAIIGPGAGPITNLFTRREAARMFRGAARVSVRDEESRAFLLRELGV
                     PDGFVVAPDPATTASREDVPTAARDAIAARLASAGGSVLLGVHHPRDFVAPSAPSAIL
                     LRALLQVLRNNPDVTPVLFTDIGSDTTSAHCEKLAATIATETGRSSLTIPFPGVWETV
                     SLLHQLSAVLTTKLHIGIVSYAVGTYVEAFPYHPKVQQFYRVTDRASQCALLAEVTDS
                     IAVAKIQRAIVQGRARPELRDARWAETRRRAEEHGRVVAEFLHSATGCPAR"
     gene            3500..4735
                     /locus_tag="VGQ24_11065"
     CDS             3500..4735
                     /locus_tag="VGQ24_11065"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEV8455427.1"
                     /translation="MSGVKAILKSLAWVSVLPVFGVLLLLRLLFPRRPVVLPDSVERL
                     TLVAPYEPSGKSGGSTAIANLIETLERGYRVAVVPLWSLSPPSRWRAIIARYLLDSVP
                     IPTRCGPFLTSPGSVRSRLDSTDPVVIEFVSGSLFTYFGGAPPNHTILRDHEVLLRRV
                     LSEHAVPVRRWRVLQLPRIVATYLFTYRIYLGVDQVVALTPEDGADLIRFFPRLAGRV
                     RVIPVSFEVPSTLPAIPSPEPGHEILFLANFYHRPNVDGLLWFLREVAPQLRPGLTLH
                     LCGMDEPLDNLDLHSPNLRVIRHGFVPDVAATFHQVTVAVSPLISGGGVRMKNLFLAG
                     QRKAIVTTPLGNQGIDFESGRSAEVCATGTEMARAIERLLDDPRSATEIANAGYEHVK
                     RQFTAAAVLDRYRKLVFAS"
     gene            4741..5886
                     /locus_tag="VGQ24_11070"
     CDS             4741..5886
                     /locus_tag="VGQ24_11070"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEV8455428.1"
                     /translation="MEKRLGFVMNFPPATGYAWDTIEAVFGEVARLLRPRGYEVSAAF
                     PSGDVRLARTLLDAGIDVQLVDYDPTRSGSTGLANLVRWIQSRRIAILYLTDQPTYHR
                     RYLRLRLAGVRRIIVHDRTSGIRRPRPGVAALVKRVANRLPLISADRFLGVSKFVTDR
                     LRRVNGTPASRTQTVYNGIDLSRFDNLESGVLRRELGLDSATPIIFASGRAMPYKGIP
                     VLLRAVRRLCDDGWQNLHLVYAGNGPALASFRTEATDLGLAKVHFLGKRTDVPALLAD
                     ATIAVIPSVWAEAFGLTVVEAMAAGVPLVATRIGGIPELVEPGVTGLLVEPNDAAGLA
                     AAIGRLLGDAELRENLAAKARVWARERFSLTRVGSDLASAIETTIGR"
     gene            5876..>6408
                     /locus_tag="VGQ24_11075"
     CDS             5876..>6408
                     /locus_tag="VGQ24_11075"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8455429.1"
                     /translation="MAVDSGPRGRREAGLLTDPISVVQVLAPAPAGGLERVVRTLAGG
                     LSRRGHRVTVLTVITPDQAGHPYVEALRSDGIEVVPVILASRRYLAERRAVAQELAAR
                     HAAILHTHGYRPDLVDSGVARRRQVATVSTVHGFTGGDWKNRFFERLQLRNLRTMSAV
                     VAVSAPLGERLGRAGVRP"
BASE COUNT         1005 a         2031 c         2119 g         1253 t
ORIGIN      
        1 aatgctgatc agtgacgcgc gcgtactcct catcccggtg gcttgtggtt tgctgttctg
       61 ggcggcggtc gcgccggagc cgcgattcgg ctggggcgca gcctggatcg cgtttgcaac
      121 cgtggcagca atgacgttag ggacccggcc ccattcacgc gctacgccca ggctgctggt
      181 cgtgctccct ctcgtggcgg cgatcggcat tccggtcgcc cagatcctgg tgaccaaccc
      241 agccagagcg ctgggtcggt ggagttccat gttcctcacg tttcccgcgg gcaatgagat
      301 catctctcgc ctgccgacac cggtgacccg gccctaccgc accagccgcg gttatctggt
      361 caactcgccg gaagacggcc gctgctgggg cggggcactt ccctgtacgc cgtggccggc
      421 cgacgatctg cggctgctcg atcccggcaa tccgggaggc gggttcgttc agggaagcga
      481 gtggcgcccg gtcagcgact acccccgccc cggcagccga ttcgtcgagt acgtcagctg
      541 ccgagccagg aaggagatcg ccaagcaaga atgcatcgcg gcggtggctg gcgacgacgg
      601 ggggcccact cagcatcgct gagccgagga agacggggcg ttccgaacct cattggcgtg
      661 aaacttgctc gggtatatcg ttgcgggcac tatagttacg ccacgccaac tggattgacg
      721 ccaggtcgaa acctggcgcc atcgccacac tgcatcccca gtacaacgag gaatctcggg
      781 cagaccggtg actgaatcga ccgcggagcg acggcgtctc gacgggtcgt tggcgagcag
      841 cgtggggtgg accgcggtcg ccaaggtcat cacccagctc ttcgcctggg tcctcacgtt
      901 cctggtcgcc cggattctgt ctccgagcga cttcggtctg tacggaatgg cctcggtctt
      961 cttctgggca gtcttcgcca tcggcgaatt cgggctcggt tcggcgatca tcaagcaacg
     1021 tgacctgtcc gagcgccaga tcgcccagat caacggcttc atggtgctca cggggctggc
     1081 cagtgccgct gtggttgccg cgtcggccgg gccgctggcg gtgttttttc atgagcccgc
     1141 gttgcacgag atcatcctcg ccgccagcgt aatgttcgtg atcgcgagct tccgcaacgt
     1201 acccaacgcc ttgctgcaac gggagcttcg attcaagcga ctggccttca acgagtcgct
     1261 ccgggcggga gtgatggccg tgagcgtctt cgggttggcg ctccttggct tcggggtctg
     1321 gagcctggtc ctgggcaaca tcctggcaac gctggtcgga accttggacc tgctcggcgc
     1381 gcaaccgcat cggctcgagt tccctcacgc cgggacgatt cgggccgcga cgacgtttgg
     1441 tcgcgatgtc gtcatcacca ggttttcctg gtacgccatg ttcaacgctg attttctcgt
     1501 cgcgggccgg acgctcggga aagcggcact gggtatctac tctttcgcct ggacgctggc
     1561 gagcttgccg gtggagaaga tctcgctcct ggtcacccgc gtatcgatgc cccacttctc
     1621 cgcggtgcag catcagccga ccgagctgat gcgctacctc cggctgatga cgggcggcct
     1681 cgcattcatc acctttcccg cggccatcgg catcggcatc ctggcggagg acctggtccg
     1741 gattgctctc ggcgaccaat ggctgggcgt ggtactgccg ctccagattc tggcagtagt
     1801 agctccgctg cgagccgtgg gcacactttt ccctcagctc atcccggtgc tcaatcagac
     1861 caggttcggg gttattcacg gaatcagtgc gctggcgttt ctggtggtgg ccttctgggt
     1921 cggcagccac tggggaacca ccgggatcgc gacggcctgg gtggttgcct atccgctgat
     1981 gatcgccccg atcgccctgc gagtgtgtca ggggatcggg cttcggtttc gcgactacct
     2041 gcggtggctg gcgccgcccg caacgggatc ggtgatcatg ggaggagcgg tgcttgccgc
     2101 acgcgccgta ctcttggggg ggctgccttt ggtcccgcgg gtcatagccg aggtggcgat
     2161 ggggcttgcg gtgtacgggc tctctgcctg gatcctcgat cgcgaccgga ttctcggcgc
     2221 actagcgatc gtccgacgtc agcgggcagg gcagccggtc gcgctgtgaa gaaactccgc
     2281 gacgacccga ccgtgttctt ccgcccgccg gcgggtctct gcccaccgcg catccctgag
     2341 ctccggtcgc gccctaccct gtactatggc gcgttggatc ttggcgaccg cgatcgaatc
     2401 agtgacctcg gcgagtaagg cgcactgcga tgcgcgatca gtcacccggt agaactgctg
     2461 gaccttcggg tgatacggga aggcctcgac atacgtccca acggcgtagg atacgattcc
     2521 gatatgcagc ttggtggtga gcacggccga gagctggtgg aggagtgaga cggtctccca
     2581 cacgccaggg aagggaatcg tcaggctcga ccggccagtc tcggtggcga tggtggcggc
     2641 taacttctcg cagtgggccg aggtagtgtc gctgccgatg tcggtgaaca ggaccggggt
     2701 cacgtcgggg ttgttgcgga gcacttgcag gagagctcgc aagaggatgg ctgaaggtgc
     2761 tgagggcgcc acaaagtcgc gggggtggtg aacgccgagc aggacgcttc caccggcgct
     2821 cgccaggcgg gcggcgatcg cgtcacgcgc cgctgtcggg acgtcctccc ggcttgccgt
     2881 cgtcgcggga tcgggggcga cgacaaagcc atcgggcaca ccgagctcgc ggagcaggaa
     2941 cgcgcgggat tcttcatccc gaaccgagac tctggccgcg ccgcgaaaca ttcgagcggc
     3001 ctcgcgccgg gtgaacagat tggtgatcgg acccgctccc gggccaatga tcgcgtaggg
     3061 aagtctctta cgccgcgcga tcctggcggg tggggccact tccttcgcaa agcgcttggc
     3121 aaagtggcca cgcagccagc gtccgtcgcg cccggtgtcg gcgaagagac caccgccgca
     3181 gtagatcagg gcctgccagc ttcccgccac tttccccgtt gctctgccgg gaaaatgccg
     3241 actgaaccgt tcggcctctt catccggaag ccacgggtaa gtgatccggt agtcgccggc
     3301 ggcggcgacc caacgttcga agaccttgag gagcagtagg tcaccgaagt tgttatcgta
     3361 atggtttccg tgcagcgcaa ccgtcggcgt cgccattcga agtgtgcttc tcgctagtta
     3421 ggaccgcaga ctcgagcccg ggccacaagc ccgagcgcga aggctaacac cgtttcgtcc
     3481 agcaaggagc attctttcga tgtccggcgt caaggccatc ttgaaatccc tggcgtgggt
     3541 ctcggtactg ccggttttcg gggtactgct gctcctgcgc ctgctcttcc cgcgacgtcc
     3601 ggtggtgctt cccgactcgg tcgaacgcct taccttggtc gcaccgtacg agcccagcgg
     3661 gaagagcggc ggcagtaccg cgatcgccaa cttgattgaa accctcgagc ggggctaccg
     3721 ggtcgccgtg gtgccactct ggtcgctttc cccgccgagc cggtggcgag cgatcatcgc
     3781 acgttatttg ttggactccg tgccgatccc aacgcgctgt gggccgttcc taacctctcc
     3841 ggggagcgtc cggtcgcggc tggattcgac ggatccggtc gtgatcgagt ttgtctcagg
     3901 aagcctgttc acctacttcg gtggagctcc ccccaaccat accattctgc gcgatcatga
     3961 agtcttgctt cggcgggtat tgtcggagca cgccgtgccg gtgcggcgct ggagagtact
     4021 ccaacttccg cggattgtgg ccacctatct cttcacctat cggatctacc tcggggtaga
     4081 ccaggtggtg gcgcttacgc cggaggatgg cgctgatttg attcgattct ttccccggct
     4141 cgccgggcgg gttcgggtca ttccggtgtc gttcgaggtg ccgagcaccc tcccggccat
     4201 tccgtcgcca gagccgggtc acgagatcct gtttctggca aatttctacc accgccccaa
     4261 tgtggacggc ttgctctggt ttctgcgtga ggtggcgccc cagcttcgtc cggggctcac
     4321 gctgcacctt tgcgggatgg atgaaccatt ggacaaccta gacctccatt ctccgaacct
     4381 tcgggtcatc cgacacggat tcgtgccgga cgtcgccgcc acctttcatc aggtcacggt
     4441 ggcggtttcg ccgctgatct cgggtggcgg ggtccggatg aagaacctct tcctggccgg
     4501 tcagcgaaaa gcgatcgtga cgactccgct gggaaaccag ggtatcgatt tcgagtccgg
     4561 ccgaagtgcg gaagtctgtg ccactggaac ggaaatggcc cgagccatcg agaggttgct
     4621 ggatgacccc cgttccgcga ccgaaatcgc caacgccgga tacgagcacg tgaagcggca
     4681 attcacggcg gccgccgtcc tggatcgcta tcggaaactg gtgttcgcct cgtgaaagag
     4741 gtggagaaac gcctcgggtt cgtgatgaat tttccgcccg cgacggggta tgcctgggac
     4801 acgatcgaag cggtgtttgg ggaggtcgcg cggctgctgc gcccgcgcgg atacgaggtc
     4861 tcggctgcct ttcccagtgg agatgttcgc ctggctcgga cgctgctcga tgcgggtatc
     4921 gatgtccagc tcgtcgacta cgaccccaca cgatccggtt caaccgggct cgcaaacctg
     4981 gtccgctgga tccaatcgcg gcgaatcgcg attctttacc tcaccgatca gcccacctac
     5041 catcggcgct acctgagact gcgcctggcc ggtgtccgcc gaatcatcgt gcacgatcga
     5101 acctccggga ttcggaggcc ccggccgggt gttgccgcac tcgtcaaacg agtggcgaac
     5161 cggctccccc tgatcagcgc cgatcgcttt ctcggggttt cgaaattcgt gaccgaccga
     5221 ctccggcgcg tcaacgggac tccagcctcc cggacccaaa ccgtttacaa tgggatcgat
     5281 ctgtcgcggt tcgacaacct cgagtctgga gtgcttcgcc gagagctcgg cctcgactcg
     5341 gcaacgccga tcattttcgc atcgggccga gcgatgccgt acaaagggat tccagtattg
     5401 cttcgcgcag ttcggcggct ctgcgacgac ggctggcaga acctccacct tgtctacgcg
     5461 ggaaacggcc cggccctcgc cagttttcgc accgaggcaa ccgacctcgg cttggccaag
     5521 gttcacttcc tcggtaaacg taccgacgtt cccgcgctcc tggccgatgc gacgattgcc
     5581 gtgattccat cggtgtgggc cgaggccttc gggctcaccg tggtggaggc gatggccgca
     5641 ggagttccct tggtcgctac ccgaatcggc gggattcctg agctggtcga acctggcgtc
     5701 actggtctac tggtcgagcc aaacgacgcc gccgggttgg cggcggcgat cgggcggttg
     5761 ctcggggacg ccgagctccg cgagaacctg gcagccaagg cgcgggtgtg ggcccgggag
     5821 cggttctcct tgaccagggt gggttccgac ctggcgagcg cgattgagac gaccattggc
     5881 cgttgactcg ggaccccgtg gccggaggga agccgggttg ctcaccgacc cgatctctgt
     5941 tgtccaggta ctggcacccg ccccggccgg agggctcgag cgggtggtgc ggactctggc
     6001 cggcgggctg agccggcgcg gccatcgagt tacggtgctc acggtgatca cgccggatca
     6061 agctggtcac ccctacgtcg aggccttacg ctcggatggc atcgaagtgg tgccggtgat
     6121 cctggcatcc cgaaggtacc tcgctgagcg gcgggccgtg gcccaggagc tcgcggctcg
     6181 gcacgcagcg atcctccaca cccatggcta ccgcccggat ctggtggatt caggagtagc
     6241 gcgccggcgg caggttgcta ccgtcagcac ggtgcatggc ttcaccgggg gcgactggaa
     6301 gaaccggttc tttgagcgat tgcagctgcg caaccttcgc acaatgagtg cggtcgtggc
     6361 ggtttcggcg cccctgggtg agcgactagg ccgagcggga gtgcggcc
//
LOCUS       DASYRV010000411         3056 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_580325, whole genome shotgun sequence.
ACCESSION   DASYRV010000411 DASYRV010000000
VERSION     DASYRV010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3056
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_580325"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1761
                     /gene="mutS"
                     /locus_tag="VGQ24_11080"
     CDS             <1..1761
                     /gene="mutS"
                     /locus_tag="VGQ24_11080"
                     /inference="COORDINATES: protein motif:HMM:TIGR01070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEV8455430.1"
                     /translation="CTLLESIDATVTPMGGRLLRQWLLSPLRDPDAINARLDAVEVIV
                     HDARGRGRLREGLDGVRDLERLAGRAAAGRATPRELGSLRDSFQRLPDVAGALAALAG
                     SALTDGGHSGALAEAADELDLLADLSSQLSAALADRLPATLADGGVIRSGYDSELDEL
                     RSLRDGGRQYIASLQQRERERSGIPSLKVGFNKVFGYYLEVTHTHANRVPANYERRQT
                     LATAERYVTPELKDYEARVLGAEERIGTREAELFGAVRAAIGQAIGRIQQTARVLAGL
                     DVWAGLAERAVTGRYVRPQVTDAFALTLRESRHPVLERMMARESFIPNDARFTEAERV
                     ALVTGPNMAGKSTILRQIGLCVVLAQMGSFVPAAEASIGAVDRLFTRVGASDNLAQGQ
                     STFMVEMSETSAILHNATSRSLVLLDEIGRGTSTYDGVAIAWAVTEHLHDRVGCKTMF
                     ATHYHELMQLPERLQHARNYNVAVREAGDTVVFLHRLEPGGTDRSYGIHVGQLAGLPS
                     QVVARARDILATLEGEHRMVPGPPPSVSRDPGQLPLFGDPPEPDPMVEELKSLDVDTL
                     TPLEALNRLADFKRRAGERK"
     gene            1758..2186
                     /locus_tag="VGQ24_11085"
     CDS             1758..2186
                     /locus_tag="VGQ24_11085"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEV8455431.1"
                     /translation="MTAADILWTTVPVLALALMACERKDDGTMRLIDHDTPPPASPAE
                     DPPVAINPVSPVRYPPALLQQGIEGSVLLRLYVDSAGVVIPDSTRIAESSGYPALDSA
                     ALAGAPQLRFSPALLQGRPVAAPFLQPVQFRSPRSRSTTE"
     gene            2183..>3056
                     /locus_tag="VGQ24_11090"
     CDS             2183..>3056
                     /locus_tag="VGQ24_11090"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase family protein"
                     /protein_id="HEV8455432.1"
                     /translation="MSSPQHLEPYESVLETIGWTPLIRLARLGSGVRTPVYGKAEYVN
                     PGGSVKDRIGLAIIEDAERRGDLRPGGTIVEGTSGNTGVGLAIAAALKGYRCVFTMPD
                     KMSQEKVRLLKAFGAEVVITPTAVPPDHPDNYVMKAKQIARETPGAILADQFYNEINP
                     ESHYATTGPEIWEQTKGRVTHLVAGAGTGGTVSGAGKYLKERNPGIKVVAGDPIGSLY
                     THYHRTHNLGDGHPYKVEGIGGDKIPTSLHFDLIDEWIFVTDKDAMQMARRLAKEEGL
                     FVGGSTGVNVVAALD"
BASE COUNT          525 a          995 c         1036 g          500 t
ORIGIN      
        1 tgcaccctgc tcgagtcgat cgacgcgacg gtgaccccca tgggtgggcg tcttctgcgt
       61 cagtggctgc tctccccact tcgtgatccg gacgcgatca atgcgcgcct cgatgcggtc
      121 gaggtgatag tacacgacgc gcggggtcgg ggccggctgc gggaggggct cgatggcgtg
      181 cgtgacctcg agcggctggc cggccgagcc gccgcgggcc gcgccactcc ccgggagctg
      241 gggtcgcttc gcgattcgtt tcagcggctc cccgacgttg ccggagcgct cgcggcgctc
      301 gccggctccg cgcttacgga cggcggccac agtggcgcgc tggccgaggc cgccgacgag
      361 ctggacctcc tcgccgatct gagctcccag ctttcggcgg cgctcgccga ccggcttccg
      421 gccacccttg ccgatggtgg ggtcatccgt tccggctacg actcggagct cgacgagctg
      481 agatcgctcc gcgatggagg gcgccagtac atcgcgtcgc tgcaacagcg ggagcgggaa
      541 cgaagtggca tcccctcgct caaggtcgga ttcaacaagg tcttcggcta ttacctggag
      601 gtaacccaca cccacgcgaa tcgggtccct gcgaactatg agcggcgtca gaccctcgcc
      661 accgccgaac gctatgtcac tcccgaactc aaggactatg aggcccgggt gctcggcgcg
      721 gaggagcgga tcggcacccg ggaggcggaa ctgttcggtg cggttcgcgc agcgatcggg
      781 caggccatcg ggcggattca gcaaactgcc cgggttctcg cagggctcga tgtctgggcg
      841 gggctggccg agcgggccgt gacgggccgt tatgtccggc cccaggtgac ggacgcattc
      901 gcactgaccc ttcgggagag ccggcatccg gtgctcgagc ggatgatggc ccgggagtcg
      961 ttcattccca atgatgcccg gttcaccgag gcggagcggg tcgccctggt gactggcccg
     1021 aatatggcgg ggaaatccac catacttcgg caaattggac tctgcgtggt tctcgcccag
     1081 atgggatcgt tcgtgccggc ggccgaggcg tcgatcggcg cggtggaccg gctcttcacc
     1141 cgggttggag cgagcgacaa cctcgcgcag gggcagtcca ccttcatggt ggagatgagc
     1201 gaaacgagcg ccattctgca taacgcgact tcgaggagcc tcgtactcct cgatgagatc
     1261 ggccgcggca cctcgaccta cgatggcgtg gcgatcgcct gggcagtgac ggagcacctg
     1321 cacgatcgag tcgggtgcaa gaccatgttc gccacccact atcacgagct catgcaactg
     1381 cccgagcgtc tccagcacgc gcggaactac aacgtggcgg ttcgggaagc gggggacacg
     1441 gtcgtcttcc tccatcggct cgagcccggg ggcaccgatc ggtcttacgg catccatgtc
     1501 ggccagctgg ccggtcttcc gagccaggtg gttgcccgag cgcgggacat actggccaca
     1561 ctcgagggcg agcatcgtat ggtgccgggg ccacccccca gcgtgtcgcg cgacccgggc
     1621 cagctgccgc ttttcggtga tccccccgag cccgatccga tggtggagga gctcaagtcg
     1681 ctcgacgtgg atacactcac cccgttggag gcgttgaacc gattagccga cttcaagcgc
     1741 cgagcgggtg aacggaaatg acagcggctg acatactctg gacaacagtc ccggtgctgg
     1801 cgctcgccct catggcctgc gaacgcaagg atgatgggac aatgaggttg atcgaccacg
     1861 acactccgcc gccggcaagt cccgctgagg atccaccggt ggccatcaac ccggtatccc
     1921 cggtgcgcta tccgcccgcc ctgctgcagc agggcatcga gggcagcgta ctgctccggc
     1981 tttacgtcga ttcggccggc gtggtgatcc cggactcgac gcgaatcgcc gaatccagcg
     2041 gctacccggc gctggactcc gcggccctgg ccggtgcccc gcagctccga ttttcgcccg
     2101 cactgctcca ggggcgcccc gtggcggctc cctttctgca gccggtgcag ttccgcagcc
     2161 cccgctcgcg gagcaccacg gaatgagctc cccccaacac ctcgagccgt acgagtcggt
     2221 cctggagacg atcggctgga ccccgctcat ccggctggcc aggctggggt cgggcgtgcg
     2281 cacgccggtc tacggcaagg ctgaatacgt gaaccccggc ggttcagtga aggaccggat
     2341 cgggctcgcg attatcgagg acgcggagcg gcggggcgat ctccggcccg gcggcaccat
     2401 cgtggaaggg accagcggta acaccggtgt cggactggcc atcgcggcgg cgctcaaagg
     2461 atatcgctgc gtcttcacca tgccggacaa gatgtcgcag gagaaggtcc gcttgctgaa
     2521 ggcattcggg gcggaggtcg tgatcactcc gaccgcggtc ccgccggatc acccggacaa
     2581 ctacgtgatg aaggccaagc agatcgcgag ggagaccccg ggagccattc tggccgatca
     2641 gttctataac gagatcaatc ccgagtccca ttacgcgacg actggacccg agatctggga
     2701 gcagaccaag ggacgggtca ctcatctcgt agctggggcc ggtaccggtg ggaccgtcag
     2761 cggggccggc aagtatctga aggaaagaaa cccgggaatc aaggtggtgg cgggtgaccc
     2821 catcgggtca ttgtacaccc actaccatcg cactcataac ctgggtgacg gccaccccta
     2881 caaggtagag ggaatcgggg gagacaagat cccgacctcg ctgcacttcg acctgatcga
     2941 cgagtggatc ttcgtcaccg acaaagacgc gatgcagatg gcacggcgcc tcgccaagga
     3001 agagggattg ttcgtgggtg gctccaccgg cgtcaacgtg gttgcggcgc tcgatg
//
LOCUS       DASYRV010000412         5303 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_4106601, whole genome shotgun sequence.
ACCESSION   DASYRV010000412 DASYRV010000000
VERSION     DASYRV010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5303
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4106601"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..794
                     /locus_tag="VGQ24_11095"
     CDS             <1..794
                     /locus_tag="VGQ24_11095"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: protein motif:HMM:NF012796.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEV8455433.1"
                     /translation="GLSMDDAHIFCTPDQIEDEIFLCLSQVDRLVRETFGFELDFELS
                     TRPSERLGDDAIWDRAEATLKRALERKGIPYSVEEGGGAFYGPKIDIKFRDAIGRLWQ
                     GPTIQLDFNLPERFQLEYTGPDNKPHQPVMIHRAIYGTLERFIGNLIEHFAGAFPVWL
                     APEQVRVIPISDAQAAAAHQLAGRLKAAGLRAHVDARSETLNYRIREGEVQKVPYMAV
                     VGQREAESDSLALRVRGAGKKQEVMTVEAFLGRIGEEVRTRAMLP"
     gene            872..2062
                     /locus_tag="VGQ24_11100"
     CDS             872..2062
                     /locus_tag="VGQ24_11100"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HEV8455434.1"
                     /translation="MSDSTTPVIVSAVRTPIGRYLGGLSSFTAPQLGAMVIRDAVSRA
                     GVDASDVEEVIMGQVVQGGSGQAPARQALIHAGLPASIPALTINKVCGSGLKAVMLAS
                     QAIKAGDAECIVAGGQEAMSNAPHYVYGMRGGIKAGNQTMVDGMIHDGLWDSFGCCHM
                     GEYAEYTAEKAGVSRADQDAFAYDSHQKAVAAADAGKFKAEILPVQIPGKGGPTTVSA
                     DESPRRDTTAETLAKLKPAFRKDGGTVTAGNAPGLNDGASALVVTSLAFARAHGLKPL
                     ARVTGYSTGGGEPREIFFAPVLAVRALMDKAGTRIGDYDLIEANEAFAVQALADGREL
                     GWDWDRVNVHGGAVALGHPIGASGARVLTTLLYALRDRGGSTGLATLCLGGGNAVALS
                     VELI"
     gene            2062..2649
                     /locus_tag="VGQ24_11105"
     CDS             2062..2649
                     /locus_tag="VGQ24_11105"
                     /inference="COORDINATES: protein motif:HMM:NF014669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HEV8455435.1"
                     /translation="MHPDAGPTAVGSRRASTIQTQVLRRAVAAGLGVLVVALSAQVVV
                     PVPFSPVPMTLQPLAVLAVGGLLGPAGAVGALLLYIGLGALGLPVFAGGGSGVLHLVG
                     PTGGYLLAFPVAAGVTGTLSGRIPRSPLRVLLACALGMVIIHAGGVAQLALLGGDPAL
                     AMRVGFVPFLTGDLLKVGLAAALILAAGPRVRSLL"
     gene            2682..3530
                     /locus_tag="VGQ24_11110"
     CDS             2682..3530
                     /locus_tag="VGQ24_11110"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II CAAX endopeptidase family protein"
                     /protein_id="HEV8455436.1"
                     /translation="MRRAVLGSLGFVVLGFILFGLTVAPFASSFVGHGTVEELARRPT
                     ISLSLLQGLGLLVAFGLATWIIGIKVLRLDLRDLRWRTRLGWARGLGAGLVLGVLPAA
                     VAMLLGVIAGGAAWIPDEGSLSEYLSRIGIILLVLAPAALAEEVIFRGVPLVLFSRVF
                     GRPAALVLLSFAFALAHVSNPDVTARALGNITLAGILLSLAFYSPGGMWAAFGAHLGW
                     NMTLAALGAPVSGLPFEIPFVDYSMGGPAWLTGGAFGPEGGLLSTVAITSAIILAVRW
                     VRKDPT"
     gene            3527..4381
                     /locus_tag="VGQ24_11115"
     CDS             3527..4381
                     /locus_tag="VGQ24_11115"
                     /EC_number="1.1.1.157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HEV8455437.1"
                     /translation="MKRAAVVGAGTMGNGIAHVFAQHGWQVSLIDSAAPALEKATATI
                     RGNLERQVKKGTLPADAPAEVLGRIVTGTSLDAAAKAEIVVEAASENPALKFSVFEQL
                     DRICGSGVILATNTSSISITEIAAHTRRAEQVIGMHFMNPVPIMPLVEVIRGHATSDA
                     TTTAVMDTARALGKSPVEVNDYPGFVSNRVLMPMINEAIFCVMEGVATADSVDTVMKL
                     GMAHPMGPLALADFIGLDVCLAILEVLHHGLGDDKYRPCPLLRKMVAAGHLGRKTGRG
                     FYDYDEKR"
     gene            4368..>5303
                     /locus_tag="VGQ24_11120"
     CDS             4368..>5303
                     /locus_tag="VGQ24_11120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase dimerization
                     domain-containing protein"
                     /protein_id="HEV8455438.1"
                     /translation="MKNVSGQRSAVSGAASTGHQGDPAHRSPLTAHDIDVFHQMETMG
                     HEQVLLSHDPSCGYFGIIAIHDTTLGPALGGTRFWQYATTDEAITDALRLARGMTYKS
                     AVAGINLGGGKSVIIGDNKRADREALFRAHGRFIETLGGRYITAEDIGTSPADMEYIK
                     LETDHVAGLLGLSGDPSPVTAYGVYVGMKAAAKFRWGSDNLSGKTVAVQGAGKVAYHL
                     MHYLHAEGSKLIVTDIDDEKVRRAVQEFGARPVPPGAIYDQEADIFSPNALGAIVNDE
                     TLPRLKVEIIAGGANNQLAEDRHGDELERRGILYAP"
BASE COUNT          845 a         1679 c         1802 g          977 t
ORIGIN      
        1 gggggctctc gatggacgat gcccacatct tctgcacacc agaccagatc gaagacgaaa
       61 tctttctttg cctgagtcag gtcgaccggt tggtgcggga gacattcggg ttcgagctcg
      121 acttcgagct atcgacccgg ccgtccgagc gcctgggaga cgatgcgatc tgggatcgcg
      181 ccgaagccac gctcaagcga gcgctcgagc gcaagggaat cccctatagt gtggaggagg
      241 ggggtggggc attctacggt ccgaagatcg acatcaagtt ccgggacgcg attggacggc
      301 tgtggcaggg gccgactatt cagttggact tcaacctgcc ggaacggttt cagctcgagt
      361 acaccggccc cgacaacaaa ccccatcagc ccgtgatgat ccaccgggcc atctacggga
      421 ccctcgagcg gttcatcggg aacctgatcg agcatttcgc gggcgcattc ccggtgtggc
      481 tcgctccgga gcaggtgcgg gttattccca tctccgatgc ccaggccgct gctgctcacc
      541 agctcgccgg gcggctcaag gcggccgggc ttcgggcaca cgtggacgcc cgaagtgaga
      601 ccctcaacta tcggattcgc gaaggcgagg tgcagaaggt cccctacatg gctgtcgttg
      661 gccagcgtga ggccgagtcc gacagcctgg cgcttcgggt gcgcggggcg gggaagaagc
      721 aggaagtgat gacggtggag gcgtttctgg gccggattgg ggaggaggtc cggacccgcg
      781 ctatgttgcc ttagacaatc atttcaaggt gacaaacgcc cgctttcagc gtaatttccc
      841 gcccagcgaa cccaaaccgg atcagtacct cgtgagtgat agcaccacac cagtcatcgt
      901 ctccgctgtc cgcaccccga ttggccgcta tcttggcggt ctctcctcgt tcaccgctcc
      961 ccagcttggc gccatggtca tccgcgacgc ggtctcccgt gccggggtgg acgcatccga
     1021 cgtggaagag gtgatcatgg ggcaagtggt ccaaggtgga tcgggccagg ccccggccag
     1081 gcaggcgctc atccatgccg ggcttccagc ctcaatccct gcgctcacca tcaacaaggt
     1141 gtgcggatcg gggctcaagg ccgtgatgct cgcgtcccaa gcgatcaagg cgggcgacgc
     1201 ggagtgtatc gtcgccgggg gccaggaggc gatgtccaac gctccgcact acgtctatgg
     1261 tatgcggggt gggatcaagg ccggcaacca gaccatggtg gacggcatga ttcacgatgg
     1321 cctgtgggac tcgttcggct gctgtcatat gggggagtat gccgagtaca ccgccgaaaa
     1381 ggccggcgtg agccgggccg accaggacgc gttcgcgtac gacagccatc agaaggccgt
     1441 tgccgcggcc gatgcgggga agttcaaggc cgagatcctg ccggtacaga tacccgggaa
     1501 gggcggtccg acgacagtgt ccgccgacga gtcacctcgg cgggatacca ctgcggaaac
     1561 gctggccaag ctgaagcccg cgttccggaa ggacggtggg acggttactg ccggcaacgc
     1621 gcccgggttg aacgacggcg cgagtgcgct ggtcgtcacc tcactggcct ttgcccgcgc
     1681 gcacggactc aagccgctgg cccgcgtcac cgggtatagc accgggggcg gtgagccgcg
     1741 cgagatcttc ttcgctccgg tcctggccgt gcgggcgctc atggacaagg ccggcaccag
     1801 gatcggcgac tacgatctga tcgaggccaa cgaggcgttc gcggtgcagg ctctggccga
     1861 tggccgcgag ctgggttggg actgggatcg ggtaaacgta cacggcggcg cggtggcgct
     1921 ggggcatccg atcggcgcga gcggtgccag ggtgctcacg acgctgctgt atgcgctgcg
     1981 ggatcgtggc ggcagcaccg gcctggccac cctttgcctc ggcggcggca acgcggttgc
     2041 cctcagcgtg gagcttatct gatgcatcct gatgccggcc ccaccgctgt aggctcgagg
     2101 cgcgcctcga ccatacaaac ccaggtcctt cgccgcgcgg tggcagccgg ccttggcgtg
     2161 ctcgtggttg ctctctccgc ccaagtggtg gtgccagtgc cattcagccc ggtcccgatg
     2221 accctccagc ccctggcggt gctggcagtc gggggactcc tcggtcctgc cggcgctgtc
     2281 ggcgctctcc tcctctatat cgggctcggc gctctcggtc ttccggtgtt tgccggcggt
     2341 ggctccggcg tcctgcacct cgttggcccg accggcggct atctcctcgc gtttccggtc
     2401 gccgcaggcg tgactggtac gctgtccggg cggataccac gatctccgct tcgtgtgctc
     2461 ctggcctgcg ctctgggcat ggtgatcatt cacgccgggg gtgtggccca actcgcgctg
     2521 ctgggtggcg atcccgcgct cgcgatgcgg gtcggcttcg tgccctttct caccggcgat
     2581 ctgctcaagg tcggcctcgc cgctgccctg atcctggcgg ccggtcccag ggtgcgctca
     2641 ctgctttgac cgacgcgcct gcgccgtccg ggcggctctc agtgcgccgc gcggtcctcg
     2701 gcagcctggg tttcgtcgtc ctcggtttca ttctcttcgg tctcaccgtt gcgccgtttg
     2761 cctccagctt tgtcggacat ggaacggtcg aggagctggc gcggcggccc acgatctccc
     2821 tgtcgctgct ccagggcttg gggcttctcg tcgcgttcgg cctcgccacc tggataatcg
     2881 gcatcaaagt actgcggctc gatcttcgcg atctgcgctg gcgcacgcgc cttggctggg
     2941 ctcgcgggtt gggcgccggg ctcgtgctcg gagtacttcc tgccgcggtg gcgatgctgc
     3001 tgggcgtcat cgccggtgga gcagcctgga ttccggatga agggtcgtta tccgagtacc
     3061 tgagccggat cggtatcatt ctgttggtgc tcgcgccggc agctctggcc gaggaggtca
     3121 ttttccgtgg ggtgccgctg gtgctgttct cgcgtgtgtt cggccgaccg gcggcgctcg
     3181 ttctcctctc cttcgctttt gcgctggccc atgtcagcaa ccccgacgtg acggcccggg
     3241 cgctggggaa catcacgctc gccgggatcc tcctttcgct cgcgttctac agtccgggcg
     3301 gaatgtgggc ggcgttcggc gctcacctcg gatggaacat gacgctcgcc gcgctcggcg
     3361 cgccggtcag tgggctcccc ttcgagatcc cgttcgtgga ttacagcatg ggcggtccgg
     3421 cgtggctcac cggaggcgcg ttcgggccgg aaggcgggtt gctcagcact gtggcgatca
     3481 ccagcgccat catattggcc gttcggtggg tccggaagga tcccacatga agcgggcggc
     3541 ggtggtcggt gcgggcacga tgggcaacgg catcgcccac gtgttcgcgc agcacggctg
     3601 gcaggtgtcc ctgatcgact cggccgctcc tgcactggaa aaggcaacgg caacgatacg
     3661 aggtaacctc gagcgccagg tcaagaaagg cacccttccc gccgatgcac cggccgaggt
     3721 gcttgggcgc atcgtgaccg gcacgtcgct cgacgcggcc gcaaaggcgg agatcgtggt
     3781 cgaggcggcg agcgaaaatc ctgccctaaa gttctccgta ttcgagcagc tggatcgaat
     3841 ctgcggttcc ggcgtcattc tggcgacgaa caccagctcc atctcgatca ccgagatcgc
     3901 tgcccacacc cggcgggccg agcaggtgat cgggatgcac tttatgaacc cggttccgat
     3961 catgccgctg gtcgaggtca tccggggtca tgcgaccagc gacgccacta ctaccgcggt
     4021 gatggatacc gctcgggcgc tgggcaagtc gccggtcgag gtgaacgact accctggctt
     4081 cgtgtccaac cgggtcctga tgccgatgat caacgaggcc atcttctgcg tcatggaggg
     4141 cgtcgcgacg gccgactctg ttgatacggt catgaagctc ggcatggcgc acccgatggg
     4201 accgctcgcg ctcgcggatt tcatcgggct cgatgtgtgt cttgccatat tggaggtact
     4261 ccatcacggg ctgggagacg acaagtaccg accgtgtccc ctgcttcgaa agatggtcgc
     4321 ggccggccac cttggtcgga aaaccgggcg ggggttctat gactacgatg aaaaacgtta
     4381 gcggtcagcg gtcagcggtc agcggggcag cctcgacggg gcaccagggc gatcctgctc
     4441 accgctcacc gctcaccgct cacgacatag atgtcttcca tcagatggag acgatggggc
     4501 acgagcaggt gctcctctcc cacgacccct cgtgcggcta tttcggcatc atcgcgatcc
     4561 acgatacgac gctgggaccc gcgctgggag ggacccgctt ctggcagtac gccaccacgg
     4621 atgaggcgat taccgacgcg ctccggttgg cgagggggat gacgtacaaa tcggccgtgg
     4681 cagggatcaa cctggggggc ggcaagtcgg tcatcatcgg tgacaacaag cgtgcggatc
     4741 gcgaggcgct gttccgcgcg cacgggcggt tcatcgagac gctggggggc cgctacatca
     4801 ccgccgaaga catcggcacc agtccggcag atatggagta catcaagctc gagaccgacc
     4861 atgtcgcggg gttgctcggg ctctcgggcg atccgtctcc cgtgaccgct tacggggtgt
     4921 acgtcggcat gaaggcggcg gccaagttcc gctggggcag cgacaacctg tccggcaaga
     4981 cggtagcggt gcagggggcc ggcaaggtgg cgtaccatct catgcactat ctgcatgctg
     5041 aaggatccaa actcatcgtc accgacattg atgacgaaaa ggtcaggcgg gccgtccagg
     5101 agtttggcgc ccggccggtg ccgccgggcg cgatctacga ccaggaggcc gacatcttct
     5161 ctccgaatgc gctgggtgcc atagtaaacg acgagaccct gcctcggctc aaggtggaga
     5221 tcatcgccgg cggggcgaat aaccaactgg ccgaggatcg acatggcgac gagctggagc
     5281 ggcgcggcat cctctacgcc ccc
//
LOCUS       DASYRV010000413         2710 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_711413, whole genome shotgun sequence.
ACCESSION   DASYRV010000413 DASYRV010000000
VERSION     DASYRV010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2710
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_711413"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VGQ24_11125"
     CDS             complement(<1..214)
                     /locus_tag="VGQ24_11125"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEV8455439.1"
                     /translation="MIEIRQVQELSDFPPDVQKAIFGVPVRVRGGKPIITDGPFAETK
                     EQLAGFYLIKARDFDAIGIALKMPPAR"
     gene            complement(418..1446)
                     /locus_tag="VGQ24_11130"
     CDS             complement(418..1446)
                     /locus_tag="VGQ24_11130"
                     /inference="COORDINATES: protein motif:HMM:NF014273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HEV8455440.1"
                     /translation="MEQSALKVRRVPLDSLHLDPANARSHGPENMDAIVASLRRFGQA
                     EPLVVQKKTGRVIGGNGRLVAMKKLGLTECDVVELDVDDITATALGIALNRTSELASW
                     DEPALAKILEELRAEDALDGVGYSPEDIDALLADLQDADSTPAEVDDQGPEEPPEKPV
                     SRVSDLWLLGNHRLLCGDSTKAEDLARLMGGEKAALLSTDPPYCVDYTGDNRPIHDGK
                     RSGKDWSHVYREVDIKDLATFLDSVQRHSGARHQCGPHLHLARSRPAARPRPGLRAVR
                     HPLPPSHRLGEAHRSLRPQLLPVAPRALRLWLAEGPQAGPRPGAAEHRLGGGLGWETA
                     NHIVPSNE"
     gene            complement(1586..2047)
                     /locus_tag="VGQ24_11135"
     CDS             complement(1586..2047)
                     /locus_tag="VGQ24_11135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455441.1"
                     /translation="MKKIPADAFDFYFSLGPSRSYQAVADRYKVTKRAVTDLAKRERW
                     QARLEKVVAEARAKSDQRMAEVIEKERERHLQALRLVLGKGLESLKGMRFTQPMEAAR
                     AIGLAVREIRVTLGEPSDRTAVSVEETIKREYERWLMPAAGDPAANEEGGE"
BASE COUNT          428 a          877 c          878 g          527 t
ORIGIN      
        1 cgcgcgcggg cggcattttc aaggcgatcc cgatcgcgtc gaagtcccgc gccttgatca
       61 ggtagaaccc ggccagctgc tccttcgtct ccgcgaatgg accgtcggtg atgatcggtt
      121 tgccgccgcg cacgcgcacc ggcacgccga agatcgcctt ctggacgtcg ggcggaaagt
      181 cgctgagctc ctgcacctgg cggatctcga tcacctcgtt ctctgacgcc gggcaccgcc
      241 ttctgccagc gaaggatggc cccgtcgacg aacgccggcg agatctccat cgccctgcac
      301 ttccggccgc gcctctcggc agcgatgatc tggctcccgc tcccggagaa aggctcgagc
      361 accaccgcgc ccggcttcgt gtgctgctcc atggggatct cgaagagccg cgttggctta
      421 ctcgttggat ggaacgatgt gattcgctgt ttcccatccc agtcctcctc ccagacggtg
      481 ttcagctgcg cctggccgtg gaccggcttg tggcccttcc gccagccaaa ggcgcagggc
      541 tcgtggcgcc actggtagta gctgtggccg aagactccgg tgggcttcac ccagacgatg
      601 acttggtgga agaggatgtc gaaccgctcg aagacctggg cgaggacgtg ctgctggacg
      661 tgagcgtgcc agatgtagat gggggccgca ttgatgacgt gcgccagaat ggcgctgaac
      721 cgagtcgagg aacgtggcga ggtccttgat gtccacctct cggtagacgt gggaccagtc
      781 cttcccactc cgcttgccgt cgtggatggg ccggttgtcg ccggtgtagt ccacgcagta
      841 cggtgggtca gtcgagagaa gcgcggcctt ctcgccgccc atcaaccgcg ccagatcctc
      901 ggccttcgtc gagtctccac agaggagcct gtggttcccg agcaaccaaa ggtcgctaac
      961 ccggctgacc ggtttctcgg ggggctcctc cggtccttgg tcgtcgacct cggccggagt
     1021 gctgtccgca tcctggagat cagcgaggag agcatcgatg tcctctggcg aatatccgac
     1081 accatcaagc gcgtcctcgg cgcgcagctc ctcgaggatc ttcgccagcg ccggctcatc
     1141 ccaggatgcg agttcgctcg tgcggttcag ggctattccg agcgccgtgg cggtgatgtc
     1201 gtccacgtcg agctccacca cgtcacactc cgtcaatccg agtttcttca tggccaccag
     1261 ccgaccgttg ccgccgatga cgcggccggt cttcttctgg accaccaggg gctcggcctg
     1321 gccgaagcgc cgcaggctgg cgacgatggc gtccatgttc tccgggccgt gagaacgggc
     1381 gttggcggga tcgaggtgaa gggaatcgag gggaacgcgc ctgaccttca gtgcggattg
     1441 ctccatgcca gctccgggaa cggaggctca cgtcttggaa gtggcttaga gcttgccagg
     1501 cggcttggag gtcagctcag atttctggtg aggattctac tcggtggtcc ggtcagtcgc
     1561 tatctcggtt cggtgaacct cgagactact cgcccccctc ctcgttggcg gcgggatcgc
     1621 cggcggccgg catgagccac cgctcgtact cccgcttgat ggtctcctcg acgctcaccg
     1681 ccgtccggtc ggagggctca cccagcgtga cccggatctc gcggactgca aggccgatgg
     1741 cccgcgccgc ctccatcggc tgagtgaatc gcatgccctt gagcgactcg agccccttgc
     1801 cgagcaccaa ccgcaacgcc tggagatggc gctccctctc cttctcgatg acctcggcca
     1861 tcctctggtc cgatttcgcc cgggcctctg ccacgacctt ctcgaggcgc gcctgccagc
     1921 gctcccgctt ggcgaggtca gtcaccgccc gcttcgtcac cttgtagcgg tccgccaccg
     1981 cctggtagct gcggctggga ccgagcgaga agtagaagtc aaacgcatcg gccgggatct
     2041 tcttcatttc ctcgccatcc cttttggatt tcagggggta ctttttggga atcggcttgg
     2101 agttctcgcc gcttggaggt ggctcagggc tcagggccat tttaccgcgg ccggtgaaga
     2161 ggatcaggcc tctgtggaag ttgcggggaa ggtcggcatc gccacgaggg ctgtgggggg
     2221 gaagttgggc gggcgatcaa ccgaacggcc tggtaactgg cgcggagact ggggttgaag
     2281 gtcgaaacgc ctacaagcct cgaaccctgg ccatcctgcc tgacagcggc ggtgacgctg
     2341 gaggagcgcg gcccccaccg aggcggctag ttgccaactt ccccggtttt cgggcctttc
     2401 actggtgctt ccctggcgaa acctatctaa ctacaatagc ggtagaatct tgcgcgaccg
     2461 agaaggtttc cagctgcccc gacaaaatgg ccccaatcgg ggcagttgcg gggaaggttc
     2521 ggggaacaat gtgccagaat ggcggctacc cccggcgaat ttcctgcatc atgcgacctc
     2581 gggcctggcc acgatcgcgg ccgttccggg gaaccggcgg ggaccttggc caggtcctgg
     2641 ccgggtcagc atcgaggtgg gccaggtcac attgcaccgg ggattcgcca ctgctctatc
     2701 attcacggcg
//
LOCUS       DASYRV010000414         1970 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_168671, whole genome shotgun sequence.
ACCESSION   DASYRV010000414 DASYRV010000000
VERSION     DASYRV010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1970
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168671"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1184)
                     /locus_tag="VGQ24_11140"
     CDS             complement(<1..1184)
                     /locus_tag="VGQ24_11140"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006635 - fatty acid beta-oxidation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HEV8455442.1"
                     /translation="MSDAFITAAVRTPIGRAGGALAEVRPDDLAAIAIRALIERARIP
                     ADRIEDVILGCANQAGEDNRNVARMAALLAGLPVKIPGQTVNRLCGSGLQAVASAAHA
                     VRAGEGGLFVAGGVESMTRAPQVILKSGRPWDRSPPVVADSTVGWRFVNPRMPPHWTI
                     SLGETAERVAQTYRIDRQQQDAFALESQRRAQAAVGSGVFADELVPVDVPGHTNETIS
                     QDEPPRPGLTLGALAALEPAFVKHGTVTAGTSSGINDGAAALSVASAEMLEELALEPL
                     ARIVATAVAGVDPSCMGLGPIPATRKALERAGISAEQLDLIELNEAFAAQAIACIREL
                     GLDPARVNIYGGGIALGHPLGASGARILTTLTHALRRTGGRYGLATMCVGVGQGIAMV
                     IEA"
     gene            1248..1335
                     /locus_tag="VGQ24_11145"
     tRNA            1248..1335
                     /locus_tag="VGQ24_11145"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1282..1284,aa:Ser,seq:gga)
     gene            1412..>1970
                     /gene="msrP"
                     /locus_tag="VGQ24_11150"
     CDS             1412..>1970
                     /gene="msrP"
                     /locus_tag="VGQ24_11150"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF003767.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016667 - oxidoreductase activity, acting
                     on a sulfur group of donors [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HEV8455443.1"
                     /translation="MLIRRPTDIPSSEITDESLFWNRREFLKAAGIGLAAAGGLIPTL
                     ARGRLGLDDDKLTPYEDITGYNNYYEFGTDKGDPKQNATRFRTRPWKVEVAGEVKRPA
                     VYDVDELLKPFTPVERVYRHRCVEAWSMVVPWLGIPLAGVIDRLEPTSTAKYVEFTTL
                     LDPAQMPGQRRRVLDWPYVEALRLDE"
BASE COUNT          326 a          687 c          639 g          318 t
ORIGIN      
        1 gcctcgatca ccatggcgat accctggccg acgcctacgc acatggtcgc gagtccgtag
       61 cggcctcccg tacgccggag cgcatgggtc agggtggtaa gaatccgcgc gccgctggcc
      121 ccgagcggat gacccagggc aatcccaccg ccgtagatgt tgaccctcgc agggtccaaa
      181 cccagctcgc ggatacacgc gatggcctgc gcggcaaagg cctcattcag ctcgatcagg
      241 tcgagttgct cggccgagat ccctgcccgc tccagggcct ttcgagtcgc cggaatcggt
      301 cccaggccca tgcagctggg atcgacgccc gccacggccg tggcgacgat ccgcgccagt
      361 ggctcgagcg cgagctcctc gagcatctcg gcactcgcaa ctgagagggc cgccgcgccg
      421 tcgttgatgc cgctcgacgt cccggcggtg acggtgccgt gcttgacgaa cgcaggctcg
      481 agcgcggcca aggcgcccag cgtaagtccg ggccgggggg gctcatcctg tgagatcgtc
      541 tcattggtat ggcccgggac gtccacgggc accagctcgt cggcgaagac cccggagccg
      601 accgcggcct gagcccgccg ctggctctcc agggcaaacg catcctgctg ctgccggtcg
      661 atgcggtagg tctgggccac acgctcagcg gtttcgccga gggagatcgt ccagtgaggc
      721 ggcatgcgtg gattcacgaa gcgccagccc acagtgctgt ccgccacgac cggcggcgaa
      781 cggtcccacg gtcgcccgct cttgagtatc acttggggtg cccgggtcat actctccacc
      841 ccgccggcta cgaacaggcc gccttcgccg gctcgaaccg catgagcggc cgacgccacc
      901 gcctggaggc ccgagccgca cagtcgattc acggtttgac cgggtatctt gacgggaagc
      961 ccggccagaa gggctgccat gcgggcgacg ttccgattgt cctctccggc ctggttggcg
     1021 cagccgagga tgacgtcctc gatgcggtcg gctggaattc gcgcccgctc gatcagtgcc
     1081 cggatggcaa tggctgcgag atcgtcggga cgcacctccg ccagcgcgcc gccggcccga
     1141 ccgatcgggg tgcgcaccgc cgcggtgatg aaggcatcgc tcaccctgtc cgcctcacgt
     1201 tgacctccct ctgcaagacc gctaagttgc cgcccggcaa cgattcagga caggtggccg
     1261 agcggctgaa ggcgcacgcc tggaaagcgt gtatacgtca aaagcgtatc gagggttcga
     1321 atccctccct gtccgtgccg gggaaccgtt tcgctccctc tgacgtatcc ctaagggtag
     1381 cgctggtcca cggtttccta agggagtagg catgctcatc aggcgcccca ccgatatacc
     1441 ctcctcggaa atcaccgacg agtcgttgtt ctggaaccgg cgcgagtttc tcaaagccgc
     1501 cggcatcggt ctggcggcag ccggcggact gatccccacg ctcgcccgcg gccgcctcgg
     1561 cctcgacgat gacaagctca cgccgtacga ggacatcacc ggctacaaca attactacga
     1621 gttcggtacc gacaagggcg accccaagca gaacgcgacc cgctttcgca cccgcccctg
     1681 gaaggtcgag gtggccggcg aggtcaagcg gcccgcggtc tacgatgtcg atgagctgct
     1741 caagcccttt accccggtcg agcgagtgta ccggcatcgg tgcgtggaag cctggtccat
     1801 ggttgtccca tggctcggca tcccgctcgc cggcgtcatc gaccggctgg agccgacctc
     1861 gacggcgaag tatgtggagt tcaccaccct gctggatccg gcccagatgc cggggcaacg
     1921 gcgccgggtc ctcgactggc cctatgtcga ggcactgcgc ctggacgaag
//
LOCUS       DASYRV010000415         1962 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_4107247, whole genome shotgun sequence.
ACCESSION   DASYRV010000415 DASYRV010000000
VERSION     DASYRV010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1962
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4107247"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..686)
                     /locus_tag="VGQ24_11155"
     CDS             complement(<1..686)
                     /locus_tag="VGQ24_11155"
                     /inference="COORDINATES: protein motif:HMM:NF027232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455444.1"
                     /translation="MARSFSPFGTIVVVLLALLSPPSLVAQAPAPAPPRQPMVNASSD
                     PLLAPFRFRSIGPASMGGRIDDIAVSESDPNIIYVGYAVGGVFKSENNGTTFEPVFQS
                     YATASIGDIAIHPSNPNIVYVGTGEPNNRQTTSFGDGIYKSTDGGKSFSNIGLRETQS
                     IARIVIDPRNPEVVYVASPGHLFGPNPDRGVYKSSDGGKSWNKVKFIDDYTGFTDLVM
                     DPSNSNVLYAA"
     gene            complement(750..>1962)
                     /locus_tag="VGQ24_11160"
     CDS             complement(750..>1962)
                     /locus_tag="VGQ24_11160"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEV8455445.1"
                     /translation="IFDPLGAIRLVGGIAIDITERVRAEEALRQADRRKDEFLATLSH
                     ELRNPLAPLRNSLHLLRTRGGDRKSERTYEMMEQQLNRLVRLVDDLLEVSRITGGKIA
                     LRKEPVSLASVVESAVETSRPLLEAASHQFRVQLPQDPLVVEADSMRLAQVVSNLLNN
                     AAKYTQEGGHVTLSAWREGEEAVLRVADDGLGIPREMLPRVFEMFAQVDRTLKRAQGG
                     LGIGLALARSLVEMHGGRIEAHSAGLHQGSEFVVRLPLSRRTPLVSVPAEERGGRTVP
                     IMAHRVLVVDDSRDGADSLAMVLQTMGAYPLVAYDGPSALAAIRTERPTVVLLDLGMP
                     GMDGYEVAAEIRADPSCAGVRLIALTGFGSEEERRRSREAGFDDHCVKPVDPVRLQLL
                     LASPKAPAPST"
BASE COUNT          331 a          620 c          688 g          323 t
ORIGIN      
        1 gcggcgtaga gcacgttgct gttggaggga tccatcacga ggtcggtgaa cccggtgtag
       61 tcgtcgatga acttgacctt gttccagctc ttcccgccgt cgctgctctt gtacacgccg
      121 cgatcggggt tgggtccgaa aaggtggccc ggggaggcga cgtagaccac ctccgggttg
      181 cgcgggtcga tcacaatgcg cgcgatcgac tgggtttcgc ggaggccgat gttgctgaag
      241 ctcttgccgc catcggtgct cttgtagatc ccgtccccaa acgaggtggt ttgccggttg
      301 ttgggctccc cggttccgac gtacacgata ttcgggttgc tgggatgaat cgcgatgtcg
      361 ccgatcgacg ccgtggcata gctctggaag accggctcga acgtggtgcc gttgttctcc
      421 gacttgaaca ccccgccgac cgcatagccg acatagatga tgttgggatc gctttcggag
      481 accgcgatgt cgtcgatccg gccgcccatg ctggcgggcc cgatcgagcg aaagcggaag
      541 ggggcaagca ggggatcgct ggaggcattt accatcggct gacgcggcgg cgcgggggcg
      601 ggcgcttgag cgacgagact cgggggagag agcagggcca gcagcacaac gacgattgtc
      661 ccgaaagggg agaacgaacg ggccattgga cgtatcctgg tggggggtgg agcactgccg
      721 cactacggaa gctacgccga actgcgggat caggttgaag gggcaggcgc cttcggggaa
      781 gccagcagga gctggagccg cacgggatcg accggcttga cgcagtggtc atcgaatccg
      841 gcctcgcggg aacggcggcg ctcctcttcc gagccgaagc ccgtgagggc gatcaaccgg
      901 acgccggcac aggatggatc cgcccggatt tcggcggcga cttcgtagcc gtccattccc
      961 ggcatcccga gatcgagcag gaccacggtg ggacgctccg tgcgaatggc ggcgagggca
     1021 gaggggccgt cataggccac cagggggtag gcgcccatgg tctgcagcac catcgccagg
     1081 ctgtcggcac catcccggct gtcgtccacg accagcaccc ggtgcgccat gatcgggacc
     1141 gtcctgccgc cgcgttcctc ggcgggaacg gagaccagcg gggtacggcg actgagcggg
     1201 aggcgcacga cgaactcgct gccctgatgc aggcccgcgc tgtgagcctc gatgcgtccg
     1261 ccgtgcattt ccaccaggct gcgcgccagc gcgagcccga tcccgagtcc accctgggcg
     1321 cgcttcaggg tgcgatcgac ctgggcgaac atctcgaaga ctcgcggcag catttcgcgg
     1381 ggaatgccga ggccatcgtc cgcgacccgc agaaccgcct cctcgccttc ccgccaggcg
     1441 gaaagggtaa cgtgcccgcc ttcctgggtg tacttggccg cgttgttgag caggttggag
     1501 accacctgcg ccaggcgcat cgagtccgcc tcgacgacca gcggatcctg cggcagctgc
     1561 acgcggaact ggtgagaggc agcctcaagc agcggccggc tggtctcgac ggcgctctcc
     1621 accacgctcg ccagcgatac tggctctttg cgcagcgcga tcttcccgcc ggtgatgcga
     1681 gagacctcga gcaaatcgtc gaccaagcga accaagcggt tgagctgctg ctccatcatc
     1741 tcgtaggtgc gctccgattt ccggtcgccg cctcgcgtcc gcaggaggtg cagcgagttg
     1801 cgcagcggtg cgagcggatt gcggagctca tgggacagcg tcgcgaggaa ctcgtccttg
     1861 cggcgatcgg cctggcgcag ggcctcctcc gcgcggaccc gctcggtgat atcgatcgcg
     1921 atcccgccga ccagccggat agcgccgagc gggtcgaaga tc
//
LOCUS       DASYRV010000416         6635 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2374363, whole genome shotgun sequence.
ACCESSION   DASYRV010000416 DASYRV010000000
VERSION     DASYRV010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6635
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2374363"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            18..6083
                     /locus_tag="VGQ24_11165"
     CDS             18..6083
                     /locus_tag="VGQ24_11165"
                     /inference="COORDINATES: protein motif:HMM:NF028476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucoamylase family protein"
                     /protein_id="HEV8455446.1"
                     /translation="MALAIVFLPHQAWVSADAIVRTLWRMAVSRRHLLEWRTASQTER
                     AMESSLRAVLRGMWPAVVLAGAIAAAVIWRAVAGTGPEVPVWQLAVAVLPLIVAWIAS
                     PAIAYFLGTPVVRREQRLPPESRRQALRYALLHWRFFDRFVTAESNWLAPDNFQDDPK
                     PVVAMRTSPTNVGLQLLATASAWDLGFITLDDMTRRLELAFRALERMRRFHGHFYNWY
                     NLLDLNVLEPAYVSTVDSGNLAGHLIALRQACLAVADEPVYDARIWRALDTALALADE
                     RLRKLAPGHPAAQYLKTAHAALVASRREPAADTALARVAEPLKRVEAALSGAGLAAEA
                     ADGATEWVSWSLRLITDHREWVEGLGGEGRPRNDSLSPFATLSQLAEQSPAAAKLMKR
                     LEVIAERAYDYAMEMDFKFLFDDERKLFAIGFQQSTHSLDGSYYDLLASEARLASFVA
                     VAKNDVPVDHWFRLGRALTYAAGAPALVSWSGSMFEYLMPMLVMRSYPHTVLAQTYDG
                     ALSRHRSYGAERGVPWGVSESAFNVRDRHLTYQYRPFGVPDLALKRGLGRELVVAPYA
                     SVLATMVDPGRALANLDVLENLGALGPYGFRDAIDYTRPDPEKDWAVVQTYMAHHMGM
                     GLVALTNALTSQVWQRRFHAEPVVRSAELLLHERIPRRVVPQEPQGARVDEGLPEAEV
                     DRPSVRELDTPHTVQPHVALLGHLPYTIMVSHCGAGYSRYETLAVTRWHSDGTRDATG
                     QFCYVKDLSNGRVWSVAHQPVCAPADWYNAFLATDRVTFHRADGDIETRTEIAVVPED
                     SAEVRRITLTNNSDETREIEVTSYGEIVLAPPEADRSHPAFGNLFVETEWHEWCNAIT
                     ATRRPRSSQEQPLWCVHVVDTGKERVGRVSHETDRARFLGRGRSTRDPVVLEEDEELS
                     GTTGSVLDPIFALRSRVRLDPGQSASVAFTTLVATSRDRAFELADRYRDAHAAQRALD
                     LAWTSSQVELREFHLTPGDAAVFQELAGHLLYGSAALRAPQSELRRNRGSQPLLWGNS
                     VSGDWPILLATIDSADGLPTLRQILTAHRYWRRRGMMVDVVVLIARPETYYQDLADRV
                     SSAVHALSDMASIDKPGGVFVRRRDLLKDEELLMLRATARVHISCDGRGLGRILATTV
                     PEESPAEEELEGFPAGPRPPARSDSRMGRVARQLKIHLPTVPALIAAATSALRPPRPP
                     ARTEPLHPALENGFGSLTDEGDYEIRVSGDRVPPAPWANVIANRHGGFLVTERGGQCT
                     WAGSSQFFRLTPWHNDPVSDPASEVVYLQDDETGELWCATPGPIRQDTPYIVRHGAGS
                     SSFEHERDGITTHLTVGMAEESPVKLALLRVTNGGTHARRLTLTTYMEWTLGTLREHT
                     QHQVQTRFDRERATIFAQNYFDPLFAGWTAFHAITEPVTGYTGSRRDFLGRNGTTEAP
                     AALQAGATLTGTTGAGIDPCAALQCGLELAPGETREIAILLGAADSELAARQAVERYR
                     DVSRARAEVESAVAGWAQRLSAITVRTPEPTFDAMVNRWTLYQAMSCRMWGRTALYQS
                     SGAYGFRDQLQDVMAFVYAEPALAREHILRAASRQFVEGDVQHWWHPHSGRGVRTRFS
                     DDLAWLPYVVDHYVRVTGDASVLDDMVPYLTMRQLEPQEHEVYDLPQVTEERGSVYQH
                     CLRALRRACTSGVHGLPLIGIGDWNDGMNRVGVEGKGESVWLAWFLITTLRAFAEHAE
                     GRADTAVAAELRRQADGYTAAVETHGWDGDWYRRAYFDDGTPLGSRESDECRIDSIAQ
                     SWSVISAAGRGDRRTVAMESLEQHLVREDARLLMLLTPPFDKTPKDPGYIKGYLPGVR
                     ENGAQYTHAALWAVLATALRGNGDRAFELYQMLNPLTHARTPEEVATYKVEPYVVAAD
                     VYTAEGQLGRGGWTWYTGAASWMYRVGLEGILGFRKRGDTLFIEPRAPASWPEYTIEY
                     RYGKSVYVIAVRSDGNGAGEPLEVTIDGRVSEAPGIPLVDDGERHTVVVRARVTSEAG
                     VAARE"
     gene            complement(6306..>6635)
                     /locus_tag="VGQ24_11170"
     CDS             complement(6306..>6635)
                     /locus_tag="VGQ24_11170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455447.1"
                     /translation="SAPVLQNTLRNQRQPSQRSRYEPIAVYYLAEQAKANGVDLDQAE
                     GPWRAGARELSRPGRNSLHNIPVVTNEHTEVMVDTAEHAVDVAGLLNWCGVHELEPIP
                     ELTPSAV"
BASE COUNT         1035 a         2279 c         2285 g         1036 t
ORIGIN      
        1 cgacgagcat ccagcaggtg gcgctggcga tcgttttcct cccccaccag gcctgggtct
       61 ctgccgacgc gatcgtccgc accctgtggc ggatggcggt ctctcgccgc cacctgctcg
      121 agtggcggac cgcctcccag accgagcgcg ccatggagag ctcgctccgc gctgtcctgc
      181 gcggcatgtg gccggcggtg gtgctcgccg gtgccatcgc cgcggcggtc atctggcgcg
      241 cggtcgccgg gacgggccct gaggtccccg tctggcagct cgcggtggcg gtcctgccgc
      301 tgatcgtggc ctggatcgcg tcaccggcca tcgcgtactt cctcggcacg cccgtcgtgc
      361 gccgggagca gcggctccct cccgagagtc ggcgtcaggc gctacgctac gccctgctgc
      421 actggcgctt cttcgatcgc ttcgtcaccg cggagagcaa ctggctcgcg ccggacaact
      481 tccaggacga tcccaagccg gtcgtcgcca tgcgcacctc tcccaccaac gtcggcctcc
      541 agctgctggc gacggcaagc gcctgggacc tgggcttcat caccctcgac gacatgaccc
      601 ggcgcctgga gctcgccttc cgcgcactgg agcggatgcg gcgcttccac gggcacttct
      661 acaactggta caacctcctg gatctcaatg tgctggagcc ggcctacgtg tccacggtgg
      721 acagcggcaa cctggccggc cacctcattg cgctgcggca ggcgtgcctt gcagtggccg
      781 acgagccggt gtacgacgcc cgcatctggc gagcgctcga caccgcgctg gccctggccg
      841 acgagcggct gcggaagctg gccccgggcc acccagcagc gcagtacctc aagaccgcgc
      901 acgctgcgct ggtcgcgtcg cgccgagaac ctgccgccga caccgctctc gcccgtgtcg
      961 ccgagccact caagagagtc gaggcagcgc tcagcggagc cggactggcg gccgaggcgg
     1021 cggacggggc aacggaatgg gtctcatgga gccttcggct gataaccgat caccgcgagt
     1081 gggtggaggg cctgggcggc gaagggcgcc ctcgcaatga ctcgctaagc ccgttcgcca
     1141 ccctgtctca gctggcggag cagtcaccgg cggcggcgaa gctgatgaaa cgcctcgagg
     1201 tgatcgccga gcgagcctac gactatgcca tggagatgga cttcaagttc ctcttcgacg
     1261 acgagcggaa gttgttcgcc atcggcttcc agcagagcac tcactcgctg gacgggtcgt
     1321 actatgatct cctggcctct gaggcacggc tggcaagctt cgtggccgtg gccaagaacg
     1381 acgtcccggt agaccactgg ttccgcctgg gccgcgcgct gacctacgct gccggagcgc
     1441 cggcgctggt gtcatggagc ggcagcatgt tcgagtatct gatgccgatg ctcgtcatgc
     1501 ggtcgtatcc ccacaccgtg ctggcgcaga cctatgatgg tgccctatcc cggcaccgct
     1561 cctacggcgc cgagcgtggc gtgccctggg gcgtgagcga gagcgcgttc aacgtccgcg
     1621 accggcacct cacctaccag taccgaccct tcggggtgcc cgatctcgcc ctcaagcgcg
     1681 ggctgggccg ggagctggtg gtcgcgccct atgcctcggt gctggcgacc atggtagacc
     1741 ccgggcgggc cctggcgaac ctggacgtgc tggagaacct gggggcgctg ggaccctacg
     1801 gcttccgcga cgccatcgac tacacccgtc ccgaccccga gaaggactgg gccgtagtcc
     1861 agacctacat ggcgcaccac atgggcatgg gtctggtcgc cctgaccaac gcgctgacct
     1921 cccaggtgtg gcagcgccgc ttccatgctg agccggtggt gcgctcggcc gagctgctgc
     1981 tacacgagcg gatcccgcgc cgggtggtgc cacaggagcc gcagggagcc cgggtcgatg
     2041 aggggctgcc cgaggcagag gtggatcgcc cgtccgtgcg cgagctcgac accccgcata
     2101 cggtgcagcc gcacgtcgcc ctgctgggtc acctgcccta caccatcatg gtgagccact
     2161 gcggcgcggg gtacagtcgc tacgaaacgc tcgcggtcac ccgctggcac tcggacggga
     2221 cccgtgatgc cacggggcag ttctgctatg tgaaggacct gtcgaacggg cgcgtctggt
     2281 cggtggcgca ccagccggtg tgcgcgcccg cggactggta caacgccttc ctcgccaccg
     2341 accgggtcac gttccatcgc gccgatggag acatcgagac ccgcaccgag atcgcggtcg
     2401 tcccagaaga ttcggctgag gtacgtcgca tcaccctcac caacaacagc gacgagaccc
     2461 gcgagatcga ggtcaccagc tacggcgaga tcgtgctggc gcctccagag gccgaccgct
     2521 cccacccggc tttcggcaac ctgttcgtgg agaccgaatg gcacgagtgg tgtaatgcca
     2581 tcaccgccac ccggcgcccc cgctcctccc aggagcagcc gctctggtgc gtgcatgtgg
     2641 tcgataccgg caaggagcgg gtgggacggg tgagtcatga gaccgaccgg gcccgcttcc
     2701 ttggccgggg ccgctcgacc cgcgacccgg tggtgctcga ggaagacgaa gagctctccg
     2761 gtacgaccgg ctcggtgctc gaccccatct ttgccctccg cagccgtgtc cggctggatc
     2821 cagggcagtc cgcctcggtg gcgtttacca ccctcgtggc gacctcccgg gaccgcgcct
     2881 tcgagctggc cgaccggtac cgggacgccc acgcggcgca gcgggcactc gacctcgcct
     2941 ggacctcgag ccaagtggag ctgcgcgagt tccaccttac accgggtgat gcggcggtct
     3001 tccaggagct ggccgggcac ctcctctatg gaagcgcggc attgcgggcg ccccagtccg
     3061 agctccgccg aaaccgcggc tcccagccgc tgctgtgggg gaacagcgtc tccggcgatt
     3121 ggcccattct gctggccacg atcgactccg cggacgggct gcccaccctt cgccagatcc
     3181 tgacggcgca tcgctactgg cgtcgccgag gcatgatggt cgatgtggtc gtgctcatcg
     3241 cccgtccgga gacctactac caggatctgg ccgaccgggt cagctcggcg gtgcatgcct
     3301 tgagcgacat ggcctccatc gacaagcccg gtggcgtctt tgtccggcgc cgggacctgt
     3361 tgaaggacga ggagctcctc atgctgcggg ccaccgcccg ggtgcacatc tcctgcgacg
     3421 gccggggtct gggtcgcatc ctggcgacga cagtgccgga ggagtcgcct gccgaagagg
     3481 agctcgaggg cttcccggcc ggcccccgtc ccccggcccg cagcgactcg cggatgggaa
     3541 gagtggcccg acaactgaaa atccatttgc cgaccgtgcc ggcgctgatc gcggcggcca
     3601 cgtccgcgct gcgacccccg cgtcccccgg ctcgcactga gcccttgcac ccggcgctcg
     3661 aaaacggctt cggctctctc accgacgagg gtgactacga gatccgggtc tcgggtgatc
     3721 gggtgccgcc ggcgccgtgg gcgaacgtga tcgccaaccg ccacggcggc ttcctcgtca
     3781 ccgagcgagg cggccagtgc acctgggccg ggagcagcca attcttccgg ctgacgccgt
     3841 ggcacaacga tccggtcagt gacccggcga gcgaggtggt gtatctccag gacgatgaga
     3901 ctggggagct gtggtgtgcc acgcccgggc cgatccgcca ggacacaccg tacatagttc
     3961 gccatggtgc gggcagctcg tcgttcgagc acgagcggga tggcatcacc acccacctca
     4021 ccgtcgggat ggcggaggag tcgccggtca agctcgcgct gctccgggtg accaatggcg
     4081 gcacccatgc ccgccgcttg acgctgacga cctacatgga atggactctg ggcacgctgc
     4141 gggagcacac ccagcaccag gtgcaaacca ggttcgaccg ggagcgggcc acgatcttcg
     4201 cgcagaacta tttcgacccg ctgttcgccg ggtggaccgc gttccacgcc atcaccgaac
     4261 cggtgactgg ttataccggg agccggcgcg atttcctcgg caggaacggc acgaccgagg
     4321 caccagcggc actccaggcc ggtgccacgc ttacgggcac cacgggagcg ggcatcgatc
     4381 cctgcgccgc gctacagtgc ggcctcgagc tggcgccggg cgagacccgg gagatcgcga
     4441 tcctgctcgg cgcggccgac agtgagctcg cagcgcggca agccgtcgag cggtaccgcg
     4501 acgtgtcgcg cgcccgggcg gaggtggaaa gtgccgtcgc cggctgggcg cagcggctct
     4561 ccgcgatcac ggtacggacc cccgagccta ccttcgacgc gatggtcaac cggtggaccc
     4621 tctaccaggc gatgtcctgc cggatgtggg gccgtacggc gctgtaccag agcagcggcg
     4681 cctacggttt ccgcgatcag ctccaggacg tgatggcgtt cgtctatgcc gagccggccc
     4741 tggcgcggga gcacatcctc cgcgccgcgt cgcgccagtt tgtcgagggc gacgtgcagc
     4801 actggtggca tccgcatagc gggcgcgggg tccggactcg gttctccgac gatctggcct
     4861 ggctccccta cgtggtcgac cactacgtcc gagtcaccgg agatgcctcg gtcctggacg
     4921 acatggtgcc atatctgacc atgcgccagc tcgagcccca ggagcacgag gtgtacgacc
     4981 tgccgcaggt gaccgaggaa cgtggcagcg tgtaccagca ctgcctccgg gctctccgcc
     5041 gggcttgcac ctcgggcgtg cacggcctgc cgctgatcgg catcggcgac tggaacgacg
     5101 gtatgaatcg ggtcggggtg gagggaaagg gtgagagcgt gtggctcgcg tggttcctca
     5161 tcaccacact ccgggccttc gcggagcacg cggaagggcg cgccgatacc gcggtggcgg
     5221 ccgaactccg gcggcaggcc gatgggtata ccgccgcagt cgagacccac ggctgggatg
     5281 gtgactggta tcgccgagcc tacttcgacg acggcacccc gctcggctcg cgcgagagcg
     5341 acgagtgccg gatcgactcc atcgcccaga gctggagcgt catttcagca gccggacggg
     5401 gggaccggcg gacggtcgcc atggaatccc tggaacagca tctggtgcgg gaggatgccc
     5461 gtctcctcat gctgctcacc ccgccgttcg acaagacgcc gaaggacccc ggctacatca
     5521 aggggtacct gcccggcgtg cgggagaacg gcgcccaata cacccacgcg gcgctgtggg
     5581 cggtgctcgc cactgcgctc cggggcaacg gcgaccgggc gttcgagctt taccagatgc
     5641 tcaacccgct gacccacgcc cgcacgccgg aagaagtggc gacctacaag gtcgagccct
     5701 atgtcgtcgc cgccgacgta tacaccgcag agggccagct cggccgcggt ggctggacct
     5761 ggtacaccgg cgcggcgagc tggatgtatc gggttgggtt ggaagggatc ctcggttttc
     5821 ggaagcgggg agacacgctg ttcatcgagc cgagagcccc ggcctcctgg ccggagtaca
     5881 cgatcgaata ccgctacggc aagagcgtgt acgtcatcgc cgttcgaagt gatggaaacg
     5941 gcgcgggtga accgctcgag gtaacaatag acgggcgagt ctcagaggct ccgggcatcc
     6001 cgctagtgga cgacggcgag cggcacacgg tggtggtgcg ggcgagggta acttccgaag
     6061 cgggtgttgc agctcgggag tgagcagggc gggaatgccg acggaggaag cccactgccc
     6121 cgcgcagccg ccacgggcat gggccctccg gccgttccac ggggcggggc ggccagcgga
     6181 ctggactggc cccgagggct gagcgcaagg agtgtggtgg ggggaagtcg gcgcttgaag
     6241 ccggaggggc tcaggtcagc ccgctggccg gtggggtggt accctcgcga tgactgcctc
     6301 gtgaatcaca ccgccgacgg agtgagctcc gggatgggct ccagctcgtg gacgccgcac
     6361 cagttgagca gcccggcgac atcgactgca tgctccgcgg tgtcgaccat tacttccgtg
     6421 tgctcgttcg tgaccacggg gatgttgtgg agactattac gtcccggccg gctgagctcg
     6481 cgtgcgccgg cccgccaggg gccttccgcc tggtcaagat ccaccccatt cgccttcgcc
     6541 tgttcggcca ggtaatacac cgcgatgggc tcataacgcg accgctggct gggttgccgc
     6601 tgattccgaa gggtgttctg caggactggt gcaga
//
LOCUS       DASYRV010000417        17889 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1621556, whole genome shotgun sequence.
ACCESSION   DASYRV010000417 DASYRV010000000
VERSION     DASYRV010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 17889)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17889)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17889
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1621556"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(152..466)
                     /locus_tag="VGQ24_11175"
     CDS             complement(152..466)
                     /locus_tag="VGQ24_11175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455448.1"
                     /translation="MIRLAVRSPMARARSSGQLTQVAGEARRILGDGAGRGEEGRGAV
                     GSELVVEMHVGDRLLDRRNERRADRAHQDTVSSPLHESGDALPCGAVILDILNDGKPG
                     PA"
     gene            465..2021
                     /locus_tag="VGQ24_11180"
     CDS             465..2021
                     /locus_tag="VGQ24_11180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455449.1"
                     /translation="MEAPFQPRRRLFPILLALVVAYLLIDLGVLAFRTYADMLDYRDA
                     RYPDSAVLLVVAHLVKTGHIYSDINLPPYLPSVYGPLYYLLLSLPYRLAVMLGTDPMV
                     FLRITTLIFALGCLGMIVAITRRIGASPGTGLLAALLAVERMWEGGAATVSLRPDLVG
                     LFFALLGVFLCLDEARRGVLTAGAVSVGVALLCKQTFVAAPVAIFLWLLWRRRFRAAA
                     WWVLVTGLTVGGGYALFIWREPLSLQLISALSRPIREYRGALQIALDAGHRLTAPLFF
                     LGLLYLWRHRDDRTVLLMLYILLAWCVALATIVQIGGAANYFYEPLMASAPLAAGVLI
                     WLDREQRRSTVPLSVLLALLQVTFLKPRLERAAAATRGIYFYKVQGHAEKKARWERFR
                     SVLAGRRLLARDPEIAAWSSPPVMPDPFLNRVLEMAGKWSSAPIVRAVEQGSYEAVVV
                     PDGAMEETEGFRGLLPWNLDLVASIRRRYELVCMMDQTDVWLPRGRSELRQLLPSADC
                     VEPGRQAAPR"
     gene            2092..2910
                     /locus_tag="VGQ24_11185"
     CDS             2092..2910
                     /locus_tag="VGQ24_11185"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEV8455450.1"
                     /translation="MFELQASLEESHWWFLGRRSILRTLVAAILPPRSGGTVIDIGCG
                     TGGNIAALAGDYRCVGLEPAAAALSLARRRYPSVRFVAGGDPALVAEAATPRTVILLT
                     DVLEHVADDFLLFSQVLAIMPAGSHLLLTVPANPALWSPHDVALAHYRRYDVARLRLV
                     WRQLPVRERLVTPFNARLYPLVRLRRAVAALSGASSGSRGTDLSLPPALLNRLLAAVF
                     AGERIPLVRALTHAAAPFRSGVSLLALLERQPGEVVARTRPPEVPADLHAPPAA"
     gene            2907..3638
                     /locus_tag="VGQ24_11190"
     CDS             2907..3638
                     /locus_tag="VGQ24_11190"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8455451.1"
                     /translation="MTTLLVIPAYNEARRLDLQAYGQALAAQAGLQLLFVDDGSTDAT
                     VALLRAFMASHPDRIGIRQEPINRGKAEAVRRGMLQALDSEAGIVGFWDADLATPLGE
                     LPALIAPLERDPAIQVVLGSRVRLLGRRIERRAQRHYLGRIFATAVSFALRAPIYDTQ
                     CGAKLFRPGAPLRDALTAPFRSRWIFDVELLARLDRRIPGGLLRGACEVPLREWTDVA
                     GSQVRWHAFLRAPFDLASIYWREVR"
     gene            3881..4756
                     /gene="rfbA"
                     /locus_tag="VGQ24_11195"
     CDS             3881..4756
                     /gene="rfbA"
                     /locus_tag="VGQ24_11195"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000857511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEV8455452.1"
                     /translation="MRKGIILAGGSGTRLHPITRAVSKQLLPIYDKPLVYYPLSVLML
                     SGIRDILVISTPRDLPAFESLLGTGEQWGLSFSFASQPAPAGIAQAFLIGRSFLGSES
                     SCLVLGDNVFYGQNLSHALQAAGARSSGATIFGYRVANPSAYGVVELSSTGQPVGIEE
                     KPERPRSHYAVTGLYFYDNQVVDIASHLRPSARGELEITDVNRHYLEHGTLSVELLGR
                     GNAWLDTGTHEDMIQASLFIETIERRQGLKVACPEEIAWRMGFIDAAQVARLAEPLER
                     SAYGRYLLEILREDA"
     gene            4759..5304
                     /gene="rfbC"
                     /locus_tag="VGQ24_11200"
     CDS             4759..5304
                     /gene="rfbC"
                     /locus_tag="VGQ24_11200"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016291874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HEV8455453.1"
                     /translation="MRALPTALDGVLIIEPQLFEDERGFFMEVWHLEKYRGLGIDATF
                     VQENHSRSGLGTVRGLHYQLVRPQGKLVRAVQGSVFDVAVDLRRSSPGFGRWTGATLS
                     AENRRMLWIPPGFAHGFAVTSPVADVVYLCTEYYAPAGDRTLQWNDPALGIPWPLEGE
                     TPLVSPKDAGGIPLDRAPVFP"
     gene            5301..6215
                     /gene="rfbD"
                     /locus_tag="VGQ24_11205"
     CDS             5301..6215
                     /gene="rfbD"
                     /locus_tag="VGQ24_11205"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008831 - dTDP-4-dehydrorhamnose reductase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HEV8455454.1"
                     /translation="MSEPEDTSEATAAGRIRVLLTGAGGQVGSAVTRRSPADATVVAM
                     DSATLDITDEPAVRAAVGAARPDLILNAAGYTAVDQAEVEPERAFLVNRDGPANLAAA
                     ARANGARIIHLSTDFVFDGARGEPYPPEAPCRPINVYGASKRAGEEAVQALAGDAALV
                     VRTSWVYAARGNNFVLTMLRLLREQPEVRVVTDQVGSPTWAVSLADALWRAARRADLS
                     GIHHWADAGVASWYDLAVATQEESVALGLLSRSVPIHAISSRDLPRPAKRPPFAVLDT
                     SLTTHALGARPAHWRVNLRLMLRELHAA"
     gene            6205..7320
                     /gene="rfbB"
                     /locus_tag="VGQ24_11210"
     CDS             6205..7320
                     /gene="rfbB"
                     /locus_tag="VGQ24_11210"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000699467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HEV8455455.1"
                     /translation="MRRNLLVTGGAGFIGANFVQYWLGAHPDDRVTVLDALTYAGNAA
                     NLAPVAERPGFSFVRGDIRDADLAGRLLVERRIDTIVHFAAETHVDRSIHAPDPFLQT
                     NVIGTHVLLKAARDAWGTDGGYPPSVRFHHVSTDEVYGSLAPDEPAFSEQTPYAPNSP
                     YAASKAAADHLVRAYHRTFGLPVTTSNCSNNYGPYQFPEKLVPLLLINALTGKALPIY
                     GDGLNVRDWLFVEDHCRAIEAILERGTVGETYNIGGGAELPNLRLVGELSRLLDEAFR
                     LDPGLAGSFPASPPARGGQTDSLVTFVADRPGHDRRYAMDGAKIARELGFRPMESLES
                     GLRRTIAWYLQEEPWWRAVMDGSYRAWISTQYGGGAA"
     gene            7317..8102
                     /locus_tag="VGQ24_11215"
     CDS             7317..8102
                     /locus_tag="VGQ24_11215"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEV8455456.1"
                     /translation="MIDGKRVMVVLPAYNAARTLEQTIAEIPSGIVDDILLVDDASQD
                     ATVEIARRLGIEHVVHPKNRGYGGNQKTCYTEALRRGADIVVMLHPDYQYTPKLIGAM
                     AWLAASNEFDVILGSRILGRGALAGGMPIYKYISNRILTAVENLLLGIKLSEYHTGYR
                     AFTREVLETLPLREGSDDFVFDNQMLAQAAAFGFRIGEISCPTKYFPEASSINFGRSV
                     VYGLGVLLTSLRFRLHRWGLRRDALFSPEGGKLGGAILPAPTE"
     gene            complement(8109..9983)
                     /locus_tag="VGQ24_11220"
     CDS             complement(8109..9983)
                     /locus_tag="VGQ24_11220"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase-related protein"
                     /protein_id="HEV8455457.1"
                     /translation="MLIGAAGPLAGRLREAAPAGFPRDPGGWLEGAGAIAATAPWGVA
                     GLDRGPGAAADPATGSWLVLSGRPVLLEREIGSLGEHPARWLLEALGTMGWQALGRVD
                     GGFGIAWYDGRCDRLHLLRDRFGMEPLFYSSRGPSLLFASRIRDLRATSLLDDGLSGQ
                     GLAEFLTFCFVPGSETLDAGVLRVPPGSRLSFDPARGTLTIERWYRLSFSAPSLTDEA
                     EIRLAFRGQLERATVRRLEGGVDPGVLLSGGMDSSAVATLVRRAHAGPLYTYSFRCEG
                     PAFDESYYARALAKELGTRHTEVPYGEAEAMGQRELVSQAEVPFCNVGINVGTWILGR
                     AARAETSYVLTGDGGDEFWGSHPVYAIQRLARYTERLPMPRVAYRALIRALRLVRDSD
                     RKRDLRAVLKRILPPDDVPRALGPYRWLTYFRPADYPALLTPAALALVRDCDPFRAVI
                     DAYEGYQGPDDNLSPHLYNDYVTASGYYFSRLALLRGLGVEARCPFYDRDLVELGARI
                     PARLKLEGIERTKRLFREAMEGVLPDVVNHRRDKLGHSVPLKNWLRQSGPLSAFLEEV
                     LAPSALEARGLIRAEPVATLIREHRERRQNHAHRLWALLTLELWLRARDNRGAGPVAA
                     "
     gene            complement(10012..11055)
                     /locus_tag="VGQ24_11225"
     CDS             complement(10012..11055)
                     /locus_tag="VGQ24_11225"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEV8455458.1"
                     /translation="MGAAWSPALDPAEGPNAGLDGGLVLVTGTTGFTGGHLCARLVQQ
                     GRRVRALVRDPARAAPTHPPGVELATGDLRNPESLARAAEGVQTVYHIAALFRPENVS
                     RREMFEVNVAGTRSLLEASARAGVRRFVHCSTVGVHGDVQDPPANEDSPLAPGDHYQL
                     SKLEGEQVAQEFLRDGRVPVVIFRPAGIYGPGDLRFLKLVRAVARRRFVMIGRGDIKY
                     QMVYIDDLVDGILRCGTLPAAVGRIYILTGEPAVSLRELVATIAEAVGVPAPRWRVPF
                     WPVYLAGAVCEALCKPFGLNPPLYRRRVDFFRKMRWFDIARARRELGFAPRIDLPTGI
                     RKTVAWYREHGYL"
     gene            complement(11056..11214)
                     /locus_tag="VGQ24_11230"
     CDS             complement(11056..11214)
                     /locus_tag="VGQ24_11230"
                     /inference="COORDINATES: protein motif:HMM:NF039953.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5989 family protein"
                     /protein_id="HEV8455459.1"
                     /translation="MSAGNLISESWAFLRVRKELWLLPLKPVLVPVGLLLVLAHGSAP
                     APFIYTNF"
     gene            complement(11418..12731)
                     /locus_tag="VGQ24_11235"
     CDS             complement(11418..12731)
                     /locus_tag="VGQ24_11235"
                     /inference="COORDINATES: protein motif:HMM:NF016056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DCC1-like thiol-disulfide oxidoreductase family
                     protein"
                     /protein_id="HEV8455460.1"
                     /translation="MSSVFRALDRHFFAPARLSDLALLRIVCVGGALLAFPPLWAVLH
                     YAQVDPSQFLPLPALKVLMLPLGGWGVRPEPMFLHAVQLGSLVVGVTALVGLYTRLSL
                     ILFTAGYALLTAHFYAFGVVHHTEAVPIIVLSLLAVSPSGAALSLDALLGRLRRAAER
                     QRFEPRPAMPAESGFARWPLRNAQWLLGMAYLSAGLSKLVNGGLAWFNGYTLVYYAAM
                     DGLLWGAPLAPALVGHPAVASLFSIGAVAFELTFWLAIVFPRLVPLYLLGGTAMHVSI
                     YLAQRAPFFQFIFLYAAFIECLRRAFLRAFPRAVTPPPAKWTVIYDGLCPLCIRSMTI
                     LDALDFRHRLSYLDLEADRSRLAALAPGVSAGEARAAMRVVAPGGQVYRGFFAFRELA
                     RILPPLWPFVPLLYLPFAATIGPRVYGLVARHRTRQVCRAETCAV"
     gene            complement(12728..13219)
                     /locus_tag="VGQ24_11240"
     CDS             complement(12728..13219)
                     /locus_tag="VGQ24_11240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455461.1"
                     /translation="MSVRKAFAVAATVVILGAQAWTIFPPGWGNAHYWPFIDYPMYSG
                     AYHEGDSVVRQELRATPCGAPGATVTLHIDSLPLEPWRYWPMLDRLAASPTPAPLLDT
                     LARFTRFTIHRDPCVLELWRQVLVIGPHGVRLEDTAWRRFRAWPLGPDSARGGVSPSG
                     ERH"
     gene            complement(13652..14941)
                     /locus_tag="VGQ24_11245"
     CDS             complement(13652..14941)
                     /locus_tag="VGQ24_11245"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8455462.1"
                     /translation="MLIVCYDYPDMRNSGVIRTYQLAKHLPALGWQPIILTAQPCSGN
                     QEYDIEASDGPSNCPRITVATSHLLVPFPSDPPEALPPQPGAGPQGTGLSARMVRLAS
                     QLAVPDGKIGWWPAAVRRGLRIGRDHRIRSCFSVSPRPTSHLVARRIARSLGIPWVAD
                     FALPWSDAHWLSGRPRFIERLDQKLEGVVVRSADHITVAYAEIARGLCVRHGAGAQKG
                     ISVVPTGFADELFARAAGVPRAKFTITYPGNHFSEAGRYGECFFRAADEWIGDDPGLS
                     DQVECVFIGKRDDDLLRQRAIMAHPEVVRLEPLVSHRACIEAILASHVCVVNTVGNRI
                     PAKVYECMRAGKPILALTEPGSDLERLMGQYAGGMAVPARDISAIRNALHRAWQARDA
                     TTAEPREAALPLERYSSEHSAEIVARILDGLLPARSG"
     gene            complement(15060..15767)
                     /locus_tag="VGQ24_11250"
     CDS             complement(15060..15767)
                     /locus_tag="VGQ24_11250"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEV8455463.1"
                     /translation="MSGALARHGRAFARSIRERGFLPSLRIALSTLWCAALDTLDERA
                     YRSNTAGNTPIQLAEIRSENKTHCSPYSTPSQFRLIRKSFKAVMELNGRGFSSSTLVD
                     FGCGKGRVLLVASEFGFKKVVGVEFSPELCREAEANIGTFIERKKKPFDFQVVNADAA
                     RFEIPPEADVFYFFAFDGHVLDQVAQNIVLSRQRFPRAIWAIYVKATFGEVFGARGFR
                     VVRELSWCGFPTKIYAL"
     gene            complement(15788..16960)
                     /locus_tag="VGQ24_11255"
     CDS             complement(15788..16960)
                     /locus_tag="VGQ24_11255"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEV8455464.1"
                     /translation="MAMTPGEVARELPTVMRDLYENHVTRHFKVIAPTVLHVNVNLRC
                     NTRCAMCNIWELKSPHALSPEQFDAIFADPVYAKVEYIILAGGEPTLRHDLPEIVEVM
                     HAHMPRLKKLLIPSNVINRASVQEQYPRIARYCAKHRIRLTLGVSLDGIGETHEKIRG
                     VKGGYAKVMESIEFMKGLQKEVPFNMSIDPTIFSMNIHELQQLKDLAERLNMPITFQI
                     ASVAEDYYHNSDVVDVLSVKAGDRNRLAEFLKRQVAESSLLDSLAYYYAEVVEHLEGA
                     PTRGVPCPFADQGLLLNPDGSLQYCHNSHPIGNVLEKSSTELYFGQANLAYRGTVVKD
                     NCPSCRMSCLFFVSLRKEVFPFLSFILKRMVGVHRLHWRKRRRAQPAEPARAGAPG"
     gene            complement(16988..>17889)
                     /locus_tag="VGQ24_11260"
     CDS             complement(16988..>17889)
                     /locus_tag="VGQ24_11260"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8455465.1"
                     /translation="LYRAASRLLQTESFDYLLVDYGLAAIYGRLLAGRFGIPMIYCSH
                     NVEYRMYLEQSKADFRRGVLAPYVYLAERAACRAAKLVVAISESDGREYLKWIGPDRI
                     EVIPQGFDADVCNPFYPPPPLSPAVVLFVGNFRLDHNREAARLIVQEISPEVLRARPD
                     AVFQLIGSEPPRQWSGPHVEYTGFVDDLAPYLRRANLVIAPMPFATGMSTKIVSAMAY
                     GKTVLTTPQGAGAIPQRHRQMVVSPLAGFAGRIVELLATRPAVDAAEFPAVCEDFAWA
                     NLTTRLHRRIEACCAPDHNSPAR"
BASE COUNT         2953 a         5973 c         6013 g         2950 t
ORIGIN      
        1 gtgcagggta gcacgatccg cggcgagtgt cgcgcacggg cgggcgttgc gtgctggcct
       61 ggacagggtg gcgcgcgtat cttgcacgag cccggcgccc aatcggaccg atcgccggcc
      121 cagggtaccg gttgccgaac gacggtccgg tttaagccgg cccaggcttg ccgtcgttga
      181 gaatgtcgag gatcacggcg ccgcagggca gcgcatcgcc gctctcgtgc agcggggagg
      241 acacggtatc ttgatgagcg cgatccgccc tccgctcgtt gcgccggtcg agcaggcggt
      301 cgcccacatg catttccacg acgagctcgc ttccgactgc acctctcccc tcctcccctc
      361 gcccagctcc gtcgccaagt attcgtctcg cttcgcccgc cacctgggtg agctggccgg
      421 aggaccgcgc tcgagccatc ggcgaccgca cggctagccg gatcatggag gctccgttcc
      481 agccccgccg gcggttattc ccgatcctgc tggctctcgt ggtggcgtac ctcctgattg
      541 acctgggcgt gctcgcgttc cggacctacg ccgacatgct cgactatcgc gatgcgcgct
      601 atccggacag cgccgttctg ctggtggttg cccacctcgt gaagacgggc cacatctatt
      661 ccgatatcaa tctgccaccg tatctcccct cggtatacgg tccgctgtat tacctcctcc
      721 tgagcttgcc ctaccgactg gcggtcatgc tcggcaccga tcctatggtt tttctgcgca
      781 tcacgacgct gatcttcgct ctcggctgcc tcggcatgat cgtcgcgatc acgcgacgga
      841 tcggcgcgtc gcccggaacc ggcctgctgg ccgcgctcct ggccgtcgaa cggatgtggg
      901 agggaggagc ggcaaccgtc agcctccggc ccgatctcgt gggcctgttt ttcgcgctcc
      961 tgggcgtgtt cctctgcctc gatgaagcgc ggcgcggagt attgaccgcg ggggcggtgt
     1021 ccgtgggcgt ggctctcttg tgcaagcaga ccttcgtcgc ggcgccggtc gcgatcttcc
     1081 tctggttatt gtggcgacgc cgattcaggg cggcagcctg gtgggtcctc gtcaccggcc
     1141 tcacggtggg tggaggctac gcgctgttca tctggcgtga gccgctgagc ctccagctca
     1201 tttccgcgct gagccggccg atccgcgaat atcgcggcgc cctgcaaatc gcgctggacg
     1261 ccggccaccg cttgacggcg cccctctttt ttctggggct gctctacctc tggcgtcatc
     1321 gggacgaccg gaccgttctc ctgatgctct acatcctgct ggcgtggtgc gtcgcgctgg
     1381 cgacgattgt gcaaataggc ggcgccgcga actatttcta tgagccgttg atggcatcgg
     1441 cgccgctggc ggccggggtg ctgatctggc tggatcgcga gcaacggcgg agcactgttc
     1501 ctctttccgt tctcctcgct ctccttcagg tcaccttctt gaagcccagg ctcgagcggg
     1561 cggcggccgc gacccggggg atctacttct acaaggtgca gggacatgcc gagaaaaagg
     1621 cgaggtggga gagatttcgt tcggtgctgg cggggcgacg cctgctggcg agggatccgg
     1681 aaatcgccgc gtggagcagc ccccctgtca tgcccgatcc gttcctgaat cgtgttctcg
     1741 aaatggcggg caagtggagt tccgcaccca tcgtccgcgc cgtggagcag gggagctacg
     1801 aggcggttgt cgtccccgac ggcgctatgg aagagaccga gggatttcgg ggcctgcttc
     1861 cgtggaacct cgacctggtg gcgagcattc gtcgtcgcta cgagctcgtc tgtatgatgg
     1921 accaaaccga tgtgtggttg ccccgcgggc gctccgagct tcgtcaactg ctgccgagcg
     1981 cggattgcgt ggagccgggg cgccaggcag cgccgcggtg aacccgatgc cccgggccgg
     2041 acgcatcccc gcggccccca ccggcgccgg agcgagcccc tgagggacga ggtgttcgag
     2101 ctccaggcga gcctcgagga aagccactgg tggttcctcg ggcggcgctc cattctgcgc
     2161 accctcgtcg ccgcgattct gcctccccgt tccgggggaa ccgtcattga tatcgggtgc
     2221 ggcaccggcg gaaacatcgc cgcgctggcc ggggactatc gctgcgtggg actcgagccc
     2281 gctgctgccg cgctctcgtt ggcgcggcgc cgctatccct ccgtgcggtt cgtggcgggc
     2341 ggcgatccgg cgctggtggc ggaagccgcc acgccgcgga cggtcattct cctcaccgat
     2401 gtgctcgagc acgtcgccga cgactttctg cttttttccc aggtcctcgc gatcatgcca
     2461 gccggttcgc atttgttgct gacggtgccg gcgaatccgg cgctgtggag cccgcacgac
     2521 gtggcgctgg cgcattaccg ccggtacgac gtcgcacggc tccgcctggt ctggcgacag
     2581 ctgccggtcc gggagcgtct ggtgacgcca ttcaacgccc gcctctatcc gctggtgcgg
     2641 ctgcggcgcg cggtggctgc gctctcaggc gcgagcagcg gctcgcgggg caccgatctc
     2701 agcctgccac cggcgctcct caaccggctc ctggcggccg tctttgcagg tgagcgcatt
     2761 cccctggtcc gggcgctcac ccatgccgcc gctccttttc gcagcggggt cagtctgctc
     2821 gcgctgctcg agcgccagcc cggagaagtc gtcgcccgga cgcggccacc tgaggttccc
     2881 gccgacctgc acgcgccgcc ggcggcatga cgaccctgct cgtcatcccc gcctacaacg
     2941 aggcccgccg gctcgatctc caggcctacg ggcaggccct ggcggcgcag gccgggcttc
     3001 aactgctctt tgtggatgac ggcagcaccg atgccaccgt cgcgctgctg cgggccttca
     3061 tggccagcca tccggaccgg atcggcatcc ggcaggaacc gatcaaccgc ggcaaggccg
     3121 aagcggtgcg ccggggcatg ctgcaggcgc tcgactcaga ggcgggtatc gtcggcttct
     3181 gggacgccga cctcgccacg ccgctgggcg agctccccgc tttgattgcg cccctcgagc
     3241 gcgatcccgc gatccaggtc gtcctgggct ctcgcgtgcg cctgctgggc cggcgtatcg
     3301 agcggcgcgc gcagcggcat tacctcggcc gcatcttcgc caccgccgtc tccttcgccc
     3361 tgcgcgctcc catctacgat acgcagtgcg gagccaagct cttccgtccg ggagcgcccc
     3421 tgcgggatgc cctgacggct cctttccgga gccgctggat cttcgacgtc gagctcctgg
     3481 cccggctgga ccgccgaatc ccggggggat tgctgcgtgg cgcatgtgag gtcccgctcc
     3541 gcgagtggac cgacgtggca gggtcgcagg tgcgatggca tgcgttcctc cgcgcgccgt
     3601 tcgacctggc gagcatctat tggcgggaag tgcgttgagc agtccgtccg gcggtcgggg
     3661 ccggccttcg gcgcgcggga acggcgctgc ccgcttgcgg gtggcccagg acaactcctt
     3721 gcggctggct cggcccacga gtctcggtcg ccgtccgacc cgaggatggc cctttccccg
     3781 aatgggggac ggggcggagc tgccggtcgc cctgtcctac ggcgtctccc aggggtaaca
     3841 tttggcacac gaatcgggcg tgctcataga cagaggaatc atgcggaagg gaatcattct
     3901 ggctggcggg tcagggaccc ggcttcatcc gatcacccgc gcggtgagca agcagctcct
     3961 cccgatctat gacaagccgt tggtctatta cccgctgtcg gtgttgatgt tgagcgggat
     4021 tcgcgacatc ctggtgattt cgacgccgcg ggatcttccc gcgttcgaga gcctcctcgg
     4081 gaccggtgag caatggggtc tgtccttctc cttcgcctcg caacccgctc cggccgggat
     4141 cgcgcaggcg tttctcatcg gtcgcagctt tctcggatcg gagagcagct gcctggtgct
     4201 gggggataac gttttttacg gacaaaacct gagccacgcg ctgcaggcgg ccggagcgcg
     4261 ctcgagcgga gcgaccattt tcgggtatcg ggtcgccaat ccaagcgcct atggggtcgt
     4321 cgagctcagc tcgacggggc aaccggtcgg catcgaggaa aaacccgaac gaccccgttc
     4381 gcactacgcc gtgaccggcc tctacttcta cgataatcag gtggtggaca tcgccagcca
     4441 cctccgcccc tcggctcggg gggagctcga gatcaccgac gtcaatcgcc actacctgga
     4501 gcacgggacg ctttcggtcg agctgctggg ccgcggcaac gcgtggctgg atacgggcac
     4561 tcacgaagac atgattcagg cgagtctgtt catcgagacg atcgagcgcc gccagggact
     4621 caaggtggcg tgccccgaag agattgcctg gcggatgggc ttcatcgatg ccgcgcaggt
     4681 cgcccgtctt gccgagccgc tcgagcggtc cgcgtacggc aggtatctcc tggagatcct
     4741 ccgggaggat gcctgaccgt gcgggcgctc cccacggcgc tggatggtgt gctgatcatc
     4801 gagccgcagc tgttcgagga tgagcgggga ttcttcatgg aggtgtggca tctggagaag
     4861 tatcgtgggc tcgggatcga cgccaccttc gtccaggaga atcacagccg gtccgggctg
     4921 ggaaccgtgc gcggcttgca ctatcagctc gtgcggccgc agggcaagct ggtgcgggcg
     4981 gtgcagggca gcgtcttcga cgtcgcggtg gacctgcggc gctcctcacc cggcttcgga
     5041 cggtggacgg gggcaacact gtccgccgaa aaccgccgga tgctctggat tccgccggga
     5101 tttgcccacg gattcgcggt caccagcccg gtggcggacg tcgtgtacct ttgcacggaa
     5161 tactacgccc cggccgggga ccgcaccctt cagtggaatg accccgctct cggcattccg
     5221 tggccgctgg agggagagac tcccctcgtt tcccccaagg acgccggggg aattccactg
     5281 gaccgggcgc cggtcttccc gtgagcgaac ccgaagacac ctcggaggct accgccgccg
     5341 gccggatcag ggtgttgctc accggcgccg gcggccaggt cggctcggcg gtaacgcgcc
     5401 ggagtcccgc cgacgccacc gtggtcgcga tggattcggc aacgctcgac atcacggacg
     5461 aacccgcggt tcgggccgcg gtgggtgccg ccaggcccga cctgattctc aatgccgccg
     5521 ggtataccgc ggtggatcag gcggaggtgg agcccgagcg cgccttcctg gtgaatcggg
     5581 acggcccggc caacctcgcc gcggcggccc gagccaatgg agcccggatc atccatctct
     5641 ccaccgactt cgtcttcgat ggcgcccggg gagaacccta ccctccggag gccccctgcc
     5701 gcccgatcaa cgtctacggc gcgagcaaac gggcgggaga ggaagccgtc caggcgctgg
     5761 ccggggatgc cgcgctggtc gtccgaacgt cctgggtgta cgcggcgcga gggaacaatt
     5821 tcgtcctgac catgctgcgt ctcctgcggg agcagcccga agtccgcgta gtgacggacc
     5881 aggtcgggag tccgacctgg gccgtgagcc tggcggatgc gctctggcgg gcggcacgca
     5941 gggcagatct ttcgggaatc caccactggg ccgatgccgg ggtagcgagc tggtacgacc
     6001 tggccgtcgc gacccaggaa gagagtgtcg ccctgggtct gctgtcccgg agcgttccaa
     6061 tccatgcgat ctccagtcgc gacctgccgc gcccggcgaa acggccaccc tttgctgtgc
     6121 tggatacatc gctcacgacg cacgcgctcg gcgcgcgtcc cgcgcattgg cgggtcaacc
     6181 tgaggctcat gctgagagaa cttcatgcgg cgtaaccttc tcgtgaccgg cggtgcgggg
     6241 ttcatcggcg cgaacttcgt ccagtactgg ctcggggctc atccggacga tcgggtcacc
     6301 gtgctggatg ccctgaccta cgccgggaac gcggccaatc tggcgccggt ggccgagcgg
     6361 cctggattca gcttcgtgcg gggtgacatt cgcgacgccg atctcgccgg ccgcctgctg
     6421 gtcgagcgac ggatcgacac catcgtccac ttcgcggccg agacccacgt tgatcgttcg
     6481 atccacgctc cggatccctt tctccagacc aacgtcatcg gcacccacgt cctgctgaag
     6541 gccgcgcggg acgcgtgggg gacggatggg ggataccccc cgtccgtgag gtttcaccat
     6601 gtctcgaccg atgaagtcta tggatcgttg gcgcccgatg aacccgcatt ctccgagcag
     6661 acgccctacg ctcccaattc accctacgcg gcgagcaagg cggcggccga ccacctggtt
     6721 cgcgcctacc accggacctt cgggctgccg gtgacgacgt ccaactgctc caacaattac
     6781 ggaccctatc agtttccgga gaagctcgtc ccactgctgc tcatcaatgc gctcaccggt
     6841 aaggcgttgc cgatctacgg cgacggcctg aatgtccggg actggctctt cgtggaggac
     6901 cattgccgcg ccatcgaggc tatcctggaa cgggggaccg tgggggagac ctataacatc
     6961 gggggcgggg cggagctccc caatcttcgc ctggtcggcg agctctcccg gttgctcgac
     7021 gaagccttca ggctcgaccc cggattggcc gggtccttcc cggcgagtcc gccggcccgg
     7081 ggagggcaaa cggactccct cgtcacgttc gtcgccgacc gtcccggtca cgaccggcgc
     7141 tacgcgatgg acggcgcaaa gatcgcccgg gagctcggct tccgcccgat ggaaagcctt
     7201 gaatcgggcc tgcgtcggac gatcgcctgg tacctgcagg aggagccgtg gtggcgggcg
     7261 gtgatggacg ggagctaccg ggcctggatc agcacccagt acggaggggg agccgcgtga
     7321 tcgacggcaa gcgggtgatg gtcgtcctgc cggcctacaa cgcggcccgg accctggaac
     7381 agactatcgc cgagatccca tccgggatcg tggatgacat cctgctggtt gatgacgctt
     7441 cgcaggatgc cacggtcgag attgcccggc gcctcgggat cgagcacgtg gtccacccga
     7501 agaatcgcgg ctatggcggc aaccagaaga cgtgctacac cgaggcgctc cgacggggag
     7561 cggacatcgt ggtcatgctc caccccgatt accagtacac gcccaagctc atcggagcga
     7621 tggcgtggct ggccgcttcc aacgaattcg acgtcatcct cggctcccgc attctcggcc
     7681 gcggcgcgct cgccggcggg atgccgatct acaagtacat ctccaaccgc atcctgacgg
     7741 cggtcgagaa cctcctgctc gggatcaagc tttcggagta ccacaccggc taccgcgcgt
     7801 tcacccgcga ggtcctcgag acgctgccct tgcgggaagg ctccgacgac ttcgtcttcg
     7861 acaaccagat gctcgcgcag gcggccgcgt tcggcttccg gatcggcgaa atctcgtgtc
     7921 cgaccaagta ttttcccgag gcatcgtcga tcaacttcgg acgctcggtc gtatacggcc
     7981 tcggggtgct gctgacctcg cttcggttcc gcctgcaccg ctggggcctc cgtcgggatg
     8041 cgctcttcag tcccgagggc ggcaagctgg ggggggcgat cctcccggca ccgaccgagt
     8101 gagccgcgtc aggcggcgac cggaccggcc ccccggttgt cgcgggcacg cagccagagc
     8161 tcgagggtga gaagcgccca gagccgatgg gcgtgattct ggcggcgctc cctgtgctca
     8221 cggatcagcg tcgcgacggg ctcggcgcgg atcagccccc gggcctcgag ggcggagggg
     8281 gccagcactt cctccagaaa ggccgatagc ggtccggact ggcgcagcca gttcttcagc
     8341 gggaccgagt ggccgagctt gtcgcgacgg tggttgacga cgtcgggcag cacgccttcc
     8401 atcgcttcgc ggaacagtcg cttggtccgc tcgatgccct cgagcttgag acgggccggg
     8461 atccgcgctc ccagctcgac caggtcacgg tcgtagaacg gacagcgggc ctccacgccg
     8521 agcccgcgca ggagggcgag ccggctgaag tagtagcccg aggcggtcac atagtcgttg
     8581 tagagatggg gcgagaggtt gtcgtcgggg ccctgatacc cctcgtaggc gtcgatgacc
     8641 gctcggaacg ggtcgcagtc gcgcaccagg gcgagcgccg cgggggtgag cagggcgggg
     8701 tagtcggccg gccggaaata ggtgagccag cggtagggac cgagggcacg ggggacgtcg
     8761 tccgggggca ggatccgctt gaggactgcc cggaggtcgc gcttgcggtc gctgtcgcgt
     8821 accaggcgaa gggcacgaat cagggcgcga taggccaccc ggggcatggg aagccgctcg
     8881 gtgtaccgcg ccagccgctg gatggcgtaa accggatgac ttccccagaa ctcgtcgcct
     8941 ccatcgccgg tgagaacgta cgaggtctcg gcgcgcgccg cgcggccgag gatccacgtt
     9001 cccacgttga tgccgacatt gcagaacggc acctccgcct gcgagaccag ctcgcgctgg
     9061 cccattgcct cggcttcgcc ataggggacc tcggtatggc gggtccccag ttctttcgcc
     9121 agggcgcgcg cgtagtacga ctcgtcgaac gccgggcctt cgcagcggaa cgaataggtg
     9181 tagagcgggc cggcatgagc ccgccggacc agggtcgcga cggcgcttga atccatcccg
     9241 ccggacagca agacacctgg gtccaccccg ccctccaacc ggcgaaccgt tgcacgctcg
     9301 agctgtccgc gaaaggcgag ccgaatctct gcttcgtcgg tgagcgaggg cgccgagaac
     9361 gacagccggt accagcgctc gatggtgagc gtgccccgcg cgggatcgaa gctgagccgc
     9421 gagccgggtg ggacccggag gacgccggcg tcgagagttt cgctcccagg gacgaagcag
     9481 aaggtgagga actcggcgag tccctggccc gaaaggccgt cgtcgaggag ggacgtggcg
     9541 cgcagatccc ggatccgcga agcgaacagg agcgacggtc cccggctcga gtagaacagc
     9601 ggctccatgc cgaatcggtc acggagcaga tgcagccggt cgcatcggcc gtcataccat
     9661 gcgattccga atccgccatc cacccgcccg agcgcctgcc accccatggt gcccagcgct
     9721 tcgagcagcc atcgggcggg atgctctccc agagagccga tctcccgttc gagcagcacc
     9781 ggacgacccg agaggaccag ccacgagccg gtggcaggat cggcggccgc ccccgggcct
     9841 cggtccagcc ccgccacccc ccagggtgct gtcgcggcga ttgccccggc gccctcgagc
     9901 caaccgccgg gatcgcgggg aaacccggcc ggggccgcct cgcgaaggcg gcctgcgagc
     9961 gggccggccg cgccgatcag catcgccacg tctcccagag gagcgacggc ctcacaggta
    10021 tccgtgctcc cggtaccaag cgacggtttt gcgaatcccg gtcggaaggt cgatgcgcgg
    10081 ggcgaagccg agctcccgcc tggctctcgc gatgtcgaac cagcgcatct tgcggaagaa
    10141 gtccacccgg cggcggtaaa gcgggggatt gaggccgaag ggcttgcaga gcgcctcgca
    10201 caccgcgccg gcgagataga ccggccagaa tgggacccgc catcgaggag ccgggacgcc
    10261 gacggcctcg gcgattgtgg cgaccagctc ccgcaaggag accgccggtt cgccggtgag
    10321 gatgtaaatc cggccgaccg ccgccggtag ggtgccgcag cggagaattc cgtccacaag
    10381 gtcgtcaatg tagaccatct gatacttgat gtcgccgcgt ccgatcatca cgaaccggcg
    10441 ccgtgcgacc gcccggacca gcttgaggaa ccggagatcg ccgggcccgt agatcccggc
    10501 gggtcggaag atgaccacgg gcactcggcc gtcgcgcaga aactcctggg ccacctgctc
    10561 gccttcgagc ttggacagct ggtaatggtc gcccggcgcc aatggggagt cttcgttcgc
    10621 gggaggatcc tgcacgtcgc catgtacgcc gaccgtgctg cagtgaacga agcggcgcac
    10681 gcccgcgcgg gcgctcgcct cgagcaggct ccgggtcccg gcgacgttca cctcgaacat
    10741 ctcccgccgg gagacgtttt cgggacggaa aagggccgcg atatggtata ccgtctgaac
    10801 gccctcggcg gcgcgcgcga gcgactccgg gttgcgcaga tcgccggtgg ccagctccac
    10861 gccgggtggg tgggtcgggg cggcccgcgc cgggtcgcgg accagcgccc ggacccgccg
    10921 gccctgctgc acgagtcgag cgcagagatg tccgcccgtg aagccggtgg tacccgtcac
    10981 gagtaccagc ccaccgtcga gcccggcatt cggtccctcc gccggatcga gggccgggga
    11041 ccacgccgct cccatctaga agttcgtgta gatgaacgga gccggagcgg agccgtgcgc
    11101 gaggaccagg agcagtccca cgggcaccag gacgggcttc aagggcaaga gccagagctc
    11161 cttccggacc cggaggaagg cccacgactc cgagatcagg ttcccggcac tcatagccgg
    11221 ctccagaacc cccgggtcat atcactgcgc cggctgcgcc gcccgatcag ggtgtgccga
    11281 agggcgacga gtcctggcgg tactgctgcg ggctgcccac gacctgttgc ggccactcca
    11341 cagtcggtgg atgtcacctc cccgtcgccg cccaggcaat ccaggcggcc cgcaggcccc
    11401 agcccatggc ctccccatca aaccgcgcag gtttccgccc tgcaaacctg ccgagtacga
    11461 tggcgggcca ccagcccgta cacgcgggga ccgatggttg cggcgaacgg gaggtagagc
    11521 agggggacga agggccacag tggcggcaag atccgagcga gttctcggaa ggcgaagaat
    11581 cctcggtaaa cctgtccgcc cggggccact acgcgcatcg cagcccgcgc ctccccggcg
    11641 gatacgccgg gcgcgagcgc agccagccgg cttcgatccg cttcgagatc caggtaggaa
    11701 agccggtgtc ggaaatcgag cgcgtccagg atggtcatgc ttcgaatgca cagcgggcac
    11761 aggccgtcgt agatcacggt ccacttcgcc ggcggagggg tcaccgcccg ggggaatgct
    11821 cgcaggaagg cccgtcgcag gcattcgatg aacgccgcgt acaagaagat gaactgaaag
    11881 aagggtgccc gctgcgcgag gtagatggag acgtgcatgg ccgtcccgcc gagcaggtac
    11941 agcggcacga gccgcggaaa tacgatggcc agccagaagg tgagctcgaa ggcgacggcg
    12001 ccgatcgaaa aaagcgaggc gaccgcggga tggcccacca gggccggcgc cagcggcgct
    12061 ccccacagca ggccgtccat ggccgcgtag tacaccagcg tgtaaccgtt gaaccaggcc
    12121 agcccgccat tcaccagctt cgagaggcct gccgagaggt aggccatccc gagaagccat
    12181 tgtgcgttcc tgagcggcca gcgtgcgaag ccgctctcgg ccggcatcgc cggccgtggc
    12241 tcgaagcgct ggcgctccgc agcgcgccgg agacgaccga gcaatgcgtc cagggacagc
    12301 gccgccccgc tcggtgagac cgcgaggagc gagaggacga tgattggcac cgcttcggtg
    12361 tgatgcacaa ctccgaacgc gtagaagtga gcggtaagga gcgcgtagcc ggcagtgaac
    12421 aggatgaggc tcagccgggt atagaggccg accagggcgg tcacgccgac gacaaggctt
    12481 cccagctgga ccgcgtggag gaacatcggc tcggggcgca ccccccagcc acccaggggc
    12541 agcatcaaca ccttcagggc ggggagcggc aggaattgcg atgggtccac ctgggcatag
    12601 tgaagcacgg cccaaagggg agggaaggcc aggagggccc cgccgacgca gacgatgcgg
    12661 agcagcgcaa gatcggagag ccgcgctggg gcgaagaaat ggcgatcgag cgcgcggaag
    12721 accgagctca atgccgctct ccagacggtg agacgccgcc cctcgcggag tctggtccga
    12781 gcggccaggc gcggaatctc ctccaggcgg tgtcctcgag tctcacccca tgcggtccga
    12841 taaccaggac ttgccgccag agctccagga cacagggatc ccggtggatc gtaaaccggg
    12901 tgaaccgagc gagggtgtca aggagcggcg ccggagtcgg cgacgctgcc aggcgatcca
    12961 gcattggcca gtaccgccac ggctccaagg gaagactatc gatgtggagc gtcacggtgg
    13021 cgccgggcgc gccgcacggg gttgcccgaa gctcctggcg gacgaccgag tcgccctcat
    13081 ggtacgcacc cgaatacatg gggtaatcga tgaagggcca gtaatgggca ttgccccatc
    13141 ccggtggaaa gatcgtccac gcctgggcgc cgaggatcac gacagtggcg gcgaccgcga
    13201 acgcctttcg gacgctcaca tccaccttcc tgggttcgtc atcctgcgca ctcccggaat
    13261 cgcggggacc gtcgccatct tagacggccg gttccggcat tctgaatggg tgtcctaaac
    13321 taatcggtct ccgggcccgt cggccgcaag ggaggcgccg gttctgcttt catcaggtcg
    13381 acgcgcttgc gcagcgaggt ccgggtcgcg gcagtgatct tggcgccggc cgcatcccat
    13441 cgcccgcgga ttgacctggt caacggaggc tgtaaggtgc atgtagggcc accgcaacac
    13501 ccacccggca ttttccggtc accggaccag ccggggatgg cgcatgcccg gatctcggcg
    13561 tttcgccgcg accggcgccg cctcgagcca ctggacccgt tgaccctttc caaacctcgt
    13621 cccgccggat gagtgcgcca gccgcgcgct ctcaaccgct tcgtgcgggc aataggccgt
    13681 cgagaatgcg ggcaacgatc tcggcgctat gctcggagga atatcgctcg agaggtaaag
    13741 ccgcttcccg tggttcggct gttgtcgcgt cgcgagcttg ccaggcccgg tgcagcgcgt
    13801 tccggatggc ggagatgtcc cgggcgggaa ctgccattcc tccggcgtac tggcccatca
    13861 agcgttccag atccgagccc ggctccgtga gagccaggat cggctttccc gcccgcatgc
    13921 actcgtacac cttggcggga atgcggtttc caaccgtgtt cacgacgcag acgtgcgaag
    13981 ccaggatggc ctcgatgcag gctcgatgcg aaaccagggg ctccagccga accacctcag
    14041 gatgggccat gattgcgcgt tggcgcagca gatcatcatc ccgtttgcct atgaagacac
    14101 actcgacctg atcggacaat ccgggatcgt caccgatcca ttcgtcggcg gccctgaaaa
    14161 aacactcgcc gtatcggccg gcttcagaga aatgatttcc cgggtatgtg atggtgaact
    14221 tcgcgcgagg gacccctgcc gctcgagcga acagctcgtc ggcgaatccg gtgggcacga
    14281 cggaaatccc cttctgggcc ccggcgccat gtcgcacgca gagtccgcgc gcgatctcgg
    14341 cgtaggccac ggtgatgtgg tccgcggagc ggacgacgac cccttccagc ttctggtcga
    14401 gcctttcgat gaatcggggg cggccggaca gccaatgcgc gtcactccac ggcagggcga
    14461 aatctgccac ccagggaatg cccagggatc tcgcgatccg gcgcgccaca agatgggacg
    14521 tcggccgcgg agagacggaa aaacagcttc gaatccggtg atccctgccg atccggaggc
    14581 cgcgcctcac cgcggcgggc caccacccga tcttgccgtc aggcaccgcg agctgacttg
    14641 ccaaccgcac catgcgcgct gagagtccgg tgccctgcgg accggcgccg ggctgcggtg
    14701 ggagtgcctc cggaggatcc gacggaaacg gcacgagaag gtgggatgtc gccacggtga
    14761 tccgagggca attcgacggg ccgtcggatg cttcgatgtc gtattcctgg ttccccgaac
    14821 agggttgagc cgtcaggatg atgggctgcc agccgagtgc tggaaggtgc ttcgccagct
    14881 gataggtccg aatgaccccg gagtttctca tgtcgggata gtcatagcag acgatgagca
    14941 cgggaggtga ctgaggacga ccggggcccc tggtcaagga gcctcaaccc tccggaggcg
    15001 ggagcaggcc ggtgccgccg acgcggccgc cggcctccag acctgattcc gcccggacct
    15061 cacaacgcgt agatcttggt ggggaatcca caccagctga gctcgcgcac cactcgaaag
    15121 ccgcgggctc cgaacacctc cccgaaggtc gccttcacgt agatcgccca gatggctcga
    15181 gggaatcgtt gtcgcgagag cacgatgttc tgggccactt gatccagcac gtggccgtcg
    15241 aacgcgaaga aatagaatac gtcggcctcc ggcgggattt cgaaccgggc cgcgtccgcg
    15301 ttgacgacct ggaagtcgaa gggcttcttc ttgcgctcga taaaggtccc gatattcgcc
    15361 tcggcctcgc gacagagctc cggcgagaac tcgacgccga ccactttctt gaagccgaac
    15421 tccgacgcca ccaacaacac ccgtcccttc ccgcatccga agtcaaccaa tgtgctgctc
    15481 gagaacccgc ggccgttcag ctccatcacg gccttgaacg acttcctgat gaggcggaac
    15541 tggctcggcg tagagtacgg gctgcagtgt gtcttgttct cgctccggat ttcggccagc
    15601 tggatggggg tgttgcccgc ggtgttgctg cggtatgccc gttcgtcgag cgtgtccagg
    15661 gccgcgcacc acagcgtgct cagcgcgata cgaagcgagg gaagaaaccc ccgctcgcga
    15721 atgcttcgag cgaacgccct accgtgacgg gccaacgcgc cgctcatcta ccttgtcgcc
    15781 cgtcttctca ccccggcgct ccggcgcgcg ccggctcggc cggctgcgcc cgtcgccgct
    15841 tccgccagtg gaggcgatgg accccgacca ttcgcttcag gatgaacgac aggaacggga
    15901 agacctcctt gcgcaggctc acgaagaaca gacacgacat ccggcaactg gggcagttgt
    15961 cctttaccac cgtcccccga tacgccaggt tcgcctggcc gaaatacagc tcggtggagc
    16021 tcttttcgag gacgttcccg atcgggtgac tgttgtggca gtattgcagc gatccgtcgg
    16081 ggttcagcaa caggccctga tcggcgaacg gacagggtac gccccgcgtc ggcgccccct
    16141 ccaggtgctc cacgacttcc gcgtagtagt aggccagcga atccagcagc gaggactcgg
    16201 cgacctgccg tttcaggaac tcggccagac ggttgcggtc acccgccttg acactgagga
    16261 cgtcgacgac gtccgagttg tggtaatagt cctcggccac ggacgcgatc tgaaacgtga
    16321 tcggcatgtt cagccgttcc gccaggtcct tgagctgttg cagctcatgg atgttcatgg
    16381 aaaaaatcgt cggatcgatg ctcatgttga agggcacttc cttctgcaag cccttcatga
    16441 actcgatgct ctccatgact ttggcatatc cccccttgac gccgcggatc ttctcgtgcg
    16501 tctccccgat cccgtcgagc gacacgccca gggtgagacg aatccggtgt ttggcgcaat
    16561 accgcgcgat gcgtggatac tgctcctgga cactggcgcg gttgatcacg ttggacggaa
    16621 tcagcagctt cttgagccgc ggcatgtgcg cgtgcatcac ttcgacgatt tccggcaggt
    16681 cgtgccgcag cgtcggctcg cctccggcca gaatgatgta ctccaccttc gcgtagacgg
    16741 gatccgcgaa gatggcatcg aattgctccg gactcagcgc atggggagac ttgagctccc
    16801 agatgttgca catcgcgcag cgggtattgc accgcaggtt gacgttgacg tgaagcaccg
    16861 tcggcgcaat gaccttgaaa tgccgggtga cgtgattctc gtacaagtcc cgcatcaccg
    16921 tcgggagttc cctggccacc tcgccgggag tcattgccat ggcggtctct ccattacggg
    16981 acggtgctca gcgggccggc gagttgtgat ccggtgcaca gcacgcctcg atccgccggt
    17041 gcaggcgggt ggtcaggttc gcccacgcaa agtcttcaca caccgccggg aactccgcgg
    17101 catccacggc cggtcgcgtc gccagcagct ccacgatgcg gccggcgaat ccggcgagcg
    17161 gtgacaccac catctggcga tgccgctggg gaatcgcgcc ggcgccctgg ggggtcgtca
    17221 ataccgtctt gccgtacgcc atggcggaca cgatcttggt cgacatgccg gtggcaaacg
    17281 gcatcggcgc gatcaccaga ttcgcccgcc gcagataggg cgccagatcg tccacgaagc
    17341 cggtgtattc cacgtggggt ccgctccact ggcgaggagg ctcggatccg atcagctgaa
    17401 agacagcgtc gggccgggcc ctgagcacct ccggggagat ttcctggacg atcaggcgcg
    17461 cggcctcgcg gttgtggtcc agtcggaagt tgccgacgaa cagcaccacc gccggtgaaa
    17521 gcggcggcgg agggtagaac ggattgcaca cgtccgcatc gaacccctgg gggatcactt
    17581 cgattctgtc gggcccgatc cacttcaggt actcgcggcc gtcactctcg gaaatggcga
    17641 ccaccagttt cgcggcgcgg catgccgccc gctcggccag atagacgtac ggcgccagca
    17701 caccccgccg aaaatccgcc ttgctctgct caagatacat ccggtactcc acgttatgcg
    17761 agcagtagat catgggaatg ccgaagcggc cggcgagcag cctcccgtaa atcgccgcaa
    17821 gcccgtagtc gaccagcagg tagtcgaacg attcagtctg gagcaggcgg ctcgccgccc
    17881 gatacagcg
//
LOCUS       DASYRV010000418         4774 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_4109009, whole genome shotgun sequence.
ACCESSION   DASYRV010000418 DASYRV010000000
VERSION     DASYRV010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4774
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4109009"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..621)
                     /locus_tag="VGQ24_11265"
     CDS             complement(<1..621)
                     /locus_tag="VGQ24_11265"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HEV8455466.1"
                     /translation="MPETVLPASSSGERRRIVPDPAPPLAWDPAGTTAASVTPALWDA
                     LRESVLWAEAEWERVVEHAAGAEEATAHLAQLSAAIRQEAAGVPANTGSIPRNALCRR
                     LLALIRTAFLDRVRRLPPPDPVQLLTVLHAIEVVGQHLEADWSQHFTDRLSSPDGLEL
                     VVEVAHDLRSPLTSILFLAETLQRGRSGPVTPIQERQLGLIYSAAFG"
     gene            complement(621..2144)
                     /locus_tag="VGQ24_11270"
     CDS             complement(621..2144)
                     /locus_tag="VGQ24_11270"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEV8455467.1"
                     /translation="MANPLVQTERKPPSASESSARDPLSIPSEVKASIRVLVVDDERT
                     LRESCASVLQMDGYNVTLIGRGEEALETVRRRKFDIILVDLYMSQVSGLEILQATLEA
                     YKDTIVVVMTGNPSVTSSIEALRAGAWDYLPKPFSATHLQVLIGRASHAVMMSREAQD
                     LRVQLMKQIGHSDKIALIGISPLFRKAVDLARKVAATDASVFISGESGTGKEVIAQFI
                     HQNSRRASRALVPINCAALPEPLLESEMFGHRKGAFTGADRDKPGLLEMANGGTLFLD
                     ELTEMTMPLQAKLLRVIQDGVVRRVGSEQQDAVVDVRFISATNREPQEAVDEGVLRGD
                     LFYRLRVVPIKLPPLRKRPEDIPILANHFLTFYWQRHRQMGDRQPRLSDASIGFLRSR
                     PWRGNVRELQNVIEHVAVLAEPDQVIQPNDIPVYDDSSEWPAENVAPPGLMDEAYHPA
                     KDRVVVQFEKEYLTRLISRAGGNMSKAARLASIDRTTLYRLMDKHEFQRDDTPGSMA"
     gene            complement(2397..3350)
                     /locus_tag="VGQ24_11275"
     CDS             complement(2397..3350)
                     /locus_tag="VGQ24_11275"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8455468.1"
                     /translation="MANRDKAHSAPLVLIANDQEWSARSLESILGPSGYSVVRAYTGQ
                     QALERARTAQPDLIILDAQMPDVHGFEVCRLLRSDPRFSATTPIIITTSGPSGRTQRL
                     EAYRAGAWEFLGQPLDGEALLLKLATFLQCKLEVDSLRDESLLDPGTGLYNMRGLARR
                     AHEIGADAFRRRDALACVVFSPEAEGAGPGEPPDEEVQRIAEQVGQLFKRTGRSSDAI
                     GRLGHSEFAVIAPATSSEGALRLIQRLGGRIESTPIPVRGGERSLKVRAGYCAVPDFA
                     ESPVDAVELLLRATTALRDLKRDGDSEQVRAFEPAPLSYPT"
     gene            4157..>4774
                     /locus_tag="VGQ24_11280"
     CDS             4157..>4774
                     /locus_tag="VGQ24_11280"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HEV8455469.1"
                     /translation="MSGVRSSNPSLPAVTGVFDPSPVRPRYRDWSSAGDRSGTQRGAE
                     WPRRAVNLLLALIATAIMLPVMFLIALLVRLTSRGSVLYTQVRIGLDRREPVIGGQNH
                     RRERDLGGRPFTIYKFRTMRVDAEHGSGAVWAQQRDPRVTPIGRLLRQYRLDELPQLL
                     NVLKGEMNIVGPRPERPTIFAELREHIAEYPLRQRAKPGITGLAQI"
BASE COUNT          839 a         1523 c         1561 g          851 t
ORIGIN      
        1 gccgaacgcg gcgctgtaga tcaaaccgag ctggcgttcc tggattgggg tgaccgggcc
       61 gctgcggccc cgctggaggg tctcggcgag aaacaggatc gaggtgagcg gcgagcgaag
      121 atcgtgcgcc acctccacga ccagctccag gccgtcgggt gacgagagcc ggtcggtgaa
      181 gtgctgggac cagtcggcct ccaggtgctg accgacgacc tcgatggcgt gcagcacggt
      241 cagaagctgg accggatcag gtggcggcag ccttcgcacc cgatccagaa acgccgtccg
      301 aatgagggcc aggagacgcc ggcaaagcgc attgcgggga atcgagccgg tgttggccgg
      361 tacccctgcc gcctcctggc ggatggccgc ggagagctgg gcgagatgcg cggtggcctc
      421 ttcagccccg gccgcgtgtt cgaccacccg ctcccactcg gcctcggccc agaggaccga
      481 ttcccgcagc gcatcccaca gggcaggcgt gaccgaagcc gcggtagttc ccgccggatc
      541 ccaggccagc gggggggccg ggtccggtac aattcggcgg cgctctccgc tgctcgaggc
      601 aggaagaacc gtctcgggca tcacgccatg gatcccgggg tgtcgtctcg ctggaactcg
      661 tgcttgtcca tcaaccggta cagtgtcgtc cggtcgatgc tcgcgaggcg tgcggccttg
      721 gacatgttcc ccccggcccg gctgatcagg cgagtcaggt attctttctc gaactggacc
      781 accacgcgat ccttggcagg atggtaggcc tcgtccatga ggcccggcgg ggccacgttc
      841 tccgccggcc attcggagct atcgtcatag acggggatgt cgttcggctg aatcacctga
      901 tccggctcgg ccaacaccgc gacgtgctcg atcacgtttt gcaactcccg aacgttgccc
      961 cgccagggtc tggaacgcaa gaagccaatg ctcgcgtcgc tgaggcgggg ctgccggtcg
     1021 cccatctgcc ggtgccgctg ccagtagaac gtcaggaagt gattggcaag gatggggata
     1081 tcctcgggcc gctttctcag cggcgggagc ttgatgggga cgacgcgcaa acgatagaac
     1141 aggtcgcccc gcagaacacc ttcgtcgacc gcctcctgcg gctcccggtt ggtggccgag
     1201 atgaaacgca cgtcgacgac cgcatcctgc tgctcgctgc cgaccctccg caccacaccg
     1261 tcctggatca cccgcagcag cttggcctga agcggcatcg tcatctcggt cagctcatcc
     1321 aggaacagcg tcccgccgtt cgccatctcc agcagtccgg gcttgtcccg gtcggccccc
     1381 gtgaacgcac ctttgcggtg gccgaacatc tcggactcca gcagcggctc aggcagcgcc
     1441 gcgcagttga tcggcaccag cgcccggctg gctcgccggc tgttctgatg aatgaactgg
     1501 gcgatgactt ccttgccggt tccactctcg ccgctgatga acacggacgc gtctgtggct
     1561 gcgaccttcc gggccaggtc aacggccttc cggaataagg gcgaaatgcc aatcagcgcg
     1621 atcttgtcgc tgtggccgat ctgcttcatg agctgcacgc gcagatcctg cgcctcgcgc
     1681 gacatcatta ccgcgtgcga ggcccgtccg atcagcacct gcagatgggt ggccgagaac
     1741 ggcttcggga ggtagtccca ggcgccggcg cgcagggctt cgatgctgct ggtgacactg
     1801 ggatttccgg tcatgaccac aacgatggtg tccttgtagg cctccagtgt ggcctgaagg
     1861 atctcaaggc cggagacctg ggacatgtac aggtcgacca ggatgatgtc gaacttccgg
     1921 cgccggaccg tctcgagcgc ctcttcgccc cggccgatca gcgtcacatt gtacccgtcc
     1981 atctggagga cgctcgcgca actctcccgg agcgtgcgct catcgtcgac caccaacact
     2041 cggatgctgg ctttcacttc actgggaatg gacagcggat cgcgagcact gctctcggac
     2101 gcggacggcg gtttccgctc cgtctggacc aaaggattgg ccattcctgc aactccaggg
     2161 gggagaccgc ggcgcggtcg gtttaactca gactcggctc ggctgagccg ggtaactggg
     2221 cgacaaaaga ccgacatccg ggcggactac gtggttcccc cggagaaaca gcaggagtaa
     2281 cgtttctacc acagagtgag gcagaagtca agcaggtgag gatatgcagc aacatacata
     2341 atccctaagt tggccccatt tcgtaggttc tgcactacac ctgtggcggc ccaatgtcag
     2401 gtggggtagg agaggggtgc cggttcgaac gcccggacct gctccgagtc accgtcgcgc
     2461 ttcaagtcgc gcagcgcggt cgtggccctg aggaggagtt ccacggcgtc gaccggagac
     2521 tccgcgaagt cggggacggc gcagtagccg gcccgtacct tgagagaccg ctcgccacca
     2581 cgcactggaa tgggagttga ttcgatcctg ccgccgagac gctggatcag acgcaaggcg
     2641 ccctcgctgg acgtagccgg agcgatcacg gcgaactccg agtgacccag cctgccgata
     2701 gcgtcggagg agcggccggt gcgcttgaac agttggccca cctgctcggc aatgcgctga
     2761 acttcttcat cgggcggctc gcccggcccg gctccttcgg cctcgggcga aaagaccacg
     2821 caggcaaggg cgtcgcgccg gcggaacgcg tcggcgccga tctcatgcgc ccggcgcgcc
     2881 agcccccgca tgttgtacag gccggtaccg ggatcgagca ggctctcatc ccgcaggcta
     2941 tccacttcga gtttgcactg gaggaaggtg gccagtttga ggagaagcgc ttcgccgtcg
     3001 agcggctggc ccaggaactc ccaggcaccg gcacgatacg cctcgagccg ctgggtacga
     3061 cctgaaggtc ctgatgtcgt gatgatgata ggagtcgtgg cgctgaatcg gggatcactg
     3121 cgcaggaggc gacagacctc gaacccgtgt acgtcaggca tctgggcgtc gaggatgatc
     3181 agatcgggct gggcggtccg ggcccgttcc aaggcctgct ggccggtata ggctcggacg
     3241 accgaatagc cgctgggtcc gagaatgctc tccagcgatc gggctgacca ctcctgatcg
     3301 ttagcgatga ggacgagagg cgcggagtga gccttgtctc gatttgccat gcgtctttag
     3361 ccagatggat gaggagcaga taaccggagt ttccccgctg agttgcagga ctcgtgcgcc
     3421 ttcgcacaaa accagtaaca gtctacgaca cattaatttg agacccgccg ggtggaggct
     3481 cggatgctct gatcggtgga agcgcgccac agtttggatg ctggaatgcc acgctacttg
     3541 acaccgtgca ggttgtggca attcagccgt ggtcgctgtg gttccgcagc aacgcctcgg
     3601 cgcgtatggg agcgtgcctc acaccctcgg cctgacgcac aacttactac aatctaggag
     3661 cttgcatggt gcgaggcggc cccggagcgg gcccgtgccg ccgctcgaat ttgcggctcc
     3721 atccttgaag gagagtcatt cctatcccga agttcagccg aactctactg gaagcaatct
     3781 gacggatggc catcgaaccg ctgcccgaaa cgaagccgcc atgcgaagat accagccctg
     3841 atcagccggc ccgtggcctg accgacccta cattgtcgga tgcggcggag cttccggtgg
     3901 agctctccga attcagccaa cgcttggcca gtttcggcct gggtgaggtt ccggatcccc
     3961 tcctgacgga ggcccgcccg cctgcaaagc gccgttcgcg tacctgagct cactacggag
     4021 tcctggcgag tgagtgagtc ggatcacagg gaactttttc agcgtgtatt aaggtgcttt
     4081 ccatcctgcc gcgagtcatc gcccaggaat gctgccgttc atcctaaggt ctttgagtcc
     4141 aattatggga attggcatgt ccggcgtacg tagcagcaat ccgtcgcttc ccgccgtcac
     4201 gggtgtcttc gacccgtcac ccgtgcgccc gcgttaccga gattggagta gcgcgggcga
     4261 tagaagtggc acgcagcgcg gagcggagtg gccgcggcgg gctgtgaact tgttgctggc
     4321 gctgatcgcc accgcgatca tgctgccggt catgtttctc attgcgcttt tggtgcgtct
     4381 gacctcccgg ggctcggtgc tctacaccca ggtgcggatc ggtctggatc ggcgtgagcc
     4441 cgtgatcggc ggccagaacc accggcggga acgcgatctc ggcgggcggc cgttcacgat
     4501 ttacaagttc cgcaccatgc gggtggacgc cgagcacggc agcggggcgg tgtgggccca
     4561 gcagcgcgat cctcgggtca ccccgatcgg ccggctgctg cgccagtacc ggctggatga
     4621 gctgccccag ctcctcaacg tgctcaaggg cgagatgaac atcgtggggc cccgccccga
     4681 gcggcccacc atctttgccg agctgcgcga gcacattgcc gaatatcccc tgcgccagcg
     4741 ggccaagccg gggatcaccg ggctggccca gatc
//
LOCUS       DASYRV010000419         4429 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3694568, whole genome shotgun sequence.
ACCESSION   DASYRV010000419 DASYRV010000000
VERSION     DASYRV010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4429
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3694568"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2309
                     /locus_tag="VGQ24_11285"
     CDS             <1..2309
                     /locus_tag="VGQ24_11285"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEV8455470.1"
                     /translation="GMATVYLARDLRHGRSVALKLLRPELAAALGSERFQREIHLAAG
                     LQHPNILTVLDSGGSGSLLWFTMPFVQGESLRTHLDRERQLPVDEAVRIAREVADALG
                     CAHSRGIVHRDIKPGNILLSGGHALVTDFGIARSVDDQTADRLTESGMIVGTPAYMSP
                     EQASGERNLDSRTDIYALGCVLYEMLAGEPPFTGPTAQSIAAKRLTDPVPAVSRVRDT
                     VPAGVERALARAMAKVPADRYASATDFADALRTGLSDQPGVRPRKRSVFRWPSAGAAV
                     LLLLAGVFYLYRGSGPTEPAGPIPLAVLPFRTFGAAGDSSVLAIGIPDAIITRLAGVR
                     QMRLRPTSAVLRYAGKDADPGEIGRALAVRYLLTGTVQAAADRLRVSVQLVRAGDGSP
                     LWGSHYDLARQDLLTLQDSIAERVSASLAVRLSTDEHDRLYRRYTANPAAYEWYLRGR
                     AQLAHVSEDGTRAALQAFARALALDSNYALARAGLAMASADMHLRFASGPEVKMWGER
                     ANEEAARALALDPNLAEAHLAKAAVSRKTDFDWEQTIEESGRALALNPSLDVAHYFRE
                     AAFYHLGLFDLAEREDREALGLDPADQVEQLRTRGVVAFLQGRYPEAVRNLELARRSS
                     SRAYTDSYLSQAYYYSGDSTRAIATLDSLSQTSSAPAAARARAALASFLAHRGEQEEA
                     EALIALVLGKGGYVDHHVAYSLGAAYAQLGQPEQAAKWLAEAVNGFPCYPWFERDPLL
                     DPVRQDPRVNRVLTQLRQSWEAAKSRYS"
     gene            complement(2380..3702)
                     /locus_tag="VGQ24_11290"
     CDS             complement(2380..3702)
                     /locus_tag="VGQ24_11290"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEV8455471.1"
                     /translation="MRGDVIVVGGGVAGLAAAGRLAEAGRRVTLLEARPRLGGRVHTV
                     LDPAHGHPIELGAEFVQGESTDLLQMLHRARLAVQEVPERHQRGGGRGTKQSVDVESL
                     AGRLLGSVLPTIGDVPVAQAIRQVARVDFTSDEIEALADYLEGFHAADLERFGTAALA
                     ENHAAVSRDGPHVVRLEGGYGRLVSALRSRLDPDLVRVQTETIVTGVRWRTGKVVVEA
                     RLPNEDTIELTGSQAILTVPLGVLKAGKELEGAVDLDPLPTGWHESLGALEMGMARRV
                     DLRFDNAWWMDPNRPPSTFVHGRDQPFPVWWTSVPPTLPYLTGWVGGPRAQVMAGRTQ
                     DEVARLALQSAASIFGRTGSTLESGVRAVYTHDWSTDSFSRGAYSYGGVGAIAAREIL
                     RGPVAGTLFLAGEALAGDGLNGTVSGALTSGLQAAASLLDVRRATLHR"
     gene            complement(3727..>4429)
                     /locus_tag="VGQ24_11295"
     CDS             complement(3727..>4429)
                     /locus_tag="VGQ24_11295"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEV8455472.1"
                     /translation="NQTLLIRGIPFEVIGVLSEKGSAGGFGNPDEQILIPLNTARYRV
                     FGSNRVRSFSVQVADSVPIEQGMVDLERVLRREHKIRPGGENDFTIRNQQDVLATQEQ
                     ATQVFTSLLASIAAVSLLVGGIGIMNIMLVSVTERTREIGIRKALGATRLNILMQFLI
                     EALTLCLLGGVIGILVGVGTAVLLARVMQWNTLISPMAVAIAFAFSAAVGLFFGIWPA
                     RRASRLDPIVALRYE"
BASE COUNT          752 a         1503 c         1431 g          743 t
ORIGIN      
        1 gcgggatggc gacggtatac ctcgcccggg atctgcgtca tggccgctcc gtagccctga
       61 agctgttgcg ccctgagctg gcagcggcgc tcggatccga acgcttccag cgggaaatcc
      121 atctcgccgc cggcctgcaa caccccaaca tcctgacggt gctcgactcg ggcggatcag
      181 ggagtctgct gtggttcacc atgccatttg ttcagggaga gtcgcttcgc acccacctcg
      241 atcgcgagcg acagctaccg gtcgacgagg cagtacggat tgcgcgcgag gtagcggacg
      301 cgctgggttg cgcccatagt cggggcatcg tgcaccggga catcaagccg gggaatatcc
      361 tgctctccgg cggccatgcg ctggtgaccg acttcgggat cgcccgctcg gtcgacgacc
      421 agactgcgga ccggctcacc gagagcggga tgatagtagg aactcctgcc tacatgagcc
      481 cggagcaggc cagcggtgag cggaatctcg atagccgaac cgacatctac gcgctcggct
      541 gcgtgctcta cgagatgctc gccggtgagc cgccgtttac cggcccaacc gctcagtcta
      601 tcgccgcgaa gcggctcacc gatcccgtgc ctgccgtcag tcgggtgcgg gatactgtgc
      661 cggccggcgt cgaacgcgcg ctcgcgcggg cgatggccaa ggtgccggcg gatcggtatg
      721 ccagcgccac ggactttgcc gatgccctcc gcacagggct ttcggaccaa ccgggcgtcc
      781 ggcctcgtaa acgctccgtg ttccggtggc cgagtgccgg ggcggcggtg ctcctgctgc
      841 tcgcgggtgt gttctatctc taccgcggca gcggccccac ggagcctgct gggccgattc
      901 ccctcgccgt tctccccttt cggaccttcg gcgcggcggg cgactcgagc gttttggcga
      961 tcggcattcc cgacgccatc atcacccgtc tcgccggcgt acggcaaatg cgcctccgtc
     1021 ccaccagcgc ggtcctccga tatgcgggta aggatgccga cccaggcgag attgggcggg
     1081 cgctcgcggt acgctatctc ctcaccggca ccgtacaggc cgcggccgat cggcttcggg
     1141 tgagcgttca gctggtgcgc gccggggacg gctcgccgct atggggatct cactacgacc
     1201 tcgcccgcca ggacctgctc acactgcagg actcgatcgc agagcgggtg agcgcgagcc
     1261 tagcggtgcg cctgagcacc gacgagcacg accgactcta ccggcggtac actgccaacc
     1321 ccgccgcata tgagtggtat ctcaggggcc gggctcagct ggctcacgta tcggaagacg
     1381 gcaccagggc cgcgctccag gcgtttgcgc gggcgctcgc gctggactcg aattacgcac
     1441 tggcccgggc gggccttgcc atggcgagcg cggacatgca tctgcgcttt gcgtcgggac
     1501 cggaggtcaa gatgtggggg gagcgggcca acgaggaggc agcgcgcgcc ctcgctctcg
     1561 accccaacct ggctgaggca catctggcca aggcggcggt gagccggaag accgatttcg
     1621 attgggaaca aaccatcgag gaaagcgggc gcgccctggc gctcaacccg agcctcgatg
     1681 tggcccatta cttccgggag gccgcgttct accatctcgg gctcttcgat ctggccgagc
     1741 gggaagaccg ggaggctctc ggtctggatc ccgcggatca ggtggaacag ctcagaaccc
     1801 ggggagtcgt ggcgtttctc cagggccgat atcccgaggc cgtaagaaac ctcgaattag
     1861 ctcgccgaag cagcagccgg gcgtacaccg actcctacct gtcgcaggct tactactaca
     1921 gcggcgattc cacccgggcg attgcgacgc tggactccct cagccagacg agctcggcac
     1981 cggcggcggc ccgggctcgc gccgccctgg ccagtttcct ggcccacagg ggagagcagg
     2041 aagaagcgga agcgttgatt gctttggtcc tcggtaaggg cggctatgtc gaccaccacg
     2101 tggcctacag cctgggggcc gcctacgccc aattgggtca gccagagcag gcggccaagt
     2161 ggctcgccga agcggtcaac ggctttccct gttatccctg gttcgagcgg gatccgctgc
     2221 tcgacccggt gcgccaggat ccccgggtca accgggtact gacgcaactc cgtcagtcgt
     2281 gggaggctgc caagagccgc tattcgtaac gatttcgggc gctgacctga gggtccgccc
     2341 gctctgcggg gctactcgcc agagtaacga atccactgct taacggtgga gtgtcgcccg
     2401 gcgcacatcg agcagcgagg ccgcggcctg caggccgctg gtgagggcac ccgacactgt
     2461 cccgttcagt ccatcgccgg ccagtgcctc gccagccagg aacagggttc cagccaccgg
     2521 cccgcgcaaa atttctctgg ctgcgatggc gccgactccg ccgtagctgt atgccccccg
     2581 ggaaaaagaa tcggtcgacc agtcgtgcgt gtagaccgcc cgaaccccgg actcgagcgt
     2641 actacccgtc cggccgaaga tgcttgcggc cgactggagt gccagtcgag ccacctcatc
     2701 ttgagtccgt ccggccatca cctgggctcg aggtccgccg acccagccgg tgagataagg
     2761 cagcgtcggc ggtacgctgg tccaccaaac cggaaacggc tggtccctcc catggacgaa
     2821 cgtcgacgga gggcgattcg gatccatcca ccacgcgttg tcgaaccgaa gatcgacccg
     2881 ccgagccatt cccatttcca atgcaccgag cgactcgtgc cagcccgtgg gcagaggatc
     2941 gaggtccacg gccccctcca gctctttgcc cgctttcaag acgccgaggg gaactgtcag
     3001 aatcgcctgg gagccggtga gctcgatcgt atcctcattc gggagtcggg cttcgaccac
     3061 aaccttgcct gtccgccagc ggaccccagt gacaatggtt tccgtctgca cccgcaccag
     3121 atccggatcg agccgtgacc tgagcgcgga caccagtcgg ccgtagcctc cctcgagccg
     3181 gaccacgtgc ggtccatccc tcgacactgc cgcgtgattt tccgccagag cggcagttcc
     3241 gaagcgctcg aggtcggccg catggaatcc ctcgaggtag tcggccaggg cttcgatctc
     3301 gtcggacgtg aaatcgacgc gagccacctg gcggatcgcc tgggcgaccg ggacgtctcc
     3361 tatcgtgggg aggaccgatc caagaagccg gccggcgagc gactccacat cgacagactg
     3421 ctttgtccca cgcccgccgc ctcgctggtg ccgctcaggc acttcctgta cagcgaggcg
     3481 ggcacgatga agcatctgga gcaggtccgt cgactcgcct tggacgaact ccgcgccgag
     3541 ctctatcgga tggccgtgag caggatcaag caccgtgtga acccggccgc caagccgagg
     3601 gcgggcttca aggagcgtca cccgccggcc ggcttcggcc aggcgaccgg ccgcggccag
     3661 acccgccact ccgccgccaa ccacgataac atcgccgcgc ataccggttt tcttgtccct
     3721 gggtttctac tcgtatcgga gggctacgat ggggtccagc ctcgaggcgc ggcgcgcggg
     3781 ccagatgccg aagaagagtc ccacggccgc gctgaaggca aaggcaatag ccactgccat
     3841 cggcgagatc agggtgttcc actgcatcac cctggcgagc aggactgcgg tgccgacgcc
     3901 aaccaggata ccgatcacac caccgagcag gcacagcgtc agcgcttcga tgagaaactg
     3961 catcaggatg ttcagccggg ttgcgcccag cgccttgcgt attccgatct ctcgtgtccg
     4021 ttccgttacc gataccagca tgatgttcat gatgccgatc ccgcccacca gcaggctgac
     4081 cgcggcgatg ctggcgagca gactggtgaa cacttgggtg gcctgctcct gggtggcgag
     4141 tacatcctgc tggttgcgga tggtgaagtc gttctcaccg cccggccgga tcttgtgctc
     4201 ccgcctgagg acccgctcca gatccaccat cccctgttcg atcggtacgc tgtcggcgac
     4261 ttgcaccgag aaggaccgca cccggttgct cccgaagacc cggtagcgcg ccgtgttcag
     4321 cgggatgagg atctgctcgt cggggttgcc aaaccctccg gcagagcctt tctcgctgag
     4381 gacgccgatt acctcgaagg ggattccccg gatcaacagg gtctggttg
//
LOCUS       DASYRV010000420         5898 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3826218, whole genome shotgun sequence.
ACCESSION   DASYRV010000420 DASYRV010000000
VERSION     DASYRV010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5898
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3826218"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..270)
                     /locus_tag="VGQ24_11300"
     CDS             complement(<1..270)
                     /locus_tag="VGQ24_11300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455473.1"
                     /translation="MRGDHRDHHVVKFAVLLLAQALVHRPSADDGVHGVPARLSRTWD
                     WLPARQRENSPGCRAPGQMPEHQHPGGEDQAAGEEGAGDGWEHDDE"
     gene            444..1016
                     /locus_tag="VGQ24_11305"
     CDS             444..1016
                     /locus_tag="VGQ24_11305"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEV8455474.1"
                     /translation="MDQIEVEGLRIAYERVGGGPPLVLVHGFVGDGQSTWSSQIRELS
                     DDFTVVARDAPGAGHSSEPPDWFRLPDYADCLAAFVRALGLIQPHLVGLSFGGALILE
                     LFRRHPGIPRTLVLASAYARWAGFLEAEEVDARLRLSLRLAELPPTQFADAMISSMFS
                     KSAPREAVAQFAASVRAFSPGGFRAMAFLG"
     gene            complement(1529..1963)
                     /locus_tag="VGQ24_11310"
     CDS             complement(1529..1963)
                     /locus_tag="VGQ24_11310"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEV8455475.1"
                     /translation="MRISDVLRVKGGQVVTVTPDTDVRHLLTVLAEHRIGAVVVSHNG
                     TSVDGIASERDIVRALAERGATVLSEAITAIYTAEVHTVTPETPLEEVMHMMTEHRVR
                     HLPVVVDGGLRGIVSIGDVVKNRIDELESERAALTDYITGTR"
     gene            3415..3696
                     /locus_tag="VGQ24_11315"
     CDS             3415..3696
                     /locus_tag="VGQ24_11315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455476.1"
                     /translation="MRHRGYLKTLYHRHVMKWGGYRNPLAKKKAIIVVAHSMLVIVWH
                     VLATGKPYHELGEDYLTNRRDPGKETRRLIAKLEALGQSHPAGSRRLTT"
     gene            complement(4141..4395)
                     /locus_tag="VGQ24_11320"
     CDS             complement(4141..4395)
                     /locus_tag="VGQ24_11320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455477.1"
                     /translation="MSSQKRCTRSASPAASWPDPAQYGQRDRAAGPTDVDHLDPLQAK
                     ARQHHLEGLPMADSTGLTGAPPRQVANIVTAGRLLSAAPG"
     gene            complement(4555..4731)
                     /locus_tag="VGQ24_11325"
     CDS             complement(4555..4731)
                     /locus_tag="VGQ24_11325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455478.1"
                     /translation="MARSILVIVWHLLADPTARYHDLGADYHATKTDKTRQVRNHVRH
                     LQALGFTITLTEAA"
     gene            4745..5026
                     /locus_tag="VGQ24_11330"
     CDS             4745..5026
                     /locus_tag="VGQ24_11330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455479.1"
                     /translation="MGFTSSFDDAPVAFAEEGVGAGGAAGGLAEDTFEVGVALAGLPG
                     AVFGCGLDGARAEFGPGHQVGGGGEPAHLQAHLGDDHLGGEPVDAGDLV"
     gene            complement(5068..5427)
                     /locus_tag="VGQ24_11335"
     CDS             complement(5068..5427)
                     /locus_tag="VGQ24_11335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455480.1"
                     /translation="MLAGLARARMKAKHAALVEALTGRFDEHHAELARKLLDQIDGLT
                     TQIEMLTARIDQLIAAVPAAAAPTAPTGPATSTGEGEGEGTGNGAGQAKRGAQDASGG
                     GEQDARVLSALERRGGH"
     gene            complement(5474..>5898)
                     /locus_tag="VGQ24_11340"
     CDS             complement(5474..>5898)
                     /locus_tag="VGQ24_11340"
                     /inference="COORDINATES: protein motif:HMM:NF013698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEV8455481.1"
                     /translation="KPERKPEVICDEEHELLIERVCAVDVAKASGMVCVRMPHESRPG
                     RRASVAREVDATTRAILELGDHLVCQQVEKVTVESTSDYWRIWFYLLEARGLDVQLVN
                     SRDIKNVPGRAKTDKLDSVWQAKLTEKGMLRPSFVPPK"
BASE COUNT          934 a         1943 c         1975 g         1046 t
ORIGIN      
        1 ttcgtcatcg tgctcccagc cgtctccggc cccttcctcg ccggccgcct ggtcctcacc
       61 gcctggatgc tgatgttccg gcatttggcc tggcgctcta cagccgggcg agttctcccg
      121 ctgccgagcg ggcaaccagt cccatgtccg gctgagcctg gcaggcacac catgtacgcc
      181 gtcatcggcc gatggacgat ggaccagcgc ctgcgcgagg agcaggaccg cgaacttcac
      241 gacgtgatgg tcccgatggt cacctctcat ccgagcttca tcgccgggca ctggacccga
      301 gactcgagcc gtgttgccgg tccaggccgt cgccgtcgag gggttccgtg tgcgattgca
      361 cggagagcgg catgagtgga ctctgctacc ggtgtgagac cctgacgttg atgtgctcgt
      421 gaaccgggcg gggctgagcc gcgatggatc agatcgaggt cgaggggctg cggatagcct
      481 acgagcgggt gggcggcggg ccgccgctgg tgctggtaca cggattcgtc ggagatggcc
      541 agtcaacctg gtccagtcag atccgcgaac tgtccgacga cttcacggtc gtggcccggg
      601 acgcacctgg cgccggccac tcatcagagc cgcccgactg gtttcggctg ccggactacg
      661 ctgactgcct cgcagcattc gtgcgagccc tcgggttgat ccagccccac ctggtgggat
      721 tgtcattcgg tggggcactg atcctggagc tgtttcgaag gcatccgggc atcccgcgga
      781 cgcttgtgct cgctagcgcg tatgcgaggt gggccgggtt cttggaagcc gaggaggtcg
      841 acgcgaggct gcgactttcc ctccggttgg ccgaactccc gcctacgcag tttgcagacg
      901 cgatgatctc gtcgatgttt tcaaaatcgg cgcccaggga agccgtggcc caatttgccg
      961 ccagcgtgcg tgcgttcagc ccagggggct ttcgggccat ggcgttcctc ggctgaggcg
     1021 gacgtgcgac gtacttgccg gcctcaacgt gcccaccctg ttgttgtacg gcgaccaaga
     1081 tgtacgcgcc cccttgagga tcgcaaacgc ccttcactcc tccatacctc agtcccggct
     1141 cgttgtaatg cccggtgtcg gccatgccag ctccgtagaa gcaccagagc tattcagtcg
     1201 agaagtccgc gagtttctcc ggtcgaccga gacctgatac cttggcgaaa ggacctgaat
     1261 gctgtacgga cgagacgtcc ggacatcggc acgaccggac gcctcggccc cggcgcggcg
     1321 tgcccggtgc ggccgtcgac gattgcgcag agtcacgagg tacgcaccac tgtcgggccg
     1381 atcagcccgt gtgacgctgt gtcaccgtgt cccgatgcgg ctcccagacg aagggcgatc
     1441 tccggacgat cgccccgcgg catgcggatg ttgccccagc gaggctctcg agagatcgtt
     1501 ggaggcgtct gcaggctgag ccgacgcgct agcgggtgcc tgtgatgtag tcggtcaatg
     1561 cggctcgctc gctttcgagc tcgtcgatac ggttcttcac cacgtcgccg atgctcacta
     1621 tccctcgcaa gccgccgtca accacgaccg gcaggtgccg gacccggtgc tcggtcatca
     1681 tgtgcatgac ctcctcgagt ggcgtctctg gcgtaaccgt gtgcacctcg gctgtgtaga
     1741 tagccgtgat cgcctcagac agcaccgtgg cgccgcgctc ggccaacgct cgaacgatgt
     1801 cgcgctcact ggcgattccg tcgaccgagg tgccgttgtg agagacgacg acagcaccga
     1861 ttcggtgttc ggcgagcacc gtgagaaggt gccgcacgtc cgtgtccggg gtgacggtga
     1921 cgacctgccc gcccttgacg cgaagtacat cgctgatacg catctagccc tcccagacgg
     1981 actgatcgtg tgcccaccgg cccccccaga ctattactcc aacccgctat tgccgggtag
     2041 atgatcggcg gcggatgggc gcgtacacag gtcgtggctc gcggcgctcg acatgccatc
     2101 cagcgctctg caccacgatc tgatcgtctg gttcggccac ttagtgacgc gatccgccag
     2161 cgaggccatc gtaggcagcg atggggcgcg ctaccacccc cccgtcggcg atctcgggct
     2221 gacggagtag ggaagagcgc ctgattatac accgcctcct cgaggccgaa ccgcggtata
     2281 cccaccatgc gctcaccgcg acgtaggcca gggagcctcc accaccaagt ccgctaccgg
     2341 tcggcggcac gaacggaccg gtcgagaaca ctctcctgct gcccttcaga cgcgttttgg
     2401 caatgatggc gctagatagg cacgaggccg aggagatgca tacatggctc gttgcgggat
     2461 cgagtcggcc ggtccagcgg caggccgaag gatttggctg agcgcttgac cacacgtggt
     2521 ctattcaggg ttgccagtcg gcgacgctca gcgatcgcga gacggttcag agatggctgc
     2581 acgagctgca tcaaccgcgc gaccagcggg tacttctctt ccggccgtgg ggcacggtcg
     2641 tgcggtcgcc gacggtcgtc acccggtgaa ggtgttcctg tccgacggcg agaagtcgtg
     2701 gtttgcggcc gtgccagggg tcggcgacga tagggatctg acgccccaac atgttgagca
     2761 tgtcctgctg gatgctctga ccgcgtcaag tcctctggat tggccagaat ggcgatacct
     2821 gatttgagga gactcaacca gggaaccagg ggtcgaaggg gatgaccttt acatcgccag
     2881 atgagtgtca tgcgcaggga gcgctcgttt gtgaggcata ccgcgcccgg cggagggcaa
     2941 ctccgccggc aactccggcg agagtctctc gtagacttcc tcgaccttgc tgattaggtc
     3001 gtcaagtccc atagccggat ctagaagatg aggcggcgag cctccgcgtg cgcatggtga
     3061 actctcccca gctcaccagg agcaaccgtg aggcgccaaa gttcgcgagc gggcacgtcc
     3121 cgcccgcgaa tacgaggccc gctactttgg cttaacccca gcccaacgag gtggctggag
     3181 ccaacacctg aagtctccac aaaaatccgg ggcggttcac ttttcactga tgtaccaccc
     3241 atactatgcg acggggtgaa gcgccgggct aacgacgggc cgcggatcgc tgcagcgatg
     3301 ggcggggcgc ccaccacggc tcgggctgac gcgcggctaa caggagcagc gcaaacccca
     3361 ggatcgcgta caggttgccg ggaatctgct gccagatcgt ccagctccgt agccgtgcga
     3421 catcgcggct acctcaagac gctctaccac cggcacgtca tgaaatgggg cggctaccgc
     3481 aacccgctcg cgaaaaagaa ggcgatcatc gtggtcgccc actcgatgct cgtcatcgtc
     3541 tggcacgtcc tggccaccgg caagccctac cacgagctcg gcgaggacta cctcaccaac
     3601 cgccgcgacc cgggcaagga gaccaggcgc ctgatcgcca agcttgaggc cctcggccaa
     3661 agtcaccctg caggcagccg ccgcctgaca acctgaccgc ccctgccacc ttcacccggc
     3721 tccgcaagct ccgccgggtg ctgtcgcctg cccggctgag ggccattcac gtatcagcaa
     3781 gcactcaact gtctaccgag caggtcgagc ctcacccgct cggcatcccg ttgttcccgg
     3841 gaactacctg gatgcgggct atggtagatc gctcggttca cgacggcttc ggcgagagtt
     3901 cggccgccgt gagtctcggc ggagggcgcg gaatcagccg tcgttcctga atcagcacgt
     3961 gccgggcgca ccaactcggt cacgatcttc ccgtctggac ccctggtagc ggcggtcgcg
     4021 ccggcgcgtt ccagcgctct tctatggtgg tccggtgacg gtgagaggct cgacgccccg
     4081 gctctcgccg gaagggagag gtgacagttg tcgagccgga gcggcgctga gtgctggtga
     4141 tcagccaggt gcggcgctga gcagccgacc ggcggtgacg atgttggcca cctgccgggg
     4201 cggcgcgccg gtcaggccgg tcgaatctgc cataggcagt ccttcgaggt gatgctggcg
     4261 ggccttggcc tggagcggat cgaggtgatc gacgtcggta ggtccggcgg cgcggtcccg
     4321 ctggccgtat tgggctgggt cgggccagga cgcggcaggt gaggccgatc gcgtgcaacg
     4381 cttctgcgag ctcaccgcgc gcgagctcgc cggcgagtgc cggccagcgc gcgcaccccg
     4441 gcgctgccgg ccaccgtgac ggcctgagcg gccagccggg tcagggcctt cgggcaccgc
     4501 gcatccagcc gcgcaccgtg cggaagtcgg ggggtcgctc ggggcggtat cgggttaggc
     4561 ggcctcggtg agggtgatgg tgaagccgag tgcttgaagg tggcggacgt ggttgcggac
     4621 ctggcgggtc ttgtctgtct tggtggcgtg gtagtcggcg ccgaggtcgt ggtagcgggc
     4681 ggtggggtcg gcgagcaggt gccagacgat gacgaggatg gaccgtgcca cgccaacgag
     4741 agctttgggg tttacctctt cgtttgacga tgcgccggta gcgttcgccg aggaaggtgt
     4801 cggtgcggga ggcgcagccg gcggcctcgc cgaggacacc tttgaggtag gggttgccct
     4861 tgccggcctt cccggcgcgg tgtttggctg cggattggat ggtgcgcggg cagagtttgg
     4921 cccaggacac caggtgggcg gcggtgggga accggctcat ctccaggccc acctcggcga
     4981 tgatcacctg ggcggcgagc cggtcgatgc cggggatctc gtctaggagg gcactgaaca
     5041 acatctgtcc ggctcgcacg acgttattca gtgccctcct cggcgctcga gcgccgagag
     5101 cacccgggcg tcctgctcgc cgccgccgct ggcgtcctgt gcgccgcgct tggcctggcc
     5161 ggcgccgttg cccgtgccct cgccctcgcc ctcgccggtg ctggtggcgg ggccggtagg
     5221 cgcggtgggt gctgcggcgg cggggacggc cgcgatgagc tggtcgatgc gggcggtgag
     5281 catctcgatc tgggtggtca gcccgtcgat ctggtcgagc agcttgcgag ccagttcggc
     5341 gtggtgctcg tcgaaccggc cggtcaacgc ctccaccagg gcggcgtgct tggccttcat
     5401 ccgggcgcgg gccaacccgg cgagcatgag tcaggtccac ccgcatccgg gtgtagtccc
     5461 gcaaccgccg gatctacttc ggcggcacga acgagggccg cagcatcccc ttctcggtga
     5521 gcttggcctg ccacaccgag tccagcttgt cggtcttcgc ccgcccaggc acgttcttga
     5581 tgtcccggga attgaccaac tgcacatcca gcccccgggc ctccagcagg tagaaccaga
     5641 tccgccagta gtccgaggtg gactccacgg tcaccttctc cacctgctga cacaccaggt
     5701 gatcccccaa ctccaggatc gcccgcgtcg tcgcatcgac ctccctagct acgcttgccc
     5761 gccgccccgg ccgggactcg tgcggcatcc gcacacatac catccccgac gccttggcca
     5821 catcgaccgc gcagacccgc tcgatgagca actcgtgctc ctcgtcgcag atcacctccg
     5881 gcttcctctc cggtttct
//
LOCUS       DASYRV010000421         3662 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2375182, whole genome shotgun sequence.
ACCESSION   DASYRV010000421 DASYRV010000000
VERSION     DASYRV010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3662
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2375182"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(304..1959)
                     /locus_tag="VGQ24_11345"
     CDS             complement(304..1959)
                     /locus_tag="VGQ24_11345"
                     /inference="COORDINATES: protein motif:HMM:NF045305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEV8455482.1"
                     /translation="MPTILPIRHQPSLPLDRVILRDPPGAEAIEMDVLIVGAGPAGLA
                     CAIELARLVKQDQEAGGGISDVNIAVLEKAGSLGEHSLSGAVVNPRAFRELFPDLKTE
                     DLPFRQPVNAEAVYLLTERRALRIPTPPTMHNKGYYTASLCEIVRWLGERAEEHGINL
                     FAGFPADGLLIEGNAVRGVRTSPAGLDRQGKPTGNYTEPTDLTARITIVAEGTRGLLS
                     QAYREWQKIRSANPQLFALGVKEVWQTGRPLDRVIHTLGWPLPTDAFGGSFMYPLGPE
                     QVAIGLVVGLDYHNAGLDVHELLQRMKLHPLFRRQLEGGQLLEWGAKTIPEGGYYSLP
                     ERRYGDGILLTGDAVGFVDVPSLKGIHYAMQSGIFAARTAFAALKAGDSSAAALAPYD
                     RMVDDSYIAADLYRTRNLRLAFKHGFFAGGARAGLMTLTGGRFPGGRIDMPADAEIPR
                     IVTPARPLAVDNRLTFSKVDAVFKSGNATRDSIPSHLIVGRDITAEVADFYSHVCPAG
                     VYERTGNELRVNAANCVDCKATDVLGPRWTPREGGSGPRYRLM"
     gene            2010..2501
                     /locus_tag="VGQ24_11350"
     CDS             2010..2501
                     /locus_tag="VGQ24_11350"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEV8455483.1"
                     /translation="MDLAKAARDPWVWGHTLLFVLVGLGAPLIPRHLNLGAADFMLNR
                     VDPSWIRWLSLPLLVAGATVIGWGVRSLGRNLTPGTEPLPGASLVTSGAYAHMRHPIY
                     TGVVLVLAGYTLAWSNWTLALIVGFIALKLFEGKARREERWLTGRFPQYEAYMRHVRR
                     RVL"
     gene            2502..>3662
                     /locus_tag="VGQ24_11355"
     CDS             2502..>3662
                     /locus_tag="VGQ24_11355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEV8455484.1"
                     /translation="MTIPGFRSVPFTGVIFVMAEAGRRGYRYGHPEWCNLGQGQPETG
                     PLPGAPARITEVKIGPGDQDYAPIPGLWELRRAVADLYNGLYRQDARSKYTERNVCIC
                     SGGRASLTRAVAALGQVNLGHFLPDYTAYEELLDVFKLFTAIPILLEGQSGYHFGLDE
                     LRREITGRGLSALLLSNPCNPTGKVIQGEELKGWVDVARELGCSLLVDEFYSHYVWGT
                     GADDPGLVSAARYVSDVDADPVVLFDGLTKNWRYPGWRCTWIVAPQPVIEAVSSSGSF
                     LDGGGSKPLQRSAIPLLAPYLVGAETAAIHQAFRRKRQILGDGLKQAGIRFDVEPEGT
                     FYWWGDVSALPASINDGMSFFRAGLERKVICVPGEFFDINPGKRRSGRPSRFR"
BASE COUNT          649 a         1172 c         1163 g          678 t
ORIGIN      
        1 gtcgagctcc acgcatagct tcctcctgct ccggacagcg tagggtacgt gcgcctgcgg
       61 caagcagcgc gccacacgcc gcctaccgct cgcccgccac gaccctgtcc cgaagacctt
      121 gaggcacttg tattttcggg aggacgcgtg aaactcacaa tccgcaagaa tccgacggtg
      181 tctaacgatc atgcgtagga gaatcgtgca gatcgcagaa aagatttgaa cctgcggcgt
      241 gcgacgtaat tagcctcgcg cagccgttgc atccccttca tgcaagggct tgcgctccac
      301 cagctacatg agtcgatatc tcggtccgct gcctccttcc cgcggagtcc atcgaggtcc
      361 cagcacatcg gtcgctttgc agtccacaca attcgccgcg tttaccctca gctcgtttcc
      421 ggtccgctcg tacacgccgg ccgggcaaac gtggctgtaa aaatcggcta cctccgcggt
      481 gatatcccgt ccgacgatca ggtgagaggg tatggagtcg cgagtggcat tcccggactt
      541 gaacaccgcg tcgaccttgc tgaacgtgag ccggttatcg accgccaatg gccgcgcggg
      601 cgtgacgata cggggaatct cggcatctgc aggcatgtcg atccttccac cgggaaagcg
      661 tccgccggtc agcgtcatca ggccggccct ggcaccgccc gcgaagaacc cgtgcttgaa
      721 cgcgaggcgc aggtttcggg ttcgatagag atccgcagcg atgtaactgt cgtccaccat
      781 tcgatcgtag ggagcgagcg cggcggccga gctgtcaccc gccttgagcg cggcaaaggc
      841 ggtgcgggcg gcaaagattc ccgattgcat ggcgtagtgg atgcctttga gtgaagggac
      901 atccacgaat cccaccgcgt ccccggtcag cagaatgccg tcgccatagc ggcgctcggg
      961 aagcgagtaa tagccacctt ccggaatggt ctttgcgccc cactcgagca gctggccacc
     1021 ctcgagctgc cggcggaaaa gaggatgcag cttcatccgt tggagcagct cgtgcacatc
     1081 gagtccggcg ttgtgatagt cgaggcccac aaccagaccg atcgccactt gttccgggcc
     1141 gagcgggtac atgaagcttc cgccaaacgc gtcggtcgga agcggccatc cgagggtatg
     1201 tatcacccgg tccagcgggc gaccggtctg ccacacttcc ttcacgccca aggcgaagag
     1261 ctgtgggttc gcggagcgga tcttttgcca ttcccggtag gcctgcgaga ggagaccgcg
     1321 ggtgccttcg gccacgatcg tgatccgggc cgtcaggtcc gtcggctcgg tgtaattccc
     1381 cgtgggtttc ccctgccgat ccagtcctgc aggcgaagtc cgtactcccc gtaccgcgtt
     1441 gccttcaatc agcaagccgt cagccgggaa cccagcgaag agattgatcc catgctcctc
     1501 ggcccgctca cccagccagc ggacgatctc acagagcgat gcggtgtaat accccttgtt
     1561 gtgcatcgtc ggcggcgtgg gaatccgcag cgccctgcgc tcggtcagga gatataccgc
     1621 ctcggcgttc accggctggc gaaaggggag gtcctcagtc ttcaaatcgg gaaagagctc
     1681 gcggaacgcg cgtgggttga ctaccgcgcc cgacaagctg tgctcgccca ggctgccggc
     1741 cttctcgaga accgcgatgt tgacgtcgga tattccaccg ccggcttcct gatcctgttt
     1801 caccagccgg gcaagctcga tcgcacacgc gagcccggcc gggcccgcgc ccacaatcaa
     1861 cacgtccatc tcgatcgcct ccgcacccgg cgggtcccgc aggatcacgc ggtcgagtgg
     1921 caggctgggc tgatggcgaa tggggagaat ggttggcaag acggtgcgct cctgcgggtt
     1981 cggaagacgg tggaacttag attagagcca tggacctagc caaggcagcg cgggacccat
     2041 gggtatgggg acacaccctt ctgtttgttc tggtcggcct gggcgcgcct ttgataccaa
     2101 gacacctcaa cctcggtgcc gccgacttca tgctgaaccg ggtggatccc tcctggatcc
     2161 gctggctaag cctgcccttg ctcgtggccg gcgcgacggt gatcgggtgg ggagtacgat
     2221 cgctggggcg taacctgaca cctggcaccg agccgttgcc tggagccagc ctcgttactt
     2281 ccggggccta cgcccacatg cgccacccga tttataccgg cgtagtattg gtgctcgctg
     2341 gatatacact cgcatggagc aactggaccc tggcattgat cgtggggttc atcgcgctga
     2401 agctcttcga gggaaaggca aggcgagagg agaggtggtt gaccgggcgg ttcccacagt
     2461 acgaggccta catgcggcat gtccggcggc gagtgctgta aatgaccatc ccaggttttc
     2521 gttcggtccc ctttaccgga gtcatcttcg tcatggccga ggccggccgt cgcggctatc
     2581 gctacggtca tcccgaatgg tgcaacctcg gccagggcca gcccgagacc ggcccgctcc
     2641 ccggcgcccc ggcgcgcatc accgaggtca agatcggacc aggcgaccag gactacgcgc
     2701 cgatcccggg cctctgggag ctgcgccgcg cggtggcgga cctgtacaat gggctctacc
     2761 gtcaggacgc gcgctccaaa tacaccgagc ggaacgtatg catttgcagc gggggccgag
     2821 cctcgcttac ccgggccgtg gccgcgttgg gccaggtgaa cctcggccac tttctgcccg
     2881 actacacggc gtacgaggag ctgctcgacg tcttcaagct cttcacggca attcccatcc
     2941 tgctggaggg gcagagcggc taccacttcg gcctcgatga gctgcgccgg gagatcaccg
     3001 gccggggtct ctcggcgctg ttgctctcga atccatgcaa cccgacggga aaggttatcc
     3061 agggggaaga gctgaagggg tgggtggacg tcgcgcgcga gctggggtgc tccctgctcg
     3121 ttgacgagtt ctactcccac tacgtctggg gcacaggggc agacgatccc ggtctggtct
     3181 cagcggcccg atacgtgagc gacgtcgacg cggatccggt cgtgcttttc gacggactga
     3241 ccaagaattg gcgctatccc ggatggcgtt gcacctggat cgtggcgccg cagccggtga
     3301 tcgaagcagt gtcgagcagc ggatcgtttc tcgacggtgg tggcagcaag ccgctccaac
     3361 gctcggccat cccgctgctc gcgccgtatc tggtaggggc ggagacggcg gccattcatc
     3421 aggctttccg acgcaagcgc cagatcctgg gcgatggtct caagcaagca gggattcgat
     3481 tcgatgtcga accggaaggc accttctact ggtggggaga cgtgtcggcc ctgcccgcgt
     3541 ccatcaacga tggcatgtcg ttcttccggg cagggctgga gcgtaaggtc atctgtgttc
     3601 ccggcgagtt cttcgacatc aaccccggca agcgccgcag cggccggccc tcacgtttcc
     3661 gc
//
LOCUS       DASYRV010000422         8520 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_379922, whole genome shotgun sequence.
ACCESSION   DASYRV010000422 DASYRV010000000
VERSION     DASYRV010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8520
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_379922"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..438)
                     /locus_tag="VGQ24_11360"
     CDS             complement(<1..438)
                     /locus_tag="VGQ24_11360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HEV8455485.1"
                     /translation="MTQHPVVLALTGASGAPYGVRLLGVLASQRVPVWLIASEHGLRL
                     LRDECGIKSLDGLREATGGDWASVTLFPDEDRGALPASGSQRTSGMVICPCSMGTVAA
                     IAMGTSRSLVERAADVTLKERRKLILVPRETPLSLVHLRNLVAV"
     gene            complement(644..1573)
                     /locus_tag="VGQ24_11365"
     CDS             complement(644..1573)
                     /locus_tag="VGQ24_11365"
                     /inference="COORDINATES: protein motif:HMM:TIGR01475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA-like polyprenyltransferase"
                     /protein_id="HEV8455486.1"
                     /translation="MSTRPPDRLTACPPAREAQTFAGESLLVRYVNLVKLPHTLFALP
                     FALLGVLAASRTTQVTARVVALVVLAFSAARWAAMAFNRIADRHFDARNPRTLNRELP
                     QGKLSVNQAWISVLAAAALFVIAAAQLNSLCLRLSPLALGWILLYSLSKRFTWWPHLW
                     LGVSLAIAPVGGYLAVTGGWSHPAWVLLAITLGVATWVAGFDIFYALPDAGFDRAQGL
                     RSAVVRLGESRAIRLAKLLHGVTIPALALFGYGAGFGTWYYIGLVTAAAILAYEHQLV
                     RPGDLSRLDAAFFTMNGVMSLTVFGFALLDRVL"
     gene            complement(1570..3108)
                     /locus_tag="VGQ24_11370"
     CDS             complement(1570..3108)
                     /locus_tag="VGQ24_11370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis decarboxylase"
                     /protein_id="HEV8455487.1"
                     /translation="MALDNLSDFIKAIDGIGELVRVSHPVRARLELAEIADRVMKSPG
                     GGPALLFDHVLLEDGRKSSQPVAINLFGSMRRMCLALGTESLDDIGGRISEMLNLKVP
                     EGLFGKLAMLPKLAEIGKFPPRVKGGRPPCQEVVLRESEVDLDNIPFLTTWPGDGGRY
                     ITLPMVITIDPVRGIRNVGMYRVQVLDRNTLAMHWQRHKVGAAHWRDMAARGERMPVV
                     IALGGDPASVYSGSAPLPPTIDEFLFAGFLRGQPVELAHAVTCELDVPAQAEMVLEGY
                     IDPAEPLVLEGPFGDHTGFYSLADYYPKVHVTAVTSRRNPIYPATLVGRPPMEDYYLG
                     HATERIFLPLLKLTIPEIVDYHMPAPGIFHNLVFVSIDKQYPGQAYKVMNALWGQGLM
                     SLAKVLVIVDKEVNVQDPDEAWWIALNHIDPERDVRFTLGPIDVLDHSSRAFTYGSKM
                     GIDATRKWKEEGFDREWPERITMDTETKKRVDEMWDKLGIDLAVGRSAGRTVNDTKAR
                     GAGR"
     gene            complement(3286..4014)
                     /locus_tag="VGQ24_11375"
     CDS             complement(3286..4014)
                     /locus_tag="VGQ24_11375"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone/menaquinone biosynthesis
                     methyltransferase"
                     /protein_id="HEV8455488.1"
                     /translation="MLASDRQLPVSGGPEKRAYVRDIFTAIAPTYDRLNRIISFRFDQ
                     GWRRYAVARLGWERKPEGIYLDLCAGTLDFGATLASRPGFRGRIIGADFVRRMLELGR
                     HKSPWLAPVNADALDLPFSDQAFDGAMVGWGVRNLVDLDAGLAETARVLKPGSRLVIL
                     EMALPPHPVLRAAYQFYFRRVMPLIGRAISKHTTAYSWLPESTRVFPSPPELARRMEA
                     QGFADVHYELFIGGVCAMHVGTKT"
     gene            4065..4670
                     /locus_tag="VGQ24_11380"
     CDS             4065..4670
                     /locus_tag="VGQ24_11380"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEV8455489.1"
                     /translation="MASSRPEWASLSDQDVVLRARSGQEAAYRELIRRYERPVFALLF
                     RMVRDRELAEDLAQETFVKALNAIDSYRPEFKFSSWIFKIGNNAAIDHLRRRELDTLS
                     LDGSPHAETPEAMQATALQIGARQESPLDIVEAKELGGAIEAAIGSLRPEYRSCILLR
                     HVEGRAYEEIAEILNLPLGTVKTYIHRARNELRQSLAHLKE"
     gene            4708..5316
                     /locus_tag="VGQ24_11385"
     CDS             4708..5316
                     /locus_tag="VGQ24_11385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455490.1"
                     /translation="MTRPSESHLSPDEIDAWLAGALAPALQHHVDQCQACLEQLRVER
                     DIADQIAALPLLSPTLGFADRVMASVIVPDPFAIRALQATRRRLFATPKSVALAAGLA
                     LLLLGSMAGSIVWSLSHQQTLASLGSWLMTQAGQAAWFGVRGLASNLIEQPWYNRIRA
                     LVENPGRLALISAMASLAYLGGVVALRRLLALPTQQVAHASI"
     gene            5303..6580
                     /locus_tag="VGQ24_11390"
     CDS             5303..6580
                     /locus_tag="VGQ24_11390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HEV8455491.1"
                     /translation="MRASSRLFLLLALLPAVGQRPVGAETRPRSPVADLVDQFRILIT
                     DVSSRLHPQRESARPRVRPQAIPQGGTPIDLGDLSRPTVVETRLRSALERGDGTLRLT
                     VAGGSARQGDFSLGSSEDLKGHLLVVDGDADVYGSLRGNLVTIDGDVVVHPGGVVSGD
                     VLTLGGEVRDEGGEIGGEVRTLPSSPRAASIAGEAAASLTPFQSVLHRGAGVLGVFLT
                     LCALGFGLVMFGRQNLEVVSDTVSHSFGRAFVTGLLGQILLLPTFGMLVVGLILSVAG
                     ILLLPFAVAVFAMLTVIAVVGGYLAVAHAMGETYTRRRMALGVVIGSANSYRYLLVGL
                     LSLASVWVAWALFGWVPIAGSIVWGAAFFVTWLLGTAGFGAALLSRAGIKENFAGRLL
                     PPEALTDEYLWATPQFGVPAGRRPGTRTPTRGA"
     gene            6583..7425
                     /locus_tag="VGQ24_11395"
     CDS             6583..7425
                     /locus_tag="VGQ24_11395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="LiaF domain-containing protein"
                     /protein_id="HEV8455492.1"
                     /translation="MRLGLLALPLVLGASSAEAQTMRPFATFRQMHGETRLGAKLEYG
                     AGSLRIGPGQPAELYRMDLSYDEDRFVPLSDFDATRGSVLLGLRAAGNAGVRVVSRNQ
                     LQQVAAVAFSPRVDLALDLTLGAVDADVELGGLRVSTLDLKTGASRSVVRFSQPNLTR
                     CRRADFSAGAAELSVIGLGNSRCDDIEFEGGIGKVTLDFGGAWTSSARVQVKMAVGEL
                     TLRLPRKVGVRIAMDRFLSRFAPAGLVRRGNEFVSPGYDRSQRTLDLDVTTAMGGVNV
                     EWVD"
     gene            7518..8147
                     /locus_tag="VGQ24_11400"
     CDS             7518..8147
                     /locus_tag="VGQ24_11400"
                     /inference="COORDINATES: protein motif:HMM:NF024937.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4126 domain-containing protein"
                     /protein_id="HEV8455493.1"
                     /translation="MSPIETLGFALGTSFASGLNLYLTVAAAGLFQRFGLVQLPDSLQ
                     VLANPIVLGVAITLFVIEFIADKIPYVDTAWDAVHTFIRPPAAAIMAYSAFGHVPEEW
                     KVGASLLAGGVALTSHGAKATSRAAANTSPEPVSNWTLSVLEDGLALFLTWMAATHPV
                     ITALIVVVLVSLAVMVIWKLYGYFKVIRARLRRQTTAKNPTTEGGRTQR"
     gene            complement(8243..>8520)
                     /locus_tag="VGQ24_11405"
     CDS             complement(8243..>8520)
                     /locus_tag="VGQ24_11405"
                     /inference="COORDINATES: protein motif:HMM:NF042701.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SAM hydroxide adenosyltransferase"
                     /protein_id="HEV8455494.1"
                     /translation="EGKSVVGEIVYIDRFGCLITNLAAELIPPYATLEIEDLDLGPLQ
                     RTFNDVTNGGLLAYVGSGGAIEIAVRNGSAARRLGVGVGGRVRARLG"
BASE COUNT         1450 a         2801 c         2754 g         1515 t
ORIGIN      
        1 gaccgcgacc aggttcctga gatgcaccag cgacagcggc gtttccctcg gcaccagaat
       61 gagcttccgc cgctccttga gggtcacgtc ggcagcccgc tccaccagcg agcggctcgt
      121 tcccatggca atggccgcta cggtgcccat tgagcagggg cagatcacca tgccgctggt
      181 tcgctgggaa ccggaggccg gcaaggcccc gcggtcctcg tcggggaaca gggtcaccga
      241 ggcccagtcg ccgccggtcg cctcgcgtag cccatccagc gacttgatcc cgcattcatc
      301 gcgcagcagc cgtaacccgt gctccgatgc gatcaaccac accggcactc gctggctggc
      361 gaggacgccg agcaggcgga cgccgtaggg ggcgcccgag gcacccgtca gggcgagaac
      421 aacgggatgc tgagtcatcg gccccggcgg ttcggggtgg gcgagtgatg agggtgttta
      481 ggcggtacgg cggtacggcg gtacggcggt aatggcagga tgggagcgac ctcgctctca
      541 cgcttggctg gaattgggat ctttccctta cggctccgtt tcactttttc ggccattctc
      601 tgccctttcc accactttct accgccgtac cgccctgccg ccttcataaa acccgatcga
      661 gaagtgcaaa cccgaacacc gtcaacgaca tcaccccgtt catggtgaag aacgcagcgt
      721 cgagccggga cagatcaccg ggcctcacca gttggtgctc gtaggcgaga atggcggccg
      781 ctgtgacgag accgatgtag taccacgttc cgaacccggc cccgtagccg aacagggcga
      841 gggccggaat ggtgactccg tggagcaact tggcgaggcg aatcgcccgg gactcgccca
      901 ggcgcacgac cgcgctgcgg agcccctgcg cccgatcgaa tccggcatcc ggcaaggcat
      961 agaagatgtc gaatcccgcc acccatgtcg ccacgccgag cgtgatcgcg aggagtaccc
     1021 aggccggatg gctccatcca ccggtgacgg cgagatagcc tccgaccggc gcgatggcga
     1081 ggctcacacc gagccagagg tggggccacc aggtgaaccg cttcgacaga ctgtagagca
     1141 gaatccagcc gagcgctaac gggctcaacc gcagacacag agagttgagc tgcgctgccg
     1201 cgatcacgaa gagcgccgcc gcggcgagga ccgagatcca ggcctggttc accgatagct
     1261 ttccttgggg cagctcgcga ttgagggtcc gcggattgcg cgcgtcgaag tgccggtccg
     1321 cgatccgatt gaaggccatc gccgcccagc gggcggcgga gaacgcaagc accaccaggg
     1381 ccaccacgcg cgcggtgacc tgggtggtcc gggaagccgc cagaacaccg agtagcgcga
     1441 agggaagggc aaagagagta tgcggcagct tcaccaggtt gacgtagcgg acgaggaggg
     1501 attcgccggc gaaggtctgg gcttcgcggg cgggcggaca ggcggtcagc cggtcaggcg
     1561 gtcgggtact cacctgcccg ctccccgcgc cttcgtatcg ttgaccgtcc gaccggccga
     1621 ccggccgacc gccagatcaa ttcccagctt atcccacatc tcatccactc tcttcttcgt
     1681 ctccgtatcc atcgtgatcc gctcgggcca ctcccggtcg aagccctctt ccttccactt
     1741 ccgagtggca tcgatgccca tcttgctccc ataggtgaac gcccggctgg agtggtcgag
     1801 cacgtcgatc ggccccagag tgaagcgcac gtcgcgctcg ggatcgatgt ggttgagcgc
     1861 gatccaccac gcctcgtccg ggtcctgcac attcacctcc ttgtcgacga tgaccagtac
     1921 cttcgccagg gacatgaggc cctgccccca gagcgcgttc atgaccttgt aagcctgccc
     1981 ggggtactgc ttgtcgatcg agacgaagac gaggttgtgg aagatccccg gcgcgggcat
     2041 gtggtagtcc acgatctcgg gaatggtgag cttcagcagc ggcagaaaga tgcgctcggt
     2101 ggcgtggccg agatagtagt cctccatggg cgggcggcct accagggtag ccgggtagat
     2161 cgggttccgc cgggaggtca cggcggtcac gtgcaccttt gggtagtagt cggccagcga
     2221 gtagaagccg gtgtggtcac caaacggccc ctccaacacc agcggctcgg caggatcgat
     2281 gtacccctcg agaaccatct cggcctgggc tgggacatcg agctcgcacg tgacggcgtg
     2341 agccagctcg accggctgcc ctcggaggaa tcccgcaaag aggaactcgt cgatagttgg
     2401 tggcagcggc gccgacccgg agtagacgct ggccgggtcg ccgcccagtg cgatcaccac
     2461 cggcatccgt tccccccgag cggccatgtc gcgccagtgg gccgcgccga ccttgtgccg
     2521 ctgccagtgc attgccagcg tgttgcggtc gagcacctgg acccggtaca tgccgacatt
     2581 gcgaatgccg cgcaccggat cgatggtgat caccatcggt agggtgatgt accggccgcc
     2641 gtcccccggc caagtggtga ggaacgggat gttgtcgaga tcgacctcgc tctcacgcag
     2701 cactacctcc tggcatgggg ggcgcccgcc ctttacccgc ggtgggaact tgccgatctc
     2761 ggccagcttc ggcagcatcg cgagctttcc gaagagcccc tcgggcacct tgaggttcag
     2821 catctcggag atccgcccgc cgatgtcgtc caggctttcg gtgccgagtg ccaggcacat
     2881 ccgacgcatc gagccgaaca ggttgatggc gacaggctgg gaactcttgc ggccatcttc
     2941 cagaaggaca tggtcgaaga gcagggccgg ccctccgccc gggctcttca ttacccggtc
     3001 ggcgatctcc gccagctcga gccgggcgcg caccggatga gacacgcgga ccagctcgcc
     3061 gatgccgtcg atggctttga tgaagtcgct aaggttgtct aaagccattg ggcgaggctc
     3121 agcacggctg tcaccctgac cctgagcgca gtgaagggga gggggccgaa actcagggcg
     3181 tccttccaaa tcgggcgatg acgcagaaac ggcattccgg ccccctcgct tcgctcaggg
     3241 tgacatgctc ctctggcggc ccgttcaccg ttcactgttt accgttcacg tttttgtccc
     3301 gacgtgcatc gcacagactc cgcctatgaa gagctcatag tgcacgtcgg caaacccctg
     3361 cgcctccatt ctgcgcgcga gctcgggagg cgatggaaag acgcgcgtag actctggtag
     3421 ccaactatag gccgtcgtat gtttggagat tgcgcgacca atgagcggca tgacccgccg
     3481 gaaatagaac tggtacgcgg cgcggaggac ggggtgcggc ggcagggcca tctcgagaat
     3541 gaccagccgt gaccccggct tgaggacccg cgccgtttcg gccaggccgg catcgagatc
     3601 caccagattc cgtactcccc agccgaccat cgcaccatcg aaggcctggt cggaaaacgg
     3661 cagatcgagc gcatcagcgt tgaccggggc aagccaaggc gatttgtgcc ggccgagctc
     3721 gagcatccgg cggacgaagt cggcgccgat gatccggccg cgaaagccgg gccggctggc
     3781 cagcgtggcg ccgaaatcca acgtcccggc gcacaggtcg aggtagattc cctccggttt
     3841 ccgctcccac cccagacgcg cgaccgcgta ccgtctccat ccttgatcga agcggaaact
     3901 gatgatgcgg ttgagccggt cgtaggtggg ggcgatggcg gtgaagatgt cgcgaacgta
     3961 cgcccgcttt tccggaccgc ctgaaacggg taactgacga tccgaggcta acataggcgc
     4021 tgaatgtagt cccgcaggaa gccgcttggc aaggcaaccc tctcgtggct agcagccgtc
     4081 cggaatgggc cagcctcagc gatcaggacg tggttctgcg cgcccgatcg ggccaggaag
     4141 ccgcctaccg ggagctgatc cgtcgctacg aacggccggt ctttgccctg ctcttccgga
     4201 tggtgcgcga ccgggagctg gccgaggatc tggcgcagga aacgttcgtc aaggcgctca
     4261 acgcgatcga ttcctatcgt cccgaattca agttctcatc ctggatcttc aagatcggca
     4321 acaacgcggc catcgatcac ctgcggcggc gggaactgga caccctgtcg ctcgatgggt
     4381 cccctcatgc cgaaactccc gaggccatgc aggcgacggc gcttcagatc ggagcgcggc
     4441 aagagtcgcc gctcgatatc gtagaagcca aagagctcgg gggcgccatc gaggcggcca
     4501 tcggatccct cagaccggaa taccggtcct gcatcctcct gcgccatgtc gaggggcggg
     4561 cgtatgagga gatcgcggaa attctgaacc tcccccttgg cacggtgaag acctacatcc
     4621 atcgcgcgcg caacgagctc cggcagtcgc tggcccatct caaggaatga aaccttcatt
     4681 ctaccctcaa cgtaggaggg tccacttatg acccgtcctt ccgaatcgca tctctccccc
     4741 gatgagatcg acgcctggct tgccggggcg ctcgcgccgg cgttgcagca tcacgtagac
     4801 caatgccagg cctgtctcga gcagctgcgg gtagaacggg acatcgccga tcagatcgcc
     4861 gcgttgccgc tcctgagtcc cacgctgggg tttgccgacc gggtcatggc gtcggtcatc
     4921 gttcccgatc catttgctat ccgagcgctc caggccacgc gtcgccgtct cttcgccacc
     4981 ccgaaatccg tcgccctcgc cgccggtctt gccctgctcc tcctcggctc catggccggg
     5041 agcattgtat ggagcttgag ccaccagcag accctcgcgt cgctcggctc ctggttgatg
     5101 acccaagccg gacaggccgc gtggttcggg gtccggggtc tcgcatcgaa cctcatcgag
     5161 caaccctggt acaaccgtat ccgcgcgttg gtggagaatc ccggccgtct cgcgctcata
     5221 tcggccatgg cgtcactcgc ctatctcggc ggggtggtcg ccctgcgccg ccttctggct
     5281 ctcccgaccc agcaggtggc ccatgcgagc atctagccgg ctgttcctgc ttctcgcgtt
     5341 gctccccgca gtggggcagc ggccggtcgg cgccgagacg aggccccgga gcccggtggc
     5401 agatctagtc gaccagttcc ggatcctcat caccgatgtc tcctctcgac tgcatcccca
     5461 gcgcgaatca gccaggccgc gggtccgtcc tcaggccatt ccccagggcg gcacgccgat
     5521 cgacctcggt gatctcagcc ggcctacggt cgtcgagacg cggctccgct cggccctgga
     5581 gcggggtgac ggcacgcttc gcctcacggt tgccggcgga agcgcccgcc agggcgactt
     5641 cagcctgggc tcctcggaag acctgaaggg ccacctcctg gttgtggatg gggacgccga
     5701 cgtctacggc tcgttgcgag gaaacctggt gacgatcgat ggagacgtgg tggtgcatcc
     5761 gggcggggtg gtgtccggcg atgtactcac gctcggtggt gaagtgaggg acgagggcgg
     5821 cgagatcggt ggcgaagtgc ggacgctgcc ctcgtccccg cgagccgcct cgatcgcggg
     5881 agaagcggcc gcctccctta caccgtttca gagtgtgctc caccgcggcg ccggcgttct
     5941 cggcgtgttc ctcaccttgt gcgccctggg cttcgggctg gtgatgttcg gacgccagaa
     6001 tctcgaggtg gtgtccgata ccgtctcgca ctcgttcggt cgggccttcg tgaccgggct
     6061 cctcggacag atcctcctgc tccccacgtt cgggatgctg gtcgtgggcc tgattctcag
     6121 cgtcgccgga attctcctgc tgccatttgc cgtcgccgta ttcgccatgc tcaccgtgat
     6181 cgcggtagtc ggcggttacc tcgccgtggc acacgcgatg ggggagacct acacccggcg
     6241 gcgaatggcg ctgggcgtgg tgatcggatc ggccaacagc tatcgctacc tgctggtcgg
     6301 tcttctgagc ctggccagcg tctgggtagc gtgggccctg ttcggatggg tcccgattgc
     6361 cggcagcatc gtgtggggag cggcgttctt cgtgacctgg ttgctcggca cggccggatt
     6421 cggggccgcc ctgctcagcc gggccggcat caaggagaat ttcgcgggca ggctgctccc
     6481 gccggaagcg ctcaccgacg aatacctctg ggccacgccg cagttcggcg ttcccgccgg
     6541 gcggcggccg gggacccgga ctccaacccg cggagcgtga gcgtgcggct cggtctcctg
     6601 gctctgccgc tggtgctcgg ggccagctcg gccgaggccc agaccatgcg cccctttgcc
     6661 acgttccgcc agatgcatgg cgagacccgg ctgggcgcaa agctcgagta tggcgcaggg
     6721 agtcttcgaa tcgggccggg ccaaccggca gagctctacc ggatggacct ctcgtacgat
     6781 gaagatcgat tcgtgccgct gagcgatttc gatgcgacac gcgggtcggt tctcctgggg
     6841 ctcagagccg ccggcaatgc cggtgtgcgc gtcgtctctc ggaatcaact gcagcaggtg
     6901 gcggccgtcg cattctcacc ccgggtggac ctggccctcg acctcacgct cggggccgtg
     6961 gatgccgacg tggagctcgg cgggctcagg gtcagcactc tggatctcaa gactggcgcc
     7021 agccggagcg tggtccggtt ctcccagccc aatctcaccc gctgccgccg cgccgatttc
     7081 agcgcgggcg ccgcggagct ctcggtgatt ggcctgggaa acagccgctg tgacgatatc
     7141 gagttcgaag gcggcatcgg caaggtgaca ctcgattttg gcggggcgtg gacctcgagc
     7201 gcgcgagtcc aggtgaagat ggccgtcggc gagctcacgc tccgcttgcc acgcaaggtc
     7261 ggcgttcgga tcgcgatgga cagatttctc tcgcgctttg cgccggccgg cctggtgcgc
     7321 cgggggaacg agttcgtgtc gcccggctac gaccgctccc aacggacgct ggatctcgat
     7381 gtcaccacgg cgatgggggg agtaaacgtg gagtgggtag actaaggtga gaagtaagag
     7441 gtaaggggtg agagggctaa ggtggccgag accacttact ctcttacctg tcacctctca
     7501 cctcttacct tgcgtacatg tctcctatcg aaaccctggg cttcgcgctc ggcacctcgt
     7561 tcgcctccgg gctcaacctt tacctcaccg tagcggcagc gggtctcttt cagcggttcg
     7621 gcctcgtcca gctccccgat tccctccagg tgctcgccaa cccgatcgtg ctcggcgtgg
     7681 cgatcacgct cttcgtcatc gagttcatcg ccgacaagat cccgtacgtc gacacagcat
     7741 gggacgcggt ccacaccttc attcgtcctc cggccgccgc gataatggcc tacagtgcct
     7801 ttggtcacgt gccggaggag tggaaggttg gtgcctcgct cctcgccggg ggtgtcgccc
     7861 tgacctcgca cggggccaag gccaccagcc gggcagcggc caataccagc cccgagccgg
     7921 taagcaactg gacgttgagt gttttggagg atgggctggc gctgttcctg acctggatgg
     7981 cggccacgca cccggtaatc acagccttga ttgtggtggt attggtaagc ctggcagtga
     8041 tggtgatctg gaagttgtac ggctacttca aggtcatacg ggccaggctc cggcgccaaa
     8101 caactgctaa aaaccctacc acagagggag gaaggacaca gaggtgacgt caaccatgaa
     8161 agctccgctc tcgcccagcc agcctcggaa cttgaatgtt attcgtacct ctgtgtcctc
     8221 tgtgcctctg tggtgaaacg gcttacccta gcctggctcg caccctacca cccactccta
     8281 cacccaaccg gcgtgccgcc gacccgttcc gcaccgcgat ctcgatcgcg ccgccggacc
     8341 cgacatatgc cagcagtccg ccgttggtga catcgttaaa ggtgcgctgc agggggccga
     8401 gatcgaggtc ctcgatctcg agcgtagcgt aggggggaat cagctcggcg gccagattgg
     8461 taatcaggca gccgaatcgg tcgatataaa cgatctcgcc tacgacggac ttcccctcgt
//
LOCUS       DASYRV010000423         6457 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2247100, whole genome shotgun sequence.
ACCESSION   DASYRV010000423 DASYRV010000000
VERSION     DASYRV010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6457
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2247100"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1323
                     /locus_tag="VGQ24_11410"
     CDS             <1..1323
                     /locus_tag="VGQ24_11410"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEV8455495.1"
                     /translation="RTPQGFRSSAEVTRTGDTALVAPPVSIAALLDSATYSLPDTSEF
                     TVKKYRVHFTPDYVARPSIGYARDNFGRGFFGGTAVSLSDILGNEQLVFAGYVNGRIS
                     EAQVLAAYANMSHRINWATGISQEPYYFYEPSEIRVGSPSPSENTFVTNVRRLVVRSV
                     FGQAYYPISRFQRIEGSMRAANVDDAILSILEPYDPQFGFPTQDPTLETNNRAGVNYL
                     QPSTALVFDNSLFGYTSPFFGSRYRLEFAQTLGDWKFSQVTADYRRYDPIIGPVVFAT
                     RVLYFGRIGRDAEKFRIFGGSTELLRGNTSGSYRRHECLNTNDANTETGCAELDRLVG
                     TQLGVASAELRFPILTPQFGFLPNGFPPIEGAIFYDIGLTWDEGSTLRWSREPGDDPT
                     RVRSPLQTFGFSIRMNLLGFAIARVDYSIPQERRMVKGLWTFSLGPAF"
     gene            1356..2813
                     /locus_tag="VGQ24_11415"
     CDS             1356..2813
                     /locus_tag="VGQ24_11415"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEV8455496.1"
                     /translation="MRLPVKRPHCPTALLPRYLPAVTPRIILTGAAFLLLPVACGGGP
                     ELASGSLPSSSRSVPNVTALRIPRDGGLARLYRIPSLDSAAWKAADALPPIATPVGAD
                     AEQGLVFVLDRKNNVVALDLDTRRVRTYLENVRYATVGPDGAVYAVDTGSTVTQLVRR
                     TPVRFRSKLQGKPTELYGTIDGALLARLGGNRPALEFLGSDQAPTSTSLPEGQVAATF
                     LGDLIAVAADTAVVLYTPQNKSKPRSIPVEGDARAVLFSPSGHRLYIARAAAPLLVLD
                     RFANTRLREIELPGPARALRGDIYGNWLLVQPQAGDSVWVIDMGSGKYLGATAARWTD
                     DLPAVAPAHTLLVRRGSDLVALDLAASGFPELGRVKGGAADFWLPLAWHPAQENELPL
                     EADSAALAASDTGPARPTVYLQVSSSQNPTWASELSDKLRAAGLPAAVLSPRRSGELF
                     RVVLGPYATREQAEETGRKLGMPSFIVTAQDQSSQ"
     gene            2843..6313
                     /locus_tag="VGQ24_11420"
     CDS             2843..6313
                     /locus_tag="VGQ24_11420"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEV8455497.1"
                     /translation="MKLTKLELSGFKSFADTVTLTFEEGVTAIVGPNGCGKSNVSDSV
                     RWVLGEQSARLLRGGKMEDVIFQGSAARRPVNVTEVSLFLDNSDGDLPIAYREVVVTR
                     RLSRSGQSDYLLNGSPVRLRDIQDLLRGTGLGSDAGVVIEAKMIDLLLSDRAEERRSL
                     FEEAAGIGLYRDRKHSTERRLEETAVDLQRVDDLISEVQSQIRSLARQRGKAERHAKL
                     SEEKFTVQLTLARRLLDRLAGEAAGMEARFAELAELLPAARQRLSEGEAGREQLARGR
                     AAAEAQRTEITRRLATLQVEIGRIDGDLALAAERLANASSRRLRAAEERAHMEQRASQ
                     ADIEQAAADEDRNAAAAEHERIQAELTGRAADEEAVRNRLGEQRAGVRRLEQELQAQA
                     QSLKSLEGERTALEGELASLRERAAQAAAQLASLRSELAASERRRDGAIERAGFLSQE
                     AKRATAAAERARHLLAEAREREAMNRADRRQAEETLAQMAARRQALEELERDRVGLAP
                     GAAALLAARDRFDGGVLGPLSDFVSTGQEDAELAERLLGDWMHAVLVRSADTVRQVQT
                     WHAGQQPGALVLLPLEPGPLTMSGGQPLDNRLRVEGPAAGWVRAALAGSEILDDAGHV
                     LRRASGAIFLSGAGAPSGPLRRRAELATLVQEVAQAEAAVSVADAALHQTAEQLTQRE
                     HSLAQLTAAAEQARDAERQALAAREDVLRLVGNLTRESAESEAQLQRLSDRVARSAQR
                     LAEIDEALVSGELTRGRLENELGIGRTLLAELEAEQEAAREQRAHWQVQEAHLAGSLR
                     AATDRLERAGQVRAEAETAAHSLANELTQLEAETGALAGQQAEWLESRAERQAALEEL
                     EAASTQAEAGLSRAEATLSRAERELADARAQLESAGEESHGLQVRLTEAAGTRRSIVE
                     RVEAEWHRPFDRLMESAVLLDLDLETLESEASRIVAALDSIGPVNPLAVEEHAEETKR
                     LEFLTSQRDDLVSARQSLIQAIREIDGTARTMFVETFTAIQANFSKVFQTLFGGGECE
                     LRLASPDDPLESEIDIHAAPRGKRTQRIHLLSSGERTLVAVSLLFSIYLTKPSPFCLM
                     DEVDAPLDDANVGRFTRLLEEFKSDTQFLVITHNPRTMQAADAVYGVTMQEPGVSTIV
                     GVRLGEREHV"
BASE COUNT         1073 a         2142 c         2190 g         1052 t
ORIGIN      
        1 cgcactcctc agggattccg ctcctccgcc gaggtgaccc gcaccggcga tacggccctg
       61 gtagccccgc ccgtctcgat cgcggcgttg ctggattcgg ccacctatag cctgcccgac
      121 accagtgagt tcaccgtcaa gaaataccgg gtgcacttta cgccggacta cgtggctcgg
      181 ccatccatcg ggtacgcccg ggataacttc ggccgcggat tcttcggcgg caccgcggtg
      241 tcgctgagcg atatcctggg taacgaacaa ctggtgttcg ccggctacgt gaacgggcgg
      301 atcagtgagg cccaggttct ggcggcctac gcgaacatga gccaccggat caactgggcc
      361 acgggaattt cccaggagcc ctactacttc tacgagccga gcgaaattcg cgtgggctcg
      421 ccgagtcctt cggagaacac cttcgtcacg aacgtccgcc gtctggtcgt gcggtcggtc
      481 ttcgggcagg cctactaccc catcagccgg ttccagcgga ttgagggtag catgcgcgcc
      541 gccaacgtgg atgacgcgat attgagcatc ctggagccat acgatccgca gttcggcttt
      601 cccacccagg atcccaccct cgaaacgaac aaccgggcag gggtgaacta cttgcagccg
      661 tccaccgcgc tggtgttcga caactcgttg ttcggctata cctcgccgtt tttcgggagc
      721 cggtaccggc tcgagttcgc ccagaccctg ggagactgga aattctccca ggtgacggcg
      781 gactaccgcc ggtacgaccc gatcatcggc ccggtggtgt tcgcgacccg tgtgttgtac
      841 ttcggtcgga ttggtcgcga tgccgagaag ttccggatct tcggcggaag caccgagctg
      901 ctccgcggca acacgtcggg ctcgtatcgt cgccatgaat gcctgaatac caatgatgcc
      961 aacaccgaga ccggttgcgc cgagctggac cggctggtcg gcacccagct cggggtcgcc
     1021 agcgcggagc tacggttccc catcctcacc ccgcagttcg ggttccttcc caacggcttc
     1081 ccgccgatcg aaggcgcgat cttctacgac atcggcctga cctgggacga ggggagcacg
     1141 ctcaggtgga gtcgcgagcc gggggacgat ccaacgcgcg tccgctcgcc gctccagacc
     1201 ttcggcttct ccatccggat gaacttgctc ggctttgcga tcgcccgggt ggattactcg
     1261 attccgcaag agcggcggat ggtgaaggga ctctggacct tcagtttggg gccggcgttt
     1321 taactgcggg gcggcggggc ggcggggttg ggcacatgcg cttgccggta aagcggcccc
     1381 actgccccac tgccctgctg ccccgctatc ttccggccgt gactccccga atcatcctga
     1441 ccggggcagc gttcctgctc ctgccggtgg cgtgcggcgg tggcccggag ctcgcgtccg
     1501 gcagcctccc ctcatcgtca cgtagcgtgc ccaacgtcac tgcactcaga atcccgcgtg
     1561 acggcgggct cgcccggctc taccggatac cctccctcga ttctgcggcc tggaaggcag
     1621 ccgatgccct tcctcccatt gcaactcccg tgggtgcgga cgcggagcag gggctcgtat
     1681 tcgtgctcga tcggaagaac aacgtcgtcg cgctcgatct cgacacccgc cgggtgcgca
     1741 cctacctcga gaacgtccgg tacgccacgg tggggcctga cggagcggtc tatgcggtcg
     1801 acaccggaag caccgtcact cagctcgtgc gccgcacgcc cgtccggttt cgctccaagc
     1861 tgcagggcaa acccaccgag ctgtacggca ccatagacgg tgctttgctc gcccgcctcg
     1921 gcgggaatcg tccggcgctg gagtttctcg gctcggacca ggcgccgacg tccacatcgc
     1981 tgcctgaagg acaagtggcg gccacctttc tcggtgacct gattgcggtg gcagccgaca
     2041 cggctgtcgt cttgtatacc ccacagaaca agtccaagcc gcgctcgatc ccggtagagg
     2101 gcgacgcgcg cgcggtactc ttttcgccgt cgggccaccg gctctacatt gcgcgcgcgg
     2161 ccgcaccgct cctcgtgctc gaccggttcg cgaacactcg tttgcgggag atcgagctgc
     2221 ccggccccgc tcgggcgctc cggggcgaca tatacggcaa ctggcttctg gtgcagcctc
     2281 aggcgggcga ctcggtttgg gtgatcgaca tgggtagtgg caagtacctc ggtgccactg
     2341 ccgcgcgctg gaccgacgac ctgccggccg ttgcgcctgc ccacaccctg ctcgtccggc
     2401 gaggatccga cctcgtcgct ctcgatctgg ctgcgagcgg tttccctgag ctcgggcggg
     2461 tgaagggcgg ggcggccgat ttctggctgc cgctcgcctg gcatccggcc caggagaatg
     2521 agctcccact tgaggcggat tcggcggcgc tcgccgcctc cgataccggc cctgcccgac
     2581 caaccgtcta tctccaggta agtagctctc agaatccgac ctgggccagc gagctatcgg
     2641 acaagctccg ggctgccggc ctgccggccg cagtgctgag cccccggcgc tccggagaac
     2701 tcttccgcgt agtgctcggt ccatatgcga ctcgagagca ggcggaggag accgggcgca
     2761 aattgggtat gccctcgttc atcgtcaccg cacaggatca gtcgagtcaa taggggtcct
     2821 cctcgtcacc gggaacgccg gcatgaagct caccaagctc gaactttccg ggttcaaatc
     2881 gttcgccgat actgtgacgc tcaccttcga ggagggcgtg accgccatcg taggtccgaa
     2941 cggatgcggc aagtccaatg tctcggattc ggtacgctgg gtactcggcg agcagtcggc
     3001 tcggctcctt cggggtggca agatggagga tgtgatcttc cagggctcgg cggcccggcg
     3061 ccccgtgaac gtcaccgagg tctcgctctt cctcgacaac agtgatggtg acttgccgat
     3121 cgcataccgg gaggtcgtgg tcacccggcg tctctcacgc tcggggcaga gcgactatct
     3181 gctcaacggc tcgccggtgc gtctgcgcga cattcaggac ctgttgcgag gtaccggact
     3241 cggaagtgat gccggcgtcg tgatcgaggc caagatgatc gacctcctcc tgtcggaccg
     3301 ggccgaagag cggcggtccc tgttcgagga ggctgcaggc attggactct atcgcgaccg
     3361 gaagcacagc accgaacgcc ggctggaaga aaccgcggtc gacctccagc gggtggacga
     3421 cctgatctcg gaggtgcagt cccagatccg cagccttgcc cgccagcgtg gcaaggccga
     3481 acggcacgcg aagctgtccg aggagaagtt caccgtccag ctcaccctgg cgcggcgcct
     3541 gctcgatcgc ctggcggggg aagcggccgg gatggaagcg cggttcgccg agctggccga
     3601 actgctgcct gcggctcgcc agcgcttatc ggaaggagag gccggccgag aacagctggc
     3661 ccgcgggcgc gcggccgcgg aggcccagcg gaccgagatc acccggcgtc tcgctaccct
     3721 tcaggtggag atcggcagaa tcgacggcga cctggcgctc gcagccgagc ggctcgccaa
     3781 cgcgtcatcc cggcggctcc gggcagccga ggagcgggcc cacatggagc agcgagcatc
     3841 ccaggccgac atcgagcagg ctgccgcgga cgaagaccgg aacgccgcgg cggccgagca
     3901 cgagcggatt caggccgagc tgaccgggcg tgcggcggac gaagaggccg ttcgaaaccg
     3961 cctcggcgag caacgcgctg gtgtgcgccg cctggagcag gagctccaag cccaggctca
     4021 atcactcaag tcactcgaag gtgagcgaac cgcgctcgag ggtgagctgg cctccctgcg
     4081 cgagcgcgcg gcccaggccg cggctcagct ggcgagcctg cgctccgagc tggccgcctc
     4141 cgaacggcgc cgggacggcg ccatcgagcg agccggcttt ctcagtcagg aggccaagcg
     4201 tgccacggcc gctgctgagc gcgcccgtca tcttctggcc gaggcgcgcg agcgggaggc
     4261 gatgaaccgg gccgatcggc gccaggctga agagacactg gcgcagatgg cggcgcgccg
     4321 gcaggccctg gaggaattgg agcgggaccg ggtaggactg gctccagggg ccgcggcact
     4381 gctggccgca cgggacaggt tcgatggggg cgtgctcggt ccactcagcg attttgtcag
     4441 tacgggccag gaggacgccg agctggccga gcggctgctg ggagactgga tgcatgccgt
     4501 gctggtccgc agtgccgata cggtccggca agttcagacc tggcatgcgg gccagcagcc
     4561 cggcgcgctg gtactgctgc cgctggagcc cggtcccctt accatgtccg gtggacagcc
     4621 gctcgacaat cggctacggg tggaaggccc cgctgcgggg tgggtgcgcg ccgctctggc
     4681 tggatcggag attctcgacg acgcgggcca cgttctccgc cgagccagcg gagccatctt
     4741 cctgtccggc gcgggtgctc cctccggccc actgcggaga cgagcggagc tcgctacgct
     4801 cgtccaggag gtagctcagg ccgaggcggc ggtctcggtg gcggatgctg ctctccatca
     4861 gaccgccgag cagctgacgc agcgggaaca cagcctggca cagctgaccg cggccgccga
     4921 gcaggcgcga gatgcggaac ggcaggcgtt ggcggcacgg gaggacgtgc tccggctcgt
     4981 cggcaacctc acgagagaat ccgccgaatc ggaggcgcag cttcagcgtc tgagcgaccg
     5041 ggttgcccga tccgcccaac ggctggccga aatagacgag gcgctcgtgt ccggtgagct
     5101 tacccgcgga cgcctggaaa atgagctcgg catcggccgc acgctgctgg cggagctcga
     5161 agccgaacag gaagcggccc gggaacaacg cgcgcattgg caggtccaag aagcgcacct
     5221 ggccggcagc cttcgggcgg ccacggaccg gctggagcgg gccggtcagg tgcgtgcaga
     5281 ggccgagacg gccgcacact cccttgccaa cgagctgacg cagctcgagg ccgaaaccgg
     5341 cgcgctggcg ggtcagcagg ccgagtggct cgagtcacgc gcggagcggc aggctgcact
     5401 ggaggagctg gaggcggcca gcacccaggc cgaagccggc ctttcccggg ctgaggccac
     5461 gctgagcaga gcagagcgcg agctggccga tgcgcgcgct cagctcgaat cggccggcga
     5521 ggagagccac ggccttcagg tccggttgac cgaggcggcg ggaacccgcc gcagcatcgt
     5581 ggaacgggtc gaggccgagt ggcatcgacc cttcgaccgg ctgatggaat cagccgtgct
     5641 cctcgacctc gacctcgaga cgcttgaatc ggaggcctcg agaatcgtcg ccgcgctcga
     5701 ctcgatcggt ccggtcaacc cgctcgccgt ggaggagcat gcggaggaga ccaagcggct
     5761 cgagttcttg acctcgcagc gggatgatct ggtcagcgcc cggcagtcgc tgattcaggc
     5821 catccgggaa atcgacggaa ctgcccgtac tatgttcgta gagacgttca ccgccattca
     5881 ggccaacttc tccaaggtgt tccagactct cttcgggggc ggtgagtgcg agctcaggct
     5941 ggctagtccg gacgacccgc tcgagagcga gatcgacatc cacgccgcgc caagggggaa
     6001 gcgcacccag cgaattcact tactgtcctc cggagagcgg acgcttgtgg ccgtttcgct
     6061 gctcttcagc atctatctca ccaagccgag ccctttctgc ctcatggatg aggtcgatgc
     6121 acccctcgat gacgccaacg tggggcgctt tacccggctg ctcgaggagt tcaagagcga
     6181 cacccagttc ctggtgatca ctcataaccc gaggacgatg caggccgccg atgcggtcta
     6241 cggcgtcacg atgcaggagc cgggggtgtc cacgatcgtt ggagtgaggc tgggagagcg
     6301 ggagcatgtc tagggtctag cgatggcctg gcccttgcta cagactctgt aggagtccag
     6361 actcctcatc ccgagggaac cgagggacct actccgcggg tcaccaggac cgctagctag
     6421 gtccctcgct gcgctcggga tgaggtgcgg tgcggaa
//
LOCUS       DASYRV010000424         9328 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1958175, whole genome shotgun sequence.
ACCESSION   DASYRV010000424 DASYRV010000000
VERSION     DASYRV010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9328
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1958175"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..188)
                     /locus_tag="VGQ24_11425"
     CDS             complement(<1..188)
                     /locus_tag="VGQ24_11425"
                     /inference="COORDINATES: protein motif:HMM:NF016430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor"
                     /protein_id="HEV8455498.1"
                     /translation="MFRTALRLCRGNEADAEDLLQDSALRAFTAFEQLRDPTAARSWL
                     FTILSHTHLNRVRSARRRP"
     gene            complement(447..701)
                     /locus_tag="VGQ24_11430"
     CDS             complement(447..701)
                     /locus_tag="VGQ24_11430"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HEV8455499.1"
                     /translation="MNDLLLVIEVLSPFSARADRFTKRRLYQEAGVPLYWVVDPDERV
                     IEVWTADARLPAIEKERVTWWPAGTAAPFVLPLEELFRPI"
     gene            1193..2035
                     /locus_tag="VGQ24_11435"
     CDS             1193..2035
                     /locus_tag="VGQ24_11435"
                     /inference="COORDINATES: protein motif:HMM:NF021230.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TorF family putative porin"
                     /protein_id="HEV8455500.1"
                     /translation="MVPTSRRPAVIATAFLLAGAPAAAQVSVTADAGFFNAYVWRGVS
                     LTNQFVAQPDLYLTVPAGGGSAVLGGWSSMELGRYDGIGDLSEGGGVSSPDLTEIDLW
                     AEYGHPLGSNLAGTAGVLTYLFPNTAGLTNSANRTVEVYGKLQATGVPLAPKLAAWYD
                     VDKVKGAYLEASIAQGLSAIRGFPITFGALAGFSAGQGVNSSDPTQVANFADDGFTHL
                     DLSASGALAAGPVTIAPTVHFYVLNDEFTKITRLGTTRDVKAWAGLSLTWSRPLTNVP
                     TTSE"
     gene            2355..3062
                     /locus_tag="VGQ24_11440"
     CDS             2355..3062
                     /locus_tag="VGQ24_11440"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEV8455501.1"
                     /translation="MRFTLLESDRSFFQPAECAFVSILAHAGLVWFALSATGGGGQIP
                     TDQREARVFFLLPPDRVDERSRQSEILQWGKLGSDLENGKLLTQPGEGWPIRERAYGA
                     RRHGGRTGARGQLPFGPPPVFVPDTAFSVLEVDEMVERYESSAAPIYPRDLIALGVEG
                     SVQAIYIVDSTGLVDTTTVEVVRSDDLRFTESVLTALGQMRFRPAKRGGKTVRQLVQQ
                     QFRFRIAPASQITKQMS"
     gene            complement(3485..4009)
                     /locus_tag="VGQ24_11445"
     CDS             complement(3485..4009)
                     /locus_tag="VGQ24_11445"
                     /inference="COORDINATES: protein motif:HMM:NF018663.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEV8455502.1"
                     /translation="MASIRAITPCLWFDDQAEEAARYYTGIFKNSRIGKISRYGEAGR
                     EVTHKPPGSVMMVAFELDGQPFSALNGGPLFQFNEAISFVIPCKDQKEIDFYWDKLSQ
                     GGDPKAQQCGWLKDKYGVSWQVVPAVLDEMVGDPNSEKSQRAMEAMLTMKKIDIATLE
                     RAYAEPTRETAGRR"
     gene            4469..5536
                     /gene="glk"
                     /locus_tag="VGQ24_11450"
     CDS             4469..5536
                     /gene="glk"
                     /locus_tag="VGQ24_11450"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF014715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HEV8455503.1"
                     /translation="MTASLDDTRPTAGPSALARGNGLLLAGDIGGTKTALAVYSAERG
                     PRAPLLEAEFPSAKYASLGVMVREVLAGADLPIEQACFAVAGPVIAGRSKFSNLPWLL
                     AEDELAAELQLRSVHLLNDLEAIALAMSVVRPGDLHPLNVGEPLAGGALAVIAPGTGL
                     GEAFLTWDGTRYRAFPSEGGHADFAPTTELQAGLLVHLLRRFDHVSVERVCSGPGLVN
                     IYQYLRESGYAPESAELARGLAAGEDGPRLIGEAALRRPDPDPLSRAAIELFVSILGA
                     EAGNLALKVLGTGGVYLAGGIPKRILPALGEGRFMRAFVAKGRLGEVLARVPVHVVTL
                     RAALLGAALRGLELAAATPAD"
     gene            5552..6568
                     /gene="gnd"
                     /locus_tag="VGQ24_11455"
     CDS             5552..6568
                     /gene="gnd"
                     /locus_tag="VGQ24_11455"
                     /inference="COORDINATES: protein motif:HMM:TIGR00872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating 6-phosphogluconate
                     dehydrogenase"
                     /protein_id="HEV8455504.1"
                     /translation="MQLGMIGLGRMGGNMVRRLMRAGHECVVYDVHPPAVKALAGEGA
                     TGTDSLKTFVAALEPPRAVWLMVPAALVDQELAALVPRLGSGDIVIDGGNSYYHDDIR
                     RAAELKASGLRYVDVGTSGGVFGLERGYCLMIGGERPVVEHLDPVFAALAPGAGAAPP
                     TPGRQSTTGTAERGYLHCGPAGAGHFVKMVHNGIEYGLMAAYAEGLNILHHAGAGLRA
                     QEADAETTPLRHPEHYQYQLDIAEITELWRRGSVISSWLLDLTARALLESHDLSGFTG
                     RVSDSGEGRWTIAAAVDESVPTPVLSAALFQRFSSRGEGDFANKLLSALRYQFGGHQE
                     KGPG"
     gene            6579..7967
                     /gene="zwf"
                     /locus_tag="VGQ24_11460"
     CDS             6579..7967
                     /gene="zwf"
                     /locus_tag="VGQ24_11460"
                     /inference="COORDINATES: protein motif:HMM:NF009492.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEV8455505.1"
                     /translation="MAQLLSDALVVFGVTGDLAFKQIFPALQAMVRHGHLNVPVLGVA
                     RSNWSLEQLRARARESVEQHGGIDSSAFQKLCGLLRFVGGNYEDPGTYRRLKEALAGC
                     QRPLHYLAIPPSLFATVVAGLARVGAASNARVVLEKPFGRDLASAEALNATLDEFFPE
                     SAIFRIDHYLGKEPVQNLLYYRFANSFLEPIWNRNYVERVQITMAERFGVEGRGRFYE
                     EAGAIRDVVQNHLLQVASLLAMEAPSGRGTEAIRDEKTQAFRSMRPLEPSDVVRGQFR
                     GYRQEEGVAADSDVETFAAVRLQVDSWRWAGVPFYIRAGKCLPVTATEVLVELKRPPL
                     ALFPDCAAAPPNRFRFRLSPQVVLSLGARAKLPGEAMRGEDIELIACHDRTEEMAPYE
                     RLLGDAMRGDQMLFAREDSVEEAWRVVEPVLGSATPLFQYESGTWGPAEADRLLQNGA
                     GWFNPEQDWACG"
     gene            8061..8771
                     /locus_tag="VGQ24_11465"
     CDS             8061..8771
                     /locus_tag="VGQ24_11465"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEV8455506.1"
                     /translation="MRSLRSELVFLFDVDNTLLDNDRVIADLRRYLMREVGAGSAERY
                     FKIFEQLRAELGYADYLGALQRYRVTYPRDSGLLAVSAFLVNYPFANRLFPGSLDVLE
                     QLGAFGPTVILTDGDVVFQPRKIERSGLGAAVEDRILVYIHKERELDDVAQRFPAEHY
                     VLVDDKLHILAAVKEAWGPRVTTVFVRQGHYAHDPDILASNPPADVSVDRIGDLLEYD
                     IPTLLGAATAATGGRRES"
     gene            8768..>9328
                     /locus_tag="VGQ24_11470"
     CDS             8768..>9328
                     /locus_tag="VGQ24_11470"
                     /inference="COORDINATES: protein motif:HMM:NF013116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase family protein"
                     /protein_id="HEV8455507.1"
                     /translation="MNPTQRLHDLGQSLWLDNITREIIQNGTLERYIKELSVTGLTSN
                     PTIFEHAIRSGGWYDDSIHAKTMAGLSGEALFFELAGEDLTQAADLFRPIHRATGGTD
                     GWASLEVSPLLAHDTARTIEQVKSLHRRLERPNLFIKIPGTPEGLPAIEESIFAGVPI
                     NVTLLFSREQYLAAAGAYQRGVARRIA"
BASE COUNT         1500 a         3169 c         3012 g         1647 t
ORIGIN      
        1 ggccgccgtc gcgccgaccg cacccggttg agatgggtgt gggagaggat ggtgaataac
       61 caggaacgtg ccgccgtcgg atccctcaac tgctcgaaag cggtgaaagc gcggagcgcc
      121 gagtcctgga gcagatcctc cgcgtcggcc tcattcccgc gacagagccg aagcgccgtc
      181 cggaacaagg cgtccagatg ctcggcgaag agttcttcga atgcccgagc gggtcgggta
      241 cgtcgcggca gtcggagctc cttgcggaag gctatcggct actggcttac gccttggagc
      301 ttacctacag ccaatagcca atagcgaata gccatctacc tagacactcc aggaggtcaa
      361 atccatccct cccgcgtacc cgaagggtga cgcggcggta gaacctgcgc cctcacaatg
      421 attgaacgcg ggccagactg agtcgatcag atgggccgga acagttcctc gaggggaagc
      481 acaaacggag ctgcggtacc tgcaggccac caggtgacgc gctccttctc tattgcgggc
      541 agccgcgcgt ccgcggtcca gacctcgatt acccgctcgt ccggatccac gacccagtac
      601 agcgggacgc cggcttcctg gtagagccgc cgcttggtga aacggtcggc cctcgccgag
      661 aacggactca gcacttctat cacaagcagg aggtcgttca tcgggctcag gacaggctcg
      721 cttgcgctct cgcgggatga ggtatgctct tttacccgct taccgcttac cgcttaccgc
      781 ttaccgctta ccgcttaccg ctcaccgctt accaccatgc cgccccctac ccgccttacc
      841 gcgccgcggc tgtcaagcag ttcgtgcaag atgtgcgatc aaataggcct cgaagacgtg
      901 ctatcggcta caaaagtgta ggatgtccgg cagatcctgc agaatatgca caaaaccatt
      961 gacaccgatg caacaccgat gtatcctggt ctgagcctgt tctgtttacc tcaacccggc
     1021 cagtctcgat gacgccagcg cacctgcacc gaaaccgtca ccctttccct ccccactcgc
     1081 ggcgccgatg acgcggcctt tttggcttgc tccccatctc atgaagcatc acggcccgcc
     1141 gctccaggtg ggccgaatcg tttctggaac cccctttccc gtgaggagta ccatggtccc
     1201 gacatcccga cgtcccgccg tcatcgcgac agccttcctc ctggccggcg ctccggccgc
     1261 cgcgcaagtg agcgtcaccg ccgatgccgg gttcttcaac gcctacgtct ggcgcggcgt
     1321 gagtctcacc aatcagttcg tcgcccaacc cgacctgtat ctgaccgttc ccgccggcgg
     1381 cgggtccgcc gtgctcggcg gctggagcag catggaactg gggcgctacg acggcatcgg
     1441 cgatctgagc gagggcggcg gcgtctcctc gcccgacctg accgagatcg atctctgggc
     1501 cgagtacggt cacccgctcg gctccaacct cgccggcacc gcaggcgtgc tgacgtattt
     1561 attccccaac acggcgggcc tcaccaacag tgccaaccgc accgtcgagg tgtacggcaa
     1621 gctccaggcg accggagtcc cgctcgcgcc caagctcgcg gcctggtacg acgtggataa
     1681 ggtgaagggc gcctacctcg aggccagtat cgcccagggg ctgagcgcga ttcgcggttt
     1741 cccaatcacc ttcggcgcgt tggccggatt cagcgcgggg cagggggtga acagctcgga
     1801 tcccactcag gtcgccaact tcgccgacga cgggttcact catctggacc tgtcggcctc
     1861 cggcgcgctg gcggcgggac cggtgaccat cgctcccacg gtgcacttct acgtgctgaa
     1921 cgacgaattc accaagatca cccgtctggg cacgacccgg gacgtgaagg cgtgggccgg
     1981 cctcagcctt acctggtccc ggccgctgac caacgtgccc acgacgtcgg agtagtgggc
     2041 ggactggcaa ctgcggcggt agatactgcg gcggtagggc ggtacggcgg taggttgtca
     2101 ccctgacccc gaccctgagc ggagcgaagg ggagcgggga gggggccgaa actcaccacg
     2161 cttgccgaac tgatcggcga tcccgaacgt accgccttac cgccttaccg ccttaccgcc
     2221 ttaccgcctt accgccttac cgccttaccg ccttaccgcc gcccgtccgc cttcctgtct
     2281 tgccgaccgg cggaagttcg tcatatatgt aagatcgacg tttctgagcc tcgattcgtc
     2341 tgacggcttt ggtcatgcgc ttcaccctcc tcgaatccga ccggtccttc ttccaacccg
     2401 cggagtgtgc cttcgtgagc atcctggcgc acgccgggct ggtgtggttt gccctgagcg
     2461 cgaccggagg cggcgggcag attccgaccg accagcgcga ggccagagtg ttctttctcc
     2521 taccgcctga ccgggtggac gagcggtcgc ggcaatccga aatcctccag tggggcaagc
     2581 tcggcagcga cctcgagaac gggaagcttc tcacccagcc gggcgagggt tggcccattc
     2641 gggaacgggc gtatggcgcc cgcaggcacg gcggccggac cggcgcccgg ggccagctgc
     2701 cgttcggtcc gccgcccgtt ttcgtccccg acaccgcctt cagcgtgctc gaggtggacg
     2761 agatggtgga gcgctacgag tcgagcgcgg caccgatcta tccccgtgat ctgatcgccc
     2821 tcggagtgga aggctcagtc caggcgatct acatcgtcga cagcacgggc ctggtggaca
     2881 cgaccacagt cgaggtggtg cgcagcgacg atctccgctt tacggaatcg gtcctcaccg
     2941 cgctggggca gatgcgtttc cggccggcca agcgcggggg gaagacggtc cgccagctgg
     3001 tccagcaaca gttccgcttc cgcatcgctc ccgcgtccca gatcaccaag cagatgagct
     3061 aagggcacgg cacgggcgga aagcccgtac gtaactcgcc gacgcccggc tgcgccgggt
     3121 cggtgcatga ttgatcgcgc tcgatgcgcg cccggcatga aatagggcca ccctcatggg
     3181 tggccctctt ggagtcggcg gtcctccgga ccacggatcc cggcggaatg agagtcgcct
     3241 acaatgtggg gtgaacggag ctggattgat ctcctgaggc tgagcgcaag gggtgtggtg
     3301 gggggaagtc ggcgcttgaa gccgaagggg atcggtccag ctccgttccg gagagcttgt
     3361 gctgagcgca gcgaagggtg aagcggcggt aggtgaagcg gcggtaggtc cttcaccgtt
     3421 cacctaccgc aacaccccta ccgccgtacc gccgctgtct ctaccgccgc ttcactctac
     3481 cgccctaccg ccttcctgcc gtctccctcg tgggctccgc gtaggcccgc tccagggtcg
     3541 cgatgtcgat cttcttcatc gtcagcatcg cctccatggc tcgctgggac ttctcggaat
     3601 tcgggtctcc caccatctca tcgagcacgg ccggcaccac ctgccacgat acgccgtact
     3661 tgtccttgag ccagccacac tgctgtgcct tcggatcccc accctgcgac agcttgtccc
     3721 agtagaagtc gatttccttc tggtccttgc aggggatgac gaaggagatc gcctcgttga
     3781 actggaacag cgggccgccg ttcagcgcgc tgaagggctg gccgtcgagt tcgaaggcga
     3841 ccatcatcac gctgccgggc ggtttgtggg tgacttcgcg tcccgcctcg ccgtagcgcg
     3901 agatctttcc aatcctcgag ttcttgaaga ttccggtata gtacctggct gcctcttcgg
     3961 cctgatcgtc gaaccagagg catggggtga ttgctcgaat gcttgccatt aatcctcctc
     4021 cgttgttggc gtggcagcgc gcgccgggct cgggtcgcct gcacatctct cccttgaatg
     4081 cgaggcgacg acaatagagt tgcgcgccag ctccggctgt gacgtgggcc actgacaggc
     4141 cctaaactca agccggtcat cgcgagcctg cctaagcagc tcggcgtgga ccacgcccgg
     4201 ctgcgccggg ccgatcatga ttgatcgcgc tcgatgcgcg cccggccctt acgggccggg
     4261 ctcttggttt ggcgcggtcc gctggaccgc ggacgcttcg tttccgggcg aatatcctgg
     4321 ccaatggttg cctgatgaac tcctacggcg ccatggttac cttcgccgcc gtaccgccgt
     4381 accgccgtac cgccgtaccg ccgtaccgcc gtaccgccgt accgccgtac cgccgtaccg
     4441 ccgtaccgcc gtgctacatt ccgaacagat gactgcttcg ctcgacgaca cccgccccac
     4501 tgccggcccc tccgccctgg cgaggggaaa cggcctgctg ctcgcggggg acatcggtgg
     4561 gactaagacc gccctcgccg tgtactccgc cgagcgaggg ccccgcgccc cgctgctcga
     4621 ggccgaattt cccagcgcca agtacgcatc gctcggggtg atggtccgcg aggtcctggc
     4681 aggggccgat cttccgatcg agcaggcctg cttcgccgtg gccggaccgg tgatcgccgg
     4741 ccgctccaag ttcagcaacc tcccctggct tctcgcggag gacgagctgg cggcggagtt
     4801 gcagcttcgc tcggtccatc tgctgaatga tctggaagcc atcgccctag cgatgtcggt
     4861 cgtccggccc ggcgaccttc acccgctcaa cgtcggcgag ccgctggccg gcggcgcgct
     4921 ggcggtgatc gccccgggca ccggactggg ggaagccttc ctcacctggg acggcacccg
     4981 ctatcgggca tttccgtctg agggcggcca tgccgacttc gcccccacca ccgagctgca
     5041 ggccgggctg ctcgtccatc tcttgcgacg gttcgaccac gtcagcgtag agcgagtctg
     5101 ctccggcccc ggcctcgtca acatctacca gtatctgcgg gaatctggct atgcccccga
     5161 gtcggccgag ctagcccgcg ggctcgcggc cggcgaggac gggcctcggc tcatcggcga
     5221 agcggcgctg cgccggccgg acccggaccc gctgagccgc gccgccatcg agctctttgt
     5281 ctcgatcctc ggggcagagg ccggcaacct cgccttgaag gtcctgggaa ccggtggtgt
     5341 ctacctggcg ggcggcattc ccaaacgaat tctccccgcg ctgggcgaag gccggttcat
     5401 gcgcgcgttc gtcgccaaag gacgtttggg cgaggtgctg gcgcgagtgc cggtccatgt
     5461 ggtaactctg cgtgccgcgc tcctcggcgc cgcgctgcgc ggcctcgagc tcgcggccgc
     5521 cacccccgcg gattgagaga gcagggtcgc gatgcagctc ggcatgatcg ggttgggacg
     5581 gatgggcggc aacatggtcc gccggctgat gcgggcggga cacgagtgtg tggtctacga
     5641 cgttcacccc ccggccgtga aggcgctggc cggcgagggg gccaccggca ccgactcgct
     5701 gaaaacgttc gtggcagcac tcgagccgcc ccgggcggtg tggctgatgg tgcccgcggc
     5761 cctggtggat caggagctcg cggccctcgt tccgcggctc ggctcgggcg acatcgtcat
     5821 cgacggcggc aattcgtact accacgacga catccgtcgc gcggcggagc tgaaggcgag
     5881 cggcctccgt tacgtggatg tggggaccag cggcggcgtc tttgggctgg aacgcggcta
     5941 ctgcctgatg atcggcggcg agagaccggt agtcgagcat ctcgacccgg tgttcgcggc
     6001 gctcgctccc ggggccggtg ccgcgccgcc cacccccggt cgccagtcca ccactggaac
     6061 cgcagagcga ggctacctcc actgcggccc cgcgggtgca gggcatttcg tgaagatggt
     6121 tcataacggg atcgagtatg ggctcatggc ggcctacgcg gaggggctca atatcctgca
     6181 ccacgcaggc gcagggctcc gcgcccagga ggcagatgcg gagaccacgc cgctccgcca
     6241 ccccgagcac taccaatacc agctggatat tgccgagatc acggagctgt ggcggcgcgg
     6301 cagcgtcatc agctcctggc tgctggatct caccgcccgg gccctgctcg agagccacga
     6361 tctgtcgggt tttaccggtc gggtgtctga ctcgggcgag ggccgctgga ccattgccgc
     6421 cgcggtcgac gagtccgtcc ccaccccggt gttgagtgcc gcgctgttcc agcggttcag
     6481 ctcccgtggg gagggcgact tcgccaacaa gctcctctcc gcgctccgct accagttcgg
     6541 cggccaccag gagaagggcc ccggctagga agatcgagat ggcgcaactc ctctccgacg
     6601 cgctcgtcgt cttcggtgtc accggcgacc tggccttcaa gcagatcttc cccgcgctgc
     6661 aggcgatggt ccggcacggt cacctgaacg tgccggtcct gggcgtggcc cgctccaatt
     6721 ggagtctcga gcagctccgg gcccgggccc gcgagagtgt ggagcaacac ggtgggatcg
     6781 actcttcggc gtttcagaag ctgtgcgggc tgctccggtt cgtgggcgga aactatgaag
     6841 accctggcac ctatcggcga ttgaaagagg cgctggccgg ctgccaacgg ccgctccact
     6901 atctggccat cccgccgagc ctgttcgcca ccgtggtcgc ggggctcgcc cgggtgggcg
     6961 ccgcctccaa cgcccgggtc gtcttggaga agcccttcgg ccgcgacctc gcctcggccg
     7021 aggcgctcaa cgcgacgctg gacgagttct tccccgagtc ggccatcttc cgcatcgacc
     7081 actacctcgg caaggagccg gtgcagaacc ttctgtatta ccggttcgcc aactccttcc
     7141 tggagccgat ctggaaccgc aactacgtcg agcgggtcca gatcaccatg gcggagcgct
     7201 tcggcgtcga ggggcgcggg cgcttctacg aggaggcggg cgcaatccgc gacgtggtgc
     7261 agaatcacct gctccaggtg gcgagtctcc tcgcgatgga ggcgccctcc gggaggggca
     7321 ccgaggcaat ccgggacgag aagacgcagg cgtttcggtc catgcgtccc ctcgagccat
     7381 ccgatgtcgt gcgaggacag ttccggggct atcggcagga ggagggagtg gctgccgatt
     7441 ccgacgtcga aaccttcgcc gcggtgcggc tacaggtgga ttcgtggcgc tgggccgggg
     7501 tacccttcta catccgcgcc ggcaagtgcc tgccggtcac ggccacggag gtgctcgtcg
     7561 agctcaagcg gccgccgctg gcgctcttcc ccgactgtgc cgcggcgccg ccgaatcgct
     7621 ttcgcttccg gctcagtccc caggtggtgc tctcgctcgg cgccagggcc aagctgccgg
     7681 gcgaggcgat gcggggagag gatatcgagc tcatcgcctg ccacgaccgg accgaggaga
     7741 tggcgcccta cgagcggttg ctgggcgacg cgatgcgggg agatcagatg ctctttgccc
     7801 gggaggactc ggtcgaggag gcgtggcggg tggtggagcc ggtactggga agcgcgaccc
     7861 cgctcttcca atacgagagc ggcacctggg gacccgccga ggccgatcga ttgctccaga
     7921 acggggccgg atggttcaat cccgagcagg attgggcctg cggatgacgt attctgttca
     7981 gatgatcacc atcggagaag gattcaccac aggtgtgtcc ttgagaccct ctgtggtgat
     8041 ttattaaaga gatcaatcac atgcgttcac tccggagcga gctggtcttc ctgttcgacg
     8101 tggacaacac gctgctcgac aacgatcggg tcattgcgga cctcaggcgc tacctgatgc
     8161 gcgaggtcgg tgccggaagc gcggaacgtt atttcaagat cttcgagcag ctgcgggcgg
     8221 agttgggcta cgccgactac ctgggcgccc tccagcggta tcgggtgacg tatccccgtg
     8281 attccggcct gctcgccgtt tcggccttcc tggtgaacta ccccttcgcc aatcgtctct
     8341 tccccggctc gctcgacgtg ctggagcagc tcggggcgtt cggcccgacc gtcatcctca
     8401 ccgacggcga tgtggtgttc cagccgcgca agatcgagcg atcggggctg ggcgccgcgg
     8461 tggaggaccg gatcctggtc tacattcaca aggagcggga gctggacgac gttgcccagc
     8521 gcttccccgc ggagcactac gtgctggtgg acgacaagct ccatatcctg gccgcggtca
     8581 aggaggcctg ggggccgcgg gtcaccaccg tcttcgtccg tcagggacac tatgcccacg
     8641 acccggacat tctggcgagc aacccaccgg ccgacgtgag cgtcgatcgg atcggcgacc
     8701 tgctcgagta cgacataccc acactgctcg gcgccgccac cgcggcaact ggcggtagga
     8761 gagaatcatg aacccaaccc aacgactcca tgacctgggc cagagtctct ggctcgacaa
     8821 catcacccgg gagatcatcc agaacggcac gctcgagcgt tacatcaagg agctgtccgt
     8881 caccgggctc acctccaatc cgacgatctt cgagcacgcc atccggagcg gcggctggta
     8941 tgacgactcg attcatgcga agaccatggc cggcctctcc ggcgaggcgc tcttcttcga
     9001 gctggccggg gaggatctga cccaggccgc cgatctcttc cggccgattc accgggcgac
     9061 cggcggtacc gacggctggg cctcgctcga ggtgtcgccg cttctcgccc atgacacggc
     9121 gcgcactatc gagcaggtga agtcgctcca ccgtcgcctc gaacggccca atctgttcat
     9181 caagattccg ggaaccccgg agggcctccc ggccatcgag gaatcgatct tcgccggcgt
     9241 tccgattaat gtcacgctcc tcttctcccg ggagcagtat ctggcggcgg ccggggcgta
     9301 ccagcgcggc gtcgcgcgcc ggatcgcg
//
LOCUS       DASYRV010000425         2819 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1010274, whole genome shotgun sequence.
ACCESSION   DASYRV010000425 DASYRV010000000
VERSION     DASYRV010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2819
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1010274"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2090
                     /locus_tag="VGQ24_11475"
     CDS             <1..2090
                     /locus_tag="VGQ24_11475"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF004349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEV8455508.1"
                     /translation="HLWHLRYPLADGSEQVTVATTRPETMLGDTAVAVHPDDERYRGL
                     IGRDIRLPLVDRLIPIVADDAVDPAFGSGAVKVTPAHDPADFDIGRRHSLPSIDVMTP
                     EARISLAAPDRFQGLDRYEARRQVVAELQAAGLLDRVETHQHAVGHCYRCNTVIEPRL
                     SDQWFVRMEPLARPALDAYRDGTLRFVPERRGDDYSSWLEGIRDWCISRQLWWGHRIP
                     VWYCDATGCGKISVSRHDLNACPGCGGPVRQDEDVLDTWFSSWLVPFSSLGWPARTPD
                     LATYYPGHTMVSAPEILFFWVARMIMSGLHFMGRVPYTDIYLHGTVRDTQHRKMSKSL
                     GNGIDPLEVVEKYGADALRYSLISGMSVGTDVILDPNDLEASFAAGRNFANKLWNAGR
                     FILSNLPGPTRPLAGSHPGVIGRDELTLADRWMIARCDATVVEATEAYERFRLNEAAA
                     AAYRFIWSDLADWYIEQAKPRLYGDQPGGDVARAVVAQTFEVALRLLHPVMPFITEAL
                     WRRFPGRSATASISVAPWPKPDARADDPAAIRDFGVVQELVGAIRAIRAEYGIPPGQA
                     VRAAVSGESPATVSALEQERGTITRLAKLSQLTLGESRERVGGHAVLSDGTAVFVPLG
                     EAIDVGRECGRLSSEVDRLARLVQSQEQKLGNQQFVSRAPTEVVERERQKLTTWKEQR
                     EVLTRKRERLGCG"
     gene            2213..>2819
                     /locus_tag="VGQ24_11480"
     CDS             2213..>2819
                     /locus_tag="VGQ24_11480"
                     /inference="COORDINATES: protein motif:HMM:NF024603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEV8455509.1"
                     /translation="MEPPPGGPPDATPPRLIATRPDSFAVLRPFRGVAEFQFDEVISE
                     GGTPNRGEGTGGLERLVILSPSTRVPEVSWKRSRITVRPREGWRPNRVYRVELLPGVT
                     DLRNNQSREGAVLTFTTGAPRPTNTLQGQIVDWGTSRPAGNALVIATLLPDSLPYRGV
                     ADSGGRFSLGPLPSGDYLVTGVLDENRNQQQDTREAYATARL"
BASE COUNT          446 a          916 c          973 g          484 t
ORIGIN      
        1 gccacctctg gcacctccgg tatcccctgg ctgacggcag cgaacaggtg acagtcgcga
       61 cgacccggcc ggagacgatg ttgggtgata cggcggtggc ggtccatccc gacgatgaac
      121 ggtatcgcgg cctgataggc cgcgacatcc gccttcctct ggtcgaccgg ctcatcccca
      181 tcgtggccga cgatgcggtg gaccctgcct tcggatcggg tgcggtcaag gtcactccgg
      241 cgcatgaccc cgccgacttc gacatcggcc gcaggcattc actgccgagc atcgacgtga
      301 tgacgccgga ggcccggatc agtttggctg ctccggaccg gtttcagggg ctggaccgct
      361 acgaggcgcg ccgccaggta gtcgccgaac tccaggcggc cgggctgctc gaccgggtcg
      421 agacgcatca acacgcggtg gggcactgct atcgctgcaa cacggtgatt gagccgcgcc
      481 tctccgacca atggttcgtg cgcatggagc cgctggcacg gcctgcgctc gatgcctatc
      541 gagacggcac cctgcgcttc gtccccgagc gccggggcga tgactactca tcctggctcg
      601 agggcatccg ggactggtgc atctcccggc agctctggtg gggccaccgc ataccggtgt
      661 ggtactgcga tgccaccggt tgcggcaaga tcagcgtgag ccggcatgat ctgaacgcct
      721 gtcccgggtg tggcggtccc gtgcgccagg acgaggacgt gctggatacc tggttctcct
      781 cctggctggt gccgttctcc agcttggggt ggcccgcccg cacgccggat ctcgccacct
      841 actatcccgg tcacacgatg gtgtcggcac cggagattct ctttttctgg gtcgcgcgga
      901 tgatcatgtc cgggctgcat ttcatgggcc gggtgccata taccgacatt tacctgcacg
      961 ggacggtccg cgacacgcag caccgaaaaa tgtccaagtc gttgggcaac gggatcgatc
     1021 cgctcgaggt cgtggaaaaa tacggagcgg acgcgctccg ctactcactc atctcgggaa
     1081 tgtcggtggg gaccgacgtt atcctcgacc cgaacgacct cgaagcgtcg tttgccgccg
     1141 ggcgcaattt cgccaacaag ctctggaatg ctgggcgctt catcctgtcg aatctccccg
     1201 ggcctactcg cccactcgcg gggtctcacc ccggcgtgat cggacgcgac gagctcacgc
     1261 tcgccgatcg atggatgatc gcccggtgtg atgccaccgt ggtggaggcg accgaggcct
     1321 acgaacgctt ccgcttgaat gaggcggctg cggcggcgta ccggttcatc tggagcgatc
     1381 tggccgactg gtacatcgag caggccaagc cccggctcta tggcgaccaa cccggcgggg
     1441 acgtggcgcg cgcggtcgtg gcacagacgt tcgaggtcgc cttacgcttg ctccaccccg
     1501 tcatgccgtt catcaccgaa gcgctatggc ggcgcttccc cggtcgctcg gccacggcct
     1561 cgatctcggt cgcaccctgg ccaaagccgg atgcacgggc ggatgatccg gccgccatcc
     1621 gcgattttgg agtggtgcag gagctggtcg gggcgattcg cgcgatccgc gcggagtacg
     1681 gcatcccacc gggccaggcg gtgcgcgctg ccgtgagtgg cgagagcccg gcgacggtct
     1741 cagcgctgga acaggagcgc ggaaccatca ctcggctggc caagctgtcc caactcactc
     1801 tcggggaaag ccgggaacgg gtcggtggtc acgcagtgct ctcagacggg accgccgtgt
     1861 tcgtccccct gggggaggct atcgacgtgg gacgcgagtg cggccggttg agctccgagg
     1921 tggaccggct ggcccgattg gtccagtctc aggagcagaa gctcggtaac cagcagtttg
     1981 tctcccgggc tccgacggag gtggtggagc gggagcgcca gaagctgaca acctggaagg
     2041 aacagcgtga ggtgctgacc cggaagcggg agcggctggg gtgcgggtga ggcggggcgg
     2101 cggggccgcg gggcggcggg gcagtgatac attctcacac ctgggatcac gctggggtgc
     2161 tgttgcttcc ctgctgccca tctgcgccgc tgccctgctt tcctgcgccc gcatggagcc
     2221 gccgcccggg ggtccgcccg atgcgacgcc cccgcggctg atcgccacca gacccgattc
     2281 gtttgccgtg ctgcggccct tccgcggcgt ggcggagttt cagtttgacg aggtgatctc
     2341 ggaggggggg acacctaatc ggggtgaagg caccggtgga ctcgagaggc tggtcatcct
     2401 ctcgccgagt acgcgggtgc ccgaggtcag ctggaagcgc agccggatca cggtgcggcc
     2461 tcgggagggc tggcggccca atcgggtgta ccgggtagaa ctccttccgg gtgtgaccga
     2521 tctccgaaac aatcagagcc gggaaggcgc ggtgcttacc ttcaccacgg gtgctcccag
     2581 gccgacgaac acgctccagg gacagatcgt ggactgggga accagccgcc cggcgggcaa
     2641 tgccctggtt atcgcaacgc tgctccccga cagccttccc taccggggag ttgctgattc
     2701 cggcggacgg ttttccctgg gaccgctgcc cagcggagac tatctcgtga ccggcgtgct
     2761 tgacgaaaac cgcaaccagc agcaggacac gagggaagcc tatgccacgg cccggctcc
//
LOCUS       DASYRV010000426         2693 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2997324, whole genome shotgun sequence.
ACCESSION   DASYRV010000426 DASYRV010000000
VERSION     DASYRV010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2693
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2997324"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..777
                     /locus_tag="VGQ24_11485"
     CDS             <1..777
                     /locus_tag="VGQ24_11485"
                     /inference="COORDINATES: protein motif:HMM:NF037084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455510.1"
                     /translation="TGNKFEFRAVGSSASIAWPNTVLNTIVAESLDHVAGELEKAVGA
                     KPTAAKLQLGVIAVLKRLIKDHKRVIFDGDNYSEEWHAEAERRGLPNLRDSVDAFGVL
                     RAKKNLDLFKKYGVLSPAEHDSRTHIAIEKYIKQVGIEAETMVSMARNQILPAALKHQ
                     QQMAETIAATKAAGVDCADTTTALRSFVELVTRLRGTTVAVERAAAHHDADPTKHAAQ
                     ISQELKPAMAELRVVVDTLETLVAADLWPLPTYRDLLFLK"
     gene            complement(862..1320)
                     /locus_tag="VGQ24_11490"
     CDS             complement(862..1320)
                     /locus_tag="VGQ24_11490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455511.1"
                     /translation="MPSPLVVDALREQLVRVLEWYRHERPVFGWGVVLHRRNERGKLR
                     FGAVTPGGESLLLSQPLLSALAEGPCWLDGAVRVRLACRQVTQCHPWLDALNRPDRPP
                     LVEAMAVCFDPDASAAECEAFQAMAGTLTPATLPSELFLLLRKRCTGWPL"
     gene            1456..>2693
                     /locus_tag="VGQ24_11495"
     CDS             1456..>2693
                     /locus_tag="VGQ24_11495"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEV8455512.1"
                     /translation="MSDHRYPLSHVLYRKLTRRYPRIVRGDGCYLYDDQGRRYLDGCG
                     GAYVVNVGHGVSEIAEALACQARTLAYVSGTTFTHDAVEEFAAEVARLSPGDLDLVYP
                     LASGSEAVEAGLKLARQYWVESARPAKHKILAFAPSYHGNTLLALSASSREQYQSYYR
                     EWLTRIVRVPAPYPFRCACRGTPPLCPACSGEAIEQAIIHEGADTVAALIGEPVGGSS
                     TGASVPPPDYWPRVRAICDRHEVLLIADEVLTGAGRTGTWSALEPYGVVPDVMILGKG
                     ISGGYAPLSAVVAPRRIVDVVAHGSGTFMHAQTFSHHATLCAAGIATLKYLGQHRLIE
                     RCAQMGQVLHERLQALRTLQWVGDVRGRGLLAGIEFVEDRRTSRPFPTAARFAESFAA
                     VALELGLVVWSNAGQLEDGTG"
BASE COUNT          477 a          864 c          889 g          463 t
ORIGIN      
        1 accgggaaca agttcgagtt ccgggcagtg ggctcgagtg cgagcattgc ctggccgaac
       61 acggtgctga acaccatcgt ggcggagtcg ctggatcatg tggcgggaga gctcgagaag
      121 gcggtaggag caaagcccac ggcagccaag ctgcagctgg gggtgatcgc ggtattgaag
      181 cgcctgatca aggaccacaa gcgcgtgatc ttcgacggtg acaactattc ggaggagtgg
      241 cacgccgaag cggagcggcg cggactaccg aacctcagag actcagtcga cgccttcggg
      301 gtgcttcgag ccaagaaaaa cctggacctg ttcaagaaat atggggtgct gagtccggcg
      361 gagcacgact cgcgcaccca tatcgccatc gagaagtaca tcaagcaggt cggcatcgag
      421 gcagagacca tggtctccat ggcccgcaat cagatcctcc ccgccgccct caagcaccag
      481 cagcagatgg cggaaaccat agcagctacc aaggcggccg gcgttgactg tgcggacacg
      541 actaccgccc tccggagctt cgtcgagctc gtcaccaggc tccggggcac gaccgtggcg
      601 gtcgagcggg ccgcggccca ccacgacgcg gatcccacca agcacgctgc ccagatcagc
      661 caggagctca agccggccat ggccgagctg cgggtagtag tggatacgct cgagaccctg
      721 gtggcggcgg atctctggcc gctgccgacc tatcgggatt tgttgttttt gaagtgagtc
      781 gggagtcagg ggtccggagt ttctggttgg cagtcgggag cgctcggggt ttttcccgac
      841 tcctgactcc ggactcctga cttacaacgg ccatccagta cagcgttttc gcaggagaag
      901 aaatagttcg gaagggaggg ttgccggggt cagcgtccca gccattgctt ggaaggcttc
      961 acattcggcg gccgaggcat cgggatcgaa gcaaaccgcc atcgcctcga ccaacggcgg
     1021 ccggtccggc cggttcagcg cgtcgagcca tgggtgacat tgggtcacct gtctacaggc
     1081 cagccgcacc cgtactgcgc cgtcgagcca gcaaggccct tcggccagtg cggaaaggag
     1141 cggctggctg aggaggaggc tttctccgcc gggcgtcacc gctccgaacc gcaatttgcc
     1201 tcgctcattt cggcgatgca gcaccacccc ccacccgaat accggccgtt cgtgccgata
     1261 ccattcgagc actctgacga gctgttcgcg taaagcgtcg acgacgagtg gagatggcat
     1321 agttccgacc agcggaaatg gttgccacat gggccaggag gcgaatgggc cgcgtcattt
     1381 ctatgcagaa tgtgggccac gccggacgcc ccctggcgcc ggtctggggg actcggcaca
     1441 ttccgcggtt cacccatgag cgaccatcgc tatccccttt cccatgtcct gtaccggaag
     1501 ctgacgcgcc gctacccgcg catcgtccgg ggtgatgggt gctacctcta cgatgaccag
     1561 ggccgccggt atctcgacgg ctgcggcggt gcctatgtcg tcaacgtcgg ccacggggtg
     1621 agtgagatcg ccgaagccct ggcgtgccag gcgcggacgc tggcgtatgt gagcgggacg
     1681 acattcactc acgatgcggt cgaggaattc gccgccgaag ttgcccggct ttcgccgggt
     1741 gatctcgacc ttgtgtatcc ccttgccagc ggttccgaag ccgtcgaggc gggactcaag
     1801 ctcgcacgcc agtattgggt agaatccgcc cggccggcaa agcacaagat cctcgccttt
     1861 gctccctcct accacggcaa tacgctgctc gccctgtcgg cctcgtccag ggagcagtat
     1921 cagagctact accgcgagtg gttgacccgc attgttcgcg tcccggcgcc atatcccttc
     1981 cgctgcgcat gcagggggac gccgcccctc tgcccggcgt gcagcggcga ggcaatcgag
     2041 caagccatca ttcacgaggg cgccgacacg gtcgccgcgc tcatcggcga gccggtgggc
     2101 ggctcgtcca ccggcgcctc ggtcccacca cccgactatt ggccgcgggt ccgggcaatc
     2161 tgcgatcggc acgaggtgct gctgattgcc gacgaggtgc tcaccggcgc gggtcgaacc
     2221 ggaacctggt ccgcgctcga gccgtacggc gtggtacccg acgtcatgat cctggggaag
     2281 ggaatcagcg gcggctatgc gccgctctcc gcggtggtgg cacctcgccg gatcgtggac
     2341 gtggtggcgc acggttccgg cacgttcatg catgcgcaga ccttctccca ccacgcgacg
     2401 ctctgcgcgg ccgggattgc cacgctcaaa tacctgggcc aacaccggct gatcgagcgg
     2461 tgtgcccaaa tgggtcaggt gctgcacgaa cggcttcagg cgctgcgcac gttgcagtgg
     2521 gtgggtgatg tgcgtggtcg gggcctcctg gccggcatcg agttcgtgga ggaccgacgc
     2581 accagccggc ccttcccaac tgccgcccgc tttgccgaat cgttcgccgc cgtagccctc
     2641 gagctcggcc tggtggtatg gtccaatgcg ggtcagctgg aagacggcac cgg
//
LOCUS       DASYRV010000427         8744 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_585612, whole genome shotgun sequence.
ACCESSION   DASYRV010000427 DASYRV010000000
VERSION     DASYRV010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8744
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_585612"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..887)
                     /locus_tag="VGQ24_11500"
     CDS             complement(<1..887)
                     /locus_tag="VGQ24_11500"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEV8455513.1"
                     /translation="MASATRLCPSCNTQLPELATVCYVCGSATPPAIDKITGEFILPE
                     GLAPTPDASAEMIRKLKDSLGKHYELNELIGRGGFAEVFRVRDLWLKRDLALKAIRPD
                     LTVSGTMLARFRREAEAVAALRHPSIVPIYDIGEADGIMYILMPLIKGESLKGLLVRD
                     GRRPINEARRILLEAAGALASAHEAGVVHRDIKPENIMLEGKSRRVLVMDFGIAKVMD
                     AAGDSSLTSSGTIVGTPHYMSPEQASGDPHLDHRTDQYSLAVVGYHMLTGSVPFEGES
                     TRAILFKQMMESPRSMRELV"
     gene            1019..2950
                     /locus_tag="VGQ24_11505"
     CDS             1019..2950
                     /locus_tag="VGQ24_11505"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone-dependent
                     dehydrogenase"
                     /protein_id="HEV8455514.1"
                     /translation="MRLGRWLLAAWVVPALLSAQSAPGDWPAYGRDRGGERFSPLSGI
                     DRGNVQRLAVAWEYSTGEAAIPFNRERSFEATPLVVAGVMYLSTPLGRVIALDGESGK
                     ERWVTDLKVEPIGFGDFTSRGVSLWADPAARAGSPCALRVIVATIDARLHALDARDGR
                     PCMGFGVAGSVDLRQSLRNAPFEKEEYEVTSPPAIVRGLIVVGSAVADNGRFNAASGE
                     VRAYDARTGALRWSWDPIPQDSTDPAWRTWSGPDAHRTGAANAWSVIAADSVRGLVFV
                     PTGSASPDYFGGVRVGENRYANSVVALRAETGKIVWHFQTVHHDLWDYDNASPPALTT
                     IVKDGRKVDVVLQTGKIGMLYVLDRETGIPVFPVEERAVPASTVPGEQAWPTQPFATG
                     IAPLSPQRFLIEETWGPTPADRAACRERVGKLRNEGIFTPPSLQGTLVIPSNIGGAHW
                     GGLAVDPVRQLAIIPVNRIIAEVQLIPREEYQRRRNESGYRLEGSQYTSMRGTPYVMR
                     RGILFGPSGAPCSPPPFGTLVAVDLRTGAKKWEVPLGTFAPDAPPEAAGAGSPNLGGP
                     IVTAGGLVFIAATLDRKIRAFDVETGAELWSAPLPAGGKATPMTFAGRNGTQYVVIAA
                     GGDGGRFGKSDRVVAFSIR"
     gene            complement(3034..5781)
                     /locus_tag="VGQ24_11510"
     CDS             complement(3034..5781)
                     /locus_tag="VGQ24_11510"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEV8455515.1"
                     /translation="MPLPRQVAFLSLCLASVGVLAAQGKARATQSPSPIHAAAAHAIP
                     SPTVRAIRRSEPISIDGLLDEPIWAAAQPATDFLQAQPNIGQPATQRTEIRLAFDDEA
                     FYIGARMFDDRGALGIRTQLVRRDQETSNSDQIEFVLDTYHNHIGRTIFAVNPSGVKR
                     DAGQAASNADPSWDPVWEVKTQVDSLGWTAEFRIPFSQLRFPRDSVQAWGMQVWRTES
                     RLNEISMWSYWGPDESGGPPRFGHIEGISPGRGAQRRLEVLPYLVGRFQRLESGDTAN
                     PFYKSRDADARVGADIKYLLTSNLTLDATINPDFGQVEVDPAVVNLSAFETFFPERRP
                     FFVEGSGTFGFGGFSCFFCSNVSSLSLFYSRRIGRIPQGLLPTGTTYSDTPDATTILG
                     AGKITGRTRSGFTVGVLDAVTAREHATALVNGVRQSEEVEPFTNYFVGRLKKDFNRGN
                     LVFGAMGTSVYRSTDNPLLVSRLNTHSEALGLDWSARWKNQMYSFAGNLAFTNNVGDP
                     AAIRRLQNSSARYFQRPDRQAGGNGFLSDRYDPDATAFRGLGGYSRFAKDAGKLLFET
                     ALNWRTPGFEANDLAFNTRADYFWTNTNFALSLARPTKWYRNYFVVLGTQREYNFDGD
                     RTDTQFHTGVFGQLLNYWGVNFFGIRRTDVEDDRLLRGGPVVIRPGNWFFNTNINSDS
                     RKRVSLQVGANLSRGDLGNVSWGLNVGVDLRPASNLTMSFSPSFNRSRGAVQYVTAKP
                     DPTEVAFYGTRYILSDLSQKTAGFDTRINLTLRPTLTFELYAQPFISSVHFRRFKQFA
                     APRSRTLLVFGETVGTVTTQQNNTGQITSYTIDPDGTGPAAELVLDNPDFVTRSLRGN
                     AVLRWEYRPGSTLFLVWTRTSDDFASRTGDFDLTRDIDALFGAKADNIFLLKVNFWLN
                     R"
     gene            6044..6844
                     /locus_tag="VGQ24_11515"
     CDS             6044..6844
                     /locus_tag="VGQ24_11515"
                     /inference="COORDINATES: protein motif:HMM:NF037170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEV8455516.1"
                     /translation="MPTIEKHTPGTFCWWELATRDLGVAWRFYHALFRWEKRDVPIGE
                     GQLYRICVLEGQDVAAMYQLDRTQLEHNVASTWLPYIAVKSADEAAQQAVAAGGTLSL
                     SPFDVFDSGRMAQLTDSEGARVALWEPRQHRGAGIIREIGTVCWMELSAKDAERARRF
                     YADAFGWKPERKSLGPAGEYTYWHVVGESKAFGGMLQMTTDWGDLSPAWMTYFQVADC
                     DEIAAAARSAGGKVVMGPFDAANVGRIAVVTDPIGAVFSIIRFVSSER"
     gene            6980..7543
                     /gene="efp"
                     /locus_tag="VGQ24_11520"
     CDS             6980..7543
                     /gene="efp"
                     /locus_tag="VGQ24_11520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEV8455517.1"
                     /translation="MSIIASDIRRGMAIMFNGEPCRVLEFHHHTPGNLRAMVQAKLRR
                     LKTGTQIEHRFRSTDTVDVADLETHELDFMYKSGDTYHFMNAENYDQLEVEGETLGEA
                     AKWMAEGMRIIAEFYNGRPIGIQLPSALTLEVVDTTPVMKTATKTASTKPARLSNGVT
                     VNVPEFIQPGERIRVKPETGEYLDRAK"
     gene            complement(7629..>8744)
                     /locus_tag="VGQ24_11525"
     CDS             complement(7629..>8744)
                     /locus_tag="VGQ24_11525"
                     /inference="COORDINATES: protein motif:HMM:NF019403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heparan-alpha-glucosaminide N-acetyltransferase
                     domain-containing protein"
                     /protein_id="HEV8455518.1"
                     /translation="RERLSALDAVRGMTIAGMLLVNNPGTWSAIYPPLEHAPWHGWTP
                     TDLIFPFFVFIVGVTTHLSLSAREQAGASTAAIRAQILRRGALIILLGLLLHAFPFFP
                     LTRITEIRIPGVLQRIGVCYLAAALFAHRRSNDAVVGLVGILLLSYWGLQTLVAPPGV
                     ASATIDVPGDTLSAWIDRSIFGSHLWRESRTWDPEGLLSTLPAIGTCLLGVLAGRALV
                     RRTPLAERLNALFAWGAAGMVAGLVWNWVFPINKNLWTSSYVLFTAGMASVTIATCAW
                     IIEVRGHRRWAMPFITYGLNPLVAFVGSGMLARMLGLIHLPFKGESVSLQQASYRAAF
                     ESWLSPRNASLAYAIAFVALWYGILLVLERRGWIFKV"
BASE COUNT         1580 a         2654 c         3025 g         1485 t
ORIGIN      
        1 accagctccc gcatcgagcg gggcgactcc atcatctgct tgaagagaat cgcgcgggtg
       61 ctctcccctt cgaaggggac cgagcccgtc agcatgtggt agccgacgac ggcgagcgag
      121 tattggtcgg tgcggtggtc gaggtgcgga tccccgctgg cttgttcggg actcatgtaa
      181 tggggagtac cgacgatggt gccgctcgag gtgagcgagc tgtcacccgc ggcgtccatc
      241 accttggcga tcccgaagtc catcaccagc acgcggcgcg acttgccttc gagcatgatg
      301 ttctctggct tgatgtcgcg atgcaccacg ccggcctcgt gcgccgaggc cagggcgccg
      361 gccgcttcca ggagaatccg ccgcgcctcg ttgatgggcc ggcggccgtc ccggaccagc
      421 aggcccttca ggctttcgcc cttgatgagg ggcatcagga tgtacatgat gccgtcggct
      481 tccccgatat cgtagatcgg cacgatgctc ggatggcgca gcgcggcgac ggcctccgcc
      541 tcgcggcgga accgcgcgag catggtaccc gagaccgtca ggtcgggccg aattgctttc
      601 agggccaggt cgcgcttgag ccagaggtcc cggacccgaa atacctcggc gaagccacct
      661 cggccgatca gctcgttcaa ttcgtaatgc ttgcccagcg aatccttgag cttgcggatc
      721 atctccgcag aggcgtcggg cgtcggggcc agcccctcgg gcagaatgaa ctcgccggtg
      781 atcttgtcga ttgctggagg cgtagccgag ccgcatacgt agcaaacggt cgccagctcc
      841 ggaagctggg tgttacagga ggggcaaagg cgggttgcgg acgccacgcg aagactccgg
      901 agaccgatga ttggactgct gaacagtaac agctacgggt gctacgagcg agggggccgg
      961 gctgttgggt cgagccggcc accatgtcct atattcctgc atgacaagga gttcgaccgt
     1021 gcgattggga cgctggcttc tggccgcgtg ggtggtgccg gccctgctat cggctcaatc
     1081 cgcgcctggc gattggcccg cgtacgggcg cgatcgcggc ggagaacgct tttcacccct
     1141 cagtggcatc gatcgaggca acgtgcagcg gctcgccgtc gcctgggaat acagcacagg
     1201 cgaggccgcc atccccttca accgggaaag gtcgttcgaa gccactcccc tggtagttgc
     1261 cggggtcatg tacctgagca caccgctggg ccgggttata gccctcgacg gggagagcgg
     1321 caaggaacgc tgggtgacgg acctcaaagt cgagccgatc ggcttcggcg acttcaccag
     1381 tcgaggggtt tcgctctggg ccgatcccgc cgcccgcgca ggatcgccct gcgcgctccg
     1441 ggtcatcgtg gcgacgatcg atgcgcggct ccacgcgctc gatgcgcggg acggcaggcc
     1501 ctgcatggga ttcggagtcg ccggcagcgt ggacctgcgc cagagcctgc gcaacgcgcc
     1561 gttcgagaag gaggagtacg aggtcacttc gccgcccgcg atcgtgcgcg ggctgatcgt
     1621 cgtgggatcc gcagtggccg acaacggccg tttcaacgca gcgagcgggg aagtgcgggc
     1681 ctacgatgcc cggaccgggg cgctgcgctg gagctgggac ccgatccccc aggactccac
     1741 cgatccggcc tggcgcacct ggagtgggcc cgacgcgcat cgaaccggtg cggccaatgc
     1801 ctggtcggtc attgcggcgg actcggtgcg tggactggtg ttcgttccga ccggcagcgc
     1861 gagccccgac tatttcggcg gcgtgcgcgt gggagaaaat cgttacgcca attcggtcgt
     1921 ggcgctgcgc gcggagaccg gcaaaatcgt ctggcatttt cagacggtgc atcacgatct
     1981 gtgggactac gacaacgcct cgccgcccgc gctcaccacc atcgtgaagg atggccgcaa
     2041 ggtcgacgtg gtgctgcaga cgggaaagat cgggatgctg tacgtgctgg accgggagac
     2101 cggcattccg gtgtttccag tggaggagcg ggcggtgccc gccagcacgg tgcccggcga
     2161 gcaggcctgg ccgacccagc cgttcgccac gggtatcgct cccttaagtc cgcagcggtt
     2221 tctcattgaa gagacctggg ggccgacgcc agcggatcgg gcagcctgcc gggagcgggt
     2281 cggcaagctt cgcaacgaag ggattttcac gccgcccagc ctgcagggta cgctggtaat
     2341 tccctcgaac atcggcgggg cgcactgggg tggcctggcg gtggatccag tccggcagct
     2401 cgcgatcatt ccggtcaacc ggatcatcgc cgaggtacag ctcatcccgc gggaggaata
     2461 tcagcgccgg cggaacgaga gcggttaccg gctggagggc tcgcagtaca ccagcatgcg
     2521 ggggacgccg tacgtcatgc ggcggggaat tctgttcggg ccatcgggcg cgccctgctc
     2581 accgccgccc ttcggtacgc tcgtcgcggt ggacctccgt accggggcca agaagtggga
     2641 ggtgcccctg gggaccttcg cgccagatgc tcctccagaa gcggccggag cgggtagccc
     2701 gaacctcggc ggaccgatcg tcaccgccgg cgggctcgtc ttcattgccg ccacgctcga
     2761 ccggaaaatc cgcgccttcg atgtggagac cggtgccgag ctgtggagtg cgccgctgcc
     2821 ggccggaggg aaggcgacac ccatgacgtt cgcggggcgt aacggtaccc agtatgtcgt
     2881 gatcgcggcg ggcggggacg gggggcgttt cgggaagagc gatcgggtgg tggcgttctc
     2941 gattaggtag caggtggcag gtggcaggtg gcaggtaggt ggcaggtggc agggtcaccg
     3001 accacctatc tgccacctgc aacctgccac ctgtcatcta ttcagccaga agttcacctt
     3061 cagcaggaag atgttgtccg ccttggcgcc gaagagggcg tcaatgtcgc gggtgagatc
     3121 gaaatctccg gtgcgggagg cgaagtcatc gctggtgcgg gtccacacca ggaacaaggt
     3181 ggagccgggg cgatactccc agcgcagcac cgcattcccc cgcagcgacc gggtgacgaa
     3241 gtccggattg tccaacacga gctccgcggc gggaccggtc ccgtcggggt cgatggtgta
     3301 gctggtgatt tgccccgtgt tattctgctg ggtcgtcacg gttcccacgg tttctccgaa
     3361 aaccagcagg gtcctgctcc gcggtgccgc gaactgcttg aagcggcgga agtgcacgct
     3421 ggagatgaac ggctgggcgt agagctcgaa ggtgagcgtc ggccgcagcg tcaggttgat
     3481 ccgcgtatcg aatccggcgg tcttctggct gagatcggag aggatgtagc gggttccgta
     3541 gaaggccacc tcggtgggat cgggcttggc cgtgacgtac tggacagccc ccctactgcg
     3601 attgaaggag ggactgaagg acatcgtgag gttcgacgcg ggacgcagat caactccaac
     3661 gttcagtccc cagctcacgt tgcccaggtc gccccggctg aggttggcac cgacttggag
     3721 gctcacccgc ttccggctgt cggaattgat gttggtattg aagaaccagt tgcccggccg
     3781 gatgaccacc ggcccgccgc gcagcaggcg atcgtcctcg acatcggtgc gccggatccc
     3841 gaagaaattg acgccccagt agttgagcag ctggccgaac acgcccgtgt ggaactgggt
     3901 gtcggtgcgg tcgccgtcga agttgtattc gcgctgagtg ccgagcacca cgaagtaatt
     3961 gcgataccac ttggtgggcc gcgccagcga gagcgcgaaa ttcgtgttcg tccagaagta
     4021 gtcggccctg gtattgaagg cgaggtcgtt ggcttcgaaa cccggggtcc gccagttgag
     4081 cgcggtctcg aacagcagct tgccggcgtc tttggcaaag cggctgtagc cgccgagccc
     4141 gcggaaggcg gttgcgtcgg gatcgtagcg gtctgaaagg aagccgttcc cgccggcctg
     4201 gcggtcgggg cgctggaagt agcgcgcgct ggagttctgc agcctccgga tcgcggccgg
     4261 gtcgcccacg ttgttggtga aggccagatt gcccgcgaag gagtacatct ggttcttcca
     4321 gcgcgcgctc cagtcgagtc cgagcgcctc ggagtgcgtg ttgagccggg agaccagcag
     4381 ggggttgtcg gtcgagcgat agaccgaggt gcccatggcc ccgaaaacga ggttgccacg
     4441 attgaagtcc ttcttgagcc ggccaacgaa ataattggtg aacggctcga cttcctcgct
     4501 ctgccggacg ccattgacca gcgcggtcgc gtgctcccgc gcggtgaccg catcgagtac
     4561 ccccaccgtg aagcccgagc gggtccgccc ggtgatcttg ccggcgccga gaatcgtggt
     4621 cgcgtccgga gtgtcggagt aggtggtgcc cgtcggcagc aggccctggg ggatccgccc
     4681 gatgcgccgg ctgtagaaga gcgagaggga cgacacgttg ctgcagaaga agcagctgaa
     4741 tccgccgaag ccgaaggtgc cgctgccctc cacgaagaaa ggccgccgct ccgggaagaa
     4801 cgtctcgaac gccgacaggt tgaccaccgc cgggtcgact tcgacctgac cgaagtcggg
     4861 attgatcgtc gcgtcgaggg tcaggttcga ggtcagcaga tacttgatgt ccgcgccgac
     4921 ccgggcgtcc gcatcacgcg acttgtagaa cggattcgcg gtatcgccgc tctcgagtcg
     4981 ctggaagcgt cccacgaggt agggcagcac ctcgagacgc cgctgcgcgc cacgtcccgg
     5041 cgaaatgcct tcgatgtggc cgaagcgggg cggaccgccg ctttcgtcgg gtccccagta
     5101 tgaccacatc gagatctcgt tgagccggct ttcggtgcgc cacacctgca tgccccaggc
     5161 ctggacggag tcccgcggga agcgaagctg cgagaaggga atccggaact ccgctgtcca
     5221 gccgagggaa tccacctggg tcttcacctc ccacaccggg tcccaggatg gatcggcgtt
     5281 ggaggcggcc tggccggcgt cgcgtttgac gcccgagggg ttcacggcga aaatggtccg
     5341 gccgatgtgg ttgtgatagg tatcgagaac gaactcgatc tggtcgctgt tactggtttc
     5401 ctgatcgcgc cgcaccagct gagttcggat gcccagcgcg ccccggtcgt cgaacattcg
     5461 cgcgccgata taaaacgcct cgtcgtcgaa cgcgaggcgg atttcggtgc gctgcgtcgc
     5521 tggctggccg atgttgggct gggcctggag gaaatccgtc gcgggctgcg ccgcggccca
     5581 gatcggctcg tcgagcaggc cgtcgatgct gatcggctcg ctgcggcgga tggctcgcac
     5641 tgtcggcgag ggaatggcgt gggccgccgc tgcgtgaatc ggagagggcg actgcgtcgc
     5701 gcgggccttc ccctgggcgg cgagcacgcc gacactggca aggcaaagcg acaggaaggc
     5761 gacttgacgc ggcaacggca tcgcaaaccc taccggagtt gtggtgaggt acctggattg
     5821 gatgccgccc cgcctgaaat cgttgcctaa ctgcggtgaa cagtgaaccg taccgcagtg
     5881 aaccgtgaac agtgaactgg aaacgggcac aactctacca cctacggtcg ggttgccctg
     5941 ctggtttcca gcgtcgatac ttggcaggcc agaccatgtt gtttgcgggg ttggtacggc
     6001 tcacggttca ccattcactg ttcacgctgt tccgagacaa agcatgccga ccattgagaa
     6061 gcacacgccc ggcaccttct gctggtggga gctggccacc agggacctag gggtggcctg
     6121 gcgcttctat cacgcgctgt tccgctggga aaagcgcgac gtgcccatcg gcgaaggcca
     6181 gctgtatcgc atttgcgtcc tcgagggcca ggatgtcgcg gccatgtatc agctcgaccg
     6241 aactcagctc gagcacaacg tcgcgtcgac ctggcttccc tacatcgcgg tgaaaagcgc
     6301 cgacgaggca gcccagcagg cggtggcggc cggcggcacg ctttcgctgt cgcctttcga
     6361 cgtgttcgat tcgggccgca tggcgcagct cacggacagc gagggagcca gggtcgccct
     6421 ctgggagcca aggcagcacc ggggcgcagg cattattcgc gagatcggaa ccgtgtgctg
     6481 gatggagctc tcggcgaagg atgcggagcg agcccgccgt ttctatgcgg acgcgtttgg
     6541 ctggaagccc gagcgcaaat cgctgggccc cgcgggcgag tacacctact ggcacgtggt
     6601 tggcgagtcc aaagcattcg gcggcatgct ccagatgacg acggattggg gggacctgtc
     6661 gccggcctgg atgacgtatt tccaggtggc cgattgcgac gaaattgccg cggcggcccg
     6721 ttcggccggg ggcaaggtgg tgatgggtcc gttcgatgcc gcgaacgtgg gccgaatcgc
     6781 ggtggtgacg gatccgatag gggcagtgtt ttccattatc agattcgtca gcagcgagag
     6841 gtaagcattg agaggtgaga gggtggaatc gagggcggca gggggttatc tttaacggct
     6901 gattggagtt agggttccgc ctcccggtga gggtcggcag gtcccgttca ctgttgaccg
     6961 ttcaccattt acggccttta tgagcatcat cgcaagcgac atccgccgcg gcatggccat
     7021 catgttcaat ggggagccct gtcgggtgct ggagtttcat catcacacgc ccggcaatct
     7081 ccgggcgatg gtgcaggcca agctgcgccg cctcaagacc gggacgcaga tcgagcaccg
     7141 cttccgctcc accgatacgg tggacgtggc cgatctcgaa acccacgagc tggacttcat
     7201 gtacaagagc ggcgacacct accacttcat gaacgcggag aactacgacc agctcgaagt
     7261 cgagggagag acgctcggtg aagcggccaa gtggatggct gagggcatgc ggatcatcgc
     7321 cgagttctac aacggtcgcc cgatcggaat ccagctccct agcgcgctga cgctggaagt
     7381 ggtggacacc acgcctgtga tgaagaccgc aaccaagacg gcctcgacca agcccgcgcg
     7441 cttgagcaac ggcgtcaccg tgaacgtgcc ggagttcatt cagccgggcg agcggattcg
     7501 ggtcaagccg gagaccggcg agtatctgga tagggcgaag tagaggtgac aggtgacagg
     7561 tgacaggtga caggtgagag gtgagagggg ctgccgagag gggcccttga tgttctaggg
     7621 gttattcctc acaccttgaa gatccagccg cgacgttcga gcaccagcag aatcccgtac
     7681 cagagggcaa cgaacgcaat cgcgtaggcg agcgatgcgt tgcgaggtga gagccaagac
     7741 tcgaacgccg cgcgatagct ggcctgctgc agcgagacac tctccccctt gaacggcagg
     7801 tggatcagac ccagcatccg ggccagcatc cccgatccca caaaggcgac cagcggattg
     7861 aggccatagg tgatgaacgg catggcccag cgccggtgtc cccgaacctc gatgatccag
     7921 gcgcaggtcg ctatggtcac gctggccatc cccgcggtga acagcacata ggagctggtc
     7981 cagagattct tgttgatcgg gaagacccag ttccacacca gccccgccac catgcctgcg
     8041 gcgccccagg cgaacaacgc gttgagtcgt tcggcgagcg gggttcgcct taccagtgcg
     8101 cgccccgcga gaacgccgag cagacaggta ccgattgccg gcaaggtgga aagcagtcct
     8161 tcgggatccc aggtcctgga ctcccgccac agatggctgc cgaaaatgga gcgatcgatc
     8221 caggccgaaa gcgtgtctcc cggcacatcg atcgtcgcgg aggcaacgcc gggtggggcg
     8281 accaacgtct ggagtcccca ataactcagc agcaaaattc cgacgagccc caccaccgca
     8341 tcattggagc gccggtgtgc gaacaacgca gccgcgaggt agcacacccc gatccgctgc
     8401 agcaccccgg ggatccggat ttcggtgatg cgggtgaggg ggaaaaacgg aaacgcgtgc
     8461 agcagcaggc cgagcaggat gatcagagcg ccgcgccgga ggatctgggc gcggatcgcc
     8521 gcggtggaag cgcctgcctg ctcgcgcgcg ctcagggaaa gatgggtggt cactccgacg
     8581 atgaacacga agaacggaaa gatcagatcg gtgggcgtcc agccatgcca gggcgcatgc
     8641 tcgagcggtg gatagatcgc gctccaggtt cccggattgt tgaccagcag catccccgcg
     8701 atggtcattc cccgcacggc atccaacgca ctcagccgct cccg
//
LOCUS       DASYRV010000428         2914 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1959103, whole genome shotgun sequence.
ACCESSION   DASYRV010000428 DASYRV010000000
VERSION     DASYRV010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2914
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1959103"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..157
                     /gene="tuf"
                     /locus_tag="VGQ24_11530"
     CDS             <1..157
                     /gene="tuf"
                     /locus_tag="VGQ24_11530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001040566.1"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEV8455519.1"
                     /translation="LPAGVEMVMPGDNIQMTIELITPIAMDEGLRFAIREGGRTVGAG
                     VVTKILK"
     gene            254..406
                     /gene="rpmG"
                     /locus_tag="VGQ24_11535"
     CDS             254..406
                     /gene="rpmG"
                     /locus_tag="VGQ24_11535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEV8455520.1"
                     /translation="MPREKIILECTDCKNRNYFTDKNRRVHPERVEWKKFCPRCGKHM
                     LHKESK"
     gene            406..648
                     /gene="secE"
                     /locus_tag="VGQ24_11540"
     CDS             406..648
                     /gene="secE"
                     /locus_tag="VGQ24_11540"
                     /inference="COORDINATES: protein motif:HMM:TIGR00964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HEV8455521.1"
                     /translation="MEQVQVAERGGRVVQWIRGARDFLVAVRAEMAKVSWPTQQELIK
                     ATRMVVILAVIIGIVLGLVDLLLTKVLVEGVAALGR"
     gene            663..1205
                     /gene="nusG"
                     /locus_tag="VGQ24_11545"
     CDS             663..1205
                     /gene="nusG"
                     /locus_tag="VGQ24_11545"
                     /inference="COORDINATES: protein motif:HMM:TIGR00922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEV8455522.1"
                     /translation="MEYRWYAVQTTAGHENKVRTLLQKRIEEDPRPADQKLVRQALVP
                     VQEAIEIKNGKKAVVERKLYPGYVLIETTMSQEAQHLVNSVQGVIKFVGPGKLPQPLR
                     QDEVNRLLGIAEETSEAGPKEEIPYLVGQAVEITEGPFADFSGTVEEVLSEKGKVKVS
                     VSLFGRPTTVELDYLQLRGH"
     gene            1366..1791
                     /gene="rplK"
                     /locus_tag="VGQ24_11550"
     CDS             1366..1791
                     /gene="rplK"
                     /locus_tag="VGQ24_11550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006676477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEV8455523.1"
                     /translation="MAKKVVAVVKLQCPAGAANPAPPVGTALGPQGVNIMEFCKQFNA
                     RTQSQAGMVIPVVVTIYGDRTFTFITKTPPAANLLLKEAGIEKGSAQPNRTKVGKVTR
                     AQLKKIAEIKMADLNATDVESAMRMVAGTARSMGLEVAD"
     gene            1791..2480
                     /gene="rplA"
                     /locus_tag="VGQ24_11555"
     CDS             1791..2480
                     /gene="rplA"
                     /locus_tag="VGQ24_11555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEV8455524.1"
                     /translation="MPAAGKKFRAAVATVDRTRAYPLDEAVSLVKGAAFAKFDETVDV
                     AVRLGVDPRHADQVVRGTVVLPHGTGKTVKVLVIAQGDRVKDAEAAGADYAGIEYVQK
                     LKDGWLDADVIVATPDVMGQLGQLGKILGPRGLMPNPKAGTVTMDVARAVREIKAGKI
                     EFRVDKTGNVHAPIGKVSFSAKQLEENLAAFMETIVKARPPAAKGVYLRSATVSSTMG
                     PGVKLDTAVYR"
     gene            2477..>2914
                     /gene="rplJ"
                     /locus_tag="VGQ24_11560"
     CDS             2477..>2914
                     /gene="rplJ"
                     /locus_tag="VGQ24_11560"
                     /inference="COORDINATES: protein motif:HMM:NF000955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEV8455525.1"
                     /translation="MSKPERQAKVETLTEQLGGSPNIYVTDFTGLDVRKLTELRRRLR
                     AAGARFVVVKNTLAQRALAANQIGVLDAHLAGPTGLVLAGSDPLPAAKVLGDFAKEHQ
                     KPAVRIGLVDGKAVDPAHVKRLGSLPSREVLLAQLAGCLNGVLY"
BASE COUNT          579 a          868 c         1004 g          463 t
ORIGIN      
        1 gctgccggcg ggggtggaga tggtgatgcc gggggacaac atccagatga cgatcgagtt
       61 gatcacgccg atcgcgatgg atgaggggct gcgcttcgcg atccgggaag gtggccggac
      121 ggtgggcgcg ggcgtggtga cgaagatatt gaaataaggc gcggctactg gctagtggtt
      181 attggctatt ggacaacagc cgatagacga tcatcccata gcctatagcc catagccaat
      241 agccaggagc catatgccaa gagaaaagat catcctggaa tgcaccgatt gtaagaatcg
      301 gaactatttc acggacaaga accgtcgcgt gcaccccgag cgggtcgaat ggaagaagtt
      361 ctgcccccgc tgcggcaagc acatgctgca caaagagtcg aagtaatgga gcaggtccag
      421 gtcgccgagc ggggcggccg cgtggtccag tggatccgtg gcgcccggga cttcttggtc
      481 gcggtgcgcg ccgagatggc gaaggtatcc tggccgacgc agcaggagct gatcaaagcc
      541 acgcggatgg tggtgatcct ggcggtcatc atcggtatcg tgctgggcct ggtcgacctg
      601 ctgctcacta aggtgctggt tgagggcgtc gccgcgctgg gccgctaggc gaggagacga
      661 ccatggaata tcggtggtac gccgtgcaaa ccacggccgg gcacgagaac aaggtcagga
      721 cccttctcca gaaacgcatc gaggaggatc cgcggccggc tgatcagaag ctggtccgtc
      781 aggcgctggt gccggtccag gaggcgatcg agatcaagaa cgggaagaag gccgtggtgg
      841 agcggaaact ctatcccggc tacgtcttga tcgagaccac gatgagccag gaggcgcagc
      901 acctggtcaa cagcgtgcaa ggggtcatca agttcgtcgg tcccggcaag ctaccgcagc
      961 cgctgcgcca ggatgaggtg aaccggttgc tcggcatcgc ggaggagacc agcgaggccg
     1021 gtcccaagga agaaattccc tatctcgtgg gccaggctgt cgagatcacc gagggcccct
     1081 tcgccgactt cagcggcacg gtcgaggaag tcttgagcga gaaggggaaa gtgaaggtat
     1141 cggtgtcgct gttcggacgg ccgaccacgg tggagctgga ttacttgcag ttgagagggc
     1201 actagaagga cggacggtga ggacagagag gacggatgga ctgacctccc gtcctctccg
     1261 acctcactgt ccccgctgtc cgtcctcccc gcgaccgcac gggtttttgc ggcagaatga
     1321 cgacggcggg ccttccgtcg gtcggatttc gcaacgagga gaagcatggc gaaaaaagtc
     1381 gtcgcagtcg tcaagctcca gtgtcccgct ggtgcggcca accccgctcc ccctgtgggg
     1441 acggcgctcg gaccgcaagg cgtgaacatc atggagttct gcaagcagtt caacgcgcgg
     1501 acccagagtc aggcgggaat ggttattccc gtcgtggtca ccatttacgg tgatcgcacc
     1561 ttcaccttca tcaccaagac gccccccgcc gccaacctgc tgctcaagga ggcgggaatc
     1621 gagaagggca gcgctcagcc caaccggacc aaggtcggga aagtgactcg cgcgcagctc
     1681 aagaagatcg ccgagatcaa gatggccgat ctcaatgcca cggacgtcga gtcggcgatg
     1741 cggatggtgg cggggacggc gcgctcgatg ggattggagg tggcggactg atgccggccg
     1801 ccggaaagaa attccgcgct gcggtcgcca cggtggaccg cacccgcgcg tatccgctcg
     1861 acgaagcggt gtcgctcgtg aagggtgccg cctttgccaa gttcgacgag acggtcgacg
     1921 tggccgtgcg gctcggtgtc gatccacgcc acgccgacca agtggtgcgc gggactgtgg
     1981 tcttgcccca tggtactggc aagaccgtca aagtcctcgt gatcgcgcag ggcgaccggg
     2041 tcaaggatgc cgaagccgcg ggagccgatt acgcggggat cgagtacgtc cagaagctca
     2101 aggacggctg gctcgatgcc gatgtcatcg tggcgacgcc cgatgtcatg ggccagctcg
     2161 gccagctcgg caagatcctg ggcccccgcg gcctgatgcc gaatcccaag gccggcaccg
     2221 tcacgatgga tgtggcgcga gcggtccgcg agatcaaggc cggcaagatc gagttccggg
     2281 tggacaagac cggcaacgtc catgctccga tcggcaaggt gtccttcagc gccaaacagc
     2341 tcgaggaaaa cctcgccgcg ttcatggaga cgatcgtcaa ggcgcggccc ccggccgcca
     2401 agggcgttta cctgagatcg gcgaccgttt ccagcaccat ggggccgggc gtcaagctcg
     2461 atacggcggt gtaccgatga gcaagccaga acgccaggcg aaggtcgaga cgctcaccga
     2521 gcagctcggc gggtcgccca acatctacgt caccgacttc accgggctcg atgtccgcaa
     2581 gctcaccgag ctgcggcggc gcctgcgagc ggcgggcgcc cgcttcgtgg tggtgaagaa
     2641 caccctggcc cagcgcgcgc tcgccgccaa tcagatcggc gtgctcgatg ctcacctcgc
     2701 cggcccgacc ggcctggtgc tggccggaag cgacccgctc ccggctgcca aggtgctcgg
     2761 cgacttcgcc aaggagcatc agaagcccgc ggtgcggatc gggctagtgg acgggaaggc
     2821 cgtcgatccc gcgcatgtga agcggctcgg ctcgctgccc tcgagggagg tgctcctcgc
     2881 ccagctcgcc gggtgtctca acggagtctt atac
//
LOCUS       DASYRV010000429         3180 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3206238, whole genome shotgun sequence.
ACCESSION   DASYRV010000429 DASYRV010000000
VERSION     DASYRV010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3180)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3180)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3180
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3206238"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..946)
                     /gene="eno"
                     /locus_tag="VGQ24_11565"
                     /pseudo
     CDS             complement(1..946)
                     /gene="eno"
                     /locus_tag="VGQ24_11565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000103948.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
     regulatory      980..1039
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01734"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Fluoride riboswitches increase expression of
                     downstream genes that help mitigate the toxic effects of
                     very high levels of fluoride; They are found in a wide
                     variety of bacteria and archaea; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="fluoride"
                     /db_xref="RFAM:RF01734"
     regulatory      complement(1339..1406)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01734"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Fluoride riboswitches increase expression of
                     downstream genes that help mitigate the toxic effects of
                     very high levels of fluoride; They are found in a wide
                     variety of bacteria and archaea; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="fluoride"
                     /db_xref="RFAM:RF01734"
     gene            complement(1458..1883)
                     /locus_tag="VGQ24_11570"
     CDS             complement(1458..1883)
                     /locus_tag="VGQ24_11570"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HEV8455526.1"
                     /translation="MDDGTSLCTRPPQEPLYRAVGPDTTAWAAELKGVSEETVLVGHT
                     HVPFDLAIGQHRVVNPGSVGLPMDGDSRAAYAVLEDGAITLHHMEYSIERTVAALRCS
                     GLDPTVIDELALWLRTGRAPSRRFPLAGASKQETTSRRQ"
     gene            complement(2241..2726)
                     /locus_tag="VGQ24_11575"
     CDS             complement(2241..2726)
                     /locus_tag="VGQ24_11575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455527.1"
                     /translation="MAALPFPVAAQRNGATTRPRAAFRFSHEAGTALGALWKASLAAR
                     EERVACLASTIRNDTVFVSRIDPVEPEEADSMGISATASIERCGPPEWSGTVHTHIAL
                     YTDDSPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSARDAHCEADGVMGGMRATPRLV
                     R"
     gene            complement(2761..>3180)
                     /locus_tag="VGQ24_11580"
     CDS             complement(2761..>3180)
                     /locus_tag="VGQ24_11580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455528.1"
                     /translation="ALSFEPDARPQLHQLWNASMDAKAERVACLAATIEADTVRISAV
                     FPLIPARSDSMGISARPSLDTCGPPQWRGTVHTHVALRDGRRPYSLFSGADRGVMMLW
                     WQQWREDGVFCLLYTEQDVICEIEGPEGAVLFPRSRY"
BASE COUNT          556 a         1041 c         1029 g          554 t
ORIGIN      
        1 gaagatatcg tcgcccacga tctggatccg agaaccaagc cgctcggtca tcctcctcca
       61 gccggaccag tcgtcctcgg ccagtccatc ctcgatcgag acgatcggat agcgatccac
      121 ccactccgca tagagatcca ccatcgcctc ggccgagcgc cggctcccgt ctcccttctt
      181 gaagacgtac tcgccgtcct ggtagaactc ggatgccgct gggtcgatgg caatcgcgat
      241 gtcctttcct ggctcgtagc cggcggcttc gatcgcctgc atgaccacag cgagagccgc
      301 ctcgttggat gggagcatgg gcgcgaaccc gccctcgtcg cccacggcgg tcgagagctc
      361 catcttggtg agaacctttt tcagggcgtg gaacacttcg actcccatgc ggaggccatc
      421 cggaaacgag cccgccccga tcggcacgac catgaattcc tgggcatcga cgttgttgga
      481 ggaatgggcg ccaccgttca ggatattcat ctgcgggacc ggcatggtgc tcgctgccgg
      541 accgcctaag tatcggtaga gcggcaggcc gctctcccga gcagccgcac gggcaacggc
      601 gagggaaatg ctgaggatcg catttgctcc cagcttcccc ttgttcgggg tgccatcgag
      661 ctcgttcatc atcgcgtcga tcctgggctg gtcctcggcc ggcattccct ccagccgagg
      721 tccgaggatc tcgtgcacgt tgcaccgctt ggaggacacc cttgccgccg tagcgtctgc
      781 tgtcgccatc gcgcagctcg accgcctcgt gctctccggt cgaggcgccg ctgggtaccg
      841 cggcgcggcc ctgcgcgccg ctcgagagcg ccacctcggt ctcgacggtc ggattgccgc
      901 ggctgtcgag gatctcgcgg gcatgaaccg cagctatctc gctcatcggc gtgcatccct
      961 taaattgctc agtgtgcggt accgcgcagg cgatggagtt cgcctttgac gccgccacgc
     1021 tgatgactcc tacctcgggt gaaacgaccg cggaggagtc tggcgcgcag cgctggctac
     1081 acgactgggg caaccgcgga ccgccgaccc ggccgagtcc attgtccgag ggcagatcca
     1141 atcctcactc gagcgcttcc ccgacctgga aacctggtgg gcgtggctca tttgggccgt
     1201 gttccgggag cagtgctggt tcggatcgga tggccgggta ccgcgcacga gacgacggat
     1261 cggcgattga agggccaaag aaaaaaacgt ggaacagagc ggaggcggca gacagaagac
     1321 tcctaaccgg gccacgttgg ccgtgtagga gtcatcaacc gccggagtga cggtagttcg
     1381 cggcgaactc catcgccgtt cttcgcttcg agaggacggt agcgagtctc cccaatcggg
     1441 tcaagcgtga ttccccgcta ctgccgacgg ctagtcgtct cttgcttgct cgccccggcc
     1501 aaaggaaacc gccggcttgg cgcccgacct gttcggagcc acagggccag ttcatcgatg
     1561 actgtggggt cgagaccgga gcaccgcagt gctgcgacgg tgcgctcgat cgaatactcc
     1621 atatggtgaa gggtgattgc cccgtcctcg agtacggcgt aggcggcgcg tgaatcgcca
     1681 tccatcggga ggccgacact ccccgggttg accacgcggt gctggccgat agcaagatcg
     1741 aacggcacgt gagtatgccc gacgagcacg gtttcctcgc ttacgccttt gagctccgct
     1801 gcccacgcgg tcgtatccgg tccaactgcg cggtacaggg gctcctgggg gggtcgcgtg
     1861 cacaaggagg taccgtcgtc catccagctc gagggagacg gataacggca atcctctcag
     1921 gtatcgcatc gcgtcgccac ccagctgcgc gtacgcgatt gggagcgtag cctctgcgag
     1981 cgaacggaac ggctccgggc caccgggccc tgaatgctcc gcgatggcgt ggtcgtggtt
     2041 cccttgcacg ccggtggcgc cggcggatct gattcggtcg acacaggggc cgggcgccgg
     2101 gccactcccc accagatcac ccaaacagaa cagcgcgtcg tgcggctccg ccaggacggc
     2161 ctcgagggcc gccaagttcg catgcacatc agaaatgacg aggactctca tcggcggcac
     2221 caggcccgga tggctgagct ctaccgtaca agccggggtg ttgctcgcat ccctcccatc
     2281 acgccatccg cctcacagtg ggcatcgcgc gcgctgtaga tcagacagaa tacgccgtcg
     2341 gcgtgccacc gatcgtacca gagccgcatg gcggtgcggt cctgggccga gaatcgggtc
     2401 gaggggctgt catcggtgta gagagcgatg tgggtgtgga cggttcccga ccattccggt
     2461 gggccgcacc gctcgattga cgcggtggcc gaaatcccca tcgagtcggc ttcctcaggc
     2521 tcgactgggt cgattcgcga cacgaacacg gtgtcgttcc ggatggtgct ggccagacag
     2581 gcgacgcgct cctctcgcgc ggcaaggctt gccttccaga gggcgcccag cgccgttccc
     2641 gcctcatggc tgaagcgaaa ggcggccctg ggccgagtcg ttgcgccatt gcgttgggcg
     2701 gccacgggaa aagggagtgc tgccaacagt agaagcgccg gcccgaggag ctgagtcaac
     2761 ttagtagcgt gatcgaggga agagcactgc tccctccggg ccttcgatct cgcagatgac
     2821 gtcttgctcg gtgtagagca ggcagaatac cccgtcctct cgccactgct gccaccacag
     2881 catcatcacg ccgcgatccg ctcccgagaa cagcgagtac ggccggcgac catcccggag
     2941 cgcaacgtgg gtatggacgg tgccgcgcca ctgcgggggg ccgcacgtat caagcgaggg
     3001 ccgggccgat attcccatcg agtccgaacg tgcggggatc aaggggaaca cagccgagat
     3061 ccgaaccgtg tcggcctcga ttgttgccgc cagacaggcg acccgctcag cctttgcatc
     3121 catgctggca ttccagagct gatgaagctg cggccgtgca tcgggctcga agctaagggc
//
LOCUS       DASYRV010000430         3839 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_587412, whole genome shotgun sequence.
ACCESSION   DASYRV010000430 DASYRV010000000
VERSION     DASYRV010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3839
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_587412"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..522)
                     /locus_tag="VGQ24_11585"
     CDS             complement(<1..522)
                     /locus_tag="VGQ24_11585"
                     /inference="COORDINATES: protein motif:HMM:NF020892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEV8455529.1"
                     /translation="MTYHTLARSREAGWFKFEVYETEPYRVPKFFLTTAIDYSNGDPH
                     LGHALEKVGADAIARYRRLRGDRVHFLMGMDEHSQSVLQAAARAGVPPQVWVDRMAAR
                     FREFWQRLECSNDAWIRTTEPRHARSVTELIQRIQRLNPDDLYVAEYEGLYCTGCEEF
                     KQESQIVDGHCIEH"
     gene            588..878
                     /locus_tag="VGQ24_11590"
     CDS             588..878
                     /locus_tag="VGQ24_11590"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEV8455530.1"
                     /translation="MGVLDKLFGNESGKEKSKADFSDVRSGSSSTAPTSPSQAGAFNR
                     TYTVVAGDSLSKIAKREYGDASKWHRIYEANRDKIQNPDLIYPGQVLNLPQG"
     gene            889..1344
                     /locus_tag="VGQ24_11595"
     CDS             889..1344
                     /locus_tag="VGQ24_11595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455531.1"
                     /translation="MLRYHPDAMVRAGCLALMLAASACGKKDNAATVETTSGAATATP
                     IHVTDVKVGRTLGADKRLTDETDEFRPADVIYTVVETRGTAPNAVLQARWTYQDGQVV
                     DESSRNISASGDDVTEFHISKPSGWPTGKYKVQILLNGTPVESEDFEVK"
     gene            complement(1393..2394)
                     /gene="ricT"
                     /locus_tag="VGQ24_11600"
     CDS             complement(1393..2394)
                     /gene="ricT"
                     /locus_tag="VGQ24_11600"
                     /inference="COORDINATES: protein motif:HMM:NF041131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory iron-sulfur-containing complex
                     subunit RicT"
                     /protein_id="HEV8455532.1"
                     /translation="MSQTVEVRFKGTRKAYFVWEDEADPIRIKEPVIVEVERGRDLGR
                     VTAVGDMAAKKCGSCTSCAVGEIAEEPAPLKPVLRRATPEDLKVHHDIRLSEEEVRQK
                     VIQRVRAHDLLMKVSDTEWQWDRSKLTIYFTADKRVDFRALVRDLASLFRTRIELRQI
                     GVRDEAARISGIGRCGREYCCSTWLKELSPVNLGLAKDQHLSLNPSQISGGCGRLLCC
                     LKYEHDFYVTARKRFPKEGKTVKTSVGAEKVIAVDIFRERVFLRNEEHGSRIIPLTQL
                     RLEVEQLGDVLPIADERSRHAVRTAEHDPADSTSPPESRRQGRRSRERGGEGPESPA"
     gene            complement(2394..3356)
                     /locus_tag="VGQ24_11605"
     CDS             complement(2394..3356)
                     /locus_tag="VGQ24_11605"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEV8455533.1"
                     /translation="MASAYTLDFEKPLLELERQIDDLKRIGTERQIDIDGELEGLQTK
                     LESLRADIYRNLTPLQRVMVARHPRRPYTLDYLSTIFTDFIELHGDRLYMDDPAIVGG
                     WARLAGVSVMVIGHQKGRDTKENLIRNFGMPHPEGYRKALRLMKLAAKFGAAVITLID
                     TPGAYPGLGAEERGQSEALARNILEMSALPTACIAVVIGEGGSGGALALGVADRVLML
                     ENSVYSVISPEGCAAILWKDSSQRERAAEALKLTADDLLRLKVIDEIVAEPVGGAHVD
                     PDATGEALREALIRHVTELRKIRPEKLVRRRAEKYAAMGAFSEA"
     gene            complement(3362..>3839)
                     /locus_tag="VGQ24_11610"
     CDS             complement(3362..>3839)
                     /locus_tag="VGQ24_11610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455534.1"
                     /translation="QISKKTGKEYARLVLEDFHGTAEAIVFPDAWAKLNQTIVQDGAL
                     LLTGGYSDRDRGEDQAPFIVETARPLEELKASGALALSLRWRAPSAPEPAALKEVAAL
                     CSAHPGPTPLYIEWTDGNGDAVRLRSRRVRVAAEDDLVRALRDLLGAESVHYVKAG"
BASE COUNT          681 a         1251 c         1204 g          703 t
ORIGIN      
        1 atgctcgatg cagtggccat ccacgatctg gctctcctgt ttgaactctt cgcagccggt
       61 gcagtacagc ccttcatact cggccacgta gagatcatcg gggttcagcc gctgaatccg
      121 ttggatcagc tcggtcaccg aacgggcgtg gcgcggctca gtggtgcgga tccaggcgtc
      181 gttgctgcac tccagacgct gccagaattc ccggaaccga gcggccatcc ggtccaccca
      241 gacctggggc gggacgcccg cccgcgccgc agcctggagc accgattggc tgtgctcgtc
      301 catgcccata aggaaatgga cccgatcacc gcgcagccgg cgatatcttg cgatggcgtc
      361 cgcgccgacc ttctccaatg cgtggcccag atgggggtcg ccgttggagt agtcgatagc
      421 tgtggtcaga aagaacttgg gcacgcggta cggctccgtt tcgtatacct cgaacttaaa
      481 ccagccggct tcccgggacc tagctagtgt gtggtaggtc accgcacggg tctccctgct
      541 agggctaatt acgccttcct gcgcagcctt tgatagcgag gtgctttatg ggagttctcg
      601 acaagctttt cggcaacgaa agcgggaagg aaaagagcaa ggcggatttc tctgacgtcc
      661 gaagcggtag ctcctctacc gctcccactt caccgagtca ggctggggcc ttcaaccgta
      721 cgtacacggt ggttgccgga gacagtctct ccaagattgc caagcgagag tacggcgatg
      781 cctccaaatg gcatcgaatc tatgaggcca atcgcgacaa gatacagaat ccggacctga
      841 tctatcccgg acaggtcctg aacctgcccc agggctgagg gggtcgcgat gctacggtat
      901 catccagatg ccatggtccg ggctggctgc ctcgccctga tgctcgcggc gtcggcatgc
      961 ggcaagaagg acaacgcggc gaccgtcgaa actacgagcg gagccgctac cgctaccccg
     1021 atccacgtaa ccgacgtaaa ggtgggccgc acactcgggg ccgacaaacg cctgaccgac
     1081 gagaccgacg agttccgccc ggccgacgtg atctacactg tcgtggagac ccgggggact
     1141 gctccgaacg cggtactcca ggcgcgctgg acgtatcaag atggccaggt ggtagacgag
     1201 tccagccgga atatctcggc gtccggtgat gacgtcacgg agttccacat ctcgaaaccg
     1261 agcggctggc ccacggggaa gtacaaggtt cagatcctgc tgaatggcac gcccgtcgag
     1321 tcggaagact tcgaagtcaa gtagacggtg cgttgctgcg atcgctggat gcagttcggc
     1381 gcgtgtcccg aatcaagctg gagattcggg accctcgccg ccgcgttcgc gggagcggcg
     1441 gccctggcgg cgggactcag gcggggacgt cgaatcggca gggtcatgct cggcagtccg
     1501 gaccgcatga cgcgagcgct catctgcgat cggtagcaca tcgccgagtt gctcgacttc
     1561 gagccgtagc tgcgtcaatg gaatgatgcg cgagccgtgc tcctcgttcc gcaggaagac
     1621 gcgctcgcgg aagatgtcta ctgcgatcac cttctcggca cccaccgacg ttttgacggt
     1681 cttcccctcc ttggggaagc gctttctggc cgtgacgtag aaatcgtgct catacttgag
     1741 gcagcagagc agccggccgc atccgccgga gatctgcgac gggttgagtg acaagtgctg
     1801 atccttggcc aggccgagat tgaccgggga gagctccttg agccaggtcg agcagcagta
     1861 ctcccgcccg cagcgaccga tgccggagat ccgagccgct tcatcgcgca ccccgatctg
     1921 gcgcaactcg atccgggtgc ggaacagtga cgccagatcc cgcaccagcg cgcggaaatc
     1981 gacccgtttg tcggccgtga agtagatggt gagcttgctg cggtcccact gccattcggt
     2041 atcgctcacc ttcatcaaca ggtcatgcgc gcgcacccgc tggatcacct tctgccgaac
     2101 ctcctcctcg gagagccgga tgtcgtggtg gactttgagg tcctctgggg tagcacgccg
     2161 gagcaccggc ttgagcggcg ccggctcctc cgcgatctcc cctacggcgc agctggtgca
     2221 gctgccgcac ttcttcgcgg ccatgtcgcc aacggcggtt acccgtccca ggtcccgccc
     2281 ccgctcgacc tcgacgatga cgggctcctt gatgcgaatc ggatccgcct cgtcttccca
     2341 aacgaagtag gctttccggg tgcccttgaa tcgaacttcg acggtttgtg acatcaggcc
     2401 tccgaaaagg cgcccatggc ggcgtacttc tccgcgcggc gccgcacgag cttctccgga
     2461 cggatcttcc ggagctcggt gacatgacga atgagcgctt ctcgcagcgc ttcgccagtg
     2521 gcatctgggt ccacgtgggc gcccccgacc ggctccgcca cgatttcgtc gatgaccttg
     2581 agccggagca gatcgtcggc ggtgagcttg agcgcttcgg ccgcgcgctc gcgctggctc
     2641 gagtccttcc agagaatggc ggcgcagccc tcgggtgaga tcaccgagta gaccgagttc
     2701 tccagcatga gcacccgatc ggctaccccc agcgcgagcg ccccgccgga gccgccctcc
     2761 ccgatgacga cggcgataca cgccgttggc agcgcagaca tctcgaggat attccgggcg
     2821 agagcctccg actggccccg ctcttcagcc cccagtcccg ggtaggcgcc cggcgtatcg
     2881 atcagggtga tgaccgcggc tccgaacttg gcggcgagct tcatgagccg gagcgccttc
     2941 cgataacctt cgggatgcgg catcccaaaa ttgcggatga gattctcctt ggtgtcccgt
     3001 cccttctggt gaccgatcac catcaccgac acgccggcga gccgggccca gccacccacg
     3061 atcgccggat cgtccatata cagccggtct ccgtgcagct cgatgaagtc ggtgaagatg
     3121 gtgctcaggt agtcgagggt atacggccgg cgagggtggc gggcgaccat gacccgctgg
     3181 agtggcgtca gattccggta aatgtccgcc cggagcgatt ccagcttggt ttgcagtcct
     3241 tcgagctcac cgtcgatatc gatctgccgc tcggtcccga tgcgcttgag gtcgtcgatc
     3301 tgacgctcca attcgaggag tggcttctcg aagtccaggg tgtaggccga agccattggg
     3361 atcagcccgc cttgacgtag tggacggatt cagcgccaag cagatcacgc agtgcccgga
     3421 cgaggtcgtc ctcggccgcg acgcggacgc gccgggaccg gagtcgaacc gcatcgccgt
     3481 tgccgtcggt ccactcaata tagagcggcg tcggacccgg gtgcgccgag catagtgccg
     3541 caacttcctt cagggccgcc ggttcgggcg cggagggagc gcgccagcgc aggctgagcg
     3601 ccagcgcacc cgacgccttg agctcctcca acggccgtgc cgtctcgacg atgaacggcg
     3661 cctggtcttc gccccggtcc cggtcgctgt atcctccggt cagcagcagc gccccgtcct
     3721 ggacaatggt ctgattgagc ttggcccagg cgtccggaaa cacgatcgcc tcagccgtcc
     3781 cgtgaaaatc ttccagcacc agccgggcgt actccttgcc cgtcttcttc gagatctgc
//
LOCUS       DASYRV010000431         2551 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3699832, whole genome shotgun sequence.
ACCESSION   DASYRV010000431 DASYRV010000000
VERSION     DASYRV010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2551
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3699832"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..370)
                     /locus_tag="VGQ24_11615"
     CDS             complement(<1..370)
                     /locus_tag="VGQ24_11615"
                     /inference="COORDINATES: protein motif:HMM:NF023113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2380 domain-containing protein"
                     /protein_id="HEV8455535.1"
                     /translation="MRPYLIGLLGLATFASTAPGQAVGPKARLALFDVVFYGKGANSL
                     ELGDPLVAAMTDTILRADLERSGRFQILDSAGLAQASAQALAGGVECATLECRRQVSK
                     KAGAAWMVTSKLSKTSNLIWY"
     gene            complement(376..813)
                     /locus_tag="VGQ24_11620"
     CDS             complement(376..813)
                     /locus_tag="VGQ24_11620"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEV8455536.1"
                     /translation="MRTPISIVLRCRSLVGLFLALGAVTTVARAQELRDAYHQAPRDT
                     VSQEVYDGWKQFNLNCARCHGEDVQGTTIAPHLIVSLKPTGPINTKELVIQTVCAGRP
                     AKGMPSWCALGMEPATIEKIYAYVKGRSDAKISPGRPAVKPGA"
     gene            complement(877..1749)
                     /locus_tag="VGQ24_11625"
     CDS             complement(877..1749)
                     /locus_tag="VGQ24_11625"
                     /inference="COORDINATES: protein motif:HMM:TIGR03871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinoprotein dehydrogenase-associated putative
                     ABC transporter substrate-binding protein"
                     /protein_id="HEV8455537.1"
                     /translation="MAMLCSPSVRIAAALALTGTTALPPSLTAQALRPNVEKPGIIRV
                     CADPDNMPLSNQKGEGFEQKIAELIAKEWNSKVEYAWWPVRRGFFARALNGRYCDVAI
                     EAPSGLDIAAVTKPYFRSGYVFVTRKDSGLDIKSLADPRLKKLKIGVNLLNSDAENTP
                     PAMALSRYGVVGNLVGFSTFYTDTERPEDIINAVAKKDIDVAIVWGPIAGYFVKRAPA
                     LLAVEPLPARDSLSDFPFQYNIGMGVRRRDKALRDSLQSVLDRKAPEIQAILKQYGVP
                     VFPIQVDSARATSR"
     gene            complement(1911..>2551)
                     /locus_tag="VGQ24_11630"
     CDS             complement(1911..>2551)
                     /locus_tag="VGQ24_11630"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEV8455538.1"
                     /translation="PKYGTTSKKNTEGICPAAIGFKDQQPAAYSPVTGLFYVPANHIC
                     MDYEGVEVKYTAGQPYVGAIVRMFPGPGGHRGNFIAWDPMKGKAVWSNKENLAAYGGA
                     LTTAGGLVFYGTMEGWLKALDQKTGKTLWQFKTPSGIIGNPMTYNGPDGQQYVAVLSG
                     IGGWAGIGVAAGIGAEDPTAGLGALGAFGDAGNFSNQGGVLTVFGLKNMTMK"
BASE COUNT          446 a          811 c          821 g          473 t
ORIGIN      
        1 ggtaccagat gaggttgctg gtcttgctca gcttggaagt caccatccag gccgcaccgg
       61 ctttcttact cacctggcgc cggcactcca gcgtggcaca ttcgacaccg cccgccaggg
      121 cctgggcgga agcctgagcc agccctgcag aatcgaggat ctgaaagcgt ccggagcgct
      181 cgaggtctgc ccgtagaatg gtgtcggtca tcgcggccac cagcgggtcg cccagctcca
      241 gcgaattggc ccccttgccg tagaacacga cgtcaaagag ggccagccgc gctttggggc
      301 cgactgcctg gccgggcgcc gtggaggcaa aggtagccag tccgagcagt ccgatcaggt
      361 atggccgcac tgcttctagg ctcccggctt cactgcgggc cggccaggcg agatcttggc
      421 atcgctccgg cccttcacgt aggcgtagat cttctcgatc gtcgccggct ccataccgag
      481 cgcgcaccag gacggcatcc ctttcgccgg ccggccggca caaaccgtct ggatgacgag
      541 ctccttggta ttgatgggtc cggtcggttt gagtgatacg atgaggtgcg gcgcgatcgt
      601 ggtgccctga acgtcctctc cgtggcaacg cgcgcagttc aggttgaact gcttccagcc
      661 gtcatagacc tcctgagaga ccgtatcccg cggggcttgg tgatatgcgt cccggagctc
      721 ctgggcgcgg gcgaccgtgg tcactgcgcc gagggccagg aagagaccga ccagactcct
      781 gcaccgcaaa acgatcgaga tgggcgtgcg catgctggcg gggcgatcct ttcgtacggc
      841 gcggggttgg aacgtgctgc tcggatgaag ggaatgctat cggctcgtgg ctcgagctga
      901 atcgacctga atgggaaaca cgggaacgcc atattgcttc aggatggcct gaatctctgg
      961 tgccttgcgg tcgaggacgg attgcaggct atcacgcagc gccttgtccc gccgccgtac
     1021 acccatgccg atgttgtact ggaaagggaa gtcgctcagt gaatcgcgcg cgggcagcgg
     1081 ctcgactgcg aggagggccg gggctcgctt gacgaagtac ccggcgatcg ggccccagac
     1141 gatggccaca tcgatgtcct tcttggccac cgcattgatg atgtcttccg gtctttcggt
     1201 gtcggtgtag aaggtgctga atccgaccag atttcccacc actccgtagc ggctcaacgc
     1261 catggccggc ggagtgttct cggcgtcgga gttgagcagg ttcacgccga tcttgagctt
     1321 cttcaggcga ggatctgcca gggacttgat gtccagtcca ctgtccttcc gggtcacgaa
     1381 gacgtagccc gaacggaagt agggtttggt gaccgctgcg atatccaaac ccgacggcgc
     1441 ctcaatggcg acgtcgcagt agcggccgtt cagcgcccgc gcgaagaagc cccgccgcac
     1501 cggccaccag gcgtactcga ccttggagtt ccactcctta gcgatcagct cggcgatctt
     1561 ctgctcgaac ccctcaccct tctgattcga gaggggcatg ttgtccgggt cggcgcagac
     1621 ccggatgata cccggcttct cgacgttggg tcgcaacgcc tgggcagtga gactaggggg
     1681 gagagcggta gtgccggtca gcgccagcgc cgcggcgatt cggactgagg gggaacagag
     1741 catagccatc gttccgcgta ggaggggaac cggccggcca gaacagccgg acagcgtccc
     1801 tatggacgaa acggcaccgg agcgaacagc actccggcgc cgtctctcac ctctgtaatc
     1861 tacccccggg aaaggctgga ggcgaaaccc ccagcccttc cggacccggc ttacttcatc
     1921 gtcatgttct tgagcccgaa gaccgtcagc acgccacctt ggttgctgaa gttgcccgcg
     1981 tcgccgaacg cgccgagcgc gcccagacca gcggtcggat cttccgcgcc gatgccggca
     2041 gctacgccga taccagccca gccgccgatt ccggaaagca cggccacata ctgctggcca
     2101 tccggaccgt tgtaggtcat cgggttgccg atgatccccg acggggtctt gaactgccac
     2161 agggtcttcc cggtcttctg gtcgagcgcc ttcagccagc cttccatggt gccgtagaag
     2221 accaggccgc cggccgtggt gagcgccccg ccgtatgccg cgaggttctc cttgttcgac
     2281 cacaccgcct tgcccttcat gggatcccag gcgatgaagt tgccacggtg accacccggg
     2341 ccggggaaca tccgcacgat cgcaccgacg tacggctgac cggcggtgta cttcacctcg
     2401 acgccttcat agtccatgca gatgtggttc gccgggacgt agaagaggcc agtgactggt
     2461 gagtaggccg caggctgctg atccttgaag ccgatcgccg cggggcagat gccctcggtg
     2521 ttcttcttcg aggtggtgcc gtacttggga t
//
LOCUS       DASYRV010000432         8245 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2253196, whole genome shotgun sequence.
ACCESSION   DASYRV010000432 DASYRV010000000
VERSION     DASYRV010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8245
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2253196"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..692)
                     /locus_tag="VGQ24_11635"
     CDS             complement(<1..692)
                     /locus_tag="VGQ24_11635"
                     /inference="COORDINATES: protein motif:HMM:NF017024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate reductase C-terminal
                     domain-containing protein"
                     /protein_id="HEV8455539.1"
                     /translation="MRIAIIGNGKMGKAVAALATERGHSIHLLVSRLENDRGRALTAE
                     RLAGADVAIEFTRPDAVVANLERLISLGVPTVTGTTGWTESLPRVSELVRQRAGALLH
                     AANFSVGVHLFFRAARDLARSFRGRPEFAVSIHEEHHKTKLDVPSGTALLLQRQLWEE
                     EPGRRFPITSVRAGDAPGTHAISYTAPHETITLTHVTRSGDVFAAGALAAAEWLPGRT
                     GVFTFDQMLFGEP"
     gene            complement(772..2124)
                     /locus_tag="VGQ24_11640"
     CDS             complement(772..2124)
                     /locus_tag="VGQ24_11640"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: protein motif:HMM:NF006570.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEV8455540.1"
                     /translation="MIVSKFGGTSVADGHAITRLIDIVRARIAERPVIVVSALARVTD
                     TLLNLARRAGVADEEELEAGVSALLARHEQVARELPGGAVAVDAISADAAALRRELGC
                     VRRRMATAAELDAIAGRGELWSSRLVAAALAGAGLEAAWVDIRPVMVTDDRFTRATPY
                     IQVLNTRARECLQPMIDAGRIPVTQGFIGATATGLATTLGRGGSDFTAALLGAALGAD
                     RVEIWTDVNGLMTADPRIVPTARTLPAASYEEAAELATFGARILHPATALPLVRAGIP
                     IVILNANDPERPGTTIEPEAQLDRVGDSPIRSISWKQGITVINIRAPRMLGAYGFLRA
                     LFEVFERHETVVDVLASGEVSISLTIEDRSRLDPLVRDLADLGEVWIEEHRAIVAVVG
                     IGLRNTPGLAARVFNAVWPANVEIISQGASAINMTFVVREDDGPDVVRRLHREFFGSD
                     "
     gene            complement(2121..3173)
                     /gene="asd"
                     /locus_tag="VGQ24_11645"
     CDS             complement(2121..3173)
                     /gene="asd"
                     /locus_tag="VGQ24_11645"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEV8455541.1"
                     /translation="MGERIPVSILGATGTVGQKFVRLLADHPWFELAAVAASSASAGK
                     PYEEVVRWREPVPLPRSIAGMIVRDCAPPLPGRIVFSALDAEVAGTIEQAFARAGAIV
                     VTNTRTHRMDPDVPLLIPEVNADHLALVDCQRESRGWKGAILANPNCSTAALALALAP
                     LHRAFGIKRLFVSTMQAVSGAGYPGVASLDIVGNVIPHIGGEEEKIERESRKILGTLA
                     NGAVEPAEFAVSVHANRVAVVDGHMATVSVGFERRVRPEEAAEAIRDFRGPAQVERLP
                     SSPTPPVELDARVDRPQPRLDIDRGNGMAVTVGRLRSCPILDLRLVVLGHNTVRGAAG
                     QGVQIAELLVADERRG"
     gene            complement(3166..4173)
                     /locus_tag="VGQ24_11650"
     CDS             complement(3166..4173)
                     /locus_tag="VGQ24_11650"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEV8455542.1"
                     /translation="MDALELTRALVALETPTGSEGAATDLLDSTLRSGGYKVVRQPVS
                     AGRHNLYAFREPPELVFSTHLDTVPPYVPLREDADSIHGRGSCDAKGLAAAMVAAAER
                     LAERGERRIGLLFLVGEENGSDGARAANELGPKGRFLINGEPTENRLSIGQKGSLRVD
                     LEATGRAAHSAYPDEGVSAIAALLDTIERIRRMPLPADPLLGQSTLNLGLIGGGVAPN
                     VIPPAATAQLLIRTVAPTEPLKAAIRSLLIPGVTVEFGVELPFHKGGSAPAGWDTTVV
                     SYASDLPFLHAWGERYQLGPGTIRVAHTSQEHIRKADLLHGVELYVRLASDLLARDRH
                     G"
     gene            4551..4937
                     /locus_tag="VGQ24_11655"
     CDS             4551..4937
                     /locus_tag="VGQ24_11655"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEV8455543.1"
                     /translation="MSVTTLSRIIAALSAITLLGACNDSFSPSASVPSFEGLTVVPQS
                     ATIQAGQVVALKARLIDENGDQLREVATSWMSSNETVATVAASGEVLGRGAGRAIITA
                     TAQGKSQTAAIHVLDRPSKPEPKGEN"
     gene            complement(4984..6336)
                     /locus_tag="VGQ24_11660"
     CDS             complement(4984..6336)
                     /locus_tag="VGQ24_11660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEV8455544.1"
                     /translation="MPKSSLLSRLGLDRPELRAWAMYDWAASAMQTTIMVAVFPIYFV
                     KVAGSGLAESGATQRLALVNSLALVFIALLSPILGAISDYRAAKKRFLALFMGIGVGA
                     VLAMFFIHHGDLDLASVLLTVSLIGVAGSFVFYEALLPHVARPGEIDRLSTAGYALGY
                     FGGGVLLAFNLAWIQRPDWFGLPHGPGLSEEQATLPVRLAFVSVAVWWVVFSLPLFRK
                     VPEPPALLEPDERRDENPVKMAFVRLAESFRELRSYRNAFLLLLAFLIYNDGIQTIIK
                     MATAYGTEIGIGQSALIGAILLVQFVGIPCSFLFGMLAHRIGAKRALFLGLMAYTAIS
                     LLGYFMKTAFHFYVLAGLVGTVQGGTQALSRSLFASMIPRHKSGEFFGFFSVFEKFAG
                     IFGPLIFAGTIAATGSSRNAILSVIIFFAVGALLLWPVNVEEGQRIARAADRGTVRAT
                     "
     gene            6571..>8245
                     /locus_tag="VGQ24_11665"
     CDS             6571..>8245
                     /locus_tag="VGQ24_11665"
                     /inference="COORDINATES: protein motif:HMM:NF019135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HEV8455545.1"
                     /translation="MDKGSFLSSPVMKGAVSFGCALLLGLPVPARSQTPAPGLDSQKP
                     ITQYVHDVWQIDQGLPQNSVLAMAQTRDGYLWIGTEAGLARFDGVAFTTYNSTNSGGL
                     SDTYVSSLLAEGADDLWAGTWVGGIARFKGSKSSGVAGTSGSIVNCLYRDRAGTLWAG
                     RGAGLERWSEGRFHSVPGTERDVYTLAEDANGALLIGTERGIQTLQHGRIVPRQPAGG
                     RIAGPVWTIYRDREGSLWFGTSDALYRAANGKLDRFTTADGLPPGGVSAIVGTQNGQL
                     WIGTNGGGLARFAAGRFERFTTRDGLSDDAVSALLEDREGSLWVGTQHGGLNRFREPI
                     LTIYSRRQGLSANVIWSVYGDRQQALWIGTQEGGLNRFQGGRFTAYTVKDGLPSNSVF
                     ATLQTSDGVLWVGTNEGIARLRHGRWENLGAAGAFPKRRVAAFLEDRTGALWIGGKDG
                     LYRWKNGRLHDYSQEAGVEAAVATASVRTIVEDQEGSLWIGTHGRGLIRRRNGRFTTF
                     TTKQGLSDDVVESLYADEHGLWVGTVSGLNLVQDGRITILPLSATVFMTD"
BASE COUNT         1503 a         2704 c         2711 g         1327 t
ORIGIN      
        1 ggctctccaa acagcatctg atcgaaggta aagacgccgg tacgcccggg cagccactcg
       61 gcggccgcca gcgcgccggc ggcgaacaca tccccgctcc gggtcacatg ggtcagggtg
      121 atggtctcgt gcggcgcggt gtagctgatc gcgtgggtcc ccggcgcatc gccggcacgc
      181 acggaggtaa tgggaaaccg gcggcccggc tcctcctccc acaactgacg ctgcagcagg
      241 agtgccgttc ccgaggggac atcgagcttg gtcttatggt gttcctcgtg gatcgacacg
      301 gcgaactccg ggcgcccgcg gaaggaacgc gcaaggtcgc gcgcggcgcg aaagaagagg
      361 tgaacaccga ccgaaaagtt ggctgcatgg agcagcgctc cagcgcgctg gcggaccagc
      421 tcactcaccc tggggaggga ctcggtccag ccggtcgtgc cggtaaccgt gggaacgccc
      481 aagctaatca gccgctccag attggccacg actgcatcgg ggcgggtaaa ctcgatggcc
      541 acgtccgcac cggcgagccg ctcagccgtg agggctcttc ctctgtcatt ctccagccgg
      601 ctcacgagga gatgaatgct gtggccgcgc tcggtcgcca gcgctgctac cgccttaccc
      661 attttgccgt taccgatgat ggcgattcgc atggcggtca cgagtcacga gtcacgagcc
      721 acaagcatgg ggcatgcgcc gcgactcgcg acccatgact cgcgactctc ctcaatccga
      781 gccgaagaat tcacgatgca gtctgcggac cacgtcggga ccgtcgtctt cccgtaccac
      841 gaaggtcatg ttgatggcgg aggcgccctg ggagatgatc tcgacgttgg cgggccagac
      901 cgcgttgaaa acccgggcag caagccccgg tgtgttccgc aatccgatgc ccacgactgc
      961 cacgatggcc cgatgctcct cgatccacac ctcgccgagg tccgcgagat cgcgcaccag
     1021 aggatccagg cgggaacggt cctcgatggt cagcgagatg ctcacctcac cgctcgccag
     1081 cacgtccacc acggtttcgt ggcgctcgaa cacctcgaag agcgcgcgga gaaagccata
     1141 ggcgccaagc atccgcggcg cccggatgtt gataaccgtg attccctgct tccacgagat
     1201 cgagcgaatc ggcgaatcac cgacccgatc cagctgggcc tcgggctcga tcgtggtccc
     1261 ggggcgttcg gggtcgttcg cgttgagtat gacaatgggg atgcccgcgc ggaccagtgg
     1321 cagcgcggtg gccgggtgga ggatgcgggc accgaacgtg gccagctcgg cggcctcttc
     1381 gtaactcgca gccgggaggg tgcgtgcagt tggcacgata cggggatcgg ccgtcatcaa
     1441 cccgttcaca tcggtccaga tctccacccg gtccgccccc agcgctgcac ccagaagggc
     1501 ggcagtgaaa tcggatcctc cccggccaag cgtggtagcc agaccggttg ccgtggcgcc
     1561 gatgaacccc tgcgtcaccg ggatgcggcc ggcatcgatc atcggttgca ggcactctcg
     1621 ggcccgggtg ttcagcacct ggatatacgg cgttgccctg gtgaagcgat cgtcagtgac
     1681 catcaccggc cggatatcta cccaggcagc ctccagcccg gctcccgcga gcgctgccgc
     1741 caccaggcgc gagctccaga gctcgcctct gccggcgatc gcatcgagct cggcggccgt
     1801 ggccatccgg cgccgcacgc agcccagctc ccgccggagc gccgcagcgt cggccgagat
     1861 tgcatccact gccaccgctc cacccgggag ctcgcgggca acctgctcat ggcgtgccag
     1921 tagggcggag acccccgcct cgagctcttc ctcgtcggcc accccggccc gccgagccag
     1981 gttcaggagc gtgtcggtaa ctcgcgccag ggcggagacc acgatcacag gccgctcggc
     2041 aatcctcgca cggacgatat cgatcagccg ggtgatggcg tgtccatcgg ctaccgatgt
     2101 gccaccgaac ttggagacga tcatccgcgc cgctcgtcgg ccaccagcag ctcagcgatc
     2161 tggactccct ggccggctgc accccgcacc gtattatgcc cgagcacgac cagacgcaga
     2221 tcgaggatcg ggcaggagcg caaccggccg actgtcaccg ccatgccgtt tccacgatct
     2281 atatcgagcc ggggttgggg ccgatccacc cgggcatcca gctcgaccgg cggggtcggt
     2341 gaagacggga gtctttccac ctgggcgggt cccctgaaat cacggatcgc ctcagcggcc
     2401 tcttccggcc ggacccgccg ctcgaagccg accgatacag tggccatatg cccgtccacg
     2461 accgccaccc ggttggcgtg gacactcacc gcgaactccg ccggctcgac ggcgccgttg
     2521 gcgagcgtgc cgagaatctt gcggctttcc cgctcgatct tctcctcctc cccgccgatg
     2581 tggggaatga cgttgccaac gatatcgagg gaagcgactc ccggatatcc cgcgcccgag
     2641 accgcctgca tcgtggagac gaacagccgc ttgattccga atgcccgatg cagtggcgcg
     2701 agcgccaggg ccaacgcggc ggtcgagcag ttcggatttg ccaggatggc tcccttccag
     2761 ccgcgcgact cccgctgaca gtccaccagc gccaggtggt cggcgttgac ttcagggatc
     2821 agcagcggga cgtccggatc catccggtgg gttcgcgtgt tcgtcaccac gatcgcgccg
     2881 gcccgtgcga aggcctgctc gatggtgccc gcgacctccg catcgagtgc ggagaagacg
     2941 atgcgcccgg gcagcggggg agcgcagtcc cgcacgatca tgccggcaat gctacgtggc
     3001 agggggaccg gctcccgcca gcgcaccacc tcctcatacg gcttcccagc gcttgccgac
     3061 gaggctgcaa ccgcagccag ctcgaaccag ggatgatccg ccagcagtcg cacgaatttc
     3121 tggcccaccg taccggtggc gccaagaatc gagaccggga tccgttcacc catggcggtc
     3181 gcgcgcgagc aggtccgagg cgagccgcac gtagagctcc actccatgga gcaggtcggc
     3241 ttttcggatg tgctcctggc tggtatgagc gacccggatg gttccggggc cgagctggta
     3301 gcgctccccc caggcgtgga ggaagggaag atcgctggcg tagctcacca cggtggtgtc
     3361 ccacccggcg ggcgcgcttc cacctttatg gaatggcagc tctaccccga attccaccgt
     3421 cactccgggg atgaggagcg agcggatcgc tgccttgagc ggctcggtgg gcgcgaccgt
     3481 ccggatcagc aactgagcag ttgccgcggg gggaatgacg ttcggagcga cgccgccgcc
     3541 gatcaggccc aggttgaggg tggactgccc gagaagggga tcggccggca ggggcatccg
     3601 ccggatccgt tcgatcgtgt cgagcagggc ggcgatggca ctcacgccct cgtcggggta
     3661 ggccgaatgt gctgcccgcc cggtggcttc gaggtccacg cgcagggaac ctttctggcc
     3721 gatcgaaagc cggttctcgg taggctctcc attgatgagg aagcgccctt tcggccccag
     3781 ctcgttcgcg gcgcgggcgc catccgatcc gttttcctcg cccaccagga aaaggagccc
     3841 gatgcggcgc tcgccccgct ccgccaatcg ctcggccgcg gcgaccatcg ctgcggccag
     3901 ccccttcgcg tcgcagctcc cgcggccgtg gatcgagtcg gcgtcttcgc gcagcggcac
     3961 gtacggtggc accgtgtcga gatgggtgga gaagaccagc tcgggcggct cccgaaaggc
     4021 atagagattg tggcggccgg ccgacaccgg ttggcgaacg accttatacc ccccgctccg
     4081 cagtgtgctg tcgagcagat cggtggccgc accctcggag ccggtgggtg tctccagggc
     4141 cacgagggca cgggtgagtt cgagtgcgtc catgaacgag agcgccccgc caacggcatg
     4201 cgcggcgggg ctcctggtct tcgagaaaac tccagctgct ctacgcggaa ccagtcgcgc
     4261 cgccactcct ccgcttcatc tcacgtccgc gcttcgctcc gggtgcggtg cgacgcggcg
     4321 tagtgaacat ctcgatggcg atcagcatgg cggcatctgg tgacaggtcg ctgtaagcta
     4381 gggaatgggt ctgggcgcgg caagtggcgc ggagtcgcgc cgcaatcggc ggaaattcac
     4441 gctgggttcc gaccaattca cgtttccttc acacctccgc catatcctcc agctcagcgg
     4501 tttgacacga tgaccgcgcc acagctcggg gccttgactg gaggttacaa atgagcgtca
     4561 cgactttgtc acggatcatt gctgccttgt cggcgattac tctgcttggt gcctgcaacg
     4621 actcgttcag cccctcggcg agcgttcctt cctttgaagg tctcacggtg gttccgcagt
     4681 cggccacgat ccaggcgggc caggtggtgg ccttgaaggc cagactgatc gacgagaacg
     4741 gcgatcagct ccgcgaagtg gcgaccagct ggatgagcag caacgagaca gtcgccacgg
     4801 tcgccgccag cggagaggtc cttggccgtg gagcggggcg cgcgatcatc accgcaaccg
     4861 cgcaaggtaa gtctcaaact gccgccattc atgtgctgga taggccgtca aagccggaac
     4921 ccaagggaga gaactgaggg tgctcggccg gatcaacgaa cacgcaggag ctgagtcggc
     4981 tggctaggtg gcgcgtaccg tcccccggtc ggccgctcgg gcaatccgct ggccctcctc
     5041 cacgttcacc ggccagagca gcaacgcccc gacggcaaag aagatgatca ccgacagaat
     5101 ggcattccga ctcgaccctg tcgcggcgat cgtccccgca aaaatcagcg gaccaaagat
     5161 tccggcaaac ttctcgaata cgctgaagaa tccgaaaaac tcgcccgact tgtggcgggg
     5221 aatcatgctg gcgaacaagg agcggctgag cgcctgggtg ccgccctgaa ccgtacccac
     5281 cagtccagcg agcacgtaaa aatggaaggc ggtcttcatg aagtagccga ggaggctgat
     5341 cgccgtgtag gccatgagtc caagaaagag cgcgcgcttg gcgccgatgc ggtgggccag
     5401 catgccgaac agaaaggagc agggaatccc cacgaattgc accagcagga tagccccgat
     5461 cagcgcgctc tgtccgatcc cgatctcggt gccataggcc gttgccatct tgatgatggt
     5521 ttgaatgcca tcgttgtaga tcaggaaggc cagcagcaga agaaaggcat tgcgatagct
     5581 tcggagctcg cggaacgact cagccaggcg cacgaatgcc atcttgaccg gattctcatc
     5641 tcggcgctca tcgggctcga ggagggccgg tggctcgggc accttccgga ataacggtag
     5701 cgagaaaaca acccaccaca ccgccaccga tacgaaggca aggcgcaccg gcagcgtcgc
     5761 ttgctcctca ctcagccccg gcccgtgcgg cagcccgaac cagtcgggcc gctggatcca
     5821 cgccagattg aacgccagca gaacgccccc gccgaagtag ccgagcgcgt agccggcagt
     5881 cgagagccgg tcgatctctc ccggccgggc gacgtgcggc agcaacgctt catagaatac
     5941 gaagcttccc gccaccccga tgagcgacac cgtcaacagc accgaggcga ggtccaggtc
     6001 tccgtgatga atgaagaaca tggcgaggac ggcaccgacg ccgatcccca tgaagagcgc
     6061 cagaaaccgc ttcttggccg ctcgataatc ggagatcgcc ccgagtatgg gagacagcag
     6121 ggctatgaag acgagcgcga ggctgttcac cagggcgagc cgttgggtgg cgccactctc
     6181 agccaggccg gacccggcga ccttcacgaa atagatgggg aagacggcga ccatgatggt
     6241 cgtctgcatc gccgatgcag cccagtcgta catggcccag gcccggagct cgggacggtc
     6301 gaggccgagc cgggatagga gagaggactt aggcatggac ggagaagcta gaggtgctcg
     6361 ggccggccgg taagagtcgg gacgcacacg cttccggact catgctttgg tgtccgccgg
     6421 ccgacaatca ggctatacgc ctccatcgcc cgaaggaggt cagtagcagg cagtggccgc
     6481 gcggctcagg ctgcgccgtg aatgatccgc caatcggctt gggtacccgc ctggtgggac
     6541 tgattcaccc caagcccgag tctcggcgcg atggacaaag gttccttcct cagctcgcct
     6601 gtgatgaagg gtgcggtcag cttcggctgc gcgctccttc tgggcctgcc cgtccccgct
     6661 cgatcacaga cacccgcgcc gggtctcgac tcgcaaaaac ccattaccca atacgtccac
     6721 gacgtctggc agatcgatca gggactgccg cagaacagtg tgttggctat ggctcagacc
     6781 cgcgacggat atctctggat cggcaccgaa gcgggattgg cccggttcga tggggtggcg
     6841 ttcaccacct ataactcgac gaactccggt ggactctctg acacctacgt gagctcgctc
     6901 ctggcggagg gggcggacga tctctgggcc ggcacctggg tcggcggtat agcccgcttc
     6961 aaggggagca agtccagtgg tgtagcgggg acgtccggct cgatcgtgaa ttgcctctac
     7021 cgagaccgcg ccggcaccct ctgggccggg cgtggtgccg ggctcgagcg atggagcgag
     7081 gggcggttcc attcggtccc cggcacggaa cgggacgtgt acacgctggc ggaagacgcc
     7141 aatggcgccc tgttgatcgg gaccgagcgt gggatacaga ctttgcagca tggtcgcatc
     7201 gttccccggc agccggcggg tggccggatc gctggaccgg tatggacgat ctaccgggac
     7261 cgagagggaa gcctctggtt cggcacctct gacgcgctct accgcgcggc caacggaaag
     7321 ctcgatcgct tcacgaccgc cgacggtctc ccgcccggtg gcgtcagcgc gatcgtcggg
     7381 acccagaacg gtcagctctg gattggcacc aacggtggcg ggctcgcccg ctttgccgcc
     7441 ggccggttcg agcggttcac cacccgggac ggcctgtcgg atgatgcggt ctcggcgctc
     7501 ctcgaggatc gggaaggaag cctctgggta ggaacccagc acggcggcct caaccggttc
     7561 cgcgagccga ttctcaccat ctacagcagg cgtcaagggc tctccgcgaa tgtcatctgg
     7621 tcggtgtacg gagatcggca gcaggcgctg tggatcggga cccaggaggg cggactcaac
     7681 cgtttccagg gtggccggtt cacggcctac actgtcaaag acggcctccc cagcaactcg
     7741 gtgttcgcca cactgcaaac ctcggatggg gtgctttggg tggggacgaa tgaggggatc
     7801 gcccggcttc gtcacggccg ctgggagaac ctgggtgccg caggagcatt tcccaaaagg
     7861 cgggtggcag cgttcctcga ggaccgaacc ggcgcgctct ggatcggcgg caaggatggt
     7921 ctctatcggt ggaagaatgg ccgcctgcac gactattccc aggaagccgg cgtcgaggcc
     7981 gccgtcgcta cggcaagcgt ccgtacgatc gttgaagatc aggagggaag tctgtggatc
     8041 ggcacccacg gccgaggact gatccgccgg cgaaacggcc ggttcacgac attcaccacc
     8101 aagcagggac tctcggacga tgtagtcgag tcgctgtacg ctgacgagca cgggctctgg
     8161 gtcggtaccg tgagtggtct caacctggtg caagacgggc gcatcaccat ccttcctctc
     8221 agtgctaccg tgttcatgac cgaca
//
LOCUS       DASYRV010000433         2295 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_590412, whole genome shotgun sequence.
ACCESSION   DASYRV010000433 DASYRV010000000
VERSION     DASYRV010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2295
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_590412"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            148..>2295
                     /gene="dnaE"
                     /locus_tag="VGQ24_11670"
     CDS             148..>2295
                     /gene="dnaE"
                     /locus_tag="VGQ24_11670"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEV8455546.1"
                     /translation="MPVRAEQNETPLNRLAGDRDGLILLSRHTGLLEQILRLSGPENL
                     YAELRPGRERHAVLAAARRLRLPIVATNGVVAAHAEEWSRHRLLRAIALNTTLSALPS
                     EEVWPTQSWLCPTDDLARHFPDCSDALNAAAEIAERCTYSIPVGHRIVPPRLADTGGA
                     FAQLRELTLDGARWRYPVITPALQERLDLELGIIGQKGFADYFLVVRDIVRNGPTHCG
                     RGSVANSVVSYCLGITHVDPIGSKLVFERFLNLERSDPPDIDLDFPWDERDKVLAYVF
                     RRYPRLHSAMVANHNTVQPRGALREVAKVHGRPAGEIREVTRRIPYFYETGERLADLV
                     AAHPNFRGLHLATSWQEYARIAEGLVGLPRHLSVHAGGVVITPTPLTDYVPVESAAKT
                     LTDDPDLPVPVIQFEKDGTEDAGLVKIDLLGNRSLAVIRDAIDAVHGHTSHRIDYTSS
                     VAGQDEGAKALFRTGKTMGVFYTESPASRLLCAKSQADTFELLVLNTSMIRPASNKYI
                     RLYLERLRNRAPYEPLDPSLRDTLLESFGIMVYQEDVVNVCATFAGMSPATGDGLRKA
                     LSKKRPAKHLGAYAEEFFTGAMRLGRNPEAAKRVWEMIMSFAGYSFCKGHSCSYIQIA
                     QHACALRANHPAEFMAAVLSNGGGFYQPFAYVAEAMRMGLTILPPDVNASDFRCLGKG
                     REIRIGLQFVKGLSADAVERVIAARDSGAAGQRG"
BASE COUNT          397 a          761 c          729 g          408 t
ORIGIN      
        1 ctcaacgagc gcggatgggg tgccctctgc cgcgctatta ctcgaatcca ttggacccgc
       61 agcggagcct ggacgggcgt gccgggtgag gagggcgcgc aaggggcggt gaggccgggt
      121 tgtcaggcgc gacccgacga aatcggcatg cccgtccggg cggagcagaa cgaaacaccg
      181 ttgaaccggc tggccggtga ccgcgacggt ctcatccttc tctcgcgtca cactggcctt
      241 ctggagcaga tactccggct cagcgggccc gagaatctct acgccgagct ccggcccggc
      301 cgagagcgtc acgcggtgct cgccgcggca cgccggctcc ggctgcctat tgtcgccacc
      361 aatggagtcg tagcggcaca cgcggaggag tggagtcgtc accgcctgct gcgcgcgata
      421 gcgctgaaca ccaccctgtc ggccttaccg tccgaggagg tctggcctac ccaatcctgg
      481 ctctgcccaa ccgatgacct ggcccggcac tttcccgatt gttcggatgc gctaaatgcc
      541 gcggccgaga tcgcggagcg ttgtacctat agcatcccgg tcggccatcg tatcgtcccg
      601 ccccgcctgg ccgataccgg gggcgccttc gcgcagcttc gggagctgac gctcgatgga
      661 gccaggtggc gctacccggt catcaccccc gcgctgcagg agagactcga tctcgagctt
      721 ggcatcatcg ggcagaaggg attcgccgac tatttcctgg tagtgcgcga catcgtccgg
      781 aatggaccga cccattgcgg ccggggctcg gtggcaaatt cggtggtgag ctattgtctc
      841 ggcatcaccc acgtggaccc catcggctcc aagctcgtct tcgagcgctt tctcaatctc
      901 gagcggagcg atccacccga catcgatctc gactttccct gggacgagcg cgacaaggtc
      961 ctggcctacg tctttcgccg gtatccccgg ctgcactcgg caatggtcgc caaccacaac
     1021 acggtccagc ctcgcggtgc actgcgtgag gtggcaaagg tgcatggacg gccggccggt
     1081 gagatccggg aggtcacccg gcgcattccc tatttctatg agactggcga gcggctggcg
     1141 gatctggtgg cggcccatcc caattttcgc gggctccatc tggccaccag ctggcaggaa
     1201 tacgcccgca tcgccgaagg cctggtaggg ctccctcgtc atctatcggt tcacgccggc
     1261 ggcgtcgtga tcacgccgac accgctcacc gactacgtgc ccgtggagtc cgcggccaag
     1321 acgctcaccg acgatcccga tctcccagtc ccggtcattc aattcgagaa ggacggcacc
     1381 gaggacgccg gtctggtgaa gatcgacctc ctgggcaacc ggtcgctcgc ggtaatccgc
     1441 gatgccatcg acgcggtcca cgggcatacg agccatcgga tcgactacac ctcgtcggtg
     1501 gcaggccagg atgagggagc caaggcgctg ttccgtaccg gcaagaccat gggggtcttc
     1561 tacaccgagt ctcccgcatc acggctcctc tgcgccaaga gtcaggcaga caccttcgag
     1621 ctgctggtgc tcaataccag catgatccgg cctgcctcga acaagtacat ccggctctat
     1681 ctcgagcggc tgcgaaacag agcgccttac gaaccgcttg atccatcact ccgagatact
     1741 ctgctcgaat cgtttggcat catggtctac caggaggacg tggtgaacgt ctgcgccacg
     1801 tttgcgggaa tgtcccccgc caccggcgac ggactccgca aggcgctctc caagaagcgc
     1861 cccgccaagc atctcggcgc ctatgccgag gagttcttca ccggcgcgat gcggctggga
     1921 cggaatcccg aagcggccaa gcgggtctgg gagatgatca tgtccttcgc gggctacagc
     1981 ttctgcaagg gacactcgtg ctcctacatc cagatcgccc agcatgcctg cgcgctccgg
     2041 gccaaccatc ccgcggagtt catggccgcg gtgctgtcca atggtggcgg cttctatcag
     2101 ccgtttgcct atgtggcgga ggccatgcgg atgggcctca ccatcctgcc tcccgatgtc
     2161 aacgccagcg atttccgctg cctcggcaag ggacgagaga tccggatcgg gttgcagttc
     2221 gtgaagggat tgtcggcgga cgcggtggag cgggtgatcg ctgcgagaga cagcggggca
     2281 gcggggcagc ggggc
//
LOCUS       DASYRV010000434         7262 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1840828, whole genome shotgun sequence.
ACCESSION   DASYRV010000434 DASYRV010000000
VERSION     DASYRV010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7262
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1840828"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            124..723
                     /gene="coaE"
                     /locus_tag="VGQ24_11675"
     CDS             124..723
                     /gene="coaE"
                     /locus_tag="VGQ24_11675"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: protein motif:HMM:TIGR00152.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEV8455547.1"
                     /translation="MLSVALTGNVGAGKSTVAELFKRWGATVIDADQLVREAQSPGQP
                     VLAKIVARFGEELLGPDGALDRAALRARVLADAQALADLNRIVHPEVHRRRQELLAEA
                     RARGDRIVVSDIPLLFESADPAEFNVIVLVDAPEAVRRARLLATRTLRPEEADRLIAA
                     QLSSTPKRARSDYVIENDGDLPALERAASAVWDALVARA"
     gene            777..1166
                     /gene="gcvH"
                     /locus_tag="VGQ24_11680"
     CDS             777..1166
                     /gene="gcvH"
                     /locus_tag="VGQ24_11680"
                     /inference="COORDINATES: protein motif:HMM:NF002270.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEV8455548.1"
                     /translation="MSNVPDDLLYTPEHEYVASTTDAAIVRVGITDYAQGELGDVVFV
                     RLPKQGEHVTAHQSFGEIEAVKAVSELYSPVTGEVTEINDALDSDSGVVNRDPYGDGW
                     MVKLRVSNPAQLKELMSPKAYRSHIGE"
     gene            1208..4111
                     /gene="gcvP"
                     /locus_tag="VGQ24_11685"
     CDS             1208..4111
                     /gene="gcvP"
                     /locus_tag="VGQ24_11685"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HEV8455549.1"
                     /translation="MTSVLARKLSNPTLDVLHPSHFAYRHIGPRRADVDEMLELLGYE
                     SLESFIDAVVPDEIRLHRPLALPPGRSEREVLQALRGIAGMNQVFRSYIGMGYAGCFT
                     PQVIQRNVLENPGWYTAYTPYQAEIAQGRLEALLNFQTMVSDLTGLEVANASLLDEAT
                     AAAEAMNLSLAVHPKKDHPVYLVDERCHPQTIAVVQTRAEARGIDVRVGDPAPFEFGP
                     DVIGALVQYPATDGQVRNFRPLCERAHAAGALVTAATDLLSLTLLTPPGEWGADVAVG
                     NSQRFGVPMGYGGPHAAFFATRDAHKRFLPGRIIGVSKDRDGRPALRMALQTREQHIR
                     RDKATSNVCTAQVLLAVMASMYAVYHGPSGLRRIAERVHTRTVILANALRRLRYRLVH
                     EDFFDTICIEVEGWAVPRLLDAARVRNINLRQLSSTRICVALDETVTLGDVADLISIF
                     SLNEALPFMLDDIGVKRERAIPQGLARTTSFMEHPVFHRYHSETEMLRYIKRLEARDL
                     SLTSAMIPLGSCTMKLNATTEMMPVSWREFNRLHPFAPRDQAAGYQLLFNQLEYQLAE
                     ITGFAAVSLQPNAGSQGEYAGLLVIRAYHRSRGESHRTTCLIPQSAHGTNPASAVMAG
                     MQVVAIKSDPQGNIDLKDLGAKAAAHKDTLAALMITYPSTHGVFEGSVREICRIVHEH
                     GGQVYMDGANMNAQVGLCRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVAAHLVA
                     FLPGHPVVDLNHPAAFGTVSAAPWGSSAILPISWAYIALMGYDGLTEATCIAILSANY
                     VARRLADHYPLLYTGQNGLVAHECIIDTRPFKASAGVDVEDIAKRIIDYGFHPPTVSF
                     PVPGTLMIEPTESESKEELDRFCDALIAIREEIREIEEGRAQRDNNLLTNAPHTLEQV
                     IADGWDRPYPRERAAYPSRAVREHKVWPTVGRIDSAFGDRNLVCSCPPVEAYG"
     gene            4284..5012
                     /locus_tag="VGQ24_11690"
     CDS             4284..5012
                     /locus_tag="VGQ24_11690"
                     /inference="COORDINATES: protein motif:HMM:NF015084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455550.1"
                     /translation="MAIDQTILDRAELHGESWLRLYAWEPHCLSFGRHEPATRRYDAE
                     RIAALGIATVRRPTGGRAVWHGPELTYAVAAPSPRFGSLQEAYLEIHDMIGRALGELG
                     IDAVLASSRGSVPLDAGACFSQPAGGELLVGGRKVVGSAQLRQGGALLQHGSILLADG
                     QHIVRELMRGSAGDDPFSSLRETALPLLGRSLAAAELAEEIADTAAARWPGSWNRSTA
                     ASEVIEAASRHYPRFRSPAWTWAR"
     gene            5009..6652
                     /locus_tag="VGQ24_11695"
     CDS             5009..6652
                     /locus_tag="VGQ24_11695"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEV8455551.1"
                     /translation="MSMGRAAVIAALVGGSAWHPAEGQARAEERNSIVIVTGLQATLP
                     IPTLMEGAAANVANMEIADQLFLRLAGLGPTLLTAGDRNFVPLLASSWSRRDSVTLVF
                     DLNPRARWQDGVPVTARDVVFTMERARKRSVSPRLAELLKHITAVTAEGERRVVFCFS
                     HPYAEQLYDATFHVAPIPAHLLDTIPPDALSRSAFAAQPLGDGPYRWVRSVPGQFIEL
                     RRNDDFFLGKPKIERVIVRAAADPDARVNLMLSGQADAMDNIPPPQDNIRRIGAEPSL
                     RLIPVPSPTIGYLLFNQRDRRDRERPHPILRDIRVRRAIGLALDRQLLVQVIFGSYGE
                     VPYGPASPILWIRHGAPRPERQDRPEARRLLAAAGWRDTDGDGTLDREGHPLALSISL
                     PNTSAIRKQMSVLIQEQLRSIGIRLELQQYDFPVWTERRTAGDFDLDFAALSQDPSPT
                     GLTQSWTCNGGNNVARYCDPRVDSLIEQAVLGRGDPAQHWHAVLRQIEADAPAVFLYA
                     PTYVYAVNRRFRNVSLSPVSSWLRLREWSVAPATSTPSR"
     gene            6654..>7262
                     /locus_tag="VGQ24_11700"
     CDS             6654..>7262
                     /locus_tag="VGQ24_11700"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8455552.1"
                     /translation="MSGWLLRRALQAAVTFLVALVILFVLMRAAPGDPLLRLGGDRPI
                     SPREIAVLRARYGLDQPVGTQLASFLQGLVHGDLGVSIEYGRPVTALLGERLPATLLL
                     GGSVLLLNFTVGLWLGVRQAVRRGRREDRWLTTLSLAGYAMPSFWLGLVLAWLVGIHW
                     RLLPAAGMQDPLLSSDAGWGTRAADVLSHLVLPALTLSVVSIA"
BASE COUNT         1178 a         2479 c         2376 g         1229 t
ORIGIN      
        1 ccaccctccc gtctgttcca tttctctgct atgaaactag ggttccgcga ctggcgatct
       61 tcattggccg gtgatccctc tgtgtccctc tgtgcctcgg tggtgaattc cttaccttcc
      121 aggatgctct cggtcgcgct aaccggcaat gtcggggccg gaaaatccac agtggctgag
      181 ctgttcaagc gctggggagc taccgtaatc gacgccgatc agctggtgag ggaagcccag
      241 tcgccgggcc agccagtgct ggcaaagatc gtggcgcggt ttggggagga gctgctgggg
      301 ccggacggcg ccctcgaccg cgcggcgctg cgggcccggg tgctcgcgga tgcacaggcg
      361 ctagccgatc tcaaccgcat cgttcatccg gaggtgcacc ggcgccggca ggagctgctc
      421 gccgaggccc gggcccgggg cgaccggatc gtggtgagcg acatccccct cctcttcgag
      481 tcggccgatc cggccgagtt caacgtcatc gtgctggtgg atgcgcccga ggcggtgcgg
      541 cgggcccgtc ttctggccac ccgaacgctg cggccggagg aagcagaccg tctcatcgca
      601 gcgcagctgt cgtccactcc aaagcgagcc cggagcgatt acgtgatcga gaatgacggt
      661 gacctgcccg cgctcgagcg tgcagcgtcc gccgtgtggg atgcactcgt cgcgcgcgct
      721 tgacctcgtc ctccgctccg cctatcctcc gtcgcgcaac cacatcggag agcgcggtgt
      781 cgaacgtacc ggacgatctg ctttataccc ccgaacacga atatgtcgcg agcaccaccg
      841 atgccgcgat cgtgcgggtc ggcatcaccg actacgccca gggtgaatta ggcgacgtgg
      901 tcttcgtccg gcttccgaag caaggcgagc acgtcaccgc tcaccagtca ttcggtgaga
      961 tcgaagccgt caaagccgtc tccgagctgt acagccccgt caccggcgaa gtcaccgaga
     1021 tcaacgatgc gctcgacagc gactcggggg tggtgaaccg cgacccctac ggcgacgggt
     1081 ggatggtcaa gctccgggtg tccaacccgg cccagctgaa agagctgatg tcgcccaagg
     1141 cataccggtc ccacatcgga gagtaagcgt cgatccgcaa ggccccacca ggagcaccac
     1201 tctcaccatg accagcgttc ttgctcgtaa gctgagtaac cccaccctcg acgtcctcca
     1261 tccatcgcac ttcgcatacc ggcacatcgg gccccggcgc gccgacgtgg atgagatgct
     1321 cgagctgctc ggctatgaat cgctcgagag cttcatcgat gcggtcgtcc ccgatgagat
     1381 ccgcctccac cgtccgctgg cactcccgcc gggacggagc gagcgggagg tgctccaggc
     1441 gcttcggggg atcgccggga tgaaccaggt attccgttcc tatatcggaa tgggatatgc
     1501 cggctgcttt acccctcagg tgatccagcg caacgtgctg gagaacccgg gttggtacac
     1561 cgcctacacc ccatatcagg ccgagatcgc ccagggccgg ctcgaggcgc tgctcaactt
     1621 tcagacgatg gtgtcggatc tgaccgggct cgaggtcgcc aatgcctcgc tgctggacga
     1681 agccacggct gcggcggagg cgatgaacct gagccttgcg gtgcacccca agaaggacca
     1741 tccggtgtac ctggtagacg agcgctgcca tccgcagacc atcgcggtgg tgcagacccg
     1801 ggccgaagcc cgcggcatcg acgtcagggt gggcgacccc gcaccgttcg agttcgggcc
     1861 ggacgtgatc ggcgcgttgg tgcagtaccc ggccaccgac ggtcaggtcc gaaactttcg
     1921 gccactctgc gagcgggctc atgctgccgg cgcgctcgtc accgccgcca ccgacctgct
     1981 gagcctgacc ctgctcaccc caccaggcga gtggggtgcc gacgtggcgg tcgggaacag
     2041 ccagcgcttc ggcgtgccga tgggctacgg cggcccgcat gccgcgttct tcgccacccg
     2101 cgacgctcac aagcgattcc tgcccggccg gatcatcggc gtctccaagg accgggacgg
     2161 gcgtcccgct cttcggatgg cgctgcagac ccgggagcag cacatccggc gggacaaggc
     2221 aaccagcaac gtgtgcaccg cccaggtatt gctcgcggtg atggccagca tgtacgccgt
     2281 atatcacggg ccgtccgggc tccggcgcat tgccgaacgg gtgcacacgc ggacggtgat
     2341 cctggccaac gcgctgcgcc ggctgcggta ccggctggtt cacgaagact tcttcgacac
     2401 catctgcatc gaggtggaag gctgggccgt gccccggctg ctcgatgccg cccgggtgcg
     2461 caacatcaac ctgcgtcagc tctcgtccac ccgcatctgt gtggcgctcg acgagacggt
     2521 caccctgggc gacgtggccg acctgatctc gatcttctca ctgaacgagg cgctgccgtt
     2581 catgctggac gacatcgggg tcaagcgcga gcgcgcgatc ccgcaggggc tcgctcgcac
     2641 cacgtccttc atggagcatc cggtctttca ccgataccac tccgaaaccg agatgctccg
     2701 ctacatcaag cgtctcgagg cgcgcgacct atcgctcacc tcagccatga tcccgcttgg
     2761 ctcgtgcacc atgaagctca acgccacgac cgagatgatg ccggtgagct ggcgcgagtt
     2821 caaccggctc catcccttcg cgccgcggga ccaggcggcc ggctaccagc tgctcttcaa
     2881 ccagctggag taccagctag ccgagatcac cgggtttgcg gcggtgtcgc tccagcccaa
     2941 cgcggggtcg cagggcgagt atgccggact gctggtcatc cgcgcgtatc accgatccag
     3001 aggcgagtcc caccgcacca cctgcctcat cccgcagtcc gctcatggca ccaacccggc
     3061 cagtgcggtg atggcaggta tgcaggtggt ggcgatcaag agcgacccgc agggcaacat
     3121 cgatctcaag gatctcggcg ccaaggccgc cgcgcacaag gacaccctgg cggcactgat
     3181 gatcacgtac ccctcgaccc acggggtgtt cgagggatcg gtgcgggaga tctgccggat
     3241 cgtgcacgag cacgggggcc aggtctacat ggacggagcc aacatgaacg cgcaggtcgg
     3301 cctctgccgt ccgggtgaca tcggtgccga cgtctgtcac ctgaacctgc acaagacgtt
     3361 ctgcattccg catggtggcg gaggtcccgg gatgggcccg atcggagtgg cggcgcacct
     3421 ggttgcgttc ctgcccggac atccggtggt ggatctgaat caccccgcgg cgttcggaac
     3481 cgtgtccgcc gcgccctggg ggagctccgc gattctcccg atctcgtggg cctacattgc
     3541 cctgatgggc tacgacggcc tgaccgaggc cacctgtatc gccattctca gcgcgaacta
     3601 cgtcgcccgc cgcctggcgg accactatcc cctgctctac accgggcaga acggcctggt
     3661 tgcccacgag tgcatcatcg acacccgccc cttcaaggcc tccgccgggg tggacgtcga
     3721 ggatatcgcc aagcggatca tcgattacgg cttccacccg ccaacggtct cgtttccggt
     3781 ccccggcacg ctcatgatcg agccgaccga gagcgagtcg aaggaagagc tggaccgctt
     3841 ttgtgacgct ctcatcgcca tccgcgagga gattcgagag atcgaggagg gacgggcaca
     3901 gcgggacaac aatctcctga ccaacgcgcc tcacaccctg gagcaggtca tcgccgatgg
     3961 atgggaccgg ccctatccgc gggagcgggc cgcctatccc tcgcgagcgg tgcgcgagca
     4021 caaggtgtgg cccacggtgg gacggatcga cagtgccttc ggggatcgta atctggtctg
     4081 tagctgtcct cctgtcgaag catatggata ggagcgagga acccgctgtc accctgagcc
     4141 cttcggctgc gctcagggca ggctccgcga gggggcggag ctcaattcgg actccggccc
     4201 cctcggtcgc tacgctccct cagggtgaca atcatgaatg gttcctctgg gtagatgaaa
     4261 ctccgcgccc cggctgggcc aacatggcca tcgatcaaac catcctcgac cgcgcggagc
     4321 tgcacggcga aagctggctg cgcttgtacg cctgggagcc acactgtctc tcattcggca
     4381 ggcacgagcc cgccacccgg cgctatgatg cggagcggat cgcggcgctg ggcatcgcta
     4441 cggtgcggcg gccaaccggc gggcgggccg tctggcacgg acccgagctc acctacgcgg
     4501 tcgcggcacc gagtcctcgc ttcggttcac tgcaggaggc ctatctcgag atccatgaca
     4561 tgatcggccg tgcgctcggg gagctcggca tcgacgcggt gctggcgtcg agtcgcgggt
     4621 cggtgccgct cgacgccgga gcctgcttct ctcaacccgc cggcggtgag ctgctggtcg
     4681 gcgggcgcaa ggtcgttggg agcgcgcaac tccggcaggg tggggcgctg ctccagcacg
     4741 gctcgatcct actcgcggac gggcagcaca tcgttaggga gctgatgcga ggatccgcgg
     4801 gcgacgaccc cttcagcagc ctgcgggaaa cagctctgcc gctgctgggc cgatcactcg
     4861 ccgcggcgga gctggcggag gagatcgcgg ataccgcagc tgctcgctgg ccaggcagct
     4921 ggaatcgatc gactgctgcc agcgaggtga tcgaggctgc gtcgcggcac tatccccggt
     4981 tccgctctcc agcgtggacc tgggcgagat gagtatggga cgcgccgccg tcattgcagc
     5041 cctcgtgggg ggctccgcct ggcatccggc cgaggggcag gcacgcgcgg aggagcgaaa
     5101 cagcatcgtc atcgtcacgg gtctccaggc cacgcttccg attcccacgc tgatggaagg
     5161 cgcggcagcc aatgtcgcca acatggagat tgccgaccag ctcttcctgc ggctggcggg
     5221 gctcggcccc acactgctga ccgccggcga ccggaacttc gtgccactgc tggcgagctc
     5281 gtggtcgcgg cgagactcgg tgacgctcgt attcgacctg aatccgcggg cacgatggca
     5341 agacggcgtg ccggtgacgg cacgggacgt ggtgttcacc atggagcgcg cacgcaagcg
     5401 gtcggtctcg ccccgattgg ccgagctgct gaagcacatc accgcggtga cggccgaagg
     5461 agagcggcgg gtggtgtttt gtttctccca tccctatgcg gagcagctct acgacgcgac
     5521 cttccacgtc gcccccatcc cggcccacct gctggacacg ataccgccgg acgcgctctc
     5581 ccgatcggcc tttgcggcgc agccgctcgg tgatggcccg taccgctggg ttcggagcgt
     5641 ccccggacag ttcatcgagc tcagaaggaa cgacgacttc ttcctcggca agccgaagat
     5701 cgagcgcgtc atcgtgcgag ccgcggccga tcccgacgcg cgggtgaatc tcatgctcag
     5761 cgggcaggcc gatgccatgg acaacatccc tccgccgcag gacaacatcc ggcgcattgg
     5821 cgcggagccc tcgctgcggc tgataccggt tccctctccc accatcggct atctcctttt
     5881 caaccagcgc gaccggcgtg accgcgagcg gcctcatccg atcctgaggg acatcagagt
     5941 ccggcgtgcc atcgggctcg ccctcgatcg ccagctcctg gtgcaggtga tcttcggatc
     6001 ctacggcgag gtgccctatg gaccggcctc gccgatcctg tggatccgtc acggcgcccc
     6061 ccggcccgag cgtcaggatc ggcccgaagc gcgccggctg ctggcagcgg cgggatggcg
     6121 ggacacagac ggcgacggca ccctcgatcg cgagggacat ccgctcgcgc tgagcatttc
     6181 gctgccgaat accagcgcca ttcgcaaaca gatgtcggta ctgatccagg agcagctgcg
     6241 cagcatcggc atcaggctgg agctccagca gtacgacttt ccggtctgga ccgagcggcg
     6301 gacggcggga gacttcgatc tcgatttcgc cgcgctgagc caggatccgt caccgacggg
     6361 actcacccag agctggacct gcaacggcgg caataacgtc gcccggtact gcgatccgcg
     6421 ggtcgattcg ctgatcgagc aggcggtgct gggccgggga gatccggctc agcactggca
     6481 cgcggtgctc cgtcaaatcg aagcagatgc accggctgtc tttctctacg cgcccaccta
     6541 cgtgtacgcg gtgaaccggc gctttcggaa cgtgagcctc agcccggtgt cctcctggct
     6601 gcggctccgc gaatggtcgg tcgccccggc aacctccacc ccgagccgct gaggtgagcg
     6661 gttggctgct ccgccgggcg ctccaggcgg cagtcacctt cctggtggcg ctcgtgatcc
     6721 tgttcgtcct catgcgtgcc gcgcctggcg atcccttgct gcgcctgggt ggagaccgtc
     6781 ccatctcgcc gagagagatc gcggtcctcc gtgcccgcta cggtctcgat cagccggtcg
     6841 gcacccagct ggcctccttc ctccagggtc tagtccacgg cgacctcggt gtgtcgatcg
     6901 agtatggacg gccggtcacc gcgctcctcg gggaacgcct gcccgccacc ctgctgctcg
     6961 gcgggagcgt cctgctgctc aacttcacgg tcgggctctg gctgggcgtg cggcaagcag
     7021 tccggcgggg tcggagagag gatcgctggc tcaccacgct cagccttgcc ggatacgcga
     7081 tgccgtcgtt ctggctgggc ctggtgctcg cgtggctggt tgggattcac tggcggctgc
     7141 tgcccgcagc aggcatgcag gatccgctgc tgagctccga cgcaggttgg ggcacgcggg
     7201 ccgctgacgt gctcagccac ctggtgctgc ccgcgctgac cttgtcggtg gtaagcatcg
     7261 cg
//
LOCUS       DASYRV010000435         3631 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1131330, whole genome shotgun sequence.
ACCESSION   DASYRV010000435 DASYRV010000000
VERSION     DASYRV010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3631
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1131330"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1413)
                     /locus_tag="VGQ24_11705"
     CDS             complement(<1..1413)
                     /locus_tag="VGQ24_11705"
                     /inference="COORDINATES: protein motif:HMM:NF023853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase III"
                     /protein_id="HEV8455553.1"
                     /translation="MTTPARSLNGGPMADERVDSIFGSDIFSRSMMRKRLPKEVYRSL
                     LRTIDRGEPLDPAVADVVAASMKDWAIENGATHYTHWFQPLTGLTAEKHDSLVAPDGV
                     GGVVFNFSGSELVQGEPDASSFPSGGLRATFEARGYTAWDATSPAFLMRGDNNVTLCI
                     PTAFVSWTGEALDTKIPLLRSVEALSQQGMRILRIFGTDAGVSRIVTTVGPEQEYFLV
                     DRELFYQRPDLLTCERTLFGAKPPKGQQLEDHYFGTIPPRVLAFMAEAERELYRLGVP
                     VKTRHNEVAPGQYEIAPLFEASHIASDHQMLLMETLKRVAPRYGLQALLHEKPFAGVN
                     GSGKHNNWSMSTDTGVNLLDPQDETHTNMQFLVFLCATIRAVDLHADLLRASIASAAN
                     DHRLGANEAPPAIISIFLGKMLTDILEQVEAGLPKRTIRGGVLDLGAKTLPMLPRHSG
                     DRNRTSPFAFTGNKFEFRAVG"
     gene            complement(1469..2464)
                     /gene="cysK"
                     /locus_tag="VGQ24_11710"
     CDS             complement(1469..2464)
                     /gene="cysK"
                     /locus_tag="VGQ24_11710"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEV8455554.1"
                     /translation="MPHGKIYEDVTETVGNTPLIRLVRLAAGLPGKVAVKHEGYNPFN
                     SVKDRIGAAMINDAVEKGRLRPGMIIVEPTSGNTGIGLAYVAAARGFRCIFTMPDTMT
                     IERRHMLRALGAKVVLTEGPKGMKGAIARAEEILARLGDRAWMPRQFDNAANPAIHYR
                     TTGPEIWEDTSGGVDIFVSGVGTGGTITGAGRYLRERKPGIRIVAVEPAESPVLSGGQ
                     PSPHKQQGIGAGFVPSILDTKIYDEVIKVTNDDAIAVTRRLAREEAIFAGISSGSITW
                     AALQVASRRENAGKLIVSIIADFGERYLSHPVYTELSDPDISDLDDALAAPAAIA"
     gene            complement(2713..>3631)
                     /locus_tag="VGQ24_11715"
     CDS             complement(2713..>3631)
                     /locus_tag="VGQ24_11715"
                     /inference="COORDINATES: protein motif:HMM:NF015692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HEV8455555.1"
                     /translation="VEAQPPEVAGEYVDQWLRAGRAGERAHPRFPFGQYSDDTQLSRE
                     LLCSFRERGGWDPAAFAVRLAELFRERRDVGAGRGTRAAALRLLAGIPWDESGTSAPY
                     AGNGSAMRAGPLGILLPDRSAMMRAAREQSRITHLDPRCAAGAITIAAAVALAARREP
                     VDPAAFLSDIAGCVESDDTSVAEAIRGLEEWVALEPPAAARHVHDAGLDPAHMDRWQG
                     ISAFVTPSVLWSLYAFLHSPDDYWETICVAIGVGGDTDTMAAMAGAMSGARLGVRSLP
                     QDLIGQLTDQGDWGADKLAELALSCAALL"
BASE COUNT          629 a         1168 c         1218 g          616 t
ORIGIN      
        1 gcccactgcc cggaactcga acttgttccc ggtgaacgca aagggagagg tccggttacg
       61 gtcgcccgaa tgtcgcggca acatcggtag tgtcttcgcg ccaagatcca gaaccccgcc
      121 ccggatagta cgcttgggaa gtccggcctc cacctgctcc aggatgtcgg tcagcatctt
      181 ccccaggaag atggagatga tcgccggcgg cgcctcgttg gcacccagcc gatggtcgtt
      241 ggctgccgag gcaatggagg cacggagcag atcggcatgg aggtccaccg cgcggatggt
      301 cgcgcacagg aacaccagga actgcatgtt ggtgtgtgtc tcgtcctggg gatcgagcag
      361 attgacgccg gtatcggtgg acatcgacca gttgttgtgc ttgcccgagc cattcacacc
      421 ggcgaatggc ttctcgtgca acagcgcctg gagcccgtac cggggcgcca cccgcttcaa
      481 cgtctccatc agcaacatct ggtggtcgct ggcaatgtgg ctcgcctcga acagcggggc
      541 gatctcgtac tggcccggcg ccacttcgtt atggcgagtc ttgaccggaa cgccgagccg
      601 gtagagctcc cgctccgcct ctgccatgaa ggcgaggacg cggggcggga tggtgccgaa
      661 atagtgatcc tcgagttgct gacccttggg gggcttggcg ccgaaaaggg tgcgctcgca
      721 ggtgagcagg tcgggccgct ggtagaacag ctcgcgatct accaggaagt actcctgttc
      781 cggacccacc gtcgtgacga tacgggagac ccccgcgtcg gtgccgaaga tccggaggat
      841 gcgcataccc tgctgcgaga gtgcctcgac tgagcgcagc agggggatct tggtgtccag
      901 ggcctcgccg gtccaggata cgaacgcagt cgggatgcag agggtgacgt tgttgtcgcc
      961 ccgcatgaga aaggccggac tggtggcgtc ccacgccgtg tacccgcggg cctcgaaggt
     1021 ggcccgcagc cctcccgagg gaaagctcga cgcatccggc tcaccctgta ccagctccga
     1081 gccggagaaa ttgaatacca ctccaccaac gccgtccggc gcgacgagcg agtcatgttt
     1141 ctcggcagtc aggccagtga gcggctggaa ccagtgggtg tagtgcgtcg cgccgttctc
     1201 gatggcccag tccttcatcg atgcggcgac gacatcggcc acagcagggt caagcggctc
     1261 gccccgatcg atggtgcgga gcaggctgcg gtagacctcc ttgggaagcc gcttgcgcat
     1321 catgctgcgg gagaagatgt cgctgccgaa gatagaatcg acccgctcgt cggccatggg
     1381 accgccgttg agtgaacgcg caggggtggt cacaggtgct cgtcgcctcg tgcgtgagag
     1441 gtgtggtgaa cgcgaaaccg gacgcggttc aggctatcgc cgcaggcgca gccagcgcgt
     1501 cgtcgagatc ggagatatcg ggatccgaaa gctcggtata gaccgggtgt gagaggtaac
     1561 gttcgccgaa atcggcgatg atcgacacga tcagcttgcc ggcgttctcc cgcctgctcg
     1621 ccacctggag cgccgcccag gtgatcgatc cgctggagat accggcgaag atcgcctctt
     1681 cccgagccaa ccgccgggtc acggcgatgg cgtcgtcgtt ggtcaccttg atcacctcgt
     1741 cgtagatctt ggtgtccagg atgctgggaa cgaacccggc gccaatgccc tgctgcttgt
     1801 ggggtgaggg ttggccgccc gagagcaccg ggctctcggc cggctcgacc gccacgatcc
     1861 ggatgccagg cttccgctcg cgcagatatc gccccgctcc cgtaatggtg cccccggtgc
     1921 cgacgcccga cacgaagatg tccaccccgc cgctggtgtc ctcccagatc tccggccccg
     1981 tggtgcggta atggatggcg gggttggccg cattatcgaa ctggcgcggc atccaggccc
     2041 gatcgccgag gcgagccagg atctcctcgg cccgggcaat ggctcctttc atccccttgg
     2101 gtccctcggt caacacaacc ttggcgccga gtgcccggag catatgacgc cgctcgatcg
     2161 tcatcgtgtc cggcatggtg aagatacagc gaaagccgcg ggccgcggcc acataggcca
     2221 ggccgatacc ggtgttcccg ctggttggct ccacgatgat cataccgggg cgaagccggc
     2281 ccttctcgac cgcatcgttg atcatcgccg ccccgatgcg atccttcacc gaattgaacg
     2341 gattgtaacc ctcgtgcttg acggcgacct tgccgggtag accggcggca agtcggacga
     2401 gccggatcaa gggggtgttc ccgacggttt cggtcacatc ctcgtagatc ttgccgtgcg
     2461 gcatgagcgc ctcgacagct gaatggcggg gagaagtcgg gatccgtagc gcaagaataa
     2521 tcacagctat tggctattgg ctattggctg ttggctgtgg ttggctatta gggcggggcg
     2581 gccggcggag ctgggctgag ccccgagggc tgagcgcaag gggcagggtt gggggaggtc
     2641 ggcgctcgaa gcccgaggga ctccgaccag ttccgccggt ccagggcggg gtggcgtgaa
     2701 acttcatcgt tcttagagaa gcgcggcgca cgacagcgcc agttcggcga gcttgtcagc
     2761 accccaatct ccttgatcgg tcagctggcc aatcaagtct tgcggaagcg acctgacacc
     2821 gagccttgcg ccgctcatcg caccggccat ggccgccatc gtatcggtat cgccacccac
     2881 gccgatggcc acgcagatcg tctcccaata gtcatcgggt gaatgcagga aggcgtacag
     2941 gctccagagc acgctgggag tgacgaaggc ggagatgcct tgccaccggt ccatgtgcgc
     3001 cggatcaagt cccgcatcgt gcacgtggcg tgcggctgcg ggcggctcga gcgcgaccca
     3061 ctcctccagg ccgcggatcg cctccgccac cgaggtatcg tcgctctcca cgcacccggc
     3121 aatgtcggac aggaaggctg cggggtcgac gggttcccgc cgagccgcga gcgctacggc
     3181 agccgcgata gtgatggcgc ccgcggcaca acgaggatcc aggtgggtga tccggctctg
     3241 ctcccgagca gctcgcatca tggcgctgcg atcgggcagc aggattccga gcgggccggc
     3301 ccgcatggcg ctcccgttgc cggcatatgg agcggatgtg cccgactcgt cccaagggat
     3361 ccccgcgagc agccgcagcg cggcggcccg agtccctcgt cccgcgccca cgtcgcgccg
     3421 ctcgcggaaa agctccgcca gccgaaccgc aaacgccgcg gggtcccagc cgccgcgctc
     3481 gcgaaagctg cacagcagct cccgagacag ttgggtatcg tcgctgtatt gaccgaaggg
     3541 aaaccgcgga tgggctcgct ctccagcgcg gccggcacgg agccactggt ccacatactc
     3601 cccggctacc tcgggtggct gagcctcgac c
//
LOCUS       DASYRV010000436         2609 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_591045, whole genome shotgun sequence.
ACCESSION   DASYRV010000436 DASYRV010000000
VERSION     DASYRV010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2609
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_591045"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="VGQ24_11720"
     CDS             complement(<1..182)
                     /locus_tag="VGQ24_11720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455556.1"
                     /translation="MRTRCGYLCALTSGLALCVTPAGAQRVSLSPTIGVYIPTSELVK
                     AANGEEFKQEIALAVGG"
     gene            complement(322..990)
                     /locus_tag="VGQ24_11725"
     CDS             complement(322..990)
                     /locus_tag="VGQ24_11725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455557.1"
                     /translation="MRASPVIVLAFALATAQAGGAQSAPTPSAVGDSTTPAATAAPKK
                     KGMFGKIKGLAKNKVVKTVAKAALCTAVPGGQVIAGALDAAETKNVAGAATTAVTGGS
                     SSCMPGMTANGMAGAAAAAGMGAAAGGGGGVPGMPGGMPGGAMPGTAMSPEQMKQMME
                     QYSKMGMDPAQIQAMQQMMGAMPGAPTAATAAGAPAAEPASRAHPDTGQGPDGDAPAS
                     RDAR"
     gene            1073..1342
                     /locus_tag="VGQ24_11730"
     CDS             1073..1342
                     /locus_tag="VGQ24_11730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455558.1"
                     /translation="MSIHWPDGDDGIGERFEYFMIRLTRSDKGSGPVAEMVERLGSGQ
                     EQSFETGDQLFQMVDGWFAFDLNLQPATGHSNTGDRGFYQLAAWR"
     gene            complement(1346..1825)
                     /locus_tag="VGQ24_11735"
     CDS             complement(1346..1825)
                     /locus_tag="VGQ24_11735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455559.1"
                     /translation="MPKPSPGPKPDPMAGVVDRLLAQLPGLHSEPHISAARPRAAGQW
                     TTPVSVPRAEPTSQSRLIGVWVRVLLGLALGVMMGAWPYLRTCGLPLAGYLGAVVTVI
                     LSGGWSARAAWRYRAGLAHVVSLIIMFYGILLAGSELLPRTGYAVDRATWGCEEARQ"
     gene            complement(2135..>2609)
                     /locus_tag="VGQ24_11740"
     CDS             complement(2135..>2609)
                     /locus_tag="VGQ24_11740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TCP-1/cpn60 chaperonin family protein"
                     /protein_id="HEV8455560.1"
                     /translation="TEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRAQAGLDKLK
                     GTEDEKIGVEIVRRALEEPIRMIAQNAGAEGSIVVARVKESKEKNFGYNAATDVYEDL
                     VKAGVIDPTKVTRTALQNAASIAGLLLTTECVVVEKKEDKPAPAAPPGGGMGGMY"
BASE COUNT          429 a          918 c          778 g          484 t
ORIGIN      
        1 ccgcccaccg cgagcgcgat ttcctgcttg aactcctccc cgttagcggc cttcaccagc
       61 tcgctggtgg ggatgtacac cccaatggtg ggggagagcg agacccgctg ggctccggcg
      121 ggagtgacgc acaaagccag accactggtg agggcgcaca ggtaaccgca acgggttcgc
      181 atactccctc ctctgttcat cgggtttctc acttgctctc cgacaccacg atccatacat
      241 ccttgtccgc ctccgccatc ggagacactg agtagtacgg cgagaccgaa gatgggtccg
      301 ccgtccgcgc ccaacgcttc gctaccgggc atcccgggaa gccggcgcat caccatccgg
      361 cccttgtccc gtatcagggt gggcccgact tgctggttcg gcagccggcg ctcctgccgc
      421 tgttgccgcc gtcggggcgc cgggcatcgc acccatcatc tgctgcatcg cctggatctg
      481 cgcgggatcc atccccatct tgctgtactg ctccatcatc tgtttcatct gctcaggcga
      541 catggccgtc cccggcatcg cgccgccagg catcccgccg ggcatccccg gcactccgcc
      601 cccgccccct gctgcggccc ccattccggc agctgcagcc gctccggcca ttccattcgc
      661 ggtcatcccc ggcatgcagc tgctgctccc cccggtcacc gcagtcgtag ctgctcctgc
      721 aacgttcttc gtctcggcag cgtcaagcgc tccggcgatg acttgaccac cggggaccgc
      781 ggtgcagagc gcagccttgg ccacggtctt gaccaccttg ttcttggcca gtcccttgat
      841 cttgccgaac atgcctttct tcttcggagc tgctgtcgcg gcaggtgtag ttgagtcacc
      901 gaccgcggag ggagtgggcg ccgactgcgc cccaccggcc tgggcggtgg cgagcgcgaa
      961 ggcaagcacg atcaccgggc tggcacgcat ggtctctcct tgttgacgtt tcgtgctatc
     1021 tacaaggtca gaaccggcac ccgacaccga caacggcgct ggggtagacg cgatgtcgat
     1081 tcattggccg gatggcgacg acgggatcgg ggagcgtttc gagtacttca tgattcgtct
     1141 gacccgctcg gacaaggggt cggggccggt cgccgaaatg gtcgagcgac tcggctccgg
     1201 acaggagcaa agcttcgaga ccggcgatca gctgtttcaa atggtcgacg gatggttcgc
     1261 ctttgacctc aacttgcagc ccgcgaccgg gcatagcaat accggtgacc gcgggttcta
     1321 ccaactcgcc gcttggcgat agcccctact ggcgggcctc ctcgcacccc cacgtggcac
     1381 gatcgaccgc gtagccggtc cgcggaagca gctccgaccc cgccagcaaa atcccataga
     1441 acatgatgat gagtgacacg acgtgggcga gaccggctcg ataccgccag gccgcgcgtg
     1501 cggaccatcc tccggagagt atgaccgtaa cgacggcgcc gagataccca gccaggggca
     1561 gtccgcaggt tctgaggtaa ggccatgccc ccatcatcac gcctagagcc aggccgagaa
     1621 gcacccgtac ccagactccg atgagccggc tttgcgacgt aggttcggcg cgaggaacgg
     1681 agacgggagt ggtccactgg ccggctgccc gtggtcgcgc agctgagatg tgaggttcgc
     1741 tgtgtagacc cggcagctgc gcgagcagac ggtccaccac tcccgccatc ggatcgggct
     1801 tcgggccggg tgaaggcttt ggcatgccgc tccactcgtt gaggggtggt actgcgaggc
     1861 attcaaccag gcccggcatt tgtcgtacca acgctcgacc tggcgtaagt ggttgggcgg
     1921 ccgctgccgt gcgacctcct gcagcctcgc gatccaccat catcgcggtg aattacgcct
     1981 ccctcctgca atcggcccga cgaccgaaca agaaacgccc cggggacatg accccggggc
     2041 gttctcgtta cgagatcctt cgcctttcgg ctcaggatac aagatcggct gcaaacttag
     2101 agcgggatac cgctccgctc taagtttggc cgatctagta cattccgccc atgccgccgc
     2161 ccggaggcgc ggccggagcc ggcttgtctt ccttcttctc caccaccacg cactcggtgg
     2221 tgagcagaag ccccgcaatc gacgcggcgt tctgcagcgc cgtccgagtc accttggtcg
     2281 gatcgatgac accggccttg accagatcct catacacgtc ggttgcggca ttgtagccga
     2341 agttcttctc cttcgactcc ttgacccgcg caaccacgat cgacccctcc gcccccgcgt
     2401 tctgggcgat catccggata ggctcctcca gcgcccggcg cacgatctcg acgccgatct
     2461 tctcgtcctc ggtgcccttg agcttatcga ggccagcctg tgcccggatc agagcaacac
     2521 caccgccggg gacgatgcct tcctcgactg cggcacgggt ggcgtgcagc gcgtcctcga
     2581 cccgagcctt cttctccttc atctcggtc
//
LOCUS       DASYRV010000437         2087 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1841351, whole genome shotgun sequence.
ACCESSION   DASYRV010000437 DASYRV010000000
VERSION     DASYRV010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1841351"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            297..614
                     /locus_tag="VGQ24_11745"
     CDS             297..614
                     /locus_tag="VGQ24_11745"
                     /inference="COORDINATES: protein motif:HMM:NF013964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease signature motif containing
                     protein"
                     /protein_id="HEV8455561.1"
                     /translation="MGGPSEPLDVGRRTPVVSTPLRRAVALRDGTCRFPACTRPHVWC
                     DAHHAIHWADGGKTALSNLVLLCRPHHVLVHEGGFGLSMVAGKPVFRRPDGSVLEDGR
                     APP"
     gene            complement(1060..1578)
                     /locus_tag="VGQ24_11750"
     CDS             complement(1060..1578)
                     /locus_tag="VGQ24_11750"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEV8455562.1"
                     /translation="MSPGQEPSIREELRAVAAGGAIARRRIHPPTSPHLILNPVWLPP
                     AKGFAHVVVPAHGLLVFLGGQAGHRPDGTLAGESLLEQFDQACGNVVEALAAAGGRPE
                     HIVSMQIFVTDGDEYRASLEEIGERWRRHFDRHYPAMSLLEVEGLFDPGALVELMGTA
                     VIPEETPEAEPV"
     gene            complement(1596..>2087)
                     /locus_tag="VGQ24_11755"
     CDS             complement(1596..>2087)
                     /locus_tag="VGQ24_11755"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEV8455563.1"
                     /translation="PIIAAVNGVAAGAGAVIALAADIRLLAASASFAFLFTKVGLAGA
                     DMGSAYLLPRLVGFGRATELLMLGDTIDAQRASEIGLATSVVEDGELPARAKDLARRL
                     ATGPALAYAATKVLLSKELDMNLAGSIELEAMTQALLMKSADHAEFYEAFQLGRDPKW
                     TGR"
BASE COUNT          341 a          712 c          690 g          344 t
ORIGIN      
        1 tgcaggccat cgtggatgcc gaccttcgcg ctggaaccgg cacggacctg aggactccga
       61 cccaacgacg ggcggatgcc ctctgcgagt tggcccatcg gtacctccgg tctccggaac
      121 gccccgccgt atcgggggag cggccacacg tcacgctgac agtgagcatc gagacgcttc
      181 gcggtgcgaa gacgccccgg gtcgtgccag gccgatgcga actcgatccc acgggggcgg
      241 tcccgctgga gacagcccgg cggatcgcct gcgatgcatc gatccttcct gtggtgatgg
      301 gcgggccctc cgaaccactt gatgtgggca ggaggacgcc tgtggtctcg acaccgctac
      361 gacgggccgt cgccttgagg gacggtacat gccgattccc ggcatgcacc aggccccatg
      421 tgtggtgcga cgcacaccac gcaatccact gggccgatgg cgggaagacc gcgctttcca
      481 atctcgtgct gctgtgccgg ccgcatcacg tcctcgtgca cgaaggcgga ttcggcctga
      541 gcatggtggc cggcaagcca gtgttcaggc gtccggacgg ctcggtgctc gaggacggcc
      601 gggccccgcc ataggcaagc ggggtcgccg cgggctgccg cgcttgattt ccaagactgg
      661 gattggccgg tggagactag cctgaggcgc ggcgaatctc cacgacgaag gtgagctctt
      721 ggtgggcgat cttaccggtg atctcccagc accctggccg tcgagccggc ccctctcgat
      781 ggacaggctt ccctggatga gccgtaccca cccgaacttc tcgctcaact gctcgccggg
      841 aggcttgact gatgtgcatg ccgtaaagac gctcagggcc gtcacgatcc agagctgcca
      901 ttggcgccaa cccgatcgcg tcacacccgc ctccaccaga agaatgatcg ctgtgctgat
      961 tacgcctcag tggaaggctc ggttccagct ttcaggagga gtggtggagt tattgcgatg
     1021 ccttcggccc gaccccccgc ctcgcacacc aaagggaagt tagacgggct cagcttcggg
     1081 ggtttcctcg gggatgaccg ccgtacccat cagctcgacg agggcaccgg gatcgaacag
     1141 gccctcgacc tcgagcaggc tcatcgcggg atagtgccgg tcgaagtggc gccgccaccg
     1201 ctcgccgatc tcctccagcg aggcccggta ctcgtcgccg tccgtgacga agatctgcat
     1261 cgagacgatg tgctcgggcc ttcccccggc tgctgccagg gcctccacca cgttgccgca
     1321 cgcttggtcg aactgctcga ggagagactc gccggcaagg gtcccgtcgg gccggtgccc
     1381 ggcctgtcct cccaggaaga cgagcagccc gtgggcgggc acgacgacgt gggcgaaacc
     1441 cttggcagga gggagccaga ccggattcaa gatgaggtgg ggactggtcg gcgggtggat
     1501 cctccgccgc gcgatggcgc cccctgcggc caccgcccgc agctcttcac ggatggatgg
     1561 ttcctgaccc gggctcacag gtccctcctc gtcgctcatc gccccgtcca tttcgggtct
     1621 cgccccaatt ggaacgcttc atagaactcg gcgtgatcgg cgctcttcat aagtaatgcc
     1681 tgggtcattg cttcgagctc gatcgagccg gccaggttca tgtccagctc cttggacagg
     1741 agcaccttgg tggctgcgta cgccagagcc ggccccgtag ccaggcgccg ggctaggtcc
     1801 ttggcccggg ccgggagctc tccgtcctcc accaccgatg tggccaggcc gatctcggag
     1861 gcccgctgag cgtcgatcgt gtctccgagc atcaggagct cggtcgcccg cccaaatccc
     1921 accaggcgcg ggagcaggta cgccgaaccc atgtcggccc cggccagccc caccttggtg
     1981 aacagaaagg caaacgaggc cgaggctgcc agcaggcgga tgtctgcggc cagggcgatc
     2041 accgcgccgg caccggcggc cacgccgttg accgcggcga tgatcgg
//
LOCUS       DASYRV010000438         3006 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3702200, whole genome shotgun sequence.
ACCESSION   DASYRV010000438 DASYRV010000000
VERSION     DASYRV010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3006
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3702200"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..407)
                     /locus_tag="VGQ24_11760"
     CDS             complement(<1..407)
                     /locus_tag="VGQ24_11760"
                     /inference="COORDINATES: protein motif:HMM:NF024863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HEV8455564.1"
                     /translation="MPAPTLPLIMCFGDSLTAGFQSPTAECPDYQETPYGRFLAERLG
                     DRARVQISGVCGELTADMVDRFERDVVRHRPAWVVILGGTNDLGGSLQPAEIMRHLTA
                     MYEQAARAGIRVAAVTVPSIRGFDGHIPRRHEL"
     gene            complement(418..825)
                     /locus_tag="VGQ24_11765"
     CDS             complement(418..825)
                     /locus_tag="VGQ24_11765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455565.1"
                     /translation="MKKEYVIYALVVLLVWASRNSIPPRFQFWTTTNTMITVQNNSGQ
                     DLSDVTLVVWSEPHPLGTIKKDMAKNLKTPRLRDTTDVIIKFKYGSEPVERHVGTLEE
                     NSDYKMNIQVNFAGVVTAQFGTASAEGSDDKTK"
     gene            complement(920..1885)
                     /locus_tag="VGQ24_11770"
     CDS             complement(920..1885)
                     /locus_tag="VGQ24_11770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455566.1"
                     /translation="MIARTASASCTLLLCWALGPATSAEARHTNAHQEAVQAARSALF
                     DRKDPGLALRHLEGMWANTPTDRETPYLLGLAHFLLYDPDRALAMFDACLVLEGRDQS
                     VPQQRLDCLYWSARAYSLKAALAWYRRHSILDGVFKSRRASMIALDLYEQVLTQAPEH
                     VGALLGQAEYYMAAPYLPPLAYGDVDKARSFVARALALERDNVRAHYLQARLDLYYNG
                     RRDLARSGFATVRQLLDRGVGGAEAVLLRRWVDFAQAEVTFLDQDFPAAIAYTDAYLS
                     QVPDGAEGYALKGACLKFLGQQEAGDFLIKKARELNPLVRRYREP"
     gene            complement(1899..2228)
                     /locus_tag="VGQ24_11775"
     CDS             complement(1899..2228)
                     /locus_tag="VGQ24_11775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455567.1"
                     /translation="MTRRRAGLVLGLACVVALAGAWIWRTHQQGEVNFKACGALEPGG
                     QRADLVQILGAPTIIEANQAKTRVVLTFTSPLLAEKPIRAVVNVRDDVIMEIDCGDGR
                     IKSYDKY"
     gene            complement(2308..>3006)
                     /locus_tag="VGQ24_11780"
     CDS             complement(2308..>3006)
                     /locus_tag="VGQ24_11780"
                     /inference="COORDINATES: protein motif:HMM:TIGR00733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HEV8455568.1"
                     /translation="VVCCAAAMGGDNLQDLKTGHIVGSTPWKQQIMQVVGVATAAVVI
                     VPVLVLLRAKYGIGEATADHPHPLSAPQAMLMASLARGVFGGTLPWELVGLGAAIGIA
                     VILVDRRLAARGSDFRMPVLAVALGVYLPLKLSAAILAGGMVGALAKRRAGEPAAGGG
                     SRGLLFAAGLVTGEALMGILLAVPIALSGLWPTLGADPFQLFETPPLGGWPGVVVLAA
                     VAVLLHRTATARSR"
BASE COUNT          546 a         1030 c          916 g          514 t
ORIGIN      
        1 ttcagctcgt gccgccgcgg aatgtggccg tcgaatccgc ggatagacgg caccgtcacc
       61 gctgccaccc ggatgccggc cctggcggcc tgctcgtaca tcgcggtgag gtggcgcatg
      121 atctccgccg gctggaggct cccgcccaga tcgttggtcc cgccgagaat gaccacccag
      181 gcgggtcggt gacgcaccac gtcgcgctca aagcggtcga ccatgtccgc cgtcagctct
      241 ccgcagactc cgctgatctg gactcgcgcg cgatccccga gccgctccgc caggaaacgg
      301 ccgtagggcg tctcctggta gtcgggacat tcagcggtcg gagattggaa cccggcggtc
      361 aggctgtcgc cgaaacacat gatgagggga agcgtggggg caggcacgcg gcgggagcta
      421 cttggtcttg tcgtcgctgc cctctgctga agcagtcccg aactgggcgg tcacgacacc
      481 ggcgaaattc acctggatgt tcattttata gtcggagttc tcttccaggg tcccgacatg
      541 ccgctccacg ggctccgacc cgtacttgaa cttgatgatg acatcggtgg tatcacggag
      601 acggggcgtc ttgaggttct tggccatgtc cttcttgatg gtccccagcg ggtgcggctc
      661 cgaccagacg accagcgtca catccgaaag gtcttggccc gagttgttct gcacggtaat
      721 catcgtattg gtcgttgtcc agaactggaa tcgcggtggg atgctgttcc gactcgccca
      781 cacaaggagc acgaccagcg cgtaaatcac gtactctttc ttcatcggca ctccctttcg
      841 ccatggggca gcacagcgct acaggcttta cagtatacag agttacggga cagggtcaac
      901 cctaagttga attcaaggtt catggttctc ggtaccgacg cacgagggga ttgagctcgc
      961 gggctttttt gatcaagaaa tcccctgcct cctgctgacc cagaaacttg agacacgccc
     1021 ctttcagggc atagccttcg gccccgtccg gaacttggct gaggtacgcg tccgtatagg
     1081 cgatcgccgc cgggaagtcc tggtccagga aggtcacctc ggcctgtgcg aagtccaccc
     1141 accgccgcag gagcacggcc tccgcacctc ccacgccgcg atccaggagt tgccggaccg
     1201 tggcaaaccc gctccgcgcc aggtcacggc gcccgttata ataaagatcc aggcgggcct
     1261 ggaggtaatg ggctcggacg ttgtcccgtt ccagcgcgag tgcccgtgcg acgaacgaac
     1321 gggccttgtc aacatccccg taggccagcg gcggcaggta gggtgccgcc atgtagtact
     1381 cggcttgtcc gagcaacgcc ccgacatgct ccggcgcctg cgtcaacacc tgctcgtaca
     1441 gatccagcgc aatcatgctc gcgcgccggc tcttgaacac gccgtccagg atggagtgtc
     1501 ggcggtacca cgccagcgcg gccttcaagg aataagcccg agcgctccag tacaggcaat
     1561 cgagtcgctg ttgcggcacg ctctgatccc ggccctcgag gaccaggcat gcgtcgaaca
     1621 tcgccagcgc tcgatcggga tcatagagca ggaagtgggc cagccctagg aggtagggtg
     1681 tctccctgtc ggtgggtgtg ttcgcccaca tgccttcgag atgacgtagg gccaggccgg
     1741 gatctttccg gtcgaagagc gcgctccgcg ccgcctggac ggcctcttga tgagcattcg
     1801 tgtggcgcgc ttcggccgat gtggccgggc cgagagccca gcacagcagc aacgtgcacg
     1861 atgcggaggc cgtccgcgcg atcacggacc aaccgcgctc agtacttgtc ataggacttg
     1921 atacgcccgt caccgcaatc gatttccatg atcacgtcgt cgcgcacgtt cacgaccgcc
     1981 cggatgggct tctctgctag gagcgggctg gtaaacgtga ggaccacgcg cgtcttggcc
     2041 tggttggcct cgatgatggt cggcgcgccc aggatctgaa cgaggtccgc ccgctgaccg
     2101 cccggctcca gggcgccaca ggccttgaaa ttgacctcgc cctgctggtg cgttcgccag
     2161 atccacgcgc ccgccagcgc gaccacgcac gcgagcccca ggaccagccc ggcccgacgg
     2221 cgcgtcactg acaggacacc tgctcccaca aatgcaacga ccactcgatc atgtccgtca
     2281 gatggtacag gagtgagaag cctgtcatca acgactccgt gcggtcgccg ttcggtgcaa
     2341 cagcacggca acagccgcca gcacgaccac tcccggccat cctcccagcg gtggtgtctc
     2401 gaagagctgg aagggatccg cgcccaacgt cggccagagc ccgctcaggg cgatcggcac
     2461 tgccaacagg attcccatga gcgcttcgcc ggtcaccaga ccggcggcga acaggagacc
     2521 tcgcgagccc cctcccgccg ctggctcgcc tgctcttcgc ttcgccaacg cgccgaccat
     2581 gccgccggcc agaatcgccg cggagagctt cagcggcaga taaacaccca acgcgaccgc
     2641 gagcaccggc atccggaagt cagagcctcg cgccgccagc ctccggtcca ccagaatgac
     2701 ggcgatcccg atggccgcgc ccaagccgac caactcccac gggagcgtgc ctccgaacac
     2761 gccgcgcgcc aggctggcca tcagcatggc ttgcggcgcg ctcaagggat ggggatgatc
     2821 cgctgtcgcc tcgccgatgc cgtatttggc ccgcaacagg accaacaccg gcacgatcac
     2881 caccgcggca gtcgccaccc cgaccacttg catgatttgc tgcttccacg gcgtggatcc
     2941 cacgatgtgc cccgtcttga ggtcctgcag gttgtccccg cccattgccg ccgcgcaaca
     3001 cacgac
//
LOCUS       DASYRV010000439         3238 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3830999, whole genome shotgun sequence.
ACCESSION   DASYRV010000439 DASYRV010000000
VERSION     DASYRV010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3238
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3830999"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..469
                     /locus_tag="VGQ24_11785"
     CDS             <1..469
                     /locus_tag="VGQ24_11785"
                     /inference="COORDINATES: protein motif:HMM:NF014607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA repair protein RecO C-terminal
                     domain-containing protein"
                     /protein_id="HEV8455569.1"
                     /translation="EVMLRFAPPDPHPESFDLLQHALEQLETAASPEVEALGFRVLWQ
                     LVSVLGFAPSLDACVIDGTPLPDEGPLPFSTRDGGALCPTCAAQHGATQLPAAARSDL
                     VTLLDPAAPLPPLDARHGAAHRRLLARYIRYHLGEGADLPALEFWTQRAWAAA"
     gene            466..2310
                     /gene="selB"
                     /locus_tag="VGQ24_11790"
     CDS             466..2310
                     /gene="selB"
                     /locus_tag="VGQ24_11790"
                     /inference="COORDINATES: protein motif:HMM:TIGR00475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0001514 - selenocysteine incorporation
                     [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HEV8455570.1"
                     /translation="MIIGTAGHIDHGKSTLVTALTGKPMDRLAEERRRQITIDLNFAS
                     LDLGVGRMVGVVDVPGHEDFVRTMVAGASGIDLALLIVAADEGIMPQTEEHLAILEQL
                     GIPAGIPVLTKADLVDAEWLQLIALEIAERLAHSSVPFELPIAVSARSGAGLDALRER
                     LAARAAALAPRSSVDAFRLPIDRVFSLAGVGTVVTGTAWSGRLDVGDSVLILPSGLRG
                     RVRSLESYGKAAGHSEPGARTAVGIAGIDRAAVARGDVLVTDEFPWAAASAIDVEITL
                     QPGAVRPLTGRTRVRVLLGTAEVMARALPRAPISPGETGLARLSLEKPLLARAEDRFV
                     LRSYSPVTTIGGGRVLDPLPPRRRTPWPAGLASHDAGERFRSLLSRRPGGIRAPMLPI
                     ILGLSRSAASTVAHREPSARLLGDLWVTNASIEQVGTRALGLLKEYHRQHLSAAGMPL
                     ETLRHSLHAADVVVEAALADFGRAGRLRRTDGVVALAGFAPRVLGGDAEIDRVVGILL
                     DAHLTPPSIPELEQSTGRRDLLSLLRLAAASGRVEAVERDRYYTREALEQFTGVLKDL
                     GEKGSIIPAQVRDRLGISRKYLIPLLEWADGRGITVRVGEARELRAKV"
     gene            2497..2934
                     /locus_tag="VGQ24_11795"
     CDS             2497..2934
                     /locus_tag="VGQ24_11795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HEV8455571.1"
                     /translation="MVRFVWPGWWLGLLVGAESPVAAQANVIPPRVELKENYPNPFFP
                     ATTIPFTINSEVCARGHQPVVSLKVYNVLVQVVAIPTLGVGSSERVDSLRLRCGQYRA
                     FWDGKYLDGKREAITGVYYYQLTVDGERFTRKMIAQRKVVSPR"
BASE COUNT          513 a         1068 c         1081 g          576 t
ORIGIN      
        1 ggaggtaatg cttcgctttg ccccaccgga ccctcatccg gaaagcttcg acctccttca
       61 gcatgccctg gaacagctgg agaccgccgc gtcacccgaa gtcgaagcgc tgggcttccg
      121 ggttctctgg cagctcgtca gtgtcctcgg ctttgcaccg tcgctcgacg cctgcgtgat
      181 cgatggaact ccgctcccgg acgagggacc acttccgttc agcactcggg atggcggcgc
      241 cctctgcccc acgtgcgccg cacagcatgg cgctactcag ctgcccgccg cggcccggtc
      301 cgacctcgtg acgctgctgg atccggctgc tccactgccg ccactcgatg cgaggcatgg
      361 agcggcacac cgccggctgc tggcccgcta catccgctac caccttggcg agggagccga
      421 cctgccggcc ctcgagttct ggactcagcg ggcctgggcg gcagcatgat catcggcacc
      481 gcggggcata tcgaccacgg caagtccacg ctcgtcaccg cgctcaccgg gaaacccatg
      541 gaccggctgg ccgaggagcg ccgccgtcag atcaccatcg acctcaactt cgcgtcgctc
      601 gatctcggag taggccggat ggtgggggtc gtggacgtgc ccggtcacga ggacttcgtc
      661 cggaccatgg tcgccggtgc ctcgggcatc gatctcgcgc tcctgatcgt ggcggcggac
      721 gaggggatca tgccgcagac cgaggagcat cttgccattc tggaacagct cggcatcccc
      781 gcagggatac ccgtccttac caaggccgac ctggtggacg ctgaatggct ccaactcatc
      841 gcgctggaga tcgccgagcg tctggcacat tcgagtgtgc cgttcgagct gccgatagcg
      901 gtgtcggcca ggagtggggc cggcctcgac gctttgcgag agcgcctggc cgcgcgcgcc
      961 gctgccctgg ctccgcgctc gtcggtcgat gcgttcaggc tgcccatcga ccgggtcttc
     1021 tcccttgccg gcgtcggaac ggttgtcacc ggcaccgcct ggtccggccg actggacgtg
     1081 ggcgattccg tcctgattct tccatccggg ttgcgcggcc gggtgcgctc gctcgagagc
     1141 tacggaaagg cggcaggcca tagtgagccg ggagcgcgaa cggccgtggg catcgcaggg
     1201 atcgatcgtg ccgccgttgc gcggggtgac gtactagtga cggacgagtt tccctgggcg
     1261 gccgcctctg caatcgacgt cgagatcact ctccagcccg gggccgtccg gccgctgacc
     1321 ggccggaccc gtgtacgcgt gctcctcggg accgcggagg tgatggcgcg ggcgctgccg
     1381 cgcgcaccca tctcgccagg ggagacgggt ctggctcggc tgtcgctgga gaaaccgctg
     1441 ctggcacgcg ccgaggatcg gttcgtgctc cggagctaca gcccggtcac gacaatcggc
     1501 gggggccggg tgctcgatcc gctgccgcca cgccgccgga cgccgtggcc cgcgggtctg
     1561 gcctcccacg acgcgggcga gcgctttcgc agcctgctga gccgccggcc tggaggaatc
     1621 agagcgccga tgcttcccat cattctcggt ctctcgcggt cggccgcctc gacggtggct
     1681 catcgggagc ccagcgcccg cttactgggc gatctttggg tgacgaatgc gtccatagag
     1741 caggtcggga cccgcgcgct cgggctcctc aaggagtacc accggcagca tctcagcgcc
     1801 gcgggcatgc cgctcgagac gctgcggcat tcgcttcacg cggcggacgt ggtggtggaa
     1861 gccgcgctgg ccgattttgg tcgggccggc cgtctccgcc ggaccgacgg cgtcgtggcg
     1921 cttgcgggct tcgctccgcg ggtcctgggg ggggatgccg agatcgaccg cgtggtcggg
     1981 atcctcctcg atgcccatct caccccaccc tcgatccccg agctggagca atcaaccggc
     2041 cggcgcgatc tcctgtcact gctccgactg gctgccgcca gcggccgggt agaggcggtg
     2101 gaacgggatc ggtactacac ccgcgaagcg ttggagcaat tcaccggcgt gctgaaggat
     2161 ctgggcgaga agggctcgat cattccggct caggtgcgcg accggctcgg catcagccgc
     2221 aagtacctca ttccgttgtt ggagtgggcc gacggcaggg ggataactgt acgggtaggt
     2281 gaagccaggg agctaagagc aaaggtctag ggtccagggt ctagggtcga cttggttcta
     2341 gaccctagac tctagaccct agaccctaga ccatagactc tctcctcttg actccagact
     2401 ctctcctcta gactttcagc tttgaagact ccaacaccgc atcccgacca gcggaggtgc
     2461 cgccaccgtt tcaaacatct cgtatgagga gcgcccatgg tccgctttgt gtggccgggg
     2521 tggtggctcg ggcttctggt cggggcagaa tcccccgtgg cagcacaggc gaacgtgatc
     2581 ccgccgagag tcgagctgaa ggagaactac cccaatccgt tttttccggc gacgacgatt
     2641 ccgtttacga tcaattcgga ggtatgcgcc aggggtcatc aaccagtcgt cagtttgaag
     2701 gtgtacaatg tgctggtgca ggtcgtcgcc ataccgacgc tcggcgtcgg ctcgagcgag
     2761 agagtggaca gcctccgcct gcgatgcggt cagtaccggg ccttctggga tgggaagtac
     2821 ctggatggca aacgcgaggc catcaccggc gtctattact accagcttac ggtcgatggt
     2881 gagcggttca ccagaaagat gatcgctcag cggaaggtcg tcagtccgcg atgagtacga
     2941 aggggcagcc gaccaggccg ccccttcctg ttctcccgcc gcccgtgacg gatcagattt
     3001 tccccctgcc aaagcggcag agttcgcggg tacagccctt gccattcgct ggcgcaatcc
     3061 taaggttcca gtaaccgacg ttccggactc ggagcgccgg cggaaaatgt gcttgtgaga
     3121 ggaccatgat tcgacccgag cggctgacga tcaaggcgca ggaggcgctc cgcgacgcgc
     3181 tcgaattggc acgggagcgg ggcaatcctg tggtgaacga tgcgcacctc ttcgcggc
//
LOCUS       DASYRV010000440         7509 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3209077, whole genome shotgun sequence.
ACCESSION   DASYRV010000440 DASYRV010000000
VERSION     DASYRV010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7509
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3209077"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1221
                     /gene="gpmI"
                     /locus_tag="VGQ24_11800"
     CDS             <1..1221
                     /gene="gpmI"
                     /locus_tag="VGQ24_11800"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR01307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046537 -
                     2,3-bisphosphoglycerate-independent phosphoglycerate
                     mutase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HEV8455572.1"
                     /translation="GGTLHLVGLLGPGGVHALDRHLLACVELGVRHRVQAIAIHGFLD
                     GRDSAPTLGAEVVRTLLMDMRRIAGSKVDIATLTGRYYGMDRDRRWERTKLAYDAMVR
                     GAGTPVEHPVLAVQAAYQRGETDEFIHPLIHVRNGVPVGTMRDGDGVFFFNYRSDRMR
                     QIVAALAVDVFAGFDVSDRPRLSCVTMTQYDQTFAIPQAFPPFSLARILAGVLADQDR
                     TQFRTAETEKYPHVTYFFNGGYEPPYPGEERCLIPSQRVATYDLAPEMSAVGITDALC
                     RTIEAGTHDFLLCNYANADMVGHTGVLPAVIRAVETVDQCLTRVLASAEKTGTSVLIT
                     ADHGNCEMMIDPATGGIHTAHTTSPVPLVAVGVNPVSLRAGGSLRDVAPTVLGLLGIE
                     QPAEMTGRDLRECD"
     gene            1413..1994
                     /locus_tag="VGQ24_11805"
     CDS             1413..1994
                     /locus_tag="VGQ24_11805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455573.1"
                     /translation="MTVLGGYFSGDGGQFNIGPHDAAVFGVRYDIRTGGTIQFGLGIA
                     HGNLKRFIVDPFVPLANRKTGPVRQSVTFADVTLQFNITGGKSWHRIAPFVAASGGLA
                     LAGDTPADTSQYDFGRKFYFAPGAGVRVFLSDRLHLRAEARATFWKLNYPATFESAPV
                     AEPATPAVITDGKLTEWTSSSWLQIGLGYSFSP"
     gene            1997..2416
                     /locus_tag="VGQ24_11810"
     CDS             1997..2416
                     /locus_tag="VGQ24_11810"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HEV8455574.1"
                     /translation="MAASLTRTVSFHALHRYHRPDWSESRNREIFGPLADPPGHGHDY
                     QCAVTVTGQPDDSGMLVDLALLDRILQEEVLTPFAGKHFNLDVPAFAYGRPLPTCEAI
                     AAYVFRRIATRLPQGVVLERVRIAEDPTLYADCTGID"
     gene            2448..3179
                     /locus_tag="VGQ24_11815"
     CDS             2448..3179
                     /locus_tag="VGQ24_11815"
                     /inference="COORDINATES: protein motif:HMM:NF014671.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HEV8455575.1"
                     /translation="MSESAAVEEVAVWLEVNGRPVVTWMCTPDLLEELAIGWLHGEGY
                     IDSIDQVHLRPCATDLGFWATVPEERVAAVQAEGRKPVLASGCGAVSTFLADPSTVEA
                     RPARGEVPDLERLRALFKALFAKGERYKDTGGIHAAALVDHGSLSLIAHAEDIGRHNA
                     VDKSLGAALLARRPIAGLGLLVTGRISAELAFKAARAGLAYVATPSVPSTLAVEIARR
                     SGMVLVGRAVSGRPQHHGAVAPGAT"
     gene            3169..3582
                     /locus_tag="VGQ24_11820"
     CDS             3169..3582
                     /locus_tag="VGQ24_11820"
                     /inference="COORDINATES: protein motif:HMM:NF024773.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEV8455576.1"
                     /translation="MPPDRSRLAELVRNARRIAVVGLSPKPERPSHSVAAYLQRAGYT
                     IVPVHPAGGVTLGEPVHPDLRSAAAAGPIDIVNIFRRSEHVPALLGQLLEIRPPLVWM
                     QQGIRHDGVARSLESAGVVVVMDRCLAVDHQFLRA"
     gene            3582..4376
                     /locus_tag="VGQ24_11825"
     CDS             3582..4376
                     /locus_tag="VGQ24_11825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455577.1"
                     /translation="MHRRELIAVALMLGTAALPAWGQATKDEARLVFTISGGVVVGRH
                     LWSVDKEPAQFISPADTFAIGRRIRSTIGVAFGGTYFPGEHLGWNVEGFLIGLGFEDS
                     CRLVFSSGSGDAATACQSIQGATKSATAVTLSGGPVFRLNSRKQVSPYARANVGLVIS
                     NQSSLRTIGRFPTPLGTAERIIFADDHDSRIAASLALGAGFTAAVAKGYQLRWEVRDN
                     IVGVQRVTGSTPQSDMVPPHEVVYKHLFSMTIGFDVVLERRRGRRY"
     gene            4420..5073
                     /locus_tag="VGQ24_11830"
     CDS             4420..5073
                     /locus_tag="VGQ24_11830"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HEV8455578.1"
                     /translation="MRAHRGGSVEGIREGVRGAILAGGGATRFGGKPKGLELVGGERI
                     LDRLTRTLEAALGEPPLLVANAPGASEWRPDLRTVSDVRPGFGALGGIYTAVVEAPAP
                     VVCVAWDMPFVSESLIRALADGLKSADAVLPQSDGRRGVEPLCAAYGSACREAIAASL
                     AEDDLRAIGFHRRIRVGILPLDQVRALADPDLLFFNVNTADDLARADQLWRRRASSP"
     gene            5046..5579
                     /gene="mobB"
                     /locus_tag="VGQ24_11835"
     CDS             5046..5579
                     /gene="mobB"
                     /locus_tag="VGQ24_11835"
                     /inference="COORDINATES: protein motif:HMM:NF015181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HEV8455579.1"
                     /translation="MASTRIVSIIGRKNAGKTTLTVALASELVRRGHRVMTIKHGHHP
                     ADADRKGSDTWRHFHEGRAERVLIASPDLRVLFERSPDDYDPIALAQQYMQGADIVLT
                     EGYKAAPLPKIEVFRKAVPDPPIYNAASAEAEQWIAVVTDDRAFRAECTVLHFDDTFW
                     LQLLANLAWERSLTLDP"
     gene            5576..6829
                     /gene="glp"
                     /locus_tag="VGQ24_11840"
     CDS             5576..6829
                     /gene="glp"
                     /locus_tag="VGQ24_11840"
                     /inference="COORDINATES: protein motif:HMM:NF045515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HEV8455580.1"
                     /translation="MNAPLGAADAAIRILTEVRPQPALRIPLDDALDCVLAEDIVSRL
                     DIPAWTNSAMDGYAARGEDVRGATEDRPVPLRVVEQLPAGRFPEKVIGPGECARIFTG
                     APLPQGADSVIRQEDTNLGATTVLVLKDRDAGVNIRRAGEDIRNGTTVLTAGTELGPA
                     QLGVLASLAVAHPLVYRRPRVAILGSGDEIVDIDQPEEILSGRKIASSNTHTLVALVR
                     RAGGEPVNLGIAGDTPEDLRAHLTRALDCDLLVTTAGISVGEHDFVRSVLEELGGELR
                     FWKLRMRPGAPVGFGLLGRMPWIGLPGNPVSTMVTFELFVRPAIRRMMGHRLPFRRTV
                     AVRVTEPISLKPKLQHFLRGVVSHGAGGPEARLTGPQGSGILTSMTLANALLIIPEGQ
                     FETPAGATVQALILDDPVHQEEPGF"
     gene            7100..>7509
                     /locus_tag="VGQ24_11845"
     CDS             7100..>7509
                     /locus_tag="VGQ24_11845"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEV8455581.1"
                     /translation="MNNVKTFVLMAGLLGLFVLVGQLIGGSSGLVAALVIGSLFNFIM
                     YFFSDRLVLRMYGAHVVTAQEAPELYAMVDRLRQRAGLPMPRVAVAPHEQPNAFATGR
                     SPEHAVVAVTTGILKYVPQEELEGVIAHELAHIK"
BASE COUNT         1247 a         2469 c         2488 g         1305 t
ORIGIN      
        1 ggcggcacac tgcacctcgt gggtctgctc ggtcccggcg gagttcacgc gctcgatcgg
       61 catctgcttg cctgcgtcga gctcggcgtt cggcacaggg tacaagccat tgctatccat
      121 gggtttctgg atggccgcga ctccgctccg acgctcggtg ccgaggtggt gcgaaccctt
      181 ctgatggaca tgcgccggat cgccggcagc aaggtggaca ttgccaccct cacggggcgc
      241 tactatggaa tggaccggga ccggcgctgg gagcgcacca agctggccta cgacgcgatg
      301 gtccgggggg cgggcactcc cgtcgagcac ccggtgctgg cggtccaggc cgcctaccag
      361 cggggcgaaa cggacgagtt catccatcct ctgattcacg tgaggaatgg agtgcccgtt
      421 ggcaccatgc gcgatgggga cggggtcttc ttcttcaatt atcgcagcga tcggatgcgc
      481 caaatcgtcg ctgcgcttgc ggtagacgtt ttcgcgggct ttgacgtcag cgaccgtcct
      541 cgtctgtcct gcgtcaccat gacgcagtac gaccagacct ttgccattcc ccaggcattc
      601 ccgcccttca gcctggcgcg catccttgcc ggcgtgctcg cggatcagga ccgtacgcag
      661 ttcaggacgg cggaaaccga gaaataccca cacgtcacct atttcttcaa cggcggttac
      721 gagccgccgt atcccggaga ggagcgctgc ctgataccct cgcagcgggt cgcgacctac
      781 gatcttgccc cggagatgag cgcggtcggc atcacggacg cgctgtgccg caccatcgag
      841 gccggcacgc acgacttcct cctgtgcaac tacgccaacg cggacatggt cggccacacc
      901 ggcgtcctgc ccgctgtcat tcgcgccgtg gagacggtgg atcagtgcct cacccgggtg
      961 ctcgcgagtg ctgaaaagac cggcaccagc gtcctcatca ccgcggatca cggcaactgc
     1021 gagatgatga tcgacccggc gaccggcggg attcacaccg cgcacaccac gagcccagtg
     1081 cccctcgtgg ccgtcggcgt gaacccggtt tcgctccggg ccggtggatc gctgcgcgac
     1141 gtggccccga cggtgctggg gctgctggga attgagcaac cagcggagat gacaggtcgc
     1201 gacctgagag agtgcgactg atggagatac ggcggaatag gtccctcccc ttcgcgaagc
     1261 ctgccctcag cttagccgaa gggctcaggg tcgggatgag gatggtgctg cttgtgttcg
     1321 tgctcttcac atgcggagtc cctgctgtct ctgcccaggt gggccaccca ccccggtcct
     1381 caccataccg cgacatccgg aagggtcata ccgtgacggt tctcggaggc tacttctcgg
     1441 gtgacggcgg tcagttcaat atcggccccc atgacgccgc cgtcttcggt gtgcggtacg
     1501 acatccggac cggtggaacg attcagtttg ggctcggcat tgcgcacggc aacctgaagc
     1561 ggttcatcgt cgatccgttt gtgcccctgg ccaatcgcaa gaccggcccg gtcaggcagt
     1621 cggtcacctt cgccgacgtg acactccagt tcaacatcac cggcggcaag agctggcacc
     1681 ggattgcgcc cttcgtcgcg gcgagcggcg gtttggccct ggccggggac accccggccg
     1741 acaccagcca gtatgatttc ggccgcaagt tctatttcgc gcccggcgcc ggtgttcggg
     1801 tcttcctctc cgaccgtctc catcttcggg ctgaggccag ggccaccttc tggaagctca
     1861 attatccagc gacatttgag agtgcgcccg tggcggagcc ggcaacgccg gcggtgatta
     1921 ccgacggcaa gctgacggag tggacctcca gctcgtggct ccagatcggg ctgggttatt
     1981 cgttctcgcc ctagcgatgg cagcttctct cacccgcacg gtgagcttcc atgccttgca
     2041 ccgctaccac cggcccgatt ggagcgagtc acgtaaccgc gagatattcg gtccgctggc
     2101 cgacccgccc ggacatgggc acgattatca gtgcgccgtc accgtcaccg ggcaaccgga
     2161 cgactccggc atgctcgtgg atctggcgct gctcgatcgg atactccagg aggaggtcct
     2221 gacgccgttt gccgggaagc acttcaacct cgacgtcccg gcgttcgcct acgggcggcc
     2281 actgcccacc tgtgaagcga tcgccgccta cgtctttcgc cgcatagcta cccgtctgcc
     2341 gcagggcgtc gtgctcgagc gggtacgcat tgcggaggat ccaacgctgt atgccgactg
     2401 taccggaatc gactgatttg ctgcagcctg cgaagcgcgg cgggagaatg tccgagtccg
     2461 ccgcggtcga agaggtcgcc gtctggctgg aagtcaacgg ccgcccggta gtgacctgga
     2521 tgtgcactcc cgacctcctt gaggagctcg ccatcggctg gctccatggg gaaggctaca
     2581 tcgattccat cgatcaggtg catctgcgcc cctgtgccac tgacctcggc ttctgggcaa
     2641 ccgtgcccga agagcgggtt gcggcggtcc aggcggaggg acggaagcct gtgctggcat
     2701 cgggctgcgg agccgtctcc acctttctag cagatccctc cacggtcgag gccaggcccg
     2761 ccagaggcga ggtgccggat ctggaacggc ttcgcgccct gttcaaggcg ctgttcgcca
     2821 agggcgagcg ctacaaggac acgggtggta tccatgccgc ggcgctggtg gaccacggct
     2881 cgctatccct catcgctcac gcggaggaca ttgggcgtca caacgcggtg gacaaatcgc
     2941 tcggggcagc gctcctcgcc cggcgcccga tcgcgggcct cgggcttctc gtgaccggac
     3001 gtatctccgc ggagctcgcg tttaaggcgg cccgggcggg gttggcgtac gtcgccacac
     3061 catcggttcc cagcacgctg gcggtcgaga tcgccaggcg cagcggaatg gtgctggtgg
     3121 ggcgcgcggt cagcggacgc ccgcagcacc acggggcagt cgcgccaggt gccacctgat
     3181 cggagccggc tagccgagct ggtgcgcaat gcccggcgca tagcagtggt cggtttgagc
     3241 cccaaacccg aacggccgag tcacagcgtg gcggcatatc tccagcgagc cggctacacg
     3301 atcgtgccgg tccatcctgc gggcggcgtc accctgggcg agccggtgca ccccgacctg
     3361 cgttcggcag ccgcggccgg acccatcgat atcgtgaaca ttttccggcg ctcggagcat
     3421 gtcccagcgc tgctcgggca gcttctggaa atccgtccgc cgctggtctg gatgcagcag
     3481 ggaatccggc acgatggggt ggcgaggagt ctcgaatcgg ccggagttgt ggttgtgatg
     3541 gaccgctgcc ttgcggtaga ccaccaattc ctgagggctt gatgcaccgc cgagagctca
     3601 tcgccgtcgc cctcatgctg gggaccgccg ctctccccgc ctggggccag gccaccaagg
     3661 acgaggcccg gctggttttc acgatctccg gtggcgtggt ggtaggacgg cacctctggt
     3721 ccgtggataa agagcccgcc cagttcatca gcccggcgga caccttcgcc atcgggcggc
     3781 gcattcgatc caccatcggg gtggcattcg gtggcaccta tttcccgggt gagcacctcg
     3841 gctggaacgt ggaaggcttc ctcatcgggc tcggcttcga ggacagctgc cgtctagtgt
     3901 tctcgtcagg ctcgggcgat gcggccactg cctgccagtc gattcagggc gcaaccaagt
     3961 cggccacggc cgtgaccctc tccggcggcc cggtattccg cctcaacagc aggaagcagg
     4021 tctcgcccta tgcgcgggcc aatgtgggac tggtgatcag caaccagagc tcgttgcgga
     4081 cgattggacg attccccacc ccgctaggaa cggcggagcg gattatcttc gccgacgatc
     4141 acgacagtcg gatagccgcc tcactcgcgc tcggcgccgg attcaccgcc gccgtggcga
     4201 agggctatca gctccgctgg gaggtccgag acaacatcgt cggggtgcag cgcgtcaccg
     4261 ggagcacacc acaatcggat atggtccccc cgcacgaagt ggtttacaag catctcttca
     4321 gcatgacgat cgggttcgac gtcgtgctgg agcggcggag aggcagacgg tattgatgta
     4381 gaggcccgca cagcctgccc tgagcaatgc gaaggggccg tgcgggcgca ccgcggggga
     4441 agcgtggaag gaattcggga aggagttcgc ggagctatcc tcgccggagg gggtgccacc
     4501 cggttcggcg gcaagcccaa gggtctggag ctggtcggag gcgaacgaat actcgatcgc
     4561 ctgacccgga ctctcgaggc cgccctggga gagccaccgc tcctggtcgc caatgcgccg
     4621 ggtgcctccg agtggcggcc cgacctccgc accgtgagcg acgttcgtcc cggcttcgga
     4681 gcgctcggcg gcatctacac cgcagtcgtc gaagcgccgg cacccgtggt atgcgtcgcg
     4741 tgggacatgc cgttcgtttc cgaatcgctg atccgggcat tggccgatgg tctgaaaagc
     4801 gcggatgccg tcctgcccca gagcgacggg cggcgcggcg tcgagccact ctgcgccgca
     4861 tacggttcgg cctgtcggga agcgatcgcc gcgagcctgg ctgaagacga tctccgcgcc
     4921 atcggcttcc accgacgaat ccgtgtcggt atcctcccac tggatcaggt acgggcacta
     4981 gcggaccccg acctcctctt cttcaacgtg aacaccgcgg acgacctcgc gagagcggac
     5041 cagctgtggc gtcgacgcgc atcgtctcca taataggccg gaagaacgcc ggaaagacca
     5101 cgctcaccgt ggcattggcc agcgagctgg tgcggcgggg gcaccgcgtg atgacgatca
     5161 agcatgggca tcatcccgcc gatgccgacc gcaagggcag cgacacgtgg cgccattttc
     5221 atgaaggacg ggccgagcgg gtgctgatcg cctcgcccga tctccgggtg ctattcgagc
     5281 ggagccccga tgactacgat cccatcgccc tcgcacagca atacatgcag ggcgcggaca
     5341 ttgtactgac cgagggatat aaggcggctc ccctccctaa gatcgaggtc ttccgcaagg
     5401 cagtccccga ccctccgatc tacaatgcgg cctcggccga ggccgagcag tggatcgcgg
     5461 ttgtgactga cgacagagcc ttccgggccg agtgcaccgt gctccacttc gacgacacgt
     5521 tctggctcca gctgctggcc aatctggcgt gggaacgatc gctgaccctc gacccgtgaa
     5581 cgccccactc ggggctgccg acgccgccat caggatcctg acggaggtcc ggccccagcc
     5641 cgctctcagg ataccgctgg acgacgcgct cgactgcgtc ctggccgagg acatcgtgag
     5701 caggctcgac atccccgcct ggactaattc ggcgatggac ggttatgccg cccgcggtga
     5761 ggacgtgcgg ggagcgaccg aagatcgccc ggtgccactt cgcgtcgtcg agcagctgcc
     5821 ggcgggccgc tttcccgaga aggtgatcgg gccgggtgag tgtgccagga tctttaccgg
     5881 cgcgccgctt ccccaggggg ctgatagtgt catccggcag gaggacacga acctgggtgc
     5941 caccacggta ttggtcctca aggaccggga cgccggcgtc aacatccgcc gggccggcga
     6001 ggacatcagg aatgggacca ccgtgctcac cgccggcacc gaactaggac ccgcgcagct
     6061 gggggtgctc gcgtcgctcg cggtggcgca cccgttggtg taccggcggc cccgggtggc
     6121 cattctgggt agcggcgacg agatcgtgga catcgaccag ccggaggaga tcctcagcgg
     6181 ccggaagatc gcgagcagca acacccacac gctggtcgcc ctggtacggc gggccggcgg
     6241 cgagccggtg aacctcggca tcgccggcga cacacccgaa gacctgcgcg cacacctcac
     6301 ccgcgcgctc gactgcgatc tgctggtgac gaccgcgggc atcagcgttg gcgagcacga
     6361 ttttgtgcgt tcggtcctgg aggaactggg cggagaactc cggttctgga agctgcgcat
     6421 gcgccccggc gcaccggtcg gattcgggct tctggggcgc atgccctgga tcggtttacc
     6481 ggggaacccg gtgagcacga tggtcacctt cgagctcttc gtacgaccag ccattcggcg
     6541 gatgatgggt catcggctgc cctttcgccg tactgtggcc gtccgggtga ccgagccgat
     6601 cagcctcaag cccaagctcc agcacttcct tcgcggggtg gtgagccacg gcgcgggcgg
     6661 accagaggcg cggctcaccg gcccgcaggg atccggtatc ctcacctcca tgaccctggc
     6721 caatgccttg ctgatcattc ccgaggggca gttcgagacg ccggccggcg cgacggtcca
     6781 ggcactgatc ctggacgatc cggtgcacca ggaggagcca ggcttctgaa agaaagtgtc
     6841 tagggtcgag ggtctctcta gactctagaa cttctactgc aagcccatta ccttttgagc
     6901 ttcaagaagg ggagtagctt atccgccgca aggcggacgg atggatcgtc aagactgttc
     6961 gccaagtgcg ggcacggtcc attcgggagg cagtagcgag cggcgccagc cgctcctgca
     7021 ccttagagcg agaccttcgt ccacgcgaaa gcgcagcgga cggggtctcg ctttttttgt
     7081 tgctccagag ggggaaacta tgaacaacgt caagaccttc gtactcatgg ccggactgct
     7141 gggcctgttt gtgttggtgg gccagctgat cggcggctcc agcgggctgg ttgcggcgct
     7201 cgtgatcggg agcctcttca acttcatcat gtacttcttc tccgaccggc tggtcctccg
     7261 gatgtatggc gcgcacgtcg tcaccgccca ggaggccccg gagctgtacg ccatggtcga
     7321 ccgtctgcgg cagcgggccg gccttccgat gcccagggtt gccgtcgcgc cgcacgagca
     7381 gccgaacgcg ttcgccaccg ggcgaagccc ggagcacgcg gtggtggcgg tgaccacggg
     7441 catcctcaag tacgtgcccc aggaggagct cgagggcgtg atcgcgcacg agctggccca
     7501 catcaagaa
//
LOCUS       DASYRV010000441         3547 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2380603, whole genome shotgun sequence.
ACCESSION   DASYRV010000441 DASYRV010000000
VERSION     DASYRV010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3547
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2380603"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..682
                     /locus_tag="VGQ24_11850"
     CDS             <1..682
                     /locus_tag="VGQ24_11850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455582.1"
                     /translation="FLLQWPSLPVTSSAPYTTVTHWWGSTFEFQGRTINEEKHVSFLE
                     YKDLPSRTPVRLELAVCLAEHYEHWRTRLESLGWKIREAWEVSATPDQYRAYIQRSRG
                     EFSCAKPVCMTLANAWISDRTICYLASGKPAVVQHTGESRFLPDAEGLFRFRNLDEAA
                     RALSAVESDYERHSRLARELAEEFDARRVVARVLERALAAKRADRPKRAEGKDWTEEA
                     AGARGTRS"
     gene            679..1392
                     /locus_tag="VGQ24_11855"
     CDS             679..1392
                     /locus_tag="VGQ24_11855"
                     /inference="COORDINATES: protein motif:HMM:NF016668.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChbG/HpnK family deacetylase"
                     /protein_id="HEV8455583.1"
                     /translation="MKWLIITGDDFGMSPGINLGIVEAHHCGILTSTSLLVNRPASEA
                     AAALARECPVLSLGLHLELDAVAPERVHAELERQVARFVELVGALPTHLDSHHNVHHD
                     PRVLPQVLAWARRSAVPVRGYSEIRHVSKFYGQWGGDTHLELIGVEGLLRLLDEEVRD
                     GVTELACHPGYVAAGFRSSYAAEREVELRTLCDERVRQAIRQREIELIGFRDLPEPAK
                     AGVRHAEDRAPLWREVLGR"
     gene            1389..2282
                     /locus_tag="VGQ24_11860"
     CDS             1389..2282
                     /locus_tag="VGQ24_11860"
                     /inference="COORDINATES: protein motif:HMM:NF020032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455584.1"
                     /translation="MSKLRIAFLARSFSPQTTSYIPLVMQALTDAGAVVDHIHPLAGV
                     TDLSKVRIDHDLHVLHQMDGFALSLAGALHAQGAAIVNPYPATLALRDKIVMFRILQT
                     AGVRTPATYVTSHPDKLAPLLEAGPLIVKPYRGSDGQGIRIIRSAAELADVPHGKEGK
                     ERHGKEPVFAQRYHPPQGRDRKMFSIGGRIFGVKKVFPRRAEVDKHGEPFTPTPELCE
                     IVLRCGQAFGIDLYGVDIIESDGTPYVVDMNSIPGFKGVPDAPLRLARYLYAAAERAA
                     RGQPPFESAVPTEAVSTAGVR"
     gene            2279..3433
                     /locus_tag="VGQ24_11865"
     CDS             2279..3433
                     /locus_tag="VGQ24_11865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455585.1"
                     /translation="MSVTICLAPAQTIAYPHGGGHLWVYLQWALGLRALGLRVIWLEG
                     IAPRDPEHDPREMVSTLKSRLEPYGLAESLALFSLNGEPLPPDITEQALDLDAAAEAD
                     LLLNLWHSLSASVVRRFRLTAFVDTDPGLLQIWMTTGEIHMPPHDIYFTVGETVGTSA
                     ARFPDGGLTWHYTPPPVFLPEWPSAPAESGAPYTTLAHWWGGSVRFGGERFSNDKRAG
                     FLEYAQLPGHTPVTLELAICLRHVYEEWRARLEPLGWKLRDAWDVSTTPEQYRAYIQR
                     SRGEFSCAKPTYVKLATGWVSDRTACYLASGKPAVVQHTGPSRFLPDADGLFRFRNMD
                     EAVRALAQVESDYERHCRLARALAEEYFDARLVVGRVLEQVLAERVGHPA"
BASE COUNT          601 a         1175 c         1193 g          578 t
ORIGIN      
        1 cttcctgctc cagtggccgt ccctgccggt gacctcgagc gcgccgtaca ccaccgtcac
       61 ccactggtgg ggcagcacat tcgagttcca gggacggacc atcaacgagg agaagcacgt
      121 ctcgttcctg gaatacaaag acctgccgtc ccggacaccc gtaaggctcg agttggccgt
      181 ctgcctggcc gagcactacg aacactggcg gacccgtctg gaatccctcg ggtggaagat
      241 ccgcgaggcc tgggaggtga gcgcgacgcc ggatcagtac cgggcataca ttcagcggtc
      301 gaggggagag ttcagctgcg cgaagccggt gtgcatgacg ctcgcaaacg catggatcag
      361 cgaccggact atctgctacc tggccagcgg caagccggct gtcgtccagc acacgggcga
      421 aagccgcttc ctgccggatg ccgagggact cttccggttc cggaacctgg atgaggctgc
      481 ccgggcattg tccgccgtgg agtcggacta cgagcgtcac tctcggctcg cgcgcgaact
      541 cgccgaggag ttcgacgccc gccgcgtcgt cgcccgggtc ttggagcggg ccctggctgc
      601 gaaacgtgcc gaccggccca agcgggcaga aggaaaagat tggacagagg aggcagcggg
      661 cgcaaggggg acacgctcgt gaagtggctc atcatcaccg gagacgactt cggcatgagc
      721 cctggcatca acctggggat cgtcgaggct caccattgcg ggatcctcac gagcacgagc
      781 ctccttgtga acaggccggc gagcgaggca gcggccgccc tcgcgcgaga atgtccggtc
      841 ctgagcctag ggctgcattt agagcttgac gcggtcgcgc ccgagcgagt ccacgccgaa
      901 ctcgagcggc aggtcgcgcg gttcgtggaa ctcgtcggcg ctcttcctac ccacctggac
      961 tcgcaccaca acgtgcacca cgacccgcgg gtgctccctc aggtgctcgc gtgggcccgg
     1021 cgcagcgcgg tgccagtgcg aggttattcc gagatccgcc atgtctcgaa gttctacggg
     1081 cagtggggtg gcgataccca cctcgagctg atcggggtcg aagggctcct tcgcctgctg
     1141 gacgaggagg tccgtgatgg cgtgaccgag ctggcctgcc atcccggcta tgtagcggcg
     1201 ggatttcgtt ccagctacgc ggcggaacgc gaggtggagc tgcggacgct ctgcgatgag
     1261 agggtgcgcc aggccatccg ccagcgggag attgagctca tcgggttccg ggacctaccg
     1321 gagccggcca aggccggcgt acgtcacgct gaagaccgcg cgccgctgtg gcgggaggtg
     1381 ttggggagat gagcaagttg cgaatagcat tcctggcgcg gtcattcagt ccgcagacca
     1441 cgagctacat accgctcgtc atgcaggcgc tcacagacgc gggggcggtc gtcgatcaca
     1501 tccacccgct ggcaggagtg accgacctgt ccaaagtgcg catcgaccac gatctgcacg
     1561 tcttgcatca gatggacggc ttcgccctca gcctcgccgg ggcgctgcac gcccagggcg
     1621 ccgcgattgt gaatccgtat ccggcaaccc tggcgttgcg cgacaagatc gttatgttca
     1681 ggattctgca gaccgcaggc gtgcgcaccc ccgccaccta cgtaacctcg caccccgaca
     1741 agctggctcc gctcctggag gcggggccgc tcatcgtgaa gccttaccga ggatcggacg
     1801 gccagggcat ccgcatcatc cgtagcgccg ctgaactcgc ggacgtgccg cacggcaaag
     1861 agggcaagga gaggcacggc aaggagcccg tgtttgccca gcgctaccac ccgccgcagg
     1921 gccgcgaccg gaagatgttc tcgatcggcg gccggatctt cggcgtgaag aaggtttttc
     1981 cgcggcgggc cgaagtggac aaacatggag agcctttcac gcccacgccg gagttgtgcg
     2041 agatcgtcct gcgctgcggc caggcgtttg gcatcgatct ctacggcgtg gacatcatcg
     2101 agagcgacgg gaccccgtac gtggttgaca tgaacagcat cccaggcttc aaaggcgttc
     2161 cggacgcgcc gctgcgtctg gccaggtacc tgtacgccgc tgcggagcgt gccgcacggg
     2221 gacagccgcc gttcgagtcg gctgttccga ctgaagcggt gtcaacggcg ggggtccgat
     2281 gagcgtcacg atctgcctcg ccccagcgca gacgatcgcc tacccccatg gcggtgggca
     2341 cctgtgggtg tatctccagt gggccctggg gctacgggcg ctgggcttac gggtgatctg
     2401 gctggaagga atcgcccccc gcgatcccga gcacgatccc cgggagatgg tgtcgacgct
     2461 gaagagccgc ttggagccct atggcttggc cgaatccctc gcgctcttct cgttgaacgg
     2521 cgaacccctg ccacccgaca tcaccgagca ggccctggac ctggacgcgg ccgccgaggc
     2581 cgacctcctg ctgaacctct ggcattccct gtccgcatcc gtggtgcgcc gcttccggct
     2641 gaccgcgttc gtcgacaccg acccggggct cctgcagatc tggatgacca ccggcgagat
     2701 ccacatgccg ccgcacgaca tctatttcac ggtgggagag acggtgggca catcggcggc
     2761 gcggttccca gacggcggcc tcacgtggca ttacacgccg ccgccagtgt tcctgcctga
     2821 atggccgtcg gccccggcgg agtccggcgc cccgtacacg accctggctc actggtgggg
     2881 cgggtccgtg cgcttcggcg gcgagcgttt cagcaacgac aaacgggccg ggttcctgga
     2941 gtacgcccag ctccctggtc acacccccgt caccctcgag ctcgcgatct gcctcagaca
     3001 tgtctacgag gagtggcggg cgcgcctgga gccgctgggc tggaagctcc gggatgcctg
     3061 ggatgtcagc acgacgcccg agcagtatcg cgcctacatc cagcgatcga gaggtgagtt
     3121 cagctgtgcc aagcccacct acgtcaaact ggcgaccggt tgggtcagcg accgcactgc
     3181 ctgctatctg gccagcggga agccggccgt ggtacagcac acgggtccca gccgcttttt
     3241 gcccgatgcc gacggcctct tccggttccg gaacatggac gaggcggtgc gcgcgctggc
     3301 ccaggtggag tccgactacg agcgccactg ccgtctggcg cgcgcgctgg ccgaagaata
     3361 cttcgatgcc cgtctcgtcg tggggcgtgt gctcgagcag gtcctggccg agcgcgtggg
     3421 ccatccagcg tagcgatatg aacccggcca tcgatcacac cacagagctt cgccacgcgc
     3481 tggaacgcag cggcgagccc ggtgctaccg agttgctcga agccctgcag gcgctcctgg
     3541 ggagcgc
//
LOCUS       DASYRV010000442         2376 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_593286, whole genome shotgun sequence.
ACCESSION   DASYRV010000442 DASYRV010000000
VERSION     DASYRV010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2376
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_593286"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..877)
                     /locus_tag="VGQ24_11870"
     CDS             complement(<1..877)
                     /locus_tag="VGQ24_11870"
                     /inference="COORDINATES: protein motif:HMM:NF025736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEV8455586.1"
                     /translation="MAVTTVNGERELLFRLRPVDWGVLAYAAIASVVALVRMRTIPGL
                     EWVILSNALVIPLVWLMNRPGMGRFGRGLAEVYPIILVIIFYGALDVLTGHGAVATHE
                     KAIQHWEAVIFGGQVSREWWQRYPSQFWSTLLHAVYASYYLIIAAGPLLFLWRGETGK
                     LRRVVTAVSATYGICFVIFLLYPVAGPNYEFPKPSAEFINNPAAHLVYALLQRGSSYG
                     AAFPSSHVAAALVAAYTTWMGSRKLGLILAVPSLLLVVAVVYCQMHYAMDSLAAVVLA
                     GGVVGVVVKREERREK"
     gene            complement(868..1824)
                     /locus_tag="VGQ24_11875"
     CDS             complement(868..1824)
                     /locus_tag="VGQ24_11875"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEV8455587.1"
                     /translation="MTGGTGFVGSHLIDALLGAGDTVTALVRSPQKAGGLAAQGVRIV
                     PGDLGDAAALREAARDQEVVYHCAGLVAARDEAGFLAINRDGTARVLAAAGEVSNARF
                     VLISSLAAAGPSPRDERRKGDEPPQPVTAYGRSKLAGEQVVRAGKLPWTIVRPPGVYG
                     PRDAEFLRVFKAVRLGWIPVFGDGEQQLSLVYAPDLAGALAALGRSPGGSGGIFYPCH
                     PEVITSAELGRAIGRAMGRAVRIIGLPRWVARATLGVTATAARLTGRTTLLTPDKANE
                     FFAPAWTADPAPLSATTGWHATHALDSGAMATAAWYRAAGWL"
     gene            complement(1833..>2376)
                     /locus_tag="VGQ24_11880"
     CDS             complement(1833..>2376)
                     /locus_tag="VGQ24_11880"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEV8455588.1"
                     /translation="KRMGLVVRPLNLRDFPAEVERIKELYNRCWEKNWGFIPMTDHEI
                     EHLARQFKPVVVPGLAPFLEKDGKPIGFALALPDLNVVFRTNRKGRLFPVVLKLLWAL
                     KTRKIRRLRILLLGILPEYRGKGLDAILYHWIWTTGNAYRIYWGEAGWILEDNAAMNA
                     GLLKMGFTVYKTYRMLDRPL"
BASE COUNT          417 a          831 c          747 g          381 t
ORIGIN      
        1 tcttctctct tctctcttct ctcttcacta ccaccccaac tactcctcct gccagtacta
       61 ctgcagccaa cgaatccatc gcgtaatgca tctggcagta cactaccgcg actaccaata
      121 gcaggcttgg caccgccagg atgagcccga gctttcggga gcccatccag gtcgtgtacg
      181 ccgccaccag cgcagcggcc acgtgagagg aaggaaacgc cgctccatag gagctgcccc
      241 gttgcagcag cgcgtacacc aggtgagccg cggggttgtt gatgaactcc gccgagggtt
      301 tggggaactc gtagttgggg cccgccaccg gatacagcag aaagatcacg aagcagatgc
      361 cgtaggtcgc ggagaccgca gtcacgaccc ggcggagctt gccggtttcg ccccgccaga
      421 gaaacagcag cgggcccgcg gcgatgatca gatagtagga tgcgtatacc gcgtgcagca
      481 gcgtgctcca gaactggctt ggataccgct gccaccattc ccggctcacc tggccaccga
      541 agatcaccgc ttcccagtgc tggatcgcct tttcatgggt ggccacggcg ccgtgtccgg
      601 tgagcacgtc cagggcgcca tagaagatga tcaccaggat gatcgggtag acctccgcca
      661 gcccccgccc gaaccgcccc atcccgggcc gattcatcag ccacacgagc gggatgacca
      721 gcgcgttcga gaggattacc cattcgagcc cggggatcgt acgcatgcga acgagcgcga
      781 ctacggacgc gatcgccgcg tacgccagca ccccccagtc gacgggcctc agccggaaaa
      841 gcagttcccg ttcaccgttt actgttgtca cagccatcca gcggcgcgat accaagcggc
      901 cgtcgccatg gcaccggagt cgagcgcatg ggtcgcatgc cagccggttg tagctgagag
      961 cggagcgggg tcggcggtcc aggccggcgc gaaaaactca ttggctttgt cgggagtgag
     1021 cagcgtggtg cgtcccgtga ggcgcgcggc ggtcgcggtc actccgaggg tagccctggc
     1081 cacccagcgt ggtaacccga tgatccgcac ggcgcgcccc atggcccgcc cgatcgcacg
     1141 gccgagttcg gcgctggtga ttacctccgg gtggcaggga tagaagatcc cgccgctgcc
     1201 ccccgggctg cgccccagcg ccgcgagtgc cccagccaga tcgggtgcgt acaccagcga
     1261 gagctgctgc tcgccgtcgc cgaagaccgg gatccatccc agccgcaccg ctttgaacac
     1321 ccggaggaac tcggcgtcgc gcgggccata gacccccggc ggccgcacga tggtccaggg
     1381 cagcttgcct gcccgcacca cctgctcccc cgcgagcttg ctccgcccgt aggcggtgac
     1441 cggttggggg ggctcgtcgc ccttgcgccg ctcatcccgt ggcgaaggcc cggccgcggc
     1501 cagcgaggag atcagcacga agcgcgcatt ggacacctcg ccggccgccg cgagcacgcg
     1561 cgccgttcca tcccggttga tcgcgagaaa cccggcctca tcgcgcgccg caaccagtcc
     1621 cgcacagtga tacaccacct cctggtcgcg cgccgcctct cgcaatgccg cggcgtcgcc
     1681 caggtcgccg gggacgatgc ggactccttg ggccgccagc ccccccgcct tttgaggtga
     1741 gcgcaccagc gcggtgaccg tgtcgccggc gccgagcagc gcatcgatga ggtggctgcc
     1801 cacgaagccg gtgccgccgg tcaccagcac cctcataagg gccggtcgag catccggtag
     1861 gtcttgtaga ccgtaaagcc catcttgagc agccccgcgt tcatcgccgc attgtcctcg
     1921 aggatccagc cggcttctcc ccagtagatc cggtaggcgt tgccggtggt ccagatccag
     1981 tgatagagaa tcgcgtcgag tcccttgccg cggtattcgg gcaggatgcc gagcaacagg
     2041 atgcggagcc gccggatctt ccgcgtcttg agcgcccaga gcagcttgag caccaccggg
     2101 aacagtcgtc ccttgcggtt cgtgcggaag accacgttga gatcgggcag cgccagcgcg
     2161 aacccgatcg gcttgccgtc cttttcaaga aacggggcca gccccggcac cacgaccggt
     2221 ttgaattgcc gggcgagatg ctcgatttcg tggtccgtca tggggatgaa gccccagttc
     2281 ttttcccagc acctgttata gagctccttg atgcgctcga cctccgcggg aaagtcccgc
     2341 aggttgagcg ggcgcacgac gagccccatg cgcttc
//
LOCUS       DASYRV010000443         3207 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1132784, whole genome shotgun sequence.
ACCESSION   DASYRV010000443 DASYRV010000000
VERSION     DASYRV010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3207
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1132784"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            117..1249
                     /locus_tag="VGQ24_11885"
                     /pseudo
     CDS             117..1249
                     /locus_tag="VGQ24_11885"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
     gene            1277..2506
                     /locus_tag="VGQ24_11890"
     CDS             1277..2506
                     /locus_tag="VGQ24_11890"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEV8455589.1"
                     /translation="MDPIEIRRRNFIPADKFPYTTATGLTYDSGNYPAALDKALSILD
                     YKAFRKDQAEARKHGRHLGVGVVSYIEICGLGPSQVAGAVGFGGGLYDSANVRVYPTG
                     VVRVYIGGKPHGQGEETTFAQIVAEEFGYPVENIEIVSGDTETTPQGWGTYGSRTTAV
                     CGSAVKVAAQRVKEKARKVAAHLLEASEQDVEWKDGKFSVRGSPDQSKTFAEAALMAN
                     LAWNMPAGMEPGLEATAFFDPTNFVYPFGSHLCTVEVDIETGQVQILRYVAVDDCGPP
                     INPMIVDGQVHGGVIQGIGEALQEMAVYDESGQLLTGTMMDYAVPRASQMPRIETAHT
                     VTPSPVNPLGVKGVGEAGTIASAACVVNAVCDALQPFGIRHIDKPLTPARVWAAIQAA
                     GQRGSGAAGRDGKGATV"
     gene            2503..>3207
                     /locus_tag="VGQ24_11895"
     CDS             2503..>3207
                     /locus_tag="VGQ24_11895"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HEV8455590.1"
                     /translation="MIPTSFDYVRAESLRDALKVLSEGDGSKVIAGGHSLLPIMKFRL
                     AQPRRLVDISRLEELKGITEKGRGARIGAGTTYRELLESELLRERFPIVSEATETIGD
                     LQVRNRGTIGGSLAHADPVSDMPAVMLALDATFNLRSKRGRRSVKAREFFKGAFTTAL
                     AEDELLTEIILPPLPTGAGMTYLSHDHPASGYAIVGAAVVVARKRKAVTHAVVALTGV
                     GGIAYLLRSADSLVGSN"
BASE COUNT          593 a         1021 c         1086 g          507 t
ORIGIN      
        1 cagcgaaggt catgcggcgc gccaacgcgt cctccctgcc agcccgctcc caaccagcac
       61 ctgtcggccc tgcccgtacc ggcgagcccg ccggcgccgc ggtctgagga ggccccatgg
      121 ccacaatctt cggatcgggc atcaagcggc gggaggatcc ccggctgatc accggcgcgg
      181 caacgtatac cgacgacctc aagctctccg gcctcaccta cgccgccttc ctccggagcc
      241 cctacgccca cgcccggatc acccggatcg acaccggcga ggccgagcgt gcgcccggcg
      301 tgctcgcggt gtataccggg gcggcggtga aggaccggct ggtgccggta ccctgcgcct
      361 ggaacgtgcc caactgcaat ctcaaagtcc ctccacaccc gctgctcgcg tacgacaagg
      421 tgcgttatgc gggcgacggc gtcgccatgg tggttgccga gtcacgagcg gctgcacgcg
      481 acgcgatcga tctgatcgag gtggattacg acccgctccc cggcggcgtg gatcccgaga
      541 agatggccca ggccggtgcc ccacagcttc atgaggaagt gccgaacaac gtggcattca
      601 cctgggtggt ggccggaggc gacgcggagc gggcattcaa cgaggccgag gtcaaggtca
      661 aggaacgtat cgtccagcag cgcctgctcc cgacagccat ggagtgccgc gcggctgtgg
      721 cgagctacaa caaggggacc ggccagctca cgctctgggt cactagtcag aaccccacat
      781 tcaccggttc ctctgttcgg tgatgttgaa gctcgcggag catcgggtcc gggtcatttc
      841 accagaggtg ggcggcggat tcggaagcaa gataccggcg taccccgacg aggttctggt
      901 gagccttgcg gccatggatc tcggccggcc ggtcaagtgg gcggaggacc gctcggagaa
      961 ctacaagatc accatccacg ggcgggacca catcgagtat gtcgagctct gcggcacccg
     1021 ggacggaaag atcaccggcc tgcgcaccag ggtctacgcc ggcctgggag ggtacgcgtc
     1081 tacggcggca cccggtatcc cgacgatcct ccatgggctg gtttattccg gtgcctacac
     1141 tattcccaac atccacggga cgatctatgg ggtctatacc gccggcacac cagtcgatgc
     1201 ttatcgcggt gcagggcggc cggaggcggc ctttctcatc gaacggctcg tggacatctt
     1261 cgcccgcgag atcgggatgg acccgatcga gattcgccgg aggaacttca tcccagccga
     1321 caagttcccc tacaccacgg caacgggtct cacttacgac tcaggaaatt atccggccgc
     1381 actggacaag gcgctgagta tcctggacta caaggccttc cggaaagatc aggccgaggc
     1441 ccggaagcac ggtcgccacc ttggcgtcgg ggtcgtgtct tacatcgaga tctgcggcct
     1501 gggccccagc caggtggccg gcgccgtggg attcggcgga gggctgtacg actccgccaa
     1561 cgtgcgggtg tatcccaccg gcgtggtccg ggtgtacatc ggaggaaagc cgcacgggca
     1621 gggcgaggag acgaccttcg cccagatcgt ggcggaggaa ttcggctacc cggtcgagaa
     1681 catcgagatc gtctccggcg acaccgagac gaccccgcag ggctggggta cctatggcag
     1741 ccggacgacc gccgtctgcg gatcggcggt gaaggtggca gcgcagcggg tgaaggagaa
     1801 ggccaggaag gtggccgcgc atctgctgga ggccagcgag caggatgtgg agtggaagga
     1861 cggcaagttc agcgtgcggg gctcgcccga ccagtcgaag acatttgccg aggcggcgct
     1921 catggccaac ctcgcgtgga acatgccggc tggtatggag cccggcctcg aagccacggc
     1981 attcttcgat cccaccaatt tcgtgtatcc cttcggatct cacctctgta cagtggaggt
     2041 ggatatcgaa accggtcagg ttcagatcct gcgatacgtc gcggtagacg actgtggccc
     2101 acccatcaac ccgatgatcg tagacggcca ggtccatgga ggggttatcc aggggatcgg
     2161 tgaggcgctc caggagatgg ccgtctacga cgaatcaggc cagcttctga ccggaaccat
     2221 gatggactac gcagtgccga gggcgagcca gatgcctcgc atcgagaccg cacacaccgt
     2281 cacgccgtcg ccggtcaacc cgctcggcgt gaagggagtg ggcgaggccg gtacgatcgc
     2341 gtcggcggcc tgcgtggtga acgcggtgtg tgacgcactc cagccgttcg gcatccgcca
     2401 catcgacaaa ccgctgacgc cggcccgagt gtgggctgcg atacaggcag cggggcagcg
     2461 gggcagcggg gcagcggggc gggatggaaa gggggccacc gtatgatccc gaccagcttc
     2521 gactacgtcc gagccgagtc cctgagagac gcgctcaagg tcctctccga aggggacggc
     2581 agtaaagtca tcgcgggggg tcacagcctc ctgccaatca tgaaattccg gctggctcag
     2641 ccacggcgcc tggtcgacat cagccggctg gaggagctga aggggattac tgagaagggc
     2701 cgtggagctc ggatcggcgc cgggaccacc taccgcgagc tgctcgaatc ggagctgctg
     2761 agggagcggt ttccgattgt ctccgaggcc accgagacca tcggcgatct ccaggtgcgt
     2821 aaccggggca ccatcggggg gagtctggcg catgcggatc cggtctccga catgccggcc
     2881 gtcatgctcg cgctcgatgc gacgttcaac ctgcgctcga agcgcggccg ccgttcggtc
     2941 aaggcccggg agttttttaa gggcgccttc accacagcgc tggcggaaga cgagctactc
     3001 acggagatca tcctcccgcc gttgcccacc ggtgcgggaa tgacctacct gagtcacgac
     3061 catcctgcat cgggatacgc catagtgggc gccgccgtgg tcgtcgcccg gaagcgcaag
     3121 gcggtcactc acgcggtagt cgcgctcacc ggtgtggggg ggatagcgta tttactccgg
     3181 agtgccgaca gcctggtcgg cagcaac
//
LOCUS       DASYRV010000444         1529 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2259073, whole genome shotgun sequence.
ACCESSION   DASYRV010000444 DASYRV010000000
VERSION     DASYRV010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2259073"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..609)
                     /locus_tag="VGQ24_11900"
     CDS             complement(<1..609)
                     /locus_tag="VGQ24_11900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455591.1"
                     /translation="MLHDDTATWLSLPRPTAPRWVLPAHPAAVARSGVAVYQPVTLRG
                     LLGWELARLAAAVGSFRLLGRPQGPPRPVLEALDGYLRPGETIAVAAGNASQRWVALI
                     LDHDGRATALGKIAAEEKGRRALEREAEALITLASDLPPPLFAPRLLARTSGLILLEA
                     VTWRVRLQPWRLPVEFAAALGRFFRARMFERDGELFGPLHGDL"
     gene            complement(651..1391)
                     /locus_tag="VGQ24_11905"
     CDS             complement(651..1391)
                     /locus_tag="VGQ24_11905"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HEV8455592.1"
                     /translation="MTFWFLIDPPTWGYQFTRRVLDIVVAAVGLLLSLPLLLLVSVVL
                     LATDGSVFFRQMRIGKDGRPFTILKFRTMSTVSDPYARKPTRNAPEITPIGRYLRKTG
                     LDELPQLWNVLTGSMSLVGPRPEMSFIVDEYDSLQRLRLNARPGVTGFWQISTVRMEP
                     IHHHIEYDLFYLANRGLLFDLWIMLRTPLVLLAGRSITLDPGMAARWERPRRRPAAAR
                     QTEPIRFSVGEVTAAAEPAAAEGGGPIR"
BASE COUNT          299 a          491 c          508 g          231 t
ORIGIN      
        1 aagatcgccg tgaagtggtc cgaacagctc gccgtcccgc tcgaacatcc tggctcggaa
       61 gaaccggccg agtgcggcgg cgaactcgac cggtagtcgc cacggctgga gccggacccg
      121 ccaagtgacg gcctcaagca ggatgaggcc gctggtgcga gccagcagcc ggggggcgaa
      181 cagcggaggg ggcaggtcgg aggccagggt gatgagcgct tccgcctccc gctcgagagc
      241 acgccgaccc ttctcctcgg ccgcgatctt gcccagagcg gtcgctcggc cgtcgtggtc
      301 caggatcagc gcgacccagc gctgcgatgc gttacctgcg gccaccgcaa tcgtctcacc
      361 tggccgcagg tatccgtcga gcgcttcgag caccggtcgt ggaggacctt ggggtcgacc
      421 gagcagccgg aagctgccga cggccgccgc caagcgagcg agttcccaac caagcagccc
      481 gcgcagcgtc acgggctggt acacggcgac cccgcttcgc gcaaccgcgg cagggtgggc
      541 cggaaggacc catcgcggag ccgtgggtcg cgggagggac agccaggtag cagtgtcgtc
      601 gtgcagcaca gcggcgtcgt tcctaggtac cgtggtacag gatcattgcc tcagcggatc
      661 ggacccccac cctcggcggc tgcaggttcc gctgccgctg tgacctcccc gacgctgaag
      721 cggatcggct ctgtctgccg cgcggccgcc ggccgccggc gtgggcgctc ccagcgcgcc
      781 gccatcccgg gatccaaggt gatcgatcgg ccggccagca gcacgagcgg cgtccgaagc
      841 atgatccaga ggtcgaagag gagcccccgg ttggcgaggt agaagaggtc gtactcgatg
      901 tgatggtgaa tcggttccat ccgcaccgtg gagatctgcc agaagccggt gaccccaggc
      961 cgcgcattca gacgcaaccg ttgaagcgag tcgtactcgt cgacgatgaa cgacatctcc
     1021 ggacgcgggc ccaccagcga catgctgccg gtcagaacat tccagagttg cggcagctcg
     1081 tccagcccgg tcttgcgcag gtagcgaccg atcggcgtga tctccggagc attccgcgtg
     1141 ggcttgcgcg cgtagggatc gctcaccgtg gacatggtcc ggaatttgag aatggtgaag
     1201 ggccgaccgt cctttccgat ccgcatctgg cggaagaata ccgagccatc ggttgcgagg
     1261 aggacgaccg agaccaagag gagcagcggc aaggacagaa gcagtccgac ggccgccaca
     1321 acgatatcga ggactcgcct ggtgaactgg taaccccaag tgggaggatc aatcaagaac
     1381 caaaacgtca ctgatatatc ctccattgat gcattattcg atgcagcaat tcctgtgtgg
     1441 cgatgagcca tctaggaagg gtacacatgc gaaaaaacca ccctcccagg gcacagatat
     1501 tgccctccga gacttgcctc acttggacc
//
LOCUS       DASYRV010000445        10540 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_596303, whole genome shotgun sequence.
ACCESSION   DASYRV010000445 DASYRV010000000
VERSION     DASYRV010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10540
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_596303"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..819
                     /locus_tag="VGQ24_11910"
     CDS             <1..819
                     /locus_tag="VGQ24_11910"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HEV8455593.1"
                     /translation="GNALRVLVTEGGTPSSGVTVSWSTSATGGSVDPTSAPTDADGIA
                     STTWTLGTVSGTQSAQATLGGATGSPVAFSATAAPGAAMTLSKAGGDNQTGELNTALT
                     APLQAKAADQFGNGVAGVNVNWSAVGGDVSSGTVATDVSGISAVGVTLGGTAGPVTII
                     ATAGSLAGSPLTFNATATNAPPPTTTISVVNNAFSPASLTVGAGATVTWSWAPTAQDH
                     NVVPDGTVPTTSGNFADGPHTYQFKFDNPGTYRYYCANHGGPGGFGMSGVIIVQ"
     gene            858..1829
                     /locus_tag="VGQ24_11915"
     CDS             858..1829
                     /locus_tag="VGQ24_11915"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEV8455594.1"
                     /translation="MHVRPLLAAVGVVLGGCGGDGGSGPSPTTVIAKTSGDAQDGTVG
                     QALAKPIQGLVTESNAPLAGARVTWTTTLTEGTLTPSSGPTDANGLASTEWTLGPFKG
                     LHTVTATVDGATTASVNFTATAAPDAPMALTKVTGDNQTGMVNTTLAHVQVRVEDQFQ
                     NAIAGVGVSWSVSGGAVSPEMDVSDPAGISSVLVTLGGTAGTVTITATADGLTSSPVT
                     FNATAQPTPTEAAVHVGNNFFTSDRNNSTNPAVDTIAVGGVVTWTWRNTGPISHNVQS
                     LGSPSFTSSAIKTGNGQTHTVTFSAPGTFQYECAVHGAQMTGRTVVR"
     gene            complement(1847..3517)
                     /gene="glpD"
                     /locus_tag="VGQ24_11920"
     CDS             complement(1847..3517)
                     /gene="glpD"
                     /locus_tag="VGQ24_11920"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004368 - glycerol-3-phosphate
                     dehydrogenase (quinone) activity [Evidence IEA];
                     GO_process: GO:0006072 - glycerol-3-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HEV8455595.1"
                     /translation="MSLPEKPGTGSAQGKRSLERATLEQLSAHPADLLVIGGGINGAG
                     IARDAAMRGLRTILVEQNDLGSGTSSRSSRLIHGGLRYLEQGEFGLVLEANRERRTLL
                     RIAPHLVWPLPFVFPIHRGDRISRWRLAAGMLLYDTLALFRNVQTHRMLGKRAILEAE
                     PMLRDRGLLGGARYYDAQCDDARLVIATARSAIHHGALVANYMSVRSLERTAGRVVGA
                     QLEDGLTGEHGVVRASVVVNATGPWADRLRRLEDSGAALLVQPTKGVHIVVDRSRLDN
                     RQAIAFTSPIDGRVMFVLPWGDLSYIGTTDTDTVEPPDDLKVTADDVVYLLRSVNSRF
                     PSARLSMEDVRASWAGLRPLIVDRDRRSASSRPREHLIVQGSGGMLTVVGGKLTTYRS
                     MAAEVVDQAMRELRHRDGRRRHAEARTDEEPLPGGEAADLSQFRERGLELGIPAPSVD
                     HLLRHYGTEAAGIFNLGGADRGLLRRLLPPHPAIEAEVVHAVRRELAQTVEDVLVRRF
                     HLFYEHSDHGALAAQRVAELMGEELGWDQARVADEAECYRAFVLKSSA"
     gene            3431..4006
                     /locus_tag="VGQ24_11925"
     CDS             3431..4006
                     /locus_tag="VGQ24_11925"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEV8455596.1"
                     /translation="MGAELFQGRALERPLPLSRPSTWFLWQAHWIRPGARVLDVACGE
                     GRHSLAAAALGAAAVGVDRDVTRLVLARERAAAAGLSIDWRELDLEGAWPDLGSFDAV
                     LVFNYLDRASMPRILRLVSPGGLLIMETFLETQRDAGWGPTSEKHLLRPGELARLVVP
                     LKVVHGREALETVDSNRWRAVASIVARNSKR"
     gene            4016..5308
                     /locus_tag="VGQ24_11930"
     CDS             4016..5308
                     /locus_tag="VGQ24_11930"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HEV8455597.1"
                     /translation="MHDSRPGRRVAVIAGVRTPFAKSGTVFRDTSSVALARYAARELL
                     YRSEVDGREIDEVVFSQVVPSVLTPNVAREVSLLPQLPPSVPAYTLNRACASAAQAIN
                     NAADQITLGHADVVLAGGVESLSDLPILHSRRFSRVLVDASKARSFGARVATLGRVRP
                     KDLIPVTPAIAEPSTGETMGQSAEKMAKENGISREEQDRVALMSHQRAAAATADGRLT
                     AEIAPWFGSDTSQVITSDNGIRSDASLEALASLPPVFDRKYGTVTAGNSSPLTDGAAA
                     VLLMSEEKAKSLGHEPLVYIRSYAVAAVDPGWQLLMGPVYAVPKALERAEIPWNELGL
                     VEIHEAFAAQVLSNVQAWGSQAWADRLGLTAPVGEVDWDRTNVSGGSIAIGHPFAATG
                     ARLVTTLAHEMRRRDVQFGLISICAQGGMGYAMVLERR"
     gene            5415..7538
                     /gene="fadJ"
                     /locus_tag="VGQ24_11935"
     CDS             5415..7538
                     /gene="fadJ"
                     /locus_tag="VGQ24_11935"
                     /EC_number="1.1.1.35"
                     /EC_number="4.2.1.17"
                     /EC_number="5.1.2.3"
                     /inference="COORDINATES: protein motif:HMM:NF008363.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003857 - 3-hydroxyacyl-CoA dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0008692 - 3-hydroxybutyryl-CoA epimerase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006635 - fatty acid beta-oxidation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid oxidation complex subunit alpha FadJ"
                     /protein_id="HEV8455598.1"
                     /translation="MPAFTTQHENGIAVLTLDLPGEPVNKLTSAVRLELEALLNQLRD
                     DAAVRAVVLISGKADTFIAGADIEEFTALTTQAQAERLSFEGQETVSRVETFQKPIVA
                     AIHGACLGGGLELALACHYRIATDHPKTQLGLPEVQLGLIPGAGGCQRLPRLIGARAA
                     LDMILTGKSERASKALRLGLVDEVVPRSILRQVAVAAADRLARGGLPRRAAGGGMAAL
                     VLDRTSAGRRLVYRESRKQILKKTSGHYPAPLAALEAVSVGLEQGVAAGLAEEHRAFG
                     ELAIGEVSRKLVQIFFATTALKKDDGVPGKPTPRQIRRLGIVGSGFMGSGIAGTAVLN
                     VEIDTRLKDADLDRVGKGLKAANALLAERLERRRLTRPQYDRLSGLLSGSADYRGFSR
                     ADLVIEAVFEDLETKRRVLAEVEEQVRPETIFATNTSTIPIRQIASHARRPERILGMH
                     FFSPVEKMPLLEVIPTMATSPDTIITAVRFGRRMGKTVIVVADRPGFWVNRILSPYLN
                     ETGHLLQEGVPIGLIDRVMTDFGFPVGPVALLDEVGLDVAEKAGVVMYEAFGERMKPA
                     GSLGRMLGATRLGRKNGQGFYKYTRGHKAGVDNSVYPLLGVRPGDAEPELVERRLVYS
                     MLNEAAMACAENVVRSPRDGDVGAIFGIGFPAFRGGPLRMIDDLGPGRVVETLYHLQE
                     QFGERFRPAASLLEMARGSRRYYPA"
     gene            7565..8395
                     /locus_tag="VGQ24_11940"
     CDS             7565..8395
                     /locus_tag="VGQ24_11940"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEV8455599.1"
                     /translation="MSWTILAAAVLIYAGILMLLRVYESRLIYFPGSERTLVAPPPSL
                     GLPIQRVEITTEDAVNLVAWIIPAEPPSSLWLLVCHGNAGNLSEFDRPVHYAGLRELG
                     LNLLAFDYRGYGESGGAPSEAGLYRDADAAYRYLTDQRGVPASRIVVFGHSLGSAVAV
                     DLASRVPTAGLIVEGAFTSATDRGQELYPYIPVRWVAKSRFNSVDRISRATVPKLFLH
                     AQGDEVIPLAHGRRLYQAAPPPKTFVELRGGHGDAFDVDSANYFGSIQRFLAALSSGE
                     "
     gene            9082..>10540
                     /locus_tag="VGQ24_11945"
     CDS             9082..>10540
                     /locus_tag="VGQ24_11945"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEV8455600.1"
                     /translation="MPERLRAAVADRYRIEEEIGRGGMASVYLAEDLKHGRKVALKVL
                     FPGGNAEGYEPQRFLREIRIAARLSHPQILPVHDSGECDGLLYFVMPYAGCESLRDRL
                     SREGSLPIDAALRIARAVAAALGYAHRHGVIHRDIKPENILLQEGEPVVADFGVATAI
                     SAAGGDNIYITDRGFAVGTPAYMSPEQASAERDLDGRSDLYSLACVLFEMLSGQPPFA
                     GTSPRATMARHAIESPPSIRSLRPTVPLAVDLALERALAKDPAARFATMADFCDALVT
                     PVPTPVPVPGGQESRAIAVLPFVNASPDPDNEYFSDGMTDELITALTKVEGLHVASRT
                     SVFALKNQREDVRAIGARLNVSAVLEGSVRKAGNRLRISVQLSSAGDGRTLWSERYDR
                     EMADVFAIQDEIAQTIVRTLRTTLLGDIGDTTPVRYTENVKAYGLYLKGRFWWNRRTQ
                     ADIAEGVRYFEQAIAEDPEYALAYSGLADSYALDLD"
BASE COUNT         1842 a         3456 c         3462 g         1780 t
ORIGIN      
        1 ggaaacgccc tacgagtgct ggtgacggag ggggggacgc cgtcgtcagg cgtaacggtc
       61 tcctggtcca catccgccac cggcgggtcc gtcgatccaa cctcagcccc caccgacgcc
      121 gatggaatcg ccagcacgac ctggaccttg ggtacagtct ccggcaccca atccgcccag
      181 gcgacgctcg gcggtgcaac cggctcaccg gtggcgttct ctgcgaccgc cgcgcccggc
      241 gcggccatga ctctgagcaa agccggcggg gataatcaga cgggtgagct taacaccgct
      301 ctcacggctc cactgcaggc caaggcggcg gatcagttcg ggaacggagt ggcaggtgtg
      361 aacgtgaatt ggtctgccgt gggaggggac gtttcatcgg gcacagtggc gaccgatgtt
      421 tcggggatct cagctgtcgg ggtgaccctc ggcggcaccg cgggtcccgt caccataata
      481 gccaccgctg gtagcctggc cggctcaccg ctgacgttca acgcgaccgc tacgaatgcg
      541 cccccaccaa caaccacgat cagcgtcgtc aacaacgcat tcagcccggc atccctgacc
      601 gtcggcgccg gggcgacggt gacctggtcc tgggccccaa cggcacagga ccacaacgtt
      661 gtgccggacg gcacagtgcc gacgaccagc gggaattttg cggatgggcc ccacacgtac
      721 cagttcaagt tcgacaatcc tggaacctac cgatactact gcgcgaatca cggcggacca
      781 ggtggattcg gcatgtccgg ggtcatcata gtccagtaat caactgcgag acgagaggag
      841 caagagagtc atcccttatg catgtgagac cgctcctggc cgcggtcggc gtcgtactcg
      901 gcggatgtgg tggcgatggt ggcagtggcc cctcacccac aacggtcatc gcgaagacct
      961 cgggcgacgc tcaggacggt acggtaggcc aggcactggc caagccgatt caggggctcg
     1021 tgaccgagag caacgcgccc ttggcaggag cgagagttac ctggacgacg accctcaccg
     1081 aaggaaccct caccccgtcc tcggggccga ctgatgccaa cggtcttgcc tcgaccgaat
     1141 ggactctcgg accctttaag ggcctgcaca cggtaacggc gacggtagac ggcgccacaa
     1201 ccgcatcggt gaattttacg gctacggcag cgcccgatgc accgatggcg ctgaccaaag
     1261 tcactggaga caatcagacc gggatggtca acaccacgct cgcgcacgtg caggtgagag
     1321 tggaggatca atttcagaac gcgattgcgg gggtcggggt atcctggagt gtgtccggcg
     1381 gggcagtttc accggagatg gatgttagcg atcccgccgg gatctcgtct gtcctggtca
     1441 ccctcggtgg caccgccggc acggtaacga tcacagccac cgcagatggt ctgaccagct
     1501 ctccagtgac gttcaatgcc accgcacagc cgaccccgac ggaggcggct gttcacgtgg
     1561 gcaataactt cttcaccagc gatcgaaaca acagcactaa cccggcggtg gatacgatcg
     1621 ccgtaggagg cgtagtcacc tggacctggc gaaacaccgg tccgatctcc cacaacgttc
     1681 aatccctggg ctcaccgagc ttcaccagta gcgcaatcaa gaccggcaac ggccagacgc
     1741 acacggtcac gttctcagcg ccgggtacct tccaatacga gtgcgccgtc cacggggcgc
     1801 agatgaccgg tcggacggtc gtgcgatagc ccggccgcgt caggtgtcaa gctgatgact
     1861 tcaagacaaa cgcccggtag cactccgctt cgtccgccac cctcgcctgg tcccatccca
     1921 gctcttcgcc catcagctcg gccacgcgtt gagcggccaa cgcgccatga tccgaatgct
     1981 cgtagaaaag atggaagcgc cgcaccagca cgtcctccac tgtttgtgcc agctcacggc
     2041 gcacggcatg caccacttcg gcttcgatgg caggatgagg gggaagcagc cggcggagca
     2101 gtccccggtc ggcgcctccc aggttgaaga tgcccgccgc ctcggtgcca tagtgccgga
     2161 gcagatgatc cacgctcgga gcgggtatcc ccaattcgag cccccgctcc cgaaactgac
     2221 tcagatcggc cgcctctccg cccggaagtg gctcttcgtc agtacgcgct tccgcatggc
     2281 gacgacggcc gtcccggtgg cggagctctc gcatggcctg atccaccacc tcggctgcca
     2341 tcgaacggta ggtcgtcagc ttcccgccga ccacggtcag catcccgcct gagccttgca
     2401 cgatgaggtg ctcccgaggt ctgctcgatg cagagcgacg gtctcggtcg acgatgagtg
     2461 ggcgaagtcc cgcccagctg gcgcggacat cctccatgct gagacgcgcg ctggggaacc
     2521 gagagttgac cgaacgaagg aggtagacga catcgtcagc cgtgaccttg agatcatcgg
     2581 gaggctcgac ggtatcggta tcggtggttc cgatgtagga gaggtcaccc cagggcagga
     2641 cgaacatgac ccgcccatcg atcgggctgg tgaacgcgat tgcctggcgg ttatcgagac
     2701 gggagcggtc caccacaatg tggacgccct tggtgggctg gaccagcagc gccgcaccgg
     2761 agtcctccag ccgccgaagc cggtcggccc agggcccggt ggcgttcacg accacgctgg
     2821 cccggaccac accgtgctcc ccggtgagcc catcttccag ttgggccccc actacccggc
     2881 cggccgtgcg ttcgagcgac cggaccgaca tgtagttggc gaccagcgcc ccgtgatgga
     2941 tggcggagcg ggccgtcgcg atgacgagcc gcgcgtcgtc gcactgcgcg tcgtagtagc
     3001 gcgcgccccc gaggagcccg cgatcccgca gcatcggctc cgcttccaga atggcacgct
     3061 tgcccagcat ccggtgcgtc tgcacattgc ggaacaatgc cagcgtgtcg tagagcagca
     3121 tgcccgcggc aagccgccag cgcgagatcc ggtcgccccg gtgaatcgga aagacgaagg
     3181 ggagcggcca caccaggtgg ggggcaatcc gtagcagtgt tcggcgctcc cggttggctt
     3241 ccagcaccag tccgaactcc ccttgttcca gatagcgcaa tccgccgtgg atcagccggc
     3301 tcgaacgcga gctcgtgccc gatcccagat cgttctgctc caccagaatc gtgcgtaagc
     3361 ctcgcatcgc cgcgtcacgc gcgattcccg ctccgttgat gccgcctccg atgacgagca
     3421 gatcggctgg atgggcgctg agctgttcca gggtcgcgcg ctcgagagac cgcttccctt
     3481 gagccgaccc agtacctggt ttctctggca ggctcattgg atacgtcccg gcgctcgggt
     3541 gttggatgtc gcctgcggag agggacgcca cagtctggcg gccgcggccc tcggggccgc
     3601 tgcggtgggg gtcgatcgcg acgtgacacg gctggtgctg gcccgggagc gagcggccgc
     3661 ggcgggactc tcgatcgact ggcgcgagct ggatcttgag ggcgcgtggc cggacctggg
     3721 cagttttgat gcggttctgg tattcaatta tcttgaccga gccagcatgc cgcgaatcct
     3781 ccggctggtg tcgcccggcg gcctgctcat catggaaacg tttctggaga cgcagcgcga
     3841 cgcgggctgg ggcccaacgt cggagaagca tttactgcgc ccgggcgagc tggcccgcct
     3901 agtggtccca ctcaaggtcg tacacgggcg cgaagcgctc gagactgtcg actccaatcg
     3961 ttggcgagcg gtagcaagca tcgtcgctag aaacagtaag cggtaagagg accacatgca
     4021 cgactcacgc ccgggccggc gagttgcggt catcgccggt gtccggactc cgtttgccaa
     4081 gagcggcacc gtctttcggg acacgagctc tgtcgcgctc gcccgctatg ccgcccgaga
     4141 gctgctctat cgcagcgagg tggacgggcg ggagatcgac gaggtcgtat tcagtcaggt
     4201 cgtgccctcg gtcctcactc cgaatgtcgc gcgcgaggtg agcctcctgc ctcagctccc
     4261 gccgagcgtg cccgcgtaca ccctcaaccg ggcgtgtgcc tcggccgccc aggcgatcaa
     4321 caacgccgcc gatcagatca cgctggggca cgccgacgtg gtgcttgccg gtggggtgga
     4381 gtcactctcc gacctgccga tccttcattc ccgccgcttc agccgggtcc tggtcgacgc
     4441 cagcaaggca cgaagcttcg gagcccgagt cgcgacgctg gggagggtgc gccccaaaga
     4501 cctgattccg gtgacccccg ccatcgcgga gccctcgacc ggcgagacca tgggccaatc
     4561 ggccgagaaa atggccaagg agaacggcat cagtcgcgag gagcaagatc gggtggcgct
     4621 gatgagccat cagcgggcag cggcggcaac ggcggacggc cggctcacag ccgagatcgc
     4681 gccctggttt ggctctgaca ccagccaggt gatcaccagc gacaacggta tccgctccga
     4741 tgcgtccctt gaagcgctcg ccagcctgcc accggtattc gaccggaagt atggcacggt
     4801 gacggcggga aactcgtctc ccctgaccga cggcgccgca gccgtgctgc tcatgtcgga
     4861 ggagaaggcc aaatcgctgg gtcacgagcc gctggtttac atccgcagct acgccgtcgc
     4921 tgccgtggat cccggttggc agctgctcat gggcccggtg tacgccgtcc ccaaggcgct
     4981 ggagcgagcc gagatcccct ggaatgagct ggggctggtc gagatccacg aggcattcgc
     5041 cgcccaggtg ctctccaatg tgcaggcgtg gggatcgcag gcctgggccg atcggctcgg
     5101 gttgacggcc ccggtgggcg aggtggattg ggaccggacc aatgtctccg gtggctccat
     5161 cgcgatcggt catccgttcg ccgccaccgg cgcgcgcctg gtcaccacgc tcgcgcacga
     5221 gatgcgccgg agagacgtgc agttcgggct catctcgatc tgcgcccagg gcgggatggg
     5281 gtatgcgatg gtcttggaga ggagatagct gatgattcga gggtcacgag tcacgagtca
     5341 cgagtcacga gcgaggagtc gagcgttggc ccagctcgcg acccgcgact cgcgactcta
     5401 gactcccagc aactatgccc gccttcacga ctcaacacga aaacggcatc gccgtcctca
     5461 ccctcgacct gccgggcgag ccggtcaaca aactcacctc agcggtgcgg ctcgagctcg
     5521 aggccctgct gaatcagctg cgcgacgacg ccgcggttcg cgcggtcgtg ctgatctcgg
     5581 gcaaggctga caccttcatc gccggggcag acatcgagga gttcaccgct ctcacgaccc
     5641 aggcccaggc ggagcggctg agcttcgaag ggcaggagac ggtcagccgg gtggagacgt
     5701 tccaaaagcc gatcgtcgcg gccatacacg gcgcctgtct cggcggcggc ctggagctgg
     5761 cgctcgcctg tcactaccgg atcgctaccg accatcccaa gacccagctc ggccttcccg
     5821 aggtgcagct cgggctcatc cccggggcgg gcggctgcca gcggcttccc cgtctcatcg
     5881 gcgcgcgcgc ggccctggac atgatcctca cgggcaagag cgagcgcgcc tcgaaggccc
     5941 tccgcctcgg cctggtggac gaggtcgtcc cccgcagcat cctgcggcaa gtagccgtgg
     6001 cggcggcgga tcggctcgcc cgaggtgggc tgccccggcg agcagcagga ggcggcatgg
     6061 ccgcattggt gttggaccgc acctccgccg gacggaggct ggtctatcgc gagtcccgca
     6121 agcagatcct caagaaaacc agcggccact accccgctcc gctggcggcg ctcgaggcgg
     6181 tgagcgtggg attggagcag ggagttgccg ccggactggc cgaggagcac cgtgccttcg
     6241 gcgagctggc gatcggcgag gtgtcccgga agctggtcca gatcttcttc gccacgactg
     6301 ccctgaagaa agacgatgga gtgcccggga agccgacgcc tcgccagatc cggaggctgg
     6361 gtatcgtcgg ctcgggattc atgggttcgg ggatagcggg cacggccgtt ctcaacgtcg
     6421 agatcgacac ccggctcaag gatgccgacc tggaccgcgt cggaaaggga ctgaaggcag
     6481 ccaacgcact gctagccgaa cggctcgagc ggcggagact gactcggccc cagtacgatc
     6541 gtctgagcgg gttgctctcc gggtccgccg attatcgtgg gttcagccgg gccgacctgg
     6601 tgatcgaggc ggtgttcgag gatctggaga ccaaacgacg ggtgttggcg gaagtcgaag
     6661 agcaggttcg cccggagacg atcttcgcca ccaacacgtc cacgataccg atccgccaga
     6721 tcgcctctca cgcccgccgg cccgagcgaa tcctcggcat gcacttcttc tctcccgttg
     6781 agaagatgcc gttgctcgag gtcattccga ccatggcgac cagtcccgac acaatcatta
     6841 ccgccgtgcg gtttggtcgg cgcatgggca agacggtgat cgtcgtggca gaccgccccg
     6901 gcttctgggt caatcgcatt ctgtcaccct atctgaacga gaccggtcac ctgcttcagg
     6961 aaggtgtgcc gatcgggctg atcgaccgcg tgatgacgga ctttggtttc ccggtcggcc
     7021 cggtcgcgct tctggacgag gttgggttgg acgtcgcgga gaaagccgga gtcgtcatgt
     7081 acgaggcgtt tggggagcgg atgaagccgg cgggctccct cggccgcatg ctcggcgcca
     7141 cccgcctggg acggaagaac gggcagggct tctacaagta caccaggggc cacaaggccg
     7201 gagtcgacaa cagtgtgtac ccgctgctcg gggtgcggcc cggtgatgcc gagccggagc
     7261 tggtcgaacg gcgattggtc tattcgatgc tgaacgaggc ggcgatggcc tgtgccgaga
     7321 atgtcgtgcg aagccctcgc gatggcgacg tcggcgcgat cttcgggatc ggctttccgg
     7381 cctttcgcgg tggtcccctg cgaatgatcg acgatctcgg tccggggcgg gtcgttgaga
     7441 ccttgtatca cttgcaggaa cagttcggtg agcgattccg gccggccgcc tccctcctcg
     7501 aaatggcccg gggctcgcgg cgatattacc cagcttgagc ccggccgggc cctggatccg
     7561 acggatgagc tggaccattc tggcagcagc ggtcctgatc tacgccggta tcctcatgtt
     7621 attgcgggtg tatgaatcgc ggctgatcta ctttccgggt tcggaacgca ccctcgtcgc
     7681 cccacctccc tcgctcggcc tgcctattca gcgggtcgag atcaccaccg aagacgccgt
     7741 caacctcgtc gcctggatca ttccggcgga acccccttca tcgttgtggc tgctcgtctg
     7801 ccacggcaac gccggcaacc tctcggaatt cgaccgcccg gtgcattacg ccggcctgcg
     7861 cgagttgggc ctcaacctgc tggcgttcga ctacagaggt tacggcgaga gcggaggggc
     7921 gccgagcgag gcgggactct atcgtgacgc cgatgcggcc taccgctacc tgacggatca
     7981 acgtggcgtt ccggccagcc ggattgtcgt attcggtcat tcgctcggtt ccgccgtcgc
     8041 cgttgacctg gccagccggg ttcccaccgc cggcctgata gtggaaggcg ccttcacctc
     8101 ggccaccgac cgggggcagg agctctatcc ttatataccg gtccgctggg tggcaaagag
     8161 tcggttcaac tcggtcgata ggatctcccg cgcgacggtg ccgaaactct ttctccacgc
     8221 gcaaggggat gaagtgatcc cgctggcgca cggacggcgt ttgtaccagg cagcgccacc
     8281 gccgaaaacg ttcgtcgagc tgcgaggagg gcacggggat gccttcgacg tggactcggc
     8341 gaactacttc ggcagtatcc agcgatttct ggcggcgttg tcgagtggcg agtagatccc
     8401 tgagcggagc gtgcatagac acgttgccct gagacttgag cctttgatga gacgctgtgg
     8461 atcgcgatcc caccaccaag gttgaggacc gcgttgcgca gaacgtgggt tgagcgcgtc
     8521 tactggtggt ggatgctgcg taccagcaga gcggcagcgt acgaggcgca gctgcgcttc
     8581 acacgccagt tcgctgatgc agcggactgg atcgaatatc tggaacgtca cccctcggga
     8641 atctgaggtc cacgccgcgc tgccgctctg cttccgttca cctgtgagcc cttcgtaccc
     8701 ggtggtctcg gcactgcgcc tgaagccagc caagcctccc cgcgcagacg aaatgtgaat
     8761 gggccctccg gcaggctccg cgacaaccac tcctcccttc ccctgggagc ctgccgaagc
     8821 ctgtcccgag cttgcgaggg gaacccatcc ccatttcgtc tgctccgccc cgctgctcgc
     8881 ggccacagac gatgtgtgcg gcacccggat gagccgcgag ggctgagcgc aaggggtgag
     8941 gctgggggaa gtcggcgctt gaagccggag cggctcatcc gggtgccgct ggaccagacg
     9001 gagcttttca aacttgtgat tcgagcggcg aagggttccc ttccatagaa cccgaatcac
     9061 gagcgcatca ctctgcctgc cgtgcctgag cgcctgcgag ccgctgtggc ggaccgctac
     9121 cggatcgaag aagagatcgg tcgcggcggc atggcatcgg tctatctggc cgaggatctg
     9181 aagcacggtc gaaaggtggc gctcaaggta ctgttccccg gcggcaacgc cgaggggtac
     9241 gagccccagc gcttcctgcg cgagatccgc atcgccgccc ggctttccca tcctcaaatc
     9301 ctgccggtcc acgactccgg cgagtgtgac ggactgctgt acttcgtgat gccctatgcc
     9361 ggatgcgaga gcctgcggga ccgcctctca cgcgaagggt cgctgccgat cgatgccgcg
     9421 ctgaggatcg cgcgggcggt ggcggcggcg ctcggctatg cccaccgcca cggcgtgatt
     9481 catcgcgaca tcaagccgga aaacatcctg cttcaggaag gcgagccggt ggtggccgac
     9541 ttcggcgtcg ccacggcgat ctcggccgcg ggcggcgata acatctacat caccgaccgc
     9601 ggctttgcgg tcggcactcc cgcctacatg agcccggagc aggccagcgc ggaacgcgat
     9661 ctcgatggcc gaagcgatct ctacagcctc gcctgcgtgc tgttcgagat gttgagcggg
     9721 cagccgccct ttgcgggcac cagcccgcgc gccaccatgg ctcgacacgc catcgagtca
     9781 ccaccatcga ttcgctcgct ccgtcccacg gttccactgg ccgtggatct ggccctggaa
     9841 cgcgcgttgg ccaaggatcc ggccgcccgc tttgccacga tggcggattt ctgcgatgcc
     9901 ctggtgacac cggtgccaac cccggtgccg gtgcctgggg gacaggaaag tcgtgccatc
     9961 gcggttctac cgtttgtgaa cgccagccct gatcccgaca acgaatactt cagcgacggc
    10021 atgaccgatg agctgatcac cgccctcacc aaggtcgaag ggttgcatgt cgcctcgcgc
    10081 acctcggtgt tcgccctcaa gaaccagcgg gaggatgtgc gcgccatcgg ggcccggctc
    10141 aacgtgtcgg cggtgctcga aggctccgtc agaaaggcag gtaaccggct gcggatcagc
    10201 gtacagctga gtagtgcggg tgacggccgg acgctgtggt cggagcggta cgatcgcgag
    10261 atggcggacg tgttcgccat ccaggacgag attgcccaga cgatcgtgcg cacactccgc
    10321 acgacgcttc tgggcgatat cggcgacacg acgcccgtgc gctacaccga gaacgtcaag
    10381 gcctatggcc tctatctcaa gggccgattc tggtggaacc ggcgaaccca ggccgatatc
    10441 gccgaaggtg tccggtattt cgagcaggcg atcgcggaag atcccgagta cgccctggcg
    10501 tacagcggcc tagccgattc ctatgccctc gatctcgatt
//
LOCUS       DASYRV010000446         2711 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2382713, whole genome shotgun sequence.
ACCESSION   DASYRV010000446 DASYRV010000000
VERSION     DASYRV010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2711
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2382713"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            398..2566
                     /locus_tag="VGQ24_11950"
     CDS             398..2566
                     /locus_tag="VGQ24_11950"
                     /inference="COORDINATES: protein motif:HMM:NF017539.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NACHT domain-containing protein"
                     /protein_id="HEV8455601.1"
                     /translation="MKALRMLRARVRRTARQVRRSAANESGAVAAAVLGAIAAYAAVA
                     ASLPENPTAVQRRWAVVALIGGGITAFLTAKAGGYSLRRRREGDLLEAPSREAAVVLA
                     SPAKREQRRRAMLERVRSSWIRESLNRSLGAVAQMELGLRERPDAIRHPAELVHWQAG
                     QRQTIARGTPISRVFDDTGKALLILGDPGSGKTTLLLELTRELLDRARADPEHPIPVV
                     FNLSSWSVRQAPLSEWLKIELVEAYQIPRNIAEEWVDADQILPLLDGLDEVSSYHRDS
                     CVEAINGFRDDHGLLPIAVCSRTQNYETLVAKLRLMGAVEIQPLTRAQVSRYLRQAGT
                     PLAGVCAVLGDDETLWELLKSPLLLNIVVLAYQGKSADAVRAAGPPEERRARLLADYV
                     ERMLERRPEDPRFPRARTIHWLAWLASSLQAHEQKEFHVEWIQVDWLPTPGQRRLVTS
                     GLPIAAALLGGGIAAVVTRAIYHFADRAYGLSGRAAVLGLPAWIATGLGIGFAIGLIL
                     WDKTIRPAEPLRWTWAAARRNLRSRLSRGLLFGVIAGLVFWLAGGLPIESLVRVAFGI
                     VPASLALVLYLLLGGLEGTMLGGRTSPNEGMARARRNAVVGGLPFALPFGLLTAILYG
                     SQYGLANGLVTGAHTTLPIWVLAGLWAGGGAYLRHLAVRALLWRDGLASWNYVTFLDY
                     AAERVLLRKVGGGYIFAHGSLLDHFASANGKLVPVNFPSG"
BASE COUNT          469 a          844 c          911 g          487 t
ORIGIN      
        1 tggagctatc tgcgcggcag agctgcacgg gcgcggcaga gcaccacaac cggcgcggca
       61 aggcatcaca ccctgcgcgg caaggcctcg gaattcgcca acggtgtcag tcacatggga
      121 gcccggtcga aaaaggctcg gaataaagcc gcgcccggcc aagggtttcg ataacgaatg
      181 ccaagacata ccgcttgagc tgccgagccc aaacgagatc cgcggtcatg cagccttggc
      241 gattggcaga aacgagatga ttccgtcgtc tcaacgattt gaatggtttg gatggattgc
      301 tctaatctag actagccgag gtttgtgagg gaggtgcgcc acagctactc atggtcaacg
      361 atcaagcgac acttcggcgc cgtggccagg gcgaccgatg aaggccttgc ggatgctgcg
      421 tgcccgagtg cgccgaactg cccgccaggt ccggcggagc gccgcaaacg agtccggtgc
      481 ggtagcggcg gcggtcctgg gcgccatcgc cgcttatgcc gcagtcgccg cgagccttcc
      541 ggagaacccg actgccgtcc agcggcggtg ggccgtagtc gccctgatcg gaggcgggat
      601 caccgcgttc ttgacagcca aggcaggcgg ctactcgtta cggcgaagga gggagggcga
      661 ccttctcgaa gcgccgtccc gggaagcagc ggtcgttctg gcctcaccgg ccaagagaga
      721 acagcgccgc cgggccatgc tggagcgggt gcgtagctct tggatcaggg agagcctgaa
      781 ccgatcactt ggggccgtcg cccagatgga gctcggtctg agggagcgac ctgacgccat
      841 ccgccacccc gcggagctgg tgcactggca agccggccag aggcagacga tagcacgggg
      901 cactccaatc tccagagttt tcgacgacac cgggaaggcg cttctgattc tgggagatcc
      961 tggttcgggg aagactacgc tgctgctcga gctgacccgc gagctgctcg accgggccag
     1021 agccgacccc gagcacccga ttccggtcgt gttcaatttg tcctcgtggt cggtgcgaca
     1081 ggccccgctg agcgaatggc tgaagatcga attggttgag gcgtatcaga ttccaagaaa
     1141 catcgcggag gaatgggtcg acgccgatca gatcctgccg ctgctcgacg ggctcgacga
     1201 ggtctcctcc tatcatcgtg acagttgcgt cgaggcgatc aacggcttcc gggacgatca
     1261 tggcttgctg ccgatcgcgg tctgcagcag gacgcagaac tacgaaacgc tcgtagccaa
     1321 gctgcggctg atgggcgcgg tggagatcca gcctctcact cgggcgcagg tgagcagata
     1381 cctgcgtcag gccggcacac ccctggctgg ggtgtgcgcc gttctcggcg acgacgaaac
     1441 gctctgggag ctgctgaagt cgccgctatt gctgaacatc gtcgtcctcg cctatcaagg
     1501 gaagtccgcc gacgcggtgc gggccgccgg accgccggag gaacgtaggg cgcgattgct
     1561 ggccgactac gtcgagagaa tgctcgagcg tcgacctgaa gacccgcgct tcccacgggc
     1621 caggactatc cactggctcg cctggctggc gtcgtcgctg caggcgcatg agcagaagga
     1681 attccacgtc gagtggatcc aggtggactg gctgcccacg ccgggccagc gacggctcgt
     1741 cacatcgggt ctgccaatcg cggcagcact gctcggcgga ggcatcgccg ctgtggtaac
     1801 cagggcgatc taccacttcg cggaccgagc gtatggtctc tccggacgag cggccgtgct
     1861 cgggctcccc gcctggatcg ccactgggct cggaatcggc ttcgcgatcg gtctgatcct
     1921 ttgggacaag acgatccgcc ctgcggagcc attgcgctgg acatgggcgg cggcgcgaag
     1981 gaacctgaga agcaggctat cgcgaggcct gctcttcgga gttatcgctg gcctggtatt
     2041 ctggttggcg ggtggcttac ccattgagtc tctggttagg gtcgccttcg ggatagttcc
     2101 ggcttcgctc gcgctggtgc tgtacctgct cctgggtgga ctcgaaggca ctatgctcgg
     2161 cggacgcacc tcgccaaatg aaggcatggc gagagcacgg cgaaacgccg ttgtcggtgg
     2221 actgcccttc gcgctcccgt tcgggctcct gacggcaatt ctctatggct cccaatatgg
     2281 actggccaat ggcttggtga ccggagcgca cacgaccctg ccgatctggg tgctcgccgg
     2341 gttgtgggcg ggtggtggtg cctatctgcg ccacctcgcc gttcgtgccc tcctctggcg
     2401 cgatggcctc gcctcttgga actacgtcac cttcctcgac tacgcggccg agcgagtcct
     2461 gctacgcaag gtcggcggag ggtacatctt cgcccacggc tcattgttgg accacttcgc
     2521 ctccgcgaac ggaaagctcg tccctgtgaa ttttccatct ggatgagcgc ccagctctcc
     2581 tggtcttcca ccggggagct caggttcgtc ccagccgatt tgggagcacg cccgccgtca
     2641 tcccggacga cggcgggcgt gctgctccag ggcggcagcg ccggacggtt acgaggcggt
     2701 cgcggtcacg a
//
LOCUS       DASYRV010000447         3806 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2383092, whole genome shotgun sequence.
ACCESSION   DASYRV010000447 DASYRV010000000
VERSION     DASYRV010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3806
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2383092"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2461
                     /locus_tag="VGQ24_11955"
     CDS             <1..2461
                     /locus_tag="VGQ24_11955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455602.1"
                     /translation="LQAAQLSEPVVPGSKVALKPGPQYEAGWFRRFLFGKGWRQLWMT
                     EIEVPVAALDTLRGGLTAYDRGGGGQTLALRFCTPDGRIYQFRSVDKNPGQLAKGFRR
                     TPPIRWLYHNHISAMFPAGALAVGGLEEAAGLPTTERWLAVMPDSPRVGKWREDFKGM
                     LGTFERRHIPSEECFPEVHEAEVIASDTLLARIHADGVNWVDQNSYLTARLLDLLVND
                     PDRHAEQWSWIRSDRDGLHWWVPIPRDRDWALAHNDGLIYNVARRVFPVWIKFGPEYR
                     SIRGLTMKSESLDRLLLAGMDRRAWDTVAAHLRSRLSDETITAAVATLPAEFDDSTTG
                     YLAKSLMSRRDALPGAADRFYRGLAQVVDIHGSEGSELVEASRAPDGSLVLEMFAANR
                     TPVWRRRFVREETSEIRLYFRGGADSMRIRGHKDGIPLRVITGGGADLVADSTGGSAL
                     RVYDDSGSSTVQATGPVQRIMRPPEALPHRDWGHRISMAPWIGIRPELGAIVGAGPVF
                     YSYGFRKVPYQSRVALRLATTTKAGELNADFRADIRFERPDRRVLIKAAALNADVIRF
                     FGFGNETTRAPSSGFHNVIQQAYSLEPVVELGIGGPARFELGGLLRWSETDEQRVTLL
                     TVERPYGTGSFTEAGASAAFVIDSRDDEDLPTKGVTLELRGRVFPSILDVRSAFGTIG
                     LVGTSYHTARSMPMQPTLAFRIGAQRALGTPPFFEAPELGGWLNFRGLTTRRFIGDAS
                     LYANVDVRLNLGDLLDVGNWGVLGLGDVGRVFQDGESSTRWHYSLGGGVWTTVSSHVF
                     TATLASGGEKLRFYVKSGFHF"
     gene            complement(2493..>3806)
                     /locus_tag="VGQ24_11960"
     CDS             complement(2493..>3806)
                     /locus_tag="VGQ24_11960"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8455603.1"
                     /translation="IRREFVERVRTRAFIISTMLFPLLMAMFTVLPALLLRRASGTKR
                     IAVVEGVEGTFTARVADALASNRRRDSAAPLPFDVERLPAVGRVEAVRDSALARTGLS
                     KRAQAEAFDGVLVLTEETLQNGRIQYYGANVGSPAEMRRLEEILRPVVQRERLERLGV
                     DPGVVLQAIGRVDLVTQKVADGRLTGQSGAATFGLAYGMVFILYLALMIYGSQVMTSV
                     VEEKSSRIIEVLASSLRPFELMLGKVIGVGLVGLFQLSIWAATALYLGSFGASFMGRM
                     MDDGGAAAAATSSGGASFLSAVSPALVLIFLVLFILGFLFYAAMFAAVGAMSSTVQDT
                     QQLMMPVTLPIMLGIMTIFALVNDPNGTLGKVITFIPFWAPFALPVRYSITPLPIWEV
                     LSAIAVMILSVLGVAWVAGRVYRVGILSYGKRATFRDMVRWVRTA"
BASE COUNT          693 a         1235 c         1220 g          658 t
ORIGIN      
        1 gctgcaagct gcacaactca gcgaaccggt tgtgcctggc agcaaggtcg cgctgaagcc
       61 ggggcctcaa tacgaagcgg gatggtttcg ccgcttcctg ttcggcaagg gctggcggca
      121 actgtggatg acggagatcg aagtgccggt tgcggccctg gacacgcttc ggggagggct
      181 cacggcctat gatcgtgggg gcggaggcca aaccttggcg ctccgctttt gtacgcctga
      241 cggccgcatc tatcagtttc gttccgtcga caagaacccg ggccaattgg cgaaggggtt
      301 tcgccgtacc cctccaatcc gctggctcta tcacaatcac atcagtgcga tgttccccgc
      361 cggggcgctc gccgtgggag gattagagga ggccgccggc ttgccgacga ccgaacgctg
      421 gctggccgtc atgcccgact ccccgcgcgt gggcaaatgg cgggaggatt tcaaaggcat
      481 gctgggcacc ttcgagcgcc gtcacattcc cagcgaagag tgttttcccg aagtgcacga
      541 agcggaagtg atcgcatcgg acactctgct ggcgcggatt cacgcggatg gagtgaactg
      601 ggttgaccaa aacagctacc tgacagcgcg cctcctcgat ctcctcgtca acgatcccga
      661 ccggcacgcc gagcaatgga gctggatacg ctcagatcgt gatggcctgc actggtgggt
      721 cccgatcccg cgcgatcggg attgggccct cgcccacaac gatggcctca tctacaacgt
      781 ggccaggcgg gttttcccag tttggatcaa gttcggcccc gaataccgca gcattcgggg
      841 gctcacgatg aaatcggaat cactcgaccg actgctcctg gccggcatgg accgtcgggc
      901 gtgggacacg gtggcggcgc acctccgcag ccggttgagc gacgagacca tcactgcggc
      961 ggtcgctact cttccagctg agttcgacga ctcaacgact ggttatctag cgaagagcct
     1021 catgagccgg cgggatgccc tgccgggagc agcggaccgg ttctatcgcg ggctcgctca
     1081 ggtggtggat atccacggct cggagggctc ggagctcgtt gaggccagtc gggcacctga
     1141 tggctcgctg gtgctggaga tgttcgcggc caatcgcact ccggtgtggc ggcggcgatt
     1201 tgtgcgggag gagaccagcg agatccggtt gtacttccgg ggcggggccg acagcatgcg
     1261 gatccgcggt cacaaggacg ggatcccgct ccgagtgatc accggaggcg gcgccgacct
     1321 cgtggcggat tcgacggggg gcagtgctct ccgggtctac gacgattcgg gcagttcaac
     1381 ggtccaggca actggcccgg tgcaacgcat catgcgcccc ccggaggcac ttccccaccg
     1441 cgattgggga catcgtatca gtatggcgcc ctggatcggc atccgtccgg agcttggcgc
     1501 catcgttgga gcgggacccg tgttctacag ctacgggttc cgcaaagtac cctaccaatc
     1561 gcgggttgcc ctccgcttgg cgaccacgac caaggcgggt gagctcaacg ccgacttcag
     1621 ggccgacatc cgctttgagc ggcccgaccg gcgcgtgctc atcaaggcgg cggccttgaa
     1681 cgcggacgtg atccggttct tcggatttgg aaacgagacg acccgggctc ccagcagcgg
     1741 ctttcacaac gtgattcagc aggcctattc cctcgagccg gtggtcgagc ttgggattgg
     1801 cgggccggcg cgattcgagc tcggaggact gctgcgctgg tcggagacgg atgagcagcg
     1861 ggttactctg cttaccgtcg agcggcccta tggaaccgga tccttcaccg aagccggggc
     1921 cagcgcggcc ttcgtcatcg actcccggga cgatgaggat ctgcccacca agggggtgac
     1981 cctcgagctc aggggccggg tgttcccctc gatcctggac gtacgctcgg catttggaac
     2041 gattgggttg gtgggaacct cgtatcacac cgcgcgctcc atgccgatgc agcccaccct
     2101 cgcgtttcgg atcggcgccc agcgagccct cggcaccccg ccattcttcg aggcgcccga
     2161 gctcggcggc tggctgaact tccgcggtct caccacccgt cgcttcatcg gcgatgcctc
     2221 gctctatgcc aacgtcgatg tgcggctcaa tctcggcgac ttgctggatg tcggaaactg
     2281 gggagtgctc gggctgggcg acgtgggacg cgtcttccag gacggcgaga gctccacgcg
     2341 ctggcactac tcactgggtg gaggagtctg gacgaccgtc tcgagccatg tgtttacggc
     2401 gacgcttgcc agcggcggcg aaaagctccg cttctacgtc aagagcggct ttcacttctg
     2461 agtgccccca atgggaagct atccgcgccc cgtcaggcag tcctgaccca cctcaccatg
     2521 tcgcggaacg tagcgcgctt cccgtacgac agaattccca cccggtagac ccgtccggcc
     2581 acccaggcca cgcccaacac gctcagaatc atcaccgcga tggcggagag aacctcccaa
     2641 atcgggagcg gcgtgatcga ataacgcacc ggcaacgcaa agggtgccca gaagggaatg
     2701 aaggtgatca ctttgcccag cgtcccgttc ggatcgttga ccagcgcgaa aatggtcatg
     2761 atgccgagca tgatgggcaa cgtcaccggc atcatgagct gttgggtatc ctgaaccgtg
     2821 ctggacatcg ctccaaccgc cgcaaacatg gctgcataga aaaggaagcc gagaatgaac
     2881 agcaccagga agatgagcac aagcgccggg ctgacggcgg agaggaagga tgccccgccg
     2941 ctgctggtgg ccgcggcggc ggcgccaccg tcgtccatca tccgccccat gaacgaggct
     3001 ccgaacgacc cgaggtacag cgccgtcgcc gcccagatcg agagctgaaa cagcccgacc
     3061 aggcccacgc cgatcacctt gccgagcatc agctcgaacg ggcgaaggct ggatgcgagg
     3121 acttcgatga tgcggctcga tttttcctcg acgaccgagg tcatgacctg ggagccgtaa
     3181 atcatcagcg cgagatagag gatgaacacc atgccgtagg ccagcccgaa tgttgcggca
     3241 ccgctttggc cggtaagtct cccatccgcc accttttggg tgacgaggtc gaccctcccg
     3301 atcgcctgaa gcaccacccc gggatcgact ccaagtcgct cgagccgttc acgctgcacc
     3361 accgggcgga ggatttcctc caaacgtcgc atttccgccg gactccccac gttggctcca
     3421 tagtactgga tccggccgtt ctggagcgtc tcttcggtca gcaccagcac gccgtcgaac
     3481 gcctcggcct gcgcgcgttt cgatagcccg gtgcgggcga gcgccgagtc ccgtaccgcc
     3541 tctacccggc cgactgcggg caggcgttcc acatcgaacg gcagcggcgc ggcggaatct
     3601 ctgcgccggt tgctggccaa cgcatccgca accctcgccg tgaaggtgcc ttccaccccc
     3661 tccaccactg cgatccgttt ggtcccgctc gcgcgccgga gcagcagggc gggcagcacc
     3721 gtgaacatcg ccatgagcaa ggggaacagc atcgtggaga tgatgaacgc ccgcgtccgc
     3781 acgcgctcga cgaactcgcg ccggat
//
LOCUS       DASYRV010000448         2473 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_393564, whole genome shotgun sequence.
ACCESSION   DASYRV010000448 DASYRV010000000
VERSION     DASYRV010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2473)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2473)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2473
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393564"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..565
                     /locus_tag="VGQ24_11965"
     CDS             <1..565
                     /locus_tag="VGQ24_11965"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HEV8455604.1"
                     /translation="LAILLDRLLPDRANWALTVLATDINPEALELAHRALYREWSFRD
                     TPQWIRDRYFLQCAPEAFELAPAIREMVTFAPLNLAEGGYPTLVTNTGAMDMILCRNV
                     LMYFTPEAQRATVERVHRALLRGGWLAVSPAEASAELLRPLTPVNLPGAILYRKEAPK
                     IAPQAPVILTAQPPAPAPWKSVVEVPV"
     gene            581..1006
                     /locus_tag="VGQ24_11970"
     CDS             581..1006
                     /locus_tag="VGQ24_11970"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEV8455605.1"
                     /translation="MPICATYSQPDPETLLQRARELADQGRLDDARHLCQAALQQERL
                     SAEGHRLLAAIYQEQGEIAKALEALRRALYLEPNSAEAHFLHGSLLLRQGKRRAGLRS
                     METVVSLLRGMPSEAPLGGDGVTAARLMEMAHMYVEAKG"
     gene            1010..1603
                     /locus_tag="VGQ24_11975"
     CDS             1010..1603
                     /locus_tag="VGQ24_11975"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HEV8455606.1"
                     /translation="MVKFNWQEVHARLDRTRRMLEAGQVPSPEVRARVLRTRAATLAR
                     RLPQTEVHADTLELLTFMLGGGRYGVAATRVSAVMPLRDLTPVPCTPAFILGVVNHRG
                     RILPVLDLRKLLELPSGKLPDGCLFACLEQAGMTFGLLIETVMGTLRVAMSDLRAPAG
                     LPDARQALLLGVTPDMTAVLDLDALARDPRIVVNEAV"
     gene            1618..>2473
                     /locus_tag="VGQ24_11980"
     CDS             1618..>2473
                     /locus_tag="VGQ24_11980"
                     /inference="COORDINATES: protein motif:HMM:NF024140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEV8455607.1"
                     /translation="MNWFLNLSTKIKLFFAFSLMMLLVGTMILAAQRGISAIQESQHR
                     LYEVDFANAMDLLTFESNQNGARTAQLMMMALTRRADQELWHQDVKERAKQNDEILVR
                     LLDRNRDDPNLLRRLEELRTIRTAFLHTRDTQTIPLIYQGKIEEAKKVALGIQVERFD
                     KMRALAGELGKNSVSQAQRRIAESERKANAAARLFAVVGLAAIAGCLVLTLLLNRVIA
                     APLQNISAVAAGVAAGDLTVRVPEVRRSDEVGVLADTFRRMLESLRRMTVEIRDGVNV
                     LGTSASEIL"
BASE COUNT          460 a          745 c          788 g          480 t
ORIGIN      
        1 gcttgcgatc ctactggacc gcttgcttcc cgaccgcgcc aactgggcac tcacggtcct
       61 cgcgaccgat atcaatccgg aagctctgga gctggcccac cgcgctctct atcgcgaatg
      121 gtctttccgc gacacccctc agtggattcg ggaccggtac ttcctgcagt gtgcgccgga
      181 ggcctttgag cttgcccccg ccattcgaga gatggtgacc tttgcaccgc tgaatctggc
      241 cgaaggggga tatccgacgc ttgtgaccaa caccggggcg atggacatga ttctctgtcg
      301 aaatgtgctg atgtacttta ctccggaagc gcagcgggcg actgtggagc gggtgcaccg
      361 ggcgctactc cggggcggct ggcttgcagt tagtccggcc gaggcctcgg cggaactact
      421 acgccccctc acaccggtga atctgcccgg tgcgatcctt tatcggaaag aggcgccaaa
      481 gatcgcacca caggcgccag tgatcctcac cgctcagccc ccggcgccgg ctccatggaa
      541 gtctgtagta gaagtaccgg tctgaccgat accaccgctc atgcctatct gcgcgaccta
      601 ctctcagccc gatcctgaga cgctgctgca aagagcgcga gagctggccg atcagggaag
      661 attggatgat gcccgccacc tctgccaggc agcgctgcaa caggaacgac tgagcgcaga
      721 aggccatcgg ctcctggcgg cgatctatca ggaacagggt gagattgcca aggcgctcga
      781 ggcgcttcgt cgcgcacttt atcttgagcc gaattccgcc gaggcgcact tccttcatgg
      841 gagcctcctt ctccgccagg gtaaacgtag ggcgggccta cgatcgatgg agacggtcgt
      901 ctcgttgtta aggggaatgc cttctgaggc gccgctcggg ggcgatgggg ttacggcagc
      961 ccgcctgatg gagatggctc acatgtacgt cgaagctaaa ggctgagcga tggttaagtt
     1021 caactggcag gaagtccatg cgcgtctcga tcgcacccgt cgcatgcttg aggcgggtca
     1081 agtgccatcg cccgaggtgc gtgcccgagt cttgcggaca agagcggcga ccctggcgcg
     1141 gcgactccca caaaccgaag tacatgctga cactctagag ctgctgacct tcatgcttgg
     1201 ggggggacgg tacggcgtgg cggcgacgcg cgtgagcgcg gtgatgccgc tgcgcgacct
     1261 aacccctgtc ccttgcacgc cggcgttcat cctcggtgtc gtgaaccatc gcggacgcat
     1321 cttgccggtc ctggacttgc gcaaattgct ggagctgccg tcaggcaagc tgccggacgg
     1381 ctgcttgttc gcctgcctgg aacaggccgg catgaccttc ggcctgttaa tcgagacggt
     1441 gatggggacg ctgcgggttg ctatgtccga tcttagggca cccgctggtc tgccggatgc
     1501 gcgccaagcc ttgctcctgg gcgtgacccc ggatatgacc gcagtgctgg acctggatgc
     1561 cttggcgcgt gatccgagga ttgtggtgaa cgaggccgtc tagcgaggag aaccgttatg
     1621 aactggttcc tgaacctgtc tacgaaaatc aaactcttct tcgccttcag tttgatgatg
     1681 ctcctcgtcg gcaccatgat tctagcggcg cagcgaggca tctcggcgat ccaggagtcg
     1741 caacaccggc tgtacgaggt ggacttcgcc aatgcgatgg acctcttgac cttcgagtcc
     1801 aaccagaatg gggcccggac agcccagctt atgatgatgg cgctgacacg gcgggccgac
     1861 caggagctat ggcatcagga tgtcaaggaa cgcgccaagc agaatgatga gatcctggtg
     1921 cggcttcttg accgcaaccg agatgatccc aatttgctcc gccggcttga ggagcttcgg
     1981 acaatccgca cagcgttctt gcacacgcga gacacccaga cgatcccgct tatttaccag
     2041 ggaaagatcg aggaagccaa gaaagtggct ctcggtattc aggtcgaacg attcgacaag
     2101 atgcgcgctc tggccgggga gctgggcaaa aactcggtct cgcaggcgca gcgacgtatc
     2161 gcggagtccg agcgcaaggc aaacgcagcg gcccgccttt tcgcggtggt tggcctggcc
     2221 gcgattgctg gctgcctagt gctgacgctg ttattaaacc gggtgatcgc cgcgccgctt
     2281 caaaacatct cggccgtggc ggcaggggta gccgccgggg acctcacggt ccgcgtgccc
     2341 gaagtacgcc gatctgatga ggtgggtgtc ctggctgata ccttccgccg gatgctggag
     2401 agcctgcggc gcatgaccgt cgagatccgg gatggcgtca atgtcctggg cacctccgcg
     2461 agcgagatct tgg
//
LOCUS       DASYRV010000449         5769 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3833685, whole genome shotgun sequence.
ACCESSION   DASYRV010000449 DASYRV010000000
VERSION     DASYRV010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5769
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3833685"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..544
                     /locus_tag="VGQ24_11985"
     CDS             <1..544
                     /locus_tag="VGQ24_11985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455608.1"
                     /translation="ENGIRGGLTSGEQATARKAWLSRAATLAYPDVVLSSLAQMPGVV
                     NPLLHAQLAARARQWLVVRAALDDWRSQRRTLAPEEIIVDALYGEARLLVLLGDDRAA
                     AEWLDPTLGALRRVAPQSLAWVSGAASLVRAMALRAELADRLGDRSTAAKWARPVVVL
                     WAGADPFLQPVVQRMARLTG"
     gene            780..1823
                     /locus_tag="VGQ24_11990"
     CDS             780..1823
                     /locus_tag="VGQ24_11990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455609.1"
                     /translation="MFTQIPEFHDCQKLLTQNRQEYGPTAAIYADSQVVDLLETARQL
                     ENGSDPLKAVAVATIVSDGPYQKLWIEQGLNCLYLYTQNQNPRAFMRTAADGTDCEKR
                     VAVQSDKRLFVSEEPETTPFDKTDFSPSARWDWDDRGNQRFPFIGLPCGSAYCLYGHQ
                     GANSSFRHDRPAAVGRKARRVWKIRTWYDEQILGVIPAQGSPIEPSGVFGTVFPHPDL
                     NERTETDYENAASVYLLSAEIKLQDKIPQYYSKFGLEPPAKDSTNKVYLCKGLSSHCI
                     PDTETVPTCPAGTTDFWFAKIVSASGSTTKYRCVIRHLHPNFPIPGNARWWWDPYDEG
                     IWMRCPSGCCQVT"
     gene            1962..2465
                     /locus_tag="VGQ24_11995"
     CDS             1962..2465
                     /locus_tag="VGQ24_11995"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEV8455610.1"
                     /translation="MSARHTLSTLALALAIAACAKPAEQTAAMPMVDSAAVKAAVAEV
                     WSRWVTADTSGNVDAVVALVADSARLDLRGMPPMVGRASFRTMAETALKSMDITSLVI
                     TPEMTEAISNELAYETGNYTEAYTLDRKPMVDYGRYAAAVAKDADGQWRVQYLMAFAD
                     STVTVKK"
     gene            2477..2971
                     /locus_tag="VGQ24_12000"
     CDS             2477..2971
                     /locus_tag="VGQ24_12000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEV8455611.1"
                     /translation="MLRRATFPLAALLVVAACTPKPAESGTMATVDTAAVKTELEALR
                     GRYIAARTANDPAALAALYAEDAGVDLFGVPRLRGRASIEAAFRADSLRKYTGLEIMP
                     IGMEARTNTDASELGTYHEMTDSMGTKAHAWGRYLVAFSKDSVGQWRVIYLIGFPDST
                     KVEK"
     gene            complement(3061..3540)
                     /locus_tag="VGQ24_12005"
     CDS             complement(3061..3540)
                     /locus_tag="VGQ24_12005"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEV8455612.1"
                     /translation="MSAAALRVAYIDLLVLRGAAEELEVLCLRRGPEGRSPGSWEAVH
                     GHIDPGETPVAAALREIHEETGLKPERLYSLSRAEAFYRHSENEVVLIPVFAAFVPRN
                     AKVKLSKEHDEYDWLRSQAARVRMSWPRLRREIGYAIRLVGLGNAGTLEDVLRIPLP"
     gene            complement(3537..>5769)
                     /locus_tag="VGQ24_12010"
     CDS             complement(3537..>5769)
                     /locus_tag="VGQ24_12010"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HEV8455613.1"
                     /translation="SDEWLVPTVSSLITEQQLALLRRDAGQAASLWEALVDRRMLTDD
                     RILEAVAARFRMPLANLTMLDHHVLESVPEQVARKYHILPIRTTDSYLEIATANPFDM
                     DAEKMLAFATGREVRLFLLSPGRIREKLDELYRPDDVVSKLVSGITQAHEITQLSDEP
                     DEYKASAEEAQARPIIKLVDTLIADGITCRASDIHVEPAEGGVVVRYRIDGVLRQVMK
                     IPRSAGLPLVSRIKIMSGMDIADRLRPQDGRCRVAVNGNPVDLRVSTLPASLGEKAVI
                     RILNAKATVLSLDALGFLEEERNIVAKLLDNKEGIILVTGPTGSGKTTSLYAALRQVQ
                     GEGVNIVTVEDPVEYRLGSNIVQVQVHEKAGLTFATALRSILRQDPDVVLVGEIRDTE
                     TAQIAVQASLTGHLVLSTLHTNDAPNTVTRLVDMGMEAYKIASALRGVVAQRLLRRLC
                     PHCRTPQSDALPPRVIPFVPADAPLYQAVGCGECAQTGYRGRFAILEILVMTAELERL
                     IGRGATADDIAVAARAGGMRMLFDSGLRHVLLGETSIEELLRVTEPPREDGDGKPKPA
                     PEPERPVVERRLPASLASSGSAPGRISAPHFELSAAFELLDDLPPVATELTRKGAMVL
                     LVDDEDQLRRVMRDLLQRQGYTVVEARDGAQALEEVDRHAPDIVILDLNLPGVDGYSV
                     LSQLRSRHATRQLPVIVLTAKGDEDNEVRVLQLGADDFLTKPFRAKALAARLESALSR
                     RRV"
BASE COUNT         1005 a         1907 c         1856 g         1001 t
ORIGIN      
        1 ggaaaatggc attcgcgggg gactcacttc cggggaacaa gcgaccgccc ggaaggcctg
       61 gttgtcccgc gctgcgacgc ttgcttatcc ggatgtcgtc ctatcatcgc tggctcaaat
      121 gccgggcgtc gtcaatcccc tgcttcatgc gcagctcgcg gcacgtgcgc gacagtggtt
      181 agtggtccga gctgctctgg atgactggcg gtctcagcgt cggacgctcg ctcctgagga
      241 gattatcgtc gacgcgctct acggggaggc acggcttctc gtcctgctcg gagatgaccg
      301 agcagctgct gaatggctgg acccgacgct tggtgctttg cgccgagtgg cgccgcagag
      361 cctcgcgtgg gtcagtggcg ctgcatccct ggtgcgcgca atggcactgc gcgcggaatt
      421 ggcagaccgt ttgggcgacc gctctaccgc cgcgaaatgg gcccggcccg tcgtggtgtt
      481 atgggcgggc gccgatccat tcctgcagcc cgtagtccaa cggatggctc gcctaaccgg
      541 gtaggcggcc aagagaggag agggacatga cgatgacgcg tggactctgg ggtggatgcg
      601 tgatggcttg cgggctgctg ctgagcgcgt gccaaccgga tgtcgcggta ccgccggagg
      661 ggtactactc ggtgccacag gaaactaggg tgacagtctg cccgcagcat gactcggtct
      721 ggattccatc cagggccgga atgttttgga cccgacgcgc aactttggcg cttccaggcg
      781 tgttcactca gattccggag ttccacgatt gccagaaact gctcacgcag aatcgccagg
      841 aatatggccc gacggcggcg atctatgccg attcgcaggt cgtggacctc ctagagactg
      901 cacggcaact ggagaatgga agtgatccgc tcaaggccgt cgcggtggcg actatcgtga
      961 gcgacggccc ctaccagaag ctctggatcg aacagggctt gaactgtctc tatctctaca
     1021 cccagaacca gaatcccaga gcgttcatgc gcaccgcggc cgatggcacg gactgtgaga
     1081 agcgggtcgc tgtccaatca gacaaacgtc tatttgtcag cgaggagccg gagaccaccc
     1141 ccttcgacaa gacggatttc tcgccctcgg cacgttggga ttgggacgac agagggaatc
     1201 agaggttccc attcatcgga ttaccgtgcg ggagcgccta ctgtctttat gggcaccaag
     1261 gggcgaattc ttcgtttcgg catgatcgtc ctgctgcagt gggacgcaag gcacgccggg
     1321 tctggaagat acgaacctgg tacgacgagc agatcctggg agtgatccca gctcaaggga
     1381 gtcctatcga acccagcggg gtcttcggca ccgtatttcc tcaccccgac ctgaacgagc
     1441 gtaccgagac cgattatgag aacgccgcct cggtatacct gctcagcgcc gaaatcaaac
     1501 tccaagacaa gattccgcag tattattcga agttcggctt ggagcccccc gctaaggaca
     1561 gcaccaacaa ggtttacctt tgcaaaggcc tgtcctcgca ttgcattccc gacaccgaga
     1621 cagttcctac ctgcccggct ggaactacgg atttctggtt cgcgaagatc gtctcagcaa
     1681 gcggctcgac gaccaagtac cgctgtgtca tccgccacct acatccgaac ttccccatcc
     1741 cgggtaatgc gcgctggtgg tgggacccgt atgatgaagg aatctggatg cggtgcccca
     1801 gtggttgctg ccaagtgacc tgagacctac tacacagggg gaggtgagat ccactctcat
     1861 ctccccactc accctagcgc aaccccgcct tcgagcgtag tctattgctc cccttagact
     1921 tatccggtca ggccgtccga cccctcacgg aggcttttcg catgtccgcc cgtcacaccc
     1981 tttcgaccct ggcgctcgcg ctcgccattg cggcctgcgc caagccggcg gagcagaccg
     2041 ccgctatgcc catggtggat tccgcggccg tcaaagccgc cgtcgccgag gtgtggtccc
     2101 gttgggtgac ggccgatacc tccgggaacg tcgacgcggt cgtcgccctg gtagccgaca
     2161 gcgcccggct cgacctgcgc gggatgcccc ccatggtggg acgcgcgagc ttccgcacca
     2221 tggcggagac ggccctgaag agcatggata tcacttcgct ggtgatcacc cccgagatga
     2281 ccgaggccat cagcaacgag ctcgcctacg aaacgggcaa ttacaccgaa gcgtacacgt
     2341 tggaccgcaa gccgatggtc gactacggac gctacgccgc ggccgtcgcc aaagacgcgg
     2401 acggacaatg gcgggtccag tatctcatgg ctttcgcgga ttccaccgtc acagtcaaga
     2461 agtgaggaac ctaccaatgc tccgacgcgc gactttcccg ctcgccgctc tcctcgtggt
     2521 cgccgcctgc accccgaagc cggcggagtc cggcaccatg gccacggtcg acaccgccgc
     2581 cgtcaagacc gagctcgaag cgctccgcgg ccgctacatc gccgcgcgga ccgccaatga
     2641 ccccgctgcg ctggccgcgc tctatgcgga ggatgccggg gtcgatctgt ttggcgtgcc
     2701 acgcctccgg ggccgggcca gcatcgaagc ggcctttcga gccgactcgc tgcggaagta
     2761 caccgggctg gaaatcatgc cgatcgggat ggaggcccgt accaacaccg acgcctccga
     2821 gctcggtacc tatcacgaga tgaccgactc gatgggcacc aaggcgcacg cgtggggccg
     2881 ctatctcgtc gcgttcagca aggactcggt cggccagtgg cgggtgattt acttgatcgg
     2941 attcccggat tcgaccaagg tggagaagta gcagcctcga gctttcgctc cccccgccgg
     3001 aagcccacga gacagagcga gtgcctaacg gggaatgaac gaagtcggaa ggtcggaaga
     3061 ctacgggagc ggaatccgca gcacgtcctc cagcgtgccc gcattgccca gcccaaccag
     3121 cctgatggcg tagccgattt cccgccggag ccggggccag ctcatccgaa cgcgagccgc
     3181 ctgagagcgc agccaatcgt actcgtcgtg ctccttgctc agcttgacct tcgcattgcg
     3241 agggacgaac gcggcaaaga cggggatgag caccacttca ttctcactgt gccggtagaa
     3301 cgcctcggcc cggctcaggc tgtaaagccg ctcgggcttg aggccggtct cttcgtggat
     3361 ctcgcgcagc gcggccgcca ccggcgtttc gcccggatcg atatggccgt ggacggcctc
     3421 ccacgatcct ggggagcgac cctcggggcc ccgccgtaga cagagcacct cgagctcttc
     3481 tgctgcaccg cgcagcacga ggaggtcgat gtacgcgacg cgcaacgctg ccgcgctcat
     3541 actcgccttc tgctcaacgc gctctcgagc cgggccgcca gggccttggc ccggaagggc
     3601 ttggtgagga agtcgtcggc gccgagttgc aacaccctga cttcattgtc ctcatcgccc
     3661 ttggcggtga gcacgatgac cggaagctgc cgggtggcgt ggcgggagcg cagctgagac
     3721 agcaccgaat agccatccac gccgggcagg ttgagatcga ggatcacgat gtcgggagcg
     3781 tggcggtcca cttcctcgag cgcctgggcg ccatcgcgcg cttccacgac cgtgtacccc
     3841 tgccgctgca gcaggtcgcg catgacccgg cggagctggt cttcgtcgtc caccagcagc
     3901 accatcgcgc ctttccgcgt gagctcggtg gcgaccgggg gcaggtcatc cagcagctcg
     3961 aacgccgccg acagctcgaa gtgcggcgcc gagatgcggc cgggagcgct gccggacgac
     4021 gccaggctgg ccgggaggcg ccgttccacg accggacgct cgggctccgg cgcgggcttc
     4081 ggtttcccgt cgccatcctc gcgcggcggc tcggtcaccc gcaagagctc ctcgatcgag
     4141 gtctcgccga gcagcacgtg gcggagcccg ctgtcgaaga gcatgcgcat gccgcccgcg
     4201 cgcgcggcca ccgcgatatc gtccgccgtc gccccgcggc cgatcagccg ctcgagctcg
     4261 gcggtcatca ccagaatctc gagaatggca aagcggccgc gatagccggt ctgcgcgcac
     4321 tcgccgcacc cgaccgcctg atagagcggc gcgtccgcgg gcacgaacgg aatcaccctc
     4381 ggcgggagcg cgtcgctttg cggggtgcgg cagtggggac agagccgccg cagcagccgc
     4441 tgggcgacga ctccccgcag cgcggaggcg atcttgtacg cctccatccc catgtcgacc
     4501 aggcgggtga cggtattggg cgcgtcgttg gtatgcagcg tcgagagcac caggtggccc
     4561 gtcagcgatg cctgcaccgc gatctgcgcc gtctccgtgt cgcggatttc gccgaccagg
     4621 actacgtccg ggtcctgccg caggatggag cggagcgccg tcgcaaaggt gagccccgcc
     4681 ttctcgtgca cctgtacttg cacgatgttg gagcccagcc ggtattccac cggatcctcg
     4741 accgtcacga tgttgacgcc ctcgccctgc acttgccgga gcgcggcgta caacgaggtg
     4801 gtcttccccg acccggtcgg accggtgacc aggatgatgc cctccttgtt gtcgagcagc
     4861 ttggcgacga tgttgcgttc ctcctcgagg aatcccagcg cgtccagcga cagaaccgtc
     4921 gccttggcgt tgaggatccg gatcaccgcc ttctcgccca gcgaggccgg cagcgtcgag
     4981 acccgcaggt cgacgggatt tccgttcacc gccacgcggc agcggccgtc ctgcggccgc
     5041 agccgatccg cgatgtccat cccggacatg atcttgatgc gggagaccag cggcaatccg
     5101 gcggagcggg ggatcttcat gacctggcgc agcacgccat cgatacggta gcgaaccacc
     5161 acgccgccct cggcgggctc cacgtggatg tcgctggccc ggcaggtgat gccgtcggcg
     5221 atcagggtgt cgaccagctt aatgatgggg cgcgcctggg cctcttcggc gctcgccttg
     5281 tactcgtccg gctcgtcgct gagctgggtg atttcgtggg cttgggtgat gcccgagacc
     5341 agcttggaga cgacgtcgtc gggccggtac agctcgtcga gcttctcccg gatccggccc
     5401 ggcgaaagca ggaagagtcg cacttcccgc cccgtcgcga acgccagcat cttctcggcg
     5461 tccatgtcga atggattggc cgtcgcgatc tcgaggtagg aatcggtggt ccggatcggc
     5521 aggatgtgat acttgcgggc cacctgctcg ggaaccgact ccaggacatg gtggtccagc
     5581 atcgtcaggt tggctagcgg catccggaag cgcgccgcca ccgcttcgag aatccggtca
     5641 tcggtcagca tccgccgatc caccagggct tcccataagg aggccgcctg gcccgcatcc
     5701 cggcgcaaca gcgccagttg ctgctcggtg atgagcgagg agacggttgg gacgagccac
     5761 tcgtcgctg
//
LOCUS       DASYRV010000450         3582 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1022173, whole genome shotgun sequence.
ACCESSION   DASYRV010000450 DASYRV010000000
VERSION     DASYRV010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3582
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1022173"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1314
                     /locus_tag="VGQ24_12015"
     CDS             <1..1314
                     /locus_tag="VGQ24_12015"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEV8455614.1"
                     /translation="MTDTWMGDDFFHQGAFRLSYGFEYAGAMELSNDQSVPLPIGSWD
                     TYDWYLELGPLTNVDAKYFHGKVPTWDAFADHPAYDAYWKTRAVQRVLRPPAVATLTV
                     GGWWDQEDRYGPLATYQALERRDSANRNFLVMGPWNHGGWRRPLNRMPVVDPGTYEAY
                     LRDVEAPWFAYYLKGKGSPTQPEAMLYDAGAKRWRSFDAWPPRVGATPRRLYLHGGGR
                     LSFDPPKASEAPFDQFVSDPARPVPYRLRPVEQTYDPRGSRWRTWETEDQRFVEGRPD
                     VLTWVSEPLSEDLLIAGDINAKIVASTTGRDADWAVKLIDVFPDSMPENWSQGGYQLM
                     VAHEIMRGRYRKSFSVPAPLQPNTPLDFTVDLHQQSYTFRKGHRLMVQIQSTWFPLYD
                     RNPQTWVPNIFQAKTSDFRAQTHRVWHTPRFASGIEVTVVRTADR"
     gene            complement(1311..2261)
                     /locus_tag="VGQ24_12020"
     CDS             complement(1311..2261)
                     /locus_tag="VGQ24_12020"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEV8455615.1"
                     /translation="MLSWIGSRRARELGRIAMVLLIAACASSGDAVPPVSLPEPLAIM
                     RPGLVRPRPRLAKPSVPPRAAVPVRLPPARSRVPERAPEPPRAARSRPPVKVRVDSAA
                     LERAVTRQFAYEPLSQVLAKRTRKAELADRVAAAVVYEAERNRISPSLLAAVLLIENA
                     PFDTTAISSQGAVGLMQVMPVHIGSYGCPSRDLHSVEANVCHGARILHMYIKRAKSVP
                     LALKRYNGCVRGRNTPRCHRYPGRVLRVASKLRHEMLVNAAGFEGGLPEDVVPGEPDL
                     AVAVPSQPVLEPDTNIITTTTSASECTTFIGCLKHRWSQR"
     gene            complement(2789..3544)
                     /locus_tag="VGQ24_12025"
     CDS             complement(2789..3544)
                     /locus_tag="VGQ24_12025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455616.1"
                     /translation="MDKRLFALVLLCVLGGCAGGPSTSAPTPPRPNAYRVLFIGNSLT
                     YTNDLPGTVAAMALTAGDTIQTQTVAAPNLALIDHVAGQTNAVEVIKSGHWDYVVLQQ
                     GPTPLPLYRDTLILATKWLQPYIRDADARSAQLMVWPSATKRASFDEVRRSSQLAAKA
                     VGGVFLPAGEAWRAAWAAGPRIALYGPDGFHPSELGTYLTALVVYEGLTGRDVTTLPP
                     RITVAGKRLQIPTATVRLLQRAAHETVVRFREE"
BASE COUNT          635 a         1170 c         1164 g          613 t
ORIGIN      
        1 atgaccgaca cctggatggg cgacgacttc tttcaccagg gcgcgttccg gttgtcctac
       61 ggcttcgagt atgccggggc catggagctg agcaacgacc agtcagtgcc gctgccgatc
      121 ggctcgtggg acacctacga ctggtatctc gagctcggcc cgttgaccaa cgtggacgcg
      181 aagtacttcc acgggaaggt gccgacttgg gacgcgttcg ccgaccatcc ggcgtatgac
      241 gcgtactgga agacacgggc cgtgcagcgg gtgctccgcc cgcccgcggt ggcaaccctc
      301 accgtcggcg gctggtggga tcaggaagat cgctacgggc cgctcgccac ctaccaggcg
      361 ctcgaacgcc gcgactcggc gaatcgtaat ttcctggtga tggggccgtg gaaccatggc
      421 gggtggcgcc ggccgctcaa ccggatgccc gtggtggacc cgggaaccta tgaggcgtac
      481 ctgcgcgatg ttgaggcgcc atggttcgcg tactatctca agggcaaagg gagccccact
      541 cagccggaag ccatgctcta tgatgccggc gccaagcgct ggcgctcctt cgatgcctgg
      601 ccgccgagag tgggcgcgac tccacgccgt ctctacctcc atggcggggg caggctctcg
      661 ttcgatccgc ccaaagcgag cgaggcgccc ttcgaccagt tcgtctccga tccggcgcgc
      721 ccggtgcctt accgtctccg ccctgtcgag cagacctacg acccccgcgg ctcgcgctgg
      781 cgcacgtggg agaccgagga tcagcgtttc gtggaaggcc gccccgacgt cctgacctgg
      841 gtctcggagc cactgagcga ggacctgctc atcgcgggag acatcaacgc caagattgtc
      901 gcctcgacca ccgggcgcga cgcggactgg gcggtgaagc tgatcgacgt attccccgac
      961 agcatgccgg agaactggag ccagggcggc taccagctca tggtggccca cgagattatg
     1021 cgaggacgct accggaagag cttctcggtg ccggcgccac tgcagcccaa caccccgctc
     1081 gattttacgg tggacctgca ccagcagagc tacaccttca ggaagggcca ccggctcatg
     1141 gtgcagattc aaagcacctg gtttccactc tacgaccgga atccccaaac ctgggtgccg
     1201 aacatcttcc aagccaagac atcggatttc cgggcgcaga cccaccgggt ctggcacaca
     1261 ccccggttcg cgtcagggat cgaggtcacg gtggtgcgga cggcggaccg ttagcgctga
     1321 ctccagcggt gtttcaggca gccaatgaac gtcgtgcact cgctggccga cgtggttgtc
     1381 gtgatgatgt tcgtatccgg ctccagcacc ggctgagacg gcaccgctac tgccaagtcg
     1441 ggctcgcccg ggaccacatc ctccggcagc ccaccctcga atcctgcggc gttcaccagc
     1501 atctcgtgcc gtaacttgga cgcgacgcga agcacccgcc ctggatagcg gtggcagcgc
     1561 ggtgtgttcc tgccccgcac gcagccgttg tagcgcttga gcgcaagcgg caccgatttg
     1621 gcccgcttga tatacatatg caggatcctg gcgccgtgac agacattggc ctcgacgctg
     1681 tgcaagtccc gcgacgggca gccgtaactg ccgatgtgca ccggcatcac ctgcatcaat
     1741 cccacggcgc cctggctgct gatggctgtc gtgtcgaacg gcgcgttctc gatcagcagc
     1801 acggcggcca gaaggctcgg actgatccgg ttgcgctcgg cctcgtacac cacggccgca
     1861 gcaacccggt cggccagctc ggccttgcgg gtccgcttgg ctagaacctg cgacaacggt
     1921 tcgtaggcga attgcctggt cacggcgcgc tccagtgcgg cgctgtcgac gcggaccttc
     1981 accggcggac gcgaccgggc ggcacgcggc ggctccggtg cgcgctccgg cacgcgagaa
     2041 cgcgcgggcg ggaggcgcac cgggaccgca gcacggggcg gtacggatgg cttggccagg
     2101 cgcgggcgcg ggcgtaccag ccccggcctc atgatggcaa gcggctccgg tagagaaacc
     2161 ggaggcaccg cgtcgccgct cgaggcgcac gcagcaatca gcaaaaccat cgcgatacga
     2221 ccaagttcac gcgcccgacg gctaccgatc catgagagca tggcgctcct gaacggagga
     2281 tgctcggacg atggctcgca ctcggtgggc gctcaagtgc tcagtatttg acggcgacga
     2341 ggaacgcgac attgtctggt ctgccggatt gaccctgcca ccctggaagt cgcacccctc
     2401 acccgaatac gaaggttcgg tgcaggcgtt ggcagcctcg tatgccaggc ccattgttac
     2461 acgagccggg tccattcttt ggcttgattc gctcttgaga ggagctgacc gtgcaaggtt
     2521 ctggaaccag ctccggcctc acctatcggg atgcgctgtg cttcggctgg atcgatggag
     2581 tcggttgccc tgagtcaccc gtgtcagcgg ctcgtgtaca ctagcgtcat ctgggcctgc
     2641 tggatgaaga gcaatagagg gctgggcgac gggatcaccg gaacagtgct gggggtataa
     2701 agcatacgag ccatgttgac gctccatcga cggcgcttag ccctcacgtg cttattagaa
     2761 cgtcatggat gcgctcgtta gttcccgcct attcctcccg gaagcgaacc accgtttcat
     2821 gcgctgcccg ttgcagcaac cgaacggtgg ccgtgggaat ctggagccgc ttccccgcca
     2881 cggttatcct cggcggcaat gtcgttacgt ccctgccggt gagtccctca tacacgacaa
     2941 gggcggtgag gtaggtgccc agctccgaag gatggaaccc atcgggccca tagagcgcaa
     3001 tccgggggcc ggccgcccag gctgctcgcc acgcttcccc ggcaggcaga aacactccgc
     3061 ccaccgcctt ggcagcgagc tggctcgagc ggcgtacctc gtcgaaactg gcgcgcttcg
     3121 tggccgacgg ccagaccatc agctgagcgc tccgggcgtc ggcgtcccgg atgtacggct
     3181 ggagccactt ggtagcgagg atcagggtgt cacgatagag cggcaagggc gtggggccct
     3241 gctggagcac gacgtaatcc cagtgccccg atttgatcac ctccaccgcg ttggtctggc
     3301 ccgccacgtg atcgatgagc gccaggttgg gcgctgcgac ggtctgggtc tggatcgtgt
     3361 caccagcagt caacgccatc gcggccaccg tgcccggaag atcgttggta taggtaaggc
     3421 tgttcccgat gaagagcacc cggtatgcgt tcggcctggg cggcgtagga gcggacgtcg
     3481 atggaccgcc ggcgcaacca cccaggacgc aaagcagcac gagcgcgaaa aggcgtttgt
     3541 ccaagcctaa cctccacaat ttctagagct gggttagttc ca
//
LOCUS       DASYRV010000451        10781 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1847342, whole genome shotgun sequence.
ACCESSION   DASYRV010000451 DASYRV010000000
VERSION     DASYRV010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10781
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1847342"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..282)
                     /locus_tag="VGQ24_12030"
     CDS             complement(<1..282)
                     /locus_tag="VGQ24_12030"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8455617.1"
                     /translation="MVRSDLTAPESAAAARHRRALVVDDEPTIRSALVRYLRRRGWQA
                     DEAEDGRSALTKLGQAAPGEYEVVISDIRMPLYSGVQLHDWLAEHRPDLF"
     gene            420..1208
                     /locus_tag="VGQ24_12035"
     CDS             420..1208
                     /locus_tag="VGQ24_12035"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEV8455618.1"
                     /translation="MSDELLSQSGGPIHRLMLNRPARRNALTPALARQLAQEIEQVEE
                     VGEARVIVLSGVGGHFCAGLDLHWLSSLGGVPSIADLQHGLSDFQSAVIAIVRCPIPV
                     IAIVQGTAAGFGFDLALACDMRLAGSSASFTSAFARMGLVPDGGSTFTLPRLVGVGRA
                     LRLLMSNETLDAATALSIGLVEEVIDDATLDDGALRIVGDLLASADSSIRAIKRLCRA
                     PEVGALEQALSTEGAAQLQALQGPDFLLRLEAFAVRASARSEDT"
     gene            1205..2014
                     /locus_tag="VGQ24_12040"
     CDS             1205..2014
                     /locus_tag="VGQ24_12040"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEV8455619.1"
                     /translation="MSQRAGVFRPDLLAGHVALITGGGTGIGLGIASALAGAGAHVAI
                     ASRKPEHLGPAADQLRAGGARVSALEVNVREPESVARMVERVGNEHGRIDILVNNAAG
                     NFYAPSATISPNGWRAVVETDLYGTFFCCQAVYPLMKAQGAGRIVSISMTLHYRGWPL
                     MAHATAAKAGVDALTRTLALEWAKDHITVNAVAPGPIPTEGVRKAFTPPGSDAPDLFG
                     MEKYAADAIPLGRWGTPDDIGQMVTYLASPAADWITGAIMVVDGGAWLACS"
     gene            2005..2703
                     /locus_tag="VGQ24_12045"
     CDS             2005..2703
                     /locus_tag="VGQ24_12045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455620.1"
                     /translation="MFLGHYGVAFALKRAEPKLSLGTLFVAVQLLDLLWGIFVLLGWE
                     HARIVPGNTAITPLEFWDYPISHSLIGALAWSIVAAACYYSWPTRDTTRHWQAAAVVG
                     LAVFSHYPLDVLVHLPDLPIMGNDSPKLGVGLWIHPVATMVAELLVFGLGLAVYVALR
                     SKRHRVRPGRLAVLVIVLLGTYLASVYGPLPPNMTTVAVSTIGFILLVAALAAWADRR
                     PSPVEFEAQRFSPR"
     gene            2707..3078
                     /locus_tag="VGQ24_12050"
     CDS             2707..3078
                     /locus_tag="VGQ24_12050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HEV8455621.1"
                     /translation="MDRLFFSIGALSALIAVAAGAFGAHALRARLSPEYLAVFETAAR
                     YQMYHALGLLAVAWAVARWPGALPQWAGWLFLAGTMLFCGSLYALALTGARWLGAITP
                     LGGIAFLAGWLCLFLSVGRSQ"
     gene            complement(3427..4230)
                     /locus_tag="VGQ24_12055"
     CDS             complement(3427..4230)
                     /locus_tag="VGQ24_12055"
                     /inference="COORDINATES: protein motif:HMM:NF021214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HEV8455622.1"
                     /translation="MDERTRPTLPYEWAWSLHPSVLMGTGLLGALYFYGIGPLRRRLD
                     LGPPASPWQVASFCAALLVLLLSLNGPLHDLSDYYLFSVHMLQHLVLTLLFPPLLLMG
                     IPGWLLRPLLRRPDVLAVARLLTRPWLAALLFSVSIAAWHLSPFYDLMMRNHEVHIAT
                     HLMFMVTATLMWWPVMSPLPELPPLRPGIGILYLFLVGIPMQVVGALITFADEVLYPW
                     YVAAPRTWGLSPLDDQQLGGLLMWIPGNLWMFAAIAVLFFRWSRESENA"
     gene            complement(4319..4666)
                     /locus_tag="VGQ24_12060"
     CDS             complement(4319..4666)
                     /locus_tag="VGQ24_12060"
                     /inference="COORDINATES: protein motif:HMM:NF015582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase subunit IV family protein"
                     /protein_id="HEV8455623.1"
                     /translation="MSTAHPSEHSHPSAAVYAKVGLVLFVLTALEVGLYEITYGNHAG
                     AFAEDIKPFFVPMLLLLSAAKFALVAMFYMHLRQDSKLFTGIFVFPLTIAAVIIVGLI
                     LLMSYHLAFSRSG"
     gene            complement(4690..5328)
                     /locus_tag="VGQ24_12065"
     CDS             complement(4690..5328)
                     /locus_tag="VGQ24_12065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HEV8455624.1"
                     /translation="MTAVAHEVPHGLEHATSTGLDSRKVAIWTFIGSECMFFATLISN
                     YVVNKGRSLVGPFPHEPWTSPSGEHFKPILEIPLVTLGTALLLFSSLFVVLALSGAQR
                     GSRKALVGWLAATIFCGMFFVGMQVYEFTHFVHEGLKLSTNLFGASFYTLTGFHGTHV
                     TIGVIWLITLWILALRGKIPPSKSLNLEMAALYWHFVDVVWIIIFPVVYLIK"
     gene            complement(5437..7275)
                     /gene="ctaD"
                     /locus_tag="VGQ24_12070"
     CDS             complement(5437..7275)
                     /gene="ctaD"
                     /locus_tag="VGQ24_12070"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HEV8455625.1"
                     /translation="MATRVLDQQRARAAAHGEKSGVWSWITTVDHKRIGLLYGTTAFF
                     FFLLGGVEALLLRIQLGAPDNTFLSPERYNQLFTMHGTTMIFLAIMPLSAMFFNYMIP
                     LLIGARDVAFPRLNAFSYWVFLLGGLFLNASWFFNAAPDQGWFGYANLTSRQFSPGPN
                     VDFWMFGLQILGIASLAAAVNFFVTVINLRAPGMTLMRMPMFVWMSFITQVLLLLAFP
                     VITVALILLMFDRFFGTHFFVPAGGGDPILWQHFFWIFGHPEVYILILPAFGIISEVL
                     PVFSRKPLFGYAAMVFSGVFIAFLGFGVWSHHMFSTAMGPIADTFFALSTMLIAVPTG
                     VKIFNWIGTMWGGSLQFRTPMYFAVAFIAMFIIGGLSGVMHSSPPADLQQTDTYFVVA
                     HFHYVLFGGSIFGLTAGAYYWWPKMFGRMLDERLGKIHFWLMLIGFNLTFFPMHWLGL
                     SGMPRRVYTYPAGLGFELLNQLETVGSFILALGFLVFLVNVFQAWRRPANAPADPWNG
                     ATLEWAIPSPPQEFNFPETPVVHSRDALWEAKRASRGPLPEPARVSGAGIHLPNPSYW
                     PAVAALGVAAVFVGVMLLGHIGPWGIVAGVALLFFGVYRWAFEPAG"
     gene            complement(7333..8439)
                     /gene="coxB"
                     /locus_tag="VGQ24_12075"
     CDS             complement(7333..8439)
                     /gene="coxB"
                     /locus_tag="VGQ24_12075"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR02866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HEV8455626.1"
                     /translation="MTPRTAPRRPLCLVSALCLLSLVLAGCSPEHYPQTTLLPRGDFA
                     RIADDLLDITVKWAVLVFVLVEGVLVYAIFRFRGKPGDPEPRQSHGNTTVEIIWTVIP
                     ALILAAIAVPTVRAIFQTNSFPKQGALTIEVIGHQWWWEFRYPEYNLTTANEIHVPVG
                     RTVALRMGSNDVIHSFWVPQFAAKRDVFATRESRMWFKAEVDGEYPGQCAEFCGIQHG
                     RMGYRIRAQKPADFQAWVTHMQTLNPKAASTARADSGVRTASQGATIQQPASPQAQGD
                     QYAAGEKLFTAKGCVACHALYAVNAPKGMVGPNLANVGARSYIAAGTLKNTDENLAHW
                     IRDPQGIKKGVLMPNLGVSEPDSRALAAFLRAHK"
     gene            complement(8527..9819)
                     /locus_tag="VGQ24_12080"
     CDS             complement(8527..9819)
                     /locus_tag="VGQ24_12080"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P N-terminal domain-containing
                     protein"
                     /protein_id="HEV8455627.1"
                     /translation="MTTWGALILAIHSSAQAQVGSPAGPIPVVQLEARRAALFARLGN
                     AVAILPSAKVKSIEGDYPQDSDYREHNDFFYLTGLEAPGAWLVLVARKSGRDQAVLYL
                     PARDSTMEQWTGPRLGPGAEAGRLTGITDVRPADRAETEIRELVLGSGSPARSGALYL
                     SQRRQQGSEFRPVKIEDLDPVIARLRLVKDPDELTRLRRATAITAEALKESMRVARPG
                     MWEYELEAVIEYTFRRNGAERVGFPSIVASGPNAVTLHYDENRRQVQAGELVVEDVGA
                     EFGYYSADMTRTIPISGRFTPRQRALYDLVLGTQQAAIDSVRPGTNLAALNRVARTYL
                     RDNSGDLCGSDSCVPYFTHGLSHWLGMDVHDVGSFGARLEPGMVLTVEPGIYLPSERV
                     GIRIEDDVLVTPGGHEVLSHAAPRTAEEIEQIMAHGVP"
     gene            complement(9906..10598)
                     /locus_tag="VGQ24_12085"
     CDS             complement(9906..10598)
                     /locus_tag="VGQ24_12085"
                     /inference="COORDINATES: protein motif:HMM:NF013586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HEV8455628.1"
                     /translation="MFAQFALTAAVCLLVACHQNPPPPDSSPAAASVNTPPLPIAPDA
                     AAETLLVDIRSRDSTIRVDARYATSNNFTGKPLPGYEAPRVLLRREAAVALARVQTRL
                     RSEGLGLLVYDGYRPVRATLAMVDWAKRTGREDLLKQGYIARRSRHNLGLAVDLTLVE
                     LGTGVELDMGTAFDTFAEAAHTANAEGRVRRNRQILVRAMEAEGFSNYDQEWWHFGYP
                     VAGALPFDMVIR"
BASE COUNT         2037 a         3402 c         3476 g         1866 t
ORIGIN      
        1 aaaaaggtcg ggacgatgct cggcgagcca gtcgtggagc tgcaccccgg agtagagggg
       61 catccggatg tcggagatta ccacctcata ttcccccggt gccgcctgcc ccagctttgt
      121 caatgccgac ctgccatcct ccgcctcatc agcctgccag ccgcgccgcc gcagatagcg
      181 caccagcgcc gaccggatgg tcggctcatc gtcgacaacc agcgctcgcc gatggcgagc
      241 ggcggctgcc gattcaggtg ccgtgagatc ggaacgtacc aatgagcctg gttgaagccg
      301 aggctgatgg accgggcagg ggacccgcgg gtgtgaactc cagcttcgtc gtataatact
      361 atcctgaatc cgccggccgg gaagaagcga ggcgggcaca ctccgagcac gagatttgta
      421 tgtccgacga gctcctgtcc caatccggtg ggcccatcca ccgactgatg ctgaaccgcc
      481 cggcccggcg caacgcgctc acccctgctc tggcacggca actggcccag gagatcgagc
      541 aggtcgagga ggtcggcgag gcgcgcgtca tcgtcctctc cggagttggc ggacacttct
      601 gcgccgggct tgacctccac tggctcagct ccctcggtgg cgtacccagc attgccgacc
      661 tgcagcatgg cctgagtgac ttccagtccg ccgtgatcgc catcgtgcgc tgccccatcc
      721 cggtgatcgc gatcgtgcaa ggcacggcgg caggcttcgg cttcgatctc gccctcgcct
      781 gcgacatgcg gttggccggt tccagcgcca gctttacctc cgcgttcgcg aggatggggc
      841 tggtacccga cggcgggtcc accttcacgc tcccccgtct ggttggggta ggccgcgcgc
      901 ttcgcctgct catgtccaac gagacgctcg atgcggcgac ggcgctctcc atcgggctgg
      961 tggaagaggt gatcgacgac gcgaccctgg acgacggtgc cctccggatc gtcggtgatc
     1021 tgctggcctc ggcggattcg agcatccgcg cgatcaagcg actctgccgc gcgcctgagg
     1081 tcggtgccct ggagcaggcg ctctcgaccg agggagcggc tcagctccag gcgctccagg
     1141 gcccggactt cctcctgcgc ctggaggcat tcgccgtgcg cgcttccgct cgaagcgagg
     1201 acacgtgagc cagcgcgccg gcgtgttccg gccggacctg ctcgctggac acgtggcgct
     1261 gattaccgga gggggaaccg gtatcggtct cggcatagcc tcggcgttgg ccggggcggg
     1321 agcgcacgtg gccatcgcca gccggaagcc tgagcacctg gggccggcgg cggaccagct
     1381 tcgcgcgggc ggcgcacgag tgagcgcgct cgaggtcaac gtgcgggagc cggagtcggt
     1441 cgcgcgcatg gtggagcgcg tgggcaacga gcacggcagg atcgacatcc tggtcaacaa
     1501 cgccgcgggg aacttctacg ccccgagcgc gacgatctct ccgaatggct ggcgtgccgt
     1561 ggtggagacc gacctctacg gcaccttctt ctgctgccag gcggtgtatc ctctcatgaa
     1621 ggcgcagggc gccggtcgca tcgtctcgat ctcgatgacg ctgcactacc gcggctggcc
     1681 gctcatggcc cacgcgacag ctgccaaggc cggcgtggac gccctcactc gaaccctcgc
     1741 gctggaatgg gccaaggacc acatcaccgt caacgccgta gctcccggtc cgatcccgac
     1801 cgagggggtc aggaaggcct ttacgccacc cggcagtgat gcgcccgatc tgttcggcat
     1861 ggagaaatat gcggccgatg ccatcccgct cggccgttgg gggactcccg acgacatcgg
     1921 tcagatggtg acgtatctgg cgagccctgc ggcagactgg atcaccggcg ccatcatggt
     1981 ggtcgatggg ggggcttggt tggcatgttc ctaggccatt acggcgttgc attcgcgctc
     2041 aagcgcgccg agccaaagtt gtcgctcggc acactgttcg tggccgtcca gctactcgat
     2101 cttctgtggg gaatcttcgt gctcctcggc tgggagcacg ccaggatcgt ccccggcaat
     2161 accgcaatca ctccgctcga attctgggat taccccatct cccacagcct gatcggcgcg
     2221 ctcgcatgga gcattgtggc ggcggcgtgc tactactcgt ggcctacccg ggacaccact
     2281 cgccattggc aggcggctgc cgtcgtgggg ttagcggtgt tctcgcacta tccactcgat
     2341 gtactggtac acctgcccga tctcccgatc atgggaaatg actctcccaa gctcggggtg
     2401 ggtctctgga ttcatccggt tgccacgatg gtggcggagc tcctcgtctt tggtctcggt
     2461 ctggccgtgt acgtagcgct caggtccaag cggcaccggg tccgtccagg gcgcctcgcc
     2521 gtgctcgtca tcgtgcttct cggcacctac ctggccagcg tctatggccc gcttccacca
     2581 aacatgacca ccgtcgcggt gagcactatc gggttcattc tgctggttgc agcgctggct
     2641 gcgtgggcgg accggcgtcc ctcaccggtc gagttcgaag cccagcgttt ctcgccccgc
     2701 tgaacgatgg accggttgtt cttctcgatc ggcgcgctgt ccgccttgat agcggtggct
     2761 gccggtgcat tcggagcgca cgcattgcgc gcccgcctga gtccggagta cctggcggtg
     2821 ttcgagaccg ccgcccgcta ccagatgtat cacgcgctgg ggctattggc cgtcgcctgg
     2881 gccgtggcac ggtggcccgg tgcgctgcca cagtgggctg gctggctgtt cctcgcagga
     2941 acgatgctgt tctgcggtag cctgtacgcc ttggcgctga cgggtgcgcg ttggctcggc
     3001 gcaatcactc ctctcggtgg gatcgcgttc ctcgcgggtt ggctctgcct gttcctgtct
     3061 gtcggacgaa gccaatagcc aaagaacaac aaggacacga gcatgacggg ggtggggagc
     3121 agttggaacg gcatgggttc ccctcgcagg ctcgggacag gcttcggcag gctctcaggt
     3181 gaagggtggc tgggttgtca gtgagcctgc cggagagccc gtgccgttcc agctgcgcgg
     3241 cggggcggag gtctccccac cccaccagcg gcactggacc agcccctccg gcttcgagtg
     3301 tcagacttcc ccccgcacca cccattacac tcagccgtcg gggctccgtc cagttccgct
     3361 ggccgcccca ccaatcagcg gtgggaagca gaaggggcgg gtatgggttc gaaggcagac
     3421 tcccactcac gcattctcac tctctctaga ccaccggaag aacaacactg cgatcgcagc
     3481 aaacatccag agattccccg ggatccacat cagcaagccg ccgagctgct ggtcgtccag
     3541 cggcgagagc ccccaggtcc ggggcgcggc cacgtaccac gggtacaaca cctcgtccgc
     3601 gaacgtgatc agcgccccca ccacttgcat cggaatcccc accagaaaca gatagaggat
     3661 tcctattccc gggcggagcg gtggcagctc cggcagcgga ctcatgaccg gccaccacat
     3721 cagcgtggcg gtcaccatga acatgagatg ggtggcgatg tgcacctcgt gattccgcat
     3781 catgaggtcg taaaacgggc tcagatgcca ggcggcaatg gagacgctga agaggagcgc
     3841 cgccaaccag ggtcgggtga ggagccgggc cacggccagc acgtcagggc gacgcagcag
     3901 aggccggagc agccaaccgg gtatgcccat cagcagcagc ggtgggaaca gaagggtgag
     3961 caccaggtgc tgcagcatgt ggacggagaa gagatagtag tcgctcagat catgcaacgg
     4021 cccattgagc gagagcagca gaaccaggag tgccgcgcag aacgatgcga cctgccaggg
     4081 tgaggcgggc ggaccgaggt cgagtcgccg gcgcaacggc ccgatcccgt aaaagtacaa
     4141 ggcaccgagg agtccggtgc ccatgagaac gctgggatgc agcgaccagg cccattcata
     4201 tgggagtgtg ggccgtgttc gctcgtccat gttgttggct attggctatt ggcaattggc
     4261 taggggctat cacgcgacac gtgagaaccc attgggccag ggcccatggc ccattcgctc
     4321 accccgaccg ggaaaacgct aaatgatagg acatcagcag aatcagcccg acgatgatta
     4381 ccgcggcgat ggtcagggga aacacgaaaa tgccggtgaa cagcttgcta tcctgcctca
     4441 ggtgcatgta aaacatggcc acgagtgcga acttggcagc cgacagcagg agcagcatcg
     4501 gcacgaagaa tggtttgatg tcctcagcga atgcgccggc gtggttcccg taggtgatct
     4561 cgtagaggcc gacctcgaga gcggtcagaa cgaacaggac caaccccacc ttggcgtaca
     4621 cggccgcgct ggggtgagaa tgctcggacg ggtgtgcggt gctcacgtgg gcgtccatga
     4681 tgccatcgct cacttgatga ggtagacgac tgggaagatg atgatccaga ccacgtccac
     4741 gaaatgccag tacagcgccg ccatctcgag attgagcgat ttggagggtg gaatctttcc
     4801 ccggagcgcc aggatccaga gcgtgatcag ccagatcacg ccgatggtca catgggttcc
     4861 atggaacccc gtcaacgtgt agaagctggc gccgaagagg ttggtggaaa gcttcaggcc
     4921 ttcgtgcacg aagtgggtaa actcgtacac ctgcatcccg acgaagaaca tgccacagaa
     4981 gatggtagca gccagccacc ctaccagcgc cttccggctt ccgcgctgtg caccgctcag
     5041 tgccagcacg acgaagagcg agctgaacag cagcagggcc gtgccaagcg tgaccagcgg
     5101 gatctcgaga atcggcttga agtgctcacc gctgggcgag gtccacggct catgcgggaa
     5161 cggcccgacc aggctgcggc ccttgttgac cacgtagttg gaaatgaggg tcgcgaagaa
     5221 catgcactcg gacccgatga aggtccaaat ggccaccttc cggctgtcta accccgtcga
     5281 ggtcgcatgc tccagcccgt ggggtacctc atgagctacc gccgtcacag atactccctc
     5341 tattagaaac gtgaacagta aacagtaaac agtgaacggg tggattcgtg acgggtcgcc
     5401 ccgttcaccg ttcaccgttc accgtttacg ccgtcctcac cccgccggct cgaaggccca
     5461 ccggtacacg ccgaagaaga gcagcgcgac gcccgccacg atcccccaag gcccgatgtg
     5521 ccccagaagc atgacgccga caaacacggc ggcgacaccg agtgccgcga ctgccggcca
     5581 gtaggaggga ttcggcagat ggatccctgc tccgctcacc ctcgccggtt ccggaagagg
     5641 gccgcggctg gcacgtttgg cttcccagag agcatcacgg ctgtgcacca ccggcgtttc
     5701 cgggaagttg aactcctggg gcggcgaggg aatcgcccac tccagcgtgg cgccgttcca
     5761 ggggtcggcc ggagcgttcg ccggccggcg ccaggcctgg aagacattga ccaggaacac
     5821 gaggaagccg agggccagaa taaacgatcc caccgtttcc agctggttca gcagctcgaa
     5881 tccgagcccg gccggatagg tgtacacccg gcggggcatg ccgctcaggc ccagccagtg
     5941 catggggaag aatgtcaggt tgaacccgat gagcatcagc cagaaatgga tcttgcccag
     6001 ccgctcgtcg agcatgcgcc cgaacatctt gggccaccaa tagtaggctc ccgccgtcag
     6061 cccgaagatg ctccccccga ataggacgta gtggaagtgg gcgaccacaa agtaggtgtc
     6121 cgtctgctgc aggtccgccg ggggtgagga gtgcatcacg ccggagagtc caccgatgat
     6181 gaacatcgcg atgaaggcga ccgcgaagta catcggggtc cggaattgaa gcgacccgcc
     6241 ccacatcgtc ccgatccagt tgaagatctt cacccccgta ggaacggcga tgagcatcgt
     6301 gctgagagcg aagaatgtgt cggcaatcgg tcccatggcg gtggagaaca tgtgatgact
     6361 ccacaccccg aatcccagaa aggcgatgaa gaccccggag aacaccatgg ccgcgtatcc
     6421 gaagagcggc tttcgggaga agaccggcag gacctcggag atgatgccga acgccggcag
     6481 aatgaggatg tagacctcag ggtgcccgaa tatccagaag aagtgctgcc acaggatcgg
     6541 atctccacca cctgccggca cgaagaagtg ggttccgaag aaccgatcga acatgagcag
     6601 gatgagggcg acggtgatga ccgggaacgc caggagcagc agcacctggg tgatgaagct
     6661 catccagacg aacatcggca tgcgcatgag cgtcatcccg ggtgcccgca gattgatgac
     6721 ggtcacgaag aagttgaccg cggcggcgag cgacgcgatg cccaggatct ggaggccgaa
     6781 catccagaag tcgacgttgg gcccgggaga gaattgccgg gaggtcaaat tagcgtagcc
     6841 gaaccatccc tggtccggcg cagcattgaa gaaccagctc gcattcagga acagtccgcc
     6901 cagaaggaac acccaatagc tgaaggcgtt gagccgggga aatgccacgt ccctggcccc
     6961 gatcagcagc gggatcatgt aattgaagaa catcgccgac agcggcatga tggcgaggaa
     7021 gatcatcgtg gtgccgtgca tcgtgaacag ctggttatac cgctccggcg acagaaaagt
     7081 gttatccgga gcgcctagct ggatccgcag caacaacgcc tcgactcctc ccaagaggaa
     7141 gaaaaagaag gccgtggtgc cgtagagtag cccgatgcgc ttgtggtcga cggtggtgat
     7201 ccagctccag accccgctct tctcgccatg ggcggccgcg cgcgcgcgtt gctgatctag
     7261 aactctggtt gccatacgag cctttgtcgg tgttgtaagt gtaggcccgc atcgccatgc
     7321 aggcccacga gtctacttgt gcgcccggag aaacgcagcg agcgccctcg aatcaggctc
     7381 actcacgccg aggttgggca tcagcactcc cttcttgatg ccctgggggt cgcgaatcca
     7441 gtgcgccaga ttctcatccg tgttcttgag ggtgccggcg gcgatgtagg accgggcacc
     7501 gacgttggcc aggttggggc cgaccatccc cttcggagca tttaccgcgt agagcgcatg
     7561 acaggcgacg catcccttgg ccgtgaacag cttctctcct gcggcgtact ggtcgccttg
     7621 cgcctgtggc gatgcaggct gctggatcgt ggctccctgg ctggcggtac gaaccccgct
     7681 atcggcgcgg gcggtggatg cagccttcgg gttcagcgtc tgcatgtggg tcacccaggc
     7741 ttggaaatcc gccggtttct gggcccgaat ccggtagccc atcctgccat gctgaatccc
     7801 acagaactcg gcacactgtc ccggatattc cccgtcgacc tcggccttga accacatccg
     7861 ggactcgcgg gtggcgaaca catcgcgctt ggccgcgaac tggggtaccc agaagctgtg
     7921 gatgacgtcg ttgcttccca tccgtagtgc caccgtccgg ccaaccggca catggatctc
     7981 gttcgcggtt gtcaagttgt attcggggta gcgaaactcc caccaccact ggtgcccgat
     8041 gacttcgatc gtcaacgcac cctgcttggg gaacgagttg gtctgaaaga tggctcgaac
     8101 ggtggggacg gcgatggcgg caaggatgag tgctggaatg acggtccaga tgatctcgac
     8161 cgtggtgttg ccgtgactct gacgcggctc cggatctcct ggtttccccc gaaagcggaa
     8221 gatggcgtaa accagaaccc cttccaccag aacgaacacg aggaccgccc acttgaccgt
     8281 gatatccagc agatcgtcgg caatccgggc aaagtcgccg cgcgggagca acgtggtctg
     8341 cggatagtgc tccgggctac agccggccag cactaacgac agcaggcaga gtgcgctgac
     8401 caagcagaga gggcgccggg gagcggtcct gggggtcatt acgcgctcat cctgtgggta
     8461 agaatcccga gcaaattaga gtgaaagcct gagcaagccg cactttaccc ttcggcttcc
     8521 aaggtgtcaa ggaactccgt gcgccatgat ctgctcgatt tcctccgcag ttcgcggtgc
     8581 cgcgtgagaa aggacttcgt gtccccccgg cgtcaccagc acgtcgtcct cgattcgtat
     8641 gcctacgcgc tccgatggaa ggtagatccc gggctcgacc gtcagaacca ttccgggctc
     8701 gagccgcgcg ccgaacgacc ccacgtcgtg gacgtccatg ccgagccagt gggacaggcc
     8761 gtgagtgaag tagggcacgc acgagtccga cccgcagagg tcacccgagt tgtctcgcag
     8821 gtaggtccgg gctacgcggt tgagtgccgc cagattggtc ccagggcgga ccgagtcgat
     8881 cgcggcctgt tgggttccga gtaccaggtc atacagtgct cgctggcgcg gggtaaagcg
     8941 gcccgagatc gggatcgtcc gggtcatatc ggcgctgtaa taaccgaatt cggcgccgac
     9001 gtcctctacc acgagctcac cagcctgcac ctgccggcgg ttctcgtcgt agtgcaaggt
     9061 gacggcattg gggccggagg ccacgatgct gggaaagccg acccgctccg ctccattccg
     9121 gcgaaacgtg tactcgatga cggcctccag ctcgtactcc cacatgcccg gccgagccac
     9181 cctcatcgat tccttcaggg cttcggccgt gatcgcggtg gcgcggcgaa gccgggtgag
     9241 ctcgtccggg tccttcacca ggcggagccg ggcgatcacc gggtcgaggt cttcgatttt
     9301 tacgggacga aattcagagc cctgttgccg gcgctgggat aggtagaggg cgcccgatcg
     9361 ggctggagag ccggagccca aaaccagctc ccgaatctct gtttcggccc ggtcggccgg
     9421 acggacgtcg gtgattccgg tgagtctgcc cgcctccgct cctggcccaa gcctgggccc
     9481 ggtccattgt tccatggtgc tgtcacgagc cggcaggtaa agaacggcct ggtcccgacc
     9541 ggacttgcgc gcaaccagaa ccagccaggc gccgggcgct tccagtcccg tgagatagaa
     9601 gaaatcattg tgttcccgat agtcgctgtc ctgcgggtag tccccctcga tgctctttac
     9661 cttggctgac gggaggatgg cgaccgcgtt gcccaggcgg gcgaagagcg cggcccggcg
     9721 agcctcgagc tggaccactg gaatcggacc ggcgggagag ccgacctggg cctgggcaga
     9781 agagtggatg gcgaggatga gagctcccca cgttgtcatc ctgagcgtag cgaaggagtc
     9841 aaaacgcagc ttcgactccc tcggtcgctg cgctccctca ggatgacaat tccggccact
     9901 ccgaatcacc gtatcaccat atcaaacggc agcgcccccg ccaccgggta gccgaagtgc
     9961 caccattcct ggtcgtaatt gctgaagccc tccgcctcca tcgcgcgcac caggatctgc
    10021 cggtttcggc gaactcgtcc ttcggcattg gccgtgtgcg cggcttcggc aaacgtgtcg
    10081 aaggccgttc ccatatcgag ctcgacccct gttcccagct ccacaagtgt gaggtccacg
    10141 gccagcccga ggttgtgccg gctgcgccgg gcgatatacc cctgcttcag aaggtcctcc
    10201 cggccggttc gctttgccca gtccaccatg gcgagcgtcg ccctgaccgg acggtatcca
    10261 tcgtagacca ggagaccgag accctcggac cgcagcctgg tctgtacccg ggccagcgca
    10321 acggccgctt cccggcggag caggacccgt ggggcctcgt atcccgggag cggcttacca
    10381 gtgaagttgt tcgaggtggc gtaccgggcg tccacccgaa tggtcgaatc ccgcgatcga
    10441 atgtcgacca ggagcgtttc ggcggccgca tccggtgcaa tcggcagcgg gggggtgttg
    10501 accgaagccg cggcgggcga ggagtccggc ggaggcgggt tctggtggca cgcgaccagc
    10561 agacagaccg ccgccgtcaa ggcaaattgg gcgaacatgg gcccaatata gtaagagctt
    10621 cggcaacatg gctttacagc gagcgactat tccgcccctt gctccggcgt ggtatctttg
    10681 tgacagcgat tcctctacca gcctggagag atctctctcc gggccgactc ctttttacgc
    10741 ctggtcacac cgatgattcg tgaaatgcag gagaagctgg g
//
LOCUS       DASYRV010000452         4325 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_597973, whole genome shotgun sequence.
ACCESSION   DASYRV010000452 DASYRV010000000
VERSION     DASYRV010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4325
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_597973"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..631
                     /locus_tag="VGQ24_12090"
     CDS             <1..631
                     /locus_tag="VGQ24_12090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEV8455629.1"
                     /translation="FFSLLPSHLLPLTSYFATMNRDRALQLMHEYTASDALRKHMYAV
                     EIAMRAMAERAGEDPEAWGVVGLLHDFDYERYPNAAHSPTEEHPAEGVRVLADQGFPE
                     PMQRAILGHANYSGVPRDTPMARALFAVDELAGFLVACALVRPSRSLQDLEVSSVKKK
                     LKDKAFARGVNRDDVIRGAEELGVPLEEHIGFMLEALRPHERTLGLGAP"
     gene            628..2025
                     /locus_tag="VGQ24_12095"
     CDS             628..2025
                     /locus_tag="VGQ24_12095"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HEV8455630.1"
                     /translation="MTAPRLIPAEQSVACAINRAAGGRPVPGNQVHLLIDGPDTYQAM
                     LAVIAQARHWVHFENYIIRSDSAGWRFAELLAKRAREGIHVRVLHDWFGSLGTSRGFW
                     RYLRAAGVEVRPFHRPQFVDVVANISRNHRKLVVADGSRAILGGLCIGCEWTGERNSG
                     GQPWRDTAVDVRGPAAAVLDQTFVNLWEMTGPEVPPGQVAGVVAPEGEAEVRVISGEP
                     GRERAYRVIELLAVGSVERLWITDAYLIAPPRLFQALRDSARDGVDVRLLVPGSSDVP
                     LIRNLTRIGYRDLLRSGVRIYEWDGPMLHAKTIMCDNRWVRIGSSNLNPSSLIGNYEL
                     DVLIEDPGLAHAMEDQFRHDMARSREVASRPVRGPRRVSQALPVALTHQHAEAPTVYR
                     RSRRETRRRAVLLFRAMASNARRSVFGPISAIFIILGLLLVAIPRTSAYVLAAVCAWF
                     ALGAAREAFRRRADR"
     gene            2154..3473
                     /locus_tag="VGQ24_12100"
     CDS             2154..3473
                     /locus_tag="VGQ24_12100"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEV8455631.1"
                     /translation="MVHGRFLIAALLQTSAGVSGVVAQTLSQEGSVTLAEAIRLSDRV
                     QPDVIQATAAVRTAGASRRSAWGAFLPTVSASSSASDFFSEGTSRIDPITGQLTSGNT
                     SNRSLSTSLSANIDLFTGFRRGADLRAARANEEASDASLIDARFQQALTTTNQFLDAL
                     AAAQLLRVRETSVRRAEEQLNTSVAKLRAGSATRSDSLRSLVTLGNAQLDLITTQAQL
                     AAAEANLARMIGESGRVHAIDDSAFYRVQPVIDTQALRVEAESRSPRVRSAAASAAAA
                     RATVSASRSAYWPTLNLAANTGWNGSRADDYNLQNQRQVSLSLRWNLFNGFDRELTIV
                     QRQADLDVAEATASDARRAVQAEVITWVAELDAARARIEITGTSVVAAREDLRVQQER
                     YRLGISTIVDLLTSQEALNQAEVDVVNARFDYLRAKAQLEALIGRNL"
     gene            3470..4228
                     /locus_tag="VGQ24_12105"
     CDS             3470..4228
                     /locus_tag="VGQ24_12105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEV8455632.1"
                     /translation="MTSTLPNTEERMAMLPADVPRDAVIVTRNLQREYDMGGEIVRAL
                     RGVDLMIRKNEFVAVMGPSGSGKSTLMNLIGCLDSPTAGEYWLNGHRVSELEDDELAR
                     IRNKEIGFVFQTFNLLPRATSLHNVELPLVYAGMGGKERRDLAGDALSRVGLSDRMTH
                     RPNELSGGQRQRVAIARALVTRPSILLADEPTGNLDSTTSEEILSLFETLHQEGQTIV
                     IVTHEHDIAEHARRQVHLKDGSVERDFETVGQKP"
BASE COUNT          734 a         1432 c         1412 g          747 t
ORIGIN      
        1 gttcttctcg cttctaccct ctcacctctt acctctcacc tcttactttg cgaccatgaa
       61 tagagaccgc gctctccaac tcatgcacga gtacaccgcc tccgatgcgc ttcggaagca
      121 catgtatgcc gtcgagatcg ccatgcgggc gatggcggaa cgggccggcg aggaccctga
      181 ggcatgggga gtggtgggct tgctgcatga cttcgactac gagcgctacc ccaacgccgc
      241 ccactccccc acggaagaac atccggcaga aggggttcga gtcctggccg accagggctt
      301 ccctgagccg atgcagcggg cgatcctcgg ccacgccaat tacagcggcg ttccccgcga
      361 tacgccgatg gcgcgggctc tgttcgcggt ggacgagctt gccggcttcc tggtggcttg
      421 tgccctggtc cggccatccc gtagccttca ggacctcgaa gtctccagcg tgaagaaaaa
      481 gctcaaggac aaggcgttcg cacggggcgt gaatcgggac gatgtcatcc gcggcgccga
      541 ggagctggga gtccccctcg aagagcatat cgggttcatg ctcgaggcac tcagaccgca
      601 tgagaggacg ctgggcctcg gagcaccgtg acggccccgc gcctgatccc ggcagagcag
      661 tcagtggcgt gcgcgatcaa ccgtgctgct ggcggccgtc cggttcccgg taatcaggtt
      721 catctcctga tcgatgggcc ggacacctac caggccatgc tcgcggtgat tgcccaggcc
      781 cggcactggg tccatttcga gaactacatc atccggagcg actccgccgg gtggcgcttt
      841 gccgagctgc tggccaagcg tgcacgcgag ggaatccacg tccgggtact acacgactgg
      901 ttcggctcgc tggggacgtc acggggtttc tggcgctacc tgcgcgcagc aggcgtggag
      961 gtgcgcccgt ttcaccgccc ccagttcgtc gacgtggtcg ccaacatctc ccgcaatcac
     1021 cggaaactgg tcgtggccga tggctctcgt gcgatcctcg gcggattgtg catcggctgt
     1081 gagtggaccg gagagagaaa ttccgggggt cagccctggc gggacacggc cgtggacgtt
     1141 cgcggccccg ccgcggccgt gctggatcag acattcgtca acctctggga gatgaccggg
     1201 cccgaggtgc cgcccggcca ggtggcgggt gtggttgcgc cggagggtga ggccgaggtg
     1261 cgggttatta gtggcgagcc tggccgggag cgcgcatacc gggtcatcga gctgctcgcc
     1321 gtcggcagcg tggagcggct ctggatcacc gacgcatacc tcatcgcgcc gccacgcctg
     1381 ttccaggccc tgcgggactc ggcccgggac ggcgtcgatg tccggctgct ggtgcccggc
     1441 tcgagtgacg tcccgctgat ccggaatctc acccggatcg gctatcggga cctgctccgc
     1501 agcggggttc ggatctacga gtgggacggt cccatgctgc acgccaagac gatcatgtgc
     1561 gacaaccgct gggtccgtat cgggtcgagc aacctcaatc cctccagcct gatcggaaat
     1621 tacgagctgg acgttctgat cgaggatccg ggactggcgc acgccatgga agaccagttc
     1681 cgccatgaca tggcgcgcag ccgcgaggtg gccagccggc ccgtgcgggg acctcgtcgg
     1741 gtcagccagg ctctcccggt cgcgctgacg caccaacacg ctgaggcgcc gaccgtatat
     1801 cgcaggagca ggcgagagac gcgccggcgt gccgttttgc tgttccgcgc catggcgagt
     1861 aacgcgcggc gctcggtctt tggtccgatc agcgccatat tcatcatcct gggcctgctg
     1921 ctcgttgcca tcccgaggac ctccgcctac gtgctggccg cagtctgcgc ctggttcgcg
     1981 ctcggcgcgg cacgcgaggc gtttcgccgc cgggctgacc gctagagctg cgaccagacc
     2041 ttggccctgg gaatcagacc ttcgagagac ccacgtttct gagtgaaact ttcaggacgg
     2101 ccattcgttc gatgagctgt tcgccgcggt cggaccccct tggagtcgcg cacatggtgc
     2161 atggtcgttt cctgattgcc gcgctgcttc agacgagtgc cggggtttcc ggcgtggtgg
     2221 cgcagaccct gtcccaagaa gggtcggtca ccctggccga ggccataagg ctctcggacc
     2281 gggttcagcc agacgttatc caggccaccg ctgctgtccg gactgccggc gccagccgca
     2341 ggagcgcctg gggggccttc cttcccaccg tgtcggcgag ctcgtcggcc agtgacttct
     2401 tttccgaggg cacctcgcgg atcgatccca tcacgggcca gctcaccagc ggcaacacca
     2461 gcaaccgcag cctcagcacc tccctctctg ccaacatcga tctgttcacc gggttccgcc
     2521 gcggggccga cttgcgggca gcccgcgcga acgaggaagc ctccgatgcg tccctgatcg
     2581 acgcgagatt tcagcaggcg ctgaccacca ccaaccagtt cctcgacgcg ctggcggcgg
     2641 cgcagcttct ccgggttcgg gaaaccagtg tgcgccgggc ggaagaacag ctcaacacct
     2701 cggtcgccaa gctcagagcc ggctctgcta cccgctccga ctccctccgt tccctggtga
     2761 cgttgggcaa tgcccagctc gatttgatca ccactcaggc ccagctggct gcagcggagg
     2821 cgaacctggc gcgaatgatc ggcgagagcg gacgagtgca cgccatcgac gactccgcgt
     2881 tctatcgagt tcagccggtg atcgacaccc aggccttgcg cgttgaagcg gagtccaggt
     2941 cgccccgtgt caggagcgcg gctgccagcg ccgccgccgc gcgggcgacg gtgagtgcct
     3001 cccgctccgc ctactggccg accctcaacc tggccgcgaa caccggctgg aacggcagcc
     3061 gcgccgacga ctacaatttg cagaatcaac gtcaggtgag cttgtccctc cggtggaact
     3121 tattcaacgg cttcgaccgc gagctgacca tcgtgcagcg ccaggccgac ctcgatgtgg
     3181 ccgaggccac cgcctccgat gcgcggcgcg ccgtccaggc cgaggtgatc acctgggtgg
     3241 ccgaattgga cgcagcgcgc gccaggatcg agatcacggg gaccagcgtc gttgcggcgc
     3301 gggaagatct gcgagtgcag caggagcgct atcggctcgg catatcgacc atcgtggacc
     3361 tgcttacctc gcaggaagcc ctcaaccagg cggaggtgga cgtggtgaat gcccgtttcg
     3421 attacctccg cgccaaggcg cagctcgaag cgctgatcgg acggaacttg tgaccagcac
     3481 gctgccgaac accgaagagc ggatggccat gctccccgcc gacgtccccc gggacgcggt
     3541 catcgtcacc cgcaatcttc agcgtgagta cgacatgggt ggcgagatag ttcgtgcgct
     3601 ccgcggcgtg gacctgatga tccgcaagaa tgagttcgtc gcggtcatgg ggccgtcagg
     3661 ctcgggaaaa tccaccctta tgaacctgat cggctgcctc gacagcccga cggcaggcga
     3721 gtactggctg aatgggcatc gggtgtcgga gctggaagac gacgagctgg cccgaatccg
     3781 caacaaggag atcggcttcg tgttccaaac tttcaacctg ctgccgcggg ccaccagcct
     3841 ccacaatgtc gagctgccgc tggtgtacgc cggcatgggt ggcaaggaac ggcgggacct
     3901 ggccggcgac gccctcagcc gagtcggcct gagcgaccgg atgactcacc gacccaacga
     3961 gctgtccggt ggccagcgtc agcgggtggc gatcgcccgg gcgctggtca ctcgacccag
     4021 catccttctg gccgacgagc ctaccggcaa tctcgacagc accacgagtg aggagatcct
     4081 gtcgctgttc gagacgctgc atcaggaagg gcagaccatc gttatcgtga cccatgagca
     4141 cgatatcgca gagcatgcac gtcgccaggt acacctcaag gacggcagcg tggagcggga
     4201 cttcgagacg gtggggcaga aaccatgagc cgagtgccac gtttcggttc cttcgcttcg
     4261 ctcaggatga cagccgcagt tgtctgtctt cttgccgggt gcaaggagga agcagctccg
     4321 gtccc
//
LOCUS       DASYRV010000453         1723 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2799403, whole genome shotgun sequence.
ACCESSION   DASYRV010000453 DASYRV010000000
VERSION     DASYRV010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2799403"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..939)
                     /locus_tag="VGQ24_12110"
     CDS             complement(<1..939)
                     /locus_tag="VGQ24_12110"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEV8455633.1"
                     /translation="MIRAGLLLAGGLAALGLVGSPKERLPTVVPNDNRVPAGRLRGDT
                     LVLDLEVRMARWYPEAPGDSGIAVAVIAEVGKAPQIPAPLIRVPAGTTISATIRNALT
                     DSAITLSGLASHPATSADTLQLRPGQARRLRFAAGAPGTYLYLANLGAHDPEKDPERE
                     SAAGAFVIDPPGGSPPDRVFVINIWGQQTDSVTYPNALAINGRSWPWTERLAASVGDT
                     LRWRWVNASIRNHPMHLHGFYFSLDARGNGLKDSLLPAPRPLAVTHDVRAFETFAMTW
                     VPERPGNWLYHCHIGFHVLPGPATLTPHDTTAHQRMS"
     gene            complement(950..>1723)
                     /locus_tag="VGQ24_12115"
     CDS             complement(950..>1723)
                     /locus_tag="VGQ24_12115"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEV8455634.1"
                     /translation="AGLTVDGWMIRPRDFDSTRTYPVLVHVYGEPAGQTVADAWSGSG
                     RLWHQAIADQGYLVVSFDNRGTPAPRGRAWRKVVYGVVGVTSSREQAEAVRALARARP
                     YLDSTRVGIWGWSGGGSSTLQALFRYPEVYQVGMSVAPVPDESLYDTIYQERYMGLPT
                     TNAEAYRLASAINVAEGLRGKLLIVHGSGDDNVHYQGSERLVNRLIRLGKSFDFMTYP
                     NRSHCVCEGPGTTLHIYSLLTRYLLEHLPAGPRGISTQQ"
BASE COUNT          278 a          563 c          615 g          267 t
ORIGIN      
        1 cgacatccgc tggtgagcgg tagtgtcgtg cggtgtcagg gtggcgggac ccggcagcac
       61 gtggaaaccg atgtggcagt gatagagcca gttgccgggc cgctcgggga cccaggtcat
      121 ggcaaaggtc tcgaacgcgc ggacgtcgtg ggtgaccgcc agcggccggg gcgcggggag
      181 gaggctgtcc ttcaggccgt tgccacgggc atcgaggctg aagtagaacc cgtgcaggtg
      241 catcggatga ttgcgaatcg aggcgttcac ccagcgccag cgcaacgtgt ctccgacgct
      301 ggccgcgagc cgttcggtcc agggccagga gcgcccgttg atggccagcg cattgggata
      361 ggtgacggag tcggtctgct gtccccagat gttgatgacg aacacgcggt ccggcggcga
      421 gccgccgggc ggatcgatca cgaacgcgcc ggcggcggat tcccgctcgg ggtccttttc
      481 cgggtcatgc gctcccaaat tcgcgagata gaggtaggtg ccgggcgcgc ccgcagcaaa
      541 gcgcagccgc cgcgcctgtc ccggacgcag ctgcagcgta tcggcactgg tcgccggatg
      601 actcgcgagc ccgctcaggg tgatcgccga gtcggtcagc gcgttgcgaa tcgtggcgct
      661 gatggtggtg cccgcgggga cccggatcag cggagcgggg atctgcggcg ctttgccgac
      721 ttccgcgatc accgccaccg cgatgccgct atcgcccggg gcttctgggt accagcgcgc
      781 catgcggact tcgagatcga ggacgagcgt gtcaccacgg agccggccgg ccgggacccg
      841 gttgtcattg ggcacgaccg tcggcaacct ctccttcggg gagccgacca agcccaacgc
      901 ggccagtcct ccggccagca gcagcccggc acgtatcacg cgaccgtcct cactgttgag
      961 tcgagatgcc ccgcggtccc gcggggaggt gctccagaag atagcgggtt aacagcgagt
     1021 agatatgcag cgtggtcccg ggtccctcgc agacgcaatg gctgcgattg ggataggtca
     1081 tgaagtcgaa gctcttgccg agccggatca ggcggttcac cagccgctcg gagccctggt
     1141 agtgcacgtt gtcgtcgccg gagccgtgca cgatcagcag cttgccgcgc aagccttccg
     1201 cgacgttgat cgcggaggcg agccggtagg cctccgcgtt cgtcgtgggg aggcccatgt
     1261 aacgttcctg atagatcgtg tcgtacaggc tttcgtccgg aaccggcgcc acggacatgc
     1321 ccacctggta gacctcgggg tagcggaaca gcgcctgcag cgtactggag ccgcctccgc
     1381 tccaacccca gatgcccacc cgggtcgagt cgagatacgg ccgggcccgc gccagcgcac
     1441 ggaccgcctc ggcctgctcc cggctggagg tcactcccac gacgccatac accaccttgc
     1501 gccaggcgcg cccgcggggt gcgggggtgc cccgattatc gaagctgacg acgaggtagc
     1561 cctgatcggc gatggcctgg tgccagagtc tgccggagcc ggaccaggca tccgccacgg
     1621 tctgccccgc gggctcgccg tagacgtgca ccagcacagg ataggtcctg gtggagtcga
     1681 agtcccgggg acggatcatc cagccgtcga ccgtgagccc ggc
//
LOCUS       DASYRV010000454         3239 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_185390, whole genome shotgun sequence.
ACCESSION   DASYRV010000454 DASYRV010000000
VERSION     DASYRV010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3239
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185390"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..185
                     /locus_tag="VGQ24_12120"
     CDS             <1..185
                     /locus_tag="VGQ24_12120"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEV8455635.1"
                     /translation="ENGPLAVRACLETVDAGLDMAVDQALLLEANQFGLLSATADMRE
                     GTKAFVEKRKAAFKGV"
     gene            225..668
                     /locus_tag="VGQ24_12125"
     CDS             225..668
                     /locus_tag="VGQ24_12125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455636.1"
                     /translation="MPKKAKPGRIFASRGRRQAWLAAMLVVLAAACQERDRLTFPEPG
                     DGIGPVTTIDQPNGSDTTVDAGADFFVNGRTVDPDGVDTVYFLVIGGNQNFNPFRPSP
                     PADTVRWGLPLSTTGRSGSTITVQIHGVDLQGNQGAPSTRQVIVR"
     gene            668..1741
                     /gene="recF"
                     /locus_tag="VGQ24_12130"
     CDS             668..1741
                     /gene="recF"
                     /locus_tag="VGQ24_12130"
                     /inference="COORDINATES: protein motif:HMM:TIGR00611.1"
                     /note="All proteins in this family for which functions are
                     known are DNA-binding proteins that assist the
                     filamentation of RecA onto DNA for the initiation of
                     recombination or recombinational repair; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication and repair protein RecF"
                     /protein_id="HEV8455637.1"
                     /translation="MRLERLVTRGYRNLADLDWEPPAAGAAILGSNAQGKTNLLEAIY
                     YPVLFRSFRGSPDQQVMRASPGFHVEAHIAGAGAGTVAVTYAGRKKRITVDGDEAGRS
                     ADVVGTWLAVAFLPADLGLASGPAVERRGYLDRLLSLADRGYLRSLARYRAALAQRNS
                     ALRQDSTDVAHAFAGVLATSGADLVRRRLEWVSGAADQFAGEFECLGEEGRATLEYRG
                     RTDLADASAWEAALAGVLRDDRARGMTTVGPHRDDLVLEIGGRRLRDYGSTGQQRSAA
                     VALKLIEIAALREACSTEPVLLLDDVFAELDRERQTRLARRLLGPGERQVFVTSPRPD
                     ELPPNLGLPVWVVEGGRIRSVSS"
     gene            1835..2140
                     /locus_tag="VGQ24_12135"
     CDS             1835..2140
                     /locus_tag="VGQ24_12135"
                     /inference="COORDINATES: protein motif:HMM:NF017103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HEV8455638.1"
                     /translation="MTKKIVPVPLSEALTSYFKQAGLTKRVQQAGIIEEWAELVGPQI
                     ARVTEPDSITPDGVLRVRVATAAWANELSLMSPRILARLNGGRAGRVKEIRWMPGQL"
     gene            2209..>3239
                     /locus_tag="VGQ24_12140"
     CDS             2209..>3239
                     /locus_tag="VGQ24_12140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEV8455639.1"
                     /translation="MAKEPSAVLDGNIEYKAESIQVLKGLDAVRRRPGMYIGSTSENG
                     LHHLVYEVVDNSIDEALAGFCDVISVTIHADNSITVSDNGRGIPVDMHPTEKKPAVEV
                     ALTVLHAGGKFDKSSYKVSGGLHGVGVSVVNALSERLEVLVDRDGQRHHMAFVRGKTV
                     KKLTVLGKAKGRGTTVRFKPDPEIFTVLEFHYTTLADRLRQLAFLNRGVSISIKDERE
                     QPAKAETFLAKGGLIQFVEWLNRNKKPLHPKPIAFTAVKDDVDVDVALQYEDGYNENT
                     FTFVNNINTHEGGTHLTGFKSALTRTINEIAKKGSLKKEDFTLSGEDIREGLTCVLHV
                     KVKEPQFEG"
BASE COUNT          603 a          980 c         1118 g          538 t
ORIGIN      
        1 tggagaacgg accgttggcg gtccgtgcct gcctggaaac ggtggacgcg gggctcgata
       61 tggccgtgga ccaggcgctg ttgctcgagg ccaaccagtt cgggctgctg tccgccactg
      121 ccgacatgcg ggagggcacg aaggccttcg tggagaagag gaaggctgca ttcaagggag
      181 tgtaggacct gcaaatttat cagcctaccg actatttttt agggatgccg aagaaggcga
      241 agccggggcg aatcttcgcc tctcggggcc ggaggcaggc ctggcttgcc gctatgttgg
      301 tcgtgctcgc cgcggcgtgt caggagcggg atcgcctcac gtttcccgaa ccgggcgatg
      361 gcattgggcc ggtcaccacg atcgaccagc ccaacgggag cgacactacc gtggatgccg
      421 gcgccgactt ctttgtaaac ggtcgcacgg tggaccccga cggcgtcgat accgtctatt
      481 tcttggtcat cggtgggaac cagaatttca acccattccg gcccagtccg ccggccgata
      541 cggttcggtg gggactaccg ctcagcacca ctgggcgctc gggctcaacc atcaccgtgc
      601 agatccacgg cgtcgacctt cagggtaacc agggcgcccc ttcgacccgc caggtcatcg
      661 tgcgatagtg cggcttgagc ggctggtgac ccggggatac cgaaacctcg ccgatctgga
      721 ttgggagccc ccggcagccg gcgcggccat tctggggtcg aacgcccagg ggaagaccaa
      781 tctcctggag gcgatctact acccggtgct gtttcgttcc ttccggggat cgcctgatca
      841 gcaggtgatg cgggcaagtc cgggctttca cgtcgaggcc cacatcgccg gagccggcgc
      901 tgggacggtc gccgtgacct atgccgggcg caagaagcgg atcaccgtcg atggagacga
      961 ggccgggcga tcggccgatg tggtggggac ctggctggcg gtggcgtttc tgcctgccga
     1021 cctgggactc gcctcgggac ctgccgtgga gcggcgggga tatctcgacc ggttgctgtc
     1081 gctggccgac cgcgggtacc tgagatcgct cgcccgatat cgggcggccc tggcccagcg
     1141 caacagcgcc ctccgccagg acagcaccga cgtggcccat gcctttgccg gcgtgcttgc
     1201 tacgtcaggg gccgacctgg tccggcggcg gctcgaatgg gtgagcggtg ccgcggacca
     1261 gtttgccggt gaattcgagt gcctgggcga ggaaggccgc gcgaccctgg agtaccgcgg
     1321 ccgcaccgac ctggccgacg ccagtgcgtg ggaagcagcg ctggcagggg tgcttcgcga
     1381 cgatcgagca cgcggaatga ccacggtggg tccgcaccgc gacgacctgg tgctcgagat
     1441 cggtggccgc cggctgcgcg attatggttc caccggtcag caacgcagcg cagcggtcgc
     1501 cctgaagctg atcgagatcg ccgcgctccg ggaagcgtgc agtaccgagc cggtgctgtt
     1561 gctggacgat gtattcgccg agctcgaccg ggagcggcag acccggttgg cgcggcgcct
     1621 cctcggcccg ggagagcgcc aggtgttcgt gaccagcccg cgaccggacg agctgccgcc
     1681 gaatctgggg ctgccggtgt gggtggtgga gggtgggagg attaggtcgg tgtcatcctg
     1741 agcctgcttg tcatcctgag cgaagcgaag gatccctcag agtacgcgcg gagagatcct
     1801 tcgctacgct caggatgaca aatcgcagag agctatgacc aagaagattg tccctgttcc
     1861 tctctccgag gccctcacca gctacttcaa gcaggcgggg ctgaccaagc gagtgcagca
     1921 ggcggggatc atcgaggaat gggcggagct ggtagggccg cagatcgcca gggtcaccga
     1981 gcccgactcg attactcccg acggcgtgct tcgggttcgc gtcgccacgg cggcgtgggc
     2041 caatgagctg agtttgatgt cgcccaggat tctggcccgg ctcaacggcg gccgtgccgg
     2101 acgagtgaag gagatccgct ggatgccggg tcagctatga ggggctatta gccagtagcc
     2161 agtaactacg agctacgtgg cacagggagc ggctaaccaa caggagccat ggccaaagaa
     2221 ccgagcgccg tcctggacgg caatatcgag tacaaagcag agtccattca ggtcctcaaa
     2281 ggcctggacg cggtccgccg gcggcccggc atgtatatcg ggtcgaccag cgagaacggc
     2341 ttgcaccacc tcgtttatga ggtagtggac aactcgatcg acgaagctct cgccggcttc
     2401 tgtgacgtca tcagcgtgac catccatgcc gacaactcca tcaccgtcag cgacaatggt
     2461 cgggggattc cggtggacat gcacccgacc gagaagaagc cggcagtgga agtggcgctc
     2521 acggtcctgc atgccggcgg caagttcgac aagagcagct acaaggtgtc gggcgggctt
     2581 cacggtgtgg gcgtctcggt ggtgaacgcg ctcagcgaac ggctggaggt cctggtcgat
     2641 cgcgacggcc agcggcacca catggccttc gtacggggca agacggtgaa aaagctcacg
     2701 gtgctcggca aggccaaggg acggggcacg acggtgcggt tcaagccgga cccggagatc
     2761 ttcaccgtcc ttgagttcca ctacacgacc ctggccgacc ggctgcggca gctcgcattc
     2821 ctgaaccgcg gcgtgtcgat cagcatcaag gacgagcggg agcagccggc caaggcggag
     2881 acgttcctgg ccaaaggcgg cctcattcag ttcgtcgagt ggctcaatcg caacaagaag
     2941 ccgctgcacc cgaagccgat cgcctttacg gcggtcaagg acgacgtgga cgtggacgtc
     3001 gcgcttcagt atgaggacgg gtacaacgag aacaccttca ccttcgtgaa caatatcaat
     3061 acccatgagg gcgggaccca tctcaccggg ttcaagtcgg ccctgacccg cacgatcaac
     3121 gagatcgcca agaagggctc gctcaaaaag gaagatttca ccctgagcgg cgaggacatt
     3181 cgggaggggc tcacctgcgt gctgcacgtc aaggtcaagg agccgcagtt cgaggggca
//
LOCUS       DASYRV010000455         6439 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3212047, whole genome shotgun sequence.
ACCESSION   DASYRV010000455 DASYRV010000000
VERSION     DASYRV010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6439)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6439)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6439
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3212047"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1112)
                     /locus_tag="VGQ24_12145"
     CDS             complement(<1..1112)
                     /locus_tag="VGQ24_12145"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8455640.1"
                     /translation="MRIHVPNVMEGVAIALGAMRANKLRSALTILGVVIGVATVMTVA
                     SMVQGIRSQIVNAIEVAGPQVFYILRFFTQTPMDPDRLPYELRIRPILQARDANAVRS
                     VPQIGYAELWLQIFTRLEVAGARTQTMLMYAGDDRFMEILGGTLLRGRLFTRAELTGE
                     NVIVLEEQAADRLFGQLDPLGQLVRANGQPLRVIGIYQKATNIFEPPGQQNAGAIPFR
                     TGRERFRYNESYDLFIAVKAREGVPIPIAKDAVTSALRRARGLRPGTPNTFDLVTQDQ
                     ILDVLGNLTNYFFLAMVALSSVALMVGGIGVMAIMMVSVTDRTREIGLRKAIGATRGE
                     ILWQFLVEAATLTLLGGLIGIVVGLAAGEVMKYAMA"
     gene            complement(1120..2364)
                     /locus_tag="VGQ24_12150"
     CDS             complement(1120..2364)
                     /locus_tag="VGQ24_12150"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8455641.1"
                     /translation="MPFLEALRLALQTIWHSKLRSFFTLLGIIVSVAFLVLVVAIIQG
                     MNAYVKENLTGAMIGTNAFQVRRTPISIGLLDDDQVRAISKRPRITVRDADVVEQAVP
                     DAQAVSLQSGWPTPVSSVSYRNRLVENVVVFGVTPPYQVVQDYHFAAGAPLADPDERE
                     RRDVVVVGYDVADRLFGDPLTAIGRKVRVAGRELQVKGVIARKGRVLGQSFDTFILLP
                     FATFESMYGRRKTTVVSVKMRSAEAIDDAMVRAEEAMRLAHRLRPGEENDFTVDKADA
                     LVAFWRSLTRILFTAIPAVVCIGIVVGGIVIMNIMLMTVNERVHEIGIRKSVGATRGD
                     IRRQFLVEAVVLASLGGVLGVGLGWGVATVVASISPLPARVTLWSVAAALALGAGAGV
                     LFGVYPAARAARLDPINALRAE"
     gene            complement(2530..3756)
                     /locus_tag="VGQ24_12155"
     CDS             complement(2530..3756)
                     /locus_tag="VGQ24_12155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8455642.1"
                     /translation="MLEGSVIALDSIRANKVRAALTILGVAIGVTVVIAMASAITGIN
                     QSITHILESAGPKTFFVQRYFSGGLNVSDGSDEMSPWRRMPWITVEEAELIRTLPAVR
                     DVNIGEYTNGPVSYEGVELKSVAMAGMSPSWNLVNGGDILAGRNFTPMEYAAGARVAI
                     INDKVAESLFPRRDPVGKRIKIFGQPFNVVGLHAEAASLFSNADEPRLAIPHTAFTKV
                     TDYEKGWMEIAVLPTEAATVQQAQDEVTTALRTRRGLRPGQPDNFAIVTQDRVLDTFN
                     KITAAFFVVMIALSSVGLMVGGVGVVAIMMISVTERTREIGVRKALGATRREIMFQFL
                     VEAATLTLVGCIVGMAAGALIAWGIRSFTPIPATVPLISVVAAVVAAILTGVLFGLYP
                     ASKASRLDPVEALRYE"
     gene            complement(3789..5030)
                     /locus_tag="VGQ24_12160"
     CDS             complement(3789..5030)
                     /locus_tag="VGQ24_12160"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8455643.1"
                     /translation="MRLLEAVRMALRAIRGQKLKSFFSLVGVLIGVTFLIAVVSIVQG
                     MNRYMVERFANTLVGANTFELRQRPSITSGNIPDDVWLAWRRRPRISYSDADYVRERI
                     RVPATFAKFCEDRVAVHYGGKIARDIRLVGTEESYFKIRHYEIAVGRAFTAQEVRTAL
                     PVVVIGHELADKLLKEVDPIDKVVVIGGLPYRVIGVVAKQGTLFGISLDKIAIMPFSA
                     QGRRLICPINILDALIVQTADPTSMQLAMAESEALMRSRRHLKPWQENNFAFQTAEGA
                     LGSWQKISRVLFLALPGLVAISLVVGGIVIMNIMLMAVSERTREIGIRKALGARRRDI
                     LAQFVVESATLSAVGALLGIALGIALAFVVKAATPLPAAVAPWSILVGVLLGVSVGIA
                     AGVYPASRASRLDPIVALRAE"
     gene            complement(5030..6310)
                     /locus_tag="VGQ24_12165"
     CDS             complement(5030..6310)
                     /locus_tag="VGQ24_12165"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEV8455644.1"
                     /translation="MSRRTKIGVIIALVALVAAGVVAFRINKKKNAATEVRLEQVTRR
                     DLVSAVTASGKIEAKTSVDISADITGRIIQIAVREGDMVKRGQFLLQIDPAQYQAAVA
                     RAQGIVASNEAVLLQTRASRDQAQRAWNRARQLTELGDNLIAPETAEQAKTALEVAEA
                     NYQSTKAQLDQARAGLQEARDNLAKTHLTAPITGRVVRLAVEEGEVAVPGTFSRETGL
                     LMTIADLSIILAKVQVDETDIVRLTQRDSAEITIDAYPDTTFTGRVTKVSHSAKLTPT
                     ETASGSSDRAVDFDVEITLQTPPPDIRPDLSCTARVVTDTRNNALSIPIIALTVRGHE
                     KVPNELDSAPPIDTLRARFRKKEAEGVFVVRNGAATFRPVKTGVAGDEYFEVIEGVRE
                     GETIVAGTYQAIRDLKDGAKVRAADTTKTREVKS"
BASE COUNT         1142 a         2107 c         2046 g         1144 t
ORIGIN      
        1 atcgccatcg cgtacttcat cacctcaccc gcggccaagc cgacaacgat cccgatcagc
       61 ccgccgagca gcgtgagtgt ggccgcctcg accaggaact gccagaggat ctcaccccgg
      121 gtggcgccga tcgccttgcg gaggccgatc tcccgggtgc ggtccgtgac cgagaccatc
      181 atgatcgcca tgaccccgat gcctccgacc atgagggcca cgctcgagag cgcaaccatc
      241 gccagaaaga agtaattggt gagattcccc agcacgtcca gaatctgatc ctgggtgacg
      301 aggtcgaatg tgttcggggt tcccggtctg aggccgcggg cccggcgcag agccgacgtc
      361 acggcatcct tggcgatcgg gatcggtact ccctctctgg ccttcaccgc gatgaagagg
      421 tcgtagctct cgttgtagcg gaaccgctcc cgaccggtcc ggaagggaat ggcacccgcg
      481 ttctgttggc ccggcggctc gaagatattg gttgccttct gatagatccc gattacccgg
      541 agcggctggc cgttggcccg aacgagctga ccgagcgggt cgagctggcc gaagagccgg
      601 tccgcggcct gttcctccag cacgatgaca ttctcacccg tgagctccgc ccgggtgaag
      661 agccgtcccc gaagcagggt gccacccagt atctccatga agcgatcgtc gcctgcgtac
      721 atcagcatcg tctgggttct cgcgccggcc acctcgaggc gggtaaagat ctgcagccag
      781 agctcggcgt agccgatctg aggaacgctt cgcaccgcat tcgcgtcgcg agcctggagg
      841 atcggccgga tccggagctc gtacggcaga cggtccggat ccatgggagt ctgggtgaag
      901 aagcggagga tgtagaagac ttggggcccg gctacctcga tggcattgac gatttgagac
      961 cggatgcctt gcaccatgga ggcaactgtc atgactgtcg cgaccccgat caccacgccc
     1021 aggatcgtca gcgccgagcg aagcttgttg gcccgcatcg caccgagcgc gatcgcgact
     1081 ccttccatca cgttgggaac gtggattcgc atcggcgacc tattcggcac gcaaggcgtt
     1141 gatcgggtct aaccgggcgg cccgggcggc tggatagact ccgaagagca cgcctgcgcc
     1201 tgccccgagc gccaaggcgg ccgcgacgga ccagagagtc acccgcgcgg gcagcgggct
     1261 gatgctcgcc acgactgtcg ccacgcccca gccaagaccc acgccgagga cgccgccgag
     1321 tgaggcgagg actacagctt cgaccagaaa ctgccggcgg atgtctcccc gcgtggctcc
     1381 cactgatttt cggatgccga tctcgtgcac ccgttcgttc accgtcatca gcatgatgtt
     1441 catgatgacg atgccaccga ccacgatccc gatgcagacg acggcgggta tggccgtgaa
     1501 gagtatccgg gtcaggctgc gccagaaggc caccaatgca tcggccttgt ctacagtgaa
     1561 atcgttctcc tcgcccggcc ggagccggtg ggccagccgc atcgcctcct cggcacggac
     1621 catggcatca tcgatcgcct cggcggaccg catcttgacc gacaccaccg tcgtcttcct
     1681 tctgccatac atcgattcga aggtggcgaa cggcagcagg atgaaggtat cgaaggattg
     1741 gcccaggacc cggcccttcc tcgcgatcac tcccttcacc tggagctcgc ggccggccac
     1801 ccgcaccttc cggccgatgg ccgtgagagg atcgccaaac agccggtcgg ccacgtcgta
     1861 acccaccaca accacgtccc gtcgctcgcg ttcgtcaggg tcggccaacg gcgcgcctgc
     1921 ggcgaagtgg tagtcttgca ccacctggta gggcggagtc actccgaaca ccaccacgtt
     1981 ttcgaccagc cggttgcggt agctcacgga gcttaccggg gtgggccacc ccgattggag
     2041 cgagaccgct tgagcatcgg gcaccgcctg ctccactaca tcggcatccc gcacggtgat
     2101 ccggggtcgt ttgctgatcg cacgcacctg atcgtcgtcc agcaggccga tgctgatcgg
     2161 tgtccggcgg acctggaagg cattggtgcc gatcatcgcg ccggtcaggt tctccttgac
     2221 gtaggcgttc atgccctgga tgatggcgac gaccaacacc agaaaggcga cgctgacgat
     2281 gatgccgagg agggtaaaaa aggagcgaag cttgctatgc cagatggtct ggagggctag
     2341 acggagtgct tctaaaaagg gcatttgtaa aaagtaagcg gtgagcggtg agcggtaagc
     2401 ggggcagcgg gaaggggaag ggtgaggggc tacggtgtca gcactcgcgc gtcatcccga
     2461 gcggagcgag ggatcgtcta tcgtgtcgtc tggtcgagat cgcggtgaca acgtaaaccc
     2521 ggccgatcct cactcatacc tcaacgcttc gactggatcc agccgcgagg ccttgctggc
     2581 cgggtacaag ccgaacagca cgccggtcag gatggcggcg accacggccg cgaccaccga
     2641 aatgagcgga acggtggcgg ggatcggggt aaacgagcgt atgccccagg cgatcagcgc
     2701 gcccgctgcc atgcccacga tgcaaccgac cagtgttaac gtggcagctt ccacgaggaa
     2761 ctgaaacatg atctcgcggc gggtggcgcc gagcgccttc cggaccccga tctcccgggt
     2821 ccgctcggtc accgagatca tcatgatcgc gaccacgccg actccgccca ccatgagccc
     2881 gacgctggat agggcgatca tgaccacaaa gaaggccgcg gtgatcttgt tgaaggtgtc
     2941 gagcacccga tcctgggtca cgatggcaaa gttgtccggc tggccgggcc gcaggccgcg
     3001 cctggtccgg agcgcggtgg tcacctcgtc ctgggcctgc tgcacggtag cggcttcagt
     3061 cgggaggacc gcgatctcca tccaaccctt ctcgtagtcc gtcaccttag taaaggcggt
     3121 atgcggaatc gccaggcggg gctcgtcggc attgctgaag agggaggccg cttcggcatg
     3181 cagcccgacg acgttgaacg gctggccaaa gatcttgatg cgtttcccga ccggatcccg
     3241 gcggggaaac agcgactcgg ccactttgtc attaatgatc gcgaccctgg cgcccgccgc
     3301 atactccatg ggagtaaagt tgcgccccgc caggatgtcg cccccattga ccaaattcca
     3361 gctcggactc atccccgcca tcgcgacact cttcaactcc acgccttcat aacttaccgg
     3421 gccgttggtg tactctccga tgttcacatc gcgaacggcg ggcaaggtgc ggataagttc
     3481 tgcttcctca accgtgatcc acggcatcct ccgccagggc gacatctcgt ccgacccatc
     3541 ggagacattg agcccgcccg agaagtaacg ctggacaaag aacgtcttgg gtccggccga
     3601 ctccagaatg tgggtgatgc tctgattgat cccggtgatc gccgaagcca tggcaatcac
     3661 cacggtgacg ccgatggcga ctcccaggat ggtcagcgca gcccggacct tattggcccg
     3721 gatggagtcc agcgcgatga cggatccttc gagcatgcgc gatccgaggc tgcccctccg
     3781 gatcggactc actcggccct caaggccacg atgggatcga gccgggaggc gcggctcgcc
     3841 gggtacactc cggccgcgat gccaacgctt accccaagca gcaccccgac caggatggac
     3901 cagggggcca cggccgccgg aagcggggtc gctgccttga ccacaaacgc gagggcgatg
     3961 ccgagggcga tgccgagcaa cgcgcccacg gctgacagcg tggcggactc gaccacgaac
     4021 tgcgccagaa tgtctcgccg gcgcgcgccg agcgccttgc ggatcccgat ctcgcgggtg
     4081 cgttcgctca ccgccatgag catgatgttc atgatgacga tgccgcccac caccagcgag
     4141 atcgccacca gccccggcaa ggcgaggaac agcaccctcg agatcttctg ccagctcccc
     4201 agcgcgccct cggccgtctg aaaggcaaaa ttgttctcct gccagggctt caggtgccgg
     4261 cggctccgca tcagtgcctc cgactccgcc atcgcgagct gcatgctcgt tgggtcggcg
     4321 gtctgcacga tgagggcgtc gaggatgttg atcgggcaga tcaggcgccg gccctgagcg
     4381 ctgaacggca tgatggcgat cttgtcgagc gagatcccga agagggtgcc ctgcttggcc
     4441 acgactccaa tcacccggta ggggaggcct ccgatcacga cgaccttgtc gatggggtcg
     4501 acctctttga gaagcttgtc tgccagctcg tgcccgatga ccacgaccgg gagggcggtc
     4561 cgaacttctt gtgcggtgaa cgctcgtcca accgcgatct cgtagtgcct gatcttgaaa
     4621 tagctctcct cggtgcccac cagcctgatg tcccgggcta tcttgccgcc gtagtgcacc
     4681 gccacccgat cctcgcagaa cttggcaaac gtcgccggca cccggattcg ctcccgaacg
     4741 tagtcggcgt cgctgtagct gattcggggg cgtcgacgcc aggccagcca gacgtcatcc
     4801 ggtatgttcc cggacgtgat actcggccgt tggcgcaact cgaaggtgtt ggcgcccacc
     4861 agcgtgttgg cgaaccgctc gaccatgtac cggttcatgc cttgtacgat cgacaccacc
     4921 gcgatcagga acgtcacgcc gatcagcacg cctaccagtg agaagaagct cttgagcttc
     4981 tgcccgcgga tagcccggag cgccatccgg acggcctcga gcagccgcac taggacttca
     5041 cttcccgggt cttggtggta tctgccgcac gcaccttggc gccatccttg aggtcgcgga
     5101 tcgcctggta ggtgccggcc acgatggttt caccttcgcg caccccctcg attacctcga
     5161 agtactcgtc gccggctacg ccggtcttga cggggcggaa ggtcgccgcg ccgttgcgga
     5221 cgacgaagac accctccgcc tccttcttcc ggaagcgggc gcgcagggtg tcgatcggcg
     5281 gcgccgagtc caactcgttg gggaccttct cgtggccgcg cacggtgagc gcgatgatcg
     5341 ggatgctcag ggcgttgttt cgggtatcgg tcacgacgcg cgcggtgcag ctgagatcgg
     5401 gccggatgtc gggcggaggc gtctggagcg tgatctcgac gtcgaagtcc accgcccggt
     5461 cactcgagcc ggaggcggtc tcggtgggag tgagtttcgc gctgtggctc actttggtga
     5521 ctcggccggt gaacgtcgtg tccgggtagg catcgatggt gatctcggcg gagtcacgct
     5581 gagtcagccg cacgatatcg gtctcgtcga cttgcacctt tgccaggatg atggaaaggt
     5641 cggcgatggt catgaggagt cccgtctccc gggagaatgt gcccggcacc gccacctctc
     5701 cctcttccac tgccagacgg acgacgcgac ccgtaatcgg agcagtcaag tgagtcttcg
     5761 ccagattgtc tcgtgcctcc tgaaggccgg cccgggcctg gtccagctgc gccttggttg
     5821 actggtagtt cgcctccgcg acctccaggg cggtcttggc ctgctcggct gtctccggcg
     5881 caatgaggtt gtcacccagc tcggtgagct ggcgggcccg gttccaggct cgctgcgcct
     5941 ggtcccggct ggcccgggtc tggagcagga cggcctcatt cgacgcgacg atgccctggg
     6001 cccgcgccac cgccgcctgg tactgggccg gatcgatctg gagcaggaac tggcctcgtt
     6061 tgaccatgtc cccctcgcgt acggcgatct ggatgattcg accggtgata tcggcgctga
     6121 tgtcgaccga tgtcttcgcc tcgatcttcc cgctggcggt gaccgcgctg accaggtccc
     6181 gccgggtcac ctgctccagc cggacctcgg tggccgcgtt cttcttcttg ttgattcgga
     6241 acgcgaccac accggcggca acgagcgcga cgagcgctat gatcacaccg atcttcgtcc
     6301 gacgcgacat gtccgttcct cgttagcgga gagagcggcc gatggcggct tcgagcgcaa
     6361 ccatggcctt gtggtaatcg tagaccgcat tgatgtaatc gccttcggcc cgctgaaccg
     6421 cgttctgagc gtccgagac
//
LOCUS       DASYRV010000456         9462 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3421551, whole genome shotgun sequence.
ACCESSION   DASYRV010000456 DASYRV010000000
VERSION     DASYRV010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9462
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3421551"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..363
                     /locus_tag="VGQ24_12170"
     CDS             <1..363
                     /locus_tag="VGQ24_12170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HEV8455645.1"
                     /translation="VCHSKTVSVALKAAEQLAKDGVNAEVLDLRTIRPLDTGAVLSSV
                     AKTHRCVVVEEGWPFAGVGAQVVDTIQREAFDELDAPIIRVTSADVPMPYNKQLEKAA
                     KADPGKVVSAVNQVLYRE"
     gene            492..1814
                     /locus_tag="VGQ24_12175"
     CDS             492..1814
                     /locus_tag="VGQ24_12175"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HEV8455646.1"
                     /translation="MTTKVVMEALSPTMEEGRLVEWKKQEGEPVAVGDVLAEVETDKA
                     VMELVARAGGTMLKHIVEAGATVPVSELVAVIGEPGDDVSGEAGQTGSGAAGQRGGTE
                     SQATQPSPGENRPVSMPAAAPSVREGNGARSAPSAPAPAAQAGSRVKASPLARRIAAE
                     RGVDLVGVTGSGPEGRVVARDLETAALAASPRSGTAPTITAPPPRRAAAPLGSPASAP
                     YTDVPLTQIRKTIARRLAQSIGPVPTFYLTTEVDMERVWEARGALSAEPKVSFNDIVI
                     KSVAMALRQHPACNAWWQDDHIRYWNEVHVGMAVAVEDGLITPVIRYADVKTLRQIAG
                     ESRDLAGRARERRLRPEEYTGATFSISNLGMLDIDEFTAVINPPEAGILAVGRIVEKP
                     VAHEGVVAVRRRMRLTMSCDHRVIDGATGAEFLKTLNTMLENPLALVW"
     gene            1903..3300
                     /gene="lpdA"
                     /locus_tag="VGQ24_12180"
     CDS             1903..3300
                     /gene="lpdA"
                     /locus_tag="VGQ24_12180"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEV8455647.1"
                     /translation="MANQFDVIIVGGGPAGYVCAIRAAQLGLATAVVERDKLGGVCVN
                     IGCIPTKALLHSAYVANLVSHDAKELGVDVGSVKTDYGIAMRRSRKVSEQNSKGVEFL
                     MKKHKITVIKGTGVLAQNRTVRVGKDEYSARKAVVVASGSRVKGIPQIGLEINKTTVI
                     SSDEALFLEQIPATLAIIGAGAVGCEFADIFHAFGSKVTLIEALPRILPLEDAESSDT
                     LTKSYKKRGITIYAGANVKKASVKKDKVSLDVESGGKNETVEVDKVLMAAGRAVNTEG
                     LGLQEAGVQLTDRGFIKVNPATLETTAAGVYAIGDVAGPPMLAHKGYREGVVVAEIVA
                     GHHPQPIKYDNVPSVTYCHPEVASIGMTEDQAKERKLDYQVGRFPFSANGRARTANET
                     EGFVKIIRDKKYGEILGAHIVGSHASEIIHELTVARENEYTVEEVDLAIHAHPTLSEA
                     IAEAALDSMGRVMHI"
     gene            3316..3726
                     /locus_tag="VGQ24_12185"
     CDS             3316..3726
                     /locus_tag="VGQ24_12185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455648.1"
                     /translation="MRDQRHSGTFGFVAAVGACAVSLGLVVITATVLGVDGLRSGQPA
                     SLNPALYLLFGGTLGGVLAAAGMAWWLLGPIESTYRRGGLAMVCGFATVLLMLICIPV
                     HQFLGRSGLFALMTLCTVTAALLARRVRRLGTDP"
     gene            3723..4415
                     /gene="lipB"
                     /locus_tag="VGQ24_12190"
     CDS             3723..4415
                     /gene="lipB"
                     /locus_tag="VGQ24_12190"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: protein motif:HMM:NF010925.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HEV8455649.1"
                     /translation="MTQRLLVQDLGRRGYGEVLELQRSLCRQRIQGDLVEDLLLLVEH
                     EPVVTLGRGTRPGSVPSAPAALSRRGIEVFEVERGGDVTFHGPGQLVGYPIIDLRQHR
                     EDLHWYLRRLEGGLIGALDTLGIAAGPNPGLTGVWTGGRKLASIGIHVKQWVTFHGFA
                     LNVTTDLDYFDLIVPCGIKDVIMTSVAQELGRTDAALWGETRNAVIEGMGRALNLEPV
                     ETAIPHAFGQVS"
     gene            4690..5244
                     /locus_tag="VGQ24_12195"
     CDS             4690..5244
                     /locus_tag="VGQ24_12195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455650.1"
                     /translation="MADSTRRPSPDAQADQRITEILRAAESWSREAPRALMPAIRAVC
                     IRLAEMVADQRHYLAPLPEPQETERRTVLSMVADRLRSKPVTEGVEQHLKELEELELR
                     STGSWAMVASAQTEWITTAIRYLESCAARLPAGERPDPYWADDVVAGVIASVRALIGV
                     DELHARTEARYSGPVRRISPEEEE"
     gene            complement(5199..6617)
                     /locus_tag="VGQ24_12200"
     CDS             complement(5199..6617)
                     /locus_tag="VGQ24_12200"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF006053.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HEV8455651.1"
                     /translation="MKPNFVEREQPRMLQELTELLSIPSISALPEHAGDCRRAAQWLE
                     RHLRKLGCPAVSIIEGPGHPVVWAESPKVPDAPTLLIYGHYDVQPPDPLEEWTTEPFR
                     PTVRDGKLYARGASDDKGQVFCLLKAYEAVLDSKGQPPLNVHFIFEGEEECGGKVIFE
                     LLRNEPERTRADAALVCDMSYYAPGWPGLYTALRGLCYAEISVRTLERDLHSGTYGGV
                     APNAIETLVRILGELKAKNGEIRIPGLYQAVKPPSRAELDSWNKLPFDREDFLRSEVT
                     GKKLTGLEDRSVFERVWALPTFEIHGIKGGFTGEGAKTVIPAQATAKVSLRLVPGQAV
                     EEVGRALEGAVAAAAPDWAEVKVTLLHGGDPVQVDVDAPAFAVLDEAFEEVVGRAAVR
                     VRAGGSIPIVPELGLSGAPVILTGIGLPDDGLHSPNEKLDLTQLWSGIEIFGRFFELF
                     AEKGGARAYSSSSGEIRLTGPE"
     gene            complement(6635..7696)
                     /locus_tag="VGQ24_12205"
     CDS             complement(6635..7696)
                     /locus_tag="VGQ24_12205"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF021535.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HEV8455652.1"
                     /translation="MAFFVVVAALFAGYGTAYLASDDVRYLTRAGFEETRILQSRQPI
                     DRLVRSPDIDPALRRSLGLVLETRNYAARLGLEAEETYTTYSDVGRDTLLLVLQAAPR
                     DCICPHTWKYPVVGRIPYKGFFDPVAAQREAARFSSRGYDTYLRPSSAFSTLGWFNDP
                     LLSTALTRDSVELAATVFHEIAHNTLYVKSATPFNESFAQMVGYRSAQAFFEERGDRA
                     RAQQAVDRWHDEIVLGDYYAALVERLESLYSRHPDSATLEEGRRSAAAWARSQLEGPI
                     GQRLRTYKIGRLTERPINNAQLIGARIYRTRLDLFDRWYERHDRDVGRSVSALKTLME
                     GAEGDSAYARLERAVETKQ"
     gene            complement(7702..9378)
                     /locus_tag="VGQ24_12210"
     CDS             complement(7702..9378)
                     /locus_tag="VGQ24_12210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455653.1"
                     /translation="MGRLRSSLAVSCAVVMASCSDGTGPGGGPPLDCSEASVRVLAVG
                     EHQVIDPNQDGACIRLPAASAAGAEHLYVPLATASAEADDGISGPYLATGGSPAVASA
                     RAVPIPSPRLSAFQGPLAPEAFHAMLRGRERALSQSPSATLFNQGRISAAAGVPPVLG
                     DKRAFQVCATSACTSFVQTSATALSVGQRVAIFVDDSAPAPGYTTPELDDVKDLFDQF
                     LYPIDTTAFGRESDIDANGVVVVLLTQHVNALSPDCNSTGRVILGYFFGADLLPKSAA
                     NPGSNEAEVFYGLVPDPTNPQCDVTEAFARSHLPATFIHEFQHMISFNQHVLVRGGSA
                     EDTWLNEGLSHFAEELGGRQVPNIECPDSPSCFDEFIQRGDLTNAFEYLASPEDFFLI
                     EPGNSTGKLEERGANWLFVRWLADHFAAEPILGKDLTLKLVGTNQTGGTNVETQTGED
                     FSKLVGEWQLANYLDDLPGFAESTGRLGYSSWNFRQEAATAGISYPLVPDSTSGIGYS
                     HSGVLRAGSGRHIRVVQAPGAPAVDLTLTTPTGTALSSTLEPRIALVRVR"
BASE COUNT         1723 a         2997 c         3145 g         1597 t
ORIGIN      
        1 gtctgccact cgaagacggt atcggtcgcc cttaaggcag ccgagcagct cgccaaggac
       61 ggggtgaacg cggaggtgct cgatcttcgc acgatccggc cactcgacac cggcgcggtg
      121 ctcagctcgg tagccaagac gcaccgttgc gtcgtagtgg aggagggctg gccgttcgcc
      181 ggtgtgggtg cccaggtggt ggacacgatc caacgcgagg cattcgacga gctcgatgct
      241 cccatcatcc gggtgaccag cgccgacgtc ccgatgccct acaacaagca gctggaaaag
      301 gcagccaagg ccgatccggg gaaggtcgtc agcgcggtga accaggtgtt gtatcgggag
      361 tagtcgctag tcgttagtcc ctagtcgtta gtcgttagtc cctagtcgtt agtcgttagt
      421 cgttgatcga actgccagtc cgggtattag ctggcgtcta gtgactagcg actaaaaaaa
      481 cggaatagcg catgaccacg aaagtcgtaa tggaggccct ctcccccacc atggaggaag
      541 ggcgtctcgt cgaatggaag aagcaggagg gcgagcccgt cgcggtcggt gacgtccttg
      601 ccgaagtcga gaccgacaag gcggtgatgg agctcgtggc ccgagccggg ggcacgatgc
      661 tcaagcacat cgtcgaagcc ggcgccaccg tgccggtgtc ggagctggtg gcggtcatcg
      721 gcgagcctgg ggatgacgtc agcggggaag cgggacagac gggcagcggg gcggcggggc
      781 agcgaggcgg tacggagtcc caagcaacgc agccgtctcc cggtgagaac cggccggtct
      841 ccatgccggc cgcggcgccg tccgtccgcg aaggcaatgg tgcccgctcc gcaccctcgg
      901 ctcctgcacc agccgcgcaa gcaggatcca gggtgaaagc ctctccgctc gctcggcgca
      961 ttgcggcgga gcgtggtgtg gacctggtgg gggtcacggg atcgggacca gagggacgag
     1021 ttgtggctcg cgacctcgag accgccgccc tagcagcatc cccccgttcc gggactgctc
     1081 cgactattac tgccccgccg ccccgccgtg ccgctgcccc gctaggcagc cctgcttccg
     1141 cgccctacac cgacgttccc ctcacccaga tccgcaaaac catcgccagg cggctggccc
     1201 agtcgatcgg tccggtcccc accttctacc tcaccaccga ggtggacatg gagcgggtct
     1261 gggaggctcg cggggcgctt agcgcggagc ctaaggtctc gtttaacgac atcgtcatca
     1321 agtcggtcgc gatggcgttg cggcagcacc ccgcctgcaa cgcgtggtgg caggatgatc
     1381 acattcgcta ctggaacgag gtgcatgtcg ggatggcggt ggcggtcgag gacgggctga
     1441 tcacgccggt gattcggtac gccgacgtga agaccttacg gcagatcgca ggggagtcgc
     1501 gtgatctggc cggccgggcg cgggaacggc gactccggcc cgaggagtac accggcgcca
     1561 cgttctccat ctccaatctg ggcatgctgg atatcgacga gttcacggcc gtgatcaacc
     1621 ctcctgaggc cggcatcctg gcagtgggcc ggatcgtgga gaagccggta gcacacgaag
     1681 gggtcgtggc ggtgcgccgg cgaatgcggc tcacgatgtc gtgcgatcac cgcgtcatcg
     1741 acggagccac cggcgccgag ttcctgaaga ccctgaacac gatgctggag aatccgctgg
     1801 cgctggtttg gtaagtgaga ggtgagaggt gagacgtaag agggctgttc ctccacgatc
     1861 acctctcact tcttacctct cacttctcac ctgtgaggag atgtggccaa tcagttcgac
     1921 gtgatcatcg tggggggcgg gcctgccggt tatgtctgcg ctatccgggc cgcgcagctt
     1981 gggctcgcca ccgccgtggt cgagcgagac aagctcggcg gagtgtgcgt gaacatcggc
     2041 tgtattccaa cgaaggcact gctgcacagc gcctatgtgg ccaacctcgt gtcccacgac
     2101 gccaaggagc tcggtgtcga cgtcggcagc gtcaagactg attacggcat cgccatgcgg
     2161 cgttcgcgca aggtctcgga gcagaactcc aagggcgtcg agttcctgat gaagaagcac
     2221 aagatcacgg tcatcaaggg aaccggcgtg ctggcccaga atcggacggt gcgggttggc
     2281 aaggacgagt actcggcgcg gaaggccgtc gtggtcgcca gcggatctcg agtcaagggc
     2341 attccgcaga tcggcctcga gatcaacaag acgaccgtga tcagctccga cgaagcgctc
     2401 tttctggaac agatccccgc gacgctcgcc atcatcggcg cgggcgccgt cggctgcgag
     2461 ttcgccgaca tctttcacgc gttcggcagc aaggtgaccc tgatcgaggc cctgccccgg
     2521 atcctgccgc tggaggacgc ggagtcatcg gacacgctga cgaagagcta caagaagcga
     2581 ggcatcacga tttacgcggg cgccaacgtg aagaaggcct cggtcaagaa ggataaggtc
     2641 tcactcgacg tcgaatccgg cgggaagaac gagaccgtgg aagtggacaa ggtcctcatg
     2701 gctgccggcc gagcggtcaa caccgaggga ctgggattac aggaggccgg ggtacagctc
     2761 accgatcgcg gattcatcaa ggtgaatccg gcaacgctgg agacgacggc agcgggggtc
     2821 tatgccatcg gtgacgtggc gggtcccccg atgctggccc acaaggggta ccgggaggga
     2881 gtggtcgtcg cggagatcgt cgcggggcac catccccagc cgatcaagta cgataacgtt
     2941 ccgagcgtca cctactgtca ccccgaagtc gccagcatcg gcatgaccga ggaccaggcc
     3001 aaggagcgca agctggacta ccaggtcggc cgcttcccct tcagcgccaa tgggcgggcc
     3061 cgcaccgcca acgagaccga gggattcgtc aagatcattc gcgacaagaa atacggcgag
     3121 atcctcgggg cccacatcgt gggcagccac gcctcggaga tcattcacga gttgaccgtg
     3181 gcccgagaga acgagtacac ggtagaggaa gtcgatctcg ccatccatgc ccatcccacg
     3241 ctctccgagg cgatcgcgga ggcggcgctc gactcgatgg gccgggtgat gcatatctga
     3301 ggtgagaggt gaggggtgag agatcagcgg catagtggca cgtttggctt cgttgcggcc
     3361 gtcggagcct gtgctgtttc gctcggactg gtggtcatca cggcgactgt gctcggcgtt
     3421 gacggcctcc gatccggcca gcccgccagc ctgaaccccg cgttgtatct cctgttcggc
     3481 ggcaccctcg gcggtgttct ggccgcagcc ggcatggcct ggtggctgct ggggccaatc
     3541 gagtctacct atcgccgtgg cgggctggcg atggtctgcg ggttcgccac cgtcctcctc
     3601 atgctgatct gtatcccggt gcatcaattc ctgggacgga gcggactgtt cgccctgatg
     3661 accctgtgca cggtgacagc ggccctgctg gcaaggcgag tccgccgcct cgggacggac
     3721 ccatgacaca gcggctactg gttcaggacc tcggccgccg tggctatggt gaggtcctcg
     3781 aactgcaacg gagtctctgc cgccagcgga ttcaaggtga cctggtcgag gacctgctgc
     3841 tcctggtgga gcacgagccc gtggtcacac tggggcgcgg cactcgcccc gggagcgtcc
     3901 cctcagcccc cgcggcgtta tcgcgtcgcg gtatcgaggt cttcgaggtc gagcgagggg
     3961 gagacgtcac ctttcacgga ccggggcagc tggtgggcta ccccatcatc gacctgcgcc
     4021 agcaccggga agacctgcac tggtatctcc gccggctcga ggggggcctg atcggggcac
     4081 tcgatacact gggcatcgcc gcaggtccca accccgggct caccggcgtg tggactggag
     4141 gacggaagct cgcgagcatc ggcatccacg tgaagcagtg ggtgacgttc catggatttg
     4201 ccttgaacgt gacgacggat ctcgattact tcgatctcat cgtgccctgt ggtatcaagg
     4261 acgtgatcat gaccagcgtg gcccaggagc tggggcgaac cgatgccgcg ctctgggggg
     4321 agacgcgcaa cgccgtcatc gagggaatgg gccgggctct caatctcgag ccggtggaga
     4381 cggcgatccc ccacgcattc gggcaagttt cttagaagga agctcaccac agaggcacag
     4441 agggacacag agggatcatt gttttgcgga tgccccccgt cgcgtgatcg taagtctgtc
     4501 gcttggaagc tggtttgcag ccacgtacct tcttttcaac taaaagaaca cggaaaaatg
     4561 cgatttcgcg acgggggatc ttcgtgcgta agcgatccct ctgtgtcctc tgtgtctctg
     4621 tggtgaaaaa aaggggtggg gtagcggcgt aggttgcctt tgggagacca actggttttt
     4681 ctccctagta tggctgactc gacccgacgc ccctccccgg atgcccaggc agatcagcgc
     4741 atcacggaga tactccgcgc ggccgagagc tggtcccggg aggcaccccg agccctgatg
     4801 ccggcgatcc gcgcggtgtg catcaggctg gccgagatgg tggcggacca gcggcattac
     4861 ctggcgccac tgcctgagcc gcaggaaacc gagcggcgaa cggtgctgtc gatggtggca
     4921 gaccggctcc ggtcgaagcc ggtgaccgaa ggggtggagc agcacctgaa ggagctggag
     4981 gagctggagc tgcgctccac cggatcgtgg gccatggtag cctcggctca gaccgagtgg
     5041 attaccacgg ccatccgcta tctggagagc tgcgccgccc gcctgccggc cggcgagcgc
     5101 ccggacccgt actgggcgga cgacgtcgta gccggagtca ttgcctcggt gcgagcgctc
     5161 atcggtgtgg acgagctcca cgcccggacc gaggcccgct actcgggacc agtcagacgg
     5221 atttcaccgg aggaagaaga gtaggcccgc gccccacctt tttccgcaaa cagctcgaag
     5281 aaccggccaa agatctcgat cccgctccag agctgagtca ggtcgagctt ttcgttgggc
     5341 gagtgtagac cgtcgtcagg gaggccgatc ccggtgagaa tcaccggagc cccgctcagg
     5401 ccgagctcgg gcacgatggg aatggaccct cccgcccgca cccgcaccgc agcccttccc
     5461 acgacctcct cgaacgcctc atccagcacc gcaaaagcgg gagcgtctac gtcgacctga
     5521 accggatcgc ccccgtgcaa gagggtgacc tttacctcgg cccagtcggg agcggccgcg
     5581 gcaacggcac cctcgagcgc gcgcccgacc tcctcgacgg cctgccccgg caccaggcgc
     5641 agactcacct tggcggttgc ctgagccgga atgacggtct tggctccttc cccggtgaat
     5701 ccacccttga tgccgtgaat ctcgaaggtc ggaagcgccc acacccgctc gaagacgctg
     5761 cgatcctcca ggcccgtcaa cttcttgccg gtcacctcgc tccggagaaa atcttcccga
     5821 tcgaatggga gcttgttcca gctatcgagc tcggccctgc tgggtggctt gaccgcttgg
     5881 tacaggccgg gaatccggat ctcgccgttc ttcgccttga gctcgcccag aatccgcacc
     5941 agcgtctcga tcgcattcgg tgcgacgccg ccatacgtac ccgagtggag atcgcgctcg
     6001 agcgtgcgca ctgaaatctc ggcataacag agaccccgaa gtgcggtgta cagcccaggc
     6061 cagcccgggg catagtagga catgtcgcac accagcgccg catccgcccg ggtgcgctcc
     6121 ggctcgtttc gcagcagctc gaagatgacc ttgccgccgc actcctcttc accctcgaag
     6181 atgaagtgaa cgttcagcgg cggctgcccc ttggagtcca gcaccgcctc gtaggccttg
     6241 agcaggcaga acacctggcc cttgtcgtcg gaggcccctc gggcgtacag cttgccatcc
     6301 cgcacggtcg gccggaacgg ctctgtggtc cactcctcga gtggatcggg gggctgcacg
     6361 tcataatggc catagatcag gagcgtcggt gcatccggca ccttagggct ctcggcccac
     6421 accaccgggt gccccggacc ctcgatgatg ctcaccgccg gacatccgag cttcctcagg
     6481 tgccgttcga gccactgcgc cgcccggcgg caatcgccgg catgttcggg caaggcactg
     6541 atactgggga tcgagaggag ctcggtcagc tcctgcagca tgcggggttg ctcgcgttcg
     6601 acgaagtttg gtttcatgat gatcgcctct cctgctactg cttcgtttcc accgcccgct
     6661 ccagccgcgc gtacgcgctg tcgccctcgg cgccctccat caaggtcttg agcgcgctca
     6721 cgctccggcc gacatcccgg tcatgccgct cgtaccaccg atcgaacaag tcgagccgcg
     6781 tacggtagat ccgggccccg atgagctgcg cattgttgat cggtctttcc gtcagccggc
     6841 cgatcttata ggtccggaga cgctggccga tcgggccttc cagttgcgag cgggcccacg
     6901 cggcggccga cctgcggcct tcctccaggg tggcggaatc aggatgccgg ctgtacaggc
     6961 tctccagccg ttccaccagc gctgcgtagt agtcacccag cacgatctcg tcgtgccacc
     7021 ggtcgaccgc ctgctgtgcc cgggccctgt ccccccgttc ctcgaagaac gcctgggccg
     7081 agcgataccc gaccatttgg gcaaagctct cgttgaacgg cgtcgcgctc ttcacgtaca
     7141 gcgtgttgtg ggcgatctcg tgaaacacgg tggcggccag ctccaccgaa tcccgggtga
     7201 gcgccgtgga caggagcgga tcgttgaacc agcccagcgt ggagaacgcg gacgaaggcc
     7261 ggaggtaggt gtcgtatccc ctggaagaaa accgcgcggc ctcgcgctga gccgccaccg
     7321 gatcgaagaa gcccttgtaa ggaatccgcc cgacgaccgg gtacttccag gtatggggac
     7381 agatgcagtc tctgggtgcg gcctgcagca ccagcaggag cgtgtcgcgg cccacgtccg
     7441 agtacgtggt gtacgtctcc tcagcttcga ggccgagccg cgcggcatag ttccgggtct
     7501 cgagcaccag gccgagcgat cggcggagcg ccggatcgat gtcggggctg cgcaccaggc
     7561 gatcgatcgg ctggcgggac tggaggatcc gggtttcctc gaagccggcc cgggtgagat
     7621 agcgaacgtc atcactggcg aggtatgccg taccgtatcc ggcaaagagc gcggccacaa
     7681 caacgaagaa ggccatgcgg ctcaacgcac ccggaccagg gcgattcgcg gttcgagcgt
     7741 gctcgagagc gccgtaccgg tcggtgtggt gagtgtcagg tccacggccg gggcgccggg
     7801 agcttgcacc acgcgaatgt gccggcccga ccctgcccgc aatacgccgc tgtggctgta
     7861 accgataccg ctggtgctgt ccggcaccag cggataggag atccctgccg tagcggcctc
     7921 ctggcggaag ttccagctgc tgtacccgag tcgtccggtc gactcggcaa acccgggtaa
     7981 gtcatcgaga tagttggcca gctgccactc tccaaccagc ttcgagaagt cctcccctgt
     8041 ctgggtctcg acgtttgtgc cgccggtctg gttggtgcca accaacttga gagtgagatc
     8101 tttgcccagg atgggttcgg cggcgaagtg atcggccagc caccggacaa acagccagtt
     8161 ggcgccgcgc tcctccagct tacccgtcga gttgcccggc tcgatcagga agaagtcctc
     8221 cggcgaggcg agatactcga aggcattggt gaggtcgccc cgctggatga actcgtcgaa
     8281 gcaggacggg gaatccgggc actcgatgtt cggcacctgc cggccaccca actcctcggc
     8341 gaagtgggaa aggccctcat tcagccaggt atcctcggcg ctgccacccc ggaccagcac
     8401 atgttgattg aagctgatca tgtgctggaa ctcgtggatg aacgtcgcgg gcaggtggct
     8461 ccgggcgaat gcctcggtga cgtcgcactg cgggttggtg gggtcgggca cgagtccata
     8521 gaagacctcg gcctcgttgg aacccggatt ggccgccgat tttggcagga ggtcggcacc
     8581 gaagaagtag ccgaggatga ctcgtcccgt gctgttgcag tccgggctga gcgcattcac
     8641 gtgctgagtc agtaatacca cgacgacgcc gttggcgtcg atatccgact cgcgcccgaa
     8701 ggcggtcgtg tcgatcggat agaggaattg gtcgaaaagg tccttaacgt cgtcgagctc
     8761 tggagttgta tagccaggag caggggcgga gtcgtccacg aagatggcca cgcgctgccc
     8821 caccgataag gccgttgcgc tggtctgcac gaaggaggtg cacgccgagg tggcgcagac
     8881 ctggaatgcc cgcttgtcgc ccagcaccgg cggtacgccc gctgccgccg agattcgtcc
     8941 ctgattgaac agcgtcgcgc tggggctctg ggagagggcc cgctcgcggc ctcgcagcat
     9001 ggcgtgaaac gcctccggcg ccagggggcc ctggaaggcg gagaggcgcg gcgaggggat
     9061 ggggacggcg cgggccgacg caaccgcggg ggatccaccg gtcgccaggt aggggccgga
     9121 gatcccatca tccgcttcgg cgctcgcggt ggcgagggga acatagagat gctcggcacc
     9181 tgccgcggac gccgcaggga ggcgaatgca ggccccatcc tggttgggat cgataacctg
     9241 atgctcaccc accgccagaa cccggacact cgcctcggaa cagtcgagcg gcgggccgcc
     9301 accgggaccc gtcccgtcac tacagctggc catcaccacg gcacacgaaa cggctagaga
     9361 cgagcgcaat cgacccacct gtcaacactc cgcgaaaccg ttaaagaagg aagaatgaac
     9421 accggaagaa ctcaccgcgg acttagcaag ataaagcgcg gc
//
LOCUS       DASYRV010000457         6554 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3421706, whole genome shotgun sequence.
ACCESSION   DASYRV010000457 DASYRV010000000
VERSION     DASYRV010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6554
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3421706"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2190
                     /locus_tag="VGQ24_12215"
     CDS             <1..2190
                     /locus_tag="VGQ24_12215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012873823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HEV8455654.1"
                     /translation="EEEMGEPRGGEENAAPGRKEAQRKPRAGEPFESVIRSLRKPAPL
                     RDESLRNPRCVFQLVKRHFSRYTPEMVEQVTGCPKETFLKVAEIVLENSGRERTTGWV
                     YAVGWTQHTNGPQVIGCCALLQLLLGNIGRPGGGIMALRGHASIQGSTDIPTLYHSIH
                     GYMSAPSALKDHRTLREYLATEGMATGVWAGMPKYLVSYLKSMYGSAATPENDFGYDW
                     HPKISGDHSHMPMFVAMADNRVKGMICVGQNPATSLNAALERQGMRNLEWLVVKDNFL
                     TESATFWYRGPEVERGEIKPEDIATEVFFFPSAQVAETEGSFTNTQRMLQWHFKAADP
                     PGHCRSDLWFTHQLALRLKALYADSELPRDQPFKKLVWEFDPDPVRTAFPLRSPPAIR
                     GEPDAQKVLREINGYRTGFPDQHLAGYDELKDDGSTTCASWIYCGVFPAPGQNLAAVR
                     ISSPPEARGAHLTWGWTWPANRRVIYNRASADPAGRPWSEKKKWIWWDPAQKKWVGHD
                     VPDFPATKPPDAPAKPGAIGVDALSGKDPFILKPDGVGWLFNPAGLLDGPLPTHYEPT
                     ESPVRTALYRQQSSPVLKYWKHDGNPLAAVGDPHYPYVITTYRLTEHYLAGAMSRWNP
                     WLTELMPELFIELSPELAAEKGIRNTDWVRISTPRAQIRAKALVTRRVRPLRLGSKMI
                     HQVGMPWHWGWEGVVTGDVVNTLTALVGDPNVSIHEGKAFVCNVEKA"
     gene            2374..3207
                     /locus_tag="VGQ24_12220"
     CDS             2374..3207
                     /locus_tag="VGQ24_12220"
                     /inference="COORDINATES: protein motif:HMM:NF024644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEV8455655.1"
                     /translation="MPEPMGFYTDTTVCIGCKACEVACKEWNQLPATGGGKHEMSGDS
                     YDNTRRLDGEHWRHVKFIEQFSEDRSDGRWLMMSDVCKHCVQAPCLEVCPTGAIIRTE
                     FDTVVIQSDTCNGCRACIAACPFGVIGINDVSNVAQKCTLCYDRLQAGMEPACSQACP
                     TDSIRFGTIRELKEMAEARVQQLHQLGESRAHLYGADDKFLGGLNSFYLLVDEPEVYG
                     LPSSPKVPTRNLIPASLFSTAGALVLGLLGMVGLRKRRMDSSLRSEQAQRAASAEDTG
                     V"
     gene            3200..4132
                     /gene="nrfD"
                     /locus_tag="VGQ24_12225"
     CDS             3200..4132
                     /gene="nrfD"
                     /locus_tag="VGQ24_12225"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HEV8455656.1"
                     /translation="MSDTFFTGSPHWAWWITLYFFVGGIAGSAFFLASLLHLSGSADR
                     PLVRLGYYVAFGGAIISGFLLTVDLTRPLRFWHMLIQNHTGEPMFKPWVPMSVGSWGL
                     LCFGLFSFLAALAALSEERERPRLLRSPPIQFLRRRGPSTVIAVLGSIFGLFIAGYTG
                     VLLAVTNRPIWADSTLLGLLFLVSGASTGAAALILLAIWRQAGHPASIGWLAWFDRNV
                     LVLELLVLIVFLVSLGSVARVFLSWWGALLVVGVVGAGILIPLLLERGQRIHAPRRLV
                     SSASLVLLGGLLLRMVVLLSSNQIHVLGSGVTGP"
     gene            4386..5264
                     /locus_tag="VGQ24_12230"
     CDS             4386..5264
                     /locus_tag="VGQ24_12230"
                     /inference="COORDINATES: protein motif:HMM:NF016131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HEV8455657.1"
                     /translation="MQRTTPGLRTDTAARLAELERQRPEWHAWFRLLSETERALDDRG
                     WCTPLDEAELGDGLAGSDDAPLLNGRTLKVDPGAAQRLVRRLASTAAVGHLTDAASLR
                     GYRPSVADAVALIVAAVRQDLTELAALADAADVERGPLTSVAHLAALPLLQSCGRLLA
                     DRVPPSWHHGYCPICAAWPILAERRGLDRSRQLRCGRCAAAWEVQWLYCVYCGEREHE
                     RLGSLVPEDGGEILKVETCASCRGYLKSIATLQGAQPFELLLRDLETVELDLVAVERG
                     YGRPEESGFKLKVCLV"
     gene            5285..5611
                     /locus_tag="VGQ24_12235"
     CDS             5285..5611
                     /locus_tag="VGQ24_12235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455658.1"
                     /translation="MRPAEVCRRLLAALEASEGRRRRRKRNTTPDSIGMAIKRTILEE
                     TVRHDPDPDGYEGWLLERCLTQDGPSGSTRAMALDILSDWRLAQTSVVFRTWLEQGAP
                     SDDAAS"
     gene            5896..6315
                     /locus_tag="VGQ24_12240"
     CDS             5896..6315
                     /locus_tag="VGQ24_12240"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8455659.1"
                     /translation="MTEHHRAGDAQIPTRPTLLVVDDEEMVRRLAARMLITLGYRVLE
                     ASDGHEAVRVLQRNAQRIDGVLTDVAMPGLGGRQLGETIARCWPQIRVLYMSGFPAKR
                     VVSERAIDPTDPFIQKPFTEDQLGRRIRELLAGPIEQ"
     gene            complement(6319..>6554)
                     /locus_tag="VGQ24_12245"
     CDS             complement(6319..>6554)
                     /locus_tag="VGQ24_12245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455660.1"
                     /translation="GASRKTAPEQSGDENLEARVKPECVHLYPGVDPKTWYQVVQEGE
                     YRDDMEGLWIQVSDWVTYVLAQHFDLQARPGMH"
BASE COUNT         1073 a         2144 c         2191 g         1146 t
ORIGIN      
        1 gaggaggaga tgggagagcc gcggggcggt gaagagaatg cagccccggg gcggaaagag
       61 gcccagcgga agccccgcgc gggcgagcca ttcgaatcgg tgatccgctc gctcagaaag
      121 cccgctcccc tgcgcgacga gtcgctccgg aacccacgct gtgtctttca gttggtgaaa
      181 cgccacttca gccgctacac gccggagatg gtggagcagg tgaccggctg ccccaaggag
      241 acgttcctga aggtggccga gatagtcctg gagaactcgg ggcgggagcg gaccaccggc
      301 tgggtctacg ccgtcgggtg gacccagcac accaacggcc cgcaggtgat cggctgctgc
      361 gccctgctcc agctcctgct cgggaacatc ggccgccccg gcggcgggat catggcactt
      421 cggggccacg catcgataca agggtcgacc gacatcccga cgctgtacca tagcattcac
      481 ggctacatgt cggcgccatc ggcgctcaag gatcaccgga cccttcggga gtacctggcc
      541 accgaaggga tggccacagg cgtatgggcc ggcatgccga agtatctcgt ctcctacctc
      601 aagtcgatgt atgggtccgc ggcgaccccc gagaacgact tcggctacga ctggcatccc
      661 aagatctcgg gcgaccactc ccacatgccg atgttcgtcg cgatggccga caatcgggtg
      721 aaagggatga tctgcgtggg gcagaatccg gccacgtcac tcaatgccgc gctcgagcgc
      781 caggggatgc ggaacctcga gtggctcgtg gtaaaggaca acttcctcac cgagtcggcg
      841 acgttctggt accggggtcc cgaggtggag cggggcgaga tcaagccgga ggacatcgcg
      901 accgaagtct tcttcttccc ctcggcccag gtcgccgaga cggagggcag cttcaccaac
      961 acccagcgca tgctgcaatg gcacttcaag gcggccgacc cgccgggcca ctgccgttcg
     1021 gacctgtggt tcacccatca gctggctttg cgactcaagg cgctctacgc cgacagcgag
     1081 ctgccgcggg accagccttt caagaagctg gtatgggaat tcgatcccga cccggttcgg
     1141 acggcttttc cgctacgctc gcctcctgcc atacgtggcg agccggacgc gcagaaagtg
     1201 ctgcgcgaga tcaacggata ccgaaccggc ttccccgacc agcatctcgc cgggtacgac
     1261 gagctgaagg acgacggctc caccacctgc gcgtcgtgga tctactgtgg cgtgttccct
     1321 gcgcccggcc agaacctggc ggcggtgagg atctccagcc cgcccgaggc acggggagcc
     1381 catctgacgt ggggctggac ctggccagcc aaccgccggg tgatctacaa tcgggcttca
     1441 gcggatccag ccggccgtcc ctggagcgag aaaaagaagt ggatctggtg ggacccggcc
     1501 cagaagaagt gggtgggtca cgacgtcccc gattttccag ccaccaagcc gcccgacgct
     1561 cccgcgaagc cgggcgcgat tggcgtggac gcgctctcgg gtaaggaccc gttcattctc
     1621 aagcccgacg gcgtgggctg gctgttcaac ccggcgggcc tgctcgacgg gccgctcccc
     1681 acacactacg agccgaccga atcgccggtg cggaccgctc tgtaccggca gcagtccagc
     1741 ccggtgctca agtactggaa gcacgacggc aacccgctcg cggcggtggg cgacccacac
     1801 tacccctatg tgatcaccac ctaccggctc accgagcact acctggccgg cgccatgagc
     1861 cggtggaatc cgtggctcac cgagctgatg ccggagctct tcatcgagct ctcgcccgag
     1921 ctcgcggccg agaaagggat ccggaacacc gactgggtgc ggatcagcac gccgcgagcc
     1981 cagatccggg ccaaggcgct ggtgactcgc cgggtgcggc cgttgcgact gggtagcaag
     2041 atgatccatc aggtcgggat gccgtggcac tggggctggg aaggcgtagt aaccggggac
     2101 gtagtgaata ctctcaccgc gctggtgggt gatcccaatg tgagcatcca cgagggaaag
     2161 gccttcgtgt gcaacgtgga gaaggcatga tcagcgggtc ggcggggcag cggggcagcg
     2221 gggcagcgaa gcgctgtcat cccttcactg cgttcagggc aggctcaaag tcgggcaaag
     2281 gacggattct tcgctttgct cagaatgacc gtctgtgtgc ttggagctgc cccgccgccc
     2341 cgctgccccg ctgccccgcc gggagaatcc ccgatgcctg agccgatggg cttctacacc
     2401 gacacgacgg tgtgtatcgg gtgcaaggcc tgtgaggtcg catgtaagga gtggaaccag
     2461 ctccccgcga ccggcggcgg caagcacgag atgagcggcg acagctacga caacacccgc
     2521 cggctggacg gggagcactg gcgtcacgtc aaattcatcg agcagttcag cgaggatcgc
     2581 agcgacgggc gctggctcat gatgagcgac gtctgcaagc actgcgtcca ggcaccctgc
     2641 ctcgaggtct gccctactgg agccatcatc cgcaccgagt tcgacaccgt ggtgattcag
     2701 tcggacacct gcaacggttg ccgggcctgc atcgcggcct gtcccttcgg ggtgatcggc
     2761 atcaacgacg tttccaacgt cgcccagaag tgcaccctct gttacgaccg gttacaggcc
     2821 ggcatggagc cggcctgctc gcaggcctgc cccaccgact ccatccggtt cggcaccatt
     2881 cgggaactca aggaaatggc cgaggcccgg gtgcagcagc tgcatcagct gggcgaaagc
     2941 cgcgctcacc tgtacggagc cgacgacaag ttccttggcg ggctcaactc attctatctg
     3001 ctggtggatg agccggaagt gtacggcctg cccagctcgc ccaaagtgcc gacgcggaac
     3061 ctgattccgg cctcgctttt ctcgaccgcg ggtgctcttg tgctcggcct gctcggcatg
     3121 gtgggtttga ggaagcggcg gatggactct tcgctgcgct cagagcaggc tcagcgagcg
     3181 gccagcgcgg aggacaccgg tgtctgacac cttcttcacc ggctcgcccc actgggcctg
     3241 gtggatcacc ctctatttct tcgtgggtgg catcgccggc agcgcgttct tcctggcgtc
     3301 cctgctccac ctgtccggct ctgccgaccg tccgctggtc cggctcggtt actacgtcgc
     3361 attcgggggc gcgatcatca gcggcttcct gctcacggtc gatctcactc gcccgctgcg
     3421 gttctggcac atgttgatcc agaatcacac cggcgagccg atgttcaagc cgtgggtgcc
     3481 gatgtcggtg gggtcctggg gcctgctttg ctttggtttg ttctcgtttc tggccgcgct
     3541 cgctgcgctg agcgaggagc gagagcggcc cagactgctg cggtcgcccc cgatccagtt
     3601 cctgcggcgt cgggggccat ccacggtaat cgcggtgctg gggagtatct tcggactctt
     3661 tatcgccggc tacacggggg tcctcctcgc ggtgaccaat cgtcccatct gggccgattc
     3721 caccctgctt ggcctcctct tcctcgtctc cggagcctcg accggggcgg ccgcgctgat
     3781 cctgctcgcc atctggcgcc aggccggcca ccccgcatct ataggctggc tggcctggtt
     3841 cgaccgaaat gtgctggtcc tggagctgct ggtactgatc gtctttctcg tgtcgctcgg
     3901 ctccgtggcc cgggtattcc tgagctggtg gggagcgctc ctggtggtcg gagtggtcgg
     3961 agctggcatc ctgatcccac tgctgctgga gcgggggcaa cgcatccacg caccacgacg
     4021 gctggtgagc agcgcatcgc tggtgctcct gggcggcttg ttgctccgga tggtggtgct
     4081 gctgtcgtcg aaccagatcc atgtgcttgg ttcgggggtg accggtccat gaaccgagtc
     4141 attgcgcggc cgcacttcgc ccgaagcaat cccgccgcgg tgccgccgga tcgccacgcg
     4201 ggctcgcgcc cgctcgcgat gacttacttc tgcgctttgc tcctcaccgc ctgctcgagc
     4261 cccgaggcca taagggcccg aggcgatggc ccgggcgccg acgtgagaaa ctgggggaaa
     4321 ccggtggagc tccatgccgg tgcccagccc tatcacaaga cgccctgcgt cacggagcca
     4381 gtcgaatgca acggaccacc cccggtcttc ggaccgacac cgccgcccga ctagccgagc
     4441 tcgaacggca gcgacccgag tggcacgcct ggttcaggtt gctgagcgag acggagcgcg
     4501 cccttgacga ccgcggatgg tgcacgccgc tggacgaggc ggagcttggt gacggattgg
     4561 ctggttcaga cgatgcgccg ctgttgaacg gacggacatt gaaggtggac cccggtgcag
     4621 cgcagcgact ggtccggcgc ctcgcgtcta ccgcggccgt ggggcacctg accgacgcgg
     4681 cctcgcttcg cgggtaccgg ccctcggtgg ccgatgcggt ggccttgatt gtggccgcgg
     4741 tgcggcagga cctgaccgag ctcgcggcac tggccgacgc cgccgacgtc gaacggggtc
     4801 ccctaacgtc ggtggcccac ctggcggcac ttcctcttct ccagtcctgc ggccgattgc
     4861 tcgccgaccg ggtgccgccc tcctggcacc acggctactg cccgatctgt gcggcctggc
     4921 cgattcttgc ggagcgccgc ggtctcgacc ggagtcgcca gctcaggtgc gggcgctgcg
     4981 ccgcggcgtg ggaggtccag tggctctact gcgtctactg cggcgagcgg gagcacgaac
     5041 ggctgggttc gctcgtgccc gaggacggag gagagatcct gaaggtggag acttgcgcca
     5101 gctgccgggg gtacctcaag tcgatcgcaa ccctgcaggg agcccagccc ttcgagctcc
     5161 tcctccgtga tctcgaaacc gtcgagctcg atctggtggc ggtggagcgg ggctacggcc
     5221 ggccggagga gagcggcttc aagctgaagg tgtgcctggt ttgacctctt ctgcctcagt
     5281 gcccgtgcgt ccggccgagg tctgtcgccg gctcctagcg gcgctcgaag cttccgaagg
     5341 acgccgccgg agacggaagc ggaacactac gcccgactcg atcggaatgg ccatcaagcg
     5401 caccatcctg gaagagaccg tgcgccacga ccctgacccg gatggctacg aggggtggct
     5461 gctggagcgc tgcctcactc aggacgggcc cagcggctcg acgcgggcga tggcgctcga
     5521 cattctgtcc gactggcgcc tagcacaaac gtcggtggtg ttccggacct ggctcgagca
     5581 aggcgctccc tcggatgatg cagcatcgta ggctacactc ccttcacaac tcgggcgaag
     5641 gcatgttccg gcggccactg tcgcactcga tgtcgcggca gtggagcaag ggcttcatcg
     5701 ctgacgagta gtgtgagcgg agtgcgccgc aatctgtgac actgggcacc gctgttccca
     5761 tctcagagta tatagtaggc ggcacagggg gccccggctg attggctggg tgcccgtcgt
     5821 caccgtgtgg cgacctcaat tggaggattc tttcgagccg aggggatcgg tttccgcgac
     5881 gacggagcgg ccgctgtgac tgaacaccac cgtgctggcg atgctcagat accgacccgg
     5941 cccactctgc tcgtggtgga tgacgaggag atggttcgcc gactagccgc gcggatgctc
     6001 atcacattgg ggtatcgcgt gctcgaggcg tccgatgggc acgaggcggt acgggtactc
     6061 cagcgcaatg cccagcgcat agacggcgtc ctcaccgacg tcgccatgcc gggtctcggc
     6121 gggcggcagt tgggcgaaac gatcgcgcgg tgctggccgc agatccgggt gctgtatatg
     6181 tcggggtttc cagcgaagcg ggtcgtgtcg gagcgagcga tcgaccctac tgatccgttc
     6241 atccagaagc cattcacgga ggaccaactg ggaaggagga tccgcgagct gctggcgggt
     6301 ccgatcgagc agtagcgctc agtgcattcc cggccgggcc tggaggtcga agtgctgggc
     6361 caggacgtag gtgacccagt cactcacctg gatccataga ccttccatgt catcccggta
     6421 ctcgccttcc tgcaccacct ggtaccacgt cttcgggtcc acccccgggt acaggtgaac
     6481 gcactccggc ttgactcgcg cctcgagatt ctcgtccccg gactgttctg gcgccgtttt
     6541 ccggctggcc ccag
//
LOCUS       DASYRV010000458         2724 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_599556, whole genome shotgun sequence.
ACCESSION   DASYRV010000458 DASYRV010000000
VERSION     DASYRV010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2724
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_599556"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..243)
                     /locus_tag="VGQ24_12250"
     CDS             complement(<1..243)
                     /locus_tag="VGQ24_12250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455661.1"
                     /translation="MTGSGIASAATEAIALPGERPITPEVVREHNLNQLEYGRILDLL
                     GRIPTLTELGVFSALWSEHCSYKHSKPVLKTFPISGP"
     gene            complement(254..622)
                     /locus_tag="VGQ24_12255"
     CDS             complement(254..622)
                     /locus_tag="VGQ24_12255"
                     /inference="COORDINATES: protein motif:HMM:NF024845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HEV8455662.1"
                     /translation="MKQDKPSRNEDEYFAREDAELLRKQRERAHTAAVEAERKTHFMK
                     CPKDGYDLTSSEYHGVQIETCPHCGGMWLDAGELEAVAHEEHPTVLGRVLSDALSAFR
                     RSPRTRASERSIRGTGNPSS"
     gene            complement(619..1338)
                     /gene="purQ"
                     /locus_tag="VGQ24_12260"
     CDS             complement(619..1338)
                     /gene="purQ"
                     /locus_tag="VGQ24_12260"
                     /inference="COORDINATES: protein motif:HMM:TIGR01737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HEV8455663.1"
                     /translation="MTRVAVVRFPGSNCDFDTLRAVERSGAEASFVWHRDVDLRGADI
                     VILPGGFSYGDYLRSGAIARFSPVMQAVKQHAAGGGPVLGICNGFQILCEAHLLPGAL
                     LRNAGLTFVSKPVDVTVERTDTVFTADYETDSRLRLPVAHGEGRFVAAPETLRMLEAE
                     GRVVLRYVAATERSPFQANPNGSANHIAGICNAEGTIVGIMPHPERAADRLLGMTGGS
                     GFFTSLMAWHQEPSRSGVSSR"
     gene            complement(1338..1589)
                     /gene="purS"
                     /locus_tag="VGQ24_12265"
     CDS             complement(1338..1589)
                     /gene="purS"
                     /locus_tag="VGQ24_12265"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HEV8455664.1"
                     /translation="MTFRVHVRVMPRDGLLDPQGQAVEHALTALGFEEAGAVRVGRAI
                     ELAVVAGSRDEAEAKARQMCDKLLANPVTEDYLLEVEED"
     gene            complement(1586..2428)
                     /gene="pssA"
                     /locus_tag="VGQ24_12270"
     CDS             complement(1586..2428)
                     /gene="pssA"
                     /locus_tag="VGQ24_12270"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HEV8455665.1"
                     /translation="MRQVVVVMPSAFTLGNLFFGFWAIVSAFNGNFRWAGWFIVFAGI
                     LDMLDGRVARLSGTGTRFGAELDSLVDVISFGVAPALLMYFLDFSNAGRFAWILCYIY
                     VVAVALRLARFNVLSAGKPSTGWFTGMPSPAAGMTLAAYYPFSQTNWYRASVAYLDLQ
                     HQGLVVLMLLLAVLMVSNVKYPKFPPIGMRSARGIFGLVVHLVILLGGLLAPEYFLFP
                     LGLFYMTFGLARATVLGLMERPEPVAIVDERLADAHDPTLPPPLSHERRGRWGDRRQE
                     PDEL"
     gene            complement(2461..>2724)
                     /locus_tag="VGQ24_12275"
     CDS             complement(2461..>2724)
                     /locus_tag="VGQ24_12275"
                     /inference="COORDINATES: protein motif:HMM:NF014696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEV8455666.1"
                     /translation="KSSLDNEQSSVGLTTERGKVLIRQIAGLIARRIVTDHNVGTPVR
                     QGERMGMIRFGSRVDLFLPLGTEILVKPGDTTKVGVTPVAKWC"
BASE COUNT          508 a          896 c          863 g          457 t
ORIGIN      
        1 cggaccggaa atgggaaacg tcttcagcac cggcttggag tgcttgtacg agcagtgttc
       61 cgaccagagt gccgagaata ccccaagctc ggtaagcgtg gggatccggc cgagcaggtc
      121 caggatccgg ccgtactcca gctggttgag gttgtgctcc cgcaccacct ccggggtaat
      181 ggggcgttcc ccagggaggg cgatcgcctc agtcgcggcg ctggcgatgc cggaaccggt
      241 cactgccgta tcctcagctg gaagggttcc ccgtgccgcg gatcgatctc tcgctcgcac
      301 gggtgcgggg cgagcggcgg aaggcggaaa gcgcatcgga gagcacccgg cccagcacgg
      361 tggggtgctc ctcgtgcgcc accgcctcga gctcgcccgc atcgagccac atcccgccgc
      421 aatgagggca ggtctcgatc tgtactccgt ggtactcgct gctggttaga tcgtatccgt
      481 ccttcggaca cttcatgaag tgcgtcttcc gttctgcttc gaccgccgcc gtatgggcgc
      541 gctcccgctg cttgcgcagg agctccgcat cttctcgagc gaagtattcg tcttcgttcc
      601 ggctcggctt atcctgcttc atcggcttga aactcctgac ctggatggtt cctgatgcca
      661 tgccatcagg gaagtgaaga agccactgcc tccagtcata cccaacaggc gatctgcggc
      721 ccgctccgga tgaggcatga tcccgacgat ggtgccttcg gcattgcaga tgccggcgat
      781 gtgattggcc gacccgttgg gattggcctg aaacggcgaa cgctcggtgg cggccacata
      841 gcgtagcacc accctccctt cggcctccag catgcgcaga gtctcgggcg cggccacgaa
      901 ccggccttcg ccgtgggcca ccggaaggcg cagccgcgag tccgtctcgt agtcagcggt
      961 gaacacggtg tcggtccgct cgaccgtgac atccaccggc ttcgacacga acgtgagtcc
     1021 cgcattccgt agcaaggctc cgggaagcag gtgcgcctcg cagaggatct ggaatccgtt
     1081 gcatatgccg agcaccggtc cgcctccggc ggcgtgctgc ttcacggcct gcatcacagg
     1141 actaaaccgg gcgatggcgc cggagcgcag gtagtcgccg tagctgaagc cgccgggcag
     1201 gatcacgata tcggcgcccc gcaggtccac atcgcggtgc cagacgaagg aggcctcggc
     1261 accggatcgt tcgacggccc gcagcgtgtc gaagtcgcag ttgctgcccg gaaagcggac
     1321 gaccgccact cgggtcatca gtcctcctcg acctcgagca ggtaatcctc ggtcaccggg
     1381 ttggccagga gcttgtcgca catctgtcgc gccttggctt cagcttcgtc ccgggagccg
     1441 gcgaccaccg cgagctcgat cgcccggccg acgcgtactg ccccggcctc ctcgaagccc
     1501 agagccgtca gggcgtgctc gactgcctgc ccctgtggat ccagcaggcc gtcacgcggc
     1561 attacccgta cgtggactcg aaaggtcata gctcgtccgg ctcctggcgg cggtcgcccc
     1621 accggccgcg tcgttcgtgg gaaagaggtg gcggcagcgt cgggtcgtgg gcatccgcca
     1681 gccgttcatc cacgatcgcg accggctcgg gtctctccat gaggcccagg acggtggccc
     1741 gcgccaaccc gaaggtcata tagaacaggc ccaatgggaa taaaaaatac tcgggtgcga
     1801 ggaggccgcc gagcagaatc accagatgca ccaccaggcc gaaaatgccg cgcgcgctcc
     1861 gcatgccgat aggaggaaac ttcgggtact tgacgttgct caccatcagg acggccagaa
     1921 gcagcatgag gacgacgagt ccctggtgct ggaggtcgag gtaggccacg gaggcgcggt
     1981 accagttggt ctggctgaac gggtagtagg ccgccagcgt cattccggcc gccggtgagg
     2041 gcatgccggt gaaccacccg gtcgacggct tgccggccga gagaacattg aaccgtgcca
     2101 gccggagcgc cacggcgacc acatagatgt agcacaggat ccaggcaaat cgcccggcgt
     2161 tcgagaaatc gaggaaatac atcagcaacg cgggcgcgac cccgaaggag atgacgtcca
     2221 ccagcgaatc cagctcggct ccaaaccggg taccggttcc cgagagccgc gccaccctgc
     2281 cgtcgagcat atcgaggata ccggcgaaca cgataaacca acccgcccaa cggaagtttc
     2341 cgttgaaggc cgagacgatg gcccagaagc caaagaagag gttgccgagc gtaaaggcgc
     2401 tcggcatgac cacgaccacc tggcgcatgg aagggcgccg tagcccttcc cggttgtgcc
     2461 tcagcaccat ttcgccaccg gcgtgactcc caccttagtg gtatctcccg gcttgaccag
     2521 gatttcagtc cccaagggca gaaacagatc cacccgggat ccgaaacgga tcatgcccat
     2581 gcgctctccc tggcgtaccg gggtgccaac gttatggtcg gtcacgatcc ttcgcgctat
     2641 cagaccagcg atctgccgga tcaacacctt gccgcgctcg gtcgtgagcc cgaccgatga
     2701 ctgttcgttg tcgagactgg actt
//
LOCUS       DASYRV010000459         7409 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1966762, whole genome shotgun sequence.
ACCESSION   DASYRV010000459 DASYRV010000000
VERSION     DASYRV010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7409
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1966762"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1150)
                     /locus_tag="VGQ24_12280"
     CDS             complement(<1..1150)
                     /locus_tag="VGQ24_12280"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8455667.1"
                     /translation="MSEHSSGNTHRPPMRIVHVIDNLAPGGTERQCVELVRGLSRLGV
                     RSAVFYFTPGPLLAELDAAAIPVRALEQASVRSVGFPARVAALAREIRRWAPDVVQTY
                     GFHSNVRGLLAAFLSGVPVRIAGRREFAKCLSPGQRRADRWAWRLAHRIVANSEAVRR
                     QLMNDERVPAAKIMVIRNGLDLQPWLGISGPHDTEADPVVGMVAHFREDKDHLTFLRA
                     AREVHERIPVARFCLVGSGPLQPAMREWAGRLGIADRVEFAGRLEAEALRAAVSRFRI
                     SVLASKSEGLPNTVLESMAAGRPVVASAVGGTEELLADEVTGFLVPAEQPAILADRIV
                     RLLKDPGLAERMGERARHTVEREFTADRMARQFGALYRELLVERRGRDR"
     gene            complement(1147..3150)
                     /locus_tag="VGQ24_12285"
     CDS             complement(1147..3150)
                     /locus_tag="VGQ24_12285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455668.1"
                     /translation="MREFVCRCLLLGAVGLLFSVESALAYLQDSGAHAPPGYFTGLPP
                     EAGGGYIDPIFGTSVKRVSNALATADSAFTGRNLTFVMTEYSTMSPFNQDNSRLLLLH
                     QSYFALYDGTGNYLRDLPLEIHSRTEPRWSRRDPNVLYYINGHQLKAYDVATGAVSVV
                     RTFTEYAIVYGGGESDICFDGDHFVLVGDSKDIFVYEISTDTKGPVLDTTGRGGFDNV
                     YLTPDDNVLVSWFAGGASRYQGIELYDRNMRFLRQVYRAIGHMDVTRDITGEEVLLLV
                     NAGDPHPPADCQNAIVKIRLSDARSTCLISFDWSLAQHVSAPDGNGWFFVTTYSPADL
                     VPLVTWPPYANEILQIRLDGSEVRRLAHHRSRPFDTYNYTPRAAVSRDGSRLVYSSNW
                     GLQAILGNPIGYTDVYLLAVRVEENDPSVRYTCDWFPNYIALHSAGSAVLAMQPRAQA
                     MFSFAGTGVTWIGYRDEWSGLANVYVDGELRAIVDTFASPAQAQTALFSATDLAAGSH
                     TLVVEVAGQRNASSAGSWVWVDAFDVVSGGAETVRSEQDSPAIWYSCDWFPSRLSIHS
                     GSRAVLAMMAGAQAIFPFAGTGVTWIGYRDQWSGIAQVYVDGILRDEVDGYTAPDFEA
                     QAMMATVSGLPPGEHVLVVEVTGRKNPASSGTWVWVDAFEIRP"
     gene            complement(3147..4346)
                     /locus_tag="VGQ24_12290"
     CDS             complement(3147..4346)
                     /locus_tag="VGQ24_12290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455669.1"
                     /translation="MLAEQITKALWCLRWLPAYGWQQLARRPRRGPLHLMMTLADHFE
                     PAIVPGEPKKWASADEQERRLERWAVEYPRAVEAWRDADGRPLRHTYFYPAEQYHKTL
                     IDRLAEHCHAGWGEIEVQLHHGVDASDTGENTRRLLCEFRNALAQRGCLSQWDGAGRP
                     RYAFVHGNGALANGAGGRFCGVDEEMQILAETGCYADLTLPSGPYDAPAGKINRLYEC
                     ALPLRERAPHRRGRDLRRGRPPETFPLIIQGPLGLDLTRRLRRWPWPRIEGGAITASC
                     PPMMHRLTLWLRPAITVRSRPDWLFVKLHCHGMDPRDEAVMFGAPMRRFLQELASETR
                     ATGTYRIHFVTAREMVNVILAACDGREGNPADYRDYRLRMSTPQREAQPTVRQDIVPS
                     ARRLPGE"
     gene            complement(4414..5352)
                     /locus_tag="VGQ24_12295"
     CDS             complement(4414..5352)
                     /locus_tag="VGQ24_12295"
                     /inference="COORDINATES: protein motif:HMM:NF014571.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAC(3) family N-acetyltransferase"
                     /protein_id="HEV8455670.1"
                     /translation="MTSHLSQLLTRSRAGLAPAYRGLRRRLAQLDRALDRRTLSLSEL
                     AKLLEALGVASGATVLLHTSMENIGRRVPDMKPVTLIRLLQELLGEGGTLLMPTFPFR
                     GRQRDYADRCDSFDVRRTPSQAGLVTEVFRRMPGVVRSLHPTHPIAGWGTHARDLLTA
                     HHLGTTFGPDSPMYKLGQRGGLVVGLGTRPRDTFTILHVPEELHPATRAWAFDEQPRV
                     MTIVDGARRIPYRFHVLRTAAERDRFERDLLKALRKEGVVKCFIEGGLPGSRARADEM
                     IERGLQLIDGFSRRFDRASVELTSGGVLNTVSVHPD"
     gene            complement(5349..6521)
                     /locus_tag="VGQ24_12300"
     CDS             complement(5349..6521)
                     /locus_tag="VGQ24_12300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455671.1"
                     /translation="MNRRALLRACARDLGPRPARTISLQQSLEGAYAWLCRAQDGTAD
                     DGVAGWYHLFRGWAPSYPETTGYLIPTFLTYASVMAQPGARARALRMADWEVDVQLPS
                     GAVRSGVLSTRVGPAVFNTGQVLFGWTAAYQTTGDDRYARAAQRAAEWLRRGQDTDGA
                     WRKNLSLVAHSTLQTYNVRAAWGLAWAGQVLDEPRWIQAARKNCDWALRQQQRPTGWF
                     GHNGFSDTEVPLLHTIGYVLEGLLGVGELLTDQRCVEAARSGIEPLAAEYAGAGRLAG
                     RYDGQWRGTVRWRCLTGEAQLALVLARLARHAGGATATRMARALLEDVAGVQDLRGPY
                     PETRGGISGSQPVWGGYSPFAYVSWAAKFQIDALLLCLFGADVHQPPARQASATLR"
     gene            complement(6602..>7409)
                     /locus_tag="VGQ24_12305"
     CDS             complement(6602..>7409)
                     /locus_tag="VGQ24_12305"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="asparagine synthase C-terminal domain-containing
                     protein"
                     /protein_id="HEV8455672.1"
                     /translation="YVVEQRERRYRFLPAPARAALGGIGRSLPGWMRGRNFLRHIALN
                     DAERYLDAVTLFPPDEQQRLFRPEAFDQLSSHDPWRLMAAQLAPNGHWLSALQRFDLK
                     TYLPLDILTKVDRMSMAHSVEARVPLLDHKLVEFAATIPPDLQLRGGTTKYIFKRAMQ
                     GIVPDEVIRRPKHGFGIPLGRWFRGQLAGFARDLLLSETSRRRGILDTGYVEQLLERH
                     QRGQELDLPLWTLISFELWCRAFLDRRFPATWLSSARRRTAALGAPSVAR"
BASE COUNT         1226 a         2464 c         2567 g         1152 t
ORIGIN      
        1 agcgatcccg accccgccgt tcgacgagta actcccggta gagggcgccg aactgacggg
       61 ccatccgatc ggcggtgaat tcgcgttcga ccgtgtgccg ggcacgttcg cccatgcgtt
      121 cggccagacc gggatccttc agcagccgga cgatccgatc ggcgaggatg gcgggttgct
      181 cggcgggaac cagaaagccg gtgacctcgt ctgccaagag ttcctccgtt ccccctaccg
      241 cgctggcgac cactggccgg cccgcggcca tcgactccag caccgtgttg ggcagtccct
      301 ccgacttcga tgccaggacg gagatgcgga accggctcac cgccgcccgg agggcctcgg
      361 cctccagccg gcccgcaaac tcgacccggt ccgcgatgcc gagccgccct gcccactctc
      421 gcatcgctgg ctggaggggc cccgagccga cgagacagaa gcgggcaacg gggatgcgct
      481 cgtgcacctc gcgcgccgcg cgcaagaacg tcaggtggtc cttgtcctcg cgaaagtggg
      541 ccaccatccc gaccaccggg tcggcctcgg tgtcgtgcgg ccccgaaatg cccagccacg
      601 gctgcaagtc cagcccgttt cggatgacca tgatcttggc ggcggggaca cgctcatcgt
      661 tcatgagctg gcgccggacc gcctccgagt tcgccacgat ccgatgcgcc agccgccacg
      721 cccaccggtc cgcccggcgc tggccggggc tgaggcactt cgcgaactcg cgtcggccgg
      781 cgatgcgcac cggcacaccc gacaggaacg ccgccaggag gccccggaca ttgctgtgaa
      841 agccgtacgt ctgcacgacg tcgggagccc agcgccgtat ctcgcgcgcc agggccgcca
      901 cccgggccgg aaacccgacc gaccgcacgc tcgcctgctc cagggcgcgg acggggatgg
      961 cagcggcatc gagctcggcc aacaggggtc cgggggtgaa atagaagacc gcgctccgga
     1021 cgccgaggcg cgagaggccg cggacgagct ccacgcactg ccgctcggtg ccaccgggag
     1081 caaggttgtc gatcacgtgg acgatccgca tcggcgggcg gtgggtgttc ccagacgagt
     1141 gttcgctcaa ggacggatct cgaacgcgtc tacccagacc caggtgccgc tcgatgccgg
     1201 gttcttgcgc ccggtgacct cgaccacgag aacgtgttct cccggcggca ggccgctgac
     1261 cgtggccatc atggcttgag cctcgaaatc cggcgcggtg taaccgtcga cctcgtcgcg
     1321 gaggatcccg tcgacgtaga cctgcgcaat accgctccac tggtcccgat acccgatcca
     1381 agtgaccccg gtaccggcga acgggaagat ggcctgggca ccagccatca tggcgagaac
     1441 ggccctgctg ccactgtgaa tcgacaaccg gctcgggaac caatcgcagc tgtaccagat
     1501 ggctggactg tcttgctcgg accggacggt ttcggcgccg ccggaaacca catcgaacgc
     1561 atcgacccac acccacgatc cagctgagct ggcgttgcgc tggccggcga cctccacgac
     1621 cagggtgtgg ctgccggccg ccaggtcggt ggccgagaag agcgcggtct gggcctgggc
     1681 gggcgaggcg aaggtatcga cgatggcccg cagctcgcca tcgacgtaga cgttggcaag
     1741 gccggaccac tcgtcgcggt acccgatcca ggtgacgccg gtgccggcga aggagaacat
     1801 ggcctgagcg cggggctgca tggcgaggac ggcactgccg gcgctgtgga gggcaatgta
     1861 gttcggaaac cagtcgcacg tgtagcggac ggacgggtcg ttctcctcca cgcggactgc
     1921 caatagatac acgtcggtgt acccgatagg attgccgaga atggcctgga ggccccagtt
     1981 gctgctgtat acgagccggc tgccgtcgcg gctcaccgcg gcgcgcgggg tgtagttgta
     2041 ggtatcgaac gggcggctcc ggtgatgcgc gagcctcctc acctccgagc catcgagcct
     2101 gatctggagg atctcgttcg cgtagggggg ccaggtgacc agcggaacga ggtcggccgg
     2161 ggaatacgtg gtgacgaaga accagccgtt tccgtcgggc gccgacacgt gctgagccag
     2221 actccagtcg aaggagatca ggcacgtcga tcgcgcgtca gacaaccgga tcttcacgat
     2281 cgcgttctgg cagtccgcgg ggggatgcgg atcgccggcg ttcaccaaca agaggacctc
     2341 ttcgccggtg atgtctcggg ttacgtccat gtgcccgatc gcgcggtaga cctgacgcag
     2401 gaaccgcatg ttcctgtcgt acagctcgat gccctgatag cggctggcgc ccccggcaaa
     2461 ccagctcacc aggacgttgt catcgggggt gaggtagacg ttgtcgaagc ctccccgccc
     2521 cgtggtatcg aggaccggcc ccttggtgtc ggtgctgatc tcgtacacga agatgtcctt
     2581 cgagtcgccc accagaacga agtgatcccc gtcaaaacag atgtcggact cgccgccacc
     2641 gtagacgatc gcgtattcgg tgaaggtccg cacgaccgag acggcgccgg tggccacgtc
     2701 gtacgccttc agctggtgac cgttgatgta gtagaggacg ttcggatcgc gacgcgacca
     2761 ccgcggctcg gtccgggagt ggatctccag cggaaggtcc cgcaggtaat tgccggtgcc
     2821 gtcatagagt gcgaagtaac tctggtgtag gagaaggagt ctcgagttgt cctggttgaa
     2881 cgggctcatc gtcgagtatt cggtcatgac gaacgtcagg ttcctgcccg tgaacgcgct
     2941 atcagccgtg gcgagggcat tggagacacg tttgacgcta gtgccgaaga tcgggtcgat
     3001 gtacccgccg cccgcttcgg gcggcagacc ggtgaagtag ccgggaggcg cgtgggcgcc
     3061 cgaatcctgg agatacgcca aggccgattc caccgagaac aggagcccga cggctcccag
     3121 aagaaggcag cggcaaacga actctctcat tcgccaggca gtctgcgggc tgaagggaca
     3181 atgtcttggc ggactgtcgg ctgggcctcg cgctgtggcg tgctcatccg gagccggtag
     3241 tcccggtagt cggcggggtt tccctctcga ccatcgcagg cggccaggat cacgttcacc
     3301 atttcccgcg ctgtgacgaa gtgaatccgg tacgtgccgg tggcgcgcgt ctcactcgcg
     3361 agttcctgaa ggaagcgtcg cattggcgcg ccgaacatga cggcctcgtc tcggggatcc
     3421 attccgtgac agtggagctt gacgaagagc cagtcggggc ggctcctgac cgtgatggcg
     3481 ggccgtagcc acagggtcag ccggtgcatc atcgggggac aggacgccgt tatcgcgccg
     3541 ccttcgatcc gaggccaagg ccaccgtcga aggcgccggg tcaaatcgag cccgagcggg
     3601 ccctgaatga tcagcgggaa ggtctccggc ggccgcccac gccggaggtc tcgcccccgg
     3661 cgatggggcg ccctttctcg caagggcagt gcgcactcgt agaggcgatt gatctttccc
     3721 gccggggcgt catacggccc tgacgggagc gtcagatccg cgtaacagcc cgtctcggcc
     3781 aatatttgca tctcctcgtc caccccgcag aaacgacctc cggccccgtt cgccagcgcc
     3841 ccgttgccgt ggacgaaggc gtagcgcggc cgcccggcgc catcccactg ggagaggcag
     3901 ccgcgctggg ccagcgcgtt tctgaactcg cacagcaatc ggcgcgtgtt ttctcccgtg
     3961 tcggacgcgt caacaccgtg gtggagctgg acctcgatct cgccccatcc ggcgtggcag
     4021 tgctcggcca ggcggtcgat gagggtcttg tgatattgct cggccggata gaaataggta
     4081 tggcgcaagg ggcggccatc ggcgtcgcgc caggcttcga ccgcccgcgg gtactccacg
     4141 gcccaccgct cgaggcgccg ctcctgctcg tccgcgctgg cccacttctt gggctccccc
     4201 gggacgatcg cgggttcgaa gtggtcggcc agggtcatca tgagatgcaa ggggccccgg
     4261 cgagggcggc gcgcgagttg ctgccagccg taggcgggga gccagcggag gcaccagagc
     4321 gctttggtga tctgttcggc gagcacagtc aatcggaccg cccgggcagg cacacgcgcc
     4381 gcgatcggct gccggggcct ggttcgagct gtctcagtcg ggatggactg aaacagtgtt
     4441 gagcactccg ccggatgtca gctcgacgga cgcgcgatcg aagcgacggc tgaatccgtc
     4501 gatgagctgg agaccgcgtt cgatcatctc atcggctcgg gctctcgagc ccggcaagcc
     4561 gccttcgatg aagcacttca cgacgccctc cttgcgcagc gccttcagaa ggtcccgctc
     4621 gaatcggtcg cgctcggcgg ctgtcctcag cacgtggaac cggtacggaa ttcgccgagc
     4681 gccatcgacg atggtcatga cgcgcggttg ctcgtcaaag gcccaggcgc gagtcgccgg
     4741 gtggagctcc tctggcacgt gcaggatggt gaacgtgtcc cgtggtcgcg tgccgaggcc
     4801 gaccaccagc cccccgcgtt gtccgagctt gtacatcggc gaatccggtc caaaggtcgt
     4861 tcccagatgg tgcgcggtca ggaggtcgcg cgcgtgtgtt ccccaccccg cgatcgggtg
     4921 ggtcggatgc aggcttctca cgactccggg catccgtcgg aagacttcgg tgaccaggcc
     4981 ggcctgggag ggcgtccggc ggacgtcgaa gctgtcgcac cggtcggcgt agtcccgctg
     5041 gcggccccgg aaggggaacg tcggcatcaa caaggtgccg ccctcgccaa gaagctcttg
     5101 tagcaaccgg atcaacgtga ccggcttcat gtcagggacg cgccggccga tgttctccat
     5161 cgaggtgtgg aggaggacgg tcgcgccgga ggccaccccg agggcctcca gaagcttcgc
     5221 gagttcggag agcgacagcg tccgccggtc gagtgcgcga tccagctgcg ccaaccggcg
     5281 gcgcagaccc cgataggccg gggccaggcc ggcgcggctc cgcgtcaaca gctgcgagag
     5341 atgcgaggtc atcggagcgt ggccgatgcc tggcgcgccg gcggctggtg cacgtcggca
     5401 ccgaacaggc agagcaggag ggcgtcgatc tgaaacttgg cggcccagct gacgtaggcg
     5461 aagggggaat acccgcccca caccggctgc gacccgctga tgccgccccg ggtctccggg
     5521 tacggaccgc ggaggtcctg gacccccgcg acgtcctcga ggagcgcccg ggccattcgg
     5581 gtcgcggtgg cgccaccggc gtgcctggcc aggcgggcga gcacgagggc cagttgggcc
     5641 tcgccggtga ggcaccgcca ccggaccgtg ccgcgccact gcccatcgta ccgtcccgcg
     5701 aggcgaccag ctccggcata ctcggcggcc agcggttcga tccccgatcg ggcggcctcg
     5761 acgcaccgtt ggtcggtcag cagctcgccg acaccgagca gcccttccag cacgtagcca
     5821 atggtgtgga gcaaggggac ttccgtgtcg ctgaagccgt tgtgtccgaa ccagccggtc
     5881 ggccgctgct gctgccggag ggcccagtcg cagttcttgc gcgcggcttg gatccaccgg
     5941 ggctcgtcga gcacctggcc ggcccacgcc agtccccagg ccgcgcggac gttgtatgtc
     6001 tgcagcgtgc tgtgcgccac cagcgagagg ttcttccgcc acgccccgtc cgtgtcctga
     6061 cctcggcgga gccattccgc cgcccgctgg gccgcccgcg cgtatcgatc atcgccggtg
     6121 gtctggtagg cggcggtcca gccgaagagg acctgtccgg tgttgaacac ggcgggaccc
     6181 accctggtgc tcagcactcc gctgcggacg gctcccgacg gcaactgcac atcgacttcc
     6241 cagtcggcca tccggagggc gcgcgctcga gcccccggct gcgccatgac ggaggcatag
     6301 gtcaggaacg tcggaatgag gtagccggtg gtctcggggt acgacggagc ccatcctctg
     6361 aacaggtggt accacccggc cacgccgtca tcggcagtgc cgtcctgggc ccggcaaagc
     6421 caggcgtagg cgccttccag actctgctgc agggagatgg tcctcgccgg gcgcgggccc
     6481 aggtctcgag cacacgctcg gaggagcgcc cggcggttca cagcgctcag cggtgagcac
     6541 atccgagcca gcgaaatggc tgcctcgaga cagcgccgag acaccggccc gcgtcctcgg
     6601 cctatcgcgc caccgagggc gcgccaaggg cggcggtccg acgacgtgcg gaggagagcc
     6661 atgtcgcggg gaacctccga tcgagaaagg ctcggcacca gagctcgaag gagatgagcg
     6721 tccacagcgg caggtccaac tcctgtccgc gttgatggcg ctccagaagc tgctcgacgt
     6781 agccggtgtc caggattcct cggcgtcgac tggtctccga gagcagcaga tctcgggcga
     6841 agccggcgag ctgccctctg aaccaccggc cgagggggat gccgaagccg tgcttgggtc
     6901 gcctgatgac ctcatcgggc acgatgccct gcatggcgcg cttgaagatg tacttggtcg
     6961 ttccgccgcg cagctgcagg tccggcggga tggtggcggc gaactcgacg agcttgtgat
     7021 cgaggagcgg gacccgcgct tccaccgaat gcgccatgct catccggtcc accttggtca
     7081 ggatgtccag cggcaggtag gtcttcagat cgaatcgctg cagcgcggac agccagtgac
     7141 cgttcggggc gagctgggcg gccatcaggc gccagggatc gtgactcgag agctggtcaa
     7201 aggcttcggg ccgaaacagc ctctgctgct cgtccggtgg gaacagcgtc accgcgtcca
     7261 gatagcgctc ggcgtcgttc agcgcgatgt ggcgcaagaa gttgcggcct cgcatccacc
     7321 cgggcaggct gcggccgatg ccgccgaggg cggcccgggc cggggcgggc aggaatcgat
     7381 agcgtcgctc ccgctgctcg accacgtat
//
LOCUS       DASYRV010000460        12307 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3711191, whole genome shotgun sequence.
ACCESSION   DASYRV010000460 DASYRV010000000
VERSION     DASYRV010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12307
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3711191"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="VGQ24_12310"
     CDS             complement(<1..279)
                     /locus_tag="VGQ24_12310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455673.1"
                     /translation="MRVNVLFQAGFVAALVAVPAPTIPPAVVEYVIPRPGNFPHDPAV
                     AKDGTVWYTDQRNSYIGHLDPSSGKIVDYSTPTPGSGPHGITVAPDGYV"
     regulatory      415..488
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00521"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00521"
     gene            566..1858
                     /gene="thrC"
                     /locus_tag="VGQ24_12315"
     CDS             566..1858
                     /gene="thrC"
                     /locus_tag="VGQ24_12315"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEV8455674.1"
                     /translation="MPGAPSGTALLDPPVSPSGASETLRVLPLHCAVCGAEYAPAPVA
                     ICERCLGPLEPVYSPTRALPDSAAISRRDHSLWRYREFLPIEGRICYSLDTGMTPLVE
                     SPALARRLGVARAWLKNDSVSHPTLSFKDRVVASAINAAQALGLDTIACASTGNLANA
                     TAAHAARAGLPAWIFIPHDLEPAKVIATAVYGARVVRVRGTYDDVNRLCAQAADRFKW
                     GIVNVNLRSYYGEGSKTVAFEIAEQLGWRLPTAVVVPMAGGSLITKLRKGFREFLEAG
                     LVAGRSPRLFGTQAEGCAPIVRMVRDKTEVLQPVVPNTIARSLAIGSPADGIFASRVI
                     NESGGSAAAVSDEELSQGIRTLAETSGIFTETAGGVTVAGALALAASGHLRADDEVVL
                     CITGNGLKTTDAVSDTTRDLPLIPPKLRELSALVEQSA"
     gene            1877..2152
                     /locus_tag="VGQ24_12320"
     CDS             1877..2152
                     /locus_tag="VGQ24_12320"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HEV8455675.1"
                     /translation="MPVTFSLPTVLARLADGQATLEASGTTLGEVVAGVAERFPQLAP
                     RLQDERGGPYPFVAFYLNDEDARFRGGFQAPVTDGDEITVVAAISGG"
     gene            complement(2166..3248)
                     /locus_tag="VGQ24_12325"
     CDS             complement(2166..3248)
                     /locus_tag="VGQ24_12325"
                     /inference="COORDINATES: protein motif:HMM:NF017181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEV8455676.1"
                     /translation="MRIWVIFMAGLPGILGAQEAPRLTEVERVLAPLVESYGVSGMEE
                     PVRVTVQRMLPRWARTETDSAGNLWLTLGKGEPTVVFVAHLDEIGFRITGIREDGTLD
                     LTPAGGLFPSLWEGKPALVHTGRAIIPGIFMPRDSTAAADPKRTPPDLRADVGTASRA
                     ETAALGIRVGHTLTMPKGYVRLAGTRATGRSFDDRVGSAAQILAVRRLDPARLQHTVI
                     FLWSVREEIGLEGAEAAADALGLRPIRVHAIDTFVSADSPLESRNFAVAPLGRGAVAR
                     ALDNSSVTPPAQVDSLVALARSQGIPLQVGTTNGGNDGSVFAAYGVPDVPIGWPLRYS
                     HSPVETIDLRDLVSLAEIILAVAQRW"
     gene            complement(3245..4249)
                     /locus_tag="VGQ24_12330"
     CDS             complement(3245..4249)
                     /locus_tag="VGQ24_12330"
                     /inference="COORDINATES: protein motif:HMM:NF017181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455677.1"
                     /translation="MTGSHLSPLTSHLVISRWLGCGVILLFPGLAQAQQDHSGVAALA
                     IRLAALSAVTGYEQAMVDTVLRLLPGATRDRAGNARLQLGGGSVKRLVVCPLDEPGYV
                     VGSIREDGYLTLRRLAGRVSPLFDQQIEGQRVTIQGRGSVPGVVAVRSIHLTRGRSAP
                     SELPFTVDDAYVDVGAGSRSQVTALGVRVLAPVTLAKRPHAYGSGLLAAPAVGRRTAC
                     AALLLAVGRSMMRAKLIPQVTVAFAVEQELSQRGLGTLANELGPFDEAVLVDSRAGQR
                     GALEQEPDPGMTARWPGLGRVTRWSLPVRYAGTPVETVALADADSLRNALARWIGGDR
                     "
     gene            complement(4340..4657)
                     /locus_tag="VGQ24_12335"
     CDS             complement(4340..4657)
                     /locus_tag="VGQ24_12335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455678.1"
                     /translation="MLPAAIEQERLFVAERLLSEIERRHGLPRPAQRAIHPVILDRFL
                     TAYLPETRDGEPAPLALEYAFSPSLTEALDLLRGVVTESTTGCGAALYVYDLDTGILG
                     GGS"
     gene            complement(4814..5449)
                     /locus_tag="VGQ24_12340"
     CDS             complement(4814..5449)
                     /locus_tag="VGQ24_12340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEV8455679.1"
                     /translation="MSAASLGFVHRFRPGTRVGATPLLLLHGTGGNEDDLLSLGEALA
                     PEAPLLSPRGKVLENGMPRFFRRLAEGVFDLEDLRVRARELADFVAAARKVYDLGETP
                     PIAVGYSNGANIAGALLLLYPGSLSGALLLRPMVPLVPDPLPALNGVPVLIAMGRHDP
                     IVPASQPRALADLLGSAGAEVTLHGSNAAHGLTREDIDAGERWMHAVAAHG"
     gene            complement(5446..6396)
                     /locus_tag="VGQ24_12345"
     CDS             complement(5446..6396)
                     /locus_tag="VGQ24_12345"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-cleaving dioxygenase"
                     /protein_id="HEV8455680.1"
                     /translation="MGIHHITAIAGDPQRNLDFYTGVLGMRLVKLTVNFDDPASYHLY
                     YGDELGHPGSLLTFFPWPGGRPGRQGTGQVGTVSLAIPPSSLGFWVERLLAHGIRYEG
                     PTRRFDEQVLAFKDPDGLLLELVASPRVVNTPPWLEGPVPFEHAVRGLHGATLWEDGD
                     IGSADFLTRTIGFQPVGEEGTLLRFQSADLGSGTVVDLRRAPGFWRGAGGVGTVHHMA
                     FRADNDRAQLAKRAEIESQGVDITPVIDRQYFHSVYFREPGGVLFEVATDPPGFTIDE
                     PAAELGTHLKLPPVYEANRAELERLLPALQLPHAAAGQAR"
     gene            complement(6413..7426)
                     /locus_tag="VGQ24_12350"
     CDS             complement(6413..7426)
                     /locus_tag="VGQ24_12350"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEV8455681.1"
                     /translation="MIAALPTRPLGNSDLQLSTVGFGAWAAGGGGWAYGWGPQDDPAS
                     IASIRYALERGVNWIDTAAVYGLGHSEEVLRRALHDVALRERPYVFTKCGMVWDERDR
                     SAAPRQVLSPQSIRAECEASLRRLGLERIDLYQIHWPDQSGTPVEESWATMVRLVDEG
                     KVRAIGVSNFGVDLLERCEAIRHVDSLQPPLSLLRRQALEAEVPWCAAHGTGVIVYSP
                     LQSGLLTDSFSQTRIDSLAEDDWRRRSADFKPPRLKRNIALRDALRPIAQRHGTTVSA
                     VAIAWTLAWPGVTGAIVGARSPEQVDGWIGAATLELTLEDLDEIALAVGRTVAGSGPA
                     LPK"
     gene            7472..8881
                     /locus_tag="VGQ24_12355"
     CDS             7472..8881
                     /locus_tag="VGQ24_12355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEV8455682.1"
                     /translation="MIEGKSAAGAAPPAGRSTTYVPRLGLFSGTMMVVGGIIGSGIFL
                     NPAIVAARVRSAGMTLAVWVLGGVVALIGALVYAELGARRPVAGGGYVYLRDAFGRLP
                     AFLYAWTLLLVIATGAIAAVAVTFATYAASLLGMGSAARVPLAVGAIVLLSAINYVGV
                     KPGAVTQNVLTLLKLAALAVLIIAGLLLPHPTASAAQMTSLPGGSVVLAVGAALVPVL
                     FAFGGWQQTNFIAEELIEPERNLPRALLAGVTIVVAVYLLANMAYLRTLGVDGLAAST
                     APAADAMRALLGAPGAALIAAGIAVSTFGFLNLVILVSPRVYRAMAADGLFFPSLARL
                     HPRYRTPTAAILFQGAWAIILTLTGRYGDLLDYVVFGDWIFFAATASTLFYFRTRERG
                     GLERADVRFRMPGYPAGPILFLLAALYVVIGSIASNPVNAVKGTALMAVGVPVFLFWD
                     RKKPSPSSPPSPSFPRRHA"
     gene            complement(8784..9896)
                     /locus_tag="VGQ24_12360"
     CDS             complement(8784..9896)
                     /locus_tag="VGQ24_12360"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEV8455683.1"
                     /translation="MAFLDTKQDRAAFLIFVLGLGLVWALWPFSTGLVGAPVLYIVFA
                     PVHRWLARQMHPRLAAALVVLMGVIVVLGPGAAFVGVIAGEAQDIASGVIRSPLLARL
                     RELRIGPYDVGAQIESLGSRLVAWIGASALGLIGTATRLGIQLTITFFGLYYLLLAPI
                     TAWKGVRPFLPFSARNAERLRDRFRDVTISTLIGTGMTAAMQGFLVGLAFWATGIPNA
                     LFWGVVTVILAILPVVGSGLVWAPGVLALAIEGRYGAAIGLALWGVLVVGNVDNIIRP
                     MVFRRWAQIHPFITIIGAFAGINYFGLLGLIIGPLAISYFFELIRMYREEYLQDEDAA
                     EVIPIKHGGEEKTERAEKMERASFYPKTEKPAPPQP"
     gene            10007..>12307
                     /locus_tag="VGQ24_12365"
     CDS             10007..>12307
                     /locus_tag="VGQ24_12365"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEV8455684.1"
                     /translation="MVPLSQIPGTLFIAGGAAAALLLLLTVLAVREHRTRRRVERSLA
                     EVRSQLQTVTATMREAVIAYDMDQRLKFINPAFERLTGYPDEELRDQEFLSYIHAEDR
                     SALLAEWDRLAQGGALRDQEYRVVTRFGQIRWCSSSWEPMRDETGRQIGDLGTEFDIT
                     ERKLAEEAMRLDTELFQAVLEVEQAVTAAGLDSGTVMRVIAERSKGLTGASGAVIEEI
                     EGEDLIPIVYVGTEAARLKVSTSLSGVCIRTGEVQRSDDTFTDPRVAHNYYREIGIRS
                     LLAVPLLDEHRTLGVLKVVSPQPRAFTERDAKALRLLGGLMGAALGHAAAFEGRQARL
                     EERTRALQESEQRFKQLVDVAQEGIWVTDDRGVITYVNQRLADLLGYSNGALLGRPVY
                     DFVEADSQPGARRTLSRGRSASQSQDLRFRRHDGTQLWGLVSSSPILGKDGVLVGTVG
                     MVTDITERKRAEDQLRRAADRLTMLHDMDQAILAAQSPVEIGRAALGRVRRMVPCQRC
                     TVTLFDFVQGQAQLLAGYAGGTHLPPASMPLSDLSPPEVLRGGSVRDIEDLNTVQDPP
                     SHARLLLAEGMRSVLAVPLLVEGEAIGEISLASSTPAAFDAEHRDIALEVATPLAIAI
                     QQARLREEMSRQQGELERRLAERGAAMRATTTELETLLYSVSHDLRAPLRQLIGFSRQ
                     LLDESGQRLDPAGLHYAERIHEAADHMATLVEDLIGLSRIGRQDLFRREVKLATLVED
                     VVNGLPPTDGRVIDWEVEELPTVQCDP"
BASE COUNT         2139 a         4086 c         4071 g         2011 t
ORIGIN      
        1 gacgtacccg tccggggcaa cggtaattcc atggggaccc gatcccggtg tgggcgtgga
       61 gtagtccaca atcttcccgc tcgatggatc gaggtggccg atgtagctat tccgctggtc
      121 ggtgtaccac acggtgccgt ccttggcgac ggccgggtcg tggggaaagt tgcccggacg
      181 cgggatgacg tactcgacca cggcaggcgg gatggtagga gccgggacgg cgaccagggc
      241 cgcgacgaag ccggcctgaa acaggacatt tactcgcatc acaacctccg gatagcgcgg
      301 cagaacgtca ggtgaggaag cacctacaaa actgacggcc ccctcagctg caaggtttcc
      361 cggccttcac cgggtcttgc gtctgccggt acgctgtagt agtctagctt tgataactgc
      421 tcccgtggtg atttgcggcg tattgcagcc acgttaaaca attgctaaaa ggcctcgcgt
      481 cccgagtgtc tttttggcac cgggcgcttt tcatttggcc cgggccaaag atatcgaggg
      541 cgtagaaggc gggaaggatt ccgacatgcc gggcgctccc agcggaaccg cgctcctcga
      601 cccacctgtc tctccctccg gagcgagcga aacactccgc gttcttccac tgcactgtgc
      661 ggtgtgcggg gcggagtacg cccccgctcc ggtagcgatc tgcgaacggt gcctgggccc
      721 gctcgagccg gtctattccc ccacccgggc attgcccgat tccgcagcca tctcgcgccg
      781 cgaccactcg ctctggcgct accgcgagtt tctcccgatt gaagggcgta tctgttactc
      841 cctcgacacc gggatgaccc cgctggtgga gtcccctgcc ctggcgcggc ggctgggtgt
      901 cgctcgagcc tggctcaaga acgacagtgt ctcccacccg actctctcct tcaaggaccg
      961 cgtggtcgcg agcgccatca acgcggccca ggctctggga ctcgacacca tcgcctgcgc
     1021 ctccaccggg aatctggcca acgcgaccgc ggctcatgcc gcccgcgccg ggctgccggc
     1081 ctggatcttc atcccccacg acctcgagcc ggccaaggtc atcgcgacgg cggtgtacgg
     1141 cgcgcgggtg gttcgggtcc gcggcaccta cgacgacgtg aatcgcctct gtgcccaggc
     1201 cgccgatcga ttcaagtggg gcatcgtcaa cgtgaacctg cgcagctatt acggcgaggg
     1261 ctccaagacg gtcgccttcg agatcgcgga gcagctcggg tggcgcctcc ccacggccgt
     1321 cgttgtgccg atggcgggcg gctcgctgat caccaagctt cgcaagggat tccgcgagtt
     1381 cctcgaggct ggcctggtag cgggccggag tccccgcttg ttcggcaccc aggccgaggg
     1441 gtgtgccccg atcgtgcgca tggtgcggga caagaccgag gtgctgcagc ccgtcgttcc
     1501 caacaccatc gcccgctcgc tcgcgatcgg gagcccggcc gacgggatct tcgcgtcccg
     1561 cgtgatcaat gaaagcgggg gctctgcggc ggcggtctcg gatgaggagc tgtctcaggg
     1621 aatccggact ctggcggaga cgagcggaat cttcaccgag acagctggag gggtgacggt
     1681 cgccggtgcg ctcgcgctcg ccgcgagcgg gcacctgcgg gccgacgacg aggtggtgct
     1741 ctgcattacc ggcaacggcc tcaagactac cgatgccgtc tccgatacaa cccgtgatct
     1801 gccgctcatc ccgcccaagc tccgggagct ctcggcgctg gtggaacagt cggcctgacc
     1861 caggaggacg tgcgccatgc cagtgacttt tagtctaccg acggtgctcg cccgcctcgc
     1921 cgatgggcag gcgaccctcg aggcgagcgg aacaactttg ggagaagtgg tggcaggggt
     1981 cgccgagcgg ttcccccagc tcgccccgcg attgcaggac gagcgcggcg ggccctatcc
     2041 cttcgtggcg ttctatctga acgatgaaga tgcgcggttc cgcggcgggt tccaggcgcc
     2101 ggtgaccgat ggcgatgaga tcaccgtagt cgcggcgatc tcggggggct gagcagttcg
     2161 agcggttacc agcgctgcgc cacagcgagg atgatctcgg ccaggctgac gaggtcacgc
     2221 agatcgatcg tttcaaccgg cgagtgggag taacgcagcg gccagccgat cggcacgtcg
     2281 ggcacgccgt acgccgcaaa caccgaccca tcgttgccgc cgttggtggt ccccacctgc
     2341 aggggaatcc cttgcgatcg tgccagcgcc accagcgagt ccacctgagc cggaggcgtc
     2401 accgagctgt tgtccagggc acgggccacc gcgccacgcc caagtggggc gacggcgaaa
     2461 ttccgggact cgagcgggct atcggcactg acgaaggtgt cgatcgcatg cacccgaatc
     2521 ggccgaagac cgagcgcgtc ggccgcggcc tccgcaccct ccagcccgat ctcctcccgc
     2581 acactccaga gaaagatcac tgtgtgctgg agccgggcgg gatcgagccg cctcactgcg
     2641 aggatctgtg cggccgagcc caccctgtca tcgaacgagc gcccagtggc acgggtcccg
     2701 gccaggcgga cgtaaccctt cggcatggtg agggtgtgcc ccacccggat acccagcgcc
     2761 gcagtctcgg ccctggaagc ggttcccacg tcggcgcgga gatcgggcgg ggtgcgtttc
     2821 gggtcggcgg ccgcggtgga atcgcgcggc atgaagatcc cgggtatgat ggccctcccc
     2881 gtgtgcacca atgcgggctt cccttcccat aacgaaggaa agagcccacc ggccggggtc
     2941 aggtcgagcg tgccatcctc ccggatgcca gtgatgcgaa acccgatctc atcgaggtgg
     3001 gcgacgaaga ccacggtggg ctcgcccttc cccagggtaa gccagaggtt gccggcgctg
     3061 tcggtttccg tccgggccca tcgcggaagc atccgctgga ccgtcacacg aacgggctct
     3121 tccatgcccg agacaccata gctctcgacc aaaggcgcga gcacccgttc cacctcggta
     3181 aggcggggtg cttcttgcgc gccgagtatc ccgggcagac ccgccatgaa aatgacccag
     3241 atcctcaccg gtctcctccg atccaccgcg ccagggcgtt acggagcgag tccgcatcgg
     3301 ccagagcaac cgtctcgacc ggggtgccgg cataacgaac ggggagagac catctcgtca
     3361 cccgtcccag accaggccag cgggccgtca tgccgggatc cggttcctgc tcgagtgcac
     3421 ccctctggcc ggctcggctg tccaccagga cggcttcatc gaacggtcca agttcgttcg
     3481 ccagcgtgcc gaggccccgc tgggagagct cctgctcgac ggcgaacgct accgtcacct
     3541 gagggatgag ctttgcgcgc atcatcgatc gccccacggc cagcagcaac gccgcgcagg
     3601 ccgtgcggcg gccgaccgcg ggagcagcca gcaagccact accgtaagca tggggacgct
     3661 tggccagggt gactggtgcg agcacccgca cgcccagagc ggtgacttgt gaccgggagc
     3721 ccgcgccaac atcgacgtac gcatcatcga ctgtgaaggg aagctcgctc ggtgcgctcc
     3781 ggccgcgagt caggtgaatc gaacgcaccg ccacgacacc gggcaccgat ccacgaccct
     3841 ggatagtgac gcgctgaccc tcgatctgct gatcgaaaag cggcgacaca cgaccggcca
     3901 gccgtcgcag cgtcaggtag ccatcctccc tgatgctgcc cacgacgtat cccggctcgt
     3961 ccagggggca gacgaccagc cgcttcaccg atccgccacc gagttgaagg cgtgcattgc
     4021 cggcgcggtc acgggtagcg ccgggcagga gacgaagcac ggtgtccacc atggcctgct
     4081 cgtatccggt gaccgccgag agcgcggcca gacgaattgc cagggcggcg acgccagagt
     4141 gatcctgctg cgcctgcgcc agaccgggga agagcaggat gacgccgcaa cccagccagc
     4201 gagagatcac gaggtgagag gtgagaggtg agaggtgaga acctgtcatt ctgagcgaag
     4261 cgaagaatct agcccgctca ggacaggctc tcactccgct cggaacgaca agtttgcgtc
     4321 cggaacaacg gcgaccaacc tatgatcccc cacccaaaat gccggtatcg agatcataaa
     4381 cgtacagtgc ggcgccacat ccggtggtgg attcggtcac taccccccgc aggaggtcca
     4441 gtgcctcggt caggctgggg gagaaggcgt actcgagcgc gagcggcgcg ggctccccat
     4501 ctctggtctc agggagatag gcggtaagga atcggtcgag gatgacgggg tgaattgcgc
     4561 gttgagcggg acggggcagg ccgtggcggc gttcgatctc ggacaggagg cgctcggcca
     4621 cgaagaggcg ctcctgttca atggcggcag ggagcatcac atacttcctc aattggaatc
     4681 gccgccgcct ggcgcgcgac ggcaagtgaa atgggcgggc ggcgccagac gcctcgcgac
     4741 cgcggcacgc ggcgacttgt gtaccaatgc gaaagaccgg gaaccggcgt aagagaagaa
     4801 agaccgaatc gggttagcca tgcgccgcca cggcgtgcat ccagcgctcg ccggcgtcga
     4861 tatcctcccg cgtgagccca tgagctgcgt tgcttccgtg cagggttacc tccgctccgg
     4921 ccgagcccag gaggtccgca agtgcgcggg gctgagaggc tggcacgatc ggatcgtgcc
     4981 gccccatcgc gatcaggacc ggcacgccgt tcagggccgg cagcggatcg ggcaccagcg
     5041 gcaccatcgg gcggaggagg agagccccac tcaagctgcc gggatagagc agcaacagtg
     5101 ctcccgcaat gttggccccg ttggaataac cgaccgcgat cggtggcgtc tcacccaggt
     5161 catagacctt tcgggccgcg gccacgaagt cggccagctc gcgagctcgg acgcggaggt
     5221 cctcgagatc gaagacgccc tccgccagac ggcggaagaa ccgcggcatg ccgttttcca
     5281 gcaccttccc ccgcgggctc agcagaggag cttccggcgc cagcgcctcg cccagcgaaa
     5341 gcagatcgtc ctcgttgccg ccggtaccat gcagaagaag cagcggcgtc gccccaaccc
     5401 tggttcccgg gcggaagcga tgaacaaagc cgagactggc ggcactcatc tcgcttgacc
     5461 ggccgcggcg tggggcagtt gcagcgcagg cagcagtcgc tcgagctcgg ccctattggc
     5521 ctcgtagacg ggcgggagct tgagatgggt tcccagctca gcagcgggct catcgatggt
     5581 gaacccgggc gggtcggtgg ctacctcgaa caggacgccc ccgggctccc ggaagtacac
     5641 cgagtggaaa tactgccggt cgatgaccgg cgtgatgtcc acgccctgac tctctatctc
     5701 ggcccgtttg gccagttggg cgcgatcgtt atccgcgcgg aaggccatgt gatgcaccgt
     5761 gccgacccct ccggcgccgc gccagaagcc aggcgcgcgc cggagatcca ctaccgtgcc
     5821 gcttcccagg tcggcagact gaaaacgaag aagggtccct tcttccccga cgggctggaa
     5881 accaatcgtt ctggtgagga aatcagccga gccgatgtcg ccatcttccc acagggtggc
     5941 gccgtgcagc ccgcggacgg catgctcgaa gggcactggc ccctcgagcc atggaggagt
     6001 gttgacgact cggggcgagg cgaccagctc cagcagcagt ccatccggat ccttgaaggc
     6061 caggacctgc tcgtcgaatc gccgcgtggg cccctcgtac cggatgccgt gagcaagcaa
     6121 ccgttcgacc cagaacccca gcgagctggg cgggatcgcc agcgacaccg tcccgacctg
     6181 cccggtgccc tgacgtccgg gccgtcctcc cggccaggga aagaacgtaa ggagggatcc
     6241 cgggtgcccg agctcgtcgc catagtagag gtggtagctg gccggatcgt cgaagttcac
     6301 cgtcagcttg accagccgca tcccgagtac gccggtgtag aaatcgagat tgcgctgagg
     6361 gtcgcctgcg attgcggtga tgtgatggat gcccacgatc gatctcctct acttatttgg
     6421 gtagcgccgg accggagccg gccacggtcc gtcctacagc cagagcgatt tcatccaggt
     6481 cctcgagcgt gagctcgagc gtggccgcgc cgatccatcc atccacctgt tccggcgagc
     6541 gtgcccctac gatggctccg gtgacgccgg gccaagcgag ggtccaggcg atcgcgacgg
     6601 cgctcaccgt ggtcccatga cgttgcgcaa tgggccggag tgcatcgcgg agggcgatgt
     6661 tccgcttgag gcgcggcggc ttgaaatccg ctgaccggcg ccgccaatcg tcctccgcca
     6721 gcgagtcgat ccgggtctgc gagaagctgt cggtcaacag cccggactgg agcggactgt
     6781 acacgatgac gccggtccca tgggcggcgc accagggtac ttcggcctcg agcgcctgcc
     6841 gccggagcag ggagagcggc ggctgcagcg agtccacgtg ccgaatcgcc tcgcaacgct
     6901 cgagcaggtc gacgccgaag ttcgagacgc cgatggcccg gaccttcccc tcatccacca
     6961 gccgtaccat tgttgcccag gactcctcca ccggcgtgcc gctctggtcg ggccagtgga
     7021 tctggtagag atcgattcgt tcgaggccca gacgacgaag cgaggcctca cactcggcac
     7081 ggatcgactg cgggctgagg acctggcgcg gggccgccga ccgatcccgc tcgtcccaca
     7141 ccattccgca tttggtgaat acgtaaggcc gctcccggag ggcaacatcg tggagggctc
     7201 ggcgtaggac ttcctccgag tgtcccagtc cgtacacggc ggccgtgtcg atccaattga
     7261 ctccgcgctc gagggcgtat cggatgctgg cgattgatgc cggatcatcc tgcggccccc
     7321 agccgtaggc ccagccgcct ccgccggcgg cccaggcgcc gaacccaacg gtgctgagct
     7381 gaagatcgct gttcccaaga ggtcgggtcg gaagggccgc tatcatcttt gccataatca
     7441 ggctggcaga tggccaggag aagaccggat catgattgaa ggtaaatcag cagctggagc
     7501 cgcgccgcca gcggggcgat ccaccacgta cgtgccacgg ttgggactct tctcgggcac
     7561 catgatggtg gttggcggta tcatcggctc cggcatcttc ctcaaccctg ccattgtcgc
     7621 cgcgcgggtt cgttccgctg gtatgacgct ggcagtctgg gttctgggtg gagtcgttgc
     7681 gttgattggg gcgctggtct acgccgagct cggagcccgg cgtccggtgg ccggcggagg
     7741 ttacgtgtac ctgcgtgatg cctttggccg gctccccgca ttcctctacg cctggaccct
     7801 gttgctggtg attgcgaccg gggcgattgc ggccgtggcc gtgaccttcg caacctacgc
     7861 ggcctctctc ctcgggatgg gatcggcggc gcgagtgccg cttgcggtcg gcgccatcgt
     7921 cctgctctcc gccataaact acgtcggcgt gaagccgggg gcggtgaccc agaatgtgct
     7981 cacgctgctc aagctggccg cactggcggt cctcatcatc gcggggctgc tgctaccgca
     8041 cccgaccgcg tccgccgctc agatgacctc gctgcctggg ggcagcgtgg tactggcggt
     8101 cggggcggcc ctcgtcccgg tgctgtttgc cttcggcgga tggcagcaaa ccaacttcat
     8161 tgcagaggaa ttgatcgagc cggagcgcaa cctgccccgg gcgctcctgg caggagtgac
     8221 gatcgtcgtt gccgtctacc tgctggccaa catggcctac ctgagaaccc tcggagttga
     8281 tggcctggcg gcaagcaccg cgccggcagc cgatgccatg cgggccttgc tcggtgctcc
     8341 gggagcggcg ctgatcgcag cgggaattgc agtctcgacc tttggatttc tgaacctggt
     8401 gatcctggtt tctcccaggg tctatcgagc catggcggcc gacggcctct tcttccccag
     8461 cctcgcacga ctgcacccgc ggtaccgcac gcccacggcc gccatcctct ttcagggcgc
     8521 ctgggccatc atcttgaccc tcaccggtcg atacggcgac ctgctggact atgtcgtgtt
     8581 cggcgactgg atcttcttcg cggcaactgc ctcgaccctc ttctactttc ggactcgcga
     8641 gcggggcggg ctggaacgcg ccgatgtgag gttcaggatg ccagggtatc cggccggacc
     8701 cattctcttc ctgctcgcag ccctctacgt cgtcataggg tcgattgcct cgaacccggt
     8761 taatgcggtc aaggggacgg cgctcatggc tgtgggggtg ccggtttttc tgttttggga
     8821 tagaaagaag ccctctccat cttctccgcc ctctccgtct tttcctcgcc gccatgcttg
     8881 atcgggatca cctccgccgc gtcctcatcc tgcaaatact cctcccggta catccggatc
     8941 agctcgaaga agtaggagat cgccagcggc ccgatgatca ggcccagcag gccgaagtag
     9001 ttgatgccgg caaaggcccc gatgatggtg atgaaggggt gaatctgggc ccagcgccgg
     9061 aagaccattg gccgtatgat gttatccacg ttccccacaa ccaggacgcc ccagagggcc
     9121 aatccgatcg ccgccccgta acggccctcg atggctagtg ccaagacacc cggcgcccaa
     9181 accagtccgc tccccaccac gggaagaatg gccagaatga cggtcaccac tccccagaac
     9241 agggcgttgg gtatgcctgt agcccagaac gccaagccaa ccagaaatcc ctgcatggcg
     9301 gcggtcatgc cggttccaat gagcgtcgag atggtgacgt cccggaaccg gtcccgcagt
     9361 ctctccgcat tcctggcgga gaacgggagg aatggccgga cacctttcca tgccgtgatg
     9421 ggggcgagaa ggaggtaata caaaccgaag aatgtgatgg tcagctggat gccgagccgg
     9481 gtagcggtgc cgatcagccc cagcgcgctg gcgccgatcc acgccaccag gcgggacccc
     9541 aacgactcga tctgcgcccc cacatcgtag ggtccgatcc gaagctcccg aaggcgggcg
     9601 agcagggggc tccggattac tccgctggct atgtcctggg cctcccccgc gatcacccca
     9661 acgaaggccg cgccgggtcc caagaccacg atcacaccca tcagcaccac cagcgcggcc
     9721 gcgagccggg ggtgcatctg ccgggcaagc caccggtgga ccggcgcgaa gactatgtag
     9781 aggacgggcg cgccgaccag gccggtgctg aaaggccaga gcgcccagac caggcccaac
     9841 cccaacacga agatcaggaa ggctgcccgg tcctgcttgg tgtcgagaaa cgccatcggg
     9901 gaacagtatg gcggaaggga agcggtcgcc agcgtgggag tcctaacggg gaggcctacg
     9961 gagatgtatc ttcggagaag tctgactcca accctgtaca ggactcgtgg tcccactcag
    10021 ccagatccca ggcactctct tcattgccgg cggcgctgcc gcagcgctgc tcctgctcct
    10081 gacggtcctt gccgtgcggg agcaccggac ccgccggcgg gtcgagcgct ccctggccga
    10141 agtccggagc cagctccaga ccgtcaccgc gaccatgcgc gaggcggtta tcgcctacga
    10201 catggaccag cggctcaagt tcatcaatcc cgcgttcgag cggctcaccg gctacccgga
    10261 tgaggagctc cgggaccagg agttcctctc ctacatccat gccgaggacc ggtcggcgct
    10321 cctggccgaa tgggaccgtc tcgcccaggg tggtgccctc agagatcagg aatatcgggt
    10381 ggtcacccgg ttcggccaga tccgctggtg ctccagctcc tgggagccga tgcgggatga
    10441 gaccggccgg cagatcggtg acctgggtac ggagttcgac atcactgaga ggaagctggc
    10501 tgaagaggcg atgcgactgg atacggagct cttccaggcg gtgctcgaag tggagcaggc
    10561 cgtcacggcg gcgggtctcg actccgggac ggtcatgcgt gtcatcgcgg agcggagcaa
    10621 ggggctcacc ggggccagtg gagcggtcat cgaggaaatc gagggggaag acctcatccc
    10681 aatcgtgtac gtcggcaccg aagcggctcg cctcaaggtg agcacaagcc tgtccggcgt
    10741 ctgcatccgc accggagagg ttcagcgcag cgacgacacc ttcactgacc cgcgggtggc
    10801 ccataactat taccgcgaga tcggcatccg ctcgttgctg gcggtgccgc tcctggacga
    10861 gcaccggacc ctcggcgtgc tcaaggtggt ctctccccaa ccgcgagcct tcaccgagcg
    10921 cgatgccaag gcactccgcc tgctcggcgg cctcatgggc gcggcgttgg gtcatgctgc
    10981 cgcattcgag ggacgccagg cgcggctgga agagcgtacc cgcgcgttgc aggagagcga
    11041 gcagcgtttc aagcagctgg tagacgtcgc ccaggagggc atctgggtca cggacgatcg
    11101 cggggtcatc acctacgtga atcagcgcct cgccgatctg ctggggtaca gcaacggcgc
    11161 cctgctcggc cgacccgtct acgacttcgt cgaggccgac tcccagcccg gtgccaggcg
    11221 tactctgagc cgcggacgaa gtgcgagtca gagccaggat cttcgcttcc ggcgccatga
    11281 cggaacccag ctctggggtc tggtgtcgtc gagcccgatc cttgggaagg acggagtgct
    11341 ggtgggaacg gtaggcatgg tcaccgacat aaccgagcgg aagcgggctg aggatcagct
    11401 gcgccgcgcc gccgaccggc tgaccatgct gcatgatatg gatcaggcga tcctcgcggc
    11461 gcagtcgccg gtcgagatcg gacgcgcggc cctgggacgg gtccgccgga tggtgccgtg
    11521 ccagcggtgc accgtgactc tgttcgactt cgtacagggc caggcccagc tcctcgcggg
    11581 gtacgccggc ggaacccact taccgccggc atcgatgccg ctgagcgacc tctcgccccc
    11641 cgaggtgctc cggggcggat cggtccgcga tatcgaggac ctcaacaccg tacaagaccc
    11701 cccgtctcac gcccgcctgc tcctggccga agggatgcgg tcggtgcttg cagtgcctct
    11761 gctggtggaa ggagaggcga tcggagaaat cagcctcgca tcatctacgc cggctgcctt
    11821 cgatgccgag caccgggata tcgcgctcga ggtcgccact ccgttggcca tcgcgattca
    11881 gcaggcacgc cttcgcgaag agatgtcgcg gcagcaaggc gagctggagc gcaggctggc
    11941 cgagcgcggt gccgcgatgc gcgccaccac gacggagctg gagaccctgc tctactccgt
    12001 ctcccacgac cttcgcgctc cattacgcca gctgatcggc ttctcccgcc agctcctcga
    12061 tgagtcgggc cagcggctcg acccagcggg tctgcactac gcggagcgga ttcacgaggc
    12121 ggcagatcac atggctacct tggtggagga cctcatcggt ctctcccgga tcgggcgcca
    12181 ggatctgttc cggcgcgagg tgaagctcgc gacgctggtg gaggacgtgg tcaacgggct
    12241 ccctcccaca gacggccggg tcatcgattg ggaggtcgag gagctgccga ccgtgcagtg
    12301 cgatcca
//
LOCUS       DASYRV010000461         1936 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1026039, whole genome shotgun sequence.
ACCESSION   DASYRV010000461 DASYRV010000000
VERSION     DASYRV010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1936
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1026039"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1262
                     /locus_tag="VGQ24_12370"
     CDS             <1..1262
                     /locus_tag="VGQ24_12370"
                     /EC_number="1.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HEV8455685.1"
                     /translation="SGLVVKDKFIVGVSGGEFGIRGWVAAYDLNSGRQVWKAYSMGPD
                     EDIKLAPDFNQANPHYGRFGEGTRTWPGERWRNGGGSTWGWYAYDPALNLFYYSTGNP
                     GTWNPSVRQGDNKWSVSIFARDPDTGVAKWAYQMTPWDAWDYDGINEHVLVDLTVGGK
                     PVKALVHFDRNGFAYVLDRTNGTLLSAEKFVPSTNWAERIDLKTGRPVENPSKRTKQG
                     VNTKDICPAAMGGKNQQPVSFSPRTNLIYAGTNNLCMNYEGVEVKYIAGAPYVGANVR
                     IFPAPGGYLGEFLAWDPAAGKKVWGIKEPFPVWTGTLVTAGDVVFYGTMDGWFKAVNA
                     KSGAPLWKSKLPSGSIANPITFVGPDRKQYVAIYSGIGGWFGLPIAGNLSREDPLAAL
                     GAVGAAYEAGLDKVTSVGGTLHVFALE"
     gene            1379..>1936
                     /locus_tag="VGQ24_12375"
     CDS             1379..>1936
                     /locus_tag="VGQ24_12375"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEV8455686.1"
                     /translation="MSRTFKRLAAPLVAYALLVGTVSTQSKSLRVCGDPDNLPFSNDK
                     LEGFENKIAAVIAAELGAAPSYAWWPHQRGLVRNTIEAGTCDVIFGVPEGLDLVLWTK
                     PYYRSSYVIAYRKDAGYRITSLDAPELKRLRIGVFANTPVEESLARRSLLNNVSTYSL
                     FFDPRGPGDRPLKLLADLVAGTVDVA"
BASE COUNT          362 a          610 c          612 g          352 t
ORIGIN      
        1 tgtccggcct cgtggtcaag gacaagttca tcgtcggcgt ttcgggtggt gagttcggca
       61 tccggggctg ggtggcagcc tacgatctca actcgggccg ccaggtgtgg aaggcttaca
      121 gcatgggccc ggatgaggac atcaagctgg cgccggactt caaccaggcc aatccccatt
      181 acggccgctt cggcgagggc actcggacct ggccgggtga gcgctggaga aatggcggtg
      241 ggagcacctg gggctggtac gcgtacgatc ccgcgctcaa cttgttctac tactccaccg
      301 gcaaccccgg gacctggaac ccgtcggttc gccagggcga caacaagtgg tcagtctcga
      361 tcttcgcgcg ggaccccgac acgggcgtgg cgaagtgggc ataccagatg acgccgtggg
      421 acgcatggga ctacgacggg atcaacgagc acgtgctggt tgacctcacc gtcggcggga
      481 aaccagtgaa ggcgctcgtt cacttcgacc gcaacggttt cgcctacgtt ctggaccgca
      541 cgaacggtac cctgctctcg gccgagaagt ttgtgccgtc gaccaactgg gccgagcgca
      601 tcgatctgaa gacggggcga cccgtggaaa acccgtccaa acgcaccaag caaggcgtga
      661 acacgaagga catctgcccg gccgccatgg gcggcaagaa tcagcaaccc gtgtcgttct
      721 cgccgcgaac aaacctgatc tatgcaggca cgaacaacct gtgcatgaac tacgagggcg
      781 tcgaggtgaa gtacattgca ggcgctccgt acgtgggcgc gaacgttcgc atcttcccgg
      841 caccgggcgg ctatctcggc gagttcctcg catgggatcc ggccgcgggc aagaaggtct
      901 ggggcatcaa ggagccgttc cccgtctgga ccggcacgct ggtaaccgca ggtgacgtgg
      961 tgttctacgg tacgatggac gggtggttca aggcggtgaa cgcaaagagc ggcgcacccc
     1021 tgtggaaatc gaagctcccg tcgggttcca tcgcgaaccc gatcaccttc gtcggaccgg
     1081 accgcaagca gtacgtcgcg atctactccg gaatcggcgg ctggttcggc ctgcccatcg
     1141 cggggaacct ctcgcgcgag gatccgctcg ctgcgctcgg tgcggttggc gccgcttacg
     1201 aagcggggct cgataaagtg acctccgtag gtggcacact gcacgtcttc gcgctcgagt
     1261 aaccccctcc tcgttgcccg gcgcggatgg ggagatcacc cgcgccgggc tttgacctcg
     1321 gtcgccctcg gaaacgggcg atgacgccaa tgatcggatc ggagaaaccg aggcttccat
     1381 gagccggact ttcaagaggc ttgcagcacc gctcgtggcc tacgctttgc tggttggaac
     1441 cgtgtccacc cagtccaagt ctcttcgcgt ctgtggcgac cccgacaacc tgccgttctc
     1501 caacgacaag ctcgaaggct tcgagaacaa gattgcagcg gtaatcgccg ccgagctcgg
     1561 cgccgcgcca agttacgcct ggtggccgca ccagcgcggt ctcgtgcgga acaccatcga
     1621 ggcgggcacg tgcgacgtca tattcggggt tcccgaaggt ctcgacttgg tactatggac
     1681 gaagccctac taccgctcgt cctatgtcat cgcctatcgc aaagatgctg gctatcgcat
     1741 cacatcattg gatgcgcctg agctaaagcg tcttcggatc ggcgtatttg ccaacacccc
     1801 cgtggaggaa agcctggccc ggcgcagtct cctcaacaac gtttcgacgt attcactctt
     1861 tttcgatcct cgcggccctg gggatcggcc cctgaagctc ctggccgacc tggtcgccgg
     1921 taccgtggac gtggct
//
LOCUS       DASYRV010000462        10752 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1640295, whole genome shotgun sequence.
ACCESSION   DASYRV010000462 DASYRV010000000
VERSION     DASYRV010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10752
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1640295"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(284..724)
                     /locus_tag="VGQ24_12380"
     CDS             complement(284..724)
                     /locus_tag="VGQ24_12380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455687.1"
                     /translation="MTATVASDIKDNAGRVVIPAGSEVILKVTAIKESENKRDKTGTL
                     TLQPSSVMVNGTSYPISARIDSVGTHLEGRKTGAGDIAKPAAGAAVGAVVGRVLGGST
                     KGAIIGGVLGGAVGAQRAVETKDRDVVLPQGTTVVLVLEQPFKS"
     gene            699..1079
                     /locus_tag="VGQ24_12385"
     CDS             699..1079
                     /locus_tag="VGQ24_12385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455688.1"
                     /translation="MSLATVAVTVSPTLFFAELTSAVVEALRVVPADRLRLAAGAGGA
                     AADGLGEGLLGDAAGRLGRVAVFPAGAGALAVGRSFSGTVVSTGASCRSRLRLSAAAV
                     SLLSPRPQAATAANVSAAIIVLDI"
     gene            1137..2921
                     /locus_tag="VGQ24_12390"
     CDS             1137..2921
                     /locus_tag="VGQ24_12390"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEV8455689.1"
                     /translation="MNELRSLLPYFRPYRLAFVAGLALVVISNYFAIKGPRFLQHGID
                     ALKTGGRFAEVQTAVVLLLAVALASGVARYGMRELLNSGSRRVETDLRNQLYDHLQRM
                     SAEFYDRYPTGDVMARTTNDLLAVRMVAGPALMYLVDTTIRTLLIAPVMLAISPRLTL
                     LALLPLLGLPAAMVLLGRVIHQRTQAIQAQFSELTSHAHENLSGVRVVRSYRQESAET
                     AHFRALNDTYKERNLGLARVQGSFFPLLSLLGGLSGLTVLYAGGALVMSGAVTVGEFV
                     AFGVYLAMLVWPMIALGWAVNLVQRGAASMGRINELFRETPAITGAASPVALPPVAGA
                     RALEFRNVWFSYPGPHARGWVLQDISFRAEPGSSLAIVGATGSGKSTLVDLIVRTYDP
                     DRGAVLIDGVDVRALSLEELRRAVGFVPQETFLFGETLRRNILLGAPDDGRLERVSDI
                     AQLTEALPALPEGYDTLLGERGINLSGGQKQRTAIARALAQDPPLFVLDDALSAVDTN
                     TEARILAGLRDALAGRTSIIVSHRLVAVRDADLILVLDGGRIVERGTHAELLAAGGRY
                     WELLRRQQMEEELETENVGLEKSVNSEQ"
     gene            complement(2975..3703)
                     /locus_tag="VGQ24_12395"
     CDS             complement(2975..3703)
                     /locus_tag="VGQ24_12395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcdA"
                     /protein_id="HEV8455690.1"
                     /translation="MSEPAALGFVVAFAAGLLSFLSPCVLPLVPSYVGFLTGMTLPEV
                     SGRRRVALTHALLFVGGFSLVFILLGASATALGRALNYYQVWLQRVGGALIILFGLFC
                     LGVFNPRLLSQERRLHLERKPVGYLGSVLVGMAFAAGWTPCIGPVLGGILGLAATSTD
                     VSRGMLLLAVYSAGLALPFLVAAVAVDSFLDWFQRFRRFLPWVMRVSGVMLVFVGILL
                     LTGEFTRLAGWLQGLTPDFLREQL"
     gene            complement(3700..4170)
                     /locus_tag="VGQ24_12400"
     CDS             complement(3700..4170)
                     /locus_tag="VGQ24_12400"
                     /inference="COORDINATES: protein motif:HMM:NF013629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HEV8455691.1"
                     /translation="MARLDKAEGAALLERFRRHLREHHQPVTRQRDLVAQVVFRSEDH
                     LSVDGIRRELKQQGERVGTATVYRTLDLLVESGLVRAHEFGEGFKRYEPMAAQADHEH
                     LICERCGRVVEFANERMERMLPILADEHGFQHRRHRVEIYGVCRECRQRELGPL"
     gene            complement(4157..4555)
                     /locus_tag="VGQ24_12405"
     CDS             complement(4157..4555)
                     /locus_tag="VGQ24_12405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455692.1"
                     /translation="MTMPRDRQATASGSGWERLAQAVSEVLPPAEVDGVWIFAPVRRE
                     EREWGTAVLSRVDGDRRRIYTAGYVLVVKGKQRGKFESTIQELGSGPMDALARVLQEA
                     QRRIDDEHPPSSVAPEAWFSSVVAPADGTS"
     gene            complement(4552..5649)
                     /locus_tag="VGQ24_12410"
     CDS             complement(4552..5649)
                     /locus_tag="VGQ24_12410"
                     /inference="COORDINATES: protein motif:HMM:NF044507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455693.1"
                     /translation="MHPPTTPETSPDFGQPPFAGAPDARFAPLPADGVLPEGFFSTSN
                     LPTYIRVDGKWLAPIRPRMDCVVVKRPGLLETIEPRRLKRGDLIAMGEAEDGTEGIVV
                     YAQGFLGGVHGANEFRFMSTEVSRERPVNYEELAARVGEEKRRGGYLVWVVGPALVHS
                     RARADFEWFIRNGYVQAVLAGNAVAVHDIEAAIFGTTLGMSNTGQPTTGGHGLHMRAI
                     NRVRAAGSIENAVESGLIKSGIMHTLVTNRIPYVLAGSIRDDGPLPGVYSDNLQAQDV
                     MREHTVKATGAIFVATALHAIAVGNMLPAFHLCDGVALPLMTICVDQTEFVVNKLRDR
                     GTHQAYGVVTNAQDFMHVLRFYTEQWEQLHP"
     gene            5769..7898
                     /locus_tag="VGQ24_12415"
     CDS             5769..7898
                     /locus_tag="VGQ24_12415"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEV8455694.1"
                     /translation="MTLIVGLFGVAPGISVHAQEPEKSDTVALDTSRVRELPELKVTV
                     TRTEESLQRVPYAVGVLNRTEIQRGQATVGLDEALNNLPGVVVSNRYNFSLDQRISIR
                     GFGSRSNFGVRGLKILLDGVPQTLPDGQSQLTNVDFADIDRAEVLRGASSSLYGNASG
                     GVISFRTERAAPGPFAQRVRLHGGDGKRADDGFYKWQSWTSARSGNVSGTLSISQFKA
                     DGFRQHSAAEFRQLNGGLDYAISGSTIGTLRLSLADSPRAENPGALTLTEYTLNPDSA
                     AGNNIRRGADKDAQQYQLALGLRHFDDSGNEYDATIFGLIRDLANPLAAAPFTGAPLT
                     AGTYVAIDRAVGGARAGISRRLGPGEQSPRLTAGVDLQRMRDDRQNFVSDAGRRTDVT
                     LLDQREQVTEFGPFTQVQWSPDEQLLLSAGTRYDWVRFDLNDRFLTDGDDSGARTMAA
                     LSGNVGVSWSFGQQLVPYLNVSTSFETPTTTELVNKPDGSGGLNAALGPQRAINYEIG
                     ARGQPLPSISYSVALFLGRISDAIVQGPEVGGRAFFRNAGKTHNDGAEVGISVAPVRG
                     LTLNGAYTYARYRFASYRLADGTVLDGNRLPGVPEHFWRLGLRTSLPADFYLDADHTI
                     SSSILADDANTTWVDAWGAGITNLRLGWGGQTGQVEIAPFLGVNNLWDRRYVGSVTLN
                     GVGGRVFEPAPRRIIYLGTEIGYVAAP"
     gene            complement(7989..10403)
                     /gene="priA"
                     /locus_tag="VGQ24_12420"
     CDS             complement(7989..10403)
                     /gene="priA"
                     /locus_tag="VGQ24_12420"
                     /inference="COORDINATES: protein motif:HMM:TIGR00595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005658 - alpha DNA polymerase:primase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEV8455695.1"
                     /translation="MTERFALVALPLPLAHPYTYRIPETLGDRVVPGARVVVPVRRRE
                     LIGLVVSLDVDPPAAPARDVLAVPDLDPALSPALLATAEWMAGYYGAPLGLALRSILP
                     GGMWGESQVIVSLHNGTRITGGLAGEVLSWLEQKGGEAPVQSAARALKRPLWDVLERL
                     TRVNAVSLRVQPPDTDAARLTERVLSLAGERPTLLERETLFKRRPKQRELYQTLESLG
                     GSASVRHLSEQLGFGDGVLRALVRQGLARVDQSEVLRDPFAGSPVTLPPANPTPAQAA
                     AIAAAAALEPGQGALLFGVTGSGKTLVYLEAVRRALASGQGSIVLVPEIGLTPQTVSR
                     FRGAFGDEIAVLHSGLSDGERADAWRLLRRGERRVAVGARSAVFAPVARLGLIVIDEE
                     HDASYKNGETPRYHTRDVALVRARLEGARLLLGSATPSLETLVRTEARLGLLRLPERV
                     GARPLPPVEIIDLRVAPKVSDTGPVAWSEALDAAILGTLARREQALLLLNRRGYAAFL
                     QCPDCGEVWQCPRCSISLTVHQSPAALRCHYCGHEEPLPFSCRACANPVQQMRGVGTQ
                     QLERMLAERYPEARVSRMDLDTTSTKWSHQRILGAVEKGDVDLLIGTQMIAKGLDFPN
                     VTLVGVVDADTGLYLPDFRSAERTFQLLAQVAGRAGRGPKGGRVLVQTRHPTHHALVC
                     AAQHDTEGFLRQERELRESPPYPPLTSLVNLLLSGPHEGEVSGRAAALADWCTALVER
                     HELPISVLGPAPCPLVRIKDRWRWHVLLKGPSEALGRVVRYAARRLKRERSTRLVIDR
                     DPVSLL"
     gene            complement(10400..>10752)
                     /locus_tag="VGQ24_12425"
     CDS             complement(10400..>10752)
                     /locus_tag="VGQ24_12425"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEV8455696.1"
                     /translation="QSDIPVIADESCKTVADIPPLVGKVDGINIKLAKCGGLREALRM
                     IAVARAHGLMVMVGCMIESSLGITAAAHFTPLVDIVDLDGAALLANDPFIGAHIDGGQ
                     VTLPSAPGLGVRRR"
BASE COUNT         1819 a         3570 c         3555 g         1808 t
ORIGIN      
        1 ggcgacggct ttctgcccga gtcgctggac agcctgcgcg ctcgagggca cgggctcgct
       61 gctcggggcc actgggggga tgtcgaggcg atcatcagga cccccaccgg ctggcagggg
      121 gtgagcgatc cccgaggggg aggaggggga gcagggtatt aaaaacaaag gcgtgagcgg
      181 ggcagaaaga gcgtgagcgg tgagcgggtg ctttggtcga tgatttcccg cttaccgctt
      241 acgctcttgt ttccccgctc acgcctttgc gccttctcca gctctacgac ttgaacggtt
      301 gctccagcac cagaacgaca gtggttccct gcggcaggac gacgtcgcga tccttggttt
      361 caacggcgcg ttgggcgcct accgcgcctc ctaatacccc gccgatgatc gcgcccttgg
      421 tgctgcctcc caacactcga cccacgactg ccccgaccgc cgctccggca gccggcttcg
      481 cgatgtcgcc cgcgccggtc ttccgtcctt ccaaatgggt tccgacactg tcgatcctgg
      541 cagagatcgg ataggacgtg ccgttgacca ttaccgagct cggctgaagc gtcagggttc
      601 ccgtcttgtc cctcttgttc tccgattcct ttatcgcggt gaccttgaga atcacctcgg
      661 aaccggcagg aatgaccacg cggccggcgt tatccttgat gtcgcttgcg accgtggccg
      721 tcaccgtatc acccaccttg ttctttgccg agctgacctc agccgtggtc gaggcgctga
      781 gggtggtgcc ggccgacagg cttcggctcg cggcgggagc cggcggcgca gcggcggatg
      841 ggctcgggga gggtctgctg ggggacgcgg cgggacggct cggccgagtg gcggtcttcc
      901 cggccggggc cggggcgctg gccgttgggc ggtcgttcag cggaacagtg gtgtccaccg
      961 gggccagttg cagatcacga ctcaggctgt ccgccgcggc agtgtcgctc ctgtccccgc
     1021 gtccacaggc tgcaacggcc gccaacgtga gcgctgctat catcgttctc gacatctaac
     1081 cctccttgga tgtgacttgc tcgggttccg cgactcagtg acattccagc tctcgtatga
     1141 atgagctgcg gtccctgctt ccctacttca ggccctatcg gctcgccttc gtggcgggtc
     1201 tggcgctcgt cgtcatctcg aattacttcg cgatcaaggg ccctcggttc ctccaacacg
     1261 gcatcgatgc tctcaagacc ggcggcagat tcgcggaagt ccaaaccgcg gtcgtgctcc
     1321 tcctggccgt ggccctcgct agcggtgtcg cacgctacgg catgcgcgag ctgctcaaca
     1381 gcggtagtcg ccgcgttgag accgacttac ggaaccagct ctacgaccac ctgcagcgga
     1441 tgtcggccga attctacgac cggtacccga cgggcgatgt gatggcccgc acaaccaacg
     1501 acctgctcgc ggtccgcatg gtggccggtc ccgcgctcat gtacctggtg gatactacca
     1561 tcaggacgct gctgattgca cccgtcatgc tggcgatcag cccccggctg acgctgctcg
     1621 cgctgcttcc cctgctggga cttccggcgg cgatggtgct gctcggccgc gtgatccacc
     1681 agcggacgca ggcgatccag gcccagttca gcgaacttac cagccatgcg cacgaaaatc
     1741 tttcaggcgt gcgggtggtg cgatcctatc gccaggagag cgcggagacc gcgcacttcc
     1801 gcgcgctgaa cgacacctac aaggagcgca atctcggtct ggctcgggtg cagggttcct
     1861 tcttccccct gctgtcgctg ctcggcggac tgagcgggct cacggtgctc tatgccggtg
     1921 gcgcgctggt catgtccggc gcagtgaccg taggggaatt tgtggccttc ggcgtgtacc
     1981 tcgccatgct ggtgtggccg atgatcgcgc tcgggtgggc ggtgaacctg gtgcagcgcg
     2041 gggccgcctc gatggggcgg atcaacgagc tgttccggga gacgccagcc atcaccggcg
     2101 cggcgtctcc agtggcgctg ccgccggtgg ccggcgcgag ggcgctggag ttccggaatg
     2161 tctggttcag ctatccgggg ccacatgcga gggggtgggt gctccaggac atcagcttca
     2221 gggcggagcc gggatcctca ctcgccatcg ttggcgcgac cggctcgggc aagtccaccc
     2281 tggtggacct gatcgtccgc acctacgacc ccgatcgtgg cgcggtgctc atcgacggcg
     2341 tggatgtgcg agcgctgtcc ctggaggagc tcaggcgcgc ggtcggcttc gtgccccagg
     2401 aaacgtttct cttcggagag accctgcggc gaaacattct gctcggcgcc ccggacgacg
     2461 ggcggctgga acgggtctcc gacattgcac aactcaccga agctctgcct gccctacccg
     2521 agggctacga caccttactc ggcgaacgtg gcatcaacct ctcgggcggt cagaagcagc
     2581 gaaccgcgat cgcgcgcgcc ctggcgcagg acccgcccct tttcgtgctg gatgacgcgt
     2641 tgagcgccgt ggacacgaac acggaggccc gcattctcgc cggcctccgc gatgcgcttg
     2701 ccggccgcac cagcatcatc gtgtcgcacc ggctggtcgc ggtgcgcgac gcggacctga
     2761 ttctggtgct ggatggcggg cgcatcgtgg agcggggtac tcatgcagag ctgcttgccg
     2821 cgggaggccg ctattgggag ctgctgcgcc ggcagcagat ggaggaagag ctcgagacag
     2881 aaaacgtcgg gctggagaaa agcgtgaaca gtgaacagtg aacagggcgg cggttgggct
     2941 ctgtttactg ttcactgttt actgtttacg ctttttacag ttgctctctt aaaaaatcag
     3001 gtgtcaaacc ctggagccac cccgccagcc gggtgaattc gccggtgagg aggaggatcc
     3061 cgacgaagac cagcatcacc ccgctgaccc gcatgaccca cggcaaaaac cgccggaatc
     3121 gctgaaacca atcgaggaaa gagtcgaccg ccacggcggc gacgaggaac gggagcgcga
     3181 gtcccgcgga gtagaccgcc aacagcagca tgccccgcga gacatcggta gaggtggccg
     3241 cgagtccgag gatgccgccg aggaccggac caatgcaggg cgtccagccg gcagcgaacg
     3301 ccatcccgac tagcacactg ccgagatacc ccaccggttt tcgctcgagg tggagtcggc
     3361 gctcctggct cagcagcctc gggttgaaaa ctccgagaca gaacagcccg aacagaatga
     3421 tcagggctcc gccgacccgc tggagccaga cctggtaata gttcagcgcg cgtcccagcg
     3481 cggtggcgct ggcgccaagc agaatgaaca ccagggaaaa cccgcccacg aacagcagcg
     3541 cgtgcgtgag tgccactcgg cgccgcccac ttacttcggg cagggtcatc ccggtcagga
     3601 acccgacata ggaggggacc agggggagga cgcagggaga gagaaagctc agcaggcccg
     3661 cggcgaaggc caccacaaag cccagtgcgg cgggctcact catagggggc ccagctcccg
     3721 ctggcggcac tcccggcaga caccgtagat ctccacccgg tgccggcggt gctggaatcc
     3781 gtgctcgtcg gcgagaatcg gcaacatccg ctccatgcgt tcgttggcaa attcgaccac
     3841 gcgtccgcac cgttcacaga tcaggtgctc gtggtctgcc tgcgcagcca tcggctcgta
     3901 gcgtttgaaa ccctcaccaa actcgtgcgc ccgcacgagg ccgctttcca ccagcaggtc
     3961 gagcgtgcga tacaccgtcg ccgtacccac ccgttctccc tgctgcttca gctcgcgccg
     4021 gattccatcc accgacaggt ggtcttcgga tcggaacacg acctgggcca ccagatcgcg
     4081 ctggcgagtg accggttgat ggtgctcgcg gaggtgtcgg cgaaaacgct cgagcagggc
     4141 tgctccctct gccttatcaa gacgtgccat cggcgggggc cacgacggac gagaaccacg
     4201 cttccggcgc aaccgacgag ggaggatgtt cgtcgtcgat ccttcgctgc gcctcctgga
     4261 gcaccctggc gagcgcgtcc atcgggccgc tccccagctc ctggatggtc gactcgaatt
     4321 ttccgcgctg ctttcctttg accacaagca cgtaccccgc agtgtagata cggcggcggt
     4381 cgccgtctac ccgggagaga acggcggttc cccactcacg ctcttcccgg cgcaccggag
     4441 cgaagatcca cactccatct acctcggctg gagggagaac ttccgagacc gcctgcgcca
     4501 ggcgctccca cccgctgccg cttgccgtcg cctggcggtc tctcggcatc gtcatgggtg
     4561 gagctgctcc cactgctcag tgtaaaaccg cagcacgtgc atgaagtcct gcgcgttggt
     4621 gacgaccccg taggcctggt gggtaccccg gtccctgagc ttgttgacga caaactcggt
     4681 ctggtcgacg cagatggtca tgagcggcaa cgccaccccg tcacagagat ggaacgcggg
     4741 gagcatgttg cccacggcaa tggcgtgaag tgccgtggcc acgaagatcg ccccggtggc
     4801 tttgacggta tgctcgcgca tgacgtcctg ggcctgaagg ttgtcgctgt agactccggg
     4861 cagcgggccg tcgtcccgga tcgagccggc cagcacgtat ggtatccggt tggtgaccag
     4921 cgtgtgcatg atcccgctct tgatcagccc ggattccacc gcgttctcga tggagccggc
     4981 agcgcggacc cgattgatcg cgcgcatatg gaggccgtgc cccccagtcg tcggctgacc
     5041 ggtgttgctc atgcccagcg tggtgccgaa gatggcggct tcgatgtcgt gcaccgccac
     5101 cgcattcccg gccagcaccg cctggacgta gccgttccgg atgaaccact cgaagtctgc
     5161 ccgggcgcgg gagtgcacca gggccggtcc tacgacccat accagatacc caccgcgtcg
     5221 cttctcttcg cctacgcgcg ccgccagctc ctcgtaattg accggccgtt cccggctcac
     5281 ctcggtggac atgaagcgaa actcgttcgc gccatgcaca ccgcccagga atccctgggc
     5341 gtacaccaca atcccctcgg tgccgtcctc cgcctcgccc atggcgatga ggtccccacg
     5401 cttgaggcgg cggggctcga tagtctcgag cagaccgggt cgcttgacca ccacgcaatc
     5461 catccgaggg cgaatcggcg cgagccactt gccatcgacc cggatgtagg tgggcagatt
     5521 ggaggtcgag aagaagccct ccggcagcac tccgtcggcc gggagcggcg caaaccgggc
     5581 gtccggcgcg cccgcgaacg ggggctggcc gaaatccggt gatgtctcgg gagtggtcgg
     5641 tgggtgcata cggtggagga agctaggggc ccgctggggg gtattcaagc cgtggccccg
     5701 gagggtagag cggttaactt accgcctcaa cgaggagccc ctcaatgcat tgccgattga
     5761 ctctgcgatt gactctgata gttgggctgt ttggcgtggc gcccggaatt tcagtccacg
     5821 cgcaagagcc ggagaaatcc gacaccgtcg cgctcgacac cagccgggtg cgcgaactcc
     5881 ccgagctcaa ggttacagtg acccgaacgg aggagtcgct gcagcgggtc ccttacgctg
     5941 tcggtgttct gaaccgcacc gagatccaac gggggcaggc caccgtcggt ctggatgaag
     6001 cgctgaacaa cctgcccggt gtggtggtgt ccaaccggta caatttctcc ctcgaccagc
     6061 ggatctccat ccgtgggttc ggcagccgat cgaacttcgg tgtgcggggg ttgaagatac
     6121 tcctcgacgg cgtgccccag acgctgcccg acggccagag ccaactcacc aacgtggact
     6181 ttgccgacat cgaccgggcc gaagtgctgc gtggcgccag ctcgtccctg tatggcaacg
     6241 catccggcgg ggtcatctcc tttcggaccg agcgcgccgc accgggcccg ttcgcccagc
     6301 gggtgaggct gcatggaggt gatggcaagc gggcagatga cgggttctac aagtggcaga
     6361 gctggacctc cgcccggtcc ggcaacgtca gtggtaccct ttcaatttcg caattcaagg
     6421 ccgacggctt ccgccagcac agtgcagcgg agttccggca gctgaatggt ggcctggact
     6481 atgcgatttc gggctccaca atcgggacgc tgcggctcag cctggccgac agtccacggg
     6541 cggagaaccc gggtgccctg accttgaccg aatacacact caaccccgat tcggccgccg
     6601 gcaacaacat tcgccgggga gccgataagg atgcccagca gtaccagctt gccctcggtc
     6661 tccggcattt cgatgattcc ggcaacgagt atgacgccac gatcttcggg ctcattcgcg
     6721 acctggccaa cccgctcgcc gcggcaccgt tcaccggtgc cccactgacg gccggcactt
     6781 acgtcgccat cgaccgagcc gtcggcggcg cgcgggcagg catcagccga cgcctcggcc
     6841 cgggcgagca atcacccagg ctgactgccg gagtcgacct tcagcgcatg cgcgatgacc
     6901 ggcagaactt cgtgtccgac gccggccgcc gtaccgatgt caccctcctg gatcaacgtg
     6961 agcaagtgac ggagttcgga ccatttaccc aggtgcaatg gagtcccgac gagcagttac
     7021 tgctgagtgc gggtaccagg tacgactggg tccggttcga tctgaacgac cggttcctca
     7081 ccgatggcga cgacagcggc gcgcgcacca tggcagctct cagcggcaac gtgggcgtga
     7141 gctggtcctt cggccagcag ctggttccgt acctcaacgt ctctacctcg ttcgagaccc
     7201 cgactacgac cgagctggtg aacaaaccgg atggctcggg aggactgaac gccgcgctcg
     7261 ggccgcagcg ggcgatcaat tacgagatcg gcgctcgggg ccagccgctg ccgagtatca
     7321 gctactcggt ggcgctgttt cttgggcgta tcagtgacgc catcgtgcag ggacccgagg
     7381 tcggcgggcg agcattcttc cgcaatgccg gaaagaccca caacgatggt gcggaggtag
     7441 gcatctcggt ggcccctgtc cggggactca ccctcaacgg tgcgtacacc tacgctcgct
     7501 accggtttgc ctcctatcgg ctcgccgatg gcaccgtgct ggacggcaat cgccttcccg
     7561 gcgtgcccga gcacttctgg cggctggggc tccgtacctc attgcctgcc gatttctacc
     7621 tcgacgcaga tcacacgatc agctcttcga ttctggccga tgacgcgaat accacctggg
     7681 tggatgcctg gggtgccggc atcaccaacc tcaggctggg ctggggagga cagacaggcc
     7741 aggtcgagat cgcgccgttc ctcggagtga acaatctctg ggatcgccgc tatgtggggt
     7801 cggtgacgct gaacggtgtc ggtgggcggg tattcgagcc agctccgcgg cggatcatct
     7861 atctggggac cgagatcggg tacgtcgctg cgccttagga caggggaggt gaggagcaga
     7921 cgggggctgg gggaatggcc ggcgttggcc ccgcccagcc agttgaatgg gccgagcctc
     7981 tcccggcttc aaagcaacga tacaggatca cggtcgatca ccagacgcgt gctccgctcc
     8041 cgcttgagcc gcctggccgc gtagcgcacg acccggccga gcgcttccga aggccccttc
     8101 aacagcacat gccagcgcca gcggtccttg atgcgcacca gcggacacgg cgcgggcccg
     8161 agaactgaga tcggcagctc gtgccgttcg accagggcgg tgcaccagtc ggccaaggcc
     8221 gcggctcgcc cgctgacctc accctcgtgg ggccccgaga gcagcagatt caccagcgag
     8281 gtcaggggag gatagggagg cgattctcga agctcacgct cctgccgcag gaaaccttcg
     8341 gtgtcgtgct gcgccgcgca gaccagcgcg tggtgggttg gatggcgggt ctggaccagg
     8401 acccgtccgc ccttggggcc acggccggca cggccggcca cctgcgccag tagctggaag
     8461 gtccgctccg ccgagcgaaa gtcggggagg tacaggccgg tatcggcatc cacgactccg
     8521 accagggtga cgttgggaaa gtccaatcct ttcgctatca tctgcgtgcc gatcaacaga
     8581 tccacgtccc ccttctccac cgctcccaga atcctctggt gcgaccattt cgtgctcgtg
     8641 gtgtccagat ccatccggga tacccgagcc tcggggtacc gctctgcaag catccgctca
     8701 agctgttgag taccgactcc tcgcatctgc tgtaccgggt tggcacaggc gcggcagctg
     8761 aacggcaggg gttcttcatg gccgcaatag tggcaccgca gcgctgctgg cgactggtga
     8821 accgtgagcg agatgctgca gcgggggcac tgccacacct cgccgcaatc cgggcactga
     8881 agaaacgccg catagcctcg gcgattgagc aggagtagag cctgctcccg acgggccagg
     8941 gtaccgagga tcgctgcgtc cagcgcctca gaccaggcca cggggccggt gtctgacacc
     9001 ttgggcgcga ctcggagatc gatgatctcg accggcggca gcggccgcgc cccgacccgc
     9061 tcgggtaaac ggagcagtcc tagcctggcc tcggtccgga ccagggtctc gagtgaaggt
     9121 gtggcactcc cgaggaggag acgggctcct tccaggcggg cccgcacgag ggcgacatcc
     9181 cgggtgtggt agcgtggggt ctccccgttc ttgtagctcg cgtcgtgctc ctcatcgatg
     9241 acgatgaggc ccagccgggc caccggcgcg aagacggccg agcgagcacc gaccgccact
     9301 cgccgttctc cccggcgcag taggcgccag gcgtcggccc gctctccgtc ggagagcccg
     9361 ctgtgcagga ccgcgatctc atcgccgaag gcgccgcgaa atcggctcac cgtctggggc
     9421 gtgaggccga tctcgggcac gagcacgatg gagccctggc ccgaagccag cgcacggcgg
     9481 acggcttcca gatagaccag tgtcttgccg ctcccggtga cgccgaagag cagcgcgccc
     9541 tgccccggct ccagcgcggc agctgcggcg atcgcggcgg cctgagcggg ggtgggattg
     9601 gccggcggca aggtgaccgg cgagccggcg aaggggtccc gcaagacctc cgattgatct
     9661 accctggcga gaccctgccg cacgagcgcg cggaggaccc catctccgaa gccgagttgc
     9721 tcggacagat gccggaccga ggcactgccg cccaacgatt cgagcgtctg gtagagctct
     9781 cgctgtttgg gccggcgctt gaagagcgtc tcccgctcga gcagggtggg cctctcaccc
     9841 gccagcgaga gcacccgttc ggtgagtcgt gcggcgtcgg tatcgggtgg ctgcacccgg
     9901 agcgacacgg cattaacccg ggtgaggcgc tcgagtacgt cccagagcgg ccgcttgagg
     9961 gcgcgtgcgg ccgactgcac cggagcctcc ccgcccttct gctcgagcca ggacaggacc
    10021 tcgcccgcga gcccgccggt gatgcgggtg ccgttgtgca gggacacgat aacctgcgac
    10081 tcgccccaca tcccgccggg cagaatcgat ctgagcgcca gacctagcgg cgccccatag
    10141 tagccggcca tccactccgc cgtggccagg agcgccggtg acaatgccgg gtcgagatcc
    10201 gggactgcca gtacgtcccg ggccggggcg gcaggggggt ccacgtcgag agagaccacg
    10261 agcccgatca gctcgcgccg gcgtaccgga accaccacgc gcgcccccgg gacgactcgg
    10321 tcgcccaggg tctcgggaat gcggtacgtg tatgggtggg cgagcgggag cgggagggcg
    10381 acgagagcga agcgctccgt catcgccgcc tgacgccgag cccgggggcg gacggcagag
    10441 ttacctgacc gccgtcgatg tgcgcgccga tgaacggatc gttcgccagg agcgccgcac
    10501 cgtcgaggtc cacgatgtcc accaggggag taaaatgcgc ggccgcagtg atacccagcg
    10561 agctctcgat catgcagccc accatgacca tgagcccgtg tgcgcgcgcg accgcgatca
    10621 tccgcagcgc ttcgcggagg ccgccgcact tcgccagctt gatgttgatc ccatctacct
    10681 tgccgacgag cggcgggatg tcggcgacgg tcttgcagct ttcgtccgcg atcaccggta
    10741 tgtccgactg gg
//
LOCUS       DASYRV010000463         3156 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_398860, whole genome shotgun sequence.
ACCESSION   DASYRV010000463 DASYRV010000000
VERSION     DASYRV010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3156
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_398860"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..974)
                     /locus_tag="VGQ24_12430"
     CDS             complement(<1..974)
                     /locus_tag="VGQ24_12430"
                     /inference="COORDINATES: protein motif:HMM:NF017039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455697.1"
                     /translation="MSLTSRDSAAPTPPMLKHWREMKVRHPDAILFYRVGDFYEMFHE
                     DAELASRILDITLTSRGDGAPLAGVPVKAAAEYLRQLVGAGHRVAICEQVEDPKLAQG
                     LVRREVVETLTPGALMQEGWVAGSRNNWMVAVQRGSGAARRRGSTEAGQGGSGAVGLA
                     AIDLSTGEFVLETLGPNGLEEAISRLSPAEIVVSNDDTAPLPIRPEGTRPAASPLTTR
                     REPWEFDAGLAHEEVARRFGLASLDGLGLGPEDDPALGAAGALLRYLGELQPGGLPHL
                     TRPIVRRSDAFLWVDEMSRRNLELIEPLRAGARGCTLLESIDATVTPMG"
     gene            complement(995..1291)
                     /locus_tag="VGQ24_12435"
     CDS             complement(995..1291)
                     /locus_tag="VGQ24_12435"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEV8455698.1"
                     /translation="MTEQFEAVRDFQREGLNRHVGLSEVSVEQIEQARKLVPARHGAT
                     VFQIALAWLLARSPAMLVIPGTSSVEHLEENVAAAEIRLTRRDMKDLDSLHSWG"
     gene            1373..1753
                     /locus_tag="VGQ24_12440"
     CDS             1373..1753
                     /locus_tag="VGQ24_12440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455699.1"
                     /translation="MALGTLLRIAGLLALAFGIGFLFAPARVLSLYGVAAEPAVVLMA
                     RFFGSALVQLGLVLYLIRDVSDPTTRRGVVLGSFLGSLAGFVVSLTAQFWGLVNSFGW
                     SSVAIYGLLLLGYGSFVFGSPRTT"
     gene            complement(2018..3085)
                     /locus_tag="VGQ24_12445"
     CDS             complement(2018..3085)
                     /locus_tag="VGQ24_12445"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEV8455700.1"
                     /translation="MSRSNAITVFALFLMTLAVGCRGADRPKTTSESVGATTPTVSAS
                     TSTESTGTGSVATPVTYESAEGVFNDGRYSEATRLFTAYTGSNPENPWGYYMLGLSAW
                     RSGERERATEAFEHALQLDPSHRKSLFNSSRVLLEMDQPKKALERIEKALALEPMSNE
                     GLRLLGRAKYQLGDVDGAIEAYHRALSLDEHDVWAMNNLGLIYIEQGRSDEALPPLAR
                     AVELRSNSPVFRNNLGTALERTGYPVAAAKEYEAALAVDSSYAKASVSLARVTGAGQQ
                     PESEPVDLGVFSTRFQADIEAWRASAAPSDSSTAPDSTTTPDSTAVPDSSVGGLVGLS
                     DSSVASVEAVTDTLEECAGEN"
BASE COUNT          518 a         1055 c         1006 g          577 t
ORIGIN      
        1 cccatggggg tcaccgtagc gtcgatcgac tcgagcaggg tgcagccccg cgcgcctgct
       61 cggagtggct cgatcaactc gagatttcgc cggctcatct catcgaccca gaggaacgcg
      121 tcgctgcgcc gaacgatggg ccgagtgaga tggggcaggc cgccgggctg gagctcgccg
      181 agatagcgga gcaacgcgcc cgccgcacca agcgcaggat catcctccgg gcccaggccg
      241 aggccgtcca gggaggcgag gccgaatcta cgagccacct cttcatgggc gagaccggcg
      301 tcgaattccc agggctcacg acgagtcgtg agcggcgagg cagcggggcg ggtgccctcc
      361 gggcggatgg gcagcggggc ggtatcatcg ttggagacca cgatttctgc aggactcagc
      421 cgtgagattg cttcctcgag gccgttggga ccaagggtct caagaacgaa ttcgccagta
      481 ctgagatcta tcgctgccaa ccctaccgcc ccgctgcccc cctgccccgc ttcagtactg
      541 ccccgccgcc tggctgcccc gctgccccgc tgtaccgcca ccatccaatt attccggctt
      601 ccggcgaccc atccttcctg catcagggcc ccgggcgtga gggtctcgac cacttctcgc
      661 cgcaccagcc cctgggcaag cttggggtct tccacctgct cgcagatggc gacgcggtgg
      721 ccggcgccga ccagctggcg cagatactcg gccgccgcct tgaccggcac cccggcgagc
      781 ggcgcgccgt cgccccgcga ggtcagtgtg atgtcgagaa tccgggaggc aagctccgcg
      841 tcttcgtgga acatctcgta gaagtcgccg acccggtaga agaggatcgc gtcagggtgc
      901 cggaccttca tctcccgcca gtgcttgagc atcggcgggg ttggcgcagc gctgtcgcgg
      961 ctcgtgaggg acatggaggc aatatacagt cgcctcaccc ccagctgtgc aggctatcga
     1021 ggtccttcat gtctcgccgg gtgagcctga tctcggcggc cgcgacgttc tcctccaggt
     1081 gctcgaccga cgacgtaccg gggatgacga gcatcgccgg cgaccgcgcc aggagccagg
     1141 ccaaggcgat ctgaaacacc gtggccccat gtcgtgccgg caccagcttg cgggcctgct
     1201 cgatctgctc caccgacacc tccgacagtc cgacgtgacg gttgaggccc tcgcgctgaa
     1261 agtcccggac cgcctcgaac tgctcggtca ccccttcgaa atctgcggct gcaccgcgta
     1321 tactgtacca gtccccccag gaccatgccc ctgaaacgac aaggagacat ccatggcact
     1381 cggcacgctc cttcgcatcg ccggtctgct cgcgctcgcg ttcgggatcg gcttcctctt
     1441 cgctccggcg agagttctct cgctgtatgg agtggcagcg gagccggcgg tcgttctcat
     1501 ggcccgattt ttcggctccg cgctggtcca gcttggattg gtcctgtatt tgatccgtga
     1561 cgtcagcgat cccacgaccc ggcgcggcgt ggtactggga tcgttcctgg gctctctggc
     1621 cgggttcgtc gtctcactga cggcacagtt ctggggcctg gtgaacagct tcggctggtc
     1681 cagcgtggcg atctacggcc tgctcctctt ggggtatggc tccttcgtct tcgggagtcc
     1741 tcggacaacc tgaagctcac cctcttcgag gtcatcgatg ctgtgccaac gctgtggtga
     1801 acgtgaggcc gagatctttc aaacccagca ggtcggcggg aagtcttaca accgggatct
     1861 ctgtcccagg tgtgcgaaga tcgattacgg ggtgttcctg ggcgcgttac tccaatcgca
     1921 ggcgccgggc gctcggcctc taaccaccaa agaacagaag gagctgcgtc gagtattgga
     1981 cgaggcagct cctccggaag atcagggctg aagcagttca gttttcgccg gcacattcct
     2041 ccaacgtatc ggtgactgcc tcgaccgagg cgacgctcga gtcgctgagc cccacgagac
     2101 ctccaacgct cgaatcggga accgcggtcg agtcaggcgt ggtggtcgaa tccggcgcgg
     2161 tgctcgagtc actcggtgca gccgaggccc gccacgcttc gatgtctgcc tggaaccggg
     2221 tcgagaagac gcctagatcc accggctcgg actcgggctg ctgcccggca ccagtcactc
     2281 gggccaggct gactgacgcc ttcgcgtagc tgctgtctac cgccagggca gcctcgtact
     2341 ccttcgcggc cgcgaccggg tagccggtcc gctcgagtgc cgttcccaga ttattccgaa
     2401 acaccggaga attgcttctg agctcgacgg cccgggccag cggcgggagc gcctcgtcac
     2461 ttcggccctg ctcgatatag atcaggccca ggttgttcat cgcccacaca tcatgctcat
     2521 cgagagagag ggcacggtga tacgcctcga ttgctccgtc cacgtcgcca agttggtact
     2581 tggcgcgccc gagcagccgc aacccttcgt tcgacatggg ctccagcgcc agcgccttct
     2641 ctatgcgctc caaggccttt ttgggctggt ccatctccag caagacccgg ctcgagttga
     2701 acaggctctt ccgatggctc gggtcgagct gtagcgcgtg ctcgaatgcc tcggtcgcac
     2761 gctcccgctc acctgaccgc caggcggaca atccgagcat gtaatagccc caggggttct
     2821 ccgggttgct cccggtgtac gcggtgaaga gccgggttgc ctcggaatag cgaccatcgt
     2881 tgaagacacc ttcggcggac tcgtacgtca ccggggttgc cacggaaccg gtgccggtgg
     2941 actccgtcga cgtgctggcc gaaacggtag gcgtggtggc accgaccgac tcggacgtgg
     3001 tcttcggccg atccgcgcca cggcatccca cggcgagggt catgaggaac aaggcgaaga
     3061 cggtgatggc gttggagcgg gacatggatc tcctccttac gatgtggcgc gcctggcgcc
     3121 gtgagtggac cagcggacgc cactcgtaag gcaagc
//
LOCUS       DASYRV010000464        10575 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1028654, whole genome shotgun sequence.
ACCESSION   DASYRV010000464 DASYRV010000000
VERSION     DASYRV010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10575
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1028654"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..820)
                     /locus_tag="VGQ24_12450"
     CDS             complement(<1..820)
                     /locus_tag="VGQ24_12450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455701.1"
                     /translation="MTHLIHVLLWLASIGAPHPVAPRIRVVADSGEVSALDSTLARAG
                     EALARGRPWQATRLLSLTLRDSLQRPPAAVFLAATAASEWGGWSEVLLLLQAEPWIDT
                     LYDGRARVLLARASLERKADSSALEHATAALRLDPASGERLLLLASALDRLGARDSAA
                     AVYLRSAERLPQVADWIKLRAAAVIGDSAGRAQLYAGIADALPRTRIPWADAAAHERT
                     GDRAGAARRYAALGDRLTSLRLRLAFSPDSTPRTVIRRELLALATERAGSGAARD"
     gene            970..1386
                     /locus_tag="VGQ24_12455"
     CDS             970..1386
                     /locus_tag="VGQ24_12455"
                     /inference="COORDINATES: protein motif:HMM:NF013633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HEV8455702.1"
                     /translation="MTTFCSMDGTPEGRTRIDKWLWAARFYKTRALAAEAIAGGKVQV
                     NGERVKRAKPLQVGDELRIRQGPYEHQVVVRDLSDRRGPAVQAAALYEEKAESRAARD
                     ALALRLKSLHSAFVPERGRPTKKDRREINRLKGRER"
     gene            complement(1455..2711)
                     /gene="icd"
                     /locus_tag="VGQ24_12460"
     CDS             complement(1455..2711)
                     /gene="icd"
                     /locus_tag="VGQ24_12460"
                     /inference="COORDINATES: protein motif:HMM:TIGR00183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEV8455703.1"
                     /translation="MSAMPMPVDHLSEPPARGEAITLVEGRLQVPASPIIPFIEGDGT
                     GPDIWRASRHVFDHAVERAYGGRRRIAWLEVLAGEKAKDRMNSWLPDETLAAIDRYLV
                     AIKGPLTTPVGGGFRSLNVALRQKLDLYACIRPVRYFPGVPSPVKAPQDVNMVIFREN
                     TEDIYAGIEYKAGTEDARRVIDFLRGQMGVQTIRFPDTSAIGIKPISEEGSKRLIRAA
                     IDYALAQKSKSVTLVHKGNIMKFTEGGFRDWGYAVAREEYAATDLDGGPWARLPGGLV
                     LKDVIADAFLQQILTRPKEYDVIATMNLNGDYISDALAAQVGGIGIAPGANINYLTGH
                     AIFEATHGTAPKYAGQDKVNPGSVILSGEMMFRYLGWTEVADLIVSSLEKTIGQKRVT
                     YDFERLMAGATLLKTSEFAQAMVENM"
     gene            2781..4517
                     /gene="aceK"
                     /locus_tag="VGQ24_12465"
     CDS             2781..4517
                     /gene="aceK"
                     /locus_tag="VGQ24_12465"
                     /EC_number="2.7.11.5"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF002804.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008772 - [isocitrate dehydrogenase
                     (NADP+)] kinase activity [Evidence IEA];
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional isocitrate dehydrogenase
                     kinase/phosphatase"
                     /protein_id="HEV8455704.1"
                     /translation="MNSNTTLRPIAAAVASINAAYRKYELGFEEITRRARRRFERRDW
                     SAAQADATERLALYKAHVDAAVADMHDILEDAVMERTVWAAMKSHHALHTAGQPDVEL
                     AETFFNSVTRRVFSTVGVDPAIEYLDRTLAIQPDEQDAGIYRSHMVDAVGADLVCRLL
                     LELPWSVPYAQLDRDAVLVAELIDARIRGVLGTPGPVTLDLLRAVFYRNKGAYLVGRI
                     RAGTASIPLVLPLLHAERGIVVDAVLMTSDEASVVFGFSWTYFRVDSPRPRALVEFLR
                     SIMPLKPVNELYISIGYNKHGKTELYRSLMRHLEEPEARFAFAEGDEGMVMAVFTLPS
                     FNVVFKVIKDTFGAPKNATRRLVMDKYHFVFVRDRVGRLADAQEFEHLEFPVRCFPDE
                     LLTYLLAVAGATVRVEGTRVIVRHLYTERRVTPLNLYLREADDDAAREAVLDYGNAIK
                     DLAAADIFTGDMLLKNFGVTRNGRVICYDYDELCLLSECRFRRVPPPVVPEDEFAAEP
                     WFHVGEQDVFPEEFRSFLVPPGRLREAFLAAHSDLLDLDFWQRVQRRLAAGEIVDVFP
                     YRREARLQRNVL"
     gene            complement(4514..4873)
                     /locus_tag="VGQ24_12470"
     CDS             complement(4514..4873)
                     /locus_tag="VGQ24_12470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455705.1"
                     /translation="MTDRDDVTSADINQALNPHRDEEQERAREHTADVLARRGVLLFG
                     DESDDELAELWSAVDRFESVVELRGGDTMTNSPDSSEPDNPAFVLPERHAREAAGDYT
                     WRILAAAVKLTELERGN"
     gene            complement(5050..5265)
                     /locus_tag="VGQ24_12475"
     CDS             complement(5050..5265)
                     /locus_tag="VGQ24_12475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004094893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEV8455706.1"
                     /translation="MARTTGTVKWFNDAKGFGFITPSNGQKDCFVHHSAIQGSGFKSL
                     AEGEKVEFDIVQGQKGPAAENVTKIKD"
     gene            complement(5525..5824)
                     /locus_tag="VGQ24_12480"
     CDS             complement(5525..5824)
                     /locus_tag="VGQ24_12480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455707.1"
                     /translation="MSRAFVNEDAGSGEAAPRFPLPSRADPSFDAAAARALLQGAHLG
                     DTASAEVATGYYWGEPKLQSWVERILAEARQDGNERLEQLAERFLRVVTKTRRSD"
     gene            complement(5916..6653)
                     /locus_tag="VGQ24_12485"
     CDS             complement(5916..6653)
                     /locus_tag="VGQ24_12485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455708.1"
                     /translation="MAGKRLVLLALALLAGCGKDQAAPANGANRDMQRPAVDASSPLN
                     DRGAKNSPSKPAAKPVAKPAARSMPRTLVAGTAISAKFDAGISSRTHKSGQKLTGTVA
                     SDVKDKNGRTVIPAGAKVHVTITAIHESENKGDKTGKLVLTPTKLVIAGRSYPISGSA
                     KALDRTLKDRKTNAGDVAKVGAGVGAGALLGAAVSGGSTKGAVIGGAVGGAVGTQRAI
                     ETQDRDVVVPAGSRLKVTLGSPFRRSI"
     gene            complement(6820..8025)
                     /locus_tag="VGQ24_12490"
     CDS             complement(6820..8025)
                     /locus_tag="VGQ24_12490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEV8455709.1"
                     /translation="MPLFEYTARNAANGQIQKGQVDVKSKEEVSAHLRKNRLILVSVR
                     EAPRSINISLGKGRVKTRDIVIFTRQFATMINAGLPLVQSLTILASQTENKTLAETTK
                     AVVHDVEAGNTLADAFSKHPKAFTDLYVNMVAAGEAGGILDTILLRLATFLEKSDALI
                     RKVKGAMVYPAVIFSVAIIAIAVLLIFVIPTFESMFASVNMELPLPTRVVIAMSQLLI
                     HYWWVGVLGTGLGIFALKKYYATEPGQLQIDSLMLRAPILGDILRKSAVSRFTRTLGT
                     LISSGVSILDGLEITAKTAGNRVIHNAVMDSRQSIAGGETIAAPLEKSKVFPPMVISM
                     IAVGEQTGGMDEMLTKIADFYDEEVDVAVSSLLSLMEPVMIVVLGVIVGGMVVAMYLP
                     IFDMMNAVQ"
     gene            complement(8058..9200)
                     /locus_tag="VGQ24_12495"
     CDS             complement(8058..9200)
                     /locus_tag="VGQ24_12495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HEV8455710.1"
                     /translation="MTFNLRGLLEEMIQKNASDLHITAAEKPKLRVDGDIVDSSIPEV
                     LTPKDTLQLAYSVLTENQKKRFETDDELDFSFGIQNLARFRGNVFKQRGCVAMVIRMI
                     PFNVRTFQELGLPPVIAKLAERPRGLILVTGPTGSGKSTTLAAIIDKINKERKGHIIT
                     VEDPIEFIHRHQSCIVNQREIGTDTKTFASALKYALREDPDVILVGEMRDLETVGAAL
                     TIAETGHLVLATLHTNSAAESINRVIDVFPSTQQSQVRAQLAFVLEGVVTQTLLPKLK
                     GRGRSMAAEIMVATPAIRALIRDDKVHQIYSAMQSGKKFGMQTMNDALFQLYTAREVA
                     QEECERVSHDPKEFLRMIGITPMEDQEMGSTDRPQQQQQQRTGNRR"
     gene            complement(9197..>10575)
                     /locus_tag="VGQ24_12500"
     CDS             complement(9197..>10575)
                     /locus_tag="VGQ24_12500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HEV8455711.1"
                     /translation="DLGLLEDLKFITRFDLFPVIAGEYTLRNLIEKHYESSDQQLQSI
                     LKDMEETGEDVEVVEAEEDETVTQAQIDDAPVVKLINGLLTDAVRRGASDIHIEPFEH
                     EIRVRYRIDGSLLEIMRPPLKMKAALTSRVKILSQLNIAERRVPQDGRLKLKMGSRVI
                     DFRVSTLPVLFGEKIVLRILDKGNLTLDLTKFGFEVKAEKDLMKAILNPYGMVLVTGP
                     TGSGKTTTLYSALSRINTPEVNIMTAEDPVEYNLMGINQVLVRTEIGLSFAAALKAFL
                     RQDPNIIMIGEIRDLETGGIAIKAALTGHLVLSTLHTNDAPSTITRMIDMGIEAFNVA
                     SAVNLVVAQRLVRRICKDCKGEHKYKDEELAALGTDLVKLKELTFMKGSGCDTCSGTG
                     YKGRAGLYEVMALSPELRRMILRGASVADIRDQAVTEGMLTLRMDGMKKIERGVTTLE
                     EVVKETAE"
BASE COUNT         1831 a         3338 c         3373 g         2033 t
ORIGIN      
        1 catcccgagc ggcgccgctg ccggcgcgtt cggtggcgag ggcaagcagc tcgcgccgga
       61 ttaccgtgcg gggagtgctg tcggggctga acgccagacg gagtctgagg ctggtgagac
      121 ggtcccccag tgccgcatag cgtcgcgcgg cgccggcccg gtcgcccgtc cgttcatgcg
      181 ccgcggcatc cgcccatggt atgcgggtgc gcggcagggc atccgcgatg ccggcataga
      241 gctgagcgcg tccagcactg tcgccgatga cggcagccgc acgcagcttg atccaatccg
      301 ctacctgagg caaacgctcg gccgatctga ggtacacggc ggctgcgctg tcgcgcgcgc
      361 cgaggcggtc gagcgcgctg gctagaagga ggaggcgttc tcccgacgcg ggatccagcc
      421 ggagggctgc ggttgcgtgt tccagggccg aggaatcggc ctttcgctcg agcgaggcgc
      481 gcgccagcaa gacgcgcgca cgaccatcgt agagcgtgtc gatccacggt tccgcctgaa
      541 gcagcaggag tacctcgctc cagccacccc actcactcgc agctgtagcc gcgaggaaca
      601 cggcggccgg cggccgctgc aagctgtcgc gcaaggtcaa tgagagcagc cgggtggcct
      661 gccacgggcg acctcgggcc aacgcttcgc ccgcgcgcgc caacgtcgag tccagcgcag
      721 acacctcacc ggagtccgcg accacgcgga tgcgcggcgc gaccgggtgg ggcgcaccga
      781 ttgacgcgag ccacaggagc acgtggatca aatgggtcaa gccgacaccg tccagagagg
      841 ggtgagcgat cggtgtgcga cgatgcaaat gccgcgccgt ggctaactta ggctagggag
      901 caccgtactg gacccaggcc ctctgattct gcaccggacc tcgcaaaacg ggggcgaggg
      961 gagcggggtt tgactacttt ttgcagtatg gatgggacac cggaaggcag aacgcggatc
     1021 gacaagtggc tttgggctgc gcgattctac aagactcgcg cgctcgccgc ggaggccatc
     1081 gccggcggta aagttcaggt caacggcgag cgggtaaagc gagccaagcc gctgcaagtg
     1141 ggggacgagc tgcggatccg ccagggacct tacgagcacc aggttgtggt gcgagacctc
     1201 tcggaccgcc ggggtccggc ggtccaggca gcggcgctct acgaggagaa agcggagagc
     1261 cgggcggcga gggacgcgct cgcactgcgg ctcaagagcc tacactcggc atttgtgccg
     1321 gagcggggca ggccgacgaa gaaggaccgg cgggagatca atagactaaa ggggcgtgaa
     1381 cggtaaacag taaacagtga acgggacgac tcggcgaacc cctgtttact gttcaccgtt
     1441 tactgttcac gctgttacat attctctacc atcgcctgag cgaactcgct ggtcttgagc
     1501 agcgtcgcac cggccatcag gcgctcgaaa tcgtaggtga cccgcttctg cccgatggtc
     1561 ttctccagtg aggagacgat caggtccgcc acttcggtcc agccgaggta gcgaaacatc
     1621 atctcgcccg acagaatcac ggagccggga ttcaccttgt cctgaccggc gtacttcggg
     1681 gcggtaccgt gggtggcctc gaagatggcg tgtccggtga ggtaattgat attggctccg
     1741 ggagctatgc cgatacctcc cacctgggcg gcgagcgcgt cggagatgta gtcgccgttc
     1801 aggttcatcg tcgcgatcac gtcgtactct ttggggcggg tgagaatctg ttggaggaag
     1861 gcgtcggcga tcacatcctt gaggacgagc cccccgggta accgcgccca gggtcccccg
     1921 tcgaggtcgg tggcagcata ctcctcccgg gccacggcgt agccccagtc gcggaagccg
     1981 ccttcggtga acttcatgat gttgcccttg tgtaccagcg tcacgctctt ggacttctgg
     2041 gccagggcgt agtcgatggc cgcccggatg aggcgcttcg agccttcttc cgagatgggc
     2101 ttgattccaa tggcgctggt atcggggaac cggatggtct gtacgcccat ctgaccccga
     2161 agaaaatcga tcacgcgccg tgcgtcttcg gtcccggcct tatactcaat gccggcgtag
     2221 atgtcctcgg tgttctcgcg gaagatgacc atgttgacgt cctggggcgc cttcaccggc
     2281 gagggcaccc cggggaaata gcgcaccgga cggatacagg cgtagaggtc gagcttctgc
     2341 cgcagcgcca cattcaggga acggaatccg ccgccgaccg gggtggtgag cggtcctttt
     2401 atagccacca gatagcgatc gatggcggcg agagtttcgt cggggagcca gctgttcatc
     2461 cgatccttgg ccttttcgcc cgcgagcacc tcgagccatg cgatcctgcg ccggccgccg
     2521 taggctcgct ccaccgcgtg gtcgaacacg tgtcgggagg cgcgccagat gtcaggaccg
     2581 gttccatcgc cttcgataaa cggaatgatg ggcgatgcgg gtacctggag cctgccctcg
     2641 accaaggtga tcgcttcacc ccgggcgggg ggctcggaca ggtgatccac gggcatgggc
     2701 atggctgaca tgatgcacgt ccttctcgct acggggcgaa ctttcgtggg actttgccgc
     2761 tgaatctgat cgagcgaccg atgaacagca atacgaccct ccgcccgatt gcggccgccg
     2821 tcgcctcgat caatgcggcc tatcgaaaat acgagctcgg attcgaggag atcactcgtc
     2881 gggcccggag acgcttcgag cggcgggact ggtccgcagc tcaggccgac gcgacggaac
     2941 ggctggcgct ctacaaggcg cacgtcgatg ccgcggtcgc cgacatgcac gacattctgg
     3001 aagatgctgt gatggagcgg acggtctggg ccgccatgaa gtcgcaccac gccctgcaca
     3061 cggcgggtca acccgacgtg gagctggccg agacgttttt caactcggtg acccggcggg
     3121 tattcagcac ggttggggtg gatccggcca tcgagtacct ggatcggact cttgcgatcc
     3181 agccggacga gcaggatgcc ggcatctacc ggagccacat ggtagacgcg gtgggcgcag
     3241 atctcgtatg ccggctgctg ctggaactgc catggtcggt gccttacgcc cagctggacc
     3301 gcgacgccgt cctggtggcc gaactgatcg atgcgcggat tcgcggagta ctcggaacgc
     3361 cgggcccggt cacgctcgat ctccttcggg cggtcttcta ccggaacaag ggggcgtacc
     3421 tggtcggccg gatccgggca ggcacggcca gcatcccgct cgtgctgccc ttgcttcacg
     3481 cggaacgggg catcgtggtg gacgccgtgc tgatgacgtc ggacgaggcg agcgtggttt
     3541 tcggcttcag ctggacctac ttccgggtgg actcgccccg accccgcgcc ctggtcgagt
     3601 ttctcaggtc gatcatgccg ctcaagccgg tgaacgagct gtatatctcc atcggataca
     3661 acaagcacgg caagaccgag ctgtaccgca gcctcatgcg ccacctggag gagcccgagg
     3721 cgcgctttgc ctttgccgaa ggcgacgaag ggatggtgat ggccgtcttt accctgccct
     3781 cgttcaatgt ggtgttcaag gtgatcaagg acaccttcgg cgcacccaag aatgccaccc
     3841 gacgcttggt catggacaag taccactttg tcttcgtgcg agaccgggtg gggcgactgg
     3901 ccgacgccca ggagttcgag cacctggagt ttcccgtccg ctgtttcccc gacgagctgc
     3961 tgacctacct gctcgccgtg gccggcgcca ccgtccgggt cgaaggcact cgggtcattg
     4021 tccggcatct ctacaccgaa cgccgggtca ccccgctgaa cctgtacctg cgggaggcgg
     4081 atgacgacgc ggcccgggag gccgtcctcg actacggaaa tgccatcaag gatctcgccg
     4141 ccgcggatat cttcacggga gacatgctac tcaagaactt cggagtgact cgcaacgggc
     4201 gggtgatctg ctacgactat gacgagctgt gtctcctctc ggagtgccgc ttccggcgag
     4261 ttcctccgcc ggttgttccg gaggacgagt tcgcggccga gccctggttc catgtcggcg
     4321 agcaggacgt gttcccggaa gagttccggt cctttctggt tcctccaggc cggcttcgcg
     4381 aggcctttct cgcggcgcac agcgacctgc tcgacctcga cttctggcag cgcgtgcagc
     4441 ggcggcttgc agccggcgag atcgtggacg tttttcccta ccggagggag gcgcgcctgc
     4501 agcggaacgt tctttagttc cctcgttcca gctcggtgag cttcaccgcg gccgcgagaa
     4561 tccgccaagt gtagtctccg gctgcttcgc gcgcgtggcg ctccggcaac acgaaggcgg
     4621 gattgtccgg ctcggacgag tcaggcgagt tcgtcatcgt gtcgcccccg cgcagctcga
     4681 ctaccgattc gaaccgatct accgccgacc acagctcggc cagctcatca tcgctctcgt
     4741 cgccgaacag aagtacgccg cgtcgagcga gcacatcggc ggtatgctcg cgagcccgct
     4801 cctgttcctc gtcccggtga gggttcaggg cctggttgat atcggccgac gtcacatcgt
     4861 cgcgatccgt catgtctcct ccgccattcg gatgcccgca cgccccggcg atctacggcc
     4921 ctttgtgccg gtcccttcag attaatatcc gcggccggcc cgtccagccc gaggagccac
     4981 tcgcctcaca aaacaggggg ccgcccggtt cccggacggc ccccaatacg agctctgctg
     5041 attcggcgat cagtctttga tcttggtgac gttctccgcc gccggaccct tctggccctg
     5101 tacgatgtcg aactccacct tttcgccttc agccagcgac ttgaagccgc tgccctggat
     5161 ggcggagtgg tgcacgaagc agtccttctg cccgttggac ggggtgatga agccaaagcc
     5221 cttcgcgtcg ttgaaccatt tcacggttcc ggtggtacgt gccatgtccc tactccctca
     5281 gtttgttggt cgtcggagtc cggtgatgcc gtacctgccg acagtgttag gttcgcggtc
     5341 gatgcccccg cgccgggtcc cggtgatgac cggccatagc catagccgag ttttccgggt
     5401 aagctgcaaa gcaaaaggac ctagctgtga gccaggtcca tggggatgtc actggttccg
     5461 cgacgctacg cccactacgg tcatgctctg ccgtgggtca atgtaggggt ataccactac
     5521 cctgtcaatc tgaccggcgc gtttttgtga ctacccgcaa gaacctttca gccagctgct
     5581 ccagccgctc gttgccatcc tgacgcgcct cggccaggat gcgctccacc caggactgta
     5641 acttcggctc tccccagtag tatccggttg caacctccgc gctggcagtg tcaccgaggt
     5701 gagcgccctg gagcagggct cgggccgccg cggcatcaaa cgacggatcg gcccgcgatg
     5761 gtagcgggaa tcgaggcgcc gcctcacccg acccagcatc ctcgttcacg aaggccctgg
     5821 acatgctcca gcatagcagc acagatgaag ccgaccaggg tacaacccag acccccggcc
     5881 aacgacctga ccgggcgtct accgttccat cggtctcaga tgctgcgccg gaacggggaa
     5941 ccgagggtca ccttgagacg cgacccggcc ggaaccacaa cgtcgcgatc ctgggtctca
     6001 atggcacgct gggtcccgac ggccccacca accgcgccgc cgatcaccgc gcccttcgtg
     6061 ctcccgccgc tcactgccgc ccccaagagg gcgcctgcac cgacgcctgc gcctactttc
     6121 gccacatcac ccgcattggt cttccgatcc ttcagggtcc gatcgagcgc cttggccgag
     6181 ccggagatcg ggtagctacg gcccgcaatc accaacttgg tgggggtcag gaccagcttc
     6241 ccggtcttgt cgcccttgtt ctcggactcg tgaatcgccg tgatggtcac gtgcaccttg
     6301 gcacccgccg ggatcaccgt gcggccattc ttgtccttga cgtcggatgc cacggtgccg
     6361 gtgagcttct gccccgactt gtgggtccgg gagctgatgc ccgcatcgaa cttggccgag
     6421 atggcggtgc cggccacgag ggtgcggggc atcgacctgg cggccggctt ggcaaccggc
     6481 ttagcggcgg gcttggaggg cgagttcttg gccccccggt cgttgagcgg ggagctggca
     6541 tccaccgcag gacgttgcat atcgcggttg gcgccgttgg ccggcgcggc ctggtcctta
     6601 ccgcaccccg ccaacaaggc tagcgccagt agtaccaatc gtttacctgc catggaaccc
     6661 tccgaaactg ttggaaactg gatagtcgat ctggatgcag atgcctgggg ggagggcaat
     6721 tccagggcca tcgtcgatgt ccttggatac acgccacgag cttgctgcca atgctattgg
     6781 aggcgccccg caagctcatg gatatgcgtc tgtaccggct tactgcaccg cgttcatcat
     6841 atcgaagatc ggcaggtaca tggcgaccac catgccgccg acgatcacgc cgagcactac
     6901 gatcatcacc ggctccatca gcgagagcag tgaggagacc gccacgtcga cttcctcatc
     6961 gtagaagtcg gcgatcttgg tgagcatctc atccatgcca ccggtctgct cgccgaccgc
     7021 gatcatcgag atgaccatcg gcgggaacac cttcgacttc tccagtgggg cggcaatcgt
     7081 ctcgccgccc gcgatggact gccgggaatc catcaccgca ttgtggatca cgcggttgcc
     7141 ggccgtcttg gcggtgatct cgagcccatc caggatcgag acgccggagg agatcagggt
     7201 gccgagcgtg cgggtgaacc gcgagacggc ggacttcctg aggatgtcgc cgagaatcgg
     7261 agcacgaagc atcaggctgt cgatctggag ctggccgggc tcggtcgcat agtacttctt
     7321 gagtgcgaag atcccgagcc cggttccgag cacgcctacc caccagtagt ggatcagaag
     7381 ctgggacatc gcgatcacga cccgcgtggg caacggaagc tccatgttga ccgaggcgaa
     7441 catgctctcg aacgtcggga tgacgaagat gagcagcacg gcgatcgcga taatggccac
     7501 gctgaagatg acggccggat agaccatggc gcctttgacc ttgcggatca gggcgtcgct
     7561 cttttccagg aaggtggcca gccggagcag aatggtgtcg agaataccgc ccgcctcacc
     7621 ggccgccacc atgttgacat acagatcggt aaatgccttg ggatgcttgg agaacgcgtc
     7681 ggccagggta ttgcccgctt cgacgtcgtg caccaccgcc ttggtcgttt cggccagcgt
     7741 cttgttctcc gtttgcgagg ccagaatcgt gagcgactgg accaggggca ggccggcgtt
     7801 gatcatggtg gcaaactgcc gggtgaagat cacgatgtcc cgcgtcttca cccgcccttt
     7861 gcccaggctg atgttgatgc tccgaggcgc ctcccgcacg ctcaccagga tcagccggtt
     7921 cttgcgcagg tgggcgctta cctcttcctt gctcttgacg tccacctggc ccttctggat
     7981 ctgtccgttc gcggcgttgc gcgcggtgta ttcgaacagt ggcatcagtc ctctcccgga
     8041 tcgagactac gaaaccttta gcggcgatta cccgtgcgct gctgctgctg ttgctgggga
     8101 cggtcggtac tgcccatctc ctgatcctcc atcggcgtaa tgccgatcat ccgcaggaat
     8161 tccttcggat cgtgcgacac acgctcgcac tcctcctgcg ccacctcgcg agcggtatac
     8221 agctggaata gcgcgtcgtt catggtctgc atgccgaact tcttgcccga ctgcatggcg
     8281 gaatagatct ggtggacctt gtcgtcccgg atgagcgcac ggatggccgg ggtggccacc
     8341 atgatctcgg cggccatgga gcggccccgc cctttgagct tgggcaacag cgtctgggtg
     8401 acgacgcctt cgagcacgaa cgcgagctgc gcccgcacct gggactgctg cgtggacgga
     8461 aagacgtcga tgacccggtt gatcgattct gccgcagaat tggtatgcaa cgtggccagg
     8521 acgaggtgac ccgtctccgc gatggtgagg gcggcgccca ccgtctcgag gtcgcgcatt
     8581 tctcccacca gaatgacgtc ggggtcttcc cgcaaggcat acttgagggc ggaggcgaat
     8641 gtcttggtgt cggtgccgat ctcgcgctga ttgacgatac aggactggtg ccggtggatg
     8701 aattcgatcg ggtcttccac cgtgatgatg tggccctttc tctccttgtt gatcttatcg
     8761 atgatcgcgg ccaatgtggt cgattttccg gagccggttg gaccggtcac caggataaga
     8821 ccacgcggcc gttcggccag cttggcaatg acaggaggaa ggcctaactc ctgaaatgtt
     8881 cgcacattga agggaatcat gcggattacc atggccacac atccgcgctg cttgaagacg
     8941 ttgccgcgga agcgcgccag gttctggatg ccaaaggaga agtcgagctc gtcatcggtc
     9001 tcgaaccgct tcttctggtt ctcggtgagg accgaatacg cgagctgaag ggtgtccttc
     9061 ggggtcagga cctcaggtat cgagctgtcg acgatgtcac cgtccacccg cagcttgggc
     9121 ttctcggctg cggtgatgtg caggtccgag gcgttcttct ggatcatttc ctctaagagg
     9181 ccccgcaggt tgaacgtcat tcagcagtct ccttgaccac ttcctcgagg gtggtgacac
     9241 cgcgctcgat cttcttcatc ccgtccatgc gcaacgtgag catgccttcg gtgaccgcct
     9301 ggtcccggat atccgcgacc gacgcccccc gcaggatcat gcggcgcagc tccggggaaa
     9361 gggccatgac ctcgtagagg ccggcgcgtc ccttgtaccc cgttccgctg cacgtatcgc
     9421 agccggatcc cttcatgaat gtcagctcct tgagctttac aagatctgtg cccaaggcgg
     9481 ctaattcttc gtccttgtac ttgtgctcgc ccttgcaatc cttgcagata cgacggacca
     9541 atcgctgtgc cacgacgagg tttacggcac tggcgacgtt gaacgcctcg atgcccatgt
     9601 cgatcatacg cgtgatcgtg ctgggcgcat cgttggtgtg cagagtcgag agcacgaggt
     9661 gcccggtgag cgccgccttg atagcgatgc cgccggtttc gagatcccgg atctcgccga
     9721 tcatgatgat gttggggtcc tgccgcagga atgccttcag cgcggccgca aagctgaggc
     9781 cgatctcggt gcggaccagc acctggttaa tgcccatcag gttgtactcg accgggtctt
     9841 ccgccgtcat gatgttgact tcgggtgtgt tgatccggga gagcgcggag tagagcgttg
     9901 tggtcttgcc ggacccggtc ggtccggtga cgagcaccat gccgtacgga ttgaggatcg
     9961 ccttcatcag atccttctcc gccttcactt cgaacccgaa cttggtcagg tcgagcgtca
    10021 ggttcccctt atcaaggatt cggagcacga tcttctcgcc gaacagcacc ggcagcgtcg
    10081 agacccggaa gtcgatgacc cggcttccca tcttgagctt gagccggccg tcctggggaa
    10141 cccgccgctc cgcgatgttg agctgagaaa gaatcttgac gcgggacgtg agcgccgcct
    10201 tcatcttgag tggcggccgc atgatctcga gcagcgagcc gtcaatccgg tagcgcaccc
    10261 ggatctcgtg ctcgaagggc tcgatgtgga tgtcgctggc cccccggcgg acggcatcgg
    10321 tgaggaggcc attgatgagc ttgaccacgg gcgcatcgtc gatctgcgcc tgagtgaccg
    10381 tctcgtcttc ctctgcctcc accacctcga cgtcttcgcc cgtctcctcc atgtccttga
    10441 ggatgctctg aagctgctgg tcagaggact cgtagtgctt ctcgatcagg ttgcggaggg
    10501 tgtactcccc cgcgatgacg gggaacagat cgaagcgggt aatgaacttc agatcttcca
    10561 gcagtccgag atccg
//
LOCUS       DASYRV010000465         6247 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_190608, whole genome shotgun sequence.
ACCESSION   DASYRV010000465 DASYRV010000000
VERSION     DASYRV010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6247
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190608"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..185
                     /locus_tag="VGQ24_12505"
     CDS             <1..185
                     /locus_tag="VGQ24_12505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455712.1"
                     /translation="FSPSANNTVVVTYIDAAGWKAESTNPAVVSTASDVCGVYVGVAA
                     NTPNAAVKAEGAPACY"
     gene            308..697
                     /locus_tag="VGQ24_12510"
     CDS             308..697
                     /locus_tag="VGQ24_12510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEV8455713.1"
                     /translation="MRSREGFTLIELLIVVVIIGILAAIAIPKFANTKEKAVVASMKS
                     DLRNLAQAEESYWVENRTYYGGVLPGPTIQFNTSPGVSVVVVSATDGGWSARATALPL
                     TTTQCVIFYGTTPPIPPATADAAVACS"
     gene            698..1879
                     /locus_tag="VGQ24_12515"
     CDS             698..1879
                     /locus_tag="VGQ24_12515"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEV8455714.1"
                     /translation="MPHGRRRNPLRTALLLELGFVTSAAVVMVGLTTILITGSDLREA
                     LGSLLALWLGSTLVFLLFGGYAVHRLVVGPLQRLTAEADALAVGEFPAHQPQETAELE
                     LLAARYRVMAENLLDVQSQVVRVEKLAGIGRLAAGVAHEVRNPLGALGSYIEVLQRRG
                     ADPAVIGDMHQAVERIERIVQGLVDYARPRMGATATISSPGTTDLNAAVRTVLDFLDP
                     QGILRDHSLELSLDPDLPLVRGDRHQLEQVIVNLVVNACQASPGGRVAIGTLRKVLGT
                     GRRSLARREDGEGQLPDPGRAWVPEPRPRDLPRGTRGVMLFVADDGPGISEHDRERIF
                     DPFFTTKDPGQGTGLGLAIVARTVHESGGTVWADRAREGGAVFKVFLPTAGETDAAAD
                     R"
     gene            1860..3203
                     /locus_tag="VGQ24_12520"
     CDS             1860..3203
                     /locus_tag="VGQ24_12520"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEV8455715.1"
                     /translation="MRLLIVEDDAGFRQSLGLLLGESGHVVEAEGDPERALTRVNEEE
                     FDLILCDVKMPGMDGLSFLRRYRAQGGNALIIMMSAYGDEDAALAAMREGAYDYLQKP
                     FKPDEVILTVRKAEERERLRREVDELRMSLGIGAVGDLVVSQSRGMRDVLELAGRVAR
                     HTTTVLITGESGTGKEVIARAIHRMSPRSERSFTAINCAAIPEHLLESELFGHTKGSF
                     TGATSDHPGLFEIAHGGTLLLDEIADLPQALQAKLLRVLEEGEIRRLGARDSRKIDVR
                     VLAATGRPMEQAVERGEFRSDLYYRLNVVRLHIPPLRERPDDIPELLAHFARQVAQRL
                     GHPVSVTPAALVALTQYSWPGNVRELRNAVERAAVLSAGGLLDRRDFALSDGSPNPAG
                     ATQGALDLRTQVEAVERAAIQRALDASNGNRRKAANLLGISLRTLFYKLRRLPAA"
     gene            3382..3840
                     /locus_tag="VGQ24_12525"
     CDS             3382..3840
                     /locus_tag="VGQ24_12525"
                     /inference="COORDINATES: protein motif:HMM:NF023444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
                     /protein_id="HEV8455716.1"
                     /translation="MATRTNGFTIIETMMVVTILGAVVLIGYPRMRDGMTSANVRGAR
                     TTLINLLSKARTAATQSNRVTLLKIQGNNAFVLARPRLVAAAGSNADTLGAVEPLGDI
                     YGVTVTAAIDSVRFDPRGLGTGFGTGTDFLVSKNGKTETIRVDGLGRVTK"
     gene            3837..4208
                     /locus_tag="VGQ24_12530"
     CDS             3837..4208
                     /locus_tag="VGQ24_12530"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HEV8455717.1"
                     /translation="MKRSSSGFTLVEVLVAIVVLGIGIVALVGSSAMVTRMIGRGKVE
                     TRAAQVASRRLETLRLAAYSTSPRCTAAGFANGGPVTTSNVTESWVVPAAGKVRTVQV
                     NVSYRTVQGARTASLQTRIEC"
     gene            4211..5068
                     /locus_tag="VGQ24_12535"
     CDS             4211..5068
                     /locus_tag="VGQ24_12535"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEV8455718.1"
                     /translation="MANRRGFTLAEIMIAMTLMLIVSGAAFKLLVTTQRLSRSQTERA
                     GLQSNVRMGSLVVLNDLRELGTVTGGAGDKNDILTAEVSDITYRAMRGMGFICQAPTA
                     TQVRITRNAFSGFRDPQAGRDGLYVFIDGDPDSETDDAWLPVAITDVSTTTACPGTMG
                     DGITLTTPNTAGLVGIPVGTPVRFYEVMELKLHQADGKSWLGARSISAGEAIQPVLGP
                     LVDGNGFQLEYLDAGGAITADRTAIKSIRITIRGISDGAVNAGVEGSLTHVQDSLVTQ
                     VTLRNAFRP"
     gene            5095..6240
                     /locus_tag="VGQ24_12540"
     CDS             5095..6240
                     /locus_tag="VGQ24_12540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455719.1"
                     /translation="MRAPRLTDERGMALAVALFALVVIGLLVAGTFFSGRLEQQSGQN
                     TFYSGQAAEAAEAGISDAIGTATPTSLLALTVGGTAADLGTVSLGSRVDVARQLSRVT
                     SSVFLIRTVGSRRDAAGTALATRSAGSLLRLVTPHLLVRGGLSAIGQITVTGNATVSG
                     TDTTPPGWKVAPAVECPPEADKAGVVYNGSLTQTGSSVITGSPPTQADPTLNAGNLLG
                     GTNFDALKALRTLTIGSHISGLAPATTGAPPVCNTGVENNWGEPVDRASPCFNYFPII
                     HHYGDLSISGAGLGQGILLVEGNLSVQGQISFFGPVIATGSVDVRGTGSDDVKFYGGI
                     IASDVQLDDNRLSGNATVLYSSCANRRALQGSGVVTRLSERGWVQLY"
BASE COUNT         1075 a         2028 c         2079 g         1065 t
ORIGIN      
        1 cctttagccc gagcgcgaac aacaccgtcg tcgttaccta catcgacgcg gcgggctgga
       61 aggccgagtc gacgaacccc gcggtggtct ctaccgcgag cgacgtctgc ggtgtgtatg
      121 tgggtgtggc ggccaatacg ccgaacgcgg ccgtcaaggc tgagggcgcg ccggcttgct
      181 actaagcctg gaatgatggt gggtgagaag ggcggtgcca taatgtcgcc gcccttttct
      241 ctaccaggct gactcgcttg agggtgccat catgactacc cggaggacgg cggcttggag
      301 cagatcgatg cgaagcaggg aggggtttac cctgatcgag ctgctgatcg tggtcgtgat
      361 catcggcatc ctggccgcga tcgcgattcc gaagttcgcc aacaccaagg aaaaggcggt
      421 cgtggcttcg atgaagtccg acctccgcaa tctggcacag gctgaggaat cgtattgggt
      481 cgagaatcgg acctattatg gcggagtcct ccccgggccg accattcagt tcaacaccag
      541 tcccggagtg tccgtcgtcg tggtctcggc cacggacggc ggctggtctg cgagagccac
      601 cgcgcttccg ctgaccacga cgcagtgcgt gatcttttac ggcacgactc cgccgatacc
      661 tccggccact gccgatgccg cggtagcgtg cagctgagtg ccgcacggcc gccggcggaa
      721 cccgctccgg accgcgttgc tgctcgagtt gggatttgtt acctctgccg cagtcgtgat
      781 ggtagggctg acgacgattc tgatcaccgg gagcgacctt cgcgaggcac tcgggtcgct
      841 cctggcgctg tggctgggca gcacgctggt cttcctgctc ttcggaggct acgcagttca
      901 ccgcctggtg gtcggcccgc tgcagcgact gactgccgag gctgacgcgc tcgcggtggg
      961 cgaatttccg gctcaccagc ctcaagagac cgctgaactc gagctgctcg ccgcgcgata
     1021 tcgcgtcatg gcggaaaact tgctggatgt gcagagccaa gtggtccggg tcgagaagct
     1081 cgccgggatc ggccggcttg ccgccggggt cgcccatgag gtgcggaatc ccctcggtgc
     1141 cctcggaagc tacatcgagg tgctccagcg gcgcggggcc gatccggccg tgatcggaga
     1201 catgcaccag gccgtcgagc ggatcgaacg gatcgtgcaa gggctcgtgg attatgcccg
     1261 gccgcgaatg ggagcgactg caacaatcag cagtcctggc accacggatt tgaacgcggc
     1321 ggtgcggacg gtactcgatt tcctggatcc ccaagggatc ctccgggatc actcgctgga
     1381 gctttcgctg gatccggatc ttccgctggt gcggggggac cgacaccagc tggagcaggt
     1441 catcgtgaac ctggtggtca atgcctgcca ggcaagccct ggtggacgtg ttgcgatagg
     1501 aactttacgc aaggtgcttg gaaccggacg tcgcagcctc gcgcggcggg aagatggtga
     1561 gggtcaactg ccagatcccg gccgggcctg ggtgccagag cctcggccac gtgacctccc
     1621 tcgggggact cgcggggtga tgctgttcgt ggctgacgac gggcctggga tttccgagca
     1681 cgatcgcgag cggatcttcg acccgttctt caccaccaag gacccggggc agggcaccgg
     1741 gctgggactg gcgatcgtcg ctcgaacggt gcacgaaagc ggaggcaccg tgtgggccga
     1801 tcgggcgaga gaaggcggtg ctgtgttcaa ggttttccta ccaaccgcgg gtgagaccga
     1861 tgcggctgct gatcgttgag gacgacgcgg gtttccggca atcgctcggg ctcctgctgg
     1921 gcgagtccgg ccacgtggtc gaagccgagg gtgacccgga gcgggcacta acccgggtca
     1981 acgaggagga gttcgatctc atcctctgcg acgtcaagat gcccggcatg gacgggctca
     2041 gctttctccg gcgataccgc gcccagggtg gcaatgccct catcatcatg atgagcgcct
     2101 acggggacga agatgccgcc ctggccgcta tgcgggaggg tgcgtacgac tacttgcaga
     2161 agccgttcaa gcccgatgag gtgatcctca cggtccggaa ggccgaggag cgggagcgtc
     2221 tccgtcgaga agtcgacgag ctgcggatga gcctggggat cggcgccgtc ggcgatctgg
     2281 tggtctccca gagccgggga atgcgcgacg tcctcgagct ggcgggccgg gtagcgcgtc
     2341 acaccaccac cgtgctcatc accggggaga gcggaaccgg caaggaagtc atcgcccgcg
     2401 caatccaccg aatgagtccc cgcagcgagc gcagcttcac ggccatcaac tgcgccgcga
     2461 tcccggagca cctgctcgag tcggagctct tcggccatac caagggctcc tttaccggcg
     2521 ccacgtccga tcaccccggt ctgttcgaga tcgcccacgg gggaaccctg ctgctcgatg
     2581 aaatcgccga tctcccgcag gccctccagg ccaagctgct gcgagtcctg gaggaaggcg
     2641 agatccggcg gctgggcgcg cgcgactcac gcaagatcga tgtccgcgtg ctcgccgcta
     2701 ccggacgtcc catggagcaa gcggtcgaac ggggcgagtt tcggtcggat ctctattacc
     2761 gcctcaacgt cgtgcggctg cacatcccgc cgctccgcga gcgacccgac gacatcccgg
     2821 agctgctcgc ccatttcgcc cggcaggtgg cgcagcggct gggtcatccg gtcagcgtga
     2881 cccccgccgc gctggtggca ttgacccagt acagctggcc aggaaacgtg cgtgagctgc
     2941 gcaacgcggt tgagcgcgcc gcggtgctct cggcgggcgg cctgttggac cgcagggact
     3001 tcgcactctc agacggttct cccaacccag ctggtgccac ccaaggtgcg ctcgatcttc
     3061 gcacccaggt cgaggccgtc gagcgcgcgg caatccagcg cgccctcgac gcgtcgaatg
     3121 gcaaccgccg caaggccgcc aatctgctgg ggatcagcct gcggaccctc ttctacaaac
     3181 tcaggcggct gcctgccgcc tgagcccagc cggcgcagtc cggtgcgcta acgcgcaagc
     3241 tcctgcagag tttttgccct ccttcaaatc gcgaaggcgt tgatctgtag tgacttagca
     3301 ctgtggtacg acccctgcct ctcccatcgg tcagcccctt tggatgccca cactcccccg
     3361 ccaaagcatc caggagaatt tatggctaca cggaccaacg gattcacgat catcgagacc
     3421 atgatggttg tcaccattct gggtgcggtg gtgctcatcg ggtacccccg gatgcgggac
     3481 ggcatgacca gcgccaatgt caggggagcc cgtacgacct tgatcaacct gctctccaag
     3541 gcgcgtaccg cagcgaccca gagcaaccgc gtcaccctac tcaagatcca gggaaacaac
     3601 gcctttgtcc tggcgcggcc tcggctggtg gccgcggcag gaagcaacgc ggatacgctc
     3661 ggtgcggtcg aaccgctggg cgacatctac ggggtgaccg tgaccgccgc gatcgactca
     3721 gtacgcttcg atccgcgcgg tttgggtacc ggttttggaa ccggcaccga tttcttggtt
     3781 tccaagaacg ggaagacgga gaccatcagg gtcgatggcc tggggagggt aacgaaatga
     3841 agcgctcgag ctcagggttc acgctggtcg aagtgctggt ggcgatcgtg gtgttgggga
     3901 tcggtatcgt cgccctggtc ggctcgtcgg ccatggtgac gcgcatgatc ggccgcggca
     3961 aggtggagac tcgcgcggca caggtggcct ctcgccggct cgagacgctg cgtctggcgg
     4021 cctactccac ctccccgcgc tgcaccgcgg ctggttttgc caatggcggc ccggtgacca
     4081 cgagcaacgt cacggaatcg tgggtggtgc cggctgcagg caaggtccgg actgtccagg
     4141 tcaacgtcag ctatcgcacg gtgcagggcg cgcgcaccgc aagtctccag accagaatcg
     4201 agtgctgacc atggccaacc gacgcggctt caccctggcc gagatcatga tcgccatgac
     4261 gctgatgctc atcgtcagcg gggcggcgtt caagctcctg gtcaccaccc agcggctctc
     4321 gcgcagccag acggaacggg ccggcctcca gtccaacgtg cgcatgggct cgctggtagt
     4381 cctgaacgat ctccgggagc tgggcactgt caccggaggc gccggggaca agaacgacat
     4441 cctgaccgct gaggtcagcg acatcacgta ccgcgccatg cgcgggatgg gcttcatctg
     4501 tcaggcgccg acggccactc aggtccggat cacccggaac gccttctccg gctttcggga
     4561 tccacaggcc ggtcgcgacg ggctctatgt cttcatcgac ggggatccgg acagcgagac
     4621 ggacgacgcc tggctacccg tggcaattac cgacgtatcg accactaccg cctgtcccgg
     4681 caccatgggc gacgggatca cgctgacgac gcccaacacc gcgggcctgg tgggcatccc
     4741 cgtgggaacg ccggttcgct tctacgaagt catggagctg aagctccatc aggccgacgg
     4801 gaaatcctgg ctcggcgcgc gctcgatcag tgccggcgaa gcaatccagc cggtgctcgg
     4861 ccccttggtc gacggcaacg gcttccaact ggagtatctg gatgcgggcg gcgccatcac
     4921 ggccgaccgc acggcaatca agagtatccg catcaccatt cgcgggatca gcgacggcgc
     4981 ggtcaacgcc ggcgtcgagg gcagcctgac tcatgtgcaa gacagtctgg ttacccaggt
     5041 gaccctgcgc aacgcgttcc ggccgtaatc ggaatgccgc tcaaggagac tcttatgcga
     5101 gccccacgac tgaccgacga gcgcggtatg gcgctcgccg tggccctctt cgccctggtt
     5161 gtcatcgggc tgctcgtggc cgggacgttc ttctccggcc ggctggagca gcagagcggg
     5221 cagaacacct tctattcggg ccaggcggcc gaggcggccg aggccggcat cagcgatgct
     5281 atcggcaccg ccacaccgac cagcctgctg gctctcactg tcggcggaac ggccgcggat
     5341 ctggggacgg tctccttggg gagccgggtg gatgtcgccc ggcagctctc gcgggtcacc
     5401 agcagcgtgt tcttgatccg cacggtcggc agccgcagag atgccgccgg aaccgcactc
     5461 gccacccggt cagccggttc gctgctccgg ctggtgaccc cgcacctcct ggtacggggc
     5521 ggcttgtcgg ccattggaca gatcaccgtc accggcaacg cgaccgtgag cggcaccgac
     5581 accaccccac cgggttggaa ggtggcgcca gccgtggagt gcccgccgga agccgacaag
     5641 gcgggggttg tctataacgg cagcctcacc cagaccggct cgtcggtgat taccggcagt
     5701 ccgcccaccc aggcggaccc cacgctcaac gccggcaatt tgctgggcgg gaccaatttc
     5761 gacgcgctca aagcgcttcg gaccctgacc atcgggtccc atattagcgg cctcgcgccg
     5821 gccaccaccg gcgcgcctcc ggtctgtaat acgggcgtgg agaacaattg gggcgagccc
     5881 gtagacaggg ccagcccgtg cttcaactac ttcccgatca tccaccatta cggcgatctc
     5941 agcatctcag gggcgggatt gggccaggga attctgctgg tggaaggcaa cctcagcgtg
     6001 cagggtcaga tctcgttctt cggcccggtc atcgcgaccg gatcagtcga cgtgcgcggc
     6061 accggcagtg acgacgtgaa gttctacggc ggcatcatcg cctcagacgt ccagctcgat
     6121 gacaacaggc tgagcggcaa cgccacggtg ctctattcct cctgtgccaa ccggcgggcg
     6181 ctgcagggct ccggggtggt cacccggctg tcggagcgcg gctgggtcca gctctactga
     6241 cgagcag
//
LOCUS       DASYRV010000466         4519 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2591674, whole genome shotgun sequence.
ACCESSION   DASYRV010000466 DASYRV010000000
VERSION     DASYRV010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4519
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2591674"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1970)
                     /locus_tag="VGQ24_12545"
     CDS             complement(<1..1970)
                     /locus_tag="VGQ24_12545"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEV8455720.1"
                     /translation="MKPFAFLTFAAVALAACQDASAPSAPTSEHARSSSARAQPGELI
                     PGQYIVVFRGDVRDAKSVAKALAGKHGAKLRRTYEAALKGMAIELPDTAAAALRQDPA
                     VEYVEQNQVVHAIAEPIVQPGATAGLDRVDQRFLPLSGTYSYTADGTGVRAYIIDTGI
                     NFDHSDFSGRAVLGIDASWSGTTDGVDCNGHGTHVSGTIGGTTYGVAKKVQLYVVRVL
                     DCQGSGNIFTVLDGIEWVTRNRVLPAVANMSLGGGYSPSMNQAVTNSIAAGVTYAVAA
                     GNNAADACSYSPSSTPQALTVAASDQSDVFASFSNTGYCVDMEAPGVGITSDWIGSAN
                     ATNTISGTSMASPHVAGAAALYLSANPGAGPYQVEAALTSNATGSVLSSVPAGTWNRL
                     LYTGFLNPNMWQSRAPLSQPRRELALGAINGVIYAIGGVKPTGTVAGVAAYDPGTDTW
                     SPKAPLPAARQAGDGAALIGGLLYAPGGYNATNVLTKSLYAYNPASNTWVTKASIPVT
                     SGCGVSRSISGKLYVLTGCTGTTSAPSGLLHRYDPSTNTWIARKTAPHAHRYPAAGVI
                     GGKLYVVGGYNGSSASATLDVYDPATNTWATRASMPTARRGGAAGAVIGGTLYVIGGR
                     NAAGDYIATVEAYSPATNTWVARAPLPGARSGL"
     gene            complement(2345..>4519)
                     /locus_tag="VGQ24_12550"
     CDS             complement(2345..>4519)
                     /locus_tag="VGQ24_12550"
                     /inference="COORDINATES: protein motif:HMM:NF012927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEV8455721.1"
                     /translation="TVYERNRVEDTFGFGVVFSDETLENVGEADPDTNQAMAAAAARW
                     EDIEIHYRGTVLRSTGHRFSGLERKTLLELLARRARWLGVEVHWQREIRDLSDCGLPA
                     ADLIVAADGAASLIRDRLSDRFQPQLDWRRNRFVWLGSTRPFPAFTFYFKSSPAGLWR
                     THAYQYAPGRSTFIVEAREETWKASGLDENDEQATVEYLEHLFKDELQGHPLRANRSI
                     WRRFPTVRNARWHSANVVLLGDAAHTAHFSVGSGTKLAMEDAIALAAALRVEQSIPAA
                     LASYEAGRRPQVESLQRAAQASLEWFESVERYHDTEPLQFAFNLLTRSLRITHENLKL
                     RDPTLVGQMDRWFAEQAGKQSGRPVTQDPCPPPLFTPYRIRDLVLPNRIVVSSMCQYR
                     SEDGLPNDWHLVHLGSRAIGGAGLVMTEMTDVSREGRISPGCAGMYLPAHVGGWQRIV
                     EFVHRESEAKIGIQLSHAGRKGSTCVLWEGEDEPLAEGNWPLIAPSPIPYRPHNQTPR
                     EMTRGDMDQVAADFVRATGMAHAAGFDLLELHLAHGYLLASFISPLTNRRTDEYGGSL
                     ANRMRYPLEIVIRVRAEWPQAKPLSVRISAVDWAPGGMEAHDAVEVARMVVAAGADIV
                     DVSAGQTVPEGKPVYGRQFQTPFSDRIRHEARVPTMTVGNISSPADVNTILAAGRADL
                     VVLARAHLWDPYWTRHAAADLGHTLPWPPMYATLNRYTPRLR"
BASE COUNT          718 a         1476 c         1558 g          767 t
ORIGIN      
        1 agtccagagc gcgccccggg caggggggct cttgccaccc acgtgttggt cgcggggctg
       61 taggcctcga ccgtggcgat gtagtccccc gccgcgttgc gcccgccgat cacgtagagc
      121 gtgccaccaa tgaccgctcc cgccgcgcca ccgcgccgcg ccgtaggcat gctggccctc
      181 gtggcccacg tattggtggc cgggtcgtac acgtccagcg tggccgacgc gctactgccg
      241 ttatacccac ccacgacgta gagcttgccg ccgatcaccc ccgcagcggg atagcgatgg
      301 gcgtgagggg cggtcttgcg cgcgatccat gtgttggtgc tggggtcgta tcgatgcagc
      361 agccccgaag gcgcactcgt ggtgccggtg caccccgtaa gcacatagag cttgcccgag
      421 atggagcggc tcacgccgca gccgctcgtg accgggatgc ttgccttggt gacccacgta
      481 ttgctcgccg ggttgtaggc gtagaggctc ttcgtgagga cattcgtggc gttataccca
      541 ccaggtgcgt agagcaggcc gccgatgagg gctgcaccgt cccccgcctg gcgcgcggcg
      601 ggcaagggtg ctttcgggct ccacgtgtcc gtgcctggat cgtaggccgc caccccggct
      661 acggtgccgg tgggcttgac cccgccgatc gcgtagatga ctccgttgat agctcccaat
      721 gccagctcgc gccgcggctg ggataggggc gcccgcgact gccacatatt cggattgagg
      781 aagccggtgt agaggagtcg gttccatgtg ccggcgggga cagaggacag cacgctcccc
      841 gtcgcgttac tggtgagcgc ggcctccacc tggtaaggtc cagcgcctgg attggccgag
      901 agatagagcg ccgcggcacc tgccacgtgc ggtgaggcca tggatgtccc gctgatcgtg
      961 ttggtcgcgt tggcgctccc gatccagtcg gaggttatgc ccacgccagg ggcctccatg
     1021 tcgacgcagt aaccagtgtt cgagaaggag gcgaacacat cgctctggtc gctggcggcc
     1081 acggtaagcg cctgaggtgt gctcgatggg gagtagctgc aggcgtcggc ggcattgttg
     1141 ccggccgcga cggcataggt aacacccgcg gcgattgagt tggtcaccgc ctggttcatc
     1201 gatggtgaat agccaccgcc caggctcatg ttggccaccg ctggcaacac ccgattcctc
     1261 gtgacccatt cgatcccatc gagcaccgtg aatatgttgc cgctcccctg gcagtcgagc
     1321 acgcgaacaa cgtacagttg gaccttcttc gccaccccgt aagtcgtgcc gccgatcgtc
     1381 cccgacacat gggtgccgtg cccgttgcag tcgacaccgt cagtcgtccc ggaccagctc
     1441 gcgtcgatgc ccaggacggc gcgcccgctg aagtcgctgt ggtcaaagtt gatgccagta
     1501 tcgatgatgt atgcccggac gccagtaccg tcagcggtgt agctataggt gccgctgaga
     1561 ggcaggaatc gctgatcgac ccggtccagc cccgccgtag caccgggctg aacgatgggc
     1621 tcagcgattg cgtgaaccac ctggttctgc tccacgtact cgaccgccgg gtcctggcgt
     1681 agcgcggccg ctgccgtgtc gggcagctca atcgccattc ccttcagtgc agcctcatag
     1741 gtgcgcctga gcttggcgcc gtgcttgccc gcgagcgcct tggctaccga tttggcgtcc
     1801 cgcacatccc cccggaaaac cacgatgtac tggccgggta taagctcgcc gggctgggcc
     1861 ctggcggaag agcttctggc gtgctcactg gtgggcgcgc tgggtgccga ggcgtcttgg
     1921 caggccgcta gcgcgaccgc ggcgaaggtg agaaacgcga atggcttcat gtggctctcc
     1981 ccaggattac catccccaac cacaccctga ttttagtccc agttttgcgc tcgggtgtca
     2041 agcagaagtc aagcgcgggt atgggtcagt gtcaggacga gcgcaagggg aaggcgccag
     2101 ccaccccggg aggcgagttc gtgcgggagg agattcatca gttccgcgaa gggaaacact
     2161 gggcgcggtc aagccggcag gcgatcccga tcgggctgtc gaagccgtgg cgggcccggg
     2221 gtgaaggtgc tgaagcggcg ggaggcggcg gcgaagagca agacgggcgt tgcaagccga
     2281 gcagctcgtg gatcctgagg tactcggagc tagacggcag tcggcggtat cctcagactc
     2341 ggagctaccg cagtcggggg gtgtagcgat tcagcgtcgc gtacatcggc ggccagggga
     2401 gcgtgtggcc gagatcggcc gcggcgtggc gggtccagta cgggtcccac aggtgggccc
     2461 gcgccagcac caccagatcg gcccggccgg ccgccaggat ggtgttgacg tcggccggtg
     2521 acgagatgtt ccccacggtc atcgtgggca cccgcgcctc gtgccggatc cgatcgctga
     2581 acggggtctg gaactggcgg ccgtagaccg gcttgccctc ggggacggtc tgccccgcgg
     2641 agacgtccac gatatcggcc ccggcggcga ccaccatccg ggctacctcc acggcgtcgt
     2701 gcgcctccat gccgccaggc gcccagtcga ccgccgaaat cctcacagac agcggtttgg
     2761 cctggggcca ctcggcgcgg acccggatca cgatttccag cgggtagcgc atccggttgg
     2821 ccagggatcc accgtactcg tcggttcgcc ggttggtgag cggcgaaatg aacgaggcca
     2881 ggaggtaccc gtgcgccagg tgcagctcca gcaggtcgaa cccggcggcg tgagccatcc
     2941 ccgtggcgcg gacgaagtcg gcggccacct ggtccatgtc gccccgggtc atctcccggg
     3001 gcgtctggtt gtggggtcgg taggggatgg gagacggcgc gatcagcggc cagttccctt
     3061 cggccagtgg ctcgtcctcg ccttcccaca gcacgcaagt cgagcccttc ctgccggcgt
     3121 gcgacagctg gatgccgatc ttggcctcgc tctcccggtg tacgaactcc acgatccgct
     3181 gccacccgcc cacgtgggcc gggagataca tcccggcgca gccgggggag atccggccct
     3241 cgcggctcac gtcggtcatc tcggtcatca ccaacccggc gccgccgatc gcccggctgc
     3301 cgaggtgcac caggtgccaa tcgttcggca gcccgtcttc cgaccggtat tggcacatcg
     3361 acgacaccac gatccggttg ggcaggacca gatcacggat ccggtagggc gtgaacaacg
     3421 gcggagggca gggatcctga gtcactggcc gcccgctctg tttacccgcc tgctcggcga
     3481 accagcggtc catctgtcca accaatgtgg gatcgcgcag cttcaggttt tcgtgggtga
     3541 tgcggaggct tcgggtgagg aggttgaagg cgaactggag cggctcggtg tcgtggtagc
     3601 gttccaccga ttcgaaccac tcgaggctcg cctgggccgc gcgctggagg ctctccacct
     3661 ggggccgccg gcccgcctcg tagctggcga gcgcagcggg aatcgattgt tcgactctga
     3721 gtgccgccgc cagcgcgatc gcgtcctcca tcgccagctt ggtgcccgag cccaccgaga
     3781 agtgcgccgt atgggcggca tcgcccaaca gcaccacgtt cgccgagtgc cagcgggcat
     3841 tccggacggt ggggaaacgc cgccagatgg agcggttggc ccggagcggg tgcccttgca
     3901 actcgtcctt gaacaggtgc tccaggtact cgaccgtggc ctgctcgtca ttctcgtcga
     3961 gaccgcttgc cttccaggtc tcctccctgg cctcgacgat gaaggtcgag cgacccgggg
     4021 catactgata ggcatgggtg cgccagagcc cagctggcga cgacttgaag tagaaggtga
     4081 aggcgggaaa gggacgggtg cttccgagcc agacgaagcg gttgcggcgc cagtcgagct
     4141 gaggttggaa ccgatcggac agccggtcgc ggatcaggct ggcggctccg tcggcggcga
     4201 cgatcagatc ggcggcggga aggccgcagt cggaaaggtc tcggatctcc cgctgccaat
     4261 gaacctcgac ccccagccat cgcgcccgcc tggcgagcag ctccagcagg gtcttccgtt
     4321 ccagtccgga gaagcgatgc cccgtggacc gcaggacggt gccgcggtag tggatctcga
     4381 tatcctccca gcgcgccgcg gcagccgcca tcgcctggtt ggtgtcgggg tcggcctcgc
     4441 cgacgttctc cagagtctca tcggagaaca ccacgccgaa gccgaaggtg tcctcgaccc
     4501 ggttccgctc gtagaccgt
//
LOCUS       DASYRV010000467         5980 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1138342, whole genome shotgun sequence.
ACCESSION   DASYRV010000467 DASYRV010000000
VERSION     DASYRV010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5980
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1138342"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="VGQ24_12555"
     CDS             complement(<1..280)
                     /locus_tag="VGQ24_12555"
                     /inference="COORDINATES: protein motif:HMM:NF012377.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase family glycosylhydrolase"
                     /protein_id="HEV8455722.1"
                     /translation="MRKPRWSILALLLSLLVGPHSVSAYSVTGGRVVDAQGQAVQLRG
                     VNWFGFETTDHVVHGLWARDWKSMIDQMRDLGINAVRLPVCPGTLRGSA"
     gene            complement(446..1039)
                     /locus_tag="VGQ24_12560"
     CDS             complement(446..1039)
                     /locus_tag="VGQ24_12560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455723.1"
                     /translation="MRHATRSSAIIARRFAVAGSIGVALWLGAVAPATAQLSTSPGQE
                     CDNVPLCQVQPRGSFLLAGWGTVDYDYTCLGDHPYVWNFSYSQTGSPSVSALAAIFAV
                     TPGTIGILMTNWNLFATDQVTINLACSKNNSFGGICGGPVDDPACPVVAGSEHNYCSG
                     GPVPVCFQTYQERCQPSNQLYTCTTILLVTYCQACPG"
     gene            complement(1017..1511)
                     /locus_tag="VGQ24_12565"
     CDS             complement(1017..1511)
                     /locus_tag="VGQ24_12565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455724.1"
                     /translation="MRWRAGQAGPIRAGWEHLVLAGVLTLVTVAPSAAQGYSTTLFVP
                     SKQNECVGVPDCLSDVEPAVSVPARGRAPARFACPQSHPHLWAWDVGQHEHISVKLTA
                     VDRSSATIEGTNLAEVEGHFIVHLGCSTAPYAGSAFLKSRHLAPTGWLGSRSRRPDAT
                     RDPQ"
     gene            1793..3013
                     /locus_tag="VGQ24_12570"
     CDS             1793..3013
                     /locus_tag="VGQ24_12570"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEV8455725.1"
                     /translation="MKSSSLSRRRFLLASSAMTVSAAGTARAPKAVSAQTESATKYLI
                     LACDGGGIRGLVTSLLLRQLDTDHPGFRQQAYLTAGTSTGGIISLGLACGVSPGTLVN
                     LYQTDGAKIFTESACRAGGEFRVPNNPSRALKGTLGETWWQFILDHLNDLVCPWYDNA
                     PLRSLLETILDAMASATLDSLVNPARPRYVLVNTLQLCSPANVWTPLQLTNLPNLQGN
                     ASGGTRVIDAALSTGAAPVYFPPYDHPTYGFCADGGLFANNPGAAAVTTLLESGIPLD
                     SIWMLSLSTGNTQNCYPASLINAAGASSFGSIYWMWPEPQPLTPVTGQPYTPSFPLME
                     AVFDATAQMDAYYCSRLLPGRYQRANVPLTQPVPLDDFSATAIETMLSSTKDYIQQSP
                     EWAAIRTWIGANFG"
     gene            3226..4371
                     /locus_tag="VGQ24_12575"
     CDS             3226..4371
                     /locus_tag="VGQ24_12575"
                     /inference="COORDINATES: protein motif:HMM:NF019221.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BBP7 family outer membrane beta-barrel protein"
                     /protein_id="HEV8455726.1"
                     /translation="MRNVLAAALVLALVLQGGVAAAQADRPGSERPGPFSFSAEALLW
                     WFKSSPTPVPIIANAPLNVPDSKVLLGGGDLDTNPNPGFRLTAAYALNERWGLEGNFL
                     YIPSRSTSNSVASSGQLGSTDLLLPFFDVTQNQESFTEISFSPVFAGSAREELTNSLM
                     GAEANGTWAVATGRPWQIDLLGGFRWLRLHETYTVTTTSPFIPPFPQDVWNTTDKFDA
                     FNNFYGAQLGVRGRYDWRRFFASGAVKFAMGAMVQTVDISGSLVSNDFNGFGQPQTFS
                     GGYFALPTNIGSHTRSVFAVVPEIGLNIGYQITSWAAVTVGYTFLYTNNVVRPGNQIN
                     RNINPTQSTSYTEDPAAQLQGTAQPSFKFNSSGFWAQGINVGLSFRF"
     gene            4383..>5980
                     /locus_tag="VGQ24_12580"
     CDS             4383..>5980
                     /locus_tag="VGQ24_12580"
                     /inference="COORDINATES: protein motif:HMM:NF021665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G8 domain-containing protein"
                     /protein_id="HEV8455727.1"
                     /translation="MNMTMRVLLAATVLAIVSTVTGAAFARDVIQEKCPKRTLEQAPE
                     DVGDDLLIDVDCKVPAGTYTWRNVRIINNGTLRFEDTPNGVINFTAASISIEAGGELV
                     AGTSDLPFGSSDGQLNFAFTGAPPRTCEALDSHADWCGKGIIVRKGATLNLYGAKGAT
                     ASSVSWTHLRDAAGPNVPGAKVAGTGTSTLKLARDVTLGKGAWKANDWIAVATTSFSP
                     FETEFVQLAADPTPDASTGGSQVTLKHALKHYHFGGKDPGFPSAANYNGDKSTADYNY
                     GVDERAEVGLISRSIKLTATVDAGNPHWGGEIKILTGFTHVVLQGAELENFGKAHLGA
                     YPIHLHQLGPVAAGTLTINANSVHHSYNKCLTLHSSQDVTVENMVCARIIGHIFYQEY
                     GDESGTKYLNNLGLGAMSNSFDVPDHLRGQFWAGDNLAATIGYNGFKVPNTDDQQNPV
                     RGVCACRGVKEPARVECADAPSQTGELTILGNHTPYTPPHPAACSSADVYFEPASGFW
                     IVNPTTVLEGNSIGGCQGVGRAYW"
BASE COUNT         1072 a         2037 c         1883 g          988 t
ORIGIN      
        1 gcgcggatcc gcgcagggtg ccgggacaca ccggcaaccg caccgcattg atgccgagat
       61 cacgcatctg gtcaatcatg ctcttccagt cacgggccca caggccgtgc acgacgtgat
      121 cggtcgtctc gaatccgaac cagttgacac cgcgaagctg cacggcctgc ccctgcgcgt
      181 cgacaacgcg gccaccggtc accgagtacg cggagactga atgcggtccg acgagcaacg
      241 agagcaagag agcgaggatc gaccatcgag gtttgcgcat agggctccca tgatgggatg
      301 gcctcgatcg cccagtcaag agcgatccgt cgcatctcac gcgtccatca cgcgttggac
      361 agccgggatg agtctccgag cggtgtcgtc ttgagtgggc ggctctgtgc gaggccgagg
      421 agtgcttcga gcgaggggag gcccgctacc ccgggcaggc ttggcaatag gtcaccaaga
      481 ggatggtcgt gcacgtatag agctggttgc tcggctggca tcgctcctgg tacgtctgaa
      541 agcacaccgg cactggcccc ccgctgcagt agttgtgttc gcttcccgcg acgacggggc
      601 acgccgggtc atcgaccggc cccccgcaga tgccaccgaa cgagttgttc ttcgagcagg
      661 ccaagttgat ggtcacctgg tcggtcgcaa acagattcca gttcgtcatc aagatcccaa
      721 tcgtgcccgg ggtgacggca aatatcgcgg cgagggcgct gacggagggg gatccggtct
      781 ggctgtacga gaaattccac acgtacgggt ggtccccgag gcacgtgtaa tcgtagtcga
      841 cggtgcccca gcccgccagg aggaacgatc ccctgggctg cacctgacag agcggcacgt
      901 tgtcgcactc ctgacctggg ctggtcgaga gctgggccgt cgccggcgcc acggcaccga
      961 gccacagcgc cacgccaatg ctgcccgcga cggcgaaccg gcgagcgatg atcgcgctac
     1021 tgcgggtcgc gtgtcgcatc gggtctcctc gatcgggatc ccaaccagcc agtcggggcc
     1081 aggtggcgcg atttcaagaa agcggagccg gcatacggcg cggtcgagca gccgaggtgc
     1141 acgatgaagt gcccctcgac ctccgcaagg ttggttccct cgatggtcgc gctgctgcgg
     1201 tcgaccgcgg tcagcttgac gctgatgtgc tcgtgctgtc cgacatccca cgcccacagg
     1261 tgcgggtggc tctgcggaca cgcgaaccga gccggggccc ggccccgggc cggaacggag
     1321 acggcgggct cgacgtcgga gagacagtcg gggacgccga cgcactcgtt ctgtttcgaa
     1381 ggcacgaaca gcgtcgtgct gtagccctgc gccgcgctgg gtgccacggt aaccagcgtc
     1441 agcacgccag ccagcaccag atgttcccac cccgcgcgga ttggaccggc ctgccctgct
     1501 cgccatcgca tcgcgctgtc ctccgagttc cgtatcaatc gattgaacgg caccggcgga
     1561 ccggtgtcgc ctggccgacc gtcgctttcc cgagacggat ataagatgtt gcgcgggcag
     1621 aagtcaagcc ggaacgctcg gcgcccggtc cccgagtagc acttgatgca ttgcatcggt
     1681 ccctggcgcc tgcgaagatg gcccgtgcaa tcatcgagat cggtttccga gacgttcgcg
     1741 gaaacgatgc ccaccggatg ccaatcaagc ggccctgccc gaggaggttg tgatgaagtc
     1801 tagctcgctt tcccgacggc gtttcctcct cgcctcgtcg gcgatgaccg tttccgcggc
     1861 cgggactgcg cgggcgccaa aggcggtctc ggcgcagacg gaatccgcca ccaagtacct
     1921 gatcctcgcc tgcgatgggg gcgggatccg gggcctcgtt acctcgctgc tcctgcgcca
     1981 actcgacacg gatcatccgg gtttccggca gcaggcgtac ctgaccgcgg gcacctcgac
     2041 gggcggcatc atttccctgg gtctggcgtg tggcgtgtcg ccggggacgt tggtgaatct
     2101 ctatcagacg gacggggcga agatcttcac cgagagcgcc tgtcgcgccg gtggcgagtt
     2161 tcgcgtcccc aacaaccctt cgcgcgcgct caagggcacg ctcggcgaga cctggtggca
     2221 attcattctc gatcacctga acgacctcgt gtgcccctgg tatgacaacg ctcccctacg
     2281 tagcctcctc gagaccatcc tcgatgcaat ggcctcggcg acgctcgata gcctggtgaa
     2341 cccggcgcgg ccacgctacg tgctcgtgaa cacgctccag ctctgcagcc cggccaacgt
     2401 ttggaccccc ttgcagctga ccaatctccc caacctccag ggcaacgcga gcggcggcac
     2461 ccgagtgatc gacgccgccc tcagcaccgg cgcggccccg gtgtacttcc cgccctacga
     2521 ccatcccact tacggtttct gtgccgacgg ggggctcttc gccaacaatc ccggcgccgc
     2581 cgccgtgacc acgctgctcg agtccggcat tcctctcgac agcatctgga tgctgtccct
     2641 cagcaccggg aacacgcaga actgctaccc cgcgtcgctc atcaacgctg cgggcgcctc
     2701 ctccttcggt tcgatctact ggatgtggcc ggagccgcag ccgctgacgc cggtaacggg
     2761 ccagccctat actccgagct tcccgctgat ggaggcggtc ttcgacgcga ccgcgcagat
     2821 ggacgcctac tactgctcgc gcctgctgcc gggccgatac cagcgcgcca acgtacccct
     2881 cacccagccg gtccccctcg atgacttctc ggcgaccgcc atcgagacca tgctctcctc
     2941 gaccaaggac tacatccagc agtcgcccga gtgggcggcc atccggacct ggatcggcgc
     3001 gaacttcggt tgacggcggg ccggtcaacc cgaggcgacg cggcccttgc aggggcggtc
     3061 agggccggct gcaccaccgc caatgagcac catgtcgaag aagggcgtct gcgcttttgc
     3121 tcgaccgcgg tcgctgccac aaatagcgtg acgcggggcg gccggctgat gtagagtccc
     3181 gcgcaggctc ggtgctatgc cgctgccctg tcgagaggag cgcttatgcg caacgtgcta
     3241 gcggcagcac tcgttctcgc actcgtcctt cagggagggg tggccgcagc gcaggccgac
     3301 cgtcctggtt cggagcgccc ggggcccttc agtttcagtg cggaggcgct cctctggtgg
     3361 ttcaagagta gccccacccc ggtgccgatc atcgccaacg ctccgctcaa cgtcccggac
     3421 tccaaggtcc tcctcggcgg aggggacctc gacaccaatc ccaatccggg cttccggctg
     3481 acggccgctt acgcgctgaa cgagcgctgg ggcctggaag gcaatttcct gtatattccc
     3541 tcgcgctcca cgagtaacag cgtagcttca tccggccagc tgggatcgac agatctgcta
     3601 ctccccttct tcgacgtcac ccagaaccag gagagcttca cggagatttc cttctccccg
     3661 gtcttcgcgg gcagcgcccg ggaggagctg acgaacagct tgatgggggc ggaggcgaac
     3721 gggacctggg ccgtggccac ggggcgcccg tggcagatcg acctgctggg tgggttccgg
     3781 tggctgcgcc tgcacgagac ctacaccgtc accaccacta gccctttcat tccaccgttc
     3841 ccccaggacg tctggaacac gaccgacaaa ttcgacgcgt tcaataactt ctacggcgcc
     3901 cagctcgggg tgcggggaag gtacgactgg cggcgattct tcgcaagcgg cgccgtgaaa
     3961 ttcgcgatgg gggcgatggt gcagacggtg gacatcagcg gttcactggt gagcaacgac
     4021 ttcaacggct tcgggcagcc ccagacgttt tcggggggct acttcgccct gcccacgaac
     4081 atcggcagcc acacgcgtag cgtgttcgcc gtggtgcccg agatcgggtt gaacatcggt
     4141 tatcagatca cctcctgggc cgccgtgact gtgggctata ccttcctcta cacgaacaac
     4201 gtcgtccgac ccggcaacca gatcaaccgc aacatcaatc cgacgcagag cacctcatac
     4261 accgaagacc ccgccgccca gctccagggc accgcccagc cctcgttcaa gttcaacagc
     4321 tcgggcttct gggcccaggg catcaacgtt ggcctgagct tccggttcta agcgaggacg
     4381 ccatgaatat gacgatgaga gtgctgctgg ccgcgacggt gctggccatc gtgagcacgg
     4441 tgacgggtgc cgcctttgcc cgggatgtaa ttcaagagaa gtgcccgaag cgcacgctcg
     4501 agcaggcacc cgaagatgtc ggcgacgatc tgctgatcga cgtcgactgc aaggtgcccg
     4561 cgggcaccta cacctggcgc aacgtccgga tcatcaacaa tgggaccctc cggttcgagg
     4621 acacgccgaa cggggtcatc aacttcaccg cggcgtcgat ctcgatcgag gcggggggcg
     4681 agttggtggc ggggacgtca gatctcccct tcggctcgag cgacggccag ctcaacttcg
     4741 ccttcacggg agcgcccccc cgcacgtgcg aggcgctcga ctcgcacgcg gactggtgtg
     4801 gcaagggaat catcgtgcga aagggcgcca ccctcaatct ctacggagcc aagggggcca
     4861 cggcctcctc ggtgagctgg acccacctga gggacgccgc cggccccaac gttccgggcg
     4921 ccaaggtcgc gggcacaggg acgagcacgc tcaagctggc ccgcgatgtc accctgggca
     4981 agggggcctg gaaggcgaac gactggatcg ccgtcgccac cacgagcttc agccccttcg
     5041 agacggagtt cgtccagcta gccgcggatc ctaccccgga cgcatcgacg gggggtagcc
     5101 aggtcaccct gaaacacgcc ctcaagcact accatttcgg cgggaaggat cccggcttcc
     5161 cgtcggcggc gaactacaac ggcgacaagt ccacggcgga ctacaactac ggcgtcgacg
     5221 agcgggccga ggtcggtctc atcagccgca gcatcaagct cacggccacc gtcgacgcgg
     5281 gcaaccccca ctgggggggc gagatcaaga ttctgaccgg cttcacccac gtcgtcttgc
     5341 agggcgcgga gctggagaac ttcggcaagg cgcatctcgg ggcctatccg atccatctcc
     5401 atcagctggg accggtggcc gccggcacgc tgaccatcaa cgccaatagc gtccatcaca
     5461 gctacaacaa gtgcctgacg ctccactcga gccaggacgt gaccgtggag aacatggtgt
     5521 gcgcccggat catcggccac atcttctatc aggaatacgg cgacgagagt ggcaccaagt
     5581 acctgaacaa cctcggcctc ggggccatga gtaacagctt cgatgtcccc gaccaccttc
     5641 ggggacagtt ctgggccggt gacaacctcg ctgcgaccat cgggtacaac ggattcaagg
     5701 tccccaacac cgacgaccag cagaacccag tccgcggcgt ctgcgcctgc cggggcgtga
     5761 aggaacccgc tcgggtggag tgcgcggatg cgccgagcca gaccggtgag ctcacgatct
     5821 tgggcaatca caccccatac acccctcctc acccagccgc ctgttcgagc gccgatgtct
     5881 acttcgagcc cgccagcggc ttctggatcg tcaatcccac caccgtgctg gagggcaact
     5941 cgatcggggg ctgccagggg gtcgggcgcg cttactggta
//
LOCUS       DASYRV010000468         2690 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1643800, whole genome shotgun sequence.
ACCESSION   DASYRV010000468 DASYRV010000000
VERSION     DASYRV010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2690
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1643800"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1426
                     /locus_tag="VGQ24_12585"
     CDS             <1..1426
                     /locus_tag="VGQ24_12585"
                     /inference="COORDINATES: protein motif:HMM:NF014307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HEV8455728.1"
                     /translation="DHRPDAQDVQEAGAREVMEAYFIQFAYIAAAALFILSLKWLSHP
                     STARRGVTVGELGMALAIAGTLVHHEIVSYQWILVGCVLGAAIGVPLAVFMPMTHVPQ
                     RTALSHALGALAAALVGTAEYYLHTEELSAFTMAALSLEVILGYLTFTGSLMAFGKLQ
                     DLLPGRPLVYRGQNVTNLSLLALAVAIGVYLVLDPGRSELFPLLAVLSLAFGVLLIIP
                     IGGADMPTVISLLNSYAGLSAAAMGFVLDNKLLIVAGALDGSSGFILSVIMCRAMNRS
                     FTNVLFGGFGQVQAGAGQATDRSVRSASPEEAAAILEAASSVIIVPGYGMAVAQAQHK
                     VRELYDALTRRGIDVKFAIHPVAGRMPGHMNVLLAEANVPYDKLFDMDEINSDFNRCD
                     VALVIGANDVVNPAARTDPASPIYGMPILNVDHARSVIVLKRGKGAGFAGIENALFFD
                     PKTALLFGDAKASLGRLVAELKGL"
     gene            1690..2580
                     /locus_tag="VGQ24_12590"
     CDS             1690..2580
                     /locus_tag="VGQ24_12590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEV8455729.1"
                     /translation="MANAPRTKRNAVKPAQIAKAVDEGRESLDLYLDEISRVPLLSRD
                     EEMELARKAFRGNVAAQERLARHNVRFVVSVAKKFQNRGVPLVDLIGEGNLGLMTAAR
                     KFDPDRGVKFISYAVWWIRQAVQAAIARHGRPVRVPLNRTADLSRLGRTTTLLKEKLG
                     RMPTTEELARATGLTPEAVRSLSALNSEAVRLDHPTRDGDGNERIERFAADQEGTDAG
                     TMANSQTQDIEAALATLPPRDAKVLRLYFGIEDGQSRTLEEIGRMMGVTRERIRQLRD
                     RALIRLREGETGERLKDLVA"
BASE COUNT          459 a          868 c          902 g          461 t
ORIGIN      
        1 tgatcaccga ccggatgctc aagatgttca agaagcggga gcccgggaag tgatggaggc
       61 ctacttcatc cagttcgcgt acatcgcggc ggcggccctg ttcatcctct cgctcaagtg
      121 gctgagccat cccagcaccg cccgccgcgg cgtcacggtg ggcgagctgg gcatggcgct
      181 ggccatcgcg ggcaccctcg tgcaccacga gatcgtgagc taccagtgga tcctggtcgg
      241 atgcgtgctg ggggcggcga tcggggtccc gctcgcggtg ttcatgccga tgacccacgt
      301 ccctcagcgc acggcgctgt cgcatgccct cggcgccctc gcggccgccc tggtgggcac
      361 cgcggagtac tacctgcaca ccgaggaact gagcgccttc acgatggcgg cgctcagcct
      421 ggaggtgatc ctcggctacc tgaccttcac ggggagcctc atggccttcg gcaagctcca
      481 ggacctgctg cccggccggc cgctggtcta ccgggggcag aacgtgacca acctgtcgct
      541 cctggctctc gcggtggcga tcggcgtgta cctcgtcctc gaccccggcc gcagcgagct
      601 gttccccctc ctcgccgtgc tctcgctggc cttcggcgtc ctgctcatca tcccgatcgg
      661 cggtgccgac atgccgacgg tgatctcgct cctgaactcc tacgccggcc tgtcggcggc
      721 ggccatgggc ttcgtgctcg acaacaagct cctgatcgtg gcgggcgcgc tcgacgggtc
      781 ctccggcttc atcctctcgg tgatcatgtg ccgcgccatg aaccgctcct tcaccaacgt
      841 cctcttcggt ggcttcggcc aggtgcaggc gggcgccggg caggccaccg acaggagcgt
      901 ccggagcgcc tcgcccgagg aagcggccgc catcctcgag gccgccagct cggtgatcat
      961 cgtccccggc tacggcatgg ccgtggccca ggcccagcac aaggtccgcg agctgtacga
     1021 tgccctcacc cggcgcggga tcgacgtcaa gttcgccatc catccggtgg cgggccggat
     1081 gcccggccac atgaacgtgc tgctggcgga agccaacgtc ccctatgaca agctcttcga
     1141 catggatgaa atcaacagcg atttcaaccg ttgcgatgtg gccctcgtca tcggggcgaa
     1201 cgacgtggtc aatcccgcag cccggaccga cccggcaagc ccgatctacg ggatgccgat
     1261 cctgaatgtg gatcacgccc ggtcggtcat cgtcctaaag cggggtaagg gagccgggtt
     1321 tgccggcatc gagaacgcac tgttcttcga cccgaagacc gccctgctct tcggcgacgc
     1381 taaagcgtct ctggggcggc tggtggcgga gctcaagggg ctgtgatgcg tgtgccccga
     1441 agccactcgc tcgtctccta catagcgtga tcaccgagcg gctggatggc cgaaatggac
     1501 cggtctccag ccatttgtgt gcccccggac cgagaaatcg cgcaagctca ataagggtag
     1561 tgatttagct aacccattga tttctcgggg gttacgcgtt atattcgggg cttgggttta
     1621 tcggggctgg aatagagatt cccgaccagt gatagaccaa aacacgcaag gacgaaggag
     1681 gcttttgacg tggcgaacgc ccctcgcacc aagcgtaacg cagtgaagcc ggctcaaatc
     1741 gcgaaagcgg ttgatgaggg cagggaaagc ctggatctgt atctcgacga gatcagccgg
     1801 gttccgctcc tctcccgcga cgaagagatg gagcttgccc gcaaggcctt tcggggcaat
     1861 gtggccgccc aggagcgttt ggcgcggcac aacgtgcgtt tcgtggtgtc ggttgcgaag
     1921 aagttccaga atcgcggggt tccgctcgtc gatctgatcg gcgaggggaa cctcggtctg
     1981 atgaccgcgg cccggaagtt cgatcccgat cgcggggtga agttcatttc ctacgcggtg
     2041 tggtggatcc ggcaggcggt gcaggcggcg atcgcccggc acggccggcc ggtgcgggtg
     2101 ccgctcaacc ggacggccga tctgagccgg ctgggccgca ccaccactct gctcaaggaa
     2161 aagctgggcc ggatgcccac caccgaagag ctggcccggg caaccggcct gaccccggaa
     2221 gcggtgcgct cgctcagcgc gctgaattcg gaggcggtcc ggctggacca tcccacccgg
     2281 gacggggacg gcaacgagcg gatcgagcgc ttcgccgccg accaggaggg aaccgacgcc
     2341 gggacgatgg ccaacagcca gacccaggac atcgaggcgg cgctggccac cctgccgccc
     2401 cgcgacgcca aggtgctgcg gctgtatttc gggatcgagg acggccagag ccgcacactc
     2461 gaggaaattg gccggatgat gggcgttacc cgcgagcgga tccgccagct gcgggatcgg
     2521 gccctgatcc ggctgcgtga gggagagacc ggggagcggc tgaaggactt ggtcgcgtag
     2581 gacggtaaga cggtaggacg taagccgata caaaaacaaa aggcccccgg tgtccaggcg
     2641 gacatcgggg ggcttgtcat tgcgatctgt gggtgctttc ggtctctatt
//
LOCUS       DASYRV010000469         2141 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1138527, whole genome shotgun sequence.
ACCESSION   DASYRV010000469 DASYRV010000000
VERSION     DASYRV010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2141
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1138527"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..222
                     /locus_tag="VGQ24_12595"
     CDS             <1..222
                     /locus_tag="VGQ24_12595"
                     /inference="COORDINATES: protein motif:HMM:NF018178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HEV8455730.1"
                     /translation="HDIGQWNTFEITMKGSRLTVVLNGERVIENAELPGVPARGPIAL
                     QHHGSKKDGKWVSPPALVQVRNVQIKELK"
     gene            222..926
                     /locus_tag="VGQ24_12600"
     CDS             222..926
                     /locus_tag="VGQ24_12600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate-binding family 9-like protein"
                     /protein_id="HEV8455731.1"
                     /translation="MRPTALLVALLVLLAGAPARAKDATVIESRRVGSDFALTADPSA
                     PAWKGVRGVIADHDRFGAAVPGHRTEIRSRWTPQNLYLLFICPYEELYLHPDPSPSAE
                     TNKLWDWDVAEAFIGSDFKDIKKYKEFQVSPQAEWVDLAIDRGTQPPSHDVGWNSGYE
                     VKARLDRDRRVWYGAMRIPMPAIGIPAPRPGTEARINLYRCQGPPDHRKYINWQTVKN
                     ETFHTPEAFGRLRLRD"
     gene            1048..>2141
                     /locus_tag="VGQ24_12605"
     CDS             1048..>2141
                     /locus_tag="VGQ24_12605"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEV8455732.1"
                     /translation="MMKRAWTYRLVGLGLLILCAAGGPLAQAQILSGSLSGKVVDETG
                     ALVAGADVTLTNEASKDLRRTRTNGEGFFTFASVPPGSYAVRIELAGFKTTERTGVRI
                     RIGDSRSLGQITMAVGGRAEEAVVTAQIELVPLNSGEKSATLTSEEIQNIPIVGRTAT
                     ELLKILPGLTPLTVGAQNRPGFTGEVIGINGNGEYSGGGNNNQSAIGNYSGNGNRETS
                     MDLTIDGAPAMDPGCNCGTSVNPNPEMTQEFKVLQSNFGAEHAKGPVTMQVLSKSGGH
                     DFHGMAYTYLRDYHLNSNDWFANKVGSERVKNKFLYPGFNLGGPLLIPGTSFNKNRDK
                     VFFFVGFEYFKQRLDTGFVKSWVPTTAMRNG"
BASE COUNT          402 a          737 c          686 g          316 t
ORIGIN      
        1 cacgacatcg gccagtggaa cacgttcgag atcacgatga agggcagccg gctcaccgtc
       61 gtcctcaacg gcgagcgcgt gatcgagaac gcggagctgc ccggcgtgcc cgcgcgcggc
      121 ccgatcgccc tgcagcacca cggcagcaag aaggacggca aatgggtgtc gccgccggcg
      181 ctggtgcagg tccggaacgt ccagatcaag gagctcaagt agtgcgaccc acggcgctgc
      241 tggttgcgct gctcgtgctg ctggccggag cgccggcgcg cgcgaaggat gcgaccgtca
      301 tcgagagccg tcgcgtgggc tccgacttcg cgctcaccgc cgatccgagc gcgcccgcct
      361 ggaagggcgt ccgcggcgtg atcgcggacc acgaccgctt cggagcggcc gtgccgggac
      421 accgcaccga gatccgctcc cgctggacgc cgcagaacct gtatctgctg ttcatctgcc
      481 cctacgagga gctctacctc catcccgatc cttccccgag cgccgagacg aacaagctct
      541 gggactggga cgtggccgag gcgttcatcg ggagcgactt caaggacatc aagaagtaca
      601 aggagttcca ggtgtcgccg caggccgagt gggtggacct ggcgatcgac cgcggcacgc
      661 agccgcccag ccacgacgtc ggctggaact ccggctacga ggtgaaggcc cgcctcgacc
      721 gcgaccgccg cgtctggtac ggcgcgatgc gcatcccgat gccggccatc ggcatcccgg
      781 cgcccaggcc aggcacggag gcacggatca acctgtaccg ctgccagggc ccgcccgacc
      841 accgcaaata catcaactgg cagaccgtga agaacgagac cttccacact cccgaggcct
      901 tcggccgcct ccgcctgcgc gactgatgtc cccaaaattt ccttgacagc tttttaaagt
      961 tctctaagaa tctccctagc gtcatctgcc gtctcgtctt catcggcgtc ttgaaccgaa
     1021 gggttctctc cgtcctggga ggttccaatg atgaagcggg cttggacgta ccggctggtg
     1081 ggtctgggac tcctgatcct ctgcgcggcc ggaggtccgc tggcccaggc gcagatcctc
     1141 agcggcagcc tctccggcaa ggtcgtcgac gagacgggag cgctcgtcgc cggagcggac
     1201 gtgacgctga ccaacgaggc gtccaaggac ctccgccgca cccggaccaa cggcgagggc
     1261 ttcttcacct tcgcctccgt cccccccggc agctacgcgg tgcgcatcga gctggcgggc
     1321 ttcaagacca cggagcggac gggggtgcgc atccggatcg gcgacagccg cagcctcggc
     1381 cagatcacga tggcggtcgg gggaagggcc gaggaagcgg tggtcaccgc ccagatcgag
     1441 ctggtcccgc tcaactcggg agagaagagc gcgacgctga cctccgagga gatccagaac
     1501 atcccgatcg tgggtcggac cgcgaccgag ctgctgaaga tccttcccgg tctcacgccg
     1561 ctcaccgtcg gcgcccagaa ccgcccgggc ttcaccggcg aggtcatcgg catcaacggc
     1621 aacggcgagt attcgggcgg gggcaacaac aaccagagcg cgatcgggaa ctactccggt
     1681 aacgggaacc gcgagacctc gatggacctc acgatcgacg gggctccggc gatggacccc
     1741 gggtgcaact gcggcacgtc ggtcaacccc aaccccgaga tgacccagga gttcaaggtc
     1801 ctgcagtcca acttcggcgc cgagcacgcc aagggaccgg tgaccatgca ggtgctcagc
     1861 aagtccggcg ggcacgactt ccacggcatg gcctacacgt acctgcgcga ctaccacctg
     1921 aactcgaacg actggttcgc gaacaaggtg ggcagcgaac gggtcaagaa caagttcctc
     1981 tatcccggct tcaacctggg cggaccgctg ctcatccccg gcacgagctt caacaagaac
     2041 cgcgacaagg tgttcttctt cgtcggcttc gagtacttca agcagcgcct ggacaccggc
     2101 ttcgtgaagt cgtgggtgcc caccaccgcc atgcggaacg g
//
LOCUS       DASYRV010000470         2813 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_192469, whole genome shotgun sequence.
ACCESSION   DASYRV010000470 DASYRV010000000
VERSION     DASYRV010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2813
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192469"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..641
                     /locus_tag="VGQ24_12610"
     CDS             <1..641
                     /locus_tag="VGQ24_12610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455733.1"
                     /translation="QVASGFTETTSRQREWPVGTLRWTRTFSGGPLTLVATSAGIRRR
                     EGTSTQPSGGRDGARSATSSSTFTPDLQLSFRNGLGLTASYSTRSQRTENNGNATVLD
                     QDDVNGTLSYSFALPASLSRLRKRVRSTLTAISSKTLTCLEQGSSSDCTVVSDVRRQE
                     VRGGLDTDLLKTVTGGFQFGYSINDARHLSRRTSQIFLLLSFQLSLYAGDYR"
     gene            736..1662
                     /locus_tag="VGQ24_12615"
     CDS             736..1662
                     /locus_tag="VGQ24_12615"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEV8455734.1"
                     /translation="MRRIFPALPLFPVAVLSVISALSVSCREQPRPPREFNGETALGY
                     IRSQVAFGPRIPGTEAHRRMSEWLDGLLRQRADTVVVQEWKHVTSKGDTLPLSNFIAR
                     FKPAAEKRILMLAHWDSRPVADGPLSQDSTKPVLGANDGGSGVALLLGVAEVLKRTPP
                     AVGVDLLFVDGEDYGDFTKTPNDVLIGSRYYGAHQLGGPPLYAVLFDLIGDKDLQVYQ
                     EGNSLVGAPEVVGLVWDTAKDLGYGGYFISSPRHTLIDDHLELQKKGIRAIDVVDFDY
                     PAWHTPYDTIDKVSAASLQVVGDVAVALVRRE"
     gene            1733..2407
                     /locus_tag="VGQ24_12620"
     CDS             1733..2407
                     /locus_tag="VGQ24_12620"
                     /inference="COORDINATES: protein motif:HMM:TIGR00426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEV8455735.1"
                     /translation="MPTPERRALLLLLALAVAGQGVRYLVTKPGEPPGGVQLLATLGV
                     ESPIAQRDSAMRRGRPLAQSEQINVDLAPAGELARLPRVGPRLAKTIVADRQAHGPFG
                     SLDGLDRVAGIGPGLLKTIGPHVIFSGAAGRLGSGAVSPVLPGGPCFTSTVPRARCPA
                     APLNLNTASLAELDALPGIGPAKARAILRYREEHRGFAAVEGLAGVPGLSRAALARLK
                     ERVVAH"
     gene            2482..>2813
                     /locus_tag="VGQ24_12625"
     CDS             2482..>2813
                     /locus_tag="VGQ24_12625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspE"
                     /protein_id="HEV8455736.1"
                     /translation="MATAAAGGDRLGEILLREGLVTREQLAQALTEQKNSKHRLGYVL
                     VKLGLVQELEITKVLARQYRMPAVDLTRFEVDPKIIKLVPADMATKSVVLPLKREGRT
                     LTVAMADPT"
BASE COUNT          481 a          911 c          911 g          510 t
ORIGIN      
        1 agcaggtggc gagcggcttc accgagacca cgagccggca gcgagaatgg cccgtcggga
       61 ctttgcggtg gacccgtact ttctccggcg gtcccctcac gctggtggcg accagtgcgg
      121 gtatccgccg ccgcgaaggc acctcgaccc aacccagcgg cggacgcgac ggggcgcgga
      181 gcgcaacctc atcctctacc tttactcccg accttcagct ctcgttcagg aatggactgg
      241 gactgacggc gtcgtattcc acccgctccc agcggaccga gaacaacggc aacgccaccg
      301 tgctggacca ggacgacgtg aacggtacgc tgagctattc gtttgccctg ccggcttcgc
      361 tgagccggct tcgcaagcgg gtgcgctcta ccctgacggc catctcatcc aagactctga
      421 cctgcctcga gcaggggtcc agcagcgact gtactgtggt ctccgacgtt cgacggcagg
      481 aggtccgtgg cgggctcgat accgatctgc tcaagaccgt gaccggcggc tttcagtttg
      541 gctattcgat caacgatgct cgtcatctca gccgccggac ctcacagatc ttcctgctgt
      601 tgtcgttcca gttgtcgctg tatgcggggg attatcggta aggacgggaa gagcttgccc
      661 tgagcgcagc gaagggacgg gaacggcggg aacgggaagg aatacagcgg cactcatctc
      721 caactaggct acagaatgcg ccgaatcttt cccgcccttc ccctctttcc cgttgccgtg
      781 ctttccgtca tctccgctct ctccgtctcc tgtcgagagc agccccggcc gccacgggag
      841 ttcaacgggg agaccgctct gggctacatc cggagccagg tggccttcgg cccgaggatt
      901 cccgggaccg aggcgcatcg gcgcatgagt gaatggctcg acggtctgct acgccagcgg
      961 gcggacacgg tcgtagtcca agagtggaag cacgtaacca gcaagggtga cacgcttccg
     1021 ctgagcaact tcatcgcccg gttcaagccc gccgcggaga agcggatcct catgctggcc
     1081 cattgggaca gccggccagt cgccgacggt cccctgtcgc aggactcgac caaaccggtg
     1141 cttggtgcca acgacggggg ctcgggtgtg gcgctgttac tgggcgtggc cgaggtgctc
     1201 aagcgaactc ctccggccgt cggagtggat ctcctcttcg tggacgggga ggactatggc
     1261 gacttcacca agacaccgaa cgatgtgctt atcggatcgc gctactacgg agcgcatcag
     1321 ctggggggcc cgccgctgta cgcggtgctg ttcgacctca tcggtgacaa ggatctgcag
     1381 gtctaccagg agggcaactc gctggtcggt gcaccggaag tggtagggct ggtctgggac
     1441 acggccaagg atctgggcta tggcggctat ttcatcagct cgcccagaca cacgctcatc
     1501 gacgaccatc tggagctgca gaagaagggc attcgtgcga tagacgtggt ggacttcgac
     1561 tacccggctt ggcacacgcc ttacgacacg atcgacaagg tgagcgcggc cagtctccaa
     1621 gtggtcggcg acgtggccgt ggcgttggtg aggcgggaat gacccgtctt tcccatcctt
     1681 cccgcgtgaa ttcgcctacc gccgcaccgc cctacctccg taccgtcttc ccatgcccac
     1741 tccagagcgc cgggcattgt tacttcttct cgccttggcc gtggctggcc agggggtccg
     1801 ttacctggtt accaaacccg gtgagccgcc cggcggggtg cagctgctcg ctacactcgg
     1861 cgtcgaatcg cccatcgccc agcgagacag cgccatgcgg cgggggcggc cgctggcaca
     1921 gagtgagcag atcaatgtgg atctcgcccc ggcaggggaa ttggcccggt tgcccagggt
     1981 ggggccccgg ctggccaaga ccatcgttgc cgaccggcag gcacacggtc ctttcggcag
     2041 cctcgatggt ctggaccggg tggccgggat tgggccgggc ctgctcaaga ccatcggtcc
     2101 gcacgtgatc ttcagcgggg cggcggggcg gttgggcagc ggggcagtta gtccggtgct
     2161 acctggaggt ccttgtttca cttcgactgt cccgcgggcc cgctgccccg cggccccgct
     2221 gaacctcaac accgccagcc tcgcggagtt ggacgcgtta ccgggaatcg gtccggcaaa
     2281 ggctcgggcc atactccggt accgtgagga gcaccgggga tttgccgccg tcgagggact
     2341 cgccggtgtg ccggggctga gtcgagccgc cctggcccgc ctcaaggaaa gggtggtcgc
     2401 ccactgatgt cctgctaagg ttcccggtgc caccggccga tattacctgc tgactatctg
     2461 tgtccccaaa ccaacgagat catggcgacg gcagcagccg gtggtgatcg gctcggcgaa
     2521 attctcctcc gtgaaggcct cgtcacgcgc gagcagcttg cacaggcgtt gacggagcag
     2581 aagaacagca agcaccggct cggctacgtg ctggtgaagc tcgggcttgt tcaggagctc
     2641 gagatcacca aggtgctcgc ccgccagtat cggatgccgg ctgtcgatct cacccgtttc
     2701 gaggtcgatc ccaagatcat caagctggtc ccggccgata tggctaccaa gagcgtcgtc
     2761 ctgccgctca agcgagaggg acgcacgctc accgttgcca tggccgaccc gac
//
LOCUS       DASYRV010000471         1744 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_4131541, whole genome shotgun sequence.
ACCESSION   DASYRV010000471 DASYRV010000000
VERSION     DASYRV010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1744
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4131541"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..421)
                     /locus_tag="VGQ24_12630"
     CDS             complement(<1..421)
                     /locus_tag="VGQ24_12630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455737.1"
                     /translation="MPRSTLCLLLALTVPVLVAAQDPPADAHPTYRLTQAYVRELARQ
                     NSLRFELPVTIKGRTQSVHGAESDCEMHLAGSSGVKIGFPGQVVVEPPNLCANPAPAA
                     LGTSWGAVFDNHAMNVPCTAVGFPRLYAEHLANGKPPA"
     gene            602..1069
                     /locus_tag="VGQ24_12635"
     CDS             602..1069
                     /locus_tag="VGQ24_12635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455738.1"
                     /translation="MSGYRVGSALLIVGLCGTVAAEGQGREFPFHYAVKLVCGIQRER
                     GGVVPQSYATTINIHNPSDSVAQFVKSWVMTLPPGGQRPMKPRRLSVDTLGPTLALAT
                     DCVDVHRRSGSGVPPFFEGFVLIDSSHSLDVVAVYSVPGGIDIVHVPERSRFR"
     gene            complement(1071..>1744)
                     /locus_tag="VGQ24_12640"
     CDS             complement(1071..>1744)
                     /locus_tag="VGQ24_12640"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEV8455739.1"
                     /translation="PRSPRMNLRPRVLLVDDHHLVLDGLRLALQLDCEVVGEAANGGQ
                     VVEACRRLAPDVVLLDLSLPDRSGLEVILDLKAAGLPLRIIVVTMYTDRVLAEACLQA
                     GAHGFVPKDAGTDELRKAIREVLANRQFVSPLVPHLGPRHASGAHAFELARLTPRQRQ
                     IVELLGDGKSTACIAAELHLSHYTVTFHRTRIRKVLGIDSEWGLMRYAMIVRISEAEA
                     AREAH"
BASE COUNT          277 a          566 c          602 g          299 t
ORIGIN      
        1 tcgccggtgg cttgccgttg gccaggtgct cggcgtagag ccgcgggaag ccgaccgccg
       61 tgcaggggac gttcatggca tggttgtcga agaccgcgcc ccagctggtc cccagcgcgg
      121 cgggcgccgg gttagcgcag agattcgggg gttcgaccac gacctggccg gggaagccga
      181 tcttgacccc actgctcccg gcgaggtgca tctcgcagtc cgactcggct ccgtgcaccg
      241 actgggtgcg gcctttgatg gtcacgggga gctcgaagcg cagtgagttc tgccgggcca
      301 gctctcgcac gtaggcctgg gtgaggcggt aggtcggatg cgcatccgcc ggcgggtcct
      361 gggccgcgac gaggaccggg accgttaggg caagcagcaa gcagagcgtg gatcgtggca
      421 tgaggacttt ccaaccgggg acctcaaagc tacttcgccg gccgggccgt tcctcctcca
      481 agatcttgta gtggcaatcc ccctgcaact tgttggagac ttgtcccgcc tcggcctcag
      541 gcgacattgt cacccggttg gtggaccctt cccacggggc gatcgcccgg agcatcgagc
      601 catgtcaggt tatcgcgtag gcagcgcgct gcttatcgtt gggctgtgcg gcacggtggc
      661 ggcggaggga cagggcaggg aattcccctt ccattacgcg gtgaagctcg tctgtgggat
      721 tcagcgggag cgcggcggag tggttcccca gagctacgcc acgaccatca atatccacaa
      781 tccttccgac tcggtcgctc agttcgtcaa gagctgggtc atgaccctgc cgccgggcgg
      841 gcagcgcccg atgaagccca gacgcctgtc ggtggacacg ctgggcccga ccttggccct
      901 cgccaccgat tgtgtggatg tgcaccggcg ctcgggctcc ggcgtgccgc ccttcttcga
      961 gggattcgtt ctgatcgaca gcagtcacag cctcgacgtg gtcgcggtgt actcggttcc
     1021 cggcgggatc gacatcgtgc acgtaccgga gcgcagccgg ttccgctgag tcagtgcgcc
     1081 tcgcgggcgg cctccgcctc gctgatccgg acgatcatcg cgtagcgcat caggccccac
     1141 tcggaatcga tccccaggac tttgcggatc cgggtccggt ggaaggtcac cgtgtaatgg
     1201 ctgaggtgga gctccgcggc tatacaggcc gtgctcttgc catcccccag gagttccaca
     1261 atctggcgct ggcgcggggt gagtcgcgcg agctcgaagg cgtgggcgcc ggacgcgtgc
     1321 cgaggcccca gatgagggac gagaggggag acgaactgtc ggttcgccag cacctcccgg
     1381 atcgctttgc gcagctcgtc ggttcccgcg tccttcggca caaaaccatg ggcgccagcc
     1441 tgaaggcagg cttcggcgag aacccgatcg gtgtacatgg tcaccacgat gatgcggagc
     1501 ggcagcccgg ccgccttgag gtccaggatg acctcgaggc cgctccgatc cggcaggctc
     1561 aagtcgagca gcaccacgtc gggagcgagt cgccggcatg cctcgacaac ctggccgccg
     1621 ttcgcagcct ccccgacgac ctcgcaatcg agctgcaggg ccagccgcag gccgtccagc
     1681 accaggtggt ggtcgtccac cagaagaact cgcggccgta gattcatacg cggtgatcgc
     1741 ggag
//
LOCUS       DASYRV010000472         7631 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_193487, whole genome shotgun sequence.
ACCESSION   DASYRV010000472 DASYRV010000000
VERSION     DASYRV010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7631
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193487"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(282..539)
                     /locus_tag="VGQ24_12645"
     CDS             complement(282..539)
                     /locus_tag="VGQ24_12645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455740.1"
                     /translation="MGEELGIFGGPLDELIVYEAGSQVRIRFVQGIVDEDHPVLGPPA
                     AHWAGTFPDWTINFEDGADLGGAGEPDFIDVVLGVHATVVP"
     gene            complement(599..1540)
                     /gene="hemF"
                     /locus_tag="VGQ24_12650"
     CDS             complement(599..1540)
                     /gene="hemF"
                     /locus_tag="VGQ24_12650"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: protein motif:HMM:NF003727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HEV8455741.1"
                     /translation="MTDALRFRERVSSRIEQLHDQATELFTALDRGGAFREDRWDRPG
                     GGGGVSRMLVDGATFEKAGINRSAVEGVLSPQLAQRIGAHATASEASRFFVSGLSLVV
                     HPRSPMVPTVHLNVRYFEIAGPLGEPIDAWFGGGTDLTPTYPFPEDASHFHRALKVAC
                     DRHDPAFYARFKTWCDHYFVNTHRDEERRGVGGIFFDNLRAGERGLSLERLLEFIGDV
                     GSVLSDAYAPIVERRRGATYGERERRFQLARRGRYVEFNLVHDRGTLFGLSTGARIDS
                     VLMSLPPLAAWEYAPVYQPGSFEAELLQMLEPRDWAG"
     gene            complement(1537..2616)
                     /gene="hemE"
                     /locus_tag="VGQ24_12655"
     CDS             complement(1537..2616)
                     /gene="hemE"
                     /locus_tag="VGQ24_12655"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HEV8455742.1"
                     /translation="MPLPLPSDHCWQIADVVNDLFLRACRRERVERPPVWMMRQAGRY
                     LPAYRAVRQRADFLTMVGTPELATEITLQPVDLLGVDAAIIFSDILVIPAAMGMQLTV
                     EDGIGPRFPHPLRSPGDFGRLRDFTPEDELGHVLEALRLTRKELAGRVPLIGFAGAPW
                     TLMSYMIEGGGSNSFTTAKRLLVEDPARAHALLGRLAQAVGGFLVAQVKAGAQAVQLF
                     DSWSGALGPADFREFALPYLSQAARLAKAAGAPVIVFCPGSGWALEEIAAASGADVVG
                     LDWQTDAGEARRRLPVTQLALQGNLDPCWLYAPPAMIRERTQRMLDQFGGQGHIANLG
                     HGILPDVPVSHAQAFIDAVREWRKR"
     gene            complement(2573..3325)
                     /locus_tag="VGQ24_12660"
     CDS             complement(2573..3325)
                     /locus_tag="VGQ24_12660"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006782 - protoporphyrinogen IX
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEV8455743.1"
                     /translation="MTDTVVVTASAGAFPGLVAALRRIPVAVEERPLMNFAPPADWAA
                     LDAALDRVGEYGAVVFTSPRAAEPFAARLKERRTEWPAEHSAPAVWASGPQTAAALHG
                     ALGRVRLPLGRGRGQLGAAKVLARALLEEKVAGPVLFPCGEAHRDELPAALRQNGIMV
                     DEIVCYRSVLAAESEARVAASRGSVLVVASPRVADLLARACPRGARPELLAVGPTTAE
                     SARAAGWSPSAVASEPTARALASAIRSLLANR"
     gene            complement(3325..4305)
                     /gene="hemC"
                     /locus_tag="VGQ24_12665"
     CDS             complement(3325..4305)
                     /gene="hemC"
                     /locus_tag="VGQ24_12665"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: protein motif:HMM:TIGR00212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEV8455744.1"
                     /translation="MSQRRSALRIGTRGSTLAVWQTEWVRARLRESGYESERIEIKTT
                     GDLVGDVPLARIGSRALFTKQIDDALLEGRIDLAVHSFKDLPTQLPDGITVAAVGQRE
                     DPRDALVGRGPLEWDDLPQGGVVATSSLRRRAQLLHSRPDLTVVDVRGNVETRLAKLD
                     NQPAWSGILLAAAGLVRLGLERRIGERLPPALMLPAPAQGALVVTVRAGDTAAETAAH
                     RAVHHPESALSVAAERGFLRRLEGGCQVPVGAYAELDQQSGRPSLRLHGRVVALQGDR
                     MVEGREAGVVSDENEAGALGSALADRLLSEGASEILAEARSAVAPAVSEP"
     gene            complement(4302..5729)
                     /gene="hemG"
                     /locus_tag="VGQ24_12670"
     CDS             complement(4302..5729)
                     /gene="hemG"
                     /locus_tag="VGQ24_12670"
                     /EC_number="1.3.3.4"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004729 - oxygen-dependent
                     protoporphyrinogen oxidase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase"
                     /protein_id="HEV8455745.1"
                     /translation="MASIAIVGGGITGLTAAYRLKQRGSRVVVYEASDRIGGAIKSER
                     RNGYLAELGPNSLATPTAGVAALLAELGLDSHRVAAAAEARTRYIVRRGRLMRLPMSP
                     AELLTSRLFSNAAKLAIFGEPLLDASETAVDESVAAFVRRRFNQEVVDYLANPFVAGT
                     FAGDPEQLSIRHALPQLQALERTQGSLVKAFVRMMKGHRANIQGQGSPGSIMSFREGL
                     QELPDALGRELSAEVRLRSPVTQLRQSPRGWTVGAALQTPELYDAVIYAAPAHSLDEI
                     DLDLPGGERLSTLSSIVHPPVAVLALGFRREQVSHPLDGFGFLTPEVERRRVLGVVFS
                     STIFPDRAPEGHVMLTAFVGGTRDPDFVQADPQTLTARVLDDLRVLLGAQGEPTFRAV
                     QVWPKAIPQYVLGYGRFKDIADEVERRNPGLLLAGTYRDGVSLAEAMGSGERAATRAA
                     ELLGVEPVAAGSKHPARTASAAGQD"
     gene            complement(5717..7021)
                     /gene="hemL"
                     /locus_tag="VGQ24_12675"
     CDS             complement(5717..7021)
                     /gene="hemL"
                     /locus_tag="VGQ24_12675"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEV8455746.1"
                     /translation="MTEVRVAGQLTAASERLFAAAQRVLPGGVNSPVRAFRGVGGTPR
                     FITRGEGPSLVDADGNRYVDLVLSWGPLILGHAHPEVLAAVIEAAKRGTTYGAPTELE
                     VRLAERVVATFPGLQMVRFVSSGTEAVMSAVRLARAATRRSLILKFDGCYHGHSDALL
                     AAAGSGVATLGLPDSPGVTPATVADTLVVSYNDLAAVQTLFASRGSEIAAVLVEPVAG
                     NMGVVPPVPGFLQGLRAAAHRHGALLIFDEVMSGWRVHPQGAQVLYGVEPDLTCLGKV
                     IGGGLPAAAYGGTRELMELIAPAGPVYQAGTLSGNPVAMAAGLATLDVLSRPGVWQRA
                     ADWAQRAATALTAAAEHAGVPLTVQRVGTMFTAFFTERPVRTFAEAKRTDAKAYAGFF
                     HAMLENGVYLPPSAYEAAFASTVHGTAELDVLESALRAAWPR"
     gene            complement(7018..>7631)
                     /gene="hemB"
                     /locus_tag="VGQ24_12680"
     CDS             complement(7018..>7631)
                     /gene="hemB"
                     /locus_tag="VGQ24_12680"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEV8455747.1"
                     /translation="SHGHCGVVRDGSVDNDATLEILSRAALSHARAGADIIAPSGMMD
                     GMVGAIRGALDQAGHSETAILSYAVKYASAFYGPFREAAESAPAFGDRRQYQMDPANV
                     REALLEAALDEAEGADLLMVKPALAYLDVVRAVRERTQLPLVAYNVSGEYAMVKAAAR
                     LGWIDECRVVLEALTGMRRAGADAIISYHAKDVATWLSSEGAR"
BASE COUNT         1333 a         2666 c         2471 g         1161 t
ORIGIN      
        1 aagggtacga cgagcataca agttagccgc tgacgcggcg caccccaagt ggggcgcgtg
       61 caaagatgtg tgcaagaatg gggcgctccc acgccttctc tcccgcaact cgcccaagtc
      121 ggctccagcg cctacgcgca acaaaaagcg gcccctgttc tcagctatgg agagaaggag
      181 gccgcctcac cgccgacctg cgccctcaag ggccatgcag tcggcgaaga tgcgccaggt
      241 ctcggagcca gtcgcttggt agccgctgat ccgggtcgcg gctacggaac cactgtcgcg
      301 tggaccccca gaacgacgtc gatgaaatcc ggctcgcctg ctccccctag atcggcgcca
      361 tcctcgaagt tgatcgtcca atcggggaag gttcccgccc agtgggcagc aggagggccc
      421 aagaccgggt gatcctcatc gacgatgccc tgtacgaacc gtatccgcac ctgagagccc
      481 gcctcgtaca caatcagttc gtcgaggggg ccgccgaata tcccgagctc ctcgcccacc
      541 gtcctccggc acacgcccaa gaagacctgg tccgatatcg ggggcggggt gacaactcct
      601 accctgccca atcccggggc tccagcattt gaagcagttc cgcctcaaag gatccgggtt
      661 gatagaccgg agcgtactcc cacgccgcga gcggcggaag gctcatgagc acgctgtcga
      721 tgcgggcgcc ggtcgaaagg ccgaacaggg tcccccggtc gtgcaccaga ttgaattcta
      781 cgtagcgtcc ccgcctcgcc agctgaaatc ggcgctcccg ctccccatag gtcgcacccc
      841 gccgccgttc gacaatcgga gcataggcgt cagagagcac gctaccgaca tcgccgatga
      901 attccagcag ccgttccagg gaaagtccac gctccccggc gcgcaggttg tcgaagaaga
      961 tgcccccgac accgcgtcgc tcctcatccc ggtgggtgtt cacgaagtaa tgatcgcacc
     1021 aggtcttgaa gcgagcataa aaggcagggt cgtggcggtc gcatgccacc ttgagagctc
     1081 ggtgaaagtg agacgcgtcc tccgggaagg ggtaggttgg cgtgaggtcg gtcccgccgc
     1141 cgaaccaggc gtcgatcggc tctcccagag gaccggcgat ctcgaaatat cgaacgttca
     1201 gatggacggt cggaaccatg ggacttcggg ggtggaccac caggctgagg ccgctaacaa
     1261 agaatcgcga cgcctcggaa gccgtggcat gcgcaccgat ccgttgcgcc agttgcggtg
     1321 acagcacccc ttcgacggct gagcggttga tgcctgcctt ctcgaacgtg gcgccatcga
     1381 ccagcatccg gctcactcca ccgccacctc ccggccgatc ccaccggtct tcccggaatg
     1441 ccccgccgcg atccagcgcc gtgaagagct cggtggcctg gtcgtggagc tgctcgatcc
     1501 gcgacgacac tcgctcgcgg aaccggagcg catccgtcac cgttttcgcc attccctgac
     1561 cgcgtcgatg aatgcctgag cgtggctgac cggcacgtca ggcagaatcc cgtgcccgag
     1621 attggcgatg tgcccctgcc ctccgaactg gtcgagcatc cgctgggttc gctcccggat
     1681 cattgctggt ggagcgtaca accagcaagg atccaggttc ccttgcaggg ccagctgcgt
     1741 gaccggcaat cggcgcctgg cttcgcccgc gtccgtctgc cagtccagcc caaccacatc
     1801 ggcacccgac gcggccgcga tctcttccag cgcccacccg gacccgggac agaagacgat
     1861 caccggggcg cccgccgcct tggccagccg ggcggcctgg ctcagatagg ggagagcgaa
     1921 ctcgcggaag tccgcgggtc ccaacgcacc ggaccaggaa tcgaagagct ggactgcctg
     1981 agcacccgcc tttacctggg ccaccagaaa accaccgacc gcctgagcca gccgacccag
     2041 aagcgcgtgg gcgcgggccg gatcctccac cagcagccgc ttggccgtcg tgaacgagtt
     2101 ggagccgccg ccttcgatca tgtagctcat gagggtccag ggtgcgcccg cgaagccgat
     2161 cagcggaact cgcccggcca actctttccg ggtcaatcgg agcgcctcga gaacgtggcc
     2221 cagctcatct tcgggagtaa agtcgcgaag ccgcccgaag tctcccggcg accgtagcgg
     2281 gtgcggaaag cgggggccga tgccgtcctc gaccgtcagc tgcattccca tggctgccgg
     2341 aatgaccagg atatcgctga agatgatggc tgcgtccaca ccgagtagat cgaccggttg
     2401 gagggtgatc tcggtggcca gctcgggtgt gcctaccatc gtcaggaagt cggctcgctg
     2461 gcggacggca cggtacgcgg gcagatagcg cccggcctgc cgcatcatcc agaccggagg
     2521 ccgttccact cgctcgcggc ggcatgccct gaggaagaga tcgttcacca cgtcagcgat
     2581 ttgccagcag tgatcggatg gcagaggcaa gggcacgggc agtgggttcc gacgctactg
     2641 cggaaggaga ccagccggcg gcgcgggccg attctgccgt cgtcggcccg accgcgagaa
     2701 gctcgggccg agcgccccgg ggacaggcgc gcgcaagtag atcggctacg cgcgggctgg
     2761 cgacaacgag aacgctgcct cgcgaggccg ccacccgtgc ttccgattca gccgcgagga
     2821 ccgaccggta gcagacgatt tcatctacca tgatgccatt ctgccgcagc gctgcgggca
     2881 actcgtcccg gtgcgcctcc ccacagggaa agagcaccgg tccggccacc ttttcctcga
     2941 gcagtgcccg ggcgagcacc tttgccgcgc ccagctgtcc ccggccccgc cccagcggga
     3001 gacgaacccg ccccagcgca ccgtgaagcg cggcggccgt ctggggtccg gacgcccaca
     3061 ccgcgggcgc actgtgttcg gctggccact ctgtgcggcg ttccttaagc cgtgccgcga
     3121 acggctccgc agccctggga gaagtgaata ccacggcgcc gtactcgccg acacggtcga
     3181 gtgcggcatc gagcgccgcc cagtcggccg gcggcgcgaa gttcatcagg gggcgttcct
     3241 cgaccgccac gggaatccgt ctgagcgccg cgaccagtcc cggaaacgct ccggcagagg
     3301 cggtgaccac gaccgtatcg gtcatcaggg ctcggagacc gccggcgcca ccgccgaccg
     3361 tgcctcggcc aggatctcgg acgcaccctc cgagagcagc cgatcggcca gggccgatcc
     3421 cagtgcgccg gcctcgttct catctgacac gacacccgcc tcgcggcctt ccaccattct
     3481 gtcgccctga agagctacaa cccggccgtg cagccggagc gatgggcgcc cactctgctg
     3541 atccagctcg gcgtacgccc cgaccggtac ctgacatcct ccctcgaggc ggcggagaaa
     3601 ccctcgctcg gccgccaccg agagggcgct ctccggatgg tgcacggccc ggtgcgccgc
     3661 ggtctcggcc gccgtgtccc ccgcgcgtac cgtgaccacc aaggctccct gagcaggtgc
     3721 cggaagcatc agtgctgggg gcagccgctc tccgatgcgt cgctcgagcc ccaacctcac
     3781 gagccccgcg gccgccagca ggatcccgct ccaggcaggc tgattgtcga gcttggccag
     3841 acgggtctcc acattgccgc gaacgtccac gaccgtgaga tcgggtctcg aatggagtaa
     3901 ctgcgcccga cggcgaaggc tgctggtagc gaccacgcca ccctggggca aatcatccca
     3961 ctcaagtggc ccccgcccga ccagcgcgtc acggggatcc tcgcgctgcc cgactgcggc
     4021 cacagtgatt ccgtcgggca actgcgtcgg caggtctttg aaggagtgca cggcgaggtc
     4081 gatacggccc tcgagcaacg catcgtcgat ctgtttcgtg aacagagccc gactcccgat
     4141 gcgggccaac ggtacatccc ccaccaggtc gccagtagtc ttgatctcga tacgctcgga
     4201 ttcgtacccc gactcgcgaa gccgggcccg aacccactcc gtttgccaga ccgccagcgt
     4261 gcttccccgg gtgccgatcc gaagcgcaga acggcgttgg ctcaatcctg ccccgccgcg
     4321 gaagcagtac gggccgggtg cttggatcct gccgccaccg gttctacgcc gagcagttcc
     4381 gccgcgcggg ttgcggcccg ctcgcccgag cccatggcct cggcgaggga cacaccgtcc
     4441 cggtaggtcc ccgccagcag caaccctgga ttgcggcgct ccacctcgtc ggcgatgtcc
     4501 ttgaagcgac cgtatccgag cacgtactgg ggaatcgcct tgggccagac ctggaccgca
     4561 cggaaggtgg gctcaccctg ggctcccagc agaacacgca ggtcgtcgag cacgcgagcg
     4621 gtgagcgtct gcggatcggc ctgcacgaag tcggggtcgc gggtgccgcc aacgaacgcg
     4681 gtgagcatca catgtccttc gggcgcccgg tcggggaaga tcgtggacga gaacacgacg
     4741 ccgagaaccc gacgacgttc gacttcggga gtgaggaagc cgaagccatc gagtgggtgg
     4801 gatacctgtt cgcggcggaa gccgagagcc agaaccgcta ccggtgggtg aacgatgctg
     4861 gacaaggtgg agagtctctc gccaccgggc aggtcgaggt cgatctcatc caggctgtgc
     4921 gccggggccg catagataac cgcgtcgtag agctccgggg tctgcaacgc ggccccgaca
     4981 gtccagcctc tcgggctttg ccgcagctgg gtcaccggag agcgcagcct gacctcggcc
     5041 gagagctcgc gtcccagcgc gtctggtagc tcctggagac cttcgcggaa cgacatgatg
     5101 ctgcccggac tgccctgtcc ctgaatgttt gcccgatgcc ctttcatcat ccgcacgaag
     5161 gctttcacca gcgagccctg ggtgcgctcg agtgcctgaa gctgcggcaa cgcgtgacga
     5221 atcgacagtt gctcggggtc accggcaaag gtcccggcaa caaacgggtt cgccaggtaa
     5281 tccaccactt cctggttgaa gcgccggcgc acgaacgccg cgacgctttc gtcaacggca
     5341 gtctcacttg catctaacag cggctcgccg aagatggcca gcttggcggc attagaaaaa
     5401 agccgggagg tgagcaactc ggcaggagac atcggcagcc gcatcagccg gccgcggcgt
     5461 acgatgtagc gggtccgcgc ctctgccgcg gcggcgaccc ggtgtgagtc cagtccgagc
     5521 tcagccagca gcgccgcgac tcccgcggta ggtgtcgcca gggagttcgg accgagctcg
     5581 gcgagatagc cgttgcggcg ttccgatttt atggcgccgc cgattcgatc gctcgcctca
     5641 tacacgacga ctctgctccc ccgctgcttc aaacggtacg cggcggtgag ccccgtgatg
     5701 ccgcccccga cgatcgctat cgaggccatg cggctctaag cgcggactcg agcacgtcga
     5761 gctccgccgt cccgtgcacc gtggatgcga acgccgcctc gtacgctgaa gggggcagat
     5821 acaccccgtt ttcgagcatg gcgtgaaaga acccggcgta ggccttggca tcggtgcgct
     5881 tggcttcggc gaaggttcgc accggccgtt cggtgaagaa cgcggtgaac atggtgccga
     5941 cccgctgcac cgtcagtggc acacccgcgt gctcagccgc ggcagtcagc gcggttgcgg
     6001 cacgctgggc ccagtcggcg gctcgctgcc agactcccgg acgggagagc acatccaggg
     6061 tcgcgaggcc cgcggccatg gcgaccggat tgccggaaag cgtacccgcc tggtagacgg
     6121 gacccgcggg agcgatgagc tccatcagct cgcgtgtccc gccgtaggcg gcggccggca
     6181 atccaccacc gatgacctta ccaaggcagg tgaggtccgg ctcaacacca tacagaacct
     6241 gggcaccctg cgggtgcact cgccatccgc tcatgacctc gtcgaagatc agcagcgcgc
     6301 cgtggcggtg ggcggctgcc cggagaccct ggaggaaccc cggcacgggc gggactactc
     6361 ccatgttccc ggcgaccggc tcgaccagca ccgccgcgat ctccgatccg cggctggcga
     6421 acaaggtctg gaccgccgcc aggtcgttgt atgaaaccac cagcgtgtcg gccacggtgg
     6481 cgggagtcac gccaggcgag tcgggcaggc cgagcgtcgc cacgcccgag ccggccgccg
     6541 caagcagcgc gtccgagtgg ccgtgatagc agccgtcgaa cttgaggatc agggatcgtc
     6601 gagtagcggc gcgagccagc cgaacggcgc tcatgacagc ttcggtaccg gagctgacga
     6661 agcggaccat ctgcagtccg gggaaggtgg cgaccacccg ctccgccagt cggacctcca
     6721 gctcggtggg tgcgccgtag gtcgttcccc gcttcgccgc ttcgatcact gcggcgagga
     6781 cttcgggatg ggcatgaccg agaatgaggg gtccccacga cagcaccaga tccacgtagc
     6841 ggttcccatc ggcgtcgacc agcgaaggtc cctcgcccct ggtgatgaag cgcggggtcc
     6901 cgccgacgcc cctgaacgcg cgcaccggac tgttgacgcc accgggcagc actcgctgtg
     6961 cggcggcgaa gagccgctcg gatgccgccg tcagttgacc cgctacgcgc acctcggtca
     7021 tcgagcgcct tcggaggaga gccaggtggc cacgtccttc gcatgataag agatgatggc
     7081 atccgcccca gcccggcgca tgccggtcag cgcctcgagc acgacccggc actcgtcgat
     7141 ccagcccagc cgggccgccg ccttcaccat cgcgtattcg ccgctcacat tgtaggccac
     7201 cagcggaagc tgggtccgtt cccgcaccgc ccgcaccaca tcgaggtagg ccagcgccgg
     7261 cttcaccatc aggagatcgg ctccctcggc ttcatccagg gccgcttcga gtaacgcttc
     7321 tctgacattg gccggatcca tctggtactg ccgccggtcg ccgaaggccg gggcgctttc
     7381 cgcggcttcg cggaaaggcc catagaaggc gctggcgtac ttgacggcgt agctcaggat
     7441 ggcggtctcg ctgtgccccg cctggtccag tgcgcctcgg atggcgccga ccatgccatc
     7501 catcatgccg ctcggggcga tgatgtcggc ccctgctcgc gcgtgactca gtgcagcgcg
     7561 ggacagtatc tccagggttg cgtcattgtc cactgagccg tcccgtacga cgccgcaatg
     7621 cccgtggctg g
//
LOCUS       DASYRV010000473         6659 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3716961, whole genome shotgun sequence.
ACCESSION   DASYRV010000473 DASYRV010000000
VERSION     DASYRV010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6659
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3716961"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1184
                     /locus_tag="VGQ24_12685"
     CDS             <1..1184
                     /locus_tag="VGQ24_12685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455748.1"
                     /translation="AVLTFVSGVILGCGGGDNNPVAPEPPPDEGQTPVAGCSDGVLEH
                     DALYRICFPDNWNGDLVLYAHGYVEPASPLALPDDQVNGQSISGTVNSLGYAYATTSY
                     RANGLVVPEATEDLVELETTARRLYRPDPSRTFILGVSEGGLVATLAAERHPQSFEGA
                     LAACGPLGSFRRQLDYFDDFRVVFDYLFPGVIPGSAVDIPASVVAHWEDIYTPAVVAA
                     LATHPTAARELVRITGASVGSDDIPSIALTAIAVLWYNVIGTANAQARLGGQPFDNST
                     RVYSGSSDDVALNAGVARFTADPGTLAEIAQFETTGNLTVPLVTLHTTGDPVVPFEQE
                     ALYADKVAQAGATARLSQSGISRYGHCAFQGSELLAAFSTLIQKVGPPVAAMASASGG
                     G"
     gene            1184..1675
                     /locus_tag="VGQ24_12690"
     CDS             1184..1675
                     /locus_tag="VGQ24_12690"
                     /inference="COORDINATES: protein motif:HMM:TIGR00040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HEV8455749.1"
                     /translation="MRLGVIADTHGLLRPEVVHAFAEVDHIIHAGDIGSLELLTELEA
                     LAPVTAVYGNTDGFEVRQRVPQVARVELDGFDIIVTHGDQFGSPTPEKLNAAFPDAQI
                     IVYGHTHRPLLTVVDVVVTVMNPGGAGARRFSLPPSVGILELEPGIPPRGRLLPLLDF
                     DSE"
     gene            1679..2308
                     /locus_tag="VGQ24_12695"
     CDS             1679..2308
                     /locus_tag="VGQ24_12695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455750.1"
                     /translation="MLLLLISVLQVAPGDTVVIRTLDRSPLPGQAVDTVRYGRPQVRI
                     RTRQGTALVWLLRAADTVVVAAQIPDSTPYWGDDFVLSVDTRGDAAASPQHDDFQLYF
                     RRVLDSSVVFRGRSGRWEPPRGDPDWRLGSDRTGGGWEVSARDSAKGWSLLLRLDPAW
                     LQGAEERLPRLALRIYDNDPQGWFAWPRPQGAAPPSSVEQTPSLWAPIR"
     gene            complement(2335..3375)
                     /locus_tag="VGQ24_12700"
     CDS             complement(2335..3375)
                     /locus_tag="VGQ24_12700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455751.1"
                     /translation="MCRVRALAENRPAVYRMFDSTGRVLYVGKAKRLRTRLLTYFRAS
                     FPDDKAARILYAASEIQWDYVPSEFAAYLGELRQIRKFRPYFNHKANGTRRSILIKIA
                     GGPAPRVYGGGSVTRDDIRCYGPFRSMSRMLEAVRTLNDLLGLRDCAATMPVVFAGQG
                     DLFEAPRQAGCMRHEFGFCTGPCAGLVAEWDYRRRVETAMAFLEGRTIQPIDRVVAAM
                     QEAAANAEFEIAARWREKFEQLEWLLAATSRARTAVDLLTFVYRDPGDFGDDRVYILR
                     RGVVQASFPFPATPIEHEAFRGAVAEEARRPDAPVGPLPLDSIDEVLLMMAWFRAHPD
                     ALRRTSPYEQWM"
     gene            complement(3438..4262)
                     /gene="mutM"
                     /locus_tag="VGQ24_12705"
     CDS             complement(3438..4262)
                     /gene="mutM"
                     /locus_tag="VGQ24_12705"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR00577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HEV8455752.1"
                     /translation="MPELPEVETIVRDIRPALVGRRIRRATLSHDDVLRGVTRRRLIR
                     RLTGATIKSVSRRAKHAVLELDSGRLVVQPGMTGSLMVHRRPLQPEGAKYAVLRAKLD
                     RGGELVYQDVRRLGTLLFLDEKEWQRYSGLIGPEPLEEEFSVEQFGTTLGRSRQAIKK
                     VIMDQRHLAGVGNIYANEALFAAGIDPSKPASSLKPEDHRRLHGEIRRILGAAIASNG
                     TTVRDYRTGTGESGSFQLELLVYGREGEPCRVCGTRLTGTHEIDARISVFCHRCQS"
     gene            complement(4273..5577)
                     /gene="purD"
                     /locus_tag="VGQ24_12710"
     CDS             complement(4273..5577)
                     /gene="purD"
                     /locus_tag="VGQ24_12710"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR00877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEV8455753.1"
                     /translation="MRALVVGGGGREHALCWSLRRENPQADLYCAPGNPGTAGIAHNL
                     PIAADDLDRLADAADMYAIDLTVIGPEVPLARGLADRLRAEGRAVLGPSAAAAQLEAS
                     KAFAKRVMATAGVRTAAGESFTELKQALAYVDRHAEPLVVKASGLAAGKGAIVCTTRQ
                     EAARAVRSMLETGEFGDAGRTVVVEAFLEGEEISVLAVTDGRELELLPVSQDHKRLLP
                     GDRGPNTGGMGAYSPVSLASPALLDRIKRDVLLPTLEAMRRLGSPFTGVLYAGLMIDP
                     AGVPSVVEFNCRLGDPEAQVVLPLISGGLTDCLWRVAKGERPSRMDTTRAAAVTTVLA
                     SRGYPEHPEKGAAITLPRSLSEGAMIFHAGTSRSGDGVLRVDGGRVLTVTAVSPSFRE
                     AQQLSRETAEAIEFDGKLFRDDIGWREAARLEERQPVPARRG"
     gene            complement(5574..6590)
                     /locus_tag="VGQ24_12715"
     CDS             complement(5574..6590)
                     /locus_tag="VGQ24_12715"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEV8455754.1"
                     /translation="MTTNVPAPRPRQRFPEIAAVSWEHPADRAALQTLRAVPGVDELI
                     RKVLAMLGGERGIRLLFQGNAIRVGPTQFPKLWHLHTEVCNTFDWPTVPELYVTQTPF
                     FNAGAYGIDTPFIVVHSAAIELLDDDELRVLLSHELGHVISGHSLYRTIAAILALVSL
                     GVLPVLGELVVLPIRLAFLEWSRKSELSSDRAGLLGSQDVVAAQRLDMRMAGGGRGAG
                     FAGQLDVDAFMQQAHEYTSSSEGLDVVYKLLSTLALTHPMHTVRAAELQRWVASGEYD
                     RILRGEYVRRGTEVGERPWREDMAAAGSYYAGEARELAGHLAEAARRAADRAREAFKN
                     AQKP"
BASE COUNT         1106 a         2259 c         2155 g         1139 t
ORIGIN      
        1 gcgccgttct gacttttgtc tccggtgtaa tcctcgggtg tggcggcggt gacaataacc
       61 ccgtggcacc ggagccgccg cccgatgagg gccagacacc ggtggccggc tgcagcgatg
      121 gcgtgctgga gcatgatgcc ctgtaccgga tctgcttccc cgacaactgg aacggtgatc
      181 tggtgctata cgcccacgga tacgtcgagc cggccagtcc actcgcgctg ccggacgatc
      241 aggtcaacgg gcagagcatc tctggcacgg tcaacagcct cggctacgcc tacgccacga
      301 ccagctaccg ggccaatgga ttggttgtcc ccgaggccac cgaggatctg gtcgagcttg
      361 agactacggc gcggcggctc tatcggcccg acccgagcag aacgttcatt ctgggagtct
      421 cagaaggcgg actggtggcg acgctggcgg ccgagcgcca tccccagagc ttcgagggcg
      481 cgctggcggc ctgcggcccg ctcgggagct tccgcaggca gctcgattac ttcgacgact
      541 tccgggtcgt gttcgactac ctcttccccg gtgtcatccc cggttctgcg gtggacattc
      601 ccgcctcggt cgtggcccac tgggaggaca tctacacgcc ggcggtcgta gcggcgctgg
      661 cgactcaccc gaccgccgca cgggagctgg tgaggatcac cggagcttcg gtagggagcg
      721 acgacattcc ttcgatcgcc ttgactgcaa tcgccgttct ctggtacaac gtcatcggca
      781 cagcgaacgc tcaagcccgc ctgggcggtc agccgttcga caactcgacc cgggtctatt
      841 ccggctcctc ggatgacgtc gccttgaacg ccggggtagc ccgtttcacc gccgaccccg
      901 gcacgctggc ggaaatcgcc cagttcgaga cgacgggcaa cctcaccgtg cccctggtga
      961 cgttgcacac cacgggtgat ccggtcgttc ctttcgaaca agaggcactc tatgccgaca
     1021 aggtggccca ggccggggcc acggcgcgcc tcagccagag cggcatcagc cgctacggcc
     1081 actgtgcttt tcaaggtagc gagctcctcg ccgccttctc gactctcatc cagaaggtcg
     1141 ggcctccggt tgccgccatg gcttcagcgt cgggcggcgg ctgatgcgtc tgggcgtgat
     1201 cgccgatacc cacggcctgt tgcgccctga agtggttcac gcctttgccg aggtggatca
     1261 cattatccat gcgggggata tcggctccct cgagctgttg accgagctcg aggcgctcgc
     1321 gccggtgact gcggtctacg ggaacaccga cgggtttgaa gtccggcagc gggtgcccca
     1381 ggttgcccgg gtggagcttg atggcttcga catcatcgtg acgcatggcg accagtttgg
     1441 ctcaccgacg ccggagaagc tcaacgcggc cttccctgat gctcagataa tcgtttatgg
     1501 ccacacccac agaccgctgc tcacagttgt ggatgtggtt gtcacggtca tgaatccggg
     1561 gggtgccggt gctcgacgtt tcagcctacc accttcagtc ggcatcctgg agctggagcc
     1621 tggcatacct cctcgaggca ggttgctccc gttgctcgac ttcgattcag agtagaccgt
     1681 gctgctgctt ctgatctcag tgcttcaggt ggcacccggc gacacggttg ttatccggac
     1741 gctcgatcgt tccccgcttc cgggccaagc ggtagacact gtccggtacg gtcggccaca
     1801 ggttcgcatc cgcacccgac aaggcaccgc gctggtctgg ctcctacgag cggcggatac
     1861 ggttgtcgtg gccgcgcaga ttccggattc gacgccgtat tggggagatg actttgtctt
     1921 gagcgtggat acgaggggag atgccgctgc cagccctcag cacgatgatt ttcagctcta
     1981 cttccgccgg gtgctcgaca gcagcgtggt gttccggggg cggagcgggc ggtgggaacc
     2041 gccgcggggc gatcccgatt ggcggctcgg ctctgatcgt acggggggcg gttgggaggt
     2101 gagcgcgcgg gatagcgcca aaggctggag cctgctcttg cggctcgacc ccgcctggct
     2161 ccagggcgct gaagaaagat tgcctcggct ggctctccgg atctacgaca acgacccgca
     2221 gggctggttc gcctggccgc ggccgcaagg cgccgcgccg ccatcatcgg tcgagcagac
     2281 gccgagtctg tgggccccga tcaggtaaac gggtacgcgc tcacccgcct cttatcacat
     2341 ccattgctcg tacggactgg ttcgccggag cgcgtcgggg tgagcccgga accaggccat
     2401 catcagcagc acctcgtcaa tcgagtccag cggcagcgga ccgaccggcg catcgggccg
     2461 gcgcgcctcc tcggccacgg cgccacgaaa ggcctcatgc tcgatgggcg ttgcgggaaa
     2521 ggggaacgac gcctggacta ctcctcgccg taagatgtag acccggtcat cgccgaaatc
     2581 gccggggtcg cgatacacaa acgtgagcag gtccactgcc gtgcgcgccc ggctcgtcgc
     2641 ggccagcagc cactcgagct gctcgaactt ctcccgccag cgcgccgcaa tctcgaactc
     2701 cgcgttcgcg gccgcctcct gcatggcggc gaccacccga tcgatcggtt gaatagtccg
     2761 gccttccaga aaagccatcg cggtttcaac tcgtcgccgg taatcccatt cggcgaccag
     2821 tccggcacac ggtccggtac agaatccaaa ctcgtgccgc atgcatccgg cctggcgcgg
     2881 agcctcgaac agatcgcctt gcccggcaaa caccactggc atcgtggcgg cgcagtcgcg
     2941 gagtcccagc aggtcgttca gcgtccgcac cgcctcgagc atccgcgaca tggagcggaa
     3001 cgggccgtag cagcggatat catcgcgggt cacgctgccg ccaccgtaca ccctgggcgc
     3061 gggccctccc gcgatcttga tgagaatgga gcgccgggtg ccgttggcct tgtggttgaa
     3121 gtagggacgg aacttccgga tctgccgcag ctcgccgagg taggcggcga actcgctggg
     3181 cacgtagtcc cactggatct cgctcgcggc atagagaatc cgagccgcct tgtcatccgg
     3241 gaaactggcc cggaagtagg tcaacagccg ggtgcggagc cgcttggcct tgccgacgta
     3301 gaggactcga ccggtggagt cgaacatccg gtagactgcc ggacgattct ccgccagcgc
     3361 gcgcacccga cacaacaact ggtccaggtc agtcgacgga agcggcgcga gccgctgggc
     3421 cctgccgcct ccacgcctca cgattgacag cggtgacaga acacagagat gcgcgcatcg
     3481 atctcgtgcg tcccggtcag ccgggtaccg cagacccggc agggctcacc ctcacggcca
     3541 tacaccagca gctcgagctg aaagcttccc gactcgccgg tgccggtccg gtagtcgcgg
     3601 acagtcgtcc cgttagatgc gatggccgcc cccaggatcc gacggatttc cccgtgcagc
     3661 cggcgatggt cctccggctt gaggctgctg gccggcttcg acggatcgat gccggccgcg
     3721 aacaacgcct cgttggcgta gatgttcccg actcccgcga ggtgccgctg atccatgatc
     3781 accttcttga tcgcctggcg gctgcgcccc agggtcgtgc cgaactgttc caccgagaac
     3841 tcctcttcca gaggctctgg accgatcaag ccgctgtagc gctgccactc cttttcatcc
     3901 aggaagagca gggtgccgag acggcggacg tcctggtaca ccaactctcc cccgcgatcg
     3961 agcttggcac gaaggacggc atacttcgcc ccttcgggct ggagcggacg acggtggacc
     4021 atgagggagc ccgtcattcc gggttgaacg acgagccggc cggagtcgag ctcgagcacg
     4081 gcatgtttcg cccgccggga gaccgatttg atcgtcgcgc cggtgagcct gcggatcaga
     4141 cggcgccggg tcacgccgcg cagcacgtca tcgtggctca gggtagccct gcggatgcgg
     4201 cggccgacca gggcaggccg gatgtctcga acgatggttt cgacttcggg aagctcaggc
     4261 aatgctgcgg acctacccgc gccgcgccgg aaccggctgc cgctcttcga gccgagccgc
     4321 ttcccgccaa ccgatgtcat cgcgaaagag cttgccatcg aattcgatgg cttctgccgt
     4381 ctcacggctc agctgttggg cttcccggaa gctggggctg acggcggtga cggtcaacac
     4441 tctgcctccg tcgacccgca gcacaccatc cccgctccgg ctggttcctg catggaagat
     4501 catggcccct tccgagagac tccggggtaa cgtgatcgct gcgcccttct cggggtgctc
     4561 cgggtagccc cgagaggcga gaaccgtagt caccgccgcg gctcgggtgg tatccatccg
     4621 cgaaggccgc tcacccttgg ccacacgcca caaacagtcg gtcagaccgc cagagatcag
     4681 cgggagtacg acttgcgcct cggggtcgcc gagccggcag ttgaactcga ccaccgacgg
     4741 aacacccgcc ggatctatca tcaatccggc gtacagcacc ccggtaaacg ggcttccgag
     4801 ccggcgcatg gcctcgaggg tagggagcaa cacgtcgcgc ttgatccggt cgagcagggc
     4861 gggactcgcc agggacactg gactgtaagc gcccatcccg ccggtattgg gcccgcggtc
     4921 accgggaagc aagcgcttgt ggtcctgaga taccggcaat agctccagct cccgcccgtc
     4981 ggtgacggcc aggaccgaga tctcctcacc ctcgagaaag gcctcgacca ccacagtccg
     5041 cccggcgtct ccgaactctc ccgtctccag catcgaccgc actgcacgcg cggcctcctg
     5101 gcgggtggtg catacgatcg ctcccttccc agccgcgagg cccgatgcct tcaccaccaa
     5161 cggctcggcg tgccggtcga catacgccaa cgcctgtttc agctcggtga agctctcgcc
     5221 ggcggcggta cgaaccccgg cggtagccat cacccgtttg gcaaaggcct tcgacgcctc
     5281 cagctgggcc gccgccgcac tcggtcccag tacggcccgg ccctcggctc tgagccggtc
     5341 cgccagccca cgagccagag gaacttcggg accgatcacg gtgaggtcga tggcgtacat
     5401 gtccgccgca tccgccagcc ggtcgagatc gtcggcggcg atcggcagat tgtgggcaat
     5461 gccggcggtg ccggggttgc ccggcgcaca gtacagatcg gcctgcgggt tctcgcggcg
     5521 gagcgaccag cagagggcgt gctcccggcc tccgcccccc acaaccagtg ctctcacggt
     5581 ttctgcgcgt tcttgaaggc ttcgcgtgcc cgatcggccg cgcgacgggc ggcctctgcc
     5641 agatgcccag ccagctcccg ggcctcaccg gcgtaataac tcccagccgc cgccatgtct
     5701 tcgcgccacg ggcgctcgcc gacctcggta ccccgccgca catactcgcc ccgaagaatc
     5761 cggtcatact ctccgctggc gacccagcgc tgcagctccg cggcccgcac ggtatgcatc
     5821 gggtgggtca gcgccagggt gctcaggagc ttgtagacga cgtccagccc ttcgctgctg
     5881 ctggtgtatt cgtgggcctg ctgcatgaat gcgtccacgt cgagctggcc ggcaaatccg
     5941 gccccccggc ccccgccggc catcctcatg tcaagccgct gtgccgcgac gacgtcctga
     6001 ctgcccagga gtccggcccg gtcggaggac agctccgact tccgggacca ctcgaggaag
     6061 gcgaggcgga tgggaagcac gacgagctcg ccgagcaccg gtagaacgcc caggctgacc
     6121 agtgccagga tggctgcgat ggtgcgatac agagagtgtc cgctgatgac gtggcccagc
     6181 tcgtgggaga gcaatacccg cagctcgtcg tcgtcgagga gctcgatagc ggccgagtgc
     6241 accacgatga acggggtgtc gatcccgtac gcacccgcgt tgaagaaggg ggtctgggtg
     6301 acgtagagct ccggcaccgt cggccaatca aaggtgttgc acacctccgt atgaaggtgc
     6361 cagagcttgg gaaactgggt gggacctacc cggatagcat tgccctggaa gagaaggcgg
     6421 atccctcgct cgccgccgag catcgccagc accttccgga tcagctcatc gactccgggg
     6481 acggccctga gggtctgcaa cgccgctcga tcggccggat gttcccagga tactgcggcg
     6541 atctcgggga agcgctggcg gggccggggg gctggcacgt tggtcgtcat ggtcaactca
     6601 gtggtggaag gtgccgggcc ttacgggttg cgcgccctcc agtttcaaat tggaactcg
//
LOCUS       DASYRV010000474         5656 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3008429, whole genome shotgun sequence.
ACCESSION   DASYRV010000474 DASYRV010000000
VERSION     DASYRV010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5656
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3008429"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3104)
                     /locus_tag="VGQ24_12720"
     CDS             complement(<1..3104)
                     /locus_tag="VGQ24_12720"
                     /inference="COORDINATES: protein motif:HMM:NF021665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G8 domain-containing protein"
                     /protein_id="HEV8455755.1"
                     /translation="MNMTMRALLAATVLFIVSTVTGAALARDVHLEKCPKRVLEQLAH
                     DADDDLLIDVDCTVPAGTYTWRNVRIINKGTLRFEDTLNGVINFTAASISIEDGGDLV
                     AGTADLPFGSNGGQLNITFTGAPPNTCEMLDSHGDWCGKGIIVRKGATLYLYGAKGAT
                     TSAVSWTHLSDAAGPTVAGAKVPGTGATTLKLARDVTQGKGAWKANDWIAVATTSFNP
                     FETEFVQIDTVNSAEGGTTITLKQGLKHYHFGGKDPGPPSAENYNGARSTAEFNYGVD
                     ERAEVGLISRSVRLTAAVDAANPHWGGEIKILNGFTQAVLQGVELEKFGKAHLGAYPI
                     HLHQLGPVAADTLAINANSVHHSYNKCLTLHSSQNVTVENMVCARIIGHIFYQEYGDE
                     SGIKYLNNLGLGAMSNSFDVPANLRGQFWAGDNLAATIGYDGFKVPNTDDQRNPVRGV
                     CACRGVEEPARVACKDAPSPTGELTILGNHNPYTPAHPAACSSADVYFEPASGFWIVN
                     PTTVLEGNSIGGCQGVGRAYWYVPPKNDPAAGVPENLRFLANVPIGSFKNNRAHGCFS
                     GLYAEEEYGVFSFQLFPTTNSLSDGKNLITTFEGFTATRIRDRGVWIRPMWSALKHGR
                     FATNKASVILVSSGGLDGNAPGVWALLQDSVLIGMSQNNVERWGPCPVNASKGPGCVD
                     LTPVANDIIGDGYPLPAFNLLGYQIYDGPVRIFNNRFVNFNRDVTQHLTDADKTFLSS
                     YTAYSQGFPATPKKRYEGDAALGWFKANQSAYPNATVSKGLTFDNVDIRHQIFTQAVN
                     YGDFQDGDRNTVIIDEDGSLTGFAVLSSADQRVRGAHPVSLNNLGFNQAGNSVDECLA
                     EGQQDTDVEARPTSLISPYGVATLELQANFPPSTGPDPNPAQPATKQRMTFSKDSKDF
                     CPGPLCDHQKMELTSRNTLGVWEPKVVSGGGYTVAASPCSNPPDCTQGQGGIPARVSV
                     GLTDAVKPVISPEDPFAVRIGICYTDTTGKHPAGNFTITRGYRSWGGNGSNTADLDLQ
                     QFFN"
     gene            complement(3115..4260)
                     /locus_tag="VGQ24_12725"
     CDS             complement(3115..4260)
                     /locus_tag="VGQ24_12725"
                     /inference="COORDINATES: protein motif:HMM:NF019221.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BBP7 family outer membrane beta-barrel protein"
                     /protein_id="HEV8455756.1"
                     /translation="MRNALAAALVLALALQGGVAAAQADRPGSERPGPFSFSAEALIW
                     WFKSSPTPVPIIADAPLSLSDSKVLLGGENLDTNPNPGFRLTAAYALNERWGLEGNFL
                     YVPSRSTSNSVSSSGQLGSTDLLLPFFDVTQNQENFTEISFSPVFRGSAREELTNSLM
                     GAEANGTWALATGRPWQIDLLAGFRWLRLHETYTITTSSPFIPPSPQDIWNTTDQFDT
                     FNNFYGAQLGVRGRYDWGRFFASGAVKFAMGAMVQTVDINGSLVTNDFNDFGQPQTFP
                     GGYFALPTNIGSHTRSVFAVVPEVGLNIGYRITSWAAVSVGYTFLYTNNVVRPGNQIN
                     RNINPTQSTAYSGDPAPQRQGPAQPSFKFNSSDFWAQGINAGLSFRF"
     gene            4259..4819
                     /locus_tag="VGQ24_12730"
     CDS             4259..4819
                     /locus_tag="VGQ24_12730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455757.1"
                     /translation="MSAPLDKDIGTAPSPRGTLHEAGRSRHAICGIDQTAGTGAALPQ
                     GGRPPSAEVRADPGPDGGPLGRLLDVGATPTPRAGCATAASREPMMQSQLPANAWVQF
                     LDTGVSTGLGHGLAGAVAVAPVANNPAAQLGEVRWGGIVGTQWWISPRSGIAVLMMAQ
                     RQMAIWHPFSLEFKRLAYQAGAGVRV"
BASE COUNT          906 a         1743 c         1961 g         1046 t
ORIGIN      
        1 ttgttgaaga actgctgcag gtccagatcg gcggtattcg acccgttgcc gccccaggag
       61 cgatagccgc gggtgatcgt gaagttaccg gcgggatgct tcccggtggt gtccgtatag
      121 cagatcccga tcctgaccgc gaaggggtcc tccgggctga tcacgggctt gacagcatcg
      181 gtgagcccca cgctcacgcg cgccgggatg ccaccctgac cctgcgtaca gtcgggcgga
      241 ttggagcacg gggaggccgc caccgtgtag cctccgccgc tgacgacttt cggctcccag
      301 actcccaggg tgttacggct ggtcagttcc atcttctggt gatcgcagag aggcccgggg
      361 cagaaatcct tggagtcctt ggagaacgtc atgcgttgct tggtggcggg ctgggcgggg
      421 ttggggtccg gccccgtact gggcggaaag ttggcctgga gctcgagggt ggcgacaccg
      481 tagggcgaga tgagcgacgt ggggcgcgct tcgacatccg tgtcctgctg accctcggcc
      541 aggcactcgt ccacggagtt gccggcctgg ttgaagccga gattgttgag cgagaccgga
      601 tgggcaccgc gcacgcgttg gtcagcgctg ctgagcactg cgaagccggt gagcgagccg
      661 tcctcgtcga tgatcacggt gttgcggtca ccgtcctgaa aatcgccgta gttgaccgcc
      721 tgggtgaaga tctggtggcg gatgtccacg ttgtcgaagg tcaagccctt gctgacggtg
      781 gcgttggggt aggcgctctg gttggccttg aaccagccca gcgccgcgtc cccttcgtaa
      841 cgcttcttgg gcgtcgccgg aaagccctgg gagtacgcgg tgtagctgga gaggaaggtc
      901 ttgtcggcat cggtcaaatg ttgcgtgacg tcgcggttga agttgacgaa gcgattgttg
      961 aagatgcgga ccgggccatc gtagatctgg tacccgagca ggttgaaggc cggcagcgga
     1021 tagccgtcgc cgatgatgtc attggcgacc ggggtgagat ccacgcagcc cgggcccttg
     1081 gacgcattca cggggcaggg cccccatcgc tcgacgttgt tctggctcat gccgatcagc
     1141 accgagtcct ggagcagagc ccacacaccg ggggcgttgc cgtcgaggcc cccggagctg
     1201 accaggatga cgctggcctt gttggtcgca aagcggccgt gcttgagagc ggaccacatc
     1261 ggacggatcc agaccccgcg atcgcgaatg cgggtggcgg tgaagccttc gaacgtcgtg
     1321 atgaggttct tgccgtcgga caagctgttg gtggtgggga acagctggaa ggagaagacg
     1381 ccgtattctt cctcggcgta cagcccggag aagcagccat gtgcgcgatt gttcttgaac
     1441 gatccgatgg ggacattggc gaggaagcgc aggttttcgg gcactccggc cgccgggtcg
     1501 ttcttgggcg gtacgtacca gtaagcgcgc ccgaccccct ggcagccccc gatcgagttg
     1561 ccctccagca ccgtggtggg attgacgatc cagaagccgc tggcgggctc gaagtagaca
     1621 tcggcgctgg aacaggcggc tgggtgagca ggagtgtatg ggttgtgatt gcccaagatc
     1681 gtgagctcac cggtcggact cggcgcatcc ttgcacgcca cccgagcagg ttcctccacg
     1741 ccccggcagg cgcagacgcc acggaccggg ttccgctgat cgtcggtgtt gggaaccttg
     1801 aatccatcgt agccgatggt cgcggccagg ttgtcaccgg cccagaactg tccccgaagg
     1861 ttggcgggga catcgaagct gttgctcatg gccccgagac caaggttgtt caggtacttg
     1921 atgccgctct cgtcgccgta ttcctgatag aagatgtggc cgatgatccg ggcgcagacc
     1981 atgttttcca cggtcacgtt ctggctcgag tggagcgtca ggcacttgtt gtagctgtga
     2041 tggacgctat tggcgttgat ggccagcgtg tcggctgcca ccggtcccag ctgatggaga
     2101 tggatcggat aggcgccgag atgggccttg ccgaacttct ccaactccac gccctgcaag
     2161 acggcctggg taaagccgtt cagaatcttg atctcgccgc cccagtgggg gttggcggcg
     2221 tcgacggcgg ccgtgagcct gacgctgcgg ctgatgagac cgacctcggc ccgctcgtcg
     2281 acgccgtagt tgaactccgc ggttgaccgg gcgccgttgt agttctcggc agacgggggc
     2341 cccggatcct tgcccccgaa gtggtagtgc ttgaggcctt gcttcagggt gatcgtcgtt
     2401 cccccctccg ccgaattcac ggtgtcgatt tggacgaact ccgtctcgaa ggggttgaag
     2461 ctggtggtag ccacggcgat ccagtcgttc gccttccagg cgcccttgcc ctgggtgaca
     2521 tcgcgggcca gcttgagcgt ggtcgctccc gtgcccggga ccttggcgcc cgccacggtg
     2581 ggaccggccg cgtcactcag gtgggtccag ctcaccgccg aggtcgtggc ccccttggct
     2641 ccatagagat agagcgtggc gccctttcgc acgatgattc ccttgccaca ccagtccccg
     2701 tgcgagtcga gcatctcgca cgtgttggga ggggctcccg tgaaggtgat gttgagctgg
     2761 ccgccattcg agccgaaggg gagatcggcc gtccctgcca ccagatcgcc cccgtcctcg
     2821 atcgagatcg acgccgcggt gaagttgatg accccgttca gcgtgtcctc gaaccggagg
     2881 gtccctttgt tgatgatccg gacgtttcgc caggtgtagg tgcccgcggg caccgtgcag
     2941 tcgacgtcga tcagcagatc gtcatcggca tcatgtgcca gctgctcgag cacgcgcttc
     3001 gggcacttct cgagatggac atcccgggcc agggcggcac ccgtcactgt gctcacgatg
     3061 aacagcaccg tcgcggccag cagcgctctc attgtcatgt tcatggcgtc ctcgctagaa
     3121 tcggaagctg aggccagcgt tgatgccctg ggcccagaag tccgaactgt tgaacttgaa
     3181 cgagggctgg gcagggccct ggcgctgggg ggcggggtct ccggaatatg cggtgctctg
     3241 tgtcggattg atgttgcgat tgatctggtt gccgggtcgg acgacgttgt tcgtgtagag
     3301 gaaggtatag cccacggaca cggcggccca ggaggtgatc cgataaccga tgttcaaccc
     3361 gacctcgggc accaccgcga acacgctacg cgtgtggctc ccgatgttcg tgggcagggc
     3421 gaagtagccc cccggaaacg tctggggctg cccgaagtcg ttgaagtcgt tggtcaccag
     3481 tgaaccgttg atgtccaccg tctgcaccat cgcccccatg gcgaacttta cggcgccgct
     3541 cgcgaagaac cgcccccagt cgtaccttcc tcgcaccccg agctgggcgc cgtagaagtt
     3601 gttgaacgtg tcgaattggt cggtcgtgtt ccagatgtcc tggggcgacg gtggaatgaa
     3661 ggggctgctg gtggtgatgg tgtaagtctc gtgcaggcgc agccatcgga agcccgccag
     3721 caggtcgatc tgccacgggc gccccgtggc cagggcccag gtcccgttcg cctccgcgcc
     3781 catcaggctg ttcgtcagct cttcccgggc gctgccccgg aagacagggg agaaggaaat
     3841 ctccgtgaag ttctcctggt tctgggtgac gtcgaagaag gggagcagca aatccgtcga
     3901 tcccagctgg ccggatgaag acacgctgtt actcgtcgag cgcgacggaa catacaggaa
     3961 attgccttcc aggccccagc gctcgttcag cgcgtaagcg gccgtcagcc ggaagcccgg
     4021 attaggattg gtgtcgaggt tctctccgcc gagaaggacc ttggagtccg agaggctgag
     4081 cggagcgtcg gcgatgatcg gcaccggggt ggggctactc ttgaaccacc agatcagcgc
     4141 ctccgcactg aaactgaagg gccccgggcg ctccgaaccg ggtcggtcgg cctgcgctgc
     4201 ggccactcct ccctgaaggg caagtgcgag aacaagtgca gccgccaacg cgttgcgcat
     4261 gagcgctcct ctcgataagg acatcggcac agccccgagc cctcgcggga ctctacacga
     4321 ggcggggcgg tcacgtcacg ctatttgtgg tatcgaccag accgccggca ccggggccgc
     4381 gctgcctcag ggtggccgcc cgccatcagc cgaagttcgg gctgatccag gtccggatgg
     4441 cggcccactc gggcgactgc tggatgtagg cgcaacgcct acgccgcgcg cggggtgcgc
     4501 gaccgcagca tcccgcgagc cgatgatgca aagccagcta cctgccaacg cctgggtgca
     4561 gttcctggac acgggcgtga gcacgggcct cggccacggg ctcgccggcg cggtggcggt
     4621 ggcgccggtg gccaacaacc ctgcggcgca gctgggcgag gtccgctggg gcggcatcgt
     4681 cggcacgcaa tggtggatct cgccgcgcag cggcatcgcg gtgctgatga tggcgcagcg
     4741 gcagatggcc atctggcacc cgttctcgct cgagttcaag cgcctcgcct accaagcggg
     4801 ggcaggggtg agggtatgac accgcgcagc gatgacctct tgctgacgcg ccgaggcgcg
     4861 ctgctggcct cggtcggcct ggtcgccgct tgcgccagcc cgcccgccgg cgtcgccgtt
     4921 cgacgcctgg gccgacgcct tcgccgccga ctgggtgcgc ctgtcgccgg aacgggccac
     4981 gttcagccag ttcctgccgg cggccgagca gcgcgcgctc gagcgcgaac tggcgacgcg
     5041 gtccgactcg cgaaggaagc gcacgctggc gctggggcgc tgcggcctcg ggcagccgcc
     5101 tatagcatcc cgctgacagc cgaactgggc gcgtcggcgc gccgggcggc tcatgtgcgc
     5161 tgtgcctgcg gctgcagcgg gctgccggct ccagctgggt gccgcgtgcg gggctgcggt
     5221 ctgacggcca gtggacgggg acgcaggcgc gggggagcga gggcacggag gtcggtgatg
     5281 ttggctccgc cgggtgacct gacggctccg agcgggtgac cgctgactgc gctccagcgc
     5341 tacgctgtgc agtagatcgt tcagcgtgaa gtaaacatta ctggccctca gagagcggcc
     5401 tcgtcggctc gtgcgcttcc tttcctccaa acatcaccac tcccagtact tcggccacct
     5461 cgcctttcct tgtccctcga gggcatggga attgctcatg aggggagctt ctctccactc
     5521 gcgtagcgta aagagagtga tgcagcggac catgagaaag catgacgcgc ccaacggtcg
     5581 tgatttcagt cctctgcgcc ctctattcgc ctgctctggc cgaggagctg tggcatcggc
     5641 tcctggggtc ctgtgg
//
LOCUS       DASYRV010000475         3342 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_4133549, whole genome shotgun sequence.
ACCESSION   DASYRV010000475 DASYRV010000000
VERSION     DASYRV010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3342
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4133549"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..524)
                     /locus_tag="VGQ24_12735"
     CDS             complement(<1..524)
                     /locus_tag="VGQ24_12735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455758.1"
                     /translation="MGQTCRRVGTVGLVFATLWAISLFMNTFVAEWLGEMAFMREIWP
                     FPGQLVATIGIASSLLMTALAARLSSKPKLLVDLGSGYLVLQCLLVSILSQWAPVPIS
                     PRVSWVVIPILFYPAIVPNTPKKTLVISLLAASTEPLALGLSYLRGVQVNLNTFYLLW
                     DFLPNYISAFLVVIP"
     gene            796..1368
                     /locus_tag="VGQ24_12740"
     CDS             796..1368
                     /locus_tag="VGQ24_12740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455759.1"
                     /translation="MALNPRIWQPIAIALLACHRATPPAPELARCGPNVPRSAQHPIA
                     SRTAALAGDYDLIQVRTQPVGGETSSGRLHLMPLDSTAREMAVGGAVRDLTGWLEPAA
                     GDSAWRSNVGSRDLKYPGVVLAGDHVRLGQPRLDGYSEHLTITAVSPEGFWGWWKAEP
                     GFDVTTDAEARRVLPDPAGYFCALRVTAER"
     gene            1365..1853
                     /locus_tag="VGQ24_12745"
     CDS             1365..1853
                     /locus_tag="VGQ24_12745"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEV8455760.1"
                     /translation="MKSPRASAGLLLFRRGPSGLKLFLAHPGGPFWQRRDAGAWTIPK
                     GLAEEGEDPLAAACREFEEETGVTPQRPFIPLGSVRQKAGKVVHAWAWEGDADPATVT
                     SNIMETEWPRGSGRRLTFPEVDRCAWFDPRAAREKINPAQATLIDRLEAELARQAPRP
                     PE"
     gene            1871..3013
                     /locus_tag="VGQ24_12750"
     CDS             1871..3013
                     /locus_tag="VGQ24_12750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P1 family peptidase"
                     /protein_id="HEV8455761.1"
                     /translation="MHHVLRPLMAVTLALGLAATPAEAQQQRARSVGVAPGVLRPGPH
                     NAITDVRGVRVGQSTVIVGDSIRTGVTAILPHPGNLFLDRVPAAIYVGNGFGKLLGST
                     QVAELGELETPILLTCTLCVWKAADALVAYLLGQPGMEEVRSINPVVGETNDGYVLNA
                     IRQRPITPDNVLSAIKGASGGPVAEGSLGAGTGTVAFGWKGGIGTSSRLTGPADSRWT
                     VGVLVQTNFGGDLHIMGVPVGRALRRNGVIRGEGTKGPKGSIMIVVATDAPLSDRNLR
                     RAAARAIIGLGRTGSVADNGSGDYVIAFSTHRDVRRRNGESRRSVAELDNEAMSGIFQ
                     AVVEATEEAIYNSLFMATPVTARHGTVQALPVDEVLNILRQHGALR"
     gene            3013..>3342
                     /locus_tag="VGQ24_12755"
     CDS             3013..>3342
                     /locus_tag="VGQ24_12755"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEV8455762.1"
                     /translation="MKPYADHFSRVASAYATCRPGYPPTLFSYLSDLLARHELAWDCA
                     AGSGQATLPLTGRFRRVLATDLSAAMLERAPRHPSVEYRVSRAEDSGLADSSADLVTV
                     AQALHWLD"
BASE COUNT          586 a         1080 c         1137 g          539 t
ORIGIN      
        1 gggatgacca cgagaaaagc actgatgtaa ttgggcagga agtcccagag gagatagaac
       61 gtgttgagat taacctgaac gccgcgaaga tagctcagtc cgagcgcgag cggctcggtg
      121 gaggctgcca gaagcgagat caccagcgtc ttcttcggcg tgttcggcac gatcgcgggg
      181 tagaacagaa tcgggatgac gacccatgac acccggggag agatgggcac tggcgcccac
      241 tggctgagaa tcgagaccag cagacactgg agcaccaggt agcccgaccc gagatccacc
      301 agaagcttcg gcttggagct gaggcgcgcg gccagggcgg tcatcagcag cgagctggcg
      361 atcccgatcg tcgcgacgag ctgtcccggg aagggccaga tctcgcgcat gaacgccatt
      421 tcccccagcc actcggcaac gaacgtgttc atgaacagcg agatcgccca tagcgtggcg
      481 aacaccaggc cgacggttcc aacccggcgg caagtttgcc ccattacatc ggtgggcaaa
      541 ctctgtccgg gtctggagct ttctgcggac cgaaccggcg tcgacggacg ccgcctgagg
      601 agtcgaaggg tcatgaacgg ttcacggcaa gagagtagcc ttaaggctac tacggtttag
      661 ggcttcgggc tatgcgttgt ttgagaggtc tagggtctag ggtcttcccg ccatgaagac
      721 ccatggttgc aacccattct ccctgaacgt acgttcgagc ggccgggttc cacgaacctc
      781 ccccctcgca tcatcatggc gctgaatccg agaatctggc agccgatcgc catcgcgctc
      841 ctcgcgtgcc atcgggctac acccccggcc ccggagctgg cgcggtgcgg accgaacgtc
      901 ccccgctcgg cacagcatcc catagcctct cgcacagccg cactcgctgg ggactatgac
      961 ctcattcagg tgcggaccca gcctgtcggc ggcgagacca gctcgggccg ccttcacctg
     1021 atgccgctcg attcgaccgc ccgggaaatg gccgtgggag gagcggtgcg cgatctgacc
     1081 ggctggctgg aacctgctgc cggcgatagc gcctggcgct cgaacgtggg atcgcgagat
     1141 ctgaagtatc cgggcgtcgt gctggccggg gaccacgtac ggctgggaca gccgaggctg
     1201 gacgggtaca gcgagcacct caccatcacc gccgtgtcac ctgaaggttt ctggggctgg
     1261 tggaaggccg agcctggctt cgacgtgacc acggacgcgg aggccaggcg ggtgttgccc
     1321 gatccggccg ggtatttttg cgcgttgaga gtgacagcgg agcggtgaag tccccgaggg
     1381 ccagtgcggg actcctgctc ttccgccggg ggccaagtgg gctcaagctg ttcctggccc
     1441 atccaggcgg gccgttctgg cagcggcgcg acgccggtgc ctggaccatt ccgaagggcc
     1501 tggcggagga aggggaggat ccgctggcgg ctgcctgccg ggaattcgag gaggagaccg
     1561 gggtgactcc ccagaggccg ttcattccgc tggggagcgt gcggcagaag gctgggaagg
     1621 tggtccacgc ctgggcctgg gagggagatg cggatccggc cacggtcacc agcaacatca
     1681 tggagaccga atggccccga ggctctggcc gccggctcac ttttccggaa gtggaccgtt
     1741 gcgcctggtt cgatccccgg gcggcacgcg agaagatcaa tccagcacaa gcgacgctca
     1801 tcgaccggct cgaggccgag ctggcccggc aggcgccccg ccctcctgaa tgaacactgc
     1861 gggataacca atgcaccacg ttctgaggcc gctgatggcg gtcactctgg cacttgggct
     1921 tgccgccact cccgccgaag cgcaacagca gcgcgctcgg tcggtcggcg tcgcgcccgg
     1981 ggtgctccgg cccggtcccc acaacgcgat caccgacgtg aggggtgtgc gggtagggca
     2041 gtcgaccgtc atcgtcggcg actcgatccg caccggcgtc accgccatcc tgccgcatcc
     2101 gggcaaccta ttcctcgatc gggtgcctgc cgcgatctac gtcggcaacg gattcggcaa
     2161 gctcctggga agcactcagg tggccgagct gggcgagctg gagacaccta tcctgctcac
     2221 ctgcacgctc tgcgtctgga aggcggctga tgcgctcgtc gcttacctgc tgggacagcc
     2281 cgggatggaa gaggtacgct cgatcaatcc ggtggtgggt gagaccaacg acggctacgt
     2341 gctgaacgcg atccgacaac ggcccatcac cccggacaat gtgctctctg ccatcaaggg
     2401 agcgtccggc ggcccagtgg cggaaggaag cctcggggcc ggcaccggta cggtcgcgtt
     2461 cggctggaag ggtggtatcg ggacttcgtc ccgtttgact ggcccggccg acagccgctg
     2521 gaccgtcggg gtgttagtgc aaaccaactt cggcggcgat ctccacatca tgggcgtgcc
     2581 ggtcggccgc gccctgcgcc gtaacggggt gatccggggc gagggtacca aggggccgaa
     2641 aggctcgatc atgatcgtcg tcgccaccga tgcgccgctc tcggatcgga atctccgccg
     2701 cgcggccgcg cgcgcgatta tcggcctcgg ccggaccggc tcggtggccg acaatggctc
     2761 gggagactac gtcatcgcct tctctaccca tcgggacgtc cggcgccgca acggggaaag
     2821 ccgccggtcg gttgccgagt tggacaacga ggccatgtcg gggattttcc aggccgtcgt
     2881 ggaagcgacc gaagaggcga tctacaactc gctcttcatg gcaacgccgg tcaccgcgcg
     2941 acatggcacg gtgcaggcgc ttccggtgga cgaagtgctc aatatcctgc gccagcacgg
     3001 cgcgcttcgc tgatgaagcc gtacgccgac cacttctcca gggtggcatc ggcctacgcc
     3061 acatgccggc cagggtatcc cccaacgctg ttctcctacc tgtcggacct tctcgcccgc
     3121 cacgagctcg cctgggactg cgcggcgggc agcgggcagg cgacactgcc actcaccggc
     3181 cggttccgcc gggtactcgc caccgacctg agcgcagcga tgctggagcg tgccccgcgt
     3241 catcccagcg tcgagtaccg ggtgagccgt gccgaagaca gcggcctggc cgactcgagc
     3301 gccgatctgg tgacggtggc tcaggcactg cactggctgg ac
//
LOCUS       DASYRV010000476        10294 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3718254, whole genome shotgun sequence.
ACCESSION   DASYRV010000476 DASYRV010000000
VERSION     DASYRV010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10294
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3718254"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..296)
                     /locus_tag="VGQ24_12760"
     CDS             complement(<1..296)
                     /locus_tag="VGQ24_12760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455763.1"
                     /translation="MSQGWFRRLKSAGVGLAFALGLVTAGLLHLPYSSAAQQQQAPYG
                     PGVQPAGRTLPPAAASLQNLSEAFASVAEHVKPSVVYIKSGRKPEAMAQRGPRGP"
     gene            474..782
                     /locus_tag="VGQ24_12765"
     CDS             474..782
                     /locus_tag="VGQ24_12765"
                     /inference="COORDINATES: protein motif:HMM:NF024297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEV8455764.1"
                     /translation="MRSSLVTIVLLAAVTGVARPQSAADSAAIRSTALDYVEGWYEGS
                     PQRMARAVHPELVKRIVVSDTVTRQSVLQNMGATALVNGTRHGYGKSTPKRKPDSKAD
                     "
     gene            871..2850
                     /locus_tag="VGQ24_12770"
     CDS             871..2850
                     /locus_tag="VGQ24_12770"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HEV8455765.1"
                     /translation="MAPRRRSTLTGLVLLTALSACSGGRSAPVTSPTPGVEGTHIRNP
                     EVPVLEGFERAVTNGTRSRSGTPGPRYWQQWADYRLEAELNPVSKRLTGKGSVTYYNR
                     SPDTLKEVYVQLLHNIFAPNSRHNTDVPWAVEGIELGRVAVQGQELKRAEADAPGYQV
                     DGTVMRIQLPQALPPGGSVVFDFTWKLRIPPDGAPRGGQDGEVFYINYWYPQMAVYDD
                     INGWQIDQYLGNAEFYMGYGNYDVALTVPAGWLVDATGRLQNPAEVLSPQTRARLDSA
                     GRAPGIIHVVTDLDRDPGKATTAGTNGKLTWRFRAEKVRDVSWATSARYLWDATNAVV
                     GDATGDGRPDTTAIYSFYRPEQRRISHWDESARYSRHSIEFFSKYLAPYPYPHMSAVD
                     GPTSCGGMEYPMMTCIGGQWDTLGLYEVTAHEIGHMWFPMIVGSDEKRYAWMDEGLTQ
                     FDQSQAMDDFFKGFDDEARNRKNYLDIAEMGSEVELMHHGDRFPTYASYGAATYYKPA
                     SVLVALRGVLGAETFHKAYAEYIRRWSYKHPSPYDFFHTFEDVSGKDLSWFWRSWFFE
                     TWKLDQAIDTVTPAGDSLEIVIENRGRAQMPVLLAVTRAGGRVDRLTIPAGVWFTGGR
                     RHAIRIAREPMVKSIEIDTEKDFPDLDRSNQVWPR"
     gene            2927..5125
                     /locus_tag="VGQ24_12775"
     CDS             2927..5125
                     /locus_tag="VGQ24_12775"
                     /inference="COORDINATES: protein motif:HMM:NF011071.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional alpha,alpha-trehalose-phosphate
                     synthase (UDP-forming)/trehalose-phosphatase"
                     /protein_id="HEV8455766.1"
                     /translation="MPRVLIVANRLPITVRVSEAGVEVQRSSGGLATGLLRPHEESGG
                     LWIGWSGSSEVLTESQQAELDHQLGGMRLVAVPLSANQITRYYEGFSNGVLWPLFHYL
                     LDQVPLHVRDWEAYVEANDRFADVVAQQYQVGDLIWVHDYQLLLLPGLLRQRLPDARI
                     GFFLHIPFPSEELFRTLPERDRLLRGLLGADLVGFHTPTYLRHFAASLTQILGLTVEI
                     DRVQLTDREVRLGVFPMGIDAQTFIALAEDPAVQAEAQSLRGDGTVKLLVGVDRLDYT
                     KGIPRRLLSYEKMLQTHPDLRGQVRLVQVAVPSRTGVGAYQEFRSLVDGLVGRINGDF
                     ATPSWVPVHYIFRGLSDRELVALYRAADVMLVTPLRDGMNLVAKEFVASRTDGDGVLV
                     LSEFAGASWELPEAIQVNPYDVEGTAESCYRALMMGAEERRTRLEPLRARVQTYDVHR
                     WAATFLEQLEAVTQRQPSSRRVPAGATAARQALQARLREAEDLLALLDYDGTMVPYTA
                     TPELARPDPALVELLGALAARPRSEVHVVSGRPRETLEHWLGMLPIALHAEHGFWSRP
                     VGSSEWTALGELGGSWREPALTILRDITARTPGSLIEVKSAALAWHYRMADREAGARR
                     ANELRLHLTQLLSNQPVEILAGHKVIEIRPYGIHKGRIVPPLPPERLATTTVLAIGDD
                     RTDEDLFEALPPDAVTVRVGPGPTQARFRLDGVPAVRTLLYSLVEAEVPR"
     gene            5128..6480
                     /locus_tag="VGQ24_12780"
     CDS             5128..6480
                     /locus_tag="VGQ24_12780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HEV8455767.1"
                     /translation="MQQPPGLAVLFFTELWERFAYYGMRALLILYLIDTAAGGLGWSQ
                     ERASRLYGWFIGLTYLTPVAGGWLADRFLGTNRSLLVGGAVLTLGYFSLALGTGLSFY
                     AGLALVVVGTGFFKPNVHTMVGQLYRSGDPRRDSGFTLYYMGINLGAFFGPLVCAWLA
                     VRYGWPYGFAAAGTGMTMGVAFYLWARGESLRSVGLSPRARAAAAGPLLDPALTPAER
                     QRIMAIGLITVFVVVFWLAFEQAGSSLNVFAAHRTNRAAGAWLGWLAPNGEIPAAWFQ
                     SINPFFVLLLAPVVAGIWQRLGDRAPSTPAKMALGLILLGLAYMVMVTGAAHSDHGSR
                     VSPWVLVAFYMVYTLGELCFLPVGISFVSQTAPARLASMLMGIWLTANFVANLMGGYL
                     AGMVQRIERGEIFRVLGGQADFFLIFVVLCLTAGCLLGLLVPAIRRLMGATSGVARPT
                     "
     gene            complement(6490..6912)
                     /locus_tag="VGQ24_12785"
     CDS             complement(6490..6912)
                     /locus_tag="VGQ24_12785"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEV8455768.1"
                     /translation="MLKRTLGPLVLATLIATTAAMAQATPVKIKEPISNGRTLSQWIM
                     DLKAPAPQTRNAAAYEIAGMGPAAARAVPALIEALDDPSPVVRFPATVALLEIGPEAK
                     AAVPRLQQMIEEEVNDEIAASARRALKRIDPAAVPPAE"
     gene            7264..8751
                     /locus_tag="VGQ24_12790"
     CDS             7264..8751
                     /locus_tag="VGQ24_12790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family metallopeptidase"
                     /protein_id="HEV8455769.1"
                     /translation="MAGLPRQLLDELAELEAIDSNLPGIMRSLRIVRTSVFILSLAAG
                     PGRAQTGSPAPAATSVEATYRDVADSLIRAATGDSGAYARLGNLVDGFGHRLSGSASL
                     EAAIDWILAQMKSDGLENVRGERVMVPHWVRGEESVELVKPRRARLRMLGLGGSIGTP
                     RRGITAPVLVVTSFDELHERAAEARSKIVLFDVPFTTYQETVKYRVEGAAAAARAGAV
                     ATLIRSVAAYSIRSPHTGVMHYDSTVARIPAAALSVEDAMMLRRFQDRGQPVVVTLRM
                     AARTLPDVPSRNVVAEIVGRERPDEVVVLGGHIDSWDVGQGAMDDGGGSVAAWEAVRL
                     MKQLGLRPRRTVRVVLWTNEENGGKGALAYRDTHADQLKKHVLAMESDNGVFAPQGFR
                     FSGSDAAFARAQQIAGLLKPIGAGKVSREQDSPEADIGPLVELGVPGMGLDVDSTRYF
                     WFHHSEGDMLDKLDPAELARCVAALAVMAYVAADAPDGLARAATR"
     gene            8797..>10294
                     /locus_tag="VGQ24_12795"
     CDS             8797..>10294
                     /locus_tag="VGQ24_12795"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEV8455770.1"
                     /translation="MLLELLLLLHSDPIDPPGVYRGRLGELDVRIPRQEAETAVDGKL
                     DEEVWGAAALLTSFSQFSPTDGIPAADSTQVLVWYSPTAIHFGIRAFEAHGSVHATLA
                     DRDRISADDHIQILLSTFNDGRQASVFAVNPYGVQSDGALVETGSTSGNGFNNAVVKR
                     ETADLSPDFVFESKGRLTEYGYEVEVRIPFKSIRFQPGREQVWGLNVVRLVQHSGRED
                     SWTPAKRASASFLAQSGRLVGLRDLRRGVVLDFTPSLTSRTTGTPGASGWEYAGGGPE
                     LGGTVRWGVTNNLTLNGTANPDFSQVESDAQQFVFDPRNELFFSEKRPFFLEGIEQFS
                     TPNSLIYTRRIIQPVAAAKLTGKAFGTDLALLSAVDDRAGSASGQDHPVYNLLRIQRD
                     VGSQSRIGVVYTDKIDGDNYNRVAGADSRLVFGGVYSAQLQAAGSRTRRNGITETAPL
                     WSARVARNGRTFGARYSITGIAEDFRAQSGFISRPGIAHANLDHSLTLY"
BASE COUNT         1688 a         3349 c         3453 g         1804 t
ORIGIN      
        1 gggccgcggg gccccctctg ggccatagcc tcaggcttcc ggccagactt gatgtagacg
       61 acgctgggct tgacgtgctc cgccaccgag gcaaacgcct cgctgagatt ctgcagcgag
      121 gctgcggccg gcggcagcgt ccggccggcg ggctggactc cggggccata gggcgcctgc
      181 tgttgctgcg cggccgacga gtagggcaaa tggaggaggc ctgccgtcac caggccgagg
      241 gcgaacgcca atccaacgcc ggcagacttg aggcgacgga accatccttg ggacatatct
      301 actccccgca tgggcatgcg tgtgcgttcg gagcggaatt gctccgtagg gctattgtga
      361 tgctcatgcg ggggattccg tcgcgccgtc tgaaacgacc tcttgagcca gccgtacgta
      421 gttcaggagt gccctggata cctcatgcca acacctcagc ctccggaata accatgagat
      481 cgagcctcgt cacgattgtt ctgctcgccg ccgtgaccgg cgtagcccgg ccgcagtcgg
      541 ccgccgattc cgcagcaatc cgctctaccg cgctcgacta tgtggaggga tggtacgaag
      601 gaagcccgca acggatggcc agagcggttc atcccgagct ggtgaagcgc atcgtggtga
      661 gtgacaccgt taccaggcaa agcgtcctac agaacatggg cgcgaccgcg ctggtcaacg
      721 gcacccgtca cggctacggc aagagcaccc cgaagcggaa gcctgactcc aaagccgact
      781 agggttgcct cgcgccccgg gtcagaacat catccgcgcc gcacgaacaa ccgtccagga
      841 cccccagagc cggagaagct gatggattgc atggcccctc gtcgtcggag tacgctcacc
      901 ggactcgtct tgctgacggc cctatcggcc tgtagcggcg gccgaagcgc gccggtcacc
      961 tcgcccacac cgggggtgga ggggacccac atccgtaacc cggaggttcc cgttcttgaa
     1021 gggttcgagc gagccgtgac caacggcact cgcagccgca gcggaacgcc cggtcctcgc
     1081 tattggcagc aatgggcgga ttaccgcctg gaagccgagc tcaatccagt ctccaagcgg
     1141 ctcaccggca aggggtcggt gacctactac aaccgctcgc ccgatacgct gaaggaggtc
     1201 tacgtccagc tgctgcataa catcttcgcg ccgaacagcc ggcataacac cgacgttccc
     1261 tgggcggtcg agggcatcga gctgggccgg gtggcggtgc aggggcagga gctcaagcgg
     1321 gccgaggcag atgcgccagg ctaccaggtg gacgggaccg tcatgcggat tcagctgcca
     1381 caggcattgc cgcccggcgg atcggtcgtg ttcgacttta cctggaagct caggataccc
     1441 cccgacgggg cgccccgcgg cggccaggac ggcgaggtct tctacatcaa ttactggtat
     1501 ccgcagatgg cggtctacga cgacatcaac ggatggcaga tcgaccagta tctcggcaat
     1561 gccgagttct acatgggcta cggcaactat gatgtggcgc tcaccgtgcc ggcgggttgg
     1621 ctggtagacg ccaccggccg gctgcagaac ccggcggagg tcctctcccc ccagactcgc
     1681 gcgcggctgg attcggccgg ccgggcgccg ggaataatcc acgtggtgac cgacctcgac
     1741 cgcgatcctg ggaaggccac cacggccggc accaacggaa aactcacctg gcgatttcgg
     1801 gccgagaagg ttcgcgacgt gtcctgggcc acgtcggcca ggtatctctg ggatgccacc
     1861 aacgcggtgg tcggcgacgc gaccggcgac gggcggccgg acacgacggc catctattcg
     1921 ttctaccgtc ccgagcaacg tcggatcagc cactgggatg agagcgcccg atatagccgc
     1981 cactcgatcg agttcttctc caagtatctg gcgccctacc cctaccccca tatgagcgcg
     2041 gtggacggcc ccacctcctg cggcggcatg gagtacccga tgatgacctg catcggcggc
     2101 cagtgggaca cgctcggtct gtatgaggtc acggcccatg agattggaca catgtggttt
     2161 ccgatgatcg tgggctcgga cgagaagcgc tacgcctgga tggacgaggg actcacccag
     2221 ttcgatcaat cccaggcgat ggacgacttt ttcaagggct tcgacgacga ggcgcggaac
     2281 cggaagaact acctcgacat cgccgagatg gggagcgagg tggagctgat gcatcacggt
     2341 gaccgctttc ccacctacgc ctcgtatggt gcggcgacct attacaagcc ggccagcgtg
     2401 ctcgtggcgc tccggggtgt gctcggggcc gagacgtttc acaaggccta cgccgaatac
     2461 atccggcggt ggagctacaa gcacccctca ccctatgact tcttccacac cttcgaagac
     2521 gtctcgggca aggacctgtc ctggttctgg cggagctggt tcttcgagac ctggaagctc
     2581 gatcaggcga tcgataccgt cactccagcg ggcgattcac tcgagatcgt catcgagaat
     2641 cgggggcggg cacagatgcc ggtcctgctc gcggtgaccc gggccggcgg ccgggtggac
     2701 cggctgacca ttccggcggg cgtctggttc acaggcggcc ggcggcacgc tatccggatc
     2761 gcccgggagc cgatggtcaa gagcatcgag atcgataccg agaaggactt cccggatctc
     2821 gaccggagca atcaggtgtg gccccggtag cggggtgtcc ggagcttggg gtgtacctgg
     2881 gtgtctagac tctttgcttg atcccacatg caggtacctt agacgcatgc cccgtgtgct
     2941 aatcgtcgcc aaccgactcc cgatcaccgt tcgagtcagc gaagccggtg tcgaagttca
     3001 gaggagctcc ggtggcctgg cgacgggact cctccggccc cacgaggagt ccggcggcct
     3061 ctggatcggg tggtccggct cctccgaggt gctcaccgag agccagcagg ccgagctgga
     3121 ccaccaactg ggcggcatgc ggctggtggc cgttccgctg agcgccaacc agatcacccg
     3181 ctattacgaa ggcttctcca acggggtcct ctggcccctc ttccattatt tgctggacca
     3241 ggttccgctc cacgtgcgcg attgggaggc ttacgtcgag gcgaacgatc ggttcgccga
     3301 tgtcgtggct cagcagtatc aagtcggcga cctgatctgg gtgcacgact atcagctcct
     3361 cctcttgccc gggttgctgc ggcagcggct gccggacgcc cgcatcggtt tcttccttca
     3421 catcccgttt ccctccgaag agctgtttcg cacgcttccc gaacgcgatc gtctgctccg
     3481 tggactcctc ggcgccgacc tggtcggctt tcatacgccg acctacctga ggcacttcgc
     3541 cgcctccctc acccagatcc tcgggctcac ggtggagatc gaccgggtcc agctgacgga
     3601 tcgcgaagtc cggctcggcg tctttccgat ggggatcgac gcccaaacat tcatcgcgct
     3661 ggcggaagac ccggccgtac aggccgaggc ccagtcgctg cgcggtgacg gaacggtgaa
     3721 gcttctggtg ggagtggatc gtctggacta taccaaggga atcccccggc ggctcctctc
     3781 ctatgagaag atgctgcaga cccatccgga cctgcgggga caggttcgcc tggtgcaggt
     3841 ggcggtgccg tcgcggaccg gggtgggggc gtatcaggaa ttccgatcgc tggttgacgg
     3901 cctggtgggc cgcatcaacg gcgacttcgc cacgccgagc tgggtaccgg tgcactacat
     3961 ctttcgcggg ctgtccgatc gggagctggt agcgctctac cgtgccgcag acgtcatgct
     4021 ggtcacccca ttgcgcgacg gtatgaatct ggtggccaag gagttcgtcg cctcccggac
     4081 ggatggcgat ggagtcctgg tgctgagtga gttcgccggg gcgtcctggg agctgccgga
     4141 ggccatccaa gtgaatccct atgatgtgga gggaaccgcc gagagctgct atcgcgcgct
     4201 catgatggga gccgaggaac ggcggaccag actggagcca ttgcgcgcgc gggtgcagac
     4261 ctacgatgtc catcgttggg ctgcaacgtt cctggagcag ctggaggcgg ttacccagcg
     4321 gcagccgtcg tcgcgccgcg ttccagccgg cgccaccgcc gcacgccagg ctctgcaggc
     4381 acggcttcgc gaggccgagg atctgctggc gttgctcgac tacgacggga ccatggttcc
     4441 ctacaccgcg acacccgagc tggcccggcc cgatcctgcg ctagtggagc tgcttggtgc
     4501 cctggccgcg cgtccgcgaa gcgaagttca cgtggtgagc ggacgcccgc gcgagaccct
     4561 ggaacactgg ctcggcatgc tgccgattgc gctgcacgcg gagcacggat tctggtcccg
     4621 gccggtcggc agctccgagt ggaccgcgct tggggagctc ggcggcagct ggcgtgagcc
     4681 ggcactgacc attctgcggg atattaccgc tcgaacgccg ggctctttga tcgaggtgaa
     4741 gtcggcagcc ctggcgtggc attatcggat ggccgaccgg gaagcggggg cccggcgagc
     4801 caacgagctg cggctgcatc tgacccaact gctcagcaat caaccggtcg agatcctggc
     4861 gggacacaag gtcatcgaga tccggcccta cggcattcac aagggacgga tcgtcccacc
     4921 gctcccgccc gagcggctgg ccaccaccac cgtactggcc atcggcgatg atcgcaccga
     4981 tgaggacctt ttcgaggccc tgcctcccga tgcggtcacc gtccgggtag gacccggacc
     5041 cactcaagca cgcttccgtc tggatggagt acctgccgtg cgcaccctgc tctactccct
     5101 ggtcgaggcc gaggttccca gataaggctg caacaaccgc cagggctcgc ggtgctcttc
     5161 ttcaccgagc tctgggagcg ctttgcctac tacgggatgc gggctctcct catcctgtac
     5221 ctcatcgaca cggccgccgg cgggctggga tggagccagg agagggccag ccggctctac
     5281 ggctggttca tcggtctcac ctacctgacc ccggtggcag gaggatggct cgcggaccgg
     5341 ttcctcggta ccaaccgatc gctgctggtc ggcggtgcgg tcctcactct cggttacttc
     5401 tccctcgcac tcggaaccgg tctgtcgttc tatgccggac tggccctcgt cgtggtgggc
     5461 accgggttct tcaagccgaa cgtgcacacg atggtgggcc agctctatcg gtcgggtgac
     5521 ccgcgccggg actcggggtt caccctctac tacatgggca tcaacctggg cgcgttcttc
     5581 ggcccgctgg tatgcgcatg gcttgcggtg cggtacggct ggccgtacgg attcgccgcg
     5641 gctggcaccg gcatgacgat gggcgtagcg ttctacctct gggccagagg cgaatcgctg
     5701 cggagtgtcg ggctctcgcc gcgggcgcgc gcggcggccg caggtcccct cctcgatccc
     5761 gcgctgacgc cggccgaacg gcagcgcatc atggctatcg ggctcatcac tgttttcgtg
     5821 gtggtcttct ggctggcgtt cgaacaggca ggctcgtcgc tgaatgtgtt cgcggcgcac
     5881 cgtaccaacc gagcagccgg ggcgtggctg gggtggctgg cccccaacgg cgagatcccc
     5941 gccgcctggt tccaatcgat caatcccttc ttcgttctgc tgctggcgcc ggtcgttgca
     6001 ggcatctggc agcgcttggg agatcgggcc cccagcactc ccgccaagat ggcactgggg
     6061 ctgatcctgc tcggcctggc ctacatggtc atggtgacgg gggcggcgca cagcgaccat
     6121 ggctcacggg tgagtccctg ggtgctggtg gcgttctata tggtctacac gctgggagag
     6181 ctctgtttcc tgccggtggg catctcgttt gtgagccaga ccgcgcccgc caggctcgca
     6241 tccatgctga tgggcatctg gctgaccgcc aattttgtgg ccaacctgat gggcggctac
     6301 ctggcaggaa tggtacagcg gatcgagcgc ggcgaaatct tccgggtgct cggaggacag
     6361 gccgatttct tcctgatttt cgtggtcttg tgtcttaccg cggggtgtct gctaggcctg
     6421 ctcgtcccgg cgatcagacg ccttatgggg gcgacatccg gcgtggcacg gccgacctag
     6481 gtggtgcagt tactcggcgg gtggcacggc agccggatcg atacgcttca gggcccggcg
     6541 ggccgacgcg gcgatctcgt cgttgacctc ctcttcgatc atctgctgca ggcggggcac
     6601 cgccgccttg gcctcgggtc cgatctcaag gagcgcgacg gtggccggga agcggaccac
     6661 ggggctcgga tcgtccagcg cttcgatcag ggcgggcacc gcccgggccg ctgccggccc
     6721 catccccgcg atctcatagg cggcggcatt ccgagtctgc ggagccggag ccttcaggtc
     6781 catgatccac tgactcaagg tccgcccatt cgaaatcggc tccttgatct tcaccggagt
     6841 cgcctgcgcc atggcggcgg tggtcgctat caacgtagcc agcacgagcg gccccagagt
     6901 acgcttcagc atgagtttct cccggtacgt tagctcatcc gcattcgcgg cttactggaa
     6961 tatagacgct ccgggattgc cgaatgcgca cctcagcgga ggccccaccc tgtcagcgga
     7021 actgggccga gcccctccgg cttcgagcgc cgacttcccc ccgccacacc ccttgcgctc
     7081 agccttcggg gttcggccga gttccgctgc ccgccccacc ccgtcgcgtg cggggcggag
     7141 cagacggcgc gggtatgggt tcgaaggcag gctcccaggg gaagggggag cggttgtcat
     7201 ggagcctgcc ggagagccca tgcccgggtc ggctgcgagg ggcggggcgg caacgagtgg
     7261 cggatggccg gcctcccgag acaacttctg gacgagctcg ccgagctcga ggctatcgac
     7321 tccaacctgc ctggcatcat gagatctcta cggatcgtac gcacgagtgt tttcatcctg
     7381 tcgctggctg cgggaccggg ccgggcccag accggctcgc ccgccccggc ggccacgtcg
     7441 gtcgaggcga cgtaccgcga cgtcgccgac agcctcatac gcgcggcgac cggggacagc
     7501 ggggcgtacg ctcgcctggg caacctggtg gacggcttcg gccaccgcct gagcggctcc
     7561 gccagtctcg aggcggcaat cgactggatc ttggcgcaga tgaagagcga cggcctggaa
     7621 aacgttcggg gagagcgggt gatggtcccg cactgggtgc gaggcgagga atcggtcgag
     7681 ctggtcaagc cgaggcgcgc ccggttgcgc atgctcgggc tgggaggcag catcggcaca
     7741 ccgaggcgcg ggataacggc gccggtgctc gtggtgacca gcttcgacga gctccacgaa
     7801 cgggcggcag aggcgcggag caagatcgtg ctgttcgacg tgccgttcac cacataccag
     7861 gagaccgtga aatatcgggt ggaaggtgcg gcggccgcgg cccgggccgg cgcggtggcc
     7921 accctgatcc gctcggtcgc cgcctactcc atccggagcc cgcacacggg agtgatgcac
     7981 tacgactcga cggttgcccg aattccggcc gcggcactca gtgtggagga cgccatgatg
     8041 ctgcggcgat tccaggatcg tggccagccc gtggtcgtga cgcttcgaat ggccgcccgt
     8101 accctgccgg atgtcccatc gcggaatgtg gtggccgaga tcgtcgggcg cgaacgtccg
     8161 gatgaggtgg tggtgctcgg tggccacatc gattcgtggg atgtcgggca gggggcgatg
     8221 gacgatggcg gcggctcggt cgcggcctgg gaggcagtgc ggctcatgaa gcagctcggt
     8281 ctccggccgc gtcgaacggt gcgggtggtg ctctggacca acgaggagaa cggcgggaaa
     8341 ggggccctgg cctatcgtga cacgcatgcc gaccagctaa agaagcacgt cctggccatg
     8401 gaatccgata acggcgtctt tgctcctcag ggcttccgct tcagcgggtc ggatgcggcc
     8461 tttgcgaggg cgcaacagat tgccggatta ctgaagccga ttggagcggg gaaggtgagc
     8521 cgggagcagg attcccccga ggccgacatt ggcccgctgg tcgagctcgg agtgcccggt
     8581 atgggtctgg atgtggacag cacccgctac ttctggttcc accacagcga gggtgatatg
     8641 ctggacaagc tcgatccggc cgagctggcc cggtgtgtgg cggcgctcgc ggtgatggcc
     8701 tatgtcgcgg cggatgcgcc ggacgggctt gcccgcgctg ccacccgctg aggtcgcgaa
     8761 acccgaggtc tgccgtcgcc gtaccgctag aaggccatgc tgctcgagct cctgctgctg
     8821 ctccactccg atccgatcga cccacccggc gtgtatcgcg gccggttggg cgagctggat
     8881 gtgcgtattc cgcggcagga agccgagacc gcagtcgatg gcaagctcga tgaggaggtc
     8941 tggggtgcgg ccgcattgct caccagcttc tcccagttct ccccgaccga tggtatccct
     9001 gcagccgact cgacccaggt gctggtgtgg tactccccta ccgccatcca cttcggcatt
     9061 cgggcgttcg aggctcacgg gtcggtgcat gccaccctcg ctgatcgtga ccgcatctcc
     9121 gccgacgacc acatccagat tctcctcagc acattcaatg acggacgcca ggccagcgtg
     9181 ttcgcggtca acccgtacgg agtgcagtcc gacggggcgt tggtcgaaac cggctccacc
     9241 agcggcaacg gcttcaacaa tgcggtggtc aagcgcgaga cggcggatct gagccccgac
     9301 ttcgtgttcg aatcgaaggg ccggctcacc gagtacggct atgaagtcga ggtgcggatt
     9361 ccgttcaaga gcatccgctt tcagcctggg cgggagcagg tctggggact caacgtggtc
     9421 cgcctggttc agcactccgg ccgagaggat tcctggacgc cggccaagcg cgccagcgcc
     9481 tcgttcctgg cccagtcggg ccggctggtc gggctcaggg acctgcgtcg cggggtggta
     9541 ctcgacttca ctccttcgct cacctcgaga accaccggca ccccaggtgc gagcggctgg
     9601 gagtatgccg gcggcggtcc ggagctcggc ggcaccgtgc gctggggcgt caccaacaac
     9661 ctgacactca acggcaccgc caaccccgat ttctcccagg tcgagtccga tgcccagcag
     9721 ttcgtcttcg acccgcggaa cgagctcttc ttctcggaga agcggccctt cttcctcgag
     9781 ggaatcgagc agttcagcac cccgaattca ctgatctaca ccaggcggat cattcaaccg
     9841 gtggcagcgg ccaagctcac cggcaaggcc ttcggcaccg acctggcact gctcagcgcg
     9901 gtggatgacc gggccggctc cgccagcggg caggatcatc ccgtgtacaa cctgctccgg
     9961 attcagcgtg acgtgggctc ccagtcccgc atcggagtgg tctataccga caagatcgac
    10021 ggggacaact acaatcgggt ggccggcgcc gattcgcgtc tcgtgttcgg cggggtgtac
    10081 agcgctcagc tccaagccgc gggaagtagg acccggcgaa acggcatcac cgagaccgcg
    10141 ccgctctggt ccgcgcgggt ggcccggaac ggccgcacgt tcggagcgcg gtactccatc
    10201 accggcatcg cggaggattt ccgggcccag agcggcttca tatcgcggcc cggcattgcc
    10261 cacgccaatc tcgaccacag cctcacgctg tacg
//
LOCUS       DASYRV010000477         2373 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_725979, whole genome shotgun sequence.
ACCESSION   DASYRV010000477 DASYRV010000000
VERSION     DASYRV010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2373
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_725979"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..832)
                     /locus_tag="VGQ24_12800"
     CDS             complement(<1..832)
                     /locus_tag="VGQ24_12800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEV8455771.1"
                     /translation="MPNGSVITVDRVSKRFSGHTAVDQLSMEVPRGGIFGLLGPNGAG
                     KSTTIRMIMNIITPDEGRISVLGAESASRDLSGRIGFLPEERGLYKKMKVLDQLTFLG
                     EAKGIGRPAARKKAGEWLERLGLVDWAIKKVEDLSKGMQQKVQFIGALLHEPELLILD
                     EPFSGLDPVNSQVMKDVVVDLAREGRTVLFSTHIMEQAERMCDRIVIIARGRTVVDGT
                     LAVVKREFGGRHVALNFTRNRERAAKVLADRSLIQKVDDYGASAEVELAPSGDAERLL
                     R"
     gene            complement(909..1202)
                     /locus_tag="VGQ24_12805"
     CDS             complement(909..1202)
                     /locus_tag="VGQ24_12805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455772.1"
                     /translation="MSGRVFHPGHEALHGVTVVVEGASGRLWVGRYHETNDRGVMMHD
                     VAIHDPATSSLSRGAWVERLRKFGIQIDEPVVILPLQEAGRITRLAEWKEPTP"
     gene            complement(1205..1639)
                     /locus_tag="VGQ24_12810"
     CDS             complement(1205..1639)
                     /locus_tag="VGQ24_12810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrxA/BrxB family bacilliredoxin"
                     /protein_id="HEV8455773.1"
                     /translation="MAYNEMMVRPMREELTRLGVQELRSVADVDAALGPGEGTALVFV
                     NSVCGCAAGAARPGLSLALRHAVKPQQLYTVFAGQDIEAAARARSYFAEYQPSSPSVA
                     LLRDGEVVHFVHRHMIEGRGPEAIAADLVAAFDKYCGAEAPR"
     gene            complement(1621..2091)
                     /locus_tag="VGQ24_12815"
     CDS             complement(1621..2091)
                     /locus_tag="VGQ24_12815"
                     /inference="COORDINATES: protein motif:HMM:TIGR01994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system NifU family Fe-S cluster assembly
                     protein"
                     /protein_id="HEV8455774.1"
                     /translation="MTSELDELYQSVILDHNRAPRNFRKLEDATAHAEGRNPLCGDAF
                     EIWLKVAGDRIVEVSFLGQGCAISKASASMMTQVITGKTVAEVKHLFEQFHALVTTGS
                     PGSAEGKASLPAKLEVFKGVRAFPIRVKCATLGWHAMKAALEGSTKEELWPTTK"
     gene            complement(2088..>2373)
                     /locus_tag="VGQ24_12820"
     CDS             complement(2088..>2373)
                     /locus_tag="VGQ24_12820"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEV8455775.1"
                     /translation="LRKLECVPGLRILGEGADRVSVLSLVLEGIHPHDAGTVLDTAGI
                     AVRAGHHCAQPLMRRFGVPATLRASFGAYNTHEEIDILVEGLNQARRVLG"
BASE COUNT          380 a          818 c          739 g          436 t
ORIGIN      
        1 tgcggagcag gcgctccgca tctccgctcg gcgccagctc gacctcagcg ctggcgccgt
       61 aatcgtccac cttctggatc aggctccgat cggccagaac tttcgcggct cgctcccggt
      121 tgcgcgtaaa gttgagcgcg acgtggcggc ccccgaactc ccgcttcacg acggccaggg
      181 taccgtccac gaccgtgcgc ccccgcgcga tgatcacgat gcgatcgcac atcctctcgg
      241 cctgctccat gatgtgggtc gagaagagga cggtgcgccc ttcccgggcc aggtccacca
      301 cgacgtcctt catcacctga ctgttgacgg gatcgagtcc gctgaagggt tcgtccagga
      361 tcaggagctc gggctcgtgg agcagcgcgc cgatgaactg aaccttctgc tgcatcccct
      421 tggagaggtc ttcgaccttc ttgatggccc agtccaccag gcccaggcgc tcgagccatt
      481 cgccggcctt ctttcgtgca gccggccggc cgatcccctt ggcctcgccc aggaacgtga
      541 gctggtcgag caccttcatt tttttgtaga gcccgcgctc ctcgggaagg aatccgatcc
      601 gcccggacag gtcgcggctg gcggattccg ctcccagcac cgagatccgt ccctcatcgg
      661 gcgtaatgat gttcatgatc atccggatcg tggtgctctt gccggcgccg ttgggaccca
      721 gcaggccgaa gatccctccc ctggggacct ccatggagag ctgatcgacg gcggtatgtc
      781 cggagaatcg tttggagacg cggtctactg tgatcacgct gccgttcggc ataccgtctg
      841 gctccggcga gggtcggaag cgctagaatc ggcccccgcc tacgaggcgg ggctcggccg
      901 agtttccact agggggtagg ctctttccac tccgcgagac gggtgatccg accggcctcc
      961 tgcagtggca ggatcaccac cggctcgtcg atctggattc cgaactttcg cagccgctcc
     1021 acccaggcgc cacgagacag ggagctggtg gccgggtcat ggatggcgac gtcatgcatc
     1081 atgaccccac ggtcgttggt ttcgtggtag cggccgaccc agagccgtcc cgaagcaccc
     1141 tccaccacga cggtgacacc gtgaagcgct tcgtggccgg gatgaaacac gcgacccgac
     1201 acgtctaacg cggcgcctcc gcgccgcagt acttgtcgaa tgccgcgacc aggtcggcgg
     1261 caatggcttc cggcccccgt ccttcgatca tgtggcggtg cacgaaatgc accacctcgc
     1321 cgtcacgcag cagcgccacc gagggcgagc tcggttggta ctcggcgaaa tagcttcgcg
     1381 cccgggctgc cgcttcaata tcctgaccgg caaagacggt gtacagttgt tgcggcttga
     1441 ccgcgtgacg cagcgccagg ctcaagccgg gccgggcggc tccggccgca caaccgcaga
     1501 ccgagttcac gaacaccagc gccgtgcctt cgcccggacc gagggcggcg tccacgtccg
     1561 ccacgctgcg cagctcctgc acacccaatc gcgtgagctc ttcgcgcatg ggacgcacca
     1621 tcatttcgtt gtaggccata gctcctcttt cgtggatcct tccagcgccg ccttcatggc
     1681 gtgccagccc agtgtcgcgc acttcaccct gatcgggaac gcccgaacac ccttgaatac
     1741 ctcgagcttg gccggcaggg aggctttgcc ttccgcgctg ccggggcttc cggtcgtcac
     1801 cagcgcatgg aactgctcga agaggtgctt gacctccgcg accgtcttcc cggtgatcac
     1861 ctgggtcatc atcgacgcgc tggcctttga gatggcacag ccctggccga gaaagctgac
     1921 ctcgacgatc cggtctcccg ccaccttgag ccagatctcg aacgcgtcac cgcagagcgg
     1981 gttgcgccct tccgcgtgcg ctgtcgcgtc ttccagcttg cggaaattcc ggggagcccg
     2041 gttgtggtcg aggatgacgc tctgatacag ctcgtccagc tcgctggtca tccgagcacg
     2101 cggcgggcct ggttgagacc ttctaccagg atgtcgattt cttcgtgggt gttgtacgcg
     2161 ccgaacgagg cccgcagtgt ggcggggacc ccgaagcgcc gcatcagcgg ctgggcgcaa
     2221 tggtgtccgg cgcgcactgc gattcccgcg gtgtcgagga cggtgcccgc gtcatgggga
     2281 tggatgccct ccaggaccag ggacagcaca ctgacccggt ccgctccctc gccaagaatc
     2341 cggagtccgg gcacgcattc gagcttccga agc
//
LOCUS       DASYRV010000478         1531 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3719341, whole genome shotgun sequence.
ACCESSION   DASYRV010000478 DASYRV010000000
VERSION     DASYRV010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3719341"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..592)
                     /locus_tag="VGQ24_12825"
     CDS             complement(<1..592)
                     /locus_tag="VGQ24_12825"
                     /inference="COORDINATES: protein motif:HMM:NF015666.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEV8455776.1"
                     /translation="MSIAQDLITKAERRQIQFGIVGLGYVGLPLAVELAQAGYRVLGF
                     DLNPEVVEGLNAGRSHVKDVTDAQLQQQCERFSATTDMARLAEPDAISICVPTPLSKF
                     KDPDVSFIVAATEAVKRRLRRGQAIILESTTYPGTTREIMLPALESTGLTVGQDFFLA
                     FSPERVDPGNSRYGTRNTPKVVGGITADCRRVAVALY"
     gene            complement(603..>1531)
                     /locus_tag="VGQ24_12830"
     CDS             complement(603..>1531)
                     /locus_tag="VGQ24_12830"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HEV8455777.1"
                     /translation="LLLPLKALDLRPGDEVITPAFTFFATAGAIYNAGGTPVFADIDP
                     VTFNVSPAAVEAAITPKTRGIVVVHLFGQMAAMEAITAIAGQHALPVIEDAAQSIGAR
                     RKIEGTWRVSGELGMVGTLSFFPTKNLGAWGDAGLIVTQDNALAERLRRLRLHGGSRQ
                     YFHEEVGTNSRLDSMQAAVLLAKLPHLTRWNEARQRNAARYNGAFSGHPAICPPRTDP
                     ANDHIFHQYTIQVPQRDELHAHLKAKGVGHAIYYPLALHLQPCFAHLGYRRGSLPATE
                     AAMDSVISLPIYPELTREQQDTVIETVTSFYA"
BASE COUNT          270 a          467 c          522 g          272 t
ORIGIN      
        1 ggtacagcgc caccgccact cgccggcaat cagcggtgat cccgccgacc accttgggcg
       61 tgtttcgcgt gccgtagcgg gagttccccg ggtctacccg ctctggactg aaggcgagga
      121 agaaatcctg cccgaccgtg aggccggtgc tttcgagtgc cgggagcatg atctcgcggg
      181 tagtgccggg gtaggtggtg ctctcgagga tgatggcctg gcctcggcgg agacgcctct
      241 tcacggcctc ggtggcagcc acgataaagc tgacgtcggg atccttgaac ttcgagagcg
      301 gagtcggaac acagatcgag atcgcatccg gctccgccag ccgcgccatg tcggtcgtgg
      361 cgctgaagcg ctcgcactgc tgctggagct gcgcatcagt gacatccttg acgtgcgagc
      421 gaccggcgtt gagcccctca accacctcgg ggttgagatc gaagccgagc acgcgatatc
      481 cggcctgagc cagctcgacc gcaagcggca gtccgacgta ccccagtccg acgatgccga
      541 actgaatctg gcggcgctct gccttggtga tcaggtcctg cgcgatactc atcccggtcg
      601 gctcacgcgt agaatgatgt gacggtctcg atgaccgtgt cctgctgctc ccgggtcaac
      661 tcgggataga tcggcaggga gatgaccgag tccatcgctg cctcggtcgc cggaagactc
      721 ccacggcggt aacccaggtg cgcaaagcag ggctggaggt gaagggccag cggatagtaa
      781 atcgcgtggc cgaccccctt tgccttgaga tgagcgtgga gctcatcgcg ttgcggcacc
      841 tggatggtgt actgatgaaa gatgtggtcg ttggccgggt ccgtgcgcgg tggacagatc
      901 gccgggtgtc cgctgaacgc gccgttgtaa cgggccgcat tccgctggcg ggcctcgttc
      961 cagcgggtca agtggggcag cttggcaaga agcacggccg cctgcatgct gtcgagccgg
     1021 ctgttggtcc cgacctcctc gtgaaaatac tgccgggatc caccgtgcag ccggaggcgg
     1081 cgcaaccgtt cggccagggc gttgtcctgg gtcacgatca gcccggcatc gccccaggca
     1141 cccagattct tggtcgggaa gaaagacagg gtccccacca tgcccagttc gcccgacact
     1201 cgccaggtgc cttcaatctt ccgccgggcc ccaatggact gggcggcgtc ttcgatgacc
     1261 ggaagggcat gttgtccggc gatagcagtg attgcttcca tggcagccat ctgtccgaag
     1321 agatggacca ccacgatgcc cctggtcttc ggggtgatgg cggcctcgac ggcggccgga
     1381 gagacgttga acgtgacggg atcgatgtcc gcgaagaccg gcgtgccgcc cgcattgtag
     1441 atggctccgg cagtcgcaaa aaaggtaaat gccggggtga tgacctcgtc acccggccgg
     1501 aggtcgaggg ccttgagggg aagcagtaac g
//
LOCUS       DASYRV010000479         6810 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1971499, whole genome shotgun sequence.
ACCESSION   DASYRV010000479 DASYRV010000000
VERSION     DASYRV010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6810
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1971499"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1759)
                     /locus_tag="VGQ24_12835"
     CDS             complement(<1..1759)
                     /locus_tag="VGQ24_12835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455778.1"
                     /translation="MGRLLFVLSILSVFSVSLHAQFFAFGQNKIQYRKLAWRIIRGPH
                     VDLYYYPAEAELAPAALAYAEASYDTLAVQFGHDVAARIPLIVYASHTDFEQTNVLPF
                     TPPEGLLGATDFLKRRVALPFRGNFAEFRHTLRHEMVHVFQIDLQSESYYQAPRSGRF
                     SFPLWWSEGLAELWSGGEDARDYMVLRDITFTGRLPSLRQLTYVTGGIVYPLGGRIHR
                     WLADTYGDWRVAYMYKELNRHDTFEDAIYATYGRTLDELSEEFQLAMRRDFYPSVDSL
                     APLAVLGREITRLAIKPAYLPDTTGDRSGEVIYLSPATGYVTIYRKRVDGGRSRTIVT
                     AGRSADLESFHPFDSRMDASRPGYLLFAARYGDRDALVVWDLKRARTAGRYQFDRLVS
                     ILSPMWMADGRSIVFSGLSESGVSNLYRVRLPEGTLEPLTRDRFQDLDPSPSPDGRRL
                     VFASDRTSWGLDGAVNVFMLDLSSGSVTQLTRGDWVDEAPSWGPDGRIYFTSNRDGVL
                     NVFSMDTLGQGRRETSAWSGAFDAVALPDSGGLLVGGFHDLSWNLYRYPLDSAAHEDR
                     FTLDPGPPPGQWAWTTSTDT"
     gene            complement(1849..3885)
                     /locus_tag="VGQ24_12840"
     CDS             complement(1849..3885)
                     /locus_tag="VGQ24_12840"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEV8455779.1"
                     /translation="MTYLVPRLILCLAGALLPGSIAWGQEEAVVEQLAPVLAAEDARQ
                     WQPELFQRALVAPDSVVRRVAAMAAGRIGDLRATPLLLRLLEQPDSTVSVAAAFALGL
                     LRDSAAVQPLIERLTGLPPLDTATADEAVSALAKIGGRRSAEFFASVLQGTVALSQTD
                     PAPATSQMLLETWRLGPAARADALVPFADDTLQSIRWRTIYSLGRLRSGVAANQLMGA
                     LRAPDAATRATATRALTRDYAVGAKLAPTTVSGLLVRSLDDDDPGVRISALRSLATYH
                     DSALSATVAPRVDDPDGNVRVQAASALGELSGSTATVALRRVLKGKGSFALRREALLA
                     LARTDPGSLWTASAPWRSSADWRDRAAAAEGWAAAGAKGAPWFIADADGRVIAAGLQA
                     WASAVPGPDAALVATSRRLLVHSDAAVRSVAADAVARAADPADLSALAAMYARSSRDS
                     FPDAALSALGGIAAIAGSTTQARERVDREFLSTLPRPSNYLVRHWAESNWPAASERWG
                     PAYPIATGRTLQDYRDVVRRFVVAPDSVARPHVLIDIDQRGVLEVELYGPEAPLTVAN
                     FLRLVDRRFFDGNRWHRVVPNFVVQDGDPRGDGFGGPGGSIRDEINRSRYGIKPMLGM
                     ALSGPDTGASQWFINLAPQPHLDGTYTVFGRAVGNVGALARITQGDVIRTIRRK"
     gene            complement(3882..4316)
                     /locus_tag="VGQ24_12845"
     CDS             complement(3882..4316)
                     /locus_tag="VGQ24_12845"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEV8455780.1"
                     /translation="MATEPPPISETLVRVNYSETDQMGVVYHARYLVWLDVARTEYLR
                     QCGMSYRELEASGLRLAVSEVSVRFRQPARYDDPVRIRCWIREAASRRVDFGYAVEHA
                     EEDRLLATASTRLIALDTRMALTRLPERVRAALHPIPDPIRL"
     gene            4433..5170
                     /locus_tag="VGQ24_12850"
     CDS             4433..5170
                     /locus_tag="VGQ24_12850"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEV8455781.1"
                     /translation="MLGHTLVVVSDAHLGVAPPAVEEALLEFLDVVPQLGDCLLVNGD
                     LFDFWFSYSRVIPRRGFHVAAALARLRRRMPIVMVGGNHDRWDTHFWERDLGLRFEPL
                     RATFKIGRRTVAAIHGDGVADPRWQARLIHGIIQHRVTAAIYRVLHPDLGLRLVDSLS
                     PLLGDHTIDERKLASAAARQTDWARQLLAKEDSVGLLIMGHTHRAVLTEPLAGRQYLN
                     PGAWFDGFRYAVATESGAELCCFQPKA"
     gene            complement(5191..5991)
                     /gene="murI"
                     /locus_tag="VGQ24_12855"
     CDS             complement(5191..5991)
                     /gene="murI"
                     /locus_tag="VGQ24_12855"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEV8455782.1"
                     /translation="MNRAPVGIFDSGIGGLTVARAIYERLPRESTIYFGDTARVPYGP
                     KSPDTVKRYSLEILHWLLAQEVKAVVVACNTSTAHALRALQEASPVPVLGVIKPGARA
                     AIASGEGGPIGVIGTAGTIASDAYNRAIQALAPGLPVIQRACPLFVPLVEEGWFDHPA
                     TELVAADYLRGLREACVRSLVLGCTHYPLLKPLLQRVMGPEVRLIDSGQATATALETI
                     LADKALEAPPESKPHHRFVVSDDEARFRQVGSRFIGERLGKAEVVPLG"
     gene            complement(5988..6473)
                     /locus_tag="VGQ24_12860"
     CDS             complement(5988..6473)
                     /locus_tag="VGQ24_12860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455783.1"
                     /translation="MSIQLRTTVILFLSAFAPTLAAQDSAAVRRPAAAVQPDTLSRRY
                     ISPLNALWRSLLIPGWGQARLNRKLAGGILIGWEGVALGMTLKTRRELRYLRRVGAVR
                     ADDKRQEHEDWIVLLAFNHLFAGLEAFVSAHLADFPGDLRFQAVPGGVGASVSLPIRL
                     R"
     gene            complement(6484..6581)
                     /locus_tag="VGQ24_12865"
     tRNA            complement(6484..6581)
                     /locus_tag="VGQ24_12865"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6545..6547),aa:Sec,seq:tca)
     gene            complement(6641..>6810)
                     /locus_tag="VGQ24_12870"
     CDS             complement(6641..>6810)
                     /locus_tag="VGQ24_12870"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HEV8455784.1"
                     /translation="TTVFLVDMGDFAAMNEAYGRAFGTHRPARSTVAVAALPRGAKVE
                     IEVIAVVRGKK"
BASE COUNT         1255 a         2222 c         2250 g         1083 t
ORIGIN      
        1 cagtgtcggt gctagtggtc caggcccact gccccggcgg tggaccggga tcgagtgtga
       61 agcgatcctc gtgcgccgcc gagtccaggg gataccggta caagttccag ctcaggtcgt
      121 gaaagccacc caccagcagt ccaccgctgt cggggagggc taccgcgtcg aacgccccgc
      181 tccatgccga cgtctcgcgc cttccctgcc ccagggtgtc catcgagaag acgttcagga
      241 caccgtcccg attggaggtg aagtagatcc gcccgtctgg cccccacgac ggggcttcat
      301 ccacccaatc accccgggtc agctgggtaa cgctcccgga tgaaagatcg agcatgaaca
      361 cgttcaccgc gccgtcgagc ccccatgacg tgcggtccga ggcgaagacg agacgccggc
      421 catcgggact gggactggga tcgagatcct gaaagcggtc gcgggtcagc ggctcgagag
      481 tgccctcggg gagacggacc cggtagagat tggagacgcc actctcggac agtccgctga
      541 acacgatgct ccggccgtcg gccatccaca ttggcgagag aatcgagacc agccgatcga
      601 attggtagcg gccggccgtc ctggcgcgct tcagatccca gaccacgagc gcgtctctgt
      661 caccgtagcg ggcggcgaac agcaggtagc cgggccgcga cgcatccatt cgggaatcga
      721 aggggtggaa tgattcgagg tcggcggagc gtcccgcggt cacgatggtg cgggagcggc
      781 ccccgtccac ccgcttgcga taaatcgtga catacccggt agccggcgag agatagatca
      841 cttcacccga acggtcgccc gtggtgtcgg gcagataggc gggtttgatg gcaagacggg
      901 taatctcccg acccagcacc gccagcgggg ccagactatc caccgacggg tagaagtccc
      961 ggcgcattgc cagctgaaac tcctcactca gctcgtcgag cgttcgccca taggtggcgt
     1021 atatcgcgtc ctcgaacgtg tcgtgccgat tcaactcctt atacatgtag gcgacgcgcc
     1081 agtcgccata ggtatcggcg agccagcgat ggattcgccc acccagtgga tacacaatcc
     1141 cgcccgtcac gtaggtgagc tgccgcaatg acgggagccg tccggtgaag gtgatgtcgc
     1201 ggagcaccat gtagtcgcgc gcgtcttcac cccccgacca cagctccgcg aggccctcac
     1261 tccaccacag cgggaagctg aagcgccccg atcgaggtgc ctggtaatag ctctccgact
     1321 gcagatcgat ctggaagaca tgcaccatct cgtgccgcag ggtgtgccgg aactcggcga
     1381 aatttccccg gaacggcagc gccactctgc gcttcagaaa gtcggtggcg ccgaggagcc
     1441 cttcgggcgg ggtgaacggc aggacgttgg tctgctcgaa atccgtgtgg gaggcgtaca
     1501 cgatgagtgg gatgcgagcg gccacgtcgt gtccgaactg cacggcaagc gtgtcgtagc
     1561 tggcttcggc atacgccaat gccgccggag ccagctcggc ttccgccggg taatagtaga
     1621 ggtcgacatg gggtccccga atgatgcgcc aggcgagctt tcggtactgg atcttgttct
     1681 gaccgaaggc gaaaaactgg gcgtggagag agacggagaa gacggagagg atcgagagga
     1741 cgaaaaggag cctacccatg cgcgcagcga ataggatccc tgatgtcagg ccgcccttgt
     1801 ttctcatgct cagagccttc actctgttca tcgtttccgt cctctccgtc acttcctccg
     1861 tatcgtccgg atcacatcgc cctgagtgat gcgggccagc gcgccgacgt tgccgaccgc
     1921 gcgcccgaag acggtatagg tcccatccag gtgtggctgc ggagcgagat tgatgaacca
     1981 ctggctcgcg ccggtatccg ggccggagag cgccatcccg agcatcggct tgatgccgta
     2041 tcggcttcga ttgatctcat cgcggatcga tccgcccggt ccgccaaacc cgtctccccg
     2101 aggatcaccg tcctgcacga cgaagttcgg cacgacccgg tgccaccgat tgccgtcgaa
     2161 gaaccgccgg tccacgagcc ggagaaagtt ggctacggtc aggggggcct cgggaccgta
     2221 gagttccacc tcgagcacgc ctcgctggtc gatgtcgatc aatacatgcg gacgggccac
     2281 cgagtcgggg gcgacgacga accggcgtac cacatcgcgg taatcctgga gcgtgcggcc
     2341 ggtcgcgatc ggatacgccg gtccccaacg ctcggaagcg gcgggccaat tggactcggc
     2401 ccagtgccga accaaatagt tggacggacg tggcagggtc gaaagaaatt cacgatctac
     2461 ccgctcccga gcctgggtgg tgctcccagc gattgctgca atgccgccga gtgccgagag
     2521 agcggcatcg ggaaaggagt cgcgcgacga gcgggcgtac atcgccgcga gcgccgacag
     2581 atcggccgga tcggccgcgc gcgccaccgc atcggcggcg acgctgcgaa cggccgcgtc
     2641 cgaatgaacc agcagccggc gcgacgtcgc gacgagagcg gcgtcaggcc ccggcaccgc
     2701 agaggcccag gcctgaagtc ccgcggcgat gacgcgcccg tcggcgtcgg cgatgaacca
     2761 gggtgcgccc ttggctccgg ccgcggccca accttcggcc gcagccgccc gatcccgcca
     2821 gtctgcacta gaccgccatg gcgccgaggc ggtccagagc gaacctggat cggtgcgcgc
     2881 cagcgccagg agcgcctctc ggcggagggc aaagcttccc ttccccttca acacacgcct
     2941 aagggccacc gtggccgtgg aaccgctcag ctcccccaag gcggaagcgg cctggactcg
     3001 cacgttgccg tcagggtcgt cgactctcgg agcgacagtg gccgagagtg ccgaatcgtg
     3061 gtaggtcgcc agcgagcgga gcgcactgat ccgcaccccg gggtcatcgt cgtcaagaga
     3121 cctcaccaga agcccggaca ccgtggtggg tgcaagctta gcccctacgg catagtcgcg
     3181 agtgagtgca cgcgttgccg tggctcgcgt tgccgcgtct ggagcccgaa gtgcccccat
     3241 cagctgattg gccgctacac ccgagcgaag ccggccgagc gagtagatcg tgcgccaccg
     3301 aatgctctgc agagtatcgt ccgcaaaggg caccagggca tcggcgcggg ccgcggggcc
     3361 gagccgccag gtctcgagca gcatctggct ggtggcagga gcggggtcgg tctgggatag
     3421 ggccaccgtg ccttgaagga cggaagcgaa gaactcggca cttcgacgac cgccgatctt
     3481 ggccagcgcg ctcaccgcct cgtcggccgt ggcggtatcc agtggcggca gtccggtgag
     3541 gcgctcgatc aacggctgga cggccgccga gtcgcgcaga agaccgagcg cgaaggccgc
     3601 ggccacgctt actgtcgaat ccggttgctc caggagccgc agcagcaatg gcgtggcccg
     3661 cagatcgccg atccgtcccg cggccatggc agcgaccctc cggaccaccg aatcgggcgc
     3721 caccagcgct cgttgaaaga gctccggctg ccactgacgg gcgtcctccg cggcgagcac
     3781 aggcgcaagc tgctccacga ccgcttcctc ctgaccccac gcgatcgatc cgggcagcag
     3841 cgcgccggcg aggcagagga tcaaccgcgg cactaggtaa gtcacagtct gatcggatcc
     3901 ggtatcgggt gcagtgcagc ccgcacccgc tcggggagtc gggtcagcgc catccgggta
     3961 tcgagcgcga tgagcctggt ggatgcagta gccagcagtc ggtcttcctc ggcgtgctcg
     4021 acagcgtacc caaaatcgac ccggcgagat gccgcctcgc gtatccagca gcggatccgg
     4081 accggatcat cgtagcgagc cggctggcga aagcgtaccg aaacctcgct cacggccagc
     4141 cgcaggccgc ttgcctcgag ctctcggtaa ctcatgccgc actgcctgag gtattcggtg
     4201 cgggcgacgt ccagccagac cagataccgg gcgtggtaca cgacccccat ctgatcggtc
     4261 tcagaatagt tgacccgaac cagagtctcc gagatcggcg ggggctcggt ggccatactt
     4321 gcctcatggg gttgtagacg ctcgggacgg cgtgatacga cacggcggta ccgtcgatct
     4381 ccggaaacct acgcggttgc catcatgaga gggtgggtcc atctttggcg ccgtgcttgg
     4441 ccacaccctc gtcgtcgtct ccgacgccca ccttggagtg gcgccgcccg cggtcgaaga
     4501 ggcactcctc gagtttctcg acgtcgtgcc gcagctgggc gattgccttc tggtgaacgg
     4561 cgacctattc gatttctggt tctcctactc ccgagtgatc ccgcggcgcg ggtttcacgt
     4621 tgcggcggcc ctggcccgcc tccgccgacg gatgccgatc gtaatggtcg ggggaaacca
     4681 tgaccggtgg gatacccact tctgggagcg ggacctgggg ctgcggttcg agccactccg
     4741 ggcgaccttc aagatcggac gccgtaccgt ggcagcgatt cacggcgacg gagtagccga
     4801 cccgcgctgg caggcgaggc tgatccatgg aatcatccag catcgggtca cggccgccat
     4861 ctaccgtgtg ctgcacccgg atctcgggct tcggctagtg gattcactga gtcccctgct
     4921 cggcgaccac accatagatg aaaggaagct cgcgagcgcc gccgcgcgac agaccgactg
     4981 ggccaggcaa ctgctggcca aggaggactc ggtagggttg ctcatcatgg gtcacaccca
     5041 tcgcgcggtg ctgaccgagc ccctggcagg ccgacaatat ctcaatcccg gtgcgtggtt
     5101 cgacggattt cgttacgcgg tggccaccga gtctggggca gagctctgct gttttcagcc
     5161 gaaagcgtga accgtttcac tattcacgcc ttaccctagc ggcaccacct cggcctttcc
     5221 cagccgctcg ccgataaacc gcgagccaac ctgccggaat ctcgcttcat cgtcgctcac
     5281 gacgaagcgg tgatgcggct ttgactcagg aggggcctcg agggccttgt cggcaagtat
     5341 ggtttcgagc gccgtggccg tcgcctgtcc gctgtcaatg agcctgactt ccggccccat
     5401 cacccgctgg agcagtggct tcagcagcgg gtagtgggtg cagcccaaca ccagggaccg
     5461 gacgcacgcc tcgcgcagcc ctcggagata atccgcggcc accagctcgg tggcgggatg
     5521 gtcaaaccac ccttcctcca ctagcggaac gaagagcggg caggcgcgct gaatcaccgg
     5581 caggcccggc gcgagagcct ggatcgcccg gttgtaggcg tcgctcgcga tcgtgcccgc
     5641 cgtaccgatc accccgatcg gccctccctc tccagacgcg atggctgctc tcgcgccggg
     5701 cttgattaca cccagaaccg gtaccggcga agcctcctgg agggcgcgaa gtgcatgggc
     5761 ggtgctggtg ttgcaggcca caaccacagc cttgacctct tgagctaaca gccagtggag
     5821 aatttcgagg ctgtagcgct tcactgtatc gggtgacttg gggccatagg gcactcgggc
     5881 cgtgtcaccg aaataaatgg tcgactcgcg tggcagccgc tcatagatcg ctcgggccac
     5941 ggtgaggccg ccgatgcccg agtcgaagat ccctaccggg gcccggttca tcgcagtcgg
     6001 atggggaggg agaccgaggc gccaacaccg ccggggacgg cttggaagcg aagatcaccg
     6061 ggaaagtcgg caaggtgagc cgatacgaag gcctcgagtc ccgcgaacaa gtgattgaac
     6121 gcgagcagta cgatccagtc ctcatgctcc tggcgcttat cgtcggcgcg gactgctccc
     6181 acccggcgga gataacgcaa ctcccttcgg gtcttgagcg tcatacccag ggcaactccc
     6241 tcccacccga tgagaatgcc gccggccaac ttacggttca gccgggcctg tccccaaccc
     6301 gggataagca gggagcgcca cagggcgttg agcgggctga tgtagcggcg ggataaggta
     6361 tcgggctgga cggccgccgc gggccggcgg acggcagccg agtcctgggc agcgagggtc
     6421 ggggcaaatg cggacaggaa caggatcacc gtggtacgca actgaatcga catcgagcag
     6481 gggtggcggg agcgtgtggg aatcgaaccc accggagccg ccgaaggcgc ctccatcgcg
     6541 gttttgaaga ccggccagac caccaggccc gatccgctcc cgtcacctgg aaggtaagag
     6601 gtgaggggtg agaggtgaga gggaggccca gagaaccctc tcacttctta cctctcacca
     6661 cggcgatcac ttcgatctca accttggcgc cgcgcgggag ggccgcaaca gcaacggtgg
     6721 agcgcgccgg ccggtgggtg ccgaatgccc gcccgtaggc ctcgttcatg gcggcgaagt
     6781 ctcccatgtc cacgaggaag acggtggtct
//
LOCUS       DASYRV010000480         2828 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_609029, whole genome shotgun sequence.
ACCESSION   DASYRV010000480 DASYRV010000000
VERSION     DASYRV010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2828
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_609029"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..408
                     /locus_tag="VGQ24_12875"
     CDS             <1..408
                     /locus_tag="VGQ24_12875"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: protein motif:HMM:NF013327.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEV8455785.1"
                     /translation="VLFPLAVTWLCDSFAMWGGKAIGGAKLWPSVSPGKTRAGGIAGL
                     IGGVAAALVYVPLVLAPVGHAFPLAQAAAMGLVIAIVAQVGDLVESLFKREAGVKDAS
                     QLIPGHGGVLDRFDSLYFVLPVSAVLYRAFGIL"
     gene            405..1505
                     /gene="dxr"
                     /locus_tag="VGQ24_12880"
     CDS             405..1505
                     /gene="dxr"
                     /locus_tag="VGQ24_12880"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEV8455786.1"
                     /translation="MSRRGVVVLGSTGSIGTSTLNVLRRHPERFRLVALTAGSNATLL
                     AEQIAEWQPEFAGLVSGNGPACLLEAATHPDAHIVVNAVVGFAGLAATLAALRAGKRV
                     ALANKESLVVAGELVRAAAREGGGELVPVDSEHSAVLQCIAGRESALRRLILTASGGP
                     FRDWSPDRLRQASVPEALNHPTWRMGSKISVDSATLANKAMEVIEAHHLFALPYDQVE
                     VVVHPQSIVHALVEFTDGSVLGQLGFPSMELPILYALTHPERVADPAVRAFDPVAAGA
                     LTFEPLRTEVFGAFRAGVAAGRLGGTAPAAFNAANEVAVKAFLSGRIRFGSIAEVIER
                     TLEGHEVMPVGSLEMVQQADRAARALAERLAA"
     gene            1502..>2828
                     /gene="rseP"
                     /locus_tag="VGQ24_12885"
     CDS             1502..>2828
                     /gene="rseP"
                     /locus_tag="VGQ24_12885"
                     /inference="COORDINATES: protein motif:HMM:TIGR00054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEV8455787.1"
                     /translation="MSGVLLNILALIVVLGVLIFVHELGHFLAAKAAGIYVHRFSLGM
                     GKPIRALTRKRGETEYAVSWLPIGGYVKMASREEDPASSALEGGAASATVPPDRVYEA
                     KPVWVRIIVILAGVTMNTLFAWLVFFGLTYANGLTVVPITRVGAVAPVLPAGAEALGQ
                     LVPGDRIVAVAGRPVASWEDIQEIFLTNAADSFRVELEGKPALTIRLHRDALESRLHA
                     VQALQPFITPVIGEVVPGGPAARAGVRRGDTLISVMGQPVSQWQDVVGLIESRPDSDV
                     RLTVGRPEGRSELQAHTLTDMVKDSTGIRPVGKLRLGPEIPTVHRPLSLGQAAVAGGR
                     QTLAVSTQIVRLVRGMFSGRVSTREIGGPIAIGIAAGQSAQLGFAAFLAFMATISVNL
                     AVLNMLPIPVLDGGQFLFLLGEAVLRRPLSIKLRERLTFVGLILIALLMV"
BASE COUNT          391 a          927 c         1014 g          496 t
ORIGIN      
        1 gtgctgtttc cgctggcggt gacctggctc tgcgacagct ttgcgatgtg gggcggcaag
       61 gcaatcggcg gcgccaaact gtggccttcc gtcagtccgg gaaagacccg ggcggggggc
      121 atcgccggcc tgatcggcgg agtggccgcg gcgctggtgt acgtcccgct ggtgctcgca
      181 ccggtgggac acgcctttcc gctggctcag gcggcggcga tgggactggt cattgcgatc
      241 gtcgcccaag tgggcgatct ggtcgaatcg ctcttcaagc gcgaagccgg cgtgaaggat
      301 gcgagccagc tgattcccgg gcatggcggg gtgctcgatc gcttcgattc gctctatttc
      361 gtgctgcccg tctcggccgt actctaccgc gcgttcggca tcctgtgagc cggcggggtg
      421 tggtggtgct cggctcgacc ggctcgatcg gtaccagcac gctcaacgtg ctgcgtcggc
      481 accccgagcg gtttcgcctg gtggcactga cggcggggtc caacgccacc ctgctggccg
      541 agcagatcgc ggagtggcaa ccggaattcg ccgggctggt gagcggcaac ggccccgcct
      601 gcctcctcga ggcggccacg catccggatg cccacatcgt ggtgaacgcg gtggtcggtt
      661 tcgcgggact ggcggccacc ctcgccgccc tgcgtgccgg caaacgcgtc gccctcgcca
      721 acaaggaatc tctggtcgtg gcgggtgagc tggtccgcgc ggcggcgcgg gagggcgggg
      781 gagagctggt cccggtggat tccgagcaca gcgccgtgtt gcagtgcatc gcgggccggg
      841 agagcgcgct gcggcgcttg atcctcaccg cgtcgggcgg tcctttccgc gactggtcgc
      901 ccgatcggct gcggcaggcc agcgtgcccg aggcgctcaa ccaccccacc tggcggatgg
      961 ggagcaagat cagcgtcgat agtgcgaccc tcgccaacaa ggcgatggaa gtcatcgagg
     1021 cgcatcacct gttcgccttg ccgtatgacc aggttgaagt ggtggtccat ccccagagca
     1081 tcgtccacgc tctggtggag ttcaccgacg gcagcgtcct gggccagctg ggcttcccct
     1141 ccatggagct gcccatcctg tacgccctga cccaccccga gcgcgtggcg gaccctgcgg
     1201 tgcgggcgtt cgatccggtc gccgccggcg cgctcacctt cgagccgctc cgcaccgagg
     1261 tcttcggagc cttccgggcc ggcgtcgcgg cgggccggct gggtggaacg gcaccggccg
     1321 cattcaacgc cgccaacgaa gtggccgtga aggcgtttct ctcgggtcgc atccggttcg
     1381 gcagcattgc ggaggtgatc gagcgaacgc tggaaggcca cgaggtgatg ccggtcggtt
     1441 cactggaaat ggtacagcag gcggaccggg cggcccgggc cctcgcggaa aggctggcgg
     1501 catgagcgga gtcctgctca acatcctcgc actgatcgtg gtgctcgggg tgctgatctt
     1561 cgtgcacgaa ttggggcact tcctcgccgc caaggccgcc ggcatctacg tgcaccgctt
     1621 ctcgctcggc atggggaagc cgattcgggc gctgacccgg aagcggggag aaaccgagta
     1681 cgcggtgtcc tggctcccga tcgggggcta cgtgaagatg gccagccggg aggaggatcc
     1741 cgcatcgtcc gcgctggagg gtggggccgc gagcgccacc gtacccccgg atcgcgtcta
     1801 cgaggccaag cccgtgtggg tccggatcat cgtgattctg gcgggcgtca cgatgaatac
     1861 gctcttcgcc tggctggtgt tcttcgggct gacctatgcg aatgggttga ccgtggttcc
     1921 gattacccgg gtcggagcgg tcgctccggt gcttcccgcc ggcgccgaag ccctggggca
     1981 actggttccc ggggaccgca tcgtcgccgt tgccgggcgc ccggtggcgt cctgggaaga
     2041 catccaggag atcttcctga cgaatgcggc cgattcgttt cgggtggagc tcgagggcaa
     2101 gccggccctt accatccggc tgcaccgcga cgcgctcgag tcgcgcttac acgcggtcca
     2161 agccctgcag cccttcatca cccccgtcat cggtgaggtg gtgcccggag ggcccgcggc
     2221 ccgcgccggc gtgcgccggg gcgacacgtt gatcagcgtg atggggcagc cggtctcgca
     2281 gtggcaggat gtggtgggcc tgatcgaatc gcgcccggac tcggatgtgc gcctcacggt
     2341 gggccggccg gagggacgca gcgagctgca ggcgcatacc ctgaccgaca tggtgaaaga
     2401 cagcaccggg atcaggcccg tggggaagct gcggctcggc cccgagattc ccaccgtcca
     2461 tcgcccgctg agcttgggcc aggcagcggt cgccggtggg cggcagacgc tcgcggtgtc
     2521 gacccaaatc gtccggctgg tccgcggcat gttcagcggg cgggtgtcga cccgggaaat
     2581 cggcggaccc attgccatcg gtatcgcggc agggcaatcg gcgcagctcg gcttcgcggc
     2641 gtttctcgcc ttcatggcca cgatctcggt caacctcgcc gtcctgaaca tgctgcccat
     2701 tccggtcctg gacggaggtc agttcctctt tctcctcggt gaggcggtcc tgcggcgccc
     2761 gctttccatc aagctgcgtg aacgactcac cttcgtggga ctgatcctga tcgcgctcct
     2821 gatggtgc
//
LOCUS       DASYRV010000481        24830 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_609150, whole genome shotgun sequence.
ACCESSION   DASYRV010000481 DASYRV010000000
VERSION     DASYRV010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 24830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24830
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_609150"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..743)
                     /locus_tag="VGQ24_12890"
     CDS             complement(<1..743)
                     /locus_tag="VGQ24_12890"
                     /inference="COORDINATES: protein motif:HMM:NF018190.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate binding family 9 domain-containing
                     protein"
                     /protein_id="HEV8455788.1"
                     /translation="MGDPTTAVALYFALAGMVPVAQGDSVPKPPESLMVQAQRLQRGF
                     TLDGVLSEPDWATARPVSNFTQREPHEGAAATERTEVRVLYDDDALYVGARLYDSRPD
                     SIRAQLARRDRITSSDRFIVFLDCYHDRRTGFFFGINAAGTLYDGTLFNDDWDSDTWD
                     GVWEGKASRDSSGWTAELRIPYSQLRFQRQKANRWAINFKREIARRNELDYLVRTPSN
                     GSGFVSRFVDLVGIEEVSPPSRLEVLPYVT"
     gene            complement(912..1655)
                     /locus_tag="VGQ24_12895"
     CDS             complement(912..1655)
                     /locus_tag="VGQ24_12895"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEV8455789.1"
                     /translation="MRRILYTLLVFSALPAPADAQTLAQRIATVVSGTVRLSFAARPG
                     VCGDGLHNIRMVDRNDEWEDDCEPQPVRVALQVHERRVTEVRSYVGGRWRSGGSATEL
                     GTVRPQDAAAYFISLAERDGGLSGDPLLPAALADSITIWPALLRLARTPAVPLETRRT
                     AVFWLGEAAGAAAARALDSIARDSTGDRDVRKQAVFALSQRSGNQGVPALLRIARTNP
                     DPELRKTALFWLGQSEDPRALALFEEILR"
     gene            complement(1665..3158)
                     /locus_tag="VGQ24_12900"
     CDS             complement(1665..3158)
                     /locus_tag="VGQ24_12900"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEV8455790.1"
                     /translation="MYGMQVALALAAAVALADGSPSPRALPGRVAVRDLPADSAGLRL
                     PAPWLQGDPADSLYRSARELLNRRDYRTAAQLFGRIPARFPRSGYAPDAFYWQAFALY
                     RLGGDRELRLARDALRRQQVRFPKAATHGDAAALEQRIQGELARRGDSKAAGEIADAA
                     RRAGDIPTPPTPPTPPTPPTPPTPPTPVTSSWSWSSSSSSSDSRCKEADDDMKVAALN
                     ALQQMDEAKARPILRRVLARRDPGSACLRRKAVFLVAQQNEPGTEDLLLESVRTDPDP
                     EVRRQAVFWLSQVGTERAVGALDSILRISKDPEIQDKAVFALSQHGSPKAQQALRAYA
                     ERAEVPDALKEKAIFWIGQNQSPDNAGFLRSLYGRLKSEELKRKVLFSLSQMGGEENG
                     RWLLGIARDTAQGIEMRKQALFWAGQGGVSLGELTKLYGSVGDQQMREQLIFVYSQRD
                     EPEALDKLIEIAKRDPNPDLRKRALFWLGQSEESRAVQALQDIIEQP"
     gene            complement(3158..3817)
                     /locus_tag="VGQ24_12905"
     CDS             complement(3158..3817)
                     /locus_tag="VGQ24_12905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455791.1"
                     /translation="MMLDDRLDDQLRDAAQDYNDPPETPREAIWERIVEARAAKREKT
                     ITPITPFRPLRHLRPLSWAAGIAAVLALGIGLGRLSIDSTPPPAGPGPVATKTPPRVR
                     TAAYQIATTEHLSQSEAFLTLFRASVRQGGNEQLASATARQLLATNRLLLDSPAANDG
                     KIRLLLQDLELVLAEIAQLSPQSRSRDLDLITDGLERGGVMSRLRTAVPSGPSTTQGA
                     L"
     gene            complement(3817..4350)
                     /locus_tag="VGQ24_12910"
     CDS             complement(3817..4350)
                     /locus_tag="VGQ24_12910"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEV8455792.1"
                     /translation="MDDQELIGRVLAGDPSAERALYDAQVDRVFRLVYRMAGDLDRAQ
                     DYTQETFIRAFARLREFRGEAALSTWLGSIAISIALNGLRKVRRLRDREVALDEAPPM
                     GRTIPEAEPDLKDRLAQAIDGLPDGYRAVFVMHDVEGYTHEEIASSLGVPPGTSKAQL
                     FRARARLRDALADFAKD"
     gene            complement(4727..5416)
                     /locus_tag="VGQ24_12915"
     CDS             complement(4727..5416)
                     /locus_tag="VGQ24_12915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455793.1"
                     /translation="MTRTSILLILLVWAGPGALMGQAKAQAQSPPQSGFDSFLLLVAP
                     RDTITIKRQLRAATEAGTQAESRRQQAETMRLGARGRIESKKVEMVRIKERISLAKKE
                     NREADRLGLEAERKAAEREKGLFERREELRQAEIEVETSRAELAGLTQRALQLELQLA
                     VRRAGRSRTPIGGAGGASLDRVIGELEKQTLEAQRSQALYSTEVAAREIKVIDRRLEL
                     LEAQQKVLGGE"
     gene            5616..8111
                     /gene="gyrA"
                     /locus_tag="VGQ24_12920"
     CDS             5616..8111
                     /gene="gyrA"
                     /locus_tag="VGQ24_12920"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEV8455794.1"
                     /translation="MTAPNSRERILPRLIEEEMQQSFINYSMSVIVSRALPDVRDGLK
                     PVHRRILYAMNELGLVPGRGYKKSATVVGDVLGKYHPHGDSSVYDALVRMVQQFSLRY
                     PLVDGQGNFGSVDGDPAAAYRYTEARLTRVAMTLLEDIDKNTVDFQANFDDRLREPTV
                     LPSKIPNLLVNGSSGIAVGMATNIPPHNLREVVKAVQVLVDNPDATIGELRKAIKGPD
                     FPTGAYIYGREGIKEAYETGRGRVIMRARAQIEEKETSNRHQIVVTEIPYQVNKENLV
                     KAIAELATEKKIEGIVGINDESDKEGMRIVIELKRDIIPNVVLNQLYKHTQMQTTFGV
                     IMLALTNGAPKIMNLKELLQHFIDHRHTVVIRRTQFDLDAAQAREHILDGLKIAVDNI
                     DEVIKIIRSSEDTPQADGRLRKRFGFSEKQSDAILNMRLAKLTGLEIEKLEAELKEVR
                     ATIKELKGILASKPKRMAILKEEMDEVASTFGDERRTEIVADQGEFTVEDLIAEEDMV
                     ITVSHGGYIKRIPITTYKRQRRGGRGLNGADLKADDWVEHLFIASTHDYLMFFSNRGQ
                     VYWLKVHEIPQAGRAARGKPVVNCIAIKPDEQIAALVPVREFTEDQSLIFATRKGTVK
                     KTVLSAYGNVRATGICGINVDKDDELIDVQVCDQNSDIVLATKDGMSIRFHQGDVRDM
                     GRATTGVKGIELEKDDEVIGMVVVRRDATLLVVSEKGYGKRSELLDYRVQKRGGKGII
                     TLKKTDKTGSIVALKEVIPEDELMMITRHGVIIRLPVDGIRVIGRNTQGVKVMNLDSG
                     DAVVDVARVVKEDEGGPDEAPSGDEVTPTAAVE"
     gene            8126..9181
                     /locus_tag="VGQ24_12925"
     CDS             8126..9181
                     /locus_tag="VGQ24_12925"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine dehydratase"
                     /protein_id="HEV8455795.1"
                     /translation="MTSAANRWAEAPRVVVDPRPTVSLEVLRSAAKGLEGIAVRTPLL
                     DAPALSGLLHLPVALKCEHLQPIGAFKIRGAYTAIARLSPERRARGVITYSSGNHGQA
                     VAFAARLLGIRAVVVMPERAPAIKVEGVRRYGGEVVIAGNSSAERWERACALAEERGL
                     AMVPPYESLDVIAGQGTCGLEILEEWPAVGTILVPVGGGGLIAGIAAAVSALKPTVRV
                     IGVEPVGAPKLARALEAGRPVKLDRTDSLADGLLPLSIGELPFAVLSGVVRESMLVSE
                     EEIAAAVRFLSREMGLSPEPSGAVTTAALLGGRAPISGPTVAVVSGGNVDPELLKRLV
                     APFDELRAGSSASSGQA"
     gene            9182..10612
                     /locus_tag="VGQ24_12930"
     CDS             9182..10612
                     /locus_tag="VGQ24_12930"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEV8455796.1"
                     /translation="MTVAPKILVADDDQALSRTLSWILKENGYDVFTSLGGEHLFEHL
                     TAEQFDLLLLDIMMPKVDGLQLLQRVKADPRFKDLPVLMISSMPPEEATVRSLGLGAA
                     DFIPKPFRVRELLARVKAHLRVGRELNQARAEARSRSEMMDIMQEVTASLKPEEIYDI
                     LVRRVAQGLSIARCSIIIAGPEDETGIVVAASENPNLHNLKVDLRRYPEIRHALATGE
                     RVLVRDVQTDPLYRGVRDAWEAEGRPVETRSAVALRFSLRQQPAGVFFLRTTSEDAPL
                     NEHDVQFAEEVINAAVAALERAYDLENAVLGQEQMRHLAETDPLTNCFNRRALMEKLE
                     QEMDRAARYATMLTGMMVDIDNFKQINDTYGHLVGDRVLKQLANLLKREQRSVDIVAR
                     YGGEEFVVLLPETTNAESRNFAERILRRVSTHDFGEAGKAVRVTISIGIASYPDERVS
                     DGESLLRLADTHLYRAKNDGRNRFSD"
     gene            10774..11718
                     /locus_tag="VGQ24_12935"
     CDS             10774..11718
                     /locus_tag="VGQ24_12935"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEV8455797.1"
                     /translation="MPPLEWEAERALQDKLTARVASLTGQVLDQRYQIARKLGEGGMS
                     YVYQALEIGTGRPVAVKILIPKLSRDPASVERLRREATIATRLNHPNVCPILRLGETS
                     DRLLYLVMPYLEGEPLSEHETRRGPFPVAEGIPLLVQVCQGLGHAHDLQIIHRDLKPE
                     NVMLVPDPDTPTGLRAVVMDFGLAKERRAGPDVVKLTATGIVLGTPEFMSPEQIRGKP
                     LDGRSDVYALAILAFELFTGQLPFTGKSAQETMIARLRGAPLRLRDAKPDLPAKLEAV
                     ITKALAVNPAERYGSMNELGHAFESVVSPGVLGRLFGR"
     gene            11754..12263
                     /locus_tag="VGQ24_12940"
     CDS             11754..12263
                     /locus_tag="VGQ24_12940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455798.1"
                     /translation="MLQMQAGGVHMRQTLLLLTAVFCAACSRERTGNTSASAYTPDSD
                     SSVKAAGVEGTNSGSELEAPRLIPAIQNQLNLMASGGQPTDPENLTAYKNLAGDVVNS
                     MAADLHRAGLADSGEFRVLRDSVMKDLGGGAGTESKLDRSKLTEHIPRMRRLISMYQQ
                     AMRAAGNPQ"
     gene            complement(12279..13424)
                     /locus_tag="VGQ24_12945"
     CDS             complement(12279..13424)
                     /locus_tag="VGQ24_12945"
                     /inference="COORDINATES: protein motif:HMM:TIGR03169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEV8455799.1"
                     /translation="MADLQESTQRLVLVGAGHAHLFVLEQLALGHFPRAEATLLSPHA
                     AHLYSGMLGGLITGRYGREDAYLDLPSLAAKAGARFVLGSAVRVDPANRRITVDGGRQ
                     LPYHIASFAIGSGIERAKTQDRDAVLSVKPIDGAGRIAEAVDRLPQAEPTVVVVGGGA
                     GGIELALNIKARFQALGRTGAHVVLVDEQQRLVANRSEACAREAARVLGQNQVQVILG
                     MRVGEVGSRTVRLGGRTELPYDTLVWATGTSAPEIFRASGLETDNAGFLLVDSTLRSV
                     TSSAIFAAGDAATLRPFPATPKSGVYAVRQGPVLARNLALALRGLASDHLQHYRPQPR
                     SLVLINTGDGRAILSYGSMALTGRWVMRLKDRIDRAFMRRFRRLAAS"
     gene            13556..14206
                     /locus_tag="VGQ24_12950"
     CDS             13556..14206
                     /locus_tag="VGQ24_12950"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEV8455800.1"
                     /translation="MVAITRRETTPNLFGLQRLNRILDEAFAGLPFPEQGGNILTANW
                     VPATDISEDANTIQVTMELAGVEPDDVRISLENNVLTVRGEKRQEEEENDDRVYRVER
                     IYGMFQRTFVLPNTVEPERIEAQYENGVLRVRIPKAERARPREIPVNFSASGASKVKT
                     TGQSQGAVGQGSQATGGQTTQGTETPAGNGGEQQTSSSRRAQGSRSGTEGSRGSRR"
     gene            14307..15602
                     /gene="hemA"
                     /locus_tag="VGQ24_12955"
     CDS             14307..15602
                     /gene="hemA"
                     /locus_tag="VGQ24_12955"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: protein motif:HMM:TIGR01035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HEV8455801.1"
                     /translation="MTAFAAPYPCSVLPDLSFHVIGISHHTARVDERERFALTHGETV
                     ALLREQQEAGRSALLLSTCNRCEYYWSGSEDGEAWLRRLAQTRGAAPYTVFTRHDGEA
                     AVRHLFIVAAGLDSQVLGETEILGQVRRAYDAARAAGTTTRDMDLILSGALAAGRRVR
                     RETVLGRHPASVSSAAVDLMAEQWGIIGSRGVVVLGAGEAAEGILRALSERGATNIAL
                     LNRHPERAQVLAEAWGATAGDLIQLEQKLEAADLLVVATASAHPVVTSAELARVVARR
                     GNRELFVVDLGVPRNVDPAARAMAAVQLFDLDDLQRLCCPAAGTAPAALADAERVIDD
                     ELARLGLSLRSRVVAPRLAELHRIGVEMAEQESAWALAQLESLSDRQREIVRQMADRL
                     IRRVLYPVSRTLRTEQDPAGNVIPGEVKNLGSSFREPPS"
     gene            complement(15643..16749)
                     /gene="hemH"
                     /locus_tag="VGQ24_12960"
     CDS             complement(15643..16749)
                     /gene="hemH"
                     /locus_tag="VGQ24_12960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEV8455802.1"
                     /translation="MSGAGSGKPRTGIVMLNLGGPATLDDVEPFLLKLFADREIVQLP
                     FQRWLGPFIARRRTPRVRGLYAAIGGGSPILRYTEAQGRGMVARLDRLSPETAPHRFY
                     IAFRYTRPSSDDALQMMRADGVERAVAFTQYPQFSCSTTGSSLNELWRAASRTGLRDA
                     FQWSIIDRWPVHPGFIEAMTETVRDGLGQFAPADREKALILFSAHSLPLDVIERGDSY
                     PQEVGASVQRVVERLGASNPYILAYQSDVGPVRWLGPSTAQVLRRLGARGQKHVLVVP
                     IAFTSDHIETLSELDREYGEVAHEAGITHYRRAPALNDRPRFLDALAEMVRDHLKSGT
                     IHSSQYLTRCAGCTNPQCRNILNPVGRSARLGGR"
     gene            complement(16805..17458)
                     /locus_tag="VGQ24_12965"
     CDS             complement(16805..17458)
                     /locus_tag="VGQ24_12965"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEV8455803.1"
                     /translation="MTDRPIRVLVADDHTIVRTGIRHVLEGEPGFDVVGEASNGTEAF
                     ELAEELHPDVVVLDISMPGESGLQIATRLGTVSSPPRVLILSMHDNAEYVLESVRAGA
                     HGYLLKDTAATELRSAIRAICRGESYFSPPVASRLSAAVRGEHETPAAPLEQLTGRER
                     EVLEGIARGRTNKEIAAELGISYRTVETHRESLMKKLQIRTVAELTRFALGAGIVEP"
     gene            complement(17458..19230)
                     /locus_tag="VGQ24_12970"
     CDS             complement(17458..19230)
                     /locus_tag="VGQ24_12970"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing sensor histidine kinase"
                     /protein_id="HEV8455804.1"
                     /translation="MQGTPLANAVELDAALLQAAITAALAALCAFLYARYRKPYFAWW
                     AGAWGLYFLRIAAITSFLLTSHRIWLYWHQVVTGWTALALLYAALVFSQRVRWRWWYL
                     ALVLFPPVWSYVAIYRLKHFLWAAGPAVLFLSLATLWTGWVFFRYRQRVASSGATLLA
                     AAFGLWGLHHLDYPFLRARGAWAPWGYYLDILLALAVGTGILLLVLDDLRRGLGALSA
                     LSGDLQRAGRQQDVLDALLARPLSLAAVRGTALFSIEGSSGSLVRGAGVCARWTAGAL
                     RPPAASVLARVIETGRPQFTGDGFDAEPGHGTYAYAAVLPIFRGDAVIAALVLVGDAR
                     DPFTALDDKFLLALGHQVGAALENADLYSRLETRTVELARLSARMIEQHEEERGRLSR
                     ELHDETAQVFSVVKMELGLLRDRVQPDNAPRLDQILGLIDTGIRSIRSVTNDLRPSLL
                     DDLGLLPALRSLVADFSERSGIRTGLAVPTALPPLSREAELALFRALQEALSNVLRHA
                     HARSVDIGISISAAGVLLQVSDDGRGLPLGMTTERLELEGHMGLAGMRERITALGGTV
                     CIRRKEGAGALLEVLVPATDSGVE"
     gene            19293..20993
                     /locus_tag="VGQ24_12975"
     CDS             19293..20993
                     /locus_tag="VGQ24_12975"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HEV8455805.1"
                     /translation="MLRSSGLSPILVAAGLLAACQGRTENGGGDWSRFASGFIETYFE
                     ANPLFATYQGRHEYDGLFPDWSEAGLTRWMRRLHQLRDSAAAFPIDSSNTSARFEQEY
                     VIAVIDRDLFWGERADLPHRNPEFYTGGLDPNVYLAREYAPLPERMRAFTRYATNLPA
                     ALAHARSNLRTPMPKAYAKIGQGRITGLAEYLEGSVPAVFASVSDTTLQRQFATANAG
                     AAQALRELSAWFGQQEKRGTDNFPLGPERFSEMLRSTEGVDLPLDSLERRGREDMNRN
                     LVALKEACGRYAPGQSIQRCVARMNAHKAPGSPVQAAMQQLDTLEAFVRTKNLVSVPG
                     SERALVRESPPYQRFNFAYIDIPGPYEKNLPSIYYISPPDPAWPKAEQEAYVPGAADL
                     LFTSVHEVWPGHFLNFLHSNRAKSKFGQVFVGYAFAEGWAHYAEEMMWEAGLGNGDPE
                     THIGQLMNALLRNARYLSAIGLHTKGMTIAESERLFREQAYQDPGNARQQAARGTYDP
                     AYLNYTLGKLMIRQLREDWTSSRGGRDAWHDFHDRFLSYGGPPIPLVRRAMVGAGPAL
                     "
     gene            complement(21008..22027)
                     /locus_tag="VGQ24_12980"
     CDS             complement(21008..22027)
                     /locus_tag="VGQ24_12980"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8455806.1"
                     /translation="MGPRIRVLMVTSDWPWNSGGGPAVFIAQQVEFLRREGVDVDLFP
                     FRGARRPQNYALAWWEVRRRLNGGSYDLVHAQFGQSGLTALPKRIPLVVTFRGDDLEG
                     IFGENGRYIPAGWLLRCISRVVARQADAAIVVSEHMKRYLPGSVAAHVLPSGIDLELF
                     RPEPRAEARRRLGLAEEQRLILFVGNPVLARKRFALAQRAVDIVNRSIPTRLIVGWEL
                     PHPEIAALMSACDVLVCTSMQEGSPNAVKEALACNLPVVSVRVGDVPARLRGISGCEL
                     CPDDHAESIAAALERVLRRGSRIDGRSAMKHLDERLLTQRLIDIYRSVLPTGGALAKK
                     LVQAS"
     gene            complement(22036..23079)
                     /locus_tag="VGQ24_12985"
     CDS             complement(22036..23079)
                     /locus_tag="VGQ24_12985"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEV8455807.1"
                     /translation="MSRRRVPPLVSIVIPCRNEERYIARCLDSVLASDYPRERLEILV
                     ADGGSSDGTRPLLVRYVALHPTIVLLDNPRGTTPAGLNVAIRAASGDIVIRMDAHVLY
                     PSDYVSRLVAGLQESGADNVGGTLVTVPADDSPTAQAIAVGMSHYFGMGNSYFSAGTG
                     ERREVDTVPFGCYRREIFDRIGMFDEELIRHQDDEFNVRLITRGGRVLLLPDVLCRYF
                     ARSSFRQLARMYYQHGYFKPLVARKVGRELTVRQVIPAALVGCLSSSAALALWIPVAR
                     YLFALVAGSYALLVALFAARAAHSHGLRCAAALILVFPVLHFSYGSGCLRGIRDHLVV
                     RGAPHPGTLQLSR"
     gene            complement(23076..24179)
                     /locus_tag="VGQ24_12990"
     CDS             complement(23076..24179)
                     /locus_tag="VGQ24_12990"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEV8455808.1"
                     /translation="MALVGCGRISVHHVAALTAIRNVEIVAVCDLDEKAAREAATRHG
                     IRGCYSDAEAMLRERRPDAVHLLTPPESHLPLARLAAKYGAHMYIEPPFAGIQAEARA
                     ILELAREAGVQVCPGHSRLFDPVFVEACRRIRVGDIGRVISVRAEQGFTYEALARSAS
                     IPWSYSDDWRTFDNLICHPLYLACRFLTDPGLPRVVGLDLGIVREAGMEELRVLIPSD
                     TGLGEVSFSLCSAPEVSRIEILGTGGRVTADWQTMTVSTYRDSGLPSALARFTGSLLA
                     ALDLIRSGIGTLLGIATGKVKRHQGLRTIIERFYQSLREGLPPPVPPEEGVLNIRLMD
                     QIKEACKPFRKQRPELSMQQNAIRRGPRVGLTW"
     gene            complement(24211..>24830)
                     /locus_tag="VGQ24_12995"
     CDS             complement(24211..>24830)
                     /locus_tag="VGQ24_12995"
                     /inference="COORDINATES: protein motif:HMM:NF014740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HEV8455809.1"
                     /translation="PETAGGIAMLEMGEPVRILDLAEKLIRFSGRVPGKDVRIVFTGL
                     RPGEKLIEEQVSALEAGVPTSSEKIRISQTTESAGPQLVQNLSRLLAYLDAGDRDGLL
                     ATLCELVPECVPPLQDSCAAVTGGPRVNGGDAGQWGTLLDPSHVSWRERRRGVQGHPL
                     PPDLRVSDRRQGLTCRRKTARVGGRRGTDAGMSLATGSSAAHNGS"
BASE COUNT         4577 a         7962 c         8087 g         4204 t
ORIGIN      
        1 gtcacatagg gaagaacttc gagtcgtgat gggggtgaga cttcctcgat gcctaccaga
       61 tcgacaaacc tcgacacgaa cccgcttcca ttgctgggag tccggaccag gtaatccagc
      121 tcgttccggc gcgcgatctc ccgcttgaaa ttgatcgccc agcgattcgc cttttggcgt
      181 tgaaaacgaa gttgggagta cggaatcctg agctccgccg tccagcctga ggaatcgcgg
      241 cttgccttgc cttcccatac cccgtcccac gtgtcgctgt cccaatcatc gttgaacaaa
      301 gtcccatcgt agagcgttcc ggccgcgttg atgccgaaga agaaaccggt gcgacggtcg
      361 tgatagcagt cgagaaatac gatgaaacga tccgagctgg tgatccggtc tcgccgggcc
      421 agctgggccc gtatcgaatc cggacggctg tcatacaacc gggcccccac gtagagcgca
      481 tcgtcgtcgt agagaacccg gacctctgtc cgctcggtag cggccgcacc ctcgtgcggc
      541 tctcgttgag taaaattgga gaccggtctt gcggtggccc agtcaggctc ggagaggact
      601 ccgtccagcg taaatccccg ctgaaggcgc tgggcctgga ccatgaggct ctcaggaggt
      661 ttgggtaccg agtcgccttg ggctacaggt accatgcccg ccagtgcgaa gtagagcgcg
      721 actgcagttg tggggtcgcc cactggtgga cctccgcggc gccggtggcc ggcgtactga
      781 cgtgatggga ccggcgggga ttcgtgccac gcgccgggag tgaacgcgtg acttagacgg
      841 agggaacgac caaatggttg cctgctcgct tcgctcgcag gcgaccttcg gggctgcgcc
      901 cctacggttg cctagcgaag aatttcctcg aacagagcca gtgcgcgtgg gtcctcgctc
      961 tgcccgagcc agaacagcgc ggtcttcctc agttccggat cggggttggt ccgggcgatg
     1021 cggagaagcg ccggcactcc ttgattgccg gagcgctggg agagcgcgaa caccgcctgc
     1081 ttcctgacat cacgatcgcc tgtgctatcg cgggcaatcg agtcgagggc ccgtgccgcg
     1141 gcggcccctg ccgcttcacc gagccagaag acggccgtcc ggcgagtctc cagcggcacg
     1201 gccggggtgc gagccagccg gagcagggct ggccagatgg tgatgctgtc ggccagggcg
     1261 gccggcagaa gtgggtcacc ggagaggcca ccgtcccgct cagccagaga gatgaagtag
     1321 gccgctgcat cctgtgggcg aaccgtaccc agctcggttg ccgatcctcc cgagcgccaa
     1381 cggcctccaa cgtacgaccg gacctccgtg acccgccgct cgtgaacctg cagggcgaca
     1441 cgcaccggct gcggctcgca gtcatcctcc cattcgtcat tgcggtccac catcctgatg
     1501 ttgtgcaggc catcgccgca cacgcccgga cgtgccgcaa agctcaggcg caccgtcccg
     1561 ctcaccactg tagcgatcct ctgcgccaga gtctgagcgt ccgcgggggc cggcagagcc
     1621 gagaaaacca ggagggtata taagatccgg cgcacggtca cttcctaggg ttgctcgatg
     1681 atgtcctgga gggcctgcac cgcacggctt tcttccgatt ggcccagcca gaagagtgcg
     1741 cgctttcgca gatccggatt cggatcccgc ttggcgattt ctatcagctt gtcgagagcc
     1801 tcaggctcat cccgctggga gtagacgaag atcagctgct cccgcatctg ctggtcgccg
     1861 acgctgccat agagcttggt gagctcgccg agggagactc cgccctggcc ggcccagaac
     1921 agcgcctgct tccgcatctc gatcccctgc gccgtgtcgc gggcgatgcc gaggagccag
     1981 cggccgttct cttcgccacc catctgggag agggaaaaca gtaccttcct cttgagctcc
     2041 tcgctcttga gtcgcccgta aagcgagcgc aggaagcccg cgttgtccgg actctggttc
     2101 tgcccgatcc agaagatcgc cttctccttt agggcgtcgg ggacctccgc gcgttcggca
     2161 taggcccgga gcgcctgctg cgccttgggg ctgccgtgct gggagagcgc aaagacggct
     2221 ttgtcctgga tctcggggtc tttggagatg cgcaggatgg aatccagcgc gcccacggct
     2281 cgctcagtcc ccacctgcga gagccagaac accgcttggc gtctgacctc ggggtccgga
     2341 tcggtacgga ccgactccag caagaggtct tccgtcccgg gctcattttg ctgggccacg
     2401 aggaacaccg ccttacgccg caggcacgcc gatccgggat cgcggcgcgc cagcactcgg
     2461 cgcagaatcg ggcgcgcctt ggcctcgtcc atctgctgca gcgcattcag cgcggccacc
     2521 ttcatgtcgt cgtcggcttc cttacagcgc gagtctgagc tggatgacga ggacgaccat
     2581 gaccatgatg atgtaacagg cgtcggcggc gtcggcggtg tcggtggcgt cggtggcgtc
     2641 ggcggtgtcg gtggagtcgg gatatcaccg gctctgcgcg ccgcgtcggc aatctcgccg
     2701 gccgccttgc tatcccctcg tcgagccagc tctccctgga tccgttgctc cagcgccgcg
     2761 gcgtcgccgt gggtggcggc cttgggaaac cggacctgct ggcgccgcaa ggcgtcgcgc
     2821 gccagtcgca gctcgcgatc gccgcccaga cggtacaggg cgaacgcctg ccagtagaag
     2881 gcatccggcg cgtagcccga ccgagggaag cgggccggga tccgaccgaa cagctgtgct
     2941 gccgtgcgat agtcccgtcg gttcagcagc tcgcgggcgc tgcgatagag cgagtccgcc
     3001 ggatctccct gtagccaggg agcgggcaga cggaggccgg ccgaatcggc cgggaggtcg
     3061 cgcactgcga cccggccagg aagtgccctc ggtgaaggcg atccgtcggc cagggccacg
     3121 gcagccgcca aggcgagtgc aacctgcatc ccgtacatca aagcgctcct tgagttgtgc
     3181 tcgggcccga aggcacggcc gtccgcaaac gggacatcac gccgccccgc tccaacccgt
     3241 ccgtgatgag atccagatcg cggctccgcg actgggggga cagctgggcg atttcggcca
     3301 acaccagctc cagatcctgg agcagcaacc tgatcttccc atcgttcgcg gcaggcgagt
     3361 cgaggagcag ccggttagtc gccagtagct gccgggcggt tgcggatgcc aactgctcgt
     3421 ttccgccttg ccgcacggag gcccggaaca aggtgaggaa ggcttccgac tggctcagat
     3481 gctcggtggt ggcgatctgg taggccgcgg tacgcacccg tggtggcgtc ttagtcgcca
     3541 cgggaccggg ccccgcaggc ggcggagtcg aatcaatgga gaggcgaccc aacccgatac
     3601 cgagagccag gacggcggcg atgcctgcgg cccaactcaa aggacggaga tgacggagag
     3661 gacggaaagg tgttatcggt gttatcgtct tctccctctt cgccgccctt gcctccacaa
     3721 tccgctccca gattgcttcc cgcggcgtct ccggcggatc gttgtagtct tgggcggcat
     3781 cccgcaactg gtcgtccaat cgatcgtcca gcatcatcaa tccttcgcga agtctgcgag
     3841 ggcatctcgc agccgggcac gagcccggaa cagttgcgcc ttcgaagtcc ccgggggcac
     3901 accgagcgag ctcgcgattt cctcgtgggt atacccctcc acgtcatgca tgacgaatac
     3961 tgcgcgatat ccgtccggca agccgtcgat ggcctgcgcc aaacggtcct tgaggtccgg
     4021 ctccgcctcc ggaatcgttc ggcccattgg gggtgcttcg tccaaggcta cctcccggtc
     4081 tcgcaaccgc cggaccttcc gcaagccatt gagcgcgatc gatatcgcga tggatcccag
     4141 ccatgtcgaa agggctgcct cgccccggaa ctcccgcagg cgagcaaagg cgcggatgaa
     4201 cgtttcctgg gtgtagtcct gcgcccggtc gagatcaccc gccattcgat agaccagccg
     4261 gaagacgcgg tcgacctgcg catcgtataa tgcgcgctcg gcgctcggat ctcccgccag
     4321 tacccggccg atcagttcct ggtcgtccac ccggctccgg agcgtagggt caaggtctca
     4381 gcccgcatct ctgacacttc agtcctggaa acggttgcta ccaaatgctc aggcagccga
     4441 aggagcgcag ctccggaggc cgcctgagag cgtagctgcc tgggcgctac gctctcaggc
     4501 aacccttcag agcttgaagg catctcaagg gtacgttggc gacgggcagc ttgcttcacc
     4561 cggtcaattt tttacggaga tgctacgatg gtaatgctta ccgcggccga gccggtgagg
     4621 gtctatagag ttctggatgg agctggacgg gcaattggag aggtggtaca gccgagatcc
     4681 aggccggtgc tggcgccggg ggcaggaacc gtgctgctgc tacgtactat tcgccaccca
     4741 gaaccttctg ttgcgcctcc agcagctcca agcggcggtc gatcaccttg atctcgcggg
     4801 ctgccacctc ggtgctgtag agggcctggg accgctgggc ttccagcgtc tgcttttcca
     4861 gctcgccaat cacacgatcc aggctcgcgc cgccggcacc tccgatgggg gtgcgcgaac
     4921 gcccggctcg cctgaccgcg agctgcagct ccaactgcag cgccctctgc gtcaggccgg
     4981 cgagctcggc ccggctggtc tcgacctcaa tctcggcttg cctcagctct tctcgccgct
     5041 caaagagccc tttctcccgt tcggcggcct tccgctctgc ttccaaccct aaccgatcgg
     5101 cttcgcggtt ttccttcttg gcgaggctga tccgttcctt gatccggacc atctcgacct
     5161 tcttcgactc gatcctgccc ctggcgccca ggcgcatggt ttcagcctgc tgcctccggc
     5221 tctccgcctg ggtacccgcc tcggtggcag cacggagttg gcgtttgatg gtaatcgtat
     5281 cccggggagc gaccagtagc aggaagctgt cgaatccgct ctggggtggt gattgggctt
     5341 gggccttagc ctggcccatg agggcaccgg gcccggccca caccagcaag atgagcagga
     5401 tggaggttct ggtcatagta caggaagtat cgtcacccga gcttcaggcc tttaaggtgc
     5461 cagggatggc ggctccaacc ggtccagtag ccctcgacta actccatgtc gggccgtagg
     5521 ttccctcccc attcaacggt tgctggctcc gggcgctccc gactatattt ccggtccggg
     5581 cctcctcgtc gtcactgctc cagcacagga attccatgac agcaccgaac tcgcgcgaac
     5641 gtattctgcc ccgcctgatc gaagaagaga tgcagcagtc gttcatcaac tactcgatga
     5701 gcgtcatcgt ctcgcgcgct ctgcctgacg ttcgcgacgg gctcaagccc gtgcaccgcc
     5761 gcatcctcta cgccatgaac gagttggggc tggtgcctgg ccgcgggtac aagaagtccg
     5821 ccacagtcgt gggcgatgtg ctcgggaagt accatcctca cggcgacagc tcagtctacg
     5881 acgctctcgt ccgcatggtc cagcagttct cgctgcggta cccgctggtg gatgggcaag
     5941 gaaacttcgg ctcggtagac ggcgatccgg cagcagccta tcgctacact gaggcgcggc
     6001 tgacccgggt agccatgacg ctgctggaag acatcgacaa gaacaccgtc gatttccagg
     6061 cgaacttcga cgatcggctc cgggagccga ccgttcttcc atcgaagatc cctaatctgc
     6121 tggtgaatgg ctcgagcgga atcgcggtcg gtatggcaac caacatccca ccgcacaacc
     6181 ttcgggaggt cgtgaaggcc gtgcaggtgc tggtggacaa cccggacgct accatcggcg
     6241 agctccgcaa ggcgatcaag ggtcccgatt ttcccaccgg cgcgtacatc tacgggcgcg
     6301 aaggcatcaa ggaggcctac gagaccggtc gtggacgggt gatcatgcgg gcccgggccc
     6361 agatcgagga gaaggagacc agtaatcggc accagatcgt cgtgaccgag atcccctatc
     6421 aggtgaacaa agagaacctg gtcaaggcga tcgccgagct ggccaccgag aagaagatcg
     6481 aggggatcgt cggcatcaat gacgagtccg ataaggaagg aatgcgcatc gtcatcgagc
     6541 tgaagcgcga catcatcccc aacgtcgtcc tgaatcagct ctacaagcac acccagatgc
     6601 agaccacctt cggcgtgatc atgctggcgc tcaccaacgg ggcgcccaag atcatgaacc
     6661 tgaaggagct gctgcagcac ttcatcgacc accggcacac cgtcgtcatc cggcggaccc
     6721 agttcgatct cgatgccgcc caggcccgcg agcacatcct cgatggcctg aagatcgcgg
     6781 tcgacaacat cgatgaagtc atcaagatca tccggagctc cgaggatacc cctcaggccg
     6841 acggccggct ccgcaagcgg ttcggcttca gcgagaagca gagtgacgcc atcctgaaca
     6901 tgcgtctggc caagctcacc gggctcgaga tcgagaagct cgaggccgag ctgaaagagg
     6961 tgcgcgctac gatcaaggaa ttgaagggaa ttctggcatc caagcccaag cggatggcga
     7021 tcctcaagga agagatggac gaagtcgcca gcacgttcgg tgatgagcgg cggaccgaga
     7081 tcgtggctga ccagggtgag ttcacggtcg aggacctgat cgccgaagag gatatggtca
     7141 tcaccgtttc tcacggcggc tacatcaagc ggatcccgat cacgacttac aagcggcagc
     7201 ggcggggtgg gcgcggcctc aacggtgcgg acctcaaggc agacgattgg gtcgagcact
     7261 tgttcatcgc gagcacccac gactacctga tgttcttcag caaccggggc caggtgtact
     7321 ggctcaaggt gcacgagatc ccgcaggcgg gccgggcggc ccggggcaag ccggtggtca
     7381 actgcattgc catcaagccg gatgagcaga tcgcggcgct ggtaccggtc cgggaattca
     7441 ccgaagacca gagcctcatc ttcgccaccc ggaagggcac ggtaaaaaag acggtgctct
     7501 cggcctatgg gaacgtgcgg gctaccggaa tctgcggcat caacgtcgac aaggacgacg
     7561 agctcatcga tgtccaggtc tgcgaccaga acagcgacat cgttctcgca accaaagacg
     7621 ggatgagcat ccgcttccac cagggtgatg tgcgcgacat ggggcgcgca accaccggcg
     7681 tcaagggtat cgagctggag aaggacgatg aggtgattgg gatggtggtg gtgcgccggg
     7741 acgccacgct tctcgtcgtc agcgagaagg gctacggcaa gcggtccgag ctcttggact
     7801 accgggtcca gaagcgcggc ggcaagggga tcatcacgct gaagaagacc gataagaccg
     7861 gctcgattgt ggcgctgaag gaggtcatac ccgaggacga gctgatgatg atcaccaggc
     7921 acggggtcat catccggctt ccggtggacg ggatcagggt cattggccgg aacactcagg
     7981 gcgtgaaggt catgaacctg gactccggtg acgcggtggt cgatgtggcc cgggtggtga
     8041 aggaggacga gggagggccg gacgaagctc ccagcggtga cgaggtcact ccgacggccg
     8101 cagtggagta gggttatcat tctcgatgac ctccgccgcg aataggtggg ccgaagctcc
     8161 ccgggtcgtc gtcgacccgc ggcccaccgt atcgctggag gtattgcgat ccgccgccaa
     8221 agggctcgag ggaatcgcgg tgcggacgcc gttgctcgat gcacccgccc tgtccggcct
     8281 gctccacctg ccggttgcgc tcaagtgcga gcacctccaa ccgatcgggg ccttcaagat
     8341 ccgcggcgcc tataccgcca tagcacgtct atctccggag cgccgcgccc gcggcgtcat
     8401 tacttactcc agcggcaatc acgggcaggc ggtcgccttt gcggctcgcc tgctgggtat
     8461 ccgggcagtc gtcgtcatgc ccgagcgcgc accagccatc aaggtcgagg gcgtcaggcg
     8521 ctacgggggc gaggttgtca tcgcgggaaa cagctcggca gaacggtggg agcgggcctg
     8581 tgcgctggct gaagaacgtg gcctggcaat ggtgccgccc tacgagagcc tggacgtcat
     8641 cgcaggccag gggacgtgcg ggctcgagat cctggaggag tggccggcgg ttgggacgat
     8701 cctggtcccg gttggagggg gcgggctcat tgcgggcatc gccgctgcgg tctcggccct
     8761 caagccgacg gtcagggtga tcggggtcga gccggtcggc gcgcccaagc tcgctcgggc
     8821 cctcgaggcg ggcaggccgg tcaagctcga ccggacggac agtctggccg acggcctgct
     8881 tcccctttcc attggcgagc tgccgttcgc ggtgctctcc ggggtggtac gcgagtccat
     8941 gctggtatcc gaggaagaga tcgcggcagc agtccggttc ctctcgcggg agatggggct
     9001 gtcgcccgaa ccttcgggtg cggtgacaac ggccgcgctt ctcggcggga gagcgccgat
     9061 ctcggggccg acagtggccg tggtcagcgg agggaacgtc gatcccgagc tgctgaaacg
     9121 tctggtggcc cccttcgacg agctcagggc aggctcttcg gcaagctcag ggcaggctta
     9181 aatgaccgtc gcgccgaaga tcctggtagc ggatgacgac caagcgctct cccggacgct
     9241 gtcctggatc ctgaaagaga acggatacga cgtcttcacc tctctcggtg gggagcacct
     9301 cttcgagcac ctcactgccg aacagttcga tcttctgctc ctcgacatca tgatgcccaa
     9361 ggtggacggg ttgcaactcc tgcagcgggt gaaggccgat ccccggttca aggatttgcc
     9421 cgtcctcatg atttcatcca tgcctccgga agaagccacg gtgcgctcgc tgggcctggg
     9481 ggccgccgac ttcataccca agccattccg ggttcgggag ctcctggcgc gggtgaaggc
     9541 ccacctgaga gtcggccgcg agctcaacca ggcccgcgcc gaggcacggt ctcgctccga
     9601 gatgatggac atcatgcagg aggtgaccgc ctcgctgaag ccggaagaga tctatgacat
     9661 cctggtgcgg cgggtcgcac agggtctcag catcgcacgc tgttccatca tcatagccgg
     9721 ccccgaagat gagacgggga tcgtcgtggc cgcctccgag aacccaaacc tccacaatct
     9781 gaaggtcgac ctcagacggt acccggagat ccggcacgcc ctggccaccg gcgagcgggt
     9841 gttggtgcgg gacgtccaaa ccgatccgct gtaccgggga gttcgggacg catgggaagc
     9901 cgagggtcgg ccggtagaaa cccgctcggc cgtggcgcta cgcttctcgc tccggcagca
     9961 gcctgccggt gtgttctttc tccgaaccac cagtgaggac gctccgctca acgagcacga
    10021 tgtccagttc gcggaggagg tgatcaatgc cgccgtcgcg gcgctggagc gggcgtatga
    10081 cctggagaac gcggtgctgg gtcaggagca gatgcggcac ctcgccgaga ccgatccgct
    10141 gaccaactgc ttcaaccggc gggcgttgat ggaaaaactg gagcaggaga tggatcgcgc
    10201 ggcccggtac gccaccatgc tcacgggcat gatggtggat atcgacaact tcaagcagat
    10261 caacgatacc tacggccatc tggtgggcga ccgggtgctg aagcagctgg ccaacctgct
    10321 gaagcgggag cagcgttcgg tcgacatcgt ggcgcgctac ggtggcgagg agttcgtcgt
    10381 cctgcttccc gagacgacca acgcggagtc tcgcaacttc gccgagcgga ttcttcgccg
    10441 ggtgtccacc cacgacttcg gtgaggcagg caaagcggtc cgcgtgacca tcagcattgg
    10501 aatagcctcc taccccgacg aacgggtgag cgatggcgag tcgcttctcc gcctggcgga
    10561 tacccacctc tatcgggcca agaacgacgg ccggaatcgg ttcagcgatt gagcaatcgg
    10621 cgttgcccac gctgtcaatc ggtatacgca gcccccgcac ggttctgcgt caaggatgga
    10681 tcgcttctgg tagaaggtga cgttgtcacg agcacggccg gtcccgctgg tcaaccggga
    10741 tcccgatcga ggtcccgcga ttcagccgac ggtgtgccgc cgctcgagtg ggaggcggaa
    10801 cgtgccctcc aggacaagct caccgcgcga gtggcatcac tcaccggtca ggtactggac
    10861 cagcgttatc agattgcccg taagctgggc gagggtggga tgtcgtacgt atatcaggcc
    10921 ctcgagatcg gcaccggacg gcccgtcgcg gtcaagatct tgatccccaa gctttctcgc
    10981 gatcctgcct ccgtcgaacg tctccggcgg gaggcgacca tcgccacccg gctgaaccat
    11041 cccaacgtct gtccaatcct acggctgggc gagacctccg accgactgct ctacctggtg
    11101 atgccctatc tggagggcga gccgctcagc gagcacgaga cccgccgagg gccctttccg
    11161 gtcgccgaag ggattccgct gttggtgcag gtatgccagg gactgggtca tgcccacgat
    11221 ctccagatca ttcaccgaga tctgaagccg gaaaacgtca tgctcgtacc ggatccagat
    11281 accccaacgg ggcttcgggc agtcgtgatg gacttcggcc tggccaagga gcgccgggcg
    11341 ggccctgacg tcgtgaagct gacggccacc gggatcgtgc tcggcacccc ggagttcatg
    11401 agtcccgaac agatacgggg gaagccgctc gacggacgca gcgatgtcta cgctctggcg
    11461 attctcgcct tcgagctgtt cacgggccag ctgcccttca ccggaaaaag cgcgcaggag
    11521 actatgattg ctcggctcag aggagctccg ctccggcttc gggatgccaa gcccgacctg
    11581 ccggccaagc tcgaggctgt catcaccaag gccctggccg tgaatccggc ggaacgctac
    11641 ggttcgatga acgagttggg gcacgcattc gagtcggtgg tgagtcccgg agtgctgggc
    11701 aggctgttcg ggagatagaa cgggaaagcc cgggcaagcg gttcattgga gtagtgcttc
    11761 agatgcaggc gggaggtgtg catatgagac aaaccttact gttgctgacg gcggtgttct
    11821 gcgctgcgtg cagccgcgag agaacgggca atacgtccgc ctcggcttat accccagact
    11881 cggacagcag cgtcaaagcc gcgggtgttg agggtacgaa cagcggctcg gaactggagg
    11941 cgccaaggct cattccagcc atccagaacc agctgaatct catggcctct ggagggcagc
    12001 ccaccgatcc ggagaacctc acggcgtaca agaacctcgc tggggatgtt gtcaactcca
    12061 tggctgccga tctccaccgc gctggtctgg cggattcggg agagttcagg gtgctcaggg
    12121 attcggtgat gaaggatctt ggaggaggag cgggaactga gagcaagttg gaccgctcga
    12181 agctgaccga acacattccg cgaatgcggc gcctgatctc gatgtatcag caggcgatga
    12241 gggcggcggg caacccgcaa taaaccgcag ccagtggatc aggaagcggc gagccgccga
    12301 aaccggcgca taaaggcacg atcgattcgg tccttcaggc gcatgaccca ccgcccggtg
    12361 agcgccatcg agccatagga caaaatggcc cggccgtccc cggtgttgat aagaacaagg
    12421 gaccgtggct gtggccggta atgctggagg tggtcgctgg ccaggcccct gagcgccagg
    12481 gcaaggtttc gagcgagtac cggtccttgc cgcacggcat agacacccga ctttggcgtc
    12541 gcaggaaatg gccgcagggt ggctgcgtcg ccggcggcaa agatggccga gctggttacg
    12601 gaccggagcg tgctgtccac cagcaagaac ccggcattgt cggtctccag gcccgatgcg
    12661 cgaaagatct cgggggcgct cgtaccggtg gcccaaacca atgtgtcgta cggtagttca
    12721 gtcctgccgc ccagacgaac cgtcctgctg cctacctccc ctacccgcat acccaagatg
    12781 acctgtacct ggttctgccc aagaacccgg gcagcctctc gagcgcatgc ttccgaacga
    12841 ttggcgacga ggcgttgctg ctcgtccacc agcacgacgt gggcacctgt ccggcccaag
    12901 gcctgaaagc gggccttgat gttgagcgcg agctcgatac ctcctgcccc tccgcccaca
    12961 accaccacag ttggctctgc ttgcggcaac ctgtccacag cctcggcgat cctgccggcc
    13021 ccatcaatgg gcttgaccga taggactgcg tctctgtcct gcgtcttcgc ccgctctatt
    13081 cccgagccga tggcaaatga cgcgatgtga taggggagct gccggccgcc atccacagtg
    13141 atccgccggt tagcggggtc tacgcgtacc gcggagccga gcacaaatcg agcacctgct
    13201 ttggcggcga gcgatggaag atccaggtag gcatcctctc gcccgtagcg cccggttata
    13261 agccctccga gcatgccgga gtaaaggtga gcagcatggg gcgagaggag agttgcctcg
    13321 gcccgtggaa agtgcccgag ggccagctgc tccagtacga atagatgggc gtggcccgcc
    13381 ccaaccaata caagccgctg ggtggactcc tgaaggtctg ccatgggccg atgacccctg
    13441 tcaatttggc cgtttcgggg cccctgtggc tggcacgcgt ggtgctgccg gggccgtcga
    13501 gcaggtgctc aacctaaatc tcactccgtg aggagtgtcg ttacaggagg aaatcatggt
    13561 agcaatcact cggcgcgaaa ccacaccaaa cctgttcgga ctgcagcggc tcaaccggat
    13621 tctggacgag gccttcgccg gcctcccatt tccggagcag ggcggcaaca tcctgacggc
    13681 caattgggtg cccgcgacgg acatctctga ggatgcgaac accatccagg tcaccatgga
    13741 gctcgccggg gtggagccgg acgatgttcg gatctcgctg gagaacaatg tcctcaccgt
    13801 ccgtggggag aagcggcagg aagaggagga gaatgacgat cgggtgtacc gcgtggagcg
    13861 catctacgga atgttccagc ggacgttcgt gctaccgaac accgtggagc ccgagcggat
    13921 cgaggcgcag tacgagaatg gcgtactcag agtgcgcatc cccaaggccg aacgggcgcg
    13981 gcctcgtgag atcccggtca atttctcggc atcaggcgct tccaaggtca agaccactgg
    14041 ccaatcacag ggagctgtgg ggcagggctc tcaggctact gggggccaga ccactcaagg
    14101 cactgagact cctgccggga acggcggtga gcagcagacc agttcctccc gccgtgcgca
    14161 gggctcccgg agcggaacgg agggctctcg gggtagtcgg cgctaggcag tgctgcgctc
    14221 agtcctggta gagcaccccc ctggcaatcc aggggggtct ttgctccgta gttctacgga
    14281 agacggcttc cgcaggaacg cggattgtga ctgctttcgc tgcgccctac ccttgtagcg
    14341 tgctgcccga cctttccttc catgtcattg ggataagcca ccatacggcg cgggtggacg
    14401 agcgcgagcg cttcgcgctt acccacggcg aaacagtcgc attattgagg gagcaacagg
    14461 aggcagggcg gtccgccctc ctgctctcga cctgcaatcg ctgcgagtac tactggagcg
    14521 gtagcgaaga cggcgaagcg tggctacgcc gtctggcgca gactcgtggc gcagccccct
    14581 ataccgtgtt cacccgccat gatggcgagg cagccgttcg tcatcttttc atcgtggccg
    14641 cgggactcga ctcgcaagtt ctcggtgaga ccgagatcct gggacaggtt cgccgggcgt
    14701 atgacgctgc ccgtgcagcg ggtaccacga cccgggacat ggacctcatt ctgtccggag
    14761 cactggcagc gggccggcgc gtaagacgcg agacggtgct cggccgccat ccggcctccg
    14821 taagctcggc tgctgttgat ctgatggcgg agcagtgggg catcatcggg tcacgaggag
    14881 tcgtggtgct cggtgcgggc gaggcagccg aagggatcct ccgggcgctc tccgagcgag
    14941 gggccacgaa cattgcatta ttgaaccgcc atccggagcg tgcccaggtg ctagccgagg
    15001 catggggcgc cacggcggga gacctgatcc agctggagca gaagctcgaa gcggccgacc
    15061 tcctggttgt ggccacagct tccgctcatc cggtggtaac cagcgcggag ctggctcgcg
    15121 tggtggcccg ccgggggaat cgagagcttt tcgtggttga tctgggagtg cctcggaacg
    15181 tcgatcctgc ggcccgggcc atggctgccg tgcagctgtt cgatttggac gacctccagc
    15241 gtctctgctg tccagccgcg ggaacggcac ccgccgctct agccgatgcc gagcgggtca
    15301 tcgacgacga gcttgcccga cttggactca gcttgcgatc ccgggttgtc gccccaaggc
    15361 tggcggagct ccaccgaatc ggtgtggaga tggcggagca ggaatcggca tgggcgctgg
    15421 cccagctcga aagcctttcc gatcgtcagc gcgagatcgt gaggcagatg gccgatcgtc
    15481 tgatccgccg cgtgttatat ccggtcagcc ggacccttag gactgagcag gatcctgccg
    15541 gtaatgtcat tccgggcgaa gtgaagaatc taggcagcag cttccgggag ccgccgagct
    15601 agattcctcg gtctcttccg cttcctcgga atgacagttg gcttatctcc cgcctaacct
    15661 ggccgagcgc cccaccggat tcaggatgtt ccggcactgc ggattggtgc agccggcaca
    15721 acgtgtgagg tactggcttg agtggatggt tcccgacttc agatggtcgc ggaccatctc
    15781 cgccagcgcg tcgagaaacc gaggacgatc gttcagggcc ggggcgcggc gatagtgcgt
    15841 gattccggct tcgtgggcta cctctccata ctcccgatcc agctccgata gagtttcaat
    15901 gtggtcgctg gtgaaggcga tcgggaccac gagcacgtgt ttctgaccgc gcgcgcccag
    15961 ccgccggagg acctgcgccg tgctcggccc cagccatcgc accggcccca catccgactg
    16021 atacgccaga atgtagggat tggaggcgcc gaggcgttcg accacccgct gcacgctggc
    16081 cccaacctcc tgaggatacg agtctccccg ctcgatgaca tcgagcggca gcgaatgtgc
    16141 gctgaacagg atcagcgcct tctcgcgatc ggccggggcg aactggccca gaccgtcgcg
    16201 cacagtctcg gtcatcgctt cgatgaagcc gggatgcacc ggccagcggt cgataatgct
    16261 ccattggaag gcgtctcgga gtcccgttcg ggatgcggca cgccagagct cgttgaggct
    16321 cgaaccggtc gtgctacagg agaactgagg gtactgggta aaagccacgg cgcgctccac
    16381 cccgtcggcc cgcatcatct gcagagcgtc gtcactactc ggacgggtgt agcggaaagc
    16441 gatgtagaac cggtggggtg ccgtttccgg agatagccgg tccagccggg caaccatgcc
    16501 gcgcccctgg gcctcggtat agcggagaat gggcgacccc ccgccgatgg cagcgtagag
    16561 accccggact ctgggcgtgc gccgtcgcgc gatgaagggc ccgagccacc gctgaaatgg
    16621 cagctggacg atctcccgat cggcaaacag tttcagcagg aacggctcca catcatccag
    16681 agttgccggc ccacccagat tgagcatcac gatcccggtc ctgggtttgc cggatcctgc
    16741 tccagacact gacgccggcg gtgagagggg ttggagatgg gtcatgcgcc aaacataatc
    16801 atcgctaggg ctccacgatc ccggcgccga gcgcgaaacg ggtaagctcc gcgacggttc
    16861 tgatctgcag cttcttcatg agactttccc ggtgggtctc caccgtgcga tagctgatcc
    16921 cgagctccgc cgcgatctcc ttgttggtcc gaccccgggc gatcccctcg agcacttcgc
    16981 gctcgcgccc ggtgagctgc tccagggggg cggccggggt ctcgtgctcg ccgcggaccg
    17041 cagcgctcag ccggcttgcc accggcgggc tgaagtagga ctctccccgg cagatggcgc
    17101 ggatggcgct ccgaagctcg gtggcggcgg tgtccttgag gagatagccg tgagcgccgg
    17161 cacggacgct ctcgagcacg tattcggcgt tgtcatgcat gctcagaatg agcacgcgcg
    17221 gcggagacga gacggtcccc agacgggttg cgatctgcag accagactcc cccggcatcg
    17281 aaatgtcgag caccaccacg tcgggatgga gctcctccgc cagctcgaag gcctccgttc
    17341 cattggaggc ttcaccgaca acgtcgaatc caggctcgcc ttccaggacg tgtcggattc
    17401 cggtccggac gatggtgtga tcgtcggcca ccaggacgcg gatggggcgg tcggtcacta
    17461 ttctacgccg ctgtccgtcg ccgggaccag cacctccagc agcgcaccag ctccctcctt
    17521 ccggcgaata cacacggtgc cgcccagggc cgtgatacgc tcgcgcatgc ccgccaggcc
    17581 catgtgcccc tcgagctcga gtctctccgt cgtcattccg agcggcaggc cacggccatc
    17641 atcgctgacc tgtaagagca ctccagcggc gctgatcgag atcccgatgt ctaccgagcg
    17701 cgcgtgagca tggcgcagca cattggaaag cgcttcctgg agagcacgaa agagggccaa
    17761 ctcggcttcg cgcgagagtg gtggcagggc ggtggggacc gcgagcccgg tccgaattcc
    17821 gcttcgctcg ctgaagtcgg ccaccagcga gcgcaaggcc gggagaagtc ccagatcgtc
    17881 caggagcgat ggccgaagat cgttggtgac gctgcggata ctgcgaatac cggtgtcgat
    17941 cagccccagg atttgatcca gacgaggcgc gttatcgggt tgtactctgt cacgcagcag
    18001 gccaagctcc atcttcacga ccgagaagac ctgcgccgtt tcgtcgtgga gctctcggga
    18061 gagtcggccg cgttcttcct cgtgctgctc gatcattcgg gcggacagcc gggcgagctc
    18121 gaccgtccga gtctcgagcc ggctgtacag atcggcgttc tccaacgcgg ctcccacctg
    18181 atgaccgagc gcgagcagaa acttgtcgtc cagcgcggta aacgggtcgc gtgcatcacc
    18241 gacgaggacc agcgcggcta tgaccgcatc gccgcggaaa atcggcagga cggcggcgta
    18301 ggcataggtg ccatggccgg gctcggcatc gaacccgtct ccggtgaatt gcggtcgccc
    18361 ggtctcgatc acccgggcaa gcaccgaggc agcgggcggt cggagcgctc cggccgtcca
    18421 gcgggcgcag acaccggcac cacggaccag gctgccgctc gatccctcga tcgagaacag
    18481 cgcggtgccc cggaccgcgg ccaggctcag cggccgggcg agcagggcgt cgagcacatc
    18541 ctgctgccgc ccggcgcgct gcaggtcgcc cgacaacgcg gagagggcgc cgagcccgcg
    18601 gcggagatcg tcgagcacga gaagcaggat accggtgcca acggcaaggg ccagcaggat
    18661 atcgagataa tatccccagg gcgcccaggc accgcgggca cgaaggaagg ggtagtccag
    18721 gtgatgcagc ccccagaggc caaacgctgc cgccaggagc gtggcaccgc tggacgccac
    18781 cctctgccgg taccgaaaga agacccaccc ggtccagagg gtggccaggc tgagaaacaa
    18841 cacggctggt cccgcggccc acaggaaatg cttcagccga taaatggcga cgtaggacca
    18901 gaccggcgga aagagcacca gcgccagata ccaccagcgc cagcggaccc gctgagagaa
    18961 gaccagtgcg gcatagagca gggccagggc ggtccaacca gtcactacct ggtgccagta
    19021 tagccagatc cgatgcgatg tgaggaggaa actggtaatt gccgcgatcc gtaggaaata
    19081 cagtccccac gcgccggccc accaggcaaa gtacggcttc cggtagcgag catagagaaa
    19141 ggcgcagagc gccgcgagcg ccgcggtaat ggccgcctga aggagagcgg cgtcgagctc
    19201 tacggcgttg gccagggggg tgccttgcat ggttcgaaac aaacggggaa aatcagggct
    19261 gcgcaacagc acctaactcg cctggaggtc caatgcttcg ctcgtcgggt ctgtctccca
    19321 tccttgtcgc cgctgggctc ctggccgcct gtcaaggccg aaccgagaat gggggtggtg
    19381 actggagtcg cttcgcgtcc ggattcatcg aaacctattt cgaggccaat cccctgttcg
    19441 ccacctatca gggccggcac gaatacgatg gtctcttccc tgattggagt gaggccggcc
    19501 tcacgcgctg gatgcgccgg ctacatcagc tccgcgacag tgccgcggca tttccaatcg
    19561 acagctcgaa tacgtcagca cgcttcgagc aggagtacgt gatcgctgtt attgatcgcg
    19621 atctattctg gggcgagcgc gccgatctgc ctcatcggaa tccggagttt tacaccgggg
    19681 gactcgatcc aaacgtgtac ctcgccaggg agtatgctcc gctgcccgag cgcatgcgtg
    19741 cgtttaccag gtacgccacc aaccttccag ccgcgctggc ccatgcccgc agcaacctgc
    19801 gtactcccat gccgaaggcc tatgccaaga tcgggcaggg ccggatcacg gggctggcgg
    19861 aatatctgga ggggagtgtg ccagcggttt tcgcttcggt cagcgacaca acgcttcaac
    19921 gccagttcgc cacggccaat gccggggcgg cgcaggcgct gcgggagctg agtgcctggt
    19981 tcggtcagca ggagaaacgc ggcaccgaca atttcccact aggtcccgaa cgcttcagcg
    20041 agatgctgcg ctcgacagag ggcgtagacc tcccgctcga ctcgctggag cgtcgcggtc
    20101 gagaggacat gaaccggaac ctggtcgctc tcaaggaggc ctgcgggcgt tacgcaccgg
    20161 gtcagtcgat ccagcggtgt gtagcccgga tgaacgccca caaggcaccc ggaagtccgg
    20221 tccaggctgc tatgcagcaa ctggatacac tcgaggcgtt cgtgcgcacc aagaacctgg
    20281 tatccgtgcc gggctccgag cgtgcgctgg ttcgcgagtc acccccctac cagcgcttca
    20341 acttcgcgta catcgacata ccgggtccct acgagaagaa cctgccctcg atctactata
    20401 tctcgccgcc ggatccggca tggccgaaag ccgagcagga ggcctatgtc cccggcgctg
    20461 cggatcttct cttcaccagt gtgcacgagg tatggcccgg ccatttcctc aacttcctcc
    20521 actccaaccg ggcaaagtcg aaattcggcc aggtattcgt ggggtatgcc ttcgcggaag
    20581 gatgggcgca ctacgccgaa gagatgatgt gggaagccgg gctcggcaac ggagaccccg
    20641 agacccacat tggtcagctg atgaatgcgc tccttcgtaa cgcccgctac ctctccgcga
    20701 tcgggctgca caccaaggga atgacaatag cggaatcgga gcgtctcttc cgggagcagg
    20761 cgtaccagga cccgggcaac gcccggcagc aagccgcgcg gggcacctac gatccagcct
    20821 acctgaacta cacgctgggc aagctaatga ttcgccagct acgcgaggat tggaccagtt
    20881 cccggggagg gagggatgcc tggcacgatt ttcatgatcg gttcctctcg tatggaggac
    20941 caccgatccc gctggtccgc cgggcgatgg tcggggcggg gcctgcgctc tagtccagag
    21001 ctgccgatca agaggcctgc accagcttct tggctaaggc tccgccggtg ggaagcaccg
    21061 agcggtaaat gtcgatcaat cgctgagtca ggaggcgctc atccagatgc ttcatggcac
    21121 tgcggccatc gatccgggag ccccggcgga gcacacgttc caaggccgcc gctatgctct
    21181 cggcgtgatc gtccgggcac agctcgcagc cggaaatccc gcgaagccga gcgggcacat
    21241 cgcccacccg cacggaaacc acaggcaggt tgcaggcgag ggcctccttg accgcgttgg
    21301 gcgatccctc ctgcatcgac gtgcacacca gcacatcgca cgcactcatc agcgcggcaa
    21361 tctccgggtg gggcaactcc cacccgacga tcagtctggt cggaatcgag cgattgacga
    21421 tgtcgacggc tcgctgggcc agggcgaaac gcttccgggc cagcaccgga ttgcccacga
    21481 acaggatcag gcgctgctct tccgccagcc cgagccggcg gcgggcttcg gcgcggggct
    21541 cgggacggaa cagctcgagg tcgattccgg agggcaggac gtgggccgcc accgacccgg
    21601 gcaggtaccg cttcatgtgc tcggaaacaa caatggcggc gtccgcctgc cgcgccacga
    21661 cccgggaaat gcaccggagc agccagcccg ccgggatata gcggccattt tccccgaaga
    21721 tcccttcgag atcgtcgccc cggaacgtca ccaccagcgg tatgcgcttg gggagcgcgg
    21781 tgagcccgct ctggccgaac tgggcatgca ccagatcgta cgacccgccg ttcagccgcc
    21841 ggcgtacttc ccaccaggcc agcgcatagt tctgcggtcg ccgagctccc cggaacggga
    21901 acaggtcgac atctactccc tcccgccgca ggaactcaac ctgctgcgcg atgaagaccg
    21961 ccggcccgcc tccgctgttc cacggccagt cgctcgtcac catcaagacg cgaatgcggg
    22021 ggcccatgcg ggtcctcacc gagaaagctg gagcgtcccc gggtgtggcg cgccacggac
    22081 gacgagatga tcgcggatgc cccgcaggca gccgctccca tagctgaagt gcagaacggg
    22141 gaacacgagg atcagggcgg cggcgcaacg gaggccatgc gagtgggccg cgcgggcggc
    22201 gaagagggcg acgagcagag cgtagcttcc agccaccagt gcgaagaggt aacgcgccac
    22261 cggaatccac aacgcgagcg cggccgagct cgacagacag cccaccaggg cggcaggaat
    22321 cacctggcgg acggtcagtt cccggcccac cttccgtgcc accaggggct tgaagtagcc
    22381 atgctggtaa tacatgcggg cgagctggcg gaaggagctg cgcgcgaagt aacggcagag
    22441 aacatccgga agcaggagca cccgacctcc ccgcgtgatc agcctgacat tgaactcgtc
    22501 gtcctggtgg cggatcagct cctcgtcgaa catgccgatg cgatcgaaga tttccctgcg
    22561 gtagcagccg aacggcaccg tgtctacctc ccgccgctcg ccggtgccgg ctgaaaagta
    22621 cgagttgccc atcccgaaat aatgcgacat gccaacggcg atcgcctgag cggtcggcga
    22681 gtcgtcggcc ggcactgtca cgagagttcc gcccacgttg tcggcaccgc tttcctggag
    22741 gcctgcgacc agccgggaga cgtagtcaga ggggtatagc acgtgggcgt ccatccgaat
    22801 cacgatgtca ccggatgcgg cccgaatagc gacgttgagt ccggcgggag tggtgcctcg
    22861 aggattgtcc aacagaacta tcgtcggatg cagtgcaacg tagcggacca gaagtggccg
    22921 cgtcccgtcg ctgctcccac catcagccac caggatctcc aggcgttccc gtgggtagtc
    22981 gctggccagg actgaatcga ggcagcgcgc gatgtaccgc tcctcgttcc ggcatgggat
    23041 aacaatcgaa accagcggcg gcacccgtcg gcggctcacc aggtgagccc cactctcgga
    23101 ccgcgacgga tggcgttctg ctgcatcgat agttccggcc gttgtttccg gaacggcttg
    23161 caggcctcct tgatctggtc catcaagcga atattgagca cgccctcctc cggcggaacc
    23221 ggcgggggca ggccctcacg cagagattga tagaaccgct cgatgatcgt gcggagtccc
    23281 tgatggcgct tcaccttgcc ggttgcgatg ccgaggagtg tgccgatccc ggaacgaatg
    23341 agatccagcg cggcaagaag actcccggta aaccgtgcca gggccgaagg gagtccgcta
    23401 tctcggtagg tcgataccgt catcgtctgc cagtcggcgg tcactcgccc tccggttccc
    23461 aggatctcga tgcggctcac ctccggcgcg ctgcacaggg agaaggacac ctccccaagg
    23521 ccggtgtccg aggggatcag cactcgaagc tcctccatcc cggcctccct gacgatgccc
    23581 agatcgagac cgacgacccg tggcaggccg ggatccgtca ggaagcggca ggccagatag
    23641 agcgggtggc agatgagatt gtcgaatgtt cgccaatcgt ccgagtagct ccagggaatc
    23701 gacgccgatc gcgcgagcgc ttcgtaggtg aagccctgtt ccgcccgtac cgagatcacc
    23761 cggccgatgt cgccgacccg aatgcggcgg cacgcctcca cgaagacggg atcgaacagc
    23821 ctgctgtggc cggggcacac ctgaacgcct gcctcgcgcg ccaactccag gatggctcgc
    23881 gcttcggcct ggatgccggc aaagggcggt tcgatgtaca tgtgcgcccc gtacttcgct
    23941 gcgaggcgag cgagtgggag gtggctctcc ggcggggtca gcagatgcac cgcatcgggt
    24001 cgcctctcgc gtagcatggc ctctgcgtcg ctatagcatc cccgaatccc atggcgcgtc
    24061 gccgcctcac gggcggcttt ctcgtcgagg tcgcagacgg cgacgatctc gacattgcgg
    24121 atcgccgtga gcgcggccac gtggtgcacg ctgatgcgtc cgcaacccac cagggccacg
    24181 cgcaaacgta ggggctcagt ggttccgact tcaggagcca ttgtgtgccg cggacgagcc
    24241 cgtcgccagc gacattcccg catcggtgcc ccgccggcct ccgacccgcg ccgtcttccg
    24301 gcggcaggtc agtccctgcc gccggtcgct gacccgcagg tccggcggaa gcgggtgacc
    24361 ctggacgcca cgcctccgct cccgccaact cacgtggctg gggtcgagga gagtccccca
    24421 ttggccggcg tcgccaccgt tgacgcgagg ccccccggtc accgcggcac atgagtcctg
    24481 gagcggcggc acgcactccg gtaccagctc acacagggtg gcgagcagcc cgtctcgatc
    24541 gcccgcatcc aggtaggcca acagccggct gaggttctgg accagctggg gcccggcgct
    24601 ctcggttgtc tgactgatgc ggatcttttc gctggaagtg ggtacgccgg cctcgagggc
    24661 ggagacctgc tcctcgatca gcttctcacc gggtctcaat ccggtgaaca cgatacgaac
    24721 gtcctttccc ggtaccctcc ccgagaaccg gatcagcttc tcggccagat ccagaatgcg
    24781 gaccggctcg cccatctcca gcatggcgat gccgccggcc gtctccggca
//
LOCUS       DASYRV010000482         3150 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_407036, whole genome shotgun sequence.
ACCESSION   DASYRV010000482 DASYRV010000000
VERSION     DASYRV010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3150
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_407036"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..436
                     /gene="msrB"
                     /locus_tag="VGQ24_13000"
     CDS             <1..436
                     /gene="msrB"
                     /locus_tag="VGQ24_13000"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEV8455810.1"
                     /translation="SARVVKTDAEWRAQLTEAQFRIARGKDTERPFCGTLLDNKFEGV
                     YSCVCCGLPLFSSGSKFNSGTGWPSFFQAVASENVATEEDRAYGMARTEILCARCDAH
                     LGHVFNDGPPPSGLRYCVNSESLVFTGREDLASLADPAAGER"
     gene            450..1193
                     /locus_tag="VGQ24_13005"
     CDS             450..1193
                     /locus_tag="VGQ24_13005"
                     /inference="COORDINATES: protein motif:HMM:NF021371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2071 domain-containing protein"
                     /protein_id="HEV8455811.1"
                     /translation="MLVHPSLQHLSHRPWPIPTRPWTLRQVWHDLLFLHWPVPAAILR
                     TLVPPALEIQEFSGSAWLAVTPFWMSDIGFRRWRFPGGLSRFGELNIRTYVSRADRPG
                     VWFFSLDAGSRLGALVGRWLYGLPYVHARIQQGQVGEEVRFGSTRRGGIGFVARYGPT
                     GPPGTSHPGSLEHWLTERYCLYSQRSGELHRAEIHHRPWPLQPAAAVVTRNDLPGVHG
                     IALGGPPALLHFSRKLEVIVWSLERVIRR"
     gene            1300..1581
                     /locus_tag="VGQ24_13010"
     CDS             1300..1581
                     /locus_tag="VGQ24_13010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455812.1"
                     /translation="MIIKRVEPFSCAKLAGTLYAILGFLIGILFSLFALGGSGLMGTL
                     PFGGAMFGVGAIIILPLVYGCIGFVAMLIMASLFNLAAKWVGGLEIQVE"
     gene            1587..2108
                     /locus_tag="VGQ24_13015"
     CDS             1587..2108
                     /locus_tag="VGQ24_13015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455813.1"
                     /translation="MSGLWHPAAFAAICLLAGMLPVSAVAQRTPGPELSILAGPSPYH
                     LSKSGTGVAISAGLAFRPTQRVLVVEPGLGFFFFRNDFGQGSHWFFPEVSVQAEAGLG
                     SIRPFVGGGGGIGIEARIGSDRVVGTLHAVAGVRLRLATGWGARAEVRWRGVPPGSGH
                     TADFCFGFVRGIG"
     gene            complement(2144..2395)
                     /locus_tag="VGQ24_13020"
     CDS             complement(2144..2395)
                     /locus_tag="VGQ24_13020"
                     /inference="COORDINATES: protein motif:HMM:NF025614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPXCG motif-containing cysteine-rich protein"
                     /protein_id="HEV8455814.1"
                     /translation="MRHDREEDDRLDDEPSGSEDSEIATEAEVTCPYCGESVTIALDP
                     DGGLAQEYIEDCQVCCRPWRVHVSYDDEGSVEVSVEQAE"
     gene            2576..2869
                     /locus_tag="VGQ24_13025"
     CDS             2576..2869
                     /locus_tag="VGQ24_13025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HEV8455815.1"
                     /translation="MDASIAESADFAKPILERIRQTVLPACPEVQEAMKCERNVKARA
                     AFQGFSPRHQREYLEWITEAKGEATRTRRLATAVDWIAEGKPRHWKYLRQRSP"
     gene            2866..3084
                     /locus_tag="VGQ24_13030"
     CDS             2866..3084
                     /locus_tag="VGQ24_13030"
                     /inference="COORDINATES: protein motif:HMM:NF039472.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6494 family protein"
                     /protein_id="HEV8455816.1"
                     /translation="MNEEIFNLELRKFLKRFGITSQREIEKAVALALASGSLTGGEVL
                     PVRATLKIPGVLDEVHIDGEIALDGATS"
BASE COUNT          485 a         1023 c         1043 g          599 t
ORIGIN      
        1 atcggctcgc gtcgtcaaga ccgacgcgga atggagggct cagctcaccg aggcacagtt
       61 ccggatcgct cgcgggaagg acaccgagcg ccccttctgc ggcaccctgc tcgacaacaa
      121 gttcgagggg gtctactcct gcgtctgctg cggtctgccg ctcttcagct cggggtcgaa
      181 attcaattcc ggcaccgggt ggcccagttt ctttcaggca gtcgcgagcg agaacgtggc
      241 caccgaggaa gaccgggcct acggtatggc gaggaccgag atcctctgcg cgcgctgcga
      301 tgcgcacctc ggtcacgtct tcaatgatgg tcccccgcca agcgggctgc gctactgcgt
      361 gaactcggag tcactggtgt ttaccggccg ggaggatttg gcgagcctgg cggaccccgc
      421 cgccggcgag cgctagactc cgaacgggcg tgttggtcca tccgtcgctg cagcacctct
      481 cgcaccgtcc ctggcccatc cccacccgac cgtggaccct gcggcaggtc tggcacgacc
      541 tgctctttct gcactggccg gtgcctgccg cgattctgcg taccctcgta ccgccggccc
      601 tcgagatcca ggaattctca ggcagcgcat ggctggccgt gacgccgttc tggatgtccg
      661 acattggctt ccgccgctgg cggtttccgg gcgggctttc ccggttcggc gagctgaaca
      721 tccgcaccta cgtgagccgc gcagatcgcc cgggcgtctg gttcttcagt ctcgatgcgg
      781 gtagccgcct gggagcgctg gtgggacgct ggctgtacgg actcccctac gttcatgccc
      841 gcattcagca ggggcaggtg ggagaggagg tccgctttgg ctcgacgcgg cgggggggca
      901 tcggcttcgt ggcacgctat ggcccgaccg gtccccccgg gaccagccac cccggcagcc
      961 tggagcactg gctgaccgag cgctattgcc tgtattccca gcggagcggg gaactccatc
     1021 gcgcggagat tcatcaccga ccctggccgc tccagccggc cgcggcggtg gttactcgta
     1081 acgacctgcc cggcgtccac gggattgcac tcggcgggcc cccggccctg ctgcacttct
     1141 cgcgaaagct ggaagtgatt gtctggtcgc tcgagcgcgt gatacggcgc taggggcatc
     1201 cggcttgcca gcggggcctt ccagcccgac attggtccca cgcagccccc gttaacacgg
     1261 atgcaggtgc cgttacccgc ttacccaagg gaggggtgca tgatcatcaa gcgagttgag
     1321 ccgttttcgt gcgcgaagct ggccggaacc ttgtacgcga ttctgggctt tctcatcggc
     1381 atcctcttct cgctcttcgc actcggtgga tccgggttga tgggaacgct gccgtttggc
     1441 ggggccatgt tcggggtcgg cgccatcatc attcttcctc tggtgtacgg ctgcatcggg
     1501 tttgtggcga tgctcatcat ggcgtcgctg ttcaatctgg cggccaagtg ggtcggcgga
     1561 ctcgagattc aggtggaata gcgacggtgt ccggtctatg gcacccggct gccttcgccg
     1621 cgatctgcct gctcgcgggg atgctgccgg tgtccgcggt ggcccagcgg accccaggac
     1681 cggagctctc gattctggct gggccctcgc cctaccacct ctcgaaaagc gggaccggcg
     1741 ttgcgatcag cgccggtctc gcctttcgtc ccacgcaacg cgtcttggtc gtcgagccag
     1801 gactgggttt tttcttcttc cgaaacgatt tcgggcaagg cagccattgg ttctttccgg
     1861 aggtcagcgt tcaggctgaa gccggactgg ggtcgatacg ccccttcgtc ggtggcggag
     1921 gcggtatcgg catcgaagcg cggatcggat cggaccgagt agtcggaacc cttcacgcgg
     1981 tcgccggcgt gcgcctccgg ctggcaacgg gttggggggc ccgggccgaa gtgcgctggc
     2041 ggggcgtgcc tccgggcagc gggcacaccg ccgatttctg cttcggcttc gtacggggga
     2101 ttgggtaagg acgggcagcc cgcgggagcg ggtctgccgt cgatcactcc gcctgctcga
     2161 ccgagacctc cacggacccc tcgtcgtcat aactcacgtg cacccgccag ggccgacagc
     2221 agacttggca atcctcgatg tactcctgag ccaggccccc atccgggtcg agcgcgatgg
     2281 tcacgctctc gccgcaatac gggcaggtta cctcagcttc ggtcgcgatc tcggagtctt
     2341 cgctcccgga cggttcgtcg tcgaggcggt cgtcctcctc tctatcgtgt ctcacggcat
     2401 cctcctgctg gttggacctc ttgacacccg accgccggag ccatcccttt ccggttcggc
     2461 gagactcagc ctcttggagg gtgcccggta tggggaacgc ggccagatgg gtcgggaaag
     2521 taatggaact ggcggcgcag ggcgggtcgc gctgatgggc tcccgggatg cgcgcgtgga
     2581 cgcctccatc gcagagtccg ccgactttgc caagccgatc ctcgagcgga ttcggcagac
     2641 ggttcttccg gcctgccctg aagtgcagga ggccatgaaa tgcgagcgga acgtcaaggc
     2701 acgtgccgcg tttcaagggt tcagtccccg tcatcagcgc gaatacctcg agtggattac
     2761 cgaagcgaag ggtgaggcga cccggacccg gcgcctcgcg accgcggtcg actggatcgc
     2821 cgaggggaaa ccgcgccact ggaaatacct gcgtcagagg tcaccatgaa cgaagagatt
     2881 ttcaacctcg agctgcgcaa gttcctgaag cggttcggca ttacctcgca gcgtgagatc
     2941 gagaaggccg tggcgctggc cctcgcgagc gggagtctca ccggcggcga ggtgctgccg
     3001 gtccgtgcca ccttgaagat ccccggcgtg ctggacgagg tgcatatcga cggcgaaatc
     3061 gccttggatg gagcgacttc atgattcgaa agctcaagtc cggccaatac cgactctact
     3121 cgcgcaagcc aaatccgaag accggcaagc
//
LOCUS       DASYRV010000483         3704 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3840590, whole genome shotgun sequence.
ACCESSION   DASYRV010000483 DASYRV010000000
VERSION     DASYRV010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3704
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3840590"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VGQ24_13035"
     CDS             complement(<1..214)
                     /locus_tag="VGQ24_13035"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog domain-containing protein"
                     /protein_id="HEV8455817.1"
                     /translation="MSYSVGQITTFVMPHMQNVRGDLFGGELMALVDQAAAVAAIRHA
                     GGPAVTASIERVDFRERIPVGALVTCL"
     gene            complement(452..2314)
                     /locus_tag="VGQ24_13040"
     CDS             complement(452..2314)
                     /locus_tag="VGQ24_13040"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HEV8455818.1"
                     /translation="MLRLAIAQVRPQKGAYEENLCRLGALFREVGSWPEPPELLVAPE
                     TALTGYFLEGGVRDLAISADQLFADLSRQHRDSGAPSLDVALGFYEVHGNRLYNSGLY
                     ATLGGSDAGIRHIHRKIFLPTYGVFDEERFVEAGRSVQAFDTRWGRAAILICEDAWHS
                     FTPMLAALDGAQLIIIPSASPARGVITTDDTAGRPVSLARWSRLVQDIAGEHGVYVAL
                     AQLVGFEGGKAFPGGSILAGPRGDILTHGPIFQEAVIPALIDFEEITRARVDLPLLAD
                     LEMRLPHLLGSLHAARKEKVVGARRASPEEPKRAPTGDTAPNIDRATGKGAARARATH
                     TSPLPPLAARFNPQQDPLAIDSELTQRWLVEFIRDEVQRRRKFEKVVVGLSGGVDSSL
                     VAFLAAEALGAANVIGIRMPYRSSSAESLAHAQLVIDALGIPSRTVEISAAVDALAGA
                     IGGEAEPARLGNIMARTRMITLFDLSAALRALPLGTGNKTERLFGYFTWHADDSPPVN
                     PIGDLFKTQVWVLARHLGVPDVIVSKPASADLITGQTDEGDFGISYPRADAILHWILL
                     GYRSPEIAALGFDEAEINLVRQRLDSTHWKRRLPTVAMLSGTAIGEYYLRPVDY"
     gene            2415..2804
                     /gene="crcB"
                     /locus_tag="VGQ24_13045"
     CDS             2415..2804
                     /gene="crcB"
                     /locus_tag="VGQ24_13045"
                     /inference="COORDINATES: protein motif:HMM:TIGR00494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:1903425 - fluoride transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:1903424 - fluoride transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEV8455819.1"
                     /translation="MLLYVALGSAIGGVSRYLIGGLVQRMLDTAFPAGTLLVNISGSF
                     LLGAIIRYALETPSLTPEIRAFLTIGVCGGYTTFSTFSYETVALLEDGQWARAGVYIT
                     ASVVLSLMGTWLGFALARQVIVWREHM"
     gene            2822..3169
                     /locus_tag="VGQ24_13050"
     CDS             2822..3169
                     /locus_tag="VGQ24_13050"
                     /inference="COORDINATES: protein motif:HMM:NF014677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF190 domain-containing protein"
                     /protein_id="HEV8455820.1"
                     /translation="MHGLTGERVLMRIHIGERDKHHGKPLYEAIVHLLRERHFAGATV
                     LRGIMGFGASAGIHTEKVLRLSLDLPLVVECVDTEEKIQAILPELDQMIGGGLITLER
                     ARVIIYRPEKGER"
     gene            3166..3648
                     /locus_tag="VGQ24_13055"
     CDS             3166..3648
                     /locus_tag="VGQ24_13055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455821.1"
                     /translation="MTLPTAFQAVSGVANACQILPNVITGGQPNAQQLRALNEAGGGI
                     ILDVRDPMESRPIDEPALVQQLGMEYVNIPVRAGSLDDATLDRILAVLRGAGERTVFF
                     HCGSGNRVGGALLPYFMLDQGMEEEDAVDQAMRVGLRSAEIMEWGLSYVRRNQTTGEP
                     "
BASE COUNT          692 a         1158 c         1198 g          656 t
ORIGIN      
        1 ccaagcaggt caccagcgcg ccgacgggta tacgctcccg gaagtccacc cgttcgatgc
       61 tcgcggttac cgccggtccg cccgcatgtc gaatcgccgc caccgcagcc gcctgatcca
      121 ccagcgccat gagctcgccg ccgaacaagt cgccccggac gttctgcatg tgcggcatca
      181 caaaggtggt gatctggccg accgagtagg acatgggacg ggattcaggc gtcattgacg
      241 tccaaaaaag cgtgagcggg aaaagaaaaa gcgtgagcgg tgagcgggtg ttgtcaccct
      301 gaggaagcgg agcgaccgag ggggccggag ctcaacttcc ttacaacttg ttcaggcacg
      361 ccaaaaggat tgatgcccaa ccgaagcttc ggtcccctcg gggcctgcgg gccctcaggg
      421 tgacaccgct acttatcctc ttcggtgaca ctcaataatc aaccggtctc agataatact
      481 cgccgatcgc cgtcccactc agcatggcga cggtggggag ccggcgtttc cagtgggtgg
      541 agtcgagccg ctgccggacc aggttgatct cggcctcgtc gaaacccagc gccgcgatct
      601 cgggcgacct gtatcccagc aggatccagt ggaggatggc gtctgcgcgg gggtaagaga
      661 ttccgaagtc tccttcgtcg gtctgacccg tgatgaggtc ggcactggcc ggcttggaga
      721 cgatgacgtc ggggacgccg agatgccggg ccaggaccca gacctgagtc ttaaacaggt
      781 ccccgatagg attgaccggt ggcgagtcgt cggcatgcca agtgaagtag ccgaacagac
      841 gttccgtctt gttgccggtg cccaacggca gtgcccgaag ggcagcggac agatcgaaca
      901 gggtgatcat cctggtgcga gccatgatgt ttcccagccg ggcaggctct gcctccccac
      961 caatcgcgcc ggccagggca tcgaccgccg cactgatctc cacggtgcga ctcgggatgc
     1021 cgagcgcatc gatcaccagc tgggcatggg ccaaactctc ggcgctcgaa gaccggtatg
     1081 gcatgcggat cccgatgacg ttcgccgccc ccagcgcttc ggcggctaga aaggcgacta
     1141 gcgagctgtc cacgccgcct gataacccga ccaccacctt ctcgaacttc cgccgccgct
     1201 gcacttcgtc ccggatgaac tccaccagcc agcgctgggt gagctcggaa tcgatggcga
     1261 gcggatcctg ctgggggttg aagcgggccg caagcggagg taagggtgac gtgtgcgtcg
     1321 cccgcgcgcg ggcagcaccc ttcccggtcg ctcgatcgat attcggagcc gtgtcaccgg
     1381 ttggggcacg cttgggctct tcgggcgagg cacgcctcgc ccctacaacc ttctccttgc
     1441 gagccgcatg caacgacccg agaaggtgag gcaacctcat ctcgagatca gcgagcaggg
     1501 gcagatcgac ccgcgctcgg gtgatctcct caaaatcgat cagcgcgggt atgaccgcct
     1561 cctggaaaat cgggccgtgg gttagaatgt caccgcgggg cccggccagg atggaaccgc
     1621 ccgggaacgc ctttccgcct tcaaagccca ccagttgtgc cagggcgacg tagacaccgt
     1681 gctcgcccgc gatgtcctgg accaggcgac tccagcgcgc cagactcacc ggacgcccgg
     1741 ccgtgtcgtc ggtagtgatt accccgcggg cgggactcgc gctggggatg atgatcagct
     1801 gggcgccgtc cagtgcggcg agcatagggg tgaacgagtg ccatgcatcc tcgcagatga
     1861 ggatcgcggc tcggccccac cgggtatcga atgcctgcac gctgcgtccg gcctcgacga
     1921 aacgttcttc gtcgaagaca ccgtaggtag ggaggaaaat cttccggtgg atgtggcgga
     1981 tgcctgcgtc ggacccaccc agcgtggcgt agaggccgga attgtaaagt cggtttccgt
     2041 gcacctcata aaaaccgagc gccacgtcga gtgacggggc accggagtcc cggtgctggc
     2101 ggctcagatc ggcaaagagc tggtcggccg atatggcgag atcccgcacc ccaccttcga
     2161 ggaagtaacc ggtgagcgcg gtctcaggag cgacgaggag ctcgggcggc tccggccagc
     2221 tcccgacctc acggaacagg gcgccaagcc ggcagaggtt ctcctcatac gcgcccttct
     2281 gcgggcggac ctgggcgatg gcgagacgga gcacgtctta aaggtaagag gtgagaggtg
     2341 agaagtgaga gggacgtggt ctgaggcttg aagcccccct ctcccctctc acctctcacc
     2401 tcttaccttt ggcaatgctc ctatatgtag cgctcggcag cgccatcggc ggggtcagcc
     2461 gttacctgat cggcggatta gtgcagcgga tgctcgacac cgccttccca gccggcaccc
     2521 tcctggtgaa catctccggc tcgttcctgc tcggcgcgat catcagatac gctcttgaga
     2581 ccccctccct caccccagag attcgggcct tcctgaccat cggggtctgc ggcggctaca
     2641 ccaccttctc cacgttcagc tacgagacgg tggcgctcct ggaagatggc cagtgggctc
     2701 gggcgggggt ttacatcacg gctagcgtcg ttctgtcgct catggggaca tggctcgggt
     2761 ttgctctcgc ccgccaggtg atcgtctggc gggaacacat gtagacgcgc acggggctct
     2821 gatgcacggt ctgactggcg aacgggtgct gatgcgcatc catatcggtg agcgggacaa
     2881 gcaccacggg aaaccgctgt acgaggctat cgtccacctc ctgcgcgagc gccactttgc
     2941 cggtgcgacg gtgctcaggg gtatcatggg attcggagcc agcgcgggaa tccacacgga
     3001 gaaggtgctc cggctttcgc tcgaccttcc gctcgtcgtg gagtgcgtcg acacggagga
     3061 gaagattcaa gccatactcc cggagctgga ccagatgatc ggtgggggcc tcatcacgtt
     3121 ggagcgggcc agagtcatca tctaccgccc ggagaaaggt gagaggtgac tttgccaaca
     3181 gcattccagg ccgtaagcgg tgtcgccaac gcttgccaga tactccccaa cgtgatcacc
     3241 ggcggccagc ccaacgcgca gcagctccgg gcactcaacg aggccggggg cggcattatc
     3301 ctcgacgtac gtgatcctat ggagtctcgg ccaattgacg agcctgctct ggtgcaacag
     3361 ctcggcatgg agtacgtgaa tatcccggta cgggcaggct cgctcgacga tgctacgctc
     3421 gaccggatcc tcgctgtgtt gcgcggagcc ggcgagcgga ccgtcttctt ccactgcggc
     3481 agtggcaacc gggtcggggg cgccctcctt ccctacttca tgctggatca gggtatggag
     3541 gaggaggatg cggtagatca ggccatgcgg gtcggtcttc gcagtgccga gatcatggaa
     3601 tgggggctga gctatgttcg acgaaaccag acgactggtg agccgtagtt tcatcagccg
     3661 taatgcttat gtcgttccgt ctctgaggca ccaatgcact cact
//
LOCUS       DASYRV010000484         3864 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2595380, whole genome shotgun sequence.
ACCESSION   DASYRV010000484 DASYRV010000000
VERSION     DASYRV010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3864
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2595380"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1127)
                     /locus_tag="VGQ24_13060"
     CDS             complement(<1..1127)
                     /locus_tag="VGQ24_13060"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: protein motif:HMM:NF014067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HEV8455822.1"
                     /translation="MATRTRTPQPTKRAKPAKSSSGSSFAESFPNSTKVYVDGPRGVR
                     VPMREISLSGGEPPLRVYDTSGPQGFDVREGLPGLRAAWLSERDVTLTPRETRGSGPE
                     GRGLRTAGVPAPSLPVASLRVGQGDTGLGGSLIPDSLQRAGYKGDGPITQLYYARKGE
                     ITEEMEYIALREGIPADYVRAEVARGRAIIPANINHPELEPMVIGRNFHVKINANIGN
                     SAVTSSIEEEVEKLRWATLWGADTVMDLSTGKQIHETREWIIRNSAVPIGTVPIYQAL
                     EKVGGVAEDLTWEIYRDTLIEQAEQGVDYFTVHAGVLLRYVPLTANRVTGIVSRGGSI
                     MAKWCLAHHKESFLYTRFRDICEIMAAYDVSFSLGDGLRPG"
     regulatory      complement(1174..1294)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(1371..2834)
                     /locus_tag="VGQ24_13065"
     CDS             complement(1371..2834)
                     /locus_tag="VGQ24_13065"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P N-terminal domain-containing
                     protein"
                     /protein_id="HEV8455823.1"
                     /translation="MIRTHLLCWVSTLALAPVLAAQVIAPAEYAARRDSLTANLDSGV
                     VVVAFGAPDPVSIGRWAQLPAFRYLTGFLEPNAALVLVKRGGAENGTLFTASRDPRRA
                     LYDGFPPDSAAVARQTGLAVRSLPALAPMVDSLVGLGLPVYDLRDFATWDAAGQDSLT
                     RGARFVADLVARHRGSGFEVRDAHPRLDSLRAIKSPAELAQLRRAISITVGSVKQAMR
                     SAKPGMWEYELEAMIEGGFRRAGADGPSFGSIVGSGPNSTQYHYEKNDRRMQAGDVVV
                     MDVGAAYRGYAGDVTRTIPVSGRFTAEQRAIYQLVRDAQAASERVAKPGASWEAWRDS
                     ARAVEARGLARLGLIESPGATFDPPWAEQCRTRPVSCTQAFLYMAHGLGHGIGLEVHD
                     PPRPYMGSGTFQVGNVFTIEPGVYISTRLLDMLPDTPKNRAMIAKVRPAVKRYQNIGV
                     RIEDDYLITPTGVEWLSKAPREIGEVEALRLVSSRTR"
     gene            3131..3853
                     /locus_tag="VGQ24_13070"
     CDS             3131..3853
                     /locus_tag="VGQ24_13070"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: protein motif:HMM:NF002537.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004604 - phosphoadenylyl-sulfate
                     reductase (thioredoxin) activity [Evidence IEA];
                     GO_process: GO:0019379 - sulfate assimilation,
                     phosphoadenylyl sulfate reduction by
                     phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HEV8455824.1"
                     /translation="MNVDIDDSTPTEQFIGWTMERFGNRRMVITTSFGMEGCALIDMY
                     ARQGAAVTVVYIDTGFFFPQTYALRDRMVSRYPMITFINRGTSLTPAAQEARYGPELW
                     RREPDRCCELRRVEPFQQALIGTDVWITAITRTQGSTRSDTPLVSWDWKYQVLKVCPL
                     ASWDRGRVWEYVKRHGVPYNELHERGYPSIGCTYCTTPVPGASPGQYSRAGRWAGTEK
                     TECGLHGIGKNKEFTPLSSSRA"
BASE COUNT          682 a         1292 c         1239 g          651 t
ORIGIN      
        1 ctcccgggcc gcagcccgtc ccccagggag aacgagacgt cgtaggccgc catgatctcg
       61 cagatgtcgc ggaaccgggt gtagaggaag ctctccttgt ggtgggcgag gcaccacttg
      121 gccatgatgg acccgccgcg ggagacgatg cccgtcaccc ggttggcggt gagcggcacg
      181 taacgcagca gcacaccggc gtgcacggtg aagtagtcca ccccctgctc ggcctgctcg
      241 atcaaggtgt cgcggtagat ctcccaggtc aggtcctccg ccaccccgcc caccttctcc
      301 agcgcctggt agatcggcac cgtgccgatc ggcacggcgg agttccggat gatccactca
      361 cgggtctcgt ggatctgctt tccggtcgag aggtccatca cggtgtcggc gccccagagc
      421 gtggcccacc ggagcttctc cacctcctct tcgatcgagg acgtcaccgc cgagttgccg
      481 atgttggcgt tgatcttcac gtggaagttg cggccgatga ccatcggctc cagctcggga
      541 tggttgatgt tggcgggaat gatcgcccgg ccccgcgcga cttcggctcg gacgtagtcc
      601 gcggggatcc cttctcgcag agcgatgtac tccatttcct cggtgatctc gcccttacgt
      661 gcgtagtaga gctgggtgat ggggccgtcg cccttgtagc ctgcgcgctg gagggagtcc
      721 ggaatgagcg agcctcccaa cccagtgtca ccctgaccga cccggagcga agcgacgggg
      781 agggaggggg ccggaacgcc ggctgttctc aaaccgcggc cttctggtcc actccccctc
      841 gtttcgcgag gggtcagggt gacatcacgc tctgacagcc atgctgctct caaaccaggc
      901 agcccctccc gcacatcaaa cccctgcggc ccgctggtgt cgtatacccg cagcggcggc
      961 tcgcctcccg agagcgagat ctcccgcatg gggacgcgca cgcctcgcgg cccgtcgacg
     1021 tacaccttcg tcgaattggg gaacgattca gcgaaagagc tcccggacga agacttcgcc
     1081 ggcttggctc gtttggttgg ctggggggtt ctggtgcggg tcgccatcgc aagtctccgt
     1141 gagtggcgta cgggaactag cgctagcgcg agggattcgc gggcgccgca ctcccttcgc
     1201 cggtatcagc cggatcaggt tccaagggtc gtcttctcaa tcgtgcttgg aggctagagt
     1261 gctggcgtcc accacgatgc ccctggcggc aaatgaacct taacgcgtcg aagccactcg
     1321 ggtcaaatga gagatgtcaa aactcaccac agaggcacgg agcgccacga tcaacgcgtt
     1381 cgggacgata ccagcctcaa agcctccact tccccaatct cccgcggagc cttcgacagc
     1441 cactccaccc cggtcggcgt gatcaggtag tcgtcctcga tccgtacccc gatattttga
     1501 taccgcttga ccgccggccg gaccttggcg atcatcgccc ggttcttcgg cgtgtctggc
     1561 agcatgtcga gcagcctggt gctgatgtag accccgggct cgatggtgaa gacgttcccc
     1621 acctggaagg tgccgctgcc catgtagggc cgaggcgggt catgcacctc gagcccgatg
     1681 ccgtgaccca gaccgtgagc catatacagg aacgcctggg tgcagctcac cggcctggtc
     1741 cggcactgct ccgcccaggg cggatcgaag gtcgcgcccg gcgactcgat caagccgagt
     1801 cgtgcgagac cccgggcctc gacggcgcgt gccgagtcgc gccatgcctc ccaggatgcg
     1861 ccgggcttgg cgacccgctc cgacgccgcc tgggcgtctc ggaccaactg gtagatggcc
     1921 cgctgctcgg ccgtgaaccg gccgctcacc ggaatcgtgc gggtgacgtc gcccgcatac
     1981 ccgcggtagg cggcgcccac atccatcacc accacgtcgc cggcctgcat gcggcgatcg
     2041 ttcttctcgt agtggtactg ggtcgagttg ggccccgatc cgacgatcga cccgaacgat
     2101 ggcccatcgg ccccggcccg acggaagcca ccctcgatca tcgcctccag ctcatactcc
     2161 cacattcccg gcttggccga ccgcatggcc tgcttgacgg acccgaccgt gatgctgatc
     2221 gcgcggcgca actgcgccag ctcggccggg ctcttgatgg cccggaggct gtcgagccgc
     2281 ggatgcgcat cccgaacctc gaacccacta ccccgatgcc gcgccaccag gtcggcgacg
     2341 aaccgggcgc cccgggtgag cgagtcctga cccgctgcat cccaggtggc aaagtcgcga
     2401 aggtcgtaga ccggcagacc gagaccgacc agcgaatcca ccatcggcgc gagcgcggga
     2461 agcgagcgca cggcaagccc ggtctgtcgg gcgaccgcgg cggagtcggg tgggaaccca
     2521 tcgtagagcg cgcggcgagg atctctcgag gcggtgaaga gcgtcccatt ctcggcccca
     2581 cctcgcttca ccaggaccag ggcggcgttg ggctcgagaa acccggtgag gtagcgaaac
     2641 gccggcagct gggcccagcg cccgatgctc accggatccg gagccccaaa agcgaccacc
     2701 accaccccgc tgtccaggtt ggcggtcaga gagtcgcgcc gggcggcgta ctcggcgggg
     2761 gcaataacct gcgccgcgag gaccggagcc agcgcaaggg ttgaaaccca gcacagcaga
     2821 tgagtgcgta tcatgctcgt agttaccttg gtcggagtcg gatgaaacaa gtacgacaaa
     2881 tttgtagctt tgcggcgctg ttgacaaaac catcaggatg aagcataaat atgcacatga
     2941 tcgctcctcg cgcgccgcat ctctccgcca tcacactccg gctcgacgcc ctgggcgcct
     3001 gcctgtgtat gtgcgcctgt atggagaacc tcccgagaga tcccttctag cggaaaaccc
     3061 accggagcgt gaagcgacgc caggcccgcg gaaggaatcc gcgggccttt gttttgtgcc
     3121 tattggagta atgaacgtgg acatcgacga cagcaccccg accgagcagt tcatcgggtg
     3181 gacgatggag cgctttggta accggagaat ggtgatcacc acctcgttcg ggatggaggg
     3241 gtgcgcgctc atcgacatgt acgcccggca gggagcagcg gtcaccgtcg tgtacatcga
     3301 taccgggttc ttctttcccc agacctacgc cctgcgcgac cgcatggtga gccggtatcc
     3361 gatgatcacg ttcatcaacc gcggcacttc gctgaccccg gcagcccagg aggctcggta
     3421 cggtcccgag ctctggcgcc gagaacccga tcggtgctgc gagcttcgcc gcgtcgagcc
     3481 gttccagcag gcgctcatcg ggaccgatgt gtggatcacg gccatcaccc ggactcaagg
     3541 cagtacccgg agcgataccc cgctggtgag ctgggactgg aagtatcagg tcctcaaggt
     3601 ctgcccgctt gccagctggg acaggggccg cgtctgggaa tacgtgaagc gtcacggcgt
     3661 gccctataac gagctgcacg agcgcggtta tccgagcatc gggtgcacct actgcacgac
     3721 tccagtgcca ggcgcctcgc cgggtcagta cagccgggct gggcgctggg ccgggacgga
     3781 gaagaccgag tgcggtttac acgggatcgg gaagaacaag gagttcacac ctctctcctc
     3841 atcccgagcg tagcgaggga cctg
//
LOCUS       DASYRV010000485         3052 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3010799, whole genome shotgun sequence.
ACCESSION   DASYRV010000485 DASYRV010000000
VERSION     DASYRV010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3052
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3010799"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1767)
                     /locus_tag="VGQ24_13075"
     CDS             complement(<1..1767)
                     /locus_tag="VGQ24_13075"
                     /inference="COORDINATES: protein motif:HMM:NF009381.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEV8455825.1"
                     /translation="MKIYGPDAIRNVAFVGHGASGKTTLVDALAFVSGSSRRHGSIKD
                     GSTLTDTSPDEVERKHSISLGLGLAEWMNVKVNLLDTPGYLDFFGEVICGLSVADAAV
                     VVVSGVSGVEVGTEKCWQACDHFHLPRLIFVSGMDKEHANFERVFSDIKERLTPKVLP
                     VEIPVGDGFQFKGIINLFTQTCQLFKPGSKAGEYEEVPVPAEYQDAFSRYAEQMTEAV
                     AATDDVLLEKYLSGERIAREEVVPAMKKAMLAGEIVPLFCGSGELQHGVRPLLTELVE
                     LFPAPAELKPPVEAPLVGRVFKTVSEPHVGDVSLFRLYTGKLKNGDEVWNAEHNVIEK
                     LNHLSVQQGKERHEIAELHTGDIGSVAKLKDTHTNDTFCGKSHPVRLPPMEFPDPEAT
                     SAVVVKQRGEEDKLAAGLHKLHEEDPTFHFEYNSELGQTLIHGMGERHFEILLGRLVR
                     KYGVHAELGRPRVAYRETFKGIAEGQGKHKKQSGGRGQYGDCWIRISPLARGSGYEFV
                     DSIVGGVIPNKFIPAVDKGVQEAAQRGPIAGYPCVDFRCECYFGSYHDVDSSEQAFKM
                     AGILAFRNVTPKARPVLLEPITA"
     gene            2058..>3052
                     /locus_tag="VGQ24_13080"
     CDS             2058..>3052
                     /locus_tag="VGQ24_13080"
                     /inference="COORDINATES: protein motif:HMM:NF039196.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEV8455826.1"
                     /translation="MKTRTELNDNAEDTVLDRRQLLDALQRMRQGDFTVRLPGSLIKI
                     DGKIADTFNEIVAANQKIAQELKRVGQVVGKEGKTRERAKFDQPRGAWGEMETSVNTL
                     IDDLLRPTTEVTGAIAAVAQGHLTQTMRLDVDGRPLEGEFLRSATIVNTMIQQLGVFT
                     SEVTRVAREVGSDGKLGGQAQVPGVSGVWKDLTESVNSMASNLTAQVRNISEVTIAVA
                     SGDLSRKITVDVRGEILQLKEAINTMVDQLRGFASEVTRVAREVGTEGKLGGQAVVPG
                     VAGTWKDLTDSVNAMAGNLTAQVRNIAEVTTAVARGDLSRKITVNVSGEILELKNT"
BASE COUNT          574 a          992 c          931 g          555 t
ORIGIN      
        1 cgcggtgatc ggctccagca gcaccggccg agccttcgga gtcacgttcc ggaacgccag
       61 aatgcccgcc atcttgaatg cctgctcgct cgaatcgaca tcgtgatacg agccgaagta
      121 gcactcgcag cggaaatcga cgcaaggata gcccgcgatc ggcccgcgct gcgccgcctc
      181 ctggacgccc ttgtcgacgg ccgggatgaa tttgttggga atcacgcctc cgacgatgct
      241 gtccacgaac tcgtagcctg acccgcgcgc caggggcgag atccggatcc agcaatcgcc
      301 gtattggccg cggccgccgc tctgcttctt gtgtttcccc tgcccctcgg caatgccctt
      361 gaacgtttcc cgatacgcca cccgcggacg accgagctcg gcatggaccc cgtacttccg
      421 caccaggcgc cccagcagga tctcgaaatg gcgctcgccc atgccgtgaa tcagggtctg
      481 ccccagctcg gagttgtact cgaaatgaaa agtcgggtct tcctcgtgca gcttgtgcag
      541 tccggccgcg agcttgtcct cctcgccgcg ctgcttgacc accaccgcag aggtagcctc
      601 cgggtcggga aactccatcg ggggcaggcg gaccggatga ctcttgccgc agaaggtgtc
      661 gttagtgtgg gtgtccttga gcttggccac cgagccgatg tctccggtat gcagctcggc
      721 gatctcgtgc cgctccttgc cctgctgcac cgagaggtgg ttcagctttt cgatgacgtt
      781 gtgctccgca ttccagactt catcgccgtt cttgagcttg cccgtgtaga gccggaagag
      841 cgatacatcg cccacatgcg gctcggagac cgtcttgaac acccggccca ccagcggcgc
      901 ctcgaccgga ggcttgagct cggcaggagc gggaaacagc tcgaccagct cggtgagcag
      961 cggccgaacc ccgtgctgca gctcgccgct gccgcaaaag agcggcacga tctcccctgc
     1021 gagcatcgcc ttcttcatgg caggcaccac ctcttcgcga gcgatgcgct ccccactcag
     1081 atacttctcg agcagaacat cgtcggtggc ggctacggct tcggtcattt gctcggcata
     1141 gcgggaaaac gcatcctggt actcggccgg aaccgggacc tcctcgtatt ctccggcctt
     1201 ggaccccggt ttgaagagct gacaggtctg ggtaaagagg ttgatgatgc ccttgaactg
     1261 gaacccgtcc cccacgggaa tttccaccgg caagactttc ggggtcagcc tttccttgat
     1321 gtcgctgaag acccgttcga agttggcgtg ctccttgtcc attcccgata cgaaaatcag
     1381 cctggggagg tggaagtgat cgcaggcctg ccagcatttc tcggtgccga cctccacacc
     1441 gctcaccccg gataccacga ccaccgcggc gtccgccaca gagagcccgc agatcacctc
     1501 accgaagaaa tcgaggtacc ccggcgtgtc gaggaggttg accttcacat tcatccactc
     1561 ggccaatccc agaccgagag aaatggaatg tttgcgttcg acttcgtcgg gagaggtatc
     1621 ggtgagggtg ctgccgtctt tgatcgatcc atgccgccgg ctggaaccgg agacgaaagc
     1681 gagggcatct accagggtcg tcttgccgct cgcgccatgc cccacgaaag cgacgttcct
     1741 gatggcgtca gggccgtaga tcttcaccgc gcctccttca atctcggggt tcccgattct
     1801 gcctccagcg gagtcctttg tcaattaagt ggttacgctc acatccccgc accggcgggg
     1861 tcccccccca agccacccgg ctcttgcgcg gtcgaccgga tatcgatacc gtatctttag
     1921 tcggggccaa cacttaaagc ccggccttgg cggatggagc agcggctcca tcggtcgaag
     1981 gcgccacccc tgcgaggcat gcggggcggc gcttttgctt ttcccccttc ctcccttgcc
     2041 gtgatttggg tgaccgcatg aagactcgaa cggaattgaa tgacaacgcc gaggataccg
     2101 tgctcgatcg ccgccagctg ctggacgcgc tccagcggat gcggcagggc gacttcacgg
     2161 tccggctgcc gggctcgttg atcaagatcg acggcaagat cgccgacacc ttcaacgaga
     2221 tcgtcgccgc caaccagaag atcgcccagg agctcaaacg ggtcggacag gtcgtcggga
     2281 aggaagggaa aactcgcgaa cgggcaaaat ttgatcagcc ccgcggagcc tggggcgaaa
     2341 tggagacctc ggtcaatacc ctgatcgatg atctgttgcg gcctaccacg gaagtcaccg
     2401 gcgccattgc ggcggtcgcg cagggacacc tgacgcaaac catgcggctc gacgtggatg
     2461 ggcgcccgct ggaaggcgag ttcctccgct ccgccaccat cgtcaacacg atgattcagc
     2521 agcttggagt gttcacctcg gaagtcactc gcgtggcgcg tgaggtcggc tccgacggca
     2581 agctgggcgg gcaggcgcag gtgccgggcg tgagcggcgt ctggaaggac ttaactgaga
     2641 gcgtcaactc gatggccagc aacctcactg cgcaagtccg caacatttcg gaggtcacga
     2701 tcgccgtggc cagcggcgac ctctcccgca agatcaccgt ggacgtccgg ggtgagatcc
     2761 ttcagctcaa ggaagctatc aacacgatgg tggaccagct gcgcggtttt gcctccgaag
     2821 taacccgcgt ggcccgcgaa gtcggtaccg aaggcaagct cggcggccag gcggtcgtac
     2881 cgggcgtcgc gggcacctgg aaagacctga ccgacagcgt caacgccatg gcgggcaacc
     2941 tgacggcgca ggtgcgcaat atcgcggagg taacgacggc ggtggctcgc ggcgacctct
     3001 cgcgcaagat taccgtgaac gtgagcggcg agatcctcga gctcaagaac ac
//
LOCUS       DASYRV010000486         4229 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1651376, whole genome shotgun sequence.
ACCESSION   DASYRV010000486 DASYRV010000000
VERSION     DASYRV010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4229
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1651376"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(58..1023)
                     /locus_tag="VGQ24_13085"
     CDS             complement(58..1023)
                     /locus_tag="VGQ24_13085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455827.1"
                     /translation="MRYREADLSRVTTIPVAGRRNKVEPELLASPPGPNRSFTAFLES
                     LPDVLAARDLRLVIEAVATAKRGGRGVILLLGGHVIKVGLGPLVSEWLARGIVTHIAL
                     NGAAAIHDFELAAFGGTSEDVESGLADGSFGMAEETGAEMNAAIARAAAADQGMGEGL
                     ALALAERKQRPGKEASVLLSALEHDVPVTVHAAIGAEIIHQHPSSDGSAVGATSHRDF
                     RRLAGSIPDLDQGGVVLNWGSAVLMPEVFLKALTVARNTGAGRPTHFVAADFDMQRHY
                     RPRVNVVQRPTRAGGSGFLLTGHHEILIPLLVWGVIEALEMKASR"
     gene            complement(1026..1796)
                     /locus_tag="VGQ24_13090"
     CDS             complement(1026..1796)
                     /locus_tag="VGQ24_13090"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HEV8455828.1"
                     /translation="MIGVGLVLALMQAAAAGSQPDPSAPTFVSYPFAVGEKLSYSAKL
                     GMLTLGSGTLEVAAVDTVRGVESFKFRFRLQGKTMFYSLDDVLESWAGTSDLSSRRFV
                     QDFVENEKAIKRQYEIYPDSGFYREHGREKTQPTPDEPLDDAAFFYFVRMTPLEVGKK
                     YAYHRYFRKDKNPVTIQVVKREKMELPDGSKVQCLVLHPVIDTKGLFSKRSETRIWLT
                     DDARRLPVQIRSKFPFGTITLRLKDMVLPGTTTSAMSR"
     gene            complement(1793..2590)
                     /locus_tag="VGQ24_13095"
     CDS             complement(1793..2590)
                     /locus_tag="VGQ24_13095"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEV8455829.1"
                     /translation="MIYVCIPSYNEAPTVGLLLWKVRQVFAGFPREYQLLVLDDGSDD
                     ATAEVLERYTRVLPLTVTRHQARRGYAASVEELLRQAVERTDRPKRDAAILMHADFAH
                     GPNFIPDLVRRIESGADIVIAQSKLEGEPSRARRLVRRLAPVLLRGVVTVPGVSDVVS
                     GFSIFRLIALRNAFRNQPPPLLTTEGWAANAELYDRAARHARRLETISAVERRDLRQR
                     PNRTNSWDAALSILRSRGVLRHLSSWPMEADADSPREPHKQAEVASS"
     gene            complement(2587..3666)
                     /locus_tag="VGQ24_13100"
     CDS             complement(2587..3666)
                     /locus_tag="VGQ24_13100"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8455830.1"
                     /translation="MTPAIVHVASGREWRGGQRQVWLLARELARRGVDQAVVTAGDSE
                     LARRLGSAGVRVRPVRWQAGLDPRVLPAVLGELRHRRAILHAHDPHALTLAGVCAGLS
                     GAPLVATRRVTFPLRRKLFWDRAQRVIAISGAVREALARDGLAPERLAVIPSAVDVAE
                     LRATTGPDVRTRFGLPEKGQVAVSLGALTPEKDQSTLMEAAALLVRDLPALQWVIVGE
                     GPLRSVLQGRLARLGLEDRVHLVGQLADPHMALAGADVFVLSSLAEGLGSSVLAAMAL
                     DVPVVATRVGGVPEVLGSGAGVLVPAGRPADFAAAVHRVLVEPGYATDLKQAARQELR
                     RFTVGAMAAQVVQVYRSCAHSLEGS"
     gene            complement(3663..>4229)
                     /locus_tag="VGQ24_13105"
     CDS             complement(3663..>4229)
                     /locus_tag="VGQ24_13105"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8455831.1"
                     /translation="GIVKEHGGRIMLSSEEGKGSTFTVQLPLSTRAPVPAADSLSRAP
                     TKRLRVLVVDDEPHILHYMRATLEAWGHIPVVAGDGQEALARAIREPFDLIISDLRMP
                     RFGGREFYEELSRQNPGMAGRLVFSTGDTVRGDTMAFLETLDRPYLHKPFSLAELRTL
                     LADVGRESGPQAAVRDSEPLPADPLPKT"
BASE COUNT          757 a         1387 c         1415 g          670 t
ORIGIN      
        1 aatagaagtc tataaagagt ccaggtgagg aagtctacga catccaggta gacgtcttca
       61 tctggacgct ttcatctcaa gagcctcgat cactccccaa accaacaatg gaatcagaat
      121 ttcatggtga cccgtcaaca agaagcctga gcctccagcc cgggtgggac gctgcaccac
      181 gttcacccga ggccggtagt ggcgctgcat gtcgaagtcg gcggccacga agtgggtcgg
      241 ccggccggcg ccggtgttcc gggccaccgt caacgccttg agaaagactt cgggcatcag
      301 cacggcgctg ccccagttga gcaccactcc cccctgatcc aaatccggaa tcgaccctgc
      361 caggcggcga aagtcacggt ggctggtggc cccgaccgcg gagccgtcgc tcgacggatg
      421 ctgatggatg atctcggcgc cgatggcggc gtgaaccgtg acggggacgt catgctccag
      481 cgcggaaagg agaaccgagg cctccttgcc cgggcgctgc ttccgctccg ccagggcgag
      541 cgccagtccc tcacccattc cctggtcggc cgccgccgcc cgggcgatgg ccgcattcat
      601 ctccgcaccg gtctcctccg ccatgccgaa gctgccgtcc gccaagccac tctccacatc
      661 ttcgctggtc ccgccgaacg cggcgagctc gaaatcgtgg atggcggcgg ccccgttgag
      721 agcgatgtgg gtgacgatac cgcgggccag ccattcgctg accagcggtc ccaagccgac
      781 cttgatcaca tgaccgccga gcaggagaat gaccccccgg ccgccccgct ttgccgtggc
      841 cacagcctcg atgacgaggc gcaggtcccg cgcggcgagg acgtcgggca ggctctcgag
      901 gaaggcggtg aaggagcggt ttggtccggg gggtgatgcc agcagctcgg gctcgacctt
      961 gtttcgccgc ccggcgaccg gaatggtcgt gacgcggctg aggtcggcct cgcgatagcg
     1021 cacggtcagc ggctcatggc tgacgtcgtg gtgcctggga ggaccatgtc cttgagccga
     1081 agagtgatcg tcccgaaggg gaacttggaa cggatctgca cgggaagccg gcgtgcgtcg
     1141 tcggtgagcc agattctggt ctcggagcgt ttggagaaga gtcccttggt gtcgatgact
     1201 ggatgcagca ccaggcactg gaccttgctg ccgtcaggca gttccatctt ctcccgtttg
     1261 accacctgga tggtcaccgg gttcttgtcc tttcgaaaat accggtggta cgcgtacttc
     1321 ttaccgacct cgagcggtgt catgcggacg aagtagaaga acgcggcgtc atccagcggc
     1381 tcgtcggggg tcggctgggt cttttcccgc ccgtgctcgc gatagaagcc cgaatcagga
     1441 tagatctcgt actgccgctt gatggccttc tcattctcca cgaaatcttg tacgaaccgg
     1501 cgggagctca ggtctgaggt gccagcccac gactcgagta cgtcgtccag cgagtagaac
     1561 atggtcttgc cctggagccg gaacctgaac ttgaagctct ctacccctcg cactgtgtcc
     1621 acggcagcga cctcgagggt gccggagccc agcgtgagca tgcccagctt ggcgctgtag
     1681 gacagcttct cgcccacggc gaagggataa gagacgaacg tcggcgccga aggatccggc
     1741 tggctgcccg cagcggccgc ctgcatcagt gcgaggacca ggcccacccc gatcatgacg
     1801 acgccacctc ggcctgctta tggggttccc gcggactgtc tgcgtcggcc tccatcggcc
     1861 aggaggagag atggcgcagg acaccccgcg atcggagtat gctgagcgcg gcgtcccacg
     1921 agttcgtccg gttggggcgc tgccgcaggt ctcggcgctc caccgcactg atggtctcca
     1981 gcctgcgggc atgccgagcc gcgcgatcgt agagctcggc gtttgccgcc cagccttcgg
     2041 tggtgagcag cggaggcggt tgattgcgaa aggcgtttcg cagcgcgatc aggcgaaaga
     2101 tcgagaagcc ggagaccacg tccgatacac cggggaccgt cacaacgccg cggaggagca
     2161 ccggcgccag ccgccgcacc aggcgccgag cccgggatgg ctcgccctcg agcttgctct
     2221 gggcaatcac gatatcggca ccgctctcga tccggcgcac caggtcgggg atgaaattgg
     2281 gcccatgggc aaagtccgca tgcattagga tagcagcgtc gcgcttgggt cggtcggtgc
     2341 gctccacggc ctggcggagc agctcctcga cgctcgccgc atatccccgg cgggcctggt
     2401 ggcgagtcac ggtcagcggg agcacccggg tataccgctc gagcacctcg gcagtagcat
     2461 catcggagcc gtcgtccagc accagtagct ggtactcccg cggaaatccg gcgaatacct
     2521 ggcgaacctt ccagagcaga agcccgacgg tcggagcttc gttgtaactc ggtatgcaaa
     2581 cgtaaatcat gagccctcaa gagaatgggc gcacgaacga taaacctgca cgacctgtgc
     2641 tgccatggcg cctacggtga atcttcggag ctcctggcgg gccgcctgtt tgagatcggt
     2701 ggcatacccg ggctctacga gcacgcggtg gaccgcggct gcaaaatcgg cgggtcttcc
     2761 ggccggtacc agcacgccgg caccggatcc cagcacctcc ggaacacctc cgacccgggt
     2821 ggcaaccacc ggcacgtcca gcgccatggc cgcgagaacc gagcttccga gcccctcggc
     2881 aagcgagctg agaacgaaga cgtccgcacc agcgagtgcc atgtggggat cggcgagctg
     2941 accgacaaga tgcacgcgat cttccaaacc gagccgcgcc agccggcctt gcaggaccga
     3001 gcgaagcggc ccctccccaa cgataaccca ctggagggcg ggcaagtccc ggaccagcag
     3061 ggcggccgct tccatcaagg tagactggtc cttttccggg gtaagcgcgc cgaggctcac
     3121 ggcaacctgt cccttttccg ggagaccgaa acgtgtgcgg acgtcggggc cagtcgtggc
     3181 tctcagctcg gcgacgtcga cggcggaggg gatgacggcg aggcgttcgg gggcaaggcc
     3241 gtcacgagca agcgcctcgc gcacggctcc cgagatcgcg atcacgcgct gcgcgcggtc
     3301 ccagaacagc ttccgcctga gcggaaaggt tacccggcgg gtggcgacaa gcggagcgcc
     3361 gctgagcccg gcacacaccc ctgcgagggt gagtgcgtgc ggatcgtggg cgtggaggat
     3421 tgctcttcgg tggcggagct cgccgagtac ggcggggagg acgcgagggt cgaggccggc
     3481 ttgccaccgg accggacgaa ctcgcacacc ggcagagcca aggcgacggg ccagctcgga
     3541 atctcccgcg gtgacgaccg cctgatcgac gccacggcgg gcgagctcgc gggccagtag
     3601 ccagacctgc cgttgtccgc cacgccactc ccggccggaa gcaacatgga cgatggcggg
     3661 agtcacgtct tcggcagtgg gtcggccggc aagggttcgc tgtcgcgcac ggcggcctga
     3721 ggaccgctct ctcgtccgac atcggccagc agggtccgaa gctccgccag gctgaaaggc
     3781 ttgtgcaggt aagggcggtc gagggtctcc agaaaagcca tcgtgtcgcc ccgcacggtg
     3841 tctccagtgc tgaacaccag gcggccggcc atgcccgggt tctggcgaga cagctcctcg
     3901 taaaattcgc ggcccccgaa ccggggcatc ctcaagtccg agataataag atcgaagggc
     3961 tcccggatgg cgcgggccag cgcttcttgg ccgtcgcccg cgacgaccgg gatgtgcccc
     4021 catgcctcga gggtggcccg catgtagtgc agaatgtgcg gctcgtcatc caccacgagc
     4081 acccgcagcc gcttcgtcgg ggcccgggac aaggagtcgg cggccggcac cggtgcccgg
     4141 gtcgagagcg gcaactggac ggtgaaggtc gagcctttgc cctcctcgct cgagagcatg
     4201 atgcggccac cgtgctcctt cacgattcc
//
LOCUS       DASYRV010000487        11967 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_611828, whole genome shotgun sequence.
ACCESSION   DASYRV010000487 DASYRV010000000
VERSION     DASYRV010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11967
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_611828"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1490
                     /locus_tag="VGQ24_13110"
     CDS             <1..1490
                     /locus_tag="VGQ24_13110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455832.1"
                     /translation="VVGTLYLDVATAELVRFRFSFTPASYLDRQLEDISVVLENALYE
                     NRYWLPYRQEIEIRRRATWLDFPARGIIRGRWEIGDYELNADVPANLFAGAPIAGLLQ
                     PRKADSTWSEPLEQAIAGVAQPVNRQDMETLRVEVERIAASRVLAGLPSTRLAAGSLS
                     DLAHVNRVEGLTVGFGGVIGLRGSRIALRPSVAYGTSDDRLTGSLVASWSTGATELSL
                     SASRRVRDFSDLPVIAPLVNSILAQEGGKDHGDYVLLHGLGAGIRHRLSGRTSVTLDA
                     GLEESRSVSTTASPATGSYRANPALGSGTYRVARLGVERSSGGIAMRHDLQGRLLLEG
                     GEGAADYGRLTAVGRWSVVLGRSELLARAYLGVGTDGLPPHRSFVLGGRGTLVGEPYR
                     AYGGRSAGLAHLEWRFEVPAPALSLGSFASTGRRATVAPFVALGYAGRSIAGLPWTDT
                     DGVRPVAGFAVEWLMRLIRLEVGIGLRHGDVGVTLDVNRDWWGLL"
     gene            1562..3796
                     /locus_tag="VGQ24_13115"
     CDS             1562..3796
                     /locus_tag="VGQ24_13115"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HEV8455833.1"
                     /translation="MQFTDEWLVPSIENLLSPEAMTALRQESGPAVSLWEVLVQRKVA
                     SDQQILDAIAARFRFPLADLTKPDPKLIATVPEQLARRFNVVPVGQTDSYLEVATSNP
                     FDMDAEKMLAFATGREVRMLLGSPSKIREKLDELYRETESVVSRLLQGLSGDFEVEQL
                     KDEEESAASAEQASQRPILRLVDGMIADGVSNRASDIHIEPIEGGVIVRYRIDGVLRQ
                     AMKIPRSAGVPLISRVKIMSGLDIADRLRPQDGRARVSVNGEPVDLRVSTLPASHGEK
                     VVIRILNQKATTLSLTSLGLADDEQQAIKTLLSHKEGIILVTGPTGSGKTTTLYSCLR
                     TVQGEGINIVTVEDPVEYKLGQNIVQVQVNEKAGLTFAAALRSILRQDPDVVLVGEIR
                     DKETAQIALQASLTGHLVLSTLHTNDAPNAITRLVDMGMEAYKIAPALRGVVAQRLMR
                     RLCPACRVISTEPIGGSLSRFVPPGATLYQAVGCTDCSMTGYRGRFSIVEVLTMTPEL
                     ERRIGEGATAEKIAEAARAAGMRSLFGSGLRHVHSGESTLEELLRVTDVPHEEARPAR
                     PSGPRPRISTPHAASPLQGLATAAPSSAEPLEFLMDLLEESPPADGALAEARGRGASV
                     LLVEDEDQLRRVMKDLLQREGYRVAEARDGIQALDEVDRFAPDVIILDLNLPGIDGYS
                     VLAQLRSRPSTRDIPIMVLTAKGDEDNEVRVFELGADDFVTKPFRARSLTARIEAVLG
                     RRRA"
     gene            3916..4965
                     /gene="hisC"
                     /locus_tag="VGQ24_13120"
     CDS             3916..4965
                     /gene="hisC"
                     /locus_tag="VGQ24_13120"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEV8455834.1"
                     /translation="MRSQTGYSLASPAARRKLNQNESPYDFPDELKREVFDQAAEGWQ
                     RYPEFAPPDLLVALAEHYGWVADGVLVGNGSNELIQAVLSVTLAAGDAVVAPSPTFSL
                     YRLLTSVLGGRYVPVPLGRGFAYDVERLIDEAVREQARVIVLNSPNNPTGSVLPEGAV
                     GRILAETSALVMCDEAYQDFGGPTALGLLARSSRVVVLRTFSKALGLAGLRFGLALAH
                     PAVAREIAKGKLPYNVNLVTLAAARTALRHAPLLAERTREVIATRERFVERLRGLPGL
                     TVYPTAANFVLIRSHQLPAKELFLRLYENHGILVRDVSGSPELAECLRITIGTPEDMD
                     AVIRALEQILGKGKQ"
     gene            5059..5649
                     /gene="hisB"
                     /locus_tag="VGQ24_13125"
     CDS             5059..5649
                     /gene="hisB"
                     /locus_tag="VGQ24_13125"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF002111.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HEV8455835.1"
                     /translation="MPRVAEITRTTKETDLRVRVDLDGRGEAKVKTGIGFFDHMLEAL
                     ARHALLDLTVEARGDLHVDGHHTVEDTGIVLGQAIAKALGDRAGIRRYADAMVPLDEA
                     LVRCVIDVSGRPYLSYNVEIPKWQMLGDYDVFLTPEFFRALVLNAGLTVHLDLQRGDN
                     PHHIVEAAFKAFARALDGATRQDPRVAGVPSTKGTL"
     gene            5646..6266
                     /gene="hisH"
                     /locus_tag="VGQ24_13130"
     CDS             5646..6266
                     /gene="hisH"
                     /locus_tag="VGQ24_13130"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR01855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEV8455836.1"
                     /translation="MIVVVDYGVNNLASVVRALGASGHRAQLTGDPDEVRRADRVLVP
                     GVGNFGQGSRTLSSTGLGEAVREVADAGRPVLGICLGLQLFFEMSEEAPEARGIGLLP
                     GRVRRFSSGLPVPHVGWAKVDLTEAGRRHPVLAPTFIDGAQFFYHVHSYHPTSLPDDA
                     VLGTGDYGGVFPTLVGQGSVIGAQFHPEKSQVAGIALLAAFAEWRP"
     gene            6263..6730
                     /locus_tag="VGQ24_13135"
     CDS             6263..6730
                     /locus_tag="VGQ24_13135"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEV8455837.1"
                     /translation="MTSVRTSLVDVYVLRGEGASLECLLLRRGEGGRCPGSWETVHGH
                     IEAAERPAGAVARELEEETGLTPVRLYNLSRVELFYQHQTDEVALVPVFAAFVAGDAT
                     VRLGAEHDGFEWLALPDARRRFAWPRERRALDDIVTLLVSGSAGPVDDVLRVC"
     gene            6724..7476
                     /gene="hisF"
                     /locus_tag="VGQ24_13140"
     CDS             6724..7476
                     /gene="hisF"
                     /locus_tag="VGQ24_13140"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: protein motif:HMM:NF013168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HEV8455838.1"
                     /translation="MLARRIIPCLDVAGGRVVKGVHFESLRDAGDPVEQASRYDAEGA
                     DELVFLDISASPEARRTTLEMVSRVAETIFIPFTVGGGIRSVPDAAAALRAGADKTAV
                     NTAAVRDPSLISRLAESFGSQCVVVAVDVKRIGDRLTVMVNGGREQTSLEAVDWSRRL
                     EALGAGEILLTSMDRDGTGQGYDLPLLEAVTRTVSIPVIASGGAGSLAHLAEAFEAGA
                     HGVLAATIFHFKDSSLPRARAYLRERGYPVRP"
     gene            7473..8903
                     /locus_tag="VGQ24_13145"
     CDS             7473..8903
                     /locus_tag="VGQ24_13145"
                     /inference="COORDINATES: protein motif:HMM:NF024627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NosD domain-containing protein"
                     /protein_id="HEV8455839.1"
                     /translation="MILIALAVLSAFTLTPSISGGAPCVRPTRAGTQVQGEVRICPGR
                     YRIPDQADQGVIIIAASGTRVDLTGVVLESGDSVPGRFIGVGIASRGVDGVTISGGAI
                     RGYRYGVRLEGGRAHRVTGSDLSGSRNRGVRSTPARPDSADRLDLIRPDVFEGYGGGI
                     LLRGTVAASVIRVTARGAQNGIALLEARESYIADNDLASNDGWGIHLWRSSRNIIARN
                     KVDHTRRCESQVPAGECGAAAVLLRDASDSNTIVDNDLTASSLGFFLTGERRQGRPSV
                     GNLVYRNDASDALRTGFTAAFGWSNTFLENRADSAGIGFRLDHSGGSTLRGNTVIGSR
                     TVAIVSDHGADNAILANVLIGGAVGIRVGAPEAGGEPSRRYRIDDNVLARLDQGIVVE
                     RTTRAQLRGNLFDGVGDGLVLDGAGHATEVTGNIFLRASRWFIEAPDLAAGGNYWATA
                     DASAATAKVKGRISVLPWKPASAAGY"
     gene            complement(8897..11158)
                     /locus_tag="VGQ24_13150"
     CDS             complement(8897..11158)
                     /locus_tag="VGQ24_13150"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEV8455840.1"
                     /translation="MAAGAVLVCVVAAAVLTNSVVSPAVALGCAVILLLISSWNTTWE
                     LALHLVAAALLGGVLWWAQDRFWWLAVFAALGIGATFLVAVIRSRAQIRKAQARADQL
                     AIQLDRRISELFSLQELSYVLSESMQPDRIVDQVARYAARFLQADGAVVALVEMEDRA
                     LRVVAASGSLGPLRGQVSHEPGSALVRVAIDRDRIEVAQNGDTQSVNLLGLMVRSAAV
                     APLKAQGITMGALAVADRRGGPFTDEDRRLLSTVATNAAVVLANSRLYEMVRRSEEEW
                     ETTFNALAEGIAVVGPDGAILRANLALAALVEVPERELVGQNLRELLSGAAEAVSGLI
                     EVSYRGERTVPLVVRLEHNNRVLRLTAAPLAGAEPGPVVILIEDVTEQRLLEAQIIQN
                     DKMASIGQLVSGVAHELNNPLTSIAGLAELLLERPPHPELPREHLRVIHDQAERAGRI
                     VRNLLTFARKGVPEQTAVDLNDVVSRTSLLIVYELQLHGIELSSELSPEPVIVLGDRY
                     ELQQVLLNLVTNAVQAVAGLEPGKPRGITLSTIRSNGEAILGVRDTGLGVPKHLAPYL
                     FTPFFTTKGPGEGTGLGLSLSYGLVKAHGGTLTYEPPPEGGAEFRVTLPLYELEPPRE
                     DAAAPEASVVAGRRILVVDEDPAVHRLLSALFASDGHSVKAVRSGKQALRLVREGAYD
                     LIIADMRVTAGTSEPFARALLDACPEVRSRLLVACSREEELPAGPGGYPLRRVSKPFN
                     LRDLKSVAMEIFQ"
     gene            complement(11202..>11967)
                     /locus_tag="VGQ24_13155"
     CDS             complement(11202..>11967)
                     /locus_tag="VGQ24_13155"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEV8455841.1"
                     /translation="AQLAEPGANWQRLTRDLLFQIYYPGIQDYDELLQDPRTPDPSRV
                     ALLSLDPWNITLEPEYYAEVDAERYARVKPLLWLWQSFDRSLLGGGNVHLGIRFRRIL
                     APHIFARLGKNFKCFQNVEFSFGYNLEVGDDVVVHRNVLLDDRGGITLGNRVSISDYA
                     NIYSHTHSIVDQKDVTNARTVLEDDVRITYHATVLAGVRVGRNAMVGANAVATKDVRP
                     YHVNVGIPAKSIRVKPNAPPEAYVTERVARRDSREP"
BASE COUNT         1939 a         3916 c         4070 g         2042 t
ORIGIN      
        1 tggtggtggg aaccctgtac ctcgatgtcg ccacggccga gctggtccgc tttcgcttca
       61 gcttcacacc ggcgtcatat cttgatcgcc agctggagga catcagcgtc gttctggaaa
      121 acgcgctgta cgaaaatcgc tactggctgc cgtatcgcca ggaaatagag atcaggcggc
      181 gggccacctg gctcgacttc cccgcgcggg ggatcatccg gggccggtgg gagatcggcg
      241 actacgagct caatgctgat gtgccggcca acctgtttgc gggggcaccg attgcgggac
      301 tgctccagcc acggaaggcg gattcgacgt ggagcgagcc gctcgagcag gcgattgccg
      361 gagtcgctca accggtcaac cggcaggaca tggagacgct ccgggttgag gtggagcgga
      421 tcgctgcgtc ccgcgtcctg gccggtctgc ccagcacccg tctggccgct ggttcgctca
      481 gtgacctggc gcatgtgaac cgggtcgaag ggctgaccgt gggcttcgga ggcgtcatcg
      541 gcctgcgagg aagtcgaatc gcgctccggc cctcggtggc ctacggcact tcggacgatc
      601 ggctcacggg atcgctggtc gcgtcgtgga gcaccggcgc aaccgagctg agcctcagtg
      661 catcccgacg ggtgcgtgac ttcagcgacc tccccgtcat cgcgccgctg gtgaactcta
      721 tcctcgccca ggagggcggg aaggatcatg gcgactacgt gctgctccac ggcctcggtg
      781 caggaattcg gcaccggctc agcggccgca cctcggtgac gctggatgct ggcctcgagg
      841 aaagccggtc tgtctcgacc acggcgtcgc cggcaaccgg gtcctatcga gccaacccgg
      901 ctctcggctc aggcacctat cgcgtcgccc ggttgggagt cgagcgcagc agcggcggca
      961 ttgcgatgcg gcacgacctc cagggcaggc tcttgctcga gggcggcgag ggcgcagcag
     1021 actatgggcg gctcactgcc gtaggccgct ggtcggttgt gctgggccgc tcagagctgc
     1081 tcgcgcgagc gtatctgggc gtcgggacag acgggcttcc tcctcatcgg agctttgtcc
     1141 tcggagggcg gggtacgctg gtcggagagc cgtaccgagc ctatggcggc cgctccgcgg
     1201 gattggccca cctcgagtgg cggttcgagg ttccggctcc ggccctctcc cttggatcat
     1261 ttgcctccac gggccgccgc gcgacggttg cccccttcgt agcgctgggc tacgccggtc
     1321 gttccattgc cgggctgccg tggaccgata ctgacggtgt gaggcccgtg gcgggttttg
     1381 ccgtcgaatg gctcatgcgg ctgatacggc tcgaggtggg tatcggactg cgacacggag
     1441 atgtcggggt gaccctggat gtgaatcggg actggtgggg gctgctgtaa ccttcttatt
     1501 ttccacttgg actcccccgg cctcccgtcc cgctggtttc atcacacaac agagcgtggc
     1561 aatgcagttc accgatgaat ggttggttcc ctccatcgaa aacctcttgt cccccgaggc
     1621 catgacggct ttgcggcagg agagcgggcc agctgtgtcg ctctgggaag tattggttca
     1681 gcggaaggtg gccagcgacc agcagatcct ggatgccatt gccgcccggt tccgtttccc
     1741 cttggcagac ctgaccaaac cggaccccaa gctgatcgcc acggtgccgg agcagctggc
     1801 ccgccggttc aatgtcgtcc cggtggggca gaccgattcc tatctcgagg tggcgacatc
     1861 caacccgttc gacatggatg ccgaaaagat gctggccttc gccaccggcc gcgaagtccg
     1921 catgctcctc ggctcgccat cgaagatccg ggaaaagctc gacgagctgt atcgggagac
     1981 ggaaagcgtc gtgtcccgtc tgctccaggg cctcagcggc gacttcgagg tggagcagct
     2041 caaggatgag gaggaaagcg ctgccagcgc ggagcaggcc agtcaacggc cgattctgcg
     2101 actggtggac ggcatgatcg ccgacggggt ctccaatcgc gcgagcgaca ttcacatcga
     2161 gccgatcgag ggcggcgtca tcgtgcgcta ccgcattgac ggggtgctgc ggcaggccat
     2221 gaagatcccc cggagcgcgg gcgttcctct catctcccgg gtcaagatca tgtccgggct
     2281 cgacattgcc gaccggctcc ggccccagga cggccgcgcc cgagtatcgg tcaatggcga
     2341 gccggtcgac cttcgggtct cgacccttcc ggcgtcgcac ggcgagaagg tcgtcatccg
     2401 gattctgaac cagaaggcga ccacgctatc gctcaccagc ctcggtcttg ctgacgacga
     2461 gcagcaggcg atcaagaccc tcctcagcca taaggaaggc atcatcctgg tgaccggccc
     2521 gaccggatcg ggaaagacga cgacgctgta ctcctgtctc cggacagttc agggtgaggg
     2581 aatcaacatc gtcaccgtcg aggacccggt cgaatacaag ttgggccaga acatcgtcca
     2641 ggtgcaggtg aacgaaaagg cgggactcac gtttgcggcg gcgctgcgct cgattctgcg
     2701 gcaggacccc gacgtggtgc tcgtcggtga gatccgcgac aaggagacgg ctcagatcgc
     2761 gctccaggct tcgctcactg gtcacctggt cctgtccacg ctgcatacca acgacgcacc
     2821 caatgccatc acccgtctgg tggacatggg gatggaagcg tacaagatcg ccccggctct
     2881 ccgcggcgtc gtcgcccagc gtctgatgcg ccggctgtgc ccagcctgcc gcgtgatctc
     2941 gaccgagccg attggcggga gcctctctcg ctttgtcccc ccgggcgcca cgctgtatca
     3001 ggcggtaggc tgcacggact gctcgatgac cggctatcgg gggaggttca gcatcgtcga
     3061 ggtactgacg atgacgccgg agctggagcg ccgcatcggc gaaggtgcca ccgccgagaa
     3121 gatcgccgaa gccgcccgag cggccggcat gcggtcgctg ttcggcagcg gattacggca
     3181 cgtgcactcg ggcgagtcca ctctcgagga gctgctacgg gtgaccgacg ttccccatga
     3241 ggaggcgcgg ccggcccgcc cgtccggccc ccggccccgg atctcgacgc cccatgcggc
     3301 ctccccattg cagggcttgg ccacggcggc accgtcgtca gcggagccgc tcgaattctt
     3361 gatggacctg ctggaggaat cgccgcctgc cgacggagca ttagccgaag cacgcggacg
     3421 gggagccagt gtccttctgg tggaagacga ggaccagctg cggcgagtga tgaaggacct
     3481 gctgcagcgt gaaggctatc gggtggccga ggcacgggac gggatccagg cgctggatga
     3541 ggtcgatcgg ttcgcgcctg acgtcatcat tctcgacctc aacctgccgg gcatcgacgg
     3601 ctacagcgtg ctggcccagc ttcgctcacg cccttctacc cgggacattc cgatcatggt
     3661 cctcaccgcc aagggcgacg aggacaacga agtgcgagta ttcgagctcg gcgccgacga
     3721 tttcgtgacc aaaccgttcc gcgcccgctc tctcaccgca cggatcgagg ccgtactcgg
     3781 ccgccggcgc gcttgaaccg gccgttcact ccagccgacc gagcccaccc cgccccctct
     3841 tcgccagatc caagcaccgg cacggcggga gcgctcccgc acgcagccga aggcctggcc
     3901 ctgatcaaac ctgccgtgcg ctcccaaacc ggctattcgc tggcctcacc cgcagcccgg
     3961 cgcaagctca accagaacga atctccctac gactttccgg acgagctcaa gcgcgaggtc
     4021 ttcgatcagg cggcggaggg ctggcagcgc tatccggagt ttgccccgcc cgatctcctg
     4081 gtggcgctgg cggagcatta tggctgggta gcagatggcg ttctggtggg aaacggttcc
     4141 aacgagctga tccaggccgt gctttcggta acactggcgg cgggcgacgc ggtagtggcg
     4201 ccgtctccca cgttctctct gtaccgcctg ctcacctcgg ttctcggcgg tcgctacgtg
     4261 ccggtgccgc tgggccgcgg attcgcctac gacgtcgaac ggctgatcga tgaagcggtc
     4321 cgggaacagg cgcgggtaat cgttctcaac tcgccgaaca atcctaccgg atccgtgctg
     4381 cccgagggcg ctgtcgggcg aatcctggcc gagactagtg ctctggtgat gtgtgatgag
     4441 gcgtatcagg acttcggcgg tcccaccgcg cttggcctgc tcgcgcgctc gtcgcgggtt
     4501 gtcgtgcttc gaaccttctc gaaggctctt ggcctggccg gtctccgctt cggactggcc
     4561 ctggcgcacc ccgcggttgc tcgcgagatc gccaagggta agctccccta taacgtcaac
     4621 ctggtcaccc tggccgcggc acggaccgca ctgcggcatg ccccgctgct cgccgagcgg
     4681 acgcgtgagg tgattgcgac gcgcgagcgg tttgtagagc ggttgcgggg cctgccgggc
     4741 ctgacggtct atcccaccgc cgccaatttc gtcttgatcc ggagtcatca gttgccggcc
     4801 aaggagctct tcctccggct ctacgagaac catggcatcc tggtccgcga cgtctccgga
     4861 tcgcccgagc tggcggagtg cctgcggatc acgatcggaa cgccggagga catggacgct
     4921 gtgatccgcg cgctagagca gatccttggt aagggtaagc agtgagcagt aagcggtgag
     4981 cggaccgctg ttctccgcgc ttatcgttca ccgcttacgg cttaccgctt accgctcacg
     5041 ctcttactgt tactgtctat gccccgagta gccgagatca cccggaccac caaagaaacc
     5101 gatctccgcg tccgggtgga tctggacggt cggggcgagg ccaaggtcaa gaccggcatc
     5161 gggttcttcg accacatgct ggaggcgctg gcgcgtcacg ccctgctgga tctcacggtc
     5221 gaggcgcgag gcgacctgca cgtggacggc caccacaccg tggaagacac cgggatcgtc
     5281 ctggggcagg cgatcgcgaa ggcgttgggg gacagagcgg gtatccgtcg ctatgccgac
     5341 gccatggttc cgctcgacga ggcgctggtg cggtgcgtga tcgacgtctc cggtcgtccc
     5401 tatctttcgt acaacgtcga gatcccgaaa tggcagatgc tgggcgacta cgacgtgttc
     5461 ctcacgccgg agttcttccg cgcgctcgtg ctcaatgcgg ggctcacggt gcatctcgac
     5521 ctccaacggg gtgacaaccc gcatcacatc gtcgaggcgg cgttcaaggc cttcgcgcgc
     5581 gcgctcgatg gtgcaaccag gcaggacccg cgggtggcgg gagtgccctc gaccaaggga
     5641 acgttgtgat cgtggtggtc gactatgggg tgaacaacct cgcgagtgtg gtccgagcgc
     5701 tgggggcaag cggccaccgg gctcagctca ccggagatcc ggacgaggta cgccgggcag
     5761 accgggtgct cgtccccggt gtggggaact tcgggcaggg atcgcgcacg ctcagttcga
     5821 ccggcttggg cgaggcagtc cgcgaggtag cggatgccgg gcggcccgtg ctcggcatct
     5881 gcctcggact gcagttgttc ttcgagatga gcgaggaggc gccggaggcg cggggcatcg
     5941 gactcctgcc gggccgagtt cgccgattct ccagcggcct gcccgtgccg cacgtcggat
     6001 gggccaaggt ggatctgacc gaagcggggc ggcggcatcc cgtcctcgca cccacgttca
     6061 tcgacggcgc tcagttcttc taccacgtgc acagctacca ccccacctcg ctgccggatg
     6121 atgcggtact cgggaccggc gactacggcg gcgtgtttcc gacattggtg gggcaaggat
     6181 ccgtcatcgg tgcgcaattt catcccgaaa aatcccaggt tgccgggatc gcgctgctgg
     6241 ccgcctttgc cgagtggcgc ccgtgacctc ggtgcgaacc tccctggtcg acgtgtacgt
     6301 gctccgcggc gagggcgcga gcctggagtg tttgctgctt cgacgcggcg agggcggccg
     6361 ctgtccgggc tcgtgggaga cggtgcacgg ccacatcgag gcggccgagc gcccggccgg
     6421 ggcggtcgcg cgtgagctgg aagaggaaac cggactcaca ccggtccggc tctacaacct
     6481 gagccgggtg gaattattct atcagcacca gaccgacgag gtcgccctgg tgccggtctt
     6541 tgccgcgttt gtcgccggag atgcgaccgt tcgcctgggg gcggagcacg acgggttcga
     6601 gtggctcgca ctgcccgacg cccggcgtcg gttcgcctgg ccccgggagc gccgcgcgct
     6661 ggacgacatc gtgacgttgc tcgtaagtgg gagcgcggga ccggtggacg acgtgctgcg
     6721 ggtatgctag cgcggcgcat cataccctgt ctcgacgtgg cgggtggacg ggtggtgaaa
     6781 ggcgtgcact tcgaatcgct gcgggatgcc ggcgacccgg tcgagcaggc ttcccgctac
     6841 gatgccgaag gcgccgacga gctcgtcttc ctggacatct ccgccagccc tgaagctcgc
     6901 cggactacgc tcgagatggt gagccgggta gcggaaacga ttttcatccc gttcacggtg
     6961 ggcggcggga tccgttcggt tcccgatgcc gccgccgcgc tccgggccgg tgcggacaag
     7021 acggccgtga acaccgccgc ggtgcgcgat ccctcgctga tctcgcgcct ggccgagagc
     7081 ttcggcagcc aatgcgtcgt cgtggcagtc gacgtcaagc ggatcgggga ccggctgacc
     7141 gtgatggtca atggaggccg ggagcagacc tcgctggagg cggtggactg gagccggaga
     7201 ctcgaggccc tcggagccgg ggagatcctg ctcacctcca tggatcgtga cggcaccggc
     7261 caagggtacg atcttcccct gctcgaggcg gtgacccgga cggtaagcat tccggtgatc
     7321 gcgtccggcg gtgccggtag cctggcgcat ctggcggaag cgttcgaggc cggtgctcac
     7381 ggcgtgctcg ccgccaccat cttccatttc aaggactctt cgctcccccg agctcgcgcg
     7441 tatctgcgcg agcggggata tccggttcgc ccatgattct catcgcgctc gctgtcctct
     7501 ccgccttcac gctcacgccg tcgatcagtg gcggcgcacc atgcgtccga cccacccggg
     7561 ccggcaccca ggttcagggc gaggtgcgga tctgccccgg tcgttaccgg attccggacc
     7621 aggccgatca gggggtcatc atcatcgccg cgtcggggac gcgagtcgac ctcaccggcg
     7681 tggtgctcga gagcggggac tcggtgccag gccgcttcat cggggtgggc atcgccagcc
     7741 gtggggtgga tggggtcacc atcagtggcg gtgccattcg cggctaccgc tacggcgtgc
     7801 ggctggaagg cggccgcgcc catcgggtga ccgggtctga cctctcgggg agtcggaatc
     7861 ggggggtacg atccacaccg gcgcggccgg actcggcgga ccgcttggac ctgatccggc
     7921 cggacgtctt cgaggggtac ggcggaggca tcctgctccg gggaaccgtg gctgccagtg
     7981 tgatccgtgt gaccgcgcgc ggcgcccaga atggcatcgc gctgctggag gcgcgggaga
     8041 gctatatcgc ggacaacgac ctcgcctcga atgacggctg ggggatccac ctctggcgct
     8101 cctcgcgcaa tatcatcgcg cggaacaagg tggaccatac ccgccggtgc gagtctcagg
     8161 tgccggccgg cgagtgtggt gccgcggcgg tgctgctgcg tgacgcgagc gactcgaaca
     8221 ccatcgtgga caacgatctc acagcttcga gcctgggctt cttcctcacc ggggaacggc
     8281 ggcagggccg accatcggtg gggaacctgg tctaccgcaa cgacgcctca gacgcgctgc
     8341 gcaccggctt caccgccgcg ttcggctgga gcaacacctt cctggagaat cgggccgaca
     8401 gcgccggcat cgggtttcgg ctggaccact ccggcggctc cacgctgcgg ggaaataccg
     8461 tgatcggctc gcggacggtt gccatcgtga gtgatcatgg cgccgataac gccattctcg
     8521 ccaatgtgct catcggaggc gcggtgggca tcagggtcgg tgcacccgag gcgggcggcg
     8581 agccgagccg gcgctatcgc atcgacgaca acgtgctcgc ccgtctggac cagggcatcg
     8641 tggtcgagcg gaccacccgc gctcagctgc gcggcaatct gttcgatggg gtaggcgacg
     8701 ggctcgtgct ggacggggca ggccatgcca ctgaggtcac cggcaacatc ttccttcgcg
     8761 cctcccgctg gttcatcgag gcgcccgatc tggccgcggg agggaactac tgggccaccg
     8821 ccgacgcatc ggccgcaacc gcgaaggtga aagggaggat cagcgtcttg ccgtggaagc
     8881 cggcgagcgc ggcgggctac tgaaagattt ccatcgccac cgatttgagg tcccgaagat
     8941 tgaagggctt gctcacccgg cgcaggggat atccccccgg cccggccggg agctcctcct
     9001 cacgggagca ggccaccagc aaccggctcc ggacctcggg gcaggcgtcg agcagcgcgc
     9061 gcgcgaacgg ttccgaggtc cccgcggtca ccctcatgtc ggcaatgatc aggtcgtagg
     9121 ccccttcccg caccagcctc aatgcctgct tccccgagcg caccgctttg actgaatgcc
     9181 cgtcggaggc gaacagcgcg ctcagcagcc gatgaacggc cggatcctcg tccaccacta
     9241 gtatccggcg gcctgcgact acgctcgctt cgggggcagc ggcgtcctcc cgggggggct
     9301 ccagctcgta tagcggcagc gttactcgga actcggcgcc gccctctggc ggtggttcgt
     9361 aggtgagcgt acccccgtgt gccttcacca ggccgtagct caaggacaag ccgagtccgg
     9421 tgccctcgcc tggccccttg gtcgtgaaga agggggtgaa gaggtagggg gccaggtgct
     9481 tcggcactcc cagcccggtg tcgcgcaccc caaggatcgc ttcgccgttc gagcggatag
     9541 tcgacagggt gatgccacga ggcttccccg gttccagtcc ggcgacggcc tggacggcat
     9601 tggtgaccag gttcagcagc acctgctgga gctcgtagcg gtcacccagc acgatcaccg
     9661 gctcgggact caattcggag ctcagttcga ttccgtggag ctggagctcg tagacgatga
     9721 gcagggatgt ccgggagacc acgtcgttca ggtccacggc ggtctgttca ggcactccct
     9781 tgcgggcgaa ggtcaggaga ttgcgcacga tccgtccagc ccgctcggcc tgatcgtgaa
     9841 tgacgcgcag gtgctctcga ggcagctcgg ggtgtggggg tcgctccagc aggagctcgg
     9901 ccaggccggc gatggaggtg agagggttgt tcagctcgtg ggccacgccc gacaccagct
     9961 gcccgatcga cgccatcttg tcgttctgga tgatctgggc ttcgaggagg cgctgttcgg
    10021 tgacgtcctc gatcaggatc acgaccggtc ccggctccgc accggcgagg ggcgcggcgg
    10081 tcagccgtag cacccggttg ttgtgctcca gccggaccac cagcggaacg gtgcgctccc
    10141 cgcggtagga gacctcgatc aggccggata cggcctcggc cgcacccgag agcagctcac
    10201 gcaagttctg gccgaccagc tcgcgctcgg gcacctccac caacgccgcc aacgccaggt
    10261 tggcccggag aatggcgccg tcaggtccca ccacggcaat cccctcggcc agcgcgttga
    10321 aggtcgtctc ccactcttcc tcgctccggc gcaccatctc gtagaggcgg ctgttggcca
    10381 gcaccaccgc ggcattggtg gcgacagtcg acaagagccg gcgatcctca tcggtaaacg
    10441 gtccgccccg gcggtccgcg acggcgagag ctcccatggt aatgccctgg gccttcagcg
    10501 gggccaccgc ggccgaacgc accatgagac cgagcagatt cacagactgc gtgtcgccgt
    10561 tctgcgccac ctcgatccgg tcacgatcga tggcgacgcg cacaagtgcg gagcccggtt
    10621 cgtggctcac ctgtccccgc aacggaccga gcgatcccga ggcggcgacg acccggaggg
    10681 cgcggtcttc catctccacc agggccacaa ccgcgccatc cgcctggagg aatcgggcgg
    10741 cgtaccgcgc cacctggtcc acgatccggt cgggttgcat cgactccgag aggacgtagc
    10801 tcagctcctg aagagagaac agctcgctga tgcgacggtc cagctggatg gcgagctgat
    10861 cggctctcgc ctgggccttc cgtatctgag cacgggatcg gatcaccgcc accaagaagg
    10921 tggccccgat gccgagtgcg gcgaagaccg ccagccacca gaaccggtcc tgcgcccacc
    10981 acaggactcc cccgaggaga gccgcggcaa ccaagtggag agccagctcc caggtcgtgt
    11041 tccaactgga gatcagcaga aggatgacgg cgcaccccag cgcgactgct ggtgatacga
    11101 cggagttggt aaggacggcc gcggcaacca cacataccag gaccgcgccc gctgccacgg
    11161 cggcgatcaa cagctgcgaa cggctgctgc ggctggacag ctcagggctc ccgggagtcg
    11221 cggcgggcga ccctttccgt cacgtaggcc tcgggtgggg cattcggctt cacccggatc
    11281 gacttggccg ggatgcccac gttgacgtga tagggacgca cgtccttggt ggcgaccgca
    11341 ttggctccca ccatcgcatt ccggcctacc cgcacacccg cgaggacagt ggcgtggtag
    11401 gtaatgcgca cgtcatcttc caaaacggtg cgggcgttgg tgacgtcctt ctgatccacg
    11461 atgctgtggg tgtgactgta gatgttggcg tagtccgaga tgctcacccg attccccagc
    11521 gtgatgccgc cgcggtcgtc cagcagcaca ttccggtgca ccaccacgtc gtcacccacc
    11581 tcgagattgt acccgaagga aaactcgacg ttctgaaagc atttgaagtt cttgcccagg
    11641 cgagcgaaga tgtgcggcgc caggatccgc cggaatcgga taccgagatg cacgttgccg
    11701 ccgccgagaa gagatcggtc gaagctctgc cacagccaga gcaacggctt gacccgggcg
    11761 taccgctctg cgtcgacctc ggcgtagtac tccggctcga gggtgatgtt ccagggatcg
    11821 agcgagagca gggcgactcg gctggggtcc ggggtcctgg ggtcctgcag cagctcgtcg
    11881 tagtcctgga tgcccggata gtaaatctgg aacaggaggt cccgggtcag ccgctgccag
    11941 ttggcacccg gctcggcaag ttgggcc
//
LOCUS       DASYRV010000488         3701 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3011187, whole genome shotgun sequence.
ACCESSION   DASYRV010000488 DASYRV010000000
VERSION     DASYRV010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3701
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3011187"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VGQ24_13160"
     CDS             <1..180
                     /locus_tag="VGQ24_13160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455842.1"
                     /translation="IAAFVVASIEGSFGLAKGAQSAAMLRSNLEVLSSFLESLRPTPK
                     AGKTGSPRGPAARAR"
     gene            208..1071
                     /locus_tag="VGQ24_13165"
     CDS             208..1071
                     /locus_tag="VGQ24_13165"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEV8455843.1"
                     /translation="MIYLLAIGSALFYGAADFTGGLATRRAGAIPVVLLSQASGLVLL
                     ALILPLLPHASPSRADLLWGAVAGLTGGIGVALLYRALAIGRMAVVAPTTAVCAVTIP
                     VVVSVLLGERPLPLATAGIALGIVSIVLVSRHQAVAQADSDPTASRRPATGVGTAFAS
                     GVAIGFFFLSLAQTGPGAGMWPLIVARSVSVTLFGAVAIAGRRSIWMPAPVVTVVIGA
                     GIIDMVANALYMLAARQGPLSLVVTLSSLYPASTVLLARVVLGERLNPWQISGVGCAL
                     AAIVMIVSGAR"
     gene            1095..2645
                     /locus_tag="VGQ24_13170"
     CDS             1095..2645
                     /locus_tag="VGQ24_13170"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEV8455844.1"
                     /translation="MTTRYQAKSPQRPRVAPEKVGPHDLRYADLVRRGFNKRFVGKPD
                     YVRLVRSTEQVVDAVQDAVRDQLRVAVRSGGHCLEGFVADPAVRVVIDTSLMTGVSYD
                     QEMGAFAVEAGTTVGEAYQKLFLGWGVTIPAGESPDIGVGGHVSGGAFGFLCRQHGLA
                     ADHLYGVEVVVVDETGTARSVVATREPSDPNRDLWWAHTGGGGGNFGVVTRCWFRSPG
                     TSRQDPASLLPKAPDPVLAFRVTWNWEDIDEAAFTRLVRNFGDWCERNSDAASPYAKL
                     YTLLFLRRRQYGKLEMKGLSTAGTEAERLFDEHLAAINDGVGVPHAREVETSSWLDFA
                     LNPFPELFRVGTENALFKVKDAFLRRGFTDRQIEVAYDYLTRPDYDVPGGSLGLVTYG
                     GQVNTVAPDATASAQRDSILDTACSVGWQDPQDEARNLTWVRAFYRDLFSDTGGVPVP
                     GEVCDGAMINHPDVDLADPEWNTSGVPWHTLYYKDNYPRLERIKSCWDPRNVFHHALS
                     IRPVQGEP"
     gene            2642..3076
                     /locus_tag="VGQ24_13175"
     CDS             2642..3076
                     /locus_tag="VGQ24_13175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEV8455845.1"
                     /translation="MTTTTLAARWRSWAPNLLSVLRIVAAFLFMQFGSAKLLAIPAAV
                     MPGGGTAPLMSLPGFAGSLELVGGALLLLGLFTRPVAFLLSGEMAFAYFMGHAPQGFW
                     PVLNQGSPAILFCFIWLYISSAGPGPWSLDALRRGKTYERST"
     gene            3060..>3701
                     /locus_tag="VGQ24_13180"
     CDS             3060..>3701
                     /locus_tag="VGQ24_13180"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF006078.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HEV8455846.1"
                     /translation="MSAQPSTQAYPITPPIEPMLAKLADALPAAGNYLYEPKWDGFRA
                     IVFRGESDVYIQSRDLRPLDRYFPELHQALLERLPPGCVIDGEIVIRTPHGLDFDALQ
                     LRLHPAASRVAKLAKETPASFVGFDLLASDGQSRMKAPQGERRALLEQVLAGIDPPVY
                     LTPMTRDRDTAARWLDQFEGAGLDGVIVKPADSPYQPGKRAMIKVKHARTAECV"
BASE COUNT          600 a         1198 c         1217 g          686 t
ORIGIN      
        1 atcgccgcat tcgtcgtcgc ctccatcgag ggctcattcg gtctcgccaa gggcgcccaa
       61 agtgcggcta tgctacgctc caatctggag gtgctgagct cgttcctcga gagccttcgt
      121 ccgacgccga aggcgggcaa aaccggatcg ccgcgcgggc ctgcggcccg cgcgcgatga
      181 ctggctgacg gcatcgcgca ttgatcgatg atttacctcc tggcgatcgg ttctgccttg
      241 ttctatgggg ccgccgactt cactggcggc ctcgccaccc gacgcgccgg tgccatcccc
      301 gtagtccttc tctcccaggc gagtgggctg gttctgctcg cactgatcct gccgctgctg
      361 ccccacgcat cgccctcgcg ggctgatctg ctctggggtg ccgtggccgg cctgacgggc
      421 ggcatcggcg tcgcactact gtatcgcgcg ctcgcgatcg gaagaatggc ggtggtggct
      481 cccacgaccg cggtgtgtgc cgtcaccatt ccagtggtgg tatcggtgct gctgggcgaa
      541 cggccactgc ccctggcgac cgcaggaatc gccttgggaa tcgtgtcgat cgtgctggtc
      601 agccgccacc aggccgtggc acaggcggac agcgacccga cagcatcacg ccgacctgcc
      661 acgggggtcg gcaccgcgtt cgcctcaggc gtcgcgattg gcttcttctt cctgtcgctt
      721 gcccaaaccg gcccgggcgc cggaatgtgg ccgctcattg tcgcacgctc ggtttcggtg
      781 acactgttcg gggcggtagc gattgccggc cggcggtcca tttggatgcc ggcgcccgtg
      841 gtcacggtgg tcatcggagc cggcatcatc gacatggtag ccaatgcgct gtatatgctg
      901 gccgcgcggc aggggccact cagcctcgta gtaacgctat cgtcgctgta ccccgccagc
      961 acggtgctcc tggcacgggt cgtcctcgga gagcgcctga acccgtggca gatcagcggg
     1021 gtcgggtgtg cgctggcggc catcgtgatg atcgtaagcg gcgcccgata ggcgtcgccg
     1081 acaaacggag aaatatgaca actcgatatc aggccaagtc accccagcgc ccgcgagttg
     1141 cgccggagaa ggtcggaccg catgacctgc gttacgccga cctcgtccgc agaggattca
     1201 acaagcgatt cgtgggcaag cccgactacg tgcgcctggt ccgctccact gagcaggtgg
     1261 tggatgccgt gcaggacgcg gtgcgcgacc agctgcgcgt tgcggtgcgg agcggaggcc
     1321 actgcctcga gggctttgtg gccgaccctg cggtgcgggt ggtcatcgac acttcgctga
     1381 tgacgggcgt gtcctatgac caggagatgg gtgccttcgc ggtcgaggcc ggtaccacag
     1441 tcggcgaggc ctaccaaaag ctgttcctgg gatggggagt cacgatcccc gccggcgaga
     1501 gccctgacat cggggtcggt ggccatgtgt caggtggggc gttcggcttc ttgtgccgac
     1561 aacacggact ggcagctgac catctgtacg gcgtggaggt ggtcgtagtc gatgagaccg
     1621 ggaccgccag gagcgtggta gcgacgcggg agccgtccga cccgaaccgg gacctgtggt
     1681 gggcacacac cggcggcgga gggggcaact tcggcgtcgt cacccgctgc tggttcagat
     1741 cgccgggcac cagtcgccag gatccagctt cgctgctgcc gaaggcaccg gacccggtgc
     1801 tggcctttcg ggtaacgtgg aactgggaag acatcgacga ggcggcattc accaggctgg
     1861 tgcgcaactt cggagattgg tgcgagcgca acagcgacgc cgcgtctccc tatgccaagc
     1921 tgtacactct gctctttctc cgacgccgcc agtacggcaa actcgaaatg aaaggactgt
     1981 cgaccgccgg gaccgaggca gaacgcttgt ttgatgagca cctggccgcc atcaatgacg
     2041 gtgtcggcgt gccccacgcc cgcgaggtag agacgagctc ctggctggac tttgccctca
     2101 atcccttccc cgagctgttc agggtgggca cggagaacgc gctcttcaag gtcaaggacg
     2161 cgttcttacg caggggcttc acggatcgtc agattgaagt cgcctacgac tacctgacgc
     2221 ggccggatta cgatgttccc ggtgggtcgc tgggtctggt gacctacgga ggacaggtga
     2281 acacggtggc gccggacgcg accgcgtcgg ctcagcggga ctcgattctc gacaccgcgt
     2341 gttcggtggg ctggcaggac ccccaggacg aagcccggaa cctgacctgg gtccgcgcgt
     2401 tttaccggga cctgttcagc gatactggtg gggtgcccgt gccgggtgag gtctgcgacg
     2461 gcgccatgat caaccatccc gatgtcgacc tcgccgatcc ggagtggaac acctccggcg
     2521 ttccctggca tacgctttat tacaaggaca actacccccg gctggagcgg atcaaatcct
     2581 gctgggaccc tcgcaacgtg tttcaccacg ccctttccat ccgacccgta cagggggagc
     2641 catgaccacc accactctcg cggcgcgctg gcgttcctgg gccccaaatc tgctcagcgt
     2701 actccgcatc gttgcggctt tcctcttcat gcaattcgga tccgcaaagc tcctggcgat
     2761 tccagcggcc gtgatgccgg gcggcggtac ggctcccctg atgtcgcttc ccggctttgc
     2821 cgggtcgttg gagctggttg gtggcgcact cctgctgcta gggttgttca cccgaccggt
     2881 ggcgttcctg ctgtccggcg agatggcgtt tgcctatttc atgggacacg cgccacaggg
     2941 attctggcca gtgctgaacc agggttcgcc ggcaatcctc ttctgcttta tctggctcta
     3001 catatcctcg gctggaccag gcccgtggag cctcgacgcc ctccggcgcg gcaagacgta
     3061 tgagcgctca acctagcact caggcgtatc caatcacccc gccgatcgag ccgatgctcg
     3121 ccaagctggc agacgccctg ccggcagcgg ggaactatct ctacgagccg aaatgggacg
     3181 gattccgcgc catagtattc cgtggtgaat cggatgtgta catccagagc cgagatctcc
     3241 ggccgctcga tcgctacttc cctgagctgc accaagcgct gctcgagagg ttgccgccgg
     3301 gctgcgtgat cgatggagag atcgtcatca ggacgccgca cggactcgat ttcgacgcgc
     3361 tacagctgcg gctgcatcct gcggcgtcga gggtggcgaa gctcgcgaag gagacaccgg
     3421 catcgttcgt cggtttcgat ctgttggcat ccgatgggca gagccggatg aaggcgccgc
     3481 aaggtgagcg ccgcgcgctc ctcgagcaag tactcgcggg catcgatcct ccggtctacc
     3541 tcaccccgat gacgcgggac cgcgataccg cggcccgctg gctcgaccaa ttcgagggcg
     3601 ccggcctgga cggcgtgatc gtcaagccgg ccgacagtcc ctaccaaccc ggcaagcgcg
     3661 cgatgatcaa ggtgaagcac gcgcgcaccg ccgaatgcgt t
//
LOCUS       DASYRV010000489         2548 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3722677, whole genome shotgun sequence.
ACCESSION   DASYRV010000489 DASYRV010000000
VERSION     DASYRV010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2548
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3722677"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1794..2234
                     /locus_tag="VGQ24_13185"
     CDS             1794..2234
                     /locus_tag="VGQ24_13185"
                     /inference="COORDINATES: protein motif:HMM:NF019352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEV8455847.1"
                     /translation="MTPPLQPPLMPFVDALPLPRRILASKHGGELTVRIRAAVHRLHR
                     DLPESRVWAYDGQVPGPTIEAERGRPVRVYWRNEIEQPYPVVSTLAPTGTDGDGVPVQ
                     CLPCLSGGTPGPERRRVERLHRRSSARCPDSRSLRRLDGEPPSS"
BASE COUNT          452 a          841 c          817 g          438 t
ORIGIN      
        1 tcgcgctgct cgtcctgtcg gtagcgagcg cctcgtcgaa ctcctgtacc gcttcattca
       61 tgaggtagag cgtgagtctc cgagccgcca tgcctgagtc ccctcctctg cgtatgctcc
      121 gccgatagtc ctacacatcg ctcatcgtgc catcaccctc atgatgggtc taccatcagt
      181 taaagtgtga tggtggcaca gtcggacgag ctgatcgcag agttcaacca ggtacggggc
      241 gtaccgttcc ccgggtcgcg tcaggcgcaa gagcgcccgt ggagcatcgc ttgccatgcg
      301 gtgaacgagg ccgcgccgcg aggcacgagc tggagtgacc ccctcgggtc gttcttctac
      361 acaacgccgt atcacacgga cttcgacccc gattggccga tccagatcga ctggccaacg
      421 gtagtaaggg gactacgctc ctcattgcac gcaagtcaga cacagttcgc agagctatgc
      481 atgctgggcc gggccacggt cgaacggtgg gaatcaggaa ggaccaaacc cttcaggggg
      541 aacccgctgc agttcttatc gttggttcgc ccacacgtgg ccacgccagt gcaagccgga
      601 cagttactca atctggctgc ggccggggtg cttccccggc tgactagacc aacagccgaa
      661 tattcgggca tcgagatagc gtcgtggctc aggtccggca atgatgatca cactgacctg
      721 gctgatcctc tattgcaggc actcgtcgct gcacgcatca tcatcccaat cgccccgtcc
      781 ggaaacggcg ccctcgggga cacgtacttc ccgctggcgg gtcgcttccg tgatcccgcg
      841 ccgctcccag ggtgggcagg ggccctgatt acagacgtcg agagcctgac gcaacaagat
      901 cgcgagcttg tccagaccct ggctcggcgg ttggcagcga aaccccagtg atcttcaggt
      961 gagcgttcct agaacgctcg agttcgacga agtggttcta agagctggta ctaagagctg
     1021 gtacctggga gcgcctacat tttggatcgc aacgctgcat cccagccgac ccgaacggca
     1081 gccatggctg gcagagcggc gtcacactgg gcggaatgac gcgaccgcac atcgcctgat
     1141 cgctcacatc gcggcgtggc cggttgtcat gcggtcggta gcgagctctg tgggcctgtc
     1201 cgcagtcgtc accgactcga tcgggcgggc gcgaccagcg gcgccacaca tcgaaaccca
     1261 cgtcggaaat cactgttaag cgaggcacat ttcctacgct cgatgcatgc tgatcggcta
     1321 tgcgggggtg tccaccaggg accaaaaccc cgacgggcag ctagacgctc tggccgccgc
     1381 cggcgtcgag ccgcggcaca cctacgtgga catggcctcg ggcacccttg gagcggcggc
     1441 cgcagttcga cgcggccctc aggcatctac cgatggccag ctcggtgaag cacctgtgca
     1501 cgatcggtcg cggccggcgc attcttcttc cgatccgagc tccgccgggt gttcgatcgg
     1561 atcacccgcg ccaaagccgg gggagtcgaa gtggaactcg gtccgctcga tcgcaaagtc
     1621 gtaggcatcg tcgcggagag cgaggagcgg tcctgatgct cggcgcctgc tggccctggc
     1681 cggtccgcag gatgatcctg ttaccttgaa gcaatccatc agcgccgatc acgagcgccg
     1741 gcccgctcga ggggttgacg gatcggcccg tcccgaggag gtggcgaggg accatgacgc
     1801 cgcctctcca gccgccgctg atgcccttcg tcgacgcgct gccgctgccg cggcgcatcc
     1861 tggccagcaa gcacggcggg gagctgaccg tgcgcatacg cgcggcggtg caccggttgc
     1921 accgcgacct gcccgagtcg cgggtatggg cgtacgacgg ccaggttccg gggccaacga
     1981 tcgaggccga gcgcggccgg ccggtgaggg tctactggcg caacgagatc gagcagccgt
     2041 atccggtcgt gagcacgctc gcccccaccg ggactgacgg tgacggcgtc cccgtccaat
     2101 gcctgccctg tctgagcggc ggcacgcccg gacccgaacg ccgccgcgtt gagcggctac
     2161 accgtcgttc atctgcacgg tgccctgact ctcgctccct acgacggctg gacggagaac
     2221 caccttcgag ctgacgcccg cttctcgcgg aagccggagc ctgcgccgcg gactgactcg
     2281 gtcccggttc ccatgcaaaa tggggtatcc gattagatgc tccctgcggt ggaggtctcg
     2341 tgtggctcca gggggccggg cgccgatcga taggccgagg ctatcgctgg cgtgggagag
     2401 aagtctgcga cgccgcgccc cacgcgacta gcgtttacag gctgctcaag tttcaggacg
     2461 aaggagagcc atgaaagtcg cactcaccgg cgcaacggga ttcatcggat cccacgtcct
     2521 ggcgcaattg acggaccacg gccacgag
//
LOCUS       DASYRV010000490         5372 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_4138246, whole genome shotgun sequence.
ACCESSION   DASYRV010000490 DASYRV010000000
VERSION     DASYRV010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5372
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4138246"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..746)
                     /locus_tag="VGQ24_13190"
     CDS             complement(<1..746)
                     /locus_tag="VGQ24_13190"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEV8455848.1"
                     /translation="MRYRLVSLAVAFLILLSLTGLSNATAQGVPGTGTISGRVVDDEG
                     TAVVGAQVFINPSIGTLTRANGQYVLPRVPAGTHTLHARLLGLRPEAASVTVSANQTT
                     TQDFTLRRDPLQLQTMVVTGTQSPRTNLDASVAVTTLTATEIQAAAPRSTTEMLRYVP
                     GFTRVESSGGEVNENITMRGILGVEYVAFLEDGLPVFPTMHTFFMNADNLFRFDTNIE
                     RMEVVRGGSSPLFGSNTPGAIVNFINKTGG"
     gene            complement(1010..1303)
                     /locus_tag="VGQ24_13195"
     CDS             complement(1010..1303)
                     /locus_tag="VGQ24_13195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455849.1"
                     /translation="MGGAAGLDVRLPIGGLFTVLGIMLSGYGLIVGSGSASLSAGSST
                     NVNLWWGLVMLVFGVLLLLGAGLAQRKLSVRPATETIEGQSTEKREHGLGLEG"
     gene            complement(1313..3076)
                     /locus_tag="VGQ24_13200"
     CDS             complement(1313..3076)
                     /locus_tag="VGQ24_13200"
                     /inference="COORDINATES: protein motif:HMM:TIGR00813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter family protein"
                     /protein_id="HEV8455850.1"
                     /translation="MESNPVTHLAPIDYAVMVVYFAAVLGVGWSLRRAMRTSTDFFLS
                     GRSLSPWITGVAFISANLGAQEVIGMGASGAKYGIATSHFYWVGAIPAMVFVGLFMMP
                     FYYGSRARSVPEYLRLRFDEKTRTLNAVSFAVMTIFSSGVSMYAMGKLLNLLLGWSFD
                     VSIIVAAVIVLAYVLLGGLTSAIYNEVLQFFLIVFGFAPLVALGLHAVGGWDGLTARL
                     AEVATTRGLPTNAYTSSWANMGEAVRNPIGVEWFGLVMGLGFVLSFGYWCTDFLVVQR
                     AMAADSMTAARRTPLIAAVPKMLFPFLVILPGMIALVLGAEHAAGIGQGLVPAKLAAN
                     GAPLLDGSGRVVLDYDLATPMMLVRLFPAGMLGLGLTALLASFMSGMAGNVTAFNTVW
                     TYDIYQSHIRRGASDAHYLWMGRLATVGGILLAIAAAYVASAFNNIMDLLQLVFAFVN
                     APLFATFALGMFWRRTTGHGAFAGLLAGTLAAAIHHGLTLPAGTHPGVKGGFLGVLHM
                     YPSELAQTFWTAIMAWTTCFVVTIVVSLATRPRLPDELRGLVYSLTPRPSDRALPWFR
                     RPWTLAVLVLALTVALNLVFF"
     gene            3075..4766
                     /locus_tag="VGQ24_13205"
     CDS             3075..4766
                     /locus_tag="VGQ24_13205"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEV8455851.1"
                     /translation="MLRQKVLHRGDRGGMSRIYYFPACLRKGVLRGVGIRPPCDSGVV
                     QGAPPSVSAEAKTEQWMLVASILGSSMAFIDGTVVNVALPVLQKALGATATQVQWVVE
                     SYALALAALLLLGGALADKVGRRRIFAVGVALFALASAGCALAPNINWLIATRAVQGL
                     GGALLVPTSLALLGAGFPAERRGQAIGKWSAFSAAAAGVGPVLGGWLIQAASWRWVFW
                     INIPIALAALTITLRWVPESRDEKARRLDLPGAALATLGLGGLVFGLLEAPRLGLDHA
                     AILTGLLGGALTLAIFVLVEERSPEAMVPLDLFRSRTFAGANLLTLLLYAALGGAFFF
                     VPFDLIQVHDYSPAAAGAAMLPLIVLLSLLSSWAGRLADRYGVRRPLIIGPMIAAAGF
                     ALLALPGTGGSYWTTFFPGMVVLGLGMSGTVAPLTTAVMTSVGPDRAGVASGINNAVS
                     RTAALLSIAAFGLVAYQRFGRSLAHRMATLGVPSEAREQLWRERGKLAALTIPHSLPD
                     QLRSSLELAVSAAFVDAFRAIMLLAAGLAVVGAAISWLMIDGEPDRSPPPPAQRT"
     gene            complement(4754..>5372)
                     /locus_tag="VGQ24_13210"
     CDS             complement(4754..>5372)
                     /locus_tag="VGQ24_13210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455852.1"
                     /translation="SPMRNARHASAALAALALLGCGESASRTTQPSEAVELSHRVHQA
                     SGGYHFLIPADFNGGIFGGAVDNRLTFDAHRDAEGNVSGSWNYEQTDFGTAGIPYSYK
                     GSVTCFKVYDTPVLQRFPDVPPMVGNRAKWGGPIEATNDPTVPVGTFAWFQSIDNGEG
                     GNEGPDVSTIFGLGDETANEAFCNVANVPNPNFGPHAVEGNIQVR"
BASE COUNT          923 a         1737 c         1799 g          913 t
ORIGIN      
        1 tcgccgccgg tcttgttgat gaagttgacg atggcccccg gggtgttgga gccaaacagc
       61 ggagagctgc cgccgcggac cacttccatc cgctcgatgt tggtgtcgaa gcggaaaaga
      121 ttgtccgcgt tcatgaagaa ggtgtgcatt gtggggaaga ctggcaaccc gtcctcgagg
      181 aaggcgacgt attccactcc gaggatgccg cgcatggtga tgttttcgtt gacctcaccg
      241 cccgagctct ccacccgggt gaagcccggg acgtagcgaa gcatctcggt ggtgctccgg
      301 ggcgcggccg cttggatctc cgtggccgtg agcgtggtga ccgcgacgct cgcgtccaga
      361 ttcgtccgtg gcgactgggt tccggtgacc accatggtct ggagctggag cggatccctg
      421 cgcagcgtaa agtcctgcgt ggtcgtctga ttggcggaca ccgtgacgct tgccgcctca
      481 ggccgcaagc cgagcaggcg cgcatggagc gtgtgggtgc ccgcgggcac ccggggaagg
      541 acatactgcc cgtttgcccg tgtcagggtg ccgatcgatg ggttgatgaa cacctgtgcg
      601 ccgacaacgg cggtgccctc atcgtccacc actctgccgc tgatggtgcc ggtgcctggc
      661 actccctggg cggtcgcatt cgagagaccg gtaagtgata gcaggatgag gaaggcgact
      721 gccaggctga cgaggcgata cctcatagcg gcatcctcca ttttttctta tgggttccgc
      781 gagcgagcga aggaacacag cgaacctgcg ggaggacccc agcggcggac aggcccgcag
      841 cgtgcggccg ggtgaagcga actcaagggg agccaagctg gtatttgcac gacgcaattc
      901 cgaccgcgag atagcggctg tcgcaactgc cactggggtc gtcatgactt acaacccgcc
      961 gggcgcatgc gcaagagggg catgcactgc gggagccggc agcggctatt cagccctcca
     1021 gacccagtcc atgctcgcgc ttctcggtgg actgtccctc gatagtttcc gtggcgggac
     1081 gcaccgacag cttgcgttgg gccaggcccg cgccgagcag caggagcact ccgaacacca
     1141 gcatgaccag cccccaccac aagttgacgt tcgtcgagct ccctgccgac agagatgccg
     1201 agccgctgcc gacgatcagg ccgtatcctg aaagcattat tcccaggacg gtgaaaagcc
     1261 cgccgatcgg caagcggaca tcgagaccag ctgctccacc catgagtcct ccttagaaaa
     1321 acaccaggtt gagggcgacc gtgagcgcga gcacaagcac ggccagtgtc cagggccgcc
     1381 ggaaccaggg aagggcacga tcgctgggtc ggggagtgag cgagtacacc agcccccgca
     1441 gctcgtctgg caacctgggc cgggtcgcga ggctcacgac aatggtgacc acaaaacacg
     1501 tcgtccacgc catgatggcg gtccagaacg tctgggccag ctcgctcggg tacatgtgca
     1561 gcacgccgag gaacccgccc ttcacgccgg ggtgggtgcc ggccgggagc gtgagcccgt
     1621 ggtgaatggc ggccgccagc gtgccggcca ggaggccggc gaacgcccca tgccccgtgg
     1681 tgcgtcgcca gaacatgccg agcgcgaacg tggcgaagag aggcgcgttc acgaaggcga
     1741 agacgagctg cagaagatcc atgatgttgt tgaacgcact cgcgacatag gccgccgcga
     1801 tggcgaggag aatgccaccg accgtggcca gccgccccat ccacaaatag tgcgcatccg
     1861 aggcgccccg ccggatgtgg ctctggtaga tgtcataggt ccacaccgtg ttgaaggcgg
     1921 tgacgttccc cgccatgccc gacatgaacg aagcgaggag cgcggtgaga ccgagtccca
     1981 gcatcccggc cgggaagagc cgcaccagca tcatcggggt ggcgagatca tagtccagga
     2041 ccacgcgtcc ggagccatcc agcagtggcg cgccgttggc cgcgagcttg gccgggacca
     2101 ggccctggcc gatcccggcg gcgtgctcgg cgccgagcac cagcgcgatc atccccggca
     2161 ggatcaccag aaacggaaac aacatcttgg gcactgcggc aatgagcggg gtgcggcgcg
     2221 cggcggtcat cgagtcggcc gccatggccc gttgtaccac caggaagtcg gtgcaccagt
     2281 agccaaacga caagacgaag ccgagaccca tcaccagccc gaaccattcg accccgatcg
     2341 ggttacggac cgcctcgccc atgttggccc aggagctggt gtaggcgttg gtcggtagcc
     2401 ctcgcgtcgt ggcgacctcc gccagccgtg ccgtgaggcc gtcccaacct ccgaccgcgt
     2461 gcagaccgag cgccaccagc ggcgcgaatc caaagacgat caggaagaac tgcaggacct
     2521 cgttgtagat cgcgctggta agtccgccca gcagaacgta ggccagcacg atcacggccg
     2581 cgacgatgat gctgacgtcg aagctccacc cgagtagcag attgagcagc ttgcccatcg
     2641 cgtacatcga caccccggac gaaaagatcg tcatcacggc gaaggagacg gcattgaggg
     2701 tacgggtctt ctcgtcgaat cgaaggcgga ggtactcggg aacggagcgg gcgcgggagc
     2761 cgtagtagaa cggcatcatg aacagcccga cgaagaccat cgccgggata gcgcctaccc
     2821 agtaaaagtg gctggtggcg atgccgtact tggcgcccga ggcgcccatg ccgatgactt
     2881 cctgggcgcc gagattggcc gagatgaagg cgacgccggt aatccagggc gagagcgagc
     2941 ggccggagag aaaaaaatcg gtgctggtcc gcatggcccg gcgaaggctc catcccacgc
     3001 cgaggacggc cgcgaaatag accaccatga ccgcgtagtc tatcggggca agatgggtga
     3061 caggattgga ttccatgcta cgtcagaagg tactgcaccg tggagaccgt ggcggcatgt
     3121 cgcgaatcta ctactttccc gcttgcctca ggaagggagt actccgtggg gtaggaattc
     3181 gtcccccctg tgactcgggc gtggtacagg gcgcgccacc gtcggtatct gccgaggcaa
     3241 agactgagca gtggatgctc gtcgcgagca tcctcggctc cagcatggcg ttcatcgatg
     3301 gcaccgtcgt caatgtcgcc ctgcccgtgc tgcagaaggc gctcggtgcc accgcgaccc
     3361 aggtgcagtg ggtggtggag agctatgcgc tcgcgctcgc ggcgctgctg cttctcggcg
     3421 gcgcgctggc agacaaggtg ggccgccggc gcatctttgc agtcggggtc gcactctttg
     3481 ccttggcgtc ggctggatgt gccctggctc cgaacatcaa ctggctcatc gccactcgcg
     3541 cggtgcaggg gctcggtggc gcgctcctgg tccccaccag cctggctttg ctcggtgccg
     3601 gattcccggc agagcgccgg gggcaggcga tcgggaagtg gtcggccttc tccgccgcgg
     3661 ccgccggcgt gggcccagtc ctcggcggct ggctgatcca ggcggcctca tggcgttggg
     3721 tgttctggat caacatcccg atcgcccttg cagccctgac catcaccctg cggtgggtgc
     3781 cggagagccg ggacgagaag gcgcgccggc tcgatctgcc gggagccgcc ctcgccacct
     3841 tgggcctggg tggcctggtc tttggtttgc tcgaagcgcc gcgactgggc ctcgatcacg
     3901 ccgctatcct caccgggctc ctcggcggcg cgctgacgct ggccatcttt gtgctggtcg
     3961 aggagcgctc gcccgaggcg atggtgccgc tcgacctgtt ccgctcccgg acgttcgccg
     4021 gcgccaacct cctcacccta ctgctctatg ctgcgctcgg cggcgcgttt ttcttcgtcc
     4081 ccttcgacct gatccaggtc catgattact ctccggccgc ggcgggggcg gccatgctcc
     4141 cgctgattgt gctcctatcg ctgctctcca gctgggccgg ccggctggcc gatcgctacg
     4201 gagtcaggcg tcccctcatc atcgggccga tgatcgcggc cgcaggcttc gccctgttgg
     4261 ctctgccggg gaccggcggc tcatactgga ccaccttctt cccggggatg gttgtactcg
     4321 ggttggggat gtcggggacc gtggccccgc tcacgaccgc ggtcatgaca tccgtcggtc
     4381 cggatcgagc gggcgtggcc tcgggcatca acaacgcggt ctcgcgcacc gcagcgctgc
     4441 tctcgatcgc tgccttcggc ctcgtcgcct accagcggtt cggccggtca ctggctcacc
     4501 ggatggccac gctgggcgtt ccgtccgagg ctcgcgagca gctctggcgg gaacgaggaa
     4561 agcttgcggc cctcaccatc ccccattcgc taccggatca gctgcggagc agcctggagc
     4621 tggcggtaag cgccgccttc gtggacgcct ttcgagccat catgctgctg gccgccggcc
     4681 tggccgtggt aggcgccgcg atctcgtggt tgatgatcga cggagagccg gatcgctcgc
     4741 ccccgccgcc cgctcaacgc acctgaatgt tgccctcgac ggcgtgtggt ccgaaattgg
     4801 ggttcggaac gttggcaacg ttgcagaagg cttcgttagc ggtctcgtct cccaggccga
     4861 agatcgtgct cacgtcaggg ccttcgttcc cgccttcccc gttatcgatc gactggaacc
     4921 aggcaaaagt gcccacgggc accgtcggat cgttggtcgc ctcgatcgga ccaccccact
     4981 tggcccggtt acctaccatt ggtggtacgt cggggaagcg ttggagtacg ggagtgtcgt
     5041 agaccttgaa gcaggtcacc gatcccttgt agctgtacgg aatgccggcg gtgccgaagt
     5101 cggtctgctc gtagttccag ctaccgctca cgttgccctc tgcatcccgg tgggcgtcga
     5161 atgtcagccg gttgtccacg gcgccgccaa agatcccgcc gttgaaatcg gccggtatga
     5221 ggaagtgata gccacccgag gcctggtgca cccggtggct tagctcgacc gcctcgctcg
     5281 gttgggtcgt tcgactcgct gactcaccgc accccagcag ggcgagagcg gccagtgcag
     5341 ctgacgcgtg gcgcgcgttc ctcatagggg ac
//
LOCUS       DASYRV010000491         2834 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_410151, whole genome shotgun sequence.
ACCESSION   DASYRV010000491 DASYRV010000000
VERSION     DASYRV010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2834
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410151"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..1144)
                     /locus_tag="VGQ24_13215"
     CDS             complement(110..1144)
                     /locus_tag="VGQ24_13215"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEV8455853.1"
                     /translation="MTASRSGATSERLKLGIVGGGAITQVAHLPVLKKMRGVEVQAIC
                     DTDLPKARALATRFGIKDAFDDIEELLRYEALDAVVICSPNHLHESHIQAALSANLHV
                     LVEKPLAMSAVSVQRVLRAVEKHDRVLMVGMNHRYRPDVQIVRSFVQSGELGTIESIR
                     GSWHVFRPSRAQLGWRQRRDEAGGGAMLDLGLSILDLGLWLGASSPPARVSASLDPLG
                     KDRSVEQSGSAFVVCENGMSIFVDVTWRHLGEGERFGVGLRGSKGTAGINPLNVWKEL
                     HGVAVDVSPTGSVSRENAFTASYRAEWAHFQAAIAGDAKVPSLQEHLTLHKVVDAIYR
                     SAFDGRDVTL"
     gene            complement(1158..2390)
                     /locus_tag="VGQ24_13220"
     CDS             complement(1158..2390)
                     /locus_tag="VGQ24_13220"
                     /inference="COORDINATES: protein motif:HMM:TIGR02669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIID/LytB domain-containing protein"
                     /protein_id="HEV8455854.1"
                     /translation="MALLLLAPASCVSGPRPTAPTAGLPMPAGRDPEIRVGLVVGAGS
                     VGVGGGAALAVTAPDGSHLWMIPPGETWHAAVAGNGFTLGSRGWTSAPLEAVTLTPVE
                     SNPLVRVNGRSYRGSVVILRGGTGITVVNRVGLESYLLGVVSAEMGRRGPAEQAALRA
                     QAVVSRTYALRNLGRWKAQGFDLAATVAAQVYSGQGAETPEGHAAVRDTRGRVLTYEG
                     ALIEAFFYSTCGGRTADGFEVFRGAARPYLRSIPDQADNGSVYCSISPRYRWHEEWTG
                     EALQSTLQRNLPPVAGARSVDVREVSNVRVTRRSSSGRVDQLAIELGGPEIRVEGPEI
                     RQVMRLSSGEPLRSTAFDLVATVAGHRVTHLAVDGMGSGHGVGFCQWGAVGRARAGQG
                     YEQILAAYFPRTRLERRY"
     gene            complement(2416..>2834)
                     /locus_tag="VGQ24_13225"
     CDS             complement(2416..>2834)
                     /locus_tag="VGQ24_13225"
                     /inference="COORDINATES: protein motif:HMM:NF003819.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HEV8455855.1"
                     /translation="AQRYDFKGTHCEVTFDRLKAEIRLSADDEYRMEALVDVLKTKMI
                     KRGVPVKNLKLGDIEPAAGQSVRRTLTLTQGIPQDVSKRIVKAVKDQGFKKVQAAIQG
                     DEVRVTAPSRDELQAVIAFLKGQDFQIELKFGNYRG"
BASE COUNT          461 a         1022 c          861 g          490 t
ORIGIN      
        1 gcctcctggg cggctgcgat cccagcgacc gcggaaagca agagagtcac accgatccgc
       61 ctcgccattt tcctgcttcc ccgcttcccc acttccccgc ttcctcgctt cacagcgtca
      121 cgtctcgccc gtcaaacgcc gagcgataga tcgcatccac taccttgtgc agggtgagat
      181 gttcttgcag cgatggcacc ttggcgtcgc ccgcgatcgc cgcctgaaag tgggcccact
      241 cggcccggta gctcgcggtg aaggcattct cccggctgac cgacccggtc ggcgacacgt
      301 ctacggccac gccgtgcagc tccttccaga cgttgagtgg attgatcccc gctgtcccct
      361 tgctgccccg aaggccgact ccgaaacgct ccccttctcc cagatggcgc caggtgacgt
      421 ccacgaagat cgacatgccg ttctcgcaga cgacgaacgc gctgcccgat tgctctaccg
      481 agcggtcctt gcccagcggg tccaggctgg cgctgacccg ggcgggaggc gagctggcac
      541 caagccagag gcccagatcg agaatcgaga gtcccagatc gagcattgct ccaccacccg
      601 cctcgtcacg ccgctggcgc cagcccaact gggcccggct cggtcgaaac acatgccagc
      661 tgccgcggat gctctcgatg gtgcccagct cgccactctg gacgaagctg cggacgatct
      721 ggacgtccgg gcggtagcga tggttcatac ccaccatcag cacgcgatcg tgcttctcga
      781 ccgcacggag gacgcgctgc acgctcacgg ccgacatcgc cagcggcttc tccaccagca
      841 cgtgaaggtt ggccgagagc gcggcctgaa tgtgggactc atggaggtgg ttgggcgagc
      901 agatgacgac cgcgtcgagg gcctcgtacc ggagcagctc ctcgatgtcg tcgaatgcgt
      961 ccttgatccc gaagcgcgtc gccagggccc gtgccttggg caagtcggta tcgcagatgg
     1021 cctgcacctc gacgccccgc atcttcttca gcaccggcag gtgcgccacc tgcgtgatcg
     1081 ctccgccgcc gacgattccc agcttgaggc gctcgctcgt agctccgctg cgactggcgg
     1141 tcatggtgct ctcctcatca atagcggcgc tccaaccggg ttctgggaaa gtaggccgcg
     1201 agaatctgct cgtatccttg gcccgctcgc gcgcgtccca cggctcccca ctgacagaat
     1261 ccgacgccgt gccccgatcc catgccgtcc acggcgaggt gggtcactcg gtggccggcg
     1321 acggtggcga ccaggtcgaa tgccgtgctc cggagtggct cacccgagct gaggcgcatc
     1381 acctgccgga tctctgggcc ctcgactctg atttccggtc ctccgagctc gatagcgagc
     1441 tgatcgaccc gccctgacga gctacggcgg gtcacccgca cgttgctgac ctcccggaca
     1501 tccacgcttc gcgctccggc gactggcggc aggttccgtt gcagggtgct ctgaagcgct
     1561 tcgccggtcc actcctcgtg ccagcgatac cggggggaga tactgcaata gacactcccg
     1621 ttgtccgcct gatcggggat cgatcgaagg tacggcctgg ctgctccccg gaagacctcg
     1681 aagccgtcgg cggtacggcc cccgcaggtg gagtagaaga aggcctcgat cagcgccccc
     1741 tcataggtga gcacccggcc tcgggtatcc cgcacggccg catgtccttc gggtgtctcc
     1801 gctccctgtc cactgtagac ctgagcggcg acggtggcgg ctaggtcgaa gccttgcgcc
     1861 ttccagcgac ccaggttccg cagcgcgtag gtgcgcgaca cgactgcctg cgcgcggagc
     1921 gccgcctgct cggccggccc gcgccgtccc atttcggccg acactacgcc cagaaggtag
     1981 gactcgaggc cgacccgatt gacgaccgtg atgccggttc caccgcgcag gatcaccacg
     2041 gacccgcgat aactcctgcc gttcacccgg accagcgggt tcgactccac cggtgtgagg
     2101 gtcacggctt ccagcggcgc ggaggtccag cctcggctac ccagagtgaa gccgttgccc
     2161 gccaccgcgg catgccaggt ctcccccggg ggaatcatcc acagatgcga tccgtcggga
     2221 gcagtgacgg cgagcgccgc accaccgccc accccgacgg aacctgcacc aactaccagg
     2281 ccgacccgaa tctccgggtc gcggccagcc ggcatcggaa gcccggccgt cggcgcagtc
     2341 ggcctcgggc ccgacacgca gctcgccggc gccagcagca ggagcgccat accgagccgc
     2401 ctcaaagtct gcgcctcagc cgcggtagtt gccaaacttg agctcgatct ggaagtcctg
     2461 gcctttgagg aaggcgatca ctgcttgcag ctcgtcgcgt gagggcgcgg tcactcgaac
     2521 ttcatcgccc tgaatggccg cctgtacctt cttgaatcct tgatccttga ccgccttgac
     2581 gatccgcttc gacacatcct gcgggatccc ctgggtaaga gtgagtgtgc gccgcacact
     2641 ctggccggcc gcgggctcga tatcgccaag cttgaggttc ttcaccggca cgccgcgctt
     2701 gatcatcttg gtcttcagca catcgaccag tgcctccatc cggtactcat catcggcact
     2761 cagccggatc tcggccttga gccggtcgaa ggtcacctca cagtgagttc ccttgaagtc
     2821 gtaccgctgg gcga
//
LOCUS       DASYRV010000492         3039 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_613573, whole genome shotgun sequence.
ACCESSION   DASYRV010000492 DASYRV010000000
VERSION     DASYRV010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3039
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_613573"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..581
                     /locus_tag="VGQ24_13230"
     CDS             <1..581
                     /locus_tag="VGQ24_13230"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8455856.1"
                     /translation="ATVYGIIKQTGGYVWVYSEPGQGTTFKVYLPVDEGSVQVAAASS
                     PPVQASGERVLIVEDEPAVRYMMSRALKVHGYNVLEASDGPEALRLVEGANGVLDLII
                     TDVMIPGLDGMELARRAARIAPDLPILFMSGYTDHDIVRRGLLDPNQPFLQKPFTPDA
                     LVRRVAELLKHKKPAHAAAAQPTGRSSPTTAD"
     gene            complement(565..1026)
                     /locus_tag="VGQ24_13235"
     CDS             complement(565..1026)
                     /locus_tag="VGQ24_13235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455857.1"
                     /translation="MGASRQVLVRILAALGVALALPGVAESQVGISSGVAQIALVAHV
                     APRGSIQDVSAERETGRMGSVREASVTVRVAANTGYQLVVRGTAVAASRIWVRGVNGE
                     FQELTAGSSVTVARGTHAAGQWDREVQYRIESAGDLNSLPVRYEIALSPQL"
     gene            1458..1847
                     /locus_tag="VGQ24_13240"
     CDS             1458..1847
                     /locus_tag="VGQ24_13240"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8455858.1"
                     /translation="MTPAPTQRILVVDDDASIRRTLNILLSKAGYEVIQASDGSEAVR
                     LWRDRGGDLVITDLHMPEKDGIETIIELLSHTPGMSIIAMSGGGQTKRLDLLGNVALL
                     GSILTIEKPFTLAEMMAMVNRALKPIH"
     gene            1915..2319
                     /locus_tag="VGQ24_13245"
     CDS             1915..2319
                     /locus_tag="VGQ24_13245"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8455859.1"
                     /translation="MIPTVLVIEDNPLNLELVRDVLMAAGMKVVEARTAQEGLRAASE
                     LKPNLILLDIRLPGMDGFAVLGRLKADSATASIPVVALTAQAMVGDREQALAAGFDEY
                     IPKPIDTRTLADTVRALLDPARHRRSAHGEAS"
     gene            2352..>3039
                     /locus_tag="VGQ24_13250"
     CDS             2352..>3039
                     /locus_tag="VGQ24_13250"
                     /inference="COORDINATES: protein motif:HMM:NF017077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE3 domain-containing protein"
                     /protein_id="HEV8455860.1"
                     /translation="MAINLGFAVVILLLGSAGWITYRASVEALTSARWVSRTHQGLEG
                     LRQVLSSLQDAETGQRGYIISGDERYLGPYTEGVKQIRDQIAELRRLVVDSAQQRRLG
                     SLESLAARRVDVVAEGIVARRERGREAGIAFVLTGRGKALMDSVRVLVGEVETAQRDL
                     LRIRSERSEALARRTELTILLATGLGLLLLATSAILANREIQARMKAEAGVRLVNEKL
                     EDRVAERTEEL"
BASE COUNT          583 a          940 c          978 g          538 t
ORIGIN      
        1 tggccacggt ctacggcatc atcaagcaga ctggcgggta cgtttgggtg tacagcgagc
       61 cgggtcaggg aacgactttt aaggtatatc tgccagtgga cgaggggtcg gtacaggtgg
      121 cggctgcttc ttcacccccg gtccaggcat cgggagagcg ggttctcatc gtcgaggacg
      181 aaccggcggt gcggtacatg atgtcccgtg cgctgaaggt gcatgggtat aacgttctcg
      241 aggcgagtga tggcccggag gctctcaggc tggtcgaagg tgccaacggg gtactcgatc
      301 tcatcatcac cgacgtcatg atccccggac tcgatggcat ggagctggcg cggcgggcgg
      361 ccaggatcgc acccgacttg ccgattctgt tcatgagtgg atacaccgat cacgacatcg
      421 tccgccgggg gctgctcgac cccaatcaac cgttcttgca gaagcccttc acccctgacg
      481 ctctggtgcg gcgggtggca gaactcctga agcacaagaa gcccgctcac gcagcggcgg
      541 cacagccaac cggcagatca tcccctacaa ctgcggacta agcgcgatct cgtagcgcac
      601 cgggaggcta ttcaggtcgc cggccgactc gatacgatac tgcacctcac gatcccactg
      661 tccggcggca tgcgtgccgc gcgcgacggt caccgacgag ccggcggtga gctcctgaaa
      721 ctcgccgttt acgccgcgga cccagatacg ggaggccgcg acggcggtcc cccgaaccac
      781 gagctggtac ccggtgttgg cggccacgcg gaccgtgacc gaagcctcgc ggaccgagcc
      841 catccggcca gtctctcgct cagcactcac atcctggatc gagccgcgcg gagccacatg
      901 ggccacgagg gcgatctggg ccacgccgga actgatccct acctggctct cggcgacgcc
      961 gggaagggcg agcgccaccc cgagagcagc caggatccga acgagtacct gccgcgatgc
     1021 gcccacaaag tctccgaggt tagggtctcc actcggcacc ctagtaagca tgcggcgggc
     1081 catgccgccc gttaatataa cttcatgtaa aacagctact tagcagaacc gttgaagtct
     1141 aaaaactggt cggtagccgt caaagaatgc atcactctga tctgcttgtg aacttaagtg
     1201 cttgtggcgt cacacctcgg ctcagggcgg ggcgaaggtg atcagaaaat gatgttggca
     1261 gtcgggggac cgttcccaga gccacggtgc cggaggctct ttttaggggg aattgcgcca
     1321 aggattgcgg cccaccggcg ccacagggac gaaccaaact cctaagagac tactctgctt
     1381 gctgttgggt gcctggccta ggatctgctc gacagggccg ggcgcccagg cagttcgatc
     1441 agcatgagga gtactccatg accccggcac ccacgcagcg aattctggtg gtggacgacg
     1501 acgcgagcat tcgccggact ctcaatatcc tgctgagcaa ggcgggatac gaagtcattc
     1561 aggcgtccga tggctccgag gccgtacgtc tgtggcggga ccgcggcgga gacctcgtca
     1621 tcaccgacct gcacatgccc gaaaaggacg gtatcgagac catcatagag ttgctctccc
     1681 acacccccgg catgagcatc atcgcgatgt cgggcggcgg gcagaccaaa cggctggatc
     1741 tgttgggtaa tgtcgcgctg cttggatcga tattgacgat cgagaaaccg ttcacgctgg
     1801 ctgagatgat ggccatggtc aaccgcgcgc tgaaacccat ccactaggct atcgttgcgg
     1861 gtcggtgccc gccacaatca agacaggctc accaaatatt gcaggtttgc gaagatgatc
     1921 ccaacggtcc tggtcattga agacaatcct ttgaatctcg agctcgtgcg tgacgtcctg
     1981 atggctgccg gcatgaaggt ggtggaggct cgcaccgcgc aggaaggcct cagggccgca
     2041 tcggagctga agcctaacct tatccttctg gatatccggc ttcccggcat ggacggattc
     2101 gccgtgcttg ggcgtctgaa ggccgactcg gccacggcgt cgattcccgt cgtagcgctc
     2161 actgcccagg ccatggtggg tgaccgcgag caggcgctgg ctgccggttt cgacgagtac
     2221 atccccaagc cgatagatac gcgcaccctg gccgacacgg ttcgtgcgct gctggatccc
     2281 gcacgacatc gccgttccgc ccacggcgag gcctcgtgaa ccgggcgaga ttgccttccc
     2341 gtcgccatcg catggccatc aatctggggt tcgcggtggt aatccttctc ctgggctcgg
     2401 ccgggtggat tacctatcgc gccagcgtcg aagccctgac ctcggcgcgg tgggtcagcc
     2461 gtacccacca ggggttggaa ggcctccggc aggtgctctc ctcactgcaa gatgccgaga
     2521 ccggccagcg gggctacatc atcagcggtg atgagcggta tctcgggcct tacaccgagg
     2581 gtgtaaaaca gatccgcgac caaatagccg agcttcggcg gctcgtcgtc gacagtgccc
     2641 agcaacggcg gctgggctcc ctcgagagtc tggccgctcg ccgggtcgat gtggttgctg
     2701 agggaatcgt cgcgcgccgg gagcgtgggc gcgaggcggg gatcgcgttc gtgctcacgg
     2761 gccgtggcaa ggcactgatg gactccgtcc gtgtccttgt cggcgaggtg gaaacagccc
     2821 agcgggatct cctccgaatc cggtcggagc gatccgaagc cctagcgcgg cggaccgagc
     2881 tgacgattct cctcgcgacc gggctcgggc tcctgcttct ggcgacgagc gccattctgg
     2941 ccaaccgaga aatccaggca cgaatgaaag ccgaggccgg cgtccgactg gtgaacgaga
     3001 agctggaaga tcgcgttgct gaacgaacgg aggagctcg
//
LOCUS       DASYRV010000493         4177 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3724209, whole genome shotgun sequence.
ACCESSION   DASYRV010000493 DASYRV010000000
VERSION     DASYRV010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4177
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3724209"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..714)
                     /locus_tag="VGQ24_13255"
     CDS             complement(106..714)
                     /locus_tag="VGQ24_13255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455861.1"
                     /translation="MTTLRPKPEARAEPALHARAMDNLSFIRSTMERATAFTAVPGWG
                     GVAMGVTALAATALANDRPPAEWLAVWLSASALALAIGGWAMALKARRGGTSVLSYSG
                     RRFVLSYVPPLAVGGLLTLVLVRAGLFSALPGTWLLLYGTGVVTGGAFSVRVVPLMGL
                     CFMILGAIALLVPPGWGEWLLAAGFGGLHIIFGLIIAWRYGG"
     gene            complement(836..1282)
                     /gene="mscL"
                     /locus_tag="VGQ24_13260"
     CDS             complement(836..1282)
                     /gene="mscL"
                     /locus_tag="VGQ24_13260"
                     /inference="COORDINATES: protein motif:HMM:NF013869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HEV8455862.1"
                     /translation="MLKEFKAFVMRGNVLDLAVGIIIGASFGTIVKSLVDDVIMPPIG
                     LALGNVDFANLFVLLKPGLKAPPPYATVADAQAAGAVTINYGNFVNNVVTFIIVAFAV
                     FLIVRVANRLKPQDAVPSTKDCPYCRMAIPVSASRCPHCTSDLKAA"
     gene            complement(1624..3126)
                     /locus_tag="VGQ24_13265"
     CDS             complement(1624..3126)
                     /locus_tag="VGQ24_13265"
                     /inference="COORDINATES: protein motif:HMM:NF004991.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercuric reductase"
                     /protein_id="HEV8455863.1"
                     /translation="MLHPPDEHNQRLLENVHPSGWVNPEPKDRYHIVVIGAGTAGLVT
                     AAAAAGLGARVALVERHLMGGDCLNVGCVPSKAIIRAARAWHEAREAHRLFGGPPAVE
                     RGDFGAVMERMRRIRADLSSADSVHRFRKFGVEVFLGDGRFVGPTAIEIGGKRLEFRR
                     AVIATGGRPEVPDTPGLDSTGYQTNETIFSLTQLPRRLLVIGAGPSGCELAQAFARFG
                     SQVTVIEQGEHALPEEDADMARVLECAMERDGVVFRHRASISRVEASAGEKLIVLRGA
                     NAEEPVRGDEILVAVGRVPNVEGLNLEAAGIGYDRTGVRVNDRLRTTNRRVYAAGDVC
                     SRFQFTHAADAMARIVVQNALFYGRARASRLIIPWTTYTSPEVAHVGMYEEDARAAGF
                     QVDTLTIPMQQVDRAVLDGETEGFFRVHLKKRTGQILGATLVAEHAGEMISEISVAMT
                     GGLGLGRIGATIHPYPTQAEVFRKAADAWRRQKLTPTVQRLLQTFFRLFR"
     gene            complement(3126..3806)
                     /locus_tag="VGQ24_13270"
     CDS             complement(3126..3806)
                     /locus_tag="VGQ24_13270"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HEV8455864.1"
                     /translation="MLLLLVGLAVLAIAGRSAIESIPRFADWVSGNGMAGALLFVLGY
                     IAATVALVPGLLLTIAAGAIFGLAAGTALVLVAATLGASAAFLVSRYLARPLVERRLA
                     GNDRFAAIDRAVGLEGRKIVFLLRLSPVFPFNLLNYALGLTKVRFRDYVLASVGMLPA
                     TLLYVYYGKLFGDVARVASGTPIPHGPEYYVLLCVGLAATIAVTALVTRTARRALRDT
                     IGDTGGTP"
     gene            complement(3815..>4177)
                     /locus_tag="VGQ24_13275"
     CDS             complement(3815..>4177)
                     /locus_tag="VGQ24_13275"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEV8455865.1"
                     /translation="GSEVVDAWRGAQGHLQTIPSLSLADLAAQLQSNDKLVVDVRAEG
                     EWKAGHLPGSLNLPLGELDRRLGELPRDRAVIVHCQTGARAAMAASLLRARGLREVSQ
                     FPGGFAEWRAAGQPVESA"
BASE COUNT          740 a         1419 c         1375 g          643 t
ORIGIN      
        1 agccgatcga gctccagcgg accgtgccgc gccccatcac ccttgatgcc ttggagccgt
       61 tgcggccgct tgcctccgtc atggccagtc gaggccaggt tggatttagc caccgtacct
      121 ccatgcaatg atcaggccga agatgatatg gagtcctccg aatccagccg ccagcagcca
      181 ttctccccag cctgggggaa ccagcagcgc gatggcgccg agtatcatga agcagagccc
      241 catgagagga acgacccgga cggagaaggc tccgccggtc acgaccccgg tcccgtacaa
      301 gaggagccag gtccccggga gtgcgctgaa tagcccggcc cgaaccagaa cgagggtgag
      361 aagaccaccc accgccagcg gtggcacgta actcaggacg aagcgacggc cggaatacga
      421 gagtaccgat gtccctcccc gcctggcctt gagcgccatg gcccaacccc caatggcgag
      481 ggcgagtgcc gaggcggaga gccacaccgc cagccattct gcgggcggcc ggtcattggc
      541 cagtgcggta gcagccagcg cggtgacgcc catggcaacc ccgccccacc cggggaccgc
      601 ggtaaaggcc gtggcccgtt ccattgtgga gcggatgaag gacaggttgt ccatcgcccg
      661 ggcgtgtagc gccggttcgg cccgtgcctc gggcttggga cggagcgtgg tcatgccctg
      721 agtgtaatcc tccagcgcgg tttcatcaag tgctttgcat tgtaaagtta aatcggctcg
      781 accgccaccg ccgtcccgta gcacggcacc gcgtcgtcat ggagtggcgc acggatcaag
      841 ccgccttcag gtcggaggtg cagtggggac agcgggaggc gctcaccggg atcgccatcc
      901 ggcagtaagg gcaatccttt gtgctgggga cggcatcttg gggcttgagc cggttggcca
      961 cgcggacgat gaggaatacg gcaaaggcca cgatgatgaa ggtgaccacg ttgttgacga
     1021 agttcccgta gttgatcgtc accgcacccg ctgcctgcgc gtccgcaacc gtggcatatg
     1081 gcggcggtgc cttcaggccc ggcttgagca gcacgaacag gttggcgaaa tccacgttgc
     1141 cgagcgcgag cccgatcggt ggcatgatga cgtcgtcgac cagcgacttg acgatggtgc
     1201 cgaacgacgc gccgatgatg ataccgacag ccagatcgag cacattaccg cgcatcacga
     1261 acgccttgaa ctctttcagc attgggcctt ccggcggttg gggttggaga ggatataccg
     1321 aagatcacga ggcgccggta gagcacggtc ccttccgccc accagcggaa ctgggcgagc
     1381 ccctccggct tcgagtgtca gacttccccc cacacaaccc cttacactca gcctccggga
     1441 ctcgctcagt tccgctggct ccgctgccca catggggtgg ggagcgcgcg acacgggggt
     1501 gggttcgaag gcaggctccc aggggaaggg cggagtggtt gtcatggagc ctgccggagg
     1561 gcccaccccc gtgtcgcccc gaggcggggt ggccaaacgg accaggggac tccgagctcc
     1621 gcgttagcga aaaagtctga agaatgtctg gaggagccgt tgcaccgtgg gcgtgagctt
     1681 ctgtcgccgc cacgcgtccg ccgccttgcg gaacacctcg gcctgcgtag ggtacggatg
     1741 aatcgtcgcg ccgatccggc ccaggccaag tcccccggtc attgcgacgc tgatctcgct
     1801 gatcatctcc cccgcatgct cggccacgag cgtggcgccg aggatctggc cggttctctt
     1861 cttcaggtga acccggaaga agccttcggt ctcgccgtcc aggactgctc gatcgacctg
     1921 ctgcatgggg atggtgaggg tgtccacctg gaagcccgcc gcgcgcgcgt cctcttcata
     1981 catgccgaca tgcgccacct ccggactagt gtacgtcgtc caaggaataa tgagccggct
     2041 cgccctggct cgcccgtaga agagcgcgtt ctgcaccacg atgcgggcca tcgcgtccgc
     2101 cgcgtgggtg aactgaaagc gggagcagac gtcgccggcg gcgtagaccc ggcggttcgt
     2161 ggttcgaagc cggtcgttca cccgcacccc cgtccggtcg tagccgatac cggcagcctc
     2221 cagattgagc ccctcgacat tgggcacccg gcccaccgca acgaggatct cgtcaccccg
     2281 caccggctcc tcagcgttcg cgcctcgtag aacgatcagc ttttccccgg cgctcgcctc
     2341 cacccgactg atggacgccc ggtgccggaa gacgactccg tcgcgctcca tggcacactc
     2401 aagcaccctc gccatgtcgg cgtcttcctc gggcagcgcg tgctcgccct gctcgatgac
     2461 ggtgacctgg ctcccgaacc gggcaaaggc ctgcgccagc tcacatccgc tggggcccgc
     2521 gccgatcacg agcaagcggc ggggcagctg ggtgagggag aagatcgtct cgttagtctg
     2581 gtacccggtg ctgtcgaggc ccggagtatc cggcacctcg ggccgcccac cggtggcgat
     2641 caccgctcgg cggaactcga gccgcttgcc tccgatctcg atcgccgtgg gtccaacgaa
     2701 ccggccatcg ccgagaaata cctctacgcc gaacttacgg aatcggtgga cactgtcggc
     2761 ggaacttagg tcggccctga tcctccgcat gcgctccatc accgccccga aatctccgcg
     2821 ttccacggcc ggcggtcctc cgaagagacg gtgtgcctcc cgtgcttcat gccaggctcg
     2881 tgcggcccgg atgatggcct tcgacggaac gcagccgacg ttgaggcagt caccacccat
     2941 gagatggcgt tcgaccagcg cgactcgggc accaagccca gccgccgccg ccgcggtcac
     3001 gagcccagcg gtgccggcgc cgatcaccac gatatggtag cggtccttgg gctcgggatt
     3061 cacccagccg gacgggtgca cgttctcgag cagccgctgg ttgtgctcgt cgggcggatg
     3121 gagcatcagg gagtgccgcc ggtatcgccg atggtgtcgc ggagtgcgcg tcgggcggtg
     3181 cgagtcacca gcgcggtgac cgcgatcgtg gccgcgagac cgacacagag gaggacgtag
     3241 tattccggtc cgtgtgggat cggcgtgccg ctcgcgaccc gggccacgtc gccgaaaagc
     3301 ttcccgtagt acacgtacag cagggtcgcc ggcagcatcc ccaccgaggc aaggacgtaa
     3361 tcccggaagc gcaccttggt gagcccgagc gcgtagttca acaggttgaa gggaaagaca
     3421 ggcgagagcc tgagcaggaa gacgatcttg cggccttcca ggccgaccgc gcgatcgatg
     3481 gcagcgaagc ggtcgttgcc ggccagccgg cgctccacca gcgggcgcgc caggtagcgg
     3541 gagaccagga acgcggccga cgcgccgagt gtcgccgcca ccaagacgag cgccgtgccc
     3601 gcggcgaggc cgaagatcgc tccggcggct atcgtaagga gcaaaccggg aacgagcgcc
     3661 accgtcgcgg cgatataccc gagcacgaac aacagcgcac ccgccatccc gttgccggag
     3721 acccagtcgg caaagcgggg aatcgactcg atcgctgatc ggcctgcgat tgccaggacc
     3781 gccaggccaa ccaggagcag cagcaatcgc gttgtcaggc gctctcgacc ggctgccccg
     3841 cggctcgcca ctcggcgaat cctcctggga actggctcac ctcgcggagg ccgcgagctc
     3901 gaagcaggct cgccgccatg gcggcgcggg cgccggtctg gcagtgcacg atcactgcgc
     3961 gatcccgcgg cagctcgccg agccggcgat cgagctcgcc gaggggcagg ttgagtgatc
     4021 cgggcaggtg acctgccttc cactcccctt ccgcgcgcac atccaccacc agcttgtcgt
     4081 tggactggag ctgagccgcc aagtccgcca ggctgagcga aggaatggtc tggaggtgcc
     4141 cctgcgcgcc acgccacgcg tccactacct cgctccc
//
LOCUS       DASYRV010000494         2802 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2276397, whole genome shotgun sequence.
ACCESSION   DASYRV010000494 DASYRV010000000
VERSION     DASYRV010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2802
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2276397"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..339
                     /locus_tag="VGQ24_13280"
     CDS             <1..339
                     /locus_tag="VGQ24_13280"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEV8455866.1"
                     /translation="AEAPWWNWLVVRPEDGEAVGSVAFGGKPDAAGAVLIGYAMYPGH
                     EGRGYATEAVKAMVEWAFAQPGVKTVRALAPVWNTPAVHVAEKVGMRPVASDEDDEIG
                     EVLVYELART"
     gene            complement(410..1963)
                     /locus_tag="VGQ24_13285"
     CDS             complement(410..1963)
                     /locus_tag="VGQ24_13285"
                     /inference="COORDINATES: protein motif:HMM:TIGR00924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HEV8455867.1"
                     /translation="MATAAVRRPESHHTERDTRFFGHPRGLSTLFFTEMWERFSYYGM
                     RGILILFMTAPVAAGGLGFDTATAGPIYALYVSSVYLLSVPGGWVADRVLGLRRAVFV
                     GGVIIMMGHICLAVPSITTFYLGLALIATGTGLLKSNVSVLVGKLYSPDDVRRDAGYS
                     IYYMGINTGALIAPIVTGWLAQGEGFKRILASVGMRPDISWHWGFGAAAVGMFLGLVQ
                     YVLGGKHLSPDGLRPVRPSDPAAAAKVDRQVRLVGLLTIGIALVVMVLVLSGLVGFDP
                     EAVSRNFKWVLIAVTIGFFAWLFLSGGWTREERKSLVVIAVLFAAAVVFWMAYEQAGS
                     TLNLFAERSAKNSILGHRFPASWYQSLPPLFIILFAPVFAIVWVRLGNRNPSSPAKFA
                     LGLFLLGLGFAVMIGAASAAVGGTKVSPMWLVLSYLLQTLGELCLSPVGLSAMSVLAP
                     ARIAGLVMGVWFLALSVGNYLAGMASSFYETMPLPKLFTIVTVTALATAVVLALLVKP
                     IRRMMARPS"
     gene            complement(2099..>2802)
                     /locus_tag="VGQ24_13290"
     CDS             complement(2099..>2802)
                     /locus_tag="VGQ24_13290"
                     /inference="COORDINATES: protein motif:HMM:NF018024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1028 domain-containing protein"
                     /protein_id="HEV8455868.1"
                     /translation="MRTDTMLQDRQVGMVDARGNAASFTGTSTFDWAGGRVGPNGRMG
                     GKGEVIVGRGYAAQANIMVSDQTVKNLAETFERTRGNLADRLMVALKAGQAGGGDKRG
                     MQSAALLVVRKNGGYLGANDRFVDIRVYDAVDPIAELERLLALHKLHFFPSEPRDLMA
                     ITPAIVAQLEPILLSEPVNQPEKWLKAKQGSATPGFLEALKNFMYWENHDVRVRMDGK
                     IDRVVLGDILKRRKR"
BASE COUNT          562 a          916 c          874 g          450 t
ORIGIN      
        1 gcggaagcac cctggtggaa ttggctcgtc gtcagaccag aggatgggga ggcggtaggc
       61 tcggtggcgt ttggtgggaa gcctgatgcc gccggcgcgg tgctgatcgg ctacgccatg
      121 tatccgggtc atgaaggtcg cggctatgcg accgaggcgg tcaaggcgat ggtcgagtgg
      181 gcctttgccc agccgggggt gaagacggtt cgcgccctcg caccggtgtg gaacacgccg
      241 gcggtacacg tcgccgagaa ggtcggcatg cggccggttg cgtccgatga ggatgatgag
      301 atcggtgagg tcttggtgta cgagctggcc cgaacctgag ccgcctaagt attggtagag
      361 cttcgtgttt tcgtgctttc gtgttatgca ggttccgagt gcaatcgatc tacgacgggc
      421 gcgccatcat cctccgaatc ggtttcacca gcagcgcgag caccactgcg gtggcgagcg
      481 cagtcacggt cacgatggtg aacagcttag gcagcggcat cgtctcatag aagctggacg
      541 ccataccggc gaggtagttt ccgactgaca gagccaggaa ccacactccc atcaccaacc
      601 cggcgatccg cgccggcgcc agtacgctca tcgcgctgag tccgaccgga ctgaggcaga
      661 gctcgcccag cgtctgcagc agataggaca ggaccagcca catggggctc accttggtac
      721 cgccgacagc ggcggacgca gccccgatca tgaccgcaaa gccaagtccc aatagaaaga
      781 gtccgagagc gaatttggca gggctggagg ggttccggtt gcccagccga acccacacga
      841 tcgcgaacac tggcgcgaac aggatgatga agaggggcgg tagcgactgg taccagctgg
      901 ccgggaaacg atgccccagt atggaattct tggcgctacg ctcggcgaac aggttgaggg
      961 tcgagccggc ctgctcgtag gccatccaaa acaccaccgc ggccgcaaag aggaccgcga
     1021 tcaccacgag acttttccgc tcctcgcggg tccacccacc gctcaggaag agccaggcga
     1081 agaacccgat cgtgaccgcg atcagaaccc acttgaaatt ccgggagacc gcctccgggt
     1141 cgaaacccac caagccgctc agcaccagca ccatcacaac cagggcaatc ccgatggtga
     1201 ggagcccaac gagccggacc tgacggtcca ccttcgcggc cgccgccggg tcgctcggcc
     1261 tcaccggacg caacccgtcg ggcgagagat gcttcccgcc aagcacgtac tggaccagcc
     1321 cgaggaacat ccccaccgca gcggcaccga agccccagtg ccaggatatg tcgggccgca
     1381 ttcccaccga ggccaggatg cgcttgaaac cttccccctg cgccagccag ccggtcacga
     1441 tcggcgcgat caacgcgccg gtattgatcc ccatgtaata gatcgagtag cccgcgtccc
     1501 gccgtacatc gtccggacta tagagcttcc caaccagcac gctcacattg gatttgagga
     1561 gcccggttcc ggtggcgatc agcgccagcc cgaggtagaa cgtcgtgatc gagggcaccg
     1621 cgaggcagat gtgccccatc atgatgatga cgccacccac gaagactgcg cgccgcaggc
     1681 cgagcacccg gtcggccacc cagccaccgg gaaccgacag caggtaaacg gagctgacgt
     1741 acagggcgta gatcgggcct gccgttgcgg tgtcgaaccc cagtccgccc gccgcgaccg
     1801 gcgcggtcat gaacaggatc aggatgcccc gcatgccgta gtagctgaac cgctcccaca
     1861 tctcggtgaa gaagagggtg gagagcccgc gcggatgccc gaagaagcgg gtgtcgcgtt
     1921 cggtatggtg agactctgga cgtcggacgg cggcggtggc cacgagtcga actccaaaaa
     1981 agcgtgagcg ggaacggcaa cagcgtgagc ggtgagcggg aaaaacagaa agcttgtacc
     2041 aggcctgtaa acgggtgtca ccctgagcga agcgaggggg cggagcgcag cgtcccgctc
     2101 accgcttacg ccttttgaga atgtctccta agactaccct atcgatcttc ccgtccatcc
     2161 gcacccgcac gtcgtgattc tcccagtaca tgaagttctt cagcgcttcc aggaaccccg
     2221 gcgtggcgct accctgcttg gccttgagcc atttctccgg ctggttgacc ggctcgctca
     2281 gcaggatcgg ctccagctgc gcgacgatcg cgggagtaat ggccatgaga tccctgggct
     2341 cactgggaaa gaaatgcagc ttgtgcagcg caagaagccg ctccagctcg gcgatgggat
     2401 ccaccgcgtc gtagacccga atatcgacga accggtcgtt cgcgccgaga tagccgccgt
     2461 tcttgcggac caccagcaag gcggccgatt gcatgccgcg cttgtccccg ccaccggcct
     2521 ggcccgcctt gagcgccacc atcagccggt ctgccagatt gcccctggtg cgctcgaatg
     2581 tctccgccag attcttgacg gtctgatccg acaccataat gttcgcctga gccgcgtatc
     2641 cccgaccgac gatcacctcg cccttcccgc ccatccgccc gttcggtccg acccgaccgc
     2701 cggcccagtc gaaggtggat gtaccggtaa agctcgccgc gttcccccgt gcgtccacca
     2761 tcccgacttg ccggtcctga agcatggtgt ccgtacgcat ga
//
LOCUS       DASYRV010000495         4026 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3012171, whole genome shotgun sequence.
ACCESSION   DASYRV010000495 DASYRV010000000
VERSION     DASYRV010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4026
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3012171"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..344
                     /locus_tag="VGQ24_13295"
     CDS             <1..344
                     /locus_tag="VGQ24_13295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455869.1"
                     /translation="EGVDGRIYFETQQGLRSMVISVKGGHVNPAQIRELVGTLAHQST
                     TELAGFICLEKPTKGMIQEATRGGMFTYQGVQYPRVQIRSVEELLDERAFETPSRVKT
                     LGWQKQTQLAI"
     gene            356..553
                     /locus_tag="VGQ24_13300"
     CDS             356..553
                     /locus_tag="VGQ24_13300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455870.1"
                     /translation="MELAHYRKERAGKAGIHPQPGQRYYGCGKDTVEGYRWIEPVDGV
                     GKICVLETELELIQDVTYRAE"
     gene            complement(575..763)
                     /locus_tag="VGQ24_13305"
     CDS             complement(575..763)
                     /locus_tag="VGQ24_13305"
                     /inference="COORDINATES: protein motif:HMM:NF019540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HEV8455871.1"
                     /translation="MRSSEIIAKLEAAGWEHRRTKGSHYIMGKVGKYPVVVPHPTKDV
                     YIEIIKRIEKQSGVKLRE"
     gene            955..1380
                     /locus_tag="VGQ24_13310"
     CDS             955..1380
                     /locus_tag="VGQ24_13310"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HEV8455872.1"
                     /translation="MQYPAVVTREGDVFLIEFPDCPGCQTFTRQESAIDSTAAEALEG
                     WLEVALEDGLNPPAPGRPKIPKGAELRKIRVSSPLAAAIEIRSARKALKLSQAALGRM
                     IGISQQAVAKLENGSGNVSLETLEKVARGLKRDVHIELV"
     gene            complement(1438..1902)
                     /locus_tag="VGQ24_13315"
     CDS             complement(1438..1902)
                     /locus_tag="VGQ24_13315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455873.1"
                     /translation="MASLAYNRGVKELLNATTDYLTATMKVALLSTATAYTPDQDHDF
                     MDAGGANDPTDAELNVTGYTRGFGGAGRKTMASKTVTENDTNNRVEFDCADITWTALG
                     SGQTIAQAVVIKEVTNDAATVLYGLLDPTDTPTNGSDITLQVASNGWLNWTT"
     gene            complement(1906..2499)
                     /locus_tag="VGQ24_13320"
     CDS             complement(1906..2499)
                     /locus_tag="VGQ24_13320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455874.1"
                     /translation="MPTTKTPQPGDPFRLDGFLYQLGPADGLVFGSAKMKAVAAFVAA
                     NPPLAEPDTNRVRFDASNPDRWTVVRGFRRVPDPDPELGARRKANVNYKLSGQCCEED
                     LLWVEPVDYLDHVKTQGAALVLGTPNARAKKWRQAWVDAHVAEVSARLDKFSGAWILG
                     GRALLKPREESMDELERSELPGAVAAILTSTFDFVEG"
     gene            complement(2522..2878)
                     /locus_tag="VGQ24_13325"
     CDS             complement(2522..2878)
                     /locus_tag="VGQ24_13325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455875.1"
                     /translation="MSAKRINCSAKNRYQVDIRIPNDKGDLAAPSAAGLLGGIKVRFS
                     TTRNGAAIAGDVDNLAATETTGKIGRMYYELSQALHQSRLLTLGEGAPFFAIWFLTGQ
                     FDIESIEYQVGTGTYQ"
     gene            complement(2875..>4026)
                     /locus_tag="VGQ24_13330"
     CDS             complement(2875..>4026)
                     /locus_tag="VGQ24_13330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455876.1"
                     /translation="CVFDTGAAAGEVVNIYVGTPTTLLAERTYGTAVDGSGALSTDSG
                     GGYCIGNVAGNSQVTPIQGQVDMAGVINRALTLAEAQSLVGRPRMIAGTVALHRLGDN
                     GTGTQPDFSGNGNDGTVTGATVSAGPPVGPWVRRGALFIPQTAASNQVLTPGAAVVSV
                     SAIDPSLAGSGTVALTPAAAVVAVSAPSPVVTGSSAVALLPAAAIVAVSVPASSLASG
                     GAPQTLAPAAAMVTVAVPSPTLAEGAVALTPAAAIVTVAAISPTLVSGGAPQTLTPAA
                     ASVAVTAVTPLIVPSAVLLAPAAALVAVLVPSLALVASGSGARLTPAAAVVLVTAHTP
                     TWFTGILFGEYDVRDRTVPAFALTDRTVANYRLIERTVPTYQLTDRTDP"
BASE COUNT          702 a         1279 c         1333 g          712 t
ORIGIN      
        1 acgagggcgt ggacgggcgt atttatttcg agacgcaaca gggtttgcgg agtatggtga
       61 tttccgtcaa aggcggacac gttaacccag cgcagatcag ggaactagtg gggaccttgg
      121 cgcaccagag caccacagag ctagccgggt tcatctgtct agagaagccg acgaagggga
      181 tgattcagga ggccacccgg ggaggaatgt tcacgtatca gggagtccag tacccccggg
      241 tccaaattcg atccgtggaa gaactgttgg acgagcgggc ctttgagacg ccttcccggg
      301 tcaaaaccct tggctggcag aagcagaccc agttagccat ctagattctg ttacagtgga
      361 actagcccac taccgaaagg agagggcggg gaaggcaggg attcacccgc aaccaggcca
      421 gcggtattat ggctgcggca aagacaccgt ggagggctat cgttggatcg agccggtgga
      481 cggcgtcggc aaaatctgcg tgcttgagac cgagctcgag ctgattcagg acgtcacgta
      541 tcgagcggag taggagcggt cccggaggcc cctcctactc cctgagcttc acccccgatt
      601 gcttctcgat ccgcttgatg atctcgatgt acacgtcctt cgttgggtgc ggcaccacca
      661 ccgggtactt gcccaccttc cccatgatgt agtgcgaccc cttcgtccgc cggtgttccc
      721 acccggcggc ttctagcttg gcgataatct cagatgagcg catgacacaa tatacaacct
      781 ataggttgtg tcgtcaagtg ctacgttcca aagtatagct gagtattaca acgtattgcg
      841 ttaacaacca aacggttgta gtgtgttgta cgacaaaagg ctacaaaaga ctacaaaaga
      901 ctacaatgtc ggaccatagg tatcacgttc caccatgaag aggcgacatc ctaaatgcag
      961 tatccagcgg tagttacgcg cgagggcgac gttttcctga ttgaattccc ggattgcccg
     1021 gggtgccaga ccttcaccag gcaggagtct gctatcgact ccaccgccgc cgaggccctg
     1081 gaggggtggc tcgaagtggc gctcgaggat ggactcaatc cgccggctcc cggtcgaccg
     1141 aagatcccga agggcgcgga gcttcggaag atccgggtgt cgtccccgct cgcggccgcc
     1201 atcgagatcc gctccgcgcg caaggccctg aagctgtctc aggctgcgct cggtcggatg
     1261 atcggcatca gtcagcaggc ggtcgcgaag ctggagaacg gatctggcaa cgtgtcgctg
     1321 gaaacgctgg agaaggtcgc gcggggcctg aagcgtgacg tgcacatcga gctggtgtag
     1381 cgacggtcga atgagagaac gcgggccggc gccgtcctgg cgccggccct tcggccgtca
     1441 ggttgtccag ttcagccaac cgttgctcgc gacctggagg gtgatgtctg acccgttcgt
     1501 cggcgtgtcg gtcgggtcga gcagcccgta gagcaccgtc gccgcgtcgt tggtcacctc
     1561 cttgataacc acagcctgcg cgatcgtctg cccggacccg agcgccgtcc aggtgatatc
     1621 ggcgcagtcg aactccaccc ggttgttggt gtcgttctcg gtgacggtct tggaggccat
     1681 cgtcttccgg ccggcacctc cgaagccccg ggtgtaaccg gtgacgttga gctccgcgtc
     1741 ggtcgggtcg ttggccccgc cggcgtccat gaagtcgtgg tcctggtccg gcgtgtacgc
     1801 cgtggccgtc gacaggaggg ccaccttcat cgtcgcggtc aggtagtcgg tcgtggcgtt
     1861 gaggagctcc ttgacgccgc ggttgtaggc cagagatgcc atggttcagc cctccacgaa
     1921 atcaaaggtc gacgtcagga tcgccgctac cgcgccgggg agctcgctgc gctcgagctc
     1981 atccatgctc tcctcccgcg gcttgagcag cgcccggccg cccagtatcc acgccccaga
     2041 gaacttatcc agccgggccg agacttccgc cacatgggca tcgacccagg cttggcgcca
     2101 cttcttcgcc cgggcgttgg gcgtgcccag gaccaacgca gcgccctggg tcttcacgtg
     2161 atcgaggtag tcgaccggct cgacccagag caggtcctcc tcgcagcact gcccgctcag
     2221 cttgtagttg acgttcgcct tccgccgggc gccgagctcg ggatcgggat ccggaacccg
     2281 ccggaagcca cgcacgaccg tccaccgatc cgggttgctg gcgtcgaacc ggacccggtt
     2341 ggtatccggc tcggccagtg gcgggttggc cgcgacgaag gcggcgaccg ctttcatttt
     2401 ggcgctgccg aagaccaggc catcggccgg ccccagctgg tagaggaacc catcgagccg
     2461 gaacggatcg ccgggctgcg gggttttcgt ggtgggcatc atgcgctcct tgtcagagaa
     2521 atcattggta ggtccccgtc ccgacctggt actcgatgct ttcgatgtcg aactggccgg
     2581 tcagaaacca gatcgcgaaa aagggggccc cttcgcccag tgtcagcagg cgagattgat
     2641 ggagcgcctg agacagctcg taatacatcc gcccgatctt cccggtcgtt tctgtcgcgg
     2701 ccaggttgtc gacatcgccg gcaatcgccg ccccgttcct ggtcgtcgag aaccggacct
     2761 tgatgcctcc caggaggccg gccgcgctcg gggccgccag atcccccttg tcgtttggga
     2821 tgcggatatc gacctggtac cggttcttgg ctgagcagtt tatccgcttc gcgctcatgg
     2881 atccgtccga tcggtgagct ggtacgttgg gacggtacgc tcgatgagcc ggtagttggc
     2941 cacggtgcga tcggtcagcg cgaatgccgg cacggtgcga tcgcgcacgt cgtattcccc
     3001 gaaaaggatg ccggtgaacc aggtcggcgt gtgcgcggtc accagcacga ccgcggccgc
     3061 tggcgtgagc cgagctcccg atcccgaggc caccagcgcc agggagggca ccaggaccgc
     3121 caccagcgcg gcggccggcg cgagcaggac cgcgctcggg acgatcagag gtgtcaccgc
     3181 cgttacagcc accgaagccg cggcgggggt gagcgtctgc ggcgctccgc ccgagacgag
     3241 cgtggggctg atggcagcga ccgtcacgat tgccgccgcc ggggtgaggg ctaccgcccc
     3301 ctcggcgagc gtcgggctgg gtacggccac ggtgaccatt gccgctgcgg gggcaagcgt
     3361 ctgcggtgcc ccgccactcg ccaagctgga tgctggcacg gacaccgcca cgatcgcggc
     3421 ggctggcaat agggccactg ccgatgaccc ggtcaccacg gggctaggag cggagacggc
     3481 gacgacggcc gccgccggtg tcagcgccac agtgcccgag ccggccaggc tcggatcaat
     3541 cgccgagacg cttacgaccg ccgcgccagg agtaagaacc tggttgctgg cggccgtttg
     3601 cggaatgaac aaggcgccgc gccggaccca cggcccgacc ggcggtccgg cgctcaccgt
     3661 cgcccccgtg accgtgccgt cgttgccgtt cccgctgaaa tcgggttgcg tgccggtccc
     3721 attgtccccg agccgatgta gggccaccgt cccggcgatc atccgcggac ggcccacgag
     3781 ggactgggcc tcggccaggg tgagcgcgcg gttgatgact cccgccatat cgacctggcc
     3841 ctgaatgggc gtcacctgcg agttgccggc gacgttgccg atgcaatagc cgccacccga
     3901 gtcagtgctc agcgcccccg atccgtccac ggcggtgccg taggtgcgtt ccgcgaggag
     3961 ggtggtcggg gtgccaacgt agatgttgac gacttccccg gcggccgccc cggtatcgaa
     4021 gacgca
//
LOCUS       DASYRV010000496         2076 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3725219, whole genome shotgun sequence.
ACCESSION   DASYRV010000496 DASYRV010000000
VERSION     DASYRV010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3725219"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..>2076)
                     /locus_tag="VGQ24_13335"
     CDS             complement(72..>2076)
                     /locus_tag="VGQ24_13335"
                     /inference="COORDINATES: protein motif:HMM:NF021942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HEV8455877.1"
                     /translation="WLDHVRLASIRLPNCSSSFVSSRGLVMTNHHCARECITAVSTPD
                     SNFQELGFVAKTQAEERKCPGLYVDQLQSIEDVTEPIRKAVTARAPATQVAQRNAAIA
                     AIEKSCGEEAGLQCQVVTYYQGGIYSLYRFKRFDDLRLVMAPEEAISFFGGDPDNFTY
                     PRYDLDLSLMRVYENGRPAQPKDYLKWSKEGAKEGDVVFVTGNPGSTGRLLTVAQMEY
                     LRDVQYPAQLSSYERNLAVLRELAQRDEQTRRAVENDIFSLENSKKAVTGYLSGLQDS
                     SLMARKRAFERDFRRRIAADPKLRLRYGASWDAIATAQRQLAALAKQQRWYSFGASPL
                     LNAAGGIVRIPQQAKLPDSLRLPQYRGRGLENIKNSILGDMSAEPEQDKQMIQAWLTQ
                     AAKDLPRNDPYLNAFLGGRSPEVAAEVAVNGTKLADSTARAALIEGGSAAVAGSADPL
                     IVLARKLNPIAMRVQQRAARLQDVSSANTEKVGQAIFAAYGRSLPPDATFSLRISDGV
                     VKSYPMNGTIAPYKTSFYGLYARSAEFDDKPPFRLPERWKTHRDRLDLAQPLDFVTTN
                     DIIGGNSGSPVINKNAEVVGLIFDGNIEQLPNRFLYTDEVSRAVAVHSRGLIEALRKV
                     YEADRIADELEGVTTARAPAPVRDTLKRAPVPARDTSKAGQGR"
BASE COUNT          301 a          666 c          719 g          390 t
ORIGIN      
        1 ctggcttccg taactcgtgg agtaggtccc ctcgctgcgc tcgggatgag gagtcggggg
       61 tgcgctcgct cctatcgccc ctgccctgcc ttggaggtgt ccctggctgg caccggcgcc
      121 cgcttcaggg tgtctctcac tggggccggc gcccgcgcgg tggtcactcc ctcgagctca
      181 tccgcgatcc gatccgcctc gtacaccttc ctcagtgcct cgatcagtcc gcgtgagtgc
      241 accgcgaccg cccgcgacac ctcatcggta tagaggaacc gattgggcag ttgctcgatg
      301 ttgccgtcga agatcagccc caccacctcg gcattcttgt tgatcaccgg gctacccgaa
      361 ttgcccccga tgatgtcatt ggtggtgacg aagtcgagcg gctgggcgag atcgagccgg
      421 tcccggtggg tcttccaccg ttccggcaag cggaagggcg gtttgtcgtc gaactccgcc
      481 gatcgggcat agagcccgta gaagctggtc ttgtacggcg cgatcgtccc gttcatggga
      541 tagctcttga ccaccccgtc gctgatccgg aggctgaagg tggcatcggg cgggagcgag
      601 cggccgtagg cggcgaagat cgcctgcccc accttctccg tgttggccga gctcacgtcc
      661 tggagccggg cggcgcgttg ctgcacccgc atggcgatcg gattgagctt ccgagcaagg
      721 acaatcaagg ggtcggccga gccggccacc gcggccgatc cgccctcgat gagcgctgcc
      781 cgggccgtcg agtcggccag cttggtgccg ttcactgcga cctcggccgc gacctcggga
      841 ctccggccgc ccagaaatgc gttgaggtaa ggatcgttcc gcgggagatc cttagcggcc
      901 tgggtgagcc aggcctggat catctgcttg tcctgctccg gctcggcgga catgtcgccc
      961 agaatggagt tcttgatgtt ctccaatccc cggccgcgat actgcggcag ccggagggag
     1021 tcggggagct tggcctgctg ggggatccgc acgatcccgc cggctgcgtt cagcagcggc
     1081 gatgcgccga agctgtacca gcgctgctgc ttggccaggg ccgcgagctg tcgttgcgcg
     1141 gtggcgatcg catcccagga cgcgccgtag cggagcctga gcttggggtc ggcggcgatc
     1201 cggcggcgga agtcccgctc gaaggcgcgt ttccttgcca tgaggctcga gtcctgcagg
     1261 ccactgagat aaccggtcac cgccttcttc gagttctcca ggctgaagat gtcgttctcc
     1321 accgcgcggc gggtttgttc atccctctgg gccagctccc gcagcaccgc caggttccgc
     1381 tcgtaggagc tgagctgggc cgggtactgc acatcgcgga ggtactccat ctgggcgacg
     1441 gtgagcaggc ggccggtgga gccggggttg ccggtcacga acaccacgtc gccctccttc
     1501 gccccctcct tgctccactt caggtagtcc ttgggttggg ccggccggcc gttctcgtac
     1561 acccgcatca ggctcaggtc gaggtcgtag cgcgggtagg tgaagttgtc ggggtcgccg
     1621 ccgaagaagc tgatggcctc ctccggggcc atgaccaggc gaagatcgtc gaagcgcttg
     1681 aatcggtaga gcgagtagat gccgccctgg tagtaggtga cgacctggca ttggaggccg
     1741 gcctcctcac cacagctctt ctcgatcgcg gcgatcgcgg cgttgcgctg ggccacttgt
     1801 gtcgcggggg ctcgagcggt gaccgccttc cggatgggct cggtcacgtc ctcgatgctc
     1861 tggagctggt ccacgtagag gccggggcac ttccgctcct cggcctgggt cttggcgaca
     1921 aacccgagct cctggaagtt cgaatccggg gtggagacgg cggtgatgca ctcccgggcg
     1981 cagtggtggt tggtcatgac cagcccgcgg gaggacacga acgaggagga gcagttgggc
     2041 aggcgaatcg aggcgaggcg gacgtgatcc agccac
//
LOCUS       DASYRV010000497         2355 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3012439, whole genome shotgun sequence.
ACCESSION   DASYRV010000497 DASYRV010000000
VERSION     DASYRV010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2355
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3012439"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..383
                     /locus_tag="VGQ24_13340"
     CDS             <1..383
                     /locus_tag="VGQ24_13340"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEV8455878.1"
                     /translation="MGPFHLARMFLPRMRARGSGRLINLGSISDHRAFPENAAYGTAK
                     YGLRGLHEVLREEYRGTGVLCTLLSPGPTDTPAWDPVDPDNREGFTPRSRMLRPEDVA
                     EAVLWIATRPSHVDIDWLRLGPAT"
     gene            complement(396..821)
                     /locus_tag="VGQ24_13345"
     CDS             complement(396..821)
                     /locus_tag="VGQ24_13345"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEV8455879.1"
                     /translation="MEQNYPKILALLLSGTLTLGVAPQDAGQQPSAPPVMRTELLKQV
                     LPAGNYRNVEAVTVELGPAATAARHRHDVAVVAYVLEGIVENQFDGGAIVTHQAGESW
                     WEAPGTVHDVARNVSKTKRARLLVVYIGEEGKTPTVPLR"
     gene            878..>2355
                     /locus_tag="VGQ24_13350"
     CDS             878..>2355
                     /locus_tag="VGQ24_13350"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEV8455880.1"
                     /translation="MHPGDRTVLESIPVSERYVVERELGQGGMAVVYLARDRKHDRSV
                     ALKILRPEIIAGLGTERFLLEIRILARLQHPHILALLDSGATDETPSRPFYVMPYVDG
                     ETLRQRLTREGPLPVPEALRLVQEIGEALHYAHGQGLIHRDVKPENVLLSQGHAQVAD
                     FGIARAAGVAAGDRLTQTGLSIGTPMYMSPEQASGEREVDARADQYSLACVLYELLAG
                     QPPFTGLNAGAVLSRQLLDPVPPLTTLRPGVSGSVRRAIERALAKVPADRFGDVLEFL
                     TALDAPDVPAPEPDKRAIVVLPFANLSPDPDNAYFADGLMEEVIADLSRVRALTVISR
                     TSAIKLKDTNWDLRRIGRELNVRYVLEGSVRKAGSTLRITAQLIDAETDAHLWVEKYS
                     GTVDDVFDLQERLSRQIVEALRITLSPPEDREIAERPIADIRAFEYYQRARQEYYRHT
                     PEGMVAARALAEHGLAMVGPNEALYGMLGTVYAWSPTWLGGD"
BASE COUNT          367 a          797 c          766 g          425 t
ORIGIN      
        1 tgatgggtcc ctttcacctc gcgcggatgt ttcttccccg catgcgcgcg cgcggcagcg
       61 gccggctgat caacctcggc agcatctccg atcaccgcgc ctttcccgaa aacgccgcct
      121 acggcaccgc caagtacggc ctgcggggac tgcacgaggt gctgcgcgag gagtatcgag
      181 gtaccggggt gctctgtacc ctgctgagtc ccgggcctac cgataccccg gcctgggacc
      241 ccgtggatcc cgataatcga gagggcttca ctccccgctc gcgcatgctg cggccggagg
      301 acgtcgccga ggcggtgctg tggatcgcga cgcgtccctc gcacgtcgat atcgactggc
      361 tccgccttgg ccccgctacg taatcccctg ccgcctcatc gcagtggcac cgtcggggtt
      421 ttcccttcct caccgatata gacgaccagc aaccgggctc gtttcgtttt gctcacgttg
      481 cgcgcgacgt cgtgaactgt gcctggggct tcccaccagc tttctcctgc ctggtgggtc
      541 acgattgcgc ctccgtcgaa ctggttctcg acgattcctt cgagcacgta cgccaccacc
      601 gcaacatcgt gacgatggcg tgccgccgtg gcagctgggc cgagctcaac ggtgactgct
      661 tcgacgttgc gataattgcc tgcgggcagc acttgtttga ggagctcggt acgcataacc
      721 ggaggagcgc tcggttgctg cccggcatcc tgtggcgcga cgccaagcgt cagtgtgcct
      781 gacagcagca gggcgaggat tttggggtag ttctgttcca tgagtagctc ccttcccaca
      841 ggttggcctc gctgatcata ggctcttagc ttccggtatg cacccaggcg accggactgt
      901 cctcgagtct atccccgtca gcgagcgcta cgttgtcgaa cgggaactcg gccagggcgg
      961 catggcggtc gtatatctgg cgcgggaccg caagcacgac cgctccgtcg ccctcaagat
     1021 cttacgaccg gaaatcatcg ccgggctcgg caccgaacgc tttctgctcg agatccggat
     1081 cctcgcgcgg ctccagcacc cccacatcct cgccctgctg gattcgggtg ccaccgatga
     1141 gacgccttcc cggccgttct acgtcatgcc ctacgtggac ggcgagaccc tgcgccagcg
     1201 cctcacccgc gagggcccgc tcccggtgcc ggaggcgctg cggctggtgc aggagatcgg
     1261 ggaagcgctg cattacgccc acggccaagg gctgatccac cgtgacgtaa agcctgagaa
     1321 tgtcctgctg tctcagggcc acgcccaggt ggcggatttc ggaattgctc gcgccgcagg
     1381 cgtcgcggcc ggcgaccggt tgacccagac cgggttgagc atcgggactc ctatgtacat
     1441 gagtcctgag caggcctcgg gggagcgaga ggtcgacgcc cgggccgacc agtacagcct
     1501 ggcctgcgtg ctttacgagc tgctggcggg tcagccgcct ttcaccgggc ttaatgccgg
     1561 ggcggtgttg tcgcgccagc tgctcgaccc ggtgccgccg ctcacgacgc tccgcccggg
     1621 tgtttcggga tcggtacgcc gggcgatcga gcgcgcgctg gcgaaagtgc cggcagaccg
     1681 tttcggggac gtgctggagt tcctgacggc gttggacgcg ccggacgtcc cggcgcccga
     1741 gccggacaaa cgagcgatcg tggtgttgcc gttcgccaac ctgagccctg atcccgacaa
     1801 cgcctacttc gccgacgggc tgatggagga ggtgatcgcg gacctctcca gagtccgggc
     1861 gctcaccgtg atctcgcgga cctcggcgat caagctcaaa gacacgaatt gggacctccg
     1921 gcgcatcggg cgggagctca acgtccgtta cgtgctcgag ggcagcgtgc gcaaagcggg
     1981 ctcgaccctt cggatcaccg cccagttgat cgacgccgag accgacgcgc acctctgggt
     2041 cgagaagtac tcgggtaccg tggacgacgt gttcgacttg caggagcggc tctcacgtca
     2101 gatcgtcgag gcgctcagga tcaccctgtc accccccgag gaccgcgaga ttgcggagcg
     2161 gccgatcgcg gatatccggg cgttcgagta ttaccagcgc gcccgccagg aatactaccg
     2221 gcatacgcct gaggggatgg tcgcggcgcg cgcgctcgcg gaacacggcc ttgccatggt
     2281 gggccccaac gaggcgctct acggcatgct gggcaccgtg tacgcctggt cccccacctg
     2341 gctcggcggc gacga
//
LOCUS       DASYRV010000498         7138 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3726987, whole genome shotgun sequence.
ACCESSION   DASYRV010000498 DASYRV010000000
VERSION     DASYRV010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7138
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3726987"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(151..567)
                     /locus_tag="VGQ24_13355"
     CDS             complement(151..567)
                     /locus_tag="VGQ24_13355"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HEV8455881.1"
                     /translation="MLNIVKTAVGSLVFLLSSATFAVAQRVHEIRMDANPEKEVYRFS
                     PAQVTARPGDVLLFKVASGSPHSVVFEGTGLSETGRAALNGAMSRRSADLSSPLLTAE
                     GAEYRIVVPAIAPGTYSFFCLPHRAYDMRGQLRITK"
     gene            complement(975..1697)
                     /gene="lepB"
                     /locus_tag="VGQ24_13360"
     CDS             complement(975..1697)
                     /gene="lepB"
                     /locus_tag="VGQ24_13360"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: protein motif:HMM:TIGR02227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEV8455882.1"
                     /translation="MTARTAEHSRSFVIWIWDWTKSIVVALVVWFFLRTFLVEAFRIP
                     SGSMENTLLIGDFLFVNKALYGAEVPIIHARLPAVREPRRDDILVFDSVEEEGLKVVK
                     RLIGMPGDTLSMEDGELFRNGERVNEPYAVHSDPTRTEDPIQRAKMREWQLPHLVRRD
                     PNSYQPDLQEWGPIVVPPDSFFMMGDNRDSSYDGRYWGFLPRQNVRGRPLVVYFSYDP
                     GSWRAIPFLTAVRWGRLFTSPR"
     gene            complement(1757..3379)
                     /locus_tag="VGQ24_13365"
     CDS             complement(1757..3379)
                     /locus_tag="VGQ24_13365"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family metallopeptidase"
                     /protein_id="HEV8455883.1"
                     /translation="MSLQPGSWFRQTGRACVEAVLVGLLVGTPLAAQVTRPERSNFQE
                     TSSYADVLSFLDSLQRVTQDIRVGTLAVSPEGRRVPYVLASHPLISSPAEAHRSGKPI
                     VYLQANIHAGEVEGKEAAQMLLRDLGAGPLRPMLDQLVLLVVPIYNSDGNERMAAGEQ
                     NRPGQNGPAVVGRNTNGQGLNLNRDYVKMEAPETQGAAALLSAWDPDLFIDLHTTNGS
                     YHGYVLTYAPGLNPNSNPAADFVRNRFLPAVRERMQRRHRQRTFSYGNFRNQDPDSLA
                     QGWETYDGRPRFGTNWMGVRGRLAILSEGYSNADFRTRIAATYNFVREVLALAVEQRA
                     TIKSLIQASNRQRQDSISVRSVLGAPTVQEVIAEITEPAGDGTGGFARRKRTGVYRAV
                     RMPVFDRFVAARREAIPAAYLIPPRLHEVVELLRRQGVVVEALTEPWRARTDEFLIDS
                     VSVQPLFEGHRTVQAEGRWRSEPLDTALVAGWYLVRTEQPLGVLASYLLEPASDDGVV
                     TWNLLDRELQAGGTYPILRLQGSSRVPATAVP"
     gene            complement(3327..4853)
                     /locus_tag="VGQ24_13370"
     CDS             complement(3327..4853)
                     /locus_tag="VGQ24_13370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455884.1"
                     /translation="MRAATIAPPESLAMLAYAAAASRSGVMPLEGSTLVSQRSQHVMG
                     LYRRAELVGAARRTLESIRAAIPSDTTRARFDRIFRGRGTWVVDLHDAALAWAQSREA
                     RIGWESARQALTEAGWLPRGDSTDGAETIPRALYGLRVLAANDSAAFAAAQADLRRSD
                     PSSAAAVTLLLNGYTEGQRWYADAVGFFLTEPWASQRGTGRSIGELVRNDWRRVRPLS
                     PGSADLTPEIRSRLFGYPQAVPHYGVPPALFNRLVSADNEPAGQWLRRHGPAALLQAL
                     RWLPAGDTSLALLQFGRETVRLTTVPRQARESLNGFLEPGDVIAIDPGYSPLLALGAV
                     VHEWQHLVFRRFQLDDIAARLPERVMPVVSLPGVQPYVAEGFAEWSAERILDPLIVRW
                     PLLGLGELEKRAGLARESADDQHALGYALVRALAAVLNDPALTTRLLLRYAEDPSRID
                     TEPALRAAWRRHRGARDYVFAAAMRRVLIPEVTFTIEDGYPDVIATRILVPANGKGVR
                     "
     gene            5062..5388
                     /locus_tag="VGQ24_13375"
     CDS             5062..5388
                     /locus_tag="VGQ24_13375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455885.1"
                     /translation="MPDDPKPAPRRPIPPLMDRLGELCTAGRDSATYLWQVPNDEAVR
                     RKIGGILAEIKVEAAKGGRQEMGRLAVELETALAASASPQQVELLQDGFERMNRLWAA
                     AKSGLF"
     gene            complement(5385..6491)
                     /locus_tag="VGQ24_13380"
     CDS             complement(5385..6491)
                     /locus_tag="VGQ24_13380"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEV8455886.1"
                     /translation="MHLIILLLAAVTACKRAESTGKGPGGPGGPGGPGGGPPAMPVET
                     AAARSDTVVDAILATGQIEALQSIELRPDVEGRLIQILVREGSLVSRGTPLFKIDDAE
                     LKAQVDQITAERDLARQSLNRTRDLLSQKASSQSELERAEATMRSNEAQLDLLKVRLA
                     RTLVRAPFAGVMGQRSVSLGDYVTKDTKLAALQTVSPQRASFQVPERYADQLKVGQQV
                     SFRVASLPGRTFVGNVDFVDPIVQLPGRTITVKARVPNPRRELQSGMFIEARLATAVR
                     PSAVVVPEDAVIPLQGTNFVWVVADGKASRRQVELGVRTPGFVEIKKGVENAEQVVVG
                     GQERLAEGAPVQAKLVDRRPARAQEDVGEARSDR"
     gene            complement(6497..>7138)
                     /locus_tag="VGQ24_13385"
     CDS             complement(6497..>7138)
                     /locus_tag="VGQ24_13385"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEV8455887.1"
                     /translation="GPVDGVPADTTAAPELPLTLPEALRTALDQGPQYRTARANESAA
                     EAVLKSQRGDYLPTLSVGGLHQRYDTQLFPGAANISSLTFSISLPIWDDGLREIEITR
                     ARINRDVARAVRDDLERVIRRDVTDAYDVYQTSRVAVDLARVGVMVARETYRMQELRY
                     RSGASTILDLLDAQVNLAQAEAGLVQAQYANRLALAGLEAILGRRLFTNKDVP"
BASE COUNT         1269 a         2330 c         2355 g         1184 t
ORIGIN      
        1 tgaaccgccg agttctgaca ccacatatcc tcctgacgtg ccgccccggc caaccagaga
       61 ctcaccgctc cgacccgaaa tcggaggggt gggggcatga aaggaggaat tctcgcactg
      121 aggatagggt agcgctagta gtatcctgga ctacttcgta attcggagtt gccccctcat
      181 gtcatacgcg cggtggggca ggcagaagaa gctgtaggtg cccggggcta tcgcggggac
      241 cacgatccgg tattcggctc cctctgccgt gagcaagggg ctactcaggt ccgccgaccg
      301 ccggctcatg gcgccattca gggccgcacg cccggtttcg gagaggcctg tgccctcgaa
      361 aacgacgctg tggggggaac cgctcgccac cttgaagagg agcacgtcgc cggggcgagc
      421 agtcacctgg gcgggactga agcggtaaac ctccttctcg gggtttgcgt ccatccggat
      481 ctcatgaacc cgctgtgcca ctgcaaaagt agccgacgag aggaggaata cgagcgagcc
      541 caccgcagtt ttgacaatat tgagcatctg atctccaggt tatttccaaa aaccatcgat
      601 cctgcctttg cgccccggca aaggtttccg taaatttgtt gtgggtgggg tagccagatt
      661 cgtgccacta gtccccatca gaagggccga ctgtgggacg tcggggcatc aaggagtacc
      721 gagcgccgga ggcgctgatt ctgatcgcgg cggatcggga ccagaaacct ctggtatgcc
      781 cctcttgcgg ctcggtggac gtcgagcgag tacccgagcg atcgagctcc gaggatgcac
      841 ctggcggccg agttaccctg cactgtaccg catgcagccg cagtgccgcc tacatcgccc
      901 gtatgctcag ccgctcttcc ctcccagaag cacctcgacc acaggaacca gcgtagccgc
      961 ccgagcgatc ggccttatct gggcgaggtg aacagccgtc cccatcgtac cgcggtcaag
     1021 aaggggatcg ctcgccagct gcccgggtcg tagctgaagt agaccaccag ggggcgccct
     1081 cggacgttct gccgggggag aaaaccccag taccggccat catacgagct gtctctgttg
     1141 tcgcccatca tgaagaagga atccggcggc acgacgatcg gaccccactc ctgcagatcg
     1201 ggctgatagg agttcgggtc gcgacgcact aggtgaggga gctgccactc tcgcatcttg
     1261 gcgcgctgga tcgggtcttc cgtgcgagtc gggtccgagt gcacggcgta cggctcgttg
     1321 accctctcac cgttccggaa caactctccg tcctccatgc tcagggtatc gcccggcatg
     1381 ccgatcagcc gtttgaccac cttgagcccc tcctcctcga ccgaatcgaa gaccagaata
     1441 tcatcccggc gtggctcccg cacggcggga agccgcgcgt ggatgatggg tacctctgcc
     1501 ccgtagagcg ccttgttaac gaagaggaag tccccgatca ggagcgtgtt ctccatgctg
     1561 cccgacggga ttcggaacgc ctcgaccagg aacgtccgga gaaagaacca gacgacgagt
     1621 gccacgacga tcgacttggt ccagtcccag atccagatca cgaatgaccg ggagtgttcg
     1681 gcggtgcgcg cagtcatgaa ggaacgtcct cgattcaatg gaagtcggtc tgaaatttac
     1741 caccattccc ggcgtcctag ggaacggcgg ttgcggggac ccgggacgag ccctggagcc
     1801 gcaagatggg atatgtcccc ccggcttgca gctcgcggtc aagcaggttc cacgttacca
     1861 cgccgtcatc ggaagcaggc tcgagcagat aggaggccag cacgccgagg ggctgctcgg
     1921 tgcgcacgag ataccagcca gcgacaaggg ccgtatccaa gggctcactc cgccagcgcc
     1981 cctccgcctg aacggtcctg tggccctcaa acagcggctg aaccgacacg ctgtcgatca
     2041 ggaattcgtc cgtcctcgcc cgccacggtt ccgtgagcgc ctcgaccacg actccctggc
     2101 gccgcagcag ctcgacgacc tcatgcaatc gcggggggat caggtaggcg gcaggtatcg
     2161 cttcgcggcg tgccgccacg aaccggtcga agaccggcat gcgcaccgcg cgatagactc
     2221 cggtccgctt tcgtcgggcg aatccgccgg tgccgtctcc cgcgggctcg gtgatctcgg
     2281 caatgacttc ctgcaccgta ggtgctccaa gcaccgagcg aacggatatg gaatcctggc
     2341 gctggcggtt ggaggcttga atcagcgact tgatggtggc gcgttgttcc accgcgagag
     2401 ccaggacctc acggacgaag ttgtaggttg ccgcgatgcg ggtccggaaa tcggcgttgc
     2461 tgtacccctc gctcagtatt gccagcctgc cgcggacccc catccagttg gtgccgaacc
     2521 tcgggcggcc gtcgtacgtc tcccatcctt gtgccagcga atcgggatcc tgattccgaa
     2581 agttgccgta ggagaaggtg cgttgccgat ggcgccgctg cattcgctcc cgcaccgcag
     2641 gcagaaagcg gttccgcacg aaatcggccg ccgggttgga gttggggttc agcccggggg
     2701 cgtaggtgag gacatagcca tggtagctcc cgttggtcgt gtgcagatcg atgaagaggt
     2761 cggggtccca ggccgagaga agggccgcgg caccttgagt ctccggtgct tccatcttca
     2821 catagtcgcg gttgaggttc agcccctggc cgttggtgtt ccgtcctacc acggcgggcc
     2881 cattttggcc ggggcggttc tgctccccag ccgccatgcg ttcgttgcca tcggagttgt
     2941 agatcgggac gaccaggagc acgagttgat cgagcatcgg ccggagcgga cccgccccca
     3001 ggtcccgcag cagcatttgc gccgcctcct tgccttcgac ttcgccggcg tggatgttcg
     3061 cctgcagata cacgatgggc ttgccactcc ggtgcgcctc cgcggggctc gagatcagcg
     3121 ggtgcgaggc gagtacgtat ggcacccggc ggccttccgg actcaccgcc agcgtgccga
     3181 cccgaatgtc ctgggtcacc cgctggaggg agtccaggaa gctcaacaca tccgcgtacg
     3241 aagacgtctc ctggaagttg gagcgctcgg ggcgggtaac ctgggcagcg agaggtgtgc
     3301 cgacgagcaa cccgaccagg accgcttcaa cgcacgccct tcccgtttgc cggaaccagg
     3361 atccgggttg caatgacatc gggatagcca tcctcgatgg taaaagtgac ctcggggatc
     3421 aacactcggc gcatcgctgc ggcgaaaaca tagtcgcggg caccgcgatg tctcctccat
     3481 gcggcccgga gcgcaggctc agtgtcgatg cgggagggat cttcggcata ccgcagcaac
     3541 aaccgggtcg tgagagccgg atcgttcagc accgcggcaa gcgctcggac gagggcgtag
     3601 cccagggcgt gctggtcgtc cgcgctctcc cgagctaaac cggctcgctt ctcgagctcg
     3661 ccgaggccga gaagcggcca gcggacaatc agggggtcga ggatccgctc ggcactccac
     3721 tcggcaaacc cttccgcgac gtagggctga accccgggca ggctgacgac cggcatcacg
     3781 cgctccggga gccgcgccgc aatatcatcg agctggaacc gtctgaagac gagatgctgc
     3841 cattcgtgca ccaccgcgcc gagtgccagc agcggcgagt atcccgggtc gatggcgatg
     3901 acatcgcccg gctcgagaaa gccattcagg ctctcgcggg cctggcgggg gacggtggtc
     3961 agccgcaccg tttcgcggcc gaactggagg agggcaaggc tggtgtcgcc ggcaggcagc
     4021 caccgcaacg cctggagcag ggcagccggg ccatgccgcc ggagccactg gcccgccggc
     4081 tcgttgtcgg cgctcaccag acgattgaac agcgccggcg ggacgccata gtggggcacc
     4141 gcctgcgggt agccgaacag ccggcttcgg atttccggtg tcaagtctgc tgaacctggc
     4201 gaaagcggcc tgacccgacg ccaatcgttc cgaaccagct ctccgatgga gcggccagtt
     4261 ccccgctgag aggcccaggg ttcggtgagg aagaatccca ccgcgtcggc ataccaacgt
     4321 tgaccctcgg tgtagccgtt caagaggagc gtgaccgcag ctgcggagct ggggtccgat
     4381 cgccggaggt cggcttgggc agcggcaaac gccgcggaat cattggccgc aaggacccga
     4441 agcccgtaca gggcacgcgg gatggtctca gccccgtccg tgctgtcgcc ccgggggagc
     4501 cagcccgcct ccgtgagagc ttggcgagcc gactcccatc cgatccgcgc ctcccgggac
     4561 tgagcccacg cgagcgcggc gtcgtgcaga tcgaccaccc acgttccccg gcctcggaag
     4621 atccggtcga agcgtgcccg cgtggtatcg gatgggattg cggcgcggat cgactcgagc
     4681 gtgcggcgag cggcaccgac cagctcggca cgccggtaga gtcccatgac gtgttgagag
     4741 cgctgcgaga ccagcgtgct gccctcgagc ggcatgacac cgctgcgaga agctgccgcg
     4801 gcataggcga gcatggccag cgactccggt ggggcgatgg tcgcagcacg catccatgat
     4861 cccggaatcc ggaacagtga gtcgttgcgc ccggcgatga tttcacgcaa cgtgaagcgg
     4921 ggcaggctcg aaggctcggc ggcgctatgg ctgggtgcct gtgccttgag agctcgcccg
     4981 ggccacgctg gcaggagggc caagagcccg aagcacacgt ggtgccaggg tatgatcact
     5041 agtttgtgca gggaggctcc gatgcccgat gaccccaagc ccgccccacg aaggcccata
     5101 ccccccttga tggaccgcct gggcgagcta tgcacggcgg gtcgcgacag cgccacttat
     5161 ctgtggcagg ttccgaacga cgaggcagtg cgtcggaaga ttggcggtat cctggccgag
     5221 atcaaagtgg aggcggcaaa gggtgggcgc caggagatgg gtcggctggc cgtcgagctc
     5281 gaaacggcac tcgcggcgtc ggccagtccg caacaggtcg agttgctcca ggacggattc
     5341 gagcggatga accggctctg ggccgcggcg aagagcggtt tgttctagcg gtcgctccgc
     5401 gcctcgccga cgtcttcctg tgcccgtgcg gggcgccggt ccaccagctt ggcctggacc
     5461 ggtgcaccct cggcaaggcg ctcctggccc ccgaccacaa cctgctcggc gttctccact
     5521 ccctttttga tctccacaaa tccaggggta cggacgccga gctcgacctg ccgccggctg
     5581 gctttcccat ccgcgacgac ccaaacgaag ttcgtaccct gaagcggaat taccgcatct
     5641 tccggaacga cgacggcgct cgggcgcacg gccgtagcca gccgggcctc gataaacatg
     5701 cccgactgca gctctcgccg tggattcggc acccgggcct tgacggtgat cgtgcggccg
     5761 gggagctgca cgataggatc gacgaagtcc acgttgccaa cgaaggtccg acccgggagc
     5821 gacgccaccc ggaagcttac ctgctggccc accttcagct ggtcggcata gcgctccggc
     5881 acctgaaacg aggcccgctg aggcgagacg gtctggagcg cggcgagctt ggtgtccttg
     5941 gtgacgtaat ccccgaggct cacggaacgc tggcccatca cgccggcaaa cggcgcgcgg
     6001 acgagcgttc gggccagccg gaccttgagc aggtcgagct gtgcctcgtt gcttcgcatc
     6061 gtggcctcgg cgcgctccaa ctcggattgg gaggatgcct tctggctcag gaggtcgcgg
     6121 gtccggttga gcgactgacg ggccaggtcg cgctcggcgg tgatctggtc aacctgcgcc
     6181 ttcagctcgg catcatcgat cttgaacagc ggcgtgccgc gggacaccag cgaaccttcg
     6241 cgaaccagga tctggatcag ccggccttcg acgtcgggcc ggagctcgat ggactggagc
     6301 gcttcgatct gaccagtggc gagaatggcg tcgaccaccg tatcggatct ggcggccgca
     6361 gtttccaccg gcatggccgg tggtccaccc cccggcccac ccggacctcc cggaccacca
     6421 ggccccttcc cggtcgactc ggcgcgcttg cacgctgtta cggcggccag cagcaggatg
     6481 atgagatgca tcggtctcac gggacgtcct tgttcgtgaa gagtctgcgg ccgaggatgg
     6541 cctccaagcc cgccagggca agacggttgg cgtactgagc ctgcaccaga ccggcctccg
     6601 cctgggcaag attgacctgg gcatcgagca ggtcgaggat cgtgctggcg cccgagcgat
     6661 agcgcagctc ctgcatccga tacgtctcac gcgccaccat cactccaacc cgggcgaggt
     6721 ccaccgcgac ccggctggtc tggtacacat cgtacgcgtc ggtgacgtcg cggcgaatga
     6781 cgcgctcgag atcgtcccgc acggcccgcg ccacatcgcg gtttatccgc gcccgggtaa
     6841 tctcgatttc gcgcaggcca tcgtcccaga tgggcaacga gatgctgaag gtcagcgacg
     6901 atatattcgc cgccccgggg aagagctggg tgtcataccg ctggtgcaag ccgccgacgc
     6961 tcaacgtcgg caggtagtct ccccgctgcg acttgagaac ggcctcggcg gcgctctcat
     7021 tggctcgcgc ggtacggtac tggggaccct ggtccagcgc cgtacgcaga gcctccggaa
     7081 gagtgagtgg cagctccggc gccgccgtag tgtccgccgg cactccatcc accgggcc
//
LOCUS       DASYRV010000499         2015 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3727227, whole genome shotgun sequence.
ACCESSION   DASYRV010000499 DASYRV010000000
VERSION     DASYRV010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2015
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3727227"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..183
                     /locus_tag="VGQ24_13390"
     CDS             <1..183
                     /locus_tag="VGQ24_13390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455888.1"
                     /translation="DRHQNPPAGTQAGLMHQPLHSRRGRQPAADLAQEPKLTNSDSIL
                     IEEDSKRALVRTYDEG"
     gene            complement(740..1965)
                     /locus_tag="VGQ24_13395"
                     /pseudo
     CDS             complement(740..1965)
                     /locus_tag="VGQ24_13395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612078.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     misc_feature    complement(1574..1687)
                     /locus_tag="VGQ24_13395"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01497"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="AL1L pseudoknot; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /pseudo
                     /db_xref="RFAM:RF01497"
BASE COUNT          333 a          690 c          672 g          320 t
ORIGIN      
        1 gatcgtcatc agaatccacc ggctggaact caagccggtt tgatgcatca gccgcttcac
       61 tcacgacgtg gacgccagcc ggccgcagac ctggctcagg agcccaaact caccaatagc
      121 gacagcatcc tcatcgagga ggattcgaag cgggcgctcg tccggaccta cgatgaaggc
      181 tgagcgagac tctcccccgg ggcgccgttc gcggtaggga agaccgcaag agtcgaccat
      241 gtggtttcac gcgccaatgc tgccgtgggc ctgcggccct tgccaacgag gccgcgggtc
      301 accgaggacg ggcctcaccc actgggcgaa ctggagccgt cgccgccagg tgcgagcatc
      361 gtcttctcgc ctcccgtgcc acccacgtgc cacaagcagc ggtcaccagc ggtatgtagc
      421 ggtcagccac ggttactggg gagagggccg atggcctggg ctcaatggct ctgacctggg
      481 gtgggggagg aggccgaaac tgcatggcat gcaagtggtc gggctttgga tagccttgcc
      541 gtgcccggcc ggccgatccg gcccttggtc gcggaggacc ggagcgccgc aggcgtccgc
      601 gaccggacag gactggagcg acggcgaagc gagcgatggg gagctgggtg gcctgacagc
      661 aaggctcaca gggacctgac cggtcgctgt gcgcacgtgg ctgcagcaga gctacccctc
      721 gatgtgaatc gccccgggtt cattggaggc ctgggtgctt gagtcgaata gggtagctgg
      781 ggtcctcctc gctgtggaat gcggcctcga cctctgccgg tgggccatag ccaatgggct
      841 ccaggagccg gcggtggttg aaccagtcga cccactccaa ggtggcgtac tcgacctcat
      901 cgatgcctct ccaggggcca cgccggcgaa ccagctcggt cttgtacagc ccgatgatcg
      961 tctcggccag ggcgttgtcg tagctgtcgc cgcgggagcc caccgagcag gccgccccgg
     1021 cgtcggccag gcgctcggtg tagcgaatgg ataggtattg actgcccctg tccgagtgat
     1081 gcaccagccc ctccagctgg gcctgccggc accagatggc catctcgagc gcatccaggg
     1141 ccaggtcggt gcgcagcgag cgggaggcct gccagccgac cagaaagcgg ctgaaggcat
     1201 cgatgaccaa ggccacgtag acgaagccgg accaggtggc gacatgggtg aggtcagcca
     1261 cccacagctg gttcggcctg gcggccgagc agtcccgctc caccagatcc gccggccgag
     1321 gcgcggtcat gtccggcgtc gtcgtccggc gagctttccc acggccaaca ccttccaggc
     1381 ccagctcacc catcagccgc tcgacggtgc agcgggccac cgcgatcccc tcccggtgca
     1441 actgccgcca caccttgcgg gcgccataga ccccgaactg ctcggcatgg acccgggcga
     1501 tctccgcctt cagctcctgg tcacgcagcg tcctggccga gggcaacctg cgcttggcgc
     1561 cgtaataggt ggacggggcg atcggcagca cctcacagat cggctcgacc ccgaaccggt
     1621 ccctgttggc atcgatgtag gcgatcatct gctgggtcgg cggtcgagct ccgccgcgaa
     1681 gaaagccgag gcgctcttca ggatctcatt ggcccggcgc agctcccggt tctcccgctc
     1741 cagggccttg agccgctcgc gctcctcgct ggtcagcccc ggccgcaccc cgtcatcgat
     1801 ctcggcgcgg cggacccagt tgcgcagcgt ctcatgcgag atgccgaact tggccgcgat
     1861 ggagcagatc gctgcccact gcgaggggtg ctcgtcctgg tgctcgaaca ccatgcggac
     1921 ggcccgctcg cgcagctcct gcgggtatct cccctgtctg gtcatggctc caacctctca
     1981 cgagccggag cctccagaaa tcccggggcg gttca
//
LOCUS       DASYRV010000500         1725 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2279073, whole genome shotgun sequence.
ACCESSION   DASYRV010000500 DASYRV010000000
VERSION     DASYRV010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2279073"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..295
                     /locus_tag="VGQ24_13400"
     CDS             <1..295
                     /locus_tag="VGQ24_13400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455889.1"
                     /translation="SRRSSWPVPPPLGRGAAAGQLHHGQSRGSARPGFLLNRGEFTTI
                     DHPDAVLETAPYGINNRGQIVGLYERISGQAVEARGGGRNPERRASSEDLRSP"
     gene            complement(330..524)
                     /locus_tag="VGQ24_13405"
     CDS             complement(330..524)
                     /locus_tag="VGQ24_13405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455890.1"
                     /translation="MPTQIFTTMPILHENIPVGTDFVGGAKPLPLQPAGPANVTPGSD
                     FAGGAVPLTSEIHQGETEQQ"
     gene            839..>1725
                     /locus_tag="VGQ24_13410"
     CDS             839..>1725
                     /locus_tag="VGQ24_13410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455891.1"
                     /translation="MGESTSEDKDYVRWLKQESMLANASAIAGQFSGVGEVWQSPFAI
                     PNPAAAMAKSSVWCTAYPISMITKPGHSFLSTLGDDELWLALETIGINAVHTGPLKRA
                     GGVFGWEATPSIDGHFDRISTQIDKVFGTDVEFRRLCEVAAAHGGIVIDDIVPGHTGK
                     GPDFRLAEMGVGDYAGIYHMVEIPPEDWRLLPEVPPGKDSVNLDRQAEGRLQRAGYIV
                     GRMQRVIFHDPGIKDTNWSATAPVTGPDGVERRWVYLHYFKDGQPSINWLDPTFAGMR
                     LVIGDALHALGDLGAAALRL"
BASE COUNT          280 a          569 c          596 g          280 t
ORIGIN      
        1 ctcgcggcgc tcgtcgtggc cggtcccgcc accgctgggc cgcggagccg ccgccggtca
       61 gctgcatcac ggacaatccc gtggatccgc tcggcccggc tttctcctca accggggtga
      121 gttcactacg atcgaccacc ccgacgccgt cctggagacc gcgccctacg gcatcaacaa
      181 ccgcggccag atcgtcggcc tgtacgagcg catttcgggc caggcggtcg aggcgcgcgg
      241 tggtggacgg aatccggagc ggcgagcgtc cagtgaggac ctgcgatctc catgagccgc
      301 gctgcgtatt gtcctgcgcg gcacagcgct cactgctgct cggtctcgcc ctggtggatc
      361 tcggatgtca ggggcacggc gccgccggcg aaatcactgc ccggggtcac gttggcgggc
      421 ccggccggct gcagcggcag cggcttggcg ccaccgacga agtcggtgcc tacagggatg
      481 ttctcgtgga ggatcggcat ggtcgtgaag atctgagttg gcatgctggc aagactccaa
      541 gggctcgatt ggggaagttg tggctgggcc ggcttcgcca gcgcccacgc ccgacatcca
      601 ccgtacagga ccagttcgca tcgcgctccc ttctgcctgc ccgccgcgcc gtgggaccat
      661 gccacaaacc gccgcactct cggtggggtt caccctctcg acggcttggc cgtccgcacg
      721 acgctgaact cgcaggtgtg gaggcccagg ccgatgggta gtccccgccc aacgtgggcg
      781 aaccagcctg cgcagggccc tcagtctggc ccggctgctg tgagggagca cgagcgtagt
      841 gggcgagagc accagcgagg acaaggacta cgttcgctgg ctgaagcagg agtcgatgct
      901 tgccaacgcg agcgcgatcg ccgggcagtt ctcgggtgtc ggagaggtgt ggcagagccc
      961 gttcgccatc cccaatcccg cagcggcgat ggcaaagtcg tcggtctggt gcaccgcgta
     1021 cccgatctcg atgatcacca agcccggcca ctccttcctc agtaccttag gagacgatga
     1081 gctgtggctg gcattggaga ctatcggcat caacgccgtg cacaccggcc cgttgaagcg
     1141 ggccgggggg gtctttggct gggaggcgac ccccagcatt gacgggcact tcgaccggat
     1201 cagcacccag atcgacaagg tgttcggcac cgacgtggag ttccgccgcc tgtgcgaggt
     1261 ggcagcggcg cacggcggca tcgtcatcga cgacatcgtg cccgggcaca ccggcaaggg
     1321 accagacttc cggctggcgg agatgggagt cggggactat gccgggatct accacatggt
     1381 ggagatccca cccgaggact ggcggctgct gcccgaggtg ccacccggca aggactcggt
     1441 caacctcgac cgccaggccg agggccggct gcagcgggcc ggctacatcg tcggccggat
     1501 gcaacgcgtg atctttcacg acccgggaat caaggacacc aactggagcg cgaccgcgcc
     1561 ggtcaccggc cccgatgggg tcgagcggcg ttgggtctac ctgcactact tcaaggacgg
     1621 tcagccctcg atcaattggc tggatccgac attcgccggt atgcgcctgg tcattggtga
     1681 tgcgttgcac gcgctggggg atctcggcgc tgcagcgctg aggct
//
LOCUS       DASYRV010000501         4555 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2279787, whole genome shotgun sequence.
ACCESSION   DASYRV010000501 DASYRV010000000
VERSION     DASYRV010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4555
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2279787"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2532
                     /gene="clpB"
                     /locus_tag="VGQ24_13415"
     CDS             <1..2532
                     /gene="clpB"
                     /locus_tag="VGQ24_13415"
                     /inference="COORDINATES: protein motif:HMM:TIGR03346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HEV8455892.1"
                     /translation="FAALLEQDEGIVQPLLQKAGLNVTGIRQEIEREIARFPTQAGGG
                     GEPSASREVNRIFDRADAEAKKLGDAYVSTEHLLLAMVEEKGTTARSILSTQGVSADD
                     LRTALEDVRGSHRVTDQSPEEKYQALERYTRNLTDEARKGKLDPVIGRDEEIRRVMQV
                     LSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPESLRNRELVALDVGALLAGAKF
                     RGEFEERLKSVIKELTQSQGKYVTFIDELHTIVGAGAAEGAVDASNMLKPPLARGELH
                     VIGATTLDEYRKHIEKDPAFERRFQPVMVPEPNVADTIAILRGLKEKYEIHHGVKITD
                     NAIIAAATLSDRYIGDRFLPDKAIDLIDEAASRLRIEIDSLPQEIDEVERRIVQLEIE
                     RQALLKEKDKAAVERREALEREIAALREKSGAMKAQWQAEKSALSEIQQLKSEIESAR
                     AEIDQATRRGDLQKAAELRYGRLPELERRLAEDERRLHEVQAGAMYLKEAVDAEDIAE
                     IVSKWTGIPVSKMLESERERLTKLEEELSQRVVGQHAAVTAVANAVRRSRAGLQDQNR
                     PLGSFIFLGPTGVGKTETARALAEFLFDDERAMVRLDMSEYMEKHSVARMIGAPPGYV
                     GYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSQGRVVDFRNA
                     VIIMTSNIGSQYIVDAGAQLDPKGWERVEERVRDELRNHFRPEFLNRVDDIIVFRQLS
                     REDLVQIVDLQLERLEHMLAQRHIHIEVTPEAKAVIAAEGYDPVYGARPLKRVIQRRL
                     QNPIALELLQGNFHEGDTIRVARKGDELRFERVERPEPVPEMAGA"
     gene            2525..2992
                     /gene="tadA"
                     /locus_tag="VGQ24_13420"
     CDS             2525..2992
                     /gene="tadA"
                     /locus_tag="VGQ24_13420"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: protein motif:HMM:NF025793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HEV8455893.1"
                     /translation="MRRGTPSPSDLTGMQAALRVARAGSVREEVPVGAVIVADGDILA
                     EAHNETVQRRDPTAHAELLALQRALQKAGEDRLPMATMYITLEPCAQCAGAIVLAKVG
                     RVVFGAYDPRCGMAGSVYDLLRNPRTNHRPEVVGGLMAEECGDLLKRFFLSMR"
     gene            3024..3110
                     /locus_tag="VGQ24_13425"
     tRNA            3024..3110
                     /locus_tag="VGQ24_13425"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3058..3060,aa:Ser,seq:cga)
     gene            3225..>4555
                     /locus_tag="VGQ24_13430"
     CDS             3225..>4555
                     /locus_tag="VGQ24_13430"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEV8455894.1"
                     /translation="MADLRDRLQRGLADRYRVERELGRGGMATVFLALDLRHKRHVAL
                     KVLHPELAQTLGPERFQRELDTVARLQHPHILPVHDSGETAGQLWFTMPFVEGESLRD
                     RLRREQQLPVEVALRIAMDAARALQCAHEHGVIHRDVKPENLLLTKDGSTLVADFGIA
                     RALSAGDDRLTETGISVGTPAYMSPEQAAGDRTLDARTDVYALGAVLYEMLAGEPPFT
                     GPTAQAVIAKRFSGEVPRVRHVRPSVPGSVERAVTRALAPVRADRFTTAAQFADALVL
                     PLVTVPESAPALAAPSQPGRRAAGSGWRTRTAIRIAVAFVSGLLVTVSVAMLLWKQVY
                     RAGDSTGTHPERLAVLPFENLGPPEDEYFADGITDAVRGKLASLPGVQVIARGSSSPY
                     KKTPKTPQEVARELDVRYLLTGTVRWQKEAVGQSRVLVSPELVHVQQDGAP"
BASE COUNT          841 a         1450 c         1539 g          725 t
ORIGIN      
        1 ttcgcggcgc tcctggagca ggacgaaggg atcgttcagc ccctcctcca gaaggccggg
       61 ctcaatgtga ccggcatccg gcaggagatc gagcgggaaa tcgctcgctt tcccacccag
      121 gcgggcggtg gaggggaacc cagcgccagc cgtgaagtga atcgcatctt cgaccgggcg
      181 gatgcggagg ccaagaaact gggcgatgcc tatgtctcca ccgagcacct gcttctggcc
      241 atggtggagg agaaggggac cacggcccgg tccattctga gtacacaggg tgtctcggcc
      301 gacgatctgc gaactgcgct ggaggacgtt cgcgggtccc atcgggtgac cgatcaatca
      361 cccgaggaga aatatcaggc gctggagcgg tatacccgga acctgaccga tgaagcccgg
      421 aagggaaagc tggatccggt catcgggcgg gatgaggaga ttcgccgggt catgcaggtg
      481 ctctcccggc gaaccaagaa caatcccgtg ctgatcggcg agccaggtgt cggtaagacc
      541 gccattgtcg agggactggc gcagcgtatt gtgaacgggg acgtccccga atcattgcgc
      601 aaccgcgagc tggtggcgct cgacgtcggc gcgctcctgg ccggcgccaa gttccggggc
      661 gagttcgagg aacggctcaa gtctgtgatc aaggagttga cccagagcca gggcaagtac
      721 gtcaccttca tcgacgagct gcacaccatc gtcggtgccg gtgcggccga aggcgcggtg
      781 gacgcgagca acatgctcaa gccgccactg gcccgcggtg agctgcacgt cattggcgcc
      841 acgaccctgg atgagtaccg gaagcacatc gagaaggatc ccgcgttcga gcgccgcttc
      901 cagccggtca tggtgcctga gcccaacgtc gcggacacca tcgccatcct gcgcggcctc
      961 aaggaaaagt acgagatcca ccacggcgtg aagatcaccg acaacgccat catcgcggcg
     1021 gcgacccttt ccgaccgcta catcggcgac cggttcctcc ccgacaaggc gatcgacctc
     1081 attgacgagg cggcgagccg tcttcggatc gagatcgaca gcctccccca ggaaatcgat
     1141 gaggtcgagc ggcgtatcgt gcagctggag atcgagcgcc aggcgctgct caaggaaaaa
     1201 gacaaggccg ccgtggagcg ccgggaggcg ctggaacgag aaatcgccgc cctgcgggag
     1261 aagagcggcg ccatgaaggc gcagtggcag gcggagaaga gtgccctctc ggaaatccag
     1321 cagctcaagt ccgagatcga gtcggcacgg gcggagatcg accaggccac ccgccgcggg
     1381 gatctccaga aggcggccga gctgcgctat ggacgattgc ccgagctgga gcgaaggctg
     1441 gcggaggacg agcggcggct gcacgaggtg caggccggcg ccatgtacct caaagaggca
     1501 gtcgacgccg aagatatcgc cgagatcgtc tccaaatgga ccgggatccc ggtgtccaag
     1561 atgctggagt cggagcgcga gcggctgacc aaactggagg aagagctgag ccagcgggtg
     1621 gtcggtcagc atgccgcggt caccgcagtt gccaacgcgg ttcgccggag ccgcgccggg
     1681 ctgcaggatc agaaccgccc cctgggctcc ttcatctttc tgggccccac cggcgtagga
     1741 aagacggaga ccgcgcgcgc actggccgag ttcctgttcg acgacgagcg ggcgatggtc
     1801 cggctggaca tgtcggagta catggagaag cactcggtgg cccggatgat cggagctccg
     1861 ccgggatatg tgggatacga ggagggtggg cagctcaccg aggcggtgcg gcgccggccc
     1921 tacagcgtga ttctgttcga tgagatcgag aaggcgcatc ccgacgtctt caatatcctg
     1981 ctccagatcc tcgacgatgg ccggcttacc gacagccagg gccgggtggt cgatttccgg
     2041 aacgccgtga tcatcatgac gtccaacatc ggcagtcagt acatcgtcga tgccggcgcc
     2101 cagctcgacc ccaagggctg ggagcgggtg gaggagcggg tgcgcgacga gctgcgaaat
     2161 cacttccggc ccgagtttct caaccgggtg gacgacatca ttgtgttccg ccagctcagc
     2221 cgggaggatc tggtgcagat cgtggacctc cagctcgagc ggctggagca catgctggct
     2281 cagagacata tccacatcga ggtgaccccg gaggctaaag ccgtcatcgc ggccgaaggc
     2341 tacgatcccg tgtacggggc tcgtccgctc aagcgggtga tccagcggcg gctgcagaat
     2401 cccattgccc tcgagctcct gcagggaaat ttccacgagg gcgataccat tcgggtcgcg
     2461 cggaaaggcg acgagctcag attcgaacgg gtcgaacggc ctgagcccgt gcctgagatg
     2521 gccggtgcgt agaggcaccc cctctccgag tgacctcacc gggatgcagg cagcgctccg
     2581 ggtggcccgg gccggctcgg tccgggaaga agtccccgtt ggcgcggtca tcgtggccga
     2641 cggggacatt ctcgcagaag cccataatga aacagtgcag cgccgggatc ccacggctca
     2701 tgccgagctg ctcgccctgc agcgggctct ccagaaggcg ggtgaagacc gtcttcccat
     2761 ggccaccatg tacatcaccc tcgagccttg cgcccaatgc gccggagcca tcgtcctggc
     2821 caaggtaggt cgggtcgtct tcggggccta tgatccgcga tgtgggatgg ccggctcggt
     2881 gtacgacctg ctgcgaaacc cgcggaccaa ccaccggccg gaggtcgtcg gcggcctcat
     2941 ggccgaggaa tgcggagacc ttctcaagcg attctttctg agcatgcggt aagcagaaac
     3001 tgccttatct ttcccgccgg tctggacagg tgtccgagtg gctgaaggag ccggtctcga
     3061 aaaccggtat accctcacgg gtatcgtggg ttcgaatccc accctgtccg ttaattccct
     3121 ccgttcatca ctccctttta aaggtctggg gtccgtccta cccgtctggc tggccaggcc
     3181 atatgcttct gtcgtaccca gatcaccgtc acgacaggcc ttgagtggca gatcttcgag
     3241 accggctcca gcgcggcctg gctgatcgct accgcgttga gcgtgagctt gggcggggcg
     3301 ggatggccac agtcttcctc gcgctggacc tcagacacaa gcggcacgta gccctcaagg
     3361 tgcttcatcc ggagctggcc cagacgctcg ggcccgagcg cttccagcgc gagctcgaca
     3421 cggtcgcacg cctccagcac ccgcacatcc tccccgtgca cgactctggg gaaaccgccg
     3481 ggcaactctg gttcacgatg cccttcgtcg aaggggagag tctccgcgac cggcttcggc
     3541 gcgagcagca gctacccgtg gaggtcgcgc tccggatcgc catggacgct gcccgggcac
     3601 tccagtgcgc ccacgaacac ggcgttatcc accgcgacgt taagcccgag aatttgctcc
     3661 tcacgaagga tggcagcacg ctcgtggccg acttcggcat cgcccgggcc ctgagtgcgg
     3721 gcgacgaccg gctcacggag acggggatca gcgtggggac cccggcctac atgagcccgg
     3781 agcaggcggc gggcgaccgc acgctcgatg cccggaccga cgtgtacgcg ctcggcgcgg
     3841 tgctctacga gatgctagcg ggggagccgc cgttcaccgg acccacggcc caggcggtga
     3901 tcgccaagcg gttcagcggc gaggtccccc gcgtgcgcca cgtgcgccca agcgtcccag
     3961 ggagcgtgga gcgggcggtc acccgggcgc tcgccccggt gcgggccgat cgattcacca
     4021 ccgccgcgca gttcgccgat gcactggtcc tcccactggt cacggtgccg gagtctgccc
     4081 ccgctttggc ggcgccgagc cagcccggcc ggcgagctgc tgggtccggc tggcggacgc
     4141 gcactgccat tcggattgcg gtcgctttcg tcagcgggct cctggtgacg gtcagcgtgg
     4201 ccatgcttct ctggaagcag gtctacaggg cgggcgactc caccgggacc catcccgagc
     4261 gtctcgccgt gcttccgttc gagaaccttg gcccacctga ggatgagtac ttcgccgatg
     4321 gcatcacgga cgcagtgcgg gggaagcttg ccagtctacc tggtgtgcag gttatcgctc
     4381 gcggcagctc gagtccgtac aagaaaaccc caaagacgcc ccaggaggtg gctcgtgagt
     4441 tggacgttcg ctacctgctg actggcacgg tgcgatggca aaaggaagcg gtaggccaga
     4501 gccgggtcct ggtcagtccg gaactggtac acgtccagca ggacggcgct cccat
//
LOCUS       DASYRV010000502         2702 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1656919, whole genome shotgun sequence.
ACCESSION   DASYRV010000502 DASYRV010000000
VERSION     DASYRV010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2702
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1656919"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1503
                     /locus_tag="VGQ24_13435"
     CDS             <1..1503
                     /locus_tag="VGQ24_13435"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEV8455895.1"
                     /translation="AWLAARGVVKGDRVALVMPNCPQVIIAQLGVWKAGAVAVPLNPL
                     SSEEELAHALAGTGARAAVVLSRFYPKIKQLQPGTALEVVIATNIKEFLPRLLRLAYT
                     LLKERKEGDRVALAPGDVWFQAVTRARPAAPPRAGPTPSDAALLMLTGGTTGVPKAAL
                     LRHRGVLMAALQLNRWFRPVLKEWDDGIAFVFPPFHVAGNVGILGTALVGRNPAVLIP
                     NPRDLNDLLRTIQKARPAVLPAVPTLYNAMLAHPAVRAGKVDFSSVKLCVSGSAPLLA
                     ETKRRFEQLTGGRIIEVYSLTEACMASVGTPVMGTYKEGAVGIPLPDVDVRIVDVDDP
                     SQEVGPGEIGEIVIEAPQLMEGYWHNPEATREMLRNGRLYTGDLGSLDGDGYLTIADR
                     KKDLIKASGFQVWPREVEEVIATHPAVAEVGVAGVPDPHSGEAVMAWVVARKGVTPTE
                     EEIREHCRRHLAAYKVPKRVEFREALPKSAIGKLLRRELAREFRAAHNAL"
     gene            1642..2190
                     /locus_tag="VGQ24_13440"
     CDS             1642..2190
                     /locus_tag="VGQ24_13440"
                     /inference="COORDINATES: protein motif:HMM:NF015658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF305 domain-containing protein"
                     /protein_id="HEV8455896.1"
                     /translation="MLSTLACTSAAAQDYTAADVHFMSGMIYHHAQAVLIAGWAPSHD
                     ASPSLRALCERIVVGQGDEIALMQRWLRDRHEEVPDPSATRAMMPGMDPATMMPGMLT
                     ADQLAQLDRARGREFDRLFLTFMIQHHQGAITMVNALFGTGAGEQEKVFRFASDVFAD
                     QTTEIARMQKMLAALLFQRPGQ"
     gene            2217..>2702
                     /locus_tag="VGQ24_13445"
     CDS             2217..>2702
                     /locus_tag="VGQ24_13445"
                     /inference="COORDINATES: protein motif:HMM:NF019912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455897.1"
                     /translation="MEFSVRVAPTLRSLALTTGLCSLAACASSGGANMSTVAPNPDPR
                     VGLRAGLLNAAEASWNLRVVSKTPPPEQFAGITNSDLAFTGQYAIQGNYNGFQVWDIS
                     NPAKPTLKVGFVCPASQSDVSVYKNLLFVSGEGMGGRLDCGKEGVHDSVSASRLRGIR
                     IF"
BASE COUNT          439 a          900 c          926 g          437 t
ORIGIN      
        1 gcgtggctcg ccgcgcgcgg ggtcgtgaag ggcgaccgcg tcgcccttgt catgccgaac
       61 tgcccgcagg tgatcatcgc gcagctgggt gtgtggaaag ccggcgcggt ggccgtcccg
      121 ttgaatccgt tatcctcgga ggaggagctg gcgcacgccc tagctggcac cggcgcccgc
      181 gcggccgtgg tgctgagccg gttctatccc aagatcaagc agctccagcc gggcaccgcg
      241 ctcgaagtcg tgatcgcgac caacatcaag gagttcttgc cgcgcctgct ccggctcgcg
      301 tacaccttgc tcaaggagcg gaaggaagga gaccgggtcg ccctggcgcc cggggatgtg
      361 tggttccagg cggtgacccg ggctcggccg gcggcgccgc cacgcgccgg cccaactcca
      421 tccgacgccg cgctgctcat gctcacgggt ggcacgacgg gggtcccgaa ggcggccctg
      481 ctgcgacatc gcggcgtgct gatggcggcg ctgcagctca accgttggtt ccgccccgtc
      541 ctcaaggagt gggacgacgg catcgcgttc gtgttcccac cgtttcacgt cgcggggaac
      601 gtaggcatcc tcggcacggc cctggtgggg cggaaccccg cggtgctcat ccccaacccc
      661 agggacctga acgatctcct gcggacgatc cagaaggccc gtcccgccgt cctgcccgcc
      721 gtccctacgc tctataacgc catgctggcc catcctgccg tgcgggccgg caaggtggac
      781 ttctcatcgg tcaagctgtg cgtctcgggg tcggcgcccc tcctcgcgga aaccaaacgg
      841 cggttcgaac agctgacggg cgggcggatc atcgaggtgt actcgctgac cgaggcctgc
      901 atggcctccg tcggcacgcc cgtgatgggc acctataagg agggcgcggt cggcatcccc
      961 ctgcccgatg tcgacgtgcg aatcgtggac gtcgatgatc cgagccagga ggtcggaccc
     1021 ggcgagatcg gcgagatcgt gatcgaggcg ccgcagctga tggaaggcta ctggcacaat
     1081 ccggaggcga ccagggaaat gttgcgcaac ggccggctct ataccggcga tctggggtcg
     1141 ctcgacgggg acgggtatct caccatcgcc gaccgcaaga aggatctcat caaggcgagc
     1201 ggctttcagg tctggcctcg cgaggtggag gaggtcatcg cgacccaccc ggcggtcgcc
     1261 gaggtcggcg tcgcgggggt cccggacccg cattcgggag aggcggtgat ggcctgggtg
     1321 gtcgcgcgga agggcgtgac cccgaccgaa gaggagatcc gcgaacactg ccggcgccac
     1381 ctcgccgcct acaaggtccc gaagcgcgtg gagtttcggg aggcgctgcc caagtccgcc
     1441 atcgggaagc tgctgcggcg cgagctcgcc cgcgagtttc gcgcggcgca caatgccctg
     1501 tgaggccgtg actgcggcag gccctaggtt ccaatacgca ccacggctcg ggctcccttc
     1561 acaccaccat gacgtgccaa gccttccgct cgaaaatcgc gcgaggcatt atccgccgtg
     1621 gtgctaacga agactttggc agtgctctcc actctggcat gcacgagcgc cgccgcgcag
     1681 gactacaccg cggcggacgt gcacttcatg tccggcatga tctaccacca tgcgcaggcc
     1741 gtgctgatcg ccggctgggc accgagccac gatgcgagcc cgtcgctgcg cgccctgtgt
     1801 gaacgaatcg tggtgggcca aggcgacgag atcgcgctca tgcagcgctg gctccgcgat
     1861 cggcacgaag aggttcccga tccgagcgcg acacgtgcca tgatgcccgg catggatccg
     1921 gcgacgatga tgcccgggat gttgacggcg gaccagctgg cgcagctcga ccgcgcgcgg
     1981 ggacgggagt tcgaccgcct gttcctgacg ttcatgatcc agcaccacca gggcgcgatc
     2041 accatggtga atgcgctgtt cggcacggga gcgggagagc aggagaaggt cttccgcttc
     2101 gcgtcggatg tgttcgccga ccagaccacc gagatcgccc gcatgcagaa gatgctcgcc
     2161 gcgctgctct tccagaggcc cggtcaataa tccgtttcct ggaaaggaat cagcccatgg
     2221 aattctccgt cagggtcgct cccacgcttc ggtctctggc gctcaccacc gggttgtgct
     2281 cactcgccgc ctgtgcttcc tcgggcggcg cgaacatgtc gacggtcgcg cccaaccccg
     2341 acccccgggt cggcctacgc gcgggcctcc tgaacgcggc ggaagcatcc tggaatctgc
     2401 gggtggtctc gaagacgccg ccgcccgagc agttcgccgg gatcaccaac tcggatctcg
     2461 cgttcaccgg gcaatacgcg attcagggga actacaacgg gttccaggtc tgggacattt
     2521 cgaacccggc caagccgacg ctgaaggtcg ggtttgtctg cccggcgtcg cagagcgatg
     2581 tgtccgtcta caagaacctg ctcttcgtgt cgggcgaggg gatgggcggg cggctcgact
     2641 gcggtaagga aggggtgcac gactcggtca gcgccagccg gctgcggggg atccggatct
     2701 tc
//
LOCUS       DASYRV010000503        11998 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3727901, whole genome shotgun sequence.
ACCESSION   DASYRV010000503 DASYRV010000000
VERSION     DASYRV010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11998
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3727901"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1272
                     /locus_tag="VGQ24_13450"
     CDS             <1..1272
                     /locus_tag="VGQ24_13450"
                     /inference="COORDINATES: protein motif:HMM:NF019318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDIG domain-containing protein"
                     /protein_id="HEV8455898.1"
                     /translation="VLSAFWLLIMFYRRETYSHLREMVFFAALFAVVVLMTAVLTGIF
                     PGRPELVPIPFVAILVTMLYEGRIGVFAAVTLAILLDGQWALRESYTLFFGLVGGVAG
                     AIGIRVVRRRRHLYVTIGVVAGAGILATIAVGLTQGWSTSTIVGSCLLDIVIALASAA
                     LAMIVMPVAESATRITTDLTLLELSDLGRPLLRRLALEAPGTWAHSLAMANLCESACN
                     IIGANGLLARVGCYYHDIGKLASPGHFVENQGGGPNPHDEMRPQDSAHIIQSHVADGL
                     ALAEAAGLPEIVKAFIPEHHGTTYITYFLSRARGSDPDGRVDPADFRYPGPRPQSAET
                     AVAMLADSAEAAIRVLGNPTPEAVRNAIEHLVQQKLGSGQLDDAPLTLRDLDRIKREF
                     ARVMSGTYHKRIGYPRASGGIAPEFQSVERE"
     gene            1265..1681
                     /gene="ybeY"
                     /locus_tag="VGQ24_13455"
     CDS             1265..1681
                     /gene="ybeY"
                     /locus_tag="VGQ24_13455"
                     /inference="COORDINATES: protein motif:HMM:TIGR00043.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEV8455899.1"
                     /translation="MSEVVVNGRRLPLSRALVRRVVRAVLRAERRAALISVTFLGRDS
                     MRRLNAEHKGRDCPTDVLAFPLTDPSGQTIGDVYICSWVARQEARARGIPLREELIRL
                     VVHGTLHALGREHPEGPERTRSAMWRRQERYVEALA"
     gene            1678..2871
                     /locus_tag="VGQ24_13460"
     CDS             1678..2871
                     /locus_tag="VGQ24_13460"
                     /inference="COORDINATES: protein motif:HMM:NF015436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEV8455900.1"
                     /translation="MIAMLQLFIAPLVAALLTLWAAWLALAAESDADLPRALSGQLGS
                     TGSGTLSRNLHIAHLALLVLAGAAAGAAVAWWAWSPALGLLRLILAVLLVWVLGDLLP
                     RLLAAVAPELTVPARRAAAATLVPFRPLLRLATWADDRARARAPTRTTRQAGTAQRDM
                     LLGVFSLADTTVAEVMTPRIDIIAVDTAVERDEVVKTLRSSEHARLLVYDGHPDAVVG
                     VIYAKDILAIGPEDPRPWRALIRPAAFVPEGKTLDRQVRDFQRGPSHLAVVVDEFGGT
                     AGIVTLEDILEQIVGEIQDEYDTDEVAPIQVVSEDQWRVEGGVALSELESALGHSFDR
                     DDVSTVGGLVLAEFGRVPRSGEAIDVEGYRLIVEHVVRRRVKRIAVHRPPVEASVAPT
                     ERATR"
     gene            2868..4061
                     /locus_tag="VGQ24_13465"
     CDS             2868..4061
                     /locus_tag="VGQ24_13465"
                     /inference="COORDINATES: protein motif:HMM:NF015436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEV8455901.1"
                     /translation="MIWFAVMLGVTLTTFGAIAGTALITVSRAELTLAVGRRLRGTSS
                     SLAGLAQIDDYLTAASATTSLGVLLLGAAVPGLLAGASAPRFVVGVALLAVPLVLFAA
                     YLVPRWLTQPRAESVADRVIPILRPWSRVLGLLLPARTATRPTDLRSIWREGAAVGLE
                     EDSELVMVKGVMAFSGRPVREVMTPRTEIVAIEENAPLDEIRLVFAGSGYSRIPVIRG
                     TLDDIIGMVHAFDLFKLEPGDPLPVRPVAVTPASRSCGDLLLDMQRERRHLAIVLDEF
                     GGTLGIATLEDLLEELVGEIFDEHDEEVRPAPTATPTIFETDGNLSLEAIEERFGVSL
                     PSSHSTTVGGLLVELAGRIPNAGERFTLGSLEFDVVQASPTRVERLLIRADPTPAITL
                     SPSTS"
     gene            4058..5413
                     /gene="mgtE"
                     /locus_tag="VGQ24_13470"
     CDS             4058..5413
                     /gene="mgtE"
                     /locus_tag="VGQ24_13470"
                     /inference="COORDINATES: protein motif:HMM:TIGR00400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEV8455902.1"
                     /translation="MIKLQPQRVMIKLLDRMVELVRKGDIAHFIRRAHDFEPADLADV
                     LSALDDKERVAVVQALPPELSSQALAEMPEEAHAGETLAALDPGQAADIVEELDDDDA
                     ADMLRDLDRNQQEQILSEVEDRSEVDRLLRYDEETAGGRMTTHMVTVPDTASAEQARE
                     EIRRQAEEVEDFYEVFVVDRDHRLVGFLPFKDLVISRPERPVRAFMTPADVFVTPDLD
                     QEEVARLMARYNLPSVAVVDEHGRLLGRVTFDDVIDVVEAETTEDLLKFGGVSPDEEL
                     AAGWRPAVRSRLPWLSVNLATAFLAGGVVYLFQHTIQHTLALAVWMPVIAGMGGNAGT
                     QALAVTVRRLALGLIPVDVFTRVVGKEILVGIINGLVMGVAVGTVATLIGQGARLGIV
                     VFLAMTGNLMVAGFAGAFIPLVLERFGIDPAVASSIFVTTFTDVCGFLLLLGLAGMLL
                     L"
     gene            complement(5431..5892)
                     /locus_tag="VGQ24_13475"
     CDS             complement(5431..5892)
                     /locus_tag="VGQ24_13475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455903.1"
                     /translation="MGFSVAMALAIPLAIEVGTNEQELAITALAACVLQGVVFWSLRR
                     QYRRVRREMIAELRGMLKDRINNHLTIVLMSVTQRWEAPGSVKERELLEAAIAATAAV
                     SRVLEELSMESLRSWKAHYGMDEPGLKTAALRRERAAAASHTLDLRSDWES"
     gene            complement(6046..6426)
                     /locus_tag="VGQ24_13480"
     CDS             complement(6046..6426)
                     /locus_tag="VGQ24_13480"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding domain-containing protein"
                     /protein_id="HEV8455904.1"
                     /translation="MTRKLALAAGVLFAVVSAGTLAAQTAATSKPPSPGTMQHAPAAL
                     PKRQDSTTVRASAGAKTQQVAWTKDQIKEAQEGLAKAGFYKGKATGTFDRSTRNAIRK
                     YQKANKLPVTGRLDNDLLTRLHSS"
     gene            complement(6600..8000)
                     /locus_tag="VGQ24_13485"
     CDS             complement(6600..8000)
                     /locus_tag="VGQ24_13485"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEV8455905.1"
                     /translation="MTSSSGTAERPARLLLVDDDEAACRLLSEVLEREAYRVVSALST
                     DEAIAKLDQEGPFDAVLTDLRMPRKSGLDLLRTVRGRDPEALVLVLTAFGDAAAAGEA
                     IRAGAYDFISKPYDIQTLRETLDRALGRRRFARRRPAATPLGTAGEEPEGPALVGHSP
                     AIIEVMKTLARVAPSQATVLVLGETGTGKELVARTIHRWSERASRRFVAVNCSALAEG
                     LLESELFGHVRGAYTGAATSRPGLFREADKGTLFLDEIGDISPGLQARLLRALQEHEI
                     VPLGAETAVKVDVRVVAATHRDLPELVRQGRFREDLYYRLDVVSLSLPPLRERRQDIP
                     LLVDHFLRTLTSRHGRGPVAVDPEALRRLLGYDWPGNIRELQNVLERALLLAEQGVIG
                     PEHLATAVRPSAAALPEAPEALALRGLEEVEREHVIRVLAATGGNREESSRILGISRR
                     TLTRMIQRWGLPPRHG"
     gene            complement(7997..9577)
                     /locus_tag="VGQ24_13490"
     CDS             complement(7997..9577)
                     /locus_tag="VGQ24_13490"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEV8455906.1"
                     /translation="MRDSDVVDLDVVADSSAGPGASARQSLPVFYEPPGAGDAESESV
                     GQPMGLPRRLAFLTAVMSVLLVLGATEIALSWSARTRLEDFRLESVALANTLASLLVR
                     AAPTGNAESLTQSLEGWARHRITESQATVYLARGRTLVPIASSGTGPVRPPDPAAYPA
                     LARRNTGARLLAGPDPGWQVLVPLGAARPYGVLEVRVSTRRLQDWARQERQRAYLLAL
                     LSALLVALGVAVLTARWVGRPLAAIGSAMARAHGGTKGSPPAPEIGPPEFRELARRYN
                     RLREALTAREQESAARAMLLSLEERARGFDRIALVHETAAGFAHEIGTPLNTMSGHLQ
                     LLRDDLAGQEDETAFDRVRLLLAQVDRVAGIVRAALQRGTWPRPYVQTIELGEIVSRM
                     LRFLEPAFSDAGVRARLLPSPPVFASCDPALVEQILLNLLKNAIEALSPANSVGVVCG
                     REDAVTFIDIFDDGPGLDPEAEAHLFRPFSSTKVHGNGLGLSVSRQLARMLGGDLVRM
                     PSPRGVRWRLTLPESGRV"
     gene            complement(9574..10482)
                     /locus_tag="VGQ24_13495"
     CDS             complement(9574..10482)
                     /locus_tag="VGQ24_13495"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HEV8455907.1"
                     /translation="MSRRAWITLAVGIIACGFAVRFGVTFPWAKTMDALSDADWILLA
                     GAGLVNILSLMAKAGAWHLLLRRLTPIRAVTAQVATLIGAAVNSISISVSGEAARAQA
                     AGSRDGVPFGLAAASLVASRVVETLGLVVFLAVVLVMLPMWPGARTIGFILVGVSAAV
                     TVGYHLLPRRRWHPALARMAATGPGGLAAPVALGTLNWAIQWLTYHWSFVATGAAVTP
                     AVSLAALVMANIAGILRLTPGNIGVMQGSLVLGMRAFEMPPANALAAGLALQAVQVIP
                     VLAIGVAIMGAGGFRRLMARRATGAV"
     gene            complement(10479..11177)
                     /locus_tag="VGQ24_13500"
     CDS             complement(10479..11177)
                     /locus_tag="VGQ24_13500"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEV8455908.1"
                     /translation="MLEIGAAGAGLLLGTGIWGAYAPNSPVFGPVIGRGPRERVAFLT
                     FDDGPNPGVTERILEILQRESAPATFFMVGEHVERHPATAAVVALARQEIGNHTYSHV
                     KLHLASPSRVRDEIRRAHQAITGVTGQVPRSFRAPHGYRGPFVTRAIKPYHYRSFGWT
                     LGVWDSARPGAELIRARVRRGLRPGAIVLLHDGDGYDPAGDRWQTAAALPGIIRDVRD
                     AGYRLESLSTLAAA"
     gene            complement(11171..>11998)
                     /locus_tag="VGQ24_13505"
     CDS             complement(11171..>11998)
                     /locus_tag="VGQ24_13505"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEV8455909.1"
                     /translation="HGGLNPVLGLVAPDAAGDLDIPVVATFHSWFGRSALCRIFRRPL
                     QKRLDRHAAVIAVSQPVVDAHARYFEADWKIIPNGVDTSFFRPVSSAPSSDGDGNAEL
                     LFLGRLDPRNGLDTVLSAMPAVLERFPEVRLTIAGDGPLRSMYKRLAAPVERHVDFIG
                     SVNGNRPAVYSRADLYLCPTTKASFGITLLEAMACATPMVVSDITGFRELVSGGDEAL
                     LVPKSDPGAWANAVITLLRDQRRREQMGAAGLTKVARFAWPHVAQEVTAVYRSVLEC"
BASE COUNT         1918 a         4010 c         4100 g         1970 t
ORIGIN      
        1 gtcctcagcg cattctggct gctgatcatg ttctaccgcc gcgagaccta ctcccacctc
       61 cgggaaatgg tgttcttcgc ggcgctgttc gcggtcgtcg tcctcatgac cgcggtcctc
      121 accgggatct tccccgggcg ccccgagctg gtgcccatac ccttcgtggc catcctggtg
      181 accatgctgt acgagggacg catcggggtc ttcgcggcgg tgacgctcgc aatcctgctc
      241 gatggtcagt gggcgctgcg ggagagctac accctgttct tcggtctggt gggcggcgtg
      301 gccggcgcca tcgggattcg ggtggtgcgc cgtcgccgcc acctctatgt cacgatcggt
      361 gtggtggccg gggcagggat tctggcgacc atcgccgtcg ggctcaccca gggctggtct
      421 accagcacca tcgtcggcag ctgcctcctc gacatcgtca tcgcgctcgc gagtgcggcg
      481 ctcgcgatga tcgtgatgcc ggtggccgaa tcggccaccc gcatcaccac cgatctgacg
      541 ctgctcgagc tttccgatct gggccggccg ctgctccggc gtctcgcgct cgaggccccg
      601 ggaacctggg cccatagtct ggccatggcc aacctctgcg agtcggcctg caacatcatc
      661 ggcgccaacg gcctcctggc ccgggtcggc tgctactatc acgacatcgg gaagctggct
      721 agtcctgggc acttcgtgga aaatcagggt ggcggaccca acccgcacga cgagatgcgg
      781 ccccaggatt cggcgcacat cattcagagc cacgtcgccg atgggttggc gctggccgaa
      841 gcagccggac tgcctgagat cgtgaaagcc tttattcctg aacatcatgg caccacgtac
      901 attacctact ttcttagcag agccaggggc agtgaccccg atgggcgagt ggatcccgcc
      961 gattttcgct atcccggtcc ccgcccgcag tcggccgaga ccgcggtggc catgttggcc
     1021 gactcggcgg aggccgccat cagggtcttg ggcaatccga cccccgaggc ggtgcgcaac
     1081 gccatcgagc acctggtgca gcagaagctc ggatcggggc agctggatga tgctccgctc
     1141 acgctgcggg acctggaccg gatcaagcgc gagttcgccc gggtgatgtc ggggacctat
     1201 cacaaacgga tcgggtaccc ccgtgcgagc ggtgggatcg cgccggaatt ccagtcagtc
     1261 gagcgtgagt gaggtggtgg taaacggccg tcggctgcct ctctcgcgcg cgctcgttcg
     1321 tcgcgtagtt cgggccgtgc ttcgggccga gcgccgcgcc gcgctcatct cggtcacctt
     1381 ccttggccgc gattcgatgc ggaggctcaa cgcggagcac aaggggcgcg actgtcccac
     1441 cgacgtgctc gcctttccct tgaccgaccc ctccgggcag accatcggcg acgtgtacat
     1501 ctgttcctgg gtcgccaggc aggaggcgcg ggcgcggggc attcccctgc gggaggaatt
     1561 gatccggctg gtagtgcacg gaacccttca cgcgctgggc cgggagcatc ccgagggacc
     1621 ggagcgtacc cgctcggcga tgtggcgccg gcaggagcgc tatgtggaag cgctcgcatg
     1681 atcgccatgc tgcagctctt catcgcaccg ctggtggcgg cgctgttgac cctgtgggct
     1741 gcgtggctgg cgctggcggc ggagtcagac gccgatcttc cccgcgctct gagtggccag
     1801 ctcgggtcca ccggctccgg caccttgtcg agaaacctgc acattgctca cctcgccctg
     1861 ctggtgctcg ccggcgcggc ggccggcgcg gcggtggcat ggtgggcgtg gtccccggcg
     1921 ctggggctgc tccgcctgat cctggccgtg cttctggtct gggtgctcgg cgacctgctg
     1981 cctcgtctgc tcgccgccgt cgcacccgag ctcaccgtac ctgcccggcg cgcggccgcg
     2041 gccaccctgg tgccattccg tccgctgctt cggctcgcga cgtgggccga tgaccgggcc
     2101 cgggcccggg ctccgacccg cacgacccgg caggcgggca ccgctcaacg cgacatgctc
     2161 ctgggtgtgt tctccctcgc cgataccaca gtcgcggaag tcatgacgcc tcggatcgac
     2221 atcattgcgg tggacactgc ggtcgagcgg gacgaggtgg tgaagacgct ccgcagctcg
     2281 gagcacgcac ggctgctcgt ctacgatggt catcccgacg cggtcgttgg ggtgatctac
     2341 gccaaggaca ttcttgctat cggcccggag gacccgcggc cctggcgcgc cttgatccgg
     2401 ccggcggcat tcgtgcccga gggaaagacg ctcgaccggc aggtgcgcga ctttcaacgg
     2461 gggccgagtc atctcgcggt ggtggtagac gagttcggcg ggacggcggg gatcgtcacg
     2521 ctggaggata ttctcgagca gatcgtgggc gagatccagg acgaatacga caccgacgag
     2581 gtagccccga ttcaggtggt gagcgaggat cagtggcggg tcgagggtgg cgtggcgctc
     2641 tccgagctgg agtccgccct cggccacagc ttcgatcggg acgacgtgag caccgttggg
     2701 ggcctggtgc tggcggagtt cgggcgggtg ccgcggtccg gcgaggcgat cgatgtcgaa
     2761 ggctaccgtc tgatcgtcga gcacgtcgtt cgccgccggg tgaagcggat cgcggtgcac
     2821 cgcccgccgg tggaggcctc ggtggcgccg acggaacgag ccacccgatg atctggtttg
     2881 ccgtcatgct gggcgtcacc ctcaccacct tcggcgctat tgccggaacg gcgcttatta
     2941 cggtaagccg ggccgagctg accctcgctg tcggtcgccg cctgcggggc acgtcctcct
     3001 cgctcgccgg tctggcccag atcgacgact acctcacggc cgcatccgcc accacatcac
     3061 tcggcgtctt gctgcttggc gccgccgtgc ccggccttct ggccggcgcc agcgcacccc
     3121 gcttcgtggt gggcgtggcg ctgctcgccg tgcccctggt gctgtttgcg gcctacctgg
     3181 ttcctcgatg gctcactcag ccgcgggccg aaagcgtggc cgaccgggtc atccccatcc
     3241 tccgtccctg gtcccgggtc ctcggtctgc tgctgcccgc ccggacggcc accaggccca
     3301 ccgatttgcg ttccatctgg cgggagggag ccgccgtggg gctggaggag gatagcgagc
     3361 tagtgatggt gaaaggcgtc atggcgttca gcgggcggcc ggtgcgcgag gtaatgacgc
     3421 cacgcaccga gatcgtggcc atcgaggaga atgccccgct ggacgagatc cggctggtct
     3481 ttgccggcag cgggtacagc cggatcccgg tgatccgggg caccctggat gacatcatcg
     3541 gcatggtcca cgccttcgat ctgttcaagc tcgagccggg agaccctctg ccggtgcgcc
     3601 cggtggcggt gaccccggcg agccgcagct gcggcgatct gctgctcgac atgcagcggg
     3661 agcggcgcca tctcgccatc gtgctcgatg aattcggagg caccctgggc atcgcgaccc
     3721 tggaagacct gctggaggag ttggtcggag agatcttcga cgagcatgac gaggaggtcc
     3781 ggcctgctcc cacggccacg ccgaccatct tcgagaccga tggcaatctg tccctcgagg
     3841 ccatcgagga gcggtttggg gtgtccctcc cgtcgagcca ttcgactacg gtgggcggcc
     3901 tgctggtcga gctggcgggc cggattccga acgcgggcga gcggttcacc ctcggaagcc
     3961 tcgaattcga cgtggtccag gcatcaccca cccgggttga gcgcctccta atccgcgccg
     4021 atcccacacc cgcaatcacc ctcagcccca gcacgtcgtg atcaagctgc agccccagcg
     4081 cgtcatgatc aagctgctcg accggatggt cgagttggtc cgcaagggcg atatcgcgca
     4141 cttcatccgt cgggcgcacg atttcgagcc ggcggatctg gcggacgtgc tctccgctct
     4201 cgacgacaaa gagcgggtcg ccgtggtcca ggcgctgccg cccgagctct ccagccaggc
     4261 gctggcggag atgccggagg aggctcacgc gggggagact ctcgctgcgc tggatccggg
     4321 gcaggcggcc gacatcgtcg aggagctgga tgatgacgac gcggccgaca tgctccgcga
     4381 cctggatcgg aaccagcagg agcagatcct ctcggaagtg gaggaccggt ccgaggtaga
     4441 tcgcctgctc cggtacgatg aggagaccgc gggcggccgg atgaccaccc acatggtgac
     4501 cgtgcccgat acggccagcg cggagcaggc acgggaggag attcgccggc aggccgaaga
     4561 ggtcgaggat ttctacgagg tgttcgtggt ggaccgcgac catcgactgg ttggcttcct
     4621 gccgttcaag gatctggtga tcagccgccc cgaacggccg gtgcgggcgt tcatgacgcc
     4681 agcggacgtc ttcgtgaccc cggacctcga ccaggaagag gtggcgcgtc tgatggcgcg
     4741 ttataacctc cccagcgtcg cggtcgtgga cgagcacggt cggctactcg gccgggtaac
     4801 cttcgacgac gtcatcgacg tggtggaagc cgagacgacg gaagacctgc tcaagttcgg
     4861 tggcgtctca cccgacgagg agctggcagc cggctggagg ccggcggtac ggagccggct
     4921 gccatggctc tcggtcaacc tggccactgc ctttctcgcc ggcggcgtgg tctacctctt
     4981 tcagcacacg atccagcata cactcgcgct ggcggtgtgg atgccggtga tcgccgggat
     5041 gggtggtaac gcgggaaccc aggcgctcgc ggttacggtc cggcgactcg ccctgggact
     5101 gatcccggtg gacgtcttca cccgagtggt tggtaaggag atcctggttg gcattatcaa
     5161 cggcctcgtg atgggggtgg cggtcggcac ggtggccacg ctcatcgggc agggcgcccg
     5221 gctggggatc gtggtcttcc ttgccatgac cggaaatctg atggtggcgg gatttgcggg
     5281 tgcgttcatt cccctcgtgc tcgagcgatt tggcatcgat cccgccgtcg cctcgtcgat
     5341 cttcgtgacc accttcaccg acgtatgcgg gttcctgctg ctgctcggcc tcgcaggaat
     5401 gctgctgctc taaattcggg gggcttggtc tcacgattcc cagtccgagc gtagatccaa
     5461 tgtgtggctc gctgccgccg ctcgctctcg ccgcaaggct gcggtcttaa gccccggctc
     5521 gtccatcccg tagtgcgctt tccaggagcg caacgattcc atcgacagct cctccagcac
     5581 ccgcgatact gcggcggtcg cggcaatcgc ggcttcgagc agctcgcgtt ccttcaccga
     5641 ccctggagcc tcccaacgct gggtgaccga catcagcacg atggtcaggt ggttgttgat
     5701 ccggtccttc aacatcccgc gcagctccgc gatcatctcc cgccgcaccc ggcgatactg
     5761 tcgccggagc gaccagaaca ccacgccctg cagcacgcac gcggcgagcg cggtgatcgc
     5821 gagctcctgt tcgttggtgc cgacctcgat cgcgagaggg atcgcgaggg ccatcgccac
     5881 gctgaacccc atcaggtaca gctcgaggtt ccggcctgca tggtgcccca ggctacgcag
     5941 tacgtcatcc tccgcaggaa gacgcccctc cgattcgaag gggcgtgagg tggacagccc
     6001 ggggccgccg gactgcccgg agtggtggga agaagagccg ttgtttcagc tcgagtgcag
     6061 tctcgtcagc aggtcattat ccagccgtcc ggtgaccgga agcttgttgg ccttctggta
     6121 cttgcggatc gcattccggg ttgagcggtc gaacgtgccc gtcgcttttc ccttgtagaa
     6181 cccggccttg gccaggccct cctgcgcttc cttgatctga tccttggtcc acgcgacctg
     6241 ctgcgtcttc gctccagccg aggcgcgcac cgtggtgctg tcctgtcgct tcggtagtgc
     6301 cgccggagca tgctgcatcg tcccggggct tgggggcttg ctggtggctg cggtctgggc
     6361 cgcgagagtg ccggcggata cgacggcgaa cagaacgccg gcggcgagcg cgagcttgcg
     6421 ggtcatacct tcctccttca gggtaccgcg acgccgcgga cgtggcgtcg catgtggtgc
     6481 catggaggaa ggcaatcact atgccagcag catacccctg aagatcccgc gtaccgagac
     6541 tcatagcgtg ggatgtcagg ttctggcgtg ccactctgtc gcgggaggac agaatgtcct
     6601 cacccgtgcc gaggaggcag cccccagcgc tggatcatgc gggtcaatgt tcgccgggaa
     6661 atacccagaa tgcgggagct ttcttcgcgg tttccaccag tcgcggcgag gactcggatc
     6721 acgtgctcgc gctcgacctc ctcgaggccg cgcagggcaa gggcctcggg cgcttcgggc
     6781 agcgccgcgg cggaaggacg gacggcggtg gcgagatgtt cggggccgat cacgccctgt
     6841 tccgccagaa gcagcgcgcg ctccagcaca ttctgcagct cccgaatgtt gcccggccag
     6901 tcatagccga gcagccggcg caatgcctcg ggatcgacgg ccaccggacc acgcccatga
     6961 cgcgacgtga gggtacgcag gaagtgatca acgaggagcg ggatatcctg acgccgctcc
     7021 cgaagcggcg ggaggcttag cgacaccacg tcgagccgat agtacaaatc ctcccgaaac
     7081 cggccctgcc gcaccagctc cggaagatcg cggtgcgtgg ccgcgaccac ccgcacatcc
     7141 accttgaccg ctgtctcggc cccgagcggg acgatctcgt gctcctgcag ggcgcgtagg
     7201 aggcgtgcct gcaggccggg cgagatatct ccaatctcgt cgagaaaaag agtgcccttg
     7261 tccgcctcgc ggaagagacc gggtctcgag gtggccgcac cggtataggc acccctcacg
     7321 tggccgaaca actcgctctc gagcaaacct tcggcgagcg cggagcagtt caccgccacg
     7381 aacctgcggc tggcgcgctc cgaccagcga tgaatcgtgc gggcgacgag ctccttgccg
     7441 gtgccggtct cgcccagtac caggaccgta gcctgagagg gggcaacccg ggcgagcgtc
     7501 ttcatcacct cgatgatcgc cgggctgtga cctaccagtg ccggtccctc cggttcttca
     7561 cccgcggtgc ccagaggggt cgcagccggg cgtcgccggg cgaagcgcct ccggcccagc
     7621 gcgcggtcca gcgtctcacg gagcgtctgg atatcgtaag gcttactgat gaagtcgtag
     7681 gcgccggcgc ggatggcctc gcccgccgcg gcggcatcac cgaacgccgt gagaaccagc
     7741 accagggctt cagggtcccg accacgcacg gtgcggagca gatcgaggcc gctcttcctg
     7801 ggcatccgca ggtcggtgag gaccgcatcg aagggaccct cctgatccag cttcgcaatc
     7861 gcctcgtcgg tggagagcgc cgacaccacc cggtacgctt cacgctcgag cacctccgag
     7921 aggaggcggc aggccgcctc gtcgtcgtcc acgaggagga ggcgagcggg ccgctcggcc
     7981 gttccgctgg agctggtcac acccgccccg attccggcag cgtaagccgc caacgtaccc
     8041 cgcgcgggct gggcatgcgc accagatcgc cacccaacat gcgcgccagt tgacggctga
     8101 cggacaaacc aaggccattc ccatggacct tggtgctgga gaacgggcgg aacaggtggg
     8161 cctcggcttc cgggtcgagg ccggggccgt cgtcgaagat gtcgatgaag gtcacggcgt
     8221 cttcccgacc gcacacgacg ccaacgctgt ttgcgggtga gagtgcctcg atcgcgttct
     8281 tcagcaggtt gagcaggatc tgctcgacca gtgccgggtc acagctcgcg aagactgggg
     8341 gcgaggggag cagtcgcgcc ctgaccccgg catcgctgaa tgccggctcc agaaatcgca
     8401 gcatgcggga cacgatctcg ccgagctcga tggtctgcac gtaggggcgg ggccaggtgc
     8461 cccgttgtag cgccgcccgc acgatccctg ctacccgatc aacctgcgcg agaagcaggc
     8521 gaacccggtc gaacgcggtc tcgtcctcct ggcctgccag gtcgtctctc agcagctgga
     8581 ggtggccgct catggtattg agcggggttc cgatctcatg ggcgaatccc gcggcggtct
     8641 catgcaccag cgcgatccgg tcgaacccgc gagcccgttc ttcgagcgag aggagcatgg
     8701 cacgagcggc gctctcctgc tcccgggcag taagtgcctc gcgcagtcga ttgtaccgtc
     8761 gcgccagctc ccggaactcg ggaggaccga tttcgggagc gggtggtgaa cccttggtgc
     8821 cgccatgcgc ccgcgccatg gcgctgccga tcgcggccag cggccggccg acccagcgag
     8881 cggtcagcac cgcgacgccc agcgccacca gcaatgcgga gagaagggca agcaggtagg
     8941 cacgctgtcg ttcctgtctg gcccagtcct ggagccggcg ggtggagact ctgacctcga
     9001 gaaccccgta ggggcgcgcc gctccgagcg gaaccagaac ttgccacccc gggtcggggc
     9061 cggccagcag gcgtgccccg gtgttccgcc gggcgagggc gggatacgcg gcagggtcgg
     9121 gcggccggac cgggccggtt ccgctcgacg caatcggaac cagcgtcctc ccgcgggcca
     9181 ggtagaccgt ggcctgcgat tcggtgatgc gatggcgagc ccatccctca aggctttgtg
     9241 tcagactctc ggcattgccc gtgggggcgg cgcgcaccag gagcgaggcg agggtattgg
     9301 ccagtgccac cgactccagc cggaaatcct ccagccgggt ccgggcagac caggaaaggg
     9361 cgatctcggt tgcgccgagc acgagcagca ccgacatgac ggcggtgaga aacgccagcc
     9421 ggcgcggcag ccccatcggc tgccccaccg actcgctctc cgcgtcgccg gcgccgggcg
     9481 gctcgtaaaa cacgggaagg gattggcgag ccgatgcccc ggggccggcg ctcgagtcgg
     9541 ctactacgtc gaggtccacc acgtcactgt ccctcacacc gcacctgtcg cgcgtcgcgc
     9601 cattagccgc cggaagcctc cggcacccat gatcgccacg ccgatcgcga gtaccggaat
     9661 gacctgcacc gcctgcagcg ccaggcccgc ggcgagcgcg ttggccggcg gcatctcgaa
     9721 ggcgcgcatg ccgagcacga gcgagccctg catgacaccg atgtttccgg gcgtgaggcg
     9781 caggatgccg gcgatgttgg ccatcaccag tgcggccagt gagaccgccg gggtgactgc
     9841 cgccccggta gccacgaaac tccagtgata ggtgagccac tggatggccc agttgagtgt
     9901 gcccagggca acgggcgcgg cgagtccacc cggaccggtg gcagccatcc gcgccagggc
     9961 agggtgccag cgcctccggg gcaggagatg gtagcccacc gtcaccgcgg ctgatacacc
    10021 gacgagaatg aatccgatcg tgcgagcacc cggccacatg ggcagcatga ccaacacaac
    10081 cgcgagaaac acaaccaggc ccagggtttc gaccacacga ctggcaacca gcgatgcggc
    10141 ggccaggccg aacggcaccc catccctcga tccagcggcc tgcgcccgcg ccgcttcgcc
    10201 gctgaccgag atgctgatgg aattcacggc agcgccgatc aaggtggcaa cctgcgctgt
    10261 cacggcgcgg atgggcgtga ggcggcgaag gagaaggtgc caggcgccgg ccttggccat
    10321 cagcgagaga atgttcacca ggcctgctcc tgccagcagg atccagtcgg catcgctcaa
    10381 ggcatccatg gttttggccc acggaaaggt cacaccgaac cgaaccgcga acccacaggc
    10441 gatgatgccg accgccagcg tgatccaggc tcggcggctc aagctgccgc cagcgtcgag
    10501 agtgactcca gccggtagcc ggcatcgcgg acatctctaa tgatgcctgg gagcgcggcg
    10561 gcggtctgcc aacgatcccc ggccggatcg tacccgtcgc catcgtgcaa gagcacgatc
    10621 gccccgggcc ggagcccacg gcgaacccgg gcgcggatca gctccgctcc gggccgggcg
    10681 gagtcccata cgccgagtgt ccagccgaat gatcggtagt ggtagggttt tatcgcgcgg
    10741 gtgacgaacg gaccccgata gccatgcggc gcgcggaagc tcctggggac ctgtcccgtc
    10801 acgcccgtga tcgcctggtg ggctcgccgg atctcgtccc gaacccggct gggactggcg
    10861 aggtggagct tgacatgtga gtacgtgtga ttgccgatct cctgccgggc cagagccacc
    10921 actgcggcgg ttgccggatg ccgctcgacg tgctcgccga ccatgaagaa tgttgctggg
    10981 gcgctctccc gctggaggat ctcgaggatg cgttccgtga cgccagggtt cggcccatcg
    11041 tcaaacgtca ggaaagcgac tcgctcgcgt ggaccccggc cgatcaccgg cccgaacacc
    11101 gggctattcg gggcatacgc tccccagatt cctgtgccaa gcaggaggcc tgccccggcg
    11161 gcgccgatct ctagcattcc agaaccgaac ggtacactgc cgtgacctcc tgagccacgt
    11221 ggggccaggc aaatcgggcg actttggtga gaccggcggc tcccatttgt tcgcgacgac
    11281 gctggtcccg gagcagcgtg atgacggcat tggcccacgc gcccggatcg ctcttgggga
    11341 caagaagagc ctcatcaccg ccggacacca gctctcgaaa gccagtgatg tccgagacta
    11401 ccatcggcgt tgcgcaggcc atggcctcga gcagggtgat gccgaatgac gccttggtcg
    11461 tcggacagag atagaggtcg gcccgggaat agaccgccgg cctgttgccg ttgacgctgc
    11521 cgatgaagtc gacgtggcgc tcgaccggag ccgccagccg cttatacatc gaccggagtg
    11581 ggccatcccc ggcaatggtg agtcgtacct cagggaatcg ctcgagcact gcaggcatgg
    11641 cggagagcac cgtgtcgagg ccgttgcggg gatccagccg gccgagaaag aggagctcgg
    11701 cattgccgtc gccgtccgag gacggagccg aggagaccgg ccggaagaag gacgtgtcca
    11761 ccccgttggg gatgatcttc cagtcggcct cgaagtagcg ggcgtgcgcg tcgaccacgg
    11821 gctggctcac cgcgatgacg gccgcgtggc ggtccagccg cttctgcagc ggcctccgga
    11881 agatccggca caacgctgac cggccgaacc aggagtgaaa cgtggcaacc acgggaatat
    11941 cgagatcgcc ggcggcgtcg ggcgcaacca ggcccaagac cgggttgagc ccaccgtg
//
LOCUS       DASYRV010000504         2810 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2394869, whole genome shotgun sequence.
ACCESSION   DASYRV010000504 DASYRV010000000
VERSION     DASYRV010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2810
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2394869"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2169
                     /locus_tag="VGQ24_13510"
     CDS             <1..2169
                     /locus_tag="VGQ24_13510"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEV8455910.1"
                     /translation="GTITLTSSLMARAKSPSAAASSAIPLLPRTKLSRSLHGILHEQP
                     DLSTRRQQRPHRAPEYTANDLIVTFRARSIGAPPLGSGALALRSTAAVAGAGIRARLV
                     PHIAAERLMVRGVSPAILAARIRVPAGADLKRIAARLLSDPAVAGVDRNLILRLDGES
                     RRSNDPLYPFQAWHYGMIDAPEAWSITTGSTSVLVAVVDDGIRFDHPAMSANLTSDGY
                     DFVSNLSIDVCGGGTSTLSGDGDGYDPDPTIPAAYDFDPDLECIAGLLETGNHGLHVA
                     GTIGAVGNDGLGVSGLNWTVRIRPVRVLGVDGEGTAYDVAQGILYAAGLPADDGAGGV
                     VQAATGASIINLSLGGPGDFPVLANAVTAASNAGALIVAAAGNTGTSVPQFPAAYPEV
                     LSVSAVGPDRQFASYSSFGSTVDIAAPGGDFADGDVSFGVISTAWDFVNGQPVYASNN
                     GTSMAVPHVAGVAGLVLAASPGLSAAQLRSRLLDFAVDAGAAGPDNRYGAGIVNARNS
                     LAQNLAPTRQLRARLYDALTGSALQTVPVSGASYSFAGVINGEYHVFAGQDESGDQLI
                     GLPGRRWGAFGGTASPSSLDVTSAATYHASFSIGIPSEAEPNGTVANADVLPVGGYFQ
                     GEMDPADVDLYRVLIPQAGQYTFETSPVDGACGFALEEDTLLGLYDANGVLMTSNDDI
                     DLDAFNFCSRVTATLAPGAYHVGVQGLFGGRYRVQARSGS"
     gene            2172..2654
                     /locus_tag="VGQ24_13515"
     CDS             2172..2654
                     /locus_tag="VGQ24_13515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455911.1"
                     /translation="MAQPYGKLLLRRGLLVGSLGFATVNLGFGPLGCARKQAPVSERP
                     DTLTSDTLTSDTLTSDTLRESIARQVGTAACSSPAVCRTLPLGSKPCGGPRQYLVYSL
                     AVTDSARLAADAARYGEAEAQRNREKGLVSDCSMLIAPQVSCVSGRCVAVRSEGRQPQ
                     "
BASE COUNT          462 a          917 c          900 g          531 t
ORIGIN      
        1 ggcacgatca cgctgaccag tagcctgatg gcgcgggcca agtcgccctc cgcggccgcg
       61 tcgtctgcca taccgctact ccccaggacg aagctctcgc gctccctgca cggcattctt
      121 catgagcagc ccgacttgtc cactcgccgc cagcaacggc ctcaccgggc accggagtac
      181 accgccaatg acctgatcgt caccttccgc gcccgctcga tcggtgctcc tcctctgggg
      241 tcgggggccc tggcgttgcg atcgaccgcc gctgtcgccg gggccggcat ccgtgcccga
      301 ctggtaccgc atatagccgc ggaacgtttg atggtgaggg gagtctctcc cgcgatcctc
      361 gcggctcgaa tccgagtgcc tgcgggagcg gacctgaagc gaatagcggc gcggttgctg
      421 tcggatcctg cggtcgccgg cgtggaccgc aacctcatcc tgcggctcga tggcgagtcg
      481 aggagatcca acgatccact ctacccgttt caggcctggc actacgggat gatcgatgct
      541 cctgaggcct ggagcatcac caccggatct acgagcgtac tggtggccgt ggtggacgat
      601 gggattcgat tcgatcaccc ggcgatgtca gcaaatctga catcggacgg ctacgatttc
      661 gtctcgaatc tttcgatcga tgtctgtggc ggcgggacca gcacgctctc gggcgatgga
      721 gatggctacg atcccgaccc gaccatcccg gcggcgtacg atttcgaccc cgacctggag
      781 tgcattgctg gactcctgga aacaggaaat cacggcctgc acgtagcggg caccatcggc
      841 gctgtgggca atgatggctt gggggtatca ggtctcaact ggacggtcag gattcggccg
      901 gtgcgggtgc tcggggtcga cggcgaggga actgcttacg atgttgccca gggcatcctg
      961 tacgcggccg gccttccagc cgacgatggg gcaggaggtg ttgtccaggc cgccacggga
     1021 gccagcatca tcaacttgag cctgggcggc ccgggcgact tcccggtgct ggccaacgca
     1081 gtgacagcag cttccaatgc aggtgcgctg atagttgcgg ccgccggaaa caccggcacc
     1141 tccgtgccgc agttcccggc cgcgtatcct gaggtgctct ccgtgtcggc ggtgggtccc
     1201 gatcggcaat ttgcctccta ctcgagcttc gggtccaccg tggacatcgc tgccccagga
     1261 ggagacttcg ctgatggaga cgtgagcttc ggcgtcattt caacggcctg ggacttcgtc
     1321 aacggacagc cggtctacgc ctccaacaac ggtacctcga tggcggtgcc ccatgtcgcg
     1381 ggcgtcgcgg ggttggtcct cgccgccagc ccgggtctga gcgctgctca gctcaggtcc
     1441 cgcctcctcg acttcgcggt cgatgcgggc gcggccggtc cggacaatcg ctatggtgcc
     1501 ggcattgtca atgcgcggaa cagcctcgcc caaaatcttg cacccactcg tcagctccga
     1561 gccaggctgt acgatgcctt gaccggcagc gcactccaga ccgtgccggt atccggcgcc
     1621 tcctactcct ttgcaggcgt gattaatgga gagtatcacg tctttgccgg tcaggatgag
     1681 agcggtgatc agctcattgg gttgccgggc cgtcgctggg gtgcctttgg cgggacggca
     1741 agcccctcct cgctcgacgt aacgagcgcc gcgacctatc acgcctcgtt ctcgataggc
     1801 attccatcgg aagccgaacc gaatggtact gtggctaacg cagacgttct tccggttggc
     1861 gggtactttc aaggtgagat ggatccggcc gatgtggatc tgtatcgagt gctcatcccc
     1921 caggctggtc agtacacctt cgaaacgtct ccggttgatg gcgcctgcgg cttcgcgctg
     1981 gaggaagaca ctctcctcgg actctacgac gccaatggag ttttgatgac ctcgaacgac
     2041 gacatcgatc tggacgcctt caacttctgc tctcgagtaa ccgcaacgct tgcgcccggc
     2101 gcctatcacg tgggcgtgca agggctcttc ggcgggagat accgcgtcca ggcccggtca
     2161 ggatcctgac catggcacag ccatacggga agttgcttct gcgacgcggc cttctggttg
     2221 gctcgctcgg gttcgccacg gtgaacctag gattcggtcc cctgggctgc gccaggaagc
     2281 aggctccggt cagcgaacgt ccagacaccc tgacatcaga caccctgacg tcggacacgc
     2341 tgacgtcaga caccctgcgg gaatccattg cgcgacaggt gggaaccgcc gcctgctcct
     2401 cgccggcagt ctgtcggact ctaccactgg gctcgaagcc ctgtggtggg ccccggcagt
     2461 acctggtcta ctcgctggct gtcaccgact cggcgcgcct ggccgcggac gcggcccgct
     2521 acggcgaggc cgaggcccag aggaaccggg aaaaaggcct ggtgtcagat tgtagtatgc
     2581 tgatcgcgcc gcaggtgagc tgtgtttccg gccggtgtgt agcagtacga tctgagggtc
     2641 ggcagccgca gtgaggggaa ctagtcgaac gcctcgttga tctcggcaaa cgacaccgcc
     2701 cgggcgagcc cggtgaagct tccctgctcg gcgatctccc tcgcggcctg gagaaacccg
     2761 gtccaggccg tccgggccag tgcgccgccc acgctgatcc tgcggactcc
//
LOCUS       DASYRV010000505         2717 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2599063, whole genome shotgun sequence.
ACCESSION   DASYRV010000505 DASYRV010000000
VERSION     DASYRV010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2717
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2599063"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1405)
                     /locus_tag="VGQ24_13520"
     CDS             complement(<1..1405)
                     /locus_tag="VGQ24_13520"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEV8455912.1"
                     /translation="MTASVRSPASPENVAALVAAVSGASVAVLGGLVVAGWLTVAVAL
                     IQVLPGMPPMQYNTALGFMICGAALLAATLDLRRPTALLGGLAAVMGLATLFENLFHS
                     NLGIDDLLVETYIFTGVSDPGRVAPNSALALSLGGLALLVLAWRPVSRSWHRWPALLG
                     AIVVALGTSALVGYAADIPSAYGWGDFNRMGLHTALGFTLLGGGIVGLAWNNAQRESG
                     ETPDWLPALSAIAVISVTLFMWLALNGGGRRESAVGTVTLLTGLLSALLLARSLRAGQ
                     IARRHARSLESANLTLHQEMDTRMRAEETMLQLAAIVESSDDAIFGTTLDGLIQNWNH
                     GAERLYGYSRHEVLGQHVSLVHAEQQKDADLLRRIAAGERVSRLETINLTKDGRRIDV
                     SMTISPILDRTGEIVGASTIARDITDERILDRMKSDFVATVSHELRTPLSAIKGFLEL
                     VVDGEAGPINETQREFLD"
     gene            complement(1402..>2717)
                     /locus_tag="VGQ24_13525"
     CDS             complement(1402..>2717)
                     /locus_tag="VGQ24_13525"
                     /inference="COORDINATES: protein motif:HMM:NF025017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEV8455913.1"
                     /translation="GFCRTLRTVQELQRPDRRRLLRSPLTPPVSVLAPAFNEEANVVD
                     NVRSLLMLDYPLFEVILVNDGSKDATLDRLIAAFGLKLSARSFEHTVPCKPIRGVYES
                     SLYPNLVVVDKVNGGKADALNSGLNLALYPLFCAIDADSILESDALLRLVRPFLEAPG
                     VTIAAGGVIRIANGCDIRAGRVRKVQLVRRTLPLIQIVEYLRAFLFGRMGWSSGNSLL
                     VISGAFGLFDKRTAVQVGGYATDTVGEDMELVVRMHRHLHDRKQRYRIGFVPDPICWT
                     EVPESLRVLRRQRTRWQRGLIDTLWRHRGMMGRPRYGMVGLVALPGFAVFEMLSPVIE
                     LSGYLLLPLLLLLGYLDVSYVAAFMVMSILYSILVSILAVLLEDVTFRRYTNPRDMVV
                     LVGAAVLEHLGYRQLTVWWRVRAFWEFSRGDLSWGAMERRGVGAA"
BASE COUNT          533 a          891 c          876 g          417 t
ORIGIN      
        1 tgtccagaaa ctcacgctga gtctcgttga tcggcccggc ctcaccatca accacgagct
       61 cgaggaaccc cttgatggcg gagagcggcg tgcggagctc gtgcgacacg gttgccacga
      121 agtcgctctt cattcgatcc agaatcctct cgtcggtgat gtcgcgggca atggtcgagg
      181 ctcccacgat ctcaccggtg cgatcgagaa tgggcgagat cgtcatcgag acatcgattc
      241 tccgcccgtc cttggtcagg ttgatcgttt ccagccggct gactcgctct cctgccgcga
      301 tgcgccggag tagatccgca tccttttgct gttccgcatg aaccagggag acgtgctggc
      361 ccagcacctc gtggcgactg tacccgtaca accgctccgc cccgtgattc caattctgaa
      421 tcagaccgtc gagggtggtc ccgaagatgg cgtcgtcgga agactccaca atcgcggcga
      481 gctggagcat cgtctcctcg gcccgcatac gggtgtccat ctcttggtgc aatgtcaggt
      541 tggcagactc gagcgaacgg gcgtggcgcc gggcgatctg ccccgcccgg agcgagcggg
      601 ccagcagcag cgcgctcagc aggcccgtca acagcgtgac ggtcccaacg gcggactctc
      661 gccttcctcc gccgttcagg gcaagccaca taaaaagtgt cacgctgatg acggcgatcg
      721 ccgaaagcgc cggaagccag tcgggcgtct caccggattc acgctgggcg ttgttccagg
      781 cgagaccgac gatgccgccg cccagcagag tgaacccaag ggcggtatgg agccccatgc
      841 gattgaagtc gccccatccg taggcgctgg ggatatcagc ggcatagccg accagagccg
      901 aagtgcccag cgcaaccacg atggcgccga ggagcgcagg ccagcgatgc caggagcggg
      961 agaccggccg ccaggccagc accagcagag ctaagccgcc caggctcaag gccagggcgc
     1021 tgttgggcgc cacccgtccc gggtcggaga cgccggtgaa gatataggtc tcgaccagga
     1081 ggtcgtcgat tccgaggttg ctatggaaca gattctcgaa caacgtcgcg agccccatca
     1141 ccgctgcaag cccgcccagc aatgcggtgg gacggcgaag atccagagtc gccgccagga
     1201 gcgcggctcc gcagatcatg aagccgagcg ctgtgttgta ctgcatcggc ggcatgccgg
     1261 gaagaacctg aatcagcgcg accgccaccg tgagccagcc ggcgaccacc aggccgccca
     1321 ggaccgcgac gctcgctccc gacacggcgg caaccagggc cgcaacgttc tcgggacttg
     1381 ccgggctccg gaccgatgcc gtcatgcggc gcctacgccc cgccgctcca tggcacccca
     1441 ggagaggtct ccccgcgaga actcccagaa tgcgcggacc cgccaccata ccgtgagctg
     1501 ccgatagccg aggtgctcca gcactgctgc accgacgagg actaccatgt cgcgtgggtt
     1561 ggtgtagcgg cggaaggtga cgtcttcgag taggacggcc aggatcgata ccagaatgga
     1621 gtagaggatc gacatcacca tgaacgcagc cacgtatgag acatcgaggt agcccagcaa
     1681 caggagcagg ggaagcagga ggtaacccga gagctcgatg actgggctca gcatctcgaa
     1741 gacggcgaac ccgggcaggg cgaccagtcc gaccattccg taacgcggtc gtcccatcat
     1801 accccggtgg cgccagaggg tgtcgatcag acctcgctgc catcgtgtcc gctggcgccg
     1861 cagcacgcga agactctccg gaacctcggt ccagcagatc ggatccggga cgaagccgat
     1921 ccggtaccgc tgcttccggt cgtgaaggtg gcggtgcata cgcacgacca gctccatgtc
     1981 ctcccccacc gtatcggtgg cgtagccgcc gacctgcacg gccgtacgct tgtcgaagag
     2041 cccgaaggcg ccggatatga ccagcaggct gttgccgctg ctccatccca tgcgcccgaa
     2101 caggaaggcg cggagatact cgacgatctg gatcaagggc agcgtccgcc gcaccagctg
     2161 gaccttgcgc acccgacccg cccggatatc gcatccattg gcgatccgaa tcacgccgcc
     2221 ggccgctatc gttactccgg gagcctcgag gaatggccgt acgagccgaa ggagcgcgtc
     2281 ggactcgagt atggagtcgg cgtcgatggc acagaacagg ggatagaggg cgaggttgag
     2341 tccggaattg agggcgtccg ccttgccccc gttcaccttg tccaccacca ccaggttggg
     2401 atacaggctc gattcgtaca cgccgcggat cggcttgcaa ggcaccgtgt gctcgaagct
     2461 tcgagcgctg agcttgagcc cgaaggccgc gatgagcctg tcgagcgtgg catccttcga
     2521 cccgtcgttc accagaatca cttcaaagag cggatagtcg agcatgagca gcgagcgcac
     2581 gttgtcgacc acgttcgcct cctcgttgaa cgcaggcgcg agaaccgaga ccggcggggt
     2641 cagcggagag cgcaggagcc ggcgccggtc ggggcgctga agctcctgca ccgtgcgcag
     2701 cgtccggcag aagcctg
//
LOCUS       DASYRV010000506         4794 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_620449, whole genome shotgun sequence.
ACCESSION   DASYRV010000506 DASYRV010000000
VERSION     DASYRV010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4794
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_620449"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..999)
                     /locus_tag="VGQ24_13530"
     CDS             complement(<1..999)
                     /locus_tag="VGQ24_13530"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase
                     family protein"
                     /protein_id="HEV8455914.1"
                     /translation="MPTDSLQTDVALLEKCRLYTRADEVKAQGLYPYFRPISESEDTI
                     VVIEGKRRIMLGSNNYLGLTHHPKVLEAASRALSLYGSGCTGSRFLNGTLDLHLQLEA
                     ALAEFLGKEDCIVFSTGYNANLGLISGLVGRRDVVFLDKLDHASIVDGAKLSDGETVR
                     FNHGDLAGLERKLERHPGIGKMVIVDGVYSMEGDIADIPGLLKICRRQGAALAVDDAH
                     SIGVLGPKGDGTAAHYGLVDEVDIIAGTFSKSLASIGGFVAASRSIINYLRHHSRPLI
                     FTASLPPSNTAGVLAALTVLQEDSERREQLWANTRRLQAGFRALGFDTGPSETPIVP"
     gene            1189..3507
                     /locus_tag="VGQ24_13535"
     CDS             1189..3507
                     /locus_tag="VGQ24_13535"
                     /inference="COORDINATES: protein motif:HMM:TIGR03296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M6 family metalloprotease domain-containing
                     protein"
                     /protein_id="HEV8455915.1"
                     /translation="MRRFVPLFAFFLAALLPRGPVLAQGGGSVPVLFEPFDWGPNAAW
                     RRRAAAVRSVRADLLRRGDLRALNAVQGGVGRLPMLLGVLPTTAVTGAFHVPVIAIAY
                     KDVSVPRPVEQYQCVLFNRTPGACATDPGDRPYSVTTFYEQLSHNRISLDGVVLAPVR
                     QDSNAVYYTDGCNGIAVVNSCPSRPRNRFGMMLVTTLDSISARPGGDTLWAQFDNDGP
                     DGTPNSGDDDGVVDFVTFLQPEVGGECQSNTPKPTGIWSHRYVIRGWTSGLVQPNLDP
                     SGRFVTRTPWNGHAGQFLKIDDYTIQSAVGGSTSCDGSTIMAIGTVAHETGHAFGLPD
                     LYDISQSTQGIGGWGLMGSGNYARPYSPSSYDAWSLHVLGWATLDTLGTSRVVTTGPR
                     LLTDTIFYARTANPDEYLLIENRQAVLSDTAQMNPALSAPCPSLGFCAKSPGLLLWLI
                     NQAKVQNSLFSNSVNVTVGGMQGVELIQADGLNELRAPGGRNRGDRGDAYPGTANNTR
                     FSLLATPSARNHTGSYIGFILENIQPLGGGLMGFRFLRREPSLFAGEQGAMIRVNGAA
                     WARYDEVVAAGEQLQLGVDDVQLLSGGRTRARFVSWSNGGPRDQTLISSAAKPDTLTA
                     SFVSEHRLILTTLGGGTVASSVAGNLAQGVFLSEGTAVTLTATAPNGTIFTGWRGDTV
                     ATDPALQLTMLKGYDVEARFIAQLVVPPADAVSDLLGTPRLSDPQRLYLDELGNRNGI
                     FDVGDLLALYRRQGQAVPPALLRGAQQGQRRP"
     gene            3504..3896
                     /locus_tag="VGQ24_13540"
     CDS             3504..3896
                     /locus_tag="VGQ24_13540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455916.1"
                     /translation="MSKPARLGLLTLGLAIAACGGESQNPTPSGDLLVNYFQSGPEAG
                     AVLLTITGGPVDNVTALGGQQVSFASPFTGTTKLVVAGTLSNGDILRLRVPDTSKFAD
                     YTVRIEQVADKNTFALIDPSSYTFTVHR"
     gene            4001..4459
                     /locus_tag="VGQ24_13545"
     CDS             4001..4459
                     /locus_tag="VGQ24_13545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEV8455917.1"
                     /translation="MLSLTVNGKPVSVDVAPDTPLLWVLRDALHLNGTKFGCGIGQCG
                     ACTVHLDGVAQASCQIPAGAAAGKTVVTIEGLSSDGNHPVQQAWIAEQVPQCGYCQSG
                     QIMRAAYLLSQKPKPSDADIDEVMSQNLCRCGTYQRIRRAIHRAAGEVTT"
     gene            4468..>4794
                     /locus_tag="VGQ24_13550"
     CDS             4468..>4794
                     /locus_tag="VGQ24_13550"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEV8455918.1"
                     /translation="MSRRDFLRASAVAGAGLTIAVYLPSCAPGPGKPVTTPFKPDAWI
                     RMSTDGSVTLVIDRSEMGQGVLTALPMLLAEELDVPWEKVRIEQAPAGREYINSDFGI
                     QGTGGSS"
BASE COUNT          808 a         1597 c         1536 g          853 t
ORIGIN      
        1 cggaacgatg ggcgtctcgg acggcccggt gtcgaagccc agcgcgcgga agcccgcctg
       61 cagtctgcgg gtattggccc agagctgctc gcgccgttcg ctgtcctcct gcaggaccgt
      121 cagcgccgcc agcacgccgg ccgtattcga gggcggcagc gaggcagtga agatcaaggg
      181 gcggctgtga tgccggagat aattgatgat gctgcgggag gcagcgacaa acccgccgat
      241 cgaggcgagg gatttcgaga aggttcccgc gatgatgtcc acctcgtcca ccagcccgta
      301 gtgcgcggcg gtgccgtcgc ccttggggcc cagcacccca atcgagtggg catcgtcgac
      361 cgccagcgca gcgccctgcc gccggcagat tttgagcagc cccgggatgt ccgcgatgtc
      421 gccttccatc gaatacacgc cgtcgacgat caccattttc ccgatgcccg ggtgccgctc
      481 gagcttgcgc tccaaaccgg ccagatcgcc gtggttgaag cgaacggttt ccccgtcgga
      541 caatttggcg ccgtccacga tggaggcatg atccagcttg tcgaggaaga cgacgtcccg
      601 ccggcccacc aacccggaaa tgagaccgag attggcgttg tagcccgtgg agaagacgat
      661 gcagtcttcc ttgccgagaa attcggccag cgcggcctcg agctgcaagt gaagatcgag
      721 ggtgccgttc aagaagcggc taccggtgca gcccgacccg tagagggaaa gggcgcggct
      781 ggccgcttcg aggactttgg ggtgatgggt caggccgagg tagttgttcg accccagcat
      841 gatccggcgc ttcccctcga tgacgacgat cgtgtcttcc gattccgaga tcggccggaa
      901 gtaaggatag agaccctgag ctttgacctc gtcggctcgg gtgtacagcc ggcacttctc
      961 cagcagagcg acgtcggttt gcagagaatc tgtcggcacg atacctcgtg tcagctgagg
     1021 tggatcaacg ctccatcccc atgcgggata acgggttaaa gtaaaccgct gagcgcgttt
     1081 ggacaagcgc gcccttctgg acggcaggac gggccaccga attgcatgac ggcttttcgc
     1141 cagaggcaaa tgccgtcacg tacgattagt tttttgggcg agtccatgat gcgtcgcttc
     1201 gttccgcttt tcgcgttctt cctggcagcc ttgcttcccc gtggccccgt gctggctcag
     1261 ggcggaggct ccgtgccggt gttgttcgag cccttcgatt gggggccgaa tgccgcctgg
     1321 cgccgccgcg cggccgccgt ccgcagcgtg cgagccgact tgctccgccg cggagatctg
     1381 cgtgccctga atgccgtgca ggggggcgtg ggaaggctgc ccatgctgct cggcgtcttg
     1441 ccgaccaccg cggtgaccgg cgccttccac gtgcccgtta tcgcgattgc gtacaaggac
     1501 gtgagcgttc cacgccccgt cgagcaatac cagtgcgtgc tcttcaaccg gactcccggc
     1561 gcctgcgcca ctgacccggg cgaccggccc tattcggtca cgacgttcta cgagcagctc
     1621 tcccacaatc ggatttcgct cgacggagtc gtcctcgcgc cggtccggca ggattccaac
     1681 gcggtgtatt acaccgatgg gtgcaacggc atcgcggtgg tgaactcctg tcccagccgg
     1741 ccgcgcaacc ggtttggcat gatgctggtc accacgctcg attccatctc cgcccggccg
     1801 gggggagata ccctctgggc ccagttcgac aacgacggcc ccgatggtac gcccaacagc
     1861 ggcgacgatg acggcgtggt cgacttcgtc acctttctcc agcccgaggt gggtggagaa
     1921 tgtcagtcca atactcccaa gcccacggga atctggagtc atcgctacgt tattcgcggc
     1981 tggacttcgg ggctggtgca acccaatctc gatccaagcg ggcgcttcgt gacccgcacg
     2041 ccgtggaacg gtcacgccgg gcaattcctc aagatcgacg actacacgat ccagtcggcg
     2101 gtgggcggct cgacctcgtg cgacggcagc acgatcatgg ccatcggcac cgtggcacac
     2161 gagaccggcc acgccttcgg gcttccggat ctgtacgaca tcagccagag cacccagggg
     2221 atcggtggct ggggcctcat gggttccgga aattacgccc gtccctacag tccctcatcc
     2281 tacgacgcgt ggtccctgca tgtgctcggc tgggccacgc tcgataccct gggtaccagc
     2341 cgggtggtga ccacggggcc gcggctgctt accgacacga ttttctacgc tcgcaccgcc
     2401 aatccggatg agtatctgct gatcgagaac cggcaggccg tgctgagcga cacggcgcag
     2461 atgaaccccg cgttgtctgc cccctgtccc tcgctcggct tttgcgccaa gtctcccggc
     2521 ctcttgctct ggctcatcaa ccaggccaag gtgcagaaca gcctgttctc taactcggtg
     2581 aatgtcaccg tcggcggcat gcagggcgtg gagctgatcc aggccgatgg actcaacgag
     2641 ctgagggcgc cgggtggacg caaccgcggc gaccgcggtg acgcgtaccc ggggacggcg
     2701 aataacacgc gcttctccct gctcgccacc ccgagcgcgc gcaaccatac cggcagctat
     2761 atcggcttca ttctcgagaa catccagccg ctcggcggcg gcttgatggg attccgcttc
     2821 ctccggcggg aaccgagcct gtttgcggga gagcaggggg ccatgatccg ggtgaacggc
     2881 gccgcctggg cccgctacga cgaagtagtg gccgcgggcg agcagctcca gctcggagtg
     2941 gacgacgtgc aactcctctc cggcgggagg acccgggctc gctttgtttc ctggagcaac
     3001 ggcggcccgc gcgatcagac gctcatcagc tcggccgcca aacctgatac cctcaccgcg
     3061 agcttcgtgt cggagcaccg cctgatcctc accacgctgg gtggcggcac ggtggcttcc
     3121 agcgtggccg gtaacctcgc gcaaggagtg ttcttgtccg aggggaccgc ggtcaccctg
     3181 acggccacgg cgcccaacgg gacgatcttt accggctggc gcggcgacac cgtcgcgacg
     3241 gatccggcct tgcagctcac tatgctgaag ggctacgacg tggaagccag gttcattgcg
     3301 caactggtcg taccgccggc cgacgcggtg agcgatctgc tgggaacgcc ccggttatcg
     3361 gatccccagc ggctctacct ggatgaattg ggcaaccgga acggcatttt cgatgtgggc
     3421 gatttgctcg cgctgtaccg caggcagggg caggcggtgc cccccgcgct gctccggggc
     3481 gcccagcaag gacagcgacg gccatgagca agcccgcccg gctcggactg ctgaccctgg
     3541 ggctcgccat cgccgcctgc ggtggtgaga gtcagaaccc gacgccctcg ggcgacctgc
     3601 tggtcaacta tttccagtcg ggacctgagg cgggagccgt tctgctcacc atcaccgggg
     3661 ggccggtaga caacgtcacg gcgctcgggg ggcaacaggt gtccttcgcg tcgcccttca
     3721 cgggcaccac gaagctggtc gtcgcgggaa cgctctccaa tggggatatc ctgcggttgc
     3781 gagttcctga tacaagcaag tttgcggact atacggtgcg gatcgagcag gtcgccgaca
     3841 agaacacctt cgcgctgatc gatccgtcgt cctacacctt tacggtgcac cgatagacgg
     3901 gaagaccctt ccaacccggc ctcaggccct ccgatcctcc cgtcttcccg tcctcccgtc
     3961 ttcccgccag attcccccat cctcccccgg agtccagctc atgctctccc ttaccgtcaa
     4021 cggtaaaccc gtttccgtcg acgtcgcgcc ggacaccccc ctcctctggg tgctccgaga
     4081 cgccctgcat ctcaacggca ccaagttcgg gtgcgggatc ggtcagtgcg gcgcctgcac
     4141 ggtccatctc gatggcgtcg cccaggcgtc atgccagatc cccgctggag ccgccgctgg
     4201 aaagaccgtg gtcaccattg aaggtctctc aagcgacgga aaccatccgg tgcagcaggc
     4261 ctggatcgcc gagcaggttc cccagtgcgg ctattgccaa tcgggccaga tcatgcgcgc
     4321 cgcgtatctg ctcagccaga agcccaaacc cagcgatgcc gacatagatg aggtgatgtc
     4381 gcagaacctc tgccgctgcg gcacctatca gcggatccgg cgcgccattc atcgggccgc
     4441 gggggaggtg accacatgag cgcgagcgtg agtcggcgcg actttctgcg cgcgagcgct
     4501 gttgcgggag cgggcctcac catcgcggtg tacttgccgt cctgcgctcc tggccccggc
     4561 aagccggtca ccacgccctt taagcccgac gcctggatcc ggatgagcac cgacggatcg
     4621 gtgaccctgg tgatcgaccg ctccgagatg gggcagggcg tgctgaccgc gcttcccatg
     4681 ctgttggccg aggagctgga tgttccctgg gaaaaggtgc gcatcgagca ggcaccggcg
     4741 gggcgcgagt acatcaattc cgactttggc atccagggca ccggggggag ctcc
//
LOCUS       DASYRV010000507         8358 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1452818, whole genome shotgun sequence.
ACCESSION   DASYRV010000507 DASYRV010000000
VERSION     DASYRV010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8358
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1452818"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..1067
                     /gene="arsS"
                     /locus_tag="VGQ24_13555"
     CDS             27..1067
                     /gene="arsS"
                     /locus_tag="VGQ24_13555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_274671337.1"
                     /note="Some members of this family are selenoproteins;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenosugar biosynthesis radical SAM
                     (seleno)protein ArsS"
                     /protein_id="HEV8455919.1"
                     /translation="MAVLPTLQKQRHPLAGGAAQRRRLAEVPLPRSFESALGAAGLYP
                     IRPRGIDILQINIGKKCNQTCHHCHVDAGPDRTEMMPAAVIDACLAVLAANRIPTLDI
                     TGGAPELHPEFRRIVREATALGCQVIDRCNLTVTRLPNYRWVAPFLAESRVEVVASLP
                     YFQARQTDAQRGEGVFEDSIEALRELNELGYGRPGTGLLLNLVTNPVGAFLPPVQASA
                     ERDWKRELERRHGIVFNRLYTITNMPISRFLQHLDEKQQTEAYLERLVQAFNPVAAAG
                     VMCRNMISVGWDGTLYDCDFNQMLDLPVASVSRNILDFDAPALVAREIALGPHCFGCT
                     AGAGSSCGGALG"
     gene            1231..2136
                     /gene="ilvE"
                     /locus_tag="VGQ24_13560"
     CDS             1231..2136
                     /gene="ilvE"
                     /locus_tag="VGQ24_13560"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: protein motif:HMM:NF006185.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HEV8455920.1"
                     /translation="MTVSTKPTTTPPAHGTGTPTIWLDGKWCDRSSATVSVYDHGLLY
                     GDGVFEGIRAYGGKLFRLTEHLERLYDSAKAIWLSIPMPREEMAAITEEAVRRSGITE
                     AYIRHVITRGVGDLGLDPRKCPKPSVIIIVDTIKLWPEQVYEAGLNVVTAGTPIPQRE
                     SLSPRVKSLNYLAHILAKIEGIHAGADEVLMLDSAGTVAEGSGQNLFVVKGGRLRTPP
                     PYAGILKGVTRDVVIEIAAHAGYPVEESILNRYDVYTADEAFFTGTASEVVAIRQVDG
                     RVIGSGKAGPVTRDIRARFQALVRS"
     gene            2157..2828
                     /locus_tag="VGQ24_13565"
     CDS             2157..2828
                     /locus_tag="VGQ24_13565"
                     /inference="COORDINATES: protein motif:HMM:TIGR04283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04283 family arsenosugar biosynthesis
                     glycosyltransferase"
                     /protein_id="HEV8455921.1"
                     /translation="MPTLDEASRLPRLLQDLAPLPIPHEIIVADGGSTDATTELAAAG
                     GCRVLRTEPGRGHQLRVGVAAALGEWLLVLHADARLTPEALAEAIEALGNHEVQCACW
                     PLAIEGKGAWYRVIELGAALRWRLFGLAYGDQGLLVRRSLYEAAGGYPELEIMEDVVL
                     IRRLGRLARIVRFRTPLLTDARRWAREGPVRASIRNVALLSLYLAGAAPDRLARWYAP
                     EPRDQ"
     gene            2828..3418
                     /locus_tag="VGQ24_13570"
     CDS             2828..3418
                     /locus_tag="VGQ24_13570"
                     /inference="COORDINATES: protein motif:HMM:TIGR04282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04282 family arsenosugar biosynthesis
                     glycosyltransferase"
                     /protein_id="HEV8455922.1"
                     /translation="MPPLAVFLKAPRLGTVKTRLATEIGERHALRLYRVLAARTLTAV
                     RAAGLDAIIWYSPPDARTEMEFWLGHAWELRPQVTGDLGARLAAAAHAVPRGHPWVAI
                     GADCPALTAPILREACAQLERTGLVIGPAYDGGYYLIGGRTPLPDIFTGMPWGTDRVL
                     AETRARLTRISAAWHELPILRDVDTADDARAEGLLT"
     gene            3475..3714
                     /locus_tag="VGQ24_13575"
     CDS             3475..3714
                     /locus_tag="VGQ24_13575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455923.1"
                     /translation="MAWRILDHADQRWNVSIAAERRPNSPHWNLVFSFRGTEPGQRSV
                     WADYPLSSSSKSALFIQADRISNDDLIALLVSRLG"
     gene            3746..4165
                     /locus_tag="VGQ24_13580"
     CDS             3746..4165
                     /locus_tag="VGQ24_13580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455924.1"
                     /translation="MSTTTPLPERLRFAEFTLDRLPNGRCRARVGLTWRDSEQFTGEG
                     EGLASQAGELRCAAQACVVALGQAMQGGMSFELLGVKAVRAFDATVVIVSLAVHGEGN
                     GQRVVGSYLTENDTARGAALAVLNATNRILGNRLFMR"
     gene            4282..6018
                     /locus_tag="VGQ24_13585"
     CDS             4282..6018
                     /locus_tag="VGQ24_13585"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEV8455925.1"
                     /translation="MLRISSALALLFLAGCGGHHGATPASHSPAASPLTNVDRTSRRT
                     TDSLADQIGLTSTPVIDSALVAADFAAEGRLAADSAADEAVLEELATAHPEGDEADSS
                     GDVAAEGGANALADGVTWDIDVETYNSHDRVQYYLSFFQSRGRERMSIWLTRMPRYEA
                     MVRERLQRESLPGDLVYLALIESGFSNTATSRAKAVGMWQFMKATARMYGLRVDSWVD
                     ERRDPFRATDAAARHLRDLNRRFGSLYLAAAAYNAGSGKVSRGLIRLPDEDSDSVNSD
                     ATFFRLYDTKWLRRETKDYVPKLIAAALIAKQPRRYGFNPGRAEPAEYDSIVVPDMTG
                     LDVLAGLADTTVTAIRELNPQYLRLTTPPGTRSVVRLPPGRGPATVAQYAELPPRRRV
                     TFIEHFVARGETLSGIALRYRVSQAMLAAANPRVNSRRLRINQRIVVPTGGALSTSVA
                     RRMADPVVAAGTSTGAFHRVRRGETLSEIADEYGVTQRELRLWNVLDSRGRIRAGQRL
                     RVVSPDAPRRVIPRIQPVERSGERTHLVRRGETLKSLAKRYGVSIQALREANGLGERE
                     PLRAGIALKIPG"
     gene            complement(6015..6710)
                     /locus_tag="VGQ24_13590"
     CDS             complement(6015..6710)
                     /locus_tag="VGQ24_13590"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEV8455926.1"
                     /translation="MARHIDYGEPKPWTAERIFLRGGALLLAAVSIGALGAWNKRVRA
                     TDHADIPDVSIVARQMGSLSEQLEAAKGETVVIKLQLERATAILENSTRYQIPADLSG
                     AIYDIALSEGIDPSLGYQLVKIESQFNRKAQSPMQAFGYTQLQLATAKFYQPGITQKD
                     LYDRDTNLRLGFRFLNELLARFNYDVHLALLAYNRGPARVDQILAQGGNPANGYSDAV
                     LKGYRPIGAAGVR"
     gene            complement(6748..7227)
                     /gene="moaC"
                     /locus_tag="VGQ24_13595"
     CDS             complement(6748..7227)
                     /gene="moaC"
                     /locus_tag="VGQ24_13595"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001612668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HEV8455927.1"
                     /translation="MKLTHLDEQGRARMVDVGDKPVSERTASAEGAVRMSREAFDLVA
                     AQGLAKGDVLGVAEVAGTMGAKRTGELVPLCHPLSLDLVQVEARLEPELPGVRITALA
                     KATGRTGVEMEALTAVAVACLTVYDMVKAVDRGMVIEDVRLVSKSGGTRGDWRRSES"
     gene            complement(7224..>8358)
                     /locus_tag="VGQ24_13600"
     CDS             complement(7224..>8358)
                     /locus_tag="VGQ24_13600"
                     /inference="COORDINATES: protein motif:HMM:NF024575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase III subunit"
                     /protein_id="HEV8455928.1"
                     /translation="SNYPGLDGLLTFCSMLVHSLVGHHETRRRLAQAVQSKRLPQVLV
                     LAGPWGVGKQRLALWLAQLVLCEAAGEEPCGSCRACRLVGGLAHPDLHWFVPIARPKA
                     SETDKQVEEASQAIAEVMEERRARPLYAQSDGMASHGIASVRLLQRRGILTSVEGGRR
                     VFIIGEADRLVSQESSPEAANALLKLLEEPPPGSLFVLTTVDAQRLLPTIRSRAVLLR
                     VGGVADADVRGFLAAHLRPAPSAAELDQRVAAAGGSIGRALAVGEESSKAQQAAERLL
                     EAVMAGPGPSFEQALKQAPWSARGDFTAMLDALAETLSEATRETLGQTPRRPVPRALR
                     RYGHPDRLLKAMEHVEDAREAAWGNVNPQILLAILGEELAEIL"
BASE COUNT         1361 a         2832 c         2733 g         1432 t
ORIGIN      
        1 accatctcca acgcctgggc atgtgagtgg cagtcctgcc cacgcttcag aaacagcgcc
       61 atccgctcgc cggtggggct gcgcagcgcc ggcggctggc ggaggtgccg ctgccccgga
      121 gcttcgaatc ggcattgggg gccgccgggc tttatccgat ccggcccaga ggcatcgaca
      181 tcctgcagat caacatcggg aagaagtgca atcagacctg ccaccactgt cacgtggatg
      241 ccggccccga tcgaaccgaa atgatgccgg ccgccgtgat cgacgcgtgc ctggccgtcc
      301 tggcagcgaa ccgcattccg acgctcgaca tcaccggagg cgcgccggag ctgcatccgg
      361 agttccgccg tatcgtgcgc gaggcgacgg cgctcggctg tcaggtgatc gaccgctgca
      421 atctgacggt gactcggctg ccgaattacc gctgggtcgc gccctttctg gccgaatccc
      481 gggtggaggt ggtggcgtca ttgccctatt tccaggcgag acagaccgat gcccagcggg
      541 gcgagggagt gttcgaggac tcgatcgagg cactccgcga gctgaatgag ctcggctacg
      601 gccgcccggg caccggactc ttgctgaatc tcgtcaccaa cccggtcggt gcattcctgc
      661 cgccggttca ggcctcggcc gagcgtgact ggaagcggga gctcgagcgg cggcacggca
      721 tcgtgttcaa ccggctgtat accatcacca acatgccgat cagccggttt ctccagcatc
      781 tggacgagaa gcagcagacc gaggcgtacc tggaaaggct ggtccaggcc ttcaaccccg
      841 tcgccgcggc gggagtgatg tgccgcaaca tgatttccgt aggctgggac gggacgctct
      901 acgactgcga cttcaatcag atgctcgatc tcccggttgc ttccgtgtcg cgcaatattc
      961 tcgacttcga cgcgcccgcg ctcgtggcaa gggagattgc gctgggaccg cactgcttcg
     1021 ggtgcacggc gggggctgga tcgtcgtgtg gtggagccct tggatagcgt tgtcattctg
     1081 agcgaagcga agaatctctc cggtggccca cctagagatc ccttcggccg gctcagggca
     1141 ggctcttcgc tgtactcagg atgacatgcg ccaacattca ctagccaata gccaatagcc
     1201 aatagccaat agccttctta cattccgacc atgaccgtgt ccacaaagcc cacgaccacg
     1261 ccgccggccc acgggaccgg aacgcccacc atctggcttg acggcaaatg gtgcgaccgg
     1321 agcagcgcca cggtgtcggt atacgatcac ggcctgctct acggtgacgg cgtgttcgag
     1381 ggcattcgcg cgtacggcgg caagctcttc cggctgacag agcacctcga gcggctctac
     1441 gattccgcca aggccatctg gctcagcatc ccgatgccgc gagaggaaat ggcggcgatc
     1501 acggaggaag cggttcgccg ctcgggcatc acggaggcct acattcgcca tgtgatcacc
     1561 cgcggggtgg gcgacctcgg gctggacccg cgcaaatgtc ccaagccctc ggtcatcatc
     1621 atcgtggaca ccatcaagct ctggccggag caggtgtacg aagcgggact caatgtggtc
     1681 accgctggca cgccgatccc ccagcgcgag tcgctctcgc cccgagtcaa gtcgctcaat
     1741 tatctggccc acatcctcgc caagatcgag gggatccacg ccggcgccga cgaagtgctg
     1801 atgctggaca gcgccggaac cgtggccgag ggctcggggc agaacctctt cgtggtgaag
     1861 ggcggccggt tgcgaactcc gcctccgtat gcgggtatcc tcaagggcgt cacccgggac
     1921 gtagtcatcg agatcgcggc ccatgcggga tacccggtgg aagaatccat tctcaatcga
     1981 tacgacgtct acacggccga tgaggctttc ttcaccggta ccgcgagcga ggtcgtcgcg
     2041 atccggcagg tggatgggcg ggtgatcggt tcgggcaagg ccggtccggt cactcgggac
     2101 atccgcgcgc gcttccaggc tctcgtgcgg agctgattac gctcctttcg gtcgtcattc
     2161 cgacccttga cgaggcgtcg cgccttcccc ggctcctgca agacctcgct cctcttccca
     2221 ttcctcacga aatcatcgtc gccgacggcg gctccaccga cgctaccacg gagctggctg
     2281 ccgctggggg ctgccgcgtg ctccggaccg agccagggcg ggggcatcag ctacgggtcg
     2341 gcgtggctgc ggcactcggc gagtggctgc tggtgctgca cgccgacgcg cggctgaccc
     2401 ccgaagcact ggccgaggca atcgaggcgc tgggaaatca cgaggtgcag tgtgcctgct
     2461 ggcccctggc gatcgagggc aagggtgcct ggtatcgcgt catcgagctc ggcgccgcgc
     2521 tgcgctggcg gctgttcggc ctggcctatg gggaccaggg gttgctggtg cgacgctcac
     2581 tgtatgaagc ggcaggaggg tatcccgagc tggagatcat ggaggatgtg gtgctgattc
     2641 gccgcctcgg tcgcctggct cgcatcgttc ggtttcgcac cccactcctg accgacgcca
     2701 ggcggtgggc tcgggaggga ccggtacgag cgtcgatcag gaatgtcgcc ttgctctcgc
     2761 tctacctcgc gggtgccgcg ccggaccggc tggcgcgctg gtacgcgccc gagccgcgcg
     2821 accagtgatg ccaccgctcg cggtctttct caaggcaccc cgactgggca cggtcaagac
     2881 ccggctcgca accgagattg gcgaacgcca tgcgctccgg ctctaccgcg tgctggccgc
     2941 acgtaccctc accgccgtcc gcgcggctgg tctcgacgcg atcatctggt actcgccgcc
     3001 tgacgcacgc accgagatgg agttctggct gggacatgcc tgggagttgc gtccgcaagt
     3061 gaccggcgat ctcggcgccc ggctcgccgc cgctgcgcac gcggtgccgc ggggtcatcc
     3121 atgggtcgct atcggggcgg actgtccggc cctcaccgct ccaatcctgc gcgaggcctg
     3181 tgcccagctc gagcgcaccg gcctcgtgat cggaccggcg tacgacggag gttattacct
     3241 catcggcggg cgtacgccgc tgcccgacat tttcaccggg atgccgtggg gcaccgatcg
     3301 cgtcctggcg gagactcgcg cgaggctcac tcgcatcagc gccgcgtggc atgagctgcc
     3361 gatcctgcgc gacgtcgata cggcggatga cgcgcgcgcc gaaggactct tgacctgatt
     3421 ctcgggcgcc cggcatattg ccgagccctc attccgcgaa gctggagccc aacgatggca
     3481 tggcgaatcc tcgatcacgc cgaccagcgc tggaacgtgt cgatcgcagc agaacgacgg
     3541 cccaactcac cgcactggaa cctggtcttc tccttccggg gcaccgaacc cggccagcgc
     3601 tcggtatggg cagactaccc tttgtcctct tcatcgaaat ccgcactctt cattcaggca
     3661 gaccgcattt ccaacgacga tctgattgcg cttctcgtct cgcggctggg ctaggtggca
     3721 tgggctttgc ctcccaggga ccgccatgtc aacgacgact ccactccccg aacggctgcg
     3781 attcgcggag ttcacactgg accggttgcc caacgggcgg tgtcgcgctc gggtgggttt
     3841 gacctggcgg gattcggagc agtttaccgg cgagggtgaa gggctggcgt cccaggcagg
     3901 tgagctgcgc tgtgccgctc aggcctgcgt cgtggctctg gggcaagcga tgcagggggg
     3961 gatgagcttc gagctgctcg gcgtcaaggc agtgcgcgcc ttcgatgcca ccgtggtaat
     4021 cgtatcgctg gccgtgcacg gggaaggcaa tggacaacga gtggtggggt cgtacctgac
     4081 cgagaacgac acggcgcgcg gcgctgccct ggcggttctc aatgcgacga accggatcct
     4141 cggcaatcgc ctgttcatgc gataaatccc gcttagagat ccgtcccctc ccccttcagt
     4201 tcgcctctgg ttcctgcggt ttgcaggtgg ggcggtagtc agcctgcgac ctggaccgaa
     4261 actttaccga aggtaagtcc aatgcttcgg atctcgtctg cgctagcgct cctgttcctc
     4321 gccggatgcg gcggtcacca cggggctacc ccggcctctc actcgccggc ggcatcgccg
     4381 ctgacgaacg tcgatcggac ttcccgccgc acgacagact cccttgcgga tcagatcggt
     4441 ctgacttcca cgccggtcat cgactcggcc cttgtcgccg ctgatttcgc ggcggagggg
     4501 cgtctcgcgg ccgactcggc agcggacgag gccgtgctcg aagagctggc gacggcgcat
     4561 ccggaaggcg acgaggcaga cagtagtggg gacgtggccg ccgaaggcgg cgccaacgcc
     4621 ctcgcggatg gggtgacctg ggacatcgac gtcgagacct ataacagcca cgaccgggtg
     4681 cagtactacc tgtccttctt tcagagccgc ggtcgcgagc gaatgagcat ctggctcacc
     4741 cgaatgccgc gatacgaggc catggtccgc gagcgcctcc agcgggagag tctcccgggc
     4801 gatctggtgt atctcgcgct gatcgagagc gggttctcca acaccgccac cagccgggcg
     4861 aaggcggtcg ggatgtggca gttcatgaag gccaccgccc ggatgtacgg cctgcgggtg
     4921 gactcctggg tggacgagcg acgggatccg tttcgagcga cggacgccgc ggcgcgccac
     4981 ctgcgcgatc tcaaccgccg cttcggctcc ctctaccttg ccgccgccgc gtataacgcc
     5041 ggctcgggca aggtgtcgcg cggactgatc cggcttcccg acgaagacag cgattcagtc
     5101 aactccgacg ccaccttctt ccggctgtac gacaccaagt ggctccgtcg cgagaccaag
     5161 gactacgtcc ccaagctgat cgcggccgcg ctgatcgcga agcagccgcg ccggtacggc
     5221 ttcaatcccg gtcgagccga gccggcggag tacgactcca tcgtggtgcc cgatatgacc
     5281 ggtctcgatg tcctcgcggg tctggccgat accaccgtga ctgccatccg cgagctgaat
     5341 ccgcagtacc tgaggctcac gacgccaccg ggcacgcggt cggtcgtgcg gcttccgccg
     5401 ggacgcgggc cggccaccgt cgcacaatat gccgagctgc cgccccgccg ccgggtgacc
     5461 ttcatcgagc attttgtcgc gcggggagag acgctgagcg ggatcgcgct gcgctaccgg
     5521 gtgagccagg cgatgctcgc cgcggccaac ccgagagtga acagcagacg gttgcgtatc
     5581 aaccagagga tcgtggtgcc gaccggtggc gcgctctcca cctcggtcgc acggcgcatg
     5641 gcggatccgg tggtggctgc cggcaccagc acgggcgcgt ttcaccgggt gaggcggggc
     5701 gagacgctct ccgagatcgc cgacgagtac ggtgtcaccc aacgcgagct gcggctctgg
     5761 aacgtgctgg acagccgtgg ccggatccgg gccggccagc ggctcagagt cgtgtcgccc
     5821 gacgcaccac gcagagtgat tcccaggatt caaccggtag agcgctccgg cgagcggact
     5881 cacctcgtgc ggcgggggga gacgctgaag agcctggcga aacgctacgg cgtttcgatc
     5941 caggctctcc gagaagcaaa tggactgggc gagcgcgagc ccctgagggc cggcatcgcg
     6001 ctcaagattc ccggctagcg caccccggcc gccccgatcg gacggtagcc cttgagcacc
     6061 gcgtcggaat agccgttcgc gggattgccg ccctgggcca ggatctggtc cacccgggcc
     6121 gggccgcggt tgtaggcgag cagggccagg tgtacgtcgt agttgaagcg ggccaggagc
     6181 tcattcagaa aacgaaatcc caggcgcagg ttcgtgtccc ggtcgtagag gtccttctgg
     6241 gtgatgccgg gctgatagaa cttcgccgtt gcgagctgga gctgggtata cccgaacgcc
     6301 tgcatcgggc tttgggcctt ccgattgaac tggctctcga ttttcaccag ctggtagccc
     6361 agtgaaggat cgatcccctc gctcaacgcg atatcgtaga tcgcccctga caggtcggcg
     6421 gggatctggt aacgggtgga gttctccaga atggcggtgg cccgctccag ctggagcttg
     6481 atgaccaccg tttcgccctt ggcggcttcg agctgctcgc tgagactgcc catctggcga
     6541 gccacgatgc tgacgtccgg tatgtcggcg tgatcggtgg cgcgcacgcg cttgttccac
     6601 gcgccgagcg caccgatgga cacggcggcg agcagcaacg caccaccccg gaggaagatt
     6661 cgctccgcgg tccacggctt cggttcaccg taatcgatgt gtctcgccac gcgccaaccc
     6721 ctttctattg tgagaaggcc gtccgcccta tgactcggac cggcgccaat ctcctcgggt
     6781 gccgccgctc ttgctgacca gccgaacgtc ttcgatgacc atcccgcgat ccactgcctt
     6841 gaccatgtcg tataccgtga ggcaggcgac cgcgaccgcg gtgagcgcct ccatctccac
     6901 gccggtacgc ccggtggcct tggccagcgc ggtgatgcgc acgccgggta gctcgggctc
     6961 gagccgggcc tccacctgga ccaggtccag actgaggggg tgacaaagcg gaaccagctc
     7021 gccggtccgc ttggctccca tggtgcccgc cacttcggcc accccgagca catccccctt
     7081 ggcgagcccc tgcgcggcca cgagatcaaa cgcctctcgc gacatccgca ccgcaccttc
     7141 ggcagaggcc gtccgctccg acaccggctt gtcgcccacg tccaccatgc gggcccggcc
     7201 ctgctcgtcc aggtgggtca acttcacagg atttccgcca gttcctcgcc caatatggcc
     7261 aggaggatct ggggattcac gtttccccac gccgcctccc tcgcatcctc tacgtgctcc
     7321 atcgccttca gcaaccggtc ggggtggccg tagcgccgga gtgctcgagg cacaggccgg
     7381 cgcggcgtct gtcccagtgt ttctcgggtg gcctcgctca gcgtctccgc gagggcatcg
     7441 agcatggcgg tgaagtctcc ccgggcggac cacggtgcct gcttcaaggc ttgctcgaaa
     7501 ctgggaccgg gtcccgccat cacggcctcc agcaggcgct cggctgcctg ctgggccttg
     7561 ctgctctcct ctccaaccgc cagggctcgg ccgatcgacc ctcctgccgc cgcgacccgc
     7621 tggtccagct cggctgccga tggggcaggc cgcaggtggg ccgcgaggaa cccgcgcaca
     7681 tccgcgtccg ctacgccgcc caccctcagg agaacggccc gggagcgaat cgtgggaagc
     7741 aaccgctgcg cgtcgacggt cgtcagcacg aacaggcttc ccggcggcgg ctcctccaac
     7801 agcttgagca acgcgttggc cgcctccgga ctcgactcct gagacaccag gcggtccgcc
     7861 tcgccgatga tgaagacccg gcgacctcct tcgaccgagg ttagaatccc ccggcgctgc
     7921 agcaggcgaa cactggcgat cccatggctg gccatcccgt cgctctgggc atagagaggc
     7981 cgggcccgcc gctcctccat gacttccgcg attgcctgcg atgcttcctc gacctgcttg
     8041 tccgtctcgg aggcctttgg cctcgcaatc gggacgaacc agtgcaggtc cggatgggcc
     8101 aatccgccga ccagtcgaca ggcgcggcag ctcccgcagg gctcctcccc cgccgcttcg
     8161 cacagaacca gctgggccag ccagagagcc aaccgctgct tgcctacacc ccacgggcca
     8221 gccaggacca ggacttgggg caggcgcttg ctctggaccg cctgggccag acggcggcgg
     8281 gtctcatggt gcccgactag agagtgcaca agcattgaac agaaggtaag caggccatcg
     8341 agacccgggt agttggaa
//
LOCUS       DASYRV010000508         1524 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_4146631, whole genome shotgun sequence.
ACCESSION   DASYRV010000508 DASYRV010000000
VERSION     DASYRV010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4146631"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..564)
                     /locus_tag="VGQ24_13605"
     CDS             complement(<1..564)
                     /locus_tag="VGQ24_13605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     GatCAB subunit B"
                     /protein_id="HEV8455929.1"
                     /translation="MTWQIVIGLEVHVQLETRSKMFCGCANEFGAPPNTNVCPVCLGL
                     PGALPVANAQAVKLGTQAALALGCTIQERSVFARKNYFYPDLPKGYQISQFDQPLATG
                     GTVEVDSPERGRIAVSITRLHLEEDAGKSLHDRIPGQTAVDLNRAGAPLAEIVSGPDI
                     RSPAEARAYLLALKQILMYTGISECSME"
     gene            complement(561..>1524)
                     /locus_tag="VGQ24_13610"
     CDS             complement(561..>1524)
                     /locus_tag="VGQ24_13610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEV8455930.1"
                     /translation="PVALGSETGGSVRQPASFCGVVGVKPSYGRVSRYGLVAFGSSLD
                     CISVFGRTVDDATRVLSVISGHDPLEATSVDQPPMMPEPELRSLRGIRIGLPREYLPS
                     DLHSGIRAAMNRSIAVLKELGAEIREVSLPHSKFAVPTYYILAPAEAAANLARFDGVR
                     YGPRHVEPPDGDVRALYRATRGKGFGPEVRRRILVGTYVLSAGYYEAYYGKAQQMRAL
                     IADDFTKAFAPGGVHFLFTPTTPTPAFVAGEKSEDPVAMYLADVFVCAVSLAGLPAMS
                     VPIGRDQGLPIGGQIIAPYFQEPRMLALAGALERAISATAEVRS"
BASE COUNT          275 a          505 c          489 g          255 t
ORIGIN      
        1 ctccatgctg cactcactga ttccggtgta catgagtatc tgcttcagcg cgagcagata
       61 cgcgcgggcc tcggccgggc tccggatgtc ggggccactc acgatctcgg ccagcggcgc
      121 accggcccgg ttcaggtcca ccgcggtctg acccgggatc cgatcgtgga gtgacttgcc
      181 ggcatcctct tccagatgga ggcgggtaat cgaaaccgcg atccgtcccc gttccggtga
      241 atccacttcc accgttccgc cggtggcgag cggctggtcg aattgggaga tctggtaacc
      301 cttgggcaaa tcgggataga agtagttctt ccgagcgaag acgctgcgct cctggatcgt
      361 gcacccgagc gccagtgccg cctgggtgcc gagcttgacc gcctgcgcgt tagcgaccgg
      421 taaggcgccg ggcaggccca ggcatacggg acagacgttg gtattgggcg gtgccccgaa
      481 ctcgttggcg cagccgcaga acatcttgct ccgggtctcc agctgcacgt gcacttcgag
      541 cccgatcacg atctgccagg tcatgaccgc acctccgccg tagcggagat cgcgcgctcc
      601 agcgccccgg caagcgccag catccgaggc tcctggaaat acggtgcgat aatctggccg
      661 ccaatgggga ggccctggtc acgcccaatc gggacgctca tggccggcag tcccgcaaga
      721 ctcaccgcgc acacgaagac gtcggccagg tacatcgcca ccgggtcttc gctcttttct
      781 ccagcaacaa acgccggcgt cggcgtggtc ggagtaaaca ggaagtgcac ccctccgggg
      841 gcgaaggcct tggtgaaatc gtcggcgatc agcgcccgca tctgctgggc tttcccataa
      901 tacgcttcgt aatagccggc cgagagcacg taagtgccga ccaggattcg gcggcggacc
      961 tcgggcccga agcccttgcc ccgggtggcc cggtacaggg cgcgcacgtc gccatcgggc
     1021 ggctcgacat gccggggtcc atagcgcacc ccatcgaagc gcgcgaggtt ggccgcagct
     1081 tcagccggcg ccaggatgta ataggtcggc acggcgaatt tggaatgcgg aagcgatacc
     1141 tcgcgaatct cggcgcccag ctctttcagg acggcgatcg agcgattcat cgccgcccgg
     1201 atgccggaat gcaggtcgga tgggagatat tcccggggca agccgatcct gatccccctc
     1261 aagctcctca actcaggctc cggcatcatc ggcggctggt cgacgctggt tgcctcgaga
     1321 ggatcgtggc cgctgatgac gctcaggact cgggtggcgt cgtccacggt ccggccgaac
     1381 accgagatac agtcgagtga ggaaccgaat gccacgaggc cataccggct gactcgcccg
     1441 taactcggct tgactcccac aaccccgcag aaactggcag gctgacggac cgatccgccg
     1501 gtctccgatc caagtgcgac gggc
//
LOCUS       DASYRV010000509         2108 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3731842, whole genome shotgun sequence.
ACCESSION   DASYRV010000509 DASYRV010000000
VERSION     DASYRV010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2108
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3731842"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..395
                     /locus_tag="VGQ24_13615"
     CDS             <1..395
                     /locus_tag="VGQ24_13615"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEV8455931.1"
                     /translation="AAYTRALIADPNAVGALTNLARIYTEERKDLTQALELAQRAERL
                     APRDWYVQDVLGWSLHESGKTSEAVQHLEEAKRLEPQAGRARYHLGMAYLKLGMRSEA
                     AVELRAALALAPNLPQRDAIERILADLR"
     gene            502..708
                     /locus_tag="VGQ24_13620"
     CDS             502..708
                     /locus_tag="VGQ24_13620"
                     /inference="COORDINATES: protein motif:HMM:NF018096.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1059 domain-containing protein"
                     /protein_id="HEV8455932.1"
                     /translation="MLNSKMSKELRCEDVFRGCPYVGVGPDIRELMREYMVHVREVHH
                     VASPTPELRIQAMVAVRERQTQVD"
     gene            complement(723..1898)
                     /locus_tag="VGQ24_13625"
     CDS             complement(723..1898)
                     /locus_tag="VGQ24_13625"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEV8455933.1"
                     /translation="MRLFRARACWLLLVAATTVAVSGAGCAPTGVSSAPSNASVADVL
                     VGPSADSLLVGDSQQLMALSRDARGRPVTGRDISWTSLNPEIATVSATGVVSGQAAGT
                     ARIMATSEGKSGAAVMTVLPTRQDTAECDAPRPGWSWCDDFEKDRLSSYFQYAPVDGG
                     FVRRPGAGYGGSVGMRARFSRKGQVQAGFLHIAIGKTPSPYFRPVDAGTARYREIYWR
                     HLIKFQAGWIGAGGNKMSRAQVIVNTRWAQAMIGHVWSGIISEGEPYRLGLAPASGTD
                     ESGTVRTTEYNDFARFRWLGTAWSRTPIFDQMHVGKWYCIEAHARLNDPGRSNGIFEL
                     SINGAPEARVDRLNWQGGYSDYGINTVFLENYWNDGSPQPQERYFDNFIVSTQRIGC"
     gene            complement(1922..>2108)
                     /locus_tag="VGQ24_13630"
     CDS             complement(1922..>2108)
                     /locus_tag="VGQ24_13630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455934.1"
                     /translation="GVPIRYRVPYGLTGRPSSGGKLAQASAFFETDLVRLPRWSSWTN
                     MDWVAAAVRRAEKSASK"
BASE COUNT          382 a          708 c          676 g          342 t
ORIGIN      
        1 tggccgcgta caccagagcg ctcatcgccg atccgaacgc ggtcggcgcc ttgacgaatc
       61 tcgcccgcat ctacacggag gagcgcaaag acctcacgca ggccctggag ctggcccagc
      121 gggccgagcg cctggccccg cgggactggt atgtgcaaga cgtgctcggc tggagtctcc
      181 acgaatccgg caagacatcc gaagcggtcc agcacctgga agaggcaaaa cggctcgagc
      241 ctcaggcggg gcgagcccgc taccacctcg gcatggccta cctgaagctc ggcatgagga
      301 gcgaggcggc ggttgagctc cgagccgctc tcgcgctggc gccaaatttg ccccagcgcg
      361 acgcgatcga gaggatcctc gccgaccttc gctgacgcag cgcggtccag cgcgtagaca
      421 actttttgta catgccgtca tggcgtctgt cccatgtcgc tgatttcgct acgcgatcga
      481 gcatggctcg gctcttgctc aatgctgaac agcaagatga gcaaggagct gcgctgtgag
      541 gatgtattcc gaggctgccc ctacgtgggc gtagggccag acatccgtga gctcatgcgc
      601 gagtacatgg tgcacgtccg cgaggtgcat cacgtggcga gcccgacgcc tgagctgcgc
      661 atccaggcca tggtcgctgt tcgcgagcga caaacccagg tcgactgagc gagcaggcgc
      721 cctcagcagc cgatgcgctg ggtgctcacg atgaaattgt cgaagtagcg ctcctgcggc
      781 tgcgggctgc catcgttcca gtagttctcc aggaacacgg tattgatccc gtagtcgcta
      841 tagccgccct gccagttgag ccggtcgacc cgcgcctccg gagcgccgtt gatcgagagc
      901 tcgaagatgc cgttggagcg cccagggtca ttgaggcggg cgtgggcctc gatgcaatac
      961 cacttgccca cgtgcatctg atcaaagatc ggtgtgcggc tccatgccgt ccccagccaa
     1021 cggaagcggg caaagtcatt gtactcggtg gtgcgtacgg tgcccgactc atcggtgccg
     1081 gaggcggggg caagacccag ccggtaaggc tccccctcgg agatgatgcc cgaccagaca
     1141 tggccaatca tcgcctgagc ccacctggtg ttcacgatca cctgggcacg gctcatcttg
     1201 ttgccgcccg caccgatcca gcccgcctgg aacttgatga ggtgccgcca gtagatctcg
     1261 cgataccgcg ccgtcccggc gtccacgggc cggaaatacg gcgacggcgt cttgccgatg
     1321 gcaatgtgaa gaaagccggc ctgaacctgg cccttgcggg agaatcgggc gcgcatgccc
     1381 acggagccgc cgtagccggc gcccggtcgc cgcacgaagc caccgtcgac gggcgcgtac
     1441 tggaagtacg agctgagccg atccttttcg aagtcgtcac accagctcca ccccggcctg
     1501 ggcgcgtcgc attcggcagt gtcttgccgg gttggcaaaa ccgtcatgac ggcggcaccg
     1561 ctctttccct cgctggtggc catgatccgc gcggtaccag cggcctgccc gctgaccacc
     1621 ccggtggccg acaccgtggc gatctcggga ttgaggctcg tccaggaaat gtcgcgccct
     1681 gtcaccgggc gacccctcgc atctctcgac agggccatca gctgctgact gtcgccgacg
     1741 agcagactgt cggcggaagg accgacgagg acgtccgcca ccgacgcgtt ggaaggggcc
     1801 gaggagacgc cggtaggcgc gcagccggcg ccggagaccg ccacggtcgt cgccgcgacc
     1861 agcaagagcc agcaggctcg tgccctgaag agcctcatgc gttcggaacc acccacgcac
     1921 ctcacttgct ggcgctcttc tcggcgcggc gcactgccgc ggcaacccaa tccatgttag
     1981 tccaactcga ccatcgaggt aagcggacga gatccgtctc aaaaaaggcg ctggcctgcg
     2041 ccaacttgcc gccgcttgac ggccgaccag tcaggccgta gggtacccga tacctgatgg
     2101 ggactccg
//
LOCUS       DASYRV010000510         1718 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_621344, whole genome shotgun sequence.
ACCESSION   DASYRV010000510 DASYRV010000000
VERSION     DASYRV010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_621344"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(294..>1718)
                     /locus_tag="VGQ24_13635"
     CDS             complement(294..>1718)
                     /locus_tag="VGQ24_13635"
                     /inference="COORDINATES: protein motif:HMM:NF028512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEV8455935.1"
                     /translation="TLVAVTTAVHLAQLTRVVVEEAGRQAQLVARQIFAQSGRSILRG
                     SQRDPHELLRGDGELRGFLDASVGYSPHLLYVMIADPEGRIIVHTERPREGTAAPERP
                     SLDALLRDNAISRFLILYHVGQTYEVVLPMNLNGAPFGSIRLGLSTTLLRRELNAALR
                     QTVTLAALALPLAWLVAWALARLMLKPLRSLTREVGRLARGEFEIAPSTATHDEFQEL
                     SAELQRLGQQLEADRLAMVSERAHVTVQSLVSYSQRLAALGRLTSGVAHEVKNPLNSM
                     MIHVELIKERLDTPNQEVRQSLEVIGGEIRRLDRVVQGFLGFMRPHELELKAIEVPTL
                     LHSVVALVEAEWQSQGIRFVLNGAPGLPTIEADEELLRQALLNLVQNACQAMPAGGVV
                     TISAQAEQHMLRVGVTDEGVGIAPEDVERMFALYYTTRPDGTGIGLSIVYRIVQMHDG
                     TIDVRSELGHGTTMTVRLPFRSAR"
BASE COUNT          296 a          557 c          606 g          259 t
ORIGIN      
        1 atcgggaatc acgcgcggtg gtggaggcgc gggggcaggc gtcgcggccg caggccgggg
       61 agccgccgga cggcgcggct cgggggtcgg aggaactgcc ctcggtgggc taacggcaga
      121 gggcggagtc tgctgaagcg caggctcgtc cgggggatca ggcgggagca caggagccgc
      181 caccaaggcg ggcgtcaact gcacttcctc cggcgggggc gaggcaaacc agcccttgat
      241 cgtggcacac ccggtcaggc ccaggcatgc ggcgaggagg agagtggcaa ttctcaccgg
      301 gcgctcctaa acggcaacct gacagtcatg gtcgttccgt gtccgagttc gcttcgaaca
      361 tcgatggtgc cgtcgtgcat ctgcacgata cggtacacga tggagagccc gatgccggtg
      421 ccgtcgggcc gagtcgtata gtacagcgca aacatgcgct cgacatcctc gggcgctatt
      481 cccacaccct cgtcggtcac cccgacacgc agcatgtgct gctcggcctg tgcgctgatc
      541 gtgaccactc cacccgcggg catggcctga caggcattct ggacgaggtt cagcaaggcc
      601 tggcggagca gctcctcgtc cgcttcgatg gtgggcaggc cgggggcgcc gttgaggacg
      661 aaccggatgc cctggctctg ccactcggcc tccaccagcg ccaccacgct gtgaagcaga
      721 gtcggcacct cgatcgcctt cagctcgagc tcatgcggcc gcatgaagcc gagaaatccc
      781 tgcacgacac ggtcgagacg ccggatctcg ccgccgatca cctcgaggct ctggcgcact
      841 tcctggttcg gggtatccag gcgctccttg atgagctcga cgtggatcat catggagttg
      901 agcggattct tgacctcgtg ggccaccccg gaagtgaggc ggccgagggc ggccagccgc
      961 tgcgagtagc tcacgagcga ctggacggta acgtgggcgc gctccgaaac catagcgagt
     1021 cgatcagcct cgagctgctg cccgaggcgc tgcagctcgg cggagagctc ctggaactca
     1081 tcatgggtgg cggtggatgg cgcaatctcg aactcgccgc gcgcgagccg tcccacctcg
     1141 cgagtgagcg agcgcaacgg cttcagcatg agccgggcga gagcccacgc caccagccag
     1201 gccagcggca aggcgagggc ggccagggtc accgtctgac gcagggccgc gttcagctct
     1261 cgacgcagca aggtcgtgct gaggccgagg cggatgctcc cgaagggcgc gccgttcaga
     1321 ttcatcggca acaccacctc gtaggtctgc cccacgtggt acaggatgag aaagcgtgag
     1381 atggcgttgt cccggagcag ggcatcgagg ctcggtcgct cgggcgccgc ggtgccttca
     1441 cgcggacgtt ccgtgtgcac gatgatgcga ccctcggggt ccgcgatcat gacgtagaga
     1501 aggtgcggcg aatagcccac gctggcatcg aggaaaccgc gcagctcacc gtcgccccgc
     1561 agcagctcgt gcgggtcgcg ctgtgagccg cggaggatgg aacggccgct ctgcgcgaag
     1621 atttgcctcg ccacgagctg ggcctgccgc cccgcttcct ccaccaccac gcgggtgagc
     1681 tgagcaaggt gcacggcggt cgtcacggcg accagggt
//
LOCUS       DASYRV010000511         3047 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2284140, whole genome shotgun sequence.
ACCESSION   DASYRV010000511 DASYRV010000000
VERSION     DASYRV010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3047
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2284140"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..561
                     /locus_tag="VGQ24_13640"
     CDS             <1..561
                     /locus_tag="VGQ24_13640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455936.1"
                     /translation="YGLPLPERAVGEIVARGPSVMQGYFEQPESTARALRDGWLHTGD
                     EGYLSNGDLYVCGRQKDIVIVNGRNFYPEDLEWAVGELPGVRSGNVVAFGVGGLGSGD
                     RERVVVVVESKGKLPADELALEVRRRIVDSVGLQVDEVVIAPSGTVQRTSSGKVKRSQ
                     LKSQFESGTLRTKPTPTWISSTSYAP"
     gene            531..1763
                     /locus_tag="VGQ24_13645"
     CDS             531..1763
                     /locus_tag="VGQ24_13645"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEV8455937.1"
                     /translation="MDLLDKLRAVAARTAPFEGAACRPFDTVFDEVLGPCEVVFQGRP
                     VLMFGSNNYFGLSFHPAVQAAAREAVGRFGSGSTGSRVANGTLRIHEELERDFAETFG
                     KRHGMIFSTGFQANLCLVAGLCGTEDTVLLDAACHASIYDGAKLSGASVLAFRHNSAS
                     DLAKKLDRLPRGQRNRLVVVEGLYSIHGDVAPLEDILAACRAGGAYLLVDEAHSFGVY
                     GDRGLGCADEQGVLEQVDFVVGTFSKALAAVGGFAISDHPELRMLHFAARPYVFTASP
                     SPATVAGVQAALRVLRDDRRSRPRLWENVRRMRSGLSRMGYSIGPVESPIVPILIGEE
                     ALTVGMWQALLEAGLYVNIVLPPGCPKGQCLLRTSYSSAHSPAQIDAALEIFAAVGKQ
                     AGVLMEGGSGVAQEAAAH"
     gene            1735..>3047
                     /locus_tag="VGQ24_13650"
     CDS             1735..>3047
                     /locus_tag="VGQ24_13650"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEV8455938.1"
                     /translation="MSPKKLLLINPRNRVSLYGEYLWEPLALAYVAAVTPKHWDVELI
                     DEQCEGLRDYGDVKADLVGITAFTTQVTRAYDIAAHFRGRGIPVVLGGIHASLVPTEA
                     IQYCDAIYLGECESGWPELITDVEAGKLQKTYQGKNLPPEQHTWPDRSIFKKYHYEYV
                     SAQTTRGCPMDCSFCSVTVFNGNIFRMRDVDDVVAEVRAIPHRDIIFVDDDLNGFSRK
                     AKERCLALFRAMIAADLGKRWITQVTINFGDDDEMLELARAAGCAGVFIGLESTDTAS
                     LQLIRKDGKSQKRGTAYYEDNIARIHRHGIGVVGSFILGIDSQNMETIAPEILAFAER
                     VRLDGMNLTILTPLPGTRDYVRYDQEGRILFKDYPGDWEKYTLAFPVTRMLHVSGAGL
                     MKRYFEVLQFFRPEHLAELYWRTHHEVSPDAAWHVFRWNRVWSNY"
BASE COUNT          514 a          990 c         1001 g          542 t
ORIGIN      
        1 tacgggctgc ccctgccgga gcgggccgtt ggggagatcg tggcccgcgg cccttcggtg
       61 atgcagggct acttcgagca accggaaagc acggcccggg cactgcggga cggctggctc
      121 cacaccggcg acgaaggata cctctcgaac ggcgacctct acgtctgcgg gaggcagaag
      181 gacatcgtga tcgtcaacgg tcgcaacttc tatcccgagg atctcgagtg ggccgtcggt
      241 gagctgccgg gagtccgctc gggcaacgtg gtcgccttcg gagtcggcgg cctgggcagc
      301 ggtgaccgcg agcgcgtcgt cgtagtggtg gaatccaagg ggaagctgcc cgcggacgaa
      361 ctggcgctcg aagtgcgccg gcggatcgtc gacagtgtcg gactgcaggt ggacgaagtc
      421 gtgatcgccc cctcgggcac cgtgcagcga accagcagcg ggaaggtgaa gcgctctcag
      481 ctcaagtcac aattcgagtc cggcacgctg cggacgaagc cgacaccgac atggatctcc
      541 tcgacaagct acgcgccgta gccgcccgca cggctccgtt cgagggcgct gcctgccgcc
      601 cgttcgacac cgtcttcgac gaggtcttgg ggccctgcga ggtggtcttc cagggtcgtc
      661 cggtgctgat gttcggctcg aacaattact tcgggctgag cttccatccc gccgtccagg
      721 ccgccgcgcg cgaagcggtg ggacgcttcg gcagcgggag caccggctcg cgcgtagcca
      781 acggcacgct gcggatccat gaggagctgg agcgcgactt cgccgagacc ttcggcaagc
      841 ggcatgggat gatcttctcc accggcttcc aggccaatct ctgcctggtg gcaggtctgt
      901 gcggcaccga agacaccgtc ctgctcgatg cggcgtgcca tgccagcatt tacgacggcg
      961 ccaagctctc gggcgcctcc gtcctggcct tccgtcacaa ttccgcgagc gacctcgcca
     1021 agaagctcga ccggctgccc cgcggacagc gcaatcgcct ggtggtcgtc gaaggcctgt
     1081 actcgattca cggcgacgtg gctccactcg aggacatcct cgccgcctgc cgggcgggcg
     1141 gggcctatct cctggtcgac gaggcccatt cgttcggcgt ctatggcgat cgcgggctcg
     1201 gttgcgccga tgaacaggga gtgctggaac aggtagattt tgtcgttggg acgttctcca
     1261 aggcgctggc ggcggtgggt gggttcgcca tctcggatca tcccgagttg cgcatgctgc
     1321 atttcgcggc gcgcccctat gttttcacgg cctcgccctc gcccgccacg gttgcgggag
     1381 tccaggccgc cctgcgcgtg ctccgggacg atcgccgctc ccgcccgcgc ctgtgggaga
     1441 acgtccggcg gatgcgctcg ggtctctcgc gaatgggtta ttcgatcggc ccggtcgagt
     1501 cccccatcgt gccgatcctg atcggggaag aagccctcac ggtcggcatg tggcaggcgc
     1561 tgctcgaggc tggactctat gtgaacatcg tccttccgcc cggctgccca aagggacagt
     1621 gcctgctccg caccagctat tcgtccgctc atagtccagc gcagatcgat gccgcgctgg
     1681 agatcttcgc agccgtcggc aaacaggctg gcgtgctcat ggaaggaggc tccggtgtcg
     1741 cccaagaagc tgctgctcat taacccgcgc aaccgcgtct cgctctacgg cgagtatctc
     1801 tgggagccgc tcgcgctggc gtacgtcgcc gcggtcactc ccaagcactg ggatgtggag
     1861 ctgatcgacg agcagtgcga ggggctccgg gactacggcg acgtcaaagc ggatctggtg
     1921 ggcatcaccg cgttcaccac ccaggttacc cgcgcatatg atatcgcggc gcatttccgc
     1981 ggccgcggga ttcccgtggt gctgggcgga atccacgctt ccctcgtgcc gaccgaggcg
     2041 atccagtact gcgacgcgat ctacctgggt gagtgcgaat ccggctggcc ggagctcatc
     2101 acggacgtcg aggccggcaa gctgcagaag acctatcagg gcaaaaacct gccgcccgaa
     2161 caacacacct ggcccgaccg gagcatcttc aagaagtatc actacgaata cgtctcggcc
     2221 cagacgactc gtggctgccc catggactgc tcgttctgct cggtgacggt gttcaacggc
     2281 aacatcttcc ggatgcggga cgtggacgat gtcgtggcgg aggtgcgggc catcccgcac
     2341 cgcgacatca tcttcgtcga tgacgacctc aacggcttct ccaggaaagc caaggagcgc
     2401 tgcctggcgc tgttccgcgc catgatcgcc gcggacctgg gcaagcgctg gatcacgcag
     2461 gtcaccatca acttcggcga cgacgatgag atgctggagc tggcccgcgc ggccgggtgc
     2521 gccggagtct tcatcggact ggagagcacc gacaccgcgt ctctccagct catccgcaag
     2581 gatgggaagt cccagaagcg cggaaccgcg tattacgagg acaacatcgc ccggatccat
     2641 cgccacggca tcggggtggt gggctccttc attctgggga tcgacagcca gaatatggag
     2701 accatcgcac cggagatcct tgccttcgcc gaacgggtcc gcctggatgg aatgaacctg
     2761 acgattctga caccgctgcc gggtacccgc gactacgtcc gctacgacca ggaaggccgt
     2821 atccttttca aggactatcc cggcgactgg gagaaataca ccttggcgtt tccggtcacg
     2881 cgcatgctgc acgtgagcgg cgccgggctg atgaagcggt atttcgaggt cctgcagttc
     2941 ttccggccgg agcaccttgc ggagctgtac tggcggaccc atcacgaggt ctcgcctgac
     3001 gcggcatggc acgtgttccg ctggaatcgg gtctggtcca actactg
//
LOCUS       DASYRV010000512         3915 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_4147281, whole genome shotgun sequence.
ACCESSION   DASYRV010000512 DASYRV010000000
VERSION     DASYRV010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3915
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4147281"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(162..1349)
                     /locus_tag="VGQ24_13655"
     CDS             complement(162..1349)
                     /locus_tag="VGQ24_13655"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEV8455939.1"
                     /translation="MRLSFHQRILLILICLGAVPTAAAILGWGLTIRSSARAPGARDA
                     IEGVAASGRLLLHTIDSTRLMSVERRALADHASKLNTAIGQFQRADTFSRYYYAGLGL
                     VILLLGATFIYASIRFGGHLSRQLSRPIEELIGWTGNIRRMEPLPPDRPRRGAPEFAA
                     LRTALREMASALERARSQEIEAERLRAFRETARRVAHEMRNPLTPMRLAVAQLARSGA
                     AEQQEAIEVLAAESDRLEQLAREFTEFGRLPEGPAAPVDFTELLAELARTSLPQTMKA
                     RVNLDPATPVLLGHYDPLRRAFSNILRNAAEACEEHGELEITAAPDDGGGVRIEIRDH
                     GPGVPADMADRIFDPYYTGKAGGTGLGLALVKQTIEMHGGTISLSHTPGGGATFQVRL
                     GAR"
     gene            complement(1545..2765)
                     /locus_tag="VGQ24_13660"
     CDS             complement(1545..2765)
                     /locus_tag="VGQ24_13660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455940.1"
                     /translation="MRQFWRSPTIRTVVVYGASGVGFAGANLVLARFLPTAEYAVFTL
                     VIALANLGYSLAPAGVDGIVNRRHLDAGPRLLRRTLSASLLVGVAFVIAAQLSYHISA
                     ALVLLLFVSTVAGGAMAVAGAQFQSERRYGISLALTQSPNLALLVAALAVIASHDRRA
                     WLPLSISMLGFVLAAVYGWWVLFRERATKPVRGSWFPWGEALSFAGLNGAGLFLIQLD
                     RLVIPHVLSLHDLATFGVLAPIAGSLFRVLQMGVGYTLVPRLRAPGTVPERRELIVHE
                     AKLVAVLVVAGSVTLWLVTPLIERWFLEGKYHLTGPLLLAALVSGVAKIMDAFTKSTV
                     TALATPVELSLVNLLGWASVALAVPAAVFGARWGLAGVIYGVGFGWLLRSLTGLYITL
                     RHLKLPASIPVTAP"
     gene            complement(2868..3836)
                     /locus_tag="VGQ24_13665"
     CDS             complement(2868..3836)
                     /locus_tag="VGQ24_13665"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8455941.1"
                     /translation="MEPSAKAGNTTIPADPGIVSVVVPVVERTDDLIAVYHAFARELG
                     RRSEEFEFLFVFDGRFAPPPELVALSREKEGVRILRFAREFGETAALRIGIEKSRGDL
                     VLTLPAYFQVQPEGFGLLLDAIAAGADMAVANRSPRLDNWLNRMQSRAFQRIVSGVTD
                     QQFHDMACGVRAMRRTVAEALPLYGDLHRFIPALAVREGYRVVEVPLAQHPSDARTRL
                     YRPSVYFRRLIDIAAFFFLAKFTERPLRFFGLVGSVFLLSGAALSLVLLVQRFEGQGI
                     ANRPALLLAVLLVALGVQLIGLGLVGEIIVHLRAPHRRAYRVRERT"
BASE COUNT          728 a         1296 c         1310 g          581 t
ORIGIN      
        1 atccagcagc accacgtcgg gatcggtctg gtccagcagc aggagcgcgg cgtttccgct
       61 ggctgcttcg gtgacggtga acccctcgtt ccgcaacagc gcgccgagca tccggcggat
      121 gtttgcctca tcgtccacca ggagaatctg ggcgctgccg ctcacctggc cccgagccgt
      181 acctggaagg ttgcgccgcc gcccggggtg tggctgaggc tgatcgtgcc gccgtgcatc
      241 tcgatggtct gcttcaccag cgcaaggccc agtccggttc ctccggcctt ccctgtgtag
      301 tagggatcga agatccggtc ggccatgtcc gcggggacac ccggtccgtg atcgcggatc
      361 tcgatccgaa cccctcctcc gtcgtccggc gccgccgtga tctccagttc gccgtgctcc
      421 tcgcacgcct ctgccgcgtt tcgaaggatg ttgctgaacg cgcggcgaag tggatcgtag
      481 tgccctaaaa ggactggcgt ggcggggtcc agattcaccc gggccttcat tgtctggggg
      541 agggaagtgc gggcgagctc ggccagcagt tcggtgaaat cgaccggtgc agccggtcct
      601 tcaggcagtc gaccgaactc ggtgaactcg cgggcaagct gctccaaccg gtcggattcc
      661 gccgcgagca cctcgatggc ctcctgttgc tcggcggctc cggatcgcgc cagctgggcc
      721 accgccagcc gcatcggggt gagcgggttc cgcatctcgt gcgcgacccg gcgcgcagtc
      781 tcgcggaagg cccggagccg ttcggcctcg atctcctgcg agcgggcccg ctccagcgcg
      841 gaggccatct ccctgagcgc ggtgcggagg gccgcaaatt cgggggcacc acgacgtggc
      901 cgatcgggcg ggagcggctc catccggcgg atgttcccgg tccacccgat cagctcctcg
      961 atgggccggc tgagctggcg cgagaggtgt ccgccgaagc gtatcgaggc gtagatgaaa
     1021 gtggcgccaa gcaggaggat gaccaggccc agaccagcgt agtagtagcg gctgaaagta
     1081 tcggcgcgct gaaactgacc gatggcggta ttcagtttgc tggcgtgatc ggccagggct
     1141 cgtcgctcga ccgacatgag gcgggtcgaa tcgatggtgt gcagcagcag tctgccggag
     1201 gcggcgactc cctcgatggc gtcgcgcgct ccgggagccc gggctgacga gcggatggtc
     1261 aggccccagc cgaggatcgc cgccgcggtc ggcaccgcgc cgaggcagat caggatcagc
     1321 aggattcttt gatggaagga gagacgcatc gccctgcaag ataagccgcg gcgctggggc
     1381 ggcccatccg gtgccggttc cgcgccactc cctccaggtg ggtcccccga gcgcagccgg
     1441 cgaggcgggg ggatcagccc ttaccggggc aggggagcgg cgacgaagcc cctagggact
     1501 ggcccgtggg ctatccgagc tcgaccgttg atgacccctg gacatcatgg ggcagtcacc
     1561 ggaatcgagg ccgggagttt gaggtggcgg agggtgatgt agagcccggt gagcgagcgg
     1621 agcaaccacc cgaatccaac tccgtagatc acaccggcaa ggccccacct cgccccgaag
     1681 accgccgccg gcacggcgag cgccacggag gcccagccca acaggttcac cagggacagc
     1741 tccaccggcg tagccagagc ggtcaccgtg gacttggtga acgcgtccat gatcttggct
     1801 acgccgctga ccagcgctgc caacaggagg ggcccggtca ggtggtactt accctcgagg
     1861 aaccagcgct cgatcaacgg cgtcaccagc cagagggtca ccgaacccgc caccaccaag
     1921 acggcgacca gcttggcctc gtgcacgatc agctcccggc gctctggcac ggtgcccggg
     1981 gcgcgcagtc ggggaacgag ggtatagccc acacccattt gcaacacgcg aaagagagag
     2041 ccggcgatcg gcgccagtac tccgaaggtg gcgagatcgt gaagcgagag aacatgagga
     2101 atgaccagcc ggtcgagctg gatcaggaac agtcccgcgc cgttgagacc cgcgaaggac
     2161 agcgcctctc cccaggggaa ccagctgccg cggaccggtt tggttgcacg ctcacgaaag
     2221 agcacccacc agccgtagac ggctgcgagc acgaagccga gcatcgagat cgaaagggga
     2281 agccaggccc gtcggtcgtg cgaggcgatc acagccaggg cggcaaccag cagcgccaaa
     2341 ttgggacttt gagtcagcgc cagtgagatg ccgtaccgcc gctcactttg aaactgcgcc
     2401 cccgccaccg ccatcgcccc gccggccacg gtcgagacga acaggagcag gaccagcgcc
     2461 gcgctgatgt ggtaactaag ctgggcggcg atcacaaagg ccaccccgac cagaagcgac
     2521 gcactaaggg tacggcgcag cagcctcgga cccgcatcca ggtggcgacg gttgacgatg
     2581 ccgtccaccc cggcgggtgc caacgaatat ccgagattgg ccagcgcgat gacaagggtg
     2641 aagactgcgt actctgccgt cggcaggaac cgggcgagga cgaggttcgc tccggcgaat
     2701 cccacccccg aggcgccgta cactactacg gtccggatgg taggggagcg ccagaattgc
     2761 ctcatgatac ggcctcgctc gccttcgact ccatcatgct gtagaaggag ctcagctttc
     2821 gttcggcggc tctcccagcc gacatcctca ttgaaggcta acgacgctca agtccgttcg
     2881 cgtactcggt aggcccgccg gtgcggcgcg cgcaagtgca cgataatctc tcccaccagt
     2941 cccaggccga tgagctggac tccgagggcg accagcagaa cggcgagcag gagggccggc
     3001 cgattggcaa ttccctggcc ctcgaagcgc tggaccagca gcaccagact gagggccgcc
     3061 ccagatagca ggaacaccga gcccaccagc ccgaagaaac gcagcggccg ctcggtgaat
     3121 ttggccagga agaagaaggc cgcgatatca atgagccggc ggaaatacac gctggggcgg
     3181 tacaaccggg ttcgtgcgtc gctgggatgc tgagccaacg ggacttcaac gacccggtac
     3241 ccctcgcgaa cggcgagcgc cggaatgaac cggtgcaggt cgccatacag cggaagcgcc
     3301 tcggctacgg tgcgacgcat cgcgcgaacc ccgcaggcca tatcgtggaa ctgctgatcg
     3361 gtcacgccac tgacgatccg ctgaaaagcc cgggactgca tgcgattgag ccaattatcc
     3421 agccgcggcg accggttggc cacggccatg tcagccccgg cggcgatcgc gtcgaggagc
     3481 aggccgaacc cctccggctg cacctggaag tacgccggca aggtcagcac cagatctccc
     3541 cggctcttct cgatcccgat gcggagtgcc gcggtctccc cgaactcgcg agcgaaccgg
     3601 aggattctca ccccctcctt ttcacggctc agtgcaacca gctctggtgg gggagcaaag
     3661 cgcccgtcga acacgaacag gaattcgaac tcctcggagc gacgtcccag ctcccgggcg
     3721 aacgcgtggt agactgctat gaggtcgtcg gtccgctcga ccactggaac gaccaccgac
     3781 acgattcccg gatcggccgg gatcgtggtg ttcccggcct tcgcgctcgg ttccatcagg
     3841 gttccttggg cggccatatc agcgaacctc ggacgccgtg ggcgtgtcgt tcatgtgccc
     3901 gcgttcgctg ctgag
//
LOCUS       DASYRV010000513         6245 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3224243, whole genome shotgun sequence.
ACCESSION   DASYRV010000513 DASYRV010000000
VERSION     DASYRV010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6245
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3224243"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(76..759)
                     /locus_tag="VGQ24_13670"
     CDS             complement(76..759)
                     /locus_tag="VGQ24_13670"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEV8455942.1"
                     /translation="MSLGLDGRHVVITGGDGALGHAVVEAFVGAGAICHLPIRGPAPA
                     ESPAGVHTTGGVNLTEEQAVIGYYASVPPPAASIHLAGGFKAKPIAETTRADLEQQLL
                     LNLATAFLCCREAVKTMRPHGGGRIVNVAARVVEVPSSGMVAYTISKAGVAALTRALA
                     EEVRGDGIQVNAVLPSIIDTPANRAAMPSAPVDRWPKPAELANAILWLASPENRLTSG
                     ALIPVYGNA"
     gene            827..1381
                     /locus_tag="VGQ24_13675"
     CDS             827..1381
                     /locus_tag="VGQ24_13675"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEV8455943.1"
                     /translation="MGLVLLVSGVLVALYGIWTFNRLTQLRQLADNAWADIDVQLKRR
                     HDLIPSVVSVVKGHAGYEKGTLEAVVAARDRALGASGPAAKADAEDPVTGSLRRIFAI
                     AEAYPDLRAAESFRELQRTLSDLEDHLQSARRYYNAVVRDLNTKIAQFPSSLVAGLLR
                     VQPREFFGLDDISEGAVPRVDVGA"
     gene            1384..3105
                     /locus_tag="VGQ24_13680"
     CDS             1384..3105
                     /locus_tag="VGQ24_13680"
                     /inference="COORDINATES: protein motif:HMM:NF044955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2207 domain-containing protein"
                     /protein_id="HEV8455944.1"
                     /translation="MRTLLLLLLSAGGVTRATAQRTLVIERFSATIRIDPSGDLHVAE
                     SITARFTGSWNGIIRSIPVKYRTPQGFNWTLRLDLESVTGEANQPLRTETSREGHYLK
                     YKIWVPGAQDATRTFVLKYRARNGLRFFEEHDELYWNVTGDEWDVPIEAAEATIELPP
                     GAGAVRATAFNGAYGSTARDAVIGIDERTVRISMPNRLEFHEGLTAVVGWNKGAVVEP
                     TAADRAAGLLSSNWPLVIPVPVFLGMFWLWRRRGRDPRLRPIAVQYEPPTGLLPGEVG
                     TLVDNRADMRDVTATMVDLAVRGYLKFEEREENKLFGLLHEREYILHRRKPRSEWSGL
                     VAHERKVLEGIFKKDAAESVQLSELENEFYKSLADIKEGIFDRLLQKGFYRARPDTVR
                     GWWVTGAVVAGLILAGVGSSLAARWSLTPLPFFVAGILSTIIMLGFGLAMPARTAAGA
                     RALEQVLGFEEFLGRVEAEHFERVVKTPELFDRYLPFAMALGVDRKWAKAFEDIYTQP
                     PTWYAGSSGTGGITQFNVAQFSSRLGDFSGKASSTLSAAPRSSSGSGFSGGSSGGGGG
                     GGGGSGF"
     gene            3180..4316
                     /locus_tag="VGQ24_13685"
     CDS             3180..4316
                     /locus_tag="VGQ24_13685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455945.1"
                     /translation="MQQSALHFSCACALAGILAAPVEAQVVRLATPNARLAEEFSAIR
                     GVRELADGRVLLSDYIDQRVVLVDLTRGSVVQRVGKGGGPTEARLPTRLIPVSPDTTI
                     LVDLGNNRLLLLDGEGRAVRTIAGERPGVLGVRGVDAGGALYYAVPGWAEQHPLQNDS
                     VRIVKWKPRRGTEETLAVVQGERMRSDIRQPALTPRIPLVGYGSQDGWVVAEGGVVWI
                     VRTGGYRVERRVPGSPPVVGPSYAYPTRAVSEADRLAFVREFLATSPTSGKGEGGGMG
                     FSPTLNQQEVAEMLRGTQFAERHPLFDAGRVIAAPGGRLWVGRPAEPGKPVLYDVFDE
                     TGRRLTMIELLPARRIIAIGRQSVYIVAESESGIQHLERYPLPR"
     regulatory      4607..4707
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01051"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class I; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01051"
     gene            4728..6092
                     /locus_tag="VGQ24_13690"
     CDS             4728..6092
                     /locus_tag="VGQ24_13690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455946.1"
                     /translation="MSSDHCGRLASSAIIRSFCYALATLLAVACSEPMSPQDGRLDLE
                     IESPHPPPPPPAPPPAPSGTGQTAFVASCASCHASRDGFDLAYFSYSDTNIVRRALKH
                     VSSATAWSIATYIATIPSPKVPENTLLFQPGGSVISGGTNATGDVNFALAAFGQNAWP
                     ASYTRNDVLAINPKTLRIALPLLPWSDETNTREWMPKDSLPLPILTFNGNAAANALAA
                     YYANPTVAGLEAVSAAVNNASYNVANSIAPCQVAVISRTDFQQCFEIRRWVASLSVTH
                     KLRTGIAFLSPALYLDWWNVGNIARLSRGYPGQVPDYLQQQARWMYLGWMHDVPNEPA
                     KYGTDAFRTLGMPRHATWKALRSIVARAPGVFLENVSPYVDFKEIALSTPAGTAWSYN
                     AGKFGLNELLRRLSSGDRPPTAALRTEAKDLINVGMSNLRPKVSASEFLSLTTLATAV
                     LAKL"
BASE COUNT         1091 a         1956 c         2092 g         1106 t
ORIGIN      
        1 gacttgcgct tggttgctgg ctttgccttc ggcttcggct tggagggcgg tttggtggcc
       61 atggaaagga cagttctagg cgttcccgta caccggaatc aaggcgcctg aggtgaggcg
      121 gttctcgggt gaggccagcc agagaatggc gttggcgagc tccgccggtt tgggccaacg
      181 gtccacgggc gcactcggca tggcggcccg gttggccggg gtgtcgatga tcgagggcag
      241 tactgcgttg acctgaatcc cgtcgccgcg cacttcctca gcaagcgcgc gagtgagcgc
      301 cgcgactcct gccttggaga tggtataggc caccatgccg ctggacggta cctcgacaac
      361 tcgagcagcc acgttcacga tgcgccctcc gccgtgcggc cgcatcgttt tcaccgcctc
      421 ccgacagcac aagaacgccg tggcgaggtt gagcaggagc tgttgctcga ggtcggcacg
      481 ggtggtttcg gcgatcggct tggccttgaa accgccggcc aggtggatgg aggcggcggg
      541 cggtggaacg ctggcataat agccgatgac ggcctgttcc tcggtgagat tgacgccgcc
      601 ggtggtgtgc acgccggcag gggactccgc cggggcggga ccccggatcg gaaggtggca
      661 gatggcaccg gcgcccacga atgcctcgac aacggcgtgg cccaatgcgc cgtcgccccc
      721 ggtgatcacc acatgacgcc catccaggcc caggctcatg ggcgaatagt aacgtctatg
      781 ccgtgccgta tattggggac ctctcaatgc atcccggagc gccgtcatgg gtctggtcct
      841 gctggtaagc ggcgtcctgg tcgccctcta cgggatctgg acgttcaatc ggctgaccca
      901 gctccgccag ctggccgaca acgcctgggc cgacatcgac gttcagttga agcgcaggca
      961 tgacctgatt ccctccgtag tgtccgtcgt gaagggacac gccggctacg agaaggggac
     1021 cctggaagcc gtcgttgcgg cgcgcgatcg ggcgctggga gcgtcgggcc ctgccgccaa
     1081 agccgatgcc gaggatccgg tgacggggtc cctgcggaga attttcgcta tcgccgaagc
     1141 gtaccccgat ctccgtgccg cggagagctt ccgcgagctg cagcggacgt tgagcgacct
     1201 cgaagatcac ctccagagcg cgcgccgtta ctacaacgcc gtggtgcgcg atctcaacac
     1261 caagattgcc cagttcccct cgagcctcgt cgccggcctg ttgagggttc agcctcgaga
     1321 gtttttcggg ctggacgaca tctccgaggg cgcagttcct cgcgtggatg taggggcctg
     1381 agcatgcgga ccttgctgct gctcctgctc tcggccggcg gggtaacccg cgcaacggcg
     1441 cagcggacac tcgtcatcga gagattctcg gcgacgatcc ggatcgaccc gagcggcgac
     1501 ctgcacgtcg ccgagtcgat caccgctcga ttcaccgggt cgtggaacgg gatcatccgc
     1561 tctatcccag tgaagtaccg cactccgcag ggcttcaact ggaccctccg cctcgacctc
     1621 gagagcgtta cgggggaagc caaccagccg ctccgcaccg agaccagccg cgaggggcat
     1681 tacctcaagt acaagatctg ggtgccgggc gcccaggacg ccacgcgcac gttcgtgctc
     1741 aaataccggg cgcggaacgg gctgcgtttc ttcgaggagc acgacgagct ctactggaac
     1801 gtgaccggtg acgaatggga tgtaccgatt gaggctgcgg aggccacgat tgagcttcct
     1861 cccggtgcgg gagcggttcg cgcgacggca ttcaatgggg cctacgggtc gaccgcgcgg
     1921 gacgccgtca tcggaatcga cgagcgaacc gtgcggatca gcatgccgaa ccggctcgaa
     1981 ttccacgagg gactcaccgc ggtggtagga tggaacaaag gcgccgtcgt ggagccgacg
     2041 gcggccgatc gcgcggcagg actcctcagc agcaactggc cgctcgtgat tccggttcca
     2101 gttttcctgg gcatgttttg gctgtggcgg cggcgcggcc gggatcccag gctgcgcccc
     2161 atcgcggtgc agtacgagcc gcccacgggg ctcctgccgg gggaagtggg aaccctggtc
     2221 gacaacagag ccgacatgcg ggacgtcacg gccacgatgg tggatctcgc ggtgcgcggc
     2281 tacctcaagt tcgaggagcg ggaggagaac aaactcttcg ggttgctgca cgagcgggag
     2341 tacatcctgc accggcgcaa accgcgctcg gagtggagcg ggctcgtggc gcacgaacgg
     2401 aaagtcctgg agggcatctt caagaaagat gctgccgaat cggtgcagct gtcggagctc
     2461 gaaaacgagt tctacaagag tctggcggat atcaaggaag gcatcttcga tcggctgctc
     2521 cagaagggct tctaccgcgc gcgcccggat acggttcggg ggtggtgggt gaccggtgct
     2581 gtggtcgccg ggctcatcct tgcgggggtc ggttcatcgc tggctgcgcg ctggtcgctt
     2641 acgccgctgc cgtttttcgt tgcggggatt ctgtcgacca tcatcatgct cgggttcggg
     2701 ttggccatgc cggcccggac cgcagcggga gcccgggcgc tcgagcaggt gctgggattc
     2761 gaggagttcc ttgggcgggt cgaagccgag catttcgagc gagtcgtgaa aaccccggag
     2821 ctcttcgatc gctatctgcc cttcgccatg gcattgggcg tggataggaa atgggccaag
     2881 gccttcgagg atatctacac ccagccgccc acctggtatg cgggctcgag cgggaccggt
     2941 gggatcaccc agttcaacgt ggcccagttc tcgagtcggc tgggagattt ctccggcaag
     3001 gcgagctcta cgctgtcggc ggcgccgcgg agctcgagcg gctcgggatt cagcggtgga
     3061 tcctccgggg gcggcggagg gggaggtggt ggcagcggat tctaggcacc ctgattacga
     3121 ccttccaagc tcgcgcctgc aactcgaagc ggcggcgaag catcctctgg gatactccga
     3181 tgcagcagtc agcccttcac ttttcctgcg cctgcgctct ggcggggatc ctggccgccc
     3241 cagtcgaagc ccaggtggtt cgtctcgcca ctcccaacgc caggctggcc gaggagtttt
     3301 cggcgatccg cggggtgcgc gagctggccg atggccgggt tctgctcagt gactatatcg
     3361 atcagcgtgt cgtgctggtg gatctcaccc gaggcagcgt ggtccagcgg gtgggcaagg
     3421 ggggcggccc gaccgaggcg cgacttccca ctcggctgat cccggtttcc ccggacacca
     3481 cgatcctcgt agacctcggc aataaccggc tcctgctgct cgacggcgag ggccgggcgg
     3541 tgcgaaccat cgctggagag cgcccgggcg tgctgggggt gcgaggcgtc gatgccggcg
     3601 gcgccctcta ctatgccgtg ccgggatggg cggaacagca cccactccag aacgactccg
     3661 tgcggatcgt caaatggaag ccgcgcaggg ggacggagga gactctcgcc gtcgtgcagg
     3721 gagagcggat gcgatcggac atccgccaac cggcattgac gccgcggatt cccctcgttg
     3781 gatacggctc gcaggacggc tgggtggtgg cggagggggg cgtcgtgtgg atcgtgagga
     3841 cgggaggcta tcgagtcgag cggcgggtgc cgggatcccc gccggtcgtc gggcccagtt
     3901 acgcctatcc gacccgcgcg gtgagtgagg ctgatcgcct ggcgttcgtg cgagaatttc
     3961 tggcgaccag tccaacgagc gggaagggtg agggaggtgg gatggggttc tcgcccaccc
     4021 tcaaccagca ggaagttgcc gagatgcttc gcggtacgca gttcgccgag cgacatccgc
     4081 tgttcgatgc tggaagagtg atcgccgcac cgggcgggcg cctgtgggtg gggcgtccgg
     4141 ccgagcctgg caagccggtc ctctacgatg tgttcgacga aacggggcgg cggctaacga
     4201 tgatagaact cctgccggcc cggcggatta tcgcgatagg acggcagagc gtgtacatcg
     4261 tggcggagtc ggaatccggc atccagcacc tcgagcgtta tccgctgccg agataggcgg
     4321 ggagcgagtc gcttgcgatg ggcgcgcccc aagggctagc accacaggat tggcgcaatg
     4381 tcaacgagga gtgcggggcg tttctcagat ccaagaccgg agtgtacgag attcgcctct
     4441 tgacgcggtg tgcatgcatc accaatgtgc gtcgtcccta acgcgtttcc gcgcgtcatc
     4501 caaaggagct ccccaagagc cttgacggcg cagctgtctc agtgcggacc gctcgccagc
     4561 atctcaaaaa ccgaaccggc acgatcgctc ccttccctcg gaagggtcgc gacaaaggca
     4621 aacccgttga aaaacgggga cgcaaagctc cgaggctacc gccgtggtgc accgaggcac
     4681 ccgagccacg ccagtcgagc cgccgaccca cccctcagga ggggtttatg tcctcagacc
     4741 actgcgggcg actcgcgagc agtgcgatca tccggtcctt ttgctacgcc cttgccacgc
     4801 tgcttgcagt cgcctgttcc gagccgatgt caccccaaga tgggcgactg gacctcgaga
     4861 tcgagtcccc gcatccgccg ccaccgccgc cggctcctcc tcctgctccc agtggcaccg
     4921 gtcaaacggc cttcgtcgcc tcgtgtgcaa gctgtcatgc gtcgcgcgat ggcttcgacc
     4981 tcgcctattt cagctactcc gacaccaata tcgtccggcg ggcgctgaag cacgtctcta
     5041 gtgcaacggc ctggagcatc gccacttata tcgccacgat cccgagcccc aaggttccgg
     5101 agaacacgct cctgtttcag ccaggcggaa gtgtgatttc aggcgggacg aacgcaacgg
     5161 gagatgtgaa ctttgccctc gccgctttcg ggcagaacgc ctggcccgcg agctacaccc
     5221 gaaacgatgt gctggcgatc aaccccaaga cgttacgcat tgcgctgccc ctgctgccct
     5281 ggtcggatga aacgaatacg cgggagtgga tgccgaagga ttccctcccg cttcccatcc
     5341 tcaccttcaa cgggaacgcg gccgccaatg cattagcggc ctactacgcg aacccgacag
     5401 tcgctggcct ggaagcggtg agtgcagcag tgaacaatgc ctcgtacaac gtcgccaaca
     5461 gcattgcccc gtgtcaggtc gcggtgatct cgcgcaccga cttccagcag tgtttcgaga
     5521 ttcgccgctg ggtggccagt ctctcggtca cccacaaact gaggacgggc atcgcgtttc
     5581 tgagcccggc cctctatctc gactggtgga atgtgggcaa cattgccagg ctctctcgcg
     5641 gctaccccgg gcaagtcccg gactatctac agcagcaagc tcggtggatg tacctgggct
     5701 ggatgcacga tgtgccgaat gagccagcga agtatgggac ggatgccttc cgcacgctgg
     5761 ggatgccccg gcacgctacg tggaaagcgc tgcggagcat cgtggcccga gcgccggggg
     5821 tctttctaga gaacgtgagc ccctacgtgg acttcaagga aatcgctctt tcgacgccgg
     5881 cgggcacggc gtggtcgtac aacgccggga aattcggatt gaacgaactc ctacgccgac
     5941 tgagcagcgg agaccgtccc cccacggcag cgctgcgcac cgaggcaaag gatctgatca
     6001 acgtggggat gagcaatctc cggccgaagg tatcagcgag tgaattcctc agcttgacta
     6061 cgcttgccac tgccgtgctc gcgaaacttt gatgggcctc gctctcagta gctcgcgcct
     6121 ggtaaagccg agtcagcgct cggtcgtctc ccgtgtgttc agctccaatc ccaaacgact
     6181 cattcggaga tgctcccatg ccgaaaaccg tccccccgat tcccaccggg agtcttcaga
     6241 tcact
//
LOCUS       DASYRV010000514         2346 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3017970, whole genome shotgun sequence.
ACCESSION   DASYRV010000514 DASYRV010000000
VERSION     DASYRV010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2346
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3017970"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..215
                     /locus_tag="VGQ24_13695"
     CDS             <1..215
                     /locus_tag="VGQ24_13695"
                     /inference="COORDINATES: protein motif:HMM:NF020683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="galactose oxidase early set domain-containing
                     protein"
                     /protein_id="HEV8455947.1"
                     /translation="ARIIRLTSTTHAFDEGQRLTTLSFVAAADGQSLTLTPPASGRKA
                     PPGPYMLFILNDKGVPSVAQTILLSQ"
     gene            302..949
                     /locus_tag="VGQ24_13700"
     CDS             302..949
                     /locus_tag="VGQ24_13700"
                     /inference="COORDINATES: protein motif:HMM:NF013786.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HEV8455948.1"
                     /translation="MRALQALEEALGPEELAKADQFRLGLNRNRYIVAHGVLRAILAR
                     YLETAPGELVFRYGPQGKPELATGEARFSMSHSDDLVLCAITCTCHVGVDIERVRPGV
                     DEDVARCFSPGAVRSLEGLPASARRRAFYQSWTRMEAYAKGCGEGLKSDLANFDGFLN
                     LSDPVLLPTLQSTGQTSRWWLHDFRPRRGYVGAIAAGQGRCRFKYWKWQAHEGEE"
     gene            946..>2346
                     /locus_tag="VGQ24_13705"
     CDS             946..>2346
                     /locus_tag="VGQ24_13705"
                     /inference="COORDINATES: protein motif:HMM:TIGR01733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid adenylation domain-containing
                     protein"
                     /protein_id="HEV8455949.1"
                     /translation="MKIFQTKRVASEVGLPDVRGACIPDLIAAQATKSPEALALTADA
                     QKLTYGELDRRATRLAHHLRSLGVGADVLVGLYLPRSLEMVIGALGILKAGGAYVPMD
                     PTYPPERLAFMLDDAQAPVLITSSHLAQRLPAARRELVYIDVPQIAGEPEYTQPVTIA
                     PADLAYVIYTSGSTGKPKGVEITHGSLTNLVSWHIEAFSVTAADRASHVAGLGFDATV
                     WELWPYLAAGASVHLADEDTRNSAELLREWLLAQRITIGFVPTPLAERLLTLGVEWPR
                     KSGPRILLTGGDTLHHYPPAGLPFLLVNNYGPTEGTVVATSGPVLPDGSPEMLPPIGT
                     AITNAQIYLLDEHLNPVPAGAPGQIYIGGAGLARGYRNRPDLTAEKFIPNPFSVEPAS
                     RLYKTGDLARQLPDGRIVFLGRTDDQVKIRGYRIEPSEIAGVLSRHQDIRASLVVARE
                     DTPGDKRLVAYLVLDSG"
BASE COUNT          435 a          755 c          728 g          428 t
ORIGIN      
        1 aggcgaggat cattcggctg acctcgacga cgcacgcctt cgacgaggga cagcggctca
       61 ccacgctgag cttcgtggca gcggcagacg ggcagagcct caccctgact cctccggcat
      121 ccgggcgtaa agctccacct ggaccctaca tgctctttat cctcaacgac aaaggggtcc
      181 cttcggtagc gcagacaatt ctgctgtcgc agtgagggag tgcacctgga actcgcctgc
      241 cggcccgctc gaattgaaaa gcggcgagat ccacctgtgg caggcggatt tggaccgtaa
      301 catgagggcc ctccaggctc tcgaggaggc gctggggccg gaagagctcg cgaaagccga
      361 ccagtttcgc ctggggctga accgtaaccg ttacatcgtc gcgcacgggg ttttaagagc
      421 gattctggcc cggtacctcg agacggctcc gggcgagctc gtgttccgat acggaccgca
      481 gggaaagccc gagctcgcca ctggggaagc acgcttcagt atgtctcact cggacgatct
      541 ggttctctgc gccatcactt gcacgtgcca cgtgggtgtc gatatcgaac gggtgcgccc
      601 gggagtcgat gaagacgtag cgcggtgctt ctcgccggga gcggtccgct ccctcgaagg
      661 actccctgca tccgcgcggc ggcgcgcttt ctaccagagc tggactcgaa tggaggccta
      721 tgccaagggg tgtggcgaag ggctcaagtc ggatctggcg aacttcgacg gcttcctgaa
      781 tctgagcgat ccggtcctcc tccccacgct ccagagtacc gggcaaacct cccgctggtg
      841 gctccatgac ttccgccccc gtagaggcta cgtcggcgca atcgcggcag ggcaggggag
      901 atgcaggttc aagtactgga agtggcaagc tcatgagggt gaagaatgaa gatctttcaa
      961 accaagcgcg tcgcttcgga ggtcggcctt ccggatgtac gaggcgcttg tatccctgat
     1021 ctcattgcgg cacaggcaac caagagcccc gaggcccttg ccctcacggc agacgcccag
     1081 aagctgacct acggtgagct ggatcgccgg gccactcgcc tggcccacca cctgcgctcg
     1141 ctcggcgtgg gtgcggacgt cctggtcggg ctgtatctgc cgcggtcatt ggaaatggtg
     1201 atcggggccc tcggaatctt gaaggcgggc ggcgcatatg ttccgatgga tcccacctat
     1261 cctcccgagc gcttggcttt catgctggat gatgctcagg cgcccgtgct gataaccagt
     1321 tcacatcttg cgcagcggct cccagccgcc aggcgagaac tggtatacat cgacgtcccg
     1381 cagatcgccg gagagcccga gtacacacag cccgtcacaa tcgcgcccgc tgacctggcg
     1441 tacgtcattt atacctccgg ctccactggc aaacccaagg gagtcgaaat tacgcacggt
     1501 agcctgacca atctcgtgtc ctggcacatc gaggcattct ccgtgactgc cgccgatcgg
     1561 gcaagccatg tagcgggcct gggcttcgac gcgactgtct gggagctctg gccttatctc
     1621 gcagccggag caagcgtcca tctggccgat gaggataccc gcaattcggc cgaacttctc
     1681 cgcgagtggc tgctcgccca gcggattacg attggattcg tgccgacccc gctggccgag
     1741 cgcctgctca ctcttggagt ggaatggccg cgaaagtctg gcccgcgaat cttgctgact
     1801 ggcggcgaca cgttgcacca ctatccgcct gcggggctgc cctttctgct ggtcaataat
     1861 tacggaccta ccgaggggac ggtggtggct acatcgggac cggtgctgcc cgacgggtcc
     1921 ccggaaatgc taccgcccat cggcaccgcc atcaccaatg cccagattta ccttctcgat
     1981 gaacacctga acccggtacc ggcaggcgca cccggccaga tctacatcgg aggtgccggt
     2041 ctcgcgcggg gctatcggaa ccgccccgac ctgaccgccg agaagttcat cccgaacccc
     2101 ttcagcgttg agccggccag caggctatac aaaaccggcg atctggcccg ccagctgccc
     2161 gatggccgga tcgtcttcct ggggcggacc gacgaccagg tcaagatccg cggctaccgg
     2221 atcgagccga gcgaaattgc gggcgtactt agccggcacc aggatatccg cgcgagcctg
     2281 gttgttgcgc gggaggacac tcctggggac aaacggctgg tcgcatatct cgtactggat
     2341 tcaggc
//
LOCUS       DASYRV010000515         3633 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3735307, whole genome shotgun sequence.
ACCESSION   DASYRV010000515 DASYRV010000000
VERSION     DASYRV010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3633
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3735307"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..592)
                     /locus_tag="VGQ24_13710"
     CDS             complement(<1..592)
                     /locus_tag="VGQ24_13710"
                     /inference="COORDINATES: protein motif:HMM:NF024739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEV8455950.1"
                     /translation="MLERAFENRRPDIDVRWLDMGSQEILDRLRFERVNPQADVWFGG
                     PASIFDRGIQDSVLAPYRPVWAGSVEHRGAGPGDLYYPVYRTPAVIAFNSRAVSRRDA
                     PHDWDDVLEPRWKDKVIIRDPMASGTMRAIWGLILLRSLRQTGDTAEGMAWLRRLDGQ
                     TKTYTISPALLYEKLARQEGLISLWDLQDILITQAKG"
     gene            complement(766..3513)
                     /locus_tag="VGQ24_13715"
     CDS             complement(766..3513)
                     /locus_tag="VGQ24_13715"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019213 - deacetylase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HEV8455951.1"
                     /translation="MRRGLLSIGPAFLLLCVLSTSSLLGQLEPPSTGGAVALDQEIRM
                     LGHYKRVLMIGAHPDDEDTELLTILVRGLGAEAAYLSLNRGEGGQNLIGPELGEALGL
                     IRTEELLAARRLDGARQYFTRAYDFGYSKTLDETWQHWPRDTILKDVIRIVRRFRPQI
                     IVSIFSGTPRDGHGQHQAAGWSAQEAFRAAGDSTRFRELFREEGLLPWSPLKLYRSTR
                     FDSAATTLTLNGGVLDPAIGKSFHQIAMAGRSLHRSQDMGQLQRIGPSNVRLALVEDR
                     TAAGGDPKGGLFSGIDTSMAAIPLGERRAGGSATLVLAGDPTAGLTRYQVRIDSIIAA
                     RGNLSRQRGLLARAASELERAVAEPPREGAGGGGVYYTRGIELEDQLGHLNAAAWHLG
                     RVVFDAILDDDRVVAGQQLRWTLSTWNASDEPRLADMRAAECIPLGECQGPEPDSVPL
                     TIQPGQVGTVAAEYQVLEQPPSTPYFLSLPRAGDLYRWPDQRQDRLSLTGGPPYGEPF
                     EPATFLGSVEVNAGQRDSLGASRLTEAVFRFNDQARGEVRRPVTVVPRIDVKLDPATE
                     VWPTASLRPHRFTVTLTHGAKDSTSGTVHLQLPRGWPAVARQHFHFAREDERESFVFE
                     VRPPARLTPDSGQIRAVAQDLEGTTYDVGVYTVDYSHIRPRSYTRLATATLRVAPLIV
                     PRLARVGYVRGAADQVPEALSSVGVPVTPLGAAALERGRLDRYDAIVIGPRAYETNST
                     LVENNRRLLDYTRRGGLLIVQYQQHQFFSGRFAPYPMTVGGQPLRLEESAPARPGSAP
                     SRAAPPISHDRVTDENAPVRLVAPDHPAVSAPNRLSAADWKGWVQERGLYFARTWDKR
                     YRPILETHDPGETPLLGGLLVAPFGKGAYVYTGLSFFRQLPAGVPGAFRLFANLLALR
                     K"
BASE COUNT          634 a         1197 c         1224 g          578 t
ORIGIN      
        1 tgcccttggc ctgggtgatc aggatgtcct gaagatccca gagacttatc agtccctcct
       61 gacgggcaag cttctcgtac aacagcgcag ggctgatggt ataggtcttg gtttggccgt
      121 ccagccgccg aagccaggcc ataccttcgg ccgtgtcccc ggtttgacgc aggctgcgca
      181 gcaggatcag tccccagatg gcgcgcatcg ttccgctggc catgggatcc cggatgatga
      241 ccttgtcttt ccagcgtggc tccagcacgt cgtcccagtc gtggggtgcg tcccggcggg
      301 acacggcgcg gctgttgaag gcgatcaccg ccggcgtccg gtagactgga tagtagagat
      361 ccccggggcc ggccccgcga tgctccacac tgccggccca caccggacgg tagggcgcca
      421 gcaccgagtc ctggatcccg cgatcgaaga tcgaggccgg accgccgaac cagacatcgg
      481 cctgcggatt gacccgctcg aaacgcaacc ggtcgaggat ctcctgcgag cccatgtcga
      541 gccagcgcac atcgatgtct gggcggcggt tctcgaacgc acgctccagc aaggcgagct
      601 gatctcgtcc atgcggggag tataggacaa tcggggttcg atcgtctgcg gtgcaggcgg
      661 agaagacgga gaggacggag aagccggaaa gaacggagaa gacggaaaag gcggcgctgg
      721 aaagcgacct acgtccgcct cgctccgtcc tctccgtcct ctccgtcact ttctgagcgc
      781 gagaagattc gcgaacagcc gaaacgcgcc tggcacgccg gcgggcagct ggcggaaaaa
      841 gctcaggccg gtgtagacat aggctccctt cccgaacggg gccaccagaa gcccgccgag
      901 aagcggtgtt tcgccggggt cgtgagtctc gagaatcggt cggtagcgct tatcccaggt
      961 ccgggcgaag tagagcccac gctcctggac ccaacccttc cagtccgctg cactcagccg
     1021 gttgggcgcg ctaaccgcgg gatgatccgg tgcgaccaga cgcaccggcg cgttctcatc
     1081 ggtgacccgg tcgtgactga tgggcggagc agcgcgtgag ggcgcggacc ccggccgggc
     1141 cggcgccgac tcctccaggc gcaacggctg ccccccgacc gtcatcgggt agggagcaaa
     1201 ccggccgctg aaaaattggt gctgctgata ctgcacgatg aggagaccgc ctcgccgggt
     1261 atagtcgaga aggcgccggt tgttctccac cagtgtcgaa ttcgtctcgt aggcacgcgg
     1321 cccgatcacg atggcgtcgt acctatcgag cctcccgcgc tcgagcgccg ctgcgccgag
     1381 cggcgtgacg ggtactccca cgctggagag cgcctcgggt acctggtcgg ccgcgccacg
     1441 aacgtagccg acccgagcga gccggggcac gatcagaggc gctacacgaa gcgtggccgt
     1501 cgccagcctg gtgtacgagc ggggcctgat gtgagagtag tcgacggtat acacccctac
     1561 gtcgtacgtg gtaccctcca ggtcctgtgc caccgcgcga atctggccac tatcgggagt
     1621 gaggcgagcg ggcggtctta cctcgaagac gaagctttcg cgctcgtcct cccgggcgaa
     1681 gtggaagtgc tgccgtgcta ctgcgggcca gccgcgaggg agttgcaggt gcacggtgcc
     1741 ggacgtggag tccttggcac cgtgggtgag ggtgacggtg aagcggtgcg gcctgagcga
     1801 ggcggtcggc cacacctcgg tggccggatc gagcttcaca tcgatgcgcg gtaccacggt
     1861 gaccggccgg cgcacctctc cccgcgcctg atcgttgaat cgaaacaccg cttcggtcag
     1921 ccgcgaggcg cccaggctgt ccctttgtcc ggcattcacc tcgaccgatc ccagaaaggt
     1981 ggcaggctcg aagggttccc cgtagggcgg gccgccggtg agactcagtc ggtcctggcg
     2041 ctggtccggc cagcgataga gatccccagc tcgcggcaag ctcaggaaat acggagtgga
     2101 gggcggctgc tcgagcacct gatactcggc cgcgaccgtc ccgacctgcc ctggctggat
     2161 ggtcagcggc acggagtccg gctccggccc ctgacactct ccaagtggaa tgcactccgc
     2221 cgcccgcatg tctgccaggc gtggctcatc cgaggcgttc caggtggaca gagtccagcg
     2281 aagctgctgt cctgcgacga cccggtcgtc atccaggatg gcatcaaaca cgacccggcc
     2341 cagatgccag gcggctgcgt tgaggtgccc cagctggtcc tccaattcga tgccgcgagt
     2401 gtagtagacc cctccacctc ccgcgccctc tcgaggcggc tccgccacgg cgcgttcgag
     2461 ctcggacgcg gcccgagcga gcaggccgcg ctggcgcgac aggttaccac gcgcggcaat
     2521 gatcgagtcg atccggactt ggtacctcgt gagaccggca gtcgggtcgc cggcgagaac
     2581 gagcgtggcc gagccacccg cacgccgctc gcccagggga atggccgcca tgctggtatc
     2641 gatcccggag aacaagccgc ctttcgggtc gcctcccgca gccgtgcggt cttccaccag
     2701 ggccagccgt acgttcgagg ggccgatgcg ctgcaactga cccatgtcct gggatcggtg
     2761 caggctccgt ccggccatgg cgatctgatg gaacgacttg ccgatggccg ggtcgagcac
     2821 cccgccattc aaggtcaacg tggtggcggc gctgtcgaac cgggtgctcc gatacagctt
     2881 gagcggactc cacggaagga gaccctcctc ccggaatagc tcccgaaacc gggtagagtc
     2941 cccggccgcg cggaacgcct cctgggccga ccagccggcg gcctgatgct gtccgtgccc
     3001 gtcacggggc gttccactga agatcgaaac gatgatttga gggcggaacc tgcggacgat
     3061 cctgattacg tccttcagga tggtatcccg gggccagtgc tgccacgtct catccagagt
     3121 cttggagtag ccgaaatcgt aggcccgggt gaaatactgc cgcgcgccgt cgaggcggcg
     3181 cgcggcaagt agctcttcgg tccggatcag cccgagcgct tctcccagct cgggaccgat
     3241 cagattctgc ccgccctcgc cccgattcag tgagagatag gccgcctccg cgcccaggcc
     3301 gcggacgagg atggtcagca gctccgtatc ctcgtcgtcg ggatgggccc cgatcatcag
     3361 gacccgcttg tagtgcccca gcattcgaat ctcctggtcg agcgcgaccg ctccgcccgt
     3421 ggacggtggc tcgagctgcc ccagaagcga ggatgtcgaa aggacgcaca acaggaggaa
     3481 cgcgggaccg atggagagca atccgcgacg cacagacccc ggccgtagga gttgaggctg
     3541 gaaggtaact cggtaacggg gccctacgaa atcacggagc gtccccgagc ggggtctccc
     3601 ggcaagcgcg gcggacctcg gggtgcttgt acc
//
LOCUS       DASYRV010000516         4015 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3735470, whole genome shotgun sequence.
ACCESSION   DASYRV010000516 DASYRV010000000
VERSION     DASYRV010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4015
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3735470"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..317
                     /locus_tag="VGQ24_13720"
     CDS             <1..317
                     /locus_tag="VGQ24_13720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEV8455952.1"
                     /translation="YRCQYCHRGQGELRHRECLTRDHLIPLSRGGDNEWANVVTACSS
                     CNTRKGNLLPQECGMHPIVAPHEPHFVHLSWAVRRLSATQAKYIKLFYGDEALRALGG
                     TV"
     gene            complement(329..970)
                     /locus_tag="VGQ24_13725"
     CDS             complement(329..970)
                     /locus_tag="VGQ24_13725"
                     /inference="COORDINATES: protein motif:HMM:NF025692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HEV8455953.1"
                     /translation="MAGVTLAAAPLQRLDAQEAQPVRLYVALSPDSSQNGARAPIVRS
                     ANLLGGDSRWLAALRSGLPVRLHYRVEVWRSRDGWFDIFVRQAEWDVLVRHEPLLDQY
                     TLLTFAGASRQERRYATLDALGAALAFAYQVNVRPAEEGRYYYAASLQVSTLSDSDLD
                     ELERFLAGDLRREARDGENLGDALGRGATRFLLRLAGLPSLRLEARSERLVVR"
     gene            complement(1024..2757)
                     /locus_tag="VGQ24_13730"
     CDS             complement(1024..2757)
                     /locus_tag="VGQ24_13730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455954.1"
                     /translation="MRLLVAGLMLALAAPLRAQDSVIVIDPNAPPSDSVVRGGPPPGV
                     VADLIQLYNDSATTRMQGDVTLPAGSRFEGKLALYRGSLRIAGRVVGPVAVANGTLYL
                     LPGAAVEGEILVVGGRLIRSEQVSHFGPQRVYWDAAPVVRNADGLLVLRERRRALGDI
                     ATARTTFQAGRIRTTLSLTTGGTYNRIEGLPVLFGPLFEFRPTSHTLARLDLRGILRT
                     AGESANLRSDFGYVVRADLRFQGKAEFGIGGQLYNEVASIEDQPLAASESGWSAFLLQ
                     RDYKDYFEREGVSGMAYVQPARALRIELSLSRDAERSVRATDPWSLFRNSDRWRRNPL
                     VDDGHYFITGVQVDYDTRNERDRPTTGWMIRTRYEHLTSDDIAPVALPPVVRPNPPSG
                     GGYGTDRLLIDVRRYSRLTPGLLVNGRLRADGWLAGGRLPVQRRVSLGGPDLLPGFDF
                     RAYTCAPRGFSDPAMPALCDRSIVGQVEVRTRLGLNLGYRLPDREGRGAGRFLGIEEA
                     DLVFFTDLGKAWLAGSGPGQVPVARIPALKEWALDLGVGLDAGEIAAYVAKSLSKGEP
                     VKFVVRLQRRF"
     gene            complement(2780..>4015)
                     /locus_tag="VGQ24_13735"
     CDS             complement(2780..>4015)
                     /locus_tag="VGQ24_13735"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEV8455955.1"
                     /translation="PDVVLLDLMMPPGPDGLETLTRMRDRGSTAPVIMMSGKAQLTDA
                     VRAVKLGAFQFLEKPLTLEAVLVTVRSALELNRTQAENRALHAELARRGTLIGSGPAM
                     QQVRALIARVAPTEARVLITGESGTGKELVAAAIHEESRRKGRPFVTVNCAAIPRDLV
                     ESEMFGHERGSFTGASERRIGRFELAHGGTLFLDEVGDLSQEAQAKLLRTLETGELQR
                     IGAETVTHIDARVVAATNRRLDDAVSNGGFREDLFFRLNVFPIHLPPLRQRLEDLPAL
                     VAHLAERVRPRHAATFTEAALETLVSYSWPGNIRELANLVERLSILSGPVVDAPAVRQ
                     VLRGPSSSPPSAGSPPVQLGRPLNEALDEFERSFIGAALAQAEGNMAEAARILQTDRA
                     NLYRRMRRLGLEKSADVES"
BASE COUNT          702 a         1361 c         1331 g          621 t
ORIGIN      
        1 gctatcggtg ccagtactgt caccgtgggc agggggagct tcgccaccgt gagtgtctga
       61 cccgggatca cctgatcccg ctctcgcgtg ggggagacaa cgagtgggcc aacgtggtga
      121 cggcctgcag ctcctgcaat acgcggaagg gcaacttgct cccccaggaa tgcggcatgc
      181 atcccattgt cgctccgcac gaaccgcact tcgtccatct ctcctgggcg gtgcgacggc
      241 tctccgctac ccaggccaag tacatcaagt tgttctacgg agacgaggcg ctgcgcgcct
      301 tgggcggcac ggtatagaga gcagcgatct agcgcaccac caaccgctcg ctccttgcct
      361 ccaaccgtag actcggcagt cccgccagac ggagtaaaaa ccgagtcgct ccccgtccca
      421 acgcatcgcc cagattctcg ccatctctgg cctcccgccg caggtctcca gccaggaacc
      481 gttccagctc gtcgagatcg gaatcggaga gggtggacac ctggagcgag gccgcatagt
      541 agtagcggcc ctcctcggcc ggacgcacgt ttacctggta agcaaaggcg agtgccgctc
      601 ccaaggcatc gagcgtcgcg tagcggcgtt cctgccgcga agcgccggca aaggtgagca
      661 gggtgtactg gtccagcagc ggttcatgcc gcacgagtac gtcccactcc gcctgccgaa
      721 caaagatgtc gaaccaccca tcgcgcgagc gccacacctc cacccgatag tgcagacgca
      781 ccggtagacc cgaccgcagc gcggcgagcc agcgactatc gccgccgaga aggttcgcgg
      841 agcgcacgat gggagcgcgg gctccgttct gactcgagtc aggcgacagc gcgacgtaca
      901 gccggaccgg ttgggcctcc tgggcatcga gccgctgaag cggcgccgct gcaagggtga
      961 cgccggccac cagccgccag gcaccccgac agctatggag gagggaacgc cgccgcgatg
     1021 acactagaag cgacgctgta acctgaccac gaacttgacc ggctcaccct tcgacaggct
     1081 cttggcgaca taggcggcga tttctccggc atcgagtccc acgccgagat cgagcgccca
     1141 ctccttgagt gccggtatcc gggcgacggg cacctgcccc ggtccgctgc ccgccagcca
     1201 ggccttcccc aggtcggtga agaacacgag atccgcctcc tcgatcccga ggaaccgtcc
     1261 ggctccgcgg ccctctctgt cgggcaagcg gtagcccagg ttgagcccta accgggtccg
     1321 cacctcgacc tggccgacga tagagcgatc gcacagtgct ggcatggcgg gatcgctaaa
     1381 cccccgtggt gcgcaggtgt aggcgcggaa gtcgaagccg gggagcaggt cgggacctcc
     1441 gagcgacact cggcgctgga ccggaagccg gccgcctgcc agccatccat cggcccggag
     1501 tctcccgttg accagcaggc cgggcgtgag ccgggaatag cggcgaacgt cgatcaggag
     1561 ccggtcggtc ccgtatccgc cgccgctcgg ggggtttggg cggaccactg gaggcagcgc
     1621 caccggtgcg atatcgtcac tagtgaggtg ctcgtagcga gtgcgaatca tccagccggt
     1681 cgttggccgg tcgcgctcat tgcgggtgtc gtagtcgact tggacgccgg tgatgaagta
     1741 gtggccatca tccactagtg gattgcgccg ccaccggtca ctgttccgga agagggacca
     1801 tgggtcggtg gcgcgcacgg agcgctccgc atcgcggctc agcgagagct cgatgcgcag
     1861 cgcgcgggcg ggctgcacgt aggccatccc gctgacgccc tcacgctcga agtagtcttt
     1921 atagtcgcgc tggagcagga acgccgacca gcccgactca ctggccgcga ggggctgatc
     1981 ctcgatcgac gccacttcgt tgtagagctg gccgccgatt ccgaattcgg ctttgccctg
     2041 gaagcggaga tcggcccgga cgacgtaccc gaaatcgctg cggagattcg cgctctcgcc
     2101 agccgtgcgg aggatcccgc gcaggtcgag ccgggccagt gtgtgcgagg tggggcgaaa
     2161 ctcgaacagc ggcccgaaga gaaccggcag tccctcgatc cggttgtagg tgccgcccgt
     2221 ggtgagcgag agggtcgttc gaatacgtcc ggcctgaaag gtggtccgtg cagtcgcgat
     2281 gtcgcccaga gcacggcggc gctcccgcag cacgagcaaa ccgtcggcgt tccgaacaac
     2341 cggggcagca tcccagtaca cccgctgcgg cccgaaatgg ctgacctgct cggatcggat
     2401 caggcggcca ccaaccacga ggatctcgcc ttccaccgca gcacccggca ggagatacag
     2461 cgtgccgttg gccacggcga ccggcccgac tacccgaccg gctatccgaa gcgacccacg
     2521 atacagcgcc agcttgccct cgaaccggct gccggccggg agagtcacat caccctgcat
     2581 gcgcgtcgtt gccgagtcgt tgtagagctg gatcaggtcc gcgacgacac ccggcggcgg
     2641 tcctccccgc accaccgaat cgctcggcgg tgcgttggga tcgatcacga tcacgctgtc
     2701 ctgggcccgc aagggcgcgg cgagtgccag catcaggccg gcaacgagca gtcgcatgag
     2761 ggtctcgagc aaatgtgggt tatgactcaa cgtccgcgct cttctccaga cccagccggc
     2821 gcatgcgccg atagagattg gctcgatcgg tctggaggat gcgggcggct tcggccatgt
     2881 tgccttcggc ctgcgccagc gcggccccga tgaagctccg ctcgaattca tcgagcgcct
     2941 cattcagggg ccggccaagc tgaaccgggg gagagcccgc cgatggcggg gaagacgagg
     3001 ggccgcgcaa cacctgccgg accgccggtg catccactac ggggccgctc agaatgctga
     3061 gccgctcgac caggttggcc agctcgcgaa tgttccccgg ccaggagtag gaaaccagcg
     3121 tctcgagcgc cgcctcggtg aaggtggccg cgtgacgggg tcgcacccgc tcggccagat
     3181 gagccaccag ggccggcaga tcttcaaggc gctggcggag cggaggcagg tggatcggaa
     3241 agacgttcag acggaagaaa agatcctcgc ggaagccccc attgctcacc gcatcgtcga
     3301 gccgccggtt ggtggcggca accaccctgg cgtcgatatg cgtgacggtc tcggcgccaa
     3361 tgcgctggag ctctcccgtc tcgagggtgc gcagcagctt ggcctgcgcc tcctggctca
     3421 gatctccgac ttcatcgaga aagagcgtgc ctccgtgggc gagctcgaat cggccgatcc
     3481 gccgctcgct ggctccggta aacgacccgc gctcgtgacc gaacatttcg gattcaacca
     3541 ggtcgcgggg gatggccgca cagtttaccg tgacgaaggg gcgtcccttt cgccgacttt
     3601 cctcgtggat ggcggctgcg accagctcct tgccggtgcc ggattcgccg gtgatgagca
     3661 cgcgggcctc ggtgggagca acccgagcga tcagcgcccg tacctgctgc atggctgggc
     3721 cgctgccgat gagggtcccc cggcgggcca gctcggcgtg cagcgcccgg ttctcggcct
     3781 gggtccggtt gagctccagg gcggaccgta cggtgaccag caccgcctcg agggtgagcg
     3841 gcttctccag aaactggaag gcgcccagct tcaccgcccg aacggcatcg gtcagctgcg
     3901 cttttccact catcatgatg accggcgccg tgcttccccg gtcgcgcatt cgcgtcaggg
     3961 tctcgagccc atccggcccc ggcggcatca tcagatccag cagcaccacg tcggg
//
LOCUS       DASYRV010000517         4110 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1149425, whole genome shotgun sequence.
ACCESSION   DASYRV010000517 DASYRV010000000
VERSION     DASYRV010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4110
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1149425"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..430)
                     /locus_tag="VGQ24_13740"
     CDS             complement(<1..430)
                     /locus_tag="VGQ24_13740"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEV8455956.1"
                     /translation="MAETAAGTKATDLLLEAREAIDTLLGDWSERLGAEIGGREGQAL
                     AYALRTPGKRVRAALLIAGYRAVGGHSPGIAGIAAAVETVHAYSLVHDDLPCMDNDDL
                     RRGRPTTHRAFDVASATRAGYLLVPVAARLLAVGAAELDLS"
     gene            complement(423..668)
                     /gene="xseB"
                     /locus_tag="VGQ24_13745"
     CDS             complement(423..668)
                     /gene="xseB"
                     /locus_tag="VGQ24_13745"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR01280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEV8455957.1"
                     /translation="MPKPNVVPAEPSSLADELARLEEIVRKLEADDVELDTALALFEE
                     GVARLRSARERLVDAELKVQAVLEAADGDVRLTDIDG"
     gene            complement(672..1775)
                     /gene="xseA"
                     /locus_tag="VGQ24_13750"
     CDS             complement(672..1775)
                     /gene="xseA"
                     /locus_tag="VGQ24_13750"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEV8455958.1"
                     /translation="MSVGQLSSVVKQLIDGSFMPVWVRGEVVQCRVWSSGHWYFTLRD
                     KRSQVKCCLWKLNAARAGKPPADGTEVFVLGKPGLYEEKGEFQFIVQRIIPTAAVGRQ
                     QQELERVKAALQKDGLFEPGRKRRLPAYACIVALVTSPDGAAIHDVVTVTRKRWPCAQ
                     ILVVGARVQGDGAVQELVRALGLVNRIPGLDVCIVGRGGGGREDLAAFNSEAVCRALA
                     AVRVPTISAVGHETDISLTDLVADIRAATPSAAAELALADRRDVLRLVDDLSLRLAAG
                     LSGRTRLASERLARTGDRLQAGIETVLESRRNLADRLGAQLDALSPLKVLGRGYAVPV
                     ASDGRVLKRRADFVTDQRFHLRVSDGDVRARVE"
     gene            complement(1948..2835)
                     /gene="folD"
                     /locus_tag="VGQ24_13755"
     CDS             complement(1948..2835)
                     /gene="folD"
                     /locus_tag="VGQ24_13755"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEV8455959.1"
                     /translation="MSARILDGTAVAKAIRQEVAAEVSRLRSRGRKPGLAAVLVGEDP
                     ASAVYVRAKGKACEEAGMHSVTVRLPAETPEPDLLATVDGLNADPEINGILVQLPLPK
                     HINSEKVLRRIDPSKDVDGFHPVNVGKLVTGDKTAFRPATPYGVQQMLIRSGIETKGA
                     HAVIVGRSNIVGRPMANLLIQHGPGGDATVTVCHSRTRDLPSVTRLADILIAAIGKPE
                     FVTADMVRPGAVVIDVGINRVDDASRPKGYRLVGDVAYDSVAQIASAITPVPGGVGPM
                     TIAMLLQNTLQAMQQADLD"
     gene            complement(2832..>4110)
                     /gene="rny"
                     /locus_tag="VGQ24_13760"
     CDS             complement(2832..>4110)
                     /gene="rny"
                     /locus_tag="VGQ24_13760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HEV8455960.1"
                     /translation="RVQERKLEELEARERNALHREEDLNQREQGLRSREGEADRLAQE
                     QRLKLERIAGLTAEDARREILQRIEDEARGQAAALVRDIKEQARRTADRDARRIISMA
                     IQRLGAEHTAESTVAAVALPSDEMKGRIIGREGRNIRAFETATGVDVIIDDTPDTVII
                     SCFDPIRREVARRSLEALITDGRIHPGRIEEVVLKIQRELDAQLIELGEQAAYDTGVH
                     GLHPEIIKLVGRMRYRTSYGQNILEHSKEVAWLAGMMASELHVDVALAKRGALLHDIG
                     KVLTHDNEGTHVELGVEVARKYGESGAVINCIQAHHDDVPHESTESVLVQAADAISGS
                     RPGARREAFESYVKRLTRLEEIANGFAGVEKSNVIQAGREIRVVVTPDRIDDGAAAQL
                     SESIARKIESELQYPGQIKVVVIRETRAVDFAR"
BASE COUNT          662 a         1422 c         1299 g          727 t
ORIGIN      
        1 aggaaagatc cagttccgcg gctccgaccg cgagcagccg ggcagcaacc ggcacaagca
       61 ggtagccggc tcgtgtggcg gaggcaacgt cgaaggcccg gtgggtggtg ggacggccgc
      121 gacggagatc gtcgttgtcc atgcatggca ggtcatcgtg cactagcgag taggcgtgca
      181 ccgtttcgac tgcggcggca ataccggcga tccccgggga gtggcctcca accgcccgat
      241 agcccgcgat cagcagcgcg gcgcgcaccc gctttcccgg cgttcggagc gcgtaggcca
      301 gcgcctggcc ctcgcggccc ccgatctcgg cgccaaggcg ctccgaccag tcgcccagga
      361 gcgtgtcgat cgcctctcgt gcttccaaca gcaggtccgt cgccttcgtg ccggcggccg
      421 tttcagccat cgatgtcggt cagtcggacg tcgccgtcgg cggcctcgag aacggcctgg
      481 accttgagct cggcgtctac gaggcgttcc cgcgccgacc ggagccgggc aacaccttct
      541 tcgaacagcg cgagcgcggt gtccagctct acgtcatccg cctcgagctt gcgcacgatc
      601 tcttccagtc gggcgagctc atcggccaag gaggacggtt ccgcgggcac tacattcggc
      661 ttgggcacat ctcactccac ccgggcgcga acatcgccat cgctcacccg caaatgaaac
      721 ctctggtcgg tgacgaagtc ggctcgacgc ttgagcaccc ggccgtcaga cgccaccggc
      781 acagcgtagc cgcggcccaa caccttgagc gggctcagtg cgtccagctg ggcaccgagt
      841 cggtcggcca agttgcggcg ggattcgagc acggtttcga tgcccgcttg aagccggtcg
      901 ccggtgcggg ctaaccgctc ggaggcgagc cgggttcggc cgctgaggcc cgctgccagg
      961 cgaagcgaga ggtcgtccac cagccgcagc acgtcacgcc ggtccgccag cgcgagctcc
     1021 gccgccgcgg acggtgtcgc cgcgcgaatg tcggccacaa gatcggtgag cgagatgtcg
     1081 gtctcatgcc ctaccgccga gatggtgggc acccgcacgg ccgcgagagc ccggcacacg
     1141 gcttcgctgt tgaacgcggc cagatcctca cgtcccccgc caccccgccc gacgatgcag
     1201 acgtcgagcc cggggatccg gttcaccagc ccgagcgccc gcaccagctc ctgcacggcg
     1261 ccgtcgccct ggacccgggc gcctacgacc agaatttggg cgcagggcca tcgctttcgg
     1321 gtgacagtga cgacgtcatg gatcgccgca ccgtccgggc tggtgaccag tgccacgatg
     1381 caggcatagg ccggcagtct tctcttccgg ccgggctcga atagcccatc cttctgcagc
     1441 gccgccttga cccgctccag ctcctgttgc tgccggccta cggccgcggt cggaatgatg
     1501 cgctgaacga taaactggaa ttcgcccttc tcttcgtaga ggccgggctt gccgagcacg
     1561 aacacctcgg tgccgtcggc cggcggcttg cccgcccggg cggcgttcag cttccagagg
     1621 cagcatttca cctgactgcg cttgtcgcgg agcgtgaagt accagtgtcc gctcgaccag
     1681 accctgcact gcaccacctc accccgcacc cagaccggca tgaaggagcc atcgatcagc
     1741 tgtttgacta cgctgctgag ctggccgacg gacaagacct gatccgttag agagggaatg
     1801 ctaaaggaca gcgacaaggt catattggga ctataaatag aagcttagac aaaacttgag
     1861 cacgaaagca cgaaaggaag catcacataa gcacaaaaca acgtgtttca aatctaagtt
     1921 cgtgttttcg tgttttcgtg attgttgtta atcaaggtcg gcctgctgca tggcctgtaa
     1981 ggtgttctgg agcagcatgg caatggtcat cggtcccacg ccgccaggta ccggcgtaat
     2041 cgccgaggcg atctgcgcca ccgagtcgta ggcgacgtcc ccgaccaggc ggtacccctt
     2101 gggccgggag gcatcgtcca cccggttgat tccgacatcg atcacgacgg caccgggacg
     2161 caccatatct gcggtcacaa actcgggttt gccgatcgcc gcgatgagga tgtcggccag
     2221 gcgggtgacc gacggcaggt cgcgagtacg cgaatggcag accgtcacgg tcgcgtcgcc
     2281 gccgggaccg tgctggatca gcaggttggc catgggccga ccgacgatgt tggagcggcc
     2341 gacgatgacc gcatgggcgc ccttggtctc gatgccggag cggatgagca tctgctgcac
     2401 gccatagggt gtcgccggcc gaaaggcggt tttgtcgccc gtcaccagct tgcccacatt
     2461 gaccggatga aatccgtcca cgtccttcga tgggtcgatg cggcggagga ccttctcgct
     2521 gttgatgtgc ttgggcagcg ggagctgcac caggatcccg ttgatctcgg ggtcggcatt
     2581 gaggccatcc acggtcgcca ggaggtcggg ttcgggcgtt tccgccggga gccgtaccgt
     2641 gaccgagtgc atccccgctt cctcgcaggc ctttcccttt gcgcgaacgt agaccgcgct
     2701 cgccgggtcc tctccgacca ggaccgccgc gagacctggt ttgcgtcccc ttgagcggag
     2761 gcgagacacc tctgccgcga cctcctggcg gatagccttc gcgacggcgg tgccgtcgag
     2821 gattctggcg ctcatcgggc gaagtccacg gcccgggtct cccggatcac gaccaccttg
     2881 atctggccgg gatactggag ctcgctctcg atcttccggg cgatcgactc ggacagttgc
     2941 gccgctgcgc cgtcatcgat ccggtccggc gtcaccacca cccggatctc ccgacccgcc
     3001 tgaatcacgt tgctcttctc caccccggcg aatccgttcg cgatctcctc cagccgggtc
     3061 agccgcttca cgtagctctc gaacgcctct cgcctggcac cagggcggga cccgctgatc
     3121 gcgtccgccg cctggaccaa caccgactcg gtggattcat gagggacatc gtcgtgatgg
     3181 gcctgaatgc agttgatcac cgccccactc tcgccgtact tccgcgccac ctccacgccg
     3241 agctccacgt gggtgccctc gttgtcatgg gtgagcacct tgccgatgtc gtgcaggagt
     3301 gcgcctcgct tggccagcgc cacatccacg tggagctcgg acgccatcat ccccgcgagc
     3361 cacgccactt ccttggaatg ctccaggatg ttctgcccgt aggaggtccg gtaccgcatc
     3421 cggcccacca gcttgatgat ctccggatgc agaccgtgca caccggtatc gtaggcggcc
     3481 tgctctccca gctcgatcag ctgggcgtcg agctcccgct gaatcttgag gacgacctcc
     3541 tcgattcgcc cggggtggat gcgaccgtcg gtgatgaggg cttcgagaga acggcgggcg
     3601 acttcccggc ggatcgggtc gaaacaggaa atgatcactg tatccggagt gtcatcgatg
     3661 atcacgtcca ctccggtggc ggtctcgaat gcccgaatgt tccgcccctc ccgcccgatg
     3721 atccggcctt tcatctcgtc gctcggcaag gccactgctg cgaccgtgct ctccgcggta
     3781 tgctctgcgc caagccgctg gatggccatg gagatgatcc gccgggcgtc gcgatccgcg
     3841 gtgcggcggg cctgctcctt gatgtcacgc accaacgccg cggcctggcc ccgcgcctcg
     3901 tcctcgatcc gctggaggat ctcgcgccgg gcatcttccg cggtgaggcc ggcaattcgc
     3961 tccagcttca ggcgctgctc ctgcgcgagg cgatcggcct cgccctcacg gctgcggagg
     4021 ccctgctccc gctggttcag gtcctcctcg cggtgcagcg cattccgctc acgggcctcg
     4081 agctcctcca gcttccgctc ctgaacccgg
//
LOCUS       DASYRV010000518         4687 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2604372, whole genome shotgun sequence.
ACCESSION   DASYRV010000518 DASYRV010000000
VERSION     DASYRV010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4687
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2604372"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            35..124
                     /locus_tag="VGQ24_13765"
     tRNA            35..124
                     /locus_tag="VGQ24_13765"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:69..71,aa:Ser,seq:gct)
     gene            213..1655
                     /gene="gltX"
                     /locus_tag="VGQ24_13770"
     CDS             213..1655
                     /gene="gltX"
                     /locus_tag="VGQ24_13770"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: protein motif:HMM:TIGR00464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEV8455961.1"
                     /translation="MIPPRVRFAPSPTGYLHVGGARTALFNWLYARHTGGTHVLRIED
                     TDRERSTEEHTRVILDGLTWLGIAWDEGPYFQGEYAARHQADAERLLMEGKAYRCFCT
                     REELDAQRARAEATGAGFRYDRRCRALTPSQVEERVQRGAPSTIRFIMDDGEIAWNDA
                     VHGPISFQGRDLDDFVILRSDNSAIYNLAVVSDDIGMRISHVIRGDDHISNTPKQIAL
                     YRALDHEPPVFAHVPMILGSDGKKLSKRHGATAVGDYQEQGILPAAMRNFLALLGWSP
                     GGDREILAEDEMIRLFTLEGIQKKAAVFDTTKLEWMNGQYLSALPVEELLEPVRRQLE
                     RMGVQAASDLRPLIDSVKARSRTILHVAEQVAVRLDPARSTLDGKGEALIRKMGPAFA
                     ENLQMASSALAALGPDEWNADRLVATLKAVAETHGLKLGDVMQPVRVALTGSTVSEPV
                     NELLAVVGRDRSLRRLDEVARKWNGGVSAA"
     gene            1652..2893
                     /locus_tag="VGQ24_13775"
     CDS             1652..2893
                     /locus_tag="VGQ24_13775"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEV8455962.1"
                     /translation="MRSSLQWLVIAAAAGCAKAPPPPQPRPVPAAERTDTLELPPSPL
                     LEPTPPPRLYTPVRLAFVGDINLGTATLPDGIPPDSGRGLLDPARPSLSGDLVVGNFE
                     GVLADTGTSTKCLITKPRTVKRRKPTKPRTAEVPAVRPNCYAFRTPIGLAPRLVEAGF
                     THLNLANNHSNDLGWLGRQTTERTLDSLGIKLYGPVGRISVDTVRRGDSLTTVGLIGF
                     TTYPFAYNLLDIEESAALVDSVRSLVDLLIVTFHGGAEGVRALRTGEAAESLGAEPRG
                     DLRRWARAVIDAGADAVIGHGPHVLRGMEFYRGRLIAYSLGNFLTYRGFNLAGPLGIT
                     GVLRLEFAEDRTLRRARLVPMVQLPRSGPAPDPGGAAIQLVRSLSTEDFGPTAAQISP
                     AGEITPPPSAAGDKGEVRGEK"
     gene            complement(3026..3853)
                     /locus_tag="VGQ24_13780"
     CDS             complement(3026..3853)
                     /locus_tag="VGQ24_13780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455963.1"
                     /translation="MASVVAHSVLLFGWVTGRLPSVPPLPRQLIVLSEPAQGREQVSM
                     RYDLPQAVGERRARPLPPVRSARSERRASTPELPDRQAVPALPEPVRPVPPPADTGGA
                     APQQQVPLGRIGPGLALGRLWVRPLPLPPRELAQRLTKSRAQLVDSAVTVIVQQYLDS
                     IANDPASKNQGLPSWTTEIAGKKFGLDSKNIYIAGLKIPAAVLALLPIPAGNIDQNRA
                     YNHLMDLRADLLYAARRAETMEEFKKVIREIRIRKEKEREFQKNQRTAPPPEEPATP"
     gene            complement(3897..>4687)
                     /locus_tag="VGQ24_13785"
     CDS             complement(3897..>4687)
                     /locus_tag="VGQ24_13785"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEV8455964.1"
                     /translation="AGAEPYIAPLRPENGFLLHLDQVPQDTLRRSKIVFVNYPNNPTA
                     AVATAAYLERTVAVCRAHGILLAYDNAYCDLTFDGYRAPSIFETAGADEVAIEFFSLS
                     KSYSMTGWRLGFAAGRPELIGALTRVKSYVDTGPFLAVQKAGAAALDRGEELVAPIRS
                     ELQRRRDAAVTALCQAGFRVESPKAAMYLWVPLPPGVASATFAKLALEETGVVVLPGS
                     AFGPAGEGFFRIALTVGSERLRTAAERLGGALERVRRGPVATTV"
BASE COUNT          828 a         1561 c         1505 g          793 t
ORIGIN      
        1 cctgaaaggt taagttctgg cctactaagt gtctggagtg gtggccgagt ggctgaaggc
       61 accggtttgc taaaccggca tagggggtca acccctatcg agggttcgaa tccctcccgc
      121 tccgtgtttg gaagtgagag gtgacaggtg agaggtgaga gggtccaccc cttcgctaca
      181 tctcacttct cacctctcac ttctcacttt ctatgatccc accccgcgtc cgtttcgccc
      241 catcccccac gggatacctg catgtcggcg gcgcccgaac ggcgctgttc aactggctgt
      301 acgccaggca tacgggcggc acgcatgtgt tgcgtatcga agacaccgat cgcgagcgca
      361 gcacggaaga gcacacccgc gtcatcctgg acggcctcac ctggctcggc atcgcctggg
      421 atgagggccc gtacttccag ggcgaatacg cggcccggca ccaggccgat gccgaacggc
      481 ttctcatgga gggaaaggcc taccgctgct tctgcactcg cgaagagctc gatgctcagc
      541 gcgccagggc cgaagccacg ggcgctgggt tccgttacga tcgccgctgc cgggccctca
      601 cgccgtcgca ggtcgaggag cgcgtgcagc gcggcgcgcc atccacgatt cgcttcatca
      661 tggatgacgg ggagatcgcg tggaacgacg cggtgcacgg tccgatcagc tttcagggcc
      721 gcgacctcga cgacttcgtg attctgcgga gcgacaacag cgccatctat aacctggccg
      781 tggtctcgga cgacattggg atgcggatca gccacgtgat ccggggcgac gatcacatct
      841 cgaatacgcc gaagcagatt gccctctatc gcgccctgga ccacgagccg ccggtgttcg
      901 cgcacgtgcc catgattctc ggatccgatg gcaagaagct gtccaagcgt catggagcca
      961 cggcagtagg ggattatcag gagcagggca ttctccccgc ggcgatgcgc aatttcctgg
     1021 cgctcctggg ctggtcgccc ggtggggatc gcgagatcct ggccgaggat gagatgatcc
     1081 ggctgtttac cctcgagggg atccagaaga aagcggcggt gttcgacacc accaagctcg
     1141 agtggatgaa cggccagtac ctctccgccc tccccgtgga ggagctgctc gagccggtgc
     1201 gccggcagct ggagcggatg ggcgttcagg cagcttccga tctgcggccg ctgatcgatt
     1261 cggtcaaagc ccgttcccgg acgattctcc acgtggccga gcaggtggcc gtccgcctcg
     1321 atccggcacg ctccaccctc gacggcaaag gcgaagcctt aatccggaag atgggccctg
     1381 cattcgccga gaacctccag atggcatctt ccgcgctcgc agcgctggga cctgacgagt
     1441 ggaacgccga ccggctggtg gccacactca aggcagtggc cgagacccat ggtctcaagc
     1501 tgggggacgt catgcagccg gttcgggtgg cgctcaccgg gtcgacagtc tccgagccgg
     1561 tgaacgagct tctggcagtg gtggggcgag accggagcct gcggcggctg gatgaggtgg
     1621 cccgcaagtg gaacggaggt gtgagcgcgg cgtgaggtcc agcctgcaat ggttggtcat
     1681 cgccgccgcg gccggatgtg ccaaagcccc accgccacct caacccagac cggtgcccgc
     1741 cgctgagcgg accgacacgc tggaactccc tccctctccc ctgctcgagc cgacaccgcc
     1801 gccgcgcctc tacacgccgg tgcgacttgc cttcgtgggc gacatcaacc tcggcaccgc
     1861 cacgcttccc gatggcatac cgccagacag cggacgcggt ctgctggacc ccgcacgccc
     1921 aagtctctcg ggcgaccttg tcgtgggaaa cttcgaggga gtcctggccg acaccggcac
     1981 ctcgaccaag tgcctcatca ccaaaccgcg cacagtcaaa cggcgaaagc cgacaaaacc
     2041 acgcaccgcc gaggtcccgg cggttcggcc gaattgctac gcctttcgca ctcccatcgg
     2101 acttgccccc cgcctggtcg aggccggttt cacccatctc aatcttgcga acaaccactc
     2161 gaatgatctg ggatggcttg ggcgccagac gaccgagcgt actctcgata gcttgggcat
     2221 caagctgtac ggccctgtcg gaaggatttc ggtggacaca gtccgccggg gtgacagcct
     2281 gaccaccgta ggattgatcg gcttcacgac ctacccgttt gcctacaatc tcctggacat
     2341 agaggagagc gccgcgctgg tggattcggt gcgctcgctg gtagatctgc tgatcgtaac
     2401 cttccacggc ggagcggagg gggtgagggc gctccgaacc ggcgaagcgg ctgaatccct
     2461 gggggccgaa ccgcgggggg acctccggcg ctgggctcgc gcggtgatcg acgccggcgc
     2521 cgatgcggtc atcggccacg gaccccacgt gcttcggggg atggagttct accgcggccg
     2581 gctcattgcg tactcgctcg gcaatttcct cacctaccgc ggtttcaacc tggcaggccc
     2641 actggggatc accggcgtgc tccgactcga gttcgccgag gatcgcacgc tccgccgcgc
     2701 gcgactcgtg cccatggtac aactccccag aagcggcccc gcacccgacc ccggcggcgc
     2761 ggccatccaa ttggttcgaa gcctttcgac ggaggacttc gggcccaccg cggcgcagat
     2821 ctcgcctgcc ggcgagatca cgccacctcc gagcgcggcc ggcgacaagg gagaggtgag
     2881 aggtgagaag tgagaagtaa gaggggctgg agtctagagt tgtctagagt ctaaagacta
     2941 gagtctaaag tctagagctt cagacgaggc gacggcacca tgccagaccc tagaccctag
     3001 gctctagacc ctagactcca ggccttcacg gagttgccgg ctcctccggc ggcggggccg
     3061 ttcgctggtt cttctggaac tcgcgctcct tctctttgcg gatgcggatc tctcggatca
     3121 ccttcttgaa ttcctccatc gtctcggccc gccgggcggc atagagcaga tcggcacgta
     3181 aatccatcag atggttgtag gcccggttct ggtcgatgtt cccggccggt atcggcagca
     3241 gcgccaaaac cgctgccggt atcttgagtc ccgcgatgta gatgttcttc gagtccagcc
     3301 cgaacttctt tcccgcaatt tcagtagtcc agctgggaag cccctgattc ttactggcag
     3361 gatcgttcgc gatcgagtcc agatactgct gcacgattac cgtgaccgcg ctgtccacca
     3421 actgggcgcg gctcttggtc agccgttgcg cgagctcgcg cggggggagc ggcaagggac
     3481 gcacccagag cctgcccaga gccaggccag gcccgatccg gcccagcgga acttgctgct
     3541 gcggagccgc tccgccggtg tcggcgggcg ggggcacggg ccggaccggc tcgggcagcg
     3601 ccggcaccgc ctggcggtcc ggcagctcag gcgtagaggc tctccgctcc gagcgagcgc
     3661 tccgaaccgg cggcaacggc cgggcccggc gctctcccac tgcctgaggg agatcgtagc
     3721 gcatggagac ctgctcacgc ccctgggccg gttcggagag cacgatcaat tggcggggca
     3781 gcggcggcac gctgggtagg cggccagtta cccagccgaa gagcagaacc gaatgcgcga
     3841 cgacgctggc cacgattgcg atccatggcc agggccggcg cttcggcagc cccaggtcaa
     3901 acggtggtcg caacgggtcc ccgccgtacg cgctcgagcg ctccgccgag ccgctcggcg
     3961 gccgttcgta gccgctccga accgaccgtc agcgcgatcc gaaagaagcc ctcacccgcc
     4021 gggccaaagg cgctccccgg cagtaccacc accccggttt cttccaaagc cagcttggca
     4081 aaggtcgcgg aagcgacgcc gggcgggagc ggcacccaga gatacatcgc ggccttgggt
     4141 gactccaccc tgaatccggc ctggcacaag gcggtgactg cggcatcccg acgccgctgg
     4201 agctcgctcc ggattggcgc caccagctct tccccccggt caagcgcggc cgcgcccgcc
     4261 ttttgaaccg cgaggaatgg tccggtgtcc acgtaggact tcactcgggt cagggctccg
     4321 atcagctccg ggcgtccggc ggcaaacccc aggcgccatc ccgtcatcga gtaactcttg
     4381 gacaacgaaa agaactcaat ggccacctcg tcggcccccg cagtctcgaa aatgctgggg
     4441 gcacggtatc catcgaacgt caagtcgcag tacgcattgt cgtatgcgag caagattccg
     4501 tgagcccggc acacggcgac ggtccgttca agatatgccg ctgtcgccac ggccgctgtc
     4561 ggattattgg gatagttgac gaatacgatc ttgctgcgcc ggagcgtgtc ttgcgggacc
     4621 tggtccaggt gcaggagaaa accgttctcc ggccgtagcg gcgcaatgta tggctcggcg
     4681 ccggcga
//
LOCUS       DASYRV010000519         1652 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3848863, whole genome shotgun sequence.
ACCESSION   DASYRV010000519 DASYRV010000000
VERSION     DASYRV010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1652
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3848863"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..359
                     /locus_tag="VGQ24_13790"
     CDS             <1..359
                     /locus_tag="VGQ24_13790"
                     /inference="COORDINATES: protein motif:HMM:NF045212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455965.1"
                     /translation="GAISSPQFPSIPATIVKGAVLEAACSWRELRVVTIDATPPRSRI
                     EAQVVHRGTRREFIGFNRARHAILEAAILATRTHLLPAEQIREEYARLQVIVDKTAGP
                     REREAMELLTQHVRSR"
     gene            343..1320
                     /locus_tag="VGQ24_13795"
     CDS             343..1320
                     /locus_tag="VGQ24_13795"
                     /inference="COORDINATES: protein motif:HMM:TIGR00144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ribofuranosylaminobenzene 5'-phosphate
                     synthase family protein"
                     /protein_id="HEV8455966.1"
                     /translation="MSDPGSVFVEAPARLHFGVLDLRGRLGRCFGGLGAAIPSPSLLL
                     EAAPASGITALGPDAERAIEFAGRFLSHHQLSGGARLTVHRTIPSHAGLGSGTQLGLA
                     VARALAELHGVATNPVELARATARGKRSAIGTWTFALGGFIVEGGRKPGTEELAPLLA
                     RFPIPDTWHCVVAVPSGRTGLSGDAEAKAFEELPSPPDRDVERVSHLVLMQLLPALVE
                     ADLPSFGQALSAVQRITGSWFAGQQGGVFAPGQTESLISGMAGWGAAGVGQSSWGPAA
                     YGLVESADAAVDLARQVRHAMGNMGSVFQGGFAPRGAQVWRASRPPKPD"
BASE COUNT          238 a          569 c          550 g          295 t
ORIGIN      
        1 agggcgccat ctccagtccc cagttcccgt ccataccggc gaccatcgta aagggcgcgg
       61 tcctggaggc agcctgttcc tggcgcgagc tccgggtcgt gaccatcgat gcgacgccac
      121 cgcggtccag gatcgaggcc caggtggtgc atcgaggaac caggcgcgag ttcatcgggt
      181 tcaatcgggc gcggcacgcc atcttggaag cggcgatcct cgccacccgc acccacctgc
      241 tcccggccga gcagatccgg gaagaatacg cccggcttca ggtcatcgtt gacaagaccg
      301 ccgggccccg ggaacgggag gcgatggagc tcctcaccca gcatgtccga tcccggtagc
      361 gtcttcgtcg aggccccggc acggctccac tttggtgtgc tcgaccttcg aggccgcctg
      421 ggccgttgct tcgggggact cggcgccgcg attccatcgc cgtcgcttct tctcgaggcc
      481 gcaccggcga gcggcatcac ggctctggga cccgacgcgg agcgtgccat cgagtttgcc
      541 ggccgcttcc tgtcccacca tcagctctcg ggcggggctc gtctcaccgt tcatcggacg
      601 attccgagcc acgccggcct gggttcgggt acccagctgg ggctggcggt cgcccgggcc
      661 ttggccgagc tgcacggagt ggccaccaat ccagtcgagc ttgcccgcgc cacggcccga
      721 ggtaaacgct ccgccatcgg gacatggacc ttcgcgctcg gcgggttcat cgtggaaggc
      781 ggccggaagc ctggcaccga agagctggca cccttgttgg cccgtttccc gatcccggac
      841 acgtggcact gtgtcgtggc ggtgccttca ggccggaccg gtctcagcgg tgacgccgag
      901 gcaaaggcgt tcgaggagct tccctcgccg ccggaccgcg acgtggagcg cgtatcgcat
      961 ctggtcctga tgcagctgct tcccgcgctg gtcgaggccg acctgccgag cttcggccag
     1021 gcgctctcgg cggtgcagcg catcaccggc tcctggtttg ccggacagca ggggggcgtg
     1081 ttcgccccgg gacagaccga gtcgctgatc tccggcatgg ccggatgggg cgccgccggg
     1141 gtaggccaga gctcctgggg tccagcggcg tatgggctgg tggagagcgc ggatgcggcc
     1201 gtcgacttgg cccggcaggt gcgtcatgcc atgggtaaca tggggtcggt tttccagggc
     1261 ggatttgccc ctcggggcgc ccaagtctgg agggcctcca gaccccccaa gcctgattga
     1321 cagttcattt ttcggggtgt atactgaccc ctctcagctc ccgtaatcgg tcactcggca
     1381 ggtttccctc agggcgccag cctgttactg tcgcgctgac cctgcccacc cgggagacga
     1441 acggagaatt ctgcaatggc tcaccggcgt cgctgagaga tgagatgggt ttgttcccat
     1501 tagctgccgt tctttcacca atccgcccct cgccgcaccc ccgtacggcg cggcactggt
     1561 ggccagacct gctctggcgg cactgggcag cgaatgtgca gcagtgcatg atcggcaacg
     1621 ctcctcttca gtcagccccc tctcggccaa cc
//
LOCUS       DASYRV010000520         7199 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3439745, whole genome shotgun sequence.
ACCESSION   DASYRV010000520 DASYRV010000000
VERSION     DASYRV010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7199
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3439745"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(12..1127)
                     /gene="pstS"
                     /locus_tag="VGQ24_13800"
     CDS             complement(12..1127)
                     /gene="pstS"
                     /locus_tag="VGQ24_13800"
                     /inference="COORDINATES: protein motif:HMM:TIGR00975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HEV8455967.1"
                     /translation="MFRATLLCLSSIALLACGRSDRSPAGDRNGAGSATVGSAALTGA
                     GATFPAPIYTKWFDAYAHQTGVRINYQSIGSGGGIRQFIEGTVDFGASDAPMTDGQVA
                     AVKGNVLHVPTVLGAVVATYNLPSLGKTPLRFDGATLADIFLGRIRRWNDRRLAALNP
                     GVTLPDQDIIVVHRSDGSGTTFIFTDYLSKISSEWKSKVGKATSVEWPAGLGGKGNEG
                     VTQQVKQTEGAIGYVELIYAISNGLPAALIKNADGAFVEPSLKSVSAAASGAGLGADT
                     DFRVSISNPPGRDSYPVSSFTWLLVHKESPDSAKARTLHSFLIWMLRPEAQRMAADLH
                     YAPLPVAVIELLQRRLGALVPVTNPLHGRDRPGASRV"
     gene            complement(1249..2286)
                     /gene="pstS"
                     /locus_tag="VGQ24_13805"
     CDS             complement(1249..2286)
                     /gene="pstS"
                     /locus_tag="VGQ24_13805"
                     /inference="COORDINATES: protein motif:HMM:TIGR00975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HEV8455968.1"
                     /translation="MKRSLLIISGILASVAPAAAQSLTGAGATFPNPIYTKWFDAYSK
                     KTGVKINYQSIGSGGGIRQFTESTVDFGASDGPMNESQIQAVNGNVLHVPTVLGAVVV
                     TYNLPTLGDTKLKFDGNLLVDIFMGRVTNWSDPKIAALNPGVKLPNIDLIVVHRSDGS
                     GTTYVFTDYLNKFSREWKDKVGYATSVNWPTGLGGKGNEGVTQQVKQTEGALGYVELI
                     YAISNKMPYAQVKNASGNFITPSLETVTAAAAGAKLEKDTDFRVSVTNAPGPQAYPIS
                     SFTWLLVRKDNKDPAKAKLIRDFLAWMITPEAQAMAAELHYAPLPGPVVSLVQARLPT
                     LKAGGKSIATR"
     gene            complement(2304..3461)
                     /locus_tag="VGQ24_13810"
     CDS             complement(2304..3461)
                     /locus_tag="VGQ24_13810"
                     /inference="COORDINATES: protein motif:HMM:NF019042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEV8455969.1"
                     /translation="MTLQARRILSGAALAATIAVGSASAQTTYPNVKLTGRLQEQFYY
                     FDNEPYAATVGPKDNFFTRRARIEARGQISENVVVYIQPSFEGGRNLSNLVTTCTGTP
                     LTCRTTGRSGLRLRDAWIDVRFSPEASKGALYLRAGQEKRPYSRYELTSSNNLPSIER
                     GAGQGLVARASNDLFTTAGFMSHDVGASLRYEYKLDDTRLVTLKVGAYNGQGESLNDV
                     NNKKSFGARATAGLYSKLDIGGSWFAHDGIVTVGATPDSAFTNYAWGVDAQWGKPGDE
                     GLYVLGEYLDGNDATAAKNKIRGIQGLAAYNYRFKSPTSWLYAIEPAFRVDLADPNTS
                     VDNDRATLITAVLGIYLSSKAQLRVAYERESFQGDVTPSISGVRSALTVNF"
     gene            complement(3586..4116)
                     /locus_tag="VGQ24_13815"
     CDS             complement(3586..4116)
                     /locus_tag="VGQ24_13815"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEV8455970.1"
                     /translation="MTAPLLLRLSAHDRALRMRCAISPAAPRASLLAWRVITHFGGTG
                     ASLLAASLPLIACCALQQASRLALATLVVSHLIVQVVKRTVVRGRPAKVECCVSLVRE
                     PDCFSFPSGHAAASMSVALAYGTSFPAWAAPFLFMAALVGFSRVRLGVHYPSDVLVGQ
                     LIAAVTVVGLILFGWP"
     gene            4289..4699
                     /locus_tag="VGQ24_13820"
     CDS             4289..4699
                     /locus_tag="VGQ24_13820"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8455971.1"
                     /translation="MMSPTVQPLQPTILVVDDEEPLRHYMGRVMTDDGYRVLVAGNGL
                     EGLALLEKSAPGIHLVITDVAMPMMTGPEMAARIATQPEPPPVLFVSGGHDQADLPGP
                     LLKKPFRPDDLSRLVRWLLRGRTEPCSIAGVGSG"
     gene            5125..5421
                     /locus_tag="VGQ24_13825"
     CDS             5125..5421
                     /locus_tag="VGQ24_13825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455972.1"
                     /translation="MGGLLLNQFPGHLPERRLPLPGARPDLDAESAQPAAKLDSRLPE
                     PTADLSGSRFDRLACAPFQPSEKPEQPRHILGAKAIALPAQPIEVHLGVPSGIG"
     gene            complement(5670..>7199)
                     /gene="ppk1"
                     /locus_tag="VGQ24_13830"
     CDS             complement(5670..>7199)
                     /gene="ppk1"
                     /locus_tag="VGQ24_13830"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR03705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HEV8455973.1"
                     /translation="TDLTIDEDDAEDLLQTIEENLRQRLHGDAVRLEIAEAADERFVQ
                     MLVGALDLQDRDVYRVAGPVDLTGFLALHRLDGFRALKDEPLIPGAPPAFASGADVFD
                     LIRSQDILVHHPFESFGCVVNFIERAADDPQVLAIKQTLYRTSGASPIIRALERAAQN
                     GKQVTALVELKARFDEENNIVWARSLEHAGVHVVYGVVGLKTHCKASLVVRREAEGIR
                     RYVHLSTGNYNPTTARVYTDLGLFTAKPEFGEDTSELFNLLTGYSQGRRWRKFLVAPF
                     GFREQIVELIDRESRNAAVGRPSHIVVKMNALVEPTVIDALYRAARSGVRIDLVIRGT
                     CCLRPGIPGLSENIRVISIVDRFLEHSRIFYFENAGDPEVFLGSADWMPRNFYRRIEV
                     MFPVEDARLKSRVTQELIQVVLNDNVKARQLQADGTYARVKPGEGQEEVRSQTVFQTL
                     ARESARVAVDSALRFVPIFGPSGAPPADEPVSSNGGQAGQRSTPPRVRSPRSRKRPEP
                     A"
BASE COUNT         1267 a         2312 c         2292 g         1328 t
ORIGIN      
        1 atggtgggat tctagactct gctggcgccc ggtcggtcac ggccatgtaa cggattggtc
       61 acgggaacca aggcgcccag cctccgctgg agcagctcga tgacggccac agggaggggc
      121 gcgtagtgta gatccgcagc catgcgctgc gcctcgggcc gcaacatcca gatgagaaaa
      181 ctgtggagcg tcctggcctt ggcgctatcg ggactctcct tatgcaccag gagccaggta
      241 aacgaggaga cggggtagga atcccggccc ggagggttgc tgatggagac gcggaagtcc
      301 gtatcggcac cgagccccgc tccgctcgca gcggcggaca cgctcttgag gctgggctcg
      361 acgaacgctc cgtcggcgtt cttgatgagg gccgccggga gtccgttgga tatcgcgtag
      421 atcagctcga catatccgat ggctccttcc gtttgcttga cctgttgggt gacgccctcg
      481 ttccctttcc cgcccagtcc ggcgggccat tccaccgacg ttgccttgcc caccttgctc
      541 ttccattcgg atgagatctt ggagaggtag tcggtgaaga tgaacgtcgt cccggaaccg
      601 tcggaccggt gaaccacgat gatatcctgg tcgggtagag tcacaccggg attgagcgcc
      661 gccagccgcc ggtcgttcca ccgtctgatg cggccgagaa agatgtcggc caatgtggcg
      721 ccgtcgaacc gcagcggcgt cttgcccagc gagggcaggt tataggtcgc gacgactgcg
      781 ccgagcaccg ttgggacgtg gagcacgttg cccttcaccg ctgcgacctg cccgtcagtc
      841 atgggcgcgt cgctggcgcc aaagtcgacg gtgccctcga tgaactggcg gatgccccct
      901 cccgagccaa tggactggta gttgatgcga acgccggtct gatgggcgta cgcatcgaac
      961 cacttggtgt agatcggagc gggaaaggtt gcgcctgcgc ccgtaagcgc cgccgagcct
     1021 accgtcgcgg accccgcacc gttccggtca ccggcgggag aacggtcact gcggccacag
     1081 gcaaggaggg cgatgctgct gagacagagg agcgtagcgc gaaacatagt tcctccctga
     1141 agggcggaag ctggatcagc tcagtccaag gtgctacgct gacccatgac acgcaaacgg
     1201 ccggcaccag tggcgccggc cgtcagcctt cggctgcaat gcgttgtgct accgtgtcgc
     1261 gatcgacttc ccgccggcct tcaatgtagg caggcgcgcc tgaaccaggg agacgaccgg
     1321 gcccgggagc ggagcgtagt gcaattcagc cgccatcgcc tgggcttcgg gcgtgatcat
     1381 ccaggccagg aagtcacgga tgagcttcgc cttcgccgga tccttgttgt ctttcctgac
     1441 caggagccag gtgaatgacg agatgggata agcctggggt ccgggtgcat tggtgaccga
     1501 taccctgaaa tcggtgtcct tctccagctt cgcgcccgct gcggctgcgg taaccgtctc
     1561 caatgacgga gtgatgaagt tgccgctggc attcttcacc tgggcgtatg gcattttgtt
     1621 cgagatggcg tagatcagct ccacatagcc gagcgcgcct tccgtctgtt tgacctgctg
     1681 ggtcacgccc tcgtttcctt tcccacccag ccccgtcggc cagttcaccg aggtggcgta
     1741 accgaccttg tccttccatt cgcgggagaa cttgttcagg tagtcggtga acacgtacgt
     1801 ggtgccggaa ccgtcggagc ggtgaaccac gatgaggtcg atgttcggca gcttcacccc
     1861 gggattcagt gccgcgatct tggggtcact ccagttggtc acccggccca tgaagatgtc
     1921 gaccaggagg ttgccatcga acttgagttt ggtgtcaccc agggtcggca ggttgtaggt
     1981 cacgaccacg gcgcccagca ccgtgggcac gtggagcacg ttgccgttca ccgcctggat
     2041 ctgggactcg ttcatcggtc catcactggc gccgaagtcc acggtgctct cggtgaactg
     2101 gcggatgccg ccgccggatc cgatcgactg atagttgatc ttgacgccgg tcttcttgct
     2161 gtaggcgtcg aaccacttgg tgtagatcgg attggggaag gtcgcccccg cgccggtcag
     2221 gctctgggcc gctgccggcg cgaccgaagc cagaatgccg ctgatgatca ataggctgcg
     2281 cttcatcact tatctcctgg ctcttagaag ttcaccgtga gcgcgctgcg cacgccgctg
     2341 atgctcgggg tgacatcacc ctggaagctc tcgcgttcgt acgccacccg gagctgggcc
     2401 ttactcgaca ggtagatccc cagcaccgcg gtgatcaggg tagcccggtc attgtccacg
     2461 ctggtattgg ggtcggccag gtcgacccgg aacgccggct cgatggcgta gagccacgat
     2521 gtcggactct tgaaccggta gttatacgcc gcaaggccct ggatgcctcg gatcttgttc
     2581 ttggccgccg tcgcgtcgtt gccgtcgagg tactcgccca acacatacag cccttcgtcg
     2641 cccggcttac cccattgcgc gtcgacgccc caggcatagt tggtaaacgc cgagtccggc
     2701 gtcgcgccga ccgtcacgat gccatcgtgg gcgaaccagg agccaccgat atcgagcttg
     2761 gagtagagac cggcagttgc gcgtgcgccg aagctcttct tgttgttcac gtcattgagg
     2821 ctctcaccct gtccgttgta ggccccaacc ttcagagtga ccagccgggt gtcatcgagc
     2881 ttgtactcgt atcggaggct cgcccccaca tcgtgggaca tgaacccggc ggtcgtgaac
     2941 agatcgtttg acgctcgagc gaccaggcct tggccggcgc cgcgctcgat ggacggcaga
     3001 ttgttggatg aggtcagctc gtaacggctg tacggccgct tttcctgtcc ggccctgagg
     3061 tagagcgccc ctttgcttgc ctcggggctg aagcgcacgt cgatccaggc gtcccgaagc
     3121 cggagcccac tgcggcccgt ggtacggcag gtcagtgggg tgccagtgca ggtggtgacc
     3181 aggttgctca gattacgacc gccttcgaac gaaggctgga tgtacaccac cacgttttcc
     3241 gagatctggc cccgcgcctc gatgcgcgcc cgccgggtga agaagttgtc ctttgggccg
     3301 acggtggcag cgtagggctc gttgtcgaag tagtaaaatt gctcctgaag acggccggtg
     3361 agcttgacgt tcgggtatgt ggtctgcgcg ctcgctgacc cgaccgcaat cgtggccgcc
     3421 agcgccgcac cgctcaggat cctacgcgcc tgcagggtca tatggccttt cagctggatt
     3481 gagtgaccta cgcatcgctg cgatgctgtc tgagggcagc taagtagccg aaaagcggtc
     3541 acggcgaatc ggtgatcctg taacgaaccg gtaaaatcgc cgttctcatg gccagccaaa
     3601 caatatgagt ccaactaccg tcaccgcggc gatgagctgg cccaccagca cgtcacttgg
     3661 gtagtgcact cccaggcgca cccgagagaa gcccaccaga gcggccatga acaggaacgg
     3721 cgccgcccac gcgggaaagc tggtcccata cgccagcgcg accgacatcg aagcggcggc
     3781 atgtcccgac gggaatgaga aacaatccgg ctcccgcacc aggctcacgc agcactccac
     3841 tttcgccggg cggccgcgga caaccgttcg tttgacaacc tggacgatga ggtgggacac
     3901 aaccagcgtc gcgagcgcga gcctcgatgc ctgctggagc gcgcagcagg cgatcagggg
     3961 aagactcgcc gccaggagcg aggccccggt gccaccgaaa tgggtgatga ccctccacgc
     4021 caacagcgaa gcccgcggcg cagccgggct gatggcgcag cgcatccgca acgcccggtc
     4081 gtgggcgctg aggcgtagga gcagcggtgc ggtcattgcc cctgaaagtg gcgtccgacg
     4141 gcaaccgctt cgccgcggtc aggttacggc tcggtaacgg tcttccgccg ccgcggccaa
     4201 ccgcgaccgg gccttcaccc ggctgttacc agcgcacccg actttgaggg ctcccctggc
     4261 tcagcccgcg ccttatgagg agccctcgat gatgtcgccc accgtccagc cgctgcaacc
     4321 caccatcctg gtggtggacg acgaggagcc gctgcggcat tacatgggga gggtgatgac
     4381 cgatgacggg taccgggtgc tcgtggcggg gaatggcctg gaaggtctcg cccttctcga
     4441 aaaatccgcg cccgggatcc atctggtgat cacggacgtc gccatgccga tgatgaccgg
     4501 ccccgagatg gcggctcgca ttgccacaca gccagagccg ccgccagtgc tcttcgtgtc
     4561 cggtggtcac gatcaggcgg atctaccagg tcccctgctc aaaaaaccat ttcgcccgga
     4621 cgatttgagc aggctggttc gctggctgct ccgcggcaga accgagccct gctctatcgc
     4681 tggcgtaggg tcagggtgag gcgcctcccg ggctcccgca ggccccttcc tcagagaccc
     4741 ccctatcgcg tcagcccgca tgaggaaccg gcttgcccgg tcgccgcccc acagggcgtc
     4801 gaagcgttca aaggctgcgg ttgcctgctc accagcgagg ccctctaaag ttcgcaggcc
     4861 acgctcggat ccagagaggc gatccggatt gcgcccggac agagtcgcga gtgaggatgc
     4921 gatctcctcc gaaagcacgt gcatgtcgtg catggtgccg aggaaatcct gggcctcctt
     4981 cagtcgggtg acgagacctc tgacccgcga agcacggcgc gcaaccggct cgagcaaata
     5041 gcgcagccgt ttgatgcgta tcctggccct atgcccctcc ttgaagtttg ccgcttcgtg
     5101 cacccgctcg agggcagctc ctaattgggt ggcctgctgc tgaatcagtt ccccggtcac
     5161 ctgcccgaac gtcggctgcc tcttcccggg gcccgtcccg atctcgacgc ggagagtgcc
     5221 cagccggcgg cgaaactcga tagccgcctt cccgaaccga cggccgacct cagcggtagc
     5281 cggttcgatc gtctcgcatg tgcgcccttc cagccgtccg agaagccaga acagccccgg
     5341 catatcctcg gcgccaaggc gatcgccctg cctgcgcagc caatcgaggt gcacctcggt
     5401 gtcccgtccg gcattggttg acagcatcag ctttcgcagt cgttgtcgca ttttcttcgt
     5461 cacgctgcct tcgagctgag agcgataggc acgggtacag cttcgaaggc gccggaggcc
     5521 gactcgaaaa tcgtgcagcg cctcggcatc tcgagcatca gtcagccggg tctgggcgcc
     5581 ttctatttga tcgaggtaac tcagggcgag cagtcgtgag gattcctggg ccgatcggtc
     5641 caacaggtcg gatggaagtc gcgcagtctt cacgccggct cggggcgctt gcgagaccgg
     5701 ggcgagcgta cccgtggggg tgtggaccgt tgaccagcct ggcctccgtt gctggagacc
     5761 ggctcgtcgg ccgggggggc tccggacgga ccgaagatgg gcacgaatcg aagggccgag
     5821 tccaccgcca cccgcgcgga ctctcgggcc agggtttgaa agacggtttg cgaccgaact
     5881 tcttcctggc cttctcccgg ctttacccgc gcatatgtac catccgcctg cagctgccgg
     5941 gctttgacgt tgtcgttcaa caccacctga atgagctcct gggttacccg agacttgagc
     6001 cgggcatcct cgaccgggaa catcacctcg atgcgacgat agaaattccg cggcatccag
     6061 tcggcgctgc ccaggaagac ttccggatcg cccgcgttct cgaaatagaa aatccggctg
     6121 tgctccagga accggtccac tatgctgatc acccggatgt tctcggagag gcccgggatt
     6181 cccggcctca ggcagcaggt cccccgaatg actaaatcga tgcgcacgcc cgaccgagcg
     6241 gcccggtaca aggcgtcgat gacggtcggc tcaaccagcg cgttcatctt gacgacgatg
     6301 tgggaaggcc ggcccacagc cgcattccgg ctctcgcgat cgatcagctc cacgatctgc
     6361 tcccggaagc cgaacggggc caccaggaat tttcgccaac gacgcccctg ggagtacccg
     6421 gtgagcagat tgaacagctc actggtgtcc tccccgaatt ccggcttggc ggtgaacagg
     6481 cccaggtcgg tatagactct tgcggtcgta gggttgtagt tacccgtcga gaggtgcacg
     6541 taccgccgga taccctcggc ctcgcgtcgg acgacgagcg aagccttgca gtgggtcttc
     6601 agtcccacga cgccgtagac gacgtgcacc cctgcatgct cgagcgaccg agcccagacg
     6661 atgttgttct cctcgtcgaa ccgggctttg agctcgacca gggcggtcac ctgctttccg
     6721 ttctgcgccg cgcgctccag ggcgcgaatg atggggctcg caccgctggt ccggtacagg
     6781 gtctgcttga tcgcaaggac ctgcggatcg tcggccgcgc gctcgatgaa gttcacaacg
     6841 cagccaaacg actcgaaggg atggtggacc aggatatcct ggctgcgaat cagatcgaac
     6901 acgtccgcac cggaggcaaa cgcgggaggc gcgccgggaa tcaatggttc atccttgagc
     6961 gcgcggaatc catccagccg gtgcagcgcc aggaaccctg tgagatccac cggtccggca
     7021 acccggtaga cgtcccggtc ctgtagatcg agggccccga ccagcatctg cacaaaccgc
     7081 tcgtcagcgg cctctgcgat ctcgagccgc accgcgtccc cgtgcagccg ctggcggagg
     7141 ttttcctcga tggtctggag caggtcttcg gcgtcgtcct catcgatcgt gagatcggt
//
LOCUS       DASYRV010000521        10886 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1983412, whole genome shotgun sequence.
ACCESSION   DASYRV010000521 DASYRV010000000
VERSION     DASYRV010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10886
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1983412"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..480)
                     /locus_tag="VGQ24_13835"
     CDS             complement(<1..480)
                     /locus_tag="VGQ24_13835"
                     /inference="COORDINATES: protein motif:HMM:NF013568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455974.1"
                     /translation="MSKPTGYPDLDALLPRLDAIASLDSGALAAEITSVLGRKSGVLT
                     AALRSVATLPVDQRKAYGGAVNRLKARFEEAFARRGEALEAESRRSELAATDPTMPGR
                     RRWIGAAHPVTRVVDEIVDIFRGIGFTVAVGPEVETDWFNFTALNFPADHPAMDMHDT
                     "
     gene            complement(577..936)
                     /gene="rplT"
                     /locus_tag="VGQ24_13840"
     CDS             complement(577..936)
                     /gene="rplT"
                     /locus_tag="VGQ24_13840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEV8455975.1"
                     /translation="MPRVKNGVAHHARKKKIMRAAKGARGGRSKLYKAAKETAERAMR
                     YAYRDRRKKKGEFRSLWITRINAAARTQGMSYSRFMAGLKKAGVDINRKVLADLAVHD
                     LDAFARIAELAKGTDRP"
     gene            complement(946..1140)
                     /gene="rpmI"
                     /locus_tag="VGQ24_13845"
     CDS             complement(946..1140)
                     /gene="rpmI"
                     /locus_tag="VGQ24_13845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEV8455976.1"
                     /translation="MPKQKTKRAAMKRFKTTGSGKLKRWHANHSHILTKKSRKRKNRL
                     KKGDLVSSADFPRVSRLLQA"
     gene            complement(1271..1792)
                     /gene="infC"
                     /locus_tag="VGQ24_13850"
     CDS             complement(1271..1792)
                     /gene="infC"
                     /locus_tag="VGQ24_13850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEV8455977.1"
                     /translation="MSTNDREKRIRVNRMIRISPVRVITAAGEQLGVLPIEEALAAAQ
                     ERGLDLVEVAPTARPPVVKIMDYGKYKFEEAKAARAAKKKQHIIQLKEVKYRPGIDDH
                     DFDFKTRHAREFLGDGNKVKVTMMFRGRQMAHLELGKAVLDRVAAILADVGKIESDAK
                     LEGRNMTMVIAPK"
     gene            complement(1997..2929)
                     /locus_tag="VGQ24_13855"
     CDS             complement(1997..2929)
                     /locus_tag="VGQ24_13855"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEV8455978.1"
                     /translation="MPGIDVTLLQSFQVGGLRCHTLEGGLQRLDGGAMFGVVPRTLWR
                     TRIEPDARNRIPLAMRCVLVEHADGLLLIDTALGNKEDAKFLDIYGVENQGLEGATQL
                     EDALASAGFLPRDIKWVINTHLHFDHAGGNTTMDPELENDPRRHVRPAFPNATYVVQR
                     AELEFARHTNERTRASYLPHNFEPVAAADRWRLLDGNTEVLPGISVRLTPGHVPFHQV
                     VVLRDRGETAVFVGDLFPTTAHLPLPWIMGYDLEPLRTLESKRALLAEAVAGAWRLIF
                     EHDARVVMGTPVQEGKDVVLRDVTPAPEPAHASR"
     gene            complement(2911..3783)
                     /locus_tag="VGQ24_13860"
     CDS             complement(2911..3783)
                     /locus_tag="VGQ24_13860"
                     /inference="COORDINATES: protein motif:HMM:TIGR00573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEV8455979.1"
                     /translation="MTGISAHPESTLLDRVLAHLRFGPRTPATLCHEILGLLGAQPTI
                     CNRVAIALLGADPRVRQLADGRWSLVPEAQGSPLIDDCAFAVVDVETTGMRAVGGDRI
                     TEIAVAVVHGGRREIVFDSLVNPERPIPRAVRVITNITNEMVRAAPRFSDLAEQLMAA
                     LAGRVFVAHNARFDWNFVSAELRRSRALTLEGSRLCTVRLARRLVKGVRSCGLDNLCR
                     FFGFDNQARHRAAGDALVTAELLCRLLALAREEGARTLQDLASIEARRTRAGRRKRRA
                     MPTEPRADSCPELM"
     gene            complement(3780..5012)
                     /locus_tag="VGQ24_13865"
     CDS             complement(3780..5012)
                     /locus_tag="VGQ24_13865"
                     /inference="COORDINATES: protein motif:HMM:NF014344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase family protein"
                     /protein_id="HEV8455980.1"
                     /translation="MPVHVTSEIEALQSVLVHTPGRELEAVTPGNREDYLYDDIIDLE
                     IAQREHRQFVSILKRFARVFQVRDLLAEILQQPEARDHLITKTMDVVPSDALAQRLSA
                     LPAEEIVGMLIEGTEEESGPISRALNEVGFAFPPLPNLFFPRDIGMVIGEHVVVGSMR
                     YGVRWTEELLIKALFRFHPELSNAGLLYDGSEERRDTYTLEGGDVHYLRPDLLVLGFS
                     ERTSPAALDQLCETVFTRGLVTDVLVVVMPKAPTAIHLDMIFSQIDHELCVVYPPFFV
                     GPERLPVLHRRKGTDSVREMPNFFAALRAVDLPLEPVFAGGERRISQEREQWSSACNF
                     LAVRPGTLVSYRRNDATLCELTSVGFRVVPAVNFLAFDDWTDAKHRTVITIEGSELAR
                     GGGGPRCMSLPLRRAAAS"
     gene            complement(5073..5693)
                     /locus_tag="VGQ24_13870"
     CDS             complement(5073..5693)
                     /locus_tag="VGQ24_13870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensing transcriptional repressor Rex"
                     /protein_id="HEV8455981.1"
                     /translation="MRKVAESTVRRLSLYLRFLEEFEGQGIETVSSGALASRGGTTSA
                     QVRKDLSFFGSFGKRGLGYPVPELANRLREILGLKRRYRVGMIGAGKIGSALVQYRGF
                     KQRGFDIVAIFDSDAAKIGRQWNGLTVLDIASLEKELARHPLDMAVLVVPAAVAQAVT
                     DRLIGLRVKAILNFAPVQLSVPDDVVVKTVNLALELETLSYALANR"
     gene            complement(5725..6519)
                     /gene="rsmA"
                     /locus_tag="VGQ24_13875"
     CDS             complement(5725..6519)
                     /gene="rsmA"
                     /locus_tag="VGQ24_13875"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: protein motif:HMM:TIGR00755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEV8455982.1"
                     /translation="MPRAKRRLGQHFLADPRILARIADALEAGPADRVLEIGPGTGGL
                     TGALLARAGQVIAIEKDRDLIPPLRARFPGARLVEGDALDLDWHELVEAPFLVVGNIP
                     YNITSPLLDKALLPPRPARIVFLVQKEVADRVTAEAGTPEYGALSIGIQVAAGAERLF
                     TVPAGAFQPRPKVDSAVLRLTPLSDPPVTDEERDSFRALVVGLFGFRRKQMLRALREL
                     TEWDAARVSGVLASVAIAETARPEVVRPLEFVRLHRALVDGGWPAR"
     gene            complement(6522..8048)
                     /locus_tag="VGQ24_13880"
     CDS             complement(6522..8048)
                     /locus_tag="VGQ24_13880"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing SpoIIE family protein
                     phosphatase"
                     /protein_id="HEV8455983.1"
                     /translation="MRLWRAHGRNLQLAAGNDPGWSLPIPDTAGPVPSPEGTSWLEPV
                     DGVSGHWLELAGGSEDELRRAAPRVMPIVAAILDAERQRAFVAEELAGRYEEIDLLYA
                     ISEILGRTVRLDEAAQIIVREVSAVVGARRASIMVYDESSRTLRTVAARGFEPEGLMP
                     VDVEDLSSVAGRVFREQRIVTFDPADPSSVITDAGANRGYRGNSFISVPICYAAPGTE
                     LRCVGVINLTDRIGGDRFTLDDRKLVSAVANQIGAAIENARLVERDLQQQRLQRELEL
                     AHDLQLKLLPSPTVLQGDAEVAARCLPADSVGGDFYTFSRLGRGRVGVMLGDVASHGF
                     SAALVMALIMSAAGIHAAAATTPDETLAALLDSLATELAKTEMHFSVFYGVLDPRAGR
                     LSYASAGHPHAFRVPRSGAPERLEATSPPLGLAAIGTIQRRQVPWTTGTDLLVLWTDG
                     LVDARNDLGEPFGEQRLLDEVSAQRKETPEAIVKAVLARADEFGARPTDDRTLLVLRI
                     "
     gene            complement(8099..8506)
                     /locus_tag="VGQ24_13885"
     CDS             complement(8099..8506)
                     /locus_tag="VGQ24_13885"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEV8455984.1"
                     /translation="MATLVTLRLPSDVNCIEEAVELVTRHCLAGHQATRTTRFRLRVV
                     LSEALSNAIVQGNREDRTKWVDVRAELVPDAIRVWVTDEGAGFDPDSVPEPIRPEQLD
                     EARGRGLYLIRKLVDAVQFNERGNSICMILRRQ"
     gene            complement(8569..8904)
                     /locus_tag="VGQ24_13890"
     CDS             complement(8569..8904)
                     /locus_tag="VGQ24_13890"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEV8455985.1"
                     /translation="MGFSQTKGSGGVTVVEVDGQLIVGNRHELKDLIQAALDRGERRL
                     LVDFSRTGYIDSSGLGALVSISKRIREAGGELRLAGLNDDLRSLFELTKLDTLFTITE
                     TPEQALASF"
     gene            complement(8917..9852)
                     /locus_tag="VGQ24_13895"
     CDS             complement(8917..9852)
                     /locus_tag="VGQ24_13895"
                     /inference="COORDINATES: protein motif:HMM:NF013665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransacetylase"
                     /protein_id="HEV8455986.1"
                     /translation="MSFRRGLLERAAQRGARVVLCEGDDPRIQAAVERLRAERVVEPI
                     VLGGGGIDPAKDPRLGKIARFLRERRPDRIRDGVHALDVAAEPVIFGAALVALGEADG
                     CVAGAVYPSGDVVRAALWAIGTAPGVSLVSSAFYMVMGDDLVLTFTDCAVVPEPTPGQ
                     LAEIALAAARDRSRLVGDSPRVAFLSYSTKGSARGPHVARVQEAAAHFQQLAPHIVSD
                     GELQADAALSPDVGERKAPGSPVTGRANVLVFPDLDAGNIGYKLVQRLGRATAIGPIL
                     QGLARPMADLSRGATPDDIVEVTAMVALQSDSIPA"
     gene            complement(9849..10331)
                     /gene="coaD"
                     /locus_tag="VGQ24_13900"
     CDS             complement(9849..10331)
                     /gene="coaD"
                     /locus_tag="VGQ24_13900"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEV8455987.1"
                     /translation="MTRIAVYPGSFDPPTKGHEDLVRRSLALADHLIVAVAINVVKQP
                     LFSVEERLDMLRASVGDDSRVSFQAFDGLLAEFAKRVRATIIVRGLRAVSDFEYEFQM
                     ALMNRQLHPSLETVFLVPAVDLTYLSSSLVREVARFGGDVTPLVHPKVAAALTQRFRS
                     "
     gene            complement(10328..10843)
                     /gene="rsmD"
                     /locus_tag="VGQ24_13905"
     CDS             complement(10328..10843)
                     /gene="rsmD"
                     /locus_tag="VGQ24_13905"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: protein motif:HMM:NF015559.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HEV8455988.1"
                     /translation="MRIVGGRYGGRRLVMPKDARVRPTADRVREAWMSILGDALTDAR
                     VLDLFAGSGALGLEALSRGADSATFVELNPPSLRALEQNIATLGVAESVTVHRADAMR
                     FAERLPPGAFDVVLADPPYTADHAARLVAHFRRHPFGRILSVEHRSDLELDGDSTRRY
                     GDTAITFCHAP"
BASE COUNT         1887 a         3679 c         3555 g         1765 t
ORIGIN      
        1 cgtgtcgtgc atgtccatcg ccggatgatc ggccgggaag ttgagggcgg tgaagttgaa
       61 ccagtcggtt tccacctcgg gacctacggc gaccgtgaag ccaattcccc ggaaaatatc
      121 cacgatctca tccacgaccc gcgtgaccgg gtgtgccgcc ccgatccacc gccggcggcc
      181 cggcatggtg ggatcggtgg cggccagctc gctccggcgg ctttcggcct cgagcgcttc
      241 gccacgtcgg gcgaacgctt cctcgaaccg cgccttgagc cggttgacgg ccccgccgta
      301 ggctttccgc tggtccacgg gaagcgtggc gacggaacga agggcggcgg tgagcacgcc
      361 gctcttccgg cccagcaccg aggtgatttc ggcggcaagc gcgcccgagt ccaggctcgc
      421 gatggcatcg agccggggca acagcgcgtc gagatcgggg taaccggtag gtttggacat
      481 cgggctcgcg agcacgagga tcttcctaca acgatggggc cgcccgcccg tgcgaacggc
      541 cccatgcggg cagtaggggc gcacagcggt gcgaccctac gggcggtcgg tgcctttcgc
      601 caactcggcg atgcgggcga acgcgtcgag gtcgtgcacc gccaggtcgg cgagaacctt
      661 gcggttgata tcgacgcccg ccttcttgag cccggccatg aaacggctat agctcatgcc
      721 ctgggtgcgg gcggccgcgt tgatgcgggt gatccagagc gagcggaact cgcccttctt
      781 cttccggcgg tcgcgatagg cgtagcgcat ggcgcgctcg gccgtctcct tggccgcctt
      841 gtacagcttg ctccggccgc cacgagcgcc cttggcggcc cgcatgatct tcttcttcct
      901 ggcgtggtgg gcgacgccgt tcttgacgcg gggcatgggc tgtccttacg cctgaaggag
      961 acggctgacg cgggggaaat ccgccgagct gacgaggtca cccttcttca ggcggttctt
     1021 ccgcttgcgc gacttcttcg tcaggatgtg cgaatgattg gcgtgccagc gcttgagctt
     1081 ccccgacccg gtggtcttga agcgcttcat cgcggcgcgt ttggttttct gtttcggcat
     1141 ctttattcct cgtcgctgcg cgactcgggg cggtatcctc gcctcgctgc gctcgtctcg
     1201 ggcggtaacg gcggtaggtt ccgccgcttt ttctaccgcc gcactatcta ccgccgcttc
     1261 acctaccgcc ctacttcggc gcgatcacca tcgtcatgtt gcggccttcg agcttggcgt
     1321 ctgactcgat cttgcccaca tcagcgagga ttgccgccac ccggtcgagc accgcctttc
     1381 ccagctccag atgcgccatc tgccggccgc ggaacatcat cgtgaccttg accttgttgc
     1441 cgtcgccgag aaactcccgg gcatgccggg tcttgaagtc gaagtcgtga tcgtcgatgc
     1501 cgggccggta cttcacttcc ttgagctgaa tgatgtgctg cttcttcttg gcggcgcggg
     1561 ccgccttcgc ttcctcgaac ttgtacttcc catagtccat gatcttgacg acgggaggcc
     1621 gagcggtggg ggcaacctcc accagatcca atccgcgttc ctgggcggcc gcgagggcct
     1681 cttcgatcgg taggactccg agctgctcgc cggcggcggt aatcacgcgc acggggctga
     1741 tccggatcat gcggttcacg cggattcgtt tttcgcgatc gttcgtggac agtgcgtgcc
     1801 tccaacgtaa aaaagaaaaa gcacccggcg atgaaccgga tgcccacgac gcaaagccac
     1861 ggtggctatg gccgaccgat acgcttcgaa gccaggaccc ggttgcgctg cggcatcggg
     1921 ccggcaggct cagggtgggg gaggttgcct ccccactttt acagggtgcg gaagctagcc
     1981 accgcaccca agggtgtcaa cgggacgcgt gcgccggctc gggcgctggc gtgacatccc
     2041 ggagcacgac gtcctttccc tcctgcaccg gtgtacccat caccaccctg gcatcgtgct
     2101 cgaagatcaa gcgccacgct ccggccaccg cctcggccag caacgcgcgt ttgctctcca
     2161 gcgtccggag cggctcgaga tcgtagccca tgatccaggg cagcgggaga tgcgcggtcg
     2221 tcgggaagag gtcgccgacg aacacggcag tctcaccccg gtcccggagc actactacct
     2281 ggtgaaacgg gacatgaccg ggcgtcaggc gcaccgagat gcccggcaat acctccgtgt
     2341 tgccgtccag caggcgccac cggtcggccg ccgccaccgg ttcgaagtta tgcggcagat
     2401 agctggcgcg ggtccgctcg ttggtgtgcc gggcaaactc caactcggct cgctgcacga
     2461 cataggtcgc gttcggaaac gccggccgca cgtgtctccg gggatcattc tccagctcgg
     2521 gatccatggt ggtgttgccg ccggcatgat cgaaatggag gtgggtgttg atcacccact
     2581 tgatgtcccg cggcaggaac ccggccgacg cgagcgcgtc ctccagttgg gtggcacctt
     2641 ccaggccctg gttctcgact ccatagatat cgaggaactt ggcgtcttcc ttgttgccga
     2701 gcgccgtatc gatcaggagc aggccatcgg cgtgctcgac caggacgcac cgcatggcga
     2761 ggggaatgcg gttccgcgcg tcgggctcga ttcgtgtccg ccacagggtc ctcgggacca
     2821 cgccgaacat ggccccgcca tcgagccgct ggagcccgcc ctcgagggta tggcaacgta
     2881 agccaccgac ctggaatgat tggagcagag tcacatcaat tccgggcatg agtccgcgcg
     2941 aggctccgtc ggcatcgcgc gccgcttgcg gcgcccggcg cgggtgcgcc gcgcctcgat
     3001 cgaggcaaga tcctgaagag tgcgggcacc ctcctcccgc gccagcgcaa gcagacggca
     3061 gagcagctcc gcggtaacca gcgcgtcgcc cgcggcgcgg tgacgagctt ggttatcgaa
     3121 gccgaagaag cggcacaaat tatcgagccc gcaggagcgg acgcccttca ccagccggcg
     3181 ggcgagccgc acggtgcaga gccggctgcc ctcgagtgtc agcgcccggg aacgccggag
     3241 ctcggcgctc acgaaattcc agtcgaacct ggcgttgtga gccacgaata cccggccggc
     3301 cagcgcggcc atcaactgct cggccaggtc ggagaatcgc ggcgcggcgc ggaccatttc
     3361 gttcgtgatg ttggtgatga cgcggacggc gcgcgggatg ggtcgctccg gatttaccag
     3421 cgagtcgaac acgatctcac ggcgtccacc atggacgacg gccacggcga tctcggtgat
     3481 ccggtcgccg ccgactgccc gcatcccggt agtctcgacg tccaccacgg caaaggcgca
     3541 atcgtcgatc aacggagaac cctgggcttc gggcaccaga gaccagcgcc catcggccag
     3601 ctggcggacc cgcggatccg cacccaacaa ggcaatcgcg acccggttgc agatggtcgg
     3661 ttgcgcgccg agcagcccca agatctcatg gcaaagcgtt gccggcgtgc gcgggccaaa
     3721 gcggaggtgg gccagaacgc gatcgagcag ggtactctcc gggtgcgccg agatgccggt
     3781 catgaggcgg cggcccgtcg gagcggaagg gacatgcagc gaggacctcc tccaccccgg
     3841 gccagctcgc tgccttctat cgtgatcacg gtgcggtgct tcgcatcggt ccagtcatcg
     3901 aaggccagga agttcaccgc gggcaccacc cggaagccga ccgacgtcag ctcgcagagg
     3961 gtcgcatcgt tcctccgata gcttaccagg gtgcccggcc gtaccgccag gaagttgcag
     4021 gcggagctcc actgctcccg ctcctggctg atgcgccgct cgccaccggc aaacacgggc
     4081 tccagcggca ggtcgacggc ccggagtgcc gcaaagaagt tcggcatctc gcgcaccgaa
     4141 tcggttccct tccgacgatg caggacgggc agccgctcgg ggccgacgaa gaagggagga
     4201 tagaccacgc acagctcgtg gtcgatctgg ctgaagatca tgtccagatg gatggcggtg
     4261 ggggctttcg gcatgacgac gacgagcacg tcggtcacca ggccacgcgt gaacaccgtc
     4321 tcgcacagtt gatccagggc cgcgggtgag gttcgctcgc tgaagcccag cacgagcagg
     4381 tccggacgca ggtagtgaac gtcgccaccc tccagggtgt aggtgtctcg tcgctcctcc
     4441 gagccatcgt acagaagccc cgcgttggac agctccggat gaaagcgaaa caacgccttg
     4501 atcagcagct cctcagtcca tcgtacgcca taccgcatcg acccgaccac cacatgctcc
     4561 ccgatcacca tcccgatgtc ccgcgggaag aacaggttgg gcaacggcgg aaaggcgaac
     4621 cccacctcat tcagtgcccg ggagatcggc ccgctctctt cctcggttcc ctcgatcagc
     4681 atgccgacga tctcctccgc cggcagtgcg ctcagccgct gggcgagagc gtcggacggt
     4741 accacgtcca tcgtcttggt gatgagatgg tcgcgcgcct caggctgctg gagaatttcg
     4801 gcgagcaggt cacgcacctg aaagacccgg gcgaaccgct tgaggatcga gacgaactgg
     4861 cggtgctcgc gctgcgcgat ctcgagatcg atgatgtcgt cgtagagata gtcttcccgg
     4921 ttccctggcg tgaccgcctc gagctcgcga cccggggtgt gcaccagcac ggactggagt
     4981 gcctcgatct cagaggtaac gtgaacgggc atacaacaag ctattcgggg tcatggagta
     5041 agggctaggc cggagcaccg accacctcag cgctatcggt tggctaacgc gtagctcagc
     5101 gtctccagct cgagcgcgag gttcaccgtc ttcactacga catcatcggg gactgagagc
     5161 tggaccgggg cgaagttgag aatggctttc acgcggaggc cgattagtcg gtcggtgacg
     5221 gcttgggcca cagcggcagg aaccaccagc accgccatgt cgagcggatg gcgggccagc
     5281 tccttctcga gggaggcgat gtcgagcacc gtgagcccgt tccactgccg gccgatctta
     5341 gccgcgtcgc tgtcgaagat ggcgacgata tcgaagccgc gctgcttgaa cccgcggtac
     5401 tgcaccagcg cgcttccgat cttccccgct ccgatcatgc cgacccggta gcgccgcttc
     5461 aacccgagta tctcccggag ccgattcgcc agctccggca ccggatagcc cagcccccgc
     5521 ttcccgaacg agccgaagaa ggagagatcc ttccgcacct gcgccgacgt ggtgccgccg
     5581 cgggacgcga gcgcgcccga gctgaccgtc tcgattccct ggccctcgaa ctcctccaga
     5641 aaccgaaggt agagcgacaa gcggcggaca gtggactcgg cgactttacg catgcagcct
     5701 tgctatgtga aatgtttcac aaagctaccg cgcgggccac cccccgtcaa cgagtgcccg
     5761 atgcaggcgc acgaactcca gcgggcgtac cacctcgggc cgcgccgttt cggcaatggc
     5821 gacgctcgcc agcactccac tcacccgggc ggcgtcccat tcggtcagtt ctcgcagagc
     5881 tcggagcatc tgcttccgcc ggaaaccaaa gaggccgacc acgagcgcgc ggaagctgtc
     5941 ccgctcctcg tccgttaccg gcgggtcgga tagcggcgtc agccggagca ccgccgaatc
     6001 caccttcggc ctcggctgga atgctcctgc cggcacggtg aagagtcgct ccgctccggc
     6061 ggcaacctga atccctatgc ttagtgcccc atactccggt gtcccggcct cggccgtcac
     6121 ccgatccgct acttccttct gcaccagaaa cacgatccgc gcggggcgcg gcgggagcag
     6181 cgccttgtcg agtagtgggg aggtgatgtt ataggggatg ttgccgacga cgaggaacgg
     6241 ggcttcgacc agctcgtgcc agtcgaggtc gagcgcatca ccttccacca gccgggcgcc
     6301 ggggaagcgc gcgcgcagtg gcggaatcag atcgcgatcc ttctcgatag cgatcacctg
     6361 ccctgctcgc gcgagtagcg ctccggtgag cccccctgtt ccggggccga tctcgagtac
     6421 tctgtccgcc gggccggcct cgagcgcatc ggcgatccgc gccagaatcc tgggatcggc
     6481 gagaaaatgc tgtcccagac ggcgcttggc ccggggcacg cctagatccg cagcaccagc
     6541 agcgtgcgat catcggtggg gcgagcgccg aactcgtctg cccgcgccag caccgccttg
     6601 acaatggcct cgggcgtttc cttccgctgg gcggagactt cgtcgagcaa tcgctgttcg
     6661 ccgaacggct cccctaagtc gtttcgcgcg tccaccaggc catcagtcca gagcaccagc
     6721 aagtcggtcc cggtggtcca cggcacctgc cggcgctgga tggtgcctat cgcggctaat
     6781 ccgagcggcg gagaggtagc ctccagccgt tccggtgctc cgctccgcgg cacccggaag
     6841 gcatgggggt gtcccgcact ggcataggac agacgccccg cgcgcggatc gagcacgccg
     6901 tagaacacgc tgaagtgcat ctcggtcttg gccagctcgg tggccaggct gtcgagcagc
     6961 gcggcaagtg tttcatcggg agttgtcgcc gcggccgcat ggatgcccgc tgccgacatg
     7021 atcagcgcca tgaccagcgc ggccgagaat ccatgagacg ccacgtcgcc gagcatgacg
     7081 ccgacgcggc cgcggccaag ccggctgaag gtatagaagt caccgcccac cgaatccgcc
     7141 ggaaggcatc gcgcggcgac ctcggcatcg ccctgcagca cggtgggcga cggaagcaac
     7201 ttgagctgga gatcgtgggc cagctcgagc tcgcgctgta ggcgttgctg ctggaggtcg
     7261 cgctccacca gccgggcatt ctcgattgcc gccccgatct ggttggccac cgcactcacc
     7321 agcttgcgat cgtccagggt gaagcggtcc ccaccgatgc ggtcggtcag gttgatcact
     7381 ccaacgcagc gcagttcggt gccgggggcc gcgtagcaga tcggcacact aatgaaggag
     7441 ttgccgcgat agccccggtt ggcaccagcg tccgtgatca ccgagctggg atccgcggga
     7501 tcgaacgtca cgatccgttg ctcgcggaag acccggccag ccacggagct gaggtcctcg
     7561 acgtccaccg gcatgagacc ttcaggctca aagcctcggg ccgcgacggt tcggagcgtc
     7621 cggctggact cgtcgtagac catgatcgag gctcggcgtg ctcccaccac cgcactcacc
     7681 tctcggacga tgatctgggc ggcctcgtcc agccggacgg tacggccaag gatctcgctg
     7741 atggcgtaga ggagatcgat ctcctcgtag cgccccgcca gctcctcggc cacgaacgct
     7801 cgctgccgct ctgcatcgag tattgcggcc acgatcggca tcacccgggg cgccgcccgc
     7861 cgaagctcgt cctcggaccc gccggccagc tctagccagt ggcccgacac accatcgacc
     7921 ggctccagcc aggaggtgcc ttcgggtgag gggacgggtc ccgccgtatc tgggatcggc
     7981 agtgaccacc ctgggtcgtt tcccgcggcg agctggagat ttcggccgtg agcacgccac
     8041 aggcgcaccc gtcctccgac gagcgcaccc agaccctcga gcaggtgatc gagccgccct
     8101 actggcggcg cagtatcatg cagatggagt ttcctcgctc attgaactgt accgcgtcca
     8161 cgagcttgcg gatgaggtag agaccgcggc cgcgggcctc gtcgagctgc tccggcctga
     8221 tcggctcggg cacggagtca ggatcgaagc ctgccccttc atcggtgacc cagacccgga
     8281 tggcgtcggg caccagctcg gcccgcacgt ccacccactt ggtccggtcc tcccgattgc
     8341 cctgcacgat ggcattgctg agcgcctcgg agagcacgac ccggagacgg aagcgcgtgg
     8401 tccgagtggc ctgatggccc gcgagacagt ggcgggtgac gagctcgacc gcttcctcga
     8461 tgcagtttac gtcactggga agacggagcg tgaccagcgt tgccacgccg ctggcatcag
     8521 acgccgaact ccggcggaca cagatgcgaa gcggagaagt catccgagct agaagctggc
     8581 cagagcctgc tcgggcgtct cggtgatggt gaagagcgtg tccagcttgg tcagctcgaa
     8641 gagggagcgc aggtcgtcgt tgaggcccgc gagccgcagc tcgccgcccg cttcgcggat
     8701 gcgcttggag atggacacga gagcgccgag cccggatgag tcgatgtagc cggtacggga
     8761 gaaatcgacc agcagcctgc gctcaccccg gtcgagcgcc gcctggatca ggtccttgag
     8821 ctcgtgccgg ttgcccacga tcagttgtcc gtccacctcc acgacggtca cgccgccgct
     8881 gcccttggtc tggctgaagc ccatcgagtt tctccctcac gccggtatcg aatcggactg
     8941 caacgccacc atcgcggtca cctcgacaat atcatcgggg gtggcgcccc gcgacaggtc
     9001 ggccatcggc cgggcgagtc cttgcagaat gggcccgatt gcagtggccc ggcccagccg
     9061 ctgcacgagc ttgtagccga tgttgccggc atccaggtcg gggaacacca gcacgtttgc
     9121 ccggcccgtc accggcgagc cgggggcctt ccgctccccg acgtccgggc tgagagccgc
     9181 gtcggcctgg agctcgccat cggacacgat atgcggcgcc aactgctgga agtgcgccgc
     9241 cgcctcctgc acccgagcga cgtggggtcc tctggcgctc cccttggtgc tgtatgaaag
     9301 gaaggcgacc cggggcgagt cgccgaccag gcgcgatcga tcgcgcgcag ccgccagcgc
     9361 gatctcggcc agctggcccg gtgtgggctc gggaaccacg gcacaatcgg tgaaggtgag
     9421 caccagatca tcacccatga ccatgtagaa ggccgagctc acgaggctca ctcccggggc
     9481 ggtcccgatg gcccagaggg cagcccgaac cacatcgccc gagggataaa ccgcacccgc
     9541 gacgcacccg tcggcctcac ccagcgccac gagtgccgcc ccgaaaatta ccggctcggc
     9601 cgccacatcg agcgcgtgta ccccgtcccg aatccggtcg ggccggcgtt cgcgaagaaa
     9661 cctggcgatc ttgccgagcc gtgggtcctt ggctgggtcg atacccccac caccaagaac
     9721 gatgggctcg accacgcgct ccgctcggag ccgctcgacc gcggcctgga tccgcgggtc
     9781 atccccctcg cagagcacga cccgggcccc tcgctgcgcc gcgcgctcga ggagtccacg
     9841 gcggaagctc acgaacgaaa ccgctgggtc agcgccgccg ccaccttggg gtggaccagc
     9901 ggggtgacgt cgccaccgaa ccgggcgacc tcccggacca gactcgagct gagataggtc
     9961 aggtccaccg cgggaaccag gaagaccgtc tcgagcgatg gatgcagctg acgattcatc
    10021 aacgccatct gaaattcgta ctcgaaatcg ctgaccgcgc gcagtccgcg cacgatgatg
    10081 gtggccctca cgcgcttggc gaactcggcg agcaggccat cgaaggcctg gaacgaaacc
    10141 cgcgaatcat ctccaaccga ggcacggagc atgtccagcc gctcctcgac cgagaagagc
    10201 ggctgcttca ccacattgat tgccaccgcc acgatgagat ggtcggcgag ggccaggctg
    10261 cggcggacga ggtcctcatg gcccttcgtc ggtggatcga acgagccggg gtagaccgcg
    10321 atgcgagtca tggcgcgtgg cagaaggtga tggcggtgtc gccatagcgg cgagtgctgt
    10381 cgccgtcgag ctcgaggtcg gaccgatgtt cgacggaaag aatgcgtccg aaggggtgcc
    10441 ggcggaagtg cgcgaccagg cgagcggcat gatccgctgt gtagggaggg tcggcaagca
    10501 ccacatcgaa cgcacccgga ggaagccgtt cggcgaagcg catggcgtcc gcccgatgga
    10561 ccgtaacgga ctccgccacg cccagcgtgg cgatattctg ctccagcgcg cggagagagg
    10621 gagggttcag ttcgacgaag gtcgcggagt cagcgccgcg tgagagcgcc tccagaccca
    10681 gcgctccgct tcccgcgaag agatcgagca cccgcgcgtc ggtcagggcg tcgcccagga
    10741 tactcatcca cgcttcgcgg acgcggtctg ccgttggccg cactcgagcg tctttgggca
    10801 tgactagccg ccgaccgcca taccgccctc caacgatacg cactcaaaca acaaacacga
    10861 aagcacgaaa ccacgaaagt acgaag
//
LOCUS       DASYRV010000522         3685 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1983709, whole genome shotgun sequence.
ACCESSION   DASYRV010000522 DASYRV010000000
VERSION     DASYRV010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3685
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1983709"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            364..1221
                     /locus_tag="VGQ24_13910"
     CDS             364..1221
                     /locus_tag="VGQ24_13910"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEV8455989.1"
                     /translation="MNTSIAQEQRSYITVGQENSTSIELYYEDHGSGKPVVLIHGWPL
                     SGASWEKQVAALLAAGHRVITYDRRGFGRSSQPSIGYEYDTFAEDLSKLLTTLDLRDV
                     ALVGFSMGGGEVARYLGAHGSDRVRKAVFLAAVPPFLLKTADNPLGVDGSVFDGIKQA
                     IVNDRPAFLTEFLKNFYNVDELRGKRISDQVVQQSWNVAAGASAKGSLDCVTAWYTDF
                     RKDIPKIDVPTLIVHGDADRILPITATAEPLAKAVKDARKVVIQGGPHGITWTHADQV
                     NKELLAFLK"
     gene            complement(1374..1901)
                     /locus_tag="VGQ24_13915"
     CDS             complement(1374..1901)
                     /locus_tag="VGQ24_13915"
                     /inference="COORDINATES: protein motif:HMM:TIGR02246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgcJ/EcaC family oxidoreductase"
                     /protein_id="HEV8455990.1"
                     /translation="MSRSALLGLASLMVWGAACQPAAKSETTTMAGESAAAPAGLSAQ
                     DEAAVRAVDAEWARAASAGDGNAVAALYAADASLLPPMEPIRQGEAAKKYWVDFTNSF
                     SGPTELTTTAVEGRGDLAYAVGAYRMSVTPKKAGAKPLPVEVGKYVELLKKQADGSWK
                     IVYDMWSADAPPPKQ"
     gene            complement(2118..2312)
                     /locus_tag="VGQ24_13920"
     CDS             complement(2118..2312)
                     /locus_tag="VGQ24_13920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455991.1"
                     /translation="MRTLLPLGALLALSLAGCSNSMTAPGDPADTTPAFACSGNSGNC
                     GGGGSGQHNNNPNNPPTTAP"
     gene            2537..3265
                     /locus_tag="VGQ24_13925"
     CDS             2537..3265
                     /locus_tag="VGQ24_13925"
                     /inference="COORDINATES: protein motif:HMM:NF017771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF899 family protein"
                     /protein_id="HEV8455992.1"
                     /translation="MSIMFPGESPQYRAARDRLLEREIELRRVMEAVAVARRELPAGG
                     VVPEDYVFQEAGTDGTASNVTLSELFAPGRDSLVIYNFMFPRDPGDARPGAKAGETAL
                     LPLAESPCPSCTALLDQLDGAAEHASQSINLAVVAKAPLPRIVTFAKERGWRRLRLLS
                     SANNTYNRDYHGETAEGSQRPMLNVFHRDSGTIRHFWASELFYAPRDPGQDPRHVGTL
                     EPLWNLFDLTPEGRPADWDEQMSY"
     gene            complement(3300..3551)
                     /locus_tag="VGQ24_13930"
     CDS             complement(3300..3551)
                     /locus_tag="VGQ24_13930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455993.1"
                     /translation="MALLARTPASAPWALSGDYRVNWLMVLGDTAAALDAVDRLGTRP
                     TPNGVLTLWNPPLDPIRDHPRFQATLQRLWLPFHGRGQP"
BASE COUNT          627 a         1211 c         1237 g          610 t
ORIGIN      
        1 gctgctcgcc cccagcatgt ggcccagccg gctgcagttt gcccagccag gggctcgtcc
       61 aagctgcgcc gctgggtcag gacagcggcg atgccgcgac gttccgcgcg aattccgata
      121 ggtgcttgac tctgacggac cgccttccca agttgtgggc ccatgcgtac gcacccgtgg
      181 cagactacct cgatgtgtag cccccgttcc atgtgtgcgg gcgggggtgt ggtatatgcg
      241 cgtcgctgaa tcctctcatg cgtctcgcga ttcgcagtac ctcacccacc ttgcctggtg
      301 ggtgttttgt ttccggaccg tttcgatttc acacgcaggt tgtgatgacc aaaggagtcg
      361 ccgatgaata cttcaatcgc gcaggaacag cgaagctaca tcacggtggg ccaggagaac
      421 tccacctcca tcgagctcta ttacgaagac cacggctcgg gcaagccggt cgtgctgatc
      481 cacggctggc cgctgagcgg ggcatcctgg gagaagcagg tcgcggctct cctcgcggcg
      541 ggacaccgcg tcatcacgta cgaccgccgc ggattcggcc ggtcgagcca gccgtccatc
      601 ggctacgagt atgacacctt cgccgaggac ctgagcaagc tgctgactac gctcgacctg
      661 cgggatgtcg cgctggtggg cttttcgatg ggcggtggcg aagtggcgcg ctatctcggc
      721 gcgcacggct cggatcgcgt acggaaggcg gtgttcctcg ccgccgtgcc gccgttcctg
      781 ctcaagacgg cggataaccc gctcggagtg gatgggagcg tcttcgacgg catcaagcag
      841 gcgatcgtga acgaccgccc ggccttcctg acggaattcc tcaagaactt ctacaacgtc
      901 gacgagttgc gcgggaagcg catcagcgac caggtcgtcc agcagagctg gaacgtggcc
      961 gccggcgcct cggccaaggg ctcgcttgac tgcgtgacgg cgtggtacac cgacttccgg
     1021 aaggacatcc cgaagatcga cgtcccgacg ctcatcgttc atggcgacgc cgaccggatt
     1081 ctgccgatca cggccaccgc cgagccgctg gccaaggcgg tgaaggacgc gcgcaaggtc
     1141 gtgatccagg gcggcccgca cggcatcacc tggacccacg cggaccaggt gaacaaggag
     1201 ctcctggcgt tcctgaagta ggccgcgacg aacctgcacg ccccgccgat gtccttcggc
     1261 ggggcgtgca ggtcgagcct tcatctcccc gctggctagc ggctcgccgc cggtgtagcc
     1321 gtcgagggac atcgcgatcc cgaagcgcat ctatgccacg tcaggcctcc ggcctactgt
     1381 ttcgggggcg gggcgtccgc gctccacata tcgtagacga tcttccacga tccgtcggcc
     1441 tgcttcttga gcagctcgac gtacttccct acctctacgg gaaggggctt ggcgccggcc
     1501 ttcttcggcg taacgctcat gcgataggcc ccgactgcgt acgccaagtc gccgcggccc
     1561 tccacggcgg tggtggtgag ctcggtcggc ccggaaaagc tgttggtgaa atcgacccag
     1621 tacttcttgg ccgcttcgcc ctgacggatc ggctccatcg ggggcaggag gcttgcgtcg
     1681 gcggcgtaca aggccgcgac ggcgttgccg tcgccggccg aagccgcccg agcccactcg
     1741 gcatcaaccg cacggacggc ggcctcatcc tgggcggaca atccggccgg ggcggcagca
     1801 gactcgccgg ccatggtggt ggtctcgctc ttggcagcag gctggcaggc ggcgccccag
     1861 accatcagcg aggcgagacc caatagggcg gaacgggaca tgaggggctc ctttcggtgg
     1921 gcagaatcat cggcgacagc gcctacaggc cgaccgcttc gcgaccgacg gaacccccga
     1981 cccattgatg aggaagagca tgtcgggtcc tacgccccgc cgagtcgatc ggtggggcgt
     2041 tcagccgcgc tcgggaccgc agagtaaact acgacgaccc ggtgcgaatg agactgcgac
     2101 cgggtcgtgt ccctacgcta gggagcggtg gtaggggggt tgttcgggtt gttgttatgc
     2161 tgcccgctgc cacctccgcc acaattgccc gaattgccac tacaggcgaa tgcgggcgta
     2221 gtgtcggccg gatcgcccgg tgcggtcatc gagttcgagc agccggcgag gctcagcgcg
     2281 agaagcgctc caagggggag aagcgtccgc atggcgtgat ctccttatgt tgtggctgga
     2341 accggtgagt gcggggacag ctaggccagc atgcctcccg gtacgtggac tgtcaatgct
     2401 gccgcccccg agtagcacct ccagccgaac gtgcagcgtc tgcccaccct tctcgatgct
     2461 cgcagctagc aaggcggtac cctactgccg ccgagcgctt cggagatgtc ggggggtcat
     2521 ctcgggagga gaaaccatga gcatcatgtt ccctggtgag tcaccgcagt accgggcggc
     2581 ccgcgaccgg ctgctcgagc gggagatcga gctgcgccgt gtcatggagg ccgtggctgt
     2641 cgcgaggcgc gagctcccgg ccggcggggt cgttcccgag gactacgtgt tccaggaggc
     2701 cggtaccgac ggcaccgcat ccaacgtgac gctgtccgag ctgttcgcgc ccggcaggga
     2761 ctcgctggtg atctacaact tcatgttccc gcgcgaccct ggcgatgcga ggcccggagc
     2821 caaggccggc gagacagcgc ttctgccgct ggccgaaagt ccgtgcccct cgtgcaccgc
     2881 cctgctcgat cagctagacg gtgcggccga gcatgccagc cagagcatca acctcgcggt
     2941 cgtagccaag gcgccgctcc cacgcatcgt caccttcgcg aaggagcgcg gctggcggcg
     3001 gctgcggctg ctgagctcgg ctaacaacac ctacaaccgt gactaccacg gcgagaccgc
     3061 cgagggttcg cagaggccga tgctgaacgt gtttcaccgc gacagcggga cgatccgcca
     3121 tttttgggcg tcggagctct tctacgcgcc gagggacccg ggacaggacc cgcgtcacgt
     3181 gggcacgctc gagccgctct ggaacctgtt cgacctcacc ccagagggac gaccagcgga
     3241 ctgggatgag cagatgagct attagaagga acctcagcgg tgaacggcta cagccatcgt
     3301 cacggctgtc cccgaccatg gaagggcagc cagagtcgct gcagcgtggc ctgaaaccgc
     3361 ggatgatcgc ggatcgggtc gagcggggga ttccagagcg ttagaacgcc gttgggggtc
     3421 ggccgggtgc ccagccggtc taccgcatcg agcgcggccg ccgtgtcgcc cagcaccatg
     3481 agccagttca ctctgtagtc gccactgagg gcccaggggg cactcgccgg cgtgcgggcg
     3541 agcagcgcca agccctggcg gcggcgccca gaatccgccg cgccgcgaat cagcccggaa
     3601 tagaacggtc gtcgccggaa cgcccgcgaa tccgtcgtac ttcggctcta acagctactc
     3661 ggcccatcga acggctgagg ataga
//
LOCUS       DASYRV010000523         9749 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1150841, whole genome shotgun sequence.
ACCESSION   DASYRV010000523 DASYRV010000000
VERSION     DASYRV010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9749)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9749)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9749
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1150841"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1540
                     /locus_tag="VGQ24_13935"
     CDS             <1..1540
                     /locus_tag="VGQ24_13935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8455994.1"
                     /translation="PTGIPVGLYAAGGFDCPVYLDCDFLLGPEAAHLNITGVSGLATK
                     TSAVEFLLGSIFQTFPSHKGTVAALCFNVKGPDLCFLDQPATLADEDRRQYTRLGLQP
                     EPFANVRYYAPLKPDGVNLNTLRTHEALSGNTEPLVWGLREVLDYAEVVLNRDDIDAK
                     ADAFIDFLAERVVGREYQDEMLRRKPFLVQSFADLEEFFRAIFDFMELLGKGGEVWKT
                     HHVATIRKVRNRLSNISTRSKGLVTDDGIASDLPWGRFEDRSVHVIDVAGLDPLAQDL
                     VFARVVSKLREHLERRDLGVDHVVVFVDELNKYAPADGPDTYVRKMLLDLSERGRYLG
                     LVLFSAQQFRSQVQRRVVGNAGTAIYGRMDSDELATPGYGTLSPATKIKLATLPKGEL
                     MLRHPHFTQPIFVKFPRPAVLNSREGIERFPPAGELPFIEAVVRQMRRLDRRVSSEAV
                     RALIEGRRDEDVRRALSATRRERPADAYAFFTACLGRRVTGEVVSARRGIPALKHADD
                     SYGG"
     gene            1591..2769
                     /locus_tag="VGQ24_13940"
     CDS             1591..2769
                     /locus_tag="VGQ24_13940"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease SbcCD subunit D"
                     /protein_id="HEV8455995.1"
                     /translation="MKLAHIADPHLGIRQYHRQTSAGINQREADVAQAFRAAIDGVLA
                     ARPDVVVFAGDLFHSVRPSNSAIVFAFRQFQRLREALPNAPVVLIAGNHDTPRTVETG
                     SILRLFEELGVDVATDEPRRLVYPELDLSIFAVPREAILSAEPPALQPEGPQKHQVLV
                     AHFEVEGEYPVGHVATEYGGAVISRRELHLEDWTYVALGHYHTQHQVAKNAWYAGSLD
                     FIGPNIWGEAADQADHGSHGKGWLLVDLETQRVERRPVPAARAVLDLEPVRAEGKSAE
                     AIDALIAERIASAPGGISDQIVRLRVFDIPRYVARELNHAEVRRFKAEALHFQLDFRR
                     PELHRTTGVGAPGRRQTLPELVSSYLEGRPLPAELDRAAFVRLGRELMDRVERDLAGG
                     "
     gene            2769..5189
                     /locus_tag="VGQ24_13945"
     CDS             2769..5189
                     /locus_tag="VGQ24_13945"
                     /inference="COORDINATES: protein motif:HMM:NF024867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC family ATPase"
                     /protein_id="HEV8455996.1"
                     /translation="MRIDRLRLQNFRQHENTEIEFGPGLTGLIGPNGAGKTTLLEAIA
                     WAMYGMPAARGSRETLRRRGASPKARVAVEVDFTLGAHRYRVVRSLNNAELYQDGDPA
                     AIANSIGAVTERITRLLGMTRDQFFNTYFTGQKQLAVMAAMSAPERAQFLSQVLGYER
                     LRIGQERLKEKRSSLRARLEGLRAGLPDAAELKAARSEADNRLEAAARAEQAAAIASE
                     AAEQRLAAIRPQWEKLQHLREAAMALEAEIKLAEQKAVATTERLARLEHEAAEAAAAR
                     QKLDEVRRRLTPLPALREEAQALERQAEAYAARKSYQAQLDEVRAHLGSIQERISRVP
                     SKQLLDQALDRVNAARASLTAASLESEEQRTVWVRDTQDAKTKRQGLLDHYQELKEQR
                     QRIVKAGAEGVCPTCARPLGGEYAKVLELLDRQVEEVRSNGNYYKQRIDQLQQEPATL
                     ADIDAQKVALERELSEATAQQGRLHAQAHEAGPLQEEQKRLLLRVGELEGALEGLADS
                     YDQARHEAVVRDTRTLEPLALQAERFRVVAERSEAVAVELQGARAAAAEIAGAMADLR
                     TRLAALEYSETTFKNVQDTEQAAERARRETELALVRAKAERSAAGEAVEAVIRRQAER
                     DERERAATETAGELALHQELDRALTDLRNDLNSSLRPDLSDLASGFLSDLTHGRYVEL
                     ELDEDYSATVLDDGDPQTVISGGEEDIANLAFRLAISQMIAELAGQPLSLLILDEIFG
                     SLDDAHRSAVTDLLRSLADRFSQVILVTHIESLRDSVDHVVRVGFDQATGVATVRDEQ
                     QGDHDVAA"
     gene            5176..6135
                     /locus_tag="VGQ24_13950"
     CDS             5176..6135
                     /locus_tag="VGQ24_13950"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEV8455997.1"
                     /translation="MWRPDRSVRGPDRPTLRDIESLNQVFADAFTDRYSRDGLVGVRV
                     PQLNTLVWRYALEDAGDGSMVWRDVDGQMVGFNMVHRSGTEGWMGPLAVRPDRQGEGI
                     GSAMVRTGIEWLRGQGATTIGLETMPRTVDNIGFYSRIGLVPGHLTVTLVRDVPRRAA
                     GTAETLSSSGKAFEQRLEECRALTDRLLPGVDFTRELALTRELGIGDTTLCRDGRSLF
                     GFALWHSTPLAAGRPKDELRVLKLVAADPPTFERLVQAIQLSAVNERVSRIAIRCQTE
                     FTQPYLRLIDLGYRVHWTDLRMLLQGFPQRFPGEGIVMSNWEI"
     gene            6310..8319
                     /gene="asnB"
                     /locus_tag="VGQ24_13955"
     CDS             6310..8319
                     /gene="asnB"
                     /locus_tag="VGQ24_13955"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HEV8455998.1"
                     /translation="MCGIVGFLGTAGGGEAALASIAARMSACLTHRGPDDSGVWVDES
                     SGLGLGHRRLSILDLSPTGHQPMISHCGRYVITFNGEIYNYIDIRRELDAGGAAPGWC
                     GHSDTEVILAAIARWGIGRALECMTGMFALAVWDRADRTLHIARDRLGEKPVYYGWLD
                     GTLVFASELKALRVHPRWKGDIDRGALSLFLRHSYVPAPYSIYQGIRKLTPGTFLSAR
                     PDGSTKQTIYWSAREVAERGAAEPFAGTDTEATEMLERLLGRAVGRQMVADVPLGAFL
                     SGGVDSSTVVALMQAQSDRPVKTFTIGFREAGHNEAEHAKAVARHLGTDHTELYVTPA
                     EARDTIPRLPALYDEPFSDASQIPTLLVAQLARRNVTVSLSGDGGDELFGGYNRYFIG
                     RGLWGSVGWLPRPVRSVAAAGITAISPAQWDRFLARFMALWPGHLSYGNPGEKLHKLA
                     LILAARDPDEIYRGLTSQWKNPASVVLSGGEPVTTGSDRSQWATLSDFTQRMMFLDLI
                     TYLPDDILVKVDRAAMGVSLETRVPMLDHQVVEFAWRVPLSLKIRDGQGKWLLRQVLY
                     KYVPPELIERPKAGFYVPIADWLRGPLRGWAESLLSEARLRGEGFFDATVIRNSWNQH
                     LSGRRDWQQALWNVLMFQAWFQAESEPRHREPERPPVLSTMPLTT"
     gene            complement(8369..9493)
                     /locus_tag="VGQ24_13960"
     CDS             complement(8369..9493)
                     /locus_tag="VGQ24_13960"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEV8455999.1"
                     /translation="MKIVYIVTRAEPIGGAQVHVRDLACALLGRGHQPIVLTSGRGTY
                     TEALDAAGVQTITLGSLQAPINPLRDLRALYEIRALLKTLRPDLVSTHSSKAGVLGRI
                     AARSLGIPVIFTAHGWAFTPGIPSRQAAMYTWVERLAAPLASRVIAVSEFDRELAVAR
                     RVVPSQKLVTIHNGMPDIGPELRADPSRSPVRLAMVARFEPQKDHTTLFHALAGLMPE
                     AWSLDLIGDGPLQPKAEALGHRLGLADRIRFWGQRMDVDARLAEAQVALLITNWEGFP
                     RSILEAMRAGLPVVASAVGGVAESVRDGETGFTVSRGNVAGLRRRLKQLLADAGLRTR
                     MGQSGRQRYEDHFTLSRTIEKTLAVYQELVATDPKRNRVG"
BASE COUNT         1730 a         3141 c         3138 g         1740 t
ORIGIN      
        1 tcccaccggt atcccggtcg gactctatgc tgccggcggc ttcgactgcc cggtatacct
       61 ggactgcgat ttcttgctgg gccccgaggc cgcccacctc aacatcaccg gggtatccgg
      121 cctcgcaacc aagaccagcg cggtcgagtt cctcctgggc agcatcttcc agacgttccc
      181 ctcgcacaag ggaaccgttg cggccctttg cttcaacgtg aaggggccgg acctctgctt
      241 cctggatcag cccgcgacgc tggcagacga ggatcggcgg cagtacaccc gccttgggct
      301 tcagccggaa cccttcgcca atgtccggta ctacgccccg ctgaaacccg atggggtgaa
      361 cctgaatacg cttcggaccc atgaggcact ctccgggaat accgaaccgc tcgtctgggg
      421 cttgcgtgaa gttctggact atgcggaggt cgtgttgaac cgggacgata tcgacgcgaa
      481 ggccgatgcc ttcattgatt tcctggcgga gcgagtcgtg ggccgggagt atcaggacga
      541 gatgctccgc cgaaaaccct tcttggtaca aagtttcgct gacctggagg agttcttccg
      601 cgccatcttc gatttcatgg agttgctcgg taagggtggg gaggtgtgga agacgcacca
      661 tgtagccacg atccggaagg tgcggaaccg cctcagcaac atcagcactc gatccaaggg
      721 cctcgtcacc gatgacggga tagccagtga tctgccatgg gggcgcttcg aggatcgcag
      781 cgtacatgtc atcgacgtgg ccggtctcga tcccctcgcc caggatctcg tctttgcccg
      841 ggtcgtttcc aagctcaggg aacatctcga gcggcgagac ctcggcgtag accatgtcgt
      901 tgtgttcgtg gatgagctca acaagtatgc gcccgccgac ggccccgaca cctacgtgag
      961 aaagatgctg ctcgatctgt ccgagcgggg acgctatctg ggcctcgtgc tcttctcggc
     1021 ccagcaattc cgatcgcagg tgcagcgcag ggtcgtaggg aacgcgggta cggcgatcta
     1081 cggccggatg gattccgacg agctcgccac gcccgggtac ggcaccctct cccccgcaac
     1141 caagatcaag ctggccacgt tacccaaggg cgagctgatg ctccgccacc cgcacttcac
     1201 ccagccgatc ttcgtcaagt ttccccggcc agccgttctc aacagccggg aaggcatcga
     1261 gcgctttcct ccggcggggg agcttccctt catcgaggcc gtcgtgcgcc agatgcgaag
     1321 gctcgaccgc cgggtgtcat cggaggcggt tcgagctctc atcgaaggcc gccgcgacga
     1381 ggatgttcgg cgagctctct cggccactcg gcgcgagcgc ccggccgacg catacgcttt
     1441 tttcaccgcc tgtctcggcc gccgggtcac tggtgaggtc gtcagcgccc gacgggggat
     1501 tccagccctc aagcacgccg acgattcata cgggggatag ccacgcggta agttcttgct
     1561 ctttcgcgct tttgcgccca ttctccaccc gtgaaactgg cccacattgc ggacccccac
     1621 ctgggcatcc ggcagtatca ccggcaaacc tcggcaggta tcaatcaacg ggaagccgat
     1681 gttgcccagg ccttccgcgc cgccattgac ggcgtcctcg ccgctcggcc cgacgtggtc
     1741 gtcttcgcgg gcgatctctt tcattccgtc cggcccagca attccgcgat cgtctttgcc
     1801 ttcagacaat ttcagcgact ccgcgaagcg cttccaaacg ccccagtggt gctcatcgcc
     1861 gggaaccacg acacccctcg cacggtagag accggttcga tcctccggct attcgaggag
     1921 ctgggcgtcg atgtggccac cgacgagcca cgccgcctag tctatcctga gctcgacctc
     1981 agcatctttg cggtacctcg cgaggcgatc ctatccgctg agccacccgc gctccaaccg
     2041 gaaggccccc agaaacacca ggtgctcgtg gcccacttcg aggtggaggg ggagtaccct
     2101 gtcggccatg tcgccacaga gtacggtggc gcggtcatca gtcgccgaga attacacttg
     2161 gaggattgga cctacgtcgc cctggggcac taccataccc agcaccaggt ggccaagaat
     2221 gcctggtatg ccggctccct cgacttcatc ggacccaaca tctggggcga ggccgccgac
     2281 caggccgatc acgggtccca tggcaagggg tggctactcg tcgatctgga gacccagcgg
     2341 gtcgaacgcc gcccggtgcc cgcggctcgg gcggtcctcg atctcgagcc ggtgagggca
     2401 gagggcaagt ccgcggaagc gattgacgct ctgatcgccg agcgcattgc ctccgctcct
     2461 ggtggcatct ccgaccagat cgtccggttg cgggtgtttg atattccgcg gtatgtggct
     2521 cgcgagctga accacgcgga ggtgcgaagg ttcaaggccg aggccttgca cttccaactc
     2581 gacttccgga gaccggagct ccatcggacg accggggtgg gagcaccggg ccggcggcag
     2641 accctgccgg agctggtcag ttcctatctg gaagggcggc cgctccccgc cgagctcgat
     2701 cgggcggctt tcgtgcggct ggggcgggaa ctgatggatc gtgtcgagcg cgacctggcg
     2761 gggggctgat gcggatcgac cgcctgcgtc tgcagaactt ccggcagcac gagaacaccg
     2821 agatcgagtt tggtcccggt ctcaccggcc tcatcggtcc taatggcgcc ggcaagacca
     2881 cgctcctcga ggcgatcgcc tgggccatgt acggaatgcc ggcggcgcga ggaagtcggg
     2941 agactcttcg acgccgcggt gcgtcgccga aagccagagt cgcggtggaa gtggacttca
     3001 cgctcggagc ccatcggtac cgcgtcgtgc gttccctcaa caacgccgag ctctaccagg
     3061 atggagatcc ggcggccatc gccaacagca tcggcgccgt caccgagcgg atcacccggc
     3121 tcctgggcat gacccgcgac cagttcttca atacctactt caccggccag aagcagctcg
     3181 ccgtcatggc ggcgatgagc gcgcccgagc gggcccagtt tctctcccag gtccttggct
     3241 acgagcggct ccgcatcggg caggagcgat tgaaggaaaa gcgatcgtca ctgcgcgccc
     3301 ggctcgaagg actgcgggcc ggacttcctg acgctgcgga gttgaaggct gccaggtccg
     3361 aggccgacaa ccgcctggag gccgccgcta gggcagagca ggctgctgcc atcgccagcg
     3421 aagccgccga gcagcgcctg gctgccatcc gtccccagtg ggagaagctg cagcacctgc
     3481 gcgaagcggc aatggccctc gaggcggaga tcaagctcgc tgagcagaag gcggtagcga
     3541 caacggagcg ccttgcgcgg ctcgagcacg aggcggcgga ggcagcagcg gcacggcaga
     3601 agctggatga ggtgcgtcgg cgtctcacgc cacttcccgc gcttcgggaa gaggcgcagg
     3661 cgctggagcg tcaggccgag gcgtacgcag cccgcaagag ctaccaggct cagctggacg
     3721 aggtgcgggc acatctcggc tccatccagg aacgaatctc tcgggtaccc tcgaagcagc
     3781 ttctcgacca agcgctcgac cgagtcaatg ctgcacgcgc ttcgctgacg gccgccagtc
     3841 tcgagtcgga agagcaacga actgtctggg ttcgcgatac ccaggatgcc aagaccaagc
     3901 ggcaaggtct cctcgatcac taccaggagc tgaaggagca gcgtcagcgc atcgtgaagg
     3961 cgggcgccga aggagtctgc cccacctgtg cccgccctct cggtggggag tacgccaagg
     4021 tgctcgagct gcttgaccgc caggtcgagg aggtgcgctc caacggcaac tattacaagc
     4081 agcgaatcga ccagctacag caggaaccgg cgaccctggc cgatatcgat gcccagaagg
     4141 ttgcgctgga acgcgagctc tccgaggcca ccgcacagca gggacgactc cacgcccagg
     4201 cccatgaagc cggtcctctg caggaggagc agaagcggct gctgctgcgt gtcggcgagt
     4261 tggaaggggc tctcgagggg ctggccgatt cctacgacca ggcccggcat gaggcggtcg
     4321 ttcgcgacac ccggactctc gagccgctcg ccctgcaggc agagcggttt cgggttgtgg
     4381 cggaacggag cgaggcggtc gccgttgagc ttcaaggcgc gcgggccgcc gccgccgaga
     4441 tcgccggggc catggccgac ctgaggaccc gcctggcggc cctcgaatac agcgagacga
     4501 cgttcaagaa cgttcaggac actgagcagg cggcggagcg ggcgcgccgc gagactgagt
     4561 tagccctggt gcgcgcgaaa gccgaacgga gtgccgcggg cgaggcagtg gaggcagtta
     4621 ttcggcgtca ggcggagcgt gacgaacggg agcgggcggc tactgagacc gcgggcgagc
     4681 ttgcgctgca ccaggagctg gaccgcgcgc ttaccgatct gcgaaacgat ctcaattcga
     4741 gcctgcgtcc cgacctctcc gacctcgcat ccggtttcct cagcgacctt acccatgggc
     4801 gctatgttga gctcgagctc gacgaggact attccgctac ggtgctcgat gatggtgatc
     4861 cccagaccgt catctcgggt ggcgaggagg acatagccaa tcttgcgttc cggttggcga
     4921 tcagtcagat gatcgcggag ctggcggggc agccgctgtc cttgctcatc ctcgacgaga
     4981 tcttcggctc actcgatgat gctcaccgca gcgccgtcac tgacttgctc cgaagcttgg
     5041 ccgaccgctt ctcccaagtc atcctcgtca cccacatcga atcgttgcgc gatagcgtcg
     5101 accacgtggt acgggtgggc ttcgatcaag caaccggcgt cgccaccgtg cgagacgagc
     5161 agcaaggaga tcacgatgtg gcggcctgat cgaagtgtcc gcggcccgga ccggcccacc
     5221 ctgcgggaca tcgagtcgct caatcaggtc ttcgctgacg cgttcaccga ccgctacagt
     5281 cgggacggtc tggtgggtgt gcgggttccc cagctcaaca ctctggtgtg gcgctacgca
     5341 ctggaagatg ccggcgatgg atcgatggtc tggcgcgacg tcgacggcca gatggtcggg
     5401 ttcaacatgg tgcaccgctc ggggacggag ggatggatgg ggccactggc agtacgcccc
     5461 gaccgtcaag gtgagggcat cggatcggcc atggtgcgca ccggaatcga gtggctgcgg
     5521 gggcagggag ccacgaccat tggcttggag acgatgccca ggaccgtaga caacatcggg
     5581 ttttacagcc ggatcggatt ggtacccggg catctcaccg tcacgctggt gcgtgacgtg
     5641 ccccggcgcg cggcgggcac agccgagacg ctctcgtcgt ccggaaaggc ctttgagcag
     5701 cggctggaag agtgccgtgc gctcaccgat cgcctccttc cgggcgtgga ctttacccgt
     5761 gagctcgccc tcacccgcga gctaggtatc ggagatacca cgctctgccg ggacggacgg
     5821 tccctgttcg ggttcgccct gtggcattcg actccactag ccgccggacg gcccaaggat
     5881 gagctgcggg tcctcaagtt ggtggcggcg gacccgccaa ccttcgagcg tctggtgcaa
     5941 gcgatccagc tttcggcggt caatgaacgg gtgagccgga tcgccatccg ttgccagacc
     6001 gagttcaccc agccgtacct ccgtctcatc gacctcgggt atcgggttca ctggactgat
     6061 ctccggatgc tgctccaggg cttccctcag cgcttccccg gcgagggtat cgtgatgtca
     6121 aattgggaga tctgatccag tctctttccc ctggattccc gcggcgtcgc ccgagcccca
     6181 ggcaccacat ttgcaagtcg cgcgcaagac gttacccgcc ggttcggggc gattacactt
     6241 caccggtgct ggcagtgccg agcccactgc caggcgctca gctctagagc tcccttaggc
     6301 gactcaacta tgtgcggcat cgtcggattc ctgggcaccg ccggcggcgg ggaagctgct
     6361 ctcgcgagta tcgccgcgag gatgtctgcc tgtttgaccc acaggggacc ggacgactcc
     6421 ggggtatggg tcgacgagag cagtggcctt gggctcggtc accgcaggct gtccatcctc
     6481 gacctgtcgc cgacaggtca tcagccgatg atttcgcact gtggccggta cgtgatcacg
     6541 ttcaatggcg agatctacaa ctacatcgac attcgccgcg agctcgacgc cggcggtgcc
     6601 gcgcccggct ggtgcggcca ttccgacacc gaagtcattc tcgccgcaat tgcgcgttgg
     6661 gggataggtc gcgcgctcga atgcatgacg ggcatgtttg cgctcgccgt ctgggatcgg
     6721 gcggacagga cgttacacat tgcccgtgac cgtttgggcg agaagccggt ctattacggc
     6781 tggttggacg ggaccctcgt ctttgcctcg gagctcaaag cactgcgagt gcatcctcgc
     6841 tggaagggcg acatcgacag gggtgcactg tccctcttcc tgcggcacag ctacgtcccg
     6901 gcgccgtatt cgatctacca aggcatacgc aagctgacgc ccggaacgtt cctttcggcg
     6961 cggccggacg gctcgaccaa gcaaacgatc tactggtcgg ctcgcgaggt cgccgagagg
     7021 ggcgccgccg agccgttcgc cgggaccgac acagaagcaa cggaaatgct ggagcgcttg
     7081 cttggccgtg cggttggtcg gcagatggtg gccgatgtac cactcggtgc gtttctctcc
     7141 ggtggagtgg actcctccac agtcgtggcg ctgatgcagg cgcagagcga ccgtccggtg
     7201 aagaccttca ccatcgggtt tcgggaagcg ggtcacaacg aggccgagca cgccaaggcc
     7261 gtggcacgcc atctcggtac cgaccacacc gagctttatg ttacccccgc agaggcaagg
     7321 gatacgatcc cccggctccc ggcgctttac gatgaacctt tctccgatgc gtcgcagatt
     7381 ccaaccctcc tggtggcgca gctggcgcgg cggaacgtga ccgtaagctt gtccggtgat
     7441 ggcggcgacg aactgttcgg agggtacaat cgctatttca tcggccgcgg cctctggggc
     7501 agcgtaggct ggctgccacg tcccgttcgc agcgtcgctg ccgctggaat cactgccatc
     7561 tcgccggcgc agtgggaccg ttttctcgcg cgcttcatgg cgctgtggcc gggtcacctc
     7621 agctatggta atcccggcga aaaactgcac aagcttgccc tgattctggc cgcccgtgac
     7681 ccagacgaga tttaccgcgg gctgacctcc cagtggaaga atcccgcctc ggttgttctc
     7741 tccggcggcg agccggttac cacgggcagc gatcgttccc agtgggcaac gctgtccgat
     7801 ttcacccagc gcatgatgtt tctcgatctc atcacctacc tcccggatga catcctggtc
     7861 aaggtcgatc gcgcggccat gggggtaagc ctggagacgc gcgtgccgat gctcgaccac
     7921 caggttgtcg aattcgcctg gcgcgtaccg ctctccttga aaatccgtga cggccagggg
     7981 aaatggctgc tccgtcaggt gttatacaaa tacgtcccac cagaactcat cgaacggccg
     8041 aaggcgggct tttatgtacc aatcgccgat tggcttcgag ggccgctgcg gggctgggcc
     8101 gaatctctgc tgagtgaggc acggctgcgg ggggagggtt tcttcgatgc taccgtgatc
     8161 cgcaactcgt ggaaccagca cctttcgggc aggcgggact ggcaacaagc gctgtggaac
     8221 gttttgatgt ttcaggcgtg gttccaggcg gagagcgagc ctcgccacag ggaaccggag
     8281 aggccgcctg ttctttccac catgcccctg accacttgac tgcaaatcgg gtggacgctc
     8341 gagatccgct ggcaccagga cccacgactc accctactcg gttacgcttg ggatcggtag
     8401 cgacgagctc ctgatagacc gccagagtct tttcgatggt gcgactgagg gtgaagtgat
     8461 cctcgtagcg ttggcggcca ctctggccca tgcgggtgcg caaccccgca tcggccagca
     8521 actgcttcag ccgtcgtcgc agccctgcga cgttgccccg agaaaccgtg aagcctgtct
     8581 cgccgtcccg caccgactcg gcgacacctc cgaccgctga ggccacgacc ggaagccctg
     8641 cccgcatcgc ctccagtatg ctgcggggaa acccttccca attggtgatg aggagtgcca
     8701 cctgcgcttc ggccaatctt gcgtcaacat ccatccgctg gccccaaaac cgaatccgat
     8761 cggccaggcc gaggcggtga cccaacgcct ccgccttcgg ttgcaagggt ccgtcgccga
     8821 tcagatcgag actccacgcc tcaggcatca gcccggcgag tgcgtgaaat aaggttgtgt
     8881 gatccttctg cggctcgaat cgggccacca tcgcgaggcg gaccggtgac cgggacgggt
     8941 ccgcacgcag ctcggggccg atgtcgggca tgccgttatg aatggtcacc agcttttggc
     9001 tggggaccac gcggcgcgcc accgccagct cgcgatcgaa ttcagagacc gcgatgactc
     9061 tggacgcaag cggtgcggct aaccgctcga cccaggtgta catcgcagcc tgacgggacg
     9121 ggatgcctgg ggtgaaggcc cagccgtgcg ccgtgaagat cactggaatg ccaagactcc
     9181 gggctgctat ccggcccaga acgccggcct tcgatgagtg ggtggacacc aggtccggac
     9241 ggagcgtctt cagcagggcg cggatctcat agagggcgcg cagatctcta agggggttga
     9301 tgggagcctg gagactgccg agcgtaatcg tctgaacgcc cgcggcatcc agcgcttcgg
     9361 tatacgttcc gcgtccactc gttagcacga ttggttggtg accccgaccg agaagcgcgc
     9421 aagccaggtc gcgcacatgg acctgggctc caccgatggg ttcggcgcgg gtcacgatgt
     9481 aaacgatctt cacgcggtag gactcggccc tcttcctgcg gcaagcatca gctccggccc
     9541 cccggttacg gacgtccctt cgatcataca tccgagcacc ccatggagct ggctcgagtg
     9601 tacgctggag tctcgcgagc cgacaattat atcggcagat aagccctccg ggaactgctg
     9661 gagggaggtg ggcgtggagt catgtcggac cgtgcatgcc agctccaaca tgtcaaagat
     9721 accgacagta ttttgttaca ttcaacagc
//
LOCUS       DASYRV010000524         2143 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2401946, whole genome shotgun sequence.
ACCESSION   DASYRV010000524 DASYRV010000000
VERSION     DASYRV010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2401946"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            116..1681
                     /locus_tag="VGQ24_13965"
     CDS             116..1681
                     /locus_tag="VGQ24_13965"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEV8456000.1"
                     /translation="MAGRAPYTRLSSDRGKLSESIPNQRAEEEEYFERQGWPWDESLY
                     FTDNDLSASKYATKTRPGYLELLAAIRAGRVELILVTEVSRLFRNLADAIELLNLVRS
                     TSLRWVETTGGARYDLTTVQGEHNLLEAVVGASRESGNTSDRVKRAKRASAREGYWAG
                     GIRPYGYERVPVIDERGTVTRHSGLAPVPEEAAVVREVVERVFAGETLTRIAHDLNAR
                     GIPTAKGTGRWQDSLLRQLLGRPVLKGIRVHHGTEYPAKWPAIITPEEWERVQLILGG
                     VGASIGAPNKGVRSYLLTGFIECGVPGPNGKPCGAKLVGGRTRSPKELEAKRRYHCRV
                     FDNYGDKQGCGKLGRLADPVELAVSEAVLARYEGEDLAALVAPEAPEELHELAASLGE
                     DKQRLEQASRDRYRRRGDPLRLDEGQFLAIQAEIKDAMDAVKRRMARLEQGRALAEIP
                     VGMTLREAWDAADLGWRRTILGLVIVKVNLYAGRPGGRIWPAADSPLLERAKALGGPW
                     GFDPSKIDIQWKL"
BASE COUNT          378 a          608 c          785 g          372 t
ORIGIN      
        1 cggtcgcaga tcatgcactt gatgcgatgg tggaccatcg tcgaggaggc gatgatgtgt
       61 atttgcatat actgatctga gctagccatg gggtcagtcc ggcagggagg gaaggatggc
      121 ggggcgagca ccgtacacgc ggctctccag cgatcgcggc aagctgagtg agtctatccc
      181 gaaccaacgt gccgaggaag aagagtattt cgagcggcag ggctggccgt gggatgagag
      241 cctgtacttc acggacaatg acctgtcggc gtcaaagtac gcgaccaaga cccggcctgg
      301 ttatctggaa ctgctcgccg cgatccgggc gggtcgggtt gagttgattc tcgtcaccga
      361 agtctcgcga ctgttccgca accttgccga tgcaatcgag cttcttaacc ttgtccggtc
      421 aacctcgctg cgttgggtcg agacgaccgg cggtgctcgt tatgacctga ccacggtcca
      481 gggcgagcac aacttgctag aggctgtggt cggcgcgtct cgggagtccg gcaacacgtc
      541 tgatcgggtg aagcgcgcga aacgcgctag tgcccgcgag ggctattggg cgggtggaat
      601 ccggccctac ggctatgagc gtgtaccggt gattgacgaa cgcggcacag ttaccagaca
      661 tagcggactt gcacccgtac cggaagaggc ggccgtcgtg cgcgaggtgg tcgagcgggt
      721 atttgccgga gagacgctga cgcgaattgc acacgatctg aacgcccgtg gcattccgac
      781 cgcgaaagga acgggtcgct ggcaagacag cctcttgcgc cagctattgg ggcggccggt
      841 attgaagggc atccgagttc atcacggcac ggaatatccg gcgaagtggc cagcgattat
      901 cacgcccgag gagtgggagc gcgtgcaact catcctcgga ggcgtaggcg cctccattgg
      961 tgctcccaac aagggcgtcc gaagctatct gctgacgggg ttcatcgagt gtggtgttcc
     1021 tggtcctaac ggcaagccct gcggggcaaa gctggttggc ggcaggacga gatctcccaa
     1081 ggaactggag gcgaagcggc gttaccactg ccgggtattc gacaactacg gggacaagca
     1141 aggttgcggc aagctcggac ggctcgctga tccggtcgag ctggcggtga gtgaagcggt
     1201 attggcgcgc tatgagggcg aagacctcgc cgcgctggtg gcgcctgagg ctccggagga
     1261 gctgcatgaa ctggccgcgt cgctcggcga ggacaagcag cgactagagc aggccagccg
     1321 ggaccggtat cgccgccgcg gtgacccatt gcggctcgat gaggggcagt tcttggcgat
     1381 ccaggccgag atcaaggacg ccatggatgc tgtgaagcgt cgcatggctc ggctggagca
     1441 gggccgggcg ctggccgaga tcccggtggg gatgactctg agggaagcct gggatgcggc
     1501 tgatttgggc tggcggcgga cgatccttgg cttggtgata gtgaaggtga atctatacgc
     1561 cggccgcccg ggcgggcgca tctggcctgc tgccgatagt ccgctgctcg aacgcgcgaa
     1621 ggcgcttggt gggccttggg gcttcgatcc gtccaagatc gacattcaat ggaagctttg
     1681 acctgtcctg acaccagggc agcagctgcc tgctgatcgt ggccgccgct gctgcgtgct
     1741 cggcttggcg gcgcggcaat gaccgatgcg ggttcgggac tatcgtggcc gccgccgggt
     1801 ggcgccgggg ccccagtgct ggccgggcgg cggtgttcgg gtccaccgac aggccggagc
     1861 cgctgcccgg ccaggccgag caataagcga gtagcgattc gggcctgtcg gggcgggtgc
     1921 cgcagcgcgc cggcgatgcg acctggtcgt gtgggttgcc ggcggcgccg ggccgaggac
     1981 ggcgggggag gggccccgcc gcccgcaggg ccgagggccg ccggcctcaa acccgcgacc
     2041 gcttccgtgt caggaaaaaa ctagtctgga gggactcgct ggcacccaat atttccccac
     2101 gtgaatcgta ggcatggggt gtccgggaca gaccgctcgt gcc
//
LOCUS       DASYRV010000525         2103 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3231977, whole genome shotgun sequence.
ACCESSION   DASYRV010000525 DASYRV010000000
VERSION     DASYRV010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2103
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3231977"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1724)
                     /locus_tag="VGQ24_13970"
     CDS             complement(<1..1724)
                     /locus_tag="VGQ24_13970"
                     /inference="COORDINATES: protein motif:HMM:NF006129.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-requiring protein"
                     /protein_id="HEV8456001.1"
                     /translation="MAHTVSSFILHRLGDWGVKRIFGYPGDGINGFFAALEEAGERFE
                     LIRVSHEESAAFMACGHAKFTGEVGVCVATSGPGAIHLLNGLYDAKLDHQPVVAIVGQ
                     QSRKALGGSYQQEVDLLTLFKDVAGEYVHMVTDPAAARHVVDRAVRIAQAERTVTCII
                     LPNDVQELPAVETPQREHGTIHSGLGATAPRVVPTDGDLAHAAQILNEGNKVAMLVGA
                     GALGAAELVLQVADVLGAGIAKALLGKAVVPDTLPQVTGSIGLLGTRPSWELMSGCDT
                     LLMVGSSFPYSEFLPKEGQARGVQIDLDPRMLGLRYPMEVNLVGDTQETLRALLPYLR
                     PKADRSWRKRVEQSVAEWWDVLEARAKVPADPLNPQLVFWELSPRLPDRCILTSDSGS
                     AAFWWARDLKLRSGMLASLSGNLATMCPGVPYAIAAKFAFPDRAVIAAVGDGAMQMLG
                     INDLITVARYWKQWSDPRLIVLVLNNRDLNLVTWEMRVFAGNPEYPASQEVPDFPYAG
                     YAEQLGLKGIRVDTPEAVAPAWEEALAADRPVVYEAVTDPDVPPLPPHISLEQAKQFT
                     AMLLKGDP"
     gene            complement(1806..1934)
                     /locus_tag="VGQ24_13975"
     CDS             complement(1806..1934)
                     /locus_tag="VGQ24_13975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456002.1"
                     /translation="MPKNFRCNACGAEFDTKDELDTHNRTMHPTGTPAGTPGGTKR"
BASE COUNT          332 a          686 c          740 g          345 t
ORIGIN      
        1 tcggggtcgc ccttgagcag catggcggtg aattgcttcg cctgctcgag gctgatgtgc
       61 ggcggcaggg ggggcacgtc gggatcggtg accgcctcgt agaccaccgg ccggtcggcg
      121 gccagggcct cctcccaggc cggggcgacg gcttcgggcg tgtccacccg gatgcccttg
      181 aggccgagct gctcggcata acccgcatat gggaaatcgg gcacctcctg ggaggccggg
      241 tattccgggt tgcccgcgaa cacgcgcatc tcccaggtga ccaggttgag gtcgcgattg
      301 ttgagcacca agacgatgag tcgcggatcg gaccactgct tccagtagcg cgcgacggtg
      361 atcaggtcgt tgatgccgag catctgcatc gcgccgtctc ccaccgcggc gatcaccgcg
      421 cggtcgggaa aggcgaactt ggcggcgatc gcatagggca cgcccggaca catcgtcgcc
      481 aagttcccgg agaggctcgc gagcatgccg gagcggagct tgagatcgcg cgcccaccag
      541 aacgccgcgg aaccggaatc ggaggtgagg atgcagcgat ccggcaggcg gggcgagagc
      601 tcccagaaga cgagctgcgg attgagcgga tcggccggca ctttggcccg ggcctcgagt
      661 acgtcccacc attccgccac gctctgctcg acgcgcttgc gccaggagcg gtcggccttg
      721 ggccggaggt agggcaacag ggcacgcagg gtttcctgcg tgtcccccac caggtttacc
      781 tccatcggat agcgcaggcc gagcatgcgg ggatccagat cgatctgcac gccccgcgcc
      841 tggccttctt tgggaaggaa ctcggaatag gggaagctcg agccgaccat gagcagcgtg
      901 tcgcagccgc tcatcagctc ccaactgggc cgggtaccca gcagcccgat ggagccggtc
      961 acctgcggga gcgtgtcggg caccaccgcc ttgccgagca gcgccttggc gattcccgcg
     1021 ccgaggacgt cggcaacctg aagtaccagc tcagccgcac cgagggcacc ggcccccacc
     1081 agcatcgcca ccttgttgcc ttcgttcagg atctgggccg cgtgggcgag gtcaccgtcg
     1141 gtcggcacca cgcggggcgc ggtggcgccg aggccggagt ggatggtgcc gtgctcgcgc
     1201 tggggcgtct ccacggcggg gagctcctgc acgtcgttcg ggaggatgat gcaggtgacg
     1261 gtgcgctccg cctgggcgat tcgtaccgcc cggtccacca catggcgtgc cgcagcggga
     1321 tcggtgacca tgtggacgta ctcaccggcc acgtccttga agagggtcag caggtccact
     1381 tcctgctgat aggagcctcc cagcgctttg cgtgactgct gcccgacgat ggcgaccacg
     1441 ggctggtggt cgagcttggc gtcgtagagg ccattgagca gatggatcgc gccgggaccc
     1501 gaggtagcta cgcagacgcc cacctcgccg gtgaacttgg catggccgca ggccatgaac
     1561 gccgccgatt cctcgtgact cacccggatc agctcgaacc gctccccggc ctcctcgagg
     1621 gccgcgaaga agccgttgat gccatcgccc gggtagccga agatgcgctt gacgccccag
     1681 tcgcccaggc ggtgcaggat gaagctgctg acggtgtggg ccatatccct gggggttgga
     1741 ggattggagg ttagggggat gcgggggcgc ccgagggcgt ccccgcctcg cgccagtatg
     1801 gaggattacc gcttagtgcc acccggcgta ccggccggag ttccggtcgg atgcatggtg
     1861 cggttgtggg tatcgagctc atccttggtg tcgaactcgg cgccacaggc gttgcagcgg
     1921 aaattcttgg gcatcgagct actccttgtc gtgcggtcag ttaatcctcc ccgcggcgag
     1981 cggaccgcgc gctcggtcag gggcaagccg tcgcaagact ccccgggcgg ttccctccac
     2041 cccttccgct agcgtcggga agatcccgac cgctctggcg atttcatcga tccggccccg
     2101 gcg
//
LOCUS       DASYRV010000526         2671 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1153259, whole genome shotgun sequence.
ACCESSION   DASYRV010000526 DASYRV010000000
VERSION     DASYRV010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2671
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1153259"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2671
                     /locus_tag="VGQ24_13980"
     CDS             <1..>2671
                     /locus_tag="VGQ24_13980"
                     /EC_number="4.1.1.71"
                     /inference="COORDINATES: protein motif:HMM:NF008907.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="multifunctional oxoglutarate
                     decarboxylase/oxoglutarate dehydrogenase thiamine
                     pyrophosphate-binding subunit/dihydrolipoyllysine-residue
                     succinyltransferase subunit"
                     /protein_id="HEV8456003.1"
                     /translation="RTLDGLLQGNEGFYESAFTSFGLSAPAVAATVTQGVGVAGSADR
                     IERRSTDNLAHVAAAMALVKAHRTHGHLAAHLDPLGSEPIGDPALKPEPLGLTPEIMA
                     TIPTQVLRIFVPGETLADAFPNLQATYCGTIAYEVEHISSHEVRVWLREMIETGAHRK
                     PLSSDEKKKLLARLTQVEVFERFLHKAYLGQKRFSIEGLDAMVPMLDLTIESAADAGA
                     REVVLGMAHRGRLNVLAHVVGKPYQALFAEFEGSRPAADSDDPHDTTGDVKYHHGAEG
                     AYHTRSGRAVTVTLAANPSHLEFVGPVVDGRARATQTQRRGRDAIHDASVALPVVIHG
                     DAAFAGQGVVQEMLNLGSLDGYRTGGTYHLIANNQVGFTTDTRDARSTRHASDLAKGF
                     DIPIIHVNADDPEACLAAVRLAMAFREKFREDPIIDLVGYRRHGHNEADEPTYTQPLM
                     YARIKEHPTVRELYARTLAAEGVLTTDDAKAMYDADYQRLVDIQQSFKANLAKTTSQE
                     PPKPQRSTTGMDVETAVPADLLRALNDQLLSWPDGFTVNPKLARQLERRRSAMGSEGG
                     IDWAHAEALAFASLITEGVPIRLTGQDTERGTFSQRHLVLHDVNTGATVTPMKQLPGA
                     MAPFEVYNSPLSELAPLGYEYGYSAAAPEALVLWEAQFGDFINGAQVIIDQFLTSGLA
                     KWGLTTRLTLLLPHGYEGQGPEHSSARLERFLQLAAEGNIRVANCTTPAQYFHLLRRQ
                     AKVGRQRPLIVMTPKSLLRLPQASSVLSQLASGGFQPVIDDMAATATPDEVTRVVVCS
                     GKIYYELVAEAEKLTANRPAIVRLEQLYTFPAPEMRHTLEHYSNLKELVWVQEEPRNM
                     GAWHFVEEKLKDVMPPGAKLRYSGRPERASPAEG"
BASE COUNT          495 a          868 c          881 g          427 t
ORIGIN      
        1 ccgcaccctg gatggattgc tgcaggggaa cgaagggttc tacgagtccg cgttcaccag
       61 cttcggcctt tcggcgccgg ccgtcgcggc gacagtaact cagggcgtcg gggtcgccgg
      121 gtcggccgac cggatcgagc ggcgctccac ggacaacctg gcgcacgtcg ccgcggcgat
      181 ggcgctggtg aaagcgcacc ggactcacgg ccacctggcg gcgcacctcg acccgctggg
      241 cagcgagccg atcggcgatc cggcgctcaa gccggaacca ctcggcctga cgccggagat
      301 catggcgacg attcccaccc aggtgctccg gatctttgtg ccgggggaaa cgttggccga
      361 cgcctttccc aacctgcagg ccacctactg cggaaccatc gcgtacgaag tcgagcacat
      421 ttccagccac gaggtgcggg tctggctgcg ggagatgatc gaaaccggcg cccatcgcaa
      481 accactttcc agcgacgaga agaaaaagct gctggcccgg ctcacccagg tggaagtgtt
      541 cgagcggttt cttcacaagg cgtacctggg tcagaagcgg ttttcgatcg agggcctcga
      601 tgcgatggtc ccgatgctcg atctcactat cgagtcggcg gcggacgcgg gcgcgcgcga
      661 ggttgtgctg ggcatggcgc accggggccg gctcaatgtg ctggcccacg tagtcgggaa
      721 accgtaccag gccctctttg ccgagttcga ggggagtaga cccgcggcag acagtgacga
      781 tccgcacgac actacggggg acgtgaaata ccatcacggc gccgaaggcg cctatcacac
      841 cagaagcggg cgcgcggtta cggtcactct cgccgccaac cccagtcatc tcgagttcgt
      901 gggtccggtc gtggatggaa gggcccgggc gacccagact cagcggcggg gccgggatgc
      961 gatccatgac gccagcgtcg cgcttccggt cgtgattcat ggcgacgccg cctttgcggg
     1021 acagggcgtc gtccaggaga tgctgaacct cggatcactg gatgggtacc gcactggagg
     1081 tacctatcac ctgatcgcca ataaccaggt ggggtttacc acggacaccc gggacgcccg
     1141 ctccactcgg cacgccagcg acctcgccaa gggtttcgac attcccatca ttcacgtgaa
     1201 tgccgatgac cccgaggcct gcctcgccgc ggtccggttg gcgatggcct tccgggaaaa
     1261 gtttcgggaa gatccgatca tcgatctggt agggtatcgc cgccacgggc acaacgaagc
     1321 ggacgagccc acctacaccc agccgttgat gtatgcccgc atcaaggagc atccgacggt
     1381 gcgggaactg tacgccagga cgctggcggc ggaaggcgtc ctgacgacgg acgacgccaa
     1441 ggctatgtac gacgcggatt accagcggct ggtcgacatc cagcagtcgt tcaaagcgaa
     1501 tctggcgaaa accacctcgc aggagccgcc caagccgcag cgctccacca ccggaatgga
     1561 cgtagagacg gcggtccccg ccgacctgct ccgcgcgctc aacgatcagc tgttgagctg
     1621 gcccgatggc ttcaccgtga atcccaagct ggctcggcag ctggaacgcc gccggtcggc
     1681 catgggctcc gagggtggga tcgactgggc ccatgccgag gctctcgcct ttgcttcgtt
     1741 aatcacggaa ggtgttccga tccggctgac tgggcaggac accgagcggg gcactttcag
     1801 ccagcggcat ctcgtcctgc acgacgtgaa caccggcgcc accgtgacgc cgatgaagca
     1861 gctccccgga gcgatggcgc ccttcgaggt gtacaacagt ccgctgtcgg agctcgcgcc
     1921 gctgggttac gagtacgggt acagcgccgc cgcgcccgag gccctggtgc tctgggaagc
     1981 ccagttcggc gatttcatca acggtgccca ggtcatcatc gaccagttcc tgacctcggg
     2041 tctcgccaaa tgggggctca ccacccggct cactctgctg ctgccgcatg gatacgaagg
     2101 ccagggcccg gaacattcca gcgcgcggct ggagcggttc ctgcaattgg cggccgaggg
     2161 aaacatccgg gtcgctaact gcacgacgcc ggcgcagtac ttccaccttc tccgccgcca
     2221 ggcgaaggtg ggacgccagc gcccgctcat cgtcatgact cccaagagcc tgctccggct
     2281 tccgcaggcg agctcggtac tgagccaact ggcctccggt ggtttccaac cggtgatcga
     2341 tgacatggcg gctaccgcga cgccggatga agtcacccgg gtggtggtgt gcagcgggaa
     2401 gatctattac gagctggtgg cggaggcgga gaagctgacc gccaatcgcc cggccatcgt
     2461 gcgcctggaa cagctctaca ccttccccgc tcctgaaatg cggcacaccc tggagcacta
     2521 ttccaacctc aaggagttgg tctgggtcca ggaggagccg cgcaacatgg gggcctggca
     2581 ctttgtggaa gagaaactga aagacgtgat gccgccgggg gcgaagttgc gctacagcgg
     2641 ccgcccggag cgggcgagcc cggcggaggg a
//
LOCUS       DASYRV010000527         3245 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2817155, whole genome shotgun sequence.
ACCESSION   DASYRV010000527 DASYRV010000000
VERSION     DASYRV010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3245
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2817155"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1807)
                     /locus_tag="VGQ24_13985"
     CDS             complement(<1..1807)
                     /locus_tag="VGQ24_13985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456004.1"
                     /translation="MRLVSASGLWLWVMLLPSTISAQLAPPASGGSLDATYEQRYADL
                     KELQAVPNRVAQVSGLVIKRDAGQFTFENGKFYLLTPIGGRTVGAVFLGTGRMGFNPP
                     SRIEQERLARFQKTRSLDAPFSSVVLLFADSTLAELEAKLTFGPGQPPPEVRQRFKSS
                     LENLIDDDSKSLDPDLMSVFLNGESNGLFYAEVGRINGGSPLMFMINPGEVEGVSLSH
                     RVRRYGWTRQSEAICRFAPLGTNRGPEVSGERIRQASIRHYAIQTSLTQSSTGDLSFA
                     AGARLEITTNVPLGPWVAFSLFEKLKVDSARWEGGEPATVFKGKDARLLWVRLDRQLQ
                     PGEVRTMNLYYHGDLIDRFDDFFFIKSSAEWYPRPLEGRSLATFDLTFRSPKGKLLAS
                     VGDQLESSTAGQVTTSRWVTSGPIRNASFNLGFFKDYQIKEEGIPPVSVLISEDAHRR
                     LGGLRQKNMKETVGADVAKSLRFFQHVYGEVPAKRFFATEIPYFHGEAFPGLVHLSWW
                     TFQQTDQEGEDEVFRAHEVAHQWWGIGVDFTSYHDQWLSEGIADFSGLWYLQTVRKDN
                     AKYFGVLRRWRNSILEHTDNPGPIWLGYRTTSSKDS"
     gene            complement(2057..>3245)
                     /locus_tag="VGQ24_13990"
     CDS             complement(2057..>3245)
                     /locus_tag="VGQ24_13990"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEV8456005.1"
                     /translation="VFVNRLDGHMGLANSAALRAARITRATKDIRGGVIVRDPRTGEP
                     TGILKDEAMGPVMRAIPAPTGAQRDAALRRALAYAASKGVTAFAHVSVAPADLGTYLR
                     AKQAGALTARAALYFPLETWHAVADTVAKLGRGDDWVWIGGVKGYVDGSLGSTTALFY
                     SPYNDDPKTSGVLVTPEDSLRAWIGAADSVGLQVAVHAIGERANGLLLDIYDSVAKAH
                     GPRDRRFRIEHAQHLRRQDIARLAHSGVIASMQPYHAIDDGRWAEKRIGPERIKTTYA
                     FRSLLDNGAHLAFGSDWTVAPIDPILGIYAAVTRRTLDGKNPNGWVPDQKISVEEALR
                     AYTAGNAYGVFAERSRGKLAPGYLADLVVLDQDLTAIPPEAIERASVRATVVAGKVVY
                     SAR"
BASE COUNT          582 a         1020 c         1059 g          584 t
ORIGIN      
        1 tgctatcctt cgacgacgtg gtgcggtatc ccagccagat cggccccgga ttgtcggtgt
       61 gctcgaggat gctgttccgc caccgacgaa gcacgccgaa gtacttggcg ttgtccttcc
      121 gcaccgtctg gaggtaccag aggcccgaga agtcggcaat gccctcgctc agccactggt
      181 cgtggtagct ggtgaaatcc acgccgatcc cccaccactg gtgggctact tcgtgagcgc
      241 ggaagacctc gtcctcgccc tcctggtcgg tctgctggaa cgtccaccag gaaagatgaa
      301 ccaggccggg gaaggcctcg ccgtggaaat acggaatctc ggtggcgaag aaacgcttgg
      361 ccggcacctc gccgtagacg tgctggaaga accgcaggct cttggccacg tcggctccga
      421 cggtctcctt catgttcttc tgccggagac cacccagccg gcgatgcgca tcctctgaaa
      481 tgagcaccga gaccggcggg atcccctcct ccttgatctg gtaatccttg aagaacccca
      541 gattgaacga agcattccgg atcggaccgg aggtgaccca gcgcgacgtg gtcacctggc
      601 cggcagtact cgactcgagc tggtcgccga cgctcgccaa cagcttcccc ttgggactgc
      661 ggaaggtcag gtcgaaggtg gcgaggctcc tcccttccaa cggtcggggg taccactcgg
      721 ccgacgactt gatgaaaaag aaatcatcga agcggtcgat cagatctcca tggtagtaca
      781 ggttcatcgt ccgtacctcg ccaggctgca gctggcgatc gagcctgacc cacaggagcc
      841 gggcgtcctt ccccttgaag acggtggcgg gctcgccgcc ttcccaacga gccgagtcca
      901 ccttgagctt ctcgaagaga ctgaacgcca cccacgggcc caggggcacg ttggtcgtga
      961 tctcgagccg ggcacccgcc gcaaagctca ggtctccagt gctgctctga gtcagcgaag
     1021 tctggatggc gtagtgtcga atggatgcct ggcggatgcg ctcgcctgat acctccgggc
     1081 cccgatttgt gcccagcggt gcaaaccggc aaatggcttc cgattgacgg gtccatccgt
     1141 aacggcggac gcggtgagag agactcacgc cttcgacctc gccgggattg atcatgaaca
     1201 tgagcgggct tccgccattg atgcggccga cttcggcgta gaacaggccg ttcgactcgc
     1261 cattgaggaa tacgctcatg agatcgggat cgagcgactt gctgtcgtca tcgatcaggt
     1321 tttccaggct cgacttgaag cgttggcgca cttcgggcgg aggctgtccg ggtccgaacg
     1381 tgagcttggc ttcgagctcg gcaagggtgc tgtccgcgaa gagaagcaca acgctggaga
     1441 acggcgcatc cagtgatctg gttttctgga accgggccag ccgctcctgc tcgatacggc
     1501 tcggcgggtt gaaccccatg cgaccggtgc cgagaaacac agcgcccacc gtgcgcccac
     1561 cgatcggcgt gagcaggtag aacttcccgt tctcgaaggt gaactgtccc gcatctcgct
     1621 ttatgactaa tccactcacc tgcgccaccc gattgggcac cgcctgaagc tccttgaggt
     1681 cggcgtagcg ctgctcatat gtggcgtcga ggctgccgcc ggacgccggg ggggccagct
     1741 gggcggagat ggtggaggga agcagcatga cccagagcca caggccactc gccgagacca
     1801 gcctcatgga ttcctccgac aggcgtgagt tgggccctgc cacgcgttgg gaaggcggcg
     1861 cagggctgat tgcgagacag gtgtgttctt ggatgaaagg ggtgagctat tcgctgaact
     1921 tgggaggcgg cagtcggccg gtcaagtgga cttgcgtaag cggcgccgat gtttcatgag
     1981 gggtaccggc aggggtaact acctggcatt gtcgcatttc ggcgcgatac gagcccaatt
     2041 gcgacagccc cagggctcaa cgggcggaat atacgacctt gccagccact accgtggctc
     2101 gcacgctggc tcgctcgatg gcttcgggtg gaatggccgt gaggtcctga tcgagcacca
     2161 caagatctgc caggtagccc ggcgcgagct tgcctctgga ccgctcggcg aagactccgt
     2221 acgcgttgcc cgcagtatag gcccgaagcg cttcttccac gctgatcttt tggtcgggta
     2281 cccagccgtt tgggttcttg ccgtccaatg tccggcgggt gacggcggcg taaatgccga
     2341 gaatcgggtc gatcggggcc acggtccagt ccgagccgaa cgcgaggtgg gcgccgttat
     2401 cgaggagtga gcggaaggca taggtagtct tgatccgctc gggaccgatc cgcttctcgg
     2461 cccagcggcc atcgtcaatg gcatgatacg gctgcatcga ggctatgaca ccgctatggg
     2521 ccaggcgcgc gatgtcctgc cgccggagat gctgggcgtg ctcgatgcga aagcgccggt
     2581 ctcggggccc atgggccttc gccacgctgt cgtagatgtc gagaagcagc ccattcgcac
     2641 gctccccgat ggcatggacg gccacctgga gcccaaccga atccgcggcg ccgatccagg
     2701 cacgcaatga atcctccggc gtgaccagga cgcccgacgt cttgggatcg tcgttgtacg
     2761 ggctatagaa gagtgccgtg gtcgagccca gcgaaccgtc cacgtatccc tttacgccac
     2821 caatccagac ccagtcatcg ccacggccca atttcgccac cgtgtcggcc acggcgtgcc
     2881 aggtttcgag cggaaaatag agcgccgcgc gggcggtcag cgcgccggcc tgcttggcgc
     2941 gcagataggt gcccagatca gccggggcga cgctcacgtg cgcaaaggcc gtgacgccct
     3001 tggacgcagc gtacgccagc gcgcggcgga gggccgcatc ccgttgcgcg ccggtgggcg
     3061 ccgggatcgc tcgcatcacc ggtcccatcg cctcgtcctt gaggatgcca gtgggctcgc
     3121 cggtgcgcgg gtcacgcacg atcacgccgc cacgaatgtc cttggtggca cgcgtgatcc
     3181 tcgcggcacg gagcgcggcg ctgttggcga ggcccatatg gccgtcgagc cggttgacga
     3241 agacc
//
LOCUS       DASYRV010000528         2988 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3232393, whole genome shotgun sequence.
ACCESSION   DASYRV010000528 DASYRV010000000
VERSION     DASYRV010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2988)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2988)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2988
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3232393"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..211)
                     /locus_tag="VGQ24_13995"
     CDS             complement(<1..211)
                     /locus_tag="VGQ24_13995"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEV8456006.1"
                     /translation="MRLATKKPWAIDVSYFTPVKRPLYLTGMAVSVAQQGQGLGRLAL
                     EDARAVAQEWPAEAIRLDAYAAEAGA"
     gene            complement(417..1046)
                     /locus_tag="VGQ24_14000"
     CDS             complement(417..1046)
                     /locus_tag="VGQ24_14000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456007.1"
                     /translation="MQEIRRRNTRQRLLRAAILGTLGLVTPVAAPLALGQAKPEVPDL
                     SQVRSALRKYEDPYVAIHDGYFSTLGCIVIEQAGPAGHVPYLPGGMGVHFLNLSLLGP
                     VPDPNKPQVLIYEPDGAKLRLVAAEWFIPLSTGVKGRPTLWGRAFDGPMMGHPPLLPM
                     ELTHYDLHVWLYKTNPFGTFAPTNPEVTCTGHPYRLVEEAPKLVPEPKP"
     gene            complement(1098..1640)
                     /locus_tag="VGQ24_14005"
     CDS             complement(1098..1640)
                     /locus_tag="VGQ24_14005"
                     /inference="COORDINATES: protein motif:HMM:NF019320.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme NO-binding domain-containing protein"
                     /protein_id="HEV8456008.1"
                     /translation="MHGIIFAEFKKFVQATLPPGSWEQIGQRAGIGRLSNLASEVYPD
                     EELVALVTAAVELSGVPAPTLLEQFGEFIVPDLLKVYGGFVDRRWTALDLLANTEVVI
                     HRAVRLRDPRATPPELRVDRKSPSEVIITYASPRRLCSVAKGIMRGVGRQYKENLTIV
                     ETTCMHAGTAACTLVATLAE"
     gene            complement(1721..1981)
                     /locus_tag="VGQ24_14010"
     CDS             complement(1721..1981)
                     /locus_tag="VGQ24_14010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456009.1"
                     /translation="MDEDLTNLSRELLIEEIRKLRRGIRAHRDSTGHELCWHHPALWG
                     FLPEKQDPLPMVPEWPVFLRGCIRYRQSLDEQAPAAPRSAQP"
     gene            complement(2001..2546)
                     /locus_tag="VGQ24_14015"
     CDS             complement(2001..2546)
                     /locus_tag="VGQ24_14015"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEV8456010.1"
                     /translation="MPSPPDLREAIFAAWRTNNRVTLFLFEQLPSSLWSATIPGAPRR
                     TIRMIAGHIHNARCRWIKTLGKPHGLPVPPFVDRHRVGARQLLPALRRSGSGIGRLLE
                     LGCQHGGTIPPTKAYVWRNLPLDVGHVLGYFIAHEGHHRGQIVLVARALGLRLPAEVT
                     AGLWQWSQRAAEAGATAQTDA"
     gene            complement(2564..>2988)
                     /locus_tag="VGQ24_14020"
     CDS             complement(2564..>2988)
                     /locus_tag="VGQ24_14020"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEV8456011.1"
                     /translation="AGVFCLGKEGVVVATLEKAWGYQGDNLSLPVRDLETSLPFYERV
                     LGFRVVSRGAAPHRSAVLARDEVQIGLAENGGDPTQDGCAFHVTGLESLFAEFKANGL
                     QKSLSGFDVEQHDGVAWNVFYVVAPDGLCYWFGERHPG"
BASE COUNT          562 a          966 c          936 g          524 t
ORIGIN      
        1 ccgctcctgc ttcggcggca taggcgtcca ggcgaatagc ctccgccggc cactcctgcg
       61 cgaccgcccg ggcatcctcg agggcgagcc gacccaggcc ttgcccttgc tgtgcgaccg
      121 agacggccat gcccgtgaga tagagcggcc gcttcaccgg cgtgaaatag ctcacgtcga
      181 tagcccacgg ctttttggtc gccaatcgca agaccgttac gacccgcttc cggagtattc
      241 caatccgaac tcgtgcgtgg cgttgagcga gggcagcgcc ccgttccgtg acgagggatg
      301 accaatggcc ctcgccgaac cgtgtggtaa gcgcgccagc agctgcgttc tgcagggccg
      361 caatcacgcc cacgtcagca agggtcgcgt cacgaaaccg tagctgcacg tcggccttag
      421 ggcttcggct cgggaaccag cttcggagcc tcctcgacca ggcggtacgg gtgacccgtg
      481 cacgtcacct cggggttcgt gggcgcgaag gttccgaagg gattcgtctt gtagagccac
      541 acgtgaaggt cgtagtgggt tagctccatc gggagcaaag gaggatgtcc catcatcgga
      601 ccatcgaagg cccgacccca gagggtgggg cgtcctttca ccccggtaga cagtgggata
      661 aaccactcgg cggcgaccag gcggagcttg gccccgtcgg gttcgtagat cagcacctgg
      721 ggcttgttag gatcgggaac cgggccgagc aggcttaggt tgagaaaatg gactcccata
      781 ccgccaggca gatagggaac atgcccggcg ggcccagcct gctcaatgac gatgcaaccg
      841 agcgtggaga agtatccatc atggatcgca acgtaggggt cctcgtactt cctgagtgcg
      901 gagcgcacct gggacagatc gggcacctct ggcttggctt gccccagggc aaggggcgcc
      961 gcgacggggg ttacgaggcc caatgtcccg agaatcgcag ccctgagaag gcgctgcctg
     1021 gtgttgcgtc gtctgatctc ctgcatggaa cctccgaggt aagacagtcg agcgtcgttg
     1081 accatatcgt acggccgcta ctcggctagc gtcgcgacca acgtgcacgc ggctgtcccg
     1141 gcgtgcatgc aggtcgtttc cacgatcgtc aggttctcct tatattgccg ccccaccccc
     1201 cgcatgatgc ccttcgccac ggaacaaagt cggcgcggtg acgcgtaggt aatgatcacc
     1261 tcggaagggc tcttccggtc gactcggagt tccggtggtg tcgcgcgcgg atctcgcagg
     1321 cgtaccgccc ggtggatgac cacctcggta ttggccagca gatcgagagc ggtccagcgc
     1381 cgatccacaa accctccata taccttcagg aggtcgggca ctatgaactc gccgaactgt
     1441 tcgaggaggg tcggcgccgg caccccgctg agctcaaccg ccgccgtcac cagggctacg
     1501 agttcctcat cggggtagac ctccgaggcc agattactga ggcgcccgat gcccgcccgt
     1561 tgtccgatct gctcccaaga acctggcggg agggttgcct ggacgaattt tttgaactcc
     1621 gcgaagatga taccgtgcat accaactccg ggctgaggcc ggttagaccg ctccatggaa
     1681 cgtggcccaa gtacctcact cgcgacacgg tgcagcggtc ctagggctgc gctgaacgcg
     1741 gtgcggctgg cgcctgttca tccagcgact ggcgatacct gatacaacct cgcaggaata
     1801 caggccactc cggtaccatc ggcaagggat cctgcttttc gggcaagaaa ccccagaggg
     1861 cggggtgatg ccagcagagc tcatgccccg tgctgtcgcg gtgcgcgcga atcccccggc
     1921 gcagtttccg aatctcttcg atcagcagct cccgggacag gttggtcagg tcctcgtcca
     1981 tcccccacca gccttccggt ttaggcgtca gtttgagcgg tcgcgccagc ttcggccgcc
     2041 cgttgcgacc actgccacag gccagcggta acctccgctg gcagccgaag cccgagggca
     2101 cgggccacca gcacgatctg tccccggtga tgcccttcat gggcgatgaa atagccaagc
     2161 acgtgcccca catctaaggg caggttacgc cacacgtagg ccttggttgg cgggatggtg
     2221 ccaccatgct ggcaaccgag ctcaagcagg cggccgatcc cgctgccgct gcgccgcagc
     2281 gcgggcaaga gttgcctcgc gccgacccga tgccgatcca caaagggtgg gacgggaagc
     2341 ccgtgcggct tgccaagggt cttgatccac ctgcagcggg cgttgtgaat gtggccggcg
     2401 atcatccgga tcgttcgacg gggcgctcca ggtatggtgg ccgaccacag actggaaggt
     2461 agctgttcga acaggaagag cgtgacgcga ttgttggtcc gccaggcggc aaagatcgct
     2521 tcgcggagat ccggtggaga tggcattgct cggtcgatcg cccttagccc gggtggcgct
     2581 caccgaacca gtagcaaagg ccatcgggcg ccacgacgta aaagacgttc cacgcgacgc
     2641 cgtcatgctg ttcgacgtcg aacccggaca gcgacttctg gagaccgttg gccttgaact
     2701 ctgcgaacaa cgattcgagg cccgtgacat ggaaagcaca gccgtcctgc gtaggatctc
     2761 ctccattctc cgcaagccca atctggactt catcgcgggc aagcaccgcg gacctgtgtg
     2821 gcgcagcacc gcgggaaact actctgaacc cgagaaccct ctcgtagaac ggcagggacg
     2881 tctcaagatc ccgtacaggc aggctcaggt tgtcgccctg gtagccccac gctttctcta
     2941 gcgtcgccac caccacaccc tcctttccca agcaaaatac gcccgctg
//
LOCUS       DASYRV010000529         2027 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_740563, whole genome shotgun sequence.
ACCESSION   DASYRV010000529 DASYRV010000000
VERSION     DASYRV010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2027
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_740563"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..539
                     /locus_tag="VGQ24_14025"
     CDS             <1..539
                     /locus_tag="VGQ24_14025"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEV8456012.1"
                     /translation="FAGRGVVYGIVLVGLTIPLQIALIPLFINLRTLGLINTPLALIG
                     PYTAFGLAFGTYIMKGFFQGLPRELEDAARLDGAGEFQIFARVMLPLTRPALATVAIF
                     LFLQNWNEFLFALTFITEGRMRTLPTWIYALLSSEFYGNYPILAASLVLFSVPVLVLY
                     FLFQQQFIEGLTAGAVKQ"
     gene            complement(581..1495)
                     /locus_tag="VGQ24_14030"
     CDS             complement(581..1495)
                     /locus_tag="VGQ24_14030"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8456013.1"
                     /translation="MARVGPLDWTEPREAVPASRRGELWRSLRRGKAAFLGAVILVVM
                     VLSSVFAPVVAPHDPLQAEITKRLRPPAWRDKGTAENLLGSDQLGRDVLSRTIYGSRV
                     SLMVGTIAVLISGILGVVLGMVSAFQGGRLDALIMRIADVQLAFPFILLAIAVVAVVG
                     GGLLNVILILGVTGWVGYARVVRSQVLSIKEKEYVEAARALGSRSLVLIFRQILPNVM
                     TPVIVLATFNVASYMVAEASLTFLGLGVQPSIPSWGIMLADGREYMRAGWWMAVFPGL
                     ALMLTVLSINLVGDWLREYLDPRLRHNE"
     gene            complement(1554..>2027)
                     /locus_tag="VGQ24_14035"
     CDS             complement(1554..>2027)
                     /locus_tag="VGQ24_14035"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8456014.1"
                     /translation="LILVFAVWLGWLPAMGSGTWWHLVMPAITLGSLSLARNTRLVRS
                     GMLDVLNEDYVRTARAKGLTERLVVAKHALKNTAIPLVTLWGLDVGVLFGGAVITESI
                     FAWPGTGRLVIESVTRRDFPVVQAAVFFIAVVFVLVNLVVDLIYGWLDPRVRVGR"
BASE COUNT          362 a          724 c          633 g          308 t
ORIGIN      
        1 gcttcgcggg ccggggcgtc gtgtacggga tcgtgctggt cggcctgacg atcccgctcc
       61 agatcgccct catcccgctc ttcatcaacc tgcgcacgct cgggctcatc aacacgccgc
      121 tcgccctgat cgggccgtac acggcgtttg gcctcgcctt cggcacgtac atcatgaagg
      181 gattcttcca ggggttgccg cgtgagctgg aggacgcggc ccggctcgat ggcgccggcg
      241 agttccagat cttcgcgcgg gtgatgcttc cgctcacccg cccggccctg gccacggtcg
      301 cgatcttcct gttcttgcag aactggaacg agttcctctt cgcgctgacc ttcatcaccg
      361 agggccggat gcggacgctc cccacgtgga tctacgcgct gctctcgagc gagttctacg
      421 gcaactaccc catcctggcg gcgtcgctcg tgctcttctc cgtcccggtc ctcgtgctct
      481 acttcctgtt ccagcagcag ttcatcgagg ggctgacggc cggcgccgtg aagcagtgac
      541 ctggcagtgt tacccgagcc tcggcacggc tccggccctg ctactcgttg tggcgaaggc
      601 gcgggtccag gtactcccgc aaccaatcgc cgaccaggtt gatggacaac acggtgagca
      661 tcagggccag gcccggaaag acggccatcc accatcccgc gcgcatgtac tcgcggccgt
      721 cggcgagcat gatcccccag ctcgggatgg agggctggac gccgaggccg aggaacgtca
      781 ggctcgcttc tgccaccatg tagctggcga cattgaatgt cgcgagcacg atgaccggcg
      841 tcatcacgtt cggcaggatc tgacgaaaga tcaacaccag cgatcggctg cccagggccc
      901 tggcggcctc cacgtactcc ttttccttga tcgacagcac ctggcttcgc accacccggg
      961 cataaccgac ccatccggtc acacccagga tgaggatcac attgaggagt ccaccgccca
     1021 ccaccgccac gacggcaatg gccagcagga tgaagggaaa ggcgagctgc acgtccgcga
     1081 tgcgcatgat gagcgcgtcg agccggccgc cctggaaggc ggagaccatc ccgaggacga
     1141 cccccaggat tccggagatg aggaccgcga tggttccgac catcagcgac acgcgcgagc
     1201 cgtagatcgt ccgggagagc acgtcccgcc ccagctggtc ggagcccagc aggttctcgg
     1261 ccgtaccctt gtccctccac gccggcggtc gcaggcgctt ggtgatctcc gcctggagtg
     1321 ggtcgtgcgg tgcgaccacg ggtgcgaaca ccgaagacag gaccatcacc accaggatca
     1381 ccgcgcccaa gaacgccgcc ttgccacggc ggagcgagcg ccacagctcc ccccttcgcg
     1441 aggccggcac agcctcgcga ggctccgtcc aatccagggg ccccacccgc gccatcccag
     1501 agcctcctag ccgatccggc cagcggccag ttgccgaggt cccgggccga gcttcaacgc
     1561 ccgacccgca cccgagggtc cagccagccg tagatgaggt ctaccacgag gttcacgagc
     1621 acgaagacca ccgcgatgaa gaagaccgcg gcctgcacca ccgggaagtc ccgacgggtg
     1681 accgactcga tcaccaggcg ccccgttccc ggccaggcga agatgctctc ggtgatgacc
     1741 gcaccaccga acagcacccc gacgtcgagg ccccagagag tcacgagcgg gatcgccgtg
     1801 ttcttgaggg catgcttggc gaccaccagt cgttccgtga ggcccttggc ccgcgccgtc
     1861 cggacgtagt cctcgttgag cacgtcgagc atccccgacc ggacgaggcg ggtgttccgg
     1921 gccaacgaga gcgacccgag ggtgatcgcc ggcatgacca gatgccacca ggtcccggaa
     1981 cccatggcgg ggagccagcc gagccagacg gcaaagacca ggatgag
//
LOCUS       DASYRV010000530         9971 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3022882, whole genome shotgun sequence.
ACCESSION   DASYRV010000530 DASYRV010000000
VERSION     DASYRV010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9971)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9971)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9971
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3022882"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..827)
                     /locus_tag="VGQ24_14040"
     CDS             complement(<1..827)
                     /locus_tag="VGQ24_14040"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEV8456015.1"
                     /translation="MPRKCSCKSSRSPLPRRLTIVGSWAALLVAIPASGALAQEPLPQ
                     THTVRKGDTLWDLAQHYLKDPFLWPGIFRQNTDVVEDPHWIYPGEVLRIAPVDNVAAV
                     PTMDTPVPPSTADSTAGSDSTLAAPDSSDALARGPQQPSLAEESDEQLPLFSAQRPRS
                     VAQILKSYTEQPYRPLRRSEFYSSGFLTENQRLPYGRVLGPVTPQQIKAVNTRANALP
                     FTTIAIEAPRGATYEIGDSLLILQIGREIEPYGDVVAPTGLARIIETVDDHYLANIVA
                     "
     gene            complement(1149..1610)
                     /locus_tag="VGQ24_14045"
     CDS             complement(1149..1610)
                     /locus_tag="VGQ24_14045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEV8456016.1"
                     /translation="MNKAILVGNLGADPEVRSTSNGSRVATLSIATSRQWKNQAGEKQ
                     EKTEWHRVVFWNTKFSNLADIAERYCKKGDKVYVEGSIEYRSWQDREGQTRYTTEING
                     RELILLSGKGDGAEAFSAPSKVAAAAAGTKGKEGFEDFPEALDTEDDDLPF"
     gene            complement(1726..2184)
                     /gene="rimI"
                     /locus_tag="VGQ24_14050"
     CDS             complement(1726..2184)
                     /gene="rimI"
                     /locus_tag="VGQ24_14050"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: protein motif:HMM:TIGR01575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HEV8456017.1"
                     /translation="MDAPYRIRSAAPADAAPLVAIERRCFSDPWSESSFREALESPWT
                     FGLVAHNNRGIAGYLIGREVADTGEILNLAVSPDFRRRGVARALLRAGLATFRNRRVE
                     EVYLEVRESNRSAQALYLSSGFRPVGQRAAYYRNPKEDALVLWLALEQPA"
     gene            complement(2144..2860)
                     /gene="tsaB"
                     /locus_tag="VGQ24_14055"
     CDS             complement(2144..2860)
                     /gene="tsaB"
                     /locus_tag="VGQ24_14055"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:TIGR03725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HEV8456018.1"
                     /translation="MWLALDTATDRASVALGVGGAVPMEENIGGARRHAASLLPALQG
                     LLRLAGASLDDLEGIAVSNGPGSFTGLRVGAAMAKALVHSRGVPLWTAPSLMVRAAGV
                     ARGDGLVLSVASALRGEVYAAAYRFFPDRVVTELAPSVRRPAELVGCGLEPALVVGEA
                     PAEILAALESWIGQPVIGPPEGSPRAAQLLDLIGRPGGASLVEDARNWEPVYGRPAEA
                     QARWEMAHGRPLPDSVGSPR"
     gene            complement(2860..3270)
                     /gene="tsaE"
                     /locus_tag="VGQ24_14060"
     CDS             complement(2860..3270)
                     /gene="tsaE"
                     /locus_tag="VGQ24_14060"
                     /inference="COORDINATES: protein motif:HMM:NF014426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEV8456019.1"
                     /translation="MTRSLTQEELEAEGEALGRQLRPGELLTFEGDLGAGKTTFIQAV
                     VRGLGVTSPATSPTYALVHRYQGARGPVFHLDCFRLRSPDEAADLDWEGLVAEGDAIL
                     IEWPERAGGWLPAPSRRFRLSHLSDPARRHLESL"
     gene            complement(3267..5309)
                     /gene="uvrB"
                     /locus_tag="VGQ24_14065"
     CDS             complement(3267..5309)
                     /gene="uvrB"
                     /locus_tag="VGQ24_14065"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HEV8456020.1"
                     /translation="MSSPRFEVVAPFEPAGDQPKAIRELTDGLLRGDKYQTLLGVTGS
                     GKTMTLAHTIANYGKPTLVLSHNKTLAAQLYGELRQFLPRNAVEYFVSYYDYYQPEAY
                     VPATDVYVEKDASINQDLESLRLRSTSSLMEREDVVIVATVSAIYGLGDPAEYRKLMV
                     TVRRGEQRGRDSILSELVRIQYGRNDVSFEQGTFRVRGDSIEVYPAYAEQAIRIELWG
                     DEVERISKIKPLTGETIAQLDQCAIYPAKHFVTQRPTIERAVRAIREELVGRLAELKG
                     AGKLLEAQRLESRTNFDVEMLLEVGTCAGIENYSRHLTGRREGERPACLIDYFPPDFL
                     VVVDESHASLPQIGGMFNGDRARKLTLVEYGFRLPSALDNRPLQFNEFMGLVPQMINL
                     SATPGDLELRLSEGVVVEQIIRPTGLIDPEVDVRPVRGQVDDLLSEIRKREALGERVL
                     VTTLTKRMSEDLTDYLQQAGVRVRYLHSDIDAIERMEILRGLRLGDFDVLVGINLLRE
                     GLDLPEVSLVAILDADQEGFLRSDRSLVQTIGRAARHLNGRAVLYADRITGSMRRALD
                     EMDRRRAIQRAYNETHGITPVSIVKSMEQVRLSTHVADARTERPEPRPALQERVDLHD
                     PAKRAAVIATLERQMREAAANLEFEVAALLRDQLNDLKAAGAPDVRRPTGKIRRRA"
     gene            complement(5396..5806)
                     /locus_tag="VGQ24_14070"
     CDS             complement(5396..5806)
                     /locus_tag="VGQ24_14070"
                     /inference="COORDINATES: protein motif:HMM:NF013995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HEV8456021.1"
                     /translation="MNRWILKTDADVYPFDQLERDRKTVWDGVSNAVALKHIRSMAPG
                     DPVLIYHSGEGKELVGLARISSAPYPDPKRDDPKLVVVDIEVGRRLPKSVSLAAVKAD
                     PFFADLGLVRMSRLSVIPVPEHQWNKLLGMGGLR"
     gene            complement(5803..7920)
                     /locus_tag="VGQ24_14075"
     CDS             complement(5803..7920)
                     /locus_tag="VGQ24_14075"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEV8456022.1"
                     /translation="MLERHADRLDLELVDRALRFSASAHRGQKRMSGEDFVSHTIAVA
                     LILAEQLLDSTTIVAALLHDVVEDSDVRTEDIAREFGPEVAGIVEGLTKISSLTFHSS
                     AEEQVENYRKLLLSIAKDARVIIIKLGDRLHNMRTLEHLPPERRARIALETREIYAPL
                     AHRFGMAGIKAELEDLAFKFLEPEEYKDLATQVAAKRAAREQTILKLKIPLDYELKEE
                     GIDWFEVTGRPKHLWSIYQKMKKRGKAFDEIYDLMAVRVIVRSVPDCYHVLGIIHHNW
                     TPIQERIKDYIASPKSNAYQSLHTTIFGPGGQLFEVQIRTLDMHRTAEYGIAAHWLYK
                     RDGSPDELDQHLGWFRQLLELQQDTHSPEEFLEFLKIDLYQDEIFIFTPQGDVKRLPK
                     GSTAIDFAFHVHTEVGLKCQGAKVNGRIAPLHRELKSGDTVEILTSSTAKPSRDWLSH
                     VRTARARHKIKQWVNHEEETVSRSLGKDILAREVRRRRLEAPDDNRLAKAADTLSLAD
                     GKGLEIAIGRGDVPIGQVMRALYPDLPTDELQEPKPTVFGRVIDRIRLGRGIKIQGVD
                     GLMVRYAQCCQPVPGDSVVGYVTQGRGISIHRSDCPNLLTLSAEERRVDIDWQETQGE
                     AFAVRLAVSGEDRRGLYADIMEAISQTGTNIRGADLHTKDGTVFGTIFVEVDNLPHLG
                     KVMKAVRKVKGVTAIERREAPPG"
     gene            complement(7980..8663)
                     /gene="radC"
                     /locus_tag="VGQ24_14080"
     CDS             complement(7980..8663)
                     /gene="radC"
                     /locus_tag="VGQ24_14080"
                     /inference="COORDINATES: protein motif:HMM:TIGR00608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEV8456023.1"
                     /translation="MAVPVSTLANADRPRERLWSLGPAALTTAELLAIVLGTGGGGQD
                     VLELAAGLLEVTEGSLRRLAQRPGAELLRSPGIGPTKAGRLIAAFELGARTAREERPT
                     VQRIREPEDVIRLFGTRLRDLQVEEFHLLALDSQSQVLREVLITRGLLNSSLVHPREV
                     FRAAIAEAAAGIIVVHNHPSGDPTPSAEDRAATRQLASAGQLLDVPLYDHVIIAGDRF
                     VSFATAGLL"
     gene            complement(8736..>9971)
                     /locus_tag="VGQ24_14085"
     CDS             complement(8736..>9971)
                     /locus_tag="VGQ24_14085"
                     /inference="COORDINATES: protein motif:HMM:NF019155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SEC-C metal-binding domain-containing protein"
                     /protein_id="HEV8456024.1"
                     /translation="EAEIVAGAGQKGAVTIATNMAGRGTDIKLGKDLDLTTEEAGLQI
                     LGTERHESRRIDRQLRGRSGRQGDPGQSIFFLSLEDDLMRLFGSDRIARWMDKSGAEA
                     GEVITGGLVTRAIEQAQKRVELQNFQQRKRLLEYDDVMNQQREVIYSLRLFALERGEE
                     LKAEARRMIEVALERAVITFLVGADRPEEYDRGGLREALTLQYLVTADALVDADATPT
                     IERMVEVVKAEGEESFRRKTQYLADFGKTIGMPEVDTEVLSHVMLSVLDERWKDHLYD
                     LDQLRNAIQYRAWGQKDPLVEYKREAFEMFEDLMHDIQSTFTERFFKTQVSAEPPRVE
                     PQARRVAAPPVAEPVGADDLFTAPPRRVVAPPPISAGLSTSNGPIGRATAAVPEVGRN
                     DPCPCGSGKKYKKCHGAGR"
BASE COUNT         1678 a         3262 c         3214 g         1817 t
ORIGIN      
        1 gcgacgatgt tggcgagata gtgatcgtcc accgtctcga tgatccgcgc cagcccagtt
       61 ggggcgacta catccccata gggctcgatc tcgcggccga tctggaggat gagcaggctg
      121 tcgccgatct cgtaggtggc acccctcgga gcttcgatgg ctatggtggt aaacggaagc
      181 gcgttggccc gggtgtttac cgccttgatc tgttgcggtg tgaccggccc gagcacacgt
      241 ccgtacggta ggcgctgatt ctcggtgagg aagcccgacg agtagaactc actgcgccgg
      301 agcgggcgat agggctgctc ggtgtagctc ttgaggatct gggcgacgct acgcgggcgc
      361 tgggcgctga agagcggcag ctgctcgtcc gattcctcgg ccagggacgg ctgctgaggc
      421 cctcgggcca aagcgtcact ggaatccggg gcggcgaggg tggaatcgct accggcggtg
      481 ctatcggcgg ttgacggagg gaccggcgtg tccatagtgg ggaccgcagc cacgttgtcg
      541 accggagcaa tgcgaagcac ctcgcccgga taaatccagt gcggatcttc cacgacatcg
      601 gtgttttgac ggaagatacc gggccagagg aatgggtcct tgagatagtg ctgtgcgaga
      661 tcccagagcg tgtcgccttt gcgcacggtg tgggtctggg gcaggggctc ctgcgccaac
      721 gcaccggacg cggggattgc cacgagcagt gcggcccacg accccacgat ggtcagccgg
      781 cggggcaacg gcgaccggct cgatttgcag gaacacttac gcggcatcgg gatctcccag
      841 cggcgtcgct gtgtgatatc gggacacggt cgaacgtgag gtatcgccgg gggagttgca
      901 aaatcaacgc caccttcaac gcacttgaat cgagggacgt aacacgtgtg tactgagcgg
      961 gttgcgcccc tttaaagaga gccaatccca ccccctggag gtctggcgat cggcgggagg
     1021 actggcggga agcggggcgg cgggccagcg gggcggcggg gccgggcttg agtgatattt
     1081 tgccctgctg gcactcccca atttcctgcg tttactgtcc cactgccctg ctgccctgct
     1141 gccccgcttc aaaacggcag gtcgtcgtcc tcggtgtcga gtgcctcggg gaagtcttcg
     1201 aagccttcct tgcccttggt cccggccgcc gccgccgcga ccttgctggg agccgagaag
     1261 gcttcggccc catctccctt gcccgaaagg aggatgagct ctcggccgtt gatctcggtg
     1321 gtgtagcggg tctggccctc gcgatcctgc cacgagcgat attcgatgct gccctcgacg
     1381 tacaccttgt ctcccttctt gcagtagcgc tcggcgatgt cggcaagatt ggagaatttg
     1441 gtgttccaga ataccacccg atgccactcg gtcttttcct gtttctcccc ggcctggttc
     1501 ttccactggc ggctggtggc gatcgagagc gttgcgaccc gggatccgtt cgacgtgcta
     1561 cgcacttccg gatcggcccc gagattcccg accaggatgg ccttgttcat actccgactc
     1621 acatgcacct ccagggttca acgtgcgtcc cacacaagtg actggcggtt aatataggcg
     1681 gcggaccacc ggcttcaacc aaattttccg tcgaggggtc caatttcacg caggctgctc
     1741 gagcgcgagc cagagcacca gggcgtcctc cttgggattt cgataatacg ccgctcgctg
     1801 gcccaccgga cgaaaccccg agctcaggta gagcgcttgc gccgagcggt tcgattcgcg
     1861 gacctcgagg tacacttctt cgacccgccg gttccggaac gtggcgagcc cggcacgaag
     1921 gagcgcccgc gccacaccac gtcggcgaaa atcaggtgag accgcaaggt tcaagatctc
     1981 gcccgtgtcg gcgacttcac gcccgatgag gtagccggca atgccccggt tgttgtgggc
     2041 gaccagcccg aacgtccagg gcgattccag cgcttcccga aagctgctct cgctccacgg
     2101 atcgctgaag cagcggcgct cgattgccac gagcggcgcc gcatcagcgg gggctgccga
     2161 ccgaatccgg tagggggcgt ccatgggcca tctcccaacg cgcctgtgct tctgccgggc
     2221 ggccatatac cggctcccag ttgcgagcgt cttcgaccag gctcgcaccg ccgggacgcc
     2281 caatcaggtc caggagctgt gcggctcggg gggagccctc gggtggtccg atgacaggct
     2341 ggccaatcca gctctcgagt gctgccagaa tctcggcggg cgcctcgccc acgaccaggg
     2401 ccggctcgag gccgcagccg acgagctcgg ccggccggcg cacggacggc gccagctcag
     2461 tcacgacccg gtcagggaaa aaccgatacg ccgcggcata cacctctccg cggagtgcgc
     2521 tggccaccga gagcaccagt ccgtcgcccc gcgccacgcc ggccgctcgc accatgaggg
     2581 acggtgcggt ccatagcggg accccacggc tatgcaccag cgccttcgcc atcgccgccc
     2641 cgacccgcag accggtaaag cttccgggac cattgctcac cgcaatgccc tcgaggtcgt
     2701 cgagcgacgc acccgccagc cgaagcaggc cctgcagcgc gggcagcagt gaggctgcgt
     2761 ggcgccgagc gccgccgatg ttctcttcca tcggcaccgc accgccaacg ccgagcgcca
     2821 ccgaggcgcg gtccgtggcc gtatccagcg ccagccacat cagagcgact ccaggtggcg
     2881 gcgcgccggg tccgacaggt gcgagagtcg aaagcgccgg ctgggcgcgg ggagccagcc
     2941 cccggcccgc tctggccact cgatcagaat tgcgtcgccc tccgccacca gtccttccca
     3001 atcgagatcc gcagcctcgt ctggagaacg cagtcggaaa cagtcaaggt gaaagactgg
     3061 gccccgggcg ccctgatagc ggtgaaccag ggcataggta ggacttgtgg cagggctggt
     3121 gacgcccagc ccacgcacca ccgcctggat gaacgtcgtc tttcccgctc cgagatcgcc
     3181 ctcgaaggtg agcagctctc ccggccggag ctgccggccg agagcctcac cttcggcctc
     3241 gagctcttcc tgcgtgagcg agcgagtcac gcgcgtcggc ggatcttgcc cgtgggacgc
     3301 cgcacgtcgg gggcgccggc ggccttgagg tcgttcagct ggtcccgaag cagggcggcg
     3361 acctcgaact cgagattggc ggcggcttct cgcatttgcc gttcgagcgt agcaatcacc
     3421 gcggcacgct tggctggatc atgcagatca acgcgctcct gcagggcggg acgtggctcg
     3481 ggccgctcgg ttctcgcgtc ggctacgtgg gtggaaagcc ggacctgctc catggacttc
     3541 acaatcgaga ccggggtgat gccatgggtc tcgttatagg cccgctgaat ggctcggcgc
     3601 cggtccatct catccagcgc ccgccgcatc gagccggtga tccggtcggc atagagaact
     3661 gcccggccat tgaggtgccg ggcggcccgg ccgatggtct gcaccagcga ccgatcggag
     3721 cggaggaacc cctcctggtc agcatcgaga atggcaacca gcgagacctc cggcaggtcc
     3781 agtccttccc gcaacagatt gatgccgacc agcacatcga agtcgcccaa acgaagtcca
     3841 cggagaatct ccatccgctc gatcgcgtcg atgtccgagt gcaggtaccg gacccggacc
     3901 cccgcctgct ggaggtagtc ggtgagatcc tccgacatcc gcttggtcaa cgtggtcacc
     3961 agcacgcgct cgcccagcgc ctcgcgcttc cggatctcgg agagcagatc gtccacttgc
     4021 ccccggaccg gacgaacatc cacctcggga tcgatcagcc ccgtgggccg gatgatctgc
     4081 tccaccacca cgccctcaga gaggcgcagc tcgagatcgc ccggcgtggc cgagaggttg
     4141 atcatctggg gcaccagtcc catgaattcg ttgaactgga ggggccgatt gtccagcgcc
     4201 gacggcaggc ggaagccgta ttccaccagc gtgagcttcc gggctcgatc gccgttgaac
     4261 atgccgccga tctgtggcag gctcgcgtgc gactcgtcca ccacgacaag gaagtcgggc
     4321 gggaagtagt cgatcagaca ggccggccgc tctccctccc gccggccggt caagtgccgt
     4381 gagtagttct cgatcccggc gcaggtgccc acttccagca gcatctcgac atcgaagttg
     4441 gtgcgcgact ccagccgctg ggcttccaac agcttgccgg ctcccttcag ctctgcgagg
     4501 cgcccaacga gctcctcccg gatggccctc accgcgcgtt cgatggtggg gcgctgggtg
     4561 acgaagtgtt tggcggggta gatggcgcac tggtcgagct gggcgatggt ctcgcccgtt
     4621 agcggcttga tcttgctgat ccgttcgacc tcgtcgcccc agagctcgat ccggatggcc
     4681 tgctcagcat atgcggggta gacctcgatc gagtcccccc ggacacgaaa ggtgccctgc
     4741 tcgaaggaga catcgttccg gccgtactgg atgcgcacca gctccgagag aatcgagtcc
     4801 cttcctcgct gttccccccg ccggacagtc accatgagct tccggtactc agccggatcg
     4861 ccgaggccgt agatggcgct cacggtggcc acgatgacca cgtcttcccg ctccatgagg
     4921 ctggacgtgg accgaagtcg caggctctcg aggtcctgat tgatcgacgc gtccttttcg
     4981 acgtacacgt cggtagcggg gacgtacgcc tcgggctggt agtagtcgta ataggacacg
     5041 aagtactcaa cagcattgcg aggcaggaac tggcggagct cgccatacag ttgcgccgcc
     5101 agcgtcttgt tgtgcgacag gacgagggtg ggcttgccgt aattggcgat ggtatgagcc
     5161 agcgtcatcg ttttgccgga accggtgacc cccaggagag tctggtactt gtcaccccgg
     5221 aggagtccat cggtcagctc gcgaattgcc ttgggctggt cgccggcggg ctcgaacggg
     5281 gcgacgacct cgaagcgggg gctgctcatc ggggaaatat atactgccgg ggtttcttcg
     5341 ggagtgccta cttcaggctt tcgtgctttc gcgtttgctg ttgcgcggga ggccgttacc
     5401 gcaatccacc catcccgagc agcttgttcc actggtgctc cggcaccgga atcaccgaga
     5461 gacgtgacat ccgcactagc cccagatcgg cgaagaatgg gtcggctttg accgctgcca
     5521 gggagacgct cttcggcaag cggcgaccta cctcgatgtc aacgacgacg agcttgggat
     5581 catcccgttt gggatcagga tatggagcgc tactgatgcg ggcgaggccg acgagttctt
     5641 tgccctcgcc ggagtgatag atgagtaccg ggtcgccggg ggccatgctg cggatgtgct
     5701 tcagggcaac cgcattgctc accccgtccc agacggtctt ccggtcccgc tcgagttgat
     5761 cgaagggata gacgtccgca tcggtcttga gaatccaacg gttcaaccgg ggggtgcctc
     5821 gcggcgctcg atggcggtga cgcctttcac cttccggacg gccttcatga ccttgcccag
     5881 gtggggcaga ttgtccacct cgacgaaaat ggtgccgaag acggtgccat ccttggtgtg
     5941 cagatcggca cctcggatat tggtaccggt ctggctgatg gcttccatga tatcggcgta
     6001 gagcccgcgc cgatcctcgc cggagacggc gagacgcacc gcgaaggcct cgccctgggt
     6061 ctcctgccaa tcgatgtcca cccggcgctc ttctgccgag agcgtgagga gattgggaca
     6121 gtcggagcga tggatcgaga tgccgcgccc ctgggtgaca tagcccacca ccgagtcgcc
     6181 ggggaccggc tggcagcact gggcataccg gaccatcaaa ccatccactc cctgtatctt
     6241 gatgccgcgg ccgagacgga tccggtcgat gacccggccg aagacggtag gcttgggctc
     6301 ctggagctca tccgtgggga gatccggata gagcgctcgc atgacctggc cgatggggac
     6361 gtcacctctg ccgattgcga tctccaagcc tttgccatca gccaacgaga gagtatcagc
     6421 cgccttggcg agccgattgt cgtcgggcgc ctccaacctg cggcggcgca cctcgcgggc
     6481 gaggatgtcc ttacccaggc tccggctgac cgtctcttcc tcgtgattca cccactgctt
     6541 gatcttgtgc cgcgctcgtg cggtgcggac gtggctgagc cagtcgcggc tcggcttggc
     6601 ggtcgagctg gtgaggatct cgaccgtatc gccactcttg agctcgcggt ggagcggcgc
     6661 gatccttccg ttcaccttgg cgccctggca cttcaggccg acttcggtgt gtacgtggaa
     6721 ggcgaagtcg atggcggttg accccttcgg cagccgtttc acgtctccct gaggggtgaa
     6781 gatgaagatt tcgtcctggt agagatcgat cttcaggaac tcgaggaact cttccggact
     6841 gtgggtgtcc tgctgcagtt ctaggagctg gcggaaccag ccgaggtgct ggtccagctc
     6901 gtccggacta ccatcccgct tatacagcca gtgcgcggcg atgccgtact cggccgtccg
     6961 gtgcatatcc agtgtgcgga tctgcacctc gaacagctgt ccgccgggac cgaatatcgt
     7021 ggtatggagc gactgatacg cgttggattt cgggcttgcg atgtaatcct tgatccgctc
     7081 ctggatgggc gtccagttgt ggtgaataat gccgagcaca tggtagcagt ccggcaccga
     7141 gcggacgatc actcgcacgg ccatgagatc gtagatctcg tcgaacgcct taccccgctt
     7201 cttcatcttc tggtagatgg accagagatg cttgggccga ccggtgacct cgaaccagtc
     7261 gatcccctct tccttcagct cgtagtcgag cgggatcttg agcttgagga tggtctgctc
     7321 ccgggcggcg cgcttggccg ccacctgggt ggccagatcc ttgtattcct cgggctccag
     7381 gaacttgaag gccaagtctt ccagctcggc cttgatgccg gccataccga agcggtgggc
     7441 cagaggcgcg tagatctctc gggtttccag tgcgatccgg gcgcgccgct cgggcgggag
     7501 atgctcgagc gtccgcatgt tgtgcaaccg gtcgcccagt ttgatgatga tgacccgcgc
     7561 gtccttggcg atcgacagca gcagcttccg gtagttctcg acctgttcct cggccgagga
     7621 gtggaaggtc aggctggaga ttttggtgag accttcgacg atcccggcca cctcgggacc
     7681 gaactcccgg gcgatgtctt ccgtccgcac gtcggagtct tccacgacat cgtgcagcag
     7741 cgcagccaca atggtcgtgc tgtccaggag ctgctcggcc aggatgagcg cgacggcgat
     7801 ggtgtgggag acgaagtcct cgcccgacat ccgcttttga ccgcggtggg cggacgcgct
     7861 gaagcggagc gcccgatcca ccagctcgag gtcgagccgg tcggcgtgtc gctcgagcac
     7921 cgctctcaga tcaggagcga gctcgggtag gctcccggtt acgggagtct tggttccagt
     7981 cacaataggc ctgccgtcgc gaagctcacg aagcgatccc cggcaatgat tacgtgatcg
     8041 tacaagggta cgtcgagcag ctgacccgcc gacgccagct gcctggtggc cgcccggtct
     8101 tccgccgatg gcgttggatc gccgctcggg tggttgtgca ccacaataat tccagccgcg
     8161 gcctccgcga tcgcggctcg aaacacttca cggggatgaa ccagggagct gttcagcaac
     8221 ccgcgggtta tcagcacctc gcgaaggacc tgactctgac tgtccaacgc gagcaagtga
     8281 aactcctcga cctgaagatc acgcagccgg gtaccaaaca gacgaatgac gtcttcgggt
     8341 tcccggatcc gctgcaccgt cgggcgctct tcccgtgcgg tgcgggcgcc caactcaaag
     8401 gcagcgatga gacggccggc cttggtgggg ccgattccgg gagaccgcag gagctccgcc
     8461 ccgggacgtt gtgccagccg gcgaagcgac ccctcggtaa cctccaaaag cccggcggcc
     8521 agctcgagca cgtcctggcc gcctccccct gtacctaaca cgatggcaag aagttcggcg
     8581 gtcgtcaacg cggcaggccc cagcgaccag aggcgctcgc gggggcggtc ggcgttggca
     8641 agggtggaga caggaacggc cacaccggat gatagcgggc cggaaggact acctgcgttc
     8701 cattatcatg cagggacgac ggaagttacg ccgctctaac gtcccgcccc atgacacttc
     8761 ttgtacttct tccccgagcc gcagggacag ggatcgttcc gcccgacctc gggcacggca
     8821 gccgtcgccc ggccgatcgg tccattcgag gtgctgaggc cggctgaaat cggaggtggc
     8881 gccacaaccc ggcgcggagg cgcggtgaac aggtcgtccg cccccaccgg ctcggccacc
     8941 ggaggagctg ccacccgccg ggcctggggc tccacccgcg gcggctccgc gctcacctgg
     9001 gtcttgaaga agcgctcggt gaatgtggac tggatgtcgt gcatcaagtc ctcgaacatc
     9061 tcgaacgcct cacgcttgta ctcgaccagg gggtccttct ggccccaggc gcgatactgg
     9121 atggcattcc tcagctggtc caggtcgtac aggtggtcct tccaccgctc gtccagcacc
     9181 gagagcatga catgcgagag gacctcggtg tccacctcgg gcatgccgat cgtcttcccg
     9241 aaatcggcca ggtactgggt cttccggcgg aagctctcct ccccctccgc cttgaccacc
     9301 tccaccatcc gctcgatggt gggagtagca tcggcatcga ccagggcatc cgcggtcacg
     9361 aggtactgca gcgtgagtgc ctcacgcagg ccgccgcggt cgtactcctc cggccgatcg
     9421 gccccaacca ggaacgtgat aaccgcccgc tccagcgcga cctcgatcat tcgccgagcc
     9481 tcggccttga gctcctcacc gcgctccagc gcgaacagcc ggagcgagta gatcacttcg
     9541 cgctgctgat tcatgacgtc gtcgtattcc agcagccgct ttcgttgctg aaaattctgg
     9601 agctcgaccc gcttctgcgc ctgctcgatg gcccgcgtga ccagtccgcc ggttatgact
     9661 tcgcccgctt ccgccccgct cttgtccatc cagcgggcaa tccggtcgga gccgaagagc
     9721 cgcattagat cgtcttccag cgacaggaag aagatcgact gtcccgggtc gccctggcgg
     9781 ccggagcgtc cccgcaactg ccggtcgatc cggcgcgact cgtgccgctc ggtgcccagg
     9841 atctgcaaac cggcttcctc ggtggtcagg tcgagatcct tgcccagttt gatgtcggtg
     9901 ccgcgcccgg ccatgttcgt cgcgatcgtc accgcgcctt tctgccccgc cccggccacg
     9961 atctccgcct c
//
LOCUS       DASYRV010000531         4791 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2818465, whole genome shotgun sequence.
ACCESSION   DASYRV010000531 DASYRV010000000
VERSION     DASYRV010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4791
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2818465"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            128..1486
                     /gene="selA"
                     /locus_tag="VGQ24_14090"
     CDS             128..1486
                     /gene="selA"
                     /locus_tag="VGQ24_14090"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004125 - L-seryl-tRNA(Sec) selenium
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016260 - selenocysteine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HEV8456025.1"
                     /translation="MTDRRRQLPSVDRLLHQPAIQELLGIAPRGAVVAAVRESIEAAR
                     TRRAGPPERWEEDVRERLARRAGSSLLPVLNATGVVLHTNLGRAPLAVPAIQAMTAVA
                     GGYSNLELDLPSGTRGSRNDHCRDLLRTSTGADDGLAVNNAAGALVLALNALVEGRDV
                     AISRGELIEIGGSFRIPDIMTKSGARLHEVGTTNRTHLDDYRRAVDRGVAAILTVHRS
                     NFEQRGFVASPAPAALAAIADEAGIPYLYDVGSGLLADLAPWGLTGEPRVSEALAAGA
                     GLVLFSGDKLLGGPQAGCLVGRTDLVARCRTNPLARALRADKLTLAALAATLALYQDP
                     EIAIRTIPVLTMLTLDQGELSRRASRLAALCPEAVRAQTLQGESAVGGGSFPGAVLPT
                     TLVALEAGSLGPDGLALRLRLGEPPLVVRVAADRVLLDPRTLPEDAFPTVARAIEQAL
                     TS"
     gene            1483..2025
                     /locus_tag="VGQ24_14095"
     CDS             1483..2025
                     /locus_tag="VGQ24_14095"
                     /inference="COORDINATES: protein motif:HMM:TIGR01662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEV8456026.1"
                     /translation="MSGRRAVFLDRDGTIIEDAGYLRDPAGVRLLPGAAHAIRHLNEH
                     GLIAVVATNQSGIARGLLTLDEYNATERRVDELLTLEGARLDAHYFCPHLPELNGPCD
                     CRKPGSLLYRQAAERFGIDLSRSWWVGDRLRDVLPAEGFGGRGILVGTTEPEGAESNR
                     FLRARDLMDAVELIDPSHAS"
     gene            2088..2675
                     /gene="purN"
                     /locus_tag="VGQ24_14100"
     CDS             2088..2675
                     /gene="purN"
                     /locus_tag="VGQ24_14100"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEV8456027.1"
                     /translation="MAISGRGSNLEALLDALGPGARAQVALVLSDRAEAAGLDRARDR
                     GIPAETLSHPADGDEWLRLLWRFRIDLVVLAGYVKLVPAPVIAAYRGRIINIHPALLP
                     AFGGKGMYGRRVHQAVLDSGARESGATVHLVDEVYDRGAVLAQVRVPVLPGDTADTLA
                     ERVLAVEHRLLPAAVLAAAKAGRPVPLPDVVESPS"
     gene            2686..4215
                     /gene="purH"
                     /locus_tag="VGQ24_14105"
     CDS             2686..4215
                     /gene="purH"
                     /locus_tag="VGQ24_14105"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEV8456028.1"
                     /translation="MSRALISVSDKRGVVAFARGLVELGWEIISTGGTAAALKAAQVP
                     VTLVEQVTGFPELLDGRVKTLHPAVHAALLARRSLPEHTTALKQHGIVPIDLVAVNLY
                     PFQLTVSRQGASFDDAVENIDVGGPSMLRSAAKNHESVLPVVDPTDYPLVLDLLRRGE
                     VTPDIRRDFAAKVFAHTSDYDAAIAAYLTPKGDELPVRMSVAMERMQALRYGENPDQR
                     AALYETEEPRGIRDLTQRQGKELSFNNLLDVDAAMWAVACWAHRPACAVIKHTTPCGI
                     AVAASAVEAFSKARSTDPLSAFGSVVAFNTVVDQTTAKAMSDLFVEVVVAPSFHAEAL
                     EVFAAKKQLRVVELPVSDGARALDFKRVRGGFLVQDQFQFDASERGWKVVTKRQPTDT
                     EWNDLRFAWAAVASIKSNAILLARNEMAIGIGAGQMSRVDSAFVAVHKAQQQGHETSG
                     SVLASDGFFPFPDGVEQAAAAGVNAIIQPGGSLRDSEIIEAAERHGMAMVITGKRQFR
                     H"
     gene            4232..>4791
                     /locus_tag="VGQ24_14110"
     CDS             4232..>4791
                     /locus_tag="VGQ24_14110"
                     /inference="COORDINATES: protein motif:HMM:NF022481.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2723 domain-containing protein"
                     /protein_id="HEV8456029.1"
                     /translation="MSGERVLNSLASERPPYVWALVTTLVVFAIYLATLAPSTAFWDT
                     SEYIAAAKVLGIPHPPGNPLFVILAHTFGLLPLAAAYAVRINLFAAATSAAAAGLWFL
                     VAERWLRTIVPHRWARYGAAFGGVLVGATSWTVWNQSTVNEKVYTLSLLSIALVMWLV
                     VRWGDDEPGTHRDRWLVLIAYVLALTS"
BASE COUNT          723 a         1634 c         1628 g          806 t
ORIGIN      
        1 gtgacgccgt cggcgtcgtg gctgttcccg agaagaagcc cgcgccgtca ccgagcgaca
       61 gcctgcgcgg acccgggcgc cgcgactcgg ccgcgccaaa gccaccccag cgcaagcctt
      121 cgccaagatg accgatcgca ggagacaact tccctcggtg gaccggctcc tccaccaacc
      181 cgccatccag gagctcctcg ggatcgcgcc gcgcggcgcg gttgtcgcgg cggtgcgcga
      241 gtccatcgag gcggcgcgca cccgacgggc agggccgcca gagcgctggg aagaggacgt
      301 gcgcgagcgg ttggcccgcc gggccggctc gagcctgctg ccggtgctca atgcaacggg
      361 tgtcgtgctg cacaccaacc tgggccgcgc gcccctcgcg gttccggcga ttcaggcgat
      421 gacggcggtg gccggcggct acagcaacct cgagctcgac cttccatccg gcacccgcgg
      481 aagccggaac gaccattgcc gcgacctgct ccgcacgagc accggcgcgg acgacggact
      541 cgccgtcaac aacgccgccg gcgcactggt gctcgcgctg aatgcgctgg ttgagggtcg
      601 cgatgtcgcc atctcccggg gcgagctgat cgagatcggc ggatcgttcc gcatccccga
      661 catcatgacc aagagcggcg cccggttgca cgaagtcggc accaccaatc gcacccacct
      721 ggacgactat cgccgcgccg tcgatcgcgg ggtcgctgcg atcctgaccg tacaccggtc
      781 caatttcgag cagcgcggtt tcgtggcgtc gccggcaccg gcagcgctcg cggccatcgc
      841 cgacgaggcg ggcattcctt atctgtacga cgtgggcagc gggctgctgg cggacctcgc
      901 gccgtggggt ctcaccggcg agccccgggt gtccgaggcg ctcgccgcag gagcggggct
      961 cgtcctcttc agtggggaca agctgctcgg cgggccgcag gcagggtgcc tggtgggccg
     1021 aacggatctt gttgcccgct gccgcaccaa tccgcttgcg cgcgcgctgc gagccgacaa
     1081 gctcacgctg gcggcactgg ctgctaccct ggcactgtac caggacccgg agatcgccat
     1141 ccgaacgatt cccgtgctca ccatgctcac cctggaccag ggcgagctga gccgccgagc
     1201 ctcccggctg gccgcgttgt gtccggaggc ggttcgggcg cagacactgc agggagagtc
     1261 cgccgttggg ggcggctcgt tcccgggtgc cgtgttgccg acgaccctgg tcgcgctcga
     1321 agccggatcg ctggggcccg acgggctcgc gctccggctc aggctgggcg agcctcccct
     1381 cgtggttcga gtggcagccg accgcgttct gctcgatcct cgtaccctgc cggaagacgc
     1441 ctttcctacg gtggcccgcg cgatcgagca ggcgctcacg tcgtgagcgg ccgtcgcgcc
     1501 gtctttctcg accgggatgg tacgatcatc gaagacgcag gctacctgcg tgacccggcc
     1561 ggggtccgtc tccttcccgg tgcggcccac gccatcaggc atctcaacga gcacggcttg
     1621 atcgcggtgg tcgcgaccaa tcagtccggc atagcccgtg gtctgctcac gctcgacgag
     1681 tacaacgcca cggagcggcg ggtggacgag ctcctgactc tcgagggcgc gcgcctcgac
     1741 gcccactact tctgcccgca cttgcctgag ttgaacgggc cttgcgactg ccgcaagccg
     1801 gggtcgctgc tctaccggca agcggcggag cggttcggca tcgatctgtc ccgaagctgg
     1861 tgggtcgggg atcgattgcg cgatgtgttg ccggcggaag gcttcggcgg acgtgggatt
     1921 ctcgtcggaa cgacggaacc cgagggcgcc gagagtaacc ggttcctacg cgcccgagac
     1981 ctgatggatg ctgtcgaact gattgaccct tctcacgcct cctagcttct agctcccagc
     2041 tcccagctcc ccccattacc ttccccgcca tgaagatgcg gatagccgtg gctatctccg
     2101 gccgcggcag caacctggag gcgctgctcg acgccttggg accgggtgcg cgcgcacagg
     2161 tcgcactggt actgagcgat cgcgcggagg ccgccgggct ggaccgtgcc cgggatcggg
     2221 gaatccctgc cgaaacgctc tcccaccccg ccgacggcga cgagtggctc aggctgctgt
     2281 ggcgattccg gatcgatctc gtcgtgctgg cgggctatgt gaagctggtc cccgccccag
     2341 tgattgcggc ataccggggc cgtatcatca acatccaccc tgctctcctg cccgcgttcg
     2401 gcggcaaggg aatgtacgga cgccgggtgc accaggcagt cctggacagc ggcgcccgcg
     2461 aatccggagc caccgttcat ctggtggacg aggtgtacga tcggggggcc gtgctggccc
     2521 aggtccgggt ccctgtcctg ccgggcgata ccgcggatac tctggccgag cgggtcctgg
     2581 cggtcgagca tcgtctgctg ccggcggcgg tccttgctgc agcgaaggca ggccgcccgg
     2641 tgccgctgcc cgatgtggta gagtctcctt cgtgagtcga tcgtcgtgtc tcgcgcatta
     2701 atctccgtca gcgacaagcg tggcgtggtc gcctttgccc gcggcctggt ggagctgggc
     2761 tgggagatca tctccaccgg tggaaccgcc gcggccctca aagccgccca ggtgcccgtc
     2821 accctggtgg agcaggtcac cgggttcccc gagctgcttg acggccgggt caagaccctg
     2881 catccagcgg tgcacgcggc gttgctcgcc cggcgaagcc tgcctgagca cacgacggct
     2941 ctgaagcagc atgggatcgt tccgatcgac ctggtggcag tgaatctgta tccgttccag
     3001 cttacggtct cgcgccaggg cgcctcgttc gacgacgcgg tcgagaatat cgacgtcggc
     3061 ggaccctcta tgctccgctc cgccgccaag aaccacgagt ccgtcctccc ggtggtggat
     3121 cccaccgatt accccttggt tctcgatctg ctgcgccggg gagaggtcac cccggacatt
     3181 cgccgggact tcgcggccaa ggtcttcgcc cacacctccg attacgatgc cgcgatcgcg
     3241 gcatacctca cgcccaaggg ggacgagctg ccggtcagga tgagcgtagc aatggagcgc
     3301 atgcaggcgc tccgctacgg cgagaacccg gaccagcggg ccgcgctcta cgagaccgag
     3361 gaacctcgcg ggatccggga tctcacccag cgacagggga aggagctctc gttcaacaac
     3421 ctgctcgatg tcgatgccgc catgtgggcg gtggcatgct gggcccaccg gccggcctgc
     3481 gccgtcatca agcacacgac gccctgcggc atcgccgtgg cagcctcggc ggtggaggcc
     3541 ttcagcaagg cgcgctcgac cgatccctta tcggcctttg gctcggtggt cgcattcaat
     3601 acggtggtgg accagacgac ggccaaggcg atgagcgatc tattcgtcga ggtcgtggtg
     3661 gcaccctcat tccatgccga ggcgctcgag gtgttcgccg cgaagaaaca gctccgggtg
     3721 gtcgagctgc cggtgagtga cggcgcccgg gcactcgact tcaagcgggt gcgaggcggg
     3781 ttcctggtcc aggaccagtt ccagttcgac gcctcggagc ggggctggaa ggtagtaacg
     3841 aagcggcaac ccacggacac cgagtggaac gatctccggt ttgcctgggc cgcggtcgcc
     3901 agcatcaagt ccaatgccat cctcctcgcc cggaacgaga tggcgatcgg catcggcgct
     3961 ggtcagatga gccgggtgga cagcgccttc gtggcggtgc acaaagcgca gcagcaaggc
     4021 catgaaacat cgggcagcgt cctggcgtcc gacggtttct tcccgtttcc cgacggtgtg
     4081 gagcaggcgg cagcagcggg ggtgaacgcg atcatccagc cgggtgggtc gctgcgcgat
     4141 tccgagatca tcgaggccgc cgagcgccac ggcatggcca tggtcataac gggcaagcga
     4201 cagttcagac actagcggtg agaggtgagc ggtgagcggt gagcgggtat tgaattctct
     4261 ggcttccgag cgtccaccct acgtctgggc gctggtgacg acgttggtgg tgttcgcgat
     4321 ctacctggct acgctggctc cgagcaccgc gttctgggac acctccgagt acatcgccgc
     4381 cgccaaggtg ctggggattc cgcaccctcc gggcaacccg ctcttcgtca ttctggcgca
     4441 caccttcggg ctgctgccac tcgccgccgc ctacgcggtg cgcatcaacc tgttcgcggc
     4501 tgccaccagt gccgcagcgg cgggactctg gttcctggtc gccgagcgct ggcttcgaac
     4561 gatcgtcccg catcgctggg cccgctacgg ggctgcgttc ggcggcgtac tggtcggtgc
     4621 cacgtcgtgg acggtctgga accaatcgac cgtaaacgag aaggtctaca ccctctcgct
     4681 gctgtcgatc gccctcgtca tgtggctggt ggtgcgctgg ggcgatgacg agccgggcac
     4741 tcaccgcgac cggtggctgg tactcattgc ttacgtgctc gccctgacgt c
//
LOCUS       DASYRV010000532         4301 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3447902, whole genome shotgun sequence.
ACCESSION   DASYRV010000532 DASYRV010000000
VERSION     DASYRV010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4301
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3447902"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..198)
                     /locus_tag="VGQ24_14115"
     CDS             complement(<1..198)
                     /locus_tag="VGQ24_14115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456030.1"
                     /translation="MSRRVILGLLIGATGCMGNAPPPIPLKPVRFLAINDVYVADTMP
                     DGQGGLARVATVRSRLADQGPI"
     gene            complement(195..812)
                     /locus_tag="VGQ24_14120"
     CDS             complement(195..812)
                     /locus_tag="VGQ24_14120"
                     /inference="COORDINATES: protein motif:HMM:NF024724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEV8456031.1"
                     /translation="MHGYSDRINHAFAFAAKYHGAVAPAGAGMDYLAHPSNVAVILAR
                     YGCDQITIVAGILHHVLEESAPGKRPVLERKISDKFGPVALAVAKDALEPKFDRRGNE
                     RAWQAQKQEYLTQLAIAEPRALDICVADEIHACGSTITALRRLGVEYLRTVSRAGSDQ
                     TIWWYRSMLEILASRPDWPQREMLTELRLMSADLVRSLRQREENR"
     gene            complement(919..1554)
                     /gene="queE"
                     /locus_tag="VGQ24_14125"
     CDS             complement(919..1554)
                     /gene="queE"
                     /locus_tag="VGQ24_14125"
                     /EC_number="4.3.99.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase"
                     /protein_id="HEV8456032.1"
                     /translation="MTYSVKEIFYTLQGEGANTGRAAVFCRFAGCNLWTGREQDRHLA
                     TCQFCDTDFVGTDGPGGGRFASPGELAAAVAAAWPPDQSGRRFVVCTGGEPLLQLDSK
                     LLQALHGEGFEIAVETNGTLPPPDGVDWLCVSPKAGAELVVTSGDEIKLVFPQAGAEP
                     DQFEQLGFRHYFLQPMDGPDREANTAAALQYCLAHPRWRLSLQTHKLLGIP"
     gene            complement(1714..2421)
                     /gene="queC"
                     /locus_tag="VGQ24_14130"
     CDS             complement(1714..2421)
                     /gene="queC"
                     /locus_tag="VGQ24_14130"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HEV8456033.1"
                     /translation="MTKPAAVVLLSGGMDSATTAAIALNRGFDGHALTFRYGQRHAAE
                     LEAARRVVEHLGIRRHVVLDIDLRAFGGSALTGELNLPKDTPLEEIGQRIPPTYVPAR
                     NTIFLAFALGWAEVLGAADIFMGANAMDYSGYPDCRPEYIRAFQDMANLATRAAVEEG
                     RRMTIHTPLISLSKREIIERGLALGVDYGITLTCYDPSSDGAACGRCDACQLRLKGFR
                     EAGVEDPAPYQAVSGER"
     gene            complement(2418..3329)
                     /locus_tag="VGQ24_14135"
     CDS             complement(2418..3329)
                     /locus_tag="VGQ24_14135"
                     /inference="COORDINATES: protein motif:HMM:TIGR01777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HEV8456034.1"
                     /translation="MTGASGLLGSAVRRRLEAAGHRVSRLVRRTAGPGEISWDPAAGS
                     LNPAALEGIDAVVHLSGENVGARWTTARKARIRSSRVASTRLLSETLAGLQRPPQVMV
                     SASAVGIYGNRGDEVLTEESPLGDPDRDFLVAVTREWEKAAEPARVEGIRVVHSRFGV
                     VLSPAGGALKKMLLPFRLGLGARLGSGKQWMSWISIDDAVQAVHQALIDDGLQGPVNV
                     TSPEPVTNRDFTRTLARVLSRPALFAVPESALRLALGEMARATILSSARVVPARLLQA
                     GYRFGQPDLESALRHVLHQDGQDNFPP"
     gene            3594..4094
                     /locus_tag="VGQ24_14140"
     CDS             3594..4094
                     /locus_tag="VGQ24_14140"
                     /inference="COORDINATES: protein motif:HMM:NF012774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HEV8456035.1"
                     /translation="MRFALLSLALAAAPLAYASSQGQEEGCVVLRVADGDTFTCRDGR
                     KVRLIGIDSPESQQQPHGARARKALLQLLPPAAAVRLEFDVAPTDRYGRFLAYVWVGP
                     ALVNEAMVRDGWAVLYTVPPNVKYAERLTRAQKEARARGAGLWSQRGFECLPNDFRSK
                     RCVSSP"
     gene            complement(4081..>4301)
                     /locus_tag="VGQ24_14145"
     CDS             complement(4081..>4301)
                     /locus_tag="VGQ24_14145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456036.1"
                     /translation="KAEDFGRWAETGMKGPPPAEPLGGVGFLDKGLQGSFTADLTPGD
                     YGFICFVPDAKDGKPHLAHGMMRTITVN"
BASE COUNT          729 a         1461 c         1376 g          735 t
ORIGIN      
        1 gatgggtccc tggtcggcca ggcggcttcg taccgtggca acccgggcca gcccaccctg
       61 tccgtcgggc atggtgtcgg ctacgtagac gtcgttgatc gcgaggaagc ggaccggctt
      121 gagcgggatc ggtggcgggg cgttgcccat gcacccggtc gcgccgatca ggagaccgag
      181 gatgacgcga cggctcaccg attttcctct ctctgccgaa gacttcgcac cagatcggca
      241 ctcatgagcc gcagctcggt caacatctct cgttgaggcc agtccggacg gctggccaga
      301 atttccagca tcgagcggta ccaccagatc gtctggtccg agccggcccg cgacaccgtg
      361 cgcaagtact cgacgcccag tcgcctgagt gccgtgatgg tagagccgca ggcgtgaatc
      421 tcatcggcca cacagatgtc gagcgccctg ggttccgcaa tggcgagctg ggtcaggtac
      481 tcctgtttct gggcctgcca ggctcgttcg ttgccacgcc ggtcgaactt gggctccagc
      541 gcatccttgg ccaccgcgag cgcgaccggc ccgaacttgt cgctgatttt gcgctccagc
      601 accgggcgct tgcccggcgc ggattcctcc aggacgtggt gcaggattcc ggcgacgatc
      661 gtgatctgat cgcacccgta tcgcgcgagg atgaccgcca cgttggacgg gtgcgccaga
      721 tagtccatcc cggcaccggc aggcgcgacc gccccgtgat atttggcggc aaaggcgaac
      781 gcgtgattga tccggtcgga atagccgtgc attctcagcg gggcagaggg gcagcggggc
      841 cgcggggcgg caaaagcgca cagaggccga cgctcagcgg aagtacctgt cccgctgccc
      901 gtctgccccg ccgccccgct atggaatgcc gagaagctta tgcgtctgca ggctgagccg
      961 ccagcgcggg tgggccaggc agtattgcag cgcggccgcg gtgttggcct cgcggtcggg
     1021 tccgtccatc ggctggagga agtagtggcg gaacccgagc tgctcgaact ggtccggctc
     1081 cgcccccgcc tgtggaaaaa ccagcttgat ctcatcgcca ctggtgacca ccagctcggc
     1141 cccggccttg ggactcacgc agagccaatc gacgccatcc ggcggcggca gggttccgtt
     1201 ggtctcgacc gcgatctcga agccctcgcc gtgcagcgcc tgcaacaact tcgagtcgag
     1261 ctggaggagc ggctcaccgc cggtacagac cacgaagcga cggccggatt ggtccggcgg
     1321 ccaggcggca gcgaccgcgg ccgcgagctc tcccggcgag gcgaaccgcc ctcctccggg
     1381 cccatccgtg ccgacaaaat cggtatcaca aaactggcag gtggccaggt ggcgatcctg
     1441 ttcgcgcccg gtccacaggt tgcagccggc gaagcggcag aacaccgcgg ctcgcccggt
     1501 gttggcccct tcgccctgga gggtgtagaa gatctctttg acggagtaag tcacatgctt
     1561 gtcatccgag ccacattctg gtcatcccga gcgtagcgag ggatcgcccc gtgtgacgtg
     1621 ttttcgagat ctctgttgga cgtgcgccca cccgattcct cgctatgctc ggaatgacgg
     1681 acacgccggc taacgggcac gcctgcttac cgctcaccgc tcaccgctta ccgcctggta
     1741 gggcgccgga tcctccaccc ccgcttcccg gaaccccttg agccggagct ggcacgcgtc
     1801 gcaccggccg catgcggcac cgtcggagct cggatcgtaa cacgtgaggg taatgccgta
     1861 gtccacaccc agggccaggc cgcgctcgat gatctcacgc ttggagagcg agatcaaagg
     1921 agtgtggatc gtcatcctgc gcccctcttc gaccgccgct cgcgtggcca ggttggccat
     1981 atcctgaaag gcgcggatgt actctggccg gcagtcggga tatccgctgt aatccatggc
     2041 gttggcgccc atgaagatgt cagccgcccc cagcacctcg gcccaaccca gcgcaaacgc
     2101 cagaaagatc gtgttgcgag ccggcacata tgtcggggga attcgctgtc cgatttcttc
     2161 cagcggggtg tccttcggca ggttcagctc cccagtgagc gcggagccgc cgaacgcgcg
     2221 aagatcgatg tccaggacta cgtgcctcct gatgcccagg tgctcgacga cccggcgcgc
     2281 agcctccagc tcggcggcgt gccgctgacc gtaccggaag gtaagcgcgt gcccatcgaa
     2341 tccccgattg agcgcgatag ccgcggtcgt ggcagagtcc attccaccgc tcaggagcac
     2401 gaccgccgca ggctttgtca tggaggaaag ttatcctgcc cgtcctggtg cagcacatgc
     2461 cggagggcac tctccaaatc gggctggccg aagcgatagc ccgcctggag cagtctggcc
     2521 ggcacgacgc gggcactcga caggatggtg gcccgcgcca tttcacccag cgcgagccgg
     2581 agcgccgact ccggcacggc aaagagcgca gggcgtgaca gcacccgcgc gagggtacgg
     2641 gtgaagtcgc ggttggtaac cggctcgggc gacgtgacgt tgaccgggcc ctggagaccg
     2701 tcgtcaatca gcgcctgatg aacggcctgc accgcatcgt cgatcgagat ccagctcatc
     2761 cactgcttgc cgctgccgag acgcgcaccg agacccaaac ggaagggcag aagcatcttt
     2821 ttgagcgccc cacccgcggg gctgagcacc acgccgaacc gcgagtgcac cactcgaatt
     2881 ccttcgaccc gggccggctc cgccgccttc tcccattccc gggttactgc tacgaggaaa
     2941 tcccggtcgg gatcgcccag cgggctctct tcggtgagca cctcgtcacc gcggttccca
     3001 tagatcccga ccgccgacgc tgagaccatc acttggggcg gacgctggag accggccagg
     3061 gtctcactga gcaggcgcgt gctcgccacc ctgctggacc ggatgcgcgc cttgcgcgcg
     3121 gtggtccacc gggcaccgac gttctctccc gagaggtgca ccacagcatc gatcccctcg
     3181 agagccgcgg gattcagcga ccccgccgcg ggatcccagg atatctcacc cgggccggcg
     3241 gtccggcgta ccagacggct cacccggtgc cccgccgctt ccagccgccg gcgcaccgcc
     3301 gagccgagca ggccactggc gccggtcact gctacatgaa gtcgagcgct actggcggac
     3361 gaagctgtca tcgcctcagg cctcaggtca cagcaaagca acagcaatca cgaaagcacg
     3421 aaaacacgaa aggcgactcg ccgagccaca cctgcatttg ggaacaagtc acaaatattg
     3481 ttggtggtgt tgttgtttgc ttgtttcttg gtggtttgtt tcctgctttc gtgttttcgt
     3541 gctttcgtga tattcagact cgacgtgcaa tgcatgcctg cagtcccccg acaatgcgct
     3601 tcgcgctcct gagccttgcg ctggcggccg cgcccctcgc gtacgcgtcc tcccaggggc
     3661 aggaggaggg gtgcgtggtt ctgcgggtcg ctgatggcga caccttcacc tgccgagatg
     3721 gccggaaggt gcgtctcatc ggcatcgaca gtcccgaatc ccagcagcag ccccacgggg
     3781 cacgggcgcg gaaggcgctg ctccagttgc tgccgcccgc tgccgctgtg cggctggaat
     3841 tcgatgttgc cccaacggac cgctatggcc ggttcctggc ctacgtctgg gtaggtccgg
     3901 ctctggtgaa cgaggcaatg gtgcgggacg gctgggccgt gctctacacc gtgccaccca
     3961 acgtcaagta tgcggagcgg ctcacccggg cgcaaaagga ggcccgcgca cggggcgcgg
     4021 gcctctggtc ccaacgtggc ttcgaatgcc ttcccaacga ctttcgcagc aaacggtgcg
     4081 tcagttcacc gtgatggtcc tcatcattcc atgggccagg tgcggcttgc catccttggc
     4141 atcgggcacg aagcagatga agccgtagtc tcccggagta agatcggcgg tgaaggaacc
     4201 ctgcaatccc ttatccagga agccgacccc accgagcggc tccgccggcg gcggcccctt
     4261 catcccggtc tcggcccacc ttccgaagtc ctccgccttc t
//
LOCUS       DASYRV010000533         7669 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3024156, whole genome shotgun sequence.
ACCESSION   DASYRV010000533 DASYRV010000000
VERSION     DASYRV010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7669
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3024156"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..922)
                     /locus_tag="VGQ24_14150"
     CDS             complement(<1..922)
                     /locus_tag="VGQ24_14150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456037.1"
                     /translation="MAEPTHPSNQPGSRSAPLQLNSRLATGCVVLFLVPFAAAGTFCA
                     VQAVRLAYAGVWPDAVFLGIGALTFGGVGFGGFVGMRVAYRRMKEAEALQVSHPEQPW
                     LWRGDWASGRIEDATRETLLGAWIFATFWNLVSLPGGYVGVRAALYEGKPAGLVALLF
                     PVVGLWLLARAVHATIRKNKYGISRLELSTIPGVIGRTLAGTIQAPVGLQPAEGFQVS
                     LNCIRRVTTRSGKSSSTSESILWQEERRIGGEQSRDYAGMKTIIPITFQLPPDVEASD
                     TTNPNSRVVWQLQVSANVPGVDYDSTFEVPI"
     gene            complement(922..1785)
                     /gene="sseA"
                     /locus_tag="VGQ24_14155"
     CDS             complement(922..1785)
                     /gene="sseA"
                     /locus_tag="VGQ24_14155"
                     /EC_number="2.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004792 - thiosulfate sulfurtransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-mercaptopyruvate sulfurtransferase"
                     /protein_id="HEV8456038.1"
                     /translation="MTGEFPALVSTQWLGSRLGSPGLRVVDGSWYLPGSGRDPAAEYA
                     AGHIPGAVFFDLDATSDSATSLPHMLPSADAFAARMILLGLSQSDDIVVYDGSGVNLS
                     APRVWWTFRTFGHRRVAVLDGGMQKWRLENRPIERGVIRLPPGQFSATLDPAAIRDLA
                     AVRANLESRAEQLVDLRSRGRFLGKEPEPRPGLRSGHVPGSRNLPFTELVGPDGTMLP
                     PDELRRRVEAAGIDLARPIVATCGSGTSACALVLALNLLGGRAAVYDGAWAEWGGRSD
                     TPIESGLSPEV"
     gene            complement(1782..2750)
                     /locus_tag="VGQ24_14160"
     CDS             complement(1782..2750)
                     /locus_tag="VGQ24_14160"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HEV8456039.1"
                     /translation="MKAVRVHHTGGPEVLRYEDLPKPTPGAGQALIRVTAVGVNFVEV
                     YQRTGLYSTPLPFIPGSEAAGIVDQVADDVTTVKAGQRVASQSFTGAYAEYALAPADR
                     LIVLPDSITERNGAAVMLQGMTAHYLAHSTYVLSSGDACLVHAAAGGVGLLLCQMARR
                     RGAMVIGTVSTEQKAALARAAGADEVIIYTTQDFVSETRRRTGGAGVQVVYDSVGKTT
                     FLKGLDCLARRGMMVLYGQSSGPVDPFDPQILNQKGSLFLTRPSLAHYVSTRAELLER
                     ATAVLGWVAEGTLEVRIHREFPLADAVEVHRELESRRTTGKLLLIP"
     gene            complement(2772..3464)
                     /locus_tag="VGQ24_14165"
     CDS             complement(2772..3464)
                     /locus_tag="VGQ24_14165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456040.1"
                     /translation="MTGSTDGHSSPRGAETTGRIVVALFEERSEAEDAIRDLKSAGFT
                     NEQIGVATQERAGAADARSAGEARGDGTPAEDEPERIVEDTASGLAEGAAVGALTGGV
                     IGGLVGLVSSLLIPGVGPLVVGGVLASTLMGLGVGAATGGLIGALVGMGVPEEDARYF
                     DAGLREGRTLVTVSAMEGAPEALAILERHGGDLGPSRARGSTGSASFQGQERRSGSDA
                     AYTGPERRLVGV"
     gene            complement(3623..4879)
                     /locus_tag="VGQ24_14170"
     CDS             complement(3623..4879)
                     /locus_tag="VGQ24_14170"
                     /inference="COORDINATES: protein motif:HMM:NF016032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-cysteine ligase family protein"
                     /protein_id="HEV8456041.1"
                     /translation="MSTLTRAVLATQLADSTFAGPVSASLTPRRLGAEVEFIPVESLS
                     GRRCPIEGEGMLATLPFLRRYGLRQGWHEGSTSKGTPCFSSPIGGSLTFEPGGQLEYS
                     SPPCRSASALLALLRAVVLPLRAAAAGEGINLLPVGIDPINPAEEAPLLIHAKRYARM
                     AEYLGRRGPAGARMMRQTAAFQVSLDFDDEPWLRWRVLNAATPYVTAIFANSPIYAGE
                     RTNHQSTRAQVWRAVDPTRTGIPYDERDPVGAYLEFALAAPAILYPAIEGEHRPFGEW
                     LARTNPTPDEWQDHLSTLFPEVRPRGHLELRSADSIAPHWYAAPLALTAGILYDPAAL
                     RATADLLGTPDLGLLERAGRCGLHDPAIARMAVDLFEVALQGCSGLGSRYFHPSDLEQ
                     ATAFFERYTRRGRSPADDMLEAAIAA"
     gene            complement(4876..5862)
                     /gene="egtD"
                     /locus_tag="VGQ24_14175"
     CDS             complement(4876..5862)
                     /gene="egtD"
                     /locus_tag="VGQ24_14175"
                     /EC_number="2.1.1.44"
                     /inference="COORDINATES: protein motif:HMM:NF021530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030745 - dimethylhistidine
                     N-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-histidine N(alpha)-methyltransferase"
                     /protein_id="HEV8456042.1"
                     /translation="MTSSIQPKWGRTAVRAQRQPNPRMLAEVAAGLAAPQKELPPKYF
                     YDHRGSELFEEITRLPEYYPTRTERSLLESWMPTLISELGTRTLVELGAGSAEKSRII
                     LSAMRAAGTTGLYVPIDVSASFLEQTAGRLRREYPGLRVEPTVADISEEFDLPRAVPH
                     PALYAFLGGTIGNFYPPGAIRLLQRVRSVMHSADRFLMGVDLRKDVRLIEAAYNDSRG
                     VTAEFNRNMLLVLNHELGANFDPDTFEHRAFYESVTHRIEMHLVSKVEHEVRVPGIGL
                     VAFRQGESIRTEISCKHDRRSVGELFAAAGLRIEIWRPDPDALFALVVGAAV"
     gene            complement(5855..7174)
                     /gene="egtB"
                     /locus_tag="VGQ24_14180"
     CDS             complement(5855..7174)
                     /gene="egtB"
                     /locus_tag="VGQ24_14180"
                     /inference="COORDINATES: protein motif:HMM:TIGR03440.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ergothioneine biosynthesis protein EgtB"
                     /protein_id="HEV8456043.1"
                     /translation="MTAIAAPSRIDPRLIADQLLEARARTLLLLAPLTDEELRAQHDP
                     LMSPILWDLGHIAYFEELWLTRNLQGPIEFVEMPGLFNPFEHPRSERGALPLPGLAHC
                     REIMDEIRGRVLGRLAITDFDPANPLLRDGYVYHMVLQHEYQHNETILQTLQLKQGRP
                     YSPALRYDVPDDGPVPGSAEMTRFPGGAVEIGTDDRAWAYDNERGSHTVQLAPFWIDV
                     HPVTNGEFEGFMNAGGYSNPEYWSGAGWDWLQSSAVTAPKYWTRVDDAWMTRSMDRAG
                     RVPASHPVCHVCYYEAEAFARYAGKRLPTELEWEAAASWNPEAGAKQNFPWGDQPASK
                     DLANIDQLSFGTTPVGSYSKNLSPIGCSGMIGDVWEWTSSDFQPYPGFESFPYKEYSE
                     AFFGGEYKVLRGGSWATRPGAIRNTFRNWDYPIRRQIFSGFRCARDD"
     gene            7372..>7669
                     /locus_tag="VGQ24_14185"
     CDS             7372..>7669
                     /locus_tag="VGQ24_14185"
                     /inference="COORDINATES: protein motif:HMM:NF014821.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ada metal-binding domain-containing protein"
                     /protein_id="HEV8456044.1"
                     /translation="MSVTEHHPASTADQRRWEAVLERNPRQDGKFVYGVASTHIYCRP
                     SCPSRRPARRRVSFFPTPDAAEAAGYRACRRCEPRSARRISDRQVQRAREYLDEH"
BASE COUNT         1372 a         2545 c         2493 g         1259 t
ORIGIN      
        1 agatggggac ctcgaaggta gagtcgtagt ctacgcccgg gacgttggcc gaaacctgaa
       61 gctgccatac cacccggctg ttcggattgg tggtgtcgct ggcctcgacg tcgggaggaa
      121 gctgaaaggt tatggggatg atggtcttca tgccggcgta atcgcggctc tgctcacctc
      181 cgatccggcg ttcttcctgc cagagaatgc tctccgatgt cgagctgctc ttcccgctcc
      241 gggtggtcac ccggcggata cagttcaggc tgacctgaaa cccttcggcc ggctggagac
      301 cgactggggc ctggatggtg ccggcgagag tgcgaccgat gacgccggga atggtcgaga
      361 gctcgagccg cgagatgccg tacttattct ttctgatcgt cgcgtgcacc gccctcgcca
      421 gcagccagag accgaccacc ggaaacagca gggcaacgag gccggccggc ttcccttcgt
      481 atagcgccgc ccgcacccca acgtagcctc ccgggaggct gaccaggttc cagaacgtgg
      541 cgaagatcca ggcgcccagc agcgtctccc gggtagcgtc ttctattcgc cccgatgccc
      601 aatccccgcg ccaaagccac ggctgttccg ggtgggagac ctgcaacgcc tctgcttcct
      661 tcattcgtcg gtacgccacc cgcatcccga cgaacccacc gaatcccacg ccaccgaagg
      721 tgagcgcgcc gatgccgagg aacacggcgt cgggccagac accggcatag gccagccgta
      781 cggcctgcac cgcgcagaac gtgcccgccg ctgcgaacgg cacgagaaaa aggacgacgc
      841 agcccgtcgc cagccgggag ttgagctgca gcggagcact gcgactgcct ggctggttgg
      901 aggggtgcgt cggttcggcc atcaaacctc cggtgacaag cccgattcta tcggagtatc
      961 ggaccggccg ccccactcgg cccaagcacc atcgtagacg gccgcccggc cgccaagcag
     1021 gttgagcgcc aggaccaggg cacaggcgct ggtccccgaa ccgcacgttg caacgatggg
     1081 ccgggcgaga tcgatgcctg ccgcctcaac ccgccggcgc agttcgtcgg gtggcaacat
     1141 ggtcccgtcg ggaccaacca gctcggtgaa ggggaggttc cggctcccgg gcacgtgtcc
     1201 gctacggagg cccggtctgg gctccggctc tttcccgaga aagcgacccc tggaccggag
     1261 gtccaccagc tgttcggcgc ggctctcgag gttggcacgc accgcggcga gatcccggat
     1321 cgccgccgga tcaagcgtag cgctgaactg gcccgggggc agccgtatca cgccacgttc
     1381 aatcggacgg ttttcgagac gccacttctg catgccgccg tccagcaccg ccacccgacg
     1441 gtgcccgaac gtgcggaagg tccaccagac ccgcggcgca ctcaggttca ctccggaccc
     1501 atcgtagacg acgatgtcat ccgactggct caggcccagt aggatcattc gagcggcgaa
     1561 ggcatccgcc gaagggagca tatgagggag cgaggtagcc gaatcgctgg tcgcgtccag
     1621 gtcgaagaac accgcacccg gaatgtggcc tgcggcatac tctgccgcgg gatcgcgacc
     1681 gctccccggc aagtaccacg acccgtccac cacccgcaga ccgggtgagc ccaagcggga
     1741 ccccaaccac tgggtcgaga ccagcgccgg aaactcgcca gtcacgggat cagcagaagc
     1801 ttgcctgtcg tacgtcgtga ttcgagctca cgatgaacct ccaccgcgtc ggccagagga
     1861 aactcccggt gtattcgcac ctcgagtgtg ccctccgcca cccagccgag caccgctgtc
     1921 gcgcgctcga gcagctcggc ccgggtcgag acgtagtggg ccaggctggg ccgggtgaga
     1981 aagagcgagc ccttttgatt gagtatctga gggtcgaatg gatccaccgg gccgctcgac
     2041 tgaccgtaga gcaccatcat gccgcgccgg gccaggcaat ccagaccctt gaggaacgtt
     2101 gtcttgccca cggagtcgta cacaacctga accccggccc caccggtccg tcgccttgtt
     2161 tcgctgacga agtcctgggt ggtataaatg atcacctcgt cggcacctgc cgcgcgtgcc
     2221 agggcggcct tctgttcagt tgagacggtt ccgatcacca tggcaccgcg ccgccgtgcc
     2281 atctggcaga gcagcaatcc cacgcccccg gccgcggcat ggaccagaca cgcatcgccg
     2341 gaggacaata cgtacgtcga gtgggccagg taatgggccg tcattccctg gagcatgacc
     2401 gccgcaccgt tgcgctcggt gatgctgtcc ggcagaacaa tcagccgatc ggccggtgcg
     2461 agcgcgtact cggcataggc accggtaaaa ctctgcgagg cgactcgctg gcctgccttc
     2521 acggtggtga cgtcgtcggc tacctggtcg acgataccgg cggcctcgga tccgggaatg
     2581 aaggggagcg gtgttgaata gagccccgtc cgttgataca cctcgacgaa gttcacccca
     2641 accgcagtga cccgtatcag ggcctgtccc gcacccgggg ttggcttggg aaggtcttca
     2701 tacctcagga cttcaggacc accggtgtgg tgaactcgga cggctttcac gggttccccg
     2761 gtgggttgag ctcagacacc caccaggcgc cgttccggtc cggtgtacgc ggcatcggaa
     2821 ccggaccgcc gctcctggcc ttggaaagag gccgagccgg ttgagccacg cgctctggag
     2881 ggacccagat ctccgccgtg gcgctcgaga atcgcgagcg cttcaggcgc cccttccata
     2941 gcgctcaccg tcaccagggt cctgccttcg cgcaggcctg catcgaaata cctggcatcc
     3001 tcttccggca cccccatgcc gaccagcgcc ccgatcagcc cgcctgtcgc tgcgccgaca
     3061 cccagcccca tgagggtgga cgcgagcacc cctccgacca ccaacgggcc gacgcccggg
     3121 atcagaagcg agctgaccag ccccaccagg ccgccgatga cgccgccggt gagcgcgcca
     3181 accgcggcgc cttcggccaa cccgcttgcg gtgtcctcca caatccgctc cggctcatcc
     3241 tcggcgggcg ttccgtcgcc gcgagcctct cctgcacttc gagcatctgc ggccccggcc
     3301 ctctcctgag tggcaacgcc gatctgctcg ttggtgaatc cggcactctt gagatcgcga
     3361 atagcatctt cggcctcgga gcgttcctcg aacaacgcca ccacgatccg gccagtcgtc
     3421 tcggcacctc tcggcgagct gtgcccatca gttgaccccg tcatgtcacc tcacctccgc
     3481 cctggcgtaa cctcggtacc gtgcgctctc gtgcggagcg ctccggttga ccggtaattg
     3541 gaaacgaacc gacatagtaa gggagggaac agaccgggtt ggtgaccacg ctcacacgaa
     3601 tggcacgcgg agctggcgga gatcaagccg cgattgctgc ctccagcatg tcgtcggcgg
     3661 gtgagcggcc ccggcgagta tagcgctcga agaacgcggt agcctgctcc aggtcggaag
     3721 gatggaagta ccgggaaccg aggccgctgc aaccttggag tgccacttcg aagaggtcca
     3781 cagccatgcg ggcaatcgca ggatcgtgca gcccacaacg gccggcgcgc tcgagcagcc
     3841 ccagatcggg agtgcccagg agatcggccg tggcccggag cgcggcaggg tcgtaaagga
     3901 ttccggcggt gagcgcgagc ggagccgcat accagtgcgg cgcaatggag tcggcggacc
     3961 gaagctccag atggccccgg gggcgcacct cggggaagag cgtgctgaga tggtcttgcc
     4021 attcatcagg cgtcggatta gttcgggcca accactcacc gaacggccgg tgttctccct
     4081 cgattgccgg gtacaggatg gccggggcgg ccagcgcaaa ctccagatac gcaccgaccg
     4141 ggtctcgctc gtcgtaggga atgccggtgc gcgtcgggtc gactgcacgc cagacctgcg
     4201 ctctcgtgct ctggtgattg gtgcgttcgc cggcgtagat cggagagttc gcaaagatcg
     4261 ctgtcacgta cggggtcgcc gcgttgagca cccgccagcg gagccagggt tcgtcgtcga
     4321 aatccagact gacctggaag gcggccgttt gccgcatcat cctcgcgccc gcgggacccc
     4381 gccgtccgag gtactcggcc attcgcgcgt agcgcttggc gtgaatcagc aggggagcct
     4441 cttccgcggg gttgatgggg tcgatgccga ccggcagaag attgatcccc tcaccggccg
     4501 cggcggcgcg gagcggaagt accaccgcac ggagaagtgc gagcagcgcg ctggccgaac
     4561 ggcacggtgg cgagctgtat tcgagttggc ccccgggctc gaacgtgagc gatccgccga
     4621 tgggcgagct gaagcacggg gttcccttgg aggtagagcc ttcgtgccag ccttgcctca
     4681 gaccataacg gcgaaggaac ggaagagtgg ccagcatgcc ctccccctcg atcgggcagc
     4741 ggcgtccgct gagtgactcc accggtatga actcgacctc cgcgccaagc cggcgcggcg
     4801 tgagcgaggc gctgactggg cccgcgaacg tgctgtcggc aagctgtgtg gccagaaccg
     4861 cgcgggtcag ggtgctcata ccgcggctcc cacgacgagc gcgaagagcg cgtcgggatc
     4921 gggccgccag atctcgatgc ggaggcccgc ggccgcgaac agttcgccca cgctccggcg
     4981 atcgtgcttg cagctgatct cggttcggat tgattcgccc tgcctgaagg ccaccaggcc
     5041 aatccccggc acccttacct cgtgttccac cttcgagacc agatgcatct cgatccggtg
     5101 ggtcaccgac tcgtagaagg cccggtgctc gaacgtgtcg ggatcgaaat tggctcctag
     5161 ctcgtggttg agcaccagca gcatgttccg gttgaattcg gccgtgaccc ctcgggagtc
     5221 attgtaggcc gcctcgatca gccgaacgtc cttcctgagg tccacgccca tgaggaagcg
     5281 gtcggcggag tgcatcaccg aacgcacgcg ttgcaggagc cggatcgccc cgggtggata
     5341 aaaattgccg atggtaccgc cgagaaaggc atagagagca ggatgcggca ccgctcgggg
     5401 gaggtcgaac tcctccgaga tgtcggccac cgtgggctcc accctcaagc ccggatactc
     5461 ccggcgaagc cggccagcgg tctgctccag gaagctggcg ctgacgtcga tcggcacgta
     5521 cagaccagtc gtcccggccg ctcgcatcgc actgaggatg atgcggctct tctccgcgct
     5581 gccggcgccc agctcgacca gtgtccgggt accgagctct gaaatgagcg tgggcatcca
     5641 gctttcgagc agtgaccgct cggtgcgcgt ggggtagtac tcgggcagcc gagtgatctc
     5701 ctcgaacagc tcggagccac ggtgatcgta gaagtacttg ggcggaagct ccttctgcgg
     5761 agccgccagc cctgctgcga cctcggccag catccgcgga ttgggctgcc gctgtgcccg
     5821 gaccgccgta cggccccact tgggttggat cgagctagtc atcgcgagcg cacctgaagc
     5881 cgctgaagat ctggcggcgg atagggtagt cccagttccg gaaggtgttc cggatagcgc
     5941 ccggtctcgt ggcccacgaa ccaccacgca gtaccttgta ttcgccgccg aagaacgctt
     6001 cggagtactc cttgtaagga aagctctcga agcctggata cggctgaaaa tcgctcgagg
     6061 tccactccca gacgtcgccg atcatcccgg aacacccgat cggcgacagg ttcttcgaat
     6121 agctccccac cggtgtcgtg ccgaaggaca attgatcgat gttcgccaga tccttcgacg
     6181 cgggttggtc tccccaggga aagttttgct tggcgccggc ctcggggttc caggacgcgg
     6241 cggcctccca ctccagctcc gtcgggagcc gcttgcccgc gtacctcgcg aaagcttccg
     6301 cctcgtagta gcagacgtga cagacggggt gagacgccgg cactcggccg gcccggtcca
     6361 tggatcgggt catccaagca tcgtctaccc tggtccaata tttcggcgcg gtaacggccg
     6421 atgactgcag ccaatcccag ccggcgccgg accagtactc agggttcgaa tatccacccg
     6481 cgttcatgaa accctcgaac tcaccgttgg tcaccgggtg cacgtcgatc cagaacggag
     6541 ccagctggac ggtgtggctg ccccgttcgt tgtcgtacgc ccaagcgcgg tcgtccgtgc
     6601 cgatttcgac ggcaccgccc ggaaagcggg tcatctcggc agaacccgga accggcccat
     6661 cgtcggggac gtcatagcgc agcgccgggg agtatggccg accctgcttc agctggagtg
     6721 tctgcaggat ggtctcgttg tgctggtatt cgtgctggag caccatatgg tagacgtaac
     6781 catcccggag cagtggattg gctgggtcga agtcggtgat ggccagacgg ccgagcaccc
     6841 ggccccggat ctcgtccatg atctcgcggc agtgagccag ccccgggagg ggcagcgcgc
     6901 cacgctcgct gcgggggtgc tcgaagggat tgaagagtcc cggcatctcg acgaactcta
     6961 tgggaccctg aaggttacga gtgagccaca gctcctcgaa ataggcgata tgccccaggt
     7021 cccagaggat cggactcatc aggggatcgt gttgcgcccg aagctcctcg tccgtgagcg
     7081 gcgcaaggag cagcaacgtc ctggcgcggg cttcgagaag ctgatcggct atgaggcgag
     7141 ggtcgatccg gctgggggcg gcaatcgcag tcatgggatc tccggggcct ggtccggctc
     7201 aggccgtcga gaggcctatc cttatgatac ggcggttcca gcaggtccgc gagttggtac
     7261 gacgcagtgc cggttgtgtg taacgaccgg ccggctcagg aagttccagc gcaagaaccg
     7321 ggtagtgaga aacggcacgt catagtacga tcatggcacg aggggggagc catgtctgtg
     7381 acggagcacc acccggcctc cacggccgat cagagacgat gggaagcggt gctggagaga
     7441 aatccccgcc aggacggaaa gttcgtctat ggtgtggctt ccacccacat ctactgccgg
     7501 ccttcctgcc cttcacgccg gcccgcgcgg cgccgggtga gcttcttccc caccccggac
     7561 gccgccgagg ccgcgggata tcgggcatgc cgccggtgcg agccacgcag cgcccggcgc
     7621 atctcggacc ggcaggtaca acgtgcgcgt gagtatctcg atgagcact
//
LOCUS       DASYRV010000534         1807 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1155430, whole genome shotgun sequence.
ACCESSION   DASYRV010000534 DASYRV010000000
VERSION     DASYRV010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1807
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1155430"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1080)
                     /locus_tag="VGQ24_14190"
     CDS             complement(<1..1080)
                     /locus_tag="VGQ24_14190"
                     /inference="COORDINATES: protein motif:HMM:NF016149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein CopC"
                     /protein_id="HEV8456045.1"
                     /translation="MSRPSVRSGFVLFGAVTLVVIGMATPAQAHAIVTSSQPEPGQRL
                     GTAPGVVVLELSETLNPRLSRATVTDPAGQRFAGGVSGAREIRVSLSTNAQGVYRVEW
                     TTVSTLDGHAVRGSFQFGVGVSPGGAAETGGGATPTREDLFIAVARWVEALALLLAVG
                     MLFLRRLVRGRPELSWARPHSLPPVLLVALAAGVAVVALEAGSAAGSASPAALWSYLS
                     TGLPGLARLLRLGFEALAVAAAFLGAPSLWLWVTGALGALASSGHGAAVHPTWWGITV
                     DAVHLVAAGMWAGGILAMAILRPPSGWRSREAREFLVRFSPPALAAFAVTVGFGAIQA
                     LQELGALQALTGSRYGQVLLAKIALV"
     gene            1215..1472
                     /locus_tag="VGQ24_14195"
     CDS             1215..1472
                     /locus_tag="VGQ24_14195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456046.1"
                     /translation="MKKVAILLLILLLLLVALPLGMSMAMGTCPNSHPATCAAGVSMC
                     LAIIGLLAFALALLLGTVPRGSSPSLSLLLVGSVEHPPRLA"
     gene            1599..>1807
                     /locus_tag="VGQ24_14200"
     CDS             1599..>1807
                     /locus_tag="VGQ24_14200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456047.1"
                     /translation="MSDEHEQDAARQKESGASGPTAVGEAGAAQPQDAKGPRAGSIGH
                     PSGLAGASRRRIRWVLVGVVVAVIT"
BASE COUNT          305 a          610 c          629 g          263 t
ORIGIN      
        1 caccagggcg atcttcgcta ggaggacctg cccgtagcgg gacccggtca gggcttgcag
       61 ggcgccgagc tcctgcaggg cctggatcgc cccaaagcct accgtcacgg cgaaggcggc
      121 gagagccggg ggagagaacc gcaccaggaa ctcgcgggcc tctcggctcc tccatccact
      181 cggtggccgg aggatggcca tggcgaggat tcctccggcc cacattcctg cggccaccag
      241 atggaccgcg tccacggtga tcccccacca ggtggggtga acggccgctc cgtggccgga
      301 ggaagccagg gcgcccaggg ctcccgtcac ccacagccag aggctcgggg caccgaggaa
      361 tgccgcggcc actgccaggg cctcgaaccc cagtcgcagc aggcgggcca agcccggcag
      421 gccggtggag agatagctcc acagggcggc gggagaggcg gacccggcgg ccgacccggc
      481 ctccaacgcc accaccgcca cccctgcggc cagggcgacc aggagcacgg gaggtagaga
      541 atggggcctc gcccacgaca actccggacg gccgcggacg agtcgtcgga gaaagagcat
      601 gcccacggct aggagaagtg cgagcgcctc cacccagcgg gctacggcga tgaacaggtc
      661 ctcccgcgtg ggagtcgctc cgccacccgt ctcggccgct cccccgggcg acacgcccac
      721 cccgaactgg aaggaacccc ggacggcgtg accgtcgagc gtgctgacgg tggtccactc
      781 cacccggtag accccttgcg cgttagtcga gagagagacg cggatctctc gggctccgct
      841 caccccgccg gcgaaccgct ggccggcggg gtcagtaacg gtggctcggg acagcctggg
      901 gttcagggtc tcgctcagct cgaggaccac cacgccgggt gccgtcccga ggcgctggcc
      961 gggctcgggt tgagacgatg tgacgatggc gtgggcctga gccggcgtcg ccataccgat
     1021 cacgaccagg gtcacggcgc cgaacaggac gaaccccgag cgaactgatg gccggctcat
     1081 ggtgctctca cctggatatt cgagcggaag accgccttgg gccatgctat ccgtgcgctt
     1141 cgaactgccg ggctcggcca acggcgaggc tgacggagcc caagggcacc tcatcggata
     1201 gacttaaagg ttggatgaag aaggtcgcca tcctgctcct tatcctgttg ctcctattgg
     1261 tggcgctgcc gctcggcatg agcatggcga tggggacgtg tccgaactcg cacccggcga
     1321 cgtgtgcggc cggtgtgagc atgtgcctgg cgatcatcgg gctcctggcc ttcgccttgg
     1381 ccctcctgct cgggaccgtt cccagaggtt ccagccccag cctcagcttg ttgcttgtcg
     1441 gctcggtcga acacccgcct cgtctcgcgt agccacatct cagggcttca ccatgccctg
     1501 agtacccatc ggactccgta cgagatgagg ggagcgaacc gaatgcgatt cgtacttggt
     1561 ttcctgatgc aggtgcaacg tctcgcaccg tgacacagat gagcgacgag cacgagcaag
     1621 atgccgctcg gcagaaggag tcaggcgcct cgggcccgac ggcagtcggg gaggcagggg
     1681 cggctcagcc ccaggatgcg aagggaccgc gggctgggtc gatcggccac ccttccggcc
     1741 tggcgggcgc gtcgcggcgc cggatccgat gggtgctggt tggtgtagtg gttgctgtca
     1801 tcacgtt
//
LOCUS       DASYRV010000535         2972 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2819623, whole genome shotgun sequence.
ACCESSION   DASYRV010000535 DASYRV010000000
VERSION     DASYRV010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2972
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2819623"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..69)
                     /locus_tag="VGQ24_14205"
     tRNA            complement(1..69)
                     /locus_tag="VGQ24_14205"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36..38),aa:His,seq:gtg)
     gene            403..771
                     /locus_tag="VGQ24_14210"
     CDS             403..771
                     /locus_tag="VGQ24_14210"
                     /inference="COORDINATES: protein motif:HMM:NF016154.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YetF domain-containing protein"
                     /protein_id="HEV8456048.1"
                     /translation="MSANYQSLTDGLVLMATIVFWSLAMNAAAYRWAWVARPMKPKPV
                     LLIEGGRFRRRNMRRELVTEEELRSELRKRGVHDLAGLESVQMESDGEISVVPKETGE
                     EGQAGKDRQKRQGRYRSSRR"
     gene            complement(772..1479)
                     /gene="orn"
                     /locus_tag="VGQ24_14215"
     CDS             complement(772..1479)
                     /gene="orn"
                     /locus_tag="VGQ24_14215"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF003765.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000175 - 3'-5'-RNA exonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HEV8456049.1"
                     /translation="MADSKQGGCVADYLVWIDCEMTGLDLRRDALIEVAALVTDAELT
                     VLGEGVDVVIKPPQPTVDQMDDVVRAMHTASGLLAELDRGVSLGEAEDLVLSYVRQFV
                     AEPRKAPLAGNSVATDRGFLARDMPTLEGHLHYRMVDVSSVKELAKRWYPRAYFNSPG
                     KTGNHRALADIRESIQELRYYRQAIFVPPPGPDSETAKAIAGAITGTPPPDRAEPPSE
                     TTPNRLIPEEPGQVVDD"
     gene            complement(1498..2199)
                     /locus_tag="VGQ24_14220"
     CDS             complement(1498..2199)
                     /locus_tag="VGQ24_14220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456050.1"
                     /translation="MSEHRDSQRGGPRQPDVVRECLGWGAFATVVVPAVLILTGADVT
                     TAALGAGAVAAVTASIFVVVRMTGLSLPQLRTGETADIPALPQQEPPEPAWGPDPVGA
                     EQFSSAPEQPWPPVPVGQTWHEPWDTDWNDEHAWIPDIPQQPWEGTEYDTAASVPHVG
                     DMPPPPPPWLPLAEPNGLAPAPYPNQDDGRLPWDHDRGFAEVYHPPEPWLPEPRVDES
                     ELHPAEQRGRHRRGP"
     gene            complement(2285..>2972)
                     /locus_tag="VGQ24_14225"
     CDS             complement(2285..>2972)
                     /locus_tag="VGQ24_14225"
                     /inference="COORDINATES: protein motif:HMM:NF013155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456051.1"
                     /translation="SPFERLSLGLDPDELFSGYCDGAQQAREELGIEVRLTPDIARNT
                     DPIAIEQVVPFAVKYRERGVVGLGLGGSEAEYPPELFTRCFDIARAGGLGSVPHAGEV
                     SGSSSIRRALDALHADRIRHGIHAVDDPVLLAELADRGIVCDVCPTSNVRTGAVRSLD
                     EHPLPHMVEAGVRCTVNTDDPAMFGTDLGREYSQLDRLGITAKQAYDAGVAGALCDEA
                     TKARLRSVWP"
BASE COUNT          493 a          974 c         1003 g          502 t
ORIGIN      
        1 tgagtgaggg gactcgaacc cccgacaccc gggaccacaa cccggtgctc taccagctga
       61 gctacaccca ccatgtgacc tgcgccgcag caagtgtacc ggcgccaccg tctggctcgc
      121 gcagagatca ttaacgtccg accacggggc gcttgtttcc gcctcctggc tgatcaagag
      181 ctactcgggt acgaacccag ccggatcatg acggatcccg gaggtggata tatgagcgtc
      241 gactggcgcg aaatactccg cccggacgta ccacttcatc cggggatcgg tcatcaatct
      301 cgtcgccttc actctgctgc gcggcttccc acgggagagt ggatcaacga gtacgaccga
      361 cctgctcgtc ttggtgctca tcgcggatgc gggcaaaacg gaatgtcggc gaactatcaa
      421 agcctgaccg acgggctggt cctgatggcg acgattgtct tctggtcgct cgcgatgaac
      481 gccgccgctt atcgctgggc ctgggtggct cggccgatga agcccaagcc ggtcctgctg
      541 atcgagggtg ggcggttccg ccgccggaac atgcgccgcg agctggtcac cgaggaagag
      601 ctgagatctg agcttcgcaa gcgcggggtt catgaccttg ccggcctgga gtccgtccag
      661 atggagtctg acggggagat cagcgtcgtg ccgaaggaga ccggcgaaga gggccaggcg
      721 ggcaaggatc gtcagaagcg gcaaggccgc tatcggagca gccgacggtg atcagtcatc
      781 gaccacttgg ccgggctcct ccgggatcag gcggttggga gtggtttcgc tgggcggctc
      841 agcgcggtcg ggcggcgggg tgccggtgat cgcgccggcg atcgctttag ctgtctccga
      901 gtctggcccc ggcggaggta cgaagatcgc ttgacggtag tagcgcagct cctggatgct
      961 ctccctgata tcggcgagtg cccggtggtt cccggtcttg cccggagagt tgaagtacgc
     1021 ccgcggatac caccgcttgg cgagctcctt gacgctcgac acgtcaacca tccgatagtg
     1081 cagatgaccc tcgagcgtcg gcatgtcccg ggcgaggaat ccacggtcgg tcgccaccga
     1141 gttcccggcc agcggcgcct tccgtggctc cgcgacgaac tggcggacgt acgacagcac
     1201 gagatcctcg gcctcaccaa ggctgactcc gcggtcgagt tcggcgagca ggcctgaggc
     1261 ggtgtgcatg gcgcggacga cgtcgtccat ctgatccaca gtcggctgcg gtggctttat
     1321 aaccacgtcg accccctcac cgagcacggt cagctccgca tcggtgacca aggccgcaac
     1381 ctcgattaac gcgtcgcggc ggagatcgag accggtcatc tcgcagtcaa tccagaccag
     1441 gtagtcggcc acgcaccctc cctgcttgct gtcggccatg tccgtgtgcc tgccacccta
     1501 cggcccgcgg cggtgccgtc cgcgctgctc agcgggatga agctcactct cgtccaccct
     1561 gggctccggc agccatggct cgggagggtg atagacctcc gcgaagcccc ggtcgtggtc
     1621 ccatggcagg cgcccgtcgt cttggttcgg gtacggcgcg ggcgccaggc cgtttggctc
     1681 ggcgagcggg agccagggcg gtggtggcgg cggcatgtcg ccaacgtgcg gcaccgatgc
     1741 ggctgtgtcg tattcggttc cctcccacgg ctgctgcggg atgtcgggaa tccatgcgtg
     1801 ctcgtcgttc cagtccgtgt cccacggctc gtgccatgtc tggccaacgg gcaccggcgg
     1861 ccagggttgc tccggtgcac tggaaaactg ctcggctccc acgggatcag gaccccacgc
     1921 cggctctggc ggctcctgct gtggaagagc cggtatatcg gcggtctcgc cggtccggag
     1981 ctggggaagc gaaagcccgg tcatccgtac gacgacgaag atcgatgcgg taacagctgc
     2041 aactgcgccc gcacccaacg ccgctgtggt gacatccgcg ccagtcagga tgaggacggc
     2101 ggggacgacc actgtcgcaa acgcgcccca tcccaggcac tcgcgtacga cgtccggttg
     2161 ccgaggcccg ccgcgttggg agtcgcgatg ctcggacacg gcagccagcg tagaggcttg
     2221 ccgtcgcttg gcgatgggtg ctttcgcact tcggttcgcc gccggtccac accggggcgg
     2281 cggtttaagg ccagactgag cggagcctcg ccttcgtcgc ctcgtcacag agggcccctg
     2341 cgacaccggc gtcgtacgcc tgcttcgcgg tgatcccgag ccggtccagc tgcgagtact
     2401 cgcggcccag gtcggtaccg aacatcgccg ggtcgtccgt gttcactgtg cagcgcacac
     2461 ccgcctcgac catatgcggc aacggatgct cgtcgagcga gcggaccgct ccagtgcgga
     2521 cgttcgatgt cgggcagacg tcgcagacga tgccgcgatc ggcgagttcg gcaagcagga
     2581 cgggatcatc gactgcgtgg atgccgtgcc tgatccggtc ggcatgcagc gcatcgagcg
     2641 cccgccgtat ggacgaagat ccagagacct cgccggcatg tgggaccgag ccgagcccgc
     2701 cagctctcgc gatatcgaaa caacgggtga acagctcggg cgggtactcg gcttcggaac
     2761 caccgagccc aaggcccacg acaccacgct cccggtattt gacggcgaag ggcacgacct
     2821 gctctatcgc gatcggatcg gtgttgcggg cgatgtcggg cgtcaaccgg acctcgatgc
     2881 ccagctcctc gcgggcctgc tgcgcgccgt cgcagtagcc ggagaacagc tcgtcgggat
     2941 cgagccccaa ggagagccgt tcgaacggcg aa
//
LOCUS       DASYRV010000536         3594 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1994732, whole genome shotgun sequence.
ACCESSION   DASYRV010000536 DASYRV010000000
VERSION     DASYRV010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3594
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1994732"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1412)
                     /locus_tag="VGQ24_14230"
     CDS             complement(<1..1412)
                     /locus_tag="VGQ24_14230"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEV8456052.1"
                     /translation="MRLLLIQPPQGTRFGFTRILMVEPLGLECLGSALKLHGHEVTLI
                     DLRLDRSTALRSALTSPRPDAVGISCGFTTDVYSTLWTARAVKETIPGTPVFVGGHHA
                     SLIPGDFLFPGSPVDAVVIGEGEWTGLELADALERHDDPASVPGVLTLENRNGGYKQR
                     VHSTSLDDLPLPDRRLTLRYRRRYHHAFDTPSACVETSRGCPFDCNFCSIWVFYQRRA
                     RRRSPERIVEDLEQVRALGEDRVFFTDDIAFLQHDAYEELGLRIKEAGLKHLYSCETR
                     ADLVVRYRDLFGLWKEAGLKTVFLGIEKVDDSGLDSIRKRTKGGAATNLEAIEILKSH
                     HITPMTSLITDPAWGEEDFDRLEEFLRLADIPCPTFTILTPLPGTELWESRKHELITD
                     DYSLFDVMHLVLPSKLPPERFYERFAGLYCRVDKTARLTWPAIRNLTKLLLRGKSFAV
                     RRVLKAARELRDPRAFIAYSG"
     gene            1730..>3594
                     /locus_tag="VGQ24_14235"
     CDS             1730..>3594
                     /locus_tag="VGQ24_14235"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE1 domain-containing protein"
                     /protein_id="HEV8456053.1"
                     /translation="MRPRVALPQPVKYLLTSALLAIVYYGAARLGLRYASIGQSISLV
                     WPPTGIAFAALTLLGYRYWPGVALGAFLANASTPVPLLGAAGIALGNTLEALVAAYLL
                     RRVTGPRPQLDHLQHVRTFVLVAAPLGALCSAIVGSVSLWVTGALPAPAFPAAVGVWW
                     TGDLLGALVVAPVFFTWAVPAQTRDDPRRLLEVLLLCVGTIAAAELGLGRFFDLGALR
                     AVDYPYLLFPFVVWAALRFGARGASRMTLTVSAVAVVHTVQGGSPFVSASAQSTLFQV
                     AGYLLVVAVTGLVLAAAVRWERHQATQALAKSEEQLRRALDAARMGTWFWSVENNRLT
                     GDDNLRQIYGLGPRDRISTYEELLERVHPDDRARVADAVRKVLQDGGELDYEFRVLLP
                     DGRVRWIAEQGEVRRDEHGRPAYMTGVVTDVTERRTAEERLRQAHRMESVGRLAGGVA
                     HEANNQMSVVLGSADFILRRTDVPEAVRADVEFIRKAAERTAAVTAQLLAFSRRQVLK
                     PELLDLNAVVTGWEPVLRRIVGADCGVVLRLAPGLGAVRADPGQLEQVLLNLGLNARD
                     AMPRGGRISIETFQSELTPTYTRARPGTSIQPGQYVVLAVSDTGHGMDKETLSHI"
BASE COUNT          589 a         1149 c         1232 g          624 t
ORIGIN      
        1 cccgaatagg ctatgaaggc ccgcgggtca cgaagctcgc gggcggcttt cagaacgcgg
       61 cgcaccgcaa agctctttcc ccgcagtaac agcttggtca ggttgcgtat ggccggccac
      121 gtcagccgtg cggtcttgtc cacccggcaa tacaacccgg cgaaccgctc atagaacctc
      181 tccggtggca gctttgacgg cagaaccagg tgcatcacgt cgaacagact gtagtcatcc
      241 gtgatcagct catgcttgcg gctttcccag agctccgtgc ccggcagggg cgtgagtatg
      301 gtgaacgtcg ggcaggggat atccgccagc ctcaggaact cctccagccg gtcgaagtcc
      361 tcctcgcccc aagccgggtc ggtgatgagc gacgtcatcg gcgtgatgtg gtggctcttg
      421 aggatctcga tcgcctccag attggtcgca gctcccccct tggtccgctt ccggatcgaa
      481 tccaacccgc tgtcgtccac cttctcgatg ccgaggaaga cggtcttgag cccggcctcc
      541 ttccaaagac cgaagaggtc gcgataccgg acgacgaggt cagcgcgggt ctcgcaggag
      601 tagaggtgct tgagccctgc ctccttgatc cggagcccca actcctcgta ggcgtcgtgc
      661 tggaggaagg cgatgtcgtc ggtgaagaag acccgatcct cccctagggc gcggacctgc
      721 tccagatcct cgacgatgcg ctcgggcgag cggcgccggg cccgccgctg gtagaagacc
      781 cagatgctgc agaagttgca atcgaaggga cagccgcgcg atgtctccac gcaagccgag
      841 ggagtgtcga aggcatggtg gtagcgccgg cgatagcgga gggtgagccg gcggtcgggt
      901 agtggcagat cgtccaggct ggtggagtgg actcgctgct tgtagccgcc gttccggttc
      961 tccagcgtga gcacgccggg gacgctcgcc gggtcgtcat gccgctcgag cgcatcggcc
     1021 aactccagcc cggtccattc tccctcgccg atgacgacgg cgtccaccgg cgagcccggg
     1081 aacaggaagt cgccggggat gagggaggca tggtggccgc cgacgaagac cggggtgccg
     1141 gggatggtct ccttcacggc ccgggcggtc cacagggtgg aatagacgtc ggtggtgaag
     1201 ccgcagctga tgccgacggc atcggggcgg ggagaggtga gggccgaccg cagggccgtg
     1261 gagcggtcca ggcggaggtc gatgagggta acctcgtgtc cgtgcagctt cagcgccgac
     1321 cccaggcact ccaggcccaa gggctcgacc atcaggatgc gggtgaagcc gaaccgagtg
     1381 ccttgcggtg gttgaatcaa cagcagtcgc atgggcggaa tcctccggca atccccgccc
     1441 cggcttccgc gctggtcctc accctgtcgc tcggtgtctt gtccgtggca tcccctcatt
     1501 cgacgggatc cggccggccg tgacaggcgg ggagatcgac aacaacatgg ggaagaggac
     1561 cgattccgac cagccccccg cacacccgcc catcgtgctt ggtgggcctt acgcccgagg
     1621 ccgatgttac gctagcagac taggtgatat tgttcgagcg gaatagccaa tagccaatag
     1681 ccaatagcca atagccaatg gccaatagcc caataaccca tagccatcaa tgagacccag
     1741 ggtcgcgctc ccgcaacccg tgaaatacct cctgacgtcg gcgctgctcg ccattgtgta
     1801 ctatggcgct gcccggctcg gcctccgcta cgcctccatc ggccaaagca tctcgctggt
     1861 ctggccgccc acggggatcg cctttgccgc gctcacctta ttggggtacc ggtactggcc
     1921 cggtgtggcg ctcggcgcct tcctcgctaa cgcttcaacg ccggtcccgc tcctcggggc
     1981 cgccggcatc gctttgggca acacgctcga agctctggtg gcggcgtacc tgctccggcg
     2041 cgttaccggt ccccggccgc agctcgacca cctgcaacac gtgcgcacct tcgtgctggt
     2101 tgcggcgcca ctcggagcgt tgtgtagcgc gattgttgga tcggtgagtc tgtgggtcac
     2161 gggggctctc cccgcacccg cgttccctgc ggccgtcggc gtctggtgga ccggcgatct
     2221 gctcggtgcg ctcgttgtcg caccagtctt cttcacctgg gccgttcccg ctcagacccg
     2281 ggatgacccc cgtcgtctcc tcgaggtatt gctgctttgc gtggggacga tcgccgcggc
     2341 ggagctcgga ctgggccgct tcttcgacct gggcgcgctc cgtgcggtgg actacccgta
     2401 tctgctcttt cccttcgtcg tctgggcggc cttgcgcttc ggcgcgcgcg gcgcgtcgcg
     2461 catgactctc acggtatcgg cggtggcggt ggtgcacacg gttcaggggg gtagcccctt
     2521 cgtgagtgcg agcgcccaga gcacgctctt ccaggtcgcc ggttatctcc tcgtcgtcgc
     2581 ggtaacgggg ctggttctcg cggcggcggt gcggtgggag cgtcatcagg caacccaggc
     2641 cctggcgaag agtgaggagc agctccggcg tgccctggac gcggcacgga tgggaacctg
     2701 gttctggtcg gtcgagaaca ataggctcac cggggatgac aatttgcgcc agatctacgg
     2761 cctgggtccc cgagaccgga tttcgaccta cgaggagttg ctggagcgag tgcatcccga
     2821 tgaccgcgcg cgcgtcgccg acgcggtgcg caaggtcctc caggatggcg gcgagctgga
     2881 ctacgagttt cgggtgctcc tccccgacgg acgagtccgc tggatcgcag agcagggcga
     2941 agtacggcgt gacgaacacg gccgtccagc gtacatgacc ggggtcgtta ccgacgtgac
     3001 cgagcgccgg acggcggagg aacgactgag acaagcgcac cgaatggagt cggtcggacg
     3061 gctggccggc ggggtggcac acgaggccaa caaccagatg agtgtggtgc tgggatcggc
     3121 ggacttcatc ctgagacgga cggacgtgcc ggaagcggtg cgggcagacg tcgagttcat
     3181 ccggaaggcg gccgaacgca cggcggccgt gaccgcgcag ctgttggcct tcagccggcg
     3241 gcaggtcttg aaacccgagc tcctcgacct caatgccgtc gtgaccgggt gggagccggt
     3301 gctccgccga atcgttgggg cggattgcgg ggtggtgcta cggctggcac cgggactggg
     3361 agcggtgagg gccgatcccg gacaactgga gcaggtcctg ctcaacctgg gcctgaatgc
     3421 gcgggacgcc atgccgcggg gaggcagaat ctcgatcgag accttccagt ccgagcttac
     3481 tcccacgtac acgcgagcca ggccgggcac gtcgattcag cccggccagt acgtcgtgct
     3541 cgccgtgagc gacaccggtc acgggatgga caaggagacg ttgagccaca tctt
//
LOCUS       DASYRV010000537         2384 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2406104, whole genome shotgun sequence.
ACCESSION   DASYRV010000537 DASYRV010000000
VERSION     DASYRV010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2384
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2406104"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..696)
                     /locus_tag="VGQ24_14240"
     CDS             complement(<1..696)
                     /locus_tag="VGQ24_14240"
                     /inference="COORDINATES: protein motif:HMM:NF013544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEV8456054.1"
                     /translation="MRQFTGSFNAVCRVGWEKQIGNAFNLHRLTYYACRAAHPTLPPN
                     LHIQARQKAAEAVKSALGRAKQGRKVSCPHSALCPPRYNDRTFRLDWTGSTVSLSTTA
                     GHLVVPFNLPKYAAYAFGLPVATADLIYRDGKFYLHVVVDLAAVEVPENGPVIGVDLG
                     ISRPAVTSDNRFHGKRHWREVVKRTFRLRRALQANGSKSAKRHLRRLAGREKRFRRDC
                     DHVLSKSILRDLPP"
     gene            980..2023
                     /locus_tag="VGQ24_14245"
     CDS             980..2023
                     /locus_tag="VGQ24_14245"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEV8456055.1"
                     /translation="MSVIEVEGLSKAFQVKCRRPGVLGALAALVAAPVETRWAVRDLA
                     FTVEAGEMVGYIGPNGAGKSTTVKMLTGILVPTGGRICVLGLIPAAQRREHAAHIGVV
                     FGQRTQLWWDLPLEESFDLLRAIYRIPADRYRANLKQFRAILELDEFLRTPVRQLSLG
                     QRMRGDLAAALLHDPPVIFLDEPTIGLDVVAKERIREFLRAINREREVTILLTTHDMG
                     DIEKLCSRVMIIDHGRLLYNGPLGEIRERYGRHRVLVVDLQEAQPEEEVRAALASLGD
                     GATGCPCLPVANGGPALIRSERQRHWIRFDRGAVSAADLIAAVSARLPIIDLAIEEPE
                     IEGIIARIYREGL"
     gene            2075..>2384
                     /locus_tag="VGQ24_14250"
     CDS             2075..>2384
                     /locus_tag="VGQ24_14250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456056.1"
                     /translation="MPRAAPNCGWPSCPVPARHTALEERSDDMEAYLGFARRAFQRAI
                     TYRFQFWTELVINILFMYIFVCMWRALYAGREVVAGYDRARLLTYIIVSQTIMTYQFT
                     I"
BASE COUNT          396 a          758 c          807 g          423 t
ORIGIN      
        1 gggtggcaga tcgcggagga tcgacttgga gagtacgtga tcgcagtcgc gccggaaacg
       61 cttctcgcgt cccgcgagac gtcgcaagtg ccgcttggcg gacttggagc cgttcgcctg
      121 cagagcacgc cggaggcgga aggtgcgctt cacgacctcg cgccagtggc gcttgccgtg
      181 gaaacgattg tcggaggtga cggcggggcg ggagatgcct agatcgaccc cgataaccgg
      241 gccgttctcg ggtacctcga cggcggcgag atcgaccacc acgtgcaggt agaactttcc
      301 atcccggtag atcagatcgg ctgtggcaac agggaggccg aacgcatagg cggcatactt
      361 gggcaggttg aaaggaacga ccaggtggcc cgcggtcgtg gagaggctga ccgtggagcc
      421 ggtccaatcc agccgaaagg tgcgatcgtt gtagcgaggc gggcagagag cggagtgggg
      481 gcaggagacc ttcctgccct gcttcgcacg gccaagcgcc gacttgaccg cttcagctgc
      541 cttctggcga gcctgaatat ggaggttcgg cgggagcgtt gggtgcgccg ccctgcaggc
      601 atagtaggtc agccggtgca ggttgaacgc gtttccaatc tgtttctccc agccgacgcg
      661 acagacagca ttgaacgatc cggtgaactg tcgcatcgtc tcatgcaact gtgctgcttg
      721 ctccgacgta ggccgaagcc atattcggat cgttcgtttc aacggtggat ggccgaacct
      781 ctctcgccgc ggtcggcttt acgcacggcg agcgacctgc ttcacagatg tcgctctggt
      841 gaactgacca ggcatccgct ttctcaatag gccagggctc ccaacctaat catactgcaa
      901 ggtcagactt gatgcaacag gcgaacatgg gtacgctttc tttcctagcg gaagcagaag
      961 ccattgcacc ggggaacaca tgtctgtcat cgaggtcgag ggtctctcca aggcgtttca
     1021 ggtgaagtgt cggcgccccg gggtgctggg agccctggcg gcgctcgttg ccgcgccggt
     1081 ggagacccgg tgggcggtcc gcgacctcgc gttcaccgtc gaggccggcg agatggtggg
     1141 ctacatcggc cccaacggcg ccggcaagtc gacgaccgtg aagatgctga cgggtatcct
     1201 cgtgcccacc ggggggcgca tctgcgtcct cgggctcatc cccgcggcgc agcgccggga
     1261 gcacgcggcc catatcggcg tcgtgttcgg ccagcgaacg cagctctggt gggacctgcc
     1321 gctggaagag tcgttcgacc tgctgcgcgc catctaccgc atccccgccg accgctaccg
     1381 cgcgaacctc aagcagttcc gcgcgatcct ggagctggac gagttcctcc gcacgcccgt
     1441 tcggcagctc tcgctcggcc agcggatgcg cggcgacctg gccgccgccc tgctgcacga
     1501 tccgccggtc atctttctgg acgagcccac gatcggcctg gacgtggtcg ccaaggagcg
     1561 aatccgggag ttcctgcgtg ccatcaaccg cgagcgcgag gtcaccatcc tgctcaccac
     1621 ccacgacatg ggggacatcg agaagctctg ctcgcgcgtg atgatcatcg accacggccg
     1681 gctgctctac aacggtcccc tgggtgagat ccgcgagcgc tacgggcgcc accgggtgct
     1741 ggtcgtcgac ctgcaagagg cgcagccgga ggaagaggtc cgggcggcac tcgcttcgct
     1801 cggcgacggg gcgacggggt gtccctgtct ccccgtcgca aatggcggtc ctgctctgat
     1861 ccggtcggag cggcagcgcc actggatccg cttcgatcgg ggcgccgtct cggcggcaga
     1921 tctgatcgcc gccgtctccg cccgcctgcc gatcatcgac ctggcgatcg aggagccaga
     1981 gatcgagggg atcatcgcgc gcatctatcg cgaggggctg tagccggcct gcggccggcg
     2041 tgccacgtgg ggcaccgccg cgaagcggtg gtctatgccg cgtgccgcgc ccaactgtgg
     2101 ctggccgtcc tgccccgtcc ccgcgcggca cacggcactg gaggagcgaa gcgacgacat
     2161 ggaggcttac ctgggattcg cacggcgggc cttccagcgg gcgatcacct atcggttcca
     2221 gttctggacc gagctggtga tcaacatcct cttcatgtat atctttgtct gcatgtggcg
     2281 ggcgctctac gccggaaggg aggtggtggc cggctatgac cgggcgcggc tgctgactta
     2341 catcatcgtc tcccagacga tcatgacgta tcagttcacg attc
//
LOCUS       DASYRV010000538         8046 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2406123, whole genome shotgun sequence.
ACCESSION   DASYRV010000538 DASYRV010000000
VERSION     DASYRV010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8046
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2406123"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..312)
                     /locus_tag="VGQ24_14255"
     CDS             complement(<1..312)
                     /locus_tag="VGQ24_14255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456057.1"
                     /translation="MIRVSSRLAGLLVCGLVLQGCRESAPDGIALVGATLIDGTGGPS
                     LTDAVVIVRRGRIEFVGPRAAFEIPKGTREVDVTGRWIIPGLIDAHSHLAPAAEWAPS
                     RY"
     gene            complement(299..835)
                     /locus_tag="VGQ24_14260"
     CDS             complement(299..835)
                     /locus_tag="VGQ24_14260"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4440 domain-containing protein"
                     /protein_id="HEV8456058.1"
                     /translation="MRRILHRQSDWSTFQHLFHRSSMRAITLLLAAAIAACRTGGETT
                     ASGRNSSVATLTSQITTQLDRAADDWNRGDLERFLADYAAESTTTFVDGRRARHGFEF
                     IRQYYAPRFAPGARRDSLRFEEVEARHLSPGLALVTARYVLTRDGIVTASGPFTLVME
                     QRPAGWRILHDHSSRDPR"
     gene            854..2710
                     /locus_tag="VGQ24_14265"
     CDS             854..2710
                     /locus_tag="VGQ24_14265"
                     /inference="COORDINATES: protein motif:HMM:NF012926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HEV8456059.1"
                     /translation="MTDVQDQTPTEAPARRSGAARHQPISAYGLIGDMRTAALIGLDG
                     SIDWCCLPRFDSASVFAALLDSERGGTWTIHPEGRWTSTQRYLPRTNILETTFRTADD
                     ALISVTDFMPVAEDGGPSGPHPEIHRRLRCTRGRALMSMIFMPRFEYGARTTRLEVLR
                     AGLFATDRTDQVLTLSSGKPFEWMNEQSIAAARFGLEKGEERWLVLRYDDDDIHPVDR
                     YESARKLDNTAAFWQKWSSRVRYRGPYRGMVKRSALVLKLLTHAETGAMIAAPTTSLP
                     ETIGGVRNWDYRFVWLRDAAFTLAALDAVGHYREADQFMRFLKKVCRHEGGGHLQIMY
                     GIDGRRDLVERQLDHLSGYRNSRPVRVGNGAVGQLQLDVYGEVMETADIWRRNHEMTE
                     GTWRVLRGLVDWVSKNWQLPDSSIWEVRGEVRHYVFSKVMTWVALDRGVRMAEELSLE
                     GDTAGWRVARDALHAEIMERGWSEERQSFVQSYDYTALDAAALAIPMVRFLPWNHPRV
                     HATVRAIARELTTMDGELVYRYRHPDGLEGEEGAFSICTFWLAQALAMIGERERAERV
                     FRRMLRHANHVGLYSEEIDPLTGEFLGNFPQAFTHIALINCAAALARLEKQS"
     gene            2748..3113
                     /locus_tag="VGQ24_14270"
     CDS             2748..3113
                     /locus_tag="VGQ24_14270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456060.1"
                     /translation="MAPFREADRRALFLPEDLLREPFRALLRAEPRPPFLADFLALFL
                     ADFLADFFAPFREEDFLAAPRLDFLADLRLGWAGLVRALAGDSSNSYGAGVEAGVGGG
                     VCSIGSGSIQPEPDQPISM"
     gene            3310..5529
                     /locus_tag="VGQ24_14275"
     CDS             3310..5529
                     /locus_tag="VGQ24_14275"
                     /inference="COORDINATES: protein motif:HMM:NF022113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpqB family beta-propeller domain-containing
                     protein"
                     /protein_id="HEV8456061.1"
                     /translation="MISAPLAGARTVCGLRPWTRSYLLTGFALATLIPGAPAAAQTVS
                     EVQVTPETMTLGVGQKQALFATAFDQRGNLIPSAKITYWSSDTLIAQVRKDGTVLGIT
                     PGLAKIEARSQGKRASLAVLITGTARGAPVASVLTLEPATVTLLPGESVRITPQALRE
                     DGAPAVIGRVNWKSLKPEIATVDSAGVVFGVGPGRTIIQAATGSRLMATLPVEVAQAD
                     FVLSRSKIALGPEEADTIRVLVPSQGNREVRTLVQWRSSDSTVASVSASGIVRARGPG
                     QAEIIASGPAQERRAAVSVHPLAEALVVSPHQGVTIPVPLHSTRQFTAVAEAADSSPI
                     LEARVAWHLSDSAVASFDQGTGTLTPKAMGTTTLTATLAGITPAVWTVQVVPGEIAVD
                     PARVGLLVGQRTTLTAHLRDDQGGTASRSAGLRWTSDRSEVALVRDGVVDALSPGHAL
                     VSATAPWGKSATADVYVVGDLLLVSNRGGAYGIYQMRVSGPAGLLPILADNATNIQAV
                     LSPDRTRVAFSSNRATNYDLYLMDADGRNLQRLTSNPGNEGEPAWTPDGKRVIYTATT
                     GATTQIAIISVDGSDNRQLTMGPSRNQSPAVSPDGRTIAFVSTRDGNQEIYTMSLDGS
                     NQRRLTKSSARDSNPRFFRGGDLLYVTERGGKSKGSRVMRGGAAGSAGLLFETDQPIA
                     SLALSRDGDRVAYIVGRLADASKGRVEFSLFLQSTAPGSQPVAVPIRPGEQILNPSF"
     gene            5543..6580
                     /locus_tag="VGQ24_14280"
     CDS             5543..6580
                     /locus_tag="VGQ24_14280"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEV8456062.1"
                     /translation="MKAVTLVAAGGLQHLRVQELPEPVIQSADQVLVRIRAAALNRLD
                     LLVAGGLPGVTYSFPHILGSDGAGVVQAVGSAVRQVSPGDRVMVNPTLSCGQCAACKI
                     GEDSLCARLRVIGEHYPGTAAEYIVVPAQNLAPVPAKMPWPEAASFSLATLTAWRMLT
                     TRARLQRGETVLIWGIGGGVALAALQISGWLGARTVVTSGSDTKLEAARKMGADAVLN
                     HRRADVAAEVRKLTGGQGADVVVDSAGEQSWPVSLRSLRRGGRVVICGATTGPVVSLD
                     LRRLFWHQWTILGATLGSRREYGEILELAHEGKLWPVVDQVVPLDQAQVAFERLQRGE
                     QMGKLVLEVTQ"
     gene            6577..7302
                     /locus_tag="VGQ24_14285"
     CDS             6577..7302
                     /locus_tag="VGQ24_14285"
                     /inference="COORDINATES: protein motif:HMM:NF017373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456063.1"
                     /translation="MNELWERMVIGAGQIGNVIPALVGAAVILLTGYFLARQVQRWAD
                     DLLKRLGFNRMATAGGLDEVVGRTGSRLDPVRALAKLIFWLVMLVVILLASMALGLES
                     INEMFGAMLAFIPTLIAAIVIVILGIIVGEFVRGLIVASAGGVAGVPTVAKIAKAAVI
                     VISIFMALQQVGVAEEIVTAAFTLILGAAALAVGLAFGLGNRELAGEITRRWYEEGQR
                     RDRRRSDSAGPNTPPGDEPPILD"
     gene            complement(7308..>8046)
                     /locus_tag="VGQ24_14290"
     CDS             complement(7308..>8046)
                     /locus_tag="VGQ24_14290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456064.1"
                     /translation="LGVLPIKEVAGSTPVLLYDTVGHGYKTDYQAVLGGGEPGRLIRP
                     DSIPVLRLTVKGGMVDTVGFLAGPEYGDATFGDQVQQAAKVFAPNDFFGVLPDGTAWI
                     ARGRENRVDWRSPDGRWTQGQAHAYTRTPVTQADKDRVLAQVKEHGKQFGMPQDLRIV
                     YPFAETKPPFDFALGRPNGEVWLQRPQSQEGAGRVYDVFNRKGVWERVVAFPQGSALA
                     GFGRGESVYGSVKNEDGTRTVGRFRLK"
BASE COUNT         1370 a         2621 c         2635 g         1420 t
ORIGIN      
        1 atagcgcgag ggggcccact cggctgccgg cgccagatgg ctgtgagcat cgatcaggcc
       61 cggaatgatc catcggcccg tgacatccac ctcgcgggtt cccttgggaa tctcgaaggc
      121 cgctcgaggt ccgacgaact cgatccttcc ccgccgaacg atgaccacgg catcggtgag
      181 cgaagggccg ccggtgccgt cgatgagcgt ggctccgacc agggcgatac catcgggcgc
      241 tgattccctg cacccctgca ggaccagccc gcagacgagc aggcccgcga gccgggaact
      301 aacgcggatc acgggatgaa tggtcgtgaa ggattcgcca accggcgggt ctctgctcca
      361 tgaccagcgt gaatgggccg ctggccgtaa caatgccgtc gcgcgtgagc acgtagcggg
      421 cggtgaccag cgcgaggccc gggctcaagt ggcgagcctc aacctcctcg aaccgaaggc
      481 tgtcccggcg ggctcccggg gcgaagcgtg gagcgtagta ctgtcggatg aactcgaagc
      541 catggcgggc tcgccgccca tccacgaacg tcgtcgtgct ctcggccgca tagtctgcca
      601 ggaaacgttc gaggtcgcca cggttccagt catccgcggc gcgatcgagc tgggtcgtga
      661 tctggctggt cagggtggcg acgctcgagt ttcttcccga ggccgtggtt tcgccgccgg
      721 tccggcacgc cgcgatggcg gcagccagaa ggagcgtgat ggcacgcatg gacgaccggt
      781 ggaaaaggtg ctggaaggtg gaccagtcag actggcgatg caagatccgg cgcactcggc
      841 ttatacttgg gcgatgaccg acgtccagga tcagacgccg accgaagctc ccgctcggcg
      901 ctccggcgcc gctcgccacc aaccgatttc cgcctacggt ctcataggcg acatgcgcac
      961 ggccgccctg atcggtctcg atgggtcgat cgactggtgc tgcctgcctc gcttcgacag
     1021 tgcgagcgtg ttcgcggccc tgctggacag tgaacggggt ggaacctgga ccatccatcc
     1081 cgagggccgg tggacctcca cccagcggta tcttccccgc accaatatcc tcgagaccac
     1141 ttttcgtact gccgatgacg cgctcatcag cgtgaccgac ttcatgccgg tggccgagga
     1201 tggcggtccc tcggggcccc atccggagat ccaccgccgg ctgcgctgca cccgcggccg
     1261 ggccctgatg agcatgatct tcatgccccg gttcgaatac ggagcccgga ccacccgact
     1321 cgaggtgctg cgggcgggac tcttcgccac cgaccggacc gatcaggttc tcacgctctc
     1381 cagcggtaag ccgttcgaat ggatgaacga gcagtcaatc gccgcggctc gcttcggact
     1441 cgagaaagga gaggagcgct ggctcgtcct ccggtacgat gacgacgaca tccatccggt
     1501 ggatcgttac gagagcgcgc gcaagctcga caacaccgcg gctttctggc agaagtggtc
     1561 ttccagggtc cgctaccggg ggccctatcg cggaatggtc aagcgatcgg ccctggtgtt
     1621 gaagctgctc acccatgccg agaccggcgc gatgatcgcc gctccaacca catcgctgcc
     1681 tgagacgatc ggaggcgtgc gcaactggga ttatcgattt gtctggctga gagatgccgc
     1741 cttcaccctg gcggcactcg acgccgtggg gcactatcgc gaggccgatc agttcatgcg
     1801 gttcctcaag aaagtctgcc gtcacgaagg tggcggtcac ctccagatca tgtacggcat
     1861 cgacggccgc cgtgacctgg tcgagcgcca gctcgaccac ctaagcggct atcgcaactc
     1921 ccgtccggtg cgggtcggga atggtgcggt gggccagctc caactcgacg tctacggaga
     1981 ggtcatggag accgcggaca tctggcggcg gaaccacgag atgacggaag gcacctggcg
     2041 agtactccgg gggctggtgg attgggtgag caaaaactgg cagcttccag actcgagtat
     2101 ctgggaggtg cggggcgaag ttcgccatta cgtgttcagc aaggtgatga cctgggtggc
     2161 gcttgaccgg ggcgtgcgaa tggccgagga gctgagcctg gagggcgata ccgccggctg
     2221 gcgggtcgca cgcgacgcgc tccacgcgga gatcatggaa cgcgggtgga gtgaggagcg
     2281 gcagtcgttc gtccagtctt acgactacac tgcgctcgat gccgccgctc tggcgattcc
     2341 gatggtgcgg tttctcccct ggaaccaccc acgggtgcac gcgacagtgc gggcgatagc
     2401 ccgggaacta accaccatgg atggcgagct ggtctaccgc taccgccatc ccgatggact
     2461 cgagggtgaa gaaggcgcct tctccatctg caccttctgg ctggcccagg cgctggccat
     2521 gatcggcgag cgggagcgcg ccgagcgggt cttccgccgc atgctccggc acgcaaatca
     2581 cgtcggcttg tattccgagg agatcgaccc gctgacgggt gagttcctgg gcaactttcc
     2641 ccaggccttc actcacatcg cgctgatcaa ttgtgccgcc gccctcgccc gcctcgagaa
     2701 gcagagctaa ctgagcggtt taccgcctcc ggccaccgcg ccccttcttg gcacccttcc
     2761 gggaagcgga tcgacgcgca ctcttcctgc cggaagactt gctgcgcgag cctttccggg
     2821 cgctcttgcg agccgaaccc cgcccgcctt tcttggcgga tttcctggcg ctcttcttgg
     2881 cggacttttt ggccgatttc tttgcgccct tccgcgaaga ggacttcttg gcagcgccgc
     2941 ggctcgactt cctggccgac ttgcgtctcg gctgggcagg cctggtgcgg gcactggctg
     3001 gtgactcttc gaactcgtat ggagctggcg tcgaggcggg agtggggggc ggcgtgtgct
     3061 ccattggtag cggatccatc cagccagagc cggaccagcc catctccatg tagtgaagct
     3121 cggccatcgt agctccctcc caacgcaggt gcggcgctac ccgccgccgg tttcgaggcg
     3181 cgcacgcgcc ttcagtgaac aggacatata acttgcacat cctcatggct tctgcaagcc
     3241 gccgctgcgg tgtcacccgg gccgcgctat aattacgcac catatcctct tcccggaatc
     3301 aactgcccgg tgatctcagc cccactcgct ggggcccgta cagtctgcgg gcttcggcca
     3361 tggacgcgca gctatctgct cacgggcttc gcacttgcga cgctcatccc cggagctccg
     3421 gcggccgcac agacagtatc cgaggtccaa gtcaccccgg aaaccatgac cctgggggtg
     3481 gggcagaagc aggcgctctt cgccacggcc ttcgatcaac gtggcaacct catcccctcc
     3541 gccaagatta cttactggag ctcggacacc ctcatcgcgc aggtccgaaa ggacggaaca
     3601 gtcttgggca tcacccccgg tctggccaag atcgaagccc ggtcccaggg gaagcgggca
     3661 tcgctggcgg tcctcatcac tggtactgct cgcggagccc ctgtcgcctc ggtcctgacc
     3721 ctcgagcccg ccacggtgac cctcctcccc ggcgagagcg tgcggatcac gccccaggca
     3781 ctccgggagg atggagcccc agcagtgatc ggacgggtga actggaagtc gctcaagccg
     3841 gagatcgcga cggtcgacag cgccggggtg gttttcggcg ttggccccgg cagaacgatc
     3901 atacaggcag ccaccggaag caggctcatg gcgacgctgc cggtggaagt ggcccaggcc
     3961 gactttgttc tctcgcgcag caagattgcg ctgggaccgg aggaagccga caccatccgg
     4021 gtcctggtgc caagtcaagg caaccgtgag gtccgcaccc tggtccagtg gcgatcaagc
     4081 gactcgacag tggcatccgt cagtgcctcg ggcatcgtgc gggcgcgcgg cccgggtcag
     4141 gcggagatca ttgccagtgg tcccgcccag gaacgcaggg ccgcggtgtc ggtacaccct
     4201 ctggcagagg ccctggtcgt ctcaccgcat cagggcgtta cgattccggt cccgctgcac
     4261 tccacccgcc agttcacagc cgttgccgag gccgcggact cgagccccat cctagaggca
     4321 cgagtcgcct ggcatttgag tgactccgcg gtggcctcgt ttgatcaggg aaccggcacc
     4381 ctcactccca aggcgatggg cacgaccacc ttgaccgcaa cgctagccgg aataaccccg
     4441 gcagtatgga ccgtgcaggt ggtgcccggg gagatcgcgg tggaccccgc tcgtgtgggt
     4501 ctcctggtgg gccagcggac gacattgacg gcccatcttc gagacgacca gggcggcaca
     4561 gcaagccgga gcgcaggtct gcgctggacc tccgatcgtt cggaggtcgc ccttgttcgg
     4621 gatggcgtgg tggacgccct gagtccggga catgcgctgg tgagcgccac cgcaccctgg
     4681 gggaagagcg ccaccgccga cgtatacgtg gtcggcgacc tcttgttggt ttccaatcgg
     4741 ggtggcgcct acggtatcta ccagatgcgc gtatccggac ctgccggtct ccttccaatc
     4801 ctggctgaca acgcgaccaa tattcaagcc gtgctctcgc ccgatcgcac gagagtggca
     4861 ttcagctcca atcgtgccac caactacgat ctctacctca tggacgccga tggccggaat
     4921 cttcagcggc tcacctccaa ccccggtaac gaaggggagc cggcctggac tccggacggg
     4981 aaacgcgtca tctacaccgc cacgacgggt gccaccacgc aaatcgccat catctcggta
     5041 gacggcagcg acaaccgcca gctcacgatg gggcccagcc gaaaccaatc gcccgccgta
     5101 tcccctgacg gcaggaccat cgccttcgtc tcgaccaggg atggaaacca ggagatctat
     5161 acgatgagcc tcgacgggag taatcagcgg cgactcacca agagctcggc ccgtgactcg
     5221 aacccgcgat tcttccgcgg cggcgatctg ctctacgtga ccgagcgtgg cggcaaatcg
     5281 aaaggatcac gagtcatgcg cgggggagcg gctggaagtg ccgggctgct cttcgaaacc
     5341 gaccagccca tcgcctcact ggccttgtct cgggacgggg atcgcgtggc ttatatcgtg
     5401 gggcggctcg ccgacgcctc gaagggtcgg gtcgaattca gcctcttctt gcaatctacg
     5461 gcgcccggaa gccagcccgt cgccgttccg atccgcccag gcgagcagat cctgaaccca
     5521 tcgttctgaa gctacgccac gcatgaaggc cgtgaccctg gtggctgccg gagggctgca
     5581 gcacctccgg gtacaggagt tgccggaacc cgtcattcaa tccgctgatc aggtcctggt
     5641 ccggatacgg gccgccgcgc tgaaccgcct cgatctgctc gtcgccggag ggttgccagg
     5701 ggtcacctac agcttccccc atatcctggg ctcggatggg gccggagtag ttcaagcggt
     5761 cgggtccgcg gtccggcagg tcagccccgg agaccgcgtc atggtaaacc cgaccctctc
     5821 ctgcggccag tgtgcggcct gcaagattgg ggaagattcg ctctgtgctc gccttcgggt
     5881 gatcggggag cactatcctg gcaccgcagc cgagtacatc gtcgtcccgg cccagaacct
     5941 ggcacccgtt ccagcgaaga tgccgtggcc ggaggcggcg tccttctcgc tggctacgtt
     6001 gacggcgtgg cgcatgctga ccacgcgggc gcggttgcag cgtggagaga ctgtcctgat
     6061 ctggggcatc ggcggcgggg tcgcgctggc cgcgcttcag atctcgggct ggctcggcgc
     6121 gcggacggtc gtcaccagtg ggtcggacac aaagctcgag gcggcgcgga agatgggtgc
     6181 cgatgcggtg ctcaaccatc ggagggccga cgtcgcggca gaggtgcgga agctcacggg
     6241 agggcagggc gctgacgtcg tggtggacag cgccggggaa cagagctggc cggtgtcgct
     6301 ccggtcgctc agacgtggcg ggcgtgtagt catctgcggc gcgacgactg gaccagtggt
     6361 ctctctcgac ctacgccggc tcttctggca tcagtggacc atactgggcg cgactctcgg
     6421 cagccggcgc gagtacggcg agatcctcga gctggctcac gagggaaagc tgtggcccgt
     6481 cgtcgatcag gtcgtaccgc tcgatcaggc gcaggtggcc ttcgagcggc tccaacgggg
     6541 tgaacagatg ggcaaactcg tcctcgaggt tacacagtga acgagctctg ggaacgcatg
     6601 gtgatcggcg ccgggcagat cggaaacgtg atccccgctc tggtgggagc agccgtcatc
     6661 cttcttacgg gatacttcct ggctcgccag gtgcagcgct gggccgacga cctcctcaag
     6721 cggctgggtt tcaatcgcat ggccacggcc ggagggctgg acgaggtggt gggacgtacg
     6781 gggtcccgtc tcgacccggt gcgcgcgctt gccaagctca tcttctggct ggtcatgctc
     6841 gtggtgattc tcctggccag catggcgctg ggactcgaga gcatcaacga gatgttcggg
     6901 gcgatgctgg ccttcattcc gacgctgatt gcggccatcg tcatcgtcat cctggggatc
     6961 atcgtcggcg agttcgtccg ggggctcatc gtggcctcgg ccggcggcgt tgccggggtg
     7021 cccacggtag ccaagattgc caaagccgcc gtcatcgtga tctcgatctt tatggcgctt
     7081 cagcaggtgg gagtggcgga agagatcgtc accgcggctt ttaccctgat cctgggagcc
     7141 gcggcactgg ctgtgggact ggccttcggc ctgggaaacc gggagcttgc cggcgagatc
     7201 acgcggagat ggtacgagga gggtcagcgg cgggaccggc gccgctccga cagtgccggt
     7261 ccgaatactc cacccggaga cgagccgccg attttggatt agctggacta cttcagccga
     7321 aacctcccca ccgtcctcgt tccatcctcg tttttcaccg atccatagac cgattcgccg
     7381 cgtccaaagc cggcgagcgc cgatccctgg gggaaggcga ccacccgttc ccagacgccc
     7441 tttctattga atacgtcgta gacgcgtccc gcgccttcct gggactgggg ccgctggagc
     7501 cagacctcgc cgttggggcg ccccagggcg aaatcgaacg gcggtttggt ttccgcgaag
     7561 ggatagacga tgcgcaggtc ctggggcatg ccgaattgct tgccatgctc tttgacttgg
     7621 gcgagtaccc gatccttgtc cgcctgggtg accggcgtcc gggtatatgc gtgggcctgt
     7681 ccctgggtcc agcgcccgtc aggcgagcgc caatccaccc ggttttcccg gcccctggca
     7741 atccaggcgg tcccatctgg gagcacgcca aagaaatcgt tgggtgcgaa caccttggcg
     7801 gcctgttgca cctggtcgcc aaaggtggca tcaccgtact caggtccagc cagaaaaccg
     7861 accgtgtcta ccataccgcc cttcacagta agccggagca cggggatgct gtccggccgg
     7921 atgagacgtc ccggctcacc tcccccgagc acggcctggt agtcggtctt gtatccgtgc
     7981 ccaaccgtgt cgtacaataa aacaggtgtg ctgcctgcga cctccttgat cggtagcaca
     8041 ccgagc
//
LOCUS       DASYRV010000539         4016 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2406865, whole genome shotgun sequence.
ACCESSION   DASYRV010000539 DASYRV010000000
VERSION     DASYRV010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4016
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2406865"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1107)
                     /locus_tag="VGQ24_14295"
     CDS             complement(<1..1107)
                     /locus_tag="VGQ24_14295"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEV8456065.1"
                     /translation="MRPIRLLLPAVLWAAQLGAQVPTSRQPADTTAPTDTTETADTTG
                     ALSEAETETPWRTSYLPYLTSDPNDGPVFAFRVHYFQPAEYDDRVTSNAAFTPEAGIT
                     LRGGRHVILRFRAPQLWKNWRLKTLAAAVREVRFGYFGLGNETVENSELVTPSQPFLY
                     RVRRARYGGQVDVTRRIRGPLQVALLGNAEWTRFTSLPLPSVFKSDFGPELRETDFSS
                     RVALVYDTRDKEYNTHQGLLLEAGAQAGTGGSGYTRLYTVLRGYLSPREGTVVAARFV
                     ASGISGSPTLNARFIIPAWEDQIQVLGGQYSHRSFDAGRFAGKGVMFGNFEVRHDLLA
                     FGDLGAITLIGFVDAGRVFEGEKFTTKDLKVGGGG"
     gene            complement(1107..2132)
                     /locus_tag="VGQ24_14300"
     CDS             complement(1107..2132)
                     /locus_tag="VGQ24_14300"
                     /inference="COORDINATES: protein motif:HMM:NF013292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase"
                     /protein_id="HEV8456066.1"
                     /translation="MSHPVSRRTFLGASGLAAAAAAIPALPPAVIRRGAGHPAAVSSG
                     NGLRAVNRAMELVLRGTDTLDAAVEGVKIQELDPADNSVGYGGLPNEDGVVQLDASCM
                     HGPTRRAGAVAALEGIKTPSEVARLVLRYTDHIMLVGEGAKRFALSYGFKEEDLLTPE
                     SRQLWLTWRANRGPDDDWLNVPEDEQMVVRPTGTINLDVVNAQGDISSVTTTSGLAWK
                     IPGRAGDSPIIGAGQYTDNDVGAAGSTGRGEANIMACGGFLTVEGMRRGLKPTDACLE
                     TLKRVVRLTPPRLLKDGRPTFNLNFYAVNKRGDFGAASLYPGKFAAHDGKDGALRDTA
                     YLYQRPA"
     gene            2286..2954
                     /locus_tag="VGQ24_14305"
     CDS             2286..2954
                     /locus_tag="VGQ24_14305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456067.1"
                     /translation="MPDPIVRRTGPAQRWTEEPFSLVRIIVGTIALLGTVLAAVLAIA
                     SRDARMLELVGALWAVYGLVVGFLSGVLEPVIDGFFHLLANAGLMRAGGGYSGIETLA
                     VRGHPQAAAEAYAERARNPAERVEATLRRAALLAGPLTQPETAAVELDGLRSHPLSSR
                     DDFRVGLALVDLYDHHLDDPGRAMAELRRLIDRYPTASGARRLRAALSTLKSQRFDRT
                     QPSS"
     gene            2955..4013
                     /locus_tag="VGQ24_14310"
     CDS             2955..4013
                     /locus_tag="VGQ24_14310"
                     /inference="COORDINATES: protein motif:HMM:NF014769.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456068.1"
                     /translation="MASRPRLDPDIFNLPVAKMRAGYYSDKYFVRAREILLADHYRPR
                     VTMQVFGKAQAFLGGVDEAIAILKLCAIEWPELEVHALHEGDEIEPWETVLLIEGPYD
                     AFAHLETLYLGVLSRRTRVGTNTRRVVEAAAPKEVMFFPARHDHWLVQTGDGYAAHVA
                     GAIGVSTDAQASWWGSQGVGTLPHALIAAYKGDTVLATRKFAERIAPEVRLISLVDFE
                     NDCVRTSVEVARALGDRLYGVRLDTSEMVVDRSLWDQMGTFTPTGVNPQLVWNVRRAL
                     DQAGFPGVRIVVSGGFNVEKIRDFEREGVPVDGYGVGSSLFQGRFDFTADVVLIDGKP
                     CAKVGREYRPNPRLEKVD"
BASE COUNT          670 a         1354 c         1295 g          697 t
ORIGIN      
        1 gccaccgcca ccgaccttca gatccttcgt cgtgaacttc tccccctcga atacccgccc
       61 agcgtccacg aagccgatca gcgtgatggc acccaggtcg ccgaaggcga gcaggtcgtg
      121 gcgaacctcg aaattgccga acatcacgcc cttgccggca aagcgcccgg cgtcgaagga
      181 ccgatgggaa tactggccgc ccaggacctg aatttggtcc tcccaggccg gaatgatgaa
      241 ccgcgcgttc agggtgggac tgccactgat gcccgatgcg acgaaccgcg ccgcgactac
      301 ggttccctca cgtgggctga gatacccccg cagcacggtg tacaaccggg tatagccact
      361 gccaccggtg cccgcttggg cacccgcctc gagcagcagc ccttgatggg tgttgtactc
      421 cttgtccctg gtgtcgtata ccagcgcgac tctactcgag aagtcggtct ccctcaactc
      481 cggtccaaaa tcggatttga agacggacgg cagcggcaga ctggtgaagc gagtccactc
      541 ggcgttgccg aggagcgcga cctgcagcgg cccccgaatt cggcgggtga cgtcaacctg
      601 tcccccgtag cgggcccgcc ggacgcggta gagaaatggc tggctgggcg taaccagctc
      661 gctgttctcg actgtctcat tacccagccc gaagtacccg aaccggacct ctctcactgc
      721 ggcagcaagg gtcttgagcc gccagttctt ccacaattgg ggcgcccgaa atctgaggat
      781 gacgtgacgg ccgccgcgca gcgtgatccc ggcttctggg gtaaacgccg cattactggt
      841 gactcggtcg tcgtactccg ccggttggaa gtagtgtacc cggaaggcaa ataccggtcc
      901 gtcgttgggg tcgctggtca ggtaggggag gtagctggtt ctccagggtg tctcggtctc
      961 ggcctcgctc agcgcgcccg tggtatctgc tgtctccgtg gtgtcggtcg gggccgtggt
     1021 gtcggcgggc tgccggctcg tagggacctg tgcacccagc tgtgccgccc agaggaccgc
     1081 gggcagcagc agcctgatgg ggcgcatcag gcgggcctct gatagagata cgcggtatcg
     1141 cgcagggcgc cgtccttgcc gtcgtgcgcg gcgaacttcc ccggatagag cgacgccgct
     1201 ccgaaatcgc cgcgcttatt caccgcatag aagttcaaat tgaacgtggg tcggccgtcc
     1261 ttgagcaggc gaggcggagt aagccgcacg acccgcttga gggtctcgag gcacgcatca
     1321 gtcggcttga gaccccgcct catgccctcg accgtgagaa aaccgccgca tgccatgatg
     1381 ttcgcttcgc cccggccggt ggacccggcc gcaccgacat cgttatcggt gtactgcccc
     1441 gcgccgatga tcggcgaatc gccggcccgt cccggaatct tccaggccaa cccgctggtg
     1501 gtggtaacgg acgagatgtc tccctgcgcg ttgaccacgt cgagattgat cgtaccggta
     1561 ggccgcacga ccatctgctc gtcctcaggg acgttcagcc agtcgtcatc gggccctcgg
     1621 ttggcccgcc aggtcagcca cagctgccgc gactccggcg tcagcaggtc ttcttccttg
     1681 aaaccgtagg atagcgcgaa gcgctttgcc ccctcgccga ccagcatgat atggtcggtg
     1741 tacctgagca ccagccgagc cacttcgctc ggcgtcttga tgccctcgag ggccgcaacc
     1801 gcaccggccc gccgggtggg gccatgcatg cacgacgcat cgagctggac cacgccgtcc
     1861 tcgttcggaa gcccgccata tcctaccgaa ttgtccgccg gatcaagctc ctgaatcttt
     1921 actccctcca ccgccgcatc gagggtatcg gtgccccgga gcaccagctc catggcccga
     1981 ttgaccgctc ggagcccatt gcccgagctg acggccgcag ggtggccggc gccgcggcgg
     2041 atgacggctg gtggcagcgc aggtatggcc gccgccgctg cggcgagccc gctcgcgccc
     2101 agaaaagtgc ggcgagagac cgggtgtgac atggtgagcc tccccaaacg caaagtgagg
     2161 gccgacggcg ctgccgggga tttaggcccc ggctggagcg aaagtcaacc gatccgggac
     2221 gctcgcttgc tcgcccgctc cgcgcttcct accttttcga cttgagcgcc tcatccatcg
     2281 agaagatgcc cgacccaatc gtccgccgca ccggccccgc ccagcgttgg accgaggagc
     2341 cgttcagcct ggtccgcatt atcgtgggca caattgcact cctgggaacg gtactcgccg
     2401 ctgtcctcgc catcgcctcg cgagacgccc ggatgctcga gctggtcgga gcactctggg
     2461 ccgtctacgg cctggtcgtg ggctttctgt ccggcgtgct cgagccggtc atcgacggct
     2521 ttttccacct cttggcaaac gccgggctga tgcgggcagg cggtggctac tccggcatag
     2581 agacgctggc cgttcgaggg cacccacagg ctgccgccga ggcctacgcc gagcgagccc
     2641 ggaatcccgc cgagcgggtg gaagcgacgc ttcgccgtgc ggcactcctc gccgggcctt
     2701 tgacccagcc ggaaaccgcc gcggtcgagc tcgacggcct ccgctcccac ccgctgtcga
     2761 gccgcgacga cttccgcgtc ggactggcgc tcgtggatct ctacgatcat cacctcgatg
     2821 acccgggccg cgccatggcc gagctgcgcc gcctgattga ccgttatccc accgcgagcg
     2881 gcgcccgccg gctccgcgct gcgctcagca cgctgaagtc ccagcgcttc gacaggaccc
     2941 agcccagctc ctgaatggcc tcacgcccgc ggctcgatcc tgacattttc aacctgccgg
     3001 tcgcaaagat gcgcgccgga tactattccg ataagtactt cgtgcgggcg cgcgagatcc
     3061 tgctggcgga tcactaccgt ccccgggtca ccatgcaggt gttcggcaag gcccaggcgt
     3121 tcctcggtgg cgtggacgaa gccatcgcca tcctgaagct ctgcgcgatt gaatggccgg
     3181 agctcgaggt gcacgcgctc cacgagggag acgagatcga gccgtgggag acggtgctcc
     3241 tgatcgaagg accctatgat gccttcgctc atctcgaaac gctctacctc ggcgtactct
     3301 cccggcgcac ccgggtcggc accaatacca ggcgggtggt cgaggccgcg gcgccgaagg
     3361 aagtcatgtt tttccccgcg cggcacgacc actggctggt acagaccggc gacgggtatg
     3421 ccgcgcatgt cgcgggagcg atcggcgtct cgaccgacgc gcaggcctcc tggtggggca
     3481 gccagggcgt ggggacgctt ccccacgcgc tgatcgccgc ctacaaagga gacacggttc
     3541 tggccacgcg aaagtttgcc gagcgaatcg cacccgaggt caggctcatc agcctggtgg
     3601 acttcgagaa cgattgcgtg cggacctccg tcgaggtcgc ccgggccctg ggcgatcgcc
     3661 tatacggcgt gcggctcgac accagcgaaa tggtggtgga tcgatcgctc tgggaccaga
     3721 tgggcacctt cacgccgacc ggcgtgaatc cccaactggt atggaacgtc cgccgagcct
     3781 tggaccaggc cgggttcccc ggcgtaagga tcgtggtctc cggtggcttt aacgtcgaga
     3841 agatccggga cttcgagcgg gaaggggtgc cggtcgacgg atacggggta ggctcctccc
     3901 tcttccaggg tcggttcgac ttcacggccg acgtggtgct cattgacgga aagccgtgcg
     3961 cgaaggtcgg gcgggagtat cggccgaatc cgagattgga gaaggtagat tagaga
//
LOCUS       DASYRV010000540         5558 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2821683, whole genome shotgun sequence.
ACCESSION   DASYRV010000540 DASYRV010000000
VERSION     DASYRV010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5558
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2821683"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..443
                     /locus_tag="VGQ24_14315"
     CDS             <1..443
                     /locus_tag="VGQ24_14315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456069.1"
                     /translation="DLYIADVGQSEREEIDVAPTAAGGGKGVNYGWSIMEGDQCLGGG
                     QCDQTGLTLPTFQYSHAEGCSVIGGHVYRGSVLPTLQGLYFYGDFCRGWVHSFRYAGG
                     TATEVTDWPALRTSSSLTSFGEDASGELYVLESAGRVSRIVAGP"
     gene            453..1361
                     /locus_tag="VGQ24_14320"
     CDS             453..1361
                     /locus_tag="VGQ24_14320"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEV8456070.1"
                     /translation="MDFESLGARIPPLVRFGTSTWNYPGWRGLVYHRDYGPKGAAAKM
                     LEEYSAFPLFRTVGIDSSFYGPPTEAVLRSYAENLPSGFPCISKVWSQLTIHTFTKAQ
                     DKDKAGKVNPDFLNPDLFIEEIYEPYRRHFAENTGPFVFEFQTIAKSSGIGPEGFASR
                     LDEFFTALPRDAQYAVEVRNDEFLTPMYFAVLREHGVAHVFNSWTRMPPIGHQLDLPG
                     SVAGPFILARALLRPGRTYDEAVDAFAPYDRIREPNPKLRRDLARLVEEAVRLRIPAY
                     LLVNNRAEGSAPLTIAAVAEMLPELR"
     gene            complement(1644..2546)
                     /locus_tag="VGQ24_14325"
     CDS             complement(1644..2546)
                     /locus_tag="VGQ24_14325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456071.1"
                     /translation="MKLTNLRRFNGREWLWRSDQIPLAPPRPGGSYVETADSGGWDEC
                     FPTVSPCPIPGAPPGIPPLPDHGELWSASWTSTVYDSVEGTTLAGSARGTIFPYEFYR
                     EVALDPHEPVVHFRYLLHHTGDAPFSWIWSAHPLLNVQPGSVLTLPDVTHVKVAAAHG
                     REAPSPRSAQALRENDVVSWPGAIGGDADRFTFPSDGGWAAKLFGDIGPAGRLMLTDP
                     RRGERLEFVVRREEVPQVGVWINCRGWAPRGRTPYYNLALEPCIGAPDRLDLAALEWK
                     TAQTLNPGEERRWSVDVRLLQEAD"
     gene            complement(2617..3282)
                     /locus_tag="VGQ24_14330"
     CDS             complement(2617..3282)
                     /locus_tag="VGQ24_14330"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEV8456072.1"
                     /translation="MPLVDLSHTIEHGMTTYPGLPGPLICDYLSREASRSQYAPGVEF
                     QIGRIEMVANTGTYLDSPFHRYAGGKDLSQLPLESLAGLDGVVVRVSSAAGRAISRRS
                     FEEIELEGKAVLVQTGWDVHWRTERYLSGNPFLTRDAAEYLVSRGAVLVGIDSLNIDD
                     IDDPTRPVHSTLLGADIPIVEHMCKLAGLPDRQFRFFAVPAKVAGFGSWPVRAFGHVL
                     PPD"
     gene            complement(3354..4643)
                     /locus_tag="VGQ24_14335"
     CDS             complement(3354..4643)
                     /locus_tag="VGQ24_14335"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEV8456073.1"
                     /translation="MKMLSRTAEMLSRATLNYIDSMENTYFRKGFGLKSEIAGRLNAD
                     YHSAVVEAVRANEYRLDVGGLTFRLAREFGFCYGVDRAVEYAYETRTKFPDRRLFLVG
                     EIIHNPHVNEKLRHMGITLLAHRPDGEFDFGAVTPDDVVIMPAFGVTIGDFQRLRAMG
                     CVLVDTTCGSVLNVWKRVESYARDGYTAIIHGKHYHEETKATASQVMKYPAGRYLVVL
                     DMAEARMICDFIERGEGLALLETRFRQAVSPGFDFARDLTQVGLANQTTMLSGESLAI
                     ADEVRKSMVRRYGPDAVDQHFRSFDTICSATQERQDAVLALIGEPLDVMVVVGGYNSS
                     NTCHLAALVQQHSILTYHIEDADAIDVVSGAIRHQPIGTKSESVTERWLGEARIIGIT
                     AGASTPNNKVGETIARISAVAGVDAELETALETKRER"
     gene            complement(4585..5151)
                     /locus_tag="VGQ24_14340"
     CDS             complement(4585..5151)
                     /locus_tag="VGQ24_14340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456074.1"
                     /translation="MRALAMVLVGLSGCNRAPATPGGAGQIDVRWTGSERGRLSGKAT
                     AEWCSNLRLLEIRAIRGDTGIALAIYPADTITPGTYQVIDPAKAESLPPAAGIALRWA
                     TQIAIKGFQGESGSVVLDRSRSGELSGRVTAAARSVTDTQRVAIDGSFRDLPVRPQTR
                     GCAPPLEHPDEDVEPDGGDAQPSDTQLH"
     gene            complement(5160..>5558)
                     /locus_tag="VGQ24_14345"
     CDS             complement(5160..>5558)
                     /locus_tag="VGQ24_14345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456075.1"
                     /translation="LYGDVRRSFGRRRQITVRGKAGAGTEPALPQTLFRLGGVHTVRG
                     FEYGAVRSPAFWAAQLDLAPVGGRVRPVLFIDAGQGGRIADLLSSRALVGAGLGVSLF
                     HGVVRLDFSHPISPDIGGKVRFDLVFQGGR"
BASE COUNT         1019 a         1815 c         1771 g          953 t
ORIGIN      
        1 gagacttgta tatcgccgac gtgggccaga gtgagcggga ggagatcgac gtcgctccca
       61 cggcggccgg cggcggaaag ggcgtgaact acggctggag catcatggaa ggggaccagt
      121 gcctcggcgg tgggcagtgc gaccagacgg ggctgacctt accgaccttc caatacagcc
      181 acgccgaggg ctgctcagtc attggagggc acgtgtaccg gggcagtgtc cttccgactc
      241 tccaaggtct ctacttctac ggtgactttt gccgtggctg ggtgcacagc tttcgatatg
      301 ccggcggaac cgccaccgag gtgaccgact ggccggcact gcggactagc agctcgctga
      361 ccagtttcgg cgaggatgcc tcgggcgagc tgtacgtgct ggagagcgcg gggcgggtgt
      421 cccggatcgt cgcggggccg taagggggag tcgtggattt cgaatccctc ggagcgcgca
      481 ttccaccgct ggtgcgcttc ggcacttcca cgtggaacta tcccgggtgg cgcggcctgg
      541 tctaccatcg ggactacggg cccaaaggcg cggcggcaaa gatgctggag gagtattcgg
      601 cctttccctt gtttcgcacg gtaggaatcg actccagctt ctatggcccc cccaccgagg
      661 cggtgcttcg gagctacgcc gagaacctcc cgtccggctt cccctgcatc agcaaggtct
      721 ggagccagct gaccatccat accttcacca aggcccaaga caaggacaag gccggaaaag
      781 tcaatccgga ctttctcaat ccggatctct tcatcgaaga gatctacgag ccttaccggc
      841 gccattttgc cgagaacacc gggcccttcg tcttcgagtt tcagaccatc gccaagtcga
      901 gtggcatcgg gccggagggc ttcgcgagcc ggctggatga gttctttacg gctcttcccc
      961 gcgacgctca gtatgctgtc gaggtgagaa acgatgagtt tctcacgccg atgtactttg
     1021 ccgtgctgcg agagcacggg gtggcccacg tgttcaactc atggacccgt atgccgccca
     1081 tcggacacca gctcgacctt cccgggtcgg ttgccggtcc gttcatcctg gcccgcgccc
     1141 tgctccggcc aggacgaacc tacgacgagg cggttgacgc cttcgccccc tatgaccgga
     1201 tccgggagcc caatccgaag ctgcggcgag atctggctcg cctggtggaa gaggccgtaa
     1261 gactgaggat tcccgcctac ctgctggtca acaaccgggc cgaaggaagc gctccgctca
     1321 ccatcgccgc ggtggccgag atgctgccgg aacttcgcta gcgccgtaac cgagctgcgt
     1381 ccccggtaag ggtagccagc agccctggac tgaactccgg aggctgggcg taaggggtgg
     1441 agcgggggga agtcagacgc tcgaagccgg aggagttcgg tccaaggctg ctggctgggg
     1501 tggggtggct gagcttcgac cccgccaacg cagccgtcac gggcatgggc cccctcgaac
     1561 ccatacccgc gacgtctgct ccaccccact cgcacacgat gaggcgggac ggccagcggg
     1621 accgggctga gcctcgaagc tgatcaatcg gcctcctgca gcagccgtac gtctaccgac
     1681 caccgccgct cctcacccgg attgagtgtt tgcgcggtct tccactcgag tgccgccaga
     1741 tcgagacggt cgggtgcgcc gatgcacggc tccagcgcca ggttgtagta cggggtacgc
     1801 ccgcgtggtg cccatccacg gcagttgatc cacactccca cctgcggcac ttcctcgcgt
     1861 cgcaccacaa attcgagcct ctcgccccgc cggggatcgg tcaacatcaa acgaccggcc
     1921 ggcccgatat cgccgaagag cttcgccgcc cagccgccat cgcttggaaa ggtgaatctg
     1981 tcggcatcac cgccgatggc gccgggccaa ctgacgacgt cgttctccct caacgcttgt
     2041 gctgagcgtg gcgaaggagc ctcccgtcca tgcgccgcgg ccaccttgac atgggtgaca
     2101 tccggcagcg tcagcacaga ccccggttgg acattgagca gcgggtgggc ggaccagatc
     2161 caggaaaagg gtgcgtctcc ggtatggtga agcaggtaac ggaagtgcac cacaggctcg
     2221 tgggggtcca gggcgacctc ccggtaaaac tcataaggaa agatcgtgcc tcgggcagag
     2281 cccgcgaggg tggtcccttc gacactgtcg tagaccgtgc tggtccagga cgcgctccac
     2341 agctcgccgt ggtcggggag aggcgggatg cccgggggtg caccggggat cgggcacggg
     2401 ctcacagtcg ggaaacactc gtcccacccg ccactgtccg cggtctcgac gtacgagccg
     2461 cctggtcttg gcggagcaag cgggatctga tcgctccgcc agagccactc ccgaccgttg
     2521 aagcggcgga ggttggtgag cttcattcca atggagggta gcgcgacgag ttcaaccagg
     2581 gctgagcgca gcgcaaccgc gggaaagcct gagacgctag tctggcggaa ggacatgccc
     2641 gaaagcccgc accggccagc taccgaagcc ggcaaccttg gccggcacag cgaaaaaacg
     2701 gaactgccgg tcgggaaggc cggccaactt acacatatgc tcgacaatgg gtatgtcggc
     2761 accgagcaac gtcgaatgca cgggacgggt gggatcgtcg atgtcatcga tgttgagcga
     2821 atcaataccg accagcacgg cgccgcggct caccaggtac tcggctgcat cgcgggtgag
     2881 aaacggattg ccggagaggt accgctcggt acgccagtga acatcccacc ccgtctgcac
     2941 caggaccgcc ttgccttcga gctcaatttc ctcgaatgat cgccgggaga tggctcgtcc
     3001 ggccgcggaa gagacccgca ccacgacgcc atccaggccg gccagggatt cgaggggcag
     3061 ctgggataga tccttgccac cggcgtagcg gtggaatggg gagtcgaggt aggtgccggt
     3121 attggccacc atctcgatcc tgccgatctg gaattcgacc cctggcgcgt actggctgcg
     3181 ggacgcctcc cggctcaggt agtcacagat gagcggtccg ggaaggccgg gataggtggt
     3241 catcccgtgc tcgatcgtat gactcagatc gactagcggc atgcggaaga atcgtaaaca
     3301 gtgaacagta aacagtgaac gggggtgggg ggtgcctgtt taccgttcac tgttcaccgt
     3361 tcacgctttg tttctaacgc agtttccaac tctgcatcca ccccggcgac cgcgctgatc
     3421 cgcgcgatcg tttcacccac cttgttgttc ggcgtcgacg cacccgccgt gatgccgatg
     3481 atccgggcct cgcccagcca gcgctcggtc acggactcgg acttggtgcc gatcggctga
     3541 tggcggatcg cgccgctcac cacatcgatg gcgtcggcat cctcgatgtg ataggtcagt
     3601 atgctgtgct gctgcaccag ggcggcgagg tggcaggtgt tgctcgagtt gtatcccccg
     3661 acaaccacca tcacatcgag tggctcgcca atcagcgcca gcacggcgtc ctgtctctcc
     3721 tgggtggccg aacagatcgt gtcgaacgag cggaagtgct ggtcgaccgc atcgggcccg
     3781 tagcggcgaa ccatgctctt gcggacttcg tcggcgatgg caagcgactc gcccgaaagc
     3841 atggtggtct gattggcgag cccgacttgg gtgaggtccc gggcaaagtc gaagccgggt
     3901 gacaccgcct ggcgaaagcg ggtctccagc agcgcgaggc cctcgcctcg ctcgatgaag
     3961 tcgcagatca tccgggcctc cgccatgtcg agcaccacca ggtaacggcc ggccgggtat
     4021 ttcatcacct ggctcgccgt ggccttggtc tcctcgtggt agtgttttcc gtggatgatg
     4081 gcggtgtagc catctcgggc atagctctcg acccgcttcc agacgttcaa caccgagccg
     4141 caggtggtgt ccaccagtac gcatcccatg gcgcggaggc gctggaaatc cccgatcgtc
     4201 accccaaagg ccggcatgat gaccacatca tccggcgtga ccgccccgaa atcgaactcg
     4261 ccgtcggggc gatgggccag cagcgtgatc cccatatgcc ggagcttctc attgacatgg
     4321 ggattgtgga tgatctcacc gaccaggaag agccgccggt ccggaaactt ggttcgggtc
     4381 tcgtaggcgt actcgaccgc gcgatccaca ccgtagcaga agccaaactc acgcgccaac
     4441 cggaaggtca gtccgcctac atcgagccgg tactcgttgg cccgcaccgc ctcgaccact
     4501 gcactgtggt aatcggcgtt gagccggccc gcgatctcgc tcttgagacc gaaacccttc
     4561 cggaagtaag tgttctccat gctgtcaatg tagttgagtg tcgctcggct gagcatctcc
     4621 gccgtccggc tcaacatctt catcaggatg ctccaaaggc ggggcgcacc ctcgagtctg
     4681 agggcggacc gggagatccc tgaagctgcc gtcgatcgcg acccgctgtg tgtcggtcac
     4741 cgaccgggcg gcagccgtga cccggccgga cagctcgccc gagcgagacc gatcgagcac
     4801 caccgatccg ctctccccct gaaagccttt gatggcaatc tgagttgccc atcgcagggc
     4861 gataccggca gccggcggca gcgactccgc cttggcagga tcgatgacct ggtatgtgcc
     4921 cggggtgatc gtgtcggccg ggtagatcgc gagtgcgatt ccagtgtctc cccggatggc
     4981 gcgaatctcg agcagccgga ggttggagca ccactcggca gtcgccttgc cggacagtct
     5041 gccacgctcg cttcccgtcc agcgcacgtc gatctgtccg gcgccaccgg gggtggccgg
     5101 cgctcggttg caccccgaca agccgacgag gaccatggcc aacgccctca cgctttgctt
     5161 caccgccccc cctgaaaaac gaggtcgaac cgcacctttc cccctatatc cggcgagatg
     5221 ggatggctga aatcgagccg gacgactccg tgaaacagcg atacccctag gccggcaccc
     5281 accaacgccc ggctggacaa cagatctgct atgcggccgc cctgccccgc atcgatgaag
     5341 agcaccgggc gcactcgtcc tccaacagga gccagatcca actgcgcggc ccagaaggcg
     5401 ggcgaccgga ccgccccata ctcgaacccc cgaaccgtat gaaccccgcc gagtcggaag
     5461 agcgtctgcg gcagggcggg ctccgtccct gcgccggcct tccccctgac cgtgatctgc
     5521 cgacgccggc cgaaactgcg gcggacgtcc ccgtacag
//
LOCUS       DASYRV010000541         2439 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2408564, whole genome shotgun sequence.
ACCESSION   DASYRV010000541 DASYRV010000000
VERSION     DASYRV010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2439)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2439)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2439
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2408564"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(152..895)
                     /locus_tag="VGQ24_14350"
     CDS             complement(152..895)
                     /locus_tag="VGQ24_14350"
                     /inference="COORDINATES: protein motif:HMM:NF021385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase"
                     /protein_id="HEV8456076.1"
                     /translation="MTAMTKKNASLSNRWKDRVDGGDWDRITEEVNGYGAALTPQLLT
                     PDETGRIAALYDHDEHFRSTIDMGRHRFGEGEYRYFARPFPEPIEQLKQALYPRLLPI
                     VRDWWNKLGRPAPWPDTLDEWLEMCHAAGQTKSTPILLKYRERDWNALHRDLYGDLVF
                     PLQAVINLSNPGVEHTGGEFLLLEQRPRAQSRGTAMLIPQGHGLVFTTRDRPVESKRG
                     WSAAPVRHGVSAIRSGQRFTLALVFHDAA"
     gene            990..1211
                     /locus_tag="VGQ24_14355"
     CDS             990..1211
                     /locus_tag="VGQ24_14355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456077.1"
                     /translation="MLANWNDLLWPLIVSTDTDMQTLPAGLALFKGQHVTEYGLLMAG
                     AILALLPMIVAFLFVQRRFIEGIATTGIK"
     gene            2119..>2439
                     /locus_tag="VGQ24_14360"
     CDS             2119..>2439
                     /locus_tag="VGQ24_14360"
                     /EC_number="1.-.-.-"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: protein motif:HMM:NF013412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEV8456078.1"
                     /translation="MQGPTFDVLGFLDEPGHPASVATVTGRGRPALAMMWFLVEDDRL
                     WFHTPELSGVPAPFLRAARERREVAVMVATFDPPADVRQVRMTGPARLEEQDFERVRR
                     LYRRY"
BASE COUNT          368 a          839 c          824 g          408 t
ORIGIN      
        1 ctggctgcgc gtgatctggc gctgctggca agaccacacc gcctacgacc ccacccgcca
       61 cggcgcctac cagcgcctca tcacacagga gggttgacac agggctcctc atcggccctc
      121 ctcccgcagt cgggagctcg cggtcatcgc ctcaggccgc gtcatggaac accagcgcca
      181 gggtgaaccg ctgaccggag cggatcgcgg acacgccgtg ccggacaggt gcggcggacc
      241 atccgcgctt ggactccacc ggccggtccc gcgtggtgaa caccaggccg tgtccctgcg
      301 ggatgagcat ggcggtccct cgggactggg ccctggggcg ctgctcgagc agcaggaact
      361 cgccaccggt gtgttcgacg ccggggttgc tcaggttgat cacggcctgc aacgggaaca
      421 cgagatcgcc gtacaggtcg cggtgcagcg cgttccagtc cctctcgcgg tatttcagca
      481 ggatcggcgt ggacttggtc tgcccggccg cgtggcacat ctccagccac tcatccaggg
      541 tgtccggcca cggagcggga cgcccgagct tgttccacca gtcgcggacg atcggcagca
      601 ggcgagggta cagcgcctgc ttcagttgct cgatcggctc cgggaaggga cgcgcgaagt
      661 accggtactc gccctcgccg aagcggtgcc ggcccatgtc gatcgtcgag cggaagtgct
      721 cgtcgtggtc gtagagggcg gcgatccgcc cggtctcgtc cggggtgagc agctgtggcg
      781 tcagcgcggc cccgtacccg ttgacctcct cggtgatgcg atcccaatcg ccgccgtcga
      841 cgcggtcctt ccagcggttc gacaggctgg cgttcttctt cgtcatcgcg gtcatgctgc
      901 ctccaggcgc agaagaaggc ttccggctca cagctactga acgtcctggg ccggccgggt
      961 gtgaggcccg agcagagtct tgacggggga tgctcgccaa ctggaacgac ctgctctggc
     1021 cgctcatcgt ctccacagat accgacatgc agaccctgcc cgccggtctc gcgctgttca
     1081 aaggccagca cgtgaccgag tacggtctgc tgatggccgg cgcgatcctc gcgctgctgc
     1141 cgatgatcgt cgcattcctc ttcgtgcaac ggcggttcat cgaggggatc gccaccaccg
     1201 gaatcaagta ggcaaggatg gcccgagaat cgatgaaatg gtacgagcga cccgagctgc
     1261 ggttcgccgt cggaatcgag gacaccttca tcccccagac ccgcgccggc gaacgcgcgc
     1321 tcgacgagta cgaactgacc cagcactatg actactggca ttccgatctc ggtggtcgtg
     1381 ggcagcctgc tgatctcgct gctccggcac agcgaccggg tcgccgtcgc ctgcctggcg
     1441 caactggtca acgtcatcgg cacctgccga gcctccggca gcatcgccca caggtccagc
     1501 agtggcacct cacggtcagg cggcagcgac gatgccccca aggcgcgcgc cacggcgggc
     1561 aggctcccat cgagacgccc cttgacggcg atcgccggcc agccgtcgcg cgcgcggtct
     1621 cggagtgcgg cgtgccgatg ccatggccgg acagccgcca cggctccgtc gacgccggcc
     1681 gaccccgcgc ttcccggagc ccctcgccgg gcttgcccgt cgctggctcg gtgtccggca
     1741 ggcgcgtggc ggccgcggca atcgcgcatc cgagctgcga cagcccgtag aagagctgga
     1801 caggtcgagt ggcgtacccg gtgacggccg ccgcctccat gaactgctgg ccttgctcga
     1861 gcgctgcggt gaacaccgca tgccgaccgc ggttggtcga tgccattccc ggcgggttgg
     1921 cgcgcatgcc gcgcaggacc ctccatgcat gcgctcgagt catctcaccg aggctgtccc
     1981 acaccatcgc gtcccagttc ccttcttgtt cgcgatcagc ggctcctggg cgaggatgtc
     2041 tcgagcatca gggtgttgac gtataccacg acggccggct tgacctgaat cgtggttgag
     2101 gatgcatgat caatcggcat gcaaggaccg acgttcgatg tgctcggctt tctcgacgag
     2161 ccggggcacc cggccagtgt ggcaacggtg accggccggg gacggcctgc tctggcgatg
     2221 atgtggttcc tggtcgagga cgaccggttg tggttccaca cgccggaact ctcgggcgtg
     2281 cctgcgccgt ttcttcgcgc cgcgcgtgag cggcgtgaag tggcggtgat ggtggcgacg
     2341 ttcgacccgc ccgcggatgt ccgccaggtg cgcatgacgg ggccggcgcg gctcgaggag
     2401 caggacttcg agcgggtgcg ccgcctgtac cggcgctat
//
LOCUS       DASYRV010000542         3785 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3455456, whole genome shotgun sequence.
ACCESSION   DASYRV010000542 DASYRV010000000
VERSION     DASYRV010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3785
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3455456"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(143..502)
                     /locus_tag="VGQ24_14365"
     CDS             complement(143..502)
                     /locus_tag="VGQ24_14365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456079.1"
                     /translation="MRSKEFVSTLSAPVLQNTLRNQRQPSQRSRYEPIAVYYLAEQAK
                     ANGVDLEQAEGPWHASARALSRPGRNSLHNIPVVTNEQTEVMVDTAEHASDVAGLLNW
                     CGVQELEPIPELTPSGV"
     gene            complement(666..3395)
                     /locus_tag="VGQ24_14370"
     CDS             complement(666..3395)
                     /locus_tag="VGQ24_14370"
                     /inference="COORDINATES: protein motif:HMM:NF015644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HEV8456080.1"
                     /translation="MSRRRLVWIVLIAVFAAFFFFPSLVSLLVDWWWFQEIGYQVVFT
                     RELVTRVLLFLVAGGLTFGTLYLNLRTAQRGLVPDPIVFRIGQSAPRVDLTRALLQVS
                     LPVSLFIGVLAGFAATPAWAMVLRFLYGTPFGVEDPVFSRDIGFYVFTLPALSAALGF
                     VSVLAVISLITAVPVYALRGDILLGAGGPRRPPRLRIEPSAGLHLATLLAAVFLVTAL
                     RLWLVDIPNLLYSTTGPLVGASYTDLHARLPALRVSAVVALLAAVVVIIGGTRRRLGR
                     SAVLAIGGYLLVAIVGRSLFPTAMQKLLVAPTELTREMPYLRNHIVATRQAWGLDSVE
                     TRELKGNDTLTLADIRANAATIENVRLWDRDPLLQTFGQLQEIRTYYDFVSVDDDRYW
                     IDGKYRQILLSPRELNVRSLPTRTFINEHLTFTHGMGLTMSPVNQVTSEGLPVLFIKD
                     LPPAPTVSLKVTRPQIYYGELANEYVFTGTRQREFDHPSGEKNVYASYQGRGGVSVGN
                     VLRRAIFATHFGSSKILFSGDITQQSRVLYYRTIMDRARKALPFVIFDRDPYMVLAGD
                     GTLKWILDAYTITDDYPYAQRLQDGTSYMRNSVKLVIDAYDGTLTAYVSAPADPLIRT
                     WARIFPGIFVSGDSMPADLKAHIRYPDGIYRIQTSLYTTYHMDEPDDFYHREDQWQIP
                     VAPESEGAVPFMRHIVMRLPEEKNAEYIYMVPFTPRGKDNLAAWMTARNDGSEYGRLR
                     VYRLSRQSLAYGPRQIVNRINQDTEISRQVSLWDQRGSRVIRGDLLVIPIEESLLYVQ
                     PLYLQAEGGRIPELKRVVVAYQNRVVMQETLEDALAELFGGSSRPRTQPEPAVAAGET
                     PIDSGIRAVAEEARRRYQAALQAQRDLDWAKYGEEMRRLGEVLERLGSQGSKP"
BASE COUNT          693 a         1176 c         1262 g          654 t
ORIGIN      
        1 ggcggggcgg ccagcggact ggactggccc ccagggctga gcgcaagcgg tttggtgggg
       61 ggaagtcggc gcttgaagcc ggaggggtca ggtcagcccg ttggcctgtg gggtggtacc
      121 ctcgcgatga ctgcctcgtg aatcacaccc ccgacggagt gagctccggg atcggctcca
      181 gctcctggac gccgcaccag ttgagcagcc cggcgacgtc ggatgcatgc tccgcggtat
      241 cgaccattac ctccgtctgc tcgttcgtga ccacggggat gttgtggaga ctattccgtc
      301 ccggccggct gagcgcgcgt gcgctggcgt gccaggggcc ctccgcctgc tcaagatcca
      361 ccccgttcgc cttcgcctgt tcggccaggt agtacaccgc gatgggctcg taacgcgacc
      421 gctggctggg ttgccgctga ttccgaaggg tgttctgcag gactggtgca gagagggttg
      481 agacgaattc cttggacctc atcctgcctc ccgcgtaaaa cgcgttttag gccgatctgc
      541 ctatgcggga gcttagggat acggcgaggt agaggcggtg aggcgggtca ctgtacgagc
      601 cggacaggtc gcaagcggcc atagtagccg aagttgggat tcgtaacagt cattgcgagg
      661 gcgtgtcatg gcttcgatcc ctggcttccg agccgttcca gcacctcacc gagccgccgc
      721 atctcctccc catacttcgc ccagtcgagg tcccgctgcg cctggagcgc cgcctggtac
      781 cggcgccgag cttcttcggc gactgctcgg attcctgaat cgatgggtgt ttctcccgca
      841 gccaccgccg gctccggctg agtacgcggc ctgctggacc cgccgaacaa ctcggccaac
      901 gcatcctcca gcgtctcctg catcactacc cggttctgat aggcgactac cacgcgcttg
      961 agctcgggga tccgcccgcc ttccgcctgc aggtagagcg gctgcacgta caagagcgac
     1021 tcctcgatcg ggatcaccag caggtcgccc cgaatgaccc gggagcctcg ctgatcccac
     1081 agcgagacct ggcgggagat ctcggtgtcc tggttgatcc ggttcacaat ctgccgcgga
     1141 ccgtaggcca gactctgccg ggagagccgg tacacccgaa gccgtccgta ctcgctaccg
     1201 tcgtttcgcg ccgtcatcca ggccgccaag ttgtccttcc cccgaggggt gaacggcacc
     1261 atgtagatgt actcggcgtt cttctcctcg ggcagccgca tcacgatgtg ccgcatgaac
     1321 ggcaccgccc cctccgactc gggggcgacc gggatctgcc actggtcttc ccgatgatag
     1381 aaatcgtcag gctcgtccat gtggtacgtg gtgtagaggc tggtctgaat ccggtagatg
     1441 ccgtccggat agcggatgtg ggccttgagg tcggccggca tgctgtcgcc cgaaacgaag
     1501 atgccgggaa agatccgggc ccaggtccgg atcaagggat cggccggcgc gctcacgtag
     1561 gcggtcaggg tgccgtcgta ggcatcgatc accagcttga cgctgttccg catgtagctg
     1621 gtgccgtcct ggagccgctg ggcatacgga tagtcatccg tgatggtgta ggcatcgagg
     1681 atccacttga gggtcccgtc gccggcgagc accatgtaag gatcgcggtc gaagatcacg
     1741 aacggcagcg ccttcctcgc ccggtccatg atggtgcggt agtacagcac ccggctctgc
     1801 tgggtgatgt cgcccgagaa caggatcttc gatgagccga agtgggtcgc gaaaatggct
     1861 cggcgcagca cgttgccgac agatacgcct cccctgccct ggtacgatgc gtagacgttc
     1921 ttctcgcccg agggatggtc gaactcccgc tgccgagtgc cggtgaagac gtactcgttg
     1981 gcgagctcgc cgtaatagat ctggggacgg gtgaccttga gggagacggt cggggccggc
     2041 ggcaggtcct tgatgaacag caccggcaac ccctcggatg tcacctggtt aaccgggctc
     2101 atggtgagcc ccatgccgtg ggtaaaggtc aggtgctcgt tgatgaaggt gcgggtcggc
     2161 agtgagcgga cgttgagctc ccggggcgag agcagtatct gccggtactt cccatcgatc
     2221 cagtagcggt catcgtccac cgagacaaaa tcgtaatagg tgcggatctc ttggagctgg
     2281 ccgaaggtct gcagcagcgg gtcccggtcc cagagtcgga cattttctat agtagcggcg
     2341 ttggcccgga tgtcggccag ggtgagcgtg tcgttgccct tgagctcgcg ggtctccacg
     2401 ctgtcgagcc cccacgcctg acgagtggcg acgatgtgat tgcggaggta gggcatttcc
     2461 cgggtcagct cggtcggcgc caccagtaac ttctgcattg ccgtggggaa gagactgcgg
     2521 ccgacgatcg ccaccagcag gtagccgccg atcgcgagca cggcggagcg gcccaaccgg
     2581 cgccgcgttc ctccgatgat gaccacgacc gcggccagca gcgccacgac cgccgacacc
     2641 cgcagggccg ggagacgggc gtgcaggtcg gtgtagctgg cgccgactag tgggccggtg
     2701 gtggaataga gcaggttggg aatgtccacc agccagagcc ggagcgcggt gacgagaaag
     2761 actgccgcga gcagggtggc gaggtgcagg ccggccgagg gctcgattcg aagccgcgga
     2821 ggccgcctgg gcccgccggc gccaagaagg atgtcgcccc gcaacgcgta gaccggcacc
     2881 gcggtgatga gcgagatgac cgcgagcacg gacacaaagc cgagcgccgc gctgagcgcc
     2941 ggcagggtga agacgtagaa gccgatatca cgggaaaaga ccgggtcctc gacgccgaac
     3001 ggggtcccgt agaggaagcg gagcaccatt gcccaggccg gtgtcgcggc aaagccggcc
     3061 aggacgccga taaacaacga gaccggcagg ctcacctgga gcagcgcccg ggtgagatcc
     3121 accctcggcg ccgattggcc aatccgaaac acgatcggat cggggaccag gccccgctgg
     3181 gcggtccgga gattcaggta gagcgtgccg aacgtgaggc cacccgcgac caggaagagc
     3241 agcacccggg tgaccagctc ccgggtgaag acgacctgat agccgatctc ctggaaccac
     3301 caccaatcga ccaggagcga gacaagggat ggaaagaaga agaacgccgc gaagacggct
     3361 atgaggacga tccacaccag tcggcgtcgg gacatgaagg ctattggcta ttggctttgg
     3421 gctattggct gagctggatg tcgagcagcc atgttctctc ctcatcccga gcccttcgct
     3481 gccgctcagg acaggcgccg cgagggacct aacttacatg ttcccggtgc tcgcatatta
     3541 cgtcccacag cccacaactc atagcccatg gccttcctct caccgcttga gataataggg
     3601 ccgggctggg cttcaggttt acccgctggt gccgcagacg cccccggccc cagttttcat
     3661 cagccaatag ccaatagcca atagcccata gcgagtacac catgaaagtc ggatttatcg
     3721 gccttggcag catggggttg ccgatggcaa ccaatctcat cacggcgggc cacgagctga
     3781 tcgtc
//
LOCUS       DASYRV010000543         2826 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2000924, whole genome shotgun sequence.
ACCESSION   DASYRV010000543 DASYRV010000000
VERSION     DASYRV010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2826
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2000924"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..182
                     /locus_tag="VGQ24_14375"
     CDS             <1..182
                     /locus_tag="VGQ24_14375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456081.1"
                     /translation="LTLPVLQLLAAGFNFCLVVLLGRPLFTLPFRSLEEVLAATPLSM
                     ERKPAARAGVTQAAA"
     gene            179..925
                     /locus_tag="VGQ24_14380"
     CDS             179..925
                     /locus_tag="VGQ24_14380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456082.1"
                     /translation="MMRALRLAAVATLVLGCTPPKDAPPPRSTLVIGLDVSGSFRKGG
                     HFDDAIDFASLYIYAHMKGIAGMRQPSDVFVGTMGGQKTGEAKTFHPIQDLTGKSPAQ
                     IAASLRAWFPEDDPITDYNAFFERVSVHVQRQNLGLAPLSIVMFSDGMPDIPGARGDE
                     LYRRINMTPLEYLSRSVTVRLLYASPKVAQRWEKHVPRKRVRLWTQDADVMEGWRRHV
                     VASVRPEQQDSLWSWMKNVVDFRVRRGKVI"
     gene            1154..2530
                     /gene="mgtE"
                     /locus_tag="VGQ24_14385"
     CDS             1154..2530
                     /gene="mgtE"
                     /locus_tag="VGQ24_14385"
                     /inference="COORDINATES: protein motif:HMM:TIGR00400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEV8456083.1"
                     /translation="MTATPELLYLLAGDAAEFAQVVAGMRSADVAEALRDLPPSAAAR
                     VISALPFDLAVQVLDEPELERRVAMVQAMDVRTAGPLIDGMSSDQRTDLFRELPESER
                     HRLLPALDQRTRRALEFLLKYPPETAGGIMTTEFLTVSPTSTAEETLELIRRVGGGKE
                     TVYVIYVVDAGDGRLRHVVSLRQLIQSEPTCPVTEIGSQRKLLSVSPYTDREDVARLI
                     SKYDLLAIPVVDKDQRILGIVTVDDVIDALIAETTEDVQKFGGMEALDEPYMEMSIPR
                     MLRKRAGWLAALFIGETLTATAMGHFEGEIERAVVLALFVPLIISSGGNSGSQATSLI
                     IRAMALREVRLRDWWRVAIRELPSGLALGAFLGLIGATRILLWQHFGWYDYGSHYGLV
                     TLTVSLALLGVVTFGSLTGSMLPFVLRKLGFDPASASAPFVATLVDVTGLVIYFTVAW
                     LILRGTLL"
     gene            complement(2560..>2826)
                     /locus_tag="VGQ24_14390"
     CDS             complement(2560..>2826)
                     /locus_tag="VGQ24_14390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456084.1"
                     /translation="MPPTQPSPAQRQILVRQVTHVQASWTEQERGDAGAFTLQLILDH
                     GADEYVLRPTAEDTDVLVKLLARSSNATFDVERKVLMFGNLAIE"
BASE COUNT          456 a          890 c          928 g          552 t
ORIGIN      
        1 tgctcaccct gccggtgctc cagctactgg cggccgggtt caacttctgc ctggtggtcc
       61 tgctggggcg gccgctgttt accctgccgt tccgctcgct cgaggaagtc ctcgcggcga
      121 caccgctcag catggagcgg aagccggccg cgcgtgcggg cgtcacccag gcggccgcgt
      181 gatgcgcgcg ctccgattgg cggctgtggc cacgctggtc ctgggatgta ccccgcccaa
      241 ggacgcgccg ccgccgagat ccacgctggt catcggtctg gatgtctccg gctcgttccg
      301 gaagggcggg cacttcgatg acgccatcga tttcgcctcg ctctacatct acgcccacat
      361 gaaggggatc gccgggatgc gtcagccgag cgacgtgttc gtcggtacca tgggcgggca
      421 gaagaccggc gaggccaaga cgtttcaccc gatccaggac ctgaccggca agtcaccggc
      481 ccagatcgcg gccagcctgc gcgcctggtt cccggaagac gacccgatca ccgactacaa
      541 cgccttcttc gagcgggtct ccgtgcatgt gcagcgccaa aacctcggtc tggcgccgct
      601 cagcatcgtg atgttttcgg acggcatgcc cgatattccc ggcgccaggg gtgacgagct
      661 ctatcggcgg atcaacatga cgccgctgga gtacctgtcc cgtagcgtca ccgtgcgcct
      721 gctctacgcc tcgcccaagg tggctcagcg gtgggagaag cacgtcccgc ggaagcgggt
      781 acggctctgg acccaggatg ccgacgtcat ggagggctgg cggcgccatg tggtggcctc
      841 ggtgcggccg gagcagcagg actcgctctg gtcctggatg aagaacgtgg tggacttcag
      901 ggtgagacgc ggcaaggtca tctgacgccc tcgagcaaat ggaagactga cgcgccggcg
      961 atgagccggc gcgtttgctt tgatccaccc tggcccccta ccccatggac aactgcaccg
     1021 gggcggggag ctggcgaggc gggtatgggt ggggttgccc gaaagcactg gtgctgtacg
     1081 gtttgactaa agtttcccaa tgacgagtat tcatgacctc acgagtggcc attcctccga
     1141 atagcagggc tcgatgactg ccacccccga actgctctat ttgctggccg gcgacgcagc
     1201 tgaattcgcg caggtcgtgg ccggcatgcg gtcagccgat gtcgcggagg ccctgcgtga
     1261 cttgcctccg tcggcggcgg ctcgtgttat ctccgcgctc ccctttgacc tcgccgtcca
     1321 ggtgctcgac gagcccgagc tggagcgccg agtcgcgatg gtgcaggcga tggacgtcag
     1381 aacggctggt ccgcttatcg acggcatgtc gtccgatcaa cgaaccgacc tcttccgcga
     1441 gctgcccgag agtgaacggc accgactctt gcctgcactc gatcagcgga cccggcgagc
     1501 actcgaattt cttctgaagt atccgcccga gacggcgggc ggaatcatga cgaccgagtt
     1561 cctcaccgtg tcgcccacct cgactgcgga ggagaccctc gagctcatcc gtcgtgtcgg
     1621 cgggggtaag gagacggttt acgtgatcta cgtggttgat gcgggggacg gccgccttcg
     1681 tcacgttgtc tcgcttcggc agcttattca gagcgagccg acgtgcccag tgaccgagat
     1741 tggcagccag cgtaagctcc tctccgtcag tccttacacc gatcgtgagg acgtggccag
     1801 gttgatctca aagtacgacc tgcttgcgat ccccgtggtt gacaaggacc agcgcatcct
     1861 cggcattgtc acggtggacg atgtgatcga cgcgctaatc gccgagacga cggaggatgt
     1921 gcagaaattc ggtggcatgg aggccttgga cgagccctac atggagatga gcatcccccg
     1981 gatgctccgc aagcgtgccg gttggctcgc cgccctcttc atcggtgaga cgctcaccgc
     2041 caccgccatg gggcacttcg agggtgagat cgagcgcgcc gtggtgctgg cgctcttcgt
     2101 gccgctcatc atcagctcgg gtggtaattc ggggtcgcag gccacgtcgc tgatcatcag
     2161 agccatggcc ttgcgcgagg tacgactgcg ggattggtgg cgggtggcca tccgtgagtt
     2221 gccctcagga ttggctctgg gagcgtttct cgggctgatc ggcgccaccc ggattctcct
     2281 ctggcagcac ttcggctggt acgactatgg ctcgcactac gggctggtaa ccctcaccgt
     2341 ctccctggcg ctcctgggtg tggtcacgtt cggttcgctc acagggtcaa tgcttccgtt
     2401 cgtacttcgc aagctcggtt ttgaccccgc cagcgcctcg gcgccattcg tcgccaccct
     2461 ggtagatgtg acggggctcg tcatctactt cacggtggca tggctcatcc ttcgagggac
     2521 cttgctgtag cccagtgccg cctgcgctgg aagaagagac tactcgatgg cgaggttgcc
     2581 gaacatgagc accttgcgct cgacatcgaa ggtggcgttg gagctccgcg ccagcagctt
     2641 caccagcaca tcggtatcct ccgcggtggg tctcagaacg tactcgtcgg ctccgtgatc
     2701 caggatgagc tgcaaggtga aagcgccggc gtcaccgcgc tcctgttcgg tccacgaggc
     2761 ttggacatgg gtgacctggc gaaccagtat ctgacgctgg gcagggctgg gttgggttgg
     2821 gggcat
//
LOCUS       DASYRV010000544         3507 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2622583, whole genome shotgun sequence.
ACCESSION   DASYRV010000544 DASYRV010000000
VERSION     DASYRV010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3507
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2622583"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..931)
                     /locus_tag="VGQ24_14395"
     CDS             complement(<1..931)
                     /locus_tag="VGQ24_14395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456085.1"
                     /translation="MARGGRSVPSPQIDSVTRRPVRPVLAFPEPGVDDIAAYQGYQTR
                     FYRDSKDNTVQVYIQPEGSRVVLVWADGANESAGFTVRDAAGRPAHLAWGADAADVSD
                     SGAARSIEYRLTTDLSRVELGWFLLGSMRVERDFVYGRRHLQPFAGPPFRVAEESLLV
                     ADVSRLPLEERKRHLALLGAGSVAELRARLEPAITSSTPDSVVTVRVARPSLDGRNRL
                     ALELRVDPRKTRIRVTGRTVSIETRPGSPVHFRVRVTTDASALAPLSREQIFNPAFLK
                     FIDSARTNSSPDAGTRYRRLERQVRGVELLSSQE"
     gene            complement(1195..3396)
                     /locus_tag="VGQ24_14400"
     CDS             complement(1195..3396)
                     /locus_tag="VGQ24_14400"
                     /inference="COORDINATES: protein motif:HMM:NF015592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456086.1"
                     /translation="MIKTRAWLTALCCVEVTLASQLGAQQTRDTSSAAFLLTTDDPNR
                     SPSPFIGNGHLGLVIPALGVGASTSLMAGLYENAPGDVPRIVAVPGWNGIGVFDGKQW
                     IEARASVGRSVSAYRQVLDMKTGAARTSYHWANETRRMSVRVETFVSRAQPGIAGIRL
                     DLAPQYQARLRVRFALAGLPPPRRLALGTLNKAAPDWKPDDIWYAGHMIVRSRSVARL
                     PAGARLSLTSTPEGRMTRLDQVAAVTWDSNLSHATVRTVASGDTALVEVFFNAARGRT
                     YTFTQIVSFVSSAAESRPLARATRQAELARARGYPSLAAESRRVWRRRWETDIELEGD
                     PALQKVVRSMLFYLLCSADSGTQLGIPPMGLSSAGYYGHIFWDSDTWMFPSLVVTHPD
                     VARSLVGFRARTLPAAQANAKANGFRGAMYPWEADERGDETTPHFAVQNARSEIHVNG
                     DVALAQWQYYLATGDSAWLAREGYPVIRETADFWVSRSSYDSTDQRYHIRNVVSVSEG
                     LIGVSDDAYTNAVARKNLETAVAASSRLGTKPSPQWGQVAAKLHMPYDSASEFYRTYE
                     GAPDSTLGDVTPLLAYPLGVPMSDRAKRGNLEPAVRRLMAEGGGAMMGSALLSVDAAE
                     LGDRALVDSLLPHSYQNWLKGPFLMLSETPTNNAVNFLTGAGSFLQQVIYGYTGLRLG
                     EQGLEPAFPPMLPSRITRLTLKNVYSRGKRYDIVVDSTGRRMLPHGTAPLR"
BASE COUNT          604 a         1141 c         1168 g          594 t
ORIGIN      
        1 tctcttgcga gctcagcagc tccaccccgc ggacctggcg ttccaatctg cggtaccggg
       61 tgccggcgtc agggctggaa ttcgtgcggg cactgtcgat gaacttgagg aaggccgggt
      121 tgaagatctg ttctcgggag agtggcgcaa gtgcggaggc atcggtggtg acacgcactc
      181 taaagtggac cgggctgccg ggacgggtct cgatcgagac ggttctcccg gtgaccctga
      241 tccgggtctt ccggggatcc acccgcagct cgagagccag gcggttgcgt ccgtcgagcg
      301 acggccgggc cacccgcaca gtcaccacag agtccggcgt ggacgaagta atggccggct
      361 cgagacgcgc gcgaagctcc gcgacactgc ccgcaccgag aagcgccaga tgacgcttcc
      421 gttcctcgag cgggagccgg ctcacgtcgg ccaccaggag cgactcctcc gctacccgga
      481 atggcggacc ggcaaacggc tggagatggc ggcgtccgta cacgaaatcg cgttcgaccc
      541 gcatggagcc aagcaggaac cagccaagct cgactcggga caggtctgtg gtcagccggt
      601 actcgatgct ccgggctgct cccgaatcgg atacgtccgc agcgtccgcg ccccatgcaa
      661 ggtgagctgg ccggccggca gcatcgcgca ccgtgaagcc ggcgctctcg tttgccccgt
      721 cggcccagac caacacgacg cgagaaccct caggctggat gtagacctgg accgtattgt
      781 ccttggagtc gcggtagaag cgggtttgat agccctggta tgccgctatg tcgtcaacgc
      841 cgggttcggg gaaagcgagt accgggcgta cgggtcgcct ggttacagag tcgatctgag
      901 gactcgggac ggagcgcccg ccgcgcgcca ccgcacttgc tacgctcgcg aagcatctct
      961 ccgggtatgc tggcaagtgc tgacgcgcgc tctggccgct ccgtccctcc gtctcgtcgg
     1021 ttgtaccaat tgtgcttcca aggcggcgat gcgggactgg gcatccggag cgtgcgttag
     1081 cacctgcctc agcaggtgga accgagaccg gcgagagtag caggtgcgga ggcgcgcgga
     1141 ggatgcccgg tcccgcagcc accatcaaca agctgagagc gcttaccccg accatcatcg
     1201 caggggcgcc gtcccgtgcg gcagcatcct tcggccggta gagtcgacga cgatatcgta
     1261 gcgcttccct cgggaataca cgttcttcag cgtgagccgg gtgattcggg acgggagcat
     1321 cggaggaaac gcgggctcca gtccctgctc tcccaggcgg agcccggtgt acccgtagat
     1381 cacctgttgc aggaagctgc cggcgccggt gagaaagttg actgcattgt tggtcggtgt
     1441 ttccgacagc atcaggaagg gtcccttcag ccaattctgg tagctatggg ggagcaggga
     1501 gtcgaccagc gcgcgatccc ccagctccgc cgcatcgacc gagagcaagg cgcttcccat
     1561 cattgcacct ccaccctcag ccatgaggcg cctgaccgcc ggctccaggt tgccccgctt
     1621 ggcgcggtca ctcatgggga ctcctagggg gtaagcaagg agcggagtga catcgcccag
     1681 cgtggagtcc ggcgccccct cgtaggtgcg gtagaactca ctggccgagt catacggcat
     1741 gtgcagcttg gccgcaacct ggccccactg gggactcggc ttcgtgccta ggcggctgct
     1801 tgccgccacg gcggtttcca gattcttacg cgcgacggca ttggtgtagg catcgtcgct
     1861 caccccgatc agcccctccg acaccgagac gacgtttctg atgtggtagc gctggtcggt
     1921 cgaatcgtag gacgaacggc tcacccagaa gtccgcggtc tcccggatta ctgggtagcc
     1981 ttcgcgggct agccacgccg agtcgccggt cgccagataa tattgccact gggcgagcgc
     2041 gacatcgccg ttcacgtgga tctcggagcg ggcgttttgt accgcgaaat ggggcgtggt
     2101 ctcatcgccc cgctcgtcgg cctcccacgg atacatggcc ccccggaagc cgttcgcctt
     2161 ggcattggcc tgcgccgcgg gcagggtgcg cgccctgaat cccaccaatg agcgggcgac
     2221 atcgggatga gttaccacga gcgacgggaa catccaggta tcggagtccc agaagatgtg
     2281 gccgtaatac cccgcgctgg acaggcccat cggcggaatg ccgagttgag tgcccgagtc
     2341 cgcgctgcag aggagataga aaagcatgga gcggaccacc ttctggaggg cagggtcgcc
     2401 ctcgagctcg atgtccgtct cccatctccg gcgccagacc cggcgactct cggccgccag
     2461 gctgggatag cctcgggccc tggccaactc ggcctggcgg gtggcgcgcg ccagcgggcg
     2521 tgactcggct gcggacgaca cgaagctcac gatctgggtg aaggtgtagg ttctcccgcg
     2581 tgccgcattg aagaaaactt ccaccagggc agtatcgccc gacgccactg tacgcaccgt
     2641 tgcgtgcgac aggttgctgt cccaggtaac cgccgccacc tggtccagcc tggtcattcg
     2701 cccttccgga gtcgacgtca gcgacagccg agcaccggcc ggcagccgag ccacactgcg
     2761 agacctcacg atcatgtggc cggcgtacca gatgtcgtcc ggcttccaat ccggcgccgc
     2821 cttgttcagg gtaccgagcg caaggcgtcg tgggggcggc aaccccgcca gggcgaatcg
     2881 cactcgaagg cgcgcctggt actggggggc gaggtcgagg cggatgcccg cgatccctgg
     2941 ctgggctcgc gagacaaacg tctcgacccg caccgacatc cgccgggtct cgttcgccca
     3001 gtgatagctg gtgcgtgctg ctccggtctt catgtcgagc acctgccggt atgcactgac
     3061 cgaacggccg accgaagccc ttgcctcgat ccattgcttg ccatcgaata cgccgatgcc
     3121 gttccagccg gggaccgcca cgatgcgggg gacatcgccg ggggcgttct catacagacc
     3181 cgccatcagg gacgtggagg ccccgacgcc gagtgccggg atcaccaggc cgaggtgtcc
     3241 gttaccgatg aatggggagg gcgagcggtt gggatcgtcg gtcgtgagca gaaacgcggc
     3301 actgctcgtg tcgcgcgtct gctgggcgcc gagttgcgag gcgagcgtca cctcgacgca
     3361 gcagagcgcg gtcagccatg ctcgtgtctt tatcatggaa tcctatagca gaccggcggc
     3421 ggccacagtg gcccgccgcc ggtgctgcaa ttcagtactc gtgacgttaa cgccgttacc
     3481 tgccgcctcc aaagtcatac tcgatcg
//
LOCUS       DASYRV010000545         4268 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_752207, whole genome shotgun sequence.
ACCESSION   DASYRV010000545 DASYRV010000000
VERSION     DASYRV010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4268
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_752207"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1187
                     /locus_tag="VGQ24_14405"
     CDS             <1..1187
                     /locus_tag="VGQ24_14405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456087.1"
                     /translation="ARWIGHASEPSLLESYQEFRRGLDLYADMQSAAATPHFLAAGAR
                     DSGFTLALIFAVWTLNDAGQSGSADSLARLLHAQALPPLDRAIVDYQLMVSAGDLNGE
                     YRTSAALEAVAPRSEWGYLLAESAVKVGRAREAIRVLERIGPDLGWLETSPGYRMLLG
                     RALHFAGEHERELVAMEEARRRFPTNRIIAQMVLKALAALGRVAEVDAEVDRAFALKQ
                     MNGWSDNQPMDQTISELRAHGYPDAARRLAERTVAWIGRQPAADQAAIGTARVELLLD
                     AGRAFEARRLAVQLVAADPEDFELQAFLARVSAEQGDSATARRIDARLTRVSDPRLRA
                     NILVYRAGIAASLGYREVTVGLLQDACRAGFAWRSVLHILPEFAPLRGYPPFDQLARP
                     VD"
     gene            complement(1201..1653)
                     /locus_tag="VGQ24_14410"
     CDS             complement(1201..1653)
                     /locus_tag="VGQ24_14410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456088.1"
                     /translation="MYFDTTAHGLRPATPIPLWKAHRTKDLSVAHGVQCRQDGSELAF
                     LARNDAREVELRVLTVGTGSLRTLYRAPQGRMSAPLAWTDGSRLIAELANSSGTPALW
                     SIGARGEQPARILSGCCRENDVRINRAGRGMGFAAGAQRGESWLLKDY"
     gene            complement(1713..2888)
                     /locus_tag="VGQ24_14415"
     CDS             complement(1713..2888)
                     /locus_tag="VGQ24_14415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456089.1"
                     /translation="MSERHYNDEEVPAILRRRTGAPLRLGVWLLLGGMACREAAISAT
                     PEWPLSENPTLTIGTEGVAEAEFHNVAGAVRLSNGEIAVADGGTNQVRYFAPGGGYLR
                     AFGRPGAGPGEFQSMGSLIRFGDTLAVHDRRTSRLTVFLGDSLLDIRMVRSSNANERF
                     SIDDRLPDGRWVAGTSISPQFSAVPYRDSIAVGILPASGEGVMQWLGWFPGPRIVSIP
                     GKITGLAGFFTWVHSTVAERQVVVLDGDQERLRRFSPDGTESPGASIGIRGEPLTPEI
                     IDQAKHRESNRRNMDPVVARQWLDLKYGSAVLGDRLPAFSTLLADSQGLIWLESYRPD
                     ENQPGRYFILSIDARHVATVAVPAGFRATDIGLDYVLGVVTDADGVERIVMYGLRRN"
     gene            3004..>4268
                     /locus_tag="VGQ24_14420"
     CDS             3004..>4268
                     /locus_tag="VGQ24_14420"
                     /inference="COORDINATES: protein motif:HMM:NF017077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE3 domain-containing protein"
                     /protein_id="HEV8456090.1"
                     /translation="MRTPVKAYGVALAALLVAVFLRWLLDPWVGASLPLATLFGAVAV
                     ASWYGGYRPALLVVIVGYLLSFYLFIEPRGSPDLTDVRNLVGLLMYLITCSILVAFGE
                     ARRVPQLRFEEPVRREEPAAPSAPGSSSTARRRPPAADLIGYGFALTVAVLVGGSALG
                     YRSARVLADGDRQVIHTYEVIGEVEAVLSTLKDAETGQRGYLLTEDLKYLEPYDDAVR
                     RLRSELGRLYLLISNPEQQGRLAALDMKVARRLEELQRSVALMKQGDRRAALEIVGRG
                     TGKALMDAVRTDLAALEQAYTHLLQERETRSRNGYRTTVLFILVPAIIGVWLVAMVYY
                     LSRRQQRAAAQLADQRERLRVTLASIGDAVITTDTGASITFLNPVAESLLGWSRDEAI
                     GEPLDTVFRIVDKTTRVLVPNPTTRVLREG"
BASE COUNT          696 a         1428 c         1398 g          746 t
ORIGIN      
        1 tggcgcgttg gatcggccac gcgagcgagc cgagcttgct cgaatcgtac caggagtttc
       61 gccgggggct cgatctttac gccgatatgc agtccgctgc cgcgacaccg cattttcttg
      121 cggccggggc gagggatagc ggcttcactt tggcactcat cttcgcggtc tggactctca
      181 acgacgccgg gcagtcgggg tccgcggatt cgctggctcg tctgctgcac gcgcaggcgc
      241 tccccccgct cgatcgggca atagtggact accagctgat ggtgtctgcg ggagacctca
      301 atggcgagta ccggacctct gccgcgcttg aagccgtggc gccccggtcg gagtggggtt
      361 acctcctggc cgagagcgcc gtcaaggtgg ggcgcgcgcg ggaagccatc cgggtgctcg
      421 aacggatcgg ccctgacctg gggtggctcg agacctcccc gggttaccgg atgctcctcg
      481 ggcgagcgct tcattttgcc ggtgagcacg aacgggaact cgtcgcgatg gaggaggcgc
      541 gccggcgctt ccccaccaat cggatcatcg ctcaaatggt gctgaaggcc ctggcggcgc
      601 tcgggcgcgt ggcggaggtg gatgccgaag tcgaccgagc attcgccctg aaacagatga
      661 acggctggtc cgataaccag cccatggacc agactatctc ggagcttcgc gcccacggct
      721 atccggacgc ggcccgccgg cttgccgagc gcaccgtggc gtggatcggc cggcagcccg
      781 ctgcggatca ggcggcgata ggtaccgccc gcgtggaact cctgctcgat gccggacggg
      841 cgttcgaagc gcgccggctg gcggtccagc tcgtcgcggc cgatccggag gacttcgagc
      901 tccaggcatt tctcgcccgg gtttctgcgg agcagggcga cagtgccacg gccaggcgga
      961 tcgacgcgcg cctaacccgc gtgtcggatc cgcgtctccg ggcgaatatc cttgtttatc
     1021 gagcagggat cgcggcgagc ttgggctacc gggaggtgac ggtcggtttg cttcaagatg
     1081 cctgtcgggc cggcttcgcc tggcgcagtg tgctccacat cctcccggag ttcgcgccgc
     1141 tgcgaggata cccgccgttc gaccagctgg cccggccggt cgattgaagg accggtagac
     1201 ctaataatcc ttcagcagcc agctctcgcc ccgctgcgca ccagcagcaa accccatccc
     1261 gcgtcccgct ctattgatcc gcacgtcgtt ctcgcggcag cagccggaca gtattctcgc
     1321 cggctgttcc ccacgcgctc cgatggacca gagcgccggg gttccgctgc tgttcgccag
     1381 ctctgcgatg agccgcgatc cgtccgtcca ggcgagcggc gcgctcatgc gaccctgggg
     1441 agctctatat aaggtgcgga gcgatcccgt gcctactgtc aggacgcgaa gctcgacctc
     1501 ccgggcgtcg ttgcgagcca gaaaggccag ctcgctcccg tcctgacggc attgcacgcc
     1561 gtgggccacg ctcaagtcct tggttcggtg ggccttccaa agcggaatcg gcgttgccgg
     1621 tcgtaggccg tgcgcggtcg tgtcgaagta cacgcatcgg aactccgggt tagctgagaa
     1681 aattgctatt gtatcgcgaa cgagacggat cgtcagtttc gcctgagccc gtacatcacg
     1741 atgcgctcga cgccgtcggc gtcggtgacc acaccaagga cgtaatcgag gccgatgtcg
     1801 gtcgccctga agccggccgg caccgcgaca gtggccacgt ggcgggcgtc gatcgagagg
     1861 atgaagtacc gccccggctg gttctcgtcc ggtcgatagc tttccagcca gatcaggccc
     1921 tgcgagtcgg ccagcagagt gctaaacgcc gggagccggt caccgagcac ggcagacccg
     1981 tacttgaggt cgagccactg ccgcgcgacg acgggatcca tatttcggcg attgctctcc
     2041 cgatgcttgg cctggtcgat gatttcggga gtcagcggtt caccccgaat gccgatcgag
     2101 gcgcccggtg actctgtgcc atccggcgaa aaccgccgga ggcgctcctg atcgccgtcg
     2161 agcacgacca cctgccgctc cgcgacagtg gagtggaccc aggtgaagaa ccccgccagt
     2221 ccggtgatct ttcccggaat ggacacgatc cggggacccg gaaaccaccc gagccactgc
     2281 atcacgcctt caccggatgc ggggagaatc cccaccgcga tgctgtcgcg ataggggacc
     2341 gccgagaact gcggggagat cgaagtcccg gccacccagc ggccgtcggg aagccggtcg
     2401 tcgatggaga agcgctcgtt ggcgttgctc gaccggacca tccggatgtc gagcagactg
     2461 tcgcccagga acacggtcag ccggctggtc cggcggtcgt gaacggcgag cgtgtcccca
     2521 aaccggatca ggctgcccat cgactgaaac tcccctggcc cggcacccgg tcgtccgaag
     2581 gctcggaggt agcctcctcc cggcgcgaag tagcggacct ggttcgtccc gccgtccgcc
     2641 actgcgatct ctccgttgct gagacgcacc gcgccggcca cattatggaa ctccgcttcg
     2701 gctacccctt ccgtcccgat cgttagcgtc gggttctcgg aaagcggcca ttcgggcgtc
     2761 gctgaaatcg cggcctcccg gcaggccatg ccgcccagta acagccagac acccaatcgc
     2821 agcggtgctc cggtccggcg tcgcaagatc gcagggacct cttcgtcgtt gtagtgtcgc
     2881 tcactcatag ccgaacatag tcatcgggaa gctgcgcgag tcaacgttcg ttggggtata
     2941 ttcgccgggg ctgccggatt gaccctccgc ccggccagcc agtctcgatt cgagcaacca
     3001 acaatgcgga cgccggtcaa ggcctacgga gtcgcgctgg ccgccctgct ggtggcggtg
     3061 ttcctgcggt ggctgctcga cccgtgggtg ggggcatcgc tccccctcgc cacactattc
     3121 ggcgcggttg ccgtggccag ctggtacggc ggttatcggc cggccctcct cgtcgtcatc
     3181 gtcggctacc tcctcagttt ctacctgttc atcgagccac gtgggagccc ggatctcacc
     3241 gacgtccgca acctcgttgg cttgctcatg tacctcatca cctgctccat cctggtcgcg
     3301 ttcggcgagg cgcggcgggt tccgcagctc cggttcgagg agcccgtccg gcgtgaggaa
     3361 ccggcagcgc cgtcggcacc cggaagcagt tcaactgctc gccgtcggcc tcccgccgct
     3421 gacctcatcg ggtatgggtt cgcattgacc gtggcagtcc tcgtaggcgg cagtgcgctc
     3481 ggctaccgca gcgcccgggt gcttgccgac ggcgatcggc aagtaatcca cacctacgag
     3541 gtgattggtg aagtggaagc cgtcctttcg accctcaaag acgccgagac cggccaacgc
     3601 ggctatctgc tgacggaaga cctgaaatac ctggaaccgt acgatgacgc cgtaaggcgg
     3661 ttgcgaagcg agctgggccg gctgtacctg ctcatcagca atcccgagca gcaaggccgt
     3721 ctcgccgccc tcgacatgaa ggtcgcccgg cgattggagg agctgcagcg cagcgtcgca
     3781 ttgatgaaac agggtgaccg gcgggctgcc ctcgagatcg ttggccgcgg gacgggcaaa
     3841 gccctgatgg acgcggtgcg aacggacctg gccgccttgg aacaggccta cacccatctc
     3901 ttgcaggagc gagagacccg atcccgcaac ggctaccgga ccacggtcct attcatcctg
     3961 gttcccgcca tcatcggggt ctggctggtt gcgatggtct actacctgtc tcggcggcag
     4021 caacgggcgg ccgcccagct ggcggaccag cgggagcggc tccgggtgac gctggccagc
     4081 atcggagacg ccgtcatcac caccgatacc ggggcatcca tcactttcct gaaccccgtc
     4141 gctgagtcct tgttgggctg gagccgggat gaggcgatcg gcgaaccgct cgacaccgta
     4201 ttccgcatcg tggacaagac gacccgggta ctcgtcccga acccgacgac gcgagtgctg
     4261 cgcgaagg
//
LOCUS       DASYRV010000546         5470 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1161201, whole genome shotgun sequence.
ACCESSION   DASYRV010000546 DASYRV010000000
VERSION     DASYRV010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5470
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1161201"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..384
                     /locus_tag="VGQ24_14425"
     CDS             <1..384
                     /locus_tag="VGQ24_14425"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEV8456091.1"
                     /translation="GLTFRHPEYYLFFTGTPNGRNAAREFLARLKERTENRDNTVSIS
                     AFKTQLKAIHAWGRQRPADLSRIHHPVLVANGEHDKMVPSSNSVDLARRLPNAELVLY
                     EDAGHGGLFQYHEAFVKKALEFLEA"
     gene            complement(732..1058)
                     /locus_tag="VGQ24_14430"
     CDS             complement(732..1058)
                     /locus_tag="VGQ24_14430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456092.1"
                     /translation="MRVAAAIGLVLLYACPGTKPIKELLDDPGRFDGETVRIAGEVTQ
                     AAGALGYGAYQVNDGTGTLTVVNETGSGAPRVGAKVGVEGTFRSAFTLGSRSVAVLLE
                     KERKTR"
     gene            complement(1055..1726)
                     /locus_tag="VGQ24_14435"
     CDS             complement(1055..1726)
                     /locus_tag="VGQ24_14435"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEV8456093.1"
                     /translation="MRTVHRFLTVLVGAAGLVGLLSCASKTGTGAAVGAAGGAVVGGA
                     IGAAAGSTVKGAIIGAVVGGAAGAIIGAQMDKQAKELEQNIKGARVQRVGEGIQVTFE
                     SGLLYDFDSDAVRTEAKANLRELAASLEKYPNTDLLIVGHTDQLGSAAYNQSLSERRA
                     RSAATYLVSQGVDGARMVTRGLGETEPVASNETEAGRQANRRVEVAIYASKEFRATAG
                     KPGSP"
     gene            complement(1885..2409)
                     /locus_tag="VGQ24_14440"
     CDS             complement(1885..2409)
                     /locus_tag="VGQ24_14440"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEV8456094.1"
                     /translation="MRRLTAMMVGAVAVLGAGSATAQVRGYVQLGPGLAIPLGDYKDE
                     HKTGWLGQVASGISSGMWGGRVSGSYIRNDFEGTDFHTRILGAMADLVVSPKSGGNVG
                     PYLLGGIGFQNVKANIAADPGSTDFAWNAGAGLTLKTGGFGIFVEGRFLQVRAAGGSL
                     NVIPITAGLRFGGF"
     gene            complement(2606..3136)
                     /locus_tag="VGQ24_14445"
     CDS             complement(2606..3136)
                     /locus_tag="VGQ24_14445"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEV8456095.1"
                     /translation="MKRWTAAMIVGAVAALVSVSPARAQYIFAGGGANIPVSDFKDTH
                     KTGWIVQGGVGVDIGDKGLWVEAEGWYGSNKAKSSCTTCDKVDLWSALGALGYSFSPD
                     KNVSPYILGGAGVLGIKDGETTFGYTGALGVGFKVGSGAQIFLEGRWLAGTGDNKDAK
                     MIPLTVGISYNFSKKM"
     gene            3312..4253
                     /locus_tag="VGQ24_14450"
     CDS             3312..4253
                     /locus_tag="VGQ24_14450"
                     /inference="COORDINATES: protein motif:HMM:NF039905.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEV8456096.1"
                     /translation="MLLNAAAGQGRTDVMEQRIQERCAALGYEARITASKDLSSLILI
                     AQKALEQGVESMVVGGGDGTLSQIAGLLVKAEIPLGVLPLGTFNHFARDLGIPLPLEE
                     ALGVALTGRVERCDVGEVNGRVFLNNSSLGLYPLIVRLRAQHPVRGPAKWAVAAWATL
                     REIRHGREIAVRVNSDAGVVVRRTPIVFIGNNEYRAEGLDLGTRASLHDGILSIYIVK
                     SGGKRHLLRLAWRMLTRRVEDQELEVLLVEEATLETGATRLQLAIDGDVEQLTTPLRY
                     RIRPAALRVRVPPASVPSDDAPPPDRRYRPTTTTPPP"
     gene            complement(4165..5034)
                     /locus_tag="VGQ24_14455"
     CDS             complement(4165..5034)
                     /locus_tag="VGQ24_14455"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEV8456097.1"
                     /translation="MKALLIVLFALAVGVGLLFGWRWLEHNIRRIAGRVARWRERLIA
                     TPPVRKLREHYPVVRRFLAARFARGEYLGLHLTIGFLITLVGLVIFSIITHDVIRQRA
                     ITQLDARLTDFLHSQGTLFGYGFWAVISSLGAGLTLSILGVGVGLLLALRRRWVVLAG
                     WAAAVLGSGLLDGALKFAIRRPRPELAANFLSELSWSFPSGHSMASMVTYGMLAYLVV
                     LAGKGRKRIQIAASVCAVLLILSIGFSRLYLGVHYFSDVVGGFTAGALWLSACISGLE
                     VARRLKGRTPVEP"
     gene            5109..>5470
                     /locus_tag="VGQ24_14460"
     CDS             5109..>5470
                     /locus_tag="VGQ24_14460"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEV8456098.1"
                     /translation="MERILGLHHVTATVNDAQQDLDFYSGLLGLRLVKKTVNFDNHHV
                     FHFYYGDASGTPGTLMTTFPYKGKGVPVGRKGAGQITATGFSVPADSLAGWRKRLAED
                     GRSVTDEGRRFGEEFLTL"
BASE COUNT         1023 a         1796 c         1690 g          961 t
ORIGIN      
        1 gggctgacct tcagacaccc ggaatactat ctcttcttca ccgggacgcc caacggtcgc
       61 aatgcggcgc gcgaattcct ggcacgactg aaagagcgca ccgagaatcg cgacaatacg
      121 gtttcgattt cagcgttcaa gacccaattg aaggccatac acgcctgggg gcgtcagcgt
      181 cctgccgatc tgtcgcgcat tcatcacccg gttctggtgg cgaatggtga gcacgacaaa
      241 atggtgccca gcagcaactc ggtcgacctg gcgcgccgcc ttccgaacgc cgagctcgtc
      301 ctctatgagg atgccgggca tgggggcctc ttccaatacc acgaggcgtt cgtgaaaaag
      361 gctttggagt tccttgaagc atgagccgac acactcttgg cgagctcgcc gcgcgaggct
      421 cggggtcggt ggcgtcgcca tcctgctcgc gatcatgacg agcgtgttcg gcgctgaacg
      481 gcaattccct cccgctcgct tcggcctacc tgaggggcaa cgctggtggc gaacaggggc
      541 cggcaacctc cggcattttg tgtgagccat tccggcccaa gcgggcatct cggagtatta
      601 actccggcag cggacgacag gacctccctt gcttggcgtt gcggggtcga gccccttctg
      661 gcttcgtcgc ctgctggcag tgatagtgca tgcgcctgcc aaacgccggc gcattttgtt
      721 tggggcgccg ctcagcgcgt tttgcgctcc ttctcgagca gcactgctac gctcctgctc
      781 cctagggtga aggccgagcg gaaggtgccc tccactccga ccttcgcgcc cacccggggc
      841 gcgccgctgc cggtttcgtt caccaccgtc agcgtaccgg tcccatcgtt tacctgatac
      901 gcgccgtagc caagcgcccc cgctgcctgg gtcacttcgc cggcgatccg gacggtctct
      961 ccgtcgaagc ggcccgggtc atcgagcagt tccttgatgg gcttggtccc gggacaggca
     1021 tagagcaata ccaggccgat ggcggcggcg actctcatgg agaccccggc tttccagcgg
     1081 tcgcgcgaaa ctccttgctc gcgtagatcg ccacttcgac gcggcgattc gcctgccgcc
     1141 ccgcttcggt ctcgttgctc gcgacgggct cggtctcgcc taacccgcgg gtcaccatcc
     1201 tggccccgtc gacgccctgg ctgacgagat aggtggcggc ggatcgcgcg cgccgctcgg
     1261 acaggctctg gttgtaggcg gccgagccga gctgatcggt atgccccacg atcaggaggt
     1321 cagtattggg atacttctcg aggctcgccg cgagctcgcg cagattcgct ttcgcttccg
     1381 tgcgaacggc atccgagtcg aaatcgtaga gcagtcccga ttcgaaggtc acctggatgc
     1441 cttcgcccac gcgctgcact cgggcgccct tgatgttctg ctctagctcc ttggcttgct
     1501 tatccatctg ggcgccgata atggcgccgg ccgccccgcc gacgaccgcg ccgatgatgg
     1561 ctcccttgac ggtggagccc gccgcggcgc cgatcgcacc ccccacgacg gctccccccg
     1621 cggcacctac cgcagcaccg gttccggtct tcgaagcgca gctcagcagg ccgactagac
     1681 cagcggctcc gaccagcact gtgagaaagc gatgaacggt acgcacgagc ccctcccgga
     1741 tgctgactag ctgtagacga cagaaccgtc gctcggcatc acggccggga gggaatgcgg
     1801 gcaaccgggg ggtaacgaca acgcgccggc ggaaactccg ccggcgcgtt ggcactccga
     1861 tgagctggct ccccgagtgg gcggttagaa cccgccgaac cggagtccgg ccgtaatcgg
     1921 gatcacgttg agcgaaccac cggccgctcg cacctgcagg aatctgccct cgacgaagat
     1981 tccgaacccc cccgtcttca gcgtaagacc ggccccggcg ttccaggcga aatcggtgga
     2041 gcccgggtcc gcggcaatat tcgcttttac attctggaat ccgatcccgc cgagcaggta
     2101 cggtccgacg ttaccgccgc tcttcggcga gacgaccaga tcagccatcg cgcccaggat
     2161 acgggtgtgg aagtcggtgc cctcgaagtc gttgcggatg taggaaccgc tgacccgccc
     2221 gccccacatt cccgagctta ttccgctagc aacctgtccg agccagcccg tcttgtgctc
     2281 atctttgtag tcgccgagcg ggatcgccaa gccgggcccg agctggacat acccccgcac
     2341 ttgggcggtg gcagagcccg cccccagcac tgcgactgcc ccgaccatca ttgcggtcaa
     2401 ccgcctcata actcctcctg acaggaagtg ttagccgtcg tgtctagggg acgtctgttc
     2461 aggctgaata atggcagtcg atcgaaaatc aaccagaatt ggccgaggct gagatttcgc
     2521 cttttatggg caacctacct cccgaaagga cgaagcgccg gcggaaccga ccggcgctct
     2581 gattcaccga cccaagtgag cccagttaca tcttcttgct gaaattgtat gagatgccga
     2641 ctgtgagagg gatcatcttg gcgtccttat tgtcccccgt ccctgccagc cagcggccct
     2701 cgaggaagat ctgtgcaccg ctcccgacct tgaatccgac cccgagcgcc ccggtgtaac
     2761 cgaatgtcgt ctcgccgtcc ttgataccga gtacaccagc tcccccgagg atataggggc
     2821 tcacgttctt gtcgggcgag aaggagtagc cgagtgcccc gagggcggac cagagatcga
     2881 ctttgtcgca cgtggtgcag gacgacttgg ccttattgct gccgtaccag ccctcggctt
     2941 ccacccagag tcccttgtcg ccaatgtcca ccccaactcc gccctgcact atccaacccg
     3001 ttttgtgcgt gtccttgaag tcactgacag ggatgtttgc cccgccaccc gcgaagatgt
     3061 actgggcccg ggctggagac accgagacta gcgccgcgac tgccccgaca atcattgcag
     3121 cggtccacct cttcataact cctcctggag ggaagtgtta gccgtggtgc taagtgacgc
     3181 ctggctcgtc cctgaagtgt ggcagggggc caagaatcgg tcaagagggg aagatgaaga
     3241 gactcggaac cacgaatgaa gcgtatcaga accggacagt cggaggatat tgagccacgc
     3301 ctcccctctc cgtgctcctg aatgcggctg cgggacaagg ccggaccgac gtcatggaac
     3361 agcggattca ggagcgctgc gccgccctgg gctacgaggc acggatcacg gcgagcaagg
     3421 atttgagctc actaatcctt atcgcccaga aggccctcga gcagggcgtc gaaagcatgg
     3481 tcgtcggcgg tggcgacggt acgcttagtc agatcgccgg cttgctggtg aaggcggaga
     3541 ttccgctcgg cgtgctcccg ctgggcactt tcaatcactt tgcccgggat ctcgggattc
     3601 ctctgccgct cgaggaggct ctcggcgtgg cgctcacggg aagggtggag cgctgcgatg
     3661 tcggcgaggt caacggacgg gtctttctca acaactcgag cctcggtctc tatcccttga
     3721 tcgtccggct gcgggcccaa cacccggtgc gcgggccggc gaaatgggcg gtggcggcct
     3781 gggcgacgtt acgggaaatc cgccacgggc gggaaatcgc cgtgcgcgtc aacagcgatg
     3841 ccggcgttgt ggtgcgccgg acaccaatcg tctttatcgg gaacaacgaa taccgtgcgg
     3901 aggggctgga cctgggtacc cgcgcgtcgc tccacgacgg aatcctctcg atctatatcg
     3961 tgaagtcggg gggaaagcgt catctgctcc ggctggcgtg gcggatgcta acccggagag
     4021 tggaggatca agagctggag gtcctcctag tggaggaagc caccctcgaa acaggagcca
     4081 cgcgcttgca actcgcgatc gacggggatg tggaacagct cacgactccg ctcaggtacc
     4141 ggatcagacc ggccgctctc cgggtcaggg ttccaccggc gtccgtccct tcagacgacg
     4201 cgccacctcc agaccggaga tacaggccga caaccacaac gcccccgccg tgaacccccc
     4261 gacaacgtcg ctgaagtaat ggacaccgag gtacaaccgg ctgaatccga tggagagtat
     4321 caggagtacc gcgcagaccg acgccgcgat ttggatccgt ttacggcctt tccccgccag
     4381 caccaccagg taggccagca tgccgtacgt gaccatcgaa gccatcgagt gtccgctggg
     4441 gaagctccag ctcagctcgg acagaaagtt tgccgcgagc tcggggcgcg ggcggcggat
     4501 ggcgaacttg agcgccccat cgagcaagcc gctcccaagc acggcagccg cccaaccggc
     4561 caacaccacc cagcggcgcc ggagcgctag caacaagccg actccaacac ccagaatgct
     4621 gagcgtaagt ccggctccca agctgctgat cacggcccag aaaccgtacc cgaataaggt
     4681 tccctgggaa tgcaggaagt cggtgagccg cgcgtcgagc tgggtaatgg cacgctggcg
     4741 gatcacgtcg tgagtaataa tgctgaagat gaccagcccc acgagcgtga tcaggaagcc
     4801 gatggtcaga tggagaccga gatactctcc gcgggcaaag cgagccgcca gaaaacggcg
     4861 gaccacggga taatgctccc gcagcttccg aacgggagga gtcgcgatca gccgctcgcg
     4921 ccaccgtgcg acccggcccg caatcctgcg gatgttgtgc tccagccagc gccagccgaa
     4981 caacaggccg acgcccacgg ccagcgcgaa cagcacgatc agcagcgcct tcattccggc
     5041 aggctcctca cggctttggc actggcggga atctgctagc ttgaggctgg aatttcatgg
     5101 agcctctcat ggaacgcatt ctgggcctgc accacgtgac cgccacagtg aatgacgccc
     5161 agcaggacct cgatttttac agcggcctgc tcgggctccg gctggtcaag aagaccgtga
     5221 atttcgacaa tcaccacgtg tttcacttct actatggtga cgccagcggc acgcccggca
     5281 ccctcatgac gactttccca tacaagggga agggtgtgcc ggtggggcgc aagggcgccg
     5341 ggcagattac cgccacgggg ttctcggtgc cggcagactc gctcgccggg tggcgcaagc
     5401 gtctggccga ggacggccgt tcggtcacgg acgaaggccg ccgctttggg gaggaattcc
     5461 tgacgctgga
//
LOCUS       DASYRV010000547         5639 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3862066, whole genome shotgun sequence.
ACCESSION   DASYRV010000547 DASYRV010000000
VERSION     DASYRV010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5639
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3862066"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..400)
                     /gene="ccsA"
                     /locus_tag="VGQ24_14465"
     CDS             complement(<1..400)
                     /gene="ccsA"
                     /locus_tag="VGQ24_14465"
                     /inference="COORDINATES: protein motif:HMM:NF013725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HEV8456099.1"
                     /translation="MNGSEGTLGPARRIVRRGLALSLLGLVGLAGVYVLALGFTPTEA
                     RQGLAQKIFYLHVPAAWSALLAFSLVGLASVLYLWLHDPRLDRFAAASASAGVAFSAV
                     MLTTGPIWAKPIWGTWWTWDARLTLTLFLFF"
     gene            complement(397..1077)
                     /locus_tag="VGQ24_14470"
     CDS             complement(397..1077)
                     /locus_tag="VGQ24_14470"
                     /inference="COORDINATES: protein motif:HMM:NF015344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HEV8456100.1"
                     /translation="MPDAIRFALAIAGKDIRAELRSKTALLSALVFAALVLVVFNFAR
                     DPTVLAASDLAPSVLWVTFALAAIVALNRAFNIERENAALDGLLLAPVSREALFLGKL
                     LANLAFVGTVELVTLPLFMLFFNVSLGRALPGVLAVTALATIGFVAVGTIFSAMAVRT
                     RFAELMLPVLLLPFMVPPLIGAVQVTSRLLAARPLSEMWGWLRLLALYDIVFVTLCVL
                     TFSAVVDE"
     gene            complement(1070..1789)
                     /gene="ccmA"
                     /locus_tag="VGQ24_14475"
     CDS             complement(1070..1789)
                     /gene="ccmA"
                     /locus_tag="VGQ24_14475"
                     /EC_number="7.6.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR01189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015439 - ABC-type heme transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC exporter ATP-binding protein CcmA"
                     /protein_id="HEV8456101.1"
                     /translation="MPSHDGAFLLEARGLQRSFGRVRVLHGIDLSLGPGEALAVIGPN
                     GAGKTTLLRLLAGLMRPTAGEVRLLGQPLGRGTHHARRAVGFLSHQSLLYDDLTLLEN
                     LTLAARLYLLKRPVEVARAALDAAGLANRAGELPRRLSRGLLQRAAIARSTLHDPRVL
                     LLDEPFTSLDAMASSRLQDDLQARLSQGLGLVLVTHNLSDAWQLASRVAVLIQGRWEA
                     HEPRSGTLEDFLPRYQRLAGA"
     gene            complement(1776..2144)
                     /locus_tag="VGQ24_14480"
     CDS             complement(1776..2144)
                     /locus_tag="VGQ24_14480"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8456102.1"
                     /translation="MSKGKRRRRVLIVEDEPALRLSYERAFNPRYDLVFASTGAEALE
                     QLKQHKPDVAVLDMRLPDTDGVDLLRRIRLTQPELPVIITTAYMSIEPQLKVLDLPHS
                     GYIVKPFRLDELGARIDAVS"
     gene            complement(2354..2668)
                     /locus_tag="VGQ24_14485"
     CDS             complement(2354..2668)
                     /locus_tag="VGQ24_14485"
                     /inference="COORDINATES: protein motif:HMM:NF024857.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEV8456103.1"
                     /translation="MRTTHDAERGLVAPETLGLDTRVEIRKAAIRLLEEMPEGVGRLV
                     IDLGRTRHVDSAGLGALMLIQRRAAERRQQVVLRNPSDEIRFLLVLTKLDDLFLIESA
                     AA"
     regulatory      complement(2678..2771)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01051"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class I; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01051"
     gene            3007..4947
                     /gene="acs"
                     /locus_tag="VGQ24_14490"
     CDS             3007..4947
                     /gene="acs"
                     /locus_tag="VGQ24_14490"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HEV8456104.1"
                     /translation="MNDQLETLLSEQRRFPPPPAFAARAAATEALYAAARDAERFWEE
                     QARALDWMSPWRQVLDWKPPHARWFVDGKLNVSANCLDRHLGGPRRNKAAIVWEGEPG
                     DRRVLTYWDLAREVRRCANALKGLGIKRGDRVAIYLPMVPEAAIAMLACARIGAVHSV
                     VFGGFSAESLQDRINDAQAVALITADGGYRRGQVLPLKRFADEALAHCPSIKHCIVVQ
                     RLGDEAFPSIQEGRDHWWHRLLQAASTDCKPEPMDAEDMLFILYTSGTTGKPKGIVHT
                     TGGYLTQVASTTKYVFDLREEDVFWCTADIGWVTGHSYVVYGPLANGATVVMYEGAPD
                     WPERDRFWRLVETYGVTVLYTAPTAIRAFMKWGAEHADKHDLSTLRLLGTVGEPINPE
                     AWIWYHENIGGKRCPIVDTWWQTETGGIMITPLPGVTTTIPGSATVPFPGVSAELVDS
                     TGKRLEKGGGFLTLTQPWPGMLRTIYGDDERYQETYWSRFPGRYFAGDGAKLDEAGYW
                     WILGRVDDVLNVAGHRIGTMEVESALVDHPAVAEAAVVGRAHDLKGQALAAFVTLKEG
                     RQATPALKDDLKDHVVKKIGAIARPDDILFSADLPKTRSGKIMRRLLKDIAEGRTLGD
                     TTTLADPAVVNRLKEMYEDKES"
     gene            complement(4967..>5639)
                     /locus_tag="VGQ24_14495"
     CDS             complement(4967..>5639)
                     /locus_tag="VGQ24_14495"
                     /inference="COORDINATES: protein motif:HMM:NF014731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HEV8456105.1"
                     /translation="VTGLFLTIDLAFWAANIVKIFHGGWFPLVVAAVLFGIMTTWKRG
                     RLILRERLEKVVLPADLFLHDVRGNSTMRVPGTAVFMYSDPAATPPALLHNLKHNKVL
                     HERVVFLVVETENVPHVPPEERAKLEDLGVGFYRVTLRYGFMEEPNVPQALAALREKG
                     LALKPLETTYFLGRETLIPTNKPGMALWRERLFTVMHRNARTATSFFCLPPNRVVELG
                     AQIEL"
BASE COUNT         1079 a         1802 c         1852 g          906 t
ORIGIN      
        1 gaaagaagag gaatagcgtc agggtgagcc tggcatccca ggtccaccag gtgccccaga
       61 tcggcttggc ccagatcgga ccggtcgtca acatgacggc actgaacgcc acgccggcgc
      121 tggccgaggc ggcggcgaac cggtcgagcc gaggatcgtg gagccagagg tacaggacgc
      181 tcgcgagccc cacgagggag aaggccagga gcgcgctcca cgctgcgggc acgtggagat
      241 agaagatctt ctgagccagt ccctgtcgcg cctccgtcgg ggtgaaaccg agcgccagca
      301 catatacccc ggccagcccg accaatccca ggagactcag cgcgagcccg cggcgtacga
      361 tgcgccgggc cggcccgagc gtcccctcgg acccattcat tcgtccacca ccgcggaaaa
      421 ggtgagcacg cagagggtca cgaagacgat gtcatagagg gcgagtaacc taagccaacc
      481 ccacatctca ctcaatggac gcgctgccaa caagcgggag gtgacctgca cggcgccgat
      541 gagcggcggc accatgaagg gcaggagcag caccggcagc atcaactcgg caaacctggt
      601 gcgcaccgcc atcgcgctga agatcgtgcc caccgccacg aagccgatcg tggccaacgc
      661 cgtcacggcg aggacccccg gcaacgctcg tccgagactc acgttgaaaa acagcatgaa
      721 cagcggcaaa gtgaccagct cgaccgttcc gacgaaagcc agattggcga gcagcttgcc
      781 gagaaagagc gcctctcgag ataccggcgc gagcagcagg ccgtccagcg ccgcattctc
      841 ccgctcgatg ttgaacgccc ggttgagtgc cactatcgcg gccagcgcga acgttaccca
      901 cagcacactg ggggccagat cggacgcggc cagcacggtc gggtcgcggg caaagttgaa
      961 caccaccagc accagtgccg caaagacgag cgcggagagc aatgccgttt tactccggag
     1021 ctcggcccgg atgtccttgc ctgcgatggc gagggcaaaa cggatggcgt caggcaccgg
     1081 cgagcctctg atagcgaggc agaaagtcct ccagtgtccc cgaccgtggc tcatgtgcct
     1141 cccatcgacc ctggatcagc accgccacac gggacgccag ctgccacgca tcggacagat
     1201 tgtgggtgac cagcaccagc cccaggccct gggatagacg cgcctgaagg tcgtcctgga
     1261 gccgactcga cgccatggca tcgaggctgg taaatggctc gtccaggagc agcactcggg
     1321 gatcgtgcag tgtgctgcgg gcgatggcgg cccgctggag gagaccgcgg ctgagccgcc
     1381 tggggagctc tccggcccgg ttggccagac cagcagcgtc cagcgccgcc cgcgcgacct
     1441 cgaccggccg cttgagcagg tagagccgcg ccgccagcgt gaggttctcc agcagagtca
     1501 ggtcgtcgta gagcagggac tgatgggaga ggaatccaac ggcgcggcgg gcgtggtggg
     1561 tgccccggcc gagcggctga cctagcagcc ggacctcccc tgcagtcggc cgcatcaggc
     1621 cggccagcag ccgcagaagt gtcgtcttgc cggccccgtt ggggccgatg accgccaggg
     1681 cctcacccgg cccgagcgac aggtctatgc cgtggagaac gcggactcgc ccgaagctgc
     1741 gttggagtcc gcgagcttcg agcaggaatg cgccgtcatg agacggcatc gatccgcgcg
     1801 ccgagctcgt cgaggcggaa tggtttgacg atgtagccgg aatgaggaag atcgaggacc
     1861 ttgagctggg gctcaatgct catgtacgcg gtggtaatga tgacgggaag ctcgggctga
     1921 gtcagccgga tgcgtcgcag aaggtcgacc ccatcggtat ccggcagccg catgtccagg
     1981 acggccacgt caggcttgtg ctgcttgagc tgttccagtg cttcggcgcc ggtagaggca
     2041 aagaccagat cgtaccgtgg gttgaaggct cgttcataac tcaaccgaag cgccggctcg
     2101 tcctcgacga tcaagacgcg ccggcgacgc tttcccttgc tcattgccaa gactccgcgg
     2161 ccagtactcc cggagggaca ggaggaacct gcgctcgggg gtactctaac caattggagg
     2221 ggagtcgtcc acccgaatcg gccccgtagg cggcctcatg gaaagtcggt aaggtggtaa
     2281 aagtcggtaa ggtggtagat gaagcggtgg tagatgcttg ggagggagag gacggtaggc
     2341 taccgccccc ccatcaggcg gcggccgact cgatcaggaa gagatcgtcg agcttggtga
     2401 gcaccagcag gaagcggatc tcgtcactgg ggttccgaag gacgacctgc tggcgtcgct
     2461 ctgccgcacg gcgctggatc aacatgagcg ctccgaggcc ggcagagtct acgtggcggg
     2521 tgcgcccgag atcgatcacc aggcgtccca cgccttcggg catctcctcg agcagcctga
     2581 tggcggcctt ccggatctcg accctggtat cgaggccgag tgtttccggt gcgaccagtc
     2641 cgcgctctgc gtcgtgcgtg gtcctcatct ctcctccttc ggcaccgagc tatctcgacc
     2701 ctggtacatt cgaccaggcg agacctctag ttttgcggcc ccgaatcact ccgggtgtgc
     2761 tcttatcggg cggattcgcg ctcgaccaca gactccgcgg tcttgcacgg gaaaaagcga
     2821 gactggtgcc acttacgaca agcttcggat tcgcaatctt ttgcgaggcc tttaccaact
     2881 cttgcagtac ccgcgcccac cgcactccgc ggcagaccac tgcaaaagta gcgggtacgc
     2941 gcggcctcgc tcttacaacg accccgtggg gcctttagct ttgccctgtc tctcaccccg
     3001 atggcgatga acgaccaact cgaaactctc ctctccgagc agcgccgctt tcctcccccg
     3061 cctgcattcg ccgctcgtgc ggcggccacc gaggctctct atgctgcggc acgtgatgcg
     3121 gagcggttct gggaggagca ggcccgcgcg ctcgactgga tgtcaccctg gcgccaggtg
     3181 ctcgactgga agccaccgca cgcacgctgg tttgtcgacg gcaagctgaa cgtgtcggcc
     3241 aattgtctcg accggcatct gggggggccg cgtcgtaaca aggcggcgat cgtgtgggaa
     3301 ggcgagccgg gggatcggcg ggtcctgacc tattgggatc tcgcacgcga ggttcgccgc
     3361 tgcgccaacg cgctcaaggg gctcggtatc aagcggggcg accgggtggc gatctacctc
     3421 ccgatggttc cggaggcggc tatcgccatg ctggcctgcg cgcggatcgg cgcggtgcac
     3481 tctgtggtgt ttggaggatt ctccgccgag tcgctgcaag accggatcaa cgatgcgcaa
     3541 gccgtcgccc tgatcaccgc ggatggcgga tatcggcggg gacaggtcct cccactcaag
     3601 cgcttcgccg acgaagcgct ggcgcactgc ccctcgatca agcactgcat tgtcgtgcag
     3661 cgcctgggcg acgaggcctt tccctctatc caggagggac gcgaccactg gtggcaccgg
     3721 ctgctgcagg cggcctccac cgactgtaag cccgagccga tggacgccga ggatatgctg
     3781 ttcatcctgt acacctcggg cacgaccgga aaacccaagg gaatcgtgca caccacggga
     3841 gggtatctca cccaggtggc cagcacgacc aaatacgtct tcgacctgcg ggaggaagac
     3901 gtcttctggt gcaccgctga tatcggctgg gtcaccggcc attcctacgt ggtctatggc
     3961 cccctcgcca atggtgccac ggtcgtgatg tacgaggggg cgcccgactg gcccgagcgg
     4021 gaccggttct ggcgtctggt cgaaacgtac ggagtgaccg tcctgtatac cgcaccgacc
     4081 gccattcgcg ccttcatgaa gtggggcgcc gagcacgctg acaagcacga cctgtccacc
     4141 ctccggctgc tcggtacggt cggagagccg atcaaccccg aagcctggat ctggtatcac
     4201 gagaacatcg gcgggaaacg ctgcccgatc gtcgatacct ggtggcaaac cgagaccggc
     4261 ggcatcatga tcaccccgct ccccggggtg accaccacaa tacccggctc ggctacggtg
     4321 ccgttccccg gcgtgtcggc cgagctggtc gattccacgg gtaagcggct ggagaagggc
     4381 ggcggctttc taactctgac gcaaccctgg cccggcatgc tccgcaccat ctatggagac
     4441 gacgagcggt accaggagac gtattggagc cggtttcccg gtcgctactt tgccggggat
     4501 ggagccaagc tcgacgaagc cggttactgg tggattctgg gtcgggtgga tgacgtgctg
     4561 aacgtggcgg ggcaccgcat cggcacgatg gaagtggaga gtgcgctggt ggatcatccg
     4621 gcggtcgcgg aggcggccgt ggtgggccgg gcccacgatc tcaagggtca ggccttggcc
     4681 gccttcgtca cgctcaagga aggccggcag gccaccccgg ccctgaagga cgacctcaag
     4741 gaccacgtgg tcaagaagat cggggccatc gcccggccgg acgatatcct gttctcagcc
     4801 gatctcccca agacccggag cggaaagatc atgcgccgac tgctcaagga catcgcggag
     4861 ggccgcaccc tcggcgacac gacgacgctg gcggacccgg cggtggtgaa ccggctgaag
     4921 gagatgtacg aggacaagga atcgtagggg cgcatagcgt gcgcccctac agctcaatct
     4981 gcgcacccag ctcaaccacc cgattgggag gcaggcaaaa gaaggaggtt gcggtccggg
     5041 catttcggtg cataaccgtg aagagtcgct cccgccagag cgccatgccc ggcttgttgg
     5101 tagggatgag cgtttcccgc ccgaggaagt aagtggtctc cagcggcttg agggccagac
     5161 ccttctcccg cagtgccgcc agcgcctggg ggacgttggg ctcctccatg aagccgtagc
     5221 gtagcgtaac ccggtagaat cccactccca gatcctctaa ttttgcccgc tcctctgggg
     5281 gaacgtgcgg tacattttcg gtctccacca ccagaaacac gacccgctcg tggagcacct
     5341 tgttgtgctt aaggttgtgc agcaacgctg gcggagtcgc cgcaggatcg ctgtacatga
     5401 atacggccgt gcccgggacg cgcatcgtgg agttgccgcg gacgtcgtga aggaacagat
     5461 ccgccggaag gaccaccttc tcgagccgct ctcttaggat gagacggcca cgcttccagg
     5521 tagtcataat tccgaacagc accgctgcta cgaccagcgg gaaccatccg ccatggaaga
     5581 tcttaacgat attggcggcc cagaaggcca ggtcgatcgt caggaaaagc ccggtcacc
//
LOCUS       DASYRV010000548         6962 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3862067, whole genome shotgun sequence.
ACCESSION   DASYRV010000548 DASYRV010000000
VERSION     DASYRV010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6962
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3862067"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1012)
                     /locus_tag="VGQ24_14500"
     CDS             complement(<1..1012)
                     /locus_tag="VGQ24_14500"
                     /inference="COORDINATES: protein motif:HMM:NF027964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HEV8456106.1"
                     /translation="MKLLVLGAGLQGCACAYDLLQNPAVTTVTLADVRLDKLPPFLQG
                     DWGARLRTVKLDVTDSAAVAQTFRGQAAVMSAIPYYYNLPMAKSALESGSHFSDLGGN
                     TEIVLEQKKLDREALAKGISVIPDCGLAPGMVNILAAEGIRRLDQAEKVKIFVGGLPQ
                     SPEPPLNYQIVYSLEGALDYYTTPSWVLRGGRPVQVDALSEVEPVEFPSPVGTLEAFH
                     TGGGISTLPFAYQGKIDVMEYKTLRYPGHAAVVRPIRELGLLGNEPIDVKGKKVIPRD
                     VFIAAVSPRLYKPEGRDLVALQVQVTGKKTGKPHSVTFRLIDYYDAKHGISAMMRTTG
                     YSL"
     gene            1604..2251
                     /locus_tag="VGQ24_14505"
     CDS             1604..2251
                     /locus_tag="VGQ24_14505"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEV8456107.1"
                     /translation="MSTPTPTPSPSRRDGAATRQKLLRAGLELFTTVGFRATTTPEIA
                     ARAGVAEGTIYRHFSGKEDLLIAAYHEAQRWGLELVEGPDGDKALPPRNRLIGVAKRL
                     VSAGASDPAMTRMLLRRREQGYLDDSAREAARAFREALQQIVASGKQDGLVRPGPADL
                     WTSVWLALVAFAAERVSAKEWSPDHPQVGLTLEAAWDAISAGQRGSGAAGQAASL"
     gene            complement(2312..3088)
                     /locus_tag="VGQ24_14510"
     CDS             complement(2312..3088)
                     /locus_tag="VGQ24_14510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456108.1"
                     /translation="MSNRKPLTPVLVPLTLFLLTACEGTLPPLRGKIEVGRDAYAVFV
                     GGSAISTDLYAVRGDGGPAIPLTYTPVAELAPALAPNGGAVAFLRGRSLRDSTPATVW
                     LLNLLSGADRELQLPKGAGAPRQVGWSRDGGSLVVRAEGGLYRLDAPPVKAEPRPVPV
                     AERAAAESSLSVLLGDPVFARVVPCRTAGELCVAGDSGVPGFLARGAREAVRWGTDSV
                     ALLIGEKVEIRPLGRGRPRRLTWSNLPENPREMTFFEGRR"
     gene            complement(3140..4735)
                     /locus_tag="VGQ24_14515"
     CDS             complement(3140..4735)
                     /locus_tag="VGQ24_14515"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HEV8456109.1"
                     /translation="MILLLLVQTALQSPLAVRADTVHPVHDALHYDITLVPSDTGTHV
                     LAEVQTTWRLRSTEPVEMELDSAMRVIRVLVDGKPNTRLSRTMYARSESAVEVPHEKP
                     PGDTLSTRVRYRGYPRDGLIVGKNQYGDRTIFADNWPDRAHLWLASQDHPSDKATVAF
                     HVQAPLQDQVIANGVLEKIDTLPYGHAVWHYRLDRPIPVYTMVVGIGRMARTPLPDAN
                     CAVKCIPVSVWAYPRDSAYAVSDPFRRANQIVDYFSDLIGPFPYPSLAHVESSTRFGG
                     MENATAIFYDEKRYGTRNLGEPVVAHETAHQWFGDAVTEADWHHLWLSEGFATYLAML
                     WRRHADGDSAFRAVMRTGANSVFGSKDTERPIIDTAQSELVDLLNTNNYQKGAWVLHQ
                     LRGLTGDSAFYAGLRRYYSVYRDSTALSADFARIMSQTAGKDLDWYFRQALTQPGYPV
                     LDVRWKHKGKKLTLDVTQTQKAEWGTYRIPGLEILVDGKPFRIDVDGGQGRQVIEGVP
                     RKPKKVEADPNGWWLLKATVKGE"
     gene            complement(4917..5747)
                     /locus_tag="VGQ24_14520"
     CDS             complement(4917..5747)
                     /locus_tag="VGQ24_14520"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEV8456110.1"
                     /translation="MMQPSTRGAVSYALVALIAALAGAAGMWLQAVRGPAKPAPAAPH
                     DAVTTHGEWVKIKRGDQTIRAYVAYPERKTKAPAVIVIHEIYGLTDWEPTVADRLAKA
                     GYVAIVPDLLSSKYGKSPSNSDEGRKLIGELEPDRITADLDATYGYVNGLPAVAKDHI
                     GTIGFCWGGGQSFRYATNNPRLKAVVVAYGPAPDTADLKRIKTPVLGIYGENDERINA
                     KLPEVTAAMQSAGKTFTSEVYPGTGHGFLKPGRQGSDGPQVEKAWNRILEFYRARLGK
                     "
     gene            complement(5744..6712)
                     /locus_tag="VGQ24_14525"
     CDS             complement(5744..6712)
                     /locus_tag="VGQ24_14525"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEV8456111.1"
                     /translation="MLRHYLTPSLTLAALAGLVSSSCKPRDSGAKDAALADSAAVYEK
                     ESGMFRQEGETPNLQGPESARYDRDLDVWFVSNINGDPSKKDNNGYISRLRPDGSPYN
                     LKFIAGGTKGVTLNAPKGLAINGDTLWVADIDFARAFSKRTGALIANVSTKGQAKFLN
                     GAAVGPDGAIYMTDTGVIFGLKGDVAHPGPDQVFRITKGGATVALMSPKLEGPNGITW
                     DPQQKRFVIVSFLGKGIYGWKPGEKDFKSIGSGPGQQDGVVMLPDGRLLVTSWADSSL
                     FVLENGQPKKVASAVASPADIDVDPKDSRVAVPQLMLNKVQFFEVP"
BASE COUNT         1199 a         2220 c         2293 g         1250 t
ORIGIN      
        1 agagggagta gccggtggtc cgcatcatcg cgctgattcc gtgcttggca tcgtagtagt
       61 cgatcagacg gaaggtcacg gagtgaggct tgccagtttt tttgccggtc acctgcacct
      121 gcaaggccac caggtcacgc ccctcgggct tgtacagccg aggggaaact gccgcgatga
      181 acacgtcgcg ggggatcacc ttctttccct tcacatcaat tggctcgttt cccaaaaggc
      241 cgagctcccg gatcgggcgg acgaccgcgg cgtgtcccgg gtagcgcagc gtcttgtatt
      301 ccatgacgtc gatcttgcct tgataggcga acgggagggt actgattccg ccgccggtgt
      361 ggaatgcctc gagcgtcccg accggtgagg ggaactcgac cggctccacc tcgctcaggg
      421 catcgacctg caccggcctt ccgccgcgga gcacccatga gggtgtggtg tagtagtcga
      481 gcgctccctc gagtgaatac acgatctggt aattgagcgg tggctccgga ctctggggca
      541 ggccaccgac gaagatcttc accttctcgg cttggtcgag ccgccggatc ccttccgccg
      601 ccaggatgtt taccatgccc ggggcgagcc cgcagtcggg gattaccgaa atacccttgg
      661 ccagcgcttc ccggtcgagc ttcttctgct ccagcacgat ctcagtgttc cccccgaggt
      721 cggagaagtg tgagcccgat tcgagcgcgg acttggccat cggtaagttg tagtagtagg
      781 ggatggcgct catgaccgcg gcctggcccc ggaatgtctg cgcgacggcg gcagagtcgg
      841 tgacgtcgag cttgaccgta cgcagccgtg cgccccagtc gccctggaga aaaggtggga
      901 gtttgtcgag ccggacatcg gccaatgtca ccgtcgtgac cgccgggttc tgcaacagat
      961 cgtacgcgca ggcgcagcct tgaagcccgg cgccgaggac gagcagtttc atcactactc
     1021 cggtagaaaa gctcccgaac atagtcggac gagtgagaag tgagaagtga gaggtgagag
     1081 gtaacaagtg aaaggtgaga ggtaacaagt gaaaggtgag aagtgagagg tgagaggtga
     1141 gggaaaagct ctgtcgcgcg tgttctcggt ttgtcgcgca tcaccgatcg ttcacatcct
     1201 gcgggccatg cgggaccata agagcctgtt ggcatggcag gaggctaacg cagtagtacg
     1261 gacagtaatg tccgccacgc ggggagtcag gcatccctgt atcgaccagc ttcagcgcgc
     1321 agcactgtcc gtacagctca atattgccga gggttatgcc ttgaggtcat cgaggcggtt
     1381 cagaaatcac ctggatatcg catacggctc agcggttgag accgcggaat tactcgagct
     1441 gaccagtgag ttggcccttt ttccagccga tcgtgtcggg cccactattc agcggtgtag
     1501 ccggtgccaa gggctgctcc tgggcctgat caagcgtctt cgaaggagct gacgagcctc
     1561 tcacctctca cttcttacct ctcacctctt acattgttcc tccatgtcca ccccgactcc
     1621 cacgccttct ccatcgcgcc gcgatggcgc cgctacccgc cagaagctcc tccgggccgg
     1681 gctggagctg ttcaccacgg tcggattccg ggcgacgacc actccggaga tcgcggctcg
     1741 cgcgggcgtc gccgagggaa cgatttaccg gcacttcagt gggaaagagg acctgctcat
     1801 tgcggcctac catgaggccc agcgttgggg gctggagctg gtcgagggac cggatggcga
     1861 caaggcgctg ccgccccgca accgtctgat cggcgtagcg aagcggttgg tgagcgcggg
     1921 cgcaagcgat ccagccatga cccggatgct gctccggcgg cgggagcagg ggtacctcga
     1981 tgacagcgcc cgcgaggccg cacgcgcgtt tcgggaggcc ctgcagcaga ttgtcgccag
     2041 cgggaagcag gatgggctgg tgcgccccgg tcccgccgat ctctggacct cggtgtggct
     2101 cgcgctggtg gcgttcgcgg cagaacgggt gagtgcgaag gagtggtcgc ccgaccaccc
     2161 gcaggtcggc ttgacgctcg aggcggcgtg ggacgcgatc tcggcggggc agcggggcag
     2221 cggggcagcg gggcaggccg cgtcacttta agcgcagaag cagaacaagg gcctgcgttc
     2281 tccttgctgc cccgccgccc cgctgccccg cttaccgtct tccttcaaaa aacgtcatct
     2341 ccctcggatt ctctggcaga ttcgaccacg tgagccgccg gggacggccc cggcccagcg
     2401 ggcggatctc caccttctcg ccgatcagca gggccactga atctgtgccc caccggaccg
     2461 cctcccgcgc gccccgggcg aggaacccgg gcacaccgct gtcacccgcg acgcacagct
     2521 cgccggcagt ccggcacggc accacccggg cgaagaccgg gtctcccaac agcaccgaca
     2581 ggctggactc ggcggcggcg cgctccgcca ccggcaccgg ccgaggctcg gctttcaccg
     2641 ggggagcgtc gagccgatag agccctccct cggcccggac gaccagcgat cccccatccc
     2701 ggctccagcc cacctggcgc ggggcaccgg cacccttcgg caactgcagc tctcggtcgg
     2761 cgccgctcag caggttcagc aaccagacgg tggccggcgt cgaatcgcgg agtgaccggc
     2821 cgcggaggaa cgccaccgcc cccccattgg gagcgagggc gggagcgagc tccgcgaccg
     2881 gtgtgtaggt gagaggaatg gcggggccac cgtcgccccg cacggcgtag aggtcggtcg
     2941 agatggcgct gccgcccacg aagaccgcgt acgcatcgcg gccgacctcg atcttgccgc
     3001 gcagtggagg aagggtgcct tcgcaggccg tcaacagaaa aagcgtgagc gggactagga
     3061 caggcgtcag cggtttgcga ttagacatcg gagcgcaaac gtaacgccgc ccgattcctc
     3121 gctgcgctcg gaatgacgat cactcgcctt tcactgtggc tttgaggagc caccatccgt
     3181 tcggatccgc ctcgactttc tttggcttcc gcggaacgcc ctcgatcact tgcctgccct
     3241 gcccgccatc cacgtcgatc cggaacggtt ttccatccac cagtatctcg aggccgggaa
     3301 tacgatacgt cccccactcg gccttctggg tctgagtgac atccagcgtc agcttcttcc
     3361 ccttgtgctt ccagcgcacg tcgagcaccg ggtatcccgg ctgggtgagc gcctgacgga
     3421 agtaccagtc gagatccttc cccgcagtct gcgacatgat cctggcgaag tcggccgaga
     3481 gggcggtgct gtcccgatag accgagtagt agcgacgcag gcccgcgtag aacgcggagt
     3541 cgccggtgag cccccgaagt tgatggagga cccaggctcc cttctggtaa ttattggtgt
     3601 tgagcagatc caccagttcg gactgcgcgg tgtcgatgat gggtcgctcg gtgtccttcg
     3661 agccgaagac cgagttggca cctgttcgca taaccgcacg gaaggcgctg tcaccatcgg
     3721 cgtgccggcg ccagagcatg gcgagatagg tggcgaaccc ttcggagagc cacaggtgat
     3781 gccagtcggc ctcggtgacc gcatcgccaa accactggtg ggccgtctcg tgggccacca
     3841 cgggctcgcc caggttcctg gtcccgtatc gtttctcgtc gtaaaagatc gcggtggcgt
     3901 tttccatccc accgaagcgg gtgctcgatt cgacgtgcgc caggctggga tagggaaacg
     3961 gcccgatcag gtcgctgaag tagtccacga tctgattggc gcggcgaaac ggatcgctca
     4021 cggcgtaggc cgagtcccgc gggtaggccc acaccgagac cggaatacac ttcaccgcgc
     4081 agttcgcatc ggggagcggg gtgcgcgcca tccggccgat gccgaccacc atggtgtaca
     4141 ccggaatcgg cctgtccagc cggtagtgcc agacggcgtg gccgtacggc agggtatcga
     4201 tcttctccag cacgccgttc gcgatcacct ggtcctgcag cggcgcctgc acgtggaacg
     4261 ccacggtcgc cttgtcgctt ggatgatcct gcgacgccag ccagaggtgg gcccggtcgg
     4321 gccagttgtc ggcgaagatg gtgcggtcgc cgtactgatt cttccccacg atcaggccgt
     4381 cacggggata accgcgatag cgcacccggg tgctgagcgt gtccccgggc ggtttctcgt
     4441 gcggcacctc gaccgcgctc tcggagcggg cgtacatcgt ccgggagagc cgggtattgg
     4501 gcttcccgtc caccagcacc cggatgaccc gcatggcgga atcgagctcc atctcgaccg
     4561 gctcggtgga gcggagccgc caggtggtct gcacctccgc gagcacgtgg gtgccggtgt
     4621 cgctggggac gagggtgatg tcgtagtgca gcgcgtcgtg gaccgggtgc acggtgtcgg
     4681 cccggacggc gagcggagac tgcaaagcgg tctgtacgag aaggagtaga atcatcaaac
     4741 gggtgtcacc ctgagcgtag cgagggggcc gaaacagcgt ctgaagaccc tggtggccgt
     4801 gaaaaccatt gtcaccctga gcccttcgca tcgcgcaggg cgaggaggcc gaagctcgaa
     4861 tcgggttccg gccccctcgg gcgcttaggc gccctcaggg tgacaacgtg gggaatctac
     4921 tttcccaatc ttgctcgata aaactctagg atccggttcc acgccttttc gacctgcggg
     4981 ccatcggacc cctgccgccc gggcttcagg aacccatgcc cggtgccggg atacacctcc
     5041 gaggtgaatg tcttcccggc cgactgcatc gcggcggtca cctcgggcag cttggcgttg
     5101 atccgttcgt cgttctcgcc gtaaatgccg agcaccggcg tcttgatccg cttcaaatcg
     5161 gccgtatcgg gcgccggccc gtaggcgacc acaaccgcct tgagtcgcgg gttgttggtg
     5221 gcgtagcgga agctctgtcc tccgccccag caaaagccga tggtaccgat gtggtccttg
     5281 gcgaccgcgg gaagcccgtt cacgtagcca taggtggcat cgaggtcggc ggtaatgcga
     5341 tcgggctcca gctcgccgat cagcttccgg ccttcatccg agttcgaggg cgacttcccg
     5401 tacttcgagg agagcaggtc gggcacgatc gcgacgtagc ccgccttggc taggcggtcg
     5461 gccaccgtgg gctcccagtc ggtgaggccg tagatctcgt ggatcacgat gacggccggc
     5521 gccttggtct tccgctcggg ataggcaaca taggcgcgga tggtctggtc cccgcgcttg
     5581 atcttcaccc actcaccgtg ggtggtgacc gcatcatggg gtgcagcggg tgccggtttg
     5641 gccgggcccc tgaccgcctg cagccacatt ccagccgcac cggccagggc cgcgatcagg
     5701 gcgaccaggg catacgacac cgcgcctcga gtgctgggtt gcatcatggc acctcgaaga
     5761 attgaacctt gttcagcatc agctgcggga cagcgacccg ggagtccttg ggatcgacgt
     5821 cgatgtcggc gggagaggca acggcagagg ccactttttt cggctggccg ttttccagga
     5881 cgaagaggct cgagtcggcc cagctcgtca ccagcaggcg gccatcggga agcattacca
     5941 ccccatcctg ctgaccgggg cccgagccga tcgacttgaa atccttctcg cccggcttcc
     6001 acccatagat gccctttccc aggaaggaga cgatcacgaa gcgtttctgc tgcgggtccc
     6061 aggtgatgcc gttgggaccc tccagcttgg gcgacatgag tgcgaccgtg gcaccgcctt
     6121 tggtaatacg gaatacctgg tcggggccgg gatgagcgac gtcgcccttc aatccgaaaa
     6181 tcaccccggt atcggtcatg tagatcgcac cgtcgggtcc caccgctgcg ccgttgagga
     6241 acttggcttg tcccttagtg ctgacattgg cgatgagcgc tccggtgcgc ttgctgaagg
     6301 cgcgggcaaa atcgatgtcc gccacccaca acgtgtcgcc gttgatggcc agccccttgg
     6361 gcgcattcag cgtgacgccc ttcgtcccac ccgcgatgaa cttgaggttg tacgggcttc
     6421 catcgggccg gagccggctg atgtatccgt tgttgtcctt tttggatgga tcaccgttga
     6481 tgttggacac aaaccagacg tcgaggtcgc gatcgtaacg ggccgactcc gggccctgca
     6541 ggttcggggt ctccccctcc tgccggaaca tgccggactc tttttcgtag acggccgcag
     6601 aatcagccag agcggcatcc ttggcgccag aatcgcgggg tttgcaggag ctggacacca
     6661 ggcccgcgag ggccgccagc gtcaaggatg gtgtgagata gtgccggagc atggtaactg
     6721 tctccactct cagaggaaca ggaaattata agcgggtagc cgcggcagcg gggcggcggg
     6781 aacgagtccg cggggtgggg ttgctctact cttcaggggc cccacccgtc cgcgccactt
     6841 ggtcggcccg caccctcccg gcgtcgaacc gtcgcgcggc ggcgagcatc gtatcgatcg
     6901 tctcgtccac gtccgggtta ccgccccgct tgaagcggag cggattgatc cgggcgacca
     6961 cg
//
LOCUS       DASYRV010000549        10056 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3460199, whole genome shotgun sequence.
ACCESSION   DASYRV010000549 DASYRV010000000
VERSION     DASYRV010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10056
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3460199"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..957
                     /locus_tag="VGQ24_14530"
     CDS             <1..957
                     /locus_tag="VGQ24_14530"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEV8456112.1"
                     /translation="VVRESSTQVPDAYLRDLRSGALTQLTRNQDVTPEFTSLVRKRVV
                     VTRSDGIKFVVRVTLPSGYQAGTRLPGMFWFYPYEYTDQAGYDRTLRTENINRFPASQ
                     PRTIEFLATQGYAVANFDPPVIGETGRMNDNYVSDLTRNLIAVIDELDRQGFIDRTRL
                     GIGGHSYGAFSTVNALVHTPFFKAGIAGDGMYNRTLTPTGFQSERRDLWSGQKTYLEM
                     SPMLSADKLQGALLLYHNLEDQNVGTDPISSIRMMQALRSEGKTAALYLYPYEDHGPA
                     TRETILDLWGRWTAWLDIYVKNAGKPAPKPATVSNGTPPGGF"
     gene            complement(1051..1971)
                     /locus_tag="VGQ24_14535"
     CDS             complement(1051..1971)
                     /locus_tag="VGQ24_14535"
                     /inference="COORDINATES: protein motif:HMM:NF025679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4382 domain-containing protein"
                     /protein_id="HEV8456113.1"
                     /translation="MRYGARFWVPAVLFAALPLASCSDSATQNNPGGQPRVTVRLTDA
                     AGDIVAAVVTISEINLQGSDGKVVLMSSPVTTDLVDLANNTATLVDAVAVPAGTYTQL
                     RFVITGGYVEVENADGTTSIYASSPTYSGLPAGAVVTGDLQMPSLAQSGLKVDFPSTE
                     LEIDEDQDFLVDFNVSESFGKQAGNSGKWVMRPVIKGAVFTTAATVVATLKLNTGVTL
                     PVPPSGAVTLAAFKANLNGEVINFSDPDGDGVFEARFRFLLPGTYALSVQVPAGLGIT
                     TNLTLPVNVTVDAGETETVAVVIQTAVLVP"
     gene            complement(2155..2745)
                     /locus_tag="VGQ24_14540"
     CDS             complement(2155..2745)
                     /locus_tag="VGQ24_14540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456114.1"
                     /translation="MMKRLLAIGYGLLVVAPLAAQQQKKPRIHAVELTFSAGYFQPTG
                     PTGQLGSVELTRKPSWESGAHFGAYSKSGKWGAEVSAGYAPERVSQGGFGSRRTHLTY
                     GTLRALYGKSPRKPGISIMAGAGVSVLHRGYSVMDSDVATNHFGGATSLFVRSPIDDQ
                     VGLRLDAEDLISRADFGSGKKLRNDFVLTAGLGISW"
     gene            complement(2742..3947)
                     /locus_tag="VGQ24_14545"
     CDS             complement(2742..3947)
                     /locus_tag="VGQ24_14545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEV8456115.1"
                     /translation="MGMFEYTAKNTVSGQILKGTLDVPTKDEVIAFIRKNRMILVSVR
                     EAPAQVRMPSFKKKVSTRDVVIFTRQFATMINAGLPLVQSLTILSAQTENKSLKEITK
                     AVVYDVEAGNTLADALRKHPKAFSDLYVNMVAAGEAGGILDTILLRLATFLEKNDALV
                     RKVKGAMVYPGVIMSVAVLAVAVLLVFVIPTFSAMFASVNMTLPFPTRVVIGSSQVLL
                     RWWWLILLSIGAGAFAFRSYYGTPGGRKAVDGAMLRAPVIGDLLRKSAVSRFTRTLGT
                     LISSGVSILDGLEITAKTAGNRVIHDAVMQSRQSIAGGETIAGPLQVSGVFPPMVISM
                     ISVGEQTGGLDDMLTKIADFYDSEVDVAVSALLSLMEPIMIVVLGIIVGGMVVAMYLP
                     IFDMVNAVQ"
     gene            complement(3969..5096)
                     /locus_tag="VGQ24_14550"
     CDS             complement(3969..5096)
                     /locus_tag="VGQ24_14550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HEV8456116.1"
                     /translation="MTLNLRALLQEMIDREASDLHITAGERPKLRVDGEITDCSVEEV
                     LTPKDTLQLAYSVLTETQKKRFEFDDELDFSFGIQNLARFRGNVFKQRGCVAMVLRMI
                     PFSVRTLEDLGLPPIASKLAERPRGLILVTGATGSGKSTTLAAMLDMINKSRKGHIIT
                     VEDPIEFIHRHQNCIVNQREIGTDTKTFASALKYALREDPDIILVGEMRDLETIAAAL
                     TIAETGHLVLATLHTNSAAEAINRIIDVFPSGQQPQVRAQLAFVLEGVITQALLQRSR
                     GKGRVMCCEVMVATPAIRALIREDKIHQIYSALQSGKKFGMQTMVDSLYQLYMNREVT
                     KDECLRVAGDGNEFLRMVGEKPMEEQGIAQMPKATAAQGRR"
     gene            complement(5093..6811)
                     /gene="pilB"
                     /locus_tag="VGQ24_14555"
     CDS             complement(5093..6811)
                     /gene="pilB"
                     /locus_tag="VGQ24_14555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV-A pilus assembly ATPase PilB"
                     /protein_id="HEV8456117.1"
                     /translation="MATTAVPAERLGDILVKEGLLSRERLAQALVEQRSSGMPLGFVV
                     AKQGLVPEVEITRIVARQLRVPAVDLSHFEVDAKILKLIPAEIAKRHVVLPLKREGRT
                     LTVAMACPTDQVLLQELRFITRYDLFPVFAGEFTLRTLIDKYYDASDQQLAAILRDME
                     GLADDVEVLEEIDEDGLAEAQIDDVPVVKLINGLLTDAVQRGASDIHIESFEHELRIR
                     YRIDGALQEVMKPPMKMKAALISRVKILSQLNIAERRMPQDGRLKLKMGNRVIDFRVS
                     TLPCLFGEKIVLRILDKGNLTLDLTTFGFEPKAEQDLLRAILNPYGMVLVTGPTGSGK
                     TTTLYSALQRINTIDSNIMTAEDPIEYNLHGINQVQVKTDIGLTFATALKAFLRQDPN
                     VIMIGEIRDLETGGIAIKAALTGHLVLSTLHTNDAPSTITRLLDMGVEAFNVSAAVNL
                     VVAQRLVRRICTDCRAPTTYRPEELRALVHPGMNLEQIKEIAFSKGKGCDSCSGTGYR
                     GRAGLYEVMAMSPELRRMILRGGSVAELRDQAIEEGMLTLRSSGILRIEQGITTLEEV
                     VKETAA"
     gene            complement(6856..7521)
                     /locus_tag="VGQ24_14560"
     CDS             complement(6856..7521)
                     /locus_tag="VGQ24_14560"
                     /inference="COORDINATES: protein motif:HMM:NF024245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEV8456118.1"
                     /translation="MNREPRAILLLLSLAVAGHAARLLLRPAGPPGELLASNQSPAID
                     PARQRARGERAVRPLGPGERIDVNSASAEEIARLPRVGMSLAKRIVSDRVARGPFRGL
                     AELDRVPGVGPALLRTLSERVSFGAFGAGQSGPGNGAANNRMSGTYAEQPQASPVAPV
                     DLNSALEADLVALPGIGPARARAILAYRRENGPFAAVSDLGRVPGFSQRLVARLTPLL
                     VAR"
     gene            complement(7683..7895)
                     /locus_tag="VGQ24_14565"
     CDS             complement(7683..7895)
                     /locus_tag="VGQ24_14565"
                     /inference="COORDINATES: protein motif:HMM:NF017451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HEV8456119.1"
                     /translation="MDAKGKSLIRSHRDLVVWQRAMDLVDETYALTDSFPKREQFGIT
                     AQMRSAAVSIPANIAEGFGRRTPTSR"
     gene            complement(8000..8908)
                     /locus_tag="VGQ24_14570"
     CDS             complement(8000..8908)
                     /locus_tag="VGQ24_14570"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEV8456120.1"
                     /translation="MRCPLLILMLLTGCKEEAVPPKEFDGQAALQYVQTQLGFGPRIP
                     GSAGHARMAAWLDSLLRTRADSLLVQRWTHVTQRGDSLPLVNFLARFNPAATTRVLLL
                     AHWDTRPKSDGAGSRDSTAPVPGANDGASGVAVLLGMADALKRSPPEIGVDLLFVDGE
                     DYGDFAADADVLLGSRYYAAHQAPGAVPRFAILFDMVGDKDLQILQEGYSLTAAPDLV
                     EEVWSIAERIGHGASFKREQGISLTDDHIPLQQAGIRAIDLIDFTYGGPDNRWHHTPD
                     DSFDKVSAASLQIVGDVGMAVVRLTK"
     gene            9053..>10056
                     /locus_tag="VGQ24_14575"
     CDS             9053..>10056
                     /locus_tag="VGQ24_14575"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEV8456121.1"
                     /translation="MRLLRRHLLRTLAGPFAFAWIAQTGMLMLNQLSRRFGDLVGKGL
                     PGGIIAEVLFLFIPFIVALTLPMAILVAVLYGFSQMGADNELTAMRANGVSVLQMLRP
                     VLAAGILLSVANLFFIDQILPRTNLRLLNLQMDIAQKKPTFAMKEQTINSLPPSQYFL
                     QASRIEPATGRMREVVIYDLSPQGGRRVIYADSGYLSFERNDQDLGIKLYVGRVNEYK
                     TAEPATVNVTRFLTNDIRVRNIQNVFQQSFGTVQKGDREMTTCEMIDWVAGARADAER
                     AAARRRTLAYNDLRAFLQLLAPRDTPAAAASPARRCGAWRSFERWMGRLLLPKPATAQ
                     A"
BASE COUNT         1804 a         3309 c         3138 g         1805 t
ORIGIN      
        1 gtggtgcggg aaagctcgac gcaggtgccc gatgcctatc tgcgcgatct gagatcgggg
       61 gcgctgactc agctcaccag gaatcaggac gtcaccccgg aattcacctc actggttcgc
      121 aagcgcgtcg tggtaacccg ctccgacggc atcaagttcg tggttcgcgt caccctcccc
      181 agcgggtacc aggcgggcac ccggctcccc gggatgttct ggttctaccc ctacgagtac
      241 accgaccagg cgggctatga ccggaccttg cgaaccgaga acatcaatcg cttccccgcc
      301 tcacaacccc gcaccatcga gttcctggcg acgcaggggt atgccgtagc gaacttcgat
      361 cccccggtca tcggcgaaac cggccgcatg aacgacaact acgtctctga tctcacccgg
      421 aacctgatcg cggtgatcga cgagctggat cggcagggtt tcatcgaccg cacccgcttg
      481 gggataggcg ggcacagcta cggcgccttc agcaccgtaa acgctctggt gcacacgccg
      541 ttcttcaagg cgggaattgc gggcgatggc atgtacaacc gcaccttgac gccgaccggt
      601 ttccagagcg agcgacgcga cctctggagc ggacagaaga cctatctcga gatgtcgccg
      661 atgctatccg ccgacaagct gcagggcgct ttgctgctgt accacaacct cgaggatcag
      721 aacgtcggca ccgatcccat cagctcgatc cggatgatgc aggcgctccg ctccgaggga
      781 aagacggcgg cgctctatct ctatccctat gaggaccacg gtcccgcgac ccgcgagaca
      841 atccttgatc tctggggccg ctggactgcc tggctggata tctacgtaaa gaacgcgggg
      901 aagccggcgc ccaaacccgc aaccgtcagc aatgggaccc ctccgggagg cttttagccc
      961 atagcccata gcccatagcc cacagccaac aaagacgaac gcccccggcc tctaccgggg
     1021 gcgccgcctc gacgggtcgt tcaaatcccc ttatggaacg agcaccgccg tttgaatgac
     1081 caccgccacg gtctcggtct cccctgcgtc gacggtcacg ttgaccggga gcgtcaggtt
     1141 ggtcgtgatg ccgagcccgg cgggaacctg aacactgagg gcgtaggtac ccggcagcag
     1201 gaatcggaag cgtgcctcga agaccccgtc gccatccgga tcggagaagt tgatcacttc
     1261 accgttcaga ttcgccttga atgccgccag cgtgaccgct cctgacggag gcaccggcag
     1321 cgtgacgccc gtgttcagct tcagcgtggc gaccaccgtc gctgccgtgg tgaataccgc
     1381 tcctttgatg acggggcgca tcacccactt gccggaattg cccgcctgtt tcccgaagct
     1441 ctcgctcacg ttgaaatcga ccaggaaatc ctgatcctcg tcgatttcca gctcagtgga
     1501 cggaaagtcg accttgagac ccgattgggc gaggctcggc atctggagat cacctgtcac
     1561 gaccgcgccg gcgggaaggc cggagtaggt cggcgaagac gcgtaaatcg aggtggtccc
     1621 gtcggcgttt tcgacctcga cgtagccacc cgtgatcacg aagcgcagct gcgtataggt
     1681 accggctgga accgcaaccg catccaccag cgtggccgtg ttgttggcca ggtcgacgag
     1741 atccgtcgtg accggcgagg acatcaggac caccttgccg tcactcccct gcaaattgat
     1801 ctccgagatc gtaacgacgg cggcgacgat gtctcccgcc gcgtcggtca gccgcacggt
     1861 gaccctcggc tggccacccg gattgttctg agtcgccgaa tcactgcacg aggccagggg
     1921 aagggccgcg aacaaaaccg ccggaaccca gaatcgcgct ccgtatcgca tcgagcttgg
     1981 tctcctctcc ggtttgcgta ctgccagtac aggggaggac gactggagcg ttggctcggg
     2041 cacacgcgat gccgcatggt ggagcgaatc gagcgatgcg cgctcgcaac acaaagcccg
     2101 gcgctaggcc gggcttggtt gagagctgtt agctgatgtc tgctagcgtt agttctacca
     2161 ggaaatcccg agacccgccg tcagcacgaa gtcattgcgg agcttcttgc ctgatccgaa
     2221 atcggcccgc gagatcaggt cttccgcgtc gagccggagt cctacctggt cgtcgatcgg
     2281 actccggaca aagaggctgg tggcgccgcc aaaatgattg gtggccacat cggaatccat
     2341 gacgctgtag ccccggtgga gcacgctcac cccggcaccc gccatgatcg aaatccccgg
     2401 cttgcgggga ctcttcccgt acagcgcccg cagcgtccca taggtcaaat gagtccgtcg
     2461 ggagccgaac ccgccctgcg agacccgctc cggagcgtag ccggcagaca cctccgcgcc
     2521 ccatttgccg ctcttcgagt aggccccgaa atgggcgccc gattcccacg acggtttgcg
     2581 agtcagctcc acggatccca gctgtccggt aggcccggtc ggctggaaat acccggcgga
     2641 gaaggtgagc tcgaccgcgt gaatgcgtgg cttcttctgt tgctgggcgg ccaggggcgc
     2701 cacgaccaat aacccatagc caatagccaa tagccgtttc atcattgcac cgcgttcacc
     2761 atgtcgaaga tggggagata catcgccacg accatgccgc ccacgatgat gccgagcacg
     2821 acgatcatga tgggttccat gagcgagagc aatgcgctga ccgcgacgtc cacctcggag
     2881 tcgtagaagt cggcgatctt ggtgagcatg tcgtcgagcc cgccggtctg ctcgccgacc
     2941 gagatcatcg agatcaccat cggcgggaac acgcccgaga cctgcagcgg cccggcgatg
     3001 gtttcgccgc ccgcgatgga ctggcgagat tgcatcactg cgtcgtgaat cacccggttg
     3061 ccggcggtct tcgccgtgat ttccaggccg tcgaggatgg acacacccga cgaaatcagc
     3121 gttccgagcg tccgggtaaa gcgcgagacg gcggacttcc gcagcaggtc gccgatgacc
     3181 ggcgcgcgca gcatggcgcc gtccaccgcc ttccggccgc cgggcgtccc gtagtacgag
     3241 cggaaggcga aggcgcccgc accgatgctc agcaggatca gccaccacca gcggagcagc
     3301 acctgggagg acccgatcac cacgcgggtg gggaacggca gggtcatgtt taccgacgcg
     3361 aacatcgccg agaaggtcgg aatcacgaag accagcagga cggcgaccgc gagcaccgcc
     3421 acgctcatga tgacgcccgg atacaccatc gcgcccttca ccttgcggac cagcgcgtcg
     3481 tttttctcga ggaaggtggc cagccgcagc agaatcgtgt cgagaatacc gccggcctcg
     3541 cccgcggcca ccatgttgac gtagaggtcg ctgaacgcct tggggtgctt gcggagggcg
     3601 tcggccagcg tgttgccggc ctcgacatca tagaccaccg ccttggtgat ctccttgagc
     3661 gacttgttct cggtctgggc ggacagaatg gtgagcgatt gcaccagcgg cagtcccgcg
     3721 ttgatcatcg tcgcgaactg ccgcgtgaag atgacgacgt cgcgcgtgct gaccttcttc
     3781 ttgaacgagg gcatccgcac ctgcgcgggt gcctcgcgca cgctcaccag gatcatccgg
     3841 ttcttgcgga tgaacgcgat gacctcgtcc ttcgtcggga cgtcgagggt ccctttgagg
     3901 atctgcccgc tgacggtgtt cttggcggtg tattcgaaca ttcccatcgt aggactctcc
     3961 gatcaggatc agcggcgccc ctgcgccgcg gtggccttgg gcatctgagc gattccctgc
     4021 tcctccatcg gcttctcgcc caccatgcgg aggaattcgt tgccgtcgcc ggccacccgg
     4081 aggcactcgt ccttggtgac ctcgcgattc atgtagagct ggtagagcga gtcgaccatc
     4141 gtctgcatcc cgaatttctt gcccgactgc agcgcggaat agatctggtg gatcttgtct
     4201 tcccggatca gcgcccggat cgcgggcgtc gcgaccatga cttcacagca catcacccgt
     4261 cccttgccgc gcgagcgctg cagcagcgcc tgggtgatca cgccctccag cacgaacgcc
     4321 agctgggccc ggacctgggg ttgctggccg gaggggaaga cgtcgatgat ccggttgatg
     4381 gcctccgccg cggagttggt gtgcagggtc gccagcacga ggtgaccggt ctccgcgatg
     4441 gtcagcgccg cggcgatcgt ctcgaggtcg cgcatctcgc cgaccaggat gatgtcgggg
     4501 tcttcgcgca gcgcgtactt gagcgccgag gcgaacgtct tggtgtcggt gccgatctcg
     4561 cgctggttga cgatgcagtt ctggtggcga tggatgaatt cgatcgggtc ttccaccgtg
     4621 atgatgtgcc ctttgcggct cttgttgatc atgtccagca tggccgcgag cgtggtggat
     4681 ttgcccgagc cggtcgcgcc ggtcaccagg atcagcccgc gcggtcgttc cgccagcttg
     4741 ctcgcgatcg gcggcagccc gagatcctcc agggtgcgca cgctgaaggg aatcatgcga
     4801 agcaccatgg cgacgcagcc ccgctgcttg aacacgttgc cccggaagcg cgccaggttc
     4861 tggatgccga aggagaagtc gagctcgtcg tcgaactcga agcgcttctt ctgcgtctcg
     4921 gtcaggaccg aatacgccag ctgaagcgtg tccttgggcg tcaggacctc ttccaccgag
     4981 cagtccgtga tctcaccgtc gacccggagc ttgggacgct ctccggccgt gatgtggagg
     5041 tcggacgcct cccggtcgat catctcctgt agcagcgcgc gcaggttcag cgtcatgcgg
     5101 cagtctcctt tacgacttct tcgagcgtcg tgatgccttg ctcgattctg agaattccgc
     5161 tcgagcgcag ggtgagcatt ccttcctcga tcgcctgatc gcgcagctcc gcgaccgaac
     5221 caccccggag aatcatccgc cggagctccg gagacatcgc catcacttca tacagcccgg
     5281 cgcggccccg gtacccggtg ccgctgcacg aatcgcaccc cttgcctttg gaaaacgcaa
     5341 tctctttgat ctgctcaaga ttcatgcccg ggtgcaccaa cgcccgcaat tcttcgggcc
     5401 ggtacgtcgt cggagcacga caatccgtgc agatccgccg gaccagtcgt tgcgccacca
     5461 ccagattcac ggccgccgag acgttgaacg cctcgacccc catgtccagt aatcgggtga
     5521 tcgtgctcgg tgcgtcattg gtgtgcagcg tggagagtac caggtgcccg gtgagcgccg
     5581 ccttgatggc gatgccgccg gtttccaggt cgcggatctc tccgatcatg ataacgttgg
     5641 ggtcctgccg gagaaacgcc ttgagcgccg tcgcaaaggt gagaccgata tccgtcttca
     5701 cctgcacctg attgatgccg tgcagattgt actcgatcgg atcctcggcc gtcatgatgt
     5761 tggagtcgat cgtgttgatg cgctgcagtg cggaatagag cgtagtcgtc ttgccggatc
     5821 ccgtcgggcc ggtgaccagc accatcccgt acgggttgag aatcgcgcgc agcagatcct
     5881 gctccgcttt gggctcgaac ccgaacgtgg tgagatccag ggtcaggttg cccttgtcga
     5941 gaatccggag cacgatcttc tcgccgaaga ggcaggggag cgtcgagacc cggaagtcga
     6001 tcacccgatt gcccatcttg agcttgagcc ggccgtcctg gggcatccgc cgctcggcga
     6061 tgttgagctg cgaaagaatc ttgacccgcg agatcagcgc cgccttcatc ttcatcggcg
     6121 gcttcatgac ttcctggagg gctccgtcga tgcggtagcg gatccggagc tcgtgctcga
     6181 acgactcgat gtggatgtcg ctggcgcccc gctgcaccgc gtccgtgagc aggccgttga
     6241 tgagcttgac caccggcaca tcgtcgatct gcgcctcggc cagcccgtct tcgtcgatct
     6301 cctccagcac ttcgacgtcg tcggcgagcc cctccatgtc acgcagaatc gccgcgagct
     6361 gctgatcgga ggcatcgtag tatttgtcga tcagggttcg cagcgtgaac tcacccgcga
     6421 aaaccgggaa gagatcgtag cgggtgatga agcggagctc ctgcagcagc acctgatcgg
     6481 tcggacaggc catcgccacg gtcagggtgc ggccctcgcg cttgagcggg agcacgacat
     6541 ggcgcttggc gatctctgcg ggaatcagct tgagaatctt ggcgtcgact tcaaaatggg
     6601 agaggtcgac tgcagggacc cggagttgcc gcgccacgat ccgggtgatt tccacttccg
     6661 gaaccaggcc ctgtttggca accacgaagc cgagcggcat gcccgaagag cgctgctcca
     6721 ccaacgcctg ggcgagccgc tcacgcgaga gcagcccttc cttgacgagg atgtccccca
     6781 ggcgttcagc cggtactgcg gtggtcgcca ttcgctagcc gctacccttc catttcatga
     6841 gagctctcgt ccggcttacc tggccaccaa gaggggggtc aggcgagcta ccagcctctg
     6901 actgaaccct ggtaccctcc caagatctga cactgcggcg aacggcccgt tctcccggcg
     6961 atatgccaga attgcccggg ctcgtgccgg cccgatcccc ggcagggcaa ccaggtccgc
     7021 ttccaaggcc gagttaaggt ccaccggggc gaccggagaa gcttgcggct gctcggcgta
     7081 agtcccggac atgcggttgt ttgcagcgcc gtttcctggg ccgctttgac ccgctccgaa
     7141 ggctccaaag ctgacccgct cggacagggt tctgagcagg gccggtccca cccctggaac
     7201 ccgatccagc tcggcaagac cccgaaaggg tccccgggca acccgatcgg acacgattcg
     7261 ctttgccagt gacatgccaa cccttgggag ccgtgcaatc tcctcggcgg aggcgctgtt
     7321 gacgtcgatc cgctcacccg gaccgagcgg ccggacggcg cgctctcctc gggcacgctg
     7381 gcgagcggga tcgatcgcgg gggattggtt gctggcaagc agctcacctg gcgggccggc
     7441 gggccggagc agcagccggg cagcatggcc ggccacggcc agcgagagca gcaggaggat
     7501 tgcgcgcggc tcgcggttca tgagaggggt gcaggatcag gaatcaggaa gcaggggtca
     7561 ggggtcaggg tgttgccggc gaactaatgc ccgacgcagg ccgccgagcc tccgtccaat
     7621 ttcttctact cgcgaccgga tggtctctac ctcagtgttc gtaacgtatt tccgcctcgc
     7681 gctcatctcg aagtaggtgt tcggcgacca aatccctccg cgatgtttgc cggaatggaa
     7741 accgccgccg atcgcatctg ggcagtgata ccgaactgct cccgcttggg aaagctgtcg
     7801 gtcagcgcat aggtctcatc gaccaggtcc atggcccgtt gccacaccac gagatcgcga
     7861 tgcgatcgga tgagtgactt gcccttcgcg tccatgagct aacctggcgc gcctctctct
     7921 gaattccggc atcgaacgaa cgcaggcggg accgaaagaa atgcagttcc cctgattcct
     7981 gacccctgac ccctgacccc tatttagtca accgcaccac cgccatcccg acatccccca
     8041 cgatctgcag gctcgcggcg ctgaccttgt cgaagctgtc gtccggcgtg tgatgccagc
     8101 ggttgtcggg tcccccatag gtgaagtcga tgagatcaat tgcgcggatg ccggcctgct
     8161 gcaggggaat gtggtcgtcg gtgaggctga tcccctgctc ccgcttgaag ctggcgccgt
     8221 ggccgatgcg ctccgcgatg ctccagacct cttcgaccag gtcgggcgcg gcggtcagcg
     8281 aatacccctc ctgcagaatc tgcagatcct tgtcacccac catgtcgaag aggatggcga
     8341 agcggggcac cgcaccgggt gcctgatgcg ccgcatagta gcgcgagccg agcaggacgt
     8401 cggcatcggc cgcgaaatcc ccgtagtcct ccccgtccac aaagagcaga tcgacgccga
     8461 tctcgggcgg cgatcgcttg agcgcgtcgg ccatgcccag caggactgcc acgccggacg
     8521 cgccgtcgtt cgcgccgggc actggagccg tcgaatcgcg actgcctgct ccatcggatt
     8581 tcggacgagt gtcccaatgc gccagcagga ggacccgcgt ggtcgccgcg ggattgaaac
     8641 gggccaggaa gttcaccagg gggagcgaat cgccccgctg ggtgacgtga gtccagcgct
     8701 gcacgaggag gctgtctgcg cgcgttctga gcagactgtc cagccaggcc gccatccggg
     8761 catgacccgc gctgccggga atccgcggac cgaagccgag ctgagtctgg acgtattgca
     8821 gcgccgcctg cccgtcgaac tccttgggag ggacagcctc ctccttacag cccgtgagaa
     8881 gcatcaggat gagcaaagga cagcgcatgg tccccagagc aggtggcagg tggcaggtgg
     8941 caggtggcag taagactggc cgcaaaccac ctgcaaccta ccacctgcca cctgccacct
     9001 gccacctaac ctgcacctgc cacctgccac ctgccacctg ctaccttttc tgatgcgcct
     9061 gctccgccgc cacctgctcc gcacccttgc cggtcccttc gccttcgcct ggattgccca
     9121 gacggggatg ctgatgctca atcagctctc gcggcgcttc ggggacctgg tcggcaaagg
     9181 cctgccggga ggcatcattg cggaggtgct gttcctcttt atcccgttca tcgtggcgct
     9241 gacgctaccg atggccattc tggtggccgt gctctacggc ttcagccaga tgggcgcgga
     9301 caacgagctc accgcgatgc gggccaatgg cgtgagcgtg ctccagatgc tgcggccggt
     9361 gctcgcagcc ggcatcctgc tcagcgtcgc caacctcttt ttcatcgacc agatcctgcc
     9421 gcgcaccaat ctccggctgc tcaacctgca gatggacatc gcgcagaaaa agccgacctt
     9481 cgcgatgaag gagcagacca tcaacagcct tccgccgtcg cagtatttcc tgcaggcgag
     9541 ccgcatcgag ccggccaccg ggcggatgcg cgaggtggtg atctacgacc tgagtccgca
     9601 gggaggccgg cgggttattt acgccgacag cggctacctg agcttcgagc ggaacgacca
     9661 ggacctcggc atcaagctct acgtgggtcg cgtcaacgaa tacaagaccg cggagccggc
     9721 caccgtcaac gtgacccgct tcctgaccaa cgacattcgg gtgcgcaaca tccagaacgt
     9781 ctttcagcag agcttcggga cggtgcagaa gggcgaccgg gagatgacga cctgcgagat
     9841 gatagactgg gtcgccggcg cgcgggcgga cgcggagcgg gccgccgccc gccggcgcac
     9901 tctggcctac aacgacctgc gcgccttcct gcagctcctc gcaccgcggg atactccggc
     9961 cgccgctgcc tcgcccgcac gccgctgcgg cgcctggcgg agcttcgagc gctggatggg
    10021 ccgtttgctg ttgccgaagc cggcaaccgc acaggc
//
LOCUS       DASYRV010000550         3757 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2626727, whole genome shotgun sequence.
ACCESSION   DASYRV010000550 DASYRV010000000
VERSION     DASYRV010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3757
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2626727"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(401..2110)
                     /locus_tag="VGQ24_14580"
     CDS             complement(401..2110)
                     /locus_tag="VGQ24_14580"
                     /inference="COORDINATES: protein motif:HMM:TIGR00757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HEV8456122.1"
                     /translation="MKREILINGSQRETRVAILEDDRLVELLVDRPDYRRTVGDIYLG
                     RVEAVLPGIQAAFVDIGQEKSAFLHASDLLEPDEDEEPDDEEPDDPAEAEVPATAESA
                     VEEQVAEESGQERKGGWRSRDRRRRRRGNGGVAATEQPAGQGRQREISPRRALPNIQD
                     ILKKGQNLPVQVTKEPIGSKGCRVTAQISLPGRFLVYMPYASKVGVSRKIESREQRAK
                     LREMVSKLLPKDTGGVIVRTVAEGVTEEHFRREIDSLMALWKKINRKKSFVRRAPALL
                     QRETSLTRGIIRDLFSSKVDALYVDMKELYNEIEQYLQQIDPDLMSRVHLYTDATPLF
                     DKFDIESEIRDLFKARVELPTGGSLVIQPTEALISIDVNTGRYTGKKDPEKTILRTNL
                     EAAREIARQIRLRDIGGIIVCDFIDMETRSNREKVLQELRTHLGRDRARTKALAVSEL
                     GLVEMTRQRVRPSLWHSMTTDCPTCAGTGRVFTPEVVSRRLERALRRAGHERRERQLT
                     VRLHPEVALYLLEEEPRLLQTLSKITGVDIELRDDPMMRLDEFRLMSRPAGRDVTDLY
                     AVA"
     gene            complement(2367..3584)
                     /locus_tag="VGQ24_14585"
     CDS             complement(2367..3584)
                     /locus_tag="VGQ24_14585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HEV8456123.1"
                     /translation="MDDSLYFNEQHHQVREMVRDFSRTHIAPVARELDQTSTFPWDNI
                     KAMGELGLLGVPWGEELGGAGLDQLSYYITIHEMAKVDASHALTISAHTNLGTSPIVE
                     FGTEEQRRRYVPLLASGKVLGGFGLTEPGAGSDAGGTATTAVDKGDHYLLNGSKIFIT
                     HAGVGEIFSVTARTEPGKSNKGITSFIVTKDTVDLEKCRTIGVGHASDLPKTRGVRAG
                     KKEDKMGWRASDTRELIFEDAVVPKENLLGQPGYGFINFLKTLDAGRIGIAALSLGIA
                     EGAYEEALHYAGQRKQFGRPIGSFQAISFQLADMAMEIEAGTHLLYHAAWLKQNGRPF
                     KKEAAMAKLYCSELAMRTTTKAVQIFGGYGYLTDYPVERMMRDAKVCEIGEGTSEIQR
                     IVIGRQILGEIVD"
BASE COUNT          612 a         1221 c         1183 g          741 t
ORIGIN      
        1 caagtggcct gggctatacg gccgcggcct tccccgtttc ccgccgctct ctccggcgtc
       61 tgttcgccag tggaatccgt aatggccggg ccgcactccg aacggccctg ttgctaccca
      121 cggaagtgcg tcggcgccac aggtagacca gccctaccag gtccactacg gctgccaggc
      181 ctatgaatat ccacggaaac ggtaagccag tcatggcttt gccacctcgg ggcctgctcc
      241 tatcaaagcg ttctggtgaa ttgaggcgtg acggaggatc gatttgcatt ttctgcgcca
      301 gccgactccc gctacgcgga ataacagggt gattcggctt cccccactta ccccctgccc
      361 cgcttcgccg tctgccccgc ttccccgctt ccccgcctct ctacgccacc gcgtaaagat
      421 ccgtcacatc ccgcccggcc ggccggctca tcagccggaa ctcatccagc cgcatcatgg
      481 gatcatcccg gagctcgata tccacgccgg tgattttgct gagggtctga agcaggcgag
      541 gctcttcctc caggaggtac agcgctacct cggggtgcag ccgcacggtg agttggcgct
      601 cgcgccgctc gtggccggcg cgcctgagcg cacgctccag acggcgagag accacctcag
      661 gggtgaagac ccggccggta ccggcgcagg tggggcagtc cgtcgtcatc gagtgccaga
      721 gcgatgggcg cacccgctgc cgggtcatct ccaccagtcc cagctcggag accgccaagg
      781 ccttcgtccg ggcgcggtcc cttcccaggt gagtccggag ctcctgaagg actttctcgc
      841 gattcgatcg cgtctccatg tcgatgaagt cgcacacgat gatgccgccg atgtcgcgca
      901 accggatctg ccgggcgatc tcccgtgcgg cctcgaggtt ggttcggagg atggtctttt
      961 cgggatcctt cttcccggta tatcgccccg tgttcacgtc gatgctgatg agggcctcgg
     1021 tcggctggat gaccagagag ccgccggtgg gaagctcgac ccgggccttg aacaagtcgc
     1081 ggatctccga ctcgatgtcg aacttgtcga acagcggggt ggcatcggtg tagagatgaa
     1141 cccgggacat cagatccgga tcgatctgct ggaggtactg ctcgatctcg ttgtacagct
     1201 ccttcatgtc gacgtagagc gcgtccacct tggagctgaa gaggtcgcgg atgatgccgc
     1261 gggtcagact ggtctcacgc tggagcagtg ccggcgcccg ccgaacgaag ctcttcttgc
     1321 ggttgatctt cttccagagc gccatgagcg agtcgatctc gcggcggaaa tgctcctcag
     1381 tcacaccctc ggcgaccgtg cggacgatca ccccgccggt atccttgggc agcagcttgg
     1441 agaccatctc gcgcagcttt gcccgctgct cgcggctttc gatcttccgg cttaccccca
     1501 ccttcgatgc gtagggcatg tacaccagga agcggccggg aagggagatc tgggcggtga
     1561 ccctgcatcc cttcgagccg atcggctcct tggtgacctg gacggggagg ttctgaccct
     1621 tcttgaggat gtcctggata ttcgggaggg cccggcgagg tgagatctcc cgctgccggc
     1681 cttgaccggc gggctgttcg gtggcggcta cgccgccgtt cccccgccgc cgccgccgcc
     1741 ggtcccggct gcgccaaccg cccttccgct cctggccgga ctcttcggcg acctgctcct
     1801 cgacagccga ctcggcggtg gcaggtactt cagcctccgc ggggtcgtcc ggctcctcgt
     1861 cgtccggctc ctcgtcttca tcgggctcga ggaggtctga ggcgtgcagg aaggcgctct
     1921 tttcctgacc gatatcgacg aaagcggcct gaatgccagg aaggacggcc tcgactcggc
     1981 ccaggtagat gtcaccgacg gtgcgacggt aatcagggcg gtcaaccaac agctctacca
     2041 gccggtcgtc ttcgaggatg gccacgcggg tctcccgctg gctcccattg atcaggatct
     2101 cgcgcttcaa ggttccaggc ctcggttact gcacaggtaa tgagaacgcg ctcccccggc
     2161 tggcctgccc accaccatac gaggagcatg ccgcgagaga gcgcgtcgct gctggggcta
     2221 attatatgaa ggaggcgagt ttagggcaat gatcaggggc tactggctat tggctattcg
     2281 ccgttggcta cgtcggtgag atgtcggacg cccgagactg cgcctgcggg agtgacagaa
     2341 tggcccatag cccatagcca atagccctaa tcaacgatct ccccgagaat ctgccgcccg
     2401 atcacgatcc gctggatttc gctggtgccc tcgccgatct cgcagacttt ggcatcacgc
     2461 atcatccgct cgaccgggta atcggtgaga taaccgtagc cgccgaaaat ctggaccgcc
     2521 ttggtcgtag tgcgcatggc gagctcggag cagtacagct tggccatggc cgcttctttc
     2581 ttgaagggcc ggccgttctg cttgagccag gcagcgtggt agagaaggtg agttccggcc
     2641 tcgatctcca tcgccatgtc cgcgagttgg aagcttatcg cctggaagct cccgatcggg
     2701 cgaccgaact gcttccgttg ccccgcgtag tgaagcgcct cttcgtaggc accctcggcg
     2761 atgccgagcg acagggcggc gatgccgatc cgtccggcgt cgagtgtctt gaggaagttg
     2821 atgaagccgt acccgggctg gccgagcaag ttctccttcg gaaccactgc gtcctcgaag
     2881 atgagctcgc gtgtgtcgct tgcccgccag cccatcttgt cttccttctt gcccgcgcgg
     2941 accccccggg ttttcggaag atcggaggcg tggccgaccc cgatcgtgcg gcacttctcg
     3001 agatcgacgg tgtccttggt gacgatgaag ctggtgatac ccttgttgct cttgcccggc
     3061 tcggtccgcg cggtaacgga gaagatctct ccgaccccgg catgggtgat gaagatcttg
     3121 gagccgttca gcaggtaatg atcgcccttg tccaccgcgg tggtggcggt gccgcccgcg
     3181 tcgctgccgg cccccggctc ggtcaggccg aacccgccga gcaccttccc cgaggcgagc
     3241 agcggcacgt atcggcgccg ctgctcctca gtgccgaact ccacgatcgg tgacgtgccc
     3301 agattggtgt gcgcgctgat ggtaagcgcg tggctcgcgt ccaccttggc catctcgtgg
     3361 atggtgatgt agtaggagag ctggtccagg ccggcgccgc cgagctcctc accccagggg
     3421 accccgagga ggcccagctc gcccatggcc ttgatgttgt cccaggggaa cgtggaggtc
     3481 tgatccagct cccgggccac cggcgcaatg tgggtccggg aaaagtcccg caccatctcg
     3541 cggacctgat ggtgctgctc gttgaagtaa agggagtcgt ccatagcagc accaaactaa
     3601 ccgtccgtgc tgcgtgggcc aaccgcttcc gttacgaaca acttttcagg tttagggctt
     3661 gggggactaa gcggtcagag agtcggtctc tccgcagctg gtgggcatga atcagacaga
     3721 gaagtccaac ctcccgcttc tggaggatac tggcggg
//
LOCUS       DASYRV010000551         1796 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2411880, whole genome shotgun sequence.
ACCESSION   DASYRV010000551 DASYRV010000000
VERSION     DASYRV010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1796
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2411880"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(11..274)
                     /locus_tag="VGQ24_14590"
     CDS             complement(11..274)
                     /locus_tag="VGQ24_14590"
                     /inference="COORDINATES: protein motif:HMM:NF012442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEV8456124.1"
                     /translation="MAERVDKPELVQRVARRLDRDGETVAEIVDGFLEEVYAALKGGE
                     GVSLRGFGSFYVRVERDSWVFKFNPSQRLRALFGWSSTYRGPL"
     gene            complement(418..849)
                     /locus_tag="VGQ24_14595"
     CDS             complement(418..849)
                     /locus_tag="VGQ24_14595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456125.1"
                     /translation="MPRTRGWVFTPDRGGTPIPEPVRRRTKERILRYAEQQFAGCYTR
                     LDIRFHGQFCYVDAYTEPAPLPGDWPPADWPETREEYLERLRSTPTKLCRLRYFGGED
                     RWGFAFYTYSNERYELSVFPSGEFLGPPEEAFGVAAGAYLR"
     gene            complement(942..1631)
                     /locus_tag="VGQ24_14600"
     CDS             complement(942..1631)
                     /locus_tag="VGQ24_14600"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEV8456126.1"
                     /translation="MLLPVLPRPRLPKLVSPVLPVAQVLGPMEITVTPPLYDYLAFPS
                     HERLPFALHTREGKVVRLPDWLILGSVLVAPPIDSADPRAVYQRIAHDLRMQILNGDL
                     LPGSALPSETELVRRYGSSRGPVRQAISLLRSEGLIDSHQGRGVFVRQRPRTRRLSIE
                     GVADRINGALDSVEDVDGRLEVLRYTPTAAPAEVTDRLALPEGARVLARRFRFFVEDR
                     PALLSEYLFRS"
BASE COUNT          312 a          613 c          603 g          268 t
ORIGIN      
        1 catcgtgggc tcacagcggc ccgcggtagg tcgacgacca accaaacagc gcgcgcaggc
       61 gctgcgacgg gttgaacttg aacacccagc tgtcccgctc cacccggaca tagaaggacc
      121 caaagccacg cagggacacg ccctcgccgc ctttcaacgc cgcatagacc tcctccagga
      181 acccatccac gatctcggcg accgtctcgc cgtcccggtc cagccgccgc gccacccgct
      241 gtaccagttc tggcttgtcg actcgctcag ccatccaagc tctcgcgctc cttccgggag
      301 ggtgttgctt gcccggccgc cacgtccgcg gcgtggcatg ccatgccgcg catgccgatc
      361 ctcaccgatt gctcacctcg ccgcccgtgg cgtggccctg cactgccgcg cggccgttca
      421 gcgtaggtac gccccggccg cgaccccgaa ggcctcctcg ggcgggccga gaaactcacc
      481 cgacgggaag accgacagct cgtagcgctc gttgctgtag gtgtagaagg cgaagcccca
      541 gcggtcctca ccgccgaagt agcgcaggcg gcacagcttg gtcggagtgg aacgcagccg
      601 ctccaggtac tcctcgcgcg tttccggcca gtccgcgggc ggccagtcgc cagggagcgg
      661 cgccggttcg gtgtaggcgt cgacgtagca gaactggcca tggaagcgga tatcgagccg
      721 ggtgtagcag ccggcgaact gctgctcggc gtagcggagg atgcgctcct tggtgcggcg
      781 cctgaccggc tcagggatcg gcgtgccgcc acggtcggga gtgaagaccc agcccctcgt
      841 tcgtggcacc agtgacctcg acgctcgtcc tcatcgctct cgcacgatgc acgcagagct
      901 tgacgtaccc cccacggtgc ccgccactgg cctcggatcg gctaggacct gaatagatac
      961 tccgagagga gcgccgggcg gtcctcgacg aagaagcgga agcggcgagc cagcactcgg
     1021 gccccctccg gcaaagccag gcggtcggtc acctcggccg gcgccgcggt aggcgtgtag
     1081 cggagcacct caagccgccc atcaacgtcc tcgacagagt ccagagcccc gttgatccga
     1141 tcagccactc cttcgatcga gagccggcgg gtcctgggcc gctggcggac gaacacccca
     1201 cggccctggt gggagtcgat cagcccctct gatcgcaaga gactgatcgc ctgccggacc
     1261 ggtccccgcg aactgccgta gcggcggacg agttcggtct cggatggcag ggcgcttccc
     1321 gggagcagat cgccgttcag gatctgcatg cggagatcgt gggcgatccg ttggtagacc
     1381 gcgcgaggat cggcggaatc aatggggggc gccacgagca cgcttcctag gatcagccag
     1441 tcggggagcc tgactacctt accttcacga gtgtgcagcg cgaagggcag gcgctcgtgg
     1501 gacgggaagg ccaggtagtc gtagagcggg ggagtcaccg tgatctccat tgggccgagc
     1561 acctgggcta cgggcagcac cggcgacacc agcttcggca gccgaggccg tggcagaact
     1621 ggcagaagca caggcgtgcg gcgatcaggc tcagagcatg ccgaacaagg gtcgtggcca
     1681 tggagtccgc tcccttcacg gaccgaccgg tgtccggtcg gtatgggatc gtggtggatg
     1741 cggccgcaat gccaggaaac gccaagtcag ctgtccgcgt cgagtaggtt aaagct
//
LOCUS       DASYRV010000552         8794 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3462220, whole genome shotgun sequence.
ACCESSION   DASYRV010000552 DASYRV010000000
VERSION     DASYRV010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8794
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3462220"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1706)
                     /locus_tag="VGQ24_14605"
     CDS             complement(<1..1706)
                     /locus_tag="VGQ24_14605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456127.1"
                     /translation="MVSPKIVSPSLVLGLVVLAACSQSTSSSRSSAPSPSESRSTAAP
                     KPDPRVGLRGGKTGAAEAVWNLRVVSKTPPSAQFVDGINSDLAFTGHYAIQGSFNGYQ
                     VWDIRDPSRPTLETAYVCPGSQSDVSVYRNLLFVSGENLAARLDCGAQGVEDTVSSER
                     LRGIRIFNISDIAHPKNVGNVQTCRGSHTHSLLIDPKDRSNVYVYISGQAPVRSSNEL
                     PGCVSAPKDPNSALFRIEVIKVPLARPDQAAIVSSPRIFSNLVAPPTHGDAPEDSVAA
                     VKELAEAKAHGGFVGRFHGKEEVIHPMWVAQLLDSVVKARGGRGKPTRADSAALRQAL
                     PEIVAGAIKAHEAQMPDSNAGPTQCHDITLYPEIGLGGGACAGYGLLLDIRDPANPQR
                     IGAASDSNFSYWHSATFNNQGSKILFSDEWGGGMQPKCRRTDKPEWGADALFTINNRK
                     MQFQSYYKLPAPQTTEENCVAHNGSLIPIPGRDVMVQAWYQGGVSVFDWTDPKHPKEI
                     AYFDRGPWDPAKLELGGYWSTYWYNGYIYGSEILRGLDIFELKPSGFISQNEIDAAKS
                     VHL"
     gene            complement(1986..4256)
                     /locus_tag="VGQ24_14610"
     CDS             complement(1986..4256)
                     /locus_tag="VGQ24_14610"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEV8456128.1"
                     /translation="MLALLLLLQASGQSSGAVVEGKGSPTAEIPRLESEVQIDGRLDE
                     PAWSRATRLTGFWQYQPVDGRPAEEQTEVLVWYAPAAIHFGIIAHDRNPAAIRATVAD
                     RDNIDNDDYVVLDLDTFHDRRRAFFFAVNPLGVQADGVRSEGAGQVSSLIPGSVDKNP
                     DFTWDSKGRITDRGYEIEIRVPFRSLRYPGSRPQTWGFNVTRMVQRTGYTDTWTDVRR
                     ANASFLGQEGALGGLHDMRHGVTVEAQPFVTATADGSRDVLSGEFTREDVNPDAGLNL
                     RLGFSSYALDATVNPDFSQVESDEGQVTVNERFALFFPEKRPFFLEGIELFGSPQTLV
                     YTRRIVNPKAGAKLTGKFGQLGVAHLTAVDQTDTADAWFNITRIRRDFGKNSIAGLTF
                     TNRDQSGAHNRVLAGDFRYVWGLYYAQLQYGRSWTSDGAGSRNASIWQAEYDRTGRSW
                     GFNYLLNGQGAGFAAQAGFVNRLRSGVVTGHAFNRFTHYGARGALLENLTVFFGPERT
                     WLYDHFGFKPGLEGFEQVDATFQLRGGWELNGHVERQFVNFQDSSFADYTIGSAAGPA
                     YQPADDFSGFTGEAKVTTPTWRQLGATVSYGRGRAAIFQEGATGRGWQLTGGMDLRPT
                     STIRITALGTVFRLFRLDGSEFARSTIPRLKVEYQPNRALFFRVIGEYRSERRAPLLD
                     PASGDSLFVGGVAQPTRELNGLRVDLLASFEPTPGTVAFLGYGSSLESDAEFNWSRLE
                     RVNDGFFVKLAYQVRR"
     gene            complement(4491..5195)
                     /locus_tag="VGQ24_14615"
     CDS             complement(4491..5195)
                     /locus_tag="VGQ24_14615"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: protein motif:HMM:NF001453.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HEV8456129.1"
                     /translation="MWRGLLLTLALTAPAAAQREGDGHWWRQARESLAVRLALQGIED
                     PTTLAAIRTVPRHEFVPPEYRSLAYEDLPLPIGHDQTISQPAVVALMTQLIAPSPGKR
                     VLEVGTGSGYQAAVLAQAGCRVWTIEIFGTLAKHARARLARLGYSSIHVRHGDGYAGW
                     PAEAPFDAILVTAAADSVPPALLKQLAPGGRLVMPVGDQVAHQELVVVQKDAAGRLTS
                     RQLVPVRFVPLLRGVR"
     gene            5350..5880
                     /locus_tag="VGQ24_14620"
     CDS             5350..5880
                     /locus_tag="VGQ24_14620"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgcJ/EcaC family oxidoreductase"
                     /protein_id="HEV8456130.1"
                     /translation="MLHFTRFLVALLILGAACQPRPKTETGMAGAGSDAAAARLSDED
                     KASVRAVDTQWARAAKAGDGQAIAALYASDAILLPPGEPMIKGEAAKKYWVDFVNGFS
                     GPIELNTMAVEGGGDVASAIGTYTMSLTPRKAGAKPLPTEEGKYLEVLRRQDDGSWKI
                     IYDMWSPNAPPAPAKK"
     gene            5883..6350
                     /locus_tag="VGQ24_14625"
     CDS             5883..6350
                     /locus_tag="VGQ24_14625"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEV8456131.1"
                     /translation="MAALRKQLIKLLSWEDAHVGFDAAVAGLPPPLRGTAPAGLPYSP
                     WQLVEHLRITQHDILDFCRNPGYKEMSWPKDYWPPGASPPSAAAWDASIEQFRHDRSA
                     LEVLAGDPAIDLEARIPHGTGQTYLRELLLAADHAAYHIGELIVVRRLLGAWR"
     gene            6352..6948
                     /locus_tag="VGQ24_14630"
     CDS             6352..6948
                     /locus_tag="VGQ24_14630"
                     /inference="COORDINATES: protein motif:HMM:NF018446.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_function: GO:0015252 - proton channel activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM175 family protein"
                     /protein_id="HEV8456132.1"
                     /translation="MGTGRLEAFSDGVIAIIITIMVLELKVPHGTELSSLRPLWPVFL
                     SYVLSFINLGIYWNNHHHMTHVTERVSGKVLWANLHLLFWLSLFPFVTGWMGENHFAP
                     APTALYGVVMLLAAIAYWILLRAILAVQGPHSLLAAAVGRDFKGKLSPLLCLIAIPSA
                     FIREWIAGGLYVIVALMWLIPDRRIERRLSSSARGNDL"
     gene            complement(6943..7842)
                     /locus_tag="VGQ24_14635"
     CDS             complement(6943..7842)
                     /locus_tag="VGQ24_14635"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEV8456133.1"
                     /translation="MRVFLTGATGYIGTAVAERLRAASHELTALARSDASAAKLRSAG
                     IQPVRGDFSDPKSVGSAAGAADGGISLATTYDPSIDGPAIDAILDAMAGSNKPFIYTS
                     GIWSHGDTGGKVVDESSPPNPVALVAWRQKVEDRVLEAATHGIRSVVIRPAIVYGRAG
                     GIPAGFVESARKEGAARYVGTGKNRWPLVHVDDLADLYLLALESAPPGTLLLGVSGPS
                     RPVSEIAAAASRGAGAGGRTVATPLEEARKKLGGYADALVLDQQASGKRAQELLGWRP
                     HRPDVLEEIGHGSYAAVAQGNGS"
     gene            7924..8385
                     /gene="aac(6')"
                     /locus_tag="VGQ24_14640"
     CDS             7924..8385
                     /gene="aac(6')"
                     /locus_tag="VGQ24_14640"
                     /EC_number="2.3.1.82"
                     /inference="COORDINATES: protein motif:HMM:NF043067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047663 - aminoglycoside
                     6'-N-acetyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside 6'-N-acetyltransferase"
                     /protein_id="HEV8456134.1"
                     /translation="MSADEFRVRPARPADAVEWGRLRHALWPAESVHELTAEAEAFFT
                     GGDNLLRAVLLVEASDGALAGFAELSFRPYAEDCKTSPVAFLEGWYVIPSARRQGAGR
                     ALVAAAEEWARDQGCREFASDTELDNTGSAAAHRALGFDDAGAIRCFRKNL"
     gene            8407..>8794
                     /locus_tag="VGQ24_14645"
     CDS             8407..>8794
                     /locus_tag="VGQ24_14645"
                     /inference="COORDINATES: protein motif:HMM:NF015747.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEV8456135.1"
                     /translation="MAPSIPKRFGVLGSGEVGQVLAKGLATNGYDVRIGTRTPGKLAQ
                     FSKSTGIREGSFQEVAAWAEAVVLAVLGTAALDAVALAGPSNLAGKLVIDTTNPISNE
                     PPEDGVLRYFTGPNESLMERLQAAHPR"
BASE COUNT         1468 a         2887 c         2850 g         1589 t
ORIGIN      
        1 aggtgcaccg acttggcggc gtcgatctcg ttctgggaga tgaatccgct cggcttgagc
       61 tcgaagatgt cgagaccgcg caggatctcg gagccgtaga tgtagccatt gtaccagtag
      121 gtggaccaat agccccccag ctccaacttc gccggatccc aggggccgcg atcgaagtag
      181 gcgatctcct tcgggtgctt gggatcggtc cagtcgaaca ctgagacccc gccctgatac
      241 cacgcctgca ccatcacgtc ccggcctgga atcggaatca gcgagccgtt gtgggccaca
      301 cagttctcct ccgtcgtctg cggggccggc agcttgtagt agctctggaa ctgcatcttc
      361 cggttgttga tcgtgaagag tgcgtccgcc ccccactccg gcttatccgt cctccggcac
      421 ttgggctgca tgccgccgcc ccattcgtcg gagaagagga tcttgctgcc ttggttgttg
      481 aacgtggccg aatgccagta ggagaagttg gaatccgatg ccgcaccgat gcgctgggga
      541 ttggccggat cgcggatatc gaggagcagc ccgtagccgg cgcatgcgcc gccgcccagc
      601 ccgatctccg gatacagggt gatatcgtga cattgggtgg gacccgcgtt cgagtccggc
      661 atctgggcct catgcgcctt gatcgctccg gcgacgatct ccggcagcgc ctggcgcaac
      721 gccgcgctgt cggctcttgt cggcttccct ctaccccctc gcgccttgac cacgctgtcc
      781 agcagctgcg ccacccacat cgggtgaatt acctcttcct tgccatggaa cctgccgacg
      841 aacccgccgt gggccttagc ctccgccaac tccttgacgg cagcgacgct gtcttccggc
      901 gcgtctccgt gcgtgggcgg cgcgacaaga ttgctgaaga tccggggcga gctcacgatc
      961 gcggcctggt ccggacgcgc cagcggaacc ttgatcacct cgatgcggaa gagcgcggag
     1021 ttgggatcct tgggtgcact cacgcaaccc ggcagctcgt tggacgaccg caccggcgcc
     1081 tgccccgaga tgtagacata gacgttcgag cggtccttgg gatcgatgag cagggagtgg
     1141 gtatgcgagc cccgacaggt ctgcacgttg cccacgttct tggggtgggc gatatcgctg
     1201 atattgaaga tccggatgcc acgcaaccgc tcgctgctga ccgtgtcctc gaccccctgg
     1261 gccccgcagt cgagccgtgc ggccaggttc tcgccggaga cgaagagcag gttccggtaa
     1321 accgagacgt cgctctggga cccgggacag acgtacgcgg tctccagggt gggccggctc
     1381 ggatcgcgga tgtcccacac ctggtacccg ttgaagctgc cctgaatggc ataatgaccg
     1441 gtgaaggcca gatcggagtt gatgccatcc acgaactgcg ccgacggcgg cgtcttggag
     1501 accacgcgca gattccacac cgcctcggca gcaccggtct ttccgcctcg cagacctacc
     1561 cgcgggtcgg gcttgggcgc cgcggtggac ctgctttcgc tcggcgatgg agcactggag
     1621 cgagatgagg aggtcgattg ggagcaggct gccaagacaa cgagtccgag gacgagtgag
     1681 ggcgacacta tcttggggga taccatgccg ggttccttgg taggggctat gggctatgag
     1741 ctgtgggctg tgacccatag ccacaaacgg gtaaacgact agagaggttt caggcctatg
     1801 cccgaatggt agatactacc aaagccggaa gggttggtta gcggcatggc ggcatcccct
     1861 ttcgccccgt ctcatcgccc tgccctacga cgcgagctcc tcctgcctcc gcggtccggc
     1921 caaggcacca ccgctcggga tgacgcgcga gcgctgatgt cttccccgct tccccgcgtc
     1981 cccgcttatc gcctcacctg atacgccagc ttcacaaaga acccatcgtt cacccgctcc
     2041 agccgagacc agttgaactc cgcgtcgctc tcgagcgagc tgccgtagcc cagaaatgcc
     2101 accgtccccg gcgtgggctc gaaggaggcg agcaggtcga cccgtaaacc gttgagctcc
     2161 ctggtgggct gagccacgcc gcccacgaac agcgagtcac cgctggcggg gtcgagcagc
     2221 ggggcccggc gctccgagcg gtattccccg atcacccgaa agaacagtgc ccggttcggc
     2281 tggtactcta ccttgagccg gggaatggtg gatcgggcga actcgctgcc atccagccgg
     2341 aacagtcgga acaccgtgcc gagcgccgtg attcgaatgg tggacgtggg tcgcagatcc
     2401 atcccgccgg tcaattgcca gccccttccg gtcgctccct cctgaaagat tgcggcccgc
     2461 ccccggccat acgacacggt cgctccgagc tgccgccagg tgggcgtggt gacctttgct
     2521 tccccggtga agccggaaaa gtcgtccgcc ggttggtacg cgggccccgc agcactcccg
     2581 atggtgtagt ccgcgaagct gctgtcctgg aagttcacga attgccgctc cacgtggccg
     2641 ttgagctccc acccgccccg gagctggaac gtggcgtcca cctgctcgaa cccttcgagt
     2701 ccgggcttga acccgaaatg gtcatataac caagtccgct ccgggccgaa gaacacggtg
     2761 aggttctcca gcagcgcgcc ccgagccccg tagtgcgtga accggttgaa cgcgtgcccg
     2821 gtcaccaccc cgctgcggag ccgattgacg aacccggcct gcgcggcgaa cccggcgccc
     2881 tgcccgttca gcaggtagtt gaacccccac gaccgcccgg tccggtcgta ctcggcctgc
     2941 cagatggaag cgttgcgact tccagcaccg tcactggtcc aggagcgccc gtactggagc
     3001 tgcgcgtagt agagtcccca gacgtagcgg aagtctcccg ccaacacccg attgtgggct
     3061 cccgactgat cccggttggt gaaggtgagc ccggcgatcg aattcttgcc gaagtcgcgg
     3121 cggattctgg tgatgttgaa ccaggcgtcg gcggtatcgg tctggtcgac cgccgtgagg
     3181 tgggcgacgc cgagctggcc gaacttgccg gtgagcttgg cgccggcctt gggatttacg
     3241 atgcgtcggg tgtataccag cgtttggggc gagccgaaga gctcgatccc ttcgaggaag
     3301 aagggccgct tctccggaaa gaagagggcg aagcgctcgt tcaccgtcac ctgcccctcg
     3361 tcgctctcca cctggctgaa atcgggattg acggtggcat cgagcgcgta gctgctgaag
     3421 ccgaggcgca ggttgagtcc cgcgtccggg ttcacgtcct cgcgggtgaa ctccccgctc
     3481 aggacatccc ggcttccgtc ggcggtggcg gtcacgaacg gctgggcctc gacggttaca
     3541 ccgtgcctca tgtcgtgcag cccgccgagg gctccctcct gtcccaggaa gctggcgttg
     3601 gcccgccgga catcggtcca ggtatcggtg taaccggtcc gttggaccat gcgggtgacg
     3661 ttgaatcccc acgtctgagg cctgctaccc gggtaccgaa gactcctgaa ggggacccgg
     3721 atctcgatct catatccccg gtcggtgatc cggcccttcg agtcccaggt aaagtccgga
     3781 ttcttgtcta cgcttccagg aatgagactg ctgacttggc cggctccctc actcctcacc
     3841 ccatcggcct ggacgcccag cgggtttacc gcgaagaaga aggcccggcg gcggtcgtga
     3901 aaggtgtcca ggtcgaggac gacgtagtcg tcgttgtcga tgttgtcccg gtcggccact
     3961 gtcgcccgga tggcggctgg attccggtcg tgggcgatga tgccgaaatg gatcgcggcc
     4021 ggtgcgtacc agaccaggac ttcggtttgc tcctcggcgg ggcggccatc caccggctga
     4081 tattgccaga agccggtcag tcgggtggcc cgagaccagg ccggctcatc aagcctccca
     4141 tcgatctgga cctcactctc cagacgggga atctccgccg tgggcgagcc cttcccttcc
     4201 acgacggcgc cggagctttg gccggaggcc tgaagaagca gcaggagtgc gagcatagcc
     4261 gccgggttga tgtggagttg ggccggaggt gggccgcacg gaaaatagtc ttacccggac
     4321 gtacggggag gtggaggcgg gagtttctcc gcaaccattc atttaccacc gaggcacaga
     4381 gttggcttgc gcgatttcgt gaacgccgcg acttgatgat ccctctgtgt cctctgtgcc
     4441 tctctggtga attagtgcga ggaaggcgtt cggcgattcg agcgccttgc tcagcgaacc
     4501 ccgcgcagca gtggcacgaa gcgaaccggg accaactgcc gcgaggtaag cctccccgca
     4561 gcgtccttct gcaccacaac gagctcctgg tgagcgacct ggtcgccaac gggcatcacc
     4621 aggcgaccac caggtgcgag ctgcttaagc agcgcgggtg gaaccgagtc ggcggccgct
     4681 gtgaccagga ttgcgtcgaa gggcgcctcc gctggccagc cggcataccc atcgccgtgg
     4741 cgaacgtgta tgctcgaata gccgagtcgg gctagccggg cgcgggcatg ctttgccagc
     4801 gtcccgaaga tctcgatcgt ccagactcgg cacccggcct gcgccagaac ggcggcctgg
     4861 tagcccgacc cagtacctac ctcgagcacc cgcttgccgg ggcttggagc tatcagctgg
     4921 gtcatcagtg ccaccacggc gggctgagaa atggtctgat catggccgat cggcagcgga
     4981 aggtcttcgt aggccagaga ccgatactcc ggggggacga actcgtggcg cggcacggta
     5041 cgtattgctg ccagcgtggt cgggtcctct attccctgta gagcgagccg gactgccaag
     5101 ctttcgcgcg cctgccgcca ccagtggccg tcaccctcgc gttgggctgc ggcgggcgcg
     5161 gtgagcgcca gcgtcaagag gagtccccgc cacatatcat cccaaaatac agcacctgtg
     5221 gttcactgcc gacaccctgg cggacggccg ttttcacttt cactttttcc ccatcccttc
     5281 cgggctgatt cccagattgt tcggggcgcc gagttgacca ctgcgtcacc ctcatccaag
     5341 gaggagctca tgttgcattt cacccgattc ctcgtggcac tcttgatcct gggcgctgcc
     5401 tgccagcctc gtcccaagac cgagactggg atggcggggg ccggatcaga cgccgccgcg
     5461 gcccgcctgt ccgacgagga caaggcgagc gtacgcgcgg ttgacaccca gtgggctcga
     5521 gcggctaagg cgggcgacgg ccaagccatc gcagccctgt acgcgtcgga tgcgatcctg
     5581 cttcccccgg gggaaccgat gatcaagggc gaggcagcga aaaagtactg ggtcgacttt
     5641 gtcaacggct tttccggacc gatcgagctc aataccatgg ccgtggaagg cggcggagac
     5701 gtggcctccg cgatcggtac ctatacgatg agcctgaccc cgagaaaggc gggcgcaaaa
     5761 cctctcccca ccgaggaagg gaagtacctc gaggtgctga gacgccagga cgacgggtcg
     5821 tggaagatca tctacgatat gtggagcccg aacgccccgc cggcgccggc gaagaagtag
     5881 cggtggcagc actgcggaag cagctcatca aactgttgag ctgggaggac gcgcacgtcg
     5941 gcttcgatgc cgcggtggcc ggcctccccc cgccgttgcg cggcaccgcg cctgccggtc
     6001 tgccgtactc gccgtggcag ctggtggagc atctgcgcat cacccagcat gacattctcg
     6061 atttctgtcg caatcccggg tacaaggaaa tgtcctggcc gaaggactat tggccgccgg
     6121 gcgcctcgcc accttctgcc gccgcctggg atgcgagcat cgagcagttc cgacacgatc
     6181 gatccgccct ggaggttttg gccggtgacc cggccatcga cctcgaggcc cggatcccgc
     6241 acggcaccgg gcagacctac ctgcgtgagc tgctgctggc ggccgatcac gccgcctacc
     6301 acatcggcga gctgatcgtc gtgcgccgcc tgctcggagc ctggcgatag catggggaca
     6361 gggcggctcg aggccttcag cgacggcgtg atcgccatca tcatcaccat catggtcctg
     6421 gagctgaagg tgccgcatgg caccgagctc agctcactcc ggccgctctg gccggtgttc
     6481 ctcagctacg tgctcagctt catcaacctc ggcatctact ggaacaatca ccaccacatg
     6541 acccatgtga cggagcgggt gagcggcaag gtcctctggg ccaacctgca cttgctcttc
     6601 tggctgtcgc tgtttccctt cgtgaccggc tggatgggcg agaaccattt cgcaccggcg
     6661 ccgaccgccc tctacggggt ggtaatgctg ctggcggcga tcgcgtactg gattctgttg
     6721 cgagcgatcc tggccgtgca gggcccgcac tccttactcg cggcggcggt cgggagggac
     6781 ttcaaaggca agctgtcgcc cctgctctgc ctgatcgcga tcccctctgc cttcatccgt
     6841 gagtggattg ccggcgggct gtacgtgatc gtcgcgctca tgtggctgat ccccgaccgc
     6901 cggatagagc ggaggctgtc atcttcagct cgaggaaacg acctatgagc cgttgccctg
     6961 cgcaactgcg gcgtaagagc cgtggccgat ctcctcgagc acatcgggac ggtgcggccg
     7021 ccatcccaac aattcctggg cccgtttgcc tgacgcctgc tgatccagca ccagcgcatc
     7081 ggcataccca cccaacttct ttcgtgcctc ctccagcggt gttgccaccg tacgtccccc
     7141 ggcacccgcg ccccggcttg ctgcggcggc gatctcgctc accggccgcg acggaccgct
     7201 gacgcccagc agcagggttc ctgggggcgc actctcgagt gcgaggagat acaggtccgc
     7261 caggtcgtcc acatgtacca gcggccagcg attcttgccg gtccccacgt agcgcgcggc
     7321 gccctccttg cgggccgact cgacgaaccc cgcgggtatg ccgcctgccc gtccatagac
     7381 gatcgccggc cggatgacca ccgatcggat gccatgtgtg gcggcctcga gcacccggtc
     7441 ctcgaccttc tgtcgccacg ccaccagcgc cacggggttc ggcggcgaac tctcgtcgac
     7501 gactttcccg ccggtgtccc cgtgggacca gattccgctg gtgtagatga acggcttgtt
     7561 gctgccggcc atggcgtcga gaatggcgtc gatggccggg ccgtcgatcg atgggtcata
     7621 tgttgtggcc aggctgatcc cgccgtcggc cgcaccggca gccgagccca cactcttggg
     7681 atcggagaag tcgccccgca ccggctggat cccggcggac ctgagcttgg cggcggaggc
     7741 gtcgcttcgg gccaacgctg tgagctcgtg actagcggcc cgaagccgtt cggccacggc
     7801 agtgccaatg tatcccgtag cgccggtgag aaagacgcgc atgttagttt ccctcgggtg
     7861 gaggaggacg ctttcgagaa tcttaccact ggcggggatc cccgaggtac ggagcgcact
     7921 gtcgtgagtg cggacgaatt cagagtacgc ccggcccggc cggccgacgc ggtagaatgg
     7981 ggccggttgc gtcacgcgct ctggcctgcc gagtcagtcc acgagctcac ggctgaggcc
     8041 gaggcattct ttaccggtgg tgataacctg ctccgggcgg tgcttctggt cgaggctagt
     8101 gacggagcgc tggccggctt cgcggagctc tccttccgac catacgcaga ggactgcaag
     8161 accagcccgg tcgccttcct ggaaggatgg tacgtgattc cgtcggcgcg gcggcaagga
     8221 gcgggccggg ctctggtcgc tgccgcagag gagtgggctc gtgaccaggg ctgtcgtgag
     8281 ttcgcgtccg ataccgagct ggacaacacg gggagcgctg ccgcgcatcg ggcgctcggc
     8341 ttcgacgatg cgggcgccat tcgctgcttc cgaaagaacc tctaggctga tttgattgga
     8401 gatcgtatgg ctccgtccat ccccaagcga ttcggtgttc tcggctccgg cgaggtaggt
     8461 caggtcctcg cgaagggtct cgccactaat ggctacgacg tgcgcatcgg cacccggaca
     8521 ccaggcaagc tggcgcagtt ctccaagagc accgggattc gggaagggag ttttcaggag
     8581 gtcgccgcct gggccgaggc cgtcgtgctg gcggtgctgg gcacggccgc gctggatgcc
     8641 gtcgctctcg ccggcccgag caatctggcc gggaagctgg tgatcgatac cactaatcca
     8701 atcagcaatg agcctcccga ggatggcgtc ctccgctatt tcaccgggcc gaacgaatcc
     8761 ctgatggagc ggctccaggc tgcccatccc cgca
//
LOCUS       DASYRV010000553         4618 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3462321, whole genome shotgun sequence.
ACCESSION   DASYRV010000553 DASYRV010000000
VERSION     DASYRV010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4618
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3462321"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..894
                     /locus_tag="VGQ24_14650"
     CDS             <1..894
                     /locus_tag="VGQ24_14650"
                     /inference="COORDINATES: protein motif:HMM:NF012493.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HEV8456136.1"
                     /translation="IDEQHRFGVEQRAALIGKGAAPDVLLLTATPIPRSLALTLYGDL
                     DVSTLRQRPPGRGTVRTAVRSTGQRERVLEFIRSECANGRQAYVVLPVIEESERADLR
                     AATTMVQTLAARWPELQVGLVHGRLKGEERDGVMRRFRSGELHVLVATTVIEVGIDVP
                     NATIMLIEHPDRFGLAQLHQLRGRVGRGAEESYCILLADGPAPDRLHGFAASQDGFRI
                     AELDLQERGMGDLIGARQSGGFEVRHAQLPADADLLGQARELAIKLIEADPALQRREN
                     QRLRERAVGRYPRAVELFRVG"
     gene            complement(1430..1876)
                     /locus_tag="VGQ24_14655"
     CDS             complement(1430..1876)
                     /locus_tag="VGQ24_14655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456137.1"
                     /translation="MTRTVCALLLLLLAGGRAEAQGPVVKYGKWLLVAGSIGMNYFAV
                     QSHNRAEDAFDALEARCLANHARCTLGAQGQYTDPEIEGLYQTSLRQDRVARGWLIGG
                     ETALAGAAALFIWELTRPKGRPRNIPFEPEVRSMRGGTGVGLRAAF"
     gene            complement(1873..2925)
                     /locus_tag="VGQ24_14660"
     CDS             complement(1873..2925)
                     /locus_tag="VGQ24_14660"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEV8456138.1"
                     /translation="MSLALLLGGVNAACVNFRPPPVPVAANLAGNAPAPVWTARTGRR
                     FSSPLEVRGNTIYGGSVDRKVYAVDVQSGDVRWSARLSGMVTGGVLLVGDTVYAATSR
                     PEGRVYALRRSSGKQIWRRSTNPIGAPLALVDGVLVAQTQRGEVLGLDPASGRVRWRR
                     RAGVARVAAMPAGAGGLLVATTDSLLRLASADGKITHRAVSPGTIVSAWVPFGGGLVA
                     GTTDSQVVSIEPTALRRNWAVRVDAPVLGSPAVLGDTLFFASRMGTVYRIDPGPHPVA
                     RQIVALDWPVTTPLTVVNRSILLGGADGTIRALRTDGTEVWRVRVWRPVELGPVPLPD
                     GLVAIGGNGDLHRYRQ"
     gene            2965..4260
                     /gene="asnS"
                     /locus_tag="VGQ24_14665"
     CDS             2965..4260
                     /gene="asnS"
                     /locus_tag="VGQ24_14665"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004816 - asparagine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006421 - asparaginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HEV8456139.1"
                     /translation="MAAVEISGLRAHVGETVTVRGWVMTTRSSGKIAFAVVRDGSGYV
                     QGVLSKKEVPESTWAAFQSLTQETSVAMTGVVREESRSPGGYELAVQTLEVLGASPDY
                     PIGPKEHGTSFLFEHRHLWLRSRRQAAVARVRHEVIQGIRDFFYDRDFVLVDTPILTG
                     AIGEEAGNLFATEYFDLGKAYLAQTGQLYVEAAAAALGKVYCFGPTFRAEKSKTRRHL
                     TEFWMVEPEVAFNDSDANMRLQEEFVSYVVSRALDHRREELKELERDTSPLERVQAPF
                     PRISYSDAVTRLNQLGSDMTWGNDLGGDDETLLAREYDRPLFVYNYPKQVKAFYMKEN
                     PEDPRTVLNNDCLAPEGYGEIIGGSQREDDYERLLARIKQQGLDPQAYRWYLDLRKYG
                     TFVHSGFGLGIERTVAWICGIPHIREAIAFPRQIHRLYP"
     gene            complement(4211..>4618)
                     /locus_tag="VGQ24_14670"
     CDS             complement(4211..>4618)
                     /locus_tag="VGQ24_14670"
                     /inference="COORDINATES: protein motif:HMM:NF015758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MazG nucleotide pyrophosphohydrolase
                     domain-containing protein"
                     /protein_id="HEV8456140.1"
                     /translation="AVGFDWPDSAGPVEKVREELTEVEHELRVDPSDHKATDPDPNAP
                     GRLPSDALVEEIGDLLFAVVNLARKAGVQPGPALDRANRKFRERFEAVERLASDRGID
                     VGSAGLNVLDGLWNEVKVRDTTDVSAAGRQSPP"
BASE COUNT          851 a         1461 c         1498 g          808 t
ORIGIN      
        1 atcgatgagc agcaccggtt cggagtggag caacgcgcgg ctctgatcgg caaaggcgcc
       61 gcgcccgatg tcctgttgct caccgccacc cccattcccc ggtccctcgc cttgacactt
      121 tacggcgacc tggacgtgtc aacgctgaga cagcggcctc cggggcgcgg cacggtccgc
      181 actgcggttc gaagcacggg tcagcgcgaa cgggtactcg agttcattcg gagtgagtgt
      241 gccaatggcc ggcaagcgta tgtggtgctt ccggtgatcg aagaatccga gcgcgccgat
      301 ctccgtgcgg ccacaaccat ggtccagacc ctggcggccc ggtggcccga gctccaggtg
      361 ggactggtcc acggccggct caagggggag gagcgcgacg gggtgatgcg gcggttccgg
      421 agcggcgagc tgcacgtgct ggtcgcgacc actgtgatcg aagtggggat cgacgtgccc
      481 aacgcgacca tcatgctgat cgagcacccg gaccgcttcg ggctggcgca gctgcaccag
      541 ctccgtgggc gagtgggtcg gggagcggaa gagagctact gcattctctt ggcggatgga
      601 ccggcccccg accggctcca tgggttcgcg gcctcacagg atgggttcag gatcgcggag
      661 ctcgatctcc aggagcgggg gatgggagac ctgatcggcg cccgtcagtc aggtggattc
      721 gaggtgcgcc acgcgcagct accggccgat gccgacctgt tggggcaagc ccgtgagctg
      781 gccataaaac tgattgaggc ggacccggca ctccagcggc gggagaatca gcggctgcgt
      841 gaacgcgcgg tggggcgcta cccgcgtgcc gtggagctgt tccgggtagg ctaaggcgtg
      901 gatgggtaac gatccgagtg gcggcgtccg ggttatcgtc gatgccggca ttgtcacacc
      961 gttggaggat gattcaccac agaggcacgg aggacacaga gggattgtct cgatcccgca
     1021 ctcacgacat cgtgggcgcg gccatcgaag tgcaccgcag gctgggaccg ggtctactgg
     1081 aatcggcgta tgaaacgtgt cttggtaggg agttgtttat acggggaatc cgtttccaaa
     1141 gccaagtccc attaccactg gactatcggg ggctacgctt ggactgtggt tatcggcttg
     1201 atattgttgt agacaactcc atcattattg aggtaaaggc agtacggaaa gtgttgccgg
     1261 ttcaccgggc acaagtgctt acctacttaa agctgaccag ttgtcgcctt ggcttgttga
     1321 tcaacttcaa tgtggaggta cttcgaagcg gactctaccg gatcatcaat ggttgacgtt
     1381 acctctgtgt cctctgtgcc tctgtggtga aaaaaaccga ggcgtagaac taaaacgccg
     1441 cccgcaatcc aacacctgtc cccccccgca tgctgcgcac ctccggctcg aagggaatgt
     1501 tgcgcgggcg gcccttgggc cgagtcagct cccagatgaa cagggcagcc gcgccggcaa
     1561 gtgccgtctc accgccgatc aaccatccac gagccacccg gtcttggcgg agcgaggtct
     1621 gatatagacc ctcgatctcg ggatcggtgt actgtccctg ggcaccgagg gtacagcgag
     1681 cgtgattggc caggcaccgc gcttcgaggg catcgaaggc gtcttccgcg cgattgtggg
     1741 attgaaccgc gaagtagttc atcccaatcg agccagctac gaggagccac ttgccgtact
     1801 tgactaccgg cccctgggct tcggccctgc cgccggcgag cagcaacagg aggagggcgc
     1861 aaacggtgcg agtcactggc ggtaccggtg gagatcgccg ttgccgccga tggcgacgag
     1921 accgtccgga aggggtaccg ggccgagctc gactgggcgc cagacccgca ctcgccagac
     1981 ttcggtgccg tcggttcgca gggcccggat cgtcccgtcc gccccgccca ggagaatgct
     2041 ccgattcacc acggtaagcg gggtcgtgac aggccagtcc agcgccacaa tctggcgggc
     2101 cacaggatgg gggcccggat cgattcggta cacggtgccc atccggctcg cgaagaagag
     2161 tgtgtcacca agaaccgcgg gcgagccgag tacgggggca tcgactcgta ccgcccagtt
     2221 gcggcgcagg gccgtgggct caatcgacac cacctgtgag tcggttgtcc cggctaccag
     2281 cccgccgcca aagggcaccc atgccgacac tatggttcct ggtgaaacgg cacggtgggt
     2341 gatcttgccg tcggcgctgg ccagacggag cagggaatcg gtggtcgcga cgagcagacc
     2401 gccggctccg gccggcatcg ccgctaccct ggcgacgccg gctcgccgcc gccaccggac
     2461 acgtccactg gccggatcca gccccaggac ctcgccccgc tgagtctggg ccaccagtac
     2521 gccatccacc agtgcgaggg gggcaccaat gggattggta gaccgccgcc agatctgctt
     2581 cccgctcgaa cgtctcagcg cgtagacccg gccctcgggt cgagaggttg ccgcgtacac
     2641 agtgtctccg acgagcagca ctccgcccgt caccatcccc gagaggcgcg ccgaccatcg
     2701 cacatctccg ctttggacgt cgactgcgta cacctttcga tccacgctcc cgccataaat
     2761 ggtattgccc cgaacttcga gcggactact aaaccgccgg ccggtgcggg cagtccacac
     2821 cggcgccggc gcgttacccg ccaggttggc tgctaccggc accggaggcg gacgaaagtt
     2881 cacgcaggcc gcgttgacgc ctcccaggag cagggctaga ctcaacgctc ttcgatgcag
     2941 acctctcctc ccttcggata tggcatggcg gcagtggaaa tcagcggact ccgtgcccac
     3001 gtcggcgaaa cggtaacggt ccgcggatgg gtgatgacca cccgctcgag cggcaaaatc
     3061 gcgttcgccg tggtgcgcga cgggtcgggg tatgtgcaag gtgtcctatc gaagaaagaa
     3121 gtgccggagt ctacctgggc ggcattccag tcgctcaccc aggagaccag cgtcgcgatg
     3181 accggtgtgg ttcgggaaga atcccggtct cccggcggtt acgagctggc cgtgcaaacc
     3241 ctcgaggtgc tcggcgccag tcctgactat cccatcggtc ctaaagagca tgggacgagt
     3301 ttcctcttcg agcatagaca tctgtggctg aggagccggc gccaggcggc ggtcgcccgg
     3361 gttcgccacg aggtgatcca aggcatccgc gactttttct acgaccgcga cttcgtcctg
     3421 gtagacacgc cgattctcac cggtgcgatc ggggaggagg ccggtaacct gttcgcgacc
     3481 gagtactttg atctcgggaa ggcctacctg gctcaaaccg gccagctcta cgtcgaggcg
     3541 gcggcggcgg cactcggtaa agtctactgc ttcggcccca ccttccgggc cgagaagtcg
     3601 aagacccgtc gccatctcac cgaattctgg atggtggagc ctgaggtcgc gtttaacgac
     3661 tcggatgcca acatgcggct gcaggaagag ttcgtgagtt acgtcgtgag ccgagccctg
     3721 gatcacaggc gggaggagct caaggagctc gagcgtgata cctctccgct cgagcgggtc
     3781 caggcgccgt ttcccaggat ctcctacagt gacgcggtca cccggctcaa ccagctcggc
     3841 tccgacatga cctggggaaa cgatctcgga ggcgacgacg agacactgct ggcccgagag
     3901 tacgatcgac cgctcttcgt gtacaactat cccaagcagg tgaaagcctt ctacatgaag
     3961 gaaaacccgg aggatccgcg aaccgttctc aacaatgact gcctggctcc cgaaggatac
     4021 ggagagatca tcggagggtc ccagcgcgag gacgattacg agaggcttct ggcgcggatc
     4081 aagcagcagg gactcgatcc ccaggcctac cgctggtatc tcgatctccg gaaatacggg
     4141 accttcgtgc attccggctt cgggctgggc atcgagcgga cggtggcgtg gatctgcgga
     4201 atccctcaca tcagggaggc gattgccttc ccgcggcaga tacatcggtt gtatccctga
     4261 ccttcacctc gttccataat ccgtccagca cgttcaggcc ggccgacccc acgtcgatac
     4321 ctcggtcact ggcgagacgc tcgaccgcct cgaagcgttc ccggaatttt cgattggccc
     4381 ggtcgagtgc cgggccgggt tgaacccctg ccttgcgggc caggttgacg acggcaaaga
     4441 gcaggtcgcc gatctcctcc accagcgcat cactgggaag ccgtcccggt gcattcgggt
     4501 ccggatccgt cgccttgtgg tccgacggat cgacccgcaa ctcgtgctcg acttcggtca
     4561 gctcctcgcg gaccttctcc acaggacccg cgctgtcggg ccagtcgaag cccaccgc
//
LOCUS       DASYRV010000554         5479 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3462698, whole genome shotgun sequence.
ACCESSION   DASYRV010000554 DASYRV010000000
VERSION     DASYRV010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5479
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3462698"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..803)
                     /gene="glgP"
                     /locus_tag="VGQ24_14675"
     CDS             complement(<1..803)
                     /gene="glgP"
                     /locus_tag="VGQ24_14675"
                     /inference="COORDINATES: protein motif:HMM:TIGR02094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HEV8456141.1"
                     /translation="MNIQQSRIPYLPARIEGLAAIAMNLWWSWNREARSLFHSIDEAL
                     WHRSRHNPLELLCRVEPARIAACASDSDFLRRYDDVMERMAQESDSGQTWFAHNYPQL
                     NGRPVAYFCAEFGLHNSVPIYSGGLGVLAGDHCKSASDLGVPMVGVGLFYRKGYFDQR
                     LNLDGWQEDSDEEYDVSSTPLVPVTGANRQPWLTTVETSGRLVHVRAWRMMVGRVPIY
                     LLDTNLEVNHPEDRGLMNKLYAGGPEMRLRQEWILGVGGVRVLRAMQIDP"
     gene            947..1780
                     /locus_tag="VGQ24_14680"
     CDS             947..1780
                     /locus_tag="VGQ24_14680"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEV8456142.1"
                     /translation="MFGGLRVAAAFPGSIEGRSRLSGGDHLETIGIQLYSVRRELARD
                     FESTLARVASIGYQEVEFAGYFDRRPKAVRAILDRYRLAAPSVHVPIEVARQDWAGAL
                     AAANVIGHRYVVLPWLPPESRRTLDDFKRLAAECNRLGQEAKRAGLRFAYHNHDFEFA
                     PLDGRFPYDVLLAETDPADVALELDLFWITKGGQDPLKYFARYPGRFEMVHVKDSSGP
                     PEHRQVNVGQGTIDFGHILGRRQEAGIRHLFVEHDDPTDPLAFARASFDYLKRLELGN
                     S"
     gene            1805..2479
                     /locus_tag="VGQ24_14685"
     CDS             1805..2479
                     /locus_tag="VGQ24_14685"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HEV8456143.1"
                     /translation="MDRREVVRLLAGALAVPTLSGYSGEELLALGRRLNARITQRACG
                     PNLFDPHQRATVSAIAERLIPATDTPGAGAARVPEFIELIVAEHYPDDERTRFLSGLT
                     DVDARTRAAVGHDFVEASPVEQDRILGVLEAKAEPALTQKPPEKKPIEPSQKPEEKPA
                     EKPREALQEKPLEQPEPFWRQIKFLTVYGYYTSEIGVVRELHTVVIPARYDPCTATGV
                     RAPGGT"
     gene            2482..4164
                     /locus_tag="VGQ24_14690"
     CDS             2482..4164
                     /locus_tag="VGQ24_14690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEV8456144.1"
                     /translation="MRRSYDAIVVGSGMSGGWAAKELTERGLATLVLEAGRPIDPAKD
                     YLEHKPVYEFKFRGLGDRKENQSKHSIQSKAGPFEEQTSHFFVNDVENPYTFDPAKPF
                     YWIRGRHLGGRSIMWGRQTYRLGDLDFEANAREGIGADWPIRYADIEPWYDYVDDFIG
                     VSGERLGLAHLPDGKFLPPMPLNCAEDVVKAGIAKHFGDERLLTIGRCAILTQRHRGR
                     AACHYCGPCWRGCITRSYFNSVHVTLPAARATGRLTIRPFSVVHSVMYDERRDRATGV
                     RVIDANTREPLEFQGRVIFLCASALESTRILLNSANRRFPTGLANSSGELGRNLMDHI
                     MGGGASATIPGLEDHETFGQRPNGIYVPRFRNLRTAHPDFVRGYGFQGGGGREGWARG
                     ATIKGFGAPLKAELRRPGRWNFTFYGFGECLPRPTNYIEIDKAKVDAWGIPVLRIHCV
                     WSDNERNMLQDMSVTGAEMLEAAGAKDIKPFVQDNAPGLGIHEMGTARMGRDPKTSVL
                     DAYNRCHDVKNLFVTDGACMTSSGCQNPSITYMALTARAAAYAVDQLRKNQL"
     gene            4161..>5479
                     /locus_tag="VGQ24_14695"
     CDS             4161..>5479
                     /locus_tag="VGQ24_14695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEV8456145.1"
                     /translation="MRKEVLSSYDVCIVGSGAGGGMAAYALTRAGASVVLLEAGRMWD
                     NGKDSAMLAWPYQSPRRGAPTKERPFGEFDACIGGWEIEGEPYTVAAGSRFDWWRARM
                     LGGRTNHWGRISLRFGPDDFRGKSVDGLGDDWPIGYDDLKPFYDRVDRLVGIFGTAEG
                     LRNHPDGIFLPPPRPRCYELLVKQACGRLGITCIPARISVITRPHNGRPACHYCGQCY
                     RGCRTNSNFSSPGVLLTPALATGRLTLITNAMAREVTLDHRGLANGVSYIDKTDGTDR
                     HVRARVVVLAASACETARLLLNSKSSRFPHGVANSSGVVGKYLTDTTGTEVAGVIPRL
                     MDQVPHNEEGVGSQHIYMPWWLDNRKLDFPRGYHIEVWGGLRQPEYGFMGDMHHYPPG
                     GGYGQQLKEDYRRYYGATIWLASRGEMVPNADSYCEIDPTMLDRWGIP"
BASE COUNT          969 a         1791 c         1768 g          951 t
ORIGIN      
        1 ggatcgatct gcatcgcacg cagcacccgt actccaccca cccccaggat ccattcctgc
       61 ctcagccgca tctcgggtcc gccggcgtaa agcttgttca tcaggccgcg gtcctccggg
      121 tggttcactt ccaggttggt atccagcagg taaatcggga cccggcccac catcatgcgc
      181 caggcccgta catggaccag acgccccgaa gtctcgaccg tcgtgagcca gggttggcga
      241 ttcgctcccg tcaccggaac cagcggcgtc gagctgacgt cgtactcctc gtcactgtcc
      301 tcctgccagc cgtccaggtt aagccgctgg tcgaaatacc cctttcggta gaacaggccc
      361 acgcccacca tcggtacacc cagatcgctg gcggacttgc agtggtcgcc cgcgagcacg
      421 cccaggccac cggagtagat cggaaccgag ttgtgcaggc cgaactcggc gcagaagtaa
      481 gcgaccgggc ggccgttcaa ctgggggtag ttgtgggcga accaggtctg gccgctatcc
      541 gactcctgcg ccatccgctc catcacatcg tcgtaccgac gcagaaaatc gctatcgctg
      601 gcgcacgccg cgatccgtgc cggctccacc cggcagagca gttcgagagg gttgtgccgg
      661 ctccggtgcc agagcgcttc gtcgatagag tggaacaggc tgcgcgcctc tcggttccaa
      721 ctccaccaca agttcatcgc aatcgccgcc aacccttcga tgcgggcagg caggtagggg
      781 atgcggctct gttgaatgtt catggccaat tataagcggg gcagtcaagg tttccacgat
      841 ggcggctggc gcgactcagc gtcgggcgac atcttgggcc tactcccgac tttctggagg
      901 ctttctggat cgccgttcct tcctcgatag gttgacggcg ctcggcatgt tcggcgggct
      961 ccgtgtcgct gccgctttcc ccggctccat cgaaggccgg agccggctca gcggtggcga
     1021 ccacctggag acgatcggga ttcagctgta cagcgtgcgc cgcgagctgg cgcgggactt
     1081 cgagagcacc cttgcccggg tcgcgagtat cggataccaa gaggtggaat tcgccggcta
     1141 cttcgaccgg cggccgaaag cggtgagggc aatcctcgac cggtaccgac tcgccgcgcc
     1201 ctcggtccac gttcccatcg aggtagcacg acaggactgg gcgggcgcgc tcgctgcggc
     1261 caacgtcatc ggtcatcggt acgtcgtcct tccctggctg ccgccggaga gccggcgcac
     1321 tctcgacgat ttcaagcgtc tcgccgctga gtgcaaccgc ctgggccagg aggccaagcg
     1381 agccggtctc cgattcgcct atcacaacca tgacttcgag tttgcgccgc tggatggccg
     1441 gttcccatac gacgtgttgc tcgccgagac cgatccggcc gacgtagccc tggagctcga
     1501 cctcttctgg atcaccaaag gcggtcagga cccgctgaaa tacttcgctc gttaccccgg
     1561 ccggttcgag atggtgcatg tgaaggactc ttccggaccg ccggagcatc gccaggtcaa
     1621 tgtggggcag ggcaccatcg atttcgggca cattctgggg cgtcgccagg aggccgggat
     1681 ccgccacctc ttcgtcgagc acgacgatcc gacggacccg ctcgccttcg cccgggcgag
     1741 ctttgactat ctcaagcggc tggagctggg aaactcctga gctggaagca accggaggtt
     1801 ctccatggat agacgagagg tcgtgcggct cctcgccggt gctctggcgg tcccgacgct
     1861 ctccgggtac agtggcgaag agctgttggc gctgggccgc cgactcaatg ccaggataac
     1921 ccagcgagca tgcgggccga atctgttcga cccgcaccag cgcgccacgg tctcggccat
     1981 tgccgagcgc ctaatcccgg cgaccgacac ccccggcgct ggagcggcca gggttcccga
     2041 gttcatcgag ctgatcgtgg ccgagcacta ccccgatgat gagcggaccc gcttcctctc
     2101 agggctgacc gacgtggatg cgcgcacccg agccgccgtg gggcatgact tcgtcgaggc
     2161 ctcccctgtc gagcaggatc ggatcctcgg tgtactcgaa gcgaaggcag agccggcgct
     2221 gacgcaaaag ccgcccgaaa agaaacccat cgagcccagt cagaaaccgg aggaaaagcc
     2281 ggccgagaag ccacgcgagg cgctgcagga aaagccgctg gagcagccgg agccgttctg
     2341 gcgccagatc aaattcctga cggtttacgg ctactacact tccgagatcg gagtggttcg
     2401 ggagctccac acggtcgtga tcccggcgcg ctacgacccg tgcaccgcca ccggcgtcag
     2461 agcgccggga gggacctgac gatgcggagg agctacgacg ccatcgtagt gggctccggg
     2521 atgagcggcg gctgggcggc caaggagctt accgaacgcg gcctggccac cctggtgctc
     2581 gaggccggac ggccgatcga tcccgccaag gattatctgg agcacaagcc tgtctacgag
     2641 ttcaagttcc gcgggctggg agaccgcaag gagaatcagt cgaagcactc cattcagagc
     2701 aaggccggac ccttcgagga gcagaccagc cacttcttcg tcaatgacgt cgagaatccc
     2761 tacaccttcg atcccgccaa gccgttctac tggattcgcg gccggcatct ggggggacga
     2821 tcgatcatgt gggggcgcca gacctatcgg ctgggcgatc tcgatttcga ggccaacgcg
     2881 cgcgagggga tcggggcgga ctggccgatc cgctatgccg acatcgagcc atggtacgac
     2941 tacgtggacg atttcatcgg tgtcagtggc gagcggctcg ggctggccca cctaccggac
     3001 ggcaagttcc ttcctcccat gccgctcaac tgcgccgagg atgtggtcaa ggcagggatc
     3061 gccaagcact tcggcgacga gcggctgctg accatcggac gctgcgccat tctgacgcag
     3121 cggcaccgcg ggcgcgccgc ctgtcactac tgcggtccct gttggcgcgg gtgcatcact
     3181 cgctcgtact tcaatagcgt ccatgtcacc ctccctgccg cgcgggccac cgggcggctg
     3241 acgatccggc ccttcagcgt ggtgcacagc gtgatgtacg acgagcgtcg cgatcgggcc
     3301 acgggagtac gcgtgatcga cgccaacacc cgagagccgc tcgagtttca gggccgggtg
     3361 atcttcctct gcgcttccgc gctcgagtcc acgcggatcc tcctcaattc agccaaccgc
     3421 cggtttccca ccgggctcgc caactcgagc ggcgagctcg gtcgtaatct catggatcac
     3481 atcatgggtg gcggcgcgag cgccacgatc ccagggctcg aggaccacga aaccttcggc
     3541 cagcggccca acgggattta cgtcccccgt ttcaggaacc tgaggactgc tcatccagac
     3601 ttcgtccggg gctacggttt ccaggggggc ggcggccgcg agggttgggc ccggggcgcc
     3661 acgatcaagg gcttcggcgc gccgctgaag gccgagctcc ggcgaccggg gcggtggaac
     3721 ttcacgttct atggtttcgg cgagtgtctg cccagaccaa ccaactacat cgagatcgac
     3781 aaggcaaagg tcgacgcgtg ggggatcccc gtgctgcgca ttcactgcgt gtggagcgac
     3841 aacgagcgca acatgcttca ggatatgtcg gtcaccggcg cggaaatgct cgaggcggcg
     3901 ggcgccaagg acatcaagcc gtttgtgcag gacaatgcgc ccggactcgg aattcacgag
     3961 atgggaaccg cgcggatggg ccgtgacccg aagacctctg tactggacgc gtacaaccgg
     4021 tgtcacgatg tcaaaaacct cttcgtcacc gacggcgcct gcatgacctc ctcggggtgt
     4081 cagaatccct cgatcacgta tatggccctc accgcgcggg ccgcggccta cgccgtggat
     4141 cagctccgga agaatcagct gtgaggaagg aagtcctgtc ctcctacgac gtgtgcatag
     4201 tcgggtcggg agccggtggt ggaatggccg cctatgccct tacccgcgcg ggagcgagcg
     4261 tggtgctgct cgaggcaggt cggatgtggg ataatggaaa ggactcggcg atgctggcct
     4321 ggccctacca gtcgccccgg cggggcgcgc cgacgaaaga gcgcccgttc ggcgaattcg
     4381 acgcctgcat tggtgggtgg gagatcgagg gggagcctta caccgttgcg gccggtagcc
     4441 ggttcgactg gtggcgcgcg cgtatgctgg gggggcgcac caaccactgg ggccgcatct
     4501 cgctccgctt tggccctgac gatttccgcg gtaaaagcgt cgacggactg ggggacgact
     4561 ggcccatcgg gtacgatgac ctgaagccgt tctatgatcg cgtcgaccgc ctggtcggaa
     4621 tcttcggcac tgcggagggc ctccggaacc atccggacgg catcttcctg cccccgcctc
     4681 ggccccgctg ctacgagctc ctggtaaagc aggcctgcgg ccgcctgggt attacctgca
     4741 ttcccgcgcg gatctccgtg atcacccgcc cccataacgg ccggccggcg tgccattact
     4801 gtggacagtg ctatcggggc tgccggacga actcgaattt ctcctccccc ggcgtgctcc
     4861 ttacgccggc cctggccacc ggccggctca ccctgattac caacgccatg gcgcgggagg
     4921 tgacactgga ccaccgaggc ctcgccaatg gggtctcgta catcgacaag acagatggaa
     4981 ccgaccggca cgtgcgcgcc cgcgttgtgg tgctcgccgc cagtgcctgc gaaacagcgc
     5041 ggctcctcct taactcgaag tcgtcgcgct ttccccacgg agtcgccaac tcgagtggtg
     5101 tggtgggaaa atacctcacc gacaccaccg gtaccgaggt agccggcgta attccgcggc
     5161 tcatggatca ggtgccgcac aacgaggagg gggtcgggag tcagcatatc tacatgccgt
     5221 ggtggctgga caaccggaag ctggactttc cccgtggcta ccacatcgaa gtctggggcg
     5281 gcctgcgcca gccggagtat gggttcatgg gcgatatgca tcattacccg cccggcggcg
     5341 gttacggtca gcagctcaag gaggactatc ggcgttacta cggcgcgacc atctggcttg
     5401 ccagccgcgg cgagatggtg ccgaatgccg attcttactg cgagatcgat cctactatgc
     5461 tcgatcggtg ggggatccc
//
LOCUS       DASYRV010000555         4651 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3032198, whole genome shotgun sequence.
ACCESSION   DASYRV010000555 DASYRV010000000
VERSION     DASYRV010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4651
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3032198"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1034
                     /locus_tag="VGQ24_14700"
     CDS             <1..1034
                     /locus_tag="VGQ24_14700"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8456146.1"
                     /translation="MGFLDDSVMREIAKRPIISKEDAEIVRRAFPDAEAVSLQSGWPT
                     PTTDITYRGRTIGSVTILGVTPEYQLVQDYQFADGEPLAQPDVEERRQVVVVGSEVAE
                     KLFDGPTFATGKRIRLGGKEMEIKGVIAKKGRVLGQSFDGFALMPISTFEAIYGRRLT
                     TTISIKLPPGGHFPEAMARAEEAMRLAHRLRPTEVDDFSLDKADALVAFWTNLTGVLF
                     TLIPAVVCIGIVVGGIVIMNIMLMSVNERTREIGIRKSLGARQRDIRRQFLVEAILLS
                     SLGGIMGILGGGVLAFLISTVSPLPARVTPWSVGVALLLGAGTGIVFGVYPASRAARL
                     DPITALRQE"
     gene            1039..2277
                     /locus_tag="VGQ24_14705"
     CDS             1039..2277
                     /locus_tag="VGQ24_14705"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8456147.1"
                     /translation="MLAGNLLEGMSVALENLRTNKLRSFLTILGVVIGVATVMLMASI
                     VDGVRTQVFNALNAATPNAFYVMRFFSQTPLNPQNLPYEVRIRPVVSAEDADAIRREE
                     NIRHAGLWLQSFVRIEYGAVRSQGVWVLGADDAYMEIKGGTVAAGRFFTQGELNGAEV
                     AVLELELSRRLFGQQSPLGETVQIGGRPFRVVGLWQQPDNVFQPPGFTIGAIVPYEVA
                     KHSFRYSDTNDLFIVVLGRQGIPVTEAQDQATVALRKRRGLRPGMPNTFDFITQDQIL
                     DTMNSLTSMFFLVMTSISSVALLVGGIGVMAIMMVSVTDRTHEIGLRMACGASRREIL
                     WQFLVEAATLTLLGGMIGILIGLTSGQVLKRILNMQSAVPLWSAVLATLVSIAIGLGF
                     GLLPANRAARMDPVEALRHE"
     gene            complement(2343..3059)
                     /gene="bshB1"
                     /locus_tag="VGQ24_14710"
     CDS             complement(2343..3059)
                     /gene="bshB1"
                     /locus_tag="VGQ24_14710"
                     /inference="COORDINATES: protein motif:HMM:TIGR04001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019213 - deacetylase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis deacetylase BshB1"
                     /protein_id="HEV8456148.1"
                     /translation="MSVDLLAIAAHRDDVELTCAGLLLKAVAQGYRTAILDLTAGESG
                     TRGSAELRAQEAERAAGILGVTERRNAGLPDAHLANDNPSRKLIVEAIRHFAPRVVIL
                     PFPVGRHPDHRIASELGRDACYLAGLAKYPAEGVPHRPFKVIFSLSYREDPIKPSFLV
                     DISAHFELKLAAIKCYGSQFDGAKSAGEIFPTGQDLYSRVETQNAYYGSLIRTRYAEP
                     YFTHETVLVEDVVQLGVQSM"
     gene            3124..4302
                     /locus_tag="VGQ24_14715"
     CDS             3124..4302
                     /locus_tag="VGQ24_14715"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HEV8456149.1"
                     /translation="MPHPAIYLDHAATTPVRPEVLEAMLPFLGGATFGNPSSAHRFGR
                     AARAGLEQARREVAAALGAQAQQVVFTSGGTEADNLAVIGAALAAHHHGRPMLVAVSA
                     VEHKAVLAAAHQVTQLGGEELVLPVEPDGQLDLAALDATLTRSPAVVSVMWVNNETGV
                     RQPIEEIAGRCQRAGVLLHSDAVQAFGKLPIDLGKLPCTLLTISGHKIGAPKGIGALI
                     VRDRKAIEALIHGGGQQFGIRPGTENVAGAVALGRAATLAVEEQAAEAPRLEALRDAL
                     LERLRAAVPDLVQHGETTPRAPHILSLGVPGADSEALLMHLDLAGVAASGGSACSTGA
                     MEPSHVLTAMGVSRPLALGSIRLSLGHPTSPADLDRAAEVFPQVVDKVRKLAVVLGRA
                     "
     gene            4295..>4651
                     /gene="mnmA"
                     /locus_tag="VGQ24_14720"
     CDS             4295..>4651
                     /gene="mnmA"
                     /locus_tag="VGQ24_14720"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF015042.4"
                     /note="catalyzes a sulfuration reaction to synthesize
                     2-thiouridine at the U34 position of tRNAs; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEV8456150.1"
                     /translation="MRRGRVLVAMSGGVDSSVAAARLVEQGYDVVGATMKLFCYGDAV
                     PDRPCCSLDSINDARDVAASLGIPHYVLNLEDRFSRNVIANFVEEYSRGRTPIPCVRC
                     NSFTKFRDLLAHAEALG"
BASE COUNT          747 a         1534 c         1554 g          816 t
ORIGIN      
        1 cgatgggatt tctggacgat tccgtgatgc gggaaatcgc caagcggccg atcatttcga
       61 aggaagacgc cgagatcgtc cgccgggcct tccccgacgc ggaggccgtc tccctgcagt
      121 caggctggcc gacgccgacc acggacatta cgtatcgcgg ccggactatc gggagcgtca
      181 cgatccttgg cgtcacgccg gagtaccagc tggtccagga ctatcaattc gccgacgggg
      241 agccgctcgc gcagcccgac gtcgaggagc gccgccaggt ggtggtggtg ggcagcgagg
      301 tagcggagaa actgttcgat ggcccgacct tcgccaccgg caagcgcatc cggctcggcg
      361 gtaaggaaat ggagatcaag ggcgtgatcg ccaagaaggg ccgggtgctg gggcagtcgt
      421 tcgacggctt cgcgctgatg ccgatcagca cgttcgaggc gatctacggg cgccgtctta
      481 ccacgaccat ttcgatcaag ctgccgcccg gcggccactt cccggaggcg atggcgcgcg
      541 cagaggaggc catgcggctc gcccaccggc tccgccccac cgaggtggac gacttctccc
      601 tggacaaggc ggacgcgctg gttgccttct ggaccaacct cacgggcgtg ttgttcaccc
      661 tgattccggc ggtggtctgc atcggcatcg tcgtcggggg catcgtgatc atgaacatca
      721 tgctgatgtc ggtgaacgag cgcacccgcg aaatcggcat ccggaaatcg ctgggggcgc
      781 ggcagcgcga catccgccgc cagtttctcg tcgaggcgat cctgctctcc agtctcggcg
      841 ggatcatggg cattctggga ggcggtgtgc tggcgttcct gatttccacg gtgagcccgc
      901 tgcccgcccg cgtcacgccc tggtcggtcg gggtcgcgct gctcctcggc gccggtaccg
      961 gcatcgtttt cggggtatat cctgccagtc gcgcggcgcg actcgacccg atcaccgcac
     1021 tgcgccagga atagtcggat gctcgccggg aacctgctcg aggggatgtc ggtcgcgctg
     1081 gagaatctcc gcaccaacaa gctgcgctcc ttcctcacca ttctcggcgt ggtgatcggt
     1141 gtcgcgacgg tgatgctgat ggcttccatc gtggatgggg tgcgcaccca ggtgttcaac
     1201 gcgctcaacg cggccacccc gaacgcgttc tacgtcatgc gcttcttctc gcagactccg
     1261 ctcaacccgc agaatcttcc ctacgaggta cgcatccggc cggtggtgag cgccgaggac
     1321 gcggatgcga tccggcggga ggagaacatc cgccacgcag gcctctggct gcagtcgttc
     1381 gtgcgcatcg agtatggggc cgtccgctcc cagggggtct gggtgctcgg cgccgacgac
     1441 gcctacatgg agatcaaagg cggcacggtc gccgcgggga ggttcttcac acagggcgag
     1501 ctgaacggcg cggaagtggc cgtgctcgag ctcgagctgt cccgccgtct cttcggacaa
     1561 cagagcccgc tcggcgaaac ggtgcagatc ggcggccgcc cctttcgggt cgtgggactc
     1621 tggcaacagc ccgacaacgt cttccagcca ccggggttca cgatcggggc gatcgtgccg
     1681 tacgaagtgg cgaagcactc cttccgctac agcgacacca acgatctctt catcgtcgtg
     1741 ctcggccgcc agggaatccc ggtcaccgag gcccaggacc aggcgaccgt cgccctgcga
     1801 aagcgccgcg ggctccggcc tgggatgccg aacaccttcg atttcatcac gcaggaccag
     1861 atcctggata ccatgaactc gctgacctcg atgttcttcc tggtcatgac gtcgatttcg
     1921 agcgtcgccc tcctggtcgg cgggatcggg gtcatggcga tcatgatggt atcggtgacc
     1981 gatcggaccc acgagatcgg gctgcggatg gcctgcggcg cgagccggcg ggagatcctc
     2041 tggcaattcc tcgtggaagc tgcgactctg accctgctgg gcggaatgat cgggatattg
     2101 atcgggctca ccagcggtca ggtgctcaag cggatcctca acatgcagtc ggcggtgcca
     2161 ctctggagcg cggtcctggc gacgctcgtc tccatcgcca tcggcctggg cttcgggctg
     2221 ctccccgcga accgggcggc gcggatggat ccagtggaag cactccggca tgaatagaaa
     2281 agcgtgaaca gtgaactgtg aacggggcct gctcctccgg ttcaccgttc acagttcacg
     2341 ttttacatgc tctgcactcc gagttgcacg acgtcctcta ccagcaccgt ctcgtgggtg
     2401 aagtacggtt ccgcgtagcg ggtcctgatc agggagccgt agtaagcgtt ttgggtctcg
     2461 acccgactgt agaggtcctg ccctgtgggg aaaatctctc ccgcgctttt cgcgccatcg
     2521 aattggctgc catagcattt aatagccgcc agtttcagct cgaagtgggc gctgatgtcc
     2581 accaggaagc tcggcttgat cgggtcttcc cggtaggaga gcgaaaagat gactttgaag
     2641 ggccgatgcg gcacaccctc ggcgggatac ttggcgagcc ccgcgagata gcaggcatcc
     2701 cgccccagct cggaagcgat ccggtggtcc gggtgccgac ccaccgggaa agggaggatg
     2761 acgacgcggg gtgcaaaatg gcggatcgcc tcgacgatga gcttgcggct cgggttgtcg
     2821 ttggccagat gggcatccgg taacccggcg tttcggcgtt cggtcacccc aaggattccc
     2881 gcggcccgct cggcttcctg agcacgaagc tccgcgcttc ctcgggtgcc cgactccccc
     2941 gcggtgaggt ccagaatcgc ggtgcgatag ccctgcgcca cggccttgag gagcaggccg
     3001 gcgcaggtga gctctacatc gtcccgatgg gcggcaatcg cgaggaggtc gacggacatg
     3061 ccggaaaagt aagaggtccg ctcacttctt acctctgacc tctaaccctc ctagatttcc
     3121 gggatgccgc accccgccat ttacctcgac cacgccgcga caacgccggt ccgcccagag
     3181 gtgctcgagg ccatgctccc gtttctcggc ggcgcgacgt tcgggaaccc gtccagcgcc
     3241 caccgcttcg gccgtgccgc gcgagccggg ctcgagcagg ctcgccggga agttgctgcc
     3301 gcccttggtg cccaggccca acaggtcgta ttcacctcgg gcggcaccga ggcggacaac
     3361 ctcgcggtaa tcggtgcggc gctggcggcg caccaccacg gacgccccat gctggtcgcg
     3421 gtctccgccg tcgagcacaa ggctgtgctg gcagcggcac atcaagtcac gcagctgggc
     3481 ggcgaggagc tggtgttgcc ggtcgaaccg gacggacagt tggatctcgc tgcgctggac
     3541 gcaaccctga cccgctcgcc cgcagtagtg tcggtcatgt gggtcaacaa tgagaccggc
     3601 gtgcgccaac cgatcgagga gatcgccgga cggtgccagc gcgccggggt tctgcttcac
     3661 agcgacgcgg tgcaggcgtt cggcaagctt ccgatcgacc tcggcaagct gccctgtacc
     3721 ttgctcacca tctcgggcca caagatcggc gccccgaaag gaatcggggc gctgatcgtg
     3781 cgggaccgga aggcaatcga agcgctcatt cacggcgggg ggcaacagtt cgggatccgg
     3841 cccggcaccg agaacgtcgc tggcgcggtg gcccttggcc gcgccgcaac cctcgcggtc
     3901 gaggaacagg cggcggaggc tccccggctc gaggcgttgc gcgacgcgtt gctcgagcgg
     3961 ctgcgcgcgg cggtgcccga tctcgtccag cacggggaga ccacgccgcg cgcgccgcac
     4021 atcctgagcc tgggcgtgcc gggagccgac agcgaagcgc tgctcatgca tctggatctc
     4081 gcgggggttg ccgcctcggg cggctcggcc tgctccaccg gcgcgatgga gccatcccac
     4141 gtgctcaccg cgatgggcgt ttcgcgcccg ctggcccttg gctcgattcg gctgagcctc
     4201 ggtcatccga ccagccccgc cgacctggac cgcgcggcgg aagtgttccc gcaggtggtc
     4261 gacaaggtcc gcaagctcgc tgtggtgctg ggccgtgcgt aggggccgcg tgctcgtcgc
     4321 catgtccggc ggggtcgaca gctccgtcgc cgccgcgcga ctcgtggagc agggctacga
     4381 cgtcgtcggc gccacgatga agctcttctg ctatggcgat gcagtgcccg accgcccctg
     4441 ctgctcgctc gattcgatca acgatgcgcg cgacgtggcg gccagtctgg gcattccgca
     4501 ctatgtgctg aacctggaag atcgcttctc ccggaacgtc atcgcgaatt tcgtcgagga
     4561 gtacagccgc ggccgtacgc cgatcccctg tgtccgctgc aattccttca ccaagttccg
     4621 tgatctgctc gcccacgccg aggcgctcgg c
//
LOCUS       DASYRV010000556         7268 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_756418, whole genome shotgun sequence.
ACCESSION   DASYRV010000556 DASYRV010000000
VERSION     DASYRV010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7268
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_756418"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2213
                     /locus_tag="VGQ24_14725"
     CDS             <1..2213
                     /locus_tag="VGQ24_14725"
                     /inference="COORDINATES: protein motif:HMM:NF025141.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VIT domain-containing protein"
                     /protein_id="HEV8456151.1"
                     /translation="YLLSLAGLAHGLSALIAVFALSTFPALPAHAQGWIEIERPVDPV
                     LPPDVVRVGSEVRVTVEGRAAQIEVEERFRNAGSRVAEGSYLYPMPGEAVFTNFSLWM
                     GDQEVRGETMNAERARAIYEEIVRRRKDPALLTFAGHGLVRAQVFPIEPGDTRKVVLR
                     YSQLLTRAGDALRLRYSFGDRGATSDIRYSVTVPNAAGYGTPYSPTHRIDTRRSGERL
                     EISLADQASGQMELFLPLRQGLVGTSLVTHAPNGEDGYFMLLLAPAEAEAGAEVPRDL
                     TLVVDVSGSMSGTKLEQAKAALNQALGTLGSKDRFRVIAFSSQVRRFRDGFVSATRDN
                     LTAAREFVDRLGADGGTNIAGALEAALDHPGNGERLSMVVFMTDGLPSIGEQAPDRIA
                     EQAAGRIGRTRVFTVGIGHDVNTYLLDCLASRGHGTSEYVAPGSNVETAMGSLLSKLR
                     YPALVDLRIAETPITLSQTLPAQLPDLFYGEELVVFGRYKGHGSGTILVTGARNGKAE
                     RIPVSASFSASEPGNDFIPKLWAARQIGDLTRQIRLEGASSSLVDQVRQLGLRYGILT
                     EYTSYLVQEPAAIARPGTPVPLREDQMGGARNSAAQTGAGAFERAKASAKLADSKTLA
                     AADAAASDRLVSLSRDGAAPETRRAGGRLFIRRGQVWTDVAQVDRITVTDVAAYSRAY
                     FELVRLLPEVAPCLSVGEEILIAGRRASVRIGPSGVEIWQPGELAVLVRNFRGT"
     gene            2210..2710
                     /locus_tag="VGQ24_14730"
     CDS             2210..2710
                     /locus_tag="VGQ24_14730"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEV8456152.1"
                     /translation="MTADLTDLFEQYYGSLVRMLYRRTGDRDRAEDLAQETFARAVAA
                     PPDNPRPWLFAVALNLVREDGRRALRQGRRLELLRTDDRPEQGPENDYDRNERSAAVR
                     AALATLNERDREALLLKAEGFNYEEIAATLGLSKGAVGTTLARARRRLVEAYRSEGRG
                     KNVASR"
     gene            2694..3959
                     /locus_tag="VGQ24_14735"
     CDS             2694..3959
                     /locus_tag="VGQ24_14735"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEV8456153.1"
                     /translation="MSHLDEGTLHALLDGELDITEAREVQSHLGTCVACGSRLQEVKQ
                     FLAEADRLVGALEMPAGAAAPPSPPPPRQSAPPRRPLREPESWDETPVLLLPDNAEAL
                     ARRHWWLRTLQWAAMIAVVVGGGRALWNVVGPHGSLPPARDITTSARPVPPAVASPEE
                     AGGPERPMAQAPTRPARTPTQNRALAAKTTQEPKAAAPAALVDSAPEPADTVTDAFAD
                     SVPAEDQTLAAAGATAESVSTDSMAKDTPANNTARQEDDLATRRAAAEALAELDRQRR
                     RERAAAATAALPPPVPARAEESPAAEPPPPRTPEQRAQVYLRIGLDEAVRQLGSPVHV
                     IEGMTPEFIGLTYGRLVAGADPNRPVVRVVYVDSRGRMILLDQQRMRTGQAPGAAEGS
                     LRWSVGDVMLYLRGEPGPDVLRNLQRRVR"
     gene            complement(4007..6577)
                     /locus_tag="VGQ24_14740"
     CDS             complement(4007..6577)
                     /locus_tag="VGQ24_14740"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEV8456154.1"
                     /translation="MDLTISGAPTSGGLHGLRGQSMGESGAAHRISGSGLLARVTARV
                     PSRADWTRIGASVRGPLLTLSTAIAFDILARHNLQLSHPFVFLLLTVIYSTYSGGFRP
                     GLISAILMVLYAVHFLSTPGAILSYTPGNAYTLLGLALSVPVALALVTRLRDAAQRAR
                     GIELSRAEAERLERRLAFFAEANVTLASSLDYEVTLRNLARLIVPTLADWCAIHVASE
                     QGVLQFISGAHRDPTKDLLVRALCEYKPRQPPFGAAHRRAELGQVTDDLLQVSAEDAE
                     QLKLFRALAATMFLRAPLTARGQSVGTITLAVGPESGRSYDADDLAFAEELAARAALA
                     VDNARLYRGAQEADERYGMLFGSNPQPMWVFDAETLAFLAVNDAAVRHYGYNREEFLS
                     MTIMDLLPPEDAPGLHHGLERTGLQRGDVALAQHQRKDGTIIDLELVSHEMELDGRRA
                     RLVLATDISERTRTRAALHQSEEQLRQAQRMDAAGRLAGGVAHDFNNLLTTIRGFSDL
                     LLRDMPTDDARRKDIEQIRKAADRGAALTRQLLAFGRSQSLEPRTIELNSVVTNMEGL
                     LQRLIGADIKLVTELRPGLGDVRVDPGQLEQVLVNLVLNARDAMPAGGTLTIETGERL
                     ISGSTRGRSVKPGRYVVLAVSDSGSGMDGDTLSHVFEPFFTAQAPGSRAGLGLSIVYG
                     IVKQSGGVVRVSSEPGQGTTVKVFLPRVEGDEPVATEAPVSLRGDETVLIVEDEDGVR
                     ELLWKILTDHGHTVLEARHGRDALTVAGGYNHPIHLMVTDVVMPEMGAGELVDRLLTK
                     RPNLKVLFISGYTNDEVVRRGVTQTDSAFIQKPFAAPELMQKVRGLLDGESRVTSRES
                     "
     gene            6674..6940
                     /locus_tag="VGQ24_14745"
     CDS             6674..6940
                     /locus_tag="VGQ24_14745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456155.1"
                     /translation="MAKKRTVKKASAKKRAGAKLGSKRRTKSRAKKASSSKKRTSRAR
                     AARRTLKSVRVAGEKTWKALKSTTAQMVEGVKGTFGAEQSANGR"
BASE COUNT         1229 a         2438 c         2404 g         1197 t
ORIGIN      
        1 gttatctgct ctcgctggcc ggactcgccc acggcctttc tgccctcatc gctgtcttcg
       61 ccctctccac cttccctgcc cttcccgccc acgcccaggg ctggattgag atcgagcgac
      121 cggttgaccc ggtcttgcca cccgatgtcg tgcgagtggg ctcggaggtt cgggtgacgg
      181 tcgaggggcg ggcagcccaa atcgaagtcg aggagcgttt ccgcaatgca ggcagccgcg
      241 tcgccgaagg cagctacctc tatcccatgc ccggcgaagc ggtctttacc aacttttcgc
      301 tctggatggg agatcaggag gtccggggcg agaccatgaa tgcggagcgg gcgcgtgcga
      361 tctacgaaga gatcgttcgg cggcggaagg atcctgcctt gctcacgttc gcgggccacg
      421 gcctggttcg agcccaggtg ttccccatcg agccaggtga cacccggaag gtcgtgctcc
      481 gctacagcca gctgctgacc cgggcaggtg acgcgctacg gctccgctat tccttcggcg
      541 atcgcggggc cacctccgac atccgctaca gcgtgaccgt gcccaatgcg gcgggatacg
      601 gtacgcccta ttccccgacc catcggatcg acacgcgccg gtcaggcgag cggctcgaga
      661 tctctcttgc cgatcaggcg tccggtcaga tggagctctt tctccccctc aggcaaggac
      721 tggtgggcac cagcctggtg actcacgcgc ccaatggcga agatggctac ttcatgctgc
      781 tgctcgcgcc ggccgaggcc gaagccgggg cagaagttcc ccgagatctg accctcgtcg
      841 tggacgtgtc cggctccatg tccggtacca agctcgagca ggccaaggcc gcgctgaatc
      901 aggcgctggg cactttgggc tcgaaggatc gctttcgtgt catcgccttc tcgtctcagg
      961 tacgtcgctt ccgggacggc ttcgtttcgg ccacgcggga caacctgacc gccgcgcgag
     1021 agttcgtgga taggctcggt gccgatggtg gaaccaacat cgcgggcgcg ctggaagcgg
     1081 cactcgacca cccaggcaac ggcgagcgat tgagcatggt cgtcttcatg actgacggac
     1141 ttccttcgat cggcgagcag gcacccgacc gcatcgcgga gcaggccgcc ggcaggatcg
     1201 ggcggacccg ggtattcacg gtcgggatcg gccacgacgt gaacacatat ctgctcgatt
     1261 gcctggcatc acgcggacat ggcacttcgg agtatgtggc gccagggtcc aatgtggaga
     1321 ctgccatggg ctcgcttctc tccaagctcc gttatccggc attagtggac ctccggatcg
     1381 ccgagacgcc gattacgctg tctcagacgc tcccggctca acttcccgat ctcttctatg
     1441 gcgaggagct ggtggtgttt ggccggtata aaggacacgg ttccggcacc attctggtga
     1501 caggagcgcg aaacgggaag gcggagcgga tcccggtatc cgcttccttt tcggccagcg
     1561 agcccggtaa cgacttcatc cccaagctct gggcggcaag acagatcggg gacctcacgc
     1621 gccaaatcag gctggaaggc gcgtcgagca gcctggtaga ccaggtacgc cagcttgggc
     1681 tccgctacgg aatcctgacc gaatacacct cgtacctggt ccaggagcct gccgccattg
     1741 cccgccccgg taccccggtt ccgctgcggg aggatcagat gggcggggcc cggaactccg
     1801 cagcccagac cggtgccggc gccttcgaac gcgccaaggc cagtgccaag ttggccgatt
     1861 ccaagacctt ggctgcggcg gacgcggcgg cctcggatcg cctggtgtcg ttgtcgcggg
     1921 acggtgccgc gccggagact cgaagggccg gcggacggct gtttattcgg cggggacagg
     1981 tctggactga cgtggctcag gtcgatagga tcaccgtcac tgatgtggca gcgtacagta
     2041 gggcatattt tgagttggta cgactgttgc cggaggtcgc tccctgcctc tcggtcggcg
     2101 aggagatcct gatagccggc cggcgggcga gcgttcgaat aggtccttcg ggcgttgaga
     2161 tttggcaacc gggcgagctg gcggtcctgg tccgcaactt cagaggcaca tgacggccga
     2221 tcttaccgac ctgttcgagc agtactatgg ctctctcgtc cggatgcttt accgccggac
     2281 gggagatcgg gaccgggcag aggacctggc ccaggaaaca ttcgcccggg ccgtggcggc
     2341 gcccccggac aatccgcgtc cctggctctt tgcggtggcc ctgaacctgg tgcgggaaga
     2401 tggacggcgg gccctccgtc agggccggcg gctggaactg ctccggaccg atgaccgccc
     2461 ggaacagggt ccggagaacg actatgatcg aaacgaacgg agtgccgcgg tccgtgccgc
     2521 gctcgccacg ttgaacgagc gggaccggga ggccctcctg ctgaaggcgg agggcttcaa
     2581 ttacgaggag atcgccgcca cactgggact ctccaaaggt gccgtgggaa cgacactggc
     2641 ccgcgcgcgg cgcaggctgg tggaagctta tcggtcggaa ggacggggga agaatgtcgc
     2701 atctcgatga aggcacgctt cacgcgctgc tcgatggcga gctggatatc accgaagcac
     2761 gtgaggtcca gagccacctg ggtacctgtg tagcctgtgg ctcacgcctt caggaggtga
     2821 aacagtttct ggccgaggcc gatcgtctgg tgggcgctct cgagatgccg gccggagccg
     2881 ctgctcctcc gtcgcccccg ccgccacgtc aatctgcgcc cccccgtcgg ccactccgcg
     2941 agccggagag ctgggacgaa acgccggtcc ttctgctccc ggacaacgcc gaggcgctcg
     3001 cccgccggca ctggtggctc cgcactctcc agtgggcggc gatgatcgcg gtcgtggtcg
     3061 gtggcgggcg cgcgctctgg aatgtcgttg gaccgcacgg ttccctgcct ccggctcgcg
     3121 atatcaccac gtctgctcgt ccggttccgc cggccgtagc cagtccggag gaggccggag
     3181 gccccgagcg gccgatggcc caggcaccga ctcgcccggc tcgcacccct acccagaacc
     3241 gcgccttggc cgcgaagacc acccaggaac caaaggcggc ggccccagcg gctttggttg
     3301 acagcgcgcc agagccggcc gacaccgtaa ccgatgcgtt cgccgactcg gtgccggccg
     3361 aagaccagac gctggctgcc gccggcgcta cggccgagtc ggtctcgacg gattcaatgg
     3421 ccaaggatac gccggcaaac aatacagccc ggcaagagga tgatctggcc acccggcggg
     3481 ctgcggcgga ggcgctggct gagctggacc gccagcgtcg gcgggagcgg gccgcggcag
     3541 ccacggcggc attgccacca ccggtgcctg cccgagccga ggaatcaccc gccgcagagc
     3601 cgccgccgcc ccgcacaccg gagcagcgag cgcaggtcta cctgcgcatt ggtctcgatg
     3661 aggccgtcag gcagctcggc agccccgtac atgtaatcga agggatgacg ccggaattca
     3721 tcggtctgac ctacggccgc cttgtcgccg gcgccgaccc caaccggccg gtggtgcggg
     3781 tggtgtatgt ggactcgcgt ggccgaatga tcctgctgga tcagcagcgg atgcgcactg
     3841 gccaggctcc cggcgccgcc gaaggaagcc tccgttggtc cgttggcgat gtgatgcttt
     3901 atctacgggg agagccgggg ccggacgtac tcaggaatct gcagcgccgg gtgcggtgag
     3961 tcgcgagtca cgagtcatgg gtcgcgacca aagcctccag taagtcctac gactcgcgac
     4021 tcgtgactcg cgactctccg tcgagcagcc cccgcacctt ctgcatcagc tccggcgccg
     4081 caaacggctt ctgaatgaag gcggagtcgg tttgggtcac cccgcggcga accacttcgt
     4141 cgttggtgta acccgagatg aacagcacct tcaggttggg gcgcttggtg agcaaccggt
     4201 ccaccagctc gcctgctccc atctccggca tgaccacgtc ggtcaccatc agatgaatcg
     4261 gatggttgta accgccggcc acggttaacg catcccgacc atgccgagcc tcgagcaccg
     4321 tgtgcccgtg gtcggtcagg atcttccata gcagctcgcg gactccgtct tcatcctcca
     4381 cgatcagcac ggtctcgtcg cctcgcagtg acacgggtgc ctcggtcgcg accggctcgt
     4441 ccccttccac ccttggaagg aagaccttga cggtggtgcc ctgacccggc tcgctcgaca
     4501 cgcgcaccac acccccgctc tgcttcacga tgccatagac gatcgacagc cccagcccgg
     4561 cgcggctgcc gggcgcctgg gcggtgaaga acggctcgaa gacatgagag agcgtatcgc
     4621 cgtccatgcc gctcccactg tcgctcaccg cgagcacgac gtatcggccc ggcttcaccg
     4681 agcgcccgcg agtggagccg ctgatcagac gctcccccgt ctcgatggtg agggtcccgc
     4741 cggccggcat cgcgtcccgt gcgttgagta ccagattcac caggacctgc tccagctgac
     4801 ccggatccac cctcacatct cccaggccgg gacggagctc agtcacgagt ttgatgtccg
     4861 cgccgatgag ccgctgcagc agcccttcca tgttcgtgac gacgctgttg agctcgatgg
     4921 tacgcggctc gagcgactgg gaccggccaa aggccaggag ctggcgggtc agggcggcac
     4981 cccggtcggc cgccttccgg atctgctcga tatccttgcg ccgggcgtcg tcggtaggca
     5041 tatcgcgcag gaggaggtcg ctgaagccgc ggatggtcgt caacagattg ttgaagtcgt
     5101 gggccacccc cccggccagc cggcccgctg cgtccatccg ctgcgcctga cggagctgct
     5161 cctcgctctg gtgcagcgcc gcgcgagtgc gggtacgctc gctgatgtcg gtcgccagca
     5221 ccagtcgggc gcgccgtccg tccagctcca tctcatgaga gaccagctcc aggtcgatga
     5281 tggtgccgtc tttccgctgg tgctgggcca gcgcgacgtc ccctcgctgc agaccggtcc
     5341 gctccagccc gtggtgcaag ccgggcgcat cctcgggcgg aagcaggtcc atgatggtca
     5401 tcgagagaaa ttcttcccgg ttgtacccgt agtgccgtac cgccgcgtcg ttcaccgcaa
     5461 ggaacgccag ggtctccgcg tcgaagaccc acattggctg ggggttgctg ccgaacagca
     5521 tgccgtagcg ctcgtccgcc tcctgcgcgc ctcgatacaa gcgggcgtta tccacggcga
     5581 gggccgcccg cgccgccaac tcctccgcga acgccagatc gtcggcatcg tagctccggc
     5641 ccgactccgg cccgacggcc agcgtgatcg tgccgaccga ttggcctcgg gcggtgagag
     5701 gcgcccggag aaacatggtg gccgcgagcg cccgaaagag cttgagctgt tcggcgtctt
     5761 ccgcactcac ctgtagcagg tcgtccgtca cctggcccag ctcggcccgg cggtgtgccg
     5821 ctccgaaggg cggctggcgg ggcttgtact cgcagagcgc gcggaccaac agatccttgg
     5881 tcggatcccg gtgcgcgccc gagatgaact ggagtacccc ctgctcactg gcgacgtgta
     5941 tggcgcacca gtccgcgagc gtcggaacga tgaggcgggc gaggttccgc agagtgacct
     6001 cgtagtccaa cgacgaggcc agggtgacgt tggcctcggc aaagaacgcc agccttcgct
     6061 ccagtcgttc cgcctcagcg cgggagagct cgatgccgcg ggcacgctgc gccgcgtccc
     6121 ggagtcgcgt caccaacgcc agcgccaccg gcaccgagag cgccaatccg agcagggtgt
     6181 aggcgttgcc gggcgtatag ctcaggatgg cccccggcgt ggagaggaag tgaaccgcgt
     6241 acagaaccat caggatcgcg ctgatgagcc ccggccggaa cccaccacta taggtcgagt
     6301 agataacggt cagcaggaga aacacgaatg gatgggagag ctggagattg tgccgggcca
     6361 gaatgtcgaa ggcgatggcg gtgctgagcg tcaggagggg acccctgaca ctcgcgccaa
     6421 tgcgggtcca gtcggcacgc gacggcaccc gcgcggtgac acgcgcgagg aggccggacc
     6481 cgctgatgcg gtgcgctgcc ccgctttcgc ccattgattg cccccgaagc ccgtgcagtc
     6541 cgccggaagt cggcgcgccg gagatggtaa ggtccaatgt aaggtcgtat aatgtctgtg
     6601 acaggcccca cacctgtggg atccggcaat cccggtccgc gccgccatgt cctccatcac
     6661 ccgagagatc cttatggcaa agaagcgcac ggtgaagaaa gcatccgcca agaagcgcgc
     6721 tggagcgaag ctcggttcca agcggcgcac caagagcaga gccaagaagg cgagcagctc
     6781 caagaagcga accagtcgtg cccgcgcggc tcggcggacg ctcaagagcg tgcgagtcgc
     6841 cggcgagaag acctggaagg ccctgaagtc caccaccgcc cagatggtcg aaggggtgaa
     6901 agggacgttt ggagcggaac agagcgcgaa cggccgctag cccgaagagc cccggtgctc
     6961 cgccagtctc gcggagcact tgccggcccg gggccacctc cggccgaaga tccttgcgac
     7021 cccgccaatc gggcgataag ctatcccccg atcctcctag ctaccgcagc ccccgcagac
     7081 tgccggccat tttggaaagg atcctcatcc atggacctgt gtcgtcggct acgccacccc
     7141 gctccttgcc ttctgctcgc ctctctgctg tttgcggtac caaccatcct tcgagcccag
     7201 gcgcaggcca ccaccggagt catccggggc acggtcgcgg attcatcggg cacgccgctg
     7261 gcgggggc
//
LOCUS       DASYRV010000557         2970 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_756745, whole genome shotgun sequence.
ACCESSION   DASYRV010000557 DASYRV010000000
VERSION     DASYRV010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2970
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_756745"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..817)
                     /locus_tag="VGQ24_14750"
     CDS             complement(<1..817)
                     /locus_tag="VGQ24_14750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HEV8456156.1"
                     /translation="MTSVAPSPVTLRRRTREARLSELEPLLARRILVLDGAMGTMIQS
                     YQLGEKDYRGERFAGWPRDLRGNNDLLSLTQPGIIRAIHKAYLEAGADVLETNSFNSS
                     AISMADYGMEELVYELNQASARLARDVADEFETRDPDTPRYVAGVLGPTNRTASLSPD
                     VNDPGFRNVSFDDLVATYSEAVRGLLDGGADLLLVETIFDTLNAKAALFAIESHFDTT
                     DIRVPVMISGTITDASGRTLSGQTTEAFWNSVAHSRPLSVGLNCALGARALRQY"
     regulatory      complement(853..927)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00521"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00521"
     gene            complement(1002..1292)
                     /locus_tag="VGQ24_14755"
     CDS             complement(1002..1292)
                     /locus_tag="VGQ24_14755"
                     /inference="COORDINATES: protein motif:HMM:NF014633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 family protein"
                     /protein_id="HEV8456157.1"
                     /translation="MVNQIQQVTGGVRVRVRVVPRASRTEVVGLQGDALRIRLTAAPV
                     DGAANEALVSFLAERVVVPRSSVRLVSGETSRSKVVLIAGANVEQVRARLGV"
     gene            complement(1348..1923)
                     /locus_tag="VGQ24_14760"
     CDS             complement(1348..1923)
                     /locus_tag="VGQ24_14760"
                     /inference="COORDINATES: protein motif:HMM:NF014389.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HEV8456158.1"
                     /translation="MFLDALDIAVRSIVLFALAFAAIVALTHWAVRSRRIDPFGAWPR
                     LVRRVSDPILLPLERRIIRAGGGPQNAPLWLLGLVIGCGLLLLSLTQWLIGTAAGLVL
                     LAHGGPRVWLRVLLSAVFTILMAAILIRVIASWLGIGEYRKWMRPVYALTNWLIDPIR
                     RILPPVGIFDFSPLVAWLVLYVVRGFVLGLL"
     gene            complement(1926..2369)
                     /locus_tag="VGQ24_14765"
     CDS             complement(1926..2369)
                     /locus_tag="VGQ24_14765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456159.1"
                     /translation="MSGRASWLVILVMVFAGLACNDRGGSRAHAPRDVSNLPPDERDA
                     HVLGLEIFELVDRAIDYRGSHRGRPGANLRQMGIESLTTNTVRRVVNVQREPVVTVAF
                     RQPAGREIVSCRGDSQVLEQAAVHGHFTIMCTASSGAQRPMEVGE"
     gene            complement(2366..>2970)
                     /locus_tag="VGQ24_14770"
     CDS             complement(2366..>2970)
                     /locus_tag="VGQ24_14770"
                     /EC_number="1.14.19.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045300 - acyl-[acyl-carrier-protein]
                     desaturase activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-ACP desaturase"
                     /protein_id="HEV8456160.1"
                     /translation="DTRILQQRKLEEMQFEYLRAGFHPEWDRDPYRVFAYTTVQERAT
                     QFSHSETGKIVAEYEPRLGAILSQVAKEEARHYTFYRTVFEEILKRDPDQALHSASFI
                     LPAIDMPGVTMPGFKDLADVIRRAGIYGPRDYLRIVQEQIRYWKIESLEGLNELGRKA
                     QEKILGIPARLKRIAEYMESRTKSKTFSFEVVFNREFAVE"
BASE COUNT          554 a          956 c          956 g          504 t
ORIGIN      
        1 catactgtcg cagcgccctg gctccgaggg cacagttgag tcccacgctc aacgggcggc
       61 tgtgtgccac cgagttccag aacgcctcgg tggtctggcc ggatagggtc cggccgctcg
      121 catccgtgat ggtgccggag atcatgaccg gcacccgaat gtccgtggta tcgaagtggg
      181 attcgatggc gaagagcgcg gccttggcgt tcagagtgtc gaagatggtc tcgaccagga
      241 gcagatcggc tccgccgtca agcagccctc gcaccgcctc ggaataggtc gcgaccagat
      301 cgtcgaagga aacgttccgg aagccggggt cgttcacgtc gggcgagagg gacgcggtgc
      361 ggttggtcgg tcccaacacc ccggccacat aacggggggt gtcaggatcc cgggtctcga
      421 actcgtcggc cacatcgcgg gccagccggg ccgacgcctg attcagctca tagaccagct
      481 cctccattcc gtagtcggcc atggagatcg cgctggaatt gaacgagttc gtctccagca
      541 cgtcggcccc ggcttcgagg tacgccttat gaatggcacg gatgatcccc ggctgcgtca
      601 gggagaggag atcgttgttt cccctgagat cgcgtggcca gccggcgaat cgctcccccc
      661 ggtagtcctt ctccccgagc tggtagctct gaatcatcgt ccccatggcc ccgtcgagca
      721 ccagtatccg gcgcgccagg agcggctcca gctcgctgag ccgggcctct ctggttcggc
      781 ggcgcagtgt aacaggactg ggagcgactg aggtcaccgg cgatctccga atatgaaaaa
      841 accctggggc caaaacgcct cagggagagc gttttagcag tttgtttaac gtggccgcaa
      901 tcagcgcaaa tcgccacggg atcggttgtt acagcatctt gaagctaatc cgagatcagc
      961 ggtcgagcaa gtcgcgagtc gcgagtcacg agtcggcccc atcacacccc caacctggcc
     1021 cgcacctgct ccacgttggc gcccgcgatc agcacaacct tggaacggct tgtttcgccg
     1081 gacacgagac gcaccgatga gcggggaact acgacacgtt cggcgagaaa gctgaccagc
     1141 gcttcgttgg ctgctccatc caccggagcc gcggtgagcc gaatgcgcag cgcgtcaccc
     1201 tgaaggccga ccacctcggt gcgcgaggcg cggggaacga ccctgactcg gacgcggacc
     1261 ccgccggtta cctgctggat ctggttcacc attcgagatc ttgttgtcgt cccgactcgc
     1321 gactcgtgac tcgcgactcg cgcctcccta caacagcccc agcacgaacc cccgtaccac
     1381 gtacagcacc agccaggcca ccagcgggct gaaatcgaag atccccactg ggggaaggat
     1441 tcgccggatc ggatcgatca gccagttggt gagcgcatac accggccgca tccacttgcg
     1501 gtactcaccg atcccgagcc aggaggcgat cactcggatg aggatcgcgg ccatgaggat
     1561 ggtaaagaca gcactcagca ggacccgcag ccagacgcgg ggcccgccgt gggcaagcag
     1621 gacgaggccg gccgccgtgc cgatcagcca ctgggtcagg ctcagcagca gaagcccgca
     1681 accaatgacg aggccgagga gccatagcgg cgcgttctgg gggcctccgc cggcccggat
     1741 gatccggcgc tccaaaggga ggagtatggg gtcgcttacc cggcggacca gccgaggcca
     1801 ggcgccgaat ggatcgatgc ggcggctacg aaccgcccag tgggtgaggg ctacgatcgc
     1861 cgcaaacgca agagcgaaga gaactatgct gcggacagca atgtcgagcg cgtcgaggaa
     1921 cacctctact cgcccacctc catcgggcgt tgggcaccgg agctggcggt gcacatgatc
     1981 gtgaagtggc cgtggaccgc tgcctgctcc aggacctggc tatcaccccg gcaggagacg
     2041 atctcgcgac cggctggctg gcgaaaggct accgtcacca ccggctcgcg ttgcacgttc
     2101 accacccggc ggaccgtgtt cgtcgtgaga ctctcgatgc ccatttgccg gaggttggcg
     2161 ccgggacggc cgcggtggga gccccggtag tcgatggcgc gatcgaccag ctcgaagatc
     2221 tcgagcccga gcacgtgggc atcacgctca tccgggggaa ggttactgac gtcgcgggga
     2281 gcatgagcgc gcgagccgcc ccggtcgtta caggccagcc cagcgaagac catcaccaga
     2341 atgaccagcc aggaagcccg gccgctcatt ccaccgcgaa ttcgcggttg aacacgacct
     2401 cgaagctgaa ggtcttgctc ttggtcctgc tttccatgta ctcggcaatg cgcttgaggc
     2461 gagctggaat gcccaggatt ttctcttgcg cctttcgtcc cagctcgttc agcccttcga
     2521 ggctctcgat cttccagtag cggatctgtt cctgaacgat ccggagatag tcccggggac
     2581 cgtagatccc ggcgcggcgg atgacgtcgg ccagatcctt gaacccaggc atggtgacgc
     2641 ccggcatgtc gatggcgggg agaataaacg aggcggagtg cagcgcctga tccggatccc
     2701 gcttgaggat ctcctcgaac acggtccggt agaaggtgta gtggcgcgcc tcttccttgg
     2761 cgacctggct caggatcgcg ccgagccggg gctcatactc tgccacgatc ttcccggttt
     2821 cgctgtggga gaactgggtg gctcgttcct gcaccgtcgt gtaggcgaac acccggtacg
     2881 ggtcccggtc ccactcgggg tggaacccgg ctcgcaggta ctcgaactgc atttcttcaa
     2941 gctttcgctg ctgcaggatg cgggtgtccc
//
LOCUS       DASYRV010000558        11928 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2630898, whole genome shotgun sequence.
ACCESSION   DASYRV010000558 DASYRV010000000
VERSION     DASYRV010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11928
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2630898"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1318
                     /locus_tag="VGQ24_14775"
     CDS             <1..1318
                     /locus_tag="VGQ24_14775"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HEV8456161.1"
                     /translation="LFVLAGDALSPSLASKFYRGRQMVEALNAAKLDYATFGNHEFDF
                     PLDTLLARIGESKFKWISSNCTLASGEPLPKVLPWDTLRVSGHKVGIFGLTLQGPYPA
                     YVRCSNPDTAAHRVIQTLTDEGADLIVGVTHQTMAADRELLGREPRLDLILGGHEHEA
                     QDSVISNRHVVKADANGRSAQFVTVWGGKGKWRQATGLVRIDPRLPSDTAVARVIESW
                     RDSLERQLGPVREVGRTSTTIDPSSSGSRRRESLLGDLVTDAIRSGTGADVALLNAGA
                     LRLDDAIRPGPITNHQLEAVFPFADQTRVVTFPLSGAGVRRILEHGVSRGILGSGGFL
                     QVSGVAFTFDPNRPSGNRILGEIRRSQGAVLRPRDTVVVAFAAYTACDGGDGYKVPEA
                     MPACGRREAAPRALDLLTRYITDSLKGRIDPPRGSRVVEAGNTNPG"
     gene            1502..2836
                     /locus_tag="VGQ24_14780"
     CDS             1502..2836
                     /locus_tag="VGQ24_14780"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEV8456162.1"
                     /translation="MGLTPYPSLATLPSAFATACRLSRTEGELFERCRIALVRRFQSE
                     RIWFTLTSPTESLPRVGPAAGFEDGVEVARLGSGQTEVVIHADPLVAEEMRPVAMSLA
                     LGLSVVLELRSILLERQAALDDAVFQLRALRQVARLLSSVHSTEETEQLILDFMAEVF
                     FAWWACLYRPEGETYMPTVFRSLNDRLRPAPIDRTALDEALPPGSTATGADDVSVAEL
                     VGPGAELVVPLDAGAERMAMLVLGSRISDKLYGRAESELAGTLSFAAAIALKNSELVE
                     QLHSAATTDELTGLCNRRALEDRLAAEISRSLRHQLHTSVLLLDLDRFKVVNDTMGHA
                     AGDRLLVQVGQILRKQCRALDVVGRLGGDEFLVILPMTKPAEAKVFVARVQASLREIE
                     KTNPEFGACTLSMGIAESPHHGTTVSSVLAAADNALYRAKRGGRNTVEVAEA"
     gene            2837..3388
                     /locus_tag="VGQ24_14785"
     CDS             2837..3388
                     /locus_tag="VGQ24_14785"
                     /inference="COORDINATES: protein motif:HMM:NF018984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CGNR zinc finger domain-containing protein"
                     /protein_id="HEV8456163.1"
                     /translation="MTMTEPEFILLGDALWLDFINTARGRVPTSPDLLPDEAALLRWS
                     AAQSIHLNGGPPPLPLVLQLRERLTALAEALHAGLQPPAASIAAINEQLAQGGGCHQL
                     TRISGEWQLRFAPEQSPAVLQAIAQSAAASLADSLRFVRRCAGEGCSLFFSDDSPNQS
                     RRWCSVAVCGRQMKVERRRGLLR"
     gene            3340..5136
                     /locus_tag="VGQ24_14790"
     CDS             3340..5136
                     /locus_tag="VGQ24_14790"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEV8456164.1"
                     /translation="MRPPDEGRAAARTPALTSGIEPLEYFRRTQAALGDRYRLQRTVA
                     TTQELALFEAWDQVLKRRVSLRVDLDPATRGWFLREAEALGRLDHPAIRHVYDAGVLG
                     NLAYRVGNWIEGESLQAALRRGPRPIPEVHTLARDLLGALEHAHAHVIIVRRVVPASL
                     LLSTAGRGTVTDLRFCSYTLSAIPPGTIPPEPAYMAPEIREGATGDATSDVYTAGALL
                     YVAITGQAPPLDPNQLRRPTELRPACPRAIERIVMRAMQPAPDDRYLTAAEMLEDFAS
                     DAGTFETPLVPVSQGPLADVEDKARWEKRLRRALGDDYELLGLLGTGGFGRVYRVRDL
                     RLEREVALKVLQPLLTRDPEVVERFRREAQLAAGLSHPNIVNIYDIGGRSGLLWYTME
                     LIEGPSLAQLVERDGPLPLDRVLRLLREALSALAHAHGSGLVHRDIKPENMLIDLTGS
                     LQITDFGLALAIRGKYAGASSQSGTPQFASPEQLLGERVDQRSDLYSLAAVAYYALLG
                     RPPFPGSTVEQVLAKQTTNQFPTSRGQRDDVSEALERVLDHALSADVEERYSSAAEFL
                     QAVNHAAGDSGREPVADWARAAARWLRGSPLD"
     gene            5338..5550
                     /locus_tag="VGQ24_14795"
     CDS             5338..5550
                     /locus_tag="VGQ24_14795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004094893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HEV8456165.1"
                     /translation="MARTIGTVKWFNDAKGFGFITPENGDKDCFVHHTAIKAEGFRSL
                     SEGDRVEFDIVQGAKGPAAENVTKVK"
     gene            complement(5667..5885)
                     /gene="infA"
                     /locus_tag="VGQ24_14800"
     CDS             complement(5667..5885)
                     /gene="infA"
                     /locus_tag="VGQ24_14800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012039277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEV8456166.1"
                     /translation="MAKEEGIEMEGVVTEVLPDRNYRVMLENGHEILAYAAGKMSKFK
                     IRVLEGDRVSVVLSPYDLTRGRVIYRHK"
     gene            complement(5975..7684)
                     /locus_tag="VGQ24_14805"
     CDS             complement(5975..7684)
                     /locus_tag="VGQ24_14805"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HEV8456167.1"
                     /translation="MTVSVLPPSPSAFAKASWDDVAPYFDDLAGRPLEPSTIEAWLVE
                     WSRLEELVTEAAARAMIAYTIDTSDREKEADHLRFSTEVLPRMEERSVELARRLVESG
                     HSTPELATTLTRFRTQIEIFRDENVPIFAELEEHSARYQRITGSIMVEWEGVERPLPQ
                     LQPYLKSPDRAVRERAFRAASLPYVERRDELATLFDRMYQLRMRAARNAGFANFRDYI
                     FPAKFRFDYTPADCERFHEAIEQTVAPAVERVMQARRQRLGLDLLRPWDLAVDPYREK
                     PLRPFSGASELVGKAQRVFERIDPLLGREFQTMIDEGLLDLESRKGKAPGGYCETLHF
                     HGRPFIFMNAVGLVDDVMTLMHEAGHAFHAFAAHRLPLIWQRHPGSEAAELASMSMEL
                     LATPHLTLPVGYFTAQDARSAWLEHLEDILISLVHIASVDAFQTWIYTNEQGGNADAR
                     DAAWLRIRSRFERGVDWSGLERERVARWHRQLHIFMYPFYYIEYGIAQLGAVQVWRNS
                     LEDPIRAVARYREALSLGAVQPLPEIYRTAGARLTFDVDSIAELVQLVESHIDRARSE
                     LRS"
     gene            complement(7778..9676)
                     /locus_tag="VGQ24_14810"
     CDS             complement(7778..9676)
                     /locus_tag="VGQ24_14810"
                     /inference="COORDINATES: protein motif:HMM:NF021606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2339 domain-containing protein"
                     /protein_id="HEV8456168.1"
                     /translation="MSEEDRIQRLEERVARLEELAGQRGSGAAGQARVHTERRTVDAP
                     QAAGSSAIGTAPPPRRPAAPLLSSEQWIGQRVLLAIGVVALILAAGYLLRLSFDRGWI
                     SPIMRCIGGVCAGAIVGAIGWRLQPRYRTYGAALIGCGAAIIYLSVWAAARLYEVLPP
                     TTGILGLAMVSVSLAMIAYAIDVEALGTTAALGAFFAPLLLGRDYANADLLLLYLASM
                     AAGLGLVAARRRWRLTMFVVAVSFFGVAYTGAAERGTPWAVLLYGVLGGTAGIHVGLR
                     ERWWESRLLSFSGGWTFLAAASDRLHHPWAVLLAGLVLAAPVWWYALRSTRILPVQLP
                     TGSVTPGWSLGEALYFFLTPVLLGWAVHGLDPGWFNARPGAVALLVALPYLIAGYQRP
                     RPAFALVGAAAAGIAAWQHWDGVGRVWALLSLTLLWAALDHLLTREDGRWFALGTLWA
                     ALNQLFTGALDGRTAADSAFVGSWAFALWGTVAVTLGLAAGLWRRVGAASAAPLVRGG
                     LWALGGAMVLFGATGEIQRYFELKTLSVQTASLASGLAVSAWWLVFAAALVGVGFRRA
                     LKPARIAGLGVAGLAVVKVLLFDLSSLDALYRVGSVFILGLVFLLLAYLYHRQGRVVG
                     GERQESVT"
     gene            complement(9676..10905)
                     /locus_tag="VGQ24_14815"
     CDS             complement(9676..10905)
                     /locus_tag="VGQ24_14815"
                     /inference="COORDINATES: protein motif:HMM:NF024241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEV8456169.1"
                     /translation="MNRSASDSGSQFRRLAVLIAVNFVDMIGFMIVLPLLPFYALKLQ
                     ATPETIGRLIASFSVAQLLAAPIWGRVSDRYGRRPALLIGLSASAMAYVVFGLATSVW
                     LLFLSRLVQGAGGGTTGVAQAYVADTVKPADRARALGWLSAATSAGVMVGPAIGSFAA
                     HFGQAAPGMIAAALCLINVFFAWKWLPESYKEPAPVSTRARKPIWHPAWMALRHPATA
                     IGRLLWIYGVGMLAFASMTSVLALYLGAEFSIDETTIGYVFLYVGVLSFVMRSLLLGP
                     IVDRIGETWAMRIGTVLLVLGLALYPLPRDLWTLGLVIPLVPIGTALLFPATTSLMSR
                     YSDPGELGTTMGVAQTFAGLARVLAPILATITFQRLGHGWPFYTAGVLVALVGIMAFQ
                     VDVHPRAAKRAAEGAEA"
     gene            complement(10902..>11928)
                     /locus_tag="VGQ24_14820"
     CDS             complement(10902..>11928)
                     /locus_tag="VGQ24_14820"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEV8456170.1"
                     /translation="LASFSAPYIFGGGFRVMTTQIVATRLNGDDQLAMVETISLTLIA
                     LLALWLLRGTAAFESPAGGRKGVAPALLPVKRPAVRLIVGVVGWGLALLLLLPHLTLL
                     LVSFVPVGTWTTEPVPPAYTWRNYLTLIEDPVRARPLFNSLWLASAATIAAVSIAVAA
                     GVVSVRRRARFGRTIEGLLALPWAVPGTVFAIALATAFSVHAPLAGRFILVGTLWLLP
                     FAYLVRNLPITSRAILAGFRALDPSLDEAAATLGAGRWRTLRRVTLPLLRPAIVAGAS
                     LAFVTAFGDFVTSIMLYTYDTRPISLEILSSLRQSDVGVAAAYGVVLMAISAAVFALG
                     ADRGGTG"
BASE COUNT         2168 a         3961 c         3965 g         1834 t
ORIGIN      
        1 cctcttcgtg ctggccggcg acgcgctgag cccgagccta gccagcaagt tctaccgggg
       61 ccgacagatg gtggaggcgc tgaacgcggc caagctcgac tatgccacct tcggcaacca
      121 cgagttcgac ttcccgctcg ataccctcct tgcccggatc ggcgagtcca agttcaagtg
      181 gatctcgagc aactgcactc tggccagcgg agaaccgctg ccgaaggtcc tgccctggga
      241 caccctgcgc gtctcgggtc ataaggttgg gatcttcggc ctcaccctcc agggtcccta
      301 tcccgcctac gtgcgctgct ccaatccgga tacggcggcg caccgggtca tccaaacgct
      361 caccgacgaa ggcgccgatc tgatcgtcgg cgtgactcac cagacgatgg cggcggaccg
      421 cgagctgctc ggacgggagc cgcgactcga cctcattctg ggaggtcatg aacacgaggc
      481 gcaggactcc gtcatttcga accggcacgt cgtcaaggcg gacgcgaacg gtagaagcgc
      541 ccaattcgtg accgtctggg gcggaaaggg caaatggcgg caggcgacag ggctggtccg
      601 catcgacccg cgattgccct ccgacacggc ggtagcgcgg gtgatcgagt cctggagaga
      661 tagtctcgag cggcaattgg ggccggtgcg cgaggtgggc cgcaccagca cgaccattga
      721 cccatcgagc agcgggtcgc ggcggcgaga gtcgttgctc ggcgacctgg tgacggacgc
      781 catacggtct ggaaccgggg ccgacgtcgc cctgctcaac gcaggcgcgc tgcgcctgga
      841 cgacgccatc aggccgggcc ctatcaccaa ccaccagctc gaggcggtct ttcccttcgc
      901 cgatcagacc cgagtcgtca ccttcccgct gagcggtgcc ggggtaagac ggattctgga
      961 gcacggggtg tcccgcggga ttctgggcag cggcggcttt cttcaggtct ccggtgtggc
     1021 attcaccttt gaccccaacc gcccctccgg caaccggatc ctgggcgaga tccggcgaag
     1081 ccagggagcg gtcctgaggc cacgcgacac ggttgtggtg gcgttcgcgg cctacacggc
     1141 ctgcgacggg ggggacgggt acaaggtgcc agaggcgatg ccggcctgtg gccggcggga
     1201 ggccgcaccg agggcgctgg acctgctgac ccggtatatc acggattccc tgaaggggag
     1261 gatcgatccg ccacggggct cccgggtggt cgaggctgga aacacaaatc ccggctgagc
     1321 aggtgctcgc cgggaccagg cagctttagc agttttcatc acccaggctg caaagctaaa
     1381 atccctgggg ccccgaaggg ctatgttcct caatcgcttg acgcaatgta agcaggccaa
     1441 gcccggctcg caagccgctt ctcccgctcc cttcagcctt cggctccgag tattataggc
     1501 catgggttta accccttacc catccctcgc cacactaccc agcgcttttg caaccgcctg
     1561 ccggctctct cgaaccgagg gagagctgtt cgagcgctgc cggatcgcgc ttgtccggcg
     1621 tttccaaagt gaacggatct ggtttaccct gacctcgccc accgaatcgc ttccccgggt
     1681 ggggcccgcc gccgggttcg aagatggggt cgaggtggcg cgcctgggca gcggccagac
     1741 cgaggtggtc atccacgcgg accccctcgt ggcggaagag atgcgccccg tggcgatgtc
     1801 actggcgctc ggcctcagcg tggtgctgga gctccggagt atcctgctcg agagacaggc
     1861 cgcgctggac gacgcggtgt ttcagctccg ggccctgcgt caggtggccc ggcttctttc
     1921 gtcggttcat tcgactgaag aaaccgaaca gctcatcctg gacttcatgg cggaggtgtt
     1981 cttcgcctgg tgggcctgcc tgtaccggcc cgagggcgag acgtacatgc ccaccgtctt
     2041 tcgttcgttg aacgaccggc tgcggccggc accgatcgat cggaccgcgc tggacgaggc
     2101 gctcccgccg ggaagcactg ccacgggggc cgatgacgtc tcggttgcgg agctggtcgg
     2161 acccggagcc gagctggtgg ttcccctcga cgccggggcg gagcgcatgg ccatgctggt
     2221 gctcgggtcc cggatcagcg ataagttgta cggccgggcc gagtcggagc tggcgggcac
     2281 cctctccttc gccgcggcga ttgcgctcaa gaactcggag ctggtggaac agctccacag
     2341 cgcggccacc accgacgagc tgacggggct gtgcaaccgg cgcgctctgg aggaccgtct
     2401 cgccgccgaa atttcccgga gcttgcgcca tcagcttcac accagcgttc ttctcctcga
     2461 cctcgaccgg ttcaaggtgg tcaacgatac tatgggccat gccgccggcg accgactcct
     2521 ggtgcaagtc ggccagattc tccgcaagca gtgtcgagcg ctggacgtgg tcgggcgtct
     2581 cggtggggac gaattcctgg tgattctgcc gatgacaaag ccggcggagg ccaaggtatt
     2641 cgttgcccgg gtgcaggcga gcctgcgaga gatcgaaaag accaaccctg aattcggcgc
     2701 ctgcacgctc agcatgggga tcgccgaatc gcctcatcac ggcaccacgg tcagcagcgt
     2761 cctggccgcg gcagacaacg ccctttaccg cgccaagcgt gggggcagga acacggttga
     2821 ggtggcggaa gcctagatga ccatgacgga acccgagttc atcctgctgg gcgacgcgct
     2881 ctggctcgac ttcatcaaca ccgccagagg acgggtgccc acttcgcccg atctcctccc
     2941 cgatgaggct gccctgctcc gctggtcggc ggcacagagc atccacctca acggtggtcc
     3001 gcctcctctc cccctcgtgc tgcagcttcg cgagcggctg acggcgctgg cggaggcgct
     3061 gcacgccggg cttcagcctc ccgcggcatc catcgcggcc atcaatgagc agctggccca
     3121 gggtggcggc tgtcatcagc tcaccaggat cagcggggag tggcagctcc ggtttgcccc
     3181 ggagcagagc ccggccgttc tccaggccat cgcccagtca gcggccgcca gtctggccga
     3241 ttcgctacgc tttgtgcgtc gctgcgccgg tgagggctgc tccctcttct tcagcgacga
     3301 ttcgccgaat cagagccgcc gctggtgcag cgtcgcggta tgcggccgcc agatgaaggt
     3361 cgagcggcgg cgcggactcc tgcgctgacc agcggcatcg aaccactgga atatttccgc
     3421 cgcacccagg cggcgctcgg cgaccgctac cgtctgcagc gcacggttgc cactacccag
     3481 gagctcgccc tgttcgaggc ctgggatcag gtgctgaagc ggcgggtcag tctccgagtg
     3541 gatctggatc ccgcaaccag aggctggttc ctccgagagg cagaggcact cggccggctg
     3601 gaccaccccg ctatccgcca cgtgtacgac gccggtgtgc ttggcaatct ggcgtatcgg
     3661 gtaggcaact ggattgaggg cgagagtctc caggctgcgc tccgccgcgg gccccggccg
     3721 atccccgagg tgcacacgtt ggctcgcgac ctcctgggtg ctctggagca tgcccatgcc
     3781 catgttatca tcgttcgccg ggtggtaccc gcctcgctgc tgctgagtac cgcaggcaga
     3841 gggacggtga ccgacctgcg tttctgcagc tatacccttt cagccatccc gcccggtacc
     3901 atcccgcccg agccggccta tatggcgccg gagatccgag agggcgccac cggtgacgcc
     3961 acgagcgacg tctacacggc cggcgcttta ctctacgtcg cgattacagg ccaggcgcca
     4021 ccgctcgatc ccaaccagct gcggcgtcca accgagttga ggccggcctg ccctcgcgcc
     4081 atcgaacgga tcgtcatgcg ggcgatgcag cccgcgccgg acgaccggta tctcaccgct
     4141 gcggagatgc tggaggactt cgcctcggac gcgggcacat tcgagacgcc actggtcccg
     4201 gttagccagg ggcctttggc ggacgtcgag gacaaggccc gctgggagaa gcggctccgc
     4261 agggccctgg gtgatgacta cgagctgctc ggcctgttgg gaaccggcgg cttcggccgg
     4321 gtgtatcggg tgcgcgatct gcgcctcgag cgggaggtgg cactcaaggt tctccagcct
     4381 cttctcaccc gggatcccga ggtggtagag cggttccgcc gggaggccca gctcgcggca
     4441 gggctgagcc atcccaatat tgtgaacatc tacgatatcg ggggtcgatc gggactcctg
     4501 tggtacacca tggagttgat cgaaggcccg agcctggctc agctggtgga acgcgacggg
     4561 ccgctcccgc tcgaccgggt gctgcggctg ctgcgagagg cgctctccgc ccttgcccac
     4621 gcgcatggtt cgggcctggt gcaccgcgac atcaagcccg agaacatgct gatcgacctg
     4681 acggggagcc tccagatcac cgacttcggc cttgccctgg cgatccgggg gaaatacgcc
     4741 ggagcaagca gccagagcgg cactccccaa ttcgccagcc ctgagcagct tctcggtgag
     4801 cgggtggatc agcggtcgga cctgtacagt ctggcggcag tagcatacta cgccctgctc
     4861 ggcaggccgc ccttccccgg aagtacggtc gagcaggtgc tcgccaaaca aaccaccaat
     4921 cagttcccca cttcccgggg gcagcgggac gatgtgagcg aggcgctgga acgggtcctc
     4981 gatcacgcgc tcagcgccga cgtggaagaa cgctattcat ccgcggccga atttctccaa
     5041 gccgtgaacc atgccgccgg cgactccggt cgggagccgg tggccgactg ggctcgcgcc
     5101 gcggctcgtt ggctccgcgg ctcccccctt gactaaatgc cgtcactata caaatttgtc
     5161 cgcgcgatgc gtcccccaga gtacgtctag ccgactgatt tagtgggatt tagagaccca
     5221 ggtggattgt ccgcgggtct tttcaatttt tatgacgtgg gacaggcctg cgctcataag
     5281 aactcggtgt ccggacttgc cggcaccgac gcagtcaaac aaacaggagt aggcgaaatg
     5341 gctcgcacca tcggcacggt gaagtggttc aacgacgcga agggctttgg tttcatcact
     5401 ccggagaacg gtgacaagga ttgtttcgtc caccacaccg ccatcaaggc ggaaggcttc
     5461 cgcagccttt ccgagggtga tcgggttgag ttcgacatcg tgcagggtgc gaagggcccc
     5521 gccgccgaga acgtcaccaa ggttaagtag ggcccacctc ttggtgggcc gtagtcgaaa
     5581 gggccgctca gccgagcggc ccttttgttt gcgggaatcg agagaccctt cgctgcgctc
     5641 agggtgacac ggggcttcgc gccatgtcat ttatgccgat agatcactcg accccgcgtg
     5701 agatcatacg gcgaaagcac cacactcacc cgatcgcctt ccaacacgcg aatcttgaat
     5761 ttgctcatct tgccggccgc gtaggccaga atctcgtgac cgttctccag catgacccgg
     5821 taatttcggt cgggcagcac ctccgtcacc accccttcca tctcaatgcc ttcttctttg
     5881 gccatccagt atctccacga gggtcccggg acgccgacag gcgcccgacc gaggtgatga
     5941 agcgggtgga atcttgtcgg tatgacggtg ggaatcaact gcggagctcc gagcgggccc
     6001 ggtcgatgtg gctttccacc aattgtacca gctctgcaat cgagtccaca tcgaaggtga
     6061 ggcgggcgcc cgcggtccgg tagatctcgg gaagcggctg gaccgcgccg agtgagagcg
     6121 cctctcggta ccgcgcgacg gcccgaatcg gatcttccag gctgttgcgc cagacctgaa
     6181 ccgccccgag ctgcgcgatt ccgtattcga tgtagtagaa cggatacatg aagatgtgaa
     6241 gctggcggtg ccagcgggct acccgctccc gctcgagccc gctccaatcc acgccgcgct
     6301 cgaaacggct gcggatccgg agccaggccg cgtctcgcgc gtccgcgttg ccgccctgct
     6361 cgttggtgta gatccaggtc tggaatgcat cgactgaagc gatatgaacc aggctgatca
     6421 gtatgtcttc caggtgttcc agccaggcgc tccgcgcgtc ctgagcggtg aagtagccga
     6481 ccggcagggt cagatggggc gtggcgagga gctccatgga catcgaggcc agctcggccg
     6541 cttctgagcc gggatgacgc tgccatatca gaggcagacg gtgtgcggca aaggcatgga
     6601 aggcgtggcc ggcttcgtgc atcagggtca tgacgtcgtc caccaggccg acggcattca
     6661 tgaagatgaa aggcctgccg tggaagtgta gggtctcgca gtatcctcca ggcgctttgc
     6721 ccttccggct ctccagatcg agcagtccct cgtcgatcat ggtctggaac tcacggccca
     6781 gcagtgggtc tatccgctcg aagacccgtt gggccttccc cacgagctcc gacgcgccgc
     6841 tgaatgggcg caacggcttt tcgcggtagg gatccaccgc gaggtcccag ggacggagca
     6901 ggtcgagacc gagccgctgg cggcgagctt gcatgacccg ctccactgcc ggcgccacgg
     6961 tttgctcgat ggcctcatga aaccgctcgc aatcggccgg ggtgtaatcg aaacggaact
     7021 tggcggggaa gatgtagtcc cggaagttgg cgaagccggc gttccgggcc gcccgcatcc
     7081 tgagctggta catgcggtcg aagagcgtgg ccagctcgtc tctgcgctcg acgtatggca
     7141 ggctggccgc tcggaacgcg cgctcccgga ccgcccgatc gggactcttg agatagggct
     7201 ggagctgagg cagcggccgc tccacgccct cccattccac catgatggat ccggtgatgc
     7261 gctgataccg ggcgctatgc tcctccagct cggcaaagat gggaacgttc tcgtcccgaa
     7321 agatctcgat ctgggtgcgg aaacgggtta gcgtcgtggc cagctcgggc gtcgagtggc
     7381 ccgactccac cagcctgcgg gcaagctcga cgctgcgctc ctccatccgg ggcagaacct
     7441 cggtggagaa tcgcaggtga tcggcttctt tttcccgatc actcgtatcg atggtgtacg
     7501 cgatcatggc ccgggcggcc gcctcggtga ccagctcctc gagccgggac cactcgacca
     7561 gccacgcctc gatggtggaa ggctcgagcg ggcgcccggc aagatcatcg aagtagggcg
     7621 cgacgtcatc ccagctcgcc ttggcgaacg cggagggaga tgggggcaag acagacacag
     7681 tcactgtgac tcctgattct gaatcaggga catgggttcc cagatataac cggggccagc
     7741 cgcgagtcac aatggcgcga gcggcgggaa aggtctgtca ggtgacgctc tcctggcgct
     7801 ccccacccac caccctgccc tgccggtggt agaggtaggc gagcaggagg aaaacgagac
     7861 cgagtatgaa cacggagccg acccgataga gagcgtcgag cgaggaaaga tcgaacagaa
     7921 gaaccttgac caccgcgagg cccgcgacgc ccagtccggc aatgcgggcc ggcttgaggg
     7981 ctcggcggaa cccgacgccg accagcgcgg ccgcgaacac gagccaccag gcgctgacgg
     8041 ccagcccgga cgcgaggctc gcggtctgaa cggaaagggt cttcaactcg aagtagcgct
     8101 ggatttcccc ggtcgccccg aagagcacca tggccccacc gagggcccag agcccgcccc
     8161 tgacgagcgg agcggcgctc gcggcgccga cccgccgcca gagtccggct gccagcccca
     8221 gcgtcacggc caccgtaccc cacagcgcga acgcccacga ccccacaaag gcggaatcgg
     8281 ccgcggtgcg cccgtcgagc gccccggtaa agagctgatt cagcgccgcc cagagagtgc
     8341 ccagggcgaa ccagcgtcca tcctcgcggg tgagcagatg gtcgagggct gcccagagga
     8401 gcgtcaggga gaggagagcc cagacccgtc cgacaccgtc ccagtgctgc caggcggcaa
     8461 tgccggccgc cgccgcgccg acgagggcaa aggccggccg cggccgttgg tacccggcga
     8521 tgaggtatgg cagcgcaacc agcagcgcga cagcgccggg cctcgcgttg aaccaacccg
     8581 ggtcaagacc atgcaccgcc caacccagaa ggacaggagt cagaaagaag tacagcgcct
     8641 cgccgagcga ccaccccggc gtgaccgatc cagtcggaag ctgcaccggc aggatccggg
     8701 tggagcgaag ggcgtaccac cacaccggtg cggccagcac cagccccgcc agaagaaccg
     8761 cccacggatg gtggagacga tcgctcgcag ccgcgaggaa tgtccagccg cccgagaacg
     8821 agagcagccg ggactcccac cagcgttccc ggagcccgac gtggattcca gcggttccgc
     8881 cgagcacgcc gtagaggagc acggcccagg gcgtgccgcg ctcggcggcc ccggtatagg
     8941 caacgccgaa gaagctcacg gcgacaacga acatcgtgag acgccagcgg cgccgcgccg
     9001 cgaccagtcc gagtcccgcc gccatcgagg ccagatacaa caggagcaga tccgcattgg
     9061 catagtcgcg gcccaggagc agcggcgcga agaacgcacc cagcgccgcg gtggtgccga
     9121 gcgcctcgac gtcaatggca tacgcaatca tcgcgaggga gaccgacacc atcgcgagtc
     9181 ccaggatgcc ggtcgttgga ggcagcacct cgtagagccg ggctgcggcc cagacgctga
     9241 gatagatgat tgccgcgccg cacccgatca acgcggcgcc gtacgtgcgg tatcggggct
     9301 gaagccgcca gccgattgca cccacgatcg ctccggcgca gacgccgccg atgcaccgca
     9361 tgatgggcga gatccagccg cggtcgaacg agagacgcag caggtatcca gcggcgagga
     9421 tgagggcgac gacaccgatc gcaaggagca cccgctggcc gatccattgt tcggaggaca
     9481 ggagcggggc agcagggcgg cggggcggcg gggcagttcc tatggccgac gatcctgctg
     9541 cttgcggagc atcaaccgtg cgacgttcgg tgtggacacg cgcctgcccc gctgccccgc
     9601 tgccccgctg ccccgccaac tcctcaagcc gggccacccg ctcctccagg cgctgaatcc
     9661 ggtcttcctc gctcatcagg cttccgctcc ttctgccgcg cgtttggcgg ctctggggtg
     9721 cacgtcgacc tgaaatgcca tgatgcccac cagcgctacc agcacgcccg ccgtataaaa
     9781 cggccagccg tgtcccagcc gttggaaggt gatcgtcgca aggatagggg ccaggaccct
     9841 ggccagcccg gcgaacgtct gcgccactcc catcgtggtg cccagctcac ccggatccga
     9901 ataccgtgac atgagagaag tcgtggccgg gaagaggaga gccgtaccga tggggaccaa
     9961 gggtatgacc agcccgagcg tccagagatc gcgaggaagc gggtacaatg caaggccgag
    10021 caccaggagc accgtgccga tccgcatggc ccaggtctcg ccgatccggt ccacgatcgg
    10081 accgagcagc aggcttcgca tcacaaagga gaggaccccg acatagagaa atacgtaccc
    10141 gatggtcgtc tcatcgatcg agaactcggc acccagatag agagccagca cggaggtcat
    10201 cgaagcaaac gcgagcattc ccacgccgta gatccagagc agccgtccga tcgcggtggc
    10261 cgggtgccgc agcgccatcc atgcgggatg ccagatcggc ttgcgggccc tggtggagac
    10321 cggcgccggc tccttgtacg attccggcag ccatttccag gcaaagaaga cgttgatgag
    10381 gcagagtgcc gccgcgatca tcccgggcgc cgcctggccg aaatgcgcgg caaacgagcc
    10441 gatcgcgggc ccgaccatga caccggccga cgtcgccgcc gagagccagc cgagggcgcg
    10501 cgcacgatcg gccggcttga ccgtatcggc cacgtaggcc tgggccacgc cggtcgtgcc
    10561 gccgccggcg ccctgcacca ggcgggagag aaagagcagc cagacgctgg tcgccagacc
    10621 gaagacgacg taggccatcg ccgaggcgct gagtccgatc aggagcgcgg gccgccgccc
    10681 gtagcgatcc gatacccggc cccagatcgg cgccgccagc agctgggcaa ccgagaatga
    10741 cgcgatcagg cggccgatag tctccggcgt tgcctggagc ttgagcgcgt agaacggcag
    10801 cagcgggagc acgatcatga acccgatcat gtccacgaaa ttcaccgcga tgagcacggc
    10861 cagccggcgg aactggctgc cggaatcgga ggcgctccgg ttcatccggt cccgccgcgg
    10921 tcggcgccga gggcgaatac tgcggcgctg atagccatca agaccacgcc gtaggcagcg
    10981 gccaccccca catcggactg ccggagactg gacagaatct cgagcgagat cggtcgggta
    11041 tcgtaggtgt agagcatgat cgaggtcacg aagtcaccaa acgcggtcac gaaggccagg
    11101 cttgctccag ccacgatggc cgggcggagc agcggaagcg tcacccgtcg gagcgtccgc
    11161 cagcgtccgg cccccagcgt cgcggcggcc tcatccagcg aggggtcgag cgcgcggaat
    11221 ccggcgagaa tggctcggct ggtgatcggc agattcctta cgagataggc gaacggaagg
    11281 agccagaggg ttcctaccag aatgaatcgg ccggccaggg gcgcgtgcac gctgaacgcc
    11341 gtcgcgagcg cgatcgcgaa gacggtgccg gggaccgccc acggcagcgc aagcagacct
    11401 tcaatcgtcc gcccgaatct cgcccgccgg cggacggaga cgactcccgc cgccacggcg
    11461 atgctcaccg cggcgatcgt cgccgcgctg gcgagccaca ggctgttgaa gagcggccgg
    11521 gcccgcaccg gatcctcgat cagcgtcagg tagttccgcc aggtataggc gggcggcacc
    11581 ggctcggtgg tccaggtgcc gaccggcacg aaggagacca gcagcagggt gaggtggggc
    11641 agcaggagca gcagcgccag cccccagccg accaccccca cgatgagacg caccgccggt
    11701 cgcttgaccg gcaggagggc gggagccacg cccttgcgtc cgccggccgg gctctcgaac
    11761 gccgcagtcc cccgcaacag ccacagggcc aggagggcga tcagagtgag cgagatggtc
    11821 tcgaccatgg cgagctggtc atcgccattc agccgggtgg cgacgatctg ggtggtcatg
    11881 acccggaatc cgccaccgaa gatgtagggc gcgctgaagg acgcgagc
//
LOCUS       DASYRV010000559         1818 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2631054, whole genome shotgun sequence.
ACCESSION   DASYRV010000559 DASYRV010000000
VERSION     DASYRV010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1818)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1818)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1818
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2631054"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1094)
                     /locus_tag="VGQ24_14825"
     CDS             complement(<1..1094)
                     /locus_tag="VGQ24_14825"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEV8456171.1"
                     /translation="MARSVAQPYLPSDSSFNPATPDSFSIAGRMSSAVTSTDLPLVSR
                     APGYGHRIAIVDSGGTHTYAELLAASERVAGTLLAGRQDLDEARVAFLTPADFSYAAV
                     QWGIWRAGGIAVPLATSHPPPELEYVLRDAGAELAVVGPEFADGLGRIAERCGVRVLS
                     TGQALGGPPPRTLPTLAPQRRAMIVYTSGTTGQPKGVVTTHANLVSQVTPLIEAWGWV
                     PDDRILLVLPLHHVHGIVNVVTCALWAGAACEMLPTFDAGIVWDRLASGRLTLFMAVP
                     TIYRKLIAAWDAAPAERQRALSAGSAGLRLMVSGSAALPVQTLELWRGISGHTLLERY
                     GMTEIGMALSNPLHGERRPGFVGTPLPGVQV"
     gene            1355..1744
                     /locus_tag="VGQ24_14830"
     CDS             1355..1744
                     /locus_tag="VGQ24_14830"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8456172.1"
                     /translation="MTVGVKRRILVVDDDEGTRRSLEILLTKEGYEVVQARNGSEALR
                     AWRDHGGDLVIMDLLMPERGGIETIVELLAYNPAIRIIAMSGGGDTKRFDLLGDAGML
                     GAVATIKKPFSSAEMMAAVSRALNGPS"
BASE COUNT          340 a          552 c          631 g          295 t
ORIGIN      
        1 acctggactc cgggaagcgg tgttcccacg aaccccggac ggcgctcacc gtgaagcgga
       61 ttggacagcg ccattccgat ctcggtcatg ccatagcgct ccagcagcgt gtgtccgctg
      121 atgccgcgcc agagctccag cgtctgcacc ggcagcgccg cggagccgga caccatgagg
      181 cgcaagccgg cactgccagc actcaaggcc cgctgtcgct cggcgggggc ggcatcccag
      241 gccgcgatca gcttccgata gatggttggc accgccatga agagcgtgag ccggccggag
      301 gcgagccgat cccagacgat cccggcgtcg aaggtcggaa gcatctcgca ggccgccccg
      361 gcccagagcg cgcaggtgac cacgttgacg atcccatgga catggtgcag cgggagcacc
      421 agcagaatgc ggtcgtccgg aacccagccc cacgcttcga tcaggggggt cacctgtgac
      481 accaggttgg cgtgggtggt caccactccc ttgggctggc cggtggttcc gctggtgtag
      541 actatcatgg cgcgccgctg aggcgctaag gtcggcagcg tcctgggagg cggccctccg
      601 agcgcctgcc cggtgctcaa gacccggact ccgcaccgtt cagcgatccg acccagcccg
      661 tccgcgaatt cgggtccgac gacggccagc tctgctcccg cgtcccgcag gacatactcc
      721 aattccggag gaggatggct ggtggcgagc gggacagcga tgccgccggc gcgccagatt
      781 ccccactgga cggcggcgta cgagaagtcc gccggggtca ggaacgccac cctggcttcg
      841 tcgaggtcct gccgtcccgc caacagcgtg ccggcaacgc gttccgaggc cgcgagcaac
      901 tcggcatacg tgtgagtgcc gccggagtcc acgatggcga tccgatgacc gtagccgggg
      961 gctcgggaga cgagcgggag gtcggtactg gtgacggcgc tgctcatgcg ccccgcaatg
     1021 gagaaggagt cgggcgtagc cgggttgaag gacgaatcgg agggaagata cggctgggcg
     1081 acggatcgag ccatggccca gtgcccccgc agagcctgga agctctcggc aactttttgc
     1141 agcgcgttcc ttgtgggcga taaggtggtt gttggggacg gctatgcgtg gatgcttctc
     1201 aagagtctat taccttgaag ggactgggct gagtacgtgg cccactacgt gctgtggaac
     1261 gcgcgcccgg caagcatgac cgcatcggtg ggttccggcg acgggtacgc aggtcacgcc
     1321 agcaaaccac tttccaaggc gtcgaggaga gagcatgact gtaggagtca agcggcgaat
     1381 cctggtagta gatgacgacg agggcactcg gcgttcactc gagatcctgc tcaccaagga
     1441 agggtatgag gtcgttcaag ctcgtaacgg atccgaagcc ctgcgcgcat ggcgggatca
     1501 tggtggagac ctcgtcataa tggacctgct gatgccggaa aggggtggga ttgagacgat
     1561 cgtcgagttg ttagcctaca acccggccat tcgaatcatc gcgatgtcgg gtggcggaga
     1621 caccaagcga ttcgatctgc tgggggacgc cgggatgctc ggcgcggtgg cgacaatcaa
     1681 gaagcccttt tcgtccgccg agatgatggc ggcagtgagt cgcgcgctga acggcccgag
     1741 ttaaatccgt tcgtcgagga cttcgcgcac ccgacgaaga agatccgtga cggtccacgg
     1801 tttgttcaag aagctcag
//
LOCUS       DASYRV010000560         5038 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3466278, whole genome shotgun sequence.
ACCESSION   DASYRV010000560 DASYRV010000000
VERSION     DASYRV010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5038
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3466278"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..939)
                     /locus_tag="VGQ24_14835"
     CDS             complement(<1..939)
                     /locus_tag="VGQ24_14835"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8456173.1"
                     /translation="MARVSRLAWGAAAVALGLGILAAALEVMGYDAAAALGALWLGAF
                     GSWYAFASATLVRAVPLILIGLGIAIAFRGGALNIGAEGQFYAGAIAATWVALRAAAL
                     PAPVAILAVLLAAALAGALWVALPVWLKLRFGVIEVISTLLLVFVAELLVSLMVQGPL
                     QERGHIYPQSDAIPASARLPLIVGTRLHAGFPLALGLGATLWFVFSKTWWGFKLRAVG
                     VGPRAAEVSGRIDSQRVGAAALFLSGAMAGLAGGVEVAGVSYALYLNLSPGYGFTAIA
                     VALLAGLHPAGVVITGILFGALEAGAGAMQREAGVPA"
     gene            complement(932..2404)
                     /locus_tag="VGQ24_14840"
     CDS             complement(932..2404)
                     /locus_tag="VGQ24_14840"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEV8456174.1"
                     /translation="MPPVLELIGIQKRFGSVQALDGADFTLHPGEIHALLGENGAGKS
                     TLMHVAYGLVRSDAGEVRVNDGVRRIASPRQARELGIGMVHQHFTSVPALTVAENIAL
                     TAGWAVAPNRLWDRTRRLSERLGLPLDPDQRAGRLSVVLKQRLEIVKALAGEARILLL
                     DEPTAVLAPAEADELLRVVRVFTEAGGSAVLITHKLDEVLRAADRVTVLRQGTVTYAG
                     TVAGQTVESLTGAMIGPESNRSSSFTALQAGAPPATAKRELIRLQALELSRESGYGIA
                     IRHAALVVGSGDIVGFAAVEGNGQRELLRAVAGRIVPLRGRLEVVQPVAFIPEDRTSE
                     GLIPELDLTENVTLGLGPDAPWMRRGRIRWGEARARTADLLQEFGITASGPRARAASL
                     SGGNQQKLVVARELSRNPAVIVAENPTRGLDIAAESAIHRRLRSAAAAGAAVLFHSTD
                     LDEVLGLAERVIVVARGVISEVPPQASRATIGAMMLGGDG"
     gene            complement(2410..3207)
                     /locus_tag="VGQ24_14845"
     CDS             complement(2410..3207)
                     /locus_tag="VGQ24_14845"
                     /inference="COORDINATES: protein motif:HMM:TIGR00486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051540 - metal cluster binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HEV8456175.1"
                     /translation="MKAGVPLDALVAYLDEYLRIKQIPDEANAVNGLQVENSGQVGGI
                     VAAVDASQATIDGVIATLEPGQPPPILLVHHGLLWDGNVPLTGRRYRRVAALLDHDIP
                     LYSAHIPLDVHPEVGNNAVLAERLGIRVEGWFGSYRGIAMGVWGHAPASLTTRDSIAL
                     ELDRVLHTLKGNATLIPGGPERPARIGIITGAAGNMIGEARAAGLDTYISGEGPHHTY
                     FDAMEWGLNVVYAGHYATETLGVQAIASHLAERFDLDWDFHDHPTGL"
     gene            complement(3204..4181)
                     /locus_tag="VGQ24_14850"
     CDS             complement(3204..4181)
                     /locus_tag="VGQ24_14850"
                     /inference="COORDINATES: protein motif:HMM:NF014647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family protein"
                     /protein_id="HEV8456176.1"
                     /translation="MALSACSQSHSAKVRVGLITPGSIADAAWNSGAYQGLVRIRDSL
                     GLAVSHIEARTPAEQSEALRTYAAQGYDLVFAHGFEFQELAERVSGEYPRTVFIVTSG
                     RRSRGNVSPLIFRLEEASYLAGMVAGGLTRTNVLGFIGGIKLPPIEAAYNGWVNGARA
                     VNPKVRSRQIYLNSFDDAAAGREAALALIAAGADMFHHNADAAALGVFQAVKEHPGVY
                     VFGANADQSRLASGHVPGSAVIDLPRAFLLVASEVRSGRFRPHVEAFGLKSGVVRYVT
                     DPRFDSLIPSALKARVQAATDSIEAGRLIAAPRPATMEAGARARQRSLT"
     gene            complement(4309..4731)
                     /locus_tag="VGQ24_14855"
     CDS             complement(4309..4731)
                     /locus_tag="VGQ24_14855"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HEV8456177.1"
                     /translation="MGIFTNAARDEEGNELKRRRTDQIPFSIIASDMTVIGDLETEGV
                     VRIEGKVRGMVRVGAQVLVAAGAVIEGDLHTQEAIIAGQVNGAIHARERVELQATAMV
                     AGDILTPRISIVEGARVTGEVKMDLGKETEGAASSHNR"
     gene            complement(4731..>5038)
                     /locus_tag="VGQ24_14860"
     CDS             complement(4731..>5038)
                     /locus_tag="VGQ24_14860"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEV8456178.1"
                     /translation="PGIDIAVSVGSLVRASGGATVGHAGEDPEYGFFVLLDHPEDYQT
                     MYGHLSRILVTQGATVASGEVIGLSGNTGRSTAPHLHFEIRRRGSSLDPLTMVKEGR"
BASE COUNT          961 a         1715 c         1525 g          837 t
ORIGIN      
        1 cgcggggact cctgcctccc gctgcattgc tcctgctccc gcctccagcg cgccgaatag
       61 aatgcccgtg ataaccacgc cagcaggatg caggcccgcc agcaaagcga cagcgatggc
      121 ggtgaagcca tacccaggcg agagattgag atacagcgcg tacgagacgc cagccacctc
      181 gactccgccg gcgaggccgg ccatggcacc ggagaggaag agtgcggccg cgccaactcg
      241 ttggctatcg atccggccgc tcacttcggc cgcacgcggg cccactccta cggctcgcag
      301 cttgaaaccc caccaggttt tggagaacac gaaccagagg gtcgccccca accccagcgc
      361 cagcggaaac ccggcgtgca aacgggtgcc gacaatcaag ggaagccggg ccgaggccgg
      421 aatcgcgtcg ctttgcgggt atatatgccc ccgctcctgc aggggaccct gcaccatgag
      481 gctcaccaac agctcggcga caaagaccag gaggagggta ctgatgactt cgattacgcc
      541 gaagcgcagc ttgagccaca cgggcagggc aacccacagt gcgccggcta gcgcggcagc
      601 caggagcacg gcgaggatgg cgaccggcgc cggaagcgcg gccgcacgca acgccaccca
      661 tgtagcggcg atcgctccag cgtagaactg accttcggcg ccgatgttga gggcgccgcc
      721 ccgaaatgcg atggcgatcc cgaggccgat gaggatcagg ggtacggccc gtaccaacgt
      781 cgccgatgcg aaggcgtacc aggagccgaa tgcgcccaac cacagggcgc cgagggctgc
      841 tgccgcatcg tagcccatga cctcgagcgc ggccgccaat atgccgagcc cgagagccac
      901 ggcggccgcc ccccacgcca gtcgcgaaac cctagccatc gccgccgagc atcatcgcgc
      961 cgatcgtggc tcgcgatgcc tggggcggca cttccgagat cactccacgt gccacaacga
     1021 tcacccgttc ggccagcccg agcacctcgt caaggtcggt cgaatggaag aggaccgcgg
     1081 cgccggcagc cgccgcggag cgcagcctgc gatgaatggc cgattcggcg gcaatgtcga
     1141 gccctcgcgt gggattctcg gcgacaatga ccgccggatt gcgtgagagc tcacgcgcca
     1201 caaccagttt ctgctgatta cctccgctca acgaagccgc cctcgcgcgg ggacccgatg
     1261 ccgtgatacc aaactcctgc aacaggtcgg cggtgcgagc tcgagcctcg ccccaccgaa
     1321 tccgacctct ccgcatccag ggtgcatccg ggcccagacc tagcgttacg ttctcggtga
     1381 ggtcgagctc gggaatcagc ccctcggagg tgcgatcctc cgggatgaac gcgaccggct
     1441 gtaccacctc caggcgaccc cggagcggaa caatccgtcc agccaccgcc cggaggagct
     1501 cccgttgtcc gtttccctcc acggcggcaa agcccacgat gtctccggaa ccgacgacca
     1561 gagcggcatg gcgaatcgcg atgccgtatc cgctctcccg cgaaagctcg agagcctgca
     1621 accgaatcag ctcgcgcttt gccgtagcgg ggggagcacc cgcttgaaga gctgtgaagc
     1681 tggaagaccg attcgactcc ggtcctatca tggcaccggt caacgattcc accgtctgcc
     1741 ccgccactgt gcccgcgtaa gtcacggtac cttgccgcaa gacggtcacc cggtccgctg
     1801 ctcggaggac ctcatccagc ttgtgggtga tcagcacggc cgaaccgcct gcctctgtga
     1861 agacgcggac gacccgaagc agctcatcgg cttcggccgg agcaagcact gcggtcggct
     1921 cgtcgagcag gagaatccgt gcctcgccag cgagcgcctt aacgatttcc aggcgctgct
     1981 tgagcaccac cgaaagccgc cctgcgcgct gatcgggatc gagcgggaga ccgagacgct
     2041 cgctgagccg ccgggtacga tcccacaacc gattcggcgc cactgcccaa ccggcggtaa
     2101 gggcgatgtt ttcggccacc gtgagcgcag gcaccgaggt gaagtgctgg tgcaccatgc
     2161 caatgccgag ctctcgggct tgtcgaggcg aggcgattct gcgcactccg tcgttcaccc
     2221 tcacctcgcc tgcatcgctc cggaccagcc cgtaggcgac gtgcatcagc gttgattttc
     2281 ccgcgccgtt ctcgccgagg agtgcgtgaa tctctcccgg gtggagcgtg aaatcggccc
     2341 cgtcaagtgc ttggacggag ccgaatcgct tctggatgcc aatcagctcg aggaccggtg
     2401 gcacccgact cagagccccg tcggatgatc gtgaaagtcc cagtcgagat cgaagcgctc
     2461 cgccaggtgc gatgcgatcg cctgaactcc cagagtctcg gtggcataat gcccggcgta
     2521 caccacgttg agcccccact ccatcgcatc gaaatacgtg tggtgcggac cctcgccact
     2581 gatgtacgta tcgagccccg cggcacgggc ctcgccaatc atgttgcccg cggcgccggt
     2641 gatgatgccg atgcgcgcgg gcctctccgg cccgccgggt atgagcgtgg cattcccctt
     2701 caaagtgtgc agcacccggt cgagctcgag tgcaatggag tcacgggtgg tcaagctggc
     2761 gggagcatgg ccccataccc ccatggcaat tccgcgataa ctcccaaacc acccctccac
     2821 ccgaatccca agccgctccg cgagtaccgc gttgttgccc acctcgggat gcacgtcgag
     2881 tgggatgtgg gctgagtaaa ggggaatgtc gtgatccagg agtgccgcca cccgacgata
     2941 cctccggccc gtcagcggca cgtttccatc ccagagtagg ccgtggtgca ccagcaggat
     3001 gggtgggggc tggccaggct ccagcgtggc gattacgcca tcgatggtcg cctgcgaggc
     3061 gtcgactgcc gccacgatgc ccccgacctg cccgctgttc tcaacctgaa ggccgttcac
     3121 tgcgttggcc tcgtcgggta tctgcttgat ccgaagatac tcgtccagat acgccaccag
     3181 cgcatcgagg ggaacgcccg ctttcacgtc agactcctct gtcgcgcgcg ggcgccggcc
     3241 tccatcgtgg ccggtcgggg tgctgcgatg agcctgccgg cttcgatgga atcggtagcg
     3301 gcctgaaccc gggccttcaa cgccgacggg atcaggctgt cgaacctggg atcggtcaca
     3361 taccggacta ctccgctctt gagaccaaat gcttccacgt ggggccggaa gcgaccggac
     3421 ctcacctcgg aagcaaccag aagaaaggca cgaggcaaat cgataacggc gctgccgggg
     3481 acgtgacccg aggccaacct ggattggtcg gcgttggcac cgaacacata cacgccgggg
     3541 tgctccttga ccgcctgaaa aaccccgagc gccgccgcgt cggcgttgtg gtgaaacatg
     3601 tcggccccgg cggcgatgag cgccagcgcg gcttcccgcc cggccgccgc gtcgtcgaag
     3661 ctgttcaaat agatctgccg gcttcgaact tttgggttca ccgcccgggc cccgttcacc
     3721 cacccgttat aggccgcctc gatcggcggg agcttaatcc ccccgatgaa cccgaggaca
     3781 ttggtcctgg tcagaccacc cgccaccatg ccggcgaggt agctggcctc ctcaagccgg
     3841 aaaatgaggg gcgagacgtt tcccctcgac ctgcgcccgg aggtaacaat gaagacggtc
     3901 cgggggtatt cacccgaaac ccgctccgcc agctcttgga actcaaaccc gtgagcaaag
     3961 actaggtcgt acccttgagc cgcataggtg cgcaacgcct cgctctgctc tgccggcgtc
     4021 cgcgcctcga tgtgactcac cgcaagacca agtgagtcgc ggatccggac cagcccttga
     4081 tatgctccgg agttccaggc cgcgtccgcg attgaaccgg gtgtgatcag gccgactcgg
     4141 accttcgcgc tatgtgattg ggagcaagca gaaagcgcca ttaacaagac agcgtgtcgc
     4201 cattttaccg gaagagcgtt cgtgagtggg acgtatgcgg taaattgcac cgattagagc
     4261 cgggaagctc gggtcaaagt tttattttcc acacacttag acgaattttc aacgattgtg
     4321 ggaactcgcg gcgccttccg tctccttacc gagatccatt ttcacttcac cagtgactcg
     4381 agcgccttct actatagaga tgcgtggcgt gagaatgtca ccggccacca tcgcggtcgc
     4441 ctggagctcc acccgctcgc gagcatgaat ggcaccattc acttggccgg cgataatcgc
     4501 ctcctgggtg tggaggtccc cctcgatcac cgcccccgcg gcgactaaca cctgagcgcc
     4561 cacccgaacc atgccccgca ccttgccttc gatgcgaacg acgccctctg tttccaagtc
     4621 tcctatcact gtcatgtcgc tggctattat agagaacggt atctgatcgg tgcggcgcct
     4681 cttgagctcg ttgccttcct catcccgtgc ggcattggtg aagatgccca tcagcgcccc
     4741 tcctttacca tggtcaatgg gtccagcgac gaaccacgcc ggcgaatctc gaagtgcagg
     4801 tgcggcgcgg tggagcgtcc ggtgttgccg ctgagcccta tcacctcacc tgaagccacg
     4861 gtggcacctt gtgtcactaa gatgcgcgaa agatggccgt acatagtctg gtaatcctcg
     4921 gggtgatcga gcaggacgaa gaatccatac tccgggtcct ctccggcatg tccgacagtt
     4981 gcacctcccg aagcacgcac caggctgccg accgatacag cgatgtcgat ccccggat
//
LOCUS       DASYRV010000561         3776 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_759262, whole genome shotgun sequence.
ACCESSION   DASYRV010000561 DASYRV010000000
VERSION     DASYRV010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3776
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_759262"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..193)
                     /locus_tag="VGQ24_14865"
     CDS             complement(<1..193)
                     /locus_tag="VGQ24_14865"
                     /inference="COORDINATES: protein motif:HMM:NF016199.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF447 domain-containing protein"
                     /protein_id="HEV8456179.1"
                     /translation="MIIESIVTTVDVSGSINFAPMGVEWGDETIVLKPFLETTTFRNL
                     SATGVAVVNLTDDAMLFAQG"
     gene            complement(190..864)
                     /locus_tag="VGQ24_14870"
     CDS             complement(190..864)
                     /locus_tag="VGQ24_14870"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEV8456180.1"
                     /translation="MILLIDNYDSFVYNLARYVQELGGEPLVRRHDAIGVDEIFALAP
                     SHIIISPGPCSPSEAGISTEVVRRVGQRIPILGVCLGHQCIGAAYGGEIVRAGMPMHG
                     KTSRIHHSGTGLFAGLPNPFIATRYHSLVIAPASIPPCLQVTATSEDGEIMAVQHLEH
                     PVHGVQFHPESVLTEHGYRLLDHFLRGVPATPRPLPQAADGALPPALEQVNTLATAPP
                     PVDLVR"
     gene            complement(939..2477)
                     /gene="pabB"
                     /locus_tag="VGQ24_14875"
     CDS             complement(939..2477)
                     /gene="pabB"
                     /locus_tag="VGQ24_14875"
                     /EC_number="2.6.1.85"
                     /inference="COORDINATES: protein motif:HMM:TIGR00553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008153 - para-aminobenzoic acid
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component I"
                     /protein_id="HEV8456181.1"
                     /translation="MNGDFTPLVEPLGETAEPTEVCARFLDLPYLVFLDSAAQQHPDA
                     QYSFLTADPVLIVRSKGATTEMRRREDAAWSRVSGDALRTARSYLPGAVVEPVSGLPP
                     FQGGLAGYIGYDWGAMLERLPAPRYDDLAIPDLVLGLYDWVVAWDHRIGTAWLISTGL
                     PDTGIAQERRARERMDGVRERLGGRTGGQVDGRTGGRADGILSATVPGLAAPSYPVEG
                     IDGAREIGLCSTFTHRGYLDAVARVREYIIAGDIFQANLSQRFQSALPEAPFALYRRL
                     RKRNPAPFAAYLAFDDLAVLSASPERFLRLDEKQRLVETRPIKGTRPRGLGPMHDAAL
                     GRALAESAKDRAENVMIVDLLRNDLSRVCRPGTVRVPELFALEQHPTVHHLVSTVLGE
                     LTPGADAVDLIRAAFPGGSITGAPKVRAMEIIAELEPTQRGVYCGSIGYISATGAMDT
                     SIVIRTYLALGGQLYFQAGGGIVADSDVELEYRETLDKARGLIETLVESHQSPDVSRQ
                     SRSL"
     gene            complement(2474..>3776)
                     /locus_tag="VGQ24_14880"
     CDS             complement(2474..>3776)
                     /locus_tag="VGQ24_14880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456182.1"
                     /translation="TRFLEVPPETDLILIPGLCEGHPAILSEKFGVRTEKGPKDLREI
                     PRYFGQAAAGQNYGSYSIEILAEINNAPKLSPTQFRAAADYFRASGADLIDIGCTPGL
                     PFPELGSTVRELREAGMRVSLDSFEPGEILTAVEAGAELVLSVNKSNLEVARELGGTD
                     VRVAVIPDFGEGLDTLDRSIESLERWNVRYLIDPVIEPIGFGFMASLERYAEVHRRYP
                     TTAQLMGVGNITELTSADSTGVNALLLAICEEIGVRAVLTTEVIPWARGAVREIDIAR
                     RLMHHAVANRTVPKGVDDRLVTVKDPEILAYDEAELRRLHAEVRDPNFRIFTDRDTIT
                     VFNNEIFIRGTDIQVIFSQLGVDEPTHAFYLGRELMKAKLAITLGKTYRQEGALSWGY
                     LTPPDDVKAEHVKLTQRSRRSRGGTGGKRGGSPQGGRAAGG"
BASE COUNT          666 a         1230 c         1234 g          646 t
ORIGIN      
        1 cgccctgggc aaacagcatg gcgtcatcag tgaggttgac caccgccaca ccggtggcgc
       61 tcaggttccg gaaggtggtc gtctccagaa atggcttgag gacgatggtc tcgtcacccc
      121 actcgacccc catgggagcg aagttgatcg atccgctcac atcgaccgtg gtaacgatgc
      181 tctcgatgat cacctgacga gatcaactgg tggtggggcg gtggcgaggg tattcacctg
      241 ctccagggcc ggaggtagtg cgccatcggc ggcctggggt aggggtcgcg gcgtggctgg
      301 cactccgcgc aggaagtgat cgagcaggcg gtatccatgt tcggtcagca ccgactcggg
      361 atgaaactgc actccatgca ccggatgttc gaggtgctga accgccatga tctcgccgtc
      421 ctcggaggtg gccgtgacct ggaggcacgg cggaatagac gccggtgcga tcaccagcga
      481 gtggtagcgg gtggcgataa aggggttggg tagtccggcg aagaggccgg tgcccgagtg
      541 atggatcctc gaggtctttc cgtgcatcgg cattccggcg cgaacgattt ccccgccata
      601 ggccgccccg atgcactggt gacccaagca gacgccgaga atgggaatcc gttggccgac
      661 gcggcggacg acttccgtcg atatgccggc ttcactcggc gagcaggggc ccggcgagat
      721 gatgatgtgc gagggcgcca acgcaaatat ctcgtccacc ccgatggcat cgtgtcggcg
      781 gaccagcggc tctcctccta gctcctgcac gtatcgagcg aggttgtaga cgaaggagtc
      841 gtagttgtcg attagtagaa tcatcagagt gggtcacgag tcacgagtca cgagtcgcca
      901 gtcatcagtc accagtcacg agtcacgatt cagacgaatc acagcgacct agactggcga
      961 ctgacgtctg gcgactggtg actctcgact aacgtttcga tcaacccccg cgccttgtcg
     1021 agcgtctccc gatactccag ctcgacgtcc gaatctgcta cgatgcctcc gccggcctga
     1081 aagtatagct gaccgccgag ggcgagatag gttcgaatga cgatgctcgt gtccatggcg
     1141 ccggtggcgc tgatgtagcc gatcgatccg cagtagaccc cgcgttgggt cggctccagc
     1201 tccgcgatga tctccatggc gcggaccttc ggagcccccg tgatcgagcc gccggggaac
     1261 gccgcccgga tcaggtccac agcatcagcg ccgggtgtca gctcaccgag gaccgtggag
     1321 acgaggtggt gcacggtcgg gtgctgctcc agagcgaaga gctccgggac ccgcaccgtg
     1381 ccgggccggc acacccggga gagatcgttt ctcaagaggt ccacaatcat cacgttctcc
     1441 gcccggtcct tggcgctctc ggccagcgcg cgtccgagcg ctgcgtcgtg catcgggccc
     1501 agcccgcgcg gccgagtgcc cttgatgggc cgggtctcga ccagccgctg cttctcgtca
     1561 aggcgaagga accgctcggg cgacgcgctg agcacggcga ggtcgtcgaa ggcgaggtag
     1621 gcggcaaatg gagccgggtt ccgtttcctc agtcgccggt agagcgcaaa cggggcctcc
     1681 ggcagcgcac tctggaaacg ttgggagaga ttcgcctgga agatgtcgcc ggcgatgata
     1741 tactcccgca ctcgggcgac cgcgtcgaga tagccccggt gggtaaaggt ggagcagagg
     1801 ccgatctcgc gagccccatc gattccttcg accgggtacg acggagcggc gagccctgga
     1861 acagtggccg acaaaatccc gtccgcccgt ccgcccgtcc gcccgtccac ctgtccgcca
     1921 gtccgccccc ccagccgctc ccgcacccca tccatccgct cccgggcccg ccgctcctgt
     1981 gcgatccccg tgtcgggaag cccggtcgag atcagccagg cggtgccgat ccggtggtcc
     2041 caggcgacta cccagtcata cagaccgagt accagatcgg gaatcgcgag atcatcgtat
     2101 cgaggggccg gaaggcgttc gagcatggca ccccaatcgt acccgatata cccggccaga
     2161 cctccctgaa agggaggcag tccggagacc ggctcgacca cggcacccgg cagatacgag
     2221 cgggccgtgc gcagtgcgtc acccgagacc cggctccagg ctgcgtcctc cctccgtcgc
     2281 atctcggtgg tagcgccttt actcctgacg atgaggaccg gatcggcggt caggaaggag
     2341 tactgcgcgt cggggtgctg ctgggccgcg ctgtcgagga acaccaggta gggaagatcg
     2401 agaaagcggg cgcagacttc tgtcggctcc gccgtttctc ccagcggttc caccaacggc
     2461 gtgaaatctc cgttcatcca cccgccgccc gtccgccctg agggctcccg ccccgctttc
     2521 cccccgtccc gcctcgcgac cggcgtgacc gttgggtcag cttcacgtgc tccgccttca
     2581 catcgtcggg cggagtgagg taaccccagc tcagcgcgcc ttcctggcgg taggtcttgc
     2641 cgagggtgat ggccagcttc gccttcatca gctcgcgtcc cagatagaac gcgtgggtgg
     2701 gttcgtccac gccgagctgg gaaaaaatca cctggatatc agtgccacgg atgaagatct
     2761 cgttgttgaa cacggtgatg gtgtcgcggt cggtgaagat ccggaaattc ggatcccgca
     2821 cctccgcatg cagacgtcgc agctccgctt catcatacgc caggatctcc gggtccttca
     2881 ccgtgaccag ccggtcatcc acgcccttgg ggacggtgcg attcgccacc gcgtgatgca
     2941 tgagccggcg ggcgatgtcg atctcccgaa cggcgccacg cgcccagggg atcacctcgg
     3001 tggtgagcac ggcgcggacc ccgatctcct cgcagatggc cagcagcagc gcgttgacac
     3061 cggtcgagtc ggcgctggtg agctcggtga tgttgccgac ccccatcagc tgggcggttg
     3121 tcgggtatcg ccggtggacc tcggcgtacc gttcgagcga cgccatgaag ccgaagccga
     3181 tcggctcgat gaccgggtcg atcagatacc gaacgttcca gcgttccagc gactcgatgc
     3241 tccgatcgag ggtatccagc ccctcgccga agtccggaat caccgccacc cgcacatcgg
     3301 taccgcccag ctcgcgggcg acctccagat tggacttgtt gacgctgagc accagctcgg
     3361 cgcccgcctc aaccgcggtg aggatctccc ccggctcgaa gctgtccagg ctgacccgca
     3421 ttcccgcctc gcgcagctcg cgcacggtgg agcccagctc ggggaaggga aggccaggag
     3481 tgcagccgat atcgatgaga tccgcgccgc tggcgcgaaa gtagtccgcc gccgcacgga
     3541 actgcgtggg cgagagcttc ggggcgttgt tgatctcggc gagaatctcg atggagtagg
     3601 agccatagtt ctgcccggcc gcggcctggc cgaagtagcg ggggatctcc cggagatcct
     3661 tgggaccctt ctcagtcctg accccgaact tctcgctgag aatcgcaggg tgaccctcgc
     3721 agaggccggg tatcagaatc aggtcggtct cggggggtac ttcgagaaac cgggtg
//
LOCUS       DASYRV010000562         5808 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3467409, whole genome shotgun sequence.
ACCESSION   DASYRV010000562 DASYRV010000000
VERSION     DASYRV010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5808
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3467409"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(152..225)
                     /locus_tag="VGQ24_14885"
     tRNA            complement(152..225)
                     /locus_tag="VGQ24_14885"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(189..191),aa:Met,seq:cat)
     gene            complement(350..649)
                     /locus_tag="VGQ24_14890"
     CDS             complement(350..649)
                     /locus_tag="VGQ24_14890"
                     /inference="COORDINATES: protein motif:HMM:NF016839.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HEV8456183.1"
                     /translation="MTLGRWAAIAGLVFGLYFALQGGEYGTLDLLQLRREEAEERANL
                     ERLHRMVDSLSRVATAIEHNPRVQERVAREKFGMLRKGEFLYRLVPSEKEVRGEQ"
     gene            complement(646..1926)
                     /gene="eno"
                     /locus_tag="VGQ24_14895"
     CDS             complement(646..1926)
                     /gene="eno"
                     /locus_tag="VGQ24_14895"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016387099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEV8456184.1"
                     /translation="MSTIIEVHAREILDSRGNPTVEAEVVLSSGAQGRAAVPSGASTG
                     EHEAVELRDGDAKRYGGKGVTEAVRNVNEVLGPRLEGRAATDQIEIDAEMMDADGTPN
                     KSKLGANAILSVSMAVARAAAQDTGLPLYRYLGGPMARVLPVPMMNILNGGAHSSNNV
                     DAQEFMVVPIGADTFPDGLRMGVEVFHALKKVLTKMSLSTAVGDEGGFAPMLPSNEAA
                     LDVVMQAIKAAGYEPGQDVAIALDVAASELYQDGEYVFKKGDGSRRPAEAMVDLYAGW
                     VDRYPIVSIEDGLAENDWTGWALLTERLHERVQLVGDDLFVTNVDRLGRGIEEGVGNA
                     VLVKVNQIGTLTETLQCIELAKGSAYGVVISHRSGETEDTFIADLAVATGAGQIKTGS
                     ASRTDRTAKYNQLLRIAEELGDLAHYPGREIYPL"
     gene            complement(2010..2993)
                     /gene="thiL"
                     /locus_tag="VGQ24_14900"
     CDS             complement(2010..2993)
                     /gene="thiL"
                     /locus_tag="VGQ24_14900"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR01379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HEV8456185.1"
                     /translation="MSPSSPNPVQGSALGPGAEFDRIRGIMRLLGDRAAGLGDDCGLI
                     REGDEFFALSTDVSVERVHFRLDWIGLREVGWRATAAALSDLAAEGAEPVGLLSAVTM
                     PSGTGEPELLELMSGVGAAAGFARAPVLGGDLSTGPVWSLAITVVGRTRAPITRAGAQ
                     PGDRLWVTGALGGARAALEAWRRNEEPSSEARARFAHPEPRIAAGRWLVRHGAHAMID
                     LSDGLGGDARHLAAASRVQVEIDLEALPIATGVPGQAERLRISPGEFAAESGEDYELL
                     VALPSRFDGSDAFVRECGIGLARIGTVGEGSGARFLSAGKEIGLKGFDHFG"
     gene            complement(2990..4555)
                     /locus_tag="VGQ24_14905"
     CDS             complement(2990..4555)
                     /locus_tag="VGQ24_14905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456186.1"
                     /translation="MRCHFQMLALALASSAQAQSFTRDWRPEDRTVVGDFSRVTAIAT
                     SSDRVFITSPTGLLIWNPQFQRWEGSIEPPDRALLARVFTALADPLDNSLWLARPDGW
                     VHYQPDIQLWDQGTVPEGLLGIAFDQSDPAAGLYLRTRGDWELLSRGGVVSTPTRPPA
                     RPITPATVEQAIRSNPTLQANAAAILTDNRLRNVRYTAAARSYDNRGWYLGTSGIGTL
                     FMPDGAGLPEPLTFGLPSDRVGAVFSWPGGVWAATNRTAATDASFTFVGQELGEFKTV
                     PGPSAVGTPFNQVRELAGQNRSVWAATDQGLGRVDPADGRVELVGESKGLPDSRVYSV
                     VSRQGRITVGTAHGLARVSDSLQVERLAPSYSDAVYSVLPFGDSVWVGTPAGLLLSLP
                     GQSGVVRPDGLASPSLQAPVVDLAPLADTVVALTRDALLWRNPRSRAWTLGPNLSALL
                     GRLRRFVAEGPGFWVAGDQGVGYVGLNTPPLRPIREGDLPGVVNDLAVDDQYLWVATD
                     GGLVRFRLNAVRQ"
     gene            complement(4594..>5808)
                     /locus_tag="VGQ24_14910"
     CDS             complement(4594..>5808)
                     /locus_tag="VGQ24_14910"
                     /inference="COORDINATES: protein motif:HMM:TIGR00196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEV8456187.1"
                     /translation="WPTIGIAIDALLGTGASGAPRPAVAALLARVLDLEIPILAIDGP
                     TGVDLLTGIVHGSARADVTVTFGAFRRGHLLARDEVGSIVVTDIGHPPPDPGWPIVVT
                     DHQAAEWLRRFRARDHKGERGRVVIVGGSAGMTGALRLAARAAFGAGAGLVHAVAPPE
                     TIAVLVQAEPDVQTLAHPFDQPLSRALLDLVARADALVIGPGLGRDPGRRALVTALVE
                     VARSAVIDADALVAFAGAASELAALSAKKRVVLTPHPGEFRTLFPELASVRELDPWAA
                     AASAAEASGATILLKGVPTVIASRRPPVLTVIAGNPGLATGGSGDVLSGLVGTALAHE
                     LEPQSAAGLGAQALGRAADLAARRQTARSLRPMDVVQALPDLWREWEVLRAAQPAPRP
                     PILFEQPHPQTF"
BASE COUNT         1042 a         1991 c         1864 g          911 t
ORIGIN      
        1 atcgatgacc aaggaggatg cagtcgccac catggaggac tgccagcatt ggtggcgccc
       61 ggacgtgtat cgcgcttttc ttcgatcgat ttgaatcctg ccttcagcaa agaaccccgc
      121 aactcactgg ggagcgcggg gtttcaggtg atagcagggg cgggactcga acccgcgacc
      181 ccggcattat gagtgccgtg ctctaaccag ctgagctacc ctgccgtctt ctcaaaaacc
      241 gtgagcggta agtcgtgagc agtaagcggg aactgcccca ccactgtagt cccttggcag
      301 aggtaaaaat aatacctcga ggcggtttcc tgctcatccc gcttaccgcc tactgctcac
      361 ctctcacctc tttttcggac ggcaccagtc gatacagaaa ctcccccttc ctcagcatcc
      421 cgaacttctc ccgcgccacc cgctcctgca cccggggatt gtgctcgatg gccgttgcga
      481 cccgggagag cgagtccacc atccgatgaa gccgctcgag gttggcgcgc tcctccgcct
      541 cttcccggcg gagctggagc agatccaggg tcccgtactc cccaccctgg agtgcgaaat
      601 agagaccaaa gacgaggccc gcgatagcag cccaccgccc cagggtcaca gcgggtagat
      661 ctcccggcca gggtagtgag cgagatctcc cagctcctcg gcgatccgca gcaactggtt
      721 gtacttggcc gtgcggtcgg tgcggctggc gctgcccgtc ttgatctgtc cggcgccggt
      781 cgccaccgcg agatcggcga tgaacgtgtc ttcggtctcg ccggagcgat gagatatgac
      841 cacgccgtag gcactgccct tggccagctc gatgcactgg agcgtctcgg tcagggtgcc
      901 gatctgattg acctttacca gcaccgcatt gccaacgcct tcctcgatac cgcggccgag
      961 tcgatccacg ttggtgacga agagatcatc cccgacgagc tggacccgct cgtgcagccg
     1021 ctcggtcagc agcgcccagc cggtccagtc gttctccgcc agtccgtcct cgatcgacac
     1081 gatggggtaa cgatccaccc atccggcgta caggtcgacc atggcctctg ccgggcggcg
     1141 gcttccgtct cccttcttga agacgtactc gccgtcctgg tacagctccg acgccgctac
     1201 gtccagcgcg atggccacat cctggcccgg ctcgtacccc gccgccttga tcgcctgcat
     1261 gaccacgtcg agagccgctt cgttggacgg cagcatcggc gcgaaccccc cttcgtcgcc
     1321 cactgcggtc gagaggctca tcttggtcag taccttcttc agcgcgtgga agacctcgac
     1381 ccccatgcgc aacccgtcgg gaaaagtgtc ggccccaatg ggaacgacca tgaactcctg
     1441 ggcatcgacg ttattggaag agtgcgcccc accgttcagg atgttcatca tcggaaccgg
     1501 cagcacccgg gccatcggtc cgccgagata gcgatagagc ggcagcccag tgtcttgggc
     1561 cgccgccctt gccacagcca tggagacgct caaaatcgcg ttggcgccga gcttgctctt
     1621 gttcggtgtg ccgtcggcat ccatcatctc ggcgtcgatc tcgatctgat cggtggcggc
     1681 ccggccctcg agccgaggac ccaggacctc gttgacgttg cgcaccgcct ccgtcacgcc
     1741 cttacccccg tagcgcttgg cgtcgccatc gcgcagttcg accgcctcgt gctctccggt
     1801 ggaggcgccg ctcggcaccg ccgcgcgccc ctgggcgccg ctcgacagga ccacttcggc
     1861 ttcgacggtg gggttaccgc ggctatcgag aatttcccgg gcgtgcactt cgatgatggt
     1921 ggacatgttc tccggcgtcg atgatcaaag tcgacaatga aagagcctgt ggaatgcggg
     1981 accgaagcta gccgagtagc cccgattcct caaccgaagt gatcgaaccc tttcaggccg
     2041 atttcctttc ctgccgagag aaaccgggca ccactcccct cccccacggt accgatcctg
     2101 gcgagtccga tcccacattc ccgaacgaat gcatccgacc catcgaaccg ggacggaagc
     2161 gccacgagaa gctcatagtc ttcgccagat tccgcggcga actcccccgg tgagatccgt
     2221 agccgttccg cctggccagg aacgccggtc gcgatcggaa gtgcctcgag atcgatctcg
     2281 acctggaccc gcgaggcagc agcgaggtgc cgcgcgtccc ctccgagccc atcgctcagg
     2341 tcaatcatgg cgtgcgcgcc gtgccggacc agccaccggc ccgcggcgat cctcggctcc
     2401 gggtgagcga agcgcgcccg tgcctcggag gagggctcct catttcttcg ccacgcctcc
     2461 agggcggctc gcgcgcctcc aagggcaccc gtcacccaga gccggtcacc cggttgagcc
     2521 ccggcgcgag tgattggcgc acgggtgcgt cccaccaccg tgatcgcaag gctccacacc
     2581 gggccggtgg agagatctcc gccgagcacc ggagcgcgcg cgaacccggc cgcggcacca
     2641 acacccgaca tcaactccag cagctcgggc tcaccagtac cggacggcat cgtcacggcg
     2701 gagagcagcc ccaccggctc tgcgccttcg gcggcaagat cggaaagcgc cgccgccgtc
     2761 gctcgccaac ccacttctcg cagaccgatc caatcaaggc ggaagtgcac ccgttccacg
     2821 ctgacgtcag tgctgagggc aaagaactcg tcaccctctc ggatcaagcc gcagtcgtcg
     2881 cccagtcccg cagcccggtc accgagcagc cgcatgattc cgcgaatccg gtcgaattcg
     2941 gcgcccgggc caagtgcgga gccctgcact gggttcggcg aactagggct cactgacgaa
     3001 cggcattgag ccggaagcga accaggccac cgtcggttgc cacccagaga tattgatcat
     3061 ccaccgcgag atcgtttacc accccgggga ggtcgccctc ccgaatcgga cgaagtggtg
     3121 gagtgttgag gcccacgtac cccactcctt ggtcgccggc cacccagaag ccaggcccct
     3181 ccgccacaaa ccgacggagc cggccgagca gcgccgacag attgggcccg agcgtccagg
     3241 cacggctcct gggattgcgc cagagcaagg catcacgggt gagggccacg accgtatcgg
     3301 ctaatggcgc gagatcgacc acgggcgcct ggaggctggg cgaggcaagt ccatcgggtc
     3361 ggaccacgcc cgactgccca ggtaaggaga gcagcagccc ggccggggtc ccgacccaca
     3421 cggaatcccc gaacggcaac acgctgtaga cggcatcgct gtacgacggc gcgagccgct
     3481 ctacctgaag cgagtcgctg acccgggcca ggccatgcgc ggtgccgacg gtgatgcgtc
     3541 cctgccggga gacgaccgaa tagactcggc tgtccggcag ccccttgctc tcaccaacca
     3601 gctcgacccg cccgtccgca ggatcgacgc gcccgagtcc ctggtcggtt gccgcccata
     3661 ccgagcgatt ctgaccggcg agctcgcgta cctggttgaa tggcgtgccc acagccgaag
     3721 gaccgggaac ggtcttgaat tcaccgagct cctgtcccac gaaggtgaag gaggcgtccg
     3781 ttgccgctgt tcgattcgtg gccgcccaca cgccgccagg ccaactgaac acggcaccca
     3841 ccctatcgga tggaagcccg aacgtgagcg gctcgggaag ccccgcccca tcgggcatga
     3901 agagggtgcc gatccccgac gttcccagat accaacctcg attgtcgtag gatcgggcag
     3961 cggcggtgta gcggacgttg cgcagccgat tgtcggtgag gatcgccgct gcattcgcct
     4021 ggagggtcgg gttgctgcgg atggcctgtt ccaccgtcgc gggcgtgatc gggcgagccg
     4081 gcggccgggt aggtgtagag acgacgccac cgcgtgacag cagctcccag tccccccgag
     4141 tccgaaggta gagacccgcg gccggatcgc tctggtcgaa tgcaatcccg agaaggccct
     4201 cgggcaccgt accttggtcc cagagctgga tgtcgggctg gtagtgcacc caaccgtccg
     4261 gccgggcgag ccagagcgag ttgtcgagcg ggtcagccag tgcggtgaaa acgcgggcga
     4321 gtagggctcg gtcggggggc tcgatcgagc cttcccaacg ctggaactgc ggattccaga
     4381 tgagcagccc ggtgggtgag gtaatgaaca cgcgatccga agatgtggcg atcgcggtaa
     4441 cccggctgaa gtcgcccacg accgttcgat cttcgggacg ccagtcgcgg gtgaacgact
     4501 gcgcctgggc tgaggatgca agcgcgagag ccagcatctg gaagtggcaa cgcatcagga
     4561 aaatctacat ggatcagttg gcaggcggcg cggctagaac gtttggggat gtggctgctc
     4621 aaagaggatc ggtgggcgtg gcgccggctg ggctgctcga agcacctccc actcgcgcca
     4681 gaggtccggc aacgcctgca caacatccat cggtctgagg cttcgtgcgg tctgccggcg
     4741 ggccgccagg tcagcggcgc ggccaagggc ttgcgcgccg agcccggcgg ccgattgagg
     4801 ctcgagctcg tgcgcgagag cggttccaac gaggccgctc agcacatcgc cgctgccgcc
     4861 agtagccaga ccgggatttc ctgcaatgac cgtgaggacg ggcggcctgc gggaggcaat
     4921 caccgtcggt acacccttca ggagaatggt ggcgcctgac gcttcggcgg cactggccgc
     4981 cgctgcccag gggtcgagct cccggaccga cgcaagctcg ggaaagaggg tacgaaactc
     5041 tccgggatga ggtgtcagta ccactcgttt cttggccgat aatgcagcca gctcggacgc
     5101 agcgccggcg aacgcgacca gtgcgtcggc gtcgatcacc gcggagcgag caacctccac
     5161 cagagccgtc accagggcgc ggcgccctgg gtcccgacca aggccgggac cgatcacgag
     5221 ggcgtcggcg cgagcgacga gatcgagcaa ggcgcgcgag agaggctggt cgaacggatg
     5281 ggcgagtgtc tgcacgtcgg gctcggcttg caccaggacg gcgatcgtct caggaggggc
     5341 caccgcgtgc accaggccgg cacccgcacc gaaggccgcg cgggccgcga gccgcagcgc
     5401 gccggtcatg ccggcgctgc cacccacgat cacgaccctg ccgcgctcgc ccttgtggtc
     5461 gcgggcccga aaccggcgca gccactcggc tgcctgatga tcggtcacca cgatcggcca
     5521 gcccggatcg ggtggcgggt gaccgatatc ggtcaccacg atggaaccga cttcatcacg
     5581 agccaggagg tggccgcggc ggaaggcgcc gaacgtcacg gtcacatcgg cgcgagcaga
     5641 cccgtggact atgccggtca atagatccac tccggtcggt ccatcgatcg ccaggatcgg
     5701 tatctcgaga tcgagtactc gggccaggag ggccgctacg gccggacgtg gtgcacccga
     5761 cgcgccggtg ccgaggagag cgtcgatggc gatgccgatg gtgggcca
//
LOCUS       DASYRV010000563         3689 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1165754, whole genome shotgun sequence.
ACCESSION   DASYRV010000563 DASYRV010000000
VERSION     DASYRV010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3689
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1165754"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(353..1201)
                     /locus_tag="VGQ24_14915"
     CDS             complement(353..1201)
                     /locus_tag="VGQ24_14915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456188.1"
                     /translation="MRLRDYNRSGALSDERAKGLGLKARIAGATAVAVVLIAGGATLA
                     IKGRAAAVPTNPDTLCPTQRPPSEITVILLDVSDRISEPQRLQIQNQLSRLRDSIPRF
                     GLVEVYTVDRLRRRVTEPVSHLCNPGTGADLSKIYQNPQLAKKKWDSFAAKLRTDINH
                     QIEAPAHATSPIFEAIQATALRTFGKPDYDGLPKHLVIVSDLLQHVPGGLSMYEGVPS
                     FESFKNTPYFSRVRSDLEGVSVLVYYLVRPGVKEQDRKHIGFWEEYFQAQGADVESVD
                     KVFGDK"
     gene            complement(1188..2615)
                     /locus_tag="VGQ24_14920"
     CDS             complement(1188..2615)
                     /locus_tag="VGQ24_14920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456189.1"
                     /translation="MGKPEGALPSIPTFPPLDVEQIARELRLEERAEKAAMAGQPAPD
                     ADGPDSAELDVLGKIEACARKACEDYLTQRDIYEARIQKSAITPDLQVQIEAAGASAL
                     ADFRAEIINDQNQLHTLLRSVGSLEDEFGEFRERHCLTRLPKNISKGERTFALMLLVV
                     FVLLESILNGMFFAEGSEAGLIGGVVQALVLSVLNVGVAALYAVYGLPLLFHRRGGVK
                     LIGVLVTLLFALWLGGLNLAIGHFRDMFIAGAGKVQMAELLNRLTTAPLLLGDAKSAI
                     LVLLGIALGLLAVIDVAATRELYPGYGSLGRERQRAVDHYAEENARSLAAMMQLRDQT
                     VDDLSSAIELIRGSQFEMQQAIEGRTRLHHNLRAYFEHLAVAHERLIQRYRECNRRVR
                     RGDAPLYFRSPPARPSFVDPPVLSSVPAQELDARPEVIARIDYYIKAINEKFEQTMPE
                     YQTVGQLATLGSMERAPESMERATA"
     gene            2865..>3689
                     /locus_tag="VGQ24_14925"
     CDS             2865..>3689
                     /locus_tag="VGQ24_14925"
                     /inference="COORDINATES: protein motif:HMM:NF021942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070009 - serine-type aminopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HEV8456190.1"
                     /translation="MRGIRIGTLVGTLGLLLVAFQTAVGQVTTPAEIETKLPPGYIKE
                     FGTMWTFEAPPFDYWKARYGFSPTKEWLDHVRLASIRLPNCSSSFVSSRGLVMTNHHC
                     ARECITAVSTPDSNFQELGLVAKTQAEERKCPGLYVDQLQSIEDVTDPIQKAVTARAP
                     ATQVAQRNAAIGAIEKSCGEEAGVQCQVVTYYQGGIYSLYRFKRFDDLRLVMAPEEAI
                     SFFGGDPDNFTYPRYDLDLSLVRVYENGRPAQPKDYLKWSKEGAKEGDVVFVTGNPG"
BASE COUNT          650 a         1233 c         1168 g          638 t
ORIGIN      
        1 gggaaaccgc gcggggcgag cggaccgcga agacggggcc gttgccacgc gtcgccggca
       61 cggaggttcc atcccagaac tcgatggcga aaggacgttc aggaaagcag ctctcgatct
      121 tccgtcggag tggtgccgtg cccatgaggg cagtcatcgc gagcggcctt gagcctgccc
      181 tgagcgcagc gaagggtggc gatccggcgg ctccccggcg actggattgc ttcggatgct
      241 gtgcgtcctc gcaatgactt cgggaggtag gccccctcgc attgacaact ttagctaccc
      301 ctcaggtgac actgcattgt gtaccgccgt accgccgtac cgccttaccg cctcatttgt
      361 cgccaaagac cttgtccacc gactccacat cagcgccctg cgcctgaaag tactcctccc
      421 agaacccaat atgcttccgg tcctgctcct ttaccccggg ccggaccaga tagtagacca
      481 ggaccgacac gccctccaga tcggaccgta ccctcgagaa atacggcgtg ttcttgaatg
      541 actcgaacga gggaactccc tcatacatgc tgagcccgcc cggcacgtgc tgcagcaggt
      601 cggagacgat caccagatgc ttgggcagcc cgtcgtagtc cggcttgccg aacgtcctca
      661 aggcagtggc ctggatcgcc tcgaagatgg gcgacgtggc atgcgccggc gcctcgatct
      721 gatggttgat gtcggtccgg agcttggcgg cgaagctatc ccactttttc ttggcgagct
      781 gggggttctg ataaatcttg ctgaggtcgg cgccggtgcc gggattgcac aggtggctga
      841 ccggctcggt cacccgccgc ctgagccgat caaccgtgta gacctcgacc aggccgaagc
      901 gaggaatgct gtcgcgaaga cgggacagct gattctggat ctggagccgc tggggctcgg
      961 agatccggtc cgagacgtcc agcagaatga ccgtgatctc cgagggcggc cgctgggtgg
     1021 ggcagagtgt gtctgggttg gtcggcaccg ccgcggccct acccttgatc gcgagggtcg
     1081 ccccgcctgc tatcaggacc accgcgactg ccgtggcacc ggcgatgcgc gccttgaggc
     1141 cgagcccctt ggctcgctcg tcggagagcg ctccacttcg gttgtagtca cgcagtcgca
     1201 cgttccatgc tttccggcgc ccgttccatg cttcccaacg tcgccagctg cccgaccgtc
     1261 tgatactcgg gcatggtctg ctcgaacttc tcgttgatcg ccttgatgta gtagtcgatc
     1321 cgcgcaatca cctcgggacg ggcgtcgagc tcctgggcgg gcacggacga caagaccggc
     1381 ggatcgacga acgaggggcg cgccggcggg ctccggaagt agaggggtgc atcccctcta
     1441 cgtacccggc gattgcattc ccggtagcgt tggatcaatc gttcatgcgc cacggccaag
     1501 tgctcgaaat aggcccggag gttgtggtgc agccgggtac gcccctcgat cgcctgctgc
     1561 atctcgaact gggagccgcg aatcagctcg atggccgagc tcaggtcgtc caccgtctgg
     1621 tcccgcagct gcatcatggc cgcgagcgat ctggcgttct cctcggcata gtgatcgacg
     1681 gcgcgctgcc gctcgcgtcc cagcgagcca taaccgggat agagttcgcg ggttgccgcg
     1741 acgtcgatga cggccaacag tcccaaggcg atgcccagca gcaccaggat cgcggacttg
     1801 gcgtcgccca ggagcagtgg cgccgtcgtc agccgattca acagctcggc catctggact
     1861 ttgccggcgc cggcgatgaa catgtcgcgg aagtggccga tggcaaggtt gaggccgccc
     1921 agccagagag cgaacagtag ggtcaccagc acgccgatga gcttgactcc tccccggcgg
     1981 tgaaacagaa gtggcaggcc gtacaccgca tacagggcgg cgacgcccac gttcaggacc
     2041 gacaggacca gcgcctgcac gactccgccg atgagccccg cctcgctgcc ctccgcgaag
     2101 aacattccgt tgaggatcga ttccagcagc acgaacacga ccagcagcat gagggcgaag
     2161 gtccgctccc ccttcgagat attcttggga aggcgggtga ggcagtgccg ttccctgaac
     2221 tccccgaact catcctccag gctgcccacc gaccggagca gagtgtggag ctggttctga
     2281 tcgttgatga tctcggccct gaaatccgcc agggcgctcg cgcccgcggc ctcgatctgg
     2341 acctgcaagt ccggggtaat cgccgacttc tggatccgcg cctcgtagat atcccgctgc
     2401 gtcaggtagt cctcgcacgc cttccgggcg caggcctcga tcttccccag cacgtcgagc
     2461 tccgccgagt ccgggccgtc ggcgtccggc gccggctggc cggccatcgc cgccttctcg
     2521 gcccgttcct ccagccgcag ctcccgggcg atctgttcca cgtccagggg agggaacgtg
     2581 gggatgctgg gcagcgcccc ctcgggcttt cccatggtcg ctgcgactaa ttcccgaacg
     2641 gattttggca tgagggccct ggtacccgac cactgcagcg gcacaaacca cggagatcca
     2701 gcctatgcta aggtgtcgaa acagcgcgca cggtgcgccg ggtcacatgc gggattgctt
     2761 cgggcgcttc acgccctcgc aatgactcac acctctcggc tacattcccc gcgccgtgga
     2821 ttggcggcaa ttgggccagc tcaacgaccg aaaaggggta aagcatgcgc ggcatacgaa
     2881 ttggaacgct ggtgggaacg ctcggcctct tgctggtcgc atttcaaact gcagtcggcc
     2941 aggtgaccac cccggccgag atcgagacca agctcccgcc gggctacatc aaagagttcg
     3001 gcaccatgtg gaccttcgag gcgccgccgt tcgactactg gaaggcgcgc tacgggttca
     3061 gtccgaccaa ggagtggctg gatcacgtcc gcctcgcctc gattcgcctg cccaactgct
     3121 cctcctcgtt cgtgtcctcc cgcgggctgg tcatgaccaa ccaccactgc gcccgggagt
     3181 gcatcaccgc ggtctccacc ccggactcga acttccagga gctcggcctt gtcgccaaga
     3241 cccaggcgga ggagcggaag tgccccggcc tctacgtgga ccagctccag agcatcgagg
     3301 acgtgaccga tcccatccag aaggcggtca ccgctcgagc ccccgcgacc caggtggccc
     3361 agcgcaacgc cgcgatcggc gcgatcgaga agagctgtgg tgaggaggcc ggcgtccaat
     3421 gccaggtcgt cacctactac cagggcggca tctactcgct gtaccgattc aagcgcttcg
     3481 acgatcttcg cctggtcatg gcgccggagg aggcgatcag cttcttcggc ggcgaccccg
     3541 acaacttcac ctacccgcgc tacgacctcg acctgagcct ggtgcgggtg tacgagaacg
     3601 gccggccggc ccaacccaag gactacctga agtggagcaa ggagggggcg aaggagggcg
     3661 acgtggtgtt cgtgaccggc aaccccggc
//
LOCUS       DASYRV010000564         3193 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3866956, whole genome shotgun sequence.
ACCESSION   DASYRV010000564 DASYRV010000000
VERSION     DASYRV010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3193
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3866956"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..650)
                     /locus_tag="VGQ24_14930"
     CDS             complement(<1..650)
                     /locus_tag="VGQ24_14930"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEV8456191.1"
                     /translation="MAKIDVIMPQMGESIAEGTLSRWIKKVGEAVKRDEPIFEISTDK
                     VDAEIPAPSAGVLAEILVQEGQTVAVQTVVARIETDASAGAAEKKAPAAPSSGAPAPA
                     KPATPAGAPPAPLAPAPSKAPRSSGDTAAAPPSSRPVPAAASPASMAETRSVGDATGG
                     NGAAETAEERLKRKSTPLVRKMAAEHNVDISTIPGTGLAGRVTKNDITSYIESGAAG"
     gene            complement(769..1746)
                     /locus_tag="VGQ24_14935"
     CDS             complement(769..1746)
                     /locus_tag="VGQ24_14935"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF006667.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HEV8456192.1"
                     /translation="MAETTYLEAIRQGLFEEMERDPEVICLGEDIGAYGGAFKVTEGL
                     QSRFGERRVIDTPLSEAAIVGAAAGAAHMGLRPVCEMQFIDFISCAYDMLTNYVATAR
                     YRAFLPCPMVVRGPSGGYVRGGPFHSQNPEAAFLHTPGLKIVYPATASDAKGLIKSAI
                     RDDDCVLFFEHKYLYRRIKEELPQGDHLVPIGKARLAREGRDLSIITYAATVWKSLEA
                     AEQLQREDGLSVEVLDLRSLLPMDDEAIAETVKKTNRVLIVHEDTVTGGVAGEIAARI
                     NDLAFEWLDAPIKRVAAHDVPLPYAPQLEDFVLPQTADIVKAARWLAGY"
     gene            complement(1739..2845)
                     /locus_tag="VGQ24_14940"
     CDS             complement(1739..2845)
                     /locus_tag="VGQ24_14940"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HEV8456193.1"
                     /translation="MAVTSARASDRGALPALTREQLLELYYYMRLTRSLEERLVNLYR
                     QTKVVGGLFRSLGQEADAVGSAYALDRSKGDVLSPLIRNLGSMLVQGATPLEILRQYM
                     AKGDSPTRGRELNIHFGDTVRGFIGQISHLGDMVPVMAGVTLSFKLRGQDRVGMVYVG
                     DGATSTGAFHEGINFAAVQRCPLVVIVENNGYAYSTPTGKQTACTSFKDKAIGYGIPG
                     VQADGNDVLATYQVTKEAVDRARRGEGVTLIELLTYRRKGHAEHDNQSYVPPGEIDRW
                     ARENDPVDRYIQELTGRAGVSTEELERIDARVTAEIDRATDEAEASPAPEPSDSLRGV
                     YADPARAPALWYREGVRSAVEVHERPASWGTHDG"
     gene            complement(2907..>3193)
                     /locus_tag="VGQ24_14945"
     CDS             complement(2907..>3193)
                     /locus_tag="VGQ24_14945"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEV8456194.1"
                     /translation="RLDVLVAPTGNPAWPTDLVNGDHFTGSSSTPAAVAGYPSISVPM
                     GFAYGLPVNLSFFGRAWSEPTLLRAAYAYEQTSKHRRPPGFLPTATLAPA"
BASE COUNT          511 a         1072 c         1042 g          568 t
ORIGIN      
        1 cccgccgccc cgctttcgat gtagctcgtg atgtcgttct tggtcacccg gccggcaagc
       61 ccggtgcccg ggatcgtgct gatgtccacg ttgtgctcgg ccgccatctt gcgcaccagc
      121 ggagtggact tgcgcttcaa gcgctcctct gctgtctcgg ccgcaccgtt gccgccagtc
      181 gcgtcgccca cggaccgagt ctcggccatc gaagcaggag acgctgcggc ggggacggga
      241 cgggaagatg gcggagccgc agcggtgtcg cccgagctcc ggggagcctt cgacggggcg
      301 ggtgccagtg gtgctggagg agccccggcc ggggtggcgg gcttcgctgg agccggagcc
      361 ccggaagaag gtgcagcggg ggccttcttc tcggcggccc cggcgctcgc gtcggtctcg
      421 atccgggcta cgacggtctg aaccgcgacc gtctgcccct cctgcaccag gatctcggcc
      481 agcactccgg cactgggagc cgggatttcc gcgtccacct tatcggtaga gatctcgaag
      541 atcggctcgt cccgtttgac cgcttctccc accttcttga tccagcggga cagcgtgccc
      601 tcggctatgg actcgcccat ctggggcatg atgacgtcta tcttggccat acgaatctcc
      661 gattcggcgg ggccgcgggg cagcgggacg gcagggcagt tcttgcaggc cagcccttat
      721 ctttacccaa ggtaactgcc ccgctgccca tctgccccgc cgccccgctc agtaccccgc
      781 cagccacctc gccgccttca cgatatccgc cgtctggggc agcacgaaat cttcgagttg
      841 tggcgcgtag gggagcggca cgtcgtgggc tgcgacccgc ttgatcgggg catccagcca
      901 ttcgaaggcc agatcgttga tccgcgcggc gatctcgccg gccactccgc cggtgaccgt
      961 atcctcgtgg acgatgagca cccgattggt cttcttgact gtctcggcga tggcctcgtc
     1021 atccatcggc agcagggagc gcaggtccag cacctccacc gagaggccat cctcccgttg
     1081 gagctgctca gccgcctcga gtgatttcca gaccgttgcc gcataggtga tgatcgagag
     1141 gtcgcgtccc tcccgcgcca gccgcgcctt gccgatcggc accaggtgat cgccctgggg
     1201 cagctcttcc ttgatccggc ggtagagata cttgtgctcg aagaagagca cgcaatcatc
     1261 gtctcgaatc gccgacttga tcagaccctt ggcatcgctc gcggtggcgg gatagacgat
     1321 cttcaggccg ggagtgtgga ggaatgcggc ctcgggattc tgcgagtgaa acggcccgcc
     1381 gcgcacgtag ccgccgctcg ggccgcgcac caccatgggg catggtagaa acgcgcggta
     1441 gcgggccgtg gccacgtagt tggtgagcat gtcataggcg cacgagatga agtcgatgaa
     1501 ctgcatctcg cacaccggcc gcaggcccat gtgagcggcc ccggcggccg ctcccacgat
     1561 cgcggcttcc gagagcggcg tatcgatgac ccggcgctcg ccgaagcggg attgaagccc
     1621 ctccgtcacc ttgaaggcgc caccgtaggc cccgatgtcc tcgcccaggc agatgacctc
     1681 gggatcccgt tccatctcct cgaatagtcc ctggcggatg gcctcgagat acgtcgtctc
     1741 agccatcgtg ggttccccag ctggcgggac gctcgtgtac ctctaccgcc gaccgcacgc
     1801 cctcacgata ccacagcgcg ggcgcgcggg ccggatcggc atagacgccg cgcaaggaat
     1861 cgctcggctc cggcgccggc gacgcctccg cctcgtcggt ggctctatcg atctcggccg
     1921 tcacccgtgc gtcgatccgc tcgagctcct cggtcgaaac accagctcgg ccggtcagct
     1981 cctggatgta gcggtccacc ggatcgttct cccgggccca gcggtcgatc tccccgggag
     2041 ggacgtacga ctggttatcg tgctccgcgt ggcccttccg cctgtaggtc agcagctcga
     2101 tcagggtgac accctcaccc cgcctggccc ggtccacggc ctccttggtc acctggtacg
     2161 tcgcgagcac gtcattccca tcggcctgaa cacccgggat gccgtagccg atcgccttgt
     2221 ccttgaagct ggtacaggcg gtctgtttgc cggttggcgt ggaatacgcg tagccgttgt
     2281 tctccacgat cactaccagc gggcagcgct gcaccgcggc gaagttgatg ccttcgtgga
     2341 acgccccggt cgatgtggcc ccatcgccca cgtagaccat tccgacacgg tcctggccgc
     2401 gcagtttgaa cgagagggtc actccggcca tcacgggcac catatcgccc aggtgggaga
     2461 tctggccgat gaagccgcgc actgtgtcgc caaagtggat attgagctcg cggcctcggg
     2521 tcggcgagtc gcccttggcc atgtattgcc ggagaatctc caggggagtg gcgccttgca
     2581 ccagcatgga gccgagattg cggatcaggg gggagagtac gtcacccttg gagcggtcta
     2641 acgcgtaggc ggaaccgaca gcgtcggcct cctgcccaag cgagcggaac aacccgccga
     2701 ccaccttggt ctgtcggtag aggttgacca gtcgctcctc gagcgaccgg gtcaaacgca
     2761 tgtagtaata cagttcaagg agctgttccc gcgtcagagc cgggagcgcg ccccggtcag
     2821 aggcgcgagc gctggtgacc gccatgccag tcctggtcga aagtggatcc gtccgggcag
     2881 gaagatcgac ttcctggatg ggagaatcaa gccggggcga gcgtggccgt agggagaaaa
     2941 ccgggtggtc gccgatgctt ggaagtctgc tcgtacgcgt acgccgctct gagcagcgtg
     3001 ggctcgctcc acgcccggcc aaagaaggac agattcaccg gcaagccata ggcgaatccc
     3061 attggcacgc tgatactcgg gtaccccgcg accgccgcgg gcgtcgagct gctaccggta
     3121 aagtggtcgc cgtttaccag gtcggtgggc caggccggat taccagtggg tgcgaccagg
     3181 acgtccagcc tct
//
LOCUS       DASYRV010000565         5014 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3037115, whole genome shotgun sequence.
ACCESSION   DASYRV010000565 DASYRV010000000
VERSION     DASYRV010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5014
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3037115"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            359..709
                     /locus_tag="VGQ24_14950"
     CDS             359..709
                     /locus_tag="VGQ24_14950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456195.1"
                     /translation="MVPKLSSRQQAQLAYLELLTPKLQRIYSLVERMAGPKVDEAILR
                     GLGRLFDDIKGNAAALSLSGLAETAGRMGMLVRGGGGLPLKVRGLREMQGSLKMNYDA
                     ALRSANTPEEEVAE"
     gene            complement(720..887)
                     /locus_tag="VGQ24_14955"
     CDS             complement(720..887)
                     /locus_tag="VGQ24_14955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456196.1"
                     /translation="MSWLVLLFASIGAALILGALTFVSALIGVLITAMIILMCGPLID
                     RYLARRNRRSA"
     gene            993..1682
                     /locus_tag="VGQ24_14960"
     CDS             993..1682
                     /locus_tag="VGQ24_14960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456197.1"
                     /translation="MLRLHAVHFRALAVGGLCWGTSGLVAAQTSDSTTPSHHDHAVQG
                     GGVLPAGWSARPDGEGDLKSVKFVIMEPGYHLTLGPATILYREKDRANGPFHTLATFH
                     QMKKLEHAEGYGLFFGGESLTAGDQRYIYFLVRDDGKYLIKRRDGANTAEITRGWTAS
                     PAIKKGDAQGRATNLLEIDAKRDPTKVSFKVNGTTVHTADAKSMGTKGIVGLRANHNL
                     DLHVEGFAVHQ"
     gene            complement(1747..3078)
                     /locus_tag="VGQ24_14965"
     CDS             complement(1747..3078)
                     /locus_tag="VGQ24_14965"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEV8456198.1"
                     /translation="MRHTRRYLDLIAGQEMTTEEKRAFIAETVDSYEKYYNRGFVTYR
                     KSVTEAGQFAALEWSGEGSTLHDLLGREYIDCLGGYGIFSAGVNHPKVVKAVTNQLQR
                     MALNSQELLEPWRAALARVLAEVTPGELQNSFFINNGTDAIEGAIKLTRLYTKRNTFI
                     SALGGFHGKSMGSLSLMGKASFREPFQFGLQDVRFVPYGDADALEYEFQRCDAVGVRI
                     AGVVLEPIQGEAGGVVPPDDYFPRARELCTRYGALLIVDEIQTGMGRTGKMWGVDHWD
                     VAPDIMCMGKSIGGGVMPLSAFISTAKIWEVMIPNPIIHSTTFGGNPLACAAGLAAIQ
                     VTLEEDLPGQAAAKGEFLLRELGCLQQKYPQVLKEAHGKGLLIGMEFPAQEIGWQVAS
                     GLFKRGVLVAGTYSKAQVIRIEPALAISMDLLQEMLNRLEDTFREVAKRPA"
     gene            complement(3144..4301)
                     /locus_tag="VGQ24_14970"
     CDS             complement(3144..4301)
                     /locus_tag="VGQ24_14970"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0019808 - polyamine binding [Evidence
                     IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein"
                     /protein_id="HEV8456199.1"
                     /translation="MSKRKEVGRLVAQLERGGIPRREFVVRALGLGLSLSSVGALLQA
                     CQRKDKSAAGAPDSAGAGAVADLGPIEKELHIYNWSDYIADDTVPNFEKEFGVKVTYD
                     TYESNEEMVAKLQAGATGYDIVVPSGYIIPVMVATDMITPINKKYLTNFNNISPIFRN
                     LPTDPGNKHTVPWQWGTTGIAYRNDKVKPPVDSWAVFHDKQFGKKMTMMDDGREVIGA
                     MLRYRGHSLNSTNPAELSQAKADAIAAKKQLKAYISAPVKAQLISGDVWISQLWNGDT
                     AQARAEQPNLAYVIPKEGCTIWGDSMCVPKSAPNKRAAHEWMNYILRPEVGAALSEAT
                     GYGTPNAAAAKVMKNPVPYPTESELKRLEYQVDLGKDTATWDQIWTEIKSA"
     gene            complement(4353..>5014)
                     /locus_tag="VGQ24_14975"
     CDS             complement(4353..>5014)
                     /locus_tag="VGQ24_14975"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEV8456200.1"
                     /translation="GAAVRRIRRIRGAFELTTTKGTVKAREILAATNGYTPRALASLR
                     RRVIPIGSYQIATVPLDEEQARRLIPHNRVFSDTKHLLYYFRLSPDRRMVFGGRASFT
                     PTGTRRSAAILAAGMGEVFPELAGATIEYAWSGKVACPVDHLPHAGRLDGVHYSMGYC
                     GHGVALATYLGGRMGELLAGVGEIPDLGTSRFRAIPFYNGVPWFLPLVGGYYRVRDRL
                     G"
BASE COUNT          940 a         1582 c         1549 g          943 t
ORIGIN      
        1 tcggggaact cgcggaccga gagctgggtg tacccgatgg cgccaaacag caccagggcc
       61 aggctgagca tgctggccag caccggccgg cgaatcgaaa ggtccgagat tttcattgat
      121 tcagtcccgc gtcattgtca ggcacggtat tcacggtatc ggacgttgtg ctctatagtc
      181 ttgtcgttca agtgaccccg gaatcgacag cccgacccac cgtgaatggc ggctggaatc
      241 gggctcacat tggaaaagcg tcttcttact acggatgggc tcgatccagg attcagcctg
      301 agacactgcg gggagtggcg aatgcattag attctggctg ctcccaacct actcaacaat
      361 ggtcccaaaa ctttccagcc gccagcaagc ccagttggcc tatctcgagc tccttacccc
      421 gaagctccaa cggatttata gcctcgtgga gcggatggcg ggtcccaagg tggacgaagc
      481 catcctgcgg ggtcttggcc gcctgtttga cgacatcaag ggcaacgccg ccgcgctcag
      541 cctgagtggc ctggccgaaa ccgcgggccg gatgggaatg ctggtccgag gaggcggggg
      601 tctgccactc aaggtgaggg gactgcggga aatgcagggc agcctcaaga tgaactacga
      661 cgcggcttta cggtccgcca acacgccgga ggaggaggtc gccgagtgag gacggcggcc
      721 tacgccgacc ggcgattgcg cctggccagg taacggtcga tgagcgggcc gcacatcaga
      781 atgatcatgg cggtgatcag gaccccaatg agagcagaca cgaaggtcag cgctcccagg
      841 atgagagcag ccccgatcga cgcaaataga aggacgagcc aggacatcga accgtctccg
      901 gaagaggata ggtataggcg tcagtaggtt agtctgatcc ggcatccgct cgcaaccgtg
      961 atggacctta tcgaaagaac ctgaggtgat caatgctccg tcttcatgct gtccattttc
     1021 gggctctagc ggtcggcggc ctgtgctggg gcaccagcgg tctggttgcg gcccagacca
     1081 gcgacagcac caccccgagc catcacgacc atgcggtgca gggtggtgga gtactcccgg
     1141 ccggctggtc cgcccggccg gacggagaag gggatctgaa gagcgtcaag ttcgtcatca
     1201 tggaaccggg ataccacctc acactcgggc ccgcaacgat cctctatcgt gagaaggacc
     1261 gggccaacgg gcccttccac acgctggcca ccttccatca gatgaagaaa ttggagcacg
     1321 ccgaagggta tgggcttttc tttggcgggg agagcctgac cgccggagac cagcggtaca
     1381 tctacttcct ggtccgtgac gacggcaagt atctgatcaa gcgacgcgac ggggcgaaca
     1441 ccgccgagat caccaggggg tggacggcaa gcccggcaat caagaaaggt gatgctcagg
     1501 gccgagcgac gaatctcctg gagatcgatg ccaagcgcga tccgaccaag gtgagcttca
     1561 aggtcaacgg gacgaccgtg cacacggcgg atgccaaaag tatgggcacc aaggggatcg
     1621 tcggcttgcg ggcaaaccac aatctcgacc tccacgtcga gggctttgcc gtgcatcagt
     1681 gacgccttcc cataggcggc ggtgcgcatc cttgctcgtg aaggaagtcc ccggtccgtc
     1741 tgtcgttcag gcgggccgtt ttgccacctc ccggaaggtg tcttccaggc ggttgagcat
     1801 ctcctgcagc aggtccatcg aaatagccag agcaggctcg atgcgaatga cctgagcctt
     1861 cgagtacgtg cccgctacca gcactccacg cttgaacagt ccggacgcta cctgccaccc
     1921 gatctcctgg gccggaaact ccatcccgat cagaaggccc tttccatggg cctccttcag
     1981 gacctgggga tacttctgct ggagacagcc gagctcccgc aacagaaatt cgcctttggc
     2041 ggcggcctgg cccggaaggt cctcctccag cgtgacctga atggccgcga gccccgctgc
     2101 acacgccagc gggttacccc caaacgtggt ggagtggatg atcgggttgg ggatcatgac
     2161 ctcccagatc ttcgcggtgg agatgaacgc cgacaggggc atcacgcctc caccgatcga
     2221 ctttcccatg cacatgatgt ccggggccac atcccagtgg tccacccccc acatcttccc
     2281 ggttcggccc atcccggtct ggatctcgtc cacgatgagc agggccccgt accgggtgca
     2341 gagctcccgt gcccggggga agtagtcgtc aggcggaacg actcctcctg cctcgccctg
     2401 aatcggctcc agcaccaccc cggcgatgcg gactcctacg gcgtcgcacc gctggaactc
     2461 gtactccagg gcgtccgcat cgccgtaagg gacgaatcgg acatcctgga gcccgaactg
     2521 aaacggctcg cggaacgacg ccttgcccat gagtgacagc gagcccatcg atttgccgtg
     2581 gaatccaccc agcgccgaga tgaaggtgtt gcgcttggtg tagaggcggg tcagcttgat
     2641 ggccccctcg atggcatcgg tcccgttatt gatgaagaag gagttctgca actcgcctgg
     2701 ggtcacctcc gcaagcaccc gggccagcgc cgcacgccag ggctcgagca gctcctgact
     2761 attgagcgcc atgcgttgga gctggttggt gacggccttc accaccttgg ggtggttgac
     2821 ccccgcgctg aagatgccat agccgcccag gcagtcgata tattcccggc cgagcaggtc
     2881 gtgcagcgtt gagccctcgc cggaccactc cagggcagca aactgtcccg cttccgtgac
     2941 cgacttgcgg taggtaacga acccgcggtt gtagtacttc tcgtagctgt ccaccgtttc
     3001 cgcgatgaac gcccgcttct cctccgtcgt catctcctgt ccggcgatga gatcgagata
     3061 ccgtcgggtg tggcgcacga cctggtcatt cggtaaccgc aattaatcgg cgctccttct
     3121 tagagaggac ggagaaggct ccgtcaagca gacttgatct ccgtccagat ctggtcccac
     3181 gttgccgtgt ccttgccgag gtccacctgg tactccagac gcttgagctc gctctcggtg
     3241 gggtagggta ctggattctt catgactttc gccgccgcgg cattgggagt tccgtagccg
     3301 gtggcttcgg acaacgcggc tccgacttca ggccgcagga tgtagttcat ccactcgtgg
     3361 gcggcccgct tgttcggcgc acttttcggg acgcacatcg agtcgcccca gatggtgcag
     3421 ccttccttgg gaatcacata tgccagattc ggctgctcgg cccgggcctg ggcggtgtcg
     3481 ccgttccaga gctgggagat ccacacgtcg cccgagatga gctgggcctt gaccggcgcc
     3541 gagatgtagg ccttcaactg cttcttggcg gcgatcgcat cggccttggc ctgggagagc
     3601 tccgccggat tggtcgagtt gagcgagtgc ccgcgatagc gaagcatagc cccgatgacc
     3661 tcgcggccgt cgtccatcat ggtcatcttc ttcccgaact gcttgtcgtg gaacaccgcc
     3721 cagctgtcca ctgggggctt caccttgtcg ttgcggtacg cgatgccggt cgtcccccac
     3781 tgccacggga ctgtatgctt gttccccggg tcggtcggca ggttccgaaa gatgggcgag
     3841 atgttgttga agttggtcag gtacttcttg ttgatgggcg tgatcatgtc cgtggcaacc
     3901 atgaccggga tgatataccc gctgggcacg acgatgtcgt acccggtggc gccggcctgg
     3961 agcttggcga ccatctcctc gttgctctcg taggtgtcgt aggtcacctt gaccccgaac
     4021 tccttctcga agttcggcac ggtgtcatcg gcgatgtagt cggaccagtt gtagatatga
     4081 agctccttct cgatgggccc gaggtccgcc acagcgcccg cgccggcact gtccggtgcg
     4141 ccggccgcgc tcttgtcctt ccgttggcag gcctgcagca acgcgcccac ggagcttagg
     4201 ctcaggccga ggcccagggc tcgaaccacg aactcccgcc gcggaatccc gccgcgctcc
     4261 aactgcgcca ccagccgtcc gacttcttta cgcttgctca cgagattcac ctacgtcatg
     4321 atggtcatgc cgaggcgctt ctcgacgttc gcctagccga ggcggtcgcg cactcggtaa
     4381 taccccccga ccagcggcag gaaccaaggt actccgttgt aaaacgggat ggcgcgaaag
     4441 cgtgacgtgc ccagatcggg tatctcacct acccccgcaa gcagctcccc catccgaccg
     4501 ccgagatagg tggccagcgc cacgccgtgg ccgcaatatc ccatcgagta gtggacacca
     4561 tcgagccgtc cagcatgggg caggtggtcg accggacagg ccacctttcc cgaccaggca
     4621 tactcgattg tcgcccccgc cagctcgggg aagacttccc ccatgccggc agccagaata
     4681 gcggcgctgc ggcgggtgcc tgtgggagta aaggacgcac gcccaccaaa gaccatacgg
     4741 cgatccggtg aaagccggaa gtagtaaagc agatgcttgg tgtcgctgaa cacccggttg
     4801 tgcggtatca ggcgtcgggc ctgctcctca tccagaggca ccgtggcgat ctggtagctg
     4861 ccgatcggga tgacccgtct ccgtaaggat gccaatgccc gcggcgtgta gccgttggtt
     4921 gcggcgagga tttcccgggc cttcacggtt cctttcgtgg tggttaattc gaacgcccca
     4981 cgaatccggc ggattcgtct caccgcagcg cctt
//
LOCUS       DASYRV010000566         4101 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_766029, whole genome shotgun sequence.
ACCESSION   DASYRV010000566 DASYRV010000000
VERSION     DASYRV010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4101
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_766029"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>4101)
                     /gene="rpoC"
                     /locus_tag="VGQ24_14980"
     CDS             complement(<1..>4101)
                     /gene="rpoC"
                     /locus_tag="VGQ24_14980"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR02386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEV8456201.1"
                     /translation="ERIFGPVKDWECHCGKYKRIRYRGVICDRCGVEVTLSKVRRERM
                     GHIELSVPVAHIWFFKTLPSPMGNLLNVTLRELERVIYYSSYIVIDTGKQDVEPQQLL
                     DEEEYLTLRQKAREEGDTGFRADIGAPAVRALLERVDVKKLADELRSSVVTETSQHRK
                     KQMLKRLKIVDAFLYSGEAQDMGNQPSWMIMDVVPVLPPDLRPLVPLDGGRFATSDLN
                     DLYRRVINRNNRLQKLIQHRAPEVILRNEKRMLQEAVDALFDNGRRSKAIRGRGKRPL
                     KSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELRLHQCGLPKAMAVELFKPFII
                     HKLVENGIAETVKRAKKIVEREGPEVYEILEEIIQDHPVLLNRAPTLHRLGIQAFEPK
                     LVEGQAIRIHPLVCAAFNADFDGDQMAVHVPLSFEAQLEARLLMVSSNNILKPSDGRP
                     VAEPSQDMVLGSYWLTKLPRGLEESLRVGAGKLEETRARLWKSARFYGSIAELEMGLL
                     GGKTSYHTAIHFWYIPPSEALDREPRWVRTTVGRVLFNNILPRRLVAELGFRDDLMKK
                     KNLSELVLQSYRRAGLKETVEFLDRLKRFGFDFATMGGISIGVEDLEIPIEKAQLLEE
                     AQKRVERFQRAYNTGQITFGERYNKVIDAWTHANNDVAEAMVNSMRTSRGGFNPVFMM
                     FDSGSRGSRDQIRQLAGMRGLMAKPQKKLTGGIGEIIESPIKSNFREGLSVLEYFIST
                     HGARKGLADTALKTADAGYLTRRLVDVAQDVTITEEDCGTILGLDTAALKEGEDVIET
                     LKERILGNVAGEDVFDPHELDEHGDPKLLVQAGQLIDEETSDAIEDAGIEKVKIRSVL
                     TCEAKRGICRMCYGRNLATMDMVDMGEAVGILAAQSIGEPGTQLTLRTFHIGGTASRI
                     AEEAERRARSDGVVKYTKGLEYSDLAVEYEDGTKGSIRVVLTREDESASEEAKEGLLL
                     VDPKDPSHVLSRYPVPEGAILHVREGDPVSKGDSEKRATILYTWDPYNDPSIIKSDGE
                     LRWKDLVKDVTLREELDEGTGLRSLVVTADPDRELHPSVLVYLPNRKDPQEYSLAEGS
                     RIIFGSPTDMVSRAVDLADESNPWSSKYHVDERPVSEAWPSKSKKESRDKTVYLSPPV
                     KVTKGITVTKIPRQVYKTRDITGGLPRVQELFEARRPKDPATMSEIDGVVKFGEIKRG
                     KREIFVYPMTKEGAIVEGEAAQTYEVPAGKHLRVHEGDRVRAGDRLTEGPVNPHEILL
                     IKGPRAVQEYLLNEVQEVYRLQGVRIADKHIGVIVRQMLQKVRVTDPGDTSFLEAEAV
                     DKLSFREENERILKRKSKPATAEPLLLGVTKASLTTQSFISAASFQ"
BASE COUNT          628 a         1368 c         1293 g          812 t
ORIGIN      
        1 tcctggaagg aggccgccga gatgaagctc tgggtggtca ggctcgcctt ggtcacgccc
       61 agcagcagcg gctcggcggt ggcgggcttg ctctttcgct tgaggatccg ctcgttctct
      121 tcccggaagc tcagcttgtc cacggcctcg gcctcgagga agctggtgtc gcccgggtcg
      181 gtgacgcgca ctttctgcag catctgacgc acgatcaccc cgatgtgctt gtcggcgatc
      241 cttaccccct gaagccgata gacttcctgc acctcattga gcaggtactc ctgcaccgcg
      301 cggggtccct tgatcaagag gatctcatgc gggttcacgg ggccctcggt cagccggtct
      361 cctgcgcgga cccggtctcc ctcgtggacg cgcaggtgct tgccggccgg aacctcgtag
      421 gtctgggcgg cttccccctc gacgatggcg ccttctttgg tcatcggata gacgaagatc
      481 tcgcgcttgc cgcgcttgat ctcgccgaac ttcaccacgc cgtcgatctc cgacatcgtg
      541 gcgggatcct tcgggcgccg agcttcgaag agctcttgca cgcggggcag accgccagtg
      601 atatcccgcg tcttgtatac ctggcgcggg atcttggtga ccgtgatacc cttggtcact
      661 ttaaccggcg gcgagaggta caccgtcttg tcgcggcttt ccttcttcga cttcgacggc
      721 caagcctcgc tgaccggacg ctcgtccacg tggtacttgg acgaccaggg gttggactcg
      781 tcggccagat ccacggcccg gcttaccatg tcggtgggcg acccgaagat gatccgggaa
      841 ccttccgcca ggctgtattc ctgtgggtcc ttccggttgg ggagatagac cagcaccgag
      901 gggtgcagct cccgatccgg gtcggcggtg acgacgagtg aacgcaggcc ggtgccttcg
      961 tccagctcct cccgcagagt gacgtccttc acgaggtcct tccagcgcag ctcgccgtcg
     1021 gacttgataa tgctgggatc gttatagggg tcccaggtgt agaggatcgt ggcccgcttc
     1081 tccgagtcgc ccttggacac cgggtcgccc tcccggacgt gcaggatggc gccctcgggg
     1141 accggatagc ggctcagtac gtgggaagga tccttcggat ccaccagcag gaggccttcc
     1201 ttcgcctctt cgctggcgga ctcgtcctcg cgagtcagca ccacccggat gctgcccttg
     1261 gtaccgtcct cgtattccac ggcgaggtcg gagtactcca ggcccttggt atacttgacc
     1321 accccgtcgg agcgggcgcg ccgttccgcc tcttccgcga tacgggaggc ggtgccgccg
     1381 atgtggaagg tccgcagcgt gagctgcgtt cccggctcgc cgatcgactg cgcggccagg
     1441 atccccaccg cctcgcccat atccaccata tccatggtgg cgaggttccg cccgtagcac
     1501 atccggcaga tgccgcgctt ggcctcacag gtgagcaccg agcggatctt caccttctcg
     1561 atgccggcat cctcgatggc atccgaggtc tcctcatcga tgagctggcc ggcctgcacc
     1621 agcagcttgg gatcgccgtg ctcgtcgagc tcgtgagggt cgaagacgtc ctcgcccgcc
     1681 acgttgccca ggatgcgctc cttgagcgtt tcgatcacgt cctcgccttc cttcagggcg
     1741 gccgtgtcga gccccaggat ggtgccgcag tcttcttcgg tgatcgtcac gtcctgtgcg
     1801 acgtccacca gccgccgggt caggtacccc gcgtcggcgg tcttgagtgc ggtatcggcg
     1861 agccccttcc gggccccgtg ggtcgagatg aaatactcga gcaccgaaag gccttcccgg
     1921 aaattcgatt tgatcgggct ctcgatgatc tcgccgatgc cgccggtgag cttcttctgc
     1981 ggcttcgcca tgaggccgcg catacccgca agctgacgga tctgatcccg gctgccgcgc
     2041 gagcccgagt cgaacatcat gaacaccggg ttgaaaccgc cgcggctggt gcgcatggaa
     2101 ttcaccatcg cctcggccac gtcgttgttc gcgtgggtcc aggcgtcgat caccttgttg
     2161 tagcgctccc cgaaggtgat ctggccggta ttgtaggctc gctggaaccg ctcgacccgc
     2221 ttctgagcct cttccagcag ctgcgccttc tcgatcggga tttccaggtc ctcgacgccg
     2281 atcgagatac cgcccatcgt cgcgaaatcg aacccgaacc gcttgagccg gtccaggaat
     2341 tcgacggtct ccttgagccc ggcgcggcgg tagctctgca gcaccagctc cgagaggttc
     2401 ttcttcttca tgagatcgtc gcggaagccg agctcggcca ccagccgccg cggcaggatg
     2461 ttgttgaaga gcacgcggcc caccgtggtc cgcacccagc gcggctcgcg gtccagtgct
     2521 tccgacggcg ggatgtacca gaagtggatc gccgtgtgat aagacgtctt cccgccgagc
     2581 agccccatct cgagctcggc gatgctgccg tagaagcggg cgctcttcca gagccgcgcg
     2641 cgggtttcct cgagcttgcc ggccccgacg cgcagcgact cttccaggcc gcgcggcagc
     2701 ttggtgagcc agtaggagcc gagcaccatg tcctgcgacg gttccgccac cggccgcccg
     2761 tcggacggct tgaggatgtt gttggaggag accatcagca gccgcgcttc gagctgcgcc
     2821 tcgaaggaca ggggcacgtg cacggccatc tggtcgccat cgaagtccgc attgaacgcg
     2881 gcgcagacca gcgggtggat ccggatggcc tggccctcca cgagcttggg ctcgaacgcc
     2941 tggatcccga gtcggtgcag cgtcggggcc cggttgagca gcacggggtg atcctggatg
     3001 atttcttcca ggatctcata gacctccggc ccttcgcgct ccacgatctt cttggcgcgc
     3061 ttcacggtct ccgcgatgcc gttctccacc agcttgtgga tgatgaacgg cttgaagagc
     3121 tccaccgcca tggccttggg caagccgcac tggtgcagcc ggagctccgg ccccaccact
     3181 atgaccgagc ggcccgagta atccacccgc ttgccgagca ggttctgccg gaagcggccc
     3241 tgcttgcctt tgagcatatc gctcagggac ttgagcggac gcttgccccg gccgcgaatc
     3301 gccttggagc gacggccgtt gtcgaagagc gcgtccaccg cctcctgcag catacgcttt
     3361 tcgttgcgga ggatgacctc cggcgcgcgg tgctgaatga gcttctggag ccggttgttc
     3421 cggttgatca cccggcggta gaggtcgttg agatcgctgg tagcgaaacg tcccccgtcg
     3481 agcggaacca ggggtcggag atcgggcggc agcaccggca ccacgtccat gatcatccag
     3541 gacggctgat tccccatgtc ctgggcttcg cccgaataga ggaacgcatc cacgatcttg
     3601 agccgcttga gcatctgctt cttgcggtgc tggctggttt ccgttaccac ggaggagcgc
     3661 agctcgtcgg cgagcttctt cacgtcgacc cgctcgagca gggcccgcac ggccggtgcg
     3721 ccgatatcgg cccggaagcc agtatcgccc tcttcgcgtg ccttctggcg gagggtgagg
     3781 tattcctcct cgtcgagcag ctgctgcggc tccacgtcct gcttgccggt atcgatgacg
     3841 atgtagctcg agtagtagat gacccgctcg agctcccgca gcgtcacgtt gagcagattg
     3901 cccatcgggc tcggcagcgt cttgaagaac cagatgtggg ccactggcac gctgagctcg
     3961 atatggccca tacgctcgcg gcgcaccttc gagagggtga cctcgacgcc gcagcggtcg
     4021 cagatcacgc cgcgatagcg gatccgcttg tacttgccgc agtgacactc ccagtccttg
     4081 accggaccga agatccgctc g
//
LOCUS       DASYRV010000567         7598 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2642222, whole genome shotgun sequence.
ACCESSION   DASYRV010000567 DASYRV010000000
VERSION     DASYRV010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7598
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2642222"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1666
                     /locus_tag="VGQ24_14985"
     CDS             <1..1666
                     /locus_tag="VGQ24_14985"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEV8456202.1"
                     /translation="AFSLMEQSMTEFPPGGTRRILVQPAELVAPSECAPEISTTGSNG
                     HRDTSEARKLGTLLDVSQALAGHLNLQAGLSGLLVILGRRCGAVRGAVALLDERTGDL
                     QVRAGLGLTRDGQSTRYHLGEGITGEVAASGESRVVPEISQDTRFLHRATSRRERRGG
                     EFSFVCVPILLHRRPVGTLSIEVPHRPERDFERLLKFLRVVASMISQAVRIHRLLETE
                     RQRLVSENAQLRQELLQRYDFSDMVGASGPMRQLYEEMARVAGTNTTVLIRGESGTGK
                     ELIAQAIHYHSPRAKKPLIKVNCAALPETLVESELFGHEKGAFTGAQARKKGRFELAH
                     GGTIFLDEIGELSPAIQVKLLRVLQEREFERLGGTEPVRTDVRVIAATNRDLEKALAN
                     GGFREDLYYRLNVFPIFIPPLRERKSDVLPLADHFAEKYAREHGKSIKRISTSAIDML
                     ASYHWPGNVRELENTIERAVLMADGEVIHGHHLPPTLQTAEATGTLVSTSLGGAVEAF
                     ERGLIEDALKTTGGNRAKAARLLSTTERVISYKARKYGIDPRRLRG"
     gene            complement(1614..1889)
                     /locus_tag="VGQ24_14990"
     CDS             complement(1614..1889)
                     /locus_tag="VGQ24_14990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YgjV family protein"
                     /protein_id="HEV8456203.1"
                     /translation="MPGPALTDGVGWLATAVFVVSYRFRDQRTLRWVQALAAVLWVVY
                     GLARHAMPVVIANLLVAGMAVCSSRPMRPDLSRASDGGQSRTSSPYS"
     gene            complement(1889..2689)
                     /locus_tag="VGQ24_14995"
     CDS             complement(1889..2689)
                     /locus_tag="VGQ24_14995"
                     /inference="COORDINATES: protein motif:HMM:NF024122.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase-like hydrolase"
                     /protein_id="HEV8456204.1"
                     /translation="MRHYLLASDFDQTLSFNDSGILLSEMLGIGGFAEKCAGLSAMHL
                     VQQGAELAYLLLHDPEYRRVRSDDLAEVGRRIRLKQGIGVLSRILDALQGFRFTFCVV
                     SAAPEEVIRSALEGMVPPERIYGTRFRYDPVSGEIHSIIRVPAGYGKVAVLEQIRADL
                     GLGGDRVVYVGDGGSDVHVMLHVNRLDGLTVAVSENKFLTPIARRTILSDDVLSVLVP
                     ILEEIVGLDAPAIRALFGSHGFVLQEWDKARTDSLIIRGTLPPPAAVA"
     gene            complement(2698..3024)
                     /locus_tag="VGQ24_15000"
     CDS             complement(2698..3024)
                     /locus_tag="VGQ24_15000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456205.1"
                     /translation="MQQRAIALVAALILGIAGLAVPPPLHAQAAATAATRAVQLESLS
                     RERARHWAATMPALRCAPAPLTERPTTAAEFARPRVLPLEAAFLDAATVKRTFAARGG
                     RIPRSN"
     gene            complement(3296..3670)
                     /locus_tag="VGQ24_15005"
     CDS             complement(3296..3670)
                     /locus_tag="VGQ24_15005"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8456206.1"
                     /translation="MPTVLLVDDESSMRSALRKLFERAGLSVLEADSGRGALEVIASD
                     PGISAVVSDFLMPEINGLDFYDALVARSPHLRERVIFLTGAARDPRVHHPLEQRGVPL
                     ISKLDDLEIVLDAVKLALLRRR"
     gene            3841..5094
                     /gene="tig"
                     /locus_tag="VGQ24_15010"
     CDS             3841..5094
                     /gene="tig"
                     /locus_tag="VGQ24_15010"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEV8456207.1"
                     /translation="MNQITVEKTAEDSASKSLHVTVPIDRVREAEARALKYYTKRARL
                     PGFRPGKAPDTVVRKRFGDAIRQTVLEEVIRESWETAKTAESLKPITDPAIRNLKFEE
                     GSPIEFELHVEVRPELKLERVGGFRLERRVAPVTDSAVDEQLARIQEQKAAWIPVEGA
                     KPTPGQMVRVEVAPIENGVAGAAQPHDLVLGENQAIPELEERIMTLLPGETAEAEVRF
                     PDDHPDESRRGQTRQVRIALHEVKRQELPPLDDALAREAGDFESLEALRAAIRQDLER
                     EAAREADTEVRRNLIGQLVEANRVEAPHSLVHRLLHGYAEIYKVPEDQLAGFEQQFHG
                     IAQAQVKRDLALEALVEAHELRATESELDERINAMAATRGVPAGQVYASLQKANRLQE
                     LERAITEEKAFDFLLKQSTVEDVRS"
     gene            5097..5729
                     /gene="clpP"
                     /locus_tag="VGQ24_15015"
     CDS             5097..5729
                     /gene="clpP"
                     /locus_tag="VGQ24_15015"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HEV8456208.1"
                     /translation="MATLYPPYIIERSSRGERTYDIFSRLLMDRIVFLGAPINDDVSN
                     IIIAQLLFLEADNPDKDIYLYVNSPGGVVSAGMAIYDTMQHLRAPVNTICMGMAASMG
                     SFLLAAGAKGKRSALPHSRIMIHQPSGGTQGTAADIEIQAREILYLRSKMNSLYALHT
                     GQPIETIERDMDRDRFMSAEEAKAYGIIDSVFTPHKDLVPHKNGKEGKET"
     gene            5792..7039
                     /gene="clpX"
                     /locus_tag="VGQ24_15020"
     CDS             5792..7039
                     /gene="clpX"
                     /locus_tag="VGQ24_15020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018286217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEV8456209.1"
                     /translation="MSNDKHLRCSFCGKSKDSVRKFISGPSVYICNECITLCNEILAE
                     DEEREVADSITQVPTPSEIKDVLDQYVIGQERAKRTLAVAVYNHYKRINASSGREGDV
                     ELDKSNILLLGPTGVGKTLLAQTLARILDVPFTIADATTLTEAGYVGEDVENILVRLL
                     QAGEFNVAECERGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIASVPP
                     QGGRKHPQQEYIQINTKDILFICGGAFDGLEKIIEARTGRQQIGFSSEERKSNPQLTK
                     GNPYAEVEPDDLLRFGLIPELVGRLPVVVSLEALDEDALVRILVEPKNALTKQYKKLF
                     ELEDVGLTFDPESLRAVAQRALKRGTGARGLRAILETMMTDIMFDLPNREDVREIVIT
                     KEAISEGTSPLIVTERARAKREA"
     gene            7135..>7598
                     /gene="yihA"
                     /locus_tag="VGQ24_15025"
     CDS             7135..>7598
                     /gene="yihA"
                     /locus_tag="VGQ24_15025"
                     /inference="COORDINATES: protein motif:HMM:TIGR03598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HEV8456210.1"
                     /translation="MQAGANPLVSQPIEFVGSFPDPGVRVEPILPEIAFIGRSNVGKS
                     SLINTLVGRPGLARVSGSPGKTTLLNFYRLPALYLVDLPGYGFARASKSDRAGYRKLV
                     TGYLRTRETLAGIVWLLDIRHDPSREDLEMQELLVESGRPVLATFTKADKLTR"
BASE COUNT         1456 a         2476 c         2492 g         1174 t
ORIGIN      
        1 ggccttttca ttgatggagc aatccatgac cgagttccca ccgggcggca cccggcgcat
       61 cctggtccag cccgccgagc tggttgcccc ctccgaatgt gccccggaga tatccactac
      121 tggatccaac gggcatcggg acaccagcga ggcccggaag ctcggcaccc tgctggatgt
      181 gagccaggcg ttggccgggc atctcaacct ccaggccggg ctctcggggc tgctggtcat
      241 tctgggacgg cgttgcggcg cggttcgggg cgcggtggcg ctcctcgacg agcgtacggg
      301 cgaccttcag gtccgggcag ggttgggcct cacgcgtgac gggcagtcga cccgctacca
      361 cctcggcgaa gggatcaccg gcgaggtggc cgcatccggc gagtcgagag tggtgcctga
      421 gatcagccag gacacgcgtt tcctccaccg cgccaccagt cgccgggaac ggcgaggtgg
      481 tgagttcagc ttcgtgtgcg tgcccatcct gctccaccgc cggccggtcg gcacgctgtc
      541 gatcgaggtt ccccatcggc cggagcgaga tttcgaacgg ctgctgaaat tcctccgggt
      601 cgtagcctcg atgatctcgc aggcggtgcg catccaccgg cttctggaaa cggagcgcca
      661 gaggctggtc tccgaaaacg cccagctccg ccaggagctg ctgcaacgct atgacttctc
      721 cgacatggtg ggtgcgagcg gaccgatgcg gcagctgtat gaagagatgg cgcgggtggc
      781 ggggaccaac acgaccgtgc ttatccgggg tgagtcgggc accggcaagg agctgatcgc
      841 gcaagcgatc cactaccact cgccccgggc caagaagccg ttgatcaagg tgaactgcgc
      901 cgcgttgccc gagaccctgg tcgaatcgga gctcttcggc catgagaagg gggccttcac
      961 cggcgcgcag gccaggaaga aaggtcgctt cgagctggcg catggcggaa cgattttcct
     1021 cgacgagatc ggcgagctga gtcccgccat ccaggtgaag ctgctccggg tactgcaaga
     1081 gcgtgagttc gagcggctag gcggaaccga gccggtccgc accgatgtgc gcgtcatcgc
     1141 ggccaccaac cgggacctgg agaaggccct ggcgaacggc ggcttcaggg aggacctgta
     1201 ttaccggctc aatgtctttc ccatcttcat tcctcccctc agggagcgga aatccgatgt
     1261 attgccgctc gccgaccact tcgccgagaa gtacgcccgg gagcatggga aaagcatcaa
     1321 gcgcatctcg acatcagcca tcgacatgct ggcgagctat cactggccgg gcaacgtgcg
     1381 tgagctggag aacacgatcg agcgcgcggt gctcatggcc gatggggagg tgattcatgg
     1441 ccatcatctg ccccccacgc tgcagacagc cgaggcgacg ggaacactcg tgagcacgtc
     1501 cctgggcggc gcggtcgagg ccttcgagcg cggcctcatc gaggacgcat tgaagaccac
     1561 cggcgggaac cgggcgaagg cggcccgctt gctgagcacg accgagcggg tgatcagcta
     1621 taaggcgagg aagtacggga ttgacccccg tcgcttgcgc ggctgaggtc gggcctcatc
     1681 gggcgggagg aacagacggc catgccggcc actaggaggt tggcaatgac caccggcatg
     1741 gcgtgccggg ccagcccata caccacccac agcacggcgg cgagcgcctg gacccaccgc
     1801 agtgtccgct gatctctgaa gcggtacgac acaacgaaca cggccgtggc cagccatccc
     1861 accccgtcgg tcagggctgg ccccggcatc aggcgaccgc ggcgggcggc ggcagggttc
     1921 cccgaatgat gagcgaatcg gtcctggcct tgtcccattc ctggagcacg aagccgtgag
     1981 aaccgaacag cgctcgaatc gctggcgcat ccaggcccac gatctcctcg aggatgggca
     2041 ccagcacgct cagcacgtca tcgctgagga tggttcgtcg ggcaatcggg gtcaggaact
     2101 tgttctccga caccgccacg gtcaggccgt ccaggcggtt gacgtgcagc atgacatgca
     2161 cgtccgagcc gccgtcgccg acgtacacca cccggtcgcc gccgagcccc agatcggcgc
     2221 ggatctgttc cagcacagcg actttgccat atcccgccgg aactcgaatg atcgagtgga
     2281 tctcccctga gacgggatcg taccgaaacc gggtcccata gatgcgctcg ggcggcacca
     2341 tgccttccag cgccgatcgg atcacctcct ccggggccgc ggagaccacg cagaaggtaa
     2401 agcgaaaccc ctggagggca tcgagtatgc gggacagcac tccgatgccc tgcttgaggc
     2461 ggatgcgccg ccctacctcc gcaagatcat ccgatctgac tcgccggtac tccggatcgt
     2521 ggagcagcag atacgcgagc tccgcgccct gctgcaccag gtgcatggcc gacaacccgg
     2581 cacacttctc ggcaaagccg ccgattccga gcatctcgct cagcagaatt cccgaatcgt
     2641 tgaagctcag cgtttgatcg aaatcgctgg ccagcaggta atggcgcacg gactcactca
     2701 gttggatcga gggatacggc cgccccgcgc ggcgaacgtc cgcttgacgg tcgcggcatc
     2761 gaggaacgcc gcctcgagcg gcagcacccg cggccgggcg aactccgccg ctgtcgtggg
     2821 acgctcggtc agcggtgccg gagcgcaccg gagtgccggc atcgtcgccg cccaatgccg
     2881 ggcgcgttcc cgggagaggg actcgagttg caccgcgcgg gtcgcggccg tggccgccgc
     2941 ttgtgcgtgc aacggaggcg ggacggccag tcctgcaatg ccgagaatca gtgctgcaac
     3001 cagggcaatg gcgcgctgct gcatgctgaa ggactcctga ctcgaatgaa acctcgctgc
     3061 cgtcaccacc ggacggcgtg aactgtgcgc gcccaattgc gcggtgcgac caaggtcagg
     3121 tcacagttcc gaaacagcgc agtcctgacc gctgcgcagg tatgcaaggc aacgagtatg
     3181 ccaggcgtgc accacggctg aatccccgga agaggggggt tcgcctggcg cgccgtcgtc
     3241 ctcgcctaca tgaatgtggg aatgagagga gggccctaca aaatcgtcgg aaccgctagc
     3301 ggcgtcgcag cagtgccagc tttacggcat cgagcacgat ctcaagatcg tccagcttgc
     3361 tgatgagcgg cacgccgcgc tgctccagag ggtggtgcac cctcggatcg cgggcagctc
     3421 cggtcaggaa gatgacccgc tcccggagat ggggcgaccg ggccaccaac gcatcgtaga
     3481 aatcgagtcc gttgatctcg ggcatcagga aatcgctcac caccgcggaa atgcccggat
     3541 cggacgcgat cacctccagg gcgccgcgcc cggaatccgc ctccaatacg ctgaggccgg
     3601 cacgctcgaa gagcttccgc agggcgctcc tcatggagct ctcatcgtct accagcagga
     3661 ctgtgggcat gccttgcctg aaagggtagt gctgctcggg cgggatcggt gggtgcagcg
     3721 aagccgagcg ccgaatcttg gcggaggccg gccggttgtg caacggcgag cgggtgcaac
     3781 gtttggcgct gcgggcccaa attgaccctg gggacggcga cagggtagat tccctccacg
     3841 atgaaccaga tcacggtcga gaaaaccgcc gaagactccg cctccaagtc gctccacgtt
     3901 accgtgccga tagaccgcgt gcgcgaggcg gaggcccggg cgctgaagta ctacaccaaa
     3961 cgcgcccggc tccccggctt ccgacccggc aaggcgccgg acaccgtagt gcggaagcgc
     4021 ttcggcgacg ccatccggca gacggtgctg gaggaggtca tccgggagag ctgggaaacc
     4081 gccaagaccg ccgagtcgct caagccgatt accgatcccg ccattcggaa cctgaagttc
     4141 gaggaaggca gccccattga gttcgagttg cacgtcgagg tgcgccccga gctgaagctc
     4201 gagcgggtag gagggttccg gctcgagcgg agggtggccc ccgtgaccga cagcgcggtc
     4261 gatgaacagc tcgccaggat tcaggagcag aaggccgcct ggattccggt cgaaggcgcc
     4321 aagccgacgc caggacaaat ggttcgggtc gaagtggcgc cgatcgagaa tggcgtcgcc
     4381 ggcgcggcgc agccgcatga tctggtgctg ggagagaacc aggcgatccc cgagttggag
     4441 gagcggatca tgactctact cccgggcgag actgccgagg ccgaggttcg attcccggat
     4501 gaccaccccg acgagtcgcg ccggggccag acccgccagg tgcgcatcgc cctccacgag
     4561 gtcaagcggc aggagcttcc gccactggac gatgctctgg cccgtgaggc cggggacttc
     4621 gagagcctcg aggcgctccg ggctgccatc cggcaagacc tcgagcgtga ggcggctcga
     4681 gaagcggata ccgaagtccg ccggaacctg atcggccagc tggtcgaagc gaaccgggtc
     4741 gaagcccccc actcgctggt tcaccggctg ctgcacggct atgccgagat ctataaggtg
     4801 ccggaggacc agctcgccgg cttcgagcag cagttccacg gcatcgcgca ggcccaggtg
     4861 aagcgcgacc tggcgctgga ggcgctggtc gaggcgcatg agcttcgcgc caccgagtct
     4921 gagctggacg agcggatcaa cgccatggcc gccacgcggg gggtgcccgc aggccaggtc
     4981 tacgcttcgc tgcagaaggc caaccgcctc caggagctgg agcgcgccat cacggaggag
     5041 aaggcattcg acttcctcct caagcaatcc accgttgaag acgtcaggtc ctgatcatgg
     5101 ccaccttgta tccgccctac atcatcgagc gttccagccg cggcgagcgc acctacgaca
     5161 tcttctcccg gctgctgatg gaccgcatcg tgttcctcgg cgcgccgatc aacgacgatg
     5221 tctccaacat catcatcgcg cagctgctct tcctcgaagc cgacaatccc gacaaggaca
     5281 tctacctcta cgtcaactcg cccggggggg tggtatcggc cgggatggcc atctacgata
     5341 ccatgcagca cctgcgggcg ccggtgaata cgatctgcat gggtatggcc gcttccatgg
     5401 gctcgttcct gctggcggcc ggggccaagg ggaagcgcag cgcgctgccc cattcccgga
     5461 tcatgatcca ccagccctcc gggggaaccc agggcaccgc ggccgacatc gagatccagg
     5521 cgcgggagat cctctatctc cggtccaaga tgaactcgct gtatgcgctc cacaccggcc
     5581 aaccgatcga gaccatcgag cgggacatgg accgggatcg cttcatgagc gcggaagagg
     5641 ccaaggcgta cggcatcatc gacagcgtgt ttacgccgca caaggacttg gtaccacaca
     5701 aaaacggtaa ggaaggcaag gagacttgac gctcaggggg gccgggggca ctttacccgg
     5761 cacccatcca cctccatcac gacgcggctc catgtccaac gacaagcacc tccgctgctc
     5821 cttttgcgga aaatcgaagg attccgtccg gaagttcatc tccggcccct cggtctacat
     5881 ctgcaatgag tgcatcacac tctgcaatga gatcctggcg gaggacgagg agcgcgaggt
     5941 tgcggacagc ataacccagg ttcctacgcc gtccgagatc aaggacgtgc tggaccagta
     6001 tgtgatcggg caggagcggg ccaagcggac actcgccgtc gccgtctaca atcactacaa
     6061 gcgtatcaac gcctccagcg gccgcgaggg cgatgtcgag ctggataagt ccaacatcct
     6121 gctgctcggc cccaccggag tcggcaagac gctgctggca cagacccttg cccgcattct
     6181 cgatgtcccc tttaccatcg cagacgccac cacgctcacc gaggccggat acgtcggcga
     6241 ggacgtggag aacatcctgg tccggctgct tcaggccggc gagttcaacg tggccgaatg
     6301 cgagcggggt atcgtctaca tcgatgagat cgacaagatc gcccggaaat cggagaaccc
     6361 cagcatcacc cgcgacgtgt cgggcgaagg ggtgcagcag gcactgctca agattctcga
     6421 gggcaccatc gcctcggtcc ccccacaggg cggacgcaag cacccgcagc aggaatacat
     6481 ccagatcaac accaaggaca tcctcttcat ttgcggcggc gccttcgacg ggctggagaa
     6541 gatcatcgag gcccgcaccg ggcggcagca gatcggattc agcagcgagg agcggaagtc
     6601 gaatccccag ctgaccaagg ggaaccccta cgccgaggtc gagccggatg acctgctccg
     6661 cttcggtctg atccccgagc tggtcggccg gttgcctgtc gtggtctcgc tcgaggcgct
     6721 ggatgaggac gcgctggtcc ggatcctggt cgagcccaag aacgccctca ccaagcagta
     6781 caagaagctg ttcgagctgg aggacgtcgg cctcaccttc gatcccgagt cgctccgggc
     6841 cgtggcgcag cgggcgctta agcgcggcac gggcgcccgc ggcctgcgcg ccatcctcga
     6901 gaccatgatg accgacatca tgttcgacct gcccaaccgc gaagacgtgc gcgagatcgt
     6961 gatcaccaag gaggcgatca gcgaaggcac ctcgcccctc atcgtcaccg agcgtgcccg
     7021 ggccaagcgg gaggcgtgag gacgggcgga cggacgggcg gacggacagg cgcgggggag
     7081 gacgggcgga aaggtagagg cagggatgta ggggcggacc gcggtccgcc cttcgtgcag
     7141 gcgggagcta atcctctcgt ctcccagccc atcgaattcg tcggttcctt tcccgacccc
     7201 ggagtcagag tcgagccaat tctccccgaa attgccttta tcggtcgttc caacgtcggg
     7261 aagtcgagtc tgatcaacac gctggtggga cggccggggc tcgcgcgggt gagcggctcg
     7321 ccaggcaaga ccacgctcct caatttttat cggctgccag cgctgtatct cgtggatctg
     7381 cccggctacg gctttgcccg tgccagcaag agcgaccgcg ccgggtaccg gaagctggtg
     7441 accggatacc tgcgcacccg agagacactg gccggcatcg tgtggcttct cgatattcgc
     7501 cacgatccgt cccgggagga tctcgagatg caggagctgc tggtggaaag cggccggccc
     7561 gtactcgcca cctttaccaa agccgacaag ctcacgcg
//
LOCUS       DASYRV010000568         3488 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2419669, whole genome shotgun sequence.
ACCESSION   DASYRV010000568 DASYRV010000000
VERSION     DASYRV010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3488
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2419669"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..279)
                     /locus_tag="VGQ24_15030"
     CDS             complement(40..279)
                     /locus_tag="VGQ24_15030"
                     /inference="COORDINATES: protein motif:HMM:NF025180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HEV8456211.1"
                     /translation="MPADPSSSTPAALAQLAHADPLRPAEPPHLLAYLATLHDPRRAC
                     GRRHPLVAILAMAAAAVLTGARSMAAIAEWAADAP"
     gene            complement(777..1895)
                     /locus_tag="VGQ24_15035"
     CDS             complement(777..1895)
                     /locus_tag="VGQ24_15035"
                     /inference="COORDINATES: protein motif:HMM:NF024668.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4062 domain-containing protein"
                     /protein_id="HEV8456212.1"
                     /translation="MPKRPWRVFLSHTSELRRLPTGGSFIAAAEEAITHAGHVIADMK
                     YFTASELKPAEVCRKAVTGSDVYVAVVGFKYGSPVRDNSRLSYTELEFETATERGLPR
                     LIFLLADETQGSRELYVDLTYGARQQAFRERLREAGVTTTAVTNPQELRLSLFEALRG
                     LESDSTDRGDRVRDWSFTHTAICRRMAAVLVDVMRLLMVRSSSRSYSANRARYQEFIV
                     IATSHFEDLQSNIAALPALGDPRQYEKSREIELRLLWLLRTFAVPPQPAARVARREVA
                     TTREAAELVLAYFDLYAGARDEFDKVLDYIGSFKQAVDSKRNGPDAFFGLRQSLQTAV
                     LTRYGGPSGILMDVDLELALRYFAIDWWLLRNAGFFLN"
     gene            complement(2176..2622)
                     /locus_tag="VGQ24_15040"
     CDS             complement(2176..2622)
                     /locus_tag="VGQ24_15040"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEV8456213.1"
                     /translation="MCAGTAACATTPPLAARTTAARTVRAALCELEAAGLAIRHTPGD
                     GEALHWSATEPPRDTSLANLKLRGPHDLRHTFSTWLEDAGIPARVIDELMGHAGGRRG
                     GGEHDERGSVIGLRYRWTTPETEARVLTAIEQRLAVSLAVAARISR"
     gene            complement(2692..2940)
                     /locus_tag="VGQ24_15045"
     CDS             complement(2692..2940)
                     /locus_tag="VGQ24_15045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456214.1"
                     /translation="MAAYGSVLRSDGERQSPERLENLKGFRTALHGCATRRADAWFEL
                     VDALLVTERLVSLPHLSLEPVHRRGHGSLYAAVRPSTG"
     gene            complement(3166..>3488)
                     /locus_tag="VGQ24_15050"
     CDS             complement(3166..>3488)
                     /locus_tag="VGQ24_15050"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEV8456215.1"
                     /translation="HPSRQGDPSARELVRLMAEETGPDAFIRQQQAIIGRVDSRPGLG
                     AIDRPTLVLVGDCDQLTPPELSAEIAGGIPGARLVVVAGSGHLTPLDQPEEVTKALVE
                     WLQA"
BASE COUNT          617 a         1154 c         1123 g          594 t
ORIGIN      
        1 gggggcgtca cggcgagcgc cgagcgccgc acgcaccggc tagggagcat cggcggccca
       61 ctcggcgatc gcggccatcg accgggcacc ggtcaagacc gcggcggcgg ccatggccag
      121 gatcgcgacc agggggtggc ggcggccgca ggcccgcctg gggtcgtgga gggtggcgag
      181 gtaggcgagc aggtgcggtg gctcggccgg tcggagcggg tcggcatggg cgagctgggc
      241 cagggcggcg ggggtcgagg atgatgggtc ggcaggcacg ggcttccacc gtggtcatga
      301 ggctgtgaga accgcatgat cccgggcgct cgtgcctgct cacgccatcc cgcagtacct
      361 caccaaccag acacactcac agaacgccgg agccctgggg ctgtaggtgg agcgatctgc
      421 ggatctgact aacgttcggt gaccgttcct gcccgttgtt gtccgtggtt tccccgtcgg
      481 gtgcggaccc agcacggacc gacgagggtt ctgatcccct ctggtcgcgg acgcctctgg
      541 tgcttgtcct cggcgactag ggaccggatc ggccggccgc atacgacaag gccgatccag
      601 acttcagccg tagtcctctt ccgtgtcaga gagccgggag gatggcggca acctgcggag
      661 gatgactgag gctggccagt gagctgagca gatggcgggc cgatgatgag cggtgttgtc
      721 cgctacgatc cggcctcttg tggcccggat atggccccgg tgccatcgct ggaaactcaa
      781 ttcaaaaaga accccgcgtt tctaagcagc caccaatcaa tagcgaagta tcgtagggca
      841 agctcaagat ccacatccat caggatccca gaaggtccgc cgtaccgagt tagaacagcc
      901 gtctgcagag attgtcgaag gccaaagaac gcatcagggc cgttccgttt gctgtcaacc
      961 gcctgcttga agctcccgat atagtcgagt accttgtcga actcatccct tgcacccgca
     1021 tacaggtcga agtaggccag tactagctcc gcggcttcac gagttgtcgc cacctctcgt
     1081 cgcgcaaccc tcgctgcagg ttgcgggggg acggcaaacg ttcgcaagag ccacaaaagg
     1141 cggagttcaa tctcgcgcga cttctcgtac tgacggggat caccaagggc cggcagcgcc
     1201 gcaatattgc tctggaggtc ttcaaagtga ctcgtcgcga tcacgataaa ttcctggtat
     1261 ctagctcggt ttgcggaata cgaccggcta ctcgaccgga ccatcaacaa ccgcataacg
     1321 tccaccaaga ccgcggccat acggcggcag atagccgtat gcgtgaagct ccagtcacgc
     1381 accctatcgc ccctgtcggt ggaatcggac tcaaggccgc gcagcgcctc aaacagtgag
     1441 agacgcaact cctgcggatt ggttacagcc gtcgtcgtca ccccagcctc acgtagccgt
     1501 tctcgaaacg cttgctgtcg cgcgccgtaa gtcaggtcca cgtagagctc tctggacccc
     1561 tgcgtctcat ctgcaaggag aaagatcagt cgcgggagcc ctcgctccgt cgctgtttca
     1621 aactcgagtt ctgtgtagga cagccgcgag ttatcgcgca ccggagagcc atatttgaac
     1681 ccgactactg cgacgtaaac atccgacccc gtcactgcct tccggcaaac ctccgcaggc
     1741 ttcagctcac tcgcggtaaa atacttcata tcggcgatca catgacccgc atgtgtaatc
     1801 gcctcctcgg cggcagctat gaacgagcct ccagtcggga gccggcgaag ctccgaagta
     1861 tggctaagaa ataccctcca tggtcgcttg ggcatcaatg cagcatccat gctgatccgt
     1921 taccccgaag gtcgttggta ctcgccattt catcctctcc cagccgttgc gatcaggcga
     1981 agcataatcc ttcacgccag cccacttggt tgccggctgc gggcggcggc cttgaggatg
     2041 tagacgaagg tcttacgagc aagccaagcc tttcgcgact cctggcgagc ctccggccgc
     2101 ggagcgcgcg atgttcgacg gctcgggatg ctaacggaac tctcgtagcc gttcaggtcg
     2161 gtgatcgtcc cccagctacc ggctgatccg ggcagcaacc gccaacgaca ccgccaaacg
     2221 ctgctcgatc gcagtcagta cgcgcgcttc cgtctccggg gttgtccacc ggtatcgaag
     2281 cccgatcacg ctgccgcgct cgtcgtgctc tcccccaccg cgccggccgc ccgcgtggcc
     2341 catcagctcg tcgatgacgc gagccgggat gccggcgtcc tccagccagg tcgagaaggt
     2401 gtggcgcagg tcgtggggac cgcgcagctt gaggttggcg agggaggtgt cgcgcggcgg
     2461 ctccgtggcc gaccagtgca gtgcctcgcc gtcgccggga gtgtgacgga tcgccagccc
     2521 ggccgcttcc agctcgcaga gcgccgcgcg cacggtgcgg gccgccgtcg tcctcgctgc
     2581 gagtggcggc gtagtcgcac acgcggccgt gccagcgcac atacccgggg ctcatgatcg
     2641 ggccggtggc gaccgtgaac gccgcgatgg cgaactcgac cgggtcggcg atcaccccgt
     2701 cgagggcctc accgcggcat ataggctgcc atgcccgcgg cggtggaccg gctccagcga
     2761 caggtgcggc agcgacacca gccgctcggt caccagcagc gcatcgacca gctcaaacca
     2821 cgcgtctgcc cggcgggtcg cacagccgtg cagcgcggtg cggaagccct tcaggttctc
     2881 cagccgctct ggactctggc gctctccatc cgaccggagc acactcccat acgcggccac
     2941 cacgcacctc cgagcacttg gtcgtactcg gcagcatcgc gcggtggccg ccccacgtcg
     3001 agccacactc cccacgcggt taaaagcgaa gctaagacga cgtttcgctc cctttagcgc
     3061 gttgcagttg aagccgactg tcagtcaatc tgtcctgctt tgtgaggtga gcagtcgcac
     3121 ggcagagcct ggggtcttcg ggccgcggcg agtcggcagg gatggtcagg cttgtagcca
     3181 ctccacgagg gccttggtga cctcctcggg ttggtccaga ggggtcaggt gcccggagcc
     3241 agccaccacg accaggcgcg cccctgggat gcccccggcg atctcggccg acagctcggg
     3301 tggggtcagc tggtcacaat cgccgaccag caccagcgtc gggcggtcga tggcgccgag
     3361 cccgggccgc gagtcgaccc ggccgatgat ggcctgttgc tggcggatga atgcgtcggg
     3421 tccggtctcc tcggccatca gccgcaccag ctccctggcg gacgggtcgc cctggcggga
     3481 agggtgga
//
LOCUS       DASYRV010000569         9530 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3476527, whole genome shotgun sequence.
ACCESSION   DASYRV010000569 DASYRV010000000
VERSION     DASYRV010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9530
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3476527"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(204..842)
                     /locus_tag="VGQ24_15055"
     CDS             complement(204..842)
                     /locus_tag="VGQ24_15055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456216.1"
                     /translation="MSNQDRPLFDSSFGALVLVNARGGAKRPPTALTPGRRRLTGGSS
                     TAMSIRFAPEPEPSGNIVDLGEGQTTGPLPLGFEFEFFGVGYTWFDLSSDGFLTFGTH
                     SFPCCPGSHPRSRFIPLSADLNNFIALGWTDGCRLSRRQVAYEVRGAAQRRRLVLSLS
                     RVPASPEDGLGTLTAQLVLHERTGMIDIYTTRQDLVASRVDREAIRFTTAPW"
     gene            1004..2968
                     /locus_tag="VGQ24_15060"
     CDS             1004..2968
                     /locus_tag="VGQ24_15060"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEV8456217.1"
                     /translation="MILCRTLGPVELSVDGGPAPPELLWRKHLALLVYLARSPRRGRS
                     REHLIGLLWGDRTEAAARHSLSEALRVIRHYAGEGSVEVAVGQVRLGPASVQLDVDRL
                     EELAAAGDWAAAAELVSGEFLEGFALAEASEFEDWLAAEREMWGRRGVEVLVSCAEAH
                     AEVGKVEEACGFADRALGLQPMSEAALRCALRCRSLAGDRSGALALFERFHSRLAAEV
                     GVEPSDETRSLMERVRRERAPPAEALGAHVDGLPVRPPLEGRGPELQRLLEAVAGSAR
                     ARRAVLLVLEGDAGMGKTRLLDELLTRLRLDGTPVAAARAVEADRAEPWSGVLALARG
                     GLLEAPGVGAGPSAALAAFAGLLPEWAERFRGAASLAAPHPLGRALAEALRAAVEDQP
                     VVIAVDDAQWLDQDSALSLGAVLRDLAATPLTVVLAIAPYPPRPELDELRVKIGSELA
                     GQTVRLRVLDRAGLRHLAERMLPGYDPVAIDRVVRRVATDSAGLPLLAVELLRAVALG
                     LDLGTISGAWPEPFRTLDQSLPGHLPDAVVAAIRIGVRRLSPPAQRVLTATAVLGDLV
                     PPALLERALSLEAEDVARALDELEWHRWLVAEPRGYSFVARIVRQVVERDIVTPGQRR
                     RVLEAVGRVSASPGDALHRDAAPSRRRLPR"
     gene            complement(2987..3059)
                     /locus_tag="VGQ24_15065"
     tRNA            complement(2987..3059)
                     /locus_tag="VGQ24_15065"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3024..3026),aa:Lys,seq:ttt)
     gene            complement(3122..3874)
                     /locus_tag="VGQ24_15070"
     CDS             complement(3122..3874)
                     /locus_tag="VGQ24_15070"
                     /inference="COORDINATES: protein motif:HMM:NF025774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MEDS domain-containing protein"
                     /protein_id="HEV8456218.1"
                     /translation="MSDSEDLLDIKHAAGFLGVSQTSLRRWTNSGQLACLRVGGKRER
                     RFRRADLVAFMETQPVADAPSRSPGGRQHTTIAGIPVTFGTHLCALYGNDAGRTKLAV
                     AFLSDGLHSGSVCFLNASAEARGQILGQLERRRGSLQPEVDAGRLVLCRYCDTPREQY
                     DYWETNFLSATNAGATSLRVVGDMTSCLDAGMTLDRLMEYEAGYDRRLAKRFPVVTLC
                     LYDVRRFESLEVVKALEAHTDMFRYPAERLLA"
     gene            4009..4809
                     /locus_tag="VGQ24_15075"
     CDS             4009..4809
                     /locus_tag="VGQ24_15075"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEV8456219.1"
                     /translation="MPNRIKGCNHDARLRVLMLESSPETAALIAGELERTGLPVYWVR
                     VDTEAAFVGSLRSVAPDLILATPSLPGFDAPAALRAVQTLRPTAPLIVVAETLDYQTA
                     VTCLRAGAEDVVLKRHVSRLGPATRRALSIRQPLRRLTRRQLEVLRLVSEGRTTRQIA
                     ERLGVSAKTVETHRGAMTKRLGIREVARQVRYAVRVGLVSAGDPVDGVLHAKADEEDK
                     VTAIPDVMGQVCREKPARSRPRLNPDMREVKPSIRRSLMACQTLPIYA"
     gene            4909..5463
                     /locus_tag="VGQ24_15080"
     CDS             4909..5463
                     /locus_tag="VGQ24_15080"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HEV8456220.1"
                     /translation="MITRAVERTNFRNTIVQVETRAAFVRALEIFEPDVILCNHGVAE
                     LSAAGALRLAQDRVPASPFLLLADTFEQSDCDCLKMGAWDCILRSDLSRLLPAVNLAM
                     EACMPLRRLSLRQREVLQLLAMSCSTREIARRLRLSVKTVETHRAAVMKRLEIHQVAN
                     LVRYSLRVGLIQREQPRDLEHAVA"
     gene            5599..6246
                     /locus_tag="VGQ24_15085"
     CDS             5599..6246
                     /locus_tag="VGQ24_15085"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEV8456221.1"
                     /translation="MFSELFPRLRILLLEDDPRDADLVTHTLERLDPRCSVLRVDSRQ
                     AFASALDTFVPDVILSDHAIADFNALDALRLAQARLPEAPFLLVAGAFEQSTSECLRS
                     GATDFIRKSDLSRLGSAIDTAVKLRESLRRLSKRQRQVLQMLAVGCSTREIARQLRLS
                     VKTVETHRAQVMHRTGIHDLAGLVRYAVRVGIVSDSQGSERESAGDAPHSGHRRS"
     gene            6346..7620
                     /locus_tag="VGQ24_15090"
     CDS             6346..7620
                     /locus_tag="VGQ24_15090"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEV8456222.1"
                     /translation="MPRSFPPHIPPPPALVPIQILLVEDNAADVRLMQERLSETGAVP
                     FSLAIANSRAAALARLGAGGIDVLLLDLGLPDSSGMSTFTSVHAQIPALPIIVLTDVA
                     DQSIALKVMQQGAQDYLVKGQLDGNLIWRTIRYAMERQRGRCELVLSETRVRQLNESL
                     ERRVAERTAELAAANRELETFTYSVSHDLRAPLRQIDGFSRILLEHVEPALDAKSQNY
                     LRRIQEGTRHMGRLVDDLLNLAQLGRQAVHTRATPLDAIVNDALSELRADWGDRTIHW
                     TTGGLPTVECDPGLMKIVFTNLLSNAIKYTRPREVATIEIACTVSNGRRTIFIRDNGV
                     GFNMKHADKLFGVFQRLHRADQFEGSGVGLATVRRIIHKHGGDIWAEAESDQGATFSF
                     TLAQEGDSPADEPAVASGSTRAQPRRGGARSG"
     gene            7645..8796
                     /locus_tag="VGQ24_15095"
     CDS             7645..8796
                     /locus_tag="VGQ24_15095"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEV8456223.1"
                     /translation="MIAASNPDARILIVDDEPRNVRVLKRVLAVAGYRQVLAITDPRD
                     AIARFAEIGPDLLLLDLHMPEIDGVAVMERLRAGMPASEYFPILMLTGDASPQACQRA
                     LAMGASDFVAKPFDMHEVLIRIRNLLETRFLHRQVAEHNLQLERKVRERTAELDTAQL
                     DTVARLALAAEFRDDETGRHTQRVGALAELLARAMGWSDAEAALLGLAAPLHDIGKIG
                     IPDAILRKAVMLTARERKTMEQHTTIGARILSGGRSSFIQLAEKVALSHHERWDGQGY
                     PERRVGPAIPSAARIVAVADFFDATVHDRVYRKAWPMDEVFAAIAAMSGSAFDPAVAE
                     LCSRPEVQESMIVSRRALAPVDISPGSGDVTRPTGYSRNRSERRVRRSV"
     gene            8837..9514
                     /gene="bioD"
                     /locus_tag="VGQ24_15100"
     CDS             8837..9514
                     /gene="bioD"
                     /locus_tag="VGQ24_15100"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: protein motif:HMM:NF024891.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004141 - dethiobiotin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HEV8456224.1"
                     /translation="MRVLITGTGTGVGKTWVACALIRALRDLGKQVIAIKPVETGRSG
                     QPSDWEDGVRLAKATGQQQPAQAIIRLPLPGAPVLGGEGVESAIDFDALLLKIERYID
                     GAEFGLVEGMGGLLTPVTWEWNMTDLARDLGACALVVAEDRLGTINHTLLTLSALELA
                     GIPCAGVVLTTPETTDRSTGVNAAAIARLSGVDRVMAVPRAADPGDAAAPMVQVVGWL
                     GRVAAPA"
BASE COUNT         1611 a         3088 c         3185 g         1646 t
ORIGIN      
        1 ccgcgactac ccccaccaca aatggcgaga gccgcagccg tcgacccgga agagcgtaca
       61 aaacctccat gagaggcact cgtgccctca ctcgattcca acaacgcgtg gcgccgcagc
      121 gaacgccacg acgggagcgt ccatcagccc cacttgcagt atccctcagc cagcgcggct
      181 gtcaagcgtg acgcagggta cgctcaccaa ggagcagtgg tgaagcggat cgcctctcga
      241 tcgaccctgg acgcaaccaa gtcctggcgc gtggtgtaga tatcgatcat cccggtccgc
      301 tcatggagga ccagctgagc agtcaaggtc ccaaggccgt cctcggggga ggctgggacc
      361 cgactaagcg agaggaccag ccggcgccgt tgcgccgctc cgcggacctc gtaggcgacc
      421 tgcctccgac tcagccggca cccatcggtc caccccagcg cgataaagtt gttgagatcg
      481 gcacttagag gaatgaagcg gctcctcgga tgagaaccgg ggcaacaggg gaacgagtgg
      541 gtcccgaacg tcaggaaccc gtccgacgag aggtcgaacc aggtgtaccc cacaccgaag
      601 aactcgaact cgaagccaag cggcagtggt cccgtcgttt ggccttcgcc caggtcgacg
      661 atgttcccgc tcggttctgg ttccggcgca aaccggatag acatggctgt ggagctccca
      721 cccgtgagcc ggcggcggcc tggcgtgaga gccgtgggcg gccgttttgc gccaccgcgg
      781 gcgttgacca ggacgagggc gccgaaggag ctgtcgaaga gcggtcggtc ttggtttgac
      841 atgcagactc ctggctggaa tgtccgagcg tgccacctga cctcgaggtt gcgccagcgc
      901 catcaagccg tcgtcaagcg cgttatccct cattgacaac cgggccccct cacggaacct
      961 tctcacctca ctccccggat cctcgcatgg caggccgctg cacatgattc tctgccgtac
     1021 cctggggcca gtcgaactga gcgtcgacgg ggggcctgcc cctcccgagc tcctctggcg
     1081 gaaacatctc gccctgttgg tctatctcgc tcgctcgccc cgtcgagggc gaagtcggga
     1141 gcacctgatc gggctgctct ggggcgaccg gactgaggcc gcagcccggc actcactgag
     1201 cgaggctctg agggttatcc gccattacgc cggcgagggg tccgtggagg tggcggtcgg
     1261 acaggtccgg ctggggccgg cctcggtgca gttggatgtg gaccggctgg aggagctcgc
     1321 ggcagccggt gactgggcgg ccgcagctga gctggtatcg ggtgagtttc tcgagggttt
     1381 cgcgctggcc gaagcctcag agttcgagga ctggctcgcg gcggagcgtg aaatgtgggg
     1441 ccggcgggga gtggaggtgc tggtgagttg cgccgaagcc cacgcggagg tcggaaaggt
     1501 ggaggaggcc tgcgggtttg cggaccgtgc gcttggcctc caaccgatgt cggaagcggc
     1561 cctgcggtgc gcgctacgtt gccggtccct ggcaggcgac cgatctgggg cgctcgccct
     1621 cttcgagcgc ttccactccc ggctggcggc ggaggtaggg gtcgagccca gtgatgagac
     1681 ccggtcgctg atggagcggg tgcggcgcga gcgcgccccc cctgccgagg ctctgggggc
     1741 gcacgtcgac ggtttgccgg ttcggccccc cttggaggga cgaggaccgg agctccagcg
     1801 actgctcgag gcagtggccg ggtcagcgcg cgcgcggcgt gcggtcttgc tcgtgctcga
     1861 gggggatgcg gggatgggaa agacccggtt gttggacgag ctgctcaccc ggctgcgact
     1921 ggacgggacc ccggtggccg ctgcccgggc agtggaggcc gaccgggcag agccgtggag
     1981 cggcgtgctt gcgctcgcac gcggcggtct gctcgaggct ccaggtgttg gtgcgggacc
     2041 ttcggcagca ctcgccgcct ttgccgggtt gctgcccgaa tgggcggaga gattcagggg
     2101 agcggcgtct ttggcggcgc cccacccatt gggccgggca ctcgcagagg cgcttcgggc
     2161 ggcggtggaa gatcagccgg tcgtgatcgc agtggacgac gcgcagtggc tcgaccagga
     2221 ctcggccctt tcgctcggcg cggtgcttcg cgacctcgca gccacgccgc tgacggtggt
     2281 cctcgcgatc gcgccctacc cgccgagacc cgagctggac gagctccgcg tcaagatcgg
     2341 cagcgagctg gccgggcaga cggtgcggct ccgggtactg gaccgggcgg gactccgcca
     2401 cttggcggag cgaatgctgc cgggttacga ccccgttgct atcgaccgcg tggtgcgccg
     2461 ggttgcgacc gattccgctg gattgccgct ccttgcggtt gagctcctgc gcgcggtcgc
     2521 gctcggcctc gatctgggaa ccatctcggg ggcatggccg gagccgtttc ggacgctcga
     2581 ccagagcctg ccaggccacc tcccggatgc tgtcgtcgct gccatccgca tcggggttcg
     2641 gcggctgagc ccgccggccc aacgcgtgct cacagccacc gcagtcctgg gagacctggt
     2701 acctccggcc ctgctggagc gcgcgctctc cttggaggcc gaggacgtgg cccgggccct
     2761 ggacgagctg gagtggcacc gctggctggt ggcagagccg cggggatact cgttcgtcgc
     2821 ccggatcgtg cgacaggttg tcgagcggga catcgtcacc ccgggacagc ggcggcgggt
     2881 gctggaagca gtgggccggg tgtcggcttc tcccggggat gccttacacc gcgacgctgc
     2941 cccctccaga cgcagactgc cccggtagct gaggtggaac tgaggatgag ggcggtggga
     3001 ctcgaaccca cgacctaggg attaaaagtc ccttgctcta ccagctgagc tacgcccccg
     3061 atgtgcggcc gaaatactga gcctcaaata tcctagacaa ctcatccagc ggcaaccttg
     3121 gttacgccag caggcgctcg gcgggatagc ggaacatgtc cgtgtgcgcc tcgagcgcct
     3181 taaccacctc caggctctcg aaccggcgca cgtcatagag gcataacgtc actactggga
     3241 agcgcttggc aagtctccgg tcatagcccg cctcgtactc catgagcctg tccaacgtca
     3301 tccctgcgtc caggcaggag gtcatatctc cgaccacgcg gagagaggtg gctccggcgt
     3361 ttgtagccga gaggaaattg gtctcccaat agtcgtattg ctcccgcggg gtgtcgcaat
     3421 acctgcagag caccagtctg ccggcgtcga cctcgggctg aagtgagcct ctcctccgct
     3481 cgagctggcc caggatctgg ccacgagctt cggcggacgc attgagaaag cacacactgc
     3541 ccgagtgcag accgtcggac agaaacgcta cggccagttt tgtccttccc gcatcgtttc
     3601 catatagggc gcagagatgg gtcccgaagg tcaccggaat tccggcgatg gtggtgtgct
     3661 gccggccgcc tggagatcgg gaaggggcat cggcgaccgg ctgcgtctcc atgaaggcca
     3721 ccaggtccgc gcgccggaag cggcgctccc gctttccacc cacccgcagg caggcgagct
     3781 gacccgaatt cgtccaccgc cggagcgacg tctggctcac cccgaggaag ccggcagcgt
     3841 gcttgatgtc gagcaggtcc tccgaatcgc tcactaaacc ccccggcccc ctgcgactga
     3901 aggctggcat acggcattct agtcattgct agtctctgtt cccgatttga ccattaacgt
     3961 atagcaaagt atataaaaac tgacccccgc tagaggtgca ttgaaaacat gccgaaccga
     4021 atcaaagggt gcaaccacga tgcccgactc agggtcctca tgctggagag ctctcccgag
     4081 accgcagcgt tgatcgccgg cgagctggag cgcaccggcc tgccagtata ctgggtccgg
     4141 gtcgacaccg aagcggcctt cgtcggatcg ctccggagcg tcgcccccga cctgattctc
     4201 gcgactccaa gcctgccggg attcgatgcg ccggcagcct tgcgggccgt gcagacgtta
     4261 cgtcccacgg cgccgctgat cgtggtggcg gaaacgctcg actatcagac ggctgtcact
     4321 tgtctccgcg ccggcgccga ggatgtggtg ttgaagcgcc acgtgagccg cctcgggccg
     4381 gccaccaggc gggccctttc catacggcaa ccgctcaggc ggctgactcg gcgccagctg
     4441 gaggtgttgc ggctggtgag tgaggggcgg accacccggc agatcgcgga gcggctcggc
     4501 gtgagcgcga agaccgttga gacccatcga ggcgcaatga cgaaacggct ggggattcgg
     4561 gaggtcgccc gtcaggtgcg atacgccgtg cgggtgggac tggtgtccgc gggcgatccg
     4621 gtggacggtg tgctccacgc gaaagccgac gaagaggata aggtgacggc gatccccgat
     4681 gtcatggggc aggtgtgcag ggagaagccg gccaggtcgc ggcctaggct caatcctgac
     4741 atgagagagg tgaaaccgtc tatcaggcgt tccctgatgg cctgtcaaac gctgcccatc
     4801 tatgcttaat attgacgggt cccccgcccg tcatgtgggt ccatgccaac atcaccgccg
     4861 ctcggccttc gagtcctgct gcttacagct gatgcacgtg atgcggactt gatcacgcgc
     4921 gctgtcgagc gcaccaattt ccgcaacacg atagtccaag tcgagaccag agcggcattc
     4981 gtgcgcgcgc tggagatatt cgagcccgac gtgatcctct gcaatcatgg ggtggccgag
     5041 ctgagtgccg ccggtgctct gcggctggcc caggaccgag tgccagcctc gcccttcctg
     5101 ctgctggccg acacgttcga gcagagcgat tgtgactgtt tgaagatggg tgcctgggac
     5161 tgcatcctcc gatcggacct ctcccgcctc cttccggccg tcaacctggc catggaagcg
     5221 tgtatgccct tgcggaggct atcactgcgt cagcgtgagg tgctccagct gctggcaatg
     5281 agttgctcca ccagggagat cgcacggcgg ttgcgcctga gcgtcaagac ggtggaaacc
     5341 catcgtgcgg ccgtcatgaa gcgcctggag attcaccagg tcgcgaatct ggtgcgctac
     5401 tctctgcgcg ttggcttaat tcagcgggag cagccacgag acctcgaaca cgcggtggcg
     5461 tagtcgaaca ccggtccctg aaggatccgg gaactgccaa ccaacgtgtt cttccgcagc
     5521 accctgctat gatatcatca aacaactcct cggccgaggg tgttcggcac cgtcgagagc
     5581 ctttttctaa gtctacccat gttcagtgag ttgttcccga ggctcaggat cctgctgctc
     5641 gaggatgatc cgcgcgacgc ggatctcgtg acccacacgc tcgagcgcct cgatccccga
     5701 tgttccgtgc tgcgagtgga cagccggcag gcgttcgcct ccgcgctcga caccttcgtt
     5761 cccgacgtga ttctctccga tcacgccata gccgacttca acgctctcga cgcgcttcga
     5821 ctcgcgcaag cccgcctccc tgaagccccc tttctgctcg tggccggagc gttcgagcag
     5881 tcgacctcgg aatgcttgag gtccggagcc acggacttca tccgcaagtc ggacctctcc
     5941 cgtctcggct ccgccatcga caccgccgtg aagctgcgcg agtcactgcg gcgtctctcc
     6001 aaacgccagc gtcaggtgtt gcagatgctt gccgtcgggt gctccacccg cgaaatcgcc
     6061 cgacagctgc gcctgtccgt caagacagtc gagacccacc gggcgcaggt catgcatcgc
     6121 accggcattc acgatctggc cgggctggtc cgctacgcgg ttcgagtggg aatcgtctcc
     6181 gacagtcagg ggagcgaacg ggaatctgcc ggcgatgctc cccattcggg gcatcgccga
     6241 tcgtagccgc atatttcgcc aattttgcag gttcgtggtg gtggcctccg actcaggcgc
     6301 ttcccgatgg tggctctaca ccccgctcgt taagctgaga tggggttgcc ccggtccttc
     6361 cccccacaca ttcccccgcc cccggccctc gtgcctatcc agattctgtt ggtggaggac
     6421 aacgccgccg acgtgcgcct gatgcaggag cggctctccg agaccggcgc tgtccccttc
     6481 tcgctggcaa tcgccaacag ccgggcagcc gcgctcgcgc gcctcggcgc gggaggaatc
     6541 gatgtgctcc tgctcgacct tggcctgccc gacagcagtg gcatgagcac gttcacctcg
     6601 gtgcacgccc agattcctgc gctcccgatc attgtcctca cagatgtcgc tgatcagagc
     6661 attgcgctca aagtgatgca acagggagcc caggattacc tggtgaaggg gcagctggat
     6721 ggcaatctca tctggagaac catccgatat gccatggagc ggcagcgggg tagatgcgag
     6781 ctcgtgctgt ccgagactcg ggtccgccag ttgaacgaaa gcctcgagcg ccgagttgcg
     6841 gagcgtacgg ccgagctggc tgccgccaac cgggaactgg aaacgttcac ctattcggtt
     6901 tcccacgacc tcagggctcc tctgcgtcag atcgacggct tttcccggat cctgctggag
     6961 cacgtcgagc cggcgctcga cgccaagtcg cagaactatc tccgccgaat ccaggaaggc
     7021 acccggcaca tgggccggct ggtggatgac ctcctcaatc tggctcagct ggggcggcag
     7081 gccgtgcaca cccgcgcaac gccgctggat gccatcgtga acgatgccct gagcgagctc
     7141 cgggccgact ggggcgatcg aaccatccac tggaccacgg gcggcctgcc gaccgtggag
     7201 tgcgatccgg gcctcatgaa gatcgtgttc accaacctgc tttcgaatgc catcaagtac
     7261 actcggccgc gggaggtggc gacgatcgag atagcgtgca ccgtgagcaa cggccgccgc
     7321 acgatcttca tccgagacaa cggagtggga ttcaacatga agcacgcgga caagctgttc
     7381 ggggtgttcc agcggctcca tcgggcggac cagttcgagg gtagtggcgt agggcttgcc
     7441 acggtgcggc gcatcatcca caagcacggc ggcgatatct gggccgaagc ggagtccgac
     7501 cagggcgcca ccttctcgtt cacactggct caggagggcg acagcccggc cgatgagccg
     7561 gccgttgcat ctgggtctac tcgagcccaa ccacgcagag gtggagctcg gtctggctga
     7621 actcgaagcg aggagctacc cgacatgatc gccgcgagca atcccgacgc gcgtatcctg
     7681 attgtcgacg acgagccacg caacgtcagg gtcctgaagc gtgtactggc tgtcgcgggg
     7741 taccggcagg tcctggcgat cactgatcca agggatgcca ttgcgcgctt cgcagagatc
     7801 ggacccgatc tcctgctgct ggacctgcac atgcccgaga tcgacggcgt ggccgtgatg
     7861 gagcgccttc gggctgggat gcccgcctcc gagtacttcc ccatcctgat gctgaccggc
     7921 gatgcgtcgc cccaggcgtg ccagcgggca ctcgcgatgg gagcgtctga cttcgtcgcc
     7981 aagccgttcg acatgcacga ggtgctgatc cggatcagga acctcctgga aacccggttc
     8041 ctccaccgtc aggtcgcgga gcacaatctc caactcgagc gcaaggttcg tgagcgcacc
     8101 gcagagctgg ataccgcaca gctggatacg gtcgccaggc tcgccctggc agccgagttc
     8161 cgggacgacg agaccggccg gcacacgcaa cgagtggggg cgctggcgga actcctcgcc
     8221 agggccatgg gctggagtga cgccgaagcc gccttgctgg gactcgcggc acccctgcat
     8281 gacatcggga agatcggcat tcccgacgcg attctccgca aggcggtcat gctgaccgcg
     8341 cgcgagcgga agaccatgga gcagcacacc acgatcggtg ccaggatcct gtcggggggg
     8401 cgctcgagct tcatccagct cgccgagaag gtcgcgctct cccaccatga gcggtgggac
     8461 gggcagggct accccgagcg gagagtggga ccggcgatcc cctccgccgc tcgcattgtg
     8521 gccgtggcgg atttcttcga tgcgacggtg cacgaccgag tctatcgcaa ggcttggcca
     8581 atggatgagg tgtttgccgc catcgctgcc atgagcggaa gcgccttcga tcctgcggtg
     8641 gccgagctat gcagtcgacc cgaagtgcag gaatcgatga tagtgagcag gcgtgctctt
     8701 gcccccgttg acatctcgcc gggtagcgga gacgtcactc gacccaccgg ctactcgcgc
     8761 aatcggtctg agcgccgggt tcgccgatcg gtctgagctc ttgctcctga cctgcgcggc
     8821 tatgtagtct ccgctcatga gggttctcat caccggcacc ggcaccggcg taggcaagac
     8881 gtgggtggct tgtgccctga tccgggcact tcgggacctc gggaagcagg tgatcgcgat
     8941 caagccggtg gagaccggac gatcgggcca gccgagtgac tgggaggacg gggtgcgcct
     9001 ggccaaggca accgggcaac agcaacccgc ccaggcgatc atccggttgc ctctgccggg
     9061 agcgccagtg ctcggcggcg aaggggtgga gagcgcgatc gacttcgacg cgctgctgct
     9121 gaagatcgag cgctacatcg acggggcgga atttgggttg gtcgaaggaa tgggcgggct
     9181 gctgacaccg gtgacgtggg aatggaacat gaccgacctg gcccgcgatc ttggggcctg
     9241 tgccctggtc gtggcggaag accggctcgg cacgatcaac cacaccctgc tcactctcag
     9301 cgcgctcgag ctcgccggca tcccctgcgc gggtgtcgtg ttgaccactc cggaaacgac
     9361 cgaccggtcc accggcgtca acgctgcggc catcgcccgg ctatcgggcg tcgatcgggt
     9421 gatggcggtg ccgcgggcgg ccgatcccgg cgacgccgct gcgccgatgg tccaggtggt
     9481 tggctggctc ggccgggtcg cggcgcctgc ctgaaggctg cttggctact
//
LOCUS       DASYRV010000570         1974 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3477290, whole genome shotgun sequence.
ACCESSION   DASYRV010000570 DASYRV010000000
VERSION     DASYRV010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1974
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3477290"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..223
                     /locus_tag="VGQ24_15105"
     CDS             <1..223
                     /locus_tag="VGQ24_15105"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEV8456225.1"
                     /translation="QGFSTYQHEPSVAAMVPLIGEDTIMWGSDYPHPDGIWPDSQKWI
                     AKDLGAVSPAVQRKILCENAGKLYGLLDG"
     gene            220..1029
                     /locus_tag="VGQ24_15110"
     CDS             220..1029
                     /locus_tag="VGQ24_15110"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEV8456226.1"
                     /translation="MTARGDGAFTEEFVEAAGLRIQLRRGGTGAPLLILHGELGVPGW
                     LRAYAQLAERFTVYVPSLPGFGQSARPDWIASVRDLAAWVTWCVRDLGLSPPLPVIGF
                     SLGGWIAAEIATMNAGLFTKMVLVGAAGLQPEEGQVWDYFIHSNTEAFAQAFCEPAKA
                     AEYSQYYGKTWTVEDETRAEQNREMAARLLWKPYMRSHTLPALLRGIATPTLVVWGRE
                     DRIIPLDVCQRYARTIPGATARVLDGCGHLPEMEQPEAFVRVVLDFLALST"
     gene            1057..>1974
                     /locus_tag="VGQ24_15115"
     CDS             1057..>1974
                     /locus_tag="VGQ24_15115"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEV8456227.1"
                     /translation="MVKEVYFFTEMGYTAYPQDEARRRGYNNLMFPNEHFSPERAQQL
                     YGMYFEELQYATEAGFDGVMINEHHNNPLSMMPSVNVIGAALARTTRKGRIVFLGNVL
                     PIHENPLRVAEEVAMIDILSGGRVVCGFVRGLGQESIATNTNPIYNRERFDEAHNVII
                     KAWTTPGPFRWEGRHFEYRVVNPWVRPLQKPHPPIWIPGVVSPESVRWAAEHRYPYVA
                     LAPPLNVIEEIYDLYDEVAAATGFAPTSEHRGYAIRVSVADTDEKAYEEGRHFFWQLG
                     TSFGVAPRHWQTPPGYMSREAARSRRHQAR"
BASE COUNT          344 a          666 c          662 g          302 t
ORIGIN      
        1 acaggggttc tcgacttatc agcacgagcc gtcggtggcg gccatggtcc cgctcatcgg
       61 cgaggacacc atcatgtggg gctcggacta cccgcacccc gacgggatct ggcccgactc
      121 gcagaagtgg atcgccaagg acctcggggc cgtgagcccg gccgtgcagc gcaagattct
      181 ctgcgaaaac gccggcaagc tctacggtct gctcgacgga tgacggcgcg cggggacggc
      241 gccttcacgg aggagtttgt cgaggccgcg ggcctccgca tccagctccg tcgcggcggc
      301 accggagcgc cgctgctcat cctgcacggc gagctcggcg tccctggctg gcttcgcgcg
      361 tatgcgcagc tcgccgagcg cttcaccgtc tacgtgccat cgctcccggg cttcggccag
      421 tcggcgcgcc cggactggat cgccagcgtg cgcgacctcg ccgcctgggt cacctggtgt
      481 gtccgcgacc tcggactgtc gccgcccctg cctgtcatcg gattctctct ggggggctgg
      541 atcgcggcgg agatcgccac catgaacgcc gggctcttca ccaagatggt gctggtgggc
      601 gcggcaggac tgcagccaga ggaaggccag gtctgggact acttcatcca ctccaacacc
      661 gaggcgttcg cccaggcatt ctgcgaaccg gcgaaggccg cggagtactc gcagtactac
      721 ggcaagacct ggacggtgga ggacgagaca cgggcggagc agaaccggga gatggcagcc
      781 cgtctcctct ggaagccgta catgcggagc cacacgctgc ccgccttgtt gcgggggatc
      841 gcaacgccca cgctggtggt ctggggccgc gaggaccgga tcatccccct cgacgtgtgc
      901 cagcgctatg cgcggacgat cccgggggcg acggcaagag tcctggatgg atgcggccac
      961 ctgcctgaga tggagcagcc cgaagcgttc gtgcgggtgg tgctagactt cctcgccctg
     1021 agcacctgac gcaaggtccc gagcaggagg gccggtatgg tcaaggaagt ctacttcttc
     1081 accgagatgg ggtacacggc gtatccccag gatgaagcgc gccggcgcgg ctacaacaac
     1141 ctcatgttcc ccaacgagca cttcagcccc gagcgcgcgc agcagctcta cggcatgtac
     1201 ttcgaggagc tgcagtacgc caccgaagcc ggcttcgacg gggtcatgat caacgagcac
     1261 cacaacaacc cgctcagcat gatgccgtcg gtcaacgtga tcggcgccgc cctcgccaga
     1321 acgaccagga agggccgcat cgtctttctg ggcaacgtgc tgcccatcca tgagaacccg
     1381 ctgcgggtgg ccgaagaggt cgccatgatc gacattctct ccggcgggcg ggtcgtctgc
     1441 ggcttcgtgc gtggtctggg ccaggaaagc atcgccacca acaccaatcc gatctacaac
     1501 cgcgagcggt tcgacgaagc gcacaacgtg atcatcaagg cctggaccac gcccgggccg
     1561 ttccgctggg agggcaggca cttcgaatac cgcgtggtga acccgtgggt ccggccgctg
     1621 caaaagccgc atcccccgat ctggattccc ggggtggtca gcccggagtc ggtccgatgg
     1681 gccgccgagc accgctaccc gtacgtggcg ctcgcgccac ccctgaacgt catcgaggag
     1741 atttacgatc tctacgacga ggtggcagcg gccacgggat ttgccccgac ctcggagcac
     1801 cgcgggtacg ccatccgggt gagcgtcgcc gacaccgacg agaaggccta cgaggaaggc
     1861 cggcacttct tctggcagct gggcacgtca ttcggggtcg caccgcgcca ctggcagacg
     1921 cccccggggt acatgagccg ggaggccgcg cgcagccggc ggcatcaagc gcgg
//
LOCUS       DASYRV010000571         4224 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3478308, whole genome shotgun sequence.
ACCESSION   DASYRV010000571 DASYRV010000000
VERSION     DASYRV010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4224
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3478308"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..886
                     /locus_tag="VGQ24_15120"
     CDS             <1..886
                     /locus_tag="VGQ24_15120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456228.1"
                     /translation="VEGGLHTQYPALPVSAFWDLVPDPIFGKVIRYNQDPALNLLKPD
                     GTPTGPGRIATHGVALGVKGRPNASWWVTPPTIRFADTTVSFPTHVWVRQFFRADSLW
                     TTLGPGGNGDYKTMFLRYWNSAARHELHVGIQERGLWHSGGNPGLTLTETGTGPLQNV
                     QSINQQYGVQGWPVVDIWPLVSALTARPNNTPKFGPGNGEWIEIVLHHKTIGNRLEAT
                     AYWREYTVGGVVNPQPWKISDKYEVADPASGLGWIGLARYEMGVNRNAGYKNVAHIYW
                     GPYEVVDGSVYPNPWNLP"
     gene            999..2069
                     /locus_tag="VGQ24_15125"
     CDS             999..2069
                     /locus_tag="VGQ24_15125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456229.1"
                     /translation="MSILPPHMPLLHSVFILNVIAIAATGPAPIVSTSKTNGATIQQP
                     SKPEAYETIIKRDWSTAPDKAELERFFIVEGGLNECKTPNKQSDGTLCDPHLPVSDFY
                     DLIPDPLFGKVIRYNGGPQLNTTAKNMPGRVAKHPVGLRAAYTHLWVRQFIRFSPNFT
                     TMSKTGGQGGPSYKVMFLRYEHSAARHEFDIDNPRGVFHKGGNPGLTKVSQGQLPWHN
                     TVDMNTLYPGAGWFGPDFYPFIKVPGPYPAAPSRSSPYGNGNGEWIEVVLHHKTVAER
                     GEFTMYWRQYTLRGEVVPQAWKIHAVFMTAQAGQVFPGVTIYLMGVNRNRQYDEPMFV
                     YWGPYEIVDGSRYPNPWNLPGG"
     gene            2282..2998
                     /locus_tag="VGQ24_15130"
     CDS             2282..2998
                     /locus_tag="VGQ24_15130"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025033.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEV8456230.1"
                     /translation="MLELLRDQAARDPNEFHRFLWTHHLAYAESYEVEQRFGTDQLHA
                     SRRLLFDDLKASLRARRIDPAKDIHSVFEVGCSLGYLLRFAETQLFPAAEILEGNDID
                     AYAVREGTRYLESVGSRVRLHHADMTELDRVMGTRRFDVVLCPGVLMYLREEAAGSVV
                     TSILRHTGRVAAFAGLAHPARDNRELAVAEVRERDGTFIHNIDRLVERAGGRVIFRRW
                     EGARQVDGNTIYFVFAEPEA"
     gene            2995..3915
                     /locus_tag="VGQ24_15135"
     CDS             2995..3915
                     /locus_tag="VGQ24_15135"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456231.1"
                     /translation="MSVAAARFRFERIRCRLAAALDRGLGRKRTVYVEERTEEYRRYW
                     EEGARLNDAELVPLTEDIWEIRRGDRRVRITKYLTPCDDPATRRLAGDKPYCYSVARS
                     IGIPVPEHIVVAGEELVAAHRFLAETNGPVVVKPARGSSSGLGVSTNVRSRPALIRAA
                     ALASLYCPAVIVERMIPGESCRLLFLAGHLIHAVRRGGLPDGRETRELRTVYDETVTA
                     LCSPALVSDLAELVRTLGSEFAGIDLICNDLGKPLSESGGTFLEINTTPGIHHHYITP
                     DDFAPNPVAKLVLAYLLGERRRQGVSHGLA"
     gene            3902..>4224
                     /locus_tag="VGQ24_15140"
     CDS             3902..>4224
                     /locus_tag="VGQ24_15140"
                     /EC_number="4.4.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF014709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphosulfolactate synthase"
                     /protein_id="HEV8456232.1"
                     /translation="MASRDSQPVSGKLRFVDYLKRINVRTLTPATSPFDPGYDPVTVE
                     SHLEQSHHMMSVLKISMACWLIADEACTRRKVAAAKKYKVPTTTGGGPFEVAMAQGQL
                     EAYLDL"
BASE COUNT          792 a         1323 c         1347 g          762 t
ORIGIN      
        1 cgtggagggc gggctgcaca cccagtaccc cgcgctgccg gtgagcgcgt tctgggatct
       61 ggtgccggac ccgatcttcg ggaaggtgat ccgctacaat caggacccgg cgctcaactt
      121 gctcaagccg gatggcaccc ccaccggccc cggccggatt gccacccatg gtgtcgcgct
      181 cggcgtgaag ggacgcccga atgcgagctg gtgggtgacg ccgcccacca tccggttcgc
      241 cgataccacg gtgtccttcc cgacgcacgt ttgggtgcgg cagtttttcc gggccgactc
      301 gctgtggacc acgctcgggc ccgggggcaa tggcgattac aagacgatgt tcctgcgcta
      361 ctggaactcg gcggcgcgcc acgagctgca cgtcgggatc caggagcgcg ggctttggca
      421 ttcgggcggc aatcccggcc tcacgttgac ggagaccgga acgggccccc tgcagaacgt
      481 ccagagcatc aatcagcagt acggcgttca gggctggccc gtggtggata tctggccgct
      541 ggtttccgca ttaaccgcgc ggcccaacaa cacgcccaag ttcgggccag gcaatgggga
      601 gtggatcgag atcgtgctgc accacaagac gatcgggaat cggctcgagg ctaccgcgta
      661 ttggcgcgag tacaccgtcg gcggggtggt gaatccgcag ccctggaaga tcagcgacaa
      721 gtacgaagtg gcggatccgg cgagcgggtt gggctggatc gggttggcgc gctatgaaat
      781 gggcgtgaac cgcaatgccg gctataagaa cgtcgcgcac atctattggg ggccctacga
      841 ggtcgtcgat ggctcggtct atccgaaccc ctggaacctg ccctgagagt gaggctaact
      901 gggtgccccg caagaccgtg agaggcagta gccactagac tcgagcgctc atccggctgg
      961 tggcgccgtc cgcgccacct gcacagatta cagcagcgat gagtatcctg cccccgcaca
     1021 tgcctctgct gcattccgtg ttcatcctga acgtgattgc gatcgcggca accgggcctg
     1081 cgccgattgt cagcacgtca aagacgaatg gcgcgacgat tcagcagccc agcaaaccgg
     1141 aagcctacga gaccatcatc aagcgagatt ggagtacggc tccggacaag gcggaactgg
     1201 aaaggttctt cattgtcgag gggggactca acgaatgtaa gaccccgaat aagcaaagcg
     1261 acgggacgct ctgcgacccg caccttccgg tcagcgactt ctacgatctc atccctgatc
     1321 cgctgttcgg caaagtcatc cggtacaacg gaggcccgca gctcaacacc acggcgaaga
     1381 acatgcccgg aagagtggcg aagcatcccg tcggcctcag agccgcgtac acccatctct
     1441 gggtccggca attcattcga ttcagcccga acttcaccac catgagcaag accggaggac
     1501 agggcgggcc ctcttacaag gtgatgtttc ttcggtacga gcattcggca gcgcggcatg
     1561 agttcgacat cgacaatcca cgcggcgtgt ttcacaaagg tggcaatccg ggcctcacga
     1621 aggtgagcca ggggcagctt ccgtggcaca acaccgtgga catgaacacg ctgtatccgg
     1681 gcgcaggctg gttcggaccg gatttctatc ccttcatcaa agtcccggga ccatatccgg
     1741 ctgctccgtc ccgcagctca ccctatggga atggaaatgg ggaatggatc gaggtggtcc
     1801 tccaccacaa gaccgtagcc gagcgcggtg agttcacgat gtattggaga cagtacaccc
     1861 tgcgcggcga ggtggtcccg caagcatgga agatccatgc tgtgttcatg acagcccaag
     1921 ctgggcaggt atttcccggg gtaacgatct atctgatggg ggtaaatcga aaccgacaat
     1981 acgacgagcc catgttcgtc tattggggtc cgtatgagat cgtagacgga tccaggtacc
     2041 ccaacccctg gaatctgccg ggtggctgag ttgcagaacc gagtccccga taagcccccc
     2101 catcaaccta ccgcagcctt gccggcttct acgaagtgat tgcggcccgc tcgcaccgga
     2161 gatcctgatc ggtaccgcga gactgcgcgg ctggctacgc tcggccttac cgcttggtat
     2221 gcgaaggcgg cttgcggtat tggtgggaag gcagcgatgg cttccggaca gggcctggtg
     2281 ggtgctcgag ctgctgcggg accaggcggc gcgtgatccc aacgagttcc atcgcttcct
     2341 ctggactcat cacctggctt acgcggagag ttacgaggtt gagcagcggt tcgggaccga
     2401 ccagctccac gcctcacgcc ggctgttgtt cgacgacctc aaggcgagcc tgcgtgcgcg
     2461 caggatcgat cccgccaagg atattcactc ggtattcgag gtcggctgct cgctgggcta
     2521 cctgctccgg ttcgcggaga cccagctctt ccctgcggcc gagatcctgg aaggcaatga
     2581 catcgacgcc tacgccgtgc gggaaggcac tcgatacctc gaaagcgtgg gctctcgggt
     2641 caggctgcac cacgcggaca tgacggagct cgatcgagtc atgggcacgc ggcgattcga
     2701 cgtggtgctt tgtcccggcg tcctcatgta tcttcgcgaa gaagctgccg gctctgtggt
     2761 gacgagcatc ctccggcata ccggccgggt tgccgcattc gccggtctgg cgcaccctgc
     2821 tcgcgacaac cgggagctcg cggttgccga ggtccgcgag cgggatggga ccttcattca
     2881 caatatcgac cggctggtgg aacgagccgg cggccgggtg atcttccgac ggtgggaagg
     2941 ggcacgccag gtggacggca acaccatcta cttcgtcttt gccgagcccg aggcgtgagc
     3001 gttgctgcag cgcggtttcg cttcgagcgc atccgctgcc ggctcgccgc cgcgctcgac
     3061 cggggactgg gacgcaagcg caccgtctat gtggaggagc gcaccgagga ataccgtcgc
     3121 tactgggaag aaggagcgcg gctcaatgac gcggagctcg tcccgcttac cgaggacatc
     3181 tgggagatcc gccgcgggga ccgacgggtt cgaatcacca agtacctgac tccctgcgat
     3241 gaccccgcca cccgccggct cgcgggcgac aagccctact gttactccgt ggcccgctcc
     3301 atcgggatcc ccgtgccgga gcacatcgtc gtggctggtg aggagctcgt agcggcgcac
     3361 cgatttctcg ctgagacgaa tggaccggtg gtggtgaaac cagcgcgtgg ctcgagctcc
     3421 ggattaggtg tcagcacgaa tgtgcggagc cggcccgccc tcatccgggc ggcagcactt
     3481 gcctcgcttt attgccctgc tgtgatcgtc gagcgcatga tccccgggga atcctgccgg
     3541 ctgcttttcc tggccggcca tttgattcac gcggttcgcc gaggtggcct gccggacggc
     3601 agggagactc gcgagctccg cacggtgtac gatgagacgg ttacggcgct ttgcagcccg
     3661 gctctcgtca gcgacctggc ggagctggtg cgcacactgg gtagtgaatt cgccggtatc
     3721 gatttgattt gcaacgactt aggcaagccg ctctcggagt cgggcggcac gtttcttgag
     3781 atcaacacta ctccagggat tcatcaccac tatatcaccc cggatgactt tgccccgaat
     3841 cccgtggcga agctagtcct ggcctacctt ctcggcgaac gccggagaca gggggtttcc
     3901 catggcctcg cgtgactcac agccggtctc cggcaagctc cgctttgtgg actacctcaa
     3961 gaggatcaac gtccgcaccc tcacgcccgc gaccagcccc ttcgacccag gctacgatcc
     4021 ggtcacggtc gagagtcacc tcgagcaaag ccaccacatg atgtcggtgc tcaagatcag
     4081 catggcgtgc tggctgatcg ccgacgaggc ctgtacccgg cgcaaggtcg ccgcggccaa
     4141 gaagtacaag gtgcccacga cgaccggtgg cggccccttc gaggtggcga tggcgcaggg
     4201 ccagctcgag gcctatctcg atct
//
LOCUS       DASYRV010000572         2448 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3266645, whole genome shotgun sequence.
ACCESSION   DASYRV010000572 DASYRV010000000
VERSION     DASYRV010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2448
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3266645"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..834
                     /locus_tag="VGQ24_15145"
     CDS             <1..834
                     /locus_tag="VGQ24_15145"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8456233.1"
                     /translation="NFLKGGLTFSDAVATVSPTHAHELRTVRGGFGLHDTFISLRNRF
                     SGIINGIDFKEWNPETDKIITARYSRGDLKGKKRCKAALQRSFGLPQRQRMPLFVMTA
                     RMTSQKGLELIVGDYTLFMLEAQFIFLGVGEPRYEAMLKHYAARWPERISVHLGFTEK
                     IEHRLMAGADVYLMPSLYEPCGLAQMRAQRYGAVPLARRVGGIADTVEDGVTGFLFDE
                     YSSEDLLRVSRTVMDYYNDEDVWQRLMKEGMSRDFSWERSGEKYIELYQRVLTSPPVQ
                     A"
     gene            840..>2448
                     /locus_tag="VGQ24_15150"
     CDS             840..>2448
                     /locus_tag="VGQ24_15150"
                     /inference="COORDINATES: protein motif:HMM:NF015052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein
                     domain-containing protein"
                     /protein_id="HEV8456234.1"
                     /translation="MDVVFVLHSHLPYVLNHGRWPHGSDWLCEAAVHSYLPLLEQLLR
                     LEDENTPTPMTLGITPILANQLGHPAFRRELEDYFEHRIAAAEKAIRTFQASGETELA
                     PVAEYWQRRYHRLADCFGRLDGDLITAFRRLEDRGRLELLGSAATHGMLPLLGRDESI
                     RLQLLLGRQEHQRTFGRAPRGCWLPECAYRPAGRWAPLPKAPSHLRRVGLEDHLAHAG
                     FQFFLTDSHLAHAGRAHEVYATQKLERELLPVPSADPPQHTPYSSYRLFSRPSLGVLI
                     RDPVATRQVWSRYEGYPGDAAYLEFHKIRWPEGLRLWRVSAPKSDLADKQPYRPDAAR
                     RRASLHARHFVSLLGETARDQGTSDGAIVAPFDTELFGHWWHEGPEFLSQTWQVMSRH
                     AGVTAATASRYLTQHPPELALSLEEGSWGANGDFSMWMNPKTEWMWLRMWDLEAAFWN
                     ATPDAISNAAAHPALEQAARELLLAQASDWPFIVSTGAAADYAEQRFTGHCDRVAALL
                     RGLGSGELESATRMADEFRRQDDVFPEV"
BASE COUNT          429 a          800 c          782 g          437 t
ORIGIN      
        1 aacttcctga aaggcgggct gacgttctcc gacgcggtgg cgacggtgag cccgactcac
       61 gcgcatgagc tgcgcacggt gcgcggcgga ttcggactgc acgacacctt catctcgctc
      121 cgtaaccggt tctccggcat catcaacggg attgatttca aggagtggaa cccggagacc
      181 gacaagatca tcacggcccg atactccagg ggcgacctca agggcaagaa gcgctgcaag
      241 gcggcgctgc agcggagctt tgggctcccc cagcggcaac ggatgccgct tttcgtcatg
      301 accgcgcgga tgacgtcgca gaagggcctc gagctgatcg tgggtgacta caccctgttc
      361 atgctggaag cgcagttcat ctttctcggt gtgggcgagc cccgctacga ggcgatgctc
      421 aagcactatg cggcccgctg gccggaacgg atcagcgtgc acctcggatt caccgagaag
      481 atcgagcatc ggttgatggc gggggcggat gtgtacctca tgccctcgct ctacgagccc
      541 tgcggcctgg cccagatgcg cgcgcaacgc tatggcgccg tgccgctggc ccggcgagtc
      601 ggcggcatcg ccgatacggt cgaggacggc gtcaccgggt tcctgttcga tgagtattcc
      661 tcggaagatc ttctccgagt ctcgcggacc gtgatggatt actacaacga cgaagacgtc
      721 tggcagcggc tgatgaagga aggcatgtcc cgggatttca gctgggagcg atcgggcgaa
      781 aaatacatcg aactttacca gcgcgtgctg accagcccac cggtccaggc ctgatccgca
      841 tggacgtggt attcgtcctc catagtcacc ttccctacgt tctgaatcac ggccgctggc
      901 cccacggcag cgattggctc tgcgaagccg ccgtccacag ttacctcccg ctgctcgagc
      961 agttgctgcg cctcgaagat gaaaacactc ccacccccat gacgcttggt atcaccccga
     1021 tcctcgcgaa tcagctgggg cacccggcgt tccgacggga gctggaggat tacttcgagc
     1081 accggatcgc cgcggccgag aaagcgattc ggacgttcca ggcttccggc gagaccgagc
     1141 tcgcgcccgt cgcggagtac tggcagcggc gttaccacag gctggcggac tgttttggcc
     1201 ggctcgatgg tgatctgatc accgcgttcc ggagactgga ggaccggggc cggctggagc
     1261 tgctgggatc cgctgcgact cacggcatgt tgccgctcct cggccgggac gaaagcattc
     1321 ggctccagct gctcctgggc cggcaggaac accagcgcac cttcggccgg gctccccgcg
     1381 ggtgctggct ccccgaatgc gcctatcgtc cggcgggccg ctgggcaccg cttccgaaag
     1441 ctccgagtca tctccggcgt gtgggtctcg aggatcacct cgctcacgcc ggttttcagt
     1501 tctttctgac cgattctcac ctggcgcacg ccggccgcgc gcacgaggtc tacgcgactc
     1561 aaaagctcga gcgcgagcta ctgcccgtcc ccagcgccga cccgccccag cacactccgt
     1621 attccagcta ccgcctgttt agtcgcccat cgctcggagt tctgatccgg gatccggtcg
     1681 ccacccgaca ggtctggagc cgatacgaag gatacccggg cgatgcagcg tatctcgagt
     1741 ttcacaagat ccgctggccg gaggggcttc ggttgtggcg ggtcagtgcc ccgaaaagcg
     1801 atctggctga caagcaaccc tatcgtcccg acgcggcacg acgccgggcg agtctgcacg
     1861 cccgtcattt cgtgtcactc ctgggcgaga cggctcgcga ccaggggact tcggatggcg
     1921 cgatcgtcgc accgttcgac accgagctat tcggccactg gtggcacgag ggccccgagt
     1981 tcctgagcca gacctggcag gtcatgtccc gtcacgccgg agtgacggcc gcgaccgcct
     2041 cgcggtacct gacccaacac ccgcccgaac tcgcattgag cctcgaggaa ggatcctggg
     2101 gcgccaatgg cgacttctcc atgtggatga atccgaagac cgaatggatg tggcttcgca
     2161 tgtgggacct ggaggcggca ttctggaatg ccacgccgga tgcgatcagc aacgccgcgg
     2221 cacacccggc gctggaacag gccgcacgag agctcctgct ggcccaggcc tcggattggc
     2281 cgttcatcgt cagcaccgga gcggccgccg attatgccga gcagcgtttc accggccatt
     2341 gcgaccgggt ggcagcactg ctccgcggat tgggaagtgg tgagctggaa agcgcgactc
     2401 ggatggccga tgagtttcgc cgccaggacg atgtgtttcc cgaggttc
//
LOCUS       DASYRV010000573         5648 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3267813, whole genome shotgun sequence.
ACCESSION   DASYRV010000573 DASYRV010000000
VERSION     DASYRV010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5648
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3267813"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1281)
                     /locus_tag="VGQ24_15155"
     CDS             complement(<1..1281)
                     /locus_tag="VGQ24_15155"
                     /inference="COORDINATES: protein motif:HMM:TIGR02262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016405 - CoA-ligase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoate-CoA ligase family protein"
                     /protein_id="HEV8456235.1"
                     /translation="MTVEHPAHLNIADFFLDARVREGRGDRTALLTDAGRLSYREVQA
                     LANRYANVLSSAGVAPEQRVIIALPDGPDYVAALFGILKIGAVVVMVNPELKPDAIEY
                     FFEYSRAAVALVAAERADAFRAAASRAAHAPALLVVGTSDWESRLAAAPEIWRNFPTH
                     RDDAAIWLFSGGTTGRPKAAVQPHRSFVNTAQCYASRVLCYTENDVTLSVPKLYFGYA
                     TGSNLLFPFAAGATSVLFHDRCTVEVIFSRIARYRPTILITVPTMINQMVSHPEAGHQ
                     DFSSLRLATSAGEGLPEELHARWDRTFGVPLLDGLGTAEMWHIFLSNRLGRVHRGTLG
                     EVVPGFEIKVADEEGREVPDGTIGHLWVRGGSRALGYWQQLEKSQTCFRGEWVVTGDL
                     VRRDADGYYTYGGRADELLKVSGKWLSATEVEGCL"
     gene            1267..2088
                     /locus_tag="VGQ24_15160"
     CDS             1267..2088
                     /locus_tag="VGQ24_15160"
                     /inference="COORDINATES: protein motif:HMM:NF014670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HEV8456236.1"
                     /translation="MFDSHGWNPRLGGEDTITVQPLAAMTWEEARDVAGPGSATILPV
                     GAIEAHGPHLPLETDVIIAQAMARSGAARLAARGLRVVVLPPLTYTAAAFAQGFAGTL
                     SLRPETVTATVRDIAGGLIRHGFGVLAIANAHLDPGHLASLEAAVNAIRRDVGLAVAF
                     PNLAAKPWALRLSDEFRSGACHAGQFETSMVMAERPELVRDATRAVLPPNPVSLSRAI
                     RDGKQSFEEAGGARAYFGFPAQATAEEGRATIEILGAILDEAVQAELGARTGQAK"
     gene            2085..3263
                     /locus_tag="VGQ24_15165"
     CDS             2085..3263
                     /locus_tag="VGQ24_15165"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEV8456237.1"
                     /translation="MNNPAGRVAVVTGAGRGIGAATARALADAGLSVVVAARNRDQIE
                     RRSAELVALGHGAKAVVCDVTSEASVQALAGEAAELGPVAVLVNNAGAAASMPVVRTS
                     LEDWNRLMAVNATGAFLCTRAFLPGMLERQWGRVVNVASTAGLSGGKYLAAYSAAKHA
                     LVGLTRSVAAEVAGTGVTVNAVCPGFVDTEMTTETVARIVAKTGRTREDALAAALASA
                     GQTRLISAAEVAAVVVSLATAAVTDPPNGEALVLEGRDPMSGRFAIVNPEELGAPRGW
                     NNGMLARAGGRTLFIAGQTARDSSGQVPPGDFVSQFDRALGNVLAVLREAGGEPGDIG
                     RFTIYVTDMAQYRASLEPLAEVYRRRMGTHFPAMALVEVTSLVDPHAAVEIEATAVLG
                     "
     gene            3321..4121
                     /locus_tag="VGQ24_15170"
     CDS             3321..4121
                     /locus_tag="VGQ24_15170"
                     /inference="COORDINATES: protein motif:HMM:NF006107.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase family protein"
                     /protein_id="HEV8456238.1"
                     /translation="MALSPRSFLYTVDSTSAVATITLNRPERLNALTFEVYTELRDTF
                     RALDIEPGVRAVIITGTGRAFCTGGDVEDIIGSLFSRDAAGLLEFTRLTGDLILSIRQ
                     CRRPVVAALNGTVAGAGAVIAAASDIRIAAESAKIAFLFSRVGLTGADMGAAWLLPRI
                     VGLAQASELLMLGDFITAERAAEIGLYNRVVPVERLMTEATDFAARLARGPSVALGVT
                     KQALNQEAAMDLVSALEAEAQAQAACMKNPNFREAYEAFRAKRDPKFE"
     gene            4125..5261
                     /locus_tag="VGQ24_15175"
     CDS             4125..5261
                     /locus_tag="VGQ24_15175"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEV8456239.1"
                     /translation="MPDTRLIRTFLEPRHMTLAERAGDFASDEIAPRPEPVEDTDARR
                     EARALLGLLGAEGWLQPIFDLDLRGCCLMREALAEASPLADAVFALQGLGTTPILLGG
                     SHAQKDRWVGPIAKGTAMTAFAMTEPEAGSDVAGIATTARREGSGYTLNGTKTLISNA
                     GIADLYTVFASTDRTKGSKGISCFLVPGDAPGLRFVGAQVLSAPHPLGEITFEDCRVP
                     ADALLGTEGRGYGLGLATLDRLRPTVAAAACGMAARALAESLVHVKQRHQFGTPLAQF
                     QLVQQKLARMATHLTAARLLTYRAAYEKDQGQERITSEAAMAKSFATEMAQRAVDDAV
                     QLIGGRGVLADHPVERLYRAVRALRIYEGTTEIQQLIIAGELLK"
     gene            5285..>5648
                     /locus_tag="VGQ24_15180"
     CDS             5285..>5648
                     /locus_tag="VGQ24_15180"
                     /inference="COORDINATES: protein motif:HMM:NF012703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginase family protein"
                     /protein_id="HEV8456240.1"
                     /translation="MPRFAVIDAPSVLGLRPTGVEHLPGALKAAGLLAALNADYAGQV
                     EPPPYDPGRDPETLILNPDALRAYALRLAAAVADVLRQGRFPLVLGGDCSNIIGIMLA
                     LRRARRYGLCFIDGHADFY"
BASE COUNT          910 a         1870 c         1969 g          899 t
ORIGIN      
        1 caggcagcct tctacctcgg tggcagagag ccacttaccc gacactttga gcagctcgtc
       61 ggctcggccg ccgtaggtgt agtagccgtc ggcatcgcgg cgaaccaagt ctcccgtcac
      121 cacccactca ccccggaaac aggtctggct cttctccaac tgctgccagt agccaagcgc
      181 ccgcgatccg ccccgaaccc agaggtgtcc gatggttccg tctggcacct cccgaccctc
      241 ctcatccgcc accttgatct cgaagccggg cacgacctcc cctagcgtcc cacggtgaac
      301 ccggcccagc cgattggaga ggaagatgtg ccacatctcc gccgtgccga ggccgtcgag
      361 gagcggaacg ccgaaggtcc ggtcccaccg ggcgtgcagc tcctcgggca acccctcgcc
      421 cgcggaggtg gccaggcgta atgacgagaa atcctggtgg ccggcctccg gatgactcac
      481 catctgattg atcatggtgg ggacggtgat caggatggtc ggccggtacc gtgcgatccg
      541 gctgaagatg acttccacgg tgcagcggtc gtggaacagc acgctggtgg cgccggcggc
      601 gaagggaaac aggagattgg agccggtagc atagccgaaa tagagtttag gcaccgagag
      661 cgtcacatcg ttctcggtgt aacagaggac cctgctggcg tagcactgcg cggtgttgac
      721 gaacgagcga tgcggctgca cggcggcttt ggggcggccg gtggtgccgc cggagaagag
      781 ccagatggcg gcgtcgtcac ggtgggtggg aaagttccgc cagatctcgg gtgccgcagc
      841 gaggcgcgac tcccaatcgc tcgtgcccac gaccagcaac gcaggcgcgt gggcagcccg
      901 gctggccgcg gcgcggaacg cgtcggcccg ctccgcggct accaatgcca cggcggcgcg
      961 gctgtactcg aagaaatact cgatggcgtc gggcttgagc tccgggttga ccatcactac
     1021 gaccgcgccg atcttcagga tgccgaacag cgcggccacg tagtcaggcc cgtcgggcag
     1081 ggcgatgatc acacgctgtt ccggagccac tcccgccgaa ctgagcacgt tggcataccg
     1141 gttggccagt gcctgaactt cacggtaact caagcgcccg gcatcggtca gcagcgcggt
     1201 ccggtctccc cggccctcgc gcacccgggc atcgagaaag aagtcggcga tgttgaggtg
     1261 cgccggatgt tcgacagtca tggctggaat ccccgactgg gcggtgagga cacaataacg
     1321 gtgcagccgc tggccgcaat gacatgggag gaggcacggg acgtcgccgg cccgggatcc
     1381 gccaccatcc tgccggtggg cgccatcgag gcccacggcc cgcacctgcc gctggagacg
     1441 gacgtgatca tcgcccaggc gatggcgcgc tccggcgccg cccggttggc cgcgcgtgga
     1501 ttacgcgtcg tagtgcttcc cccgctgacg tacaccgccg cggcatttgc ccaggggttc
     1561 gccggaacgc tctcgctccg cccggagacg gtcacggcga ccgtgcggga tatcgccggt
     1621 ggcctgattc ggcatggatt cggagtgctg gccatcgcca acgcgcacct cgatccggga
     1681 cacctcgcct cgctggaggc ggcggtaaac gcgattcgac gcgacgtcgg gctggcggtg
     1741 gcatttccca acctcgcggc caagccgtgg gctctgcggc tgagcgacga gttccgcagc
     1801 ggcgcctgcc acgccggcca gttcgagact tcgatggtga tggccgaacg cccggagctg
     1861 gtgcgtgatg ccaccagggc agtcctgcca cccaatccgg tatcgctttc ccgtgccatt
     1921 cgggatggca agcagagctt cgaggaggcg ggcggcgccc gggcctactt cgggtttccg
     1981 gcccaggcta ccgccgagga aggccgggcg accatcgaaa tcctcggcgc gattctcgac
     2041 gaagcggttc aggccgagct cggcgccagg accgggcagg cgaaatgaat aacccggccg
     2101 gtcgggtggc ggtggtgacc ggcgccggtc gggggattgg agccgccacc gcccgagcgc
     2161 ttgcggacgc cggtctcagc gtggtggttg ccgcccgcaa tcgagaccag atcgagcggc
     2221 ggagcgccga gctggtggcg ctgggccatg gggcgaaagc ggtggtctgc gacgtcacca
     2281 gcgaagcgag cgtgcaggcc ctcgctggcg aagccgccga gctgggaccg gttgcggtgc
     2341 tggtcaacaa cgccggcgct gctgcttcga tgcctgtcgt ccggacctca ctcgaagatt
     2401 ggaaccgcct catggccgtc aatgccaccg gcgccttcct ctgcacccgc gcctttcttc
     2461 ccgggatgct cgagcggcag tggggtcgag tggtcaatgt ggcttcgacg gcggggctga
     2521 gcggcggcaa gtatctcgcg gcctactccg cggccaagca cgcgctggtg ggcctcaccc
     2581 ggtcggtggc ggcggaggtg gcgggcaccg gggtgacggt gaacgcggtg tgccccgggt
     2641 tcgtcgatac cgagatgacc accgagaccg tggcccggat cgtggccaag accggccgca
     2701 cccgtgaaga cgcgctggcg gcggcgctag cttcggcggg ccagacccgg ttgatctcgg
     2761 cggcggaggt ggcggcggtc gtggtgtcgc ttgcaactgc tgcggtcacc gatcctccca
     2821 atggcgaggc cctggtcctg gaggggagag acccgatgag cggccgcttc gcgatcgtca
     2881 accccgaaga gctcggcgcg ccccggggct ggaacaacgg gatgctggcc cgggctggag
     2941 gcaggacgct cttcatcgcg gggcagaccg cgcgcgacag ctcgggccaa gtgccgcccg
     3001 gtgacttcgt gtcccagttc gatcgggcgt tgggtaacgt gcttgccgtg ctccgcgagg
     3061 ccggcgggga accgggggac atcgggcggt tcacgatcta tgtcaccgac atggcgcagt
     3121 accgtgccag cctcgagccg ctggccgagg tgtaccggcg gcggatgggc acgcacttcc
     3181 cggcgatggc gctagtggag gtgacgtcgc tggtggatcc gcacgcggcg gtggagatcg
     3241 aagcgacggc ggtcctgggc taggccacac cacccgtggt gaatcgttgt ttccgtggtg
     3301 aacccttcga gggtgttaag atggcattga gcccgagatc tttcctctac accgtcgact
     3361 cgacgagcgc cgtcgcgacc atcaccctca accggcccga gcggctcaac gcgctcactt
     3421 tcgaggtcta caccgagctc agggatacct tccgcgccct cgatatcgag cccggcgttc
     3481 gcgccgtcat catcaccggc accggccggg ccttctgcac cggcggagac gtcgaggaca
     3541 tcatcggctc gctgttctcg agggatgccg cgggtttgct cgagttcacc cgcctcaccg
     3601 gcgatctgat tctttccatt cgccaatgtc gccggccggt cgtggcggcg ctcaatggaa
     3661 cggtggccgg cgcaggggcc gtgatcgcgg cagccagcga catccggatc gctgcggaga
     3721 gcgccaagat cgcgtttctc ttttcgcggg ttggcctgac cggcgccgac atgggggcgg
     3781 cctggctcct gccccgaatc gtcggcctgg cgcaggcgag cgagctcctc atgctggggg
     3841 acttcatcac cgccgagcgc gccgccgaaa tcgggctcta caaccgggtg gtaccggtag
     3901 agcggttgat gactgaggcg accgacttcg cagcccgatt ggcccgggga ccgtcggtgg
     3961 ccctgggagt caccaagcag gcgctcaacc aggaggccgc gatggatctg gtttccgcgc
     4021 tcgaggcgga agcccaggcc caggccgcct gcatgaagaa tcccaacttc cgcgaagcct
     4081 acgaggcctt ccgcgccaag cgcgacccga agttcgagta gggcatgccg gacacgagac
     4141 tgatccgcac ctttctcgag ccgcggcaca tgactctcgc cgagcgggcg ggcgactttg
     4201 ccagcgatga gatcgctccg cgccctgaac cggtcgaaga cactgacgcc cggagggagg
     4261 cgcgtgctct gctcgggctc ctcggtgcgg agggctggct ccagccgatt ttcgacctcg
     4321 atctccgcgg gtgctgcctc atgcgagaag cgctcgccga agcgtcgccg ctcgccgacg
     4381 cggtgttcgc gctccaggga ctcggcacca cgccgattct gctgggcgga tcgcacgcgc
     4441 agaaggaccg ttgggtcggg ccgatcgcca aggggacggc gatgaccgcc ttcgcgatga
     4501 ccgagcccga ggcagggtcg gacgtggccg gcatcgccac caccgcacgg cgcgaaggat
     4561 cagggtacac cctcaacgga accaagaccc tgatctccaa cgccggcatc gccgatctct
     4621 acaccgtgtt cgcctccacc gaccgcacga aaggttcgaa agggatcagt tgctttctgg
     4681 taccggggga tgcgccggga cttcggttcg tgggcgctca ggtgctgagc gcgccgcacc
     4741 cgctggggga gatcaccttc gaggactgcc gggttccggc ggatgcgttg ctggggaccg
     4801 agggacgtgg ctacgggctc ggcctcgcga cgctcgaccg gttgaggccc accgtggccg
     4861 ccgcggcctg cgggatggcc gctcgggcgc tcgccgagtc gctggtccac gtgaagcagc
     4921 ggcaccagtt cggcacccca ttggcgcagt tccaactggt gcagcagaag ctcgcccgga
     4981 tggccaccca tcttacggcc gcccggctcc tgacctatcg ggcggcgtat gagaaggacc
     5041 agggccagga gcggatcacc agtgaagcgg ccatggccaa gtccttcgcc accgagatgg
     5101 cccagcgggc ggtagacgac gcggtgcagc tcatcggcgg acggggagtg ctggccgatc
     5161 acccggtgga gcgcctgtac cgtgcggtac gggcactccg gatctacgag gggacaacgg
     5221 agatccagca gttgatcatt gcgggggaac tgctcaagta ggggccagtc agtagaggag
     5281 gcacatgcca cgctttgccg tcatcgatgc cccttccgtt ctcggcctga ggccgaccgg
     5341 cgtcgagcac ctccccgggg cactcaaggc tgccggcctg ctggcggcgc tgaacgccga
     5401 ctacgccgga caagtcgaac cgccgcctta cgacccgggg cgcgaccccg agacgctcat
     5461 cctcaatccc gatgctctca gagcttacgc cttgcggctt gccgcggcgg tcgcggacgt
     5521 gttgcggcag ggtagattcc cgctcgtgct gggcggcgac tgcagcaaca tcatcggcat
     5581 catgctcgcg ctcagacgtg ccaggaggta cgggttgtgt ttcattgatg gtcacgccga
     5641 cttctacc
//
LOCUS       DASYRV010000574         3459 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3268626, whole genome shotgun sequence.
ACCESSION   DASYRV010000574 DASYRV010000000
VERSION     DASYRV010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3459
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3268626"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            172..1125
                     /locus_tag="VGQ24_15185"
     CDS             172..1125
                     /locus_tag="VGQ24_15185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456241.1"
                     /translation="MSLRRTGWLQIVPILLLTPGGLLAQGERGRDVAVQMRHVDFHVD
                     SSIVLHVDYLRGALEPTSPEHSPYFDDKSSFSLAIDSARIGITPKGLSDLLNRYTFAY
                     PGSPLRRLTISIEKGRIKQQGTMRGISFTTLSDLTLTSGGELRLHPTSVKAAGIGVGG
                     LMKFFGLHLDKLVKLKGSRGVRIQKDDFFLSPPDLLPPPTVKGRVGGVEVSDSEIVQV
                     FRPPAGNEIRQLRLPNPKATNYMYYRGNVLRFGKLTMHDTDLLILDAVPEDPFDFFLD
                     EYKAQLVAGYSRTRADEGLTVVMQDYKKAPALPSRARSNPR"
     gene            complement(1122..1415)
                     /locus_tag="VGQ24_15190"
     CDS             complement(1122..1415)
                     /locus_tag="VGQ24_15190"
                     /inference="COORDINATES: protein motif:HMM:NF020317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GYD domain-containing protein"
                     /protein_id="HEV8456242.1"
                     /translation="MPTYISLLRYTQQGIAAIKQGPTRLDAAKQAYKKAGGELKAFYL
                     TIGQYDAVAIAELPDDTALARIALALGAMGNVRTETLRAFNETEFRKIVGELP"
     gene            1642..>3459
                     /locus_tag="VGQ24_15195"
     CDS             1642..>3459
                     /locus_tag="VGQ24_15195"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHYT domain-containing protein"
                     /protein_id="HEV8456243.1"
                     /translation="MHTYHHPGMVVLSIVVAILASYTALDLAGRVAAARGWARIAWLG
                     SGAIALGTGIWAMHFVAMLAFHLPVPIAYDIPLVVSSALAAFVASFLALFIASRRTLT
                     AGPLCLVGVCMGAGISVMHYTGMAAIRTAATLHYHANLVAASIAIAIIASMAALWLAF
                     RLRGDDSRRGHLLRAGASIVMGFAITGMHYTAMAAAYFAALSEPHVQAAAGVLATTGL
                     GTAVVCSTFLVLFLALLSATFDRAIERKNVELERLAWIVDSSDDAIVSRSVDGTILTW
                     NGGAERLYGYSAREAVGQRFSRFVHSGEQEVTLIRKDGTRVDVWQLESPIRNRDGVLT
                     GISSIGRDVTVAHRLKEAEHAALQAAESASRAKSDFLANMSHEIRTPMNGVMGFVDLA
                     LDTELTPEQREYLEVAKRSSDSLLGVINDILDFSKVEAGQLDLDPIPFQLGDAFADMM
                     SSLALRASKKNLELALEIAPDVPDGLVGDIGRLRQVVVNLVSNAIKFTESGEVIVRVG
                     RELNEEDAVTLHVSVADTGIGIPEDKHSTIFNAFTQADSSTTRRYGGTGLGLAISSRL
                     VQLMGGRIWVESESGVGSTFQFTTRLEPRQPGSVIEALPA"
BASE COUNT          601 a         1072 c         1091 g          695 t
ORIGIN      
        1 tggcgaacat caatcggttg cttgtctgag ccttaccctc tctcaccgaa ggagcctcgc
       61 caagtgcggg gctctttttt gtagctgagt cacgggctgg cgcggggagc cgtcccgcgc
      121 cagaatatca gcagcagtcg caccacgcga gaaccccctg ctggagtcct catgtccctg
      181 cgccgcaccg gatggctgca gatagtgccg atcctcttgt tgacaccggg cggtctcctg
      241 gcgcagggcg agcggggacg ggacgtcgcg gtgcagatgc ggcacgtcga ctttcacgtc
      301 gactccagca tcgtgctcca cgtggattac ctcaggggcg cgctggagcc cacgtccccg
      361 gagcactcgc catacttcga cgataagagc tccttctccc tggcgatcga ctccgctcgc
      421 atcgggatca cgccgaaagg gctcagcgat ctgctgaacc gctatacctt tgcctatcct
      481 gggtcgccgc tccgcagact aacgatcagc atcgaaaaag gccggatcaa gcagcagggt
      541 accatgcggg ggatctcgtt caccaccctc agcgatttga ccttgacatc cggtggggag
      601 ctgcggctgc atccgacctc cgtcaaggct gccgggatcg gcgtaggcgg attgatgaaa
      661 ttcttcggcc ttcacctcga taagctggtc aagctgaagg gctcccgcgg tgtgcggatc
      721 cagaaggatg actttttcct ttcgccgccc gatcttctgc cacccccaac ggtgaaaggc
      781 agagtcggcg gcgtcgaggt gagtgacagt gagatcgtgc aggtgttccg acccccggcc
      841 gggaatgaga tccggcaact acgtctgccg aatcccaagg ccaccaacta catgtattac
      901 cggggtaatg tcctccgatt cgggaagctc accatgcacg acacggatct attaatcctg
      961 gatgccgtgc ccgaggaccc atttgacttc tttcttgatg agtacaaggc ccagctcgtg
     1021 gccggctact cgaggacccg ggccgatgag ggtctgaccg tcgtgatgca ggattacaag
     1081 aaggcgccgg cactcccgag cagagccagg tccaaccccc gctaaggcag ctcgccaacg
     1141 atcttgcgga actccgtttc attgaacgcg cgcagcgtct ccgtgcgcac gttgcccatg
     1201 gcaccgagcg ccagtgctat cctcgccagc gcggtgtcat ccggcagctc ggcgatggcc
     1261 acggcgtcgt attgaccgat ggtgagatag aaggccttca actcaccacc cgcctttttg
     1321 tacgcctgct tggcggcgtc cagccgagtg gggccctgct tgatggctgc gatcccctgc
     1381 tgggtgtagc ggagaagcga gatgtaagtc ggcatcgttt gcctccgggg tgaatctccg
     1441 gctatggtgg gataggtccc tttaacctgt agcacgggct ggatgggcgc tagcagggag
     1501 gtgcccttcc ttcggggtgg cagaccggct cgccgttgtg ggcggcaagg atcttgccca
     1561 cctgaaattt cggccgatgg tgcatcggct cgatcccacc gtctaaaccc cagctcaacg
     1621 cacccttgcg gagttgcctg aatgcacacg tatcaccatc cgggcatggt cgtactttcg
     1681 attgtggtgg ccatcctcgc ctcctacaca gcgttggatc tggccggtcg ggtggccgcg
     1741 gcgcgcgggt gggcccggat cgcatggctg ggtagcgggg cgatagctct gggcacgggg
     1801 atctgggcca tgcacttcgt tgccatgctc gcgtttcacc ttcctgttcc gattgcctat
     1861 gatatccccc tggtggtcag ctccgcgctg gctgccttcg tcgcctcctt tctggcgctc
     1921 ttcatcgcga gtcgccgtac cctgacggca gggccgctct gtctggtggg cgtctgcatg
     1981 ggcgccggca tcagcgtgat gcactacacc ggcatggcgg caatccgaac ggcggccacc
     2041 cttcactatc acgccaatct agtcgcggct tccatcgcga tcgccatcat cgcctcgatg
     2101 gcggcgctct ggctggcctt ccgtctccga ggtgacgact cccgcagggg gcatctgctg
     2161 cgagctggag cctcgattgt gatgggcttc gcgatcaccg gcatgcacta cacggctatg
     2221 gcggccgctt acttcgccgc gctctcggag cctcacgtcc aagccgcagc cggcgtcctc
     2281 gcaaccaccg ggttgggcac tgccgtcgtt tgctccacat tcttggttct gttcctcgca
     2341 ctgctcagcg ccacgttcga ccgggctatc gaacgcaaaa acgtcgagct cgagcgactc
     2401 gcgtggatcg tggattcgtc ggacgatgcg attgtgagcc ggtcggtgga cggtacgatc
     2461 ctcacctgga atggtggcgc ggagcggctc tacggttact cggccaggga agcggtcggc
     2521 cagcgcttct cgcggttcgt tcacagcggt gagcaggagg tgaccctgat ccgtaaggat
     2581 ggaaccaggg tcgatgtatg gcagctggaa tcgccaatcc gtaaccggga tggggtgctc
     2641 acagggattt cctcgatcgg gcgcgacgtc acggtggcgc accgattgaa ggaagccgag
     2701 catgcggcac tccaggcagc cgagtccgcc agccgcgcaa agagcgactt cctcgccaac
     2761 atgagccatg agatccggac accgatgaat ggggtcatgg gttttgtgga cctggcgctc
     2821 gataccgagc tgacgccgga gcagcgggag tacctcgagg tagccaagcg ctcgtccgat
     2881 tcgctgctcg gcgtcatcaa cgacatcctc gacttctcca aagtcgaagc cggacaactc
     2941 gatctcgacc cgattccatt ccagctcggg gacgccttcg ccgatatgat gagctcgctg
     3001 gcgctcaggg cgagcaagaa gaacctggag ctcgcgctcg agatcgcgcc cgacgtgcct
     3061 gatggcctgg tgggcgatat cggacggttg cgccaggttg ttgtgaacct ggtgagtaac
     3121 gccatcaagt tcaccgagtc cggagaggtg attgtccggg taggccggga gttgaatgaa
     3181 gaggatgctg ttactctgca tgtgagcgtg gctgacaccg gcatcgggat tcccgaggac
     3241 aagcactcga cgatcttcaa cgcttttacg caggccgatt cgtcgacgac ccgccgatat
     3301 ggaggcaccg ggctggggct ggcaatctcc tctcggctgg tgcagctgat ggggggccgt
     3361 atctgggtag agagcgagtc gggtgtgggc agcacgttcc agttcacgac ccgactggag
     3421 cctcggcagc ccgggagcgt catcgaggct ctcccggcc
//
LOCUS       DASYRV010000575         1718 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3873861, whole genome shotgun sequence.
ACCESSION   DASYRV010000575 DASYRV010000000
VERSION     DASYRV010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3873861"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(39..566)
                     /locus_tag="VGQ24_15200"
     CDS             complement(39..566)
                     /locus_tag="VGQ24_15200"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEV8456244.1"
                     /translation="MTHLNEIDTFRAVWKSEAQSTIRIIEGLPTDQYDFRPDPKGRSI
                     GELAWHLSEIDACLSFGIAERRFRFEDEPPDLRRPREIKLLAPGYRRVHQQAVARLEN
                     LENSQLDDSVTFFDGRRLAIRDVLWSELLHHLIHHRGQLVLMSRMAGGRPPGLYGPNR
                     EEMQALHAKMEAAKV"
     gene            complement(669..1175)
                     /locus_tag="VGQ24_15205"
     CDS             complement(669..1175)
                     /locus_tag="VGQ24_15205"
                     /EC_number="3.1.1.106"
                     /inference="COORDINATES: protein motif:HMM:NF001664.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyl-ADP-ribose deacetylase"
                     /protein_id="HEV8456245.1"
                     /translation="MLLSARVIDITTLDVDVIVNAANEQLAPGGGVCGAIHRAAGPEL
                     ARACGLLGNCPTGEARLTPGFQLPAKFVIHAVGPVWRGGKAGEADLLASTYRAALRLA
                     TERALRSVAFPAISTGIYGYPLREATEVAIRTVRQVLEAGSSVDLVIFACFSPEVLQA
                     YREAGVTA"
     gene            complement(1296..>1718)
                     /locus_tag="VGQ24_15210"
     CDS             complement(1296..>1718)
                     /locus_tag="VGQ24_15210"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4440 domain-containing protein"
                     /protein_id="HEV8456246.1"
                     /translation="GCMPMNRARLFTAGLAIILSACRPAPEDRRASAAEAVRAADIAW
                     DKAFSRRDTSAAVAAVEPTGSVLAPNAPIATGPEAIRALFTGFYAMPGLSIHWQPTKV
                     EAARSGDLAYSTGTSELTFRDPKGEADPRSREVCHSVA"
BASE COUNT          310 a          548 c          553 g          307 t
ORIGIN      
        1 tgtgctgtag gtcgtgctcg ggaagcgctc actcggtcct agactttggc ggcctccatc
       61 ttggcgtgca gggcctgcat ctcctcccga ttgggaccgt agagacccgg cggcctcccg
      121 ccggccatcc gagacatcaa caccagttga ccgcgatggt ggatcaggtg atggagcagc
      181 tcgctccaga gcacgtcacg aatcgccagc cgccggccat caaagaacgt cacggaatca
      241 tcgagctgac tgttctcgag gttctcgagc cgcgccacag cctgctggtg tacgcggcga
      301 tatcctggag ccaggagctt gatctcgcgc ggccgtctga ggtcgggggg ttcgtcctcg
      361 aagcgaaacc tccgctcggc gattccgaag ctcaagcagg cgtcgatttc actcaggtgc
      421 catgccagct ctccgatcga gcgacctttc ggatcggggc ggaagtcgta ctgatcggtc
      481 gggagccctt cgataatgcg gatcgtgctt tgggcttcgg atttccagac ggcgcggaag
      541 gtatcaatct cgttgaggtg agtcatagga aatctccggg aagaagcgga tcatttccgg
      601 tcggctgtag aacgctacac gttgcctgga ggggggccag agcggaaccc gcgcaactca
      661 tgcgctcgtt aggccgtaac ccccgcctcg cgataggcct gcaagacttc tggggagaaa
      721 caggcgaaga tcacgagatc gacgcttgaa cccgcctcga gaacctgacg aaccgtccgt
      781 atcgccacct ccgtggcttc tcgcaggggg tagccgtaaa tgcccgtgct gatggctggg
      841 aaggccacgc tcctcaatgc acgctcggtg gcgagccgca gagccgctcg ataggtggag
      901 gccagcaggt cagcctcgcc agctttgcca ccgcgccaca ccggccccac ggcgtggatc
      961 acgaacttgg ccggcagttg gaagccaggc gtcaagcggg cctctccagt agggcagttc
     1021 ccgagcagac cacatgcccg agcgagctcc ggtcctgccg cccggtgaat cgcgccacac
     1081 actccgcccc ctggcgcgag ctgctcgttt gcggcgttca caatgacgtc gacatctaga
     1141 gttgtgatgt cgatgacgcg agcgctgagg agcatgagcc ctgaggtaga ggctggctgt
     1201 ccggccgcag cgcggtgacg tgcactcaac tcccgggaac cgccaaatcc gagttgaaga
     1261 cgtccaatgc gaccttccac gagccatcgg cctgcttatg ccacactgtg acatacttcc
     1321 cgtgatcgcg gatcggcttc cccctttgga tccctgaagg tgagctcaga ggtcccggtc
     1381 gagtaggcga gatccccgga tcgggccgct tccaccttgg tcggctgcca gtgtatgctc
     1441 agcccgggca tggcgtagaa cccggtgaag agggcacgaa tcgcctccgg tccggtcgcg
     1501 atgggcgcgt tgggggcgag caccgacccg gtcggctcga ccgccgccac cgcggcactg
     1561 gtatcccgtc gggagaaggc cttgtcccag gcaatgtcgg ccgcccggac tgcctcggcc
     1621 gcgctggcgc gccgatcttc gggggccggt cgacaggcac tcaggatgat cgcgagtcca
     1681 gccgtgaaga gacgtgctcg attcatgggc atgcaacc
//
LOCUS       DASYRV010000576         1689 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3268826, whole genome shotgun sequence.
ACCESSION   DASYRV010000576 DASYRV010000000
VERSION     DASYRV010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3268826"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..943
                     /locus_tag="VGQ24_15215"
     CDS             <1..943
                     /locus_tag="VGQ24_15215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456247.1"
                     /translation="QEGVDRSWKCFEVLLHRILDPGELYSHKVHIHSDLSSRRRRPTA
                     SRELRPFSWLFNSSYHASDARADRALVEQDHKKSPPMPMDDLALMELQVDTLYVHDED
                     GRLVATRESDPARAPRFFLGRTKAGNLWRFGAGLPSALARQLDALAASEPVPSDLRQE
                     PILLPRCRQVLGEHAEVRHSWIGPAYQFPDELPRPENTVAITRRNAGLLGEEFAWLRE
                     ELGTCSPAMAALAHGEVVSVCHSARLSSRAAEAGVETLAPFRGHGHASRAVAAWAIAI
                     REMGRVPLYSTSWDNAASQGVARRLALRLYGVDFSIT"
     gene            972..>1689
                     /locus_tag="VGQ24_15220"
     CDS             972..>1689
                     /locus_tag="VGQ24_15220"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEV8456248.1"
                     /translation="MVVEWNAHIFSPDLERYPFHPDAAYTPDLSGASRDPLAAYLERM
                     ATEGIDRAVLVHPEPYGDDHQLIRECLEREPDRLRGTCLFYPRDPMAPRKLSALVESQ
                     SQIVAVRFHAHRGKETYLDTFADTGVRALWEKALELGLIIELHIGPNYAASVAEALRA
                     YPASTVLIDHLAEPHMGSAVEYAQVLELAAFDRVIMKLSGLSHFAQDAPLYLSARPFT
                     RRVIQAFGPDRIVWGGGTPKI"
BASE COUNT          257 a          583 c          562 g          287 t
ORIGIN      
        1 ccaggaagga gtcgatcggt cgtggaagtg cttcgaggtg ctgctccacc gcatcctgga
       61 tcccggagag ctctactcgc acaaagtgca catccattcc gacctctctt cccggcgacg
      121 gcgcccgact gcgtcgcgtg agctcaggcc attctcctgg ctgttcaact catcttatca
      181 cgcgagcgat gcgcgagccg accgggccct ggtcgagcag gatcacaaga agagtccgcc
      241 gatgccgatg gatgatctgg ccctgatgga gcttcaggtc gacacgctct acgtgcacga
      301 cgaggacggt cgcctcgtcg cgactcgcga gtccgacccg gcgcgggcgc cgcggttctt
      361 cctggggcgc acgaaagcgg gaaacctctg gcggtttggc gcaggccttc ccagcgcgct
      421 tgctcgccaa ctggacgcgc tggccgcatc cgagccggtc ccatcggatc tccgtcagga
      481 accgatcctg ctcccgcgct gccggcaggt gctgggcgag cacgcggagg ttcggcattc
      541 gtggatcggc ccggcgtatc agttccccga cgagctgccg cgcccggaga acacggtggc
      601 catcacgcgg cgcaacgccg gcctcctcgg cgaggagttc gcctggctgc gggaggagct
      661 cggcacgtgc tcgccggcca tggctgccct cgcgcacggt gaggtggtct cggtctgcca
      721 cagtgcccga ctttcgtctc gggcggcgga agcgggcgtc gagaccctgg cgccgttccg
      781 aggccacggc cacgcgagcc gcgcggtagc ggcctgggcc atcgcgatcc gcgagatggg
      841 gcgcgtgccc ctctacagca cgtcgtggga caacgccgcc tcgcagggtg tggcccggag
      901 attggctctc cgcctctacg gtgtcgattt ctcgatcacc tgacccgacc ggttctctgg
      961 gaaacagcgc catggttgtc gagtggaacg cgcacatctt cagcccggat ctggagcgct
     1021 atccgttcca tccggacgcc gcttacacgc cggatctttc cggagcgtcc cgggacccgc
     1081 tggcggctta cctggaacgc atggccaccg aggggatcga ccgggcggtg ctggtccacc
     1141 cggagccgta tggggatgac catcagttga tccgggagtg tttggagcgg gagccggacc
     1201 ggctgcgcgg cacctgtctc ttctacccca gggacccgat ggccccgcgc aagctgtccg
     1261 cgctggtgga aagccagtcc cagatcgttg ccgtccggtt tcacgcccat cgtggcaaag
     1321 agacatacct ggacaccttt gcggacacgg gggtgcgcgc cctctgggag aaagcgctgg
     1381 aactggggct gatcatcgag ctccacatcg gcccgaacta cgcggcctcg gtcgccgaag
     1441 cgctgcgcgc ctaccccgcg tccacggtgc tgatcgacca cctggccgag ccccacatgg
     1501 gcagcgccgt cgagtatgcg caggtcctgg agttagcggc gttcgaccgg gtcatcatga
     1561 agctctccgg cctcagccac ttcgcccagg acgcgccgct ctacctgagc gcccgtccgt
     1621 tcacccgccg ggtcatccag gcgttcgggc cggatcgaat cgtctggggt ggcggcaccc
     1681 cgaagatcg
//
LOCUS       DASYRV010000577         2581 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3484887, whole genome shotgun sequence.
ACCESSION   DASYRV010000577 DASYRV010000000
VERSION     DASYRV010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2581
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3484887"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..329)
                     /locus_tag="VGQ24_15225"
     CDS             complement(<1..329)
                     /locus_tag="VGQ24_15225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pili twitching motility protein PilT"
                     /protein_id="HEV8456249.1"
                     /translation="MLDLKDLLQIVSDQGASDLHLIVGASPTIRVDGQLIRLDAPPLK
                     SSDTAAIALAITPPDRQHLLETQKEVDFAHSIPGGGRFRVNVFRQRGSMSVVMRRVRL
                     GGASFKEL"
     gene            470..997
                     /locus_tag="VGQ24_15230"
     CDS             470..997
                     /locus_tag="VGQ24_15230"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEV8456250.1"
                     /translation="MRTRMAKMPGMDLLVEFFRHNAMMNRRLVEACRQLRPEQLGATA
                     IGTYGNIGATLVHIANAQEGYAARLLDTQRPERLPEDPFPGFEALAERFAHGDAQLEE
                     APTQAGQDREVRVTGDDPPGTWLMPVSLFLLQAVNHGTEHRSQVATILTQLGVEPPEM
                     DGWTYFFDSGHMDPV"
     gene            1086..1583
                     /locus_tag="VGQ24_15235"
     CDS             1086..1583
                     /locus_tag="VGQ24_15235"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HEV8456251.1"
                     /translation="MVHPDEELHRFWNDQAREIDAFLYGRRLYELMSDFWPTADADPS
                     APDYVVEFARIWRDEPKVVFSTTLERVDWNSRLVRDNIAEEVTKLKAQPGKDMNVGGP
                     TLASTLMRLGLVDEFRPVVHPVVLGGGTPFFPALDNRIGLRLVETRTFGSGVVYLRYE
                     RVPIR"
     gene            1699..1902
                     /locus_tag="VGQ24_15240"
     CDS             1699..1902
                     /locus_tag="VGQ24_15240"
                     /inference="COORDINATES: protein motif:HMM:NF016840.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF664 domain-containing protein"
                     /protein_id="HEV8456252.1"
                     /translation="MVVRNLHSRPARPPPSWASWERLARRTWPDGRAPSLRWILCHMI
                     EEYARHNGHADLIRESVDGLTGE"
     gene            2014..>2581
                     /locus_tag="VGQ24_15245"
     CDS             2014..>2581
                     /locus_tag="VGQ24_15245"
                     /inference="COORDINATES: protein motif:HMM:NF017984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crosslink repair DNA glycosylase YcaQ family
                     protein"
                     /protein_id="HEV8456253.1"
                     /translation="MTERVLTLRELNRATLARQLLLQRKRLSPKAVIERLVGMQAQSP
                     QAPYVGIWTRTTNFRRETLERELARAAVVKATVMRQTLHLLTGRDYALLRAARSETNF
                     PEQSATARRLAPSVRALAAAGPVKTAEALAYLEREHGLTGVTARRAWRGARIRAHLVH
                     HYESALWHARPEGRFVAIDEPEPHDPTEA"
BASE COUNT          437 a          857 c          865 g          422 t
ORIGIN      
        1 agttccttga agctcgcccc tccgagtcgt acccgccgca tgacgacgct catcgagcct
       61 cgctgccgaa acacgttcac ccggaaccgg cctccgcccg ggatggaatg agcaaagtcc
      121 acttccttct gtgtctccag aagatgctgg cgatcgggcg gagtgatggc cagggcaatt
      181 gccgcggtgt cagaggactt gagcggagga gcgtccagac ggatcagctg tccatccacc
      241 cggattgtgg gagatgcccc gacaatcaag tgcaggtctg aggccccttg atcgctaact
      301 atctgaagta gatccttgag atccagcatc gtcctcactt aggtctgagc gcgggcttcc
      361 ggccctacct tgcttcggga atggccgaga gtcccttgac ccggactttc gtcgtaggga
      421 gacgtgaaga gtcaaactca cgcgccgtta cgaggaggtg gagcctgaca tgcggacacg
      481 gatggctaag atgccgggca tggacctcct cgtggagttc ttccggcaca acgccatgat
      541 gaatcggcgg ctggtggagg cttgccggca gctccggccc gagcagctcg gtgccacggc
      601 catcgggacc tacgggaaca tcggcgccac cctggtccac atcgcaaacg cccaggaggg
      661 gtacgccgcg cggctcctgg acacccagcg gcccgagcgg ctcccggagg acccgttccc
      721 cgggttcgag gccctggcag agaggttcgc tcacggcgac gcacagctcg aggaggcgcc
      781 gacgcaggcc gggcaggatc gcgaggtccg ggtgaccggt gacgacccgc cgggcacgtg
      841 gttgatgccc gtgtcgctgt tcctgctgca ggcggtcaac cacggcaccg agcaccgctc
      901 gcaggtggcc acgatcctga cccagctcgg ggtcgagccc cctgagatgg acggctggac
      961 ctacttcttc gacagcggcc acatggaccc ggtctagccc tccaggagaa cgggatgagg
     1021 aaggtcatct actcgatggg cgtgtcgctc gatgggttca tcgagggccc gaaccgcgag
     1081 ctcgactggt ccaccccgac gaggagctgc acaggttctg gaacgatcag gcgcgggaaa
     1141 tcgatgcctt tctatacggg cggcggctgt acgagctcat gtccgacttc tggccaacgg
     1201 cggatgcgga cccctcggcc ccagactacg tggtcgagtt cgccagaatc tggagggacg
     1261 agcccaaggt cgtgttctcc acgaccctgg agagggtcga ctggaatagc aggctggtca
     1321 gggacaacat cgccgaagag gtcacgaagc tgaaggcgca gcccggcaag gatatgaatg
     1381 tcggtgggcc caccctggcc tccaccttga tgcggctcgg cctggtcgac gaattccgcc
     1441 cagtcgttca tccggtcgtc ctgggcggcg gcacgccgtt cttccctgcg ctggacaaca
     1501 ggatcggttt gcggctcgtc gaaacccgca cgttcgggtc tggagtcgtt tacctgcgct
     1561 atgagcgcgt gccgattcgg taacggctag atcgctgcca cccacgctgg gtacgtcgcc
     1621 ttcagcgtcc agttccctgg cattgccact ggtcagttca gcgcctaggc tcaccgcccg
     1681 tgaccgatgt ggacgagcat ggtcgtccgg aacctccact cgcggccggc gagaccgcca
     1741 ccctcctggg cttcctggga gcggctggcc cggcgtacct ggcccgacgg tcgggcaccg
     1801 agcctgcgat ggatcctgtg ccacatgatc gaggagtacg cgcggcacaa cggccatgcc
     1861 gacctcattc gggagtcggt ggatgggctc acgggcgagt agccgccacg aggaaggcgc
     1921 gaggctcccg ctcctccgct ttgacgatct acctcccagg ttcccagctg atcgttcccg
     1981 atgtcgggac gagcgcatgt gtagcgtgag cgggtgaccg agcgcgttct cacgctgcgc
     2041 gaactgaacc gcgcaacgct ggcgcgtcag cttctgctgc agcgaaagcg gctctcgccg
     2101 aaggcggtga tcgagcgcct ggtcgggatg caggcgcaat cgccgcaggc gccctacgtc
     2161 ggcatctgga cgcgcacgac gaacttccgg cgcgagacac tcgagcgcga gctcgcgagg
     2221 gcggccgtgg tcaaggcgac cgtgatgcgg cagacgctgc acctgctgac tgggcgcgac
     2281 tacgcgctcc tccgcgctgc gcgttccgag acgaacttcc cggagcagtc ggccacggcg
     2341 cggcgcctgg ccccctcggt gcgcgcgctg gccgccgcag gtccggtgaa gacggcggag
     2401 gcgctcgcct acctggagcg cgagcacggg ctcaccggcg tcaccgcccg tagggcctgg
     2461 cgcggcgcgc ggatccgcgc acacctggtg caccactacg agtccgcgct ctggcacgct
     2521 cgtccggaag gccggttcgt ggcgatcgac gagcccgagc cccacgaccc cacggaggcc
     2581 c
//
LOCUS       DASYRV010000578         1681 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3875780, whole genome shotgun sequence.
ACCESSION   DASYRV010000578 DASYRV010000000
VERSION     DASYRV010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1681
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3875780"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..225)
                     /locus_tag="VGQ24_15250"
     CDS             complement(<1..225)
                     /locus_tag="VGQ24_15250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456254.1"
                     /translation="MSATTIRTVLLSNGLRPAPRRASVTWRAFLRAQASAIVATDFFT
                     VETVRLTTLYVLFSIELGTRQVRLIGVTDHP"
     gene            497..802
                     /locus_tag="VGQ24_15255"
     CDS             497..802
                     /locus_tag="VGQ24_15255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456255.1"
                     /translation="MGEDGNLDVLGVLATEASKQHADEPPSQEVEEGQRHRRIIASPS
                     PRCSPHDQVSEPYGAWQGLATTLVNLQLAEQGDPRSGARKLLGPALRDTGSGIEDVR"
     gene            1050..>1681
                     /locus_tag="VGQ24_15260"
     CDS             1050..>1681
                     /locus_tag="VGQ24_15260"
                     /inference="COORDINATES: protein motif:HMM:NF025774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MEDS domain-containing protein"
                     /protein_id="HEV8456256.1"
                     /translation="MINREPWDGVVADAAPCDHIVQLYQDQDFLNRAVCRFAHAGLAN
                     GEGVILVSTLPHWNGFGARLEAEGVDVEAAQERGQLTVVDADELLPRFMRDAMPDPPV
                     FRRVFGDVLGQARAKGSHQEVRVWGEMVNVLWERGDVAASMNLEDQFDQLGKKSDIAI
                     FCSFLMDNFNGDVHERMLPRLGTNHSHLIPVEDYARLERAVDDALRETVGP"
BASE COUNT          312 a          536 c          562 g          271 t
ORIGIN      
        1 cggatgatcg gtgaccccga tgagacgaac ctgccgcgtc ccaagttcga tgctgaacag
       61 gacatacagc gtcgtgaggc gcaccgtctc cacggtgaag aagtcggtgg ccacgatggc
      121 cgaggcctgc gcccgaagga acgcccgcca ggtgaccgac gcccgtcggg gcgcgggccg
      181 aagcccgttg cttagcagca ccgtgcggat ggtggtggcc gacaccgaga ctcccagctt
      241 cttgagctcg ccctggatgc gccggtagcc ccagcggggg ttctctcagg ccagccgcag
      301 gatcagcact accacttgtt cggccaacgg cggccggcca catcagtcgc cggtgccacc
      361 gcaggatcgt gcctggcgtc acgaggaagg ctgaccagcg tgcgcgggga agcgcgcggc
      421 tcagcaccgc cagggccgca cgatcggcag ggcggaactc agggcgtttg acctggcggc
      481 gcaacacctc gagttggtgg gggaggacgg caatctcgac gtccttggcg tgctcgctac
      541 ggaggcctcc aagcagcatg ccgacgagcc gccgagccag gaggtagagg aaggacagcg
      601 ccatcggcgg attatcgcct cgcccagtcc tcgctgctca ccgcacgacc aggtttctga
      661 accctacggt gcctggcagg ggctggccac caccctcgtc aacctccaac tcgccgagca
      721 gggggatcca cgctccggcg cgcgaaagct gctcggcccg gctctccgcg ataccgggag
      781 cgggatcgag gacgtgcgct agatcgccgt gggaatccat agctcaggca ccggaagcgc
      841 ctcggctaca cgccgtcggt tccgccggag cccagaccca acaccaaagt gcaatggacc
      901 tttggcctag ggcggcgtac cgtcatccta ggagaggacc cacgtgaagg cggaaaccgg
      961 tttagcctgt tatccggcag ctgctcctca tgtaactcac gggcaccggc ttcgacggaa
     1021 tgttgaggcc gtccggaccg gaggcaccga tgataaaccg tgagccctgg gatggagtgg
     1081 tggcggacgc cgccccatgc gatcacattg tgcagctcta ccaggaccag gattttctta
     1141 accgcgccgt ctgccggttc gcccatgctg gtctcgcgaa cggagagggc gtcatcctgg
     1201 tgtcgacgct cccccactgg aacggctttg gcgcacggct cgaggccgag ggcgtggacg
     1261 tggaagcggc acaggaacgt ggacagctga cggtggttga cgccgacgaa ctcctgcccc
     1321 gctttatgcg ggacgccatg ccggatccgc ctgtattccg ccgcgtcttc ggggacgtcc
     1381 ttggacaggc tcgcgctaaa gggagccacc aagaagtgcg tgtgtgggga gaaatggtca
     1441 atgtcctgtg ggagcgcggg gacgtggccg ccagcatgaa cctcgaggac caattcgatc
     1501 agcttggcaa gaaaagtgac atcgcgatct tctgctcgtt cctgatggac aacttcaacg
     1561 gcgatgttca cgagcgcatg ctgcctaggc tcgggacgaa tcactctcac cttattccag
     1621 tggaggacta tgctcggctg gagcgcgccg tagacgatgc gctccgggag acggtcggcc
     1681 c
//
LOCUS       DASYRV010000579         5423 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3272241, whole genome shotgun sequence.
ACCESSION   DASYRV010000579 DASYRV010000000
VERSION     DASYRV010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5423
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3272241"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..310)
                     /locus_tag="VGQ24_15265"
     CDS             complement(<1..310)
                     /locus_tag="VGQ24_15265"
                     /inference="COORDINATES: protein motif:HMM:NF013255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEV8456257.1"
                     /translation="MRLLVTGGTGFIGSHLAEEGRRRGAEVVVLGLTGRPEEQANAAL
                     LSRMGAEVLSGSITDAELCRRAARGATHIFHLAVAMREGGKGDAFFESINLDGTRQLL
                     E"
     gene            complement(307..1419)
                     /gene="wecB"
                     /locus_tag="VGQ24_15270"
     CDS             complement(307..1419)
                     /gene="wecB"
                     /locus_tag="VGQ24_15270"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016634935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HEV8456258.1"
                     /translation="MIRVLSVFGTRPEAIKMAPVVHALQRAPTRFESVICVSAQHRAM
                     LDQVLDVFDLRADHDLDLMTAGQAPAEVVARVLERLPPLLRQIRPDVLLIQGDTMTSF
                     AAAFAAYLERIPSGHVEAGLRTGDRYQPFPEEMNRVLTTRLASIHFAPTAQARTTLLK
                     EGVPQADIHLTGNTVIDALLQTVRPDYCFRSPQLASLDPARRLLLVTTHRRESFGAPL
                     RSTCAAIRELAGRFPDLQFVLPVHPNPEVKETVERLLCDLPGMILIAPVDYVEFVHLM
                     NRAYLILTDSGGVQEEAPSLGKPVLVLREVTERPEGVAAGTAVVVGTDQARIVSVASE
                     LLTSRDAYERMANAVNPYGDGQASGRIVKALEERFG"
     gene            complement(1416..2273)
                     /locus_tag="VGQ24_15275"
     CDS             complement(1416..2273)
                     /locus_tag="VGQ24_15275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456259.1"
                     /translation="MTDRLFAFRWDVDHRVCATDGLPRIRSVCRDFGVPNTFFVNMGR
                     STNLLEWIGSGMARSKAKLADREAVHLIKKAGWPRFLIETALARPVGLSFVPLFQELQ
                     AEGHELGLHGGMDHVVWSRRFHELPNHVLQADVEESYGHFVRHFGKPAGFSSPGFYSD
                     DRVMVLLDRLGFLYNGDAIGGEPRRATVAGRAVGHWTIPVTLAGPRTIPFLEYHGARG
                     TPAPEVFRQLNQHLDEHDTVVLYGHPCYEGVRDNVLRQVFATVVERGFRFVTMQTMAE
                     QLRTVALER"
     gene            complement(2270..3616)
                     /locus_tag="VGQ24_15280"
     CDS             complement(2270..3616)
                     /locus_tag="VGQ24_15280"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8456260.1"
                     /translation="MTVPLAFTPVAFTESQHVMTAGGLVVAGPEAPPLPSGGRGAPLR
                     IVCPTYWYPQHATDTQATYVHDINRHLVRRGHTVTVVTPGDPSLPRRDTFDGVQIVRF
                     PLQLPADLTYGRVAQSQVSWLGKFARLAVMARYLEAQHRAIMTEVREKGADVIHAHWA
                     IPTGPAAVMAARKLRVPSVITMHGGDVYVNPEQGYDFPTRWYVRPALRWTLRHAGALT
                     AITEDCRQHALRAGAPADHIRLVFNGTDLRRFSPGENGNRNYQRFGPHMIFACRQLFP
                     RKGIRFLLEAGAQLKPQFPDLKIMVAGDGFEREALAHLAEELGIGEDVTFLGWVPNTE
                     LPPYYRAAAVSVIPSLEEGFGIPAAEAMGCEVAVVASDAGGLPEVVENGVTGLVVPRG
                     DSAALAQAIGSLLADPQRRSQMGQAGRARALRLFDWDRSAEQFEELYREVAARMAR"
     gene            complement(3768..4187)
                     /locus_tag="VGQ24_15285"
     CDS             complement(3768..4187)
                     /locus_tag="VGQ24_15285"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8456261.1"
                     /translation="MPLSQGPTNTNPGSKRPPGGYTVLVVDDEEAVRRLACRMLTWTG
                     YQALEATHGREAIATIEQHAGGVHLVLTDIKMPGMSGRELGRQVEQRWPGKPILYMSG
                     FASEVFENGLLEPGAPFLPKPFTQEDLAQKVRGLLGS"
     gene            4441..5226
                     /locus_tag="VGQ24_15290"
     CDS             4441..5226
                     /locus_tag="VGQ24_15290"
                     /inference="COORDINATES: protein motif:HMM:NF025774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MEDS domain-containing protein"
                     /protein_id="HEV8456262.1"
                     /translation="MTQPAEFLDQPKPEEHFVQLYGKDDRLLTRNVSRYLGEGLRRGD
                     GLLVIATAEHRGSLVRRLAEERTYTRAVLEGRLVFLDAETTLNRFMVDGEPDQARFER
                     IIGEALAGVRARAVQSGIRAYGEMVGVLWKAGQFLAAVRLEELWNELLSSSDVSLFCA
                     YPIDVFGPEFQAASVDALLCAHTHVVPTDCALEGALNRAMDEVLGARVDGLRRLIQAN
                     HRPAWALIPKPEAIILWLRNNLPGSVDQILDRAEEYYQLAKSA"
BASE COUNT          959 a         1754 c         1800 g          910 t
ORIGIN      
        1 cctcgaggag ctggcgggtg ccatcgaggt tgattgactc gaagaacgca tcgcccttgc
       61 cgccttcgcg catcgccacg gcgagatgga agatgtgggt ggcaccgcga gccgcgcgac
      121 ggcagagctc ggcgtcggtg atgctgcccg agagtacctc cgcacccatc cggctcagca
      181 acgcggcgtt cgcctgctcc tccgggcggc cggtgagccc gagcacgacg acttcggccc
      241 cccggcggcg gccctcctcg gccagatgtg agccgatgaa gccggtcccc cccgtcacca
      301 gcagcctcac ccgaagcgct cctcgagcgc cttgacgatg cggccgctcg cctgtccatc
      361 gccatacggg tttaccgcgt tggccatccg ctcgtaggcg tcacgcgagg tcagcagctc
      421 gctggcgacg ctgacgatcc gcgcctgatc ggttccgacc acgaccgccg tgccggccgc
      481 gactccttcc ggacgctcgg tgacctcccg gagaaccagg acgggcttgc ccaacgaggg
      541 tgcctcctcc tgtacaccgc cgctgtcagt gagtatcagg taggcacgat tcatcaggtg
      601 tacaaactcg acgtagtcca ccggggcgat cagaatcatc ccgggaagat cgcagaggag
      661 ccgttcgacc gtttccttga cctcggggtt gggatggacc ggcaaaacga actggagatc
      721 gggaaagcgc ccggccagct cccgaatggc ggcgcaggtc gagcgtagcg gcgcaccgaa
      781 gctctcccgc cggtgggtag tcaccagcag gaggcgccgc gcgggatcca ggctggcgag
      841 ctggggcgag cggaagcagt agtccggccg cacggtctgg agcagcgcat cgatgaccgt
      901 gttgccggtg aggtgaatat ccgcctgggg gacgccttcc ttcagcagtg tcgtcctggc
      961 ctgtgcggtg ggcgcgaagt gaatcgaggc gagccgggtg gtcaacaccc ggttcatctc
     1021 ctccggaaac ggctgatacc gatccccggt gcgcagcccc gcttcgacat gcccggatgg
     1081 aatccgctcg aggtacgccg cgaaggcagc ggcgaagctc gtcatcgtgt cgccctgtat
     1141 caggagcacg tcaggccgga tttggcgcaa cagcggcggg agtcgctcga gaacacgggc
     1201 cacgacctcg gccggcgcct ggcccgcggt catgaggtcg agatcgtgat cggcccggag
     1261 atcaaagacg tcgagaacct ggtccagcat ggcccggtgc tgggccgaca cgcagatgac
     1321 gctttcgaag cgggtcggcg cgcgctggag tgcgtggacc accggcgcca ttttgatcgc
     1381 ctccggacga gtcccgaaga cgctgagaac ccggatcatc gctcgagcgc gaccgtccgc
     1441 agctgctcgg ccatcgtctg cattgtcacg aagcgaaagc cccgctcaac aaccgtcgcg
     1501 aagacctggc gcagcacgtt gtcacgcacg ccttcgtagc acgggtggcc atacagcacg
     1561 acggtgtcgt gctcatcgag atgctggttc aactggcgga atacctcagg cgcgggcgtg
     1621 ccgcgggcgc cgtggtactc gaggaagggg attgtccgcg ggcccgcgag cgtcaccggg
     1681 atggtccaat gcccgaccgc ccggccggcc acggtggctc gccggggctc accaccaatc
     1741 gcatccccgt tgtagaggaa accgagccgg tcgagcagca ccatgacccg gtcgtccgag
     1801 tagaagcccg gagaggagaa ccccgcaggc ttgccgaagt ggcgcacaaa atgaccgtac
     1861 gactcctcga cgtcagcctg gagaacgtgg ttggggagct cgtgaaaacg gcggctccag
     1921 acgacgtggt ccatgccgcc atggagcccg agctcatgcc cttcggcttg caactcctgg
     1981 aacaaaggca cgaaggagag gccgaccgga cgggccagcg ccgtctcaat caggaaacgg
     2041 ggccagccgg ccttcttgat gaggtgcacc gcctcgcggt cggccagctt ggccttggag
     2101 cgggccatgc cgctgccgat ccactcgagc aggttggtgg agcggcccat gttcacgaag
     2161 aacgtattgg gcacgccgaa gtcccggcat accgaccgga tccggggcag tccgtcggtg
     2221 gcgcagaccc ggtgatcgac gtcccagcga aaggcgaaca gccggtcggt caccgtgcca
     2281 tccgggcagc gacttcacgg tacagctctt cgaactgctc ggccgagcgg tcccagtcga
     2341 acagacgcag ggcgcgagcc cggccggcct gtcccatctg gcttcggcgc tgcgggtcgg
     2401 ccagcagcga cccgattgcc tgggcaagcg cggctgaatc gccccgcggg accaccaggc
     2461 cggtgactcc attctctacc acctcgggaa gccctccggc atcgctcgcg acgacggcca
     2521 cctcgcagcc catcgcttca gcagctggga tgccgaagcc ttcttccagc gagggaatca
     2581 ccgacacggc cgcggcgcga tagtagggcg gcagctccgt gttcggcacc cagccaagga
     2641 aggtgacgtc ttccccgatg ccgagctcct cggccaggtg ggcgagcgcc tcccgctcga
     2701 agccgtcacc cgcgaccatg atcttgagat cgggaaactg cggcttcagt tgagcaccag
     2761 cctccagcag gaatcggatg cccttgcggg ggaacagctg ccggcaggcg aagatcatgt
     2821 gcgggccgaa ccgttgatag tttcggttgc cgttctcacc gggactgaat cgccggaggt
     2881 cggtgccgtt gaacaccagc cggatgtgat cggccggcgc gccggcccgc aaggcgtgtt
     2941 gccggcagtc ttcagtgatg gcggtaagcg ctccggcgtg ccgcagggtc cagcgcaggg
     3001 ccggccgcac ataccagcga gtcgggaaat cgtacccctg ctccgggttc acgtagacgt
     3061 cgccaccgtg catcgtgatc acgctgggca cccgaagctt gcgtgcggcc atcaccgcgg
     3121 ccgggccggt ggggatcgcc cagtgcgcgt gaatgacgtc ggcacctttt tcccgcacct
     3181 cggtcatgat ggcgcgatgc tgcgcttcca gataacgggc catcaccgcc aagcgcgcga
     3241 atttgcccag ccagctcacc tggctttggg ccacgcgtcc ataggtcaga tcggctggga
     3301 gctggagagg aaagcggacg atctgaacac cgtcgaacgt gtcacgccgg ggcagcgacg
     3361 ggtcgcccgg ggtgaccacc gtcaccgtgt ggccgcggcg taccagatga cggttgatgt
     3421 cgtggacgta ggtggcctgc gtgtcagtag cgtgctgcgg ataccagtag gtgggacaaa
     3481 cgatgcgcaa cggagctccc cggcccccgg atggaagagg gggcgcctcg ggtcctgcca
     3541 ccaccagtcc ccctgctgtc ataacgtgct ggctctcggt gaaggctact ggggtaaagg
     3601 ctagaggaac ggtcatcaaa gatcaacatt tgtgccactt tagcccctct ccgtcgcgga
     3661 ttttagctcc gcaaattcgg cttttgcctc gcctttgcca cagaatatgc tgcctccgcg
     3721 ccgcggaccg gtcgcaaggt tcgctgaggg agctggaaac ggctgctcta gctgccaagc
     3781 agaccccgca ccttctgggc gagatcctcc tgggtgaagg gtttgggcag gaacggtgcg
     3841 ccaggctcga gcaagccgtt ctcgaacacc tccgacgcga acccggacat gtaaaggatc
     3901 ggctttccgg gccagcgttg ctcgacctgc cggccaagct cccggccact catcccgggc
     3961 atcttgatgt cggtgaggac gagatgaacg ccgcccgcgt gttgctcgat ggtggctatc
     4021 gcttcccggc cgtgagtcgc ttcgagcgcc tgatagccgg tccaggtcag catgcggcag
     4081 gccaaacgcc tgacagcctc ttcatcgtct actaccagga ccgtgtagcc gccgggcggc
     4141 cgcttggacc ccgggttcgt gttggtcggg ccctgcgata gaggcattgt cgatgcaagg
     4201 tcggagggtc tatctgcagt gcgaaggtac ccccgggccg cgcgaggccg caagctccaa
     4261 cgtggggata cgcaccgacc ggtgacttgc gacacaacct cccatccagc cgacgccata
     4321 ttatcatctt ctagccatcg agccgtcggg gcctgagccc gtggacatga gtctgacacc
     4381 ggggcaaggg cccctaggtt tgatgaccgg aatcgcccga agtcctatct ggggaacgtc
     4441 atgacgcaac ctgccgaatt tctcgaccag cctaagccgg aagagcactt cgttcagctc
     4501 tacggcaagg atgatcggct cctcacccga aacgtgagcc gctatctcgg cgagggcctg
     4561 agacggggtg atggtttgct cgtcatcgcc accgcggaac accggggctc cttggtgcgg
     4621 cggctggctg aagagcgcac ctacaccagg gcagtactcg agggccggct ggtcttcctc
     4681 gatgccgaga cgacgctgaa ccggttcatg gttgatggag aaccggacca ggcacggttt
     4741 gagcgcatca tcggtgaagc tcttgccggc gtccgggcgc gggcggtcca aagcggaatt
     4801 cgggcatacg gtgagatggt gggcgtgctc tggaaggccg gccagttctt ggccgcggtg
     4861 cgtctggaag agctctggaa cgagctgctg tcttcgagcg acgtcagcct gttctgcgcg
     4921 tacccgatcg acgtcttcgg ccccgagttc caagcggcat cggttgatgc attgctctgt
     4981 gcccacaccc atgtggtacc gaccgactgc gcgctcgagg gagcactgaa ccgggcgatg
     5041 gacgaagtgc tcggtgcccg ggttgacggc ctcaggcgtc tgatccaggc caaccatcgc
     5101 ccggcttggg ccctgatccc gaagcccgaa gccatcattc tctggctgcg caacaatctc
     5161 ccgggctcgg tggatcagat tctcgaccgg gcagaagagt attatcagct cgccaagtca
     5221 gcgtaatccc tagccggtag cggtggtcgg cgctggatct tctgtagggt tcgacagagg
     5281 ggagtgcgaa ccagccgggc tagcgtaggg gactcggatc acgatctcag agccctgacc
     5341 ccatgcactt gcctatcccc tgccgaatgg cgaatttccc cggcgcttgg agtggtggcc
     5401 gagtggctga aggcaccggt ttg
//
LOCUS       DASYRV010000580         1516 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3044485, whole genome shotgun sequence.
ACCESSION   DASYRV010000580 DASYRV010000000
VERSION     DASYRV010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1516)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1516)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1516
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3044485"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(373..>1516)
                     /gene="ychF"
                     /locus_tag="VGQ24_15295"
     CDS             complement(373..>1516)
                     /gene="ychF"
                     /locus_tag="VGQ24_15295"
                     /inference="COORDINATES: protein motif:HMM:TIGR00092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEV8456263.1"
                     /translation="PSCPSCLRGEEAEIYVLRLGIVGLPNVGKSTLFNALTSAKALVA
                     NYPFATIEPNTGIVQVPDPRLEALAQIVKPERTVPAVVEFLDIAGLVKGASEGEGLGN
                     QFLANIREVDAVVHVVRCFEDPDVQHVMGDVDPVRDREVVKIELGLADLASVEKRLDK
                     TSRAAKSGDPQSRLEQRLLEALQQTLAAGQPARLVVPTAEEAAAFRSFNLLTAKPVLY
                     AANVAESEIRAGNRFVDALRAALTRDGETAEVVTFSAKVEAELAELAPEDRSEFLESL
                     GLTESGLDRLAHAAYHLLGLQSYFTAGEKEVRAWTVHRGEKAPAAAGVIHSDFEKGFI
                     RAETVAYGDFVRAGGWKPAREQGLSRAEGKEYVVQDGDVMLFRFSS"
BASE COUNT          251 a          512 c          493 g          260 t
ORIGIN      
        1 tgatggcggc ctcttcgagc gcactgtcga agatatagac cacctcgtac tgacgggtca
       61 tgacaccttc ctttggacga gggccggcag caatccgccg gctcggttgc cccgggcctg
      121 gtgcaggcgc cggggaggag atatgtgggg cggaagataa gtggcagcgg ggcagcgggg
      181 caggggggcg gtaggcagcg cggcagcaga caggtgtcac cctgagccga aggcgagggg
      241 gccaaagctc cattcacgca acgatccact catgtgctgg atgccacccg gagttctggc
      301 cccttcgctg cgctcagggt gacatgcttc tgcttgcccg ctgccccgcc gccccgctgc
      361 cccgctgtgt actcagctgc tgaaccggaa tagcatgacg tcaccgtcct ggaccacgta
      421 ttccttgccc tcggcccggg agagcccctg ctcccgcgct ggtttccaac cgccggctcg
      481 aacgaagtcg ccgtaggcga ccgtttccgc ccggatgaac cccttctcga aatccgaatg
      541 gatcacgccc gcggctgccg gcgccttttc gcctcggtgg acggtccatg cgcgcacctc
      601 cttctcgccg gccgtgaagt agctctgcag accgaggagg tgataggcgg cgtgcgccag
      661 ccggtccagc ccggactcgg tgagacccag ggactcgaga aactcgctcc ggtcctcggg
      721 cgccagctcg gcgagctccg cctcgacctt cgcggagaag gtgaccactt cggcggtctc
      781 cccatctcga gtgagtgctg cgcggagcgc gtccacgaac cggttacccg cgcggatctc
      841 gctctcagcg acattggccg catagagaac cggcttggcg gtgagcaggt tgaacgaccg
      901 gaacgcggcc gcctcctcgg cggtgggcac gaccagccgg gcgggctggc cggccgccag
      961 cgtctgctgg agcgcttcca gcagccgctg ctccagtctg gactgaggat cccccgactt
     1021 ggcggcgcgg ctggtcttgt ccagccgctt ttcgacgctc gccaggtcgg ccaggcccag
     1081 ctcgattttg acgacctccc gatcacggac aggatccacg tcgcccatga cgtgctggac
     1141 gtcgggatcc tcgaagcacc ggaccacgtg gacgacggcg tcgacctccc ggatattggc
     1201 caggaactgg ttgcccagcc cttcgccctc actggcaccc ttcaccaggc cggcgatgtc
     1261 caggaactcg accaccgctg ggacggtacg ctccggcttg acgatttggg ccaaagcctc
     1321 gagccgcgga tcggggactt ggacgatccc ggtgttgggc tcgatcgtgg cgaagggata
     1381 attcgccacc agcgccttgg cggacgtcag cgcgttgaaa agggtcgact tcccgacatt
     1441 tggaaggccc acgatgccca gtcttagcac gtagatctct gcttcttcac cacgaaggca
     1501 cgaaggacac gaaggt
//
LOCUS       DASYRV010000581         6717 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3486655, whole genome shotgun sequence.
ACCESSION   DASYRV010000581 DASYRV010000000
VERSION     DASYRV010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6717
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3486655"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1412
                     /locus_tag="VGQ24_15300"
     CDS             <1..1412
                     /locus_tag="VGQ24_15300"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: protein motif:HMM:NF002086.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEV8456264.1"
                     /translation="AASEDDFRSVREVAAEIRRPVIAALARCHERDIDLAGEALSGAE
                     RGRIHVFVSTSDLHIREKLRTTRPAVLEMTRTAVRRAKQYTDDVEFSAEDASRTNPDY
                     LCQVIEAALQEGATTINLPDTVGYATPAEYAEMFRSVRERVPGVDRVVLSAHCHDDLG
                     LAVANTLAAIAAGATQVECTVNGIGERAGNAALEEIVMASRVRGPALAFTCKVESREI
                     HRTSQLLSHLTGVFPQPNKAIVGRNAFAHEAGIHQHGMLQNGLTYEIIQPEMVGIPRS
                     TLVLGKHSGRHALERRYLELGYQLGENELAEVYQGFTALADRKREILDEDLLALLHES
                     FHDAPEEFQMTHLRVVCGSVTATAEVRMTGPWSGERSARGSGDGPIAAAFTAVSEILG
                     RHVEVLSLTLRSVTPGRDSVGQVFLQAKIDGKSLSGHSASTDIVEASTRALVHALNKA
                     RHAEKLEASSLNSVYLWGV"
     gene            1546..3249
                     /gene="ilvB"
                     /locus_tag="VGQ24_15305"
     CDS             1546..3249
                     /gene="ilvB"
                     /locus_tag="VGQ24_15305"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005948 - acetolactate synthase complex
                     [Evidence IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HEV8456265.1"
                     /translation="MTETLTGSQILCRALLDQGIDVLFGYPGGAIMPFYHALPEYPGL
                     RHVLVRHEQAAAHAADGYARASGRAGVCVATSGPGATNLVTGLATAHMDNSPVVAITG
                     QVPRAMMGRDAFQETDIIGITQPITKHNRLVEDIEELEEAVAEAFYVAQEGRPGPVLI
                     DIPKDVQNQKTEWTGGQAVRRSGGNRDSTARPPDRPSGIAEAANLIAEAQRPLIMAGH
                     GVLLSDAYAELRALAERTGIPVITTLLGISGFPESHPLHLGMPGMHGEVHVNRAIQQA
                     DLIIGLGLRFDDRVTGNLAGFARGAKVIHVDLDRSEIGKNVPVAIGIVGDVREVLCSL
                     LDTVAPRHCDAWREEIAGFVRPRQENFRGGLTPETILDAIDSATSGRCSIVSDVGQHQ
                     MWVAKLFRYQRPNSHITSGGLGTMGFAVPAAMGVALARPDEPVWAISGDGGFQMNMQE
                     IATMVQEGIPVKMAIFNNGYLGMVRQWQQFFHGRRYSATPIWSPDYVRLAQAYGIAGW
                     RVESADQAASVVREATAEPGPALVEFVIEQEANVYPMIPPGGSLSEPIESEPAPPLVP
                     A"
     gene            3246..3752
                     /gene="ilvN"
                     /locus_tag="VGQ24_15310"
     CDS             3246..3752
                     /gene="ilvN"
                     /locus_tag="VGQ24_15310"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: protein motif:HMM:NF008864.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEV8456266.1"
                     /translation="MTVARAVSVLLEDRWITLNRAVGLIRRRNLPVRSLAVGPTDTPG
                     LSRLTIMLHSDTATADRAVQHLQKVVGVRAAMAFPAQEGVVRELALVKVRAPHERYGE
                     LLDVVQLYNASVVDDSADAMIVELSGSEAFVLSCIRALERFGVVEVARSGTIALGSGN
                     DIQSGTLP"
     gene            3749..4885
                     /gene="ilvC"
                     /locus_tag="VGQ24_15315"
     CDS             3749..4885
                     /gene="ilvC"
                     /locus_tag="VGQ24_15315"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: protein motif:HMM:NF004017.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEV8456267.1"
                     /translation="MTAPVRVYYDADADRSRLKGRTFAIIGYGSQGHAHALNLRESGA
                     DVVVGLRQGGGSWERARAAGLDARTVSEAADAADVIMMLVPDQDARAIYEGGVEQGLR
                     PGKTLMFAHGFNVHYGEIVPPDGVDVSMVAPKSPGHLVRSEFEAGRGVPGLVAVHQDA
                     SGEALANALAYAAGIGCTRAGVIETSFREETETDLFGEQAVLCGGVTALVKAGFETLT
                     AAGYRPEMAYFECLHELKLIVDLMYRGGLQFMRHSISDTAEYGDYTRGPRVITAQTRA
                     DMRRILDAIQDGSFAREWLAENRAGRANFERLRKADHDHEIERVGAELRAMMPWSEEG
                     KVSGAARQRGSAKTEKTEKHAPSGNEGTEKKPRGPRRPAHPLPR"
     gene            4949..6412
                     /gene="leuC"
                     /locus_tag="VGQ24_15320"
     CDS             4949..6412
                     /gene="leuC"
                     /locus_tag="VGQ24_15320"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: protein motif:HMM:NF009116.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEV8456268.1"
                     /translation="MKPRTLFEKVWDAHVVSQLPNGPALLYVDLHLVHEVTSPQAFEG
                     LRLAGRRVRRPDLTVATVDHNVSTGDRRLPIADEVSARQLDALVRNAREFGIELFDLD
                     SPEQGIVHVIGPELGLTQPGMTIVCGDSHTSTHGAFGTLAFGIGTSEVEHVLATQCVM
                     QSRPKTLEVQFTGRAQPGISAKDLILALIRRIGISGGAGHVIEYTGEAVRALSMEGRM
                     TVCNMSIEAGARAGMVAPDDTTVAYLAGRSRAPKGREWNRAVSGWSDLRSDPGARYDR
                     RVVLDASAIEPQVTWGTNPAMTATISERVPDPSLAASPAERESYQRALDYMGLRPGLP
                     LEGLPVDRVFLGSCTNARLEDLREAASVALGHRVARGVRAMVVPGSQRVKAAAEQEGL
                     DRIFTDAGFEWRNPGCSMCLGMNEDVLGPGERCASTSNRNFEGRQGRGGRTHLVSPAM
                     AAAAAIAGCLTDVRALMQRDRQSDAADERSYAASHEA"
     gene            6515..>6717
                     /locus_tag="VGQ24_15325"
     CDS             6515..>6717
                     /locus_tag="VGQ24_15325"
                     /inference="COORDINATES: protein motif:HMM:NF012897.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456269.1"
                     /translation="MQPFISHRGRVAGLRRANVDTDQIIPKQFLKRIERSGFGPFLFH
                     DWRYLPDGHENPDFELNRSEARGA"
BASE COUNT         1157 a         2152 c         2272 g         1136 t
ORIGIN      
        1 cggcagcctc cgaggatgac ttccgcagcg tacgcgaggt cgcagccgag atccggcgtc
       61 ccgtgatcgc ggcactcgcc cgctgccacg agcgcgatat cgatctggcc ggcgaggccc
      121 tgagcggtgc ggagcgcggc cgtatccacg tgttcgtctc cacatccgac ctgcacatcc
      181 gcgagaagct gcgcaccacc cggccggcgg tcctcgagat gacccgcact gccgtccgcc
      241 gggccaagca gtatacggat gacgtggagt tctccgcgga ggacgccagc cgaaccaacc
      301 cggactacct ctgccaggtg atcgaggccg cactccagga gggcgccacc acgatcaact
      361 tgcccgacac ggtggggtac gccacccccg ccgagtacgc cgagatgttc cggagtgtac
      421 gcgagcgtgt gcccggggtg gatcgagtcg ttctgagcgc ccactgccac gatgatctcg
      481 gtcttgctgt ggcgaacacg ctggcggcca tcgcggccgg ggccacccaa gtggagtgta
      541 cggtcaacgg catcggagag cgcgccggca acgccgcgtt ggaggagatc gtgatggcga
      601 gccgggtcag gggtccggcg ctcgcattca cttgcaaggt ggagtcgcgc gagatccatc
      661 gcaccagcca actgctctct catctcaccg gtgtgttccc tcagccgaac aaggccatcg
      721 tgggccgcaa cgcctttgcc cacgaagccg gaatccatca gcacggcatg ctccagaacg
      781 gcctcaccta cgagatcatc cagccggaga tggtggggat tccgcgctcg accctcgtcc
      841 tcggcaagca ttccggccgg catgctctcg agcggcggta cctcgagctg ggatatcagc
      901 tgggcgagaa cgagctggcc gaggtgtacc aggggttcac cgccctggca gaccggaagc
      961 gcgaaatcct ggacgaggat ctgctggccc tcctgcacga gagcttccac gatgcgccgg
     1021 aggagttcca gatgactcac ctccgcgtgg tctgcggcag cgtgacggcc acagccgagg
     1081 ttcgcatgac cggtccgtgg tccggtgagc gctctgcccg cggcagcgga gacggtccga
     1141 tcgccgccgc gttcaccgcc gtgagcgaga tccttggccg tcatgtggaa gtcctgagtc
     1201 tcaccctgcg atcggtcacg ccgggacggg acagtgtcgg ccaggtcttt ctgcaggcca
     1261 agatcgatgg gaagtcgctc tcggggcaca gcgcttctac tgacattgtg gaggcgagta
     1321 cccgcgcgct ggtacacgcc ctcaacaagg cgcgccatgc ggagaagctg gaggcgagct
     1381 cgttgaattc ggtttaccta tggggggtct agtgcgaagc aacagcgtaa acagtgaacc
     1441 gttaacagtg aacgggccga ttactcgagg agggctagcg tgtcctccac ccgtttaccg
     1501 ttcaccgttc actgttcacg cagttctttc cgggagccca tcatcatgac ggagaccctc
     1561 accggttccc aaatcctctg ccgtgccttg ctcgaccagg gcatcgacgt gctcttcggc
     1621 taccccggcg gtgcgatcat gccgttctat cacgccttgc ccgagtatcc cggtctgcgc
     1681 cacgtgctgg ttcggcacga gcaggccgcc gcccacgccg cggatgggta cgcccgggcc
     1741 agcggacgcg cgggtgtgtg tgtcgcgacc tcgggccccg gggcgacgaa tctggtcacc
     1801 ggcctcgcca ccgcccacat ggacaactct cccgtggttg cgatcacggg tcaggtccct
     1861 cgtgccatga tgggccgaga cgcgtttcag gagacagata tcatcgggat tacccagccg
     1921 atcaccaagc acaaccggct ggtggaggac atcgaggagc tcgaggaagc agtggccgag
     1981 gcgttctacg tcgcgcagga aggccgaccc gggccggtgc tgatcgatat tccgaaggat
     2041 gtgcagaatc agaagacgga gtggacgggc ggtcaggcgg tcaggcggtc aggcggtaac
     2101 cgggactcga ccgcccgacc gcccgaccga ccgtccggca tcgcagaagc cgcaaatctc
     2161 atagccgaag cccagcgccc cctcatcatg gccggtcacg gtgtgctgct ctctgacgcc
     2221 tatgccgagc tgcgcgccct tgccgagcgg accgggattc ccgtgatcac cacgctgcta
     2281 ggcatcagcg gttttcccga gtcgcatcca ctccacctgg gcatgccggg gatgcacggc
     2341 gaggtccacg tcaatcgcgc catccagcag gccgatctca tcatcggact cggcctgcgg
     2401 ttcgacgacc gggtgaccgg caacctcgcg gggttcgccc gtggggccaa ggtcatccac
     2461 gtagatctcg atcgctccga gatcggcaaa aacgtaccgg tggcgattgg gatcgtggga
     2521 gacgtgcggg aggtgctgtg ctcgctgttg gatacggtgg cgccgcgaca ctgcgacgca
     2581 tggcgtgagg agatcgcggg gtttgtccgg ccgcggcagg agaattttcg gggaggactg
     2641 acacccgaga ccatcctcga tgccatcgac agtgccacct cggggcgctg ctccattgtc
     2701 tcggatgtgg gccagcatca gatgtgggtc gccaagctct ttcgctatca gcgtcccaac
     2761 agccacatca cctccggcgg cctcggcacc atggggttcg cggtgccggc cgcgatgggt
     2821 gtggccctgg cccggccgga tgagccggtg tgggccatct cgggcgacgg cggtttccag
     2881 atgaatatgc aggagatcgc gacgatggtg caggaaggca tcccggtgaa gatggcgatc
     2941 ttcaacaacg ggtacttggg catggtgcgc cagtggcagc agttcttcca cggccgccgc
     3001 tactcggcca ctccgatctg gagtccggac tacgtgcggc tggctcaggc ctacggcatt
     3061 gcagggtggc gggtggagtc tgcggatcag gccgcgtccg tggtccgcga ggcgacggcc
     3121 gagcccggtc cggccctggt ggagttcgtg atcgagcagg aggcgaacgt gtaccccatg
     3181 attccgccgg gtggctctct ctctgagccg atcgaaagcg agcctgcgcc gcccctggtg
     3241 cccgcatgac ggtcgcgcgc gccgtgtcgg tgttgctgga agatcgttgg atcaccctga
     3301 accgcgcggt cgggctcatc cggcggcgca atctcccggt gcggagtctg gctgtagggc
     3361 cgactgacac gccgggactc tcgaggctca cgatcatgct tcactcggac acagcgacgg
     3421 ccgaccgggc cgtacagcat cttcagaagg tggtgggcgt ccgtgcggcg atggcatttc
     3481 cggcgcagga aggagtggtc cgtgagcttg ccctggtcaa ggtgcgtgcg ccgcacgagc
     3541 gatacggtga gctgctcgat gtggtccagc tgtacaatgc ttcggtggtg gacgactccg
     3601 ccgacgcgat gatcgtggag ctcagcggct ccgaggcctt cgtgctgtcg tgcatccggg
     3661 ccctcgagcg cttcggcgtc gtcgaggtgg cccggagcgg cacgatcgcg ctgggctcag
     3721 gcaatgacat tcaatccggg acgttaccat gaccgcacca gtgcgggtgt actacgatgc
     3781 cgatgccgac cgcagccgcc tcaaaggccg cacctttgcc atcattggat atggcagcca
     3841 gggacacgcc catgccctga accttcggga gagcggagcc gacgtggtcg tgggtctgcg
     3901 gcagggcgga ggatcatggg agcgtgcccg ggccgcgggt ctcgacgctc ggactgtgtc
     3961 cgaagcagcc gatgccgccg acgtcatcat gatgctggta cccgaccagg acgctcgagc
     4021 catctacgaa ggcggcgtcg agcagggcct tcgcccgggc aagacgttga tgttcgctca
     4081 cggcttcaat gtccactacg gcgagatcgt gccacccgat ggtgtcgatg tctcgatggt
     4141 cgcgcccaag tccccgggtc atctggtgcg gagcgagttc gaagcgggcc ggggcgtgcc
     4201 cgggctcgtc gccgtgcatc aggacgcgag cggcgaagcg ttggcgaacg ccctggcgta
     4261 tgccgccggg atcgggtgca cccgggccgg ggtcatcgag acctccttcc gggaagagac
     4321 cgagaccgac ctattcgggg agcaagcggt gctctgcggc ggcgtcaccg cgctggtgaa
     4381 ggccggcttc gagaccctca ccgctgccgg ctaccggccg gagatggcct acttcgagtg
     4441 tctccacgag ctcaagctca tcgtggacct gatgtaccgc ggcgggctcc agttcatgcg
     4501 ccactcgatc agcgatacgg cggagtacgg cgactatacc cgcggcccgc gggtgatcac
     4561 cgcgcaaaca cgagcggaca tgcgccggat tctcgatgcc atccaggacg gctcctttgc
     4621 ccgcgaatgg ctggcggaga accgggcggg ccgggccaac ttcgagcggc tgcggaaagc
     4681 cgaccatgac cacgagatcg agcgcgtcgg ggcggagctc cgcgctatga tgccgtggtc
     4741 tgaggaaggg aaggtcagcg gggcagcgag gcagcggggc agtgcaaaga cggagaagac
     4801 ggagaagcat gccccgagcg gaaacgaggg gacggagaag aagccgcgcg gcccgcgccg
     4861 tcccgcgcac ccgctgcccc gctaaaaaaa gccgcatgta cccgcggagc gggtgcatgc
     4921 ggccgctttt ctggaggggc atgcctaagt gaagcccaga actctattcg agaaggtctg
     4981 ggacgcccac gtggtgagcc agctacccaa cgggccggct ctcctgtacg tggacctgca
     5041 cctggtccac gaggtcacct cgcctcaggc gttcgagggg ctgcggctgg cgggccggcg
     5101 ggtgcgccgt cccgacctca ccgtcgccac agtcgatcac aacgtgtcta ccggcgaccg
     5161 gcggctgccc atcgccgacg aggtctccgc tcgccaattg gatgccctgg tgcggaacgc
     5221 ccgcgagttc gggatcgagc tgttcgatct ggattccccg gagcagggca tcgtccacgt
     5281 gatcggaccg gagctgggcc ttacccagcc cgggatgacc atcgtctgtg gcgattccca
     5341 tacctcgacc cacggcgcgt tcgggaccct cgcgttcggc atcggtacca gcgaggtgga
     5401 gcacgtgctg gccacccagt gtgtgatgca gagccgtccg aagaccctgg aagtccagtt
     5461 caccggtcgg gctcagcctg gaatctcggc caaggatctg atcctggccc tgatccgccg
     5521 catcgggatc tctggcggcg cgggacacgt gatcgagtac accggtgagg ccgtcagagc
     5581 gctgtcgatg gaaggccgca tgacggtctg caacatgtcc atcgaggcgg gggcccgggc
     5641 cggaatggtc gcaccggacg acaccaccgt cgcttatctg gccggcaggt cccgcgcgcc
     5701 taagggccgc gagtggaacc gggcggtcag cggctggagt gatttgcgaa gcgatcccgg
     5761 tgcccggtac gaccggcgag tcgtgctgga tgcgagcgcg atcgagcccc aagtcacctg
     5821 gggcaccaat cccgccatga ccgccactat ttccgagcgc gtgcccgatc cttcgcttgc
     5881 cgcctcaccc gcggagcgtg agtcgtacca gcgcgcgctc gattacatgg gtctgcgtcc
     5941 gggcctcccg ctcgagggct tgccggtcga tcgggtattc ctcggctcct gcaccaacgc
     6001 tcgactggag gatctgcgcg aagcggccag tgtggcactg ggccaccgag tggcgcgtgg
     6061 agtgcgcgcg atggtcgtgc ctggctcgca acgggtgaag gcggccgcgg agcaggaagg
     6121 actcgaccgc atcttcaccg atgccggttt cgaatggcgc aatcccggct gctccatgtg
     6181 cctcggcatg aacgaggatg tgctcggccc cggcgagcgt tgcgcatcga catcgaatcg
     6241 caacttcgag ggcaggcagg gaagaggagg ccgcacgcat ctggtgagtc cggcgatggc
     6301 ggctgcggca gcaatcgcgg gatgcctgac cgatgtgcgt gcgctcatgc agcgtgatcg
     6361 ccagtccgac gcagccgatg aacgttcgta tgcagcatct catgaagctt gaaccaagca
     6421 ctataactgc atttattacc gctcgttata gatctgacat aagaagcttt gtagctcagt
     6481 tgccggttgt tcgcgcataa agactaaagg atctatgcag ccgttcattt cccaccgcgg
     6541 gcgcgtcgcc gggctgcgac gagccaacgt cgacaccgat cagatcattc cgaagcagtt
     6601 cctgaagcgc atcgagcgct ccggcttcgg accgtttctg ttccatgact ggcgctacct
     6661 tcccgatggc cacgagaacc cggatttcga gctcaaccgg agcgaggctc gcggagc
//
LOCUS       DASYRV010000582         2479 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_776703, whole genome shotgun sequence.
ACCESSION   DASYRV010000582 DASYRV010000000
VERSION     DASYRV010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2479
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_776703"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..227
                     /locus_tag="VGQ24_15330"
     CDS             <1..227
                     /locus_tag="VGQ24_15330"
                     /inference="COORDINATES: protein motif:HMM:NF012703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="arginase family protein"
                     /protein_id="HEV8456270.1"
                     /translation="DLDALDPAFAPGVSHREPGGLSVREVIALVQKLAGVLIGADVVE
                     YNPRQDIGGVTAGVAAKLVKEVAGRMLQAG"
     gene            259..1326
                     /locus_tag="VGQ24_15335"
     CDS             259..1326
                     /locus_tag="VGQ24_15335"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEV8456271.1"
                     /translation="MKPDDANGRLRPEERPFRVLLIAGSNRRQYDCPGIDSKARALLF
                     RMADRLPQDWEIDLEDLGNVWNREQIRSCNACVSTSMALCVWPCNCYEKGSWGQPDLM
                     WNLDLYARLDLADAWAIIGPVNWYGMSSNLKAMFDRLVCMNGGNPREALIEHKDPALA
                     IELEHSPEWEQLSRNHLEGRSAAFFCYGDGGGDELNQAGRPKILRHPSWFDPEEEPFQ
                     EMRDCYAPLVWQCRYSGIEVPDALWRYAEFGRGKKYSDNQAEHMQEDGELLREFDGWT
                     EAFADHVAKKGKVTPGEYRAYGYHPPSHVWADLKTKWRGLRMALGFPIPGSSPAIQQD
                     LGLNRDTTLRYKKGEGARLRE"
     gene            1357..1656
                     /locus_tag="VGQ24_15340"
     CDS             1357..1656
                     /locus_tag="VGQ24_15340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456272.1"
                     /translation="MEVIARRELAALSRDGERRSVEVRLGKPVPSGRQGGEWACPMQI
                     VGLGPERIKEAFGVDSVQAIQLALRLATIDLHSLASSNAVRLEWLGGEIGFWPGA"
     gene            complement(1653..2429)
                     /locus_tag="VGQ24_15345"
     CDS             complement(1653..2429)
                     /locus_tag="VGQ24_15345"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(2016..2018),aa:Sec)
                     /transl_table=11
                     /product="peroxiredoxin family protein"
                     /protein_id="HEV8456273.1"
                     /translation="MARGSSCCSPTRTWKWSSFSTGSPSCEREFAPSRRSRASRLLTR
                     TAGRTYHLRMRLLPRFAAAAAVSLSLTAAAVAQGRPRLGPADGAGLPPIDTGRVAVGT
                     IAPDFTLESKDGGTVTLSQFRGKKTVVLVFYRGHWUTACTRQLGELKSLLDESLKRRV
                     ELIALSIDAREFLQKMVDQISADGIPATFTFLSDPGHKVIDRYGLLNPNGQGWPHPTT
                     YIIDRSGVVRWKVIDVDYNIRPSNQTIRDALAKLEGPGEA"
BASE COUNT          445 a          754 c          864 g          416 t
ORIGIN      
        1 tcgatctcga cgcgctggat ccggccttcg cgcccggcgt ctcccaccgt gaaccgggtg
       61 gcctctccgt ccgcgaggtc atcgccctgg tgcagaagct ggccggggtg ctaatcggcg
      121 cggacgtggt ggaatacaat ccgcggcagg atatcggcgg ggtgacggcg ggtgtcgcgg
      181 cgaagctggt caaggaagtc gcggggcgga tgctgcaagc gggctagctg cgtcccctgt
      241 caagcaggga gccacaccat gaaacctgat gatgccaacg gccggctgcg gccggaggag
      301 cgtccctttc gcgtgctgtt gattgccgga tccaaccggc gccaatacga ctgtcccggc
      361 atcgactcca aggcccgcgc cctgctgttc cggatggccg accggctgcc gcaggactgg
      421 gagatcgacc tcgaggacct tggcaacgtg tggaaccggg agcagatccg gagctgcaac
      481 gcgtgtgtct cgacctcgat ggcgctctgc gtctggccct gcaactgtta cgagaagggc
      541 agctgggggc agccggatct gatgtggaac ctcgatctgt acgcccgact cgatctggct
      601 gatgcctggg ccatcatcgg gccggtgaac tggtatggga tgagcagcaa cctcaaggcg
      661 atgttcgacc ggctggtctg catgaacggc ggtaacccgc gcgaagcgct gatcgagcac
      721 aaggaccccg cgctggcgat cgagctggag cattcgccgg agtgggagca gctctcccgc
      781 aaccacctgg agggccgctc cgccgcgttc ttctgctatg gagacggcgg aggggacgag
      841 ctcaatcagg cagggcgccc caagatcctg cggcacccct cctggttcga tccggaggag
      901 gagcccttcc aggagatgcg ggactgttac gcgcccctgg tctggcaatg ccgctatagc
      961 gggatcgagg tgcccgacgc gctctggcgc tacgccgagt tcgggcgggg aaagaagtac
     1021 agcgacaacc aggcggagca catgcaggag gacggcgagc tgctgcgcga gttcgacggc
     1081 tggaccgagg cctttgccga ccacgtcgcg aagaaaggca aggtgacccc aggcgagtat
     1141 cgcgcctacg gctaccatcc accgtcacac gtctgggccg atctcaagac caaatggcgc
     1201 gggctacgca tggccctggg ttttccgatc cccgggagct cacccgcgat tcagcaggac
     1261 ctgggtctca accgggacac gacgctccgc tacaagaagg gggaaggggc gagactgcgg
     1321 gagtagattt gatccggtcg aggttgggag gtcagcatgg aagtgattgc caggcgggag
     1381 ctcgccgcgc tgagtcgaga cggggagcgg cgctccgtag aggtgcggct gggaaagccc
     1441 gtgccgagcg gccggcaggg aggcgagtgg gcctgcccga tgcagatcgt cgggctgggg
     1501 cccgagcgaa tcaaagaagc gttcggagtg gattcagtgc aggcgattca gctcgcgctg
     1561 cggttggcca cgatcgacct gcactcgctg gcgtcctcga acgcggtgcg tttggagtgg
     1621 ctcggcggcg aaatcggctt ctggcccggc gcctaagcct ctcctggtcc ctccagcttt
     1681 gccaacgcat cacggatcgt ctgattggac ggccggatgt tgtaatccac gtcgatgact
     1741 ttccagcgca cgactcctga gcggtcgatg atatacgtcg tgggatgggg ccatccctgt
     1801 ccgttcgggt tcaagagacc atagcggtcg atcactttat ggcccgggtc ggacaggaag
     1861 gtaaacgtcg ccggaatccc gtcggccgag atctggtcga ccatcttctg cagaaactcc
     1921 cgcgcgtcaa tggagagtgc gatcagctcc accctccgct tcaagctctc gtccagaaga
     1981 ctcttcagct ccccgagctg acgggtacag gcggttcacc agtgtccccg gtagaagacg
     2041 agcacgacgg tcttcttgcc gcggaactgc gacagagtga cggtgccgcc gtccttggat
     2101 tcgagggtga agtcgggagc gatcgtgccc acggcgacgc gtccggtatc gatcggcggg
     2161 aggccggcgc cgtccgccgg ccccagcctg ggacgcccct gggccaccgc cgcggcggtg
     2221 agggacagcg agacagcggc ggcggccgcg aagcggggca gcaagcgcat gcgcaaatga
     2281 tatgtccttc cagcggtgcg cgtaaggaga cgcgaagctc tacttcggcg cgatggcgcg
     2341 aattcgcgct cgcagctcgg tgagccagtt gagaacgacg accacttcca cgtccgcgtc
     2401 gggctgcagc atgaggaacc cctggccatc gggagcgacg tcgtagttct gatgactcgt
     2461 actggtggag taattccct
//
LOCUS       DASYRV010000583         5263 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3044824, whole genome shotgun sequence.
ACCESSION   DASYRV010000583 DASYRV010000000
VERSION     DASYRV010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5263
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3044824"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(242..1477)
                     /locus_tag="VGQ24_15350"
     CDS             complement(242..1477)
                     /locus_tag="VGQ24_15350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456274.1"
                     /translation="MRKPTFPARNERGIALALVLFGLVIMGAVLTGSFMAVRLDTNSA
                     TYATFAAEAQGAAEAGLAQVYANWDPTTHSVMPIWDGTTATEIGRDLHDLNAAAPDPF
                     RQVADTVRRLNSQLFLVRAFGVRKGAGGQILAKLGVAQLFRISKPTIGVNAAVTVMDP
                     LKLNGDAFVISGMNALPDQWSAAECDPLDPGNGDDLVGIRSATATGMTGSDADNVFGY
                     PTADVPNDPSITDADFQDYLDYTYATLGAQPGVKLLPLSSTYNGVAPVLDISTLPPSC
                     DKSAPLNFGEPWRTPPTVGAIPQCYGYFPVVHGTGGTTKFGAGNRGQGTLLVDGDLEL
                     TGDFEWLGLIIVKGAIKINGNGNKLTGAVFAQGVDILTAGAVSGNVDIQYSKCAVDKA
                     VGGATLALPLGQRSFVQLY"
     gene            complement(1491..2423)
                     /locus_tag="VGQ24_15355"
     CDS             complement(1491..2423)
                     /locus_tag="VGQ24_15355"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEV8456275.1"
                     /translation="MLKRRGFTMIELMLSIVLLGAVGLLLARMLTTMLRVSTAQVQIA
                     GAQATSRTGVLAIPLEFREIGFDTLPNTGLAGDTDTDLQAIAANRITFRAMRGMGTTC
                     DISGYPNEIRVRLPAFGLREPLATDSFRLFVENDVNKGVDDQWVTLDVTNIDASSDCG
                     PEKALLLSVNQPKYDDGTDVPITQVMVGGPVRWFEVMEYGPAVDPFTTRAYLGARSIN
                     LGQNTLVPMVGPLSDSTGFALTYFDGDGVLLAPTVATNRIKVRSIGINLTGTTNAPVS
                     LSAVSLAVGSNRSRSNSPVFTRVALRNNLRETAP"
     gene            complement(2417..2803)
                     /locus_tag="VGQ24_15360"
     CDS             complement(2417..2803)
                     /locus_tag="VGQ24_15360"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HEV8456276.1"
                     /translation="MNDTSEHGMTIVEILVAIVVLAIGLLALAGGSLVVTRNLTGGRM
                     AMVASARADAQLDELRAIAASTPVRCTSANFANSAGPQTIDGVTLAWRIVPNAGAERH
                     VYIRTQYALPGGRGSKVDTLRAVIGC"
     gene            complement(2800..3261)
                     /locus_tag="VGQ24_15365"
     CDS             complement(2800..3261)
                     /locus_tag="VGQ24_15365"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEV8456277.1"
                     /translation="MFNQAQRSHRRSIRGFSLVEALIIVVILGILTLMLMPRFEPLVA
                     GRSVKSARASFTGLYQRARMAAVQNRVYATLKVSGGVAFATITTPWGGTQNVGNAVLF
                     DTDYRVTATATPDSVLIQPSGLVRTGLPFVLVLIRSDARDTVRITGYGQIQ"
     gene            3687..4199
                     /locus_tag="VGQ24_15370"
     CDS             3687..4199
                     /locus_tag="VGQ24_15370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456278.1"
                     /translation="MEPKAILPEEQAATSRKQFAAPMVADPMLGWRLLFAVGLLFVVV
                     GLLNLVLLWMPLQLGNAEYEFASVAASLDSLPLPTMGLVFVLAASRAAGKPASVRVAT
                     VLALVLAVVVLGMAALYWLDVPLALKAVRTGPVRLGILKSITKVTAQAILYPVALVVL
                     VRMANRGKQG"
     gene            4231..4962
                     /locus_tag="VGQ24_15375"
     CDS             4231..4962
                     /locus_tag="VGQ24_15375"
                     /inference="COORDINATES: protein motif:HMM:TIGR02595.1"
                     /note="PEP-CTERM proteins occur, often in large numbers,
                     in the proteomes of bacteria that also encode an
                     exosortase, a predicted intramembrane cysteine proteinase.
                     The presence of a PEP-CTERM domain at a protein's
                     C-terminus predicts cleavage within the sorting domain,
                     followed by covalent anchoring to some some component of
                     the (usually Gram-negative) cell surface. Many PEP-CTERM
                     proteins exhibit an unusual sequence composition that
                     includes large numbers of potential glycosylation sites.
                     Expression of one such protein has been shown restore the
                     ability of a bacterium to form floc, a type of biofilm;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-CTERM sorting domain-containing protein"
                     /protein_id="HEV8456279.1"
                     /translation="MRRIIRVILASLALATAMAGKASAASWLGNGTYCGGNTFTTCFS
                     VDLSWSSSSGTSTVVTLVMSNQSNDAGLKWFSVGLDNMPGGYTYTGSGDLGFAPPGNG
                     FSGSYFLAFTYAQGKNGGADPGFQINRTFTFNFTAGTSQNWDLILNSAGVGLHAGGLS
                     VIDPATGQPHSCSTKVVVRDRTPPPNTGGYTTNGPDGTDPLCENVFNPPTETPIPEPA
                     SMLLLATGLVAMGGVGIMRRRNRKV"
BASE COUNT          953 a         1601 c         1732 g          977 t
ORIGIN      
        1 gcgccagcgc gctcaccgtg gtgaggcggt accagtcgtt cggcgtgaaa gcgcggcttt
       61 gagcggtgag aagtgagtgg tgagaggtga gagggacaaa caaggcggcg ccgaacacca
      121 gtatgcgttt catggagatg gcctttgagg acgcggagtg acacgcgtct caaaaatagc
      181 gcggcgacca gcagcgcggg actaggtcgc gccgaggtcg ccgaaaggca gggtggttag
      241 ctcagtagag ctggacgaag ctccgctggc cgaggggcag ggccagggtg gcgccgccga
      301 ccgctttgtc gacggcgcac ttggagtact ggatatcgac attgccggag accgcgccgg
      361 cagtcagaat gtccacgcct tgcgcgaaga cggctccggt gagcttgttg ccgtttccgt
      421 tgatcttgat ggcgcccttg acgatgatca ggcccagcca ctcgaaatca ccggtcagct
      481 ccaggtctcc gtcgaccagc agggtgccct gaccccggtt gccggcgccg aacttggtgg
      541 tacccccggt cccgtgcacc acggggaagt agccataaca ctgggggatc gcccccacgg
      601 tcggcggggt ccgccacggc tccccgaaat tcaagggagc cgatttgtcg cagctcggcg
      661 gaagggtcga gatatcgagc accggagcga ccccgttata ggtgctgctc agagggagca
      721 gcttcacccc gggctgcgcc cccagggtgg cgtaggtgta gtccaggtag tcctggaaat
      781 ccgcgtcagt gatcgacgga tcgttgggca cgtccgcggt ggggtagccg aagacattat
      841 ccgcgtcaga gccggtcatc ccggtcgcgg tggcgctccg gatgccgacc aggtcatccc
      901 cgttgccggg gtcgagcgga tcgcattccg ccgcgctcca ctgatcaggc agcgcgttca
      961 tccccgagat gacgaaggca tcgccattga gcttgagcgg gtccatcacc gtcacggcgg
     1021 cattcacgcc gatggtcggc ttggagatcc ggaagagctg ggccaccccg agtttggcga
     1081 ggatctgccc accggcaccc ttccgcaccc cgaaagcacg caccaggaag agctggctgt
     1141 tgagccgccg cacggtatcg gcaacctggc ggaatggatc gggagctgcc gcgttgagat
     1201 cgtggagatc cctgccgatt tccgtggccg ttgtgccgtc ccagatcggc attacgctgt
     1261 gggtcgtcgg gtcccagttc gcatagacct gggccaaccc ggcctccgcc gcgccttgcg
     1321 cttcggcggc aaaggtcgcg taggttgccg aattcgtgtc cagccggacc gccatgaagg
     1381 agcccgtgag caccgctccc atgatgacca gaccgaacag cacgagcgcc agggcgatgc
     1441 ctcgttcatt ccgagcaggg aaagtgggct ttctcacggg attcaccagg ctagggggcg
     1501 gtttcgcgaa gattgttccg cagcgccacc cgcgtgaaca ccggcgagtt ggagcggctg
     1561 cggttactcc cgacggcgag cgaaacggca ctcagcgaaa ccggtgcgtt ggtcgtgccg
     1621 gtcaagttga taccgatgga acgcaccttg atccggttgg tggcgaccgt gggagcgagc
     1681 agcacgccgt cgccatcgaa ataggtaagg gcaaagcccg tactgtcgga cagcggcccg
     1741 accatcggca ccagggtgtt ctggcccaga ttgatcgagc gcgcgccaag atacgcgcga
     1801 gtggtgaagg ggtcgactgc tggaccgtat tccatgacct cgaaccagcg gaccgggccg
     1861 ccgaccatga cctgggtgat tggaacgtcg gtcccgtcgt cgtacttggg ctgattcacg
     1921 ctgaggagga gagccttttc gggtccgcag tcgctggagg cgtcaatgtt ggtgacatca
     1981 agagtcaccc actggtcatc gacacccttg tttacatcgt tctcgacgaa gagccggaac
     2041 gagtcggtgg ccagcggctc ccgcaacccg aacgccggca gccggacccg aatctcattc
     2101 gggtagccgg agatgtcgca ggtcgtcccc ataccccgca tcgcccggaa ggtgatccgg
     2161 tttgccgcga tcgcttgcag gtccgtgtcg gtgtccccgg ctagaccggt attcggcagc
     2221 gtatcgaagc cgatttcgcg gaattcgagc ggaatggcta gaaccccggt gcgcgaggtc
     2281 gcctgagcac ccgcaatctg cacctgcgcc gtggaaaccc gcagcatggt cgtcagcatc
     2341 cgagccagca gcagaccgac tgcgccgagc agcacgatgc tcagcataag ctcgatcatg
     2401 gtaaagccgc ggcgcttcag catccgatca ccgccctgag tgtgtcgact ttcgaccccc
     2461 ggcctcccgg cagcgcgtat tgggtccgga tgtacacgtg acgctccgct cccgcgttgg
     2521 ggacgattct ccaggccagc gtgacgccgt cgatggtctg tggcccggcg gagttggcga
     2581 agttggcgga ggtgcaacgc accggagtag acgcggcgat ggcgcggagc tcatcgagct
     2641 gggcatcggc ccgggcgctg gccaccatcg ccatccggcc gcccgtgagg ttacgcgtga
     2701 ccacgagaga tccccccgcc agcgcgagca ggccgatggc gagcaccacg atcgccacca
     2761 gaatctcgac gatggtcata ccatgttccg aggtatcgtt cattggattt gcccatagcc
     2821 ggtgatgcgc accgtatcgc gcgcgtcgga tctgatcagc accagcacga aggggagccc
     2881 ggtccgcacc aagccgctag gctgaatgag caccgagtcg ggtgtcgcgg tcgccgtgac
     2941 gcggtagtcg gtgtcgaaca gcaccgcatt ccccacgttc tgggttcccc cccatggggt
     3001 agtgatcgtg gcaaaagcca ctccgccgct gactttgagc gtggcgtaga cccggttctg
     3061 caccgcagcc attcgggcgc gctggtagag cccggtgaag ctcgcccggg cggatttgac
     3121 gcttctgccg gccacgagcg gttcgaatcg cggcatgagc atgagcgtca agattcccag
     3181 gatcaccacg atgatcaggg cctcgaccag cgagaaaccg cggatcgacc gccggtgcga
     3241 acgctgcgct tggttaaaca ttgacagtag tgccagcaag tgtggtgccg caggccaatg
     3301 cgttgaactt gaaaggatat atcgaattgc gctactcggt caggccatag ccgggcgagc
     3361 cgcatcgcat gttgcgactc tactcggagt tgttgcaccc gtgcaattca gtgcgttcct
     3421 ccagggcgac tccgtatccc ttgcgtccct gcacgctgag cgctaactcc tttgcggact
     3481 ctaatgatcg atcttcagtc aacggtctct tgtttgtgga gctgtgtcgt tgcgtggatg
     3541 caacataggg cggtcggggt cgattttcag agcagtaagt tattgagctg caataagttt
     3601 tgtcccagtt gcggtggacc tgtaaaggct cgattcatgc tcatgaagtt gacagggatg
     3661 gaccttactt caggctggga gctttgatgg agccgaaggc catcctaccg gaggagcagg
     3721 ccgcgacgtc tagaaagcag tttgcggccc cgatggttgc cgacccgatg ctggggtggc
     3781 ggctgctgtt cgcggtcggt ttgctgttcg tcgtggttgg gttgctgaac ctcgtgctgc
     3841 tctggatgcc gctgcagctc gggaacgcgg aatacgagtt cgcgtcagtg gccgcctcgc
     3901 tggacagctt gccgcttccc acgatggggt tggtctttgt gctggcggcg agtcgagcgg
     3961 cgggaaagcc ggccagcgtg agagtggcaa cggtgctggc cctggtcctg gcggtcgtgg
     4021 tgctggggat ggccgcactg tactggctgg acgttcccct ggcgctcaag gcggtgagaa
     4081 cgggcccggt ccgcctgggg atcctgaagt cgattaccaa ggtgaccgcg caggcaattc
     4141 tgtatcctgt cgcgctggtc gtgctggtgc ggatggcaaa cagagggaag cagggctagc
     4201 ggcaggaaat cctgagagga gctcggcagc atgaggcgga tcatacgagt aatcctggcg
     4261 agcctggcgc tcgcgacggc catggcgggc aaggcttcgg ccgccagctg gctggggaac
     4321 ggcacctact gcgggggaaa caccttcacg acctgcttct cggtcgacct gtcgtggagc
     4381 agttccagcg gaaccagcac cgtcgtcacg ctggtcatga gcaaccagtc gaacgacgcc
     4441 gggctcaagt ggttctcggt ggggctggac aacatgcccg gcgggtacac ctatacgggc
     4501 agcggggatt tgggcttcgc tcccccgggc aacgggttca gcgggagcta tttcttggcg
     4561 tttacctacg ctcagggcaa gaacggtggc gcggatccgg gcttccaaat caaccgcact
     4621 ttcacgttca acttcaccgc cggcacctcg cagaactggg acctgatact caacagcgcc
     4681 ggggtcggcc tgcacgcagg cggcctttcg gtcattgacc cagcgaccgg gcagccccac
     4741 agctgttcca ccaaggtggt ggtccgggat cgcactcctc cgcccaacac cggtggctat
     4801 accaccaacg gtccggacgg gacggacccg ctttgcgaga acgtcttcaa cccgcccacc
     4861 gagaccccga tcccggagcc cgcgagcatg ctgctcctgg ctaccggcct cgtagccatg
     4921 ggcggtgtgg gcatcatgcg ccgacgcaac cggaaagtct gatccaagag tctgccgagc
     4981 ggagagccct cctctctctc cgcttccaag cgccccggct ccggccgggg cgctttgttt
     5041 atgagacccc cgtcgcgttt tccattgtgt cggagtttca gacgctgtca gggagtccga
     5101 catacctttt tgctacctga gaaaacggcc gcttttcgtc aacttcctga acagaaaact
     5161 atcgatcgtt gcgctcgcat aatgctgtga aactggaccg tcaattgcat ttgccgcgtc
     5221 cgcgtttcgc tgctcagagc aaacccgccg aaaggcggtg acg
//
LOCUS       DASYRV010000584         3164 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2653255, whole genome shotgun sequence.
ACCESSION   DASYRV010000584 DASYRV010000000
VERSION     DASYRV010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3164
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2653255"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..214
                     /locus_tag="VGQ24_15380"
     CDS             <1..214
                     /locus_tag="VGQ24_15380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456280.1"
                     /translation="ALLTPFSKSTMICLGDYHHFPPLRGLDVIELTASMQIRLREISQ
                     TSHSCSSLADGCFGVLARLAFGYGTY"
     gene            641..3142
                     /locus_tag="VGQ24_15385"
     CDS             641..3142
                     /locus_tag="VGQ24_15385"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kelch repeat-containing protein"
                     /protein_id="HEV8456281.1"
                     /translation="MPALQRAAPKARVENAAGVWTRIPPPTLNQNGAVYDPLRQRLLV
                     FGGSDNDTVTNDLWELKLTGTPTWTRLQTTGSRPAARQAHGLLYDPRRDRLLLFGGAD
                     GSNQTLNDIWELPLAVAPLAWIQSLPLGLQPDPRAYASAIYDSTGDRVILFGGALAVS
                     DTGPPTNFLNDVWALPLDVAPAWTQLLPLGTPPSGRAGPQVIYDAGRGRMIVYGGFDG
                     TLLGDAFSLSLDASPQWTALAPTGGPPSPRAVAATIYDPPNDRLVLYGGIGGNGDSTL
                     TDVWSLALASPAWTEITPTGGPPSPRDFPTTVYDLQRRQMVIYAGRDTAQRTLGDVAW
                     GLNLEGLPQWTLLTDGPLGRYQSAGIYDPTRNRMLIYGGFDGTNWLGDTWSLTLDFDP
                     RWSQLTFSGSTPGPRTGHSAIYDLGRDRLVLFGGNFAMTGYNDVWTLSLGATPAWTQI
                     IPSGTPPSPRSTHSAFYDRRRDRMIVYGGNTGSQVGETWALDLSANVWTELDDGTLGP
                     SPSAFPAVAFDERNNQILVFSGLGQTDDVWVLSLSGTPTWNQIAVPGPRPAARYGAVA
                     AYDTLKEAMLLSGGNGNTSGSLNDSWALVLSGGPVWIPIDVGSDIPTGRTESVGVYDQ
                     ASGRLVLFGGTEFGFALRSDTWVLAVDRATPVLASLVSSTARPDRVDLVWQLAQSAAG
                     VQIERRERDEAWQPIATRDADGSGRLVFADANVTPGHRYGYRLGIPDGAGVTMTPEEW
                     VDVPFAPRLELAGFVPNPTVSGASVTFSLPNAGPARVEVLDVGGRRVFAREVGSLGPG
                     KHSVSLRGSRMPAGLYIIRLESGGRVVQRRSVLLR"
BASE COUNT          523 a         1039 c          989 g          613 t
ORIGIN      
        1 ggccttgtta acgccatttt ctaaatccac gatgatctgt cttggcgact atcatcattt
       61 ccctcctctt cgcggtctag atgttattga attgacggcg tccatgcaga tacgcctgag
      121 agagattagt caaacatccc actcttgctc cagcctggcc gatgggtgct ttggcgtcct
      181 ggcccggctg gccttcggat atggaacgta ttgatgtcgc tatagtcggt gccgggccgc
      241 tgggctcgcg gctgccaggg agctccatgg caagcggtat cgcgtccccg cggtgataag
      301 gcgtgaaggc tcggtgtgtc cgtctccggc ccatggtgat aagctgcgcg gccgaagcgt
      361 cggttgattc atggagtggg cttgaccgcg agagggctct cggtcccatc acacggaggt
      421 gatcatggct tcccccatgc gctcggcgtt cgcctgcgca atccgcgcgt ctgcagttct
      481 tctggtttcc atcctcttcg actccgcatc gccccaagcg gccatgtcgg gattcgtatc
      541 gcaccggatc cacaatcaag ctcgagcggc cggtgttgcg aatccgtggc atactcctgg
      601 gcagccgtcc gtagtccgcg ctcctgggca gcgagccgtc gtgccggccc tccagcgtgc
      661 agcgccgaaa gcgcgcgtcg agaatgccgc cggcgtatgg acccgaatcc cgcctccgac
      721 gttgaaccaa aatggcgccg tctacgaccc gctgcgccaa cgactgctgg tgttcggtgg
      781 gtccgacaac gacaccgtca ccaacgatct ttgggagctg aagctcacgg gcactcccac
      841 atggacccga cttcagacca cgggatcgcg tcccgcagca cgccaggccc atggcctcct
      901 ctacgacccc cgccgtgatc gtctgctcct cttcggcggt gcggatggtt cgaatcagac
      961 cctgaacgat atctgggaac ttccactcgc ggtcgcgcca ctcgcctgga tccagagcct
     1021 gccgctcggc ctacaacccg atccgcgggc gtacgcgtcg gccatctatg attcaacggg
     1081 cgaccgcgta atcctgtttg gtggagcact cgccgtatcg gacaccggac cgcccacgaa
     1141 tttcctcaac gacgtctggg cgttgccgct cgacgttgct ccggcatgga cccagctcct
     1201 gcccctggga actccgccca gcgggcgtgc cgggccgcag gtgatctacg atgccgggcg
     1261 cggccgcatg atcgtctacg gcggcttcga cgggacgttg ctaggagacg cgttctccct
     1321 gtcgctggat gccagtccgc aatggacggc gcttgcgcca accgggggcc cgccgtctcc
     1381 ccgcgccgta gcggcaacca tctacgatcc ccccaacgat cggttggtgt tgtacggcgg
     1441 tattggcgga aacggcgact caacgctcac cgacgtctgg tcgctcgccc tcgccagtcc
     1501 agcctggacg gaaatcaccc ccacgggcgg cccgccgagc ccacgcgatt tcccgaccac
     1561 ggtctatgat cttcagcgtc ggcaaatggt tatttacgcg ggccgcgaca cggctcaacg
     1621 gacactcggc gatgtggcct ggggactgaa cctcgaggga ctgccgcagt ggactctgct
     1681 cacggacggt ccactcggac gctaccaaag cgcgggcatc tatgatccga cccggaatcg
     1741 catgctcatc tatggtggtt tcgacggcac taactggctc ggcgatacgt ggtcgctcac
     1801 actcgatttc gatcctcggt ggagtcaact gaccttctcg ggttcaacac ccggcccacg
     1861 cacggggcac agtgccatct acgatttggg ccgcgaccgc ctagtcctct tcggtggtaa
     1921 ctttgccatg accggctaca acgacgtatg gacgctctcc ctcggcgcca cgcctgcctg
     1981 gacccagatc atcccatcgg gcactccacc cagtccgcgc agcacgcatt ccgcattcta
     2041 tgatcggcgc cgggaccgga tgatcgtcta cggcggcaat accggttctc aagtgggcga
     2101 aacgtgggcg ctcgacctat cggccaacgt atggaccgag ctcgacgacg gcactctggg
     2161 cccgagtccg agtgcattcc cggctgttgc cttcgatgaa cgaaacaatc agatcctggt
     2221 cttctcgggg ttggggcaga cggatgacgt ttgggtgctg tcgttgtccg gcacgccgac
     2281 gtggaaccag atcgccgttc cggggccgcg gccagccgcg cgctatggcg cggtggccgc
     2341 ctacgacacc ctgaaggagg cgatgttgct ttccggtggc aatgggaaca cctcggggtc
     2401 actgaacgat tcctgggcct tggtcctgag cggcggcccg gtgtggatcc cgatcgacgt
     2461 gggatccgat attccaaccg ggagaacgga gtcggtaggc gtatacgatc aagccagtgg
     2521 ccgtttggtc ctcttcggcg gcacggaatt cggttttgcg ctgcgctccg acacctgggt
     2581 gctggcggtt gaccgggcga cacccgtgtt ggcgtcgctg gttagcagca cagccagacc
     2641 cgatcgagtc gatctagtct ggcagcttgc gcagagtgca gccggcgtgc agatcgagcg
     2701 ccgtgagcgc gacgaggcct ggcaaccgat cgcgacgcgc gacgccgatg gctccggaag
     2761 gctggtgttc gcggacgcga acgtcactcc cggccaccgc tacggctatc ggctgggtat
     2821 ccccgatggg gccggagtta ccatgacacc cgaagaatgg gtcgatgttc cgtttgcgcc
     2881 gcgtctggag ctggcgggat tcgtccctaa tcctacagtc tcgggcgcca gcgtaacctt
     2941 ctcgctaccg aacgcgggcc cagcccgcgt cgaagtactg gacgtcggtg gccgccgggt
     3001 atttgcgcgc gaggtgggga gcctcggccc aggaaagcac tcggtgtcgc tccgcggctc
     3061 gagaatgcca gcgggtcttt acatcatccg gctcgagagc ggcggacgcg tggtgcagcg
     3121 ccggtcggtg ctgctcaggt aatcgcgccg aggcacaacc cgct
//
LOCUS       DASYRV010000585         3963 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3487221, whole genome shotgun sequence.
ACCESSION   DASYRV010000585 DASYRV010000000
VERSION     DASYRV010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3963
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3487221"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1028)
                     /locus_tag="VGQ24_15390"
     CDS             complement(<1..1028)
                     /locus_tag="VGQ24_15390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456282.1"
                     /translation="MTITTSTDGVELDSDGYGVAVDGSSPQAIGPDATATVDGLPEGQ
                     HTVELSGIAANCSAANNPRTVTVSAGGTTTAAFSITCGPTAGSVAVTTTTSGAGSDPD
                     GFAVTVDGLDRGAIGVNATISVASLTPGGYLVGLTGLAANCVVAGDNPLSVTVTSGQA
                     TPVGFTITCSAPPPGSGSLQITTATSGTSLDPDGYTVSLDGGNPQAVSTNGTLSIGSV
                     PPGSHTVQLREQAPNCTISGDNPRAVPISSGQTATVQFAITCVTPPPGSGSVQVTAAT
                     SGSSLDPDGYTLRIDEGSPQALTINGSRTVGTLTAGAHTVQLGGIAANCTVTGDNPRA
                     VTISSGQTA"
     gene            1253..2572
                     /gene="tilS"
                     /locus_tag="VGQ24_15395"
     CDS             1253..2572
                     /gene="tilS"
                     /locus_tag="VGQ24_15395"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR02432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEV8456283.1"
                     /translation="MTLIEQFRAHWTSLDLPSGRALVAVSGGPDSVALLDLLARSRDA
                     HGSELIVAHVDHGIHPDSRRVAEQVRELANAYGLQFEGGRLRLGSAAGETAARQERYA
                     WLDATRMRVGAQYIVTAHHADDQVETVLMRVLEGSGPAGLAAMAPVNGCLVRPLLAFR
                     RSQLLRYLEDAGLEAWLDPANADSRHLRSWIRSELLPLVRTRLPEVDARLERVVRQAA
                     RDRAAWDAVLDALPSLDLQVEPEAISVAASALAGYDSALAQAVVLAAARRIGCRLGPS
                     RVGRICALLKSGVSGARVPLGARWTAELTFGRLRLAADESPGVDAWTLEGGRGERAWG
                     RWRFRWELATAPEQQDRVGLSAWFTPDSLTVRAWAPGEKLKPLGGTGRRLIVRCFQEV
                     RVPRSRRGSWPVLAQYDDVIWIPGVCRSDARVPARGTEALRVDAEYA"
     gene            2556..3110
                     /gene="hpt"
                     /locus_tag="VGQ24_15400"
     CDS             2556..3110
                     /gene="hpt"
                     /locus_tag="VGQ24_15400"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006166 - purine ribonucleoside salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HEV8456284.1"
                     /translation="MLSTPEVVRRTGGLPVKSIVFDEAMIAARVQALAGEITRAYPDG
                     ELLVLGLLKGSFIFLSDLVRKIERPIQVDFLVASSYGDGQVSSGTVRLLYDPETRLEG
                     KHILVVEDIIDTGKTLQRLMELLEARRPRSLAICALLDKKLAPEPRPELRFVGFRAPP
                     AFLVGYGLDHAENFRHLPFIADLE"
     gene            3111..>3963
                     /locus_tag="VGQ24_15405"
     CDS             3111..>3963
                     /locus_tag="VGQ24_15405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent metallopeptidase FtsH/Yme1/Tma
                     family protein"
                     /protein_id="HEV8456285.1"
                     /translation="MADRHPNRPPRTNWGNLSKNLALWLLVGLLALALFQMMSRQRNP
                     TQEFSYTEFSKQLDQGNVARVEVFDGKRLEGDFRSPVTQDGRSAKSFQVLLPVANSEV
                     FIKRLEDANVPILAKEPKGGITAIIIAALPWIVILGLWFFLLRQLQAGGSRAFAFGKS
                     KAKLLAGDTPKVTFADVAGADEAKVELQEIIEFLKDPQKFTRLGGRLPKGALLVGPPG
                     TGKTLLAKAVAGEAGRPFFSMSGSDFVEMFVGVGASRVRDLFEQGKSHAPCIIFIDEI
                     DAVGRHRG"
BASE COUNT          623 a         1267 c         1362 g          711 t
ORIGIN      
        1 gcggtttgtc ccgagctgat cgtaaccgcg cgagggttgt ctcccgtgac agtgcagttg
       61 gccgcgattc caccgagctg aaccgtgtgt gcgccggccg tgagggtccc cacggtgcgg
      121 ctgccattga tggtgagggc ctggggggaa ccttcgtcga tccggagcgt gtatccgtcc
      181 gggtcgaggg aactgccgga ggtggcggca gtgacctgca cgctgccgct gcccggcgga
      241 ggtgtcacgc aggtgatggc aaactgcacc gtagcggttt gtcccgagct gattggaacc
      301 gcgcgagggt tgtcccctga gatcgtgcag ttgggtgcct gctccctcag ctgcacagtg
      361 tgcgagcctg ggggaacgct cccgatcgac agcgtcccgt tggtgctgac agcttgagga
      421 ttgccgccgt ccaggctcac cgtgtacccg tccggatcga gggacgtccc cgaggtggcg
      481 gtggtgatct gtaggctgcc gctgcccggc gggggagccg agcaggttat ggtaaacccg
      541 accggagtag cctggcccga tgtcaccgtc acactgagtg gattgtctcc cgcgactacg
      601 cagttcgccg ccagaccagt cagccctacc aaatagccgc ccggtgtaag gctggcaacg
      661 ctgatggttg cgttcacgcc gatggctccg cggtccaagc catcgaccgt gaccgcgaac
      721 ccgtcggggt ccgagcccgc gccgctggtg gtggtggtca ccgcgacgga gccggcggta
      781 ggtccacacg taatggaaaa ggcggccgtg gtggtccctc cggcactcac cgtcacggtg
      841 cggggattgt tcgccgccga acagtttgcc gcgatccccg ataactccac cgtgtgctgc
      901 ccctccggga gcccgtcaac cgtggccgtc gcgtccggtc ctatggcctg cggcgagctt
      961 ccatccacgg cgacgccata gccgtcggaa tcgagctcga cgccgtcagt ggacgttgtg
     1021 atggtcaagg acggaaggac aatgtcggtg ccgccgccac cgcagccaag ccaggccagc
     1081 ggtgccgccc acagcaaaat ccttccccaa cattttcgtg cgggtccggt ggccatccag
     1141 gactccaggg agggcccggg tacggaagag gtcccccggg aggtaggctg taagcaaccc
     1201 cggtggaccc gacaattcaa gttaggtcag tgctcgtcgt tacctttgaa gcatgaccct
     1261 tatcgagcag ttccgggccc actggaccag cctcgacttg ccgagtgggc gtgctctggt
     1321 ggctgtttcc gggggaccgg actccgtcgc tctcctggac ctcctggccc ggagccggga
     1381 cgcccacggg tcggagctga ttgtggccca cgtggatcat ggtatccacc cggacagccg
     1441 acgggtcgcc gagcaggtgc gggagctcgc caatgcctac ggacttcagt ttgagggggg
     1501 ccggttgcgc ctgggatcag ccgcgggaga aaccgcagcc cgtcaggagc gatacgcctg
     1561 gctcgacgcg acccggatgc gggtcggagc acagtacatc gtcaccgcgc accacgcgga
     1621 cgatcaggtc gaaacggtcc tgatgcgggt tctggagggg tccggacccg ccgggctggc
     1681 ggccatggcc ccggtaaacg gttgcctggt ccgccctctt cttgcgttcc ggcgctcaca
     1741 attgctgcga tacctggagg acgcggggct tgaggcctgg ctcgatcccg ccaatgccga
     1801 ctcgcggcac cttcggtcct ggattcgctc cgagctcctc cccctcgtgc gcacgcggct
     1861 gcctgaggta gatgcccggc tcgagcgggt cgtccgacag gccgcgcgcg accgagccgc
     1921 ctgggatgcg gtgctggacg cgttgccatc tctcgatttg caggtcgaac ccgaggcaat
     1981 ttccgttgct gcgtccgcgc tcgcgggcta tgattcagcc ttggcgcaag cggtcgtgct
     2041 cgccgcagct cgccgcatcg gttgcaggct gggcccgtcg cgagtgggcc ggatttgcgc
     2101 tctgctgaag agcggcgtca gcggcgcgag agtgccgctg ggtgcccgat ggacggccga
     2161 actgacgttt ggccggttgc gcctcgcggc ggacgagtcc cccggggtgg acgcctggac
     2221 cctggagggc ggacggggcg agcgggcatg ggggcgctgg cgtttccgct gggaactggc
     2281 gaccgccccc gagcagcagg atcgagttgg tctgagtgcc tggtttactc ccgactctct
     2341 caccgtccgc gcatgggcgc cgggtgagaa gctcaagccg ctcggcggaa ccggccgccg
     2401 actgatcgtc cggtgctttc aggaggtgcg ggtgccccga agccggcgcg gttcctggcc
     2461 ggtactggcg cagtacgacg atgtcatctg gattccgggc gtctgccgct ccgacgctcg
     2521 cgtcccggcc cggggaacgg aggcactgcg cgtcgatgct gagtacgcct gaggtcgtcc
     2581 gccggacagg gggactcccg gtcaaatcga tcgtctttga tgaggcgatg attgccgccc
     2641 gggtccaggc gctggccggg gagatcaccc gggcctatcc tgacggcgag ctactggtgc
     2701 tcgggctcct caagggcagc ttcatcttcc tgagcgacct ggtccggaag atcgagcgac
     2761 cgattcaggt ggattttctg gtggcaagct cgtacggcga cgggcaggtg tcgagcggca
     2821 cagtccggct gctctatgat cccgaaaccc ggctcgaggg caaacatatc ctcgtggtgg
     2881 aggatattat tgatacaggt aagaccctgc agcgcctgat ggagctgctg gaagcgcgac
     2941 ggccccgaag cctggctatc tgcgcacttt tggacaagaa gctggcaccc gagccgcgcc
     3001 cggagctccg attcgtcgga ttccgggcgc caccggcctt tctggtcggc tatggtctcg
     3061 atcacgccga gaactttcgt catctcccgt tcattgcgga cttggaataa atggcagacc
     3121 gacatccgaa ccggccccct cgcaccaact gggggaacct gagcaagaac ctggcccttt
     3181 ggctgctggt gggcttgctg gcactggctc tctttcagat gatgagccgg cagcgcaatc
     3241 ctacccagga attctcctac accgagttca gcaaacaact cgaccagggg aacgtggcgc
     3301 gggtcgaagt attcgatggc aagcggctgg aaggtgattt ccgcagccca gtgacgcagg
     3361 atggccgcag cgccaagagc ttccaggtgc tgctaccggt ggcgaacagc gaggtattca
     3421 tcaagcggct cgaggatgcc aacgttccca tcctggccaa ggagccgaag ggtggcatta
     3481 cggccatcat catcgcggcg ctcccctgga tcgtcatcct cgggctctgg ttcttcctcc
     3541 tgcgtcagct ccaggccggc ggcagccgcg ccttcgcctt cggtaaatcc aaggccaagc
     3601 tgctcgcggg cgacacgccg aaggtcacgt tcgccgacgt cgccggggcc gacgaggcca
     3661 aggtcgagct tcaggagatc atcgagttcc tgaaggaccc ccagaagttc acccggctgg
     3721 gcggccggct tcccaagggc gccctgctcg tcggcccgcc ggggaccggc aagacgctgc
     3781 tggccaaggc cgtggccggg gaggccggcc ggcccttctt ctccatgtcc ggctccgatt
     3841 tcgtggagat gttcgtgggt gtgggggcga gccgggtgcg cgacctcttc gaacagggca
     3901 agtcgcacgc gccctgcatc atcttcatcg atgagatcga tgcggtggga cgccaccgcg
     3961 gcg
//
LOCUS       DASYRV010000586         4277 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3274735, whole genome shotgun sequence.
ACCESSION   DASYRV010000586 DASYRV010000000
VERSION     DASYRV010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4277
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3274735"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1572)
                     /locus_tag="VGQ24_15410"
     CDS             complement(<1..1572)
                     /locus_tag="VGQ24_15410"
                     /inference="COORDINATES: protein motif:HMM:NF025309.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate mutase L"
                     /protein_id="HEV8456286.1"
                     /translation="MTADPRRPLRTIVATDCGSTTTKAILIEQVGDEYRQTYRGEAPT
                     TVEAPFEDVTRGVLNAIAEIEELSGRKILDGEKIITPSGAFGDPKVGVDIYISTSSAG
                     GGLQMMVAGVVQSMTAESAQRCALGAGAIVMDVLASNDGRLPHEKIERIRSLRPDMIL
                     LSGGTDGGTVTHVMEMAEYIAAAEPRPRLGMSYNLPLIYAGNKDARARISEILGKKTA
                     LTITENLRPVLEKENLGPARAKIHDLFLEHVMAQAPGYKKLISWAGAPIMPTPAAVGL
                     IMETIARKQGINLIGVDIGGATTDVFSVFHGIFNRTVSANLGMSYSISNVLAEAKLDN
                     IMRWVPFSIDEQDLRNRIKNKMIRPTTIPQTLDELQIEQAIAREALRLALLHHKSLAT
                     GLKGVQQERSISDVFEQKASGETLVDMLQLDLIVGSGGILSHAPRRVQSLLMMVDAYE
                     PCGFTELAVDSIFMMPHLGVLSTVSEQAATDVFVRDCLIHLGTCVAPIGQGAWGERCA
                     DYTITFPSGRELVKGT"
     gene            complement(1569..1940)
                     /locus_tag="VGQ24_15415"
     CDS             complement(1569..1940)
                     /locus_tag="VGQ24_15415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456287.1"
                     /translation="MGHEGGEKGGGVLAKRLNGLTARVRHAFALEPEGQPLSPEDMAL
                     LERVAATVVERGMATPAILFLESVGPMNFLGSQALHFFTPIIEVVFPQRDVERVAHLL
                     ERRDTLSRLTVLIERRTAPRP"
     gene            2363..2956
                     /locus_tag="VGQ24_15420"
     CDS             2363..2956
                     /locus_tag="VGQ24_15420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456288.1"
                     /translation="MIVSLQDGNKYVQEQINLVTQEMREAKKDRERVESERKMLAAKL
                     EAQVSENRKLALENERLANKQALAEQALRVEDKGGQSEDLQKSIAVVCKATEEALSRN
                     GYTLLVSARMDQKAVYVTERKISPPASLEVSGFRNQYLVSLHALPSNRTRVHVKADFE
                     KMAQGNRVVAVGPEETADIERRLITEIIKTLAAPGKI"
     gene            complement(2953..3852)
                     /gene="lipA"
                     /locus_tag="VGQ24_15425"
     CDS             complement(2953..3852)
                     /gene="lipA"
                     /locus_tag="VGQ24_15425"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010331747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HEV8456289.1"
                     /translation="MSRPIPMLHEQRPRLPAWFKVELRQGPDYQEIRRLTQELNLHTI
                     CEEARCPNVWECWNNRTATFLILGDICTRRCHYCAVTTGRPLPLDEAEPERVAAAVKR
                     LGLRHAVITSVNRDELPDGGARIFAETIRAIRRELPTCTIEVLIPDFLGDLAALETVL
                     AAKPDILNHNIETVPRLFPSVRPQGKYQRSIAVLEAAASCGAVTKSGLMVGLGETLEE
                     VRTVMRGLHAAGCAILSIGQYLQPTKAHWPVLRFYPPEEFRLLKAEGLALGFRHVESG
                     PLVRSSYHAAEQASCRSVTPTSV"
     gene            complement(3872..>4277)
                     /locus_tag="VGQ24_15430"
     CDS             complement(3872..>4277)
                     /locus_tag="VGQ24_15430"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HEV8456290.1"
                     /translation="LEEGLIVPVLRDCGSKTLAQIAEAERALVARARSRDLSPEEYTG
                     ATFLISNLGKFDVESFSAVILPPAASALAVGSVREVPVVRDGRVEVGHRMMLTLSCDH
                     RVIDGAVAAQFLQTFKQELEHPHPSLPPRGGG"
BASE COUNT          770 a         1405 c         1338 g          764 t
ORIGIN      
        1 ggttcctttc accaactctc gtccgctcgg aaacgtgatg gtatagtccg cgcaacgctc
       61 cccccaggcg ccttgcccga tcggcgccac gcacgtgccc aggtggatca ggcagtcccg
      121 gacgaacacg tcggtcgcgg cctgctcgct gacggtggag agcaccccca gatgcggcat
      181 catgaatatg ctgtccacgg ccagctcggt gaacccgcac ggctcgtacg cgtcgaccat
      241 catcagcaga gactgcaccc ggcgcggggc atgcgagagg attcccccgc tgccgacgat
      301 cagatcgagc tgcagcatgt ccacgagcgt ctcccccgac gccttctgct cgaacacatc
      361 tgagatggac cgctcctgct ggaccccctt cagcccggtc gccagggact tgtggtgaag
      421 gagggccagg cgcagggcct cgcgcgcgat ggcctgctcg atctggagct cgtccagggt
      481 ttgcgggatc gtcgtcgggc ggatcatctt gtttttgatc cggttgcgca agtcctgctc
      541 atcgatcgag aacggcaccc agcgcatgat gttgtcgagc ttcgcctcgg ccagcacgtt
      601 cgagatgctg tagctcatgc ccagattggc cgatacggtc cggttgaaga tgccatgaaa
      661 caccgagaac acgtcggtgg tcgccccgcc gatgtccaca ccgatcaggt tgatcccctg
      721 ctttctggcg atcgtctcca tgatgagccc caccgccgcc ggggtcggca tgatcggcgc
      781 gcctgcccag gagataagct tcttgtagcc cggtgcctgc gccatgacgt gctccaggaa
      841 caggtcgtgg atcttcgcgc gagcgggccc gaggttctct ttctccaata cgggccgtaa
      901 gttctcggtg atggtcagtg cggtcttctt gccgaggatc tcgctgatgc gcgcgcgggc
      961 gtccttgttg ccggcgtaga tcagcggcag gttgtagctc atgccgagcc gcgggcgggg
     1021 ctcggcggcc gcgatgtatt ccgccatctc catcacgtgc gtcacggtac cgccgtccgt
     1081 cccgccggag agcaggatca tgtccggacg cagcgagcgg atgcgttcga tcttctcgtg
     1141 cggcagacgc ccgtcgttcg aggccagcac gtccatcacg atcgccccgg cgccgagggc
     1201 gcaccgctgg gcgctctcgg ccgtcatgct ctgcacgacc ccggccacca tcatctggag
     1261 cccgcccccg gcgctgctcg tggagatgta gatgtccacg ccgaccttcg gatcaccgaa
     1321 cgccccgctc ggagtgatga tcttctcgcc gtcgaggatc ttccggccgg agagctcctc
     1381 gatttccgcg atcgcattga ggactccgcg ggtgacgtct tcgaagggcg cttccacggt
     1441 ggtgggcgcc tccccccggt aggtctgccg gtactcatct cctacctgct cgatcagaat
     1501 ggccttggtc gttgtgctgc cgcagtccgt cgcgacgatc gtgcggagcg ggcggcgtgg
     1561 gtctgcggtc atgggcgtgg cgccgtacgt cgctcgatca ggaccgtcag tcgcgagagt
     1621 gtgtcgcgcc gctcgagcag atgggccacc cgctccacgt cacgctgggg gaaaaccacc
     1681 tcgatgatgg gagtgaagaa gtgcagggct tggctgccga ggaaattcat cggcccgacc
     1741 gactcgagga acaggatggc cggcgtcgcc atcccgcgct ccacgacggt cgccgcaact
     1801 cgctcgagca gggccatatc ttcaggggag agcggctggc cttccggttc cagggcaaag
     1861 gcatgccgga cccgggcggt cagcccgttc agccgtttcg ccagaacgcc cccacccttc
     1921 tctcccccct catggcccat tgcatctggg ggagcaatgg gcgccccgga gggtgggggt
     1981 ggggggattc ccttaggatg aaacggtctc atagacactc gcaggcgagg cttcgcccta
     2041 tgaacgagag gccattataa gaacgggtca gaacagagtc aatgaagtgt cgcgtcatcc
     2101 ttttctctgg aaatcttcct cccgtctcca gtatccttct gcgatccgag gcaaccacct
     2161 cgctcccggc cagcggctaa ggtgtccccg taatatggct aaacccgatt ccaccaggcc
     2221 ttttcaccct caacttgcgc cctatgtcgg agcgatcctt ttggtcgccc ccctggtcct
     2281 ggctccggga tgcaaaccga acgattctcc gctcaaggaa gagaacgagc gcctccgaga
     2341 gcaagcggcc aggcaggact ccgtgattgt ctcgctgcag gatgggaaca agtacgtgca
     2401 agagcagatc aacctggtca cccaggagat gcgggaagcc aagaaagacc gcgaacgtgt
     2461 ggagtcggag cgaaagatgc tcgcagccaa actggaagcg caggtttcag agaaccggaa
     2521 gctggcgctg gagaacgagc gcctggcgaa caagcaggcc cttgccgaac aagcgttgcg
     2581 cgtcgaagac aaggggggcc aatccgaaga cttgcaaaaa tcgatcgcag tggtctgtaa
     2641 ggccaccgag gaggcgctgt cgcggaacgg gtataccctc ctggtgagcg cgaggatgga
     2701 ccagaaggcg gtgtatgtca ccgaacggaa gatctcgcct ccggcctcgc tcgaggtctc
     2761 cggatttcga aatcagtacc tcgtgtctct acacgccctc ccgtccaacc gcacccgtgt
     2821 acacgtcaaa gctgactttg agaagatggc tcagggcaac cgcgtggtgg cggtgggacc
     2881 tgaagagacc gctgacattg agcggaggct gatcaccgag atcataaaaa cgctcgcggc
     2941 tcccggaaag atctaaacag aagtgggcgt cacagatctg caggaagcct gctcggcagc
     3001 gtgataggag ctacgcacca gagggccgga ctccacatgg cggaagccca gcgccagtcc
     3061 ttccgccttg agcagccgga actcctccgg cgggtagaag cgcaggaccg gccagtgggc
     3121 cttcgtcggt tgcaggtact gtccaatcga gaggatcgcg catccggccg cgtggagccc
     3181 ccgcatcacc gtacgcacct cttccaatgt ttcacccaga ccgaccatga gcccggactt
     3241 ggtgaccgcc ccgcagctgg ccgccgcctc gagcaccgca atcgaccgct ggtacttccc
     3301 ctgaggccgg actgacggga acaggcgcgg gacagtttcg atgttgtggt tgaggatgtc
     3361 aggcttggcc gccaggactg tctccaatgc ggcgaggtcg ccgagaaaat ccggaatgag
     3421 gacctcgatc gtgcaggtcg gcagttcccg cctgatggcc cggatcgtct cggcgaagat
     3481 ccgcgcgccg ccgtctggca actcatcgcg gttgaccgac gtgatcacgg catggcggag
     3541 tccgagcctc ttcaccgccg ccgccacccg ttcgggctcc gcttcatcca gcggcagcgg
     3601 ccggccggtg gtcaccgcac agtagtggca ccggcgcgtg caaatgtcgc caaggatgag
     3661 gaacgtggcc gtccggttgt tccagcactc ccagacgttc gggcaccgcg cctcttcgca
     3721 gatcgtgtgg aggttcagtt cctgggtgag ccgccggatc tcctgatagt ccggcccctg
     3781 gcgcaattcc accttaaacc acgccggcag gcgcggcctc tgctcatgga gcatcggaat
     3841 gggtctgctc atagggacct cccccccacc ctcaccctcc ccctcgaggg gggagggatg
     3901 ggtgggggtg ttccagttcc tgcttgaacg tctgtaggaa ctgcgcggcc accgcgccgt
     3961 caatcacacg gtgatcacat gataatgtga gcatcatccg atggcccacc tcgacgcggc
     4021 catcccggac gacgggcacc tcccgcacgg agcccaccgc gagcgccgaa gcggcgggcg
     4081 gcaggatcac cgcgctgaag ctctccacat cgaacttacc cagattggag atcagaaacg
     4141 tcgcgcccgt gtactcctcc ggcgacagat cgcggctccg cgcccgggcc acaagcgccc
     4201 gttccgcctc ggcgatctgc gccagggtct tgctcccgca gtcgcgtagt accggcacta
     4261 tcagcccttc ctcgagc
//
LOCUS       DASYRV010000587         1683 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2840818, whole genome shotgun sequence.
ACCESSION   DASYRV010000587 DASYRV010000000
VERSION     DASYRV010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1683
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2840818"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..182
                     /locus_tag="VGQ24_15435"
     CDS             <1..182
                     /locus_tag="VGQ24_15435"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEV8456291.1"
                     /translation="TADVPVVPPTLGFQEALERLRSSRLPALPVVDGAGALVGLLTQD
                     NITDHLLVRRAGGDL"
     gene            complement(251..>1683)
                     /locus_tag="VGQ24_15440"
     CDS             complement(251..>1683)
                     /locus_tag="VGQ24_15440"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HEV8456292.1"
                     /translation="MRVDLSRPLPAGGVLDLEIAWHFPVPDYGAGRMGRDGSLYEIAQ
                     WYPRLAVYDDVRGWNHEPYIGAGEFYLEYGSFDVSITLPANYVVGATGTLRNPEVVLT
                     PSQRSRLAAARQSLEPVAVITAGEAGVTGRTRPAASGQLTWRFTADSVRDFAFAAAPN
                     FRWDASGYNGILVHTLYRPSAPEWQEANRMVRDALRYYSEQWYRYPYPQITSVEGPIE
                     GMEYPMITFDPRAPTREERQWVLAHELGHQWMPMVVGSNERLYPWMDEGFNTFIDLAG
                     AARYFAGTAYGDSIEVHPLHLYADHAIAGHEQPLSSRPVEVKDLFWTGYQKPALMMQT
                     LRYEVLGKERFDHAFREYMKAWAFKHPTPADFFRIMRDASGMDLDWFWRDWVFTTARL
                     DQAVDSVGAAKIYLANRGTMTLPLEMDVAYADGTTERIRLPVEMWNQGPRFAYRTRAE
                     KVVRRVVVDPRRVLPDVDRSNNERGR"
BASE COUNT          288 a          577 c          531 g          287 t
ORIGIN      
        1 tgaccgcgga tgtcccggtt gtgcccccga cgctcggctt ccaggaagcg ctcgagcgcc
       61 tgcggtccag ccggctgccg gcgctgccgg tcgtcgatgg cgcgggcgcg ctggtggggc
      121 tcctcaccca ggacaacatc accgaccatc tcctggtacg gcgcgccgga ggtgatttat
      181 aggtccctcg cggagcctgt cctgagcgca gcgaagagct cgggatgagg tgtccctgag
      241 cggggcgggc tcaccggccg cgctcgttgt tggaccgatc gacatcgggc agcacccgcc
      301 ggggatccac caccacccgc cgcacgacct tctccgctcg cgtccgatag gcaaaccggg
      361 gcccctggtt ccacatctcg accggcagcc ggatgcgctc cgtcgtgcca tcggcatagg
      421 ccacatccat ctcgagcggc agcgtcatcg tcccgcggtt ggccaggtag atctttgccg
      481 cccccaccga gtccaccgcc tgatccaggc gagcggtggt gaagacccaa tcgcgccaga
      541 accaatcgag atccatccct gacgcatcgc gcatgatccg gaagaaatcg gccggggtag
      601 ggtgcttgaa cgcccacgcc ttcatgtatt cgcggaaggc gtgatcgaac cgttcctttc
      661 ccagcacctc gtagcgcagc gtctgcatca tgagcgccgg cttctggtag ccggtccaga
      721 agaggtcctt cacctcgacc ggccggctcg agaggggctg ctcgtgcccg gcgatcgcat
      781 ggtcggcgta cagatgcagc ggatgaacct cgatggagtc cccgtacgcg gtccccgcga
      841 aatagcgcgc cgcgccggcc agatcgatga acgtgttgaa cccttcatcc atccagggat
      901 agagtcgctc gttcgacccg acgaccatcg gcatccactg atgcccgagc tcgtgggcga
      961 gcacccactg gcgttcctct cgagtcggag cccggggatc gaaggtgatc atcggatact
     1021 ccatcccctc gatcggccct tcgacactgg tgatctgagg gtagggatag cggtaccact
     1081 gctcgctgta gtatctcagc gcatcccgta ccatccgatt cgcctcttgc cactcggggg
     1141 cggagggccg gtagagagtg tgaaccagta tcccattgta cccgctcgca tcccaccgga
     1201 agttcggggc agccgcgaag gcgaaatcac gcacactgtc ggcggtgaat ctccaggtga
     1261 gctggccgga ggccgctgga cgagtccggc cggtcacgcc cgcctcgcct gcggtgatca
     1321 cggccacggg ctcgagcgat tggcgagccg ccgcaagccg cgaccgctgc gacggcgtga
     1381 gcaccacctc ggggttccgc agcgtgccgg tggcgcccac cacgtaattg gcaggtagcg
     1441 tgatgctcac gtcgaagctg ccgtactcca ggtagaactc cccggcgccg atatacggct
     1501 cgtggttcca gcccctgaca tcgtcataca ccgcaagccg ggggtaccac tgggcgatct
     1561 catagagcga tccgtctcgt cccatccgtc cggctccgta atccggtacc ggaaagtgcc
     1621 aggcgatctc cagatccagc actccgccgg ccgggagtgg tcgggaaaga tcgactcgca
     1681 tgg
//
LOCUS       DASYRV010000588         6691 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2427770, whole genome shotgun sequence.
ACCESSION   DASYRV010000588 DASYRV010000000
VERSION     DASYRV010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6691
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2427770"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..773)
                     /locus_tag="VGQ24_15445"
     CDS             complement(<1..773)
                     /locus_tag="VGQ24_15445"
                     /inference="COORDINATES: protein motif:HMM:NF013219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEV8456293.1"
                     /translation="MSSARLALLGAAVIACLTLGLSAGAVPLPLREVWAGLWHADAGA
                     AAIVRDLRAPRVILAFLVGGSLAICGAALQAMIRNPLAEPYLLGLSSGAGLGAVMAIA
                     SRAAGAWAVPLAAFAGALGAVALVYRLSLVSGRRLDPHVLLLSGVVVGSFAGALMSAI
                     MVLSDAPGVRNAFLWLLGGFGTASWRALVVFTAYATIPLALLLFHARSLDLIALGDEP
                     AHHLGADVDRIRRLVYLCTALLTAASVATCGIIGFVGLVV"
     gene            complement(770..1696)
                     /locus_tag="VGQ24_15450"
     CDS             complement(770..1696)
                     /locus_tag="VGQ24_15450"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helical backbone metal receptor"
                     /protein_id="HEV8456294.1"
                     /translation="MGGIIYETLTLQRAVRALLTSTLLGVSLAGTGCHEHPREVSGGT
                     WVVDDAGDTVRLQAPARRVVSLIPSSTELLFAIGAGASLVGRTSYCDYPSAAKAVPDL
                     GDGIKPSIEAVLSRRPDLVILYNSGQNAAVAGRLRELGIPALRVNTDALGDVDRVARI
                     LGTLTGRQHGADSVAAAFDTALAAATRPAKGPRPRILLLVWEQPPMTIGRGSFLHELV
                     ERAGGENLFADVAASSGVVSIEAVTARDPDLIFTTTEGAASFATRPEWQVVRAIREHR
                     FLRVSGSEFNRPSPRAPAAIRELTARMETARR"
     regulatory      complement(1792..1918)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            complement(1964..3106)
                     /locus_tag="VGQ24_15455"
     CDS             complement(1964..3106)
                     /locus_tag="VGQ24_15455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456295.1"
                     /translation="MTGRAGKWFRINAAACATLAVFPVFPVFPALFAQTVRTTGRVLS
                     ADATPVRGTRVVLHRVGSDNQGPIDSTRSDGRGRFQFTFRPDTSAFYLLSAEHAGIEY
                     FSQPVPTNPQRPDTGIRILVYDTSSTTPISLEARHLVITRPGEDGSRGVLDLMVLRND
                     TRLTRTTSDTTHPTWSAPLPPGTVGLDVSESDFSRDAVARRGDSMLVVAPFAPGEKQL
                     TVQYLIPSGRTAVEFPFGRPGAAINVLAEETGVRVTGSGVALADSQVLQGRSFRRWTG
                     VAQPNAVVRVVLPATGRTPTWLLAVLVGTLTLVLAGAGWRLLAKRRVPAAPGTGELID
                     AIAALDVRYAGREGETPVDEWSSYITERARIKAQLEASLAAGERSR"
     gene            complement(3123..3614)
                     /locus_tag="VGQ24_15460"
     CDS             complement(3123..3614)
                     /locus_tag="VGQ24_15460"
                     /inference="COORDINATES: protein motif:HMM:NF014618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nuclease family protein"
                     /protein_id="HEV8456296.1"
                     /translation="MIEVTVAHLGLDRTTNTPVVILREKDGSRVLPIWIGPAEASAIA
                     MELQGMKAQRPLTHDLLKQILVGLGGDLRRVVISAVKENTYFAELLIRRDDHVFQVDA
                     RPSDSIALALRMRAPIFTSDQLLDQSGVETDEPSPNPSLDADKLKDYLEKMDPQDFGK
                     FNP"
     gene            complement(3627..4970)
                     /gene="ahcY"
                     /locus_tag="VGQ24_15465"
     CDS             complement(3627..4970)
                     /gene="ahcY"
                     /locus_tag="VGQ24_15465"
                     /inference="COORDINATES: protein motif:HMM:TIGR00936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004013 - adenosylhomocysteinase activity
                     [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HEV8456297.1"
                     /translation="MPVQTATAKYDIKDLTLADEGKRRTEWSERSMPVLRQIRARFAK
                     EQPLRGLKVSACLHVTTETANLMQTLRAAGAEIALCASNPLSTQDDVAAHLVRDHGVH
                     VYAIKGEDHETYYTHIAQALAFGPQMTQDDGADLVGALHMIALNRLDDLAPPIRQWVE
                     GLSQAERKALVTAVRGSTEETTTGVIRLKAMAKEGILQFPIIAVNDSNTKHMFDNRYG
                     TGQSTLDGVVRATNLLLAGSTVVVAGYGWCGRGVASRARGAGAHVIVTEIDPLPALEA
                     RMDGFQVMTMGEAAPLGDLFITLTGNIHVIRPEHFSAMKDGAIVCNSGHFNVELDLDG
                     LARISSARRHVRDMVEEFVVKGRRIMVLGEGRLINLAAAEGHPASVMDMSFANQALAA
                     EMLAKEAGKMSKAVHRLPPSVDQEIARLKLQAMGIAIDTLTAEQVEYLASWDAGT"
     gene            complement(4979..6202)
                     /gene="metK"
                     /locus_tag="VGQ24_15470"
     CDS             complement(4979..6202)
                     /gene="metK"
                     /locus_tag="VGQ24_15470"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004083625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEV8456298.1"
                     /translation="MAGPKRHVFTSESVTEGHPDKVADQISDAVLDAILARDPAARVA
                     CETLVTTGMAVVAGEITTSTYVHIPDLVRKTVESIGYTDASYGFDGRTCAVLTTIDRQ
                     SPDIALGVDAGGTKEQGAGDQGMMFGYATNETKERMPLPIILAHRIAERLAAVRKGLN
                     GHPRIDWLRPDGKSQVSIEYEDDRPVGVRTVVVSTQHAERNGSRQLAHSTIREAVVEE
                     VVKPVLEEADLAFGRTKFLINPTGRFVIGGPHGDAGLTGRKIIVDTYGGMARHGGGAF
                     SGKDPSKVDRSAAYAARWVAKNIVDAKLARRCEVQLAYAIGVARPVSVMVQSFGTGIV
                     PDAMLEKMVAEVFDLTPRAIIDALKLKRPIYRPTASYGHFGRKPRTGQYDGMKVDFFT
                     WEQPDRVKDLLSAAR"
     gene            complement(6245..>6691)
                     /locus_tag="VGQ24_15475"
     CDS             complement(6245..>6691)
                     /locus_tag="VGQ24_15475"
                     /inference="COORDINATES: protein motif:HMM:NF014895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative PEP-binding protein"
                     /protein_id="HEV8456299.1"
                     /translation="GTNDLTQYTMAVDRGNARLASRFNPHDPSIVRQLHRVVEVGRAA
                     ELPVSVCGEMASEPLSAVLLLGLGYDRLSVSPPALPLVKWVIRTVPEESARQAASAAL
                     AAADAADVSRVLREAVGEYIDVRLLDPHSALPGRGRVASLPPGKNV"
BASE COUNT         1131 a         2230 c         2220 g         1110 t
ORIGIN      
        1 accaccagcc ccacgaaccc gatgatgccg caggtggcga cactggccgc ggtgaggaga
       61 gcggtacaga gatagaccag ccgccggatc cgatccacgt cggcgccgag atggtgagcc
      121 ggctcatcgc cgagggcgat cagatccagg gagcgggcgt gaaatagaag caacgcgagc
      181 ggaatcgtcg cataggcagt gaataccacg agtgcccgcc aggaggcagt gccgaaccca
      241 cccagcagcc acaagaaggc gttccggacg ccgggagcgt cggagaggac catgatcgcg
      301 ctcatcagcg cgcccgcaaa cgagccgacc acgacaccgg agagcagcag gacatgaggg
      361 tccagccggc gacccgacac caggctcagc cgatacacca gcgccacggc acccagtgct
      421 ccggcgaagg cggcgagcgg cactgcccag gcgcccgcgg cgcgcgatgc gatcgccatg
      481 acggcaccga gccctgctcc gctggagagt cccagcagat acggctccgc gagcggattg
      541 cggatcatcg cctggagcgc cgccccgcag atggccaggc tgccgccgac cagaaaagcc
      601 aggatcactc tcggcgcccg gagatcgcgc acgatggcgg cagctcctgc gtctgcatgc
      661 cagagcccgg cccacacctc ccgcagcggt agcgggaccg cgcccgcgct gagcccgagc
      721 gtgaggcagg cgattacggc agcgccgaga agcgccaggc gcgcactgct catcgccggg
      781 cggtctccat ccgcgccgtc agctcccgga tggccgccgg ggcacgcggg ctgggccggt
      841 tgaactccga accgctgacg cggagaaacc ggtgttcgcg gattgcccgc acgacctgcc
      901 actccggccg ggtggcgaag gacgcggcac cctcggtggt ggtgaagatg agatccgggt
      961 cccgggctgt caccgcctcg atactcacga cgccggacga tgccgccacg tccgcgaaga
     1021 ggttctcgcc tccggcccgc tccaccagct catgcaggaa gctgcctcgc ccgatggtca
     1081 tcggaggctg ttcccacacg aggaggagta ttctcggacg gggacctttg gcgggacggg
     1141 tggcggctgc gagcgccgta tcgaaggctg ctgccaccga gtccgctccg tgttgccgcc
     1201 ccgtcaaggt tcccaggatt cgagctaccc ggtcgacgtc accgagggca tcggtgttta
     1261 ccctgagcgc cgggatgccg agctcccgga gacgcccggc gaccgcggcg ttctgccccg
     1321 agttatacag gatgaccaga tcgggacgcc gagagagcac agcttcaatg ctgggcttga
     1381 tgccgtcacc caggtctgga acggccttcg cggcggaggg gtaatcgcag taactggtcc
     1441 gaccgacgag cgatgcaccg gcgccgatag cgaagagcag ctcggtactg gacgggatga
     1501 gcgatacgac ccggcgggcg ggcgcctgga gccggacggt atcgccggcg tcatcgacca
     1561 cccacgtacc gccgctaact tcgcgcgggt gctcgtgaca cccagtaccc gccaggctca
     1621 ctccgaggag cgtggacgtc aacagtgccc ggacagcgcg ctggagcgtc agggtctcgt
     1681 aaataattcc gcccatccct cgacggagga atgggcgatg agcggcggct gggccaccgg
     1741 gcaacgccac caaccctccc ccgagggctt catggtggca cgaacggaga ggtctcctgg
     1801 cttcgggact ccactcgcct tcccggtttc ccagtggctt gctgagtgga gagcctggcc
     1861 gatgatggcc aggtacccgt tacagtggcg gggccgcgcc ggtgttgcac cggcttccga
     1921 gttgccccgt tcgtgttcct tcagtttttc tgctgcggct agtttatcgg ctccgctccc
     1981 cggccgcaag ggaagcctcg agttgtgcct tgatcctggc tcgctccgtg atgtatgagc
     2041 tccactcgtc caccggtgtc tcgccttcgc ggccggcgta gcggacgtcc agcgcagcga
     2101 tcgcatcaat cagttcacca gttcccggtg cggcgggcac gcgtcgtttc gccagcagtc
     2161 gccatccggc tccggcgaga accagcgtga gcgtccccac gagcacggcc agcagccacg
     2221 tcggagtccg gccggtggcc ggtaagacaa cccgcaccac agcatttggc tgggccacac
     2281 cagtccaccg gcggaatgaa cgcccttgga gcacctggct gtcggccagc gcgacaccgc
     2341 ttccggttac ccgcacaccc gtttcctcgg ccagaacgtt gatcgccgct ccgggccgcc
     2401 cgaatggaaa ctccacggcg gttcggccgg aaggaatcag gtactgcacc gtgagctgct
     2461 tctctcccgg agcgaacggc gcgacgacaa gcatcgagtc gccccggcga gccaccgcat
     2521 cgcgagagaa gtcgctctcc gacacgtcga gcccaacggt gcccggcgga agcggcgcgc
     2581 tccaggttgg atgggtcgtg tcggaggtgg tgcgggtcag ccgagtgtca ttcctgagca
     2641 ccatcaggtc gagcacgccg cgggagccat cctcgcccgg gcgcgtgatc acgaggtgcc
     2701 gcgcctcgag cgagatcggc gtggtgctcg acgtgtcgta caccagaatc cgaatgccgg
     2761 tatccggccg ctgaggattg gtgggcaccg gctgggagaa gtactcgatg ccggcatgct
     2821 cggcgctgag caggtagaac gcgctggtgt cgggccggaa ggtgaactga aaccggcccc
     2881 gaccgtcgga ccgcgtcgag tcgattggcc cctggttatc cgaccctacc cggtggagca
     2941 ccacccgggt gccgcggacc ggagtcgcgt cggcgctcag gactcggccg gtcgtgcgga
     3001 cggtttgggc gaatagggcg ggaaagacgg gaaagacggg aaagacggca agagtggcgc
     3061 aggctgcggc attgatccga aaccactttc ccgcccttcc cgtcattccc gcccttcccg
     3121 tactacggat tgaacttccc gaagtcctgc ggatccatct tctccaggta gtccttgagc
     3181 ttgtccgcgt cgagcgaggg attcggcgat ggctcgtcgg tttcgacccc gctctgatcc
     3241 agcaactggt cgctggtgaa gatcggtgcc cgcatcctga gcgcgagcgc gatgctgtcc
     3301 gaggggcggg cgtccacctg gaagacgtgg tcgtcccggc ggatcaacag ctccgcgaaa
     3361 taggtgttct ccttgacggc actaatgacc acgcgcctga gatcgccgcc gagtccgacc
     3421 aggatctgct tgaggaggtc gtgggtgagc ggccgctgcg ccttcatgcc ctgaagctcc
     3481 atggcgatgg cgctcgcctc cgcgggaccg atccagatcg gcaggacccg tgacccgtcc
     3541 ttctcccgga gaatgacgac cggcgtgttg gtggtccgat cgagaccgag gtgcgccacc
     3601 gtgacttcga tcatcgggtc atcagctcag gtaccggcat cccagctcgc gagatactcc
     3661 acctgctccg ctgtgagtgt gtcgatggcg atgcccatgg cctgcagctt gagccgggcg
     3721 atctcctggt cgactgaggg cggcaggcgg tggaccgcct tgctcatctt gccggcctcc
     3781 ttcgccagca tttccgccgc cagcgcctgg ttcgcaaacg acatgtccat gacactcgcc
     3841 gggtgccctt cggcagcggc caagttgatc agccgaccct ctcccagcac catgatacgc
     3901 cgacccttga ccacgaactc ctcgaccatg tcgcgcacgt gtcgccgggc tgaagagatc
     3961 ctggccaggc cgtcgaggtc gagctcgacg ttgaagtggc ccgaattgca gacgatcgcg
     4021 ccatccttca tggccgagaa gtgttcgggg cggatgacgt ggatgttgcc ggttagggtg
     4081 atgaacagat cccccagcgg tgcggcctcg cccatcgtca taacctggaa gccgtccatc
     4141 ctcgcctcca gggcggggag cggatcgatc tcggtgacaa tgacgtgagc gcccgcgcct
     4201 cgggcccgac tggccacacc gcggccgcac cagccgtacc cggccaccac caccgtgctg
     4261 cccgccaaca gcaggttggt ggcgcggacc acaccatcca gcgtggactg gcccgtgccg
     4321 tagcggttgt cgaacatgtg cttggtgttc gaatcattca ccgcgatgat ggggaactgg
     4381 aggatgcctt ccttcgccat ggccttgagc cggatgacgc cggtcgtggt ctcctcggtt
     4441 gagccccgga cggcagtgac cagcgccttc cgctcggcct gcgacaagcc ctccacccat
     4501 tgccggatcg gcggggcgag gtcgtcgagg cggttgagcg cgatcatatg gagcgcgccg
     4561 acgaggtcgg cgccgtcgtc ttgcgtcatc tgcggaccga aggcgagcgc ttgggcaata
     4621 tgggtgtagt aggtctcgtg atcctcgccc ttgatggcat acacatgcac gccgtgatcc
     4681 cggaccaggt gcgccgcgac atcgtcctgg gtggagagcg gattcgaggc gcagagcgcg
     4741 atctccgccc cggccgcgcg aagcgtctgc atgagattgg ccgtctcggt ggtgacatgg
     4801 agacaggccg aaaccttgag tccccggagc ggctgctcct tggcgaaccg ggcccggatc
     4861 tgccggagca cgggcatgga cctctcggac cactcggtcc gtcgcttccc ctcgtcggcc
     4921 agggtcaggt ccttgatgtc gtacttggcg gtagcggtct gcacgggcat agggttcctc
     4981 agcgggcagc cgacagcagg tccttcacgc ggtcgggctg ctcccaggtg aaaaagtcaa
     5041 ccttcattcc atcatattgg ccggtccggg gctttctgcc gaagtgcccg tagctggctg
     5101 tcggtctgta aattggccgc ttcagcttga gtgcgtcaat aatcgctcgc ggcgtcagat
     5161 cgaagacctc ggccaccatc ttctccagca tggcgtcggg gactatgccg gtgccgaagc
     5221 tctgcaccat gaccgagacc gggcgcgcga ccccgatggc ataggccagc tgcacctcgc
     5281 agcggcgggc cagcttggca tccacgatgt tcttggccac ccaccgggcg gcataggcgg
     5341 cggagcggtc caccttcgaa ggatccttgc cactgaaagc gcccccgccg tgccgcgcca
     5401 tgcccccgta ggtgtcgacg atgattttgc gtccggtgag gccggcgtcg ccgtggggcc
     5461 cgccgataac gaaccgtccg gtgggattga tgaggaattt ggtccggccg aacgccagat
     5521 ccgcctcctc gagaaccggc ttgaccacct cttcgacgac tgcctcgcgg atagtactgt
     5581 gcgcgagctg gcgggagcca ttccgctcgg cgtgctgggt cgagaccacg acggtccgaa
     5641 cgcccaccgg tcggtcatcc tcatattcga tggatacctg tgacttgccg tccggccgaa
     5701 gccagtcgat tcgggggtgt ccgttgagcc ctttccgcac cgctgccagc cgttcggcga
     5761 tccggtgagc caggatgatc ggcagcggca tccgctcttt ggtttcgttg gtggcatagc
     5821 cgaacatcat cccctggtca ccggcgccct gttccttggt cccgccggca tctaccccca
     5881 gggcaatgtc gggagactgg cggtcgatag tggtcagcac ggcgcaggtc cggccatcga
     5941 agccatagga ggcatcggtg tacccgatcg actcgaccgt ctttcggacc agatcgggga
     6001 tgtgtacgta ggtgctggtg gtgatctctc cggccacgac ggccatgccg gtcgtgacca
     6061 acgtctcgca ggccacacgc gccgccggat ctcgcgccag gatggcatcg agcaccgcgt
     6121 cggaaatctg gtcggccacc ttgtcgggat gaccttcagt gaccgactcg gacgtgaaga
     6181 cgtgacgctt gggaccggcc atggaaagtg gtctcgtgga aggtaggcag aggggcagtg
     6241 ggacctacac gttctttccg gggggcaagc tagcgacacg tccacggcca ggcaacgccg
     6301 aatgaggatc gagcagacgg acatctatgt actctcccac ggcctcgcgc aggacgcgcg
     6361 agacgtcggc cgcgtctgcc gccgcgagcg ccgcactggc cgcttgccgg gccgattcct
     6421 ccggcaccgt ccggattacc cacttcacca gcgggagcgc cggaggggat acactcaggc
     6481 gatcgtaccc gagccccagc aggagcacgg cgctgagcgg ctcggatgcc atctcgccgc
     6541 agacgctcac cggcagttcg gcggccctcc ctacctcgac cacccgatgc agctggcgca
     6601 cgatggaggg atcgtgcggg ttgaagcgac tggcgagccg ggcatttccc cggtctaccg
     6661 ccatcgtgta ctgcgtgagg tcgttcgtgc c
//
LOCUS       DASYRV010000589        13225 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2037407, whole genome shotgun sequence.
ACCESSION   DASYRV010000589 DASYRV010000000
VERSION     DASYRV010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 13225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13225
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2037407"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..385
                     /locus_tag="VGQ24_15480"
     CDS             <1..385
                     /locus_tag="VGQ24_15480"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HEV8456300.1"
                     /translation="FGLAFAMLPYERFDAWKMAHRLALKVYDLTDRWPTQERYGVTAQ
                     IRRAALSAATNIAEGTAKRGPRELRRYLDISLGSLSEVSYLLRFSRDRGLLPLPDFET
                     LDDLRNQAGKLTWQLYSSLRQARAP"
     gene            complement(394..1893)
                     /locus_tag="VGQ24_15485"
     CDS             complement(394..1893)
                     /locus_tag="VGQ24_15485"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEV8456301.1"
                     /translation="MSVSAPASRAYSHYALGVLAIANLLSFINRNIVFALFEPIKLDL
                     SLTDTQLGWLASAYVLVFSLAALPFGVLSDLRSRRAVIAVGALLWSAFTLASGLATGF
                     GILLVCRALVGVGGAAFAGPAQSMVADYFKLRGRAMAMGILAAGITLGGVLGIWLGGR
                     LEAAYGWRTTLMVVSVPGFVLAVLTARLRDPVRRPGGLSLRAALAEAHVGVTALARQF
                     LPLLVSLVIGSVLALYFDRLYGADSQLDIAAFSLAVTTGLTLNIRTWVKRFAAAPSTG
                     PIALVRAFGERAISLATVLRTPTLVYVFLGGALISFGMNGLVGWAPTFMSRELNLSVA
                     KAAELLGSWGLVSGICGVLFGGILADWLRRYTATGRVLTISLGLLIGGPLAIWLLTVR
                     DLDLFVPVFAAAFFFLSWFNGPIAAVIFDVVPSTISATVAGAYLLFIHLVGDAVAFPL
                     VGALSDRLGLDRAILLLPSVAVLGGLVILGATRTVARDMARVDGKAVGR"
     gene            complement(1890..3065)
                     /gene="speY"
                     /locus_tag="VGQ24_15490"
     CDS             complement(1890..3065)
                     /gene="speY"
                     /locus_tag="VGQ24_15490"
                     /EC_number="2.5.1.46"
                     /inference="COORDINATES: protein motif:HMM:NF001980.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase"
                     /protein_id="HEV8456302.1"
                     /translation="MTRPSAPYLRGQRIDPKPTTGQETIAELVDNAFLAYNAGRLREG
                     CQLFTQRMLEPDVTVGMTLTGAMTPAGLGMSCLIPLMEAGFVDWVISTGANLYHDAHF
                     ALGLAMHRGSPNADDVELRDKGVVRIYDIFFDYSVLLSTDAFIREVSAREEFQRPMST
                     AEYHYLLGGYVGERERALGLSRKSVLAAAHELEVPIYTSSPGDSSIGMNVAEQALAGS
                     KLRFDVSADVNETASIVLEAKQGGGKSGVLIVGGGSPKNFMLQTEPQIQEVLGIDERG
                     HDYFLQMTDARPDTGGLSGATPAEAVSWGKIDPEQLPGTVVVYTDSSIALPLLTAYAR
                     ERRPSRPLRRLYARRQAMMDRLIREYRAALEFRDQRAEESLAHMHPGAGGTETAARR"
     gene            complement(3062..3799)
                     /locus_tag="VGQ24_15495"
     CDS             complement(3062..3799)
                     /locus_tag="VGQ24_15495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HEV8456303.1"
                     /translation="MTDSPYRTMDDNKRPTEDETLLEGPQPRGRRDKEQLLVSDPWRV
                     LRIMGEFVWGFDNLSDVRDGVSIFGSARTLPDDPHYQAAVETARLLAKAGIPVITGGG
                     PGIMEAANRGAFEAKGLSIGCNIELPFEQGSNAYLSRSLNFKFFFVRKTMFVKYATAF
                     IVFPGGYGTLDELFEALTLIQTGKVKDFPVILFGKEYWAGLVDWLTRTVAGQRKVDPK
                     DLKLFRVTDDPAEVTRIVIEARKEKQS"
     gene            3910..4170
                     /locus_tag="VGQ24_15500"
     CDS             3910..4170
                     /locus_tag="VGQ24_15500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456304.1"
                     /translation="MSRSWLSLTGRLAWRGLLNPRLGLDLLRTAWAFRRRRWWAQAPY
                     LPLPDRAYLRWRMYTAYADESAVPPLEDVVRFARWRRETMGL"
     gene            4187..5503
                     /locus_tag="VGQ24_15505"
     CDS             4187..5503
                     /locus_tag="VGQ24_15505"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEV8456305.1"
                     /translation="MNAKRVGPDAPHVLILGGGFGGLYAARGLAKAPVRVTVVDRRNH
                     HLFQPMLYQVATAALNPSDIAAPIRSVLRKQANTEVLLAEVSAIDPTERRVHFTDGWN
                     SKYDYLIVATGARHSYFGHDDWETLAPGLKSLEDAVEIRQRVLLAFERAEREADPVRR
                     HAYLTFVVVGGGPTGVETAGAVAELRRYALRRDFRHIDPGEATVLLLEGGPRLLPSYP
                     QSLSDKAKHELRRLGVEVRTETMVTDIRPGSVAAAGWTIPTQTVIWAAGNVASPILKS
                     LDTPLDHVGRAIVEPDCTIPGRPEVFVLGDAALFTHQEGGPLPGICPVAIQMGEYTAR
                     TIVGDLAGEPRRAFRYWDKGQLAVIGRGRAVADIWKLHFGGFLAWLIWTFVHIFFLIG
                     FRNRVLVMIQWAWSYLTYGRGARLIAGETPCTVPPLPPVRVSAAPS"
     gene            5500..6441
                     /gene="queG"
                     /locus_tag="VGQ24_15510"
     CDS             5500..6441
                     /gene="queG"
                     /locus_tag="VGQ24_15510"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0052693 - epoxyqueuosine reductase
                     activity [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HEV8456306.1"
                     /translation="MNLTESVKARALELGFIACGITHPGPTAHGDRLDEWLARGYAGT
                     MRYLHRQARRRKDPRLIVPEARSVVVVLDNYYTPDEDSDQAPPRIAKYARGEDYHRVT
                     WRRLLELGEFLRSHGARLSHSFADAGPVPERELAQRAGLGWIGKNTMLIRPDAGSFCF
                     IGSVFTDLSLDLDAAFELDRCGSCTRCLDACPTGAFIEPRLLDATRCISYLTIEQKGP
                     IPDELAGRFEGYAFGCDICNDVCPWNQRFAQPTSIPEFRPQGRLMGAAGDFFETMEEE
                     DFDRRYGDTPLERSGLEGMRRNFRAAFGSAFSEPKPR"
     gene            6450..6899
                     /locus_tag="VGQ24_15515"
     CDS             6450..6899
                     /locus_tag="VGQ24_15515"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEV8456307.1"
                     /translation="MDRLLRYDIWANGETLGSLRQGPPPPRSLKWMGHIVGAEHLWLA
                     RLRQQPAPLPVWPDLPVEQCAARLDELSVMWQEYLANAGPRRFAERVTYTNSKGEEWT
                     NVVEDILTHVTIHSAYHRGQIASDLRAAGQIPAYTDFIHAVRQGFIA"
     gene            6896..7117
                     /locus_tag="VGQ24_15520"
     CDS             6896..7117
                     /locus_tag="VGQ24_15520"
                     /inference="COORDINATES: protein motif:HMM:NF022596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2905 domain-containing protein"
                     /protein_id="HEV8456308.1"
                     /translation="MTSHPAGLALVLVGLAIAVIGLLVWWGGFGWFGRLPGDIRIERE
                     TMRIYIPLASMLVISIVLSLLLSLIRRFF"
     gene            complement(7114..8667)
                     /locus_tag="VGQ24_15525"
     CDS             complement(7114..8667)
                     /locus_tag="VGQ24_15525"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HEV8456309.1"
                     /translation="MIRNEVDLEVNVKEQSPSRPEETLDPAGPAEWDQFRALAHRMVD
                     DMLDHLSTLADQPAWRPVPDAVRTALQEKAPHHGAGAEAAYRDFLELVRPYPNGNLHP
                     RYWGWVQGNGTPLGMMADMLAAGLNPHLAGFNQAPTLVEHQVIGWLAEIMGFPGDSSG
                     LMVTGGSMANILGVAVARYAILTRAGFDIREHGLQPGPGQQQPPRLLCYGSTETHGWA
                     RKAVEFLGIGNAAFRRIAVDSGYRMDLAALRRAVQEDRSAGGLPCCVIATAATVNTGA
                     IDDLNAIADFCQAEGIWLHIDGAFGALLRLSATLRPLVSGIERADSLAFDLHKWGYLP
                     FECASVLVRDPELHRAAFATSAIYLGETARGVIAGGLPFAERGLDLTRGFKALKVWFS
                     FKAHGTGAFARLIEQNVRQARYLADLVEAHPDLELLAPVPLNVVCFRYAPGGLPSGEL
                     NRLNEEILIRLQESGIAVPSGTVLQGRYALRCANVNHRSRRSDFDALVDAVVRIGKEV
                     AGEVRLAKC"
     gene            8715..9221
                     /locus_tag="VGQ24_15530"
     CDS             8715..9221
                     /locus_tag="VGQ24_15530"
                     /inference="COORDINATES: protein motif:HMM:NF024822.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4112 domain-containing protein"
                     /protein_id="HEV8456310.1"
                     /translation="MSDPAVTRRAEATVGTFMPRELDRLRTLSRLLDSAFVIPGTRYR
                     IGLDGIIGLVPGIGDAIGAIFSIYIIFQAARLGVPKFTLARMIGNVGVDTIVGEIPLL
                     GDLFDIGFKSNIRNLSLIEQHVQRPAAARAQSRRVLLVLGIGLLALLVGIVALSVVVA
                     QLVLDSIR"
     gene            9233..9637
                     /locus_tag="VGQ24_15535"
     CDS             9233..9637
                     /locus_tag="VGQ24_15535"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEV8456311.1"
                     /translation="MVPTLYSVAIFVHDIGRAVEFYRDTLGLPMTKHGSFGAEFLEGD
                     THVGVHPAVHPQAKALVGRHTGITLFVPDLLHYCGVLHDRGVQFLAEPTQQSWGIMAM
                     ISDPDGNVLALWEDKMPEAQEHRPVDQADGTA"
     gene            complement(9639..10112)
                     /locus_tag="VGQ24_15540"
     CDS             complement(9639..10112)
                     /locus_tag="VGQ24_15540"
                     /inference="COORDINATES: protein motif:HMM:NF025078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4157 domain-containing protein"
                     /protein_id="HEV8456312.1"
                     /translation="MAGYRLTLEEHAALGNLGTAVDCGRVRLYRHAQGTSGLIRRIVL
                     GASRNRAIALGNHVFLPDACRSDVAVLAHELTHCGQYQAWGPLKYFTKGAIAQLRHLL
                     FRTLRIGASPYCYRFEPGKPFEAYGMEQQGQIVEDCFRGHPGAQALSPFQPGRSG"
     gene            complement(10158..11312)
                     /locus_tag="VGQ24_15545"
     CDS             complement(10158..11312)
                     /locus_tag="VGQ24_15545"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEV8456313.1"
                     /translation="MTESTSPFEPDVGAAPTDPSAGQPVEHPDIGKMGEALRDHIEIR
                     PLAITGLFVLALFYTLYFARAFFLPIVLAVLLDFLLSPLIRTLKRARIPEPFGAALVI
                     VALLGTTGVAVYGLAGPAREWGSKLPASMREAENRMQKLRRPVEQMSKTAEQVEQATR
                     MDDSKTTEVVVKGPSLSERLFGTTQTILTTAVEVIILLYFLLAAGDLFLQKLIKVLPQ
                     LRDKKKAVAIARETEASISTYLVTVTLVNLGLGLAVAAVMYVLEMPNPILWGALAAFA
                     EFIPYLGATAMVAVLTLAGLVTFEQVGHALLVPAAYLAVNLLQSQLIAPLILGRRLTL
                     NPVAIFIGLVFWWWIWGVPGAFIAVPLIATFKIFCDHIEALAPIGEFLGR"
     gene            11414..12172
                     /locus_tag="VGQ24_15550"
     CDS             11414..12172
                     /locus_tag="VGQ24_15550"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEV8456314.1"
                     /translation="MSRLWQSIVSLWAWLVLVLCILLWFPMLVVVRLFTLPFDRPGYV
                     AGYLFRRIGPVMASLNPLWRFRYSGRMPADPRRPFVVVSNHESFADILLISHLPWEMK
                     WLSKAELFRIPIMGWMMWLAGDIPVKRGFGPSAAEAIERCRRVLSRRVSVMIFPEGTR
                     SRTAELLPFKDGAFRLAIEAGVPILPLAVSGTRTALPKHDWRFGRSVAEVQVLEPVET
                     AGLTLADVPALKARVRDMIVRSRDALSGTTKELP"
     gene            complement(12169..13080)
                     /locus_tag="VGQ24_15555"
     CDS             complement(12169..13080)
                     /locus_tag="VGQ24_15555"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8456315.1"
                     /translation="MELLVLAGGFLAAAVRVATPLLFAATGETLAERSGVINLGTEGI
                     MLAGALAAALGATAWGPWAGLAAATLAGMCLAAVFALIAIGARADQIITGTAITLAAV
                     GLTGTIYRKAYGDAGAGLSLPTLSNLPVPGLSTIPVIGPGLFDQPAPTYLAVAALPFI
                     WWVLFRTRLGLQLRATGEAAAMARAAGVRTGLMRAGATIVGGGFAGLGGATLVLAQVG
                     TFAERMTAGRGYLAIAIVVLGRWHPAGVAAAALLFGGATALQFLFQALGTRAPYQVFL
                     MLPYVLTLLALAGAVGRVRAPGDLGRS"
BASE COUNT         2389 a         4388 c         4199 g         2249 t
ORIGIN      
        1 tttcggctta gcatttgcaa tgctgcctta cgaacggttt gatgcttgga aaatggctca
       61 ccgccttgcc ctcaaagtgt atgacctgac ggatcgctgg cctacacagg agcggtacgg
      121 agtcaccgca caaatccgtc gtgctgccct ctcagcagca accaatatcg ctgaaggcac
      181 tgccaaacgc ggaccacggg agttacgccg ttacctcgac ataagtcttg gttccctatc
      241 cgaggtttcc tacctgctca ggttcagcag agatcgcgga cttctgcctc tcccggactt
      301 cgaaactctc gacgatcttc gaaaccaggc tggaaagctt acctggcaac tttattcgtc
      361 actgcgccaa gctcgagctc cctgactacc gacttaccgc cctaccgcct taccgtccac
      421 ccgcgccatg tcccgggcca ccgttcgagt agccccgagg atgaccaggc cgccgaggac
      481 agccaccgag ggcagcagga gtatggctcg gtcgagcccg agccggtccg agagcgcgcc
      541 aaccagcggg aacgcgacgg catcgccgac gagatgaatg aacagcagat aggctccggc
      601 caccgtcgca ctgatggtgg acggcaccac gtcgaagatg acggcggcta tcggcccatt
      661 gaaccaggac agaaagaaga acgcggccgc aaagaccggc acgaaaagat cgagatcccg
      721 cacggtgagc aaccagatgg ccagcggacc gccaatcagc aggccgagtg agatcgtcag
      781 gaccctgccg gtggcggtgt agcgcctgag ccagtcggcc aggatccctc cgaagagcac
      841 gccgcagatc cccgacacca ggccccagct gccgagcagc tccgcagcct tggccacgct
      901 gagattcagc tcccgggaca tgaatgtcgg cgcccaaccg accaggccgt tcatgccgaa
      961 cgagatcagg gctccgccga gaaagacata caccagggta ggcgtcctca gcaccgtcgc
     1021 cagcgagatc gcccgctcgc caaaggcgcg gaccagcgca atcggcccgg tcgaaggagc
     1081 ggcggcaaag cgcttaaccc aagtcctgat gttcagggtg agcccggtgg tgacggcgag
     1141 cgaaaacgcc gcgatatcga gctgcgagtc ggccccatag agtcgatcga agtagagcgc
     1201 cagcacgctc ccgatgacga ggctcaccag cagggggaga aactgacggg cgagggcggt
     1261 gacaccgaca tgagcttcag ccagcgccgc acgaagggaa agcccaccgg ggcggcgtac
     1321 cggatcgcgc agccgtgccg tgagcaccgc cagcacgaag cccgggacgc tgacgaccat
     1381 gagagtggtc cgccaaccat acgcagcctc cagccgcccg cccagccata tcccgaggac
     1441 cccgccgagc gtgatgccgg ccgcaagaat tcccatcgcc attgctctac cgcggagctt
     1501 gaagtagtcc gccaccatcg actgggccgg acccgcaaac gcagcgccgc ccacgccaac
     1561 gagagcgcgg cagaccagca ggatgccgaa gccggtggcg agcccgctgg ccagggtgaa
     1621 tgcgctccac agcaatgccc ccaccgcaat gaccgcccgg cgggagcgaa ggtcgctgag
     1681 aactccgaag ggaagtgcgg cgagcgagaa gaccagaacg tacgcggagg ccagccagcc
     1741 gagctgggta tcggtgagcg acaaatcgag cttgataggc tcgaataagg caaaaacgat
     1801 attgcggttg atgaagctca gcaggttggc gatggcgagc acgcccagcg catagtggct
     1861 ataggcgcgg gacgccggcg cggatacgct caccggcggg cggccgtctc cgttccgccg
     1921 gcgccgggat gcatgtgcgc cagcgattct tcggcccgtt gatcgcgaaa ctcgagcgca
     1981 gcgcggtact cccggatcag ccggtccatc atggcctggc gccgtgcgta cagacgcctc
     2041 agcggacgtg atgggcggcg ctccctggcg tacgccgtca gcagcgggag agcgatggag
     2101 ctatcggtgt agaccaccac cgtgcccggc aactgctccg gatcgatctt cccccaactc
     2161 accgcctccg ccggcgtagc acccgacaag cccccggtgt cgggacgcgc gtcggtcatc
     2221 tggaggaagt agtcgtggcc tcgctcgtcg atgcccagca cctcctggat ctgcggctcg
     2281 gtctgcagca tgaagttctt ggggctgcca ccgcccacga tcagcacccc gctcttgccc
     2341 ccaccctgct tggcctcgag tacgatgctc gccgtctcgt tgacgtcggc gctgacatcg
     2401 aacctgagct tgctcccggc gagtgcctgc tcggcgacgt tcatgccgat cgagctgtcg
     2461 cccggcgagc tggtgtagat cggcacctcc agctcgtgcg ccgcggcgag gaccgacttc
     2521 cgcgagaggc cgagcgcgcg ctcccgctct cccacgtacc cgccgagcag gtagtggtac
     2581 tcggccgtgc tcatggggcg ctgaaactcc tctcgcgccg agacctcccg gatgaaggcg
     2641 tcggtcgaga gcaggacgct gtaatcgaag aagatgtcgt agatcctgac gacgcctttg
     2701 tcacgcagct cgacgtcgtc ggcgtttgga ctcccccggt gcatcgcgag cccgagcgcg
     2761 aaatgggcat cgtgatacag gttggcgccg gtcgaaatca cccagtcgac aaacccagcc
     2821 tccatcaggg ggatgagaca gctcatcccg agcccggccg gcgtcatggc accggtgagg
     2881 gtcatgccta ccgtgacgtc cggctcgagc atgcgctggg tgaacagctg gcacccctcg
     2941 cgcaggcggc ccgcgttgta ggcgagaaag gcattgtcca ccagctccgc gatggtttcc
     3001 tggccggtgg tcggcttggg atcgatgcgc tggccgcgca agtacggagc cgagggacgg
     3061 gtcatgactg cttctctttg cgggcctcga tcacgatccg ggtgacctcg gcggggtcat
     3121 cggtcacccg gaacagcttg aggtctttcg gatcgacctt tcgctggccg gcgacggtgc
     3181 gggtgagcca gtccaccagg ccggcccagt actccttgcc gaacaggatc accggaaagt
     3241 ccttcacctt cccggtctga atcagcgtga gcgcctcgaa cagctcgtcg agcgtcccat
     3301 accctccggg gaagacgatg aaggcggtgg cgtacttcac gaacatcgtc ttgcgcacga
     3361 agaagaactt gaagttgagg ctccggctca agtaggcgtt ggagccctgt tcgaacggca
     3421 gctcgatgtt gcacccgatc gagaggccct ttgcctcgaa tgccccgcgg ttggcggcct
     3481 ccatgatccc gggtccgcct ccggtgatga ccgggatgcc ggccttggcc aggagccggg
     3541 ccgtttcgac agcggcctgg tagtgagggt cgtccgggag cgtgcgcgcc gagccgaaga
     3601 tggacactcc atcccgcacg tccgacagat tgtcgaaacc ccagacgaac tcacccatga
     3661 tccggagcac ccgccacgga tccgatacga gaagctgctc cttgtcccgc cgtccccgcg
     3721 gctgcggccc ttccaggagg gtctcgtcct cggtcgggcg cttgttgtcg tccatggtgc
     3781 gatacgggct gtcggtcacg atcgcacgct cgcgtccggc gcgctggcgc accgccgccg
     3841 aagaaggaga gtggatcctg gaatcgaggt aagagtcata gggagcggaa tataccttat
     3901 aattggcgca tgtcccgctc ctggctatcg ctgaccggtc gcctcgcatg gcgggggttg
     3961 ctgaatccgc gcctggggct cgacctgctt cggacagcgt gggcatttcg gcggaggcgg
     4021 tggtgggcgc aggctcccta tttgcccttg ccggatcgcg cctatttgcg atggcggatg
     4081 tacacggctt acgccgatga gagcgccgta ccgccactgg aggacgtggt gcgctttgcg
     4141 cggtggcgcc gggagaccat gggactctga cgctgggagg tgagtggtga atgctaagcg
     4201 ggtggggccc gacgctccgc acgtgctcat actgggggga ggcttcggcg ggctctacgc
     4261 ggcgaggggc ttggcgaagg ctcccgtgcg cgtgaccgtc gtggaccgcc gaaaccacca
     4321 tctgttccag ccaatgctgt accaggttgc caccgcagcc ctgaacccca gcgacatcgc
     4381 cgcgccgatc cgctccgtgc tccggaagca ggccaacacc gaggtgcttc tggctgaggt
     4441 ctcggccatc gatccgacgg aacgccgggt gcacttcacc gacgggtgga attcgaagta
     4501 cgactacctc atcgtggcca ccggcgcccg ccattcctac ttcgggcacg acgactggga
     4561 gacgctcgcg cccggcttga agagcctgga agatgccgtg gagatccggc agcgggtgct
     4621 cctcgccttc gagcgagccg aacgggaggc ggatccggtt cgacggcatg cctacctcac
     4681 ctttgtcgtc gttggtggcg ggcccaccgg cgtggagacg gccggtgctg tggccgagct
     4741 gcgcaggtac gcgctccgcc gcgacttccg ccacatcgat ccgggagaag ccaccgtcct
     4801 gctcctggag ggcgggccgc gcctgcttcc ctcgtacccc cagagcctca gcgacaaggc
     4861 caagcacgag ctccgccggc tgggcgtgga agttcgtacc gagaccatgg tcacggacat
     4921 tcgcccggga tcggtggcgg cggcaggctg gaccattccc acccagacgg tgatctgggc
     4981 agcgggtaac gtggcaagcc cgatcctgaa atcgctcgac accccgctcg atcacgtggg
     5041 tcgcgccatc gtggagcccg actgcaccat ccccggtcga cccgaagtct tcgtcctcgg
     5101 cgacgcggcg ctgttcaccc atcaggaagg aggtccactt cccggcattt gcccggttgc
     5161 cattcaaatg ggggaataca ctgcgcgtac catcgtgggc gatctggctg gcgagccgcg
     5221 ccgcgcattc cgctactggg acaagggtca gctcgccgtg atcggccgcg gccgggcggt
     5281 ggcggacatc tggaagctcc actttggcgg cttcctcgca tggctgatct ggacattcgt
     5341 ccacatcttc ttcctcatag gatttcgcaa ccgggtgctg gtgatgatcc agtgggcctg
     5401 gtcttacctg acctacggcc gcggcgcgcg tctcatcgcg ggcgagaccc cgtgcaccgt
     5461 tccgcctctg ccgccggtaa gggtttcagc ggcgccgtca tgaatctgac tgagtcggtc
     5521 aaggcaagag ccctcgagct cggattcatc gcgtgtggga ttacccaccc gggacctacc
     5581 gcgcacggag atcggctcga cgaatggctg gccaggggct atgccggcac gatgcgctat
     5641 ctccaccgcc aggcaagacg ccgcaaggat ccccgcctga tcgtaccaga ggctcgctca
     5701 gtcgtcgtgg tgctggacaa ctactatacg cccgacgagg attccgatca ggctccgcca
     5761 cggatcgcga agtatgcccg tggcgaggac taccatcgcg tcacctggcg ccggctcctg
     5821 gagctcggcg agttcctccg atcccacggg gccaggctga gccacagttt tgcggatgcc
     5881 ggcccggtgc ccgaacgtga gctcgcccaa cgggccggac tgggctggat cggtaagaac
     5941 accatgctga tccggcccga cgccggctcg ttctgcttca ttggatcggt gttcaccgac
     6001 ctctcgctgg atctcgacgc cgcgttcgag ctggaccgct gcggcagttg tacccgctgc
     6061 ctggatgcct gcccgaccgg cgccttcatc gagcctcgtc tgctcgatgc cactcgatgc
     6121 atctcctacc tcacgatcga gcagaagggg ccgattccgg atgagctggc cggtcgcttc
     6181 gagggctacg cgttcggctg cgacatttgc aacgacgtgt gcccctggaa tcagcgtttt
     6241 gcccagccca cgagcattcc cgagttccgt ccccagggcc ggctgatggg cgccgccggc
     6301 gatttcttcg agaccatgga ggaggaggac ttcgaccgca ggtacggaga tacgccgctc
     6361 gagcgttccg gtctcgaggg gatgcggcga aactttcgag ccgcgttcgg ctccgcgttc
     6421 tcggagccca agcctcggtg agccggcaga tggaccggct gctccggtac gacatctggg
     6481 cgaacgggga aacgctgggc tccctgcgac aagggccgcc gcctcctcgg agtctcaagt
     6541 ggatggggca tatcgtggga gccgagcacc tgtggctggc gcgactgcgg caacagccgg
     6601 ctccgcttcc ggtatggcct gacctcccgg ttgagcaatg cgcagcccgc ctggatgagc
     6661 tctccgttat gtggcaggag tatctggcga atgccggccc ccgccgattc gccgaacggg
     6721 tcacctacac caactccaag ggtgaggagt ggaccaacgt ggtcgaggac atcctgaccc
     6781 atgtgaccat ccattcggcg tatcatcgcg gtcaaatcgc gtccgatctt cgtgctgcgg
     6841 ggcagattcc ggcctatacc gacttcatcc acgcggtccg ccagggtttc atcgcatgac
     6901 gtcccatcca gcgggactgg ctctcgttct ggtaggcctg gccatcgcag tgatcgggct
     6961 gctggtatgg tggggagggt tcggctggtt tgggcgcctg cccggcgaca tccggatcga
     7021 gcgagagacg atgcggattt atatcccgct cgcgtccatg ctcgtgatct cgatagtgct
     7081 gagtctgcta ctcagcctga tccgccgctt cttctagcac ttcgccagcc gcacctcgcc
     7141 cgcgacctcc ttgccgatcc gaaccacagc gtcgaccaac gcatcgaagt cgcttcgccg
     7201 gctccggtga ttgacgttgg cgcaacggag agcgtagcgg ccctggagga cggtgccgga
     7261 gggtacagcg atgccgcttt cctggagtcg aatcaggatc tcttcattga gccggttgag
     7321 ctcgcctgag gggagcccgc ctggtgcgta gcggaaacag accacgttaa gcggcaccgg
     7381 ggcaagcagt tccaggtcgg ggtgagcctc gaccaggtcg gcgaggtagc gtgcctgccg
     7441 gacgttctgt tcgatgagac gggcaaaggc cccggtaccg tgcgccttga acgagaacca
     7501 caccttcaag gccttgaagc cacgagtgag atcgagcccc cgttcagcga atggcagacc
     7561 gcccgcaatc acaccccgag ccgtttcgcc cagataaatc gccgacgtgg cgaaggcagc
     7621 gcggtgcagc tccgggtctc gcaccagcac gctggcacac tcgaacggca ggtagcccca
     7681 tttgtgcaag tcgaacgcga gagaatctgc gcgttcgatc cccgacacca gaggccggag
     7741 ggtggctgaa agccggagca acgctccaaa cgcgccatcg atgtggagcc agatcccctc
     7801 ggcctggcag aaatccgcga tcgcattgag gtcgtcgata gctcctgtgt tcacggtagc
     7861 ggcggtagcg atcacgcagc acggcaggcc gcccgccgag cgatcttctt gcaccgctcg
     7921 ccggagcgcc gccaggtcca tgcgataccc ggaatccacc gcgatacggc gaaaggcggc
     7981 gttaccgatt cccaggaact ctacggcttt acgtgcccag ccgtgcgtct cggtagaccc
     8041 gtaacacaga agccgtggcg gttgctgctg gcccggcccc ggttgcaatc cgtgctcacg
     8101 aatgtcaaag ccggcacgcg tgagtatggc ataccgcgcc acggccacac caaggatgtt
     8161 ggccatactc ccgccggtaa ccatcagccc actcgagtcg cccggaaatc ccatgatctc
     8221 cgccagccag ccgatcacct gatgctcgac gagcgtgggg gcctgattga atccggccag
     8281 atgcgggttc aggcccgccg cgagcatgtc agccatcatg ccgagcgggg tgccgttgcc
     8341 ctggacccac ccccaatacc gtgggtggag gttcccgttg gggtagggcc gcaccagttc
     8401 gaggaaatct cggtacgcgg cttcggctcc ggctccgtga tgcggcgcct tttcctggag
     8461 cgcagtcctc accgcatccg gcacaggccg ccatgccggc tgatcggcca gggtcgagag
     8521 gtggtccagc atatcgtcca ccatgcggtg cgccagagct cggaactggt cccactcggc
     8581 tgggcccgcc gggtccagcg tctcctccgg gcgggacggc gactgctctt tcacattgac
     8641 ctccaagtcc acttcgtttc gaatcaactt cgattccgag ccacccggtt catgcggccg
     8701 aactattatt cggaatgagc gatcccgccg tcacccgaag ggccgaagcc accgtgggca
     8761 ccttcatgcc acgcgagctc gatcggctca ggaccctgag ccggctactc gacagcgcat
     8821 tcgttatccc cggaacccgc taccgcatcg gactggacgg aatcatcggg ctggtcccgg
     8881 gaatcggcga tgccataggc gccatcttct cgatctacat catcttccaa gctgcccgcc
     8941 tgggggtgcc caagttcacg cttgctcgaa tgatcgggaa cgtcggggtg gacacgattg
     9001 tcggcgagat cccgctgctg ggcgaccttt tcgacatcgg tttcaagtcg aatatcagaa
     9061 acctgtcgct gatcgagcag cacgtgcagc ggccggcggc cgccagagcc cagagccgcc
     9121 gcgtcctcct cgtgctcggc atcgggctgc tcgcgctcct ggtgggcatc gtcgcactca
     9181 gcgtcgtcgt tgctcagctc gtcctggact ccatcagatg aagtcggcgg ttatggtccc
     9241 tactctgtac agtgtcgcga tcttcgttca cgacatcggc cgggccgtcg agttctaccg
     9301 tgacaccctg ggtctcccca tgaccaagca tggatcgttc ggtgcggaat ttctggaggg
     9361 tgacacccat gtcggggtgc atcccgctgt tcatccccaa gcgaaggctc tggtcggccg
     9421 acacacaggc attacgctct ttgtgccgga cctgctgcac tactgcggcg tgctgcacga
     9481 ccggggggtc cagttcctgg ctgagccgac gcagcagtcc tggggcatca tggccatgat
     9541 ctcggacccg gacgggaacg tgctcgcatt gtgggaagac aaaatgccgg aggcccagga
     9601 gcaccgcccg gtagaccagg ccgacggaac ggcctagctc acccgcttcg gcccggttga
     9661 aacggtgaga gggcctgtgc tcccggatgc ccgcgaaagc agtcctccac gatctgaccc
     9721 tgctgctcca tcccgtacgc ctcgaatggc ttgcccggct cgaagcggta gcagtacgga
     9781 ctcgcgccga tccgcagcgt ccggaacagc aaatgacgca gctgggctat cgcgcctttg
     9841 gtgaaatact tgagcggccc ccaggcctgg tattggccgc aatgagtcag ttcgtgggca
     9901 agcaccgcga catcgctgcg acatgcgtcc ggtaagaaga cgtgatttcc cagggcgatg
     9961 gcacggttcc ggctagctcc caacacgatt cgtcggatca gacccgaggt gccctgcgca
    10021 tggcggtaga gtcgtacccg cccgcagtcg accgcggtgc ccaggtttcc cagcgcggca
    10081 tgctcttcca aagtcaggcg atagcctgcc acagtcgact cctcaaggca aacacaaaaa
    10141 caaacacgtt ttgtggttta ccggcccaga aactcaccaa taggcgcaag cgcttcgatg
    10201 tgatcgcaga agatcttgaa ggtggcgatg agcgggaccg cgatgaatgc acccggcacc
    10261 ccccagatcc accaccagaa gaccaggccg atgaagatcg cgaccgggtt cagggtcagg
    10321 cggcgaccca ggatgagcgg cgcgatgagt tgggactgga gcaggtttac cgccagatag
    10381 gcggccggca ccaagagcgc gtgccccacc tgctcgaacg tgaccagccc ggcgagagtc
    10441 aggaccgcca ccatcgcggt ggcgcccaga tacgggatga actccgcgaa cgccgcgagc
    10501 gcgccccaca agattggatt cggcatctcc agcacataca tcaccgccgc tacggcaagc
    10561 cccaggccga gattcaccag cgtgaccgtc accagatagg tggagatcga cgcttcggtc
    10621 tcgcgcgcaa tggctacggc cttcttcttg tcgcgaagct gcggcagcac cttgatcagt
    10681 ttctggagaa acagatcgcc ggcggcgagt agaaaataga gcagaatgat tacttcgacc
    10741 gcggtggtca ggatcgtctg ggtggtgccg aagagtcgct cactgaggct gggccctttg
    10801 accaccacct cggtggtctt ggagtcgtcc atcctggtag cctgctctac ctgctccgcg
    10861 gtcttgctca tctgttcgac gggccggcgc agcttctgca tccggttctc cgcttcgcgc
    10921 atgctggccg ggagcttgct tccccactcc ctggccggtc ccgcgagtcc gtacacggca
    10981 acgcccgttg tccccaggag cgccacgatg accagtgctg ccccgaacgg ctccgggatc
    11041 cgagcccgtt tgagggtcct aatcagcgga ctcagcagga agtcgagcag cacagccagg
    11101 acgattggca ggaagaacgc gcgcgcgaag tagagcgtgt agaagagagc caacacgaag
    11161 aggccggtga tggcaagcgg ccggatctcg atatgatccc gcagcgcttc ccccattttg
    11221 ccgatgtccg gatgttcgac cggctggccg gcactcgggt cggtgggtgc cgcgccgaca
    11281 tcaggctcga atggcgaggt gctctcagtc acccttgtcc ctccgtcccg cacggcagta
    11341 aggttagccg gcccctggct ccggggtcgg tacgccagtg caccggcacc ccttcagccc
    11401 ggaatagagt agtatgtcgc gcctctggca atcaatcgtc tcgctgtggg cctggctggt
    11461 gctggtcctg tgcatcctgc tctggttccc gatgctcgtg gtcgtccgcc tgttcaccct
    11521 gccgttcgac cgtcccggat acgtcgccgg atacctgttc cgccgcatcg ggccggtcat
    11581 ggccagtctc aatccgttgt ggcggttccg ttattccgga cggatgcccg ccgatcctcg
    11641 acggccgttt gtggtcgtct ccaaccacga gtcgttcgcc gacatcctgc tcatcagtca
    11701 tctgccctgg gagatgaagt ggctgtccaa agccgagctc ttccggatac cgatcatggg
    11761 atggatgatg tggctggcgg gagatatccc ggtgaagcgg ggcttcggcc cgagtgcggc
    11821 cgaagcgata gagcgctgcc gccgagtcct gagtcggcgt gtatcagtca tgattttccc
    11881 ggagggaacc cgctctcgca cggctgagct gctccccttc aaggatggcg cgttccgcct
    11941 tgcgatcgag gccggcgttc ccatcctgcc gctggcggta tcaggcaccc gcaccgccct
    12001 tcccaagcat gactggcgct tcggccgatc ggtggctgag gtgcaggtgc tcgagccagt
    12061 ggagacggcc ggactcacgc tggctgatgt acccgcactc aaggcgcgag tgcgggacat
    12121 gatcgttcgc tcgcgggatg ccctcagcgg caccacgaaa gagcttccct aggaccgacc
    12181 gaggtcgccc ggagcccgca cccgtcccac cgcacccgcc agcgcgagca gggtcagcac
    12241 gtagggcagc atgagaaaga cctggtaggg agcccgggtg ccaagcgcct gaaagagaaa
    12301 ctgaagggca gtagcgccgc cgaagagtag ggcagccgcg gccacaccgg caggatgcca
    12361 gcgccccagg accacaatgg ctattgccag gtacccacga cctgctgtca tccgctcggc
    12421 gaaggtcccg acctgtgcca gcacgagggt ggcgccgccc aggcccgcaa acccaccgcc
    12481 gacgatcgtg gctccagcac gcatcagccc ggtgcgcacc ccggctgcgc gcgccatggc
    12541 cgccgcttcg ccggtggcgc ggagttggag cccgagccgg gtccgaaaca gcacccacca
    12601 gatgaacggg agcgccgcaa ccgcgagata ggttggagcc ggttgatcga agagtcccgg
    12661 cccgatcacc gggatggtgg acaaccccgg caccggcagg ttcgaaagcg tggggagcga
    12721 gagccccgca ccagcatcgc cgtaggcttt gcgataaatc gtgcccgtca ggccaaccgc
    12781 agccagcgtg attgcggtgc ccgtgataat ctgatcggct ctcgctccga tcgcgatcag
    12841 tgcaaacacg gccgccaggc acatccccgc gagcgtagcg gccgcgagac cggcccatgg
    12901 accccatgcg gtggcaccca gcgccgcggc aagcgcgccg gccagcatga ttccctcagt
    12961 gcccaggttg atgacgccgg aacgctcggc gagcgtttca ccggtggcgg caaagaggag
    13021 tggtgtcgca acgcgcaccg cggctgcgag aaaccctccc gccaagacca gcagctccat
    13081 caggaggccc ggctcgcgac cggccgcttc cgccgcatca cccgggcgcc actccacccg
    13141 cctttcggcg ccgtggcaag caacgccacg atgatgatga ccgcctccac cacatagacc
    13201 gcaatcgcgg ggactcctgc ctccc
//
LOCUS       DASYRV010000590         5727 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3880057, whole genome shotgun sequence.
ACCESSION   DASYRV010000590 DASYRV010000000
VERSION     DASYRV010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5727
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3880057"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            110..481
                     /locus_tag="VGQ24_15560"
     CDS             110..481
                     /locus_tag="VGQ24_15560"
                     /inference="COORDINATES: protein motif:HMM:TIGR04256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEV8456316.1"
                     /translation="MGHQFEGLSAQVIGAALAVHKELGPGFLESVYHAAMRISLAHRE
                     LPFESQFPFEITFEEVLVGQGRIDIIVANEIVVELKAVDKLRDVHYAQLKPYLRATSL
                     RVGLLFNFDAPTLTIRRMVMD"
     gene            611..1039
                     /locus_tag="VGQ24_15565"
     CDS             611..1039
                     /locus_tag="VGQ24_15565"
                     /inference="COORDINATES: protein motif:HMM:NF014119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEV8456317.1"
                     /translation="MSGTRSFIPTAEWEDLRQIRGLWGERTAIGYLVSCGWDIEAHRF
                     KLGRHDIDLVARRGSMVAFVEVKTRRSVAQGCPVEAVGRRKQSTIAKVASVWCLRYGR
                     QNDEYRFDVVAVQEHGPGQCTIDHIEDAWRCQGNSRRTFG"
     gene            1174..2226
                     /gene="recA"
                     /locus_tag="VGQ24_15570"
     CDS             1174..2226
                     /gene="recA"
                     /locus_tag="VGQ24_15570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEV8456318.1"
                     /translation="MAADESRLDADRRKALGLAISQIEKQLGKGAIMRMGADSPRVKV
                     AAIPTGAINLDAATGVGGIPRGRITEIYGPESSGKTTLTLHLAANVQKMGGVAAYVDA
                     EHALDIDYAKKLGVDIENLLVSQPDTGEQALEIVEILVRSGAVDLVVIDSVAALVPKA
                     EIEGEMGESHMGLQARLMSQALRKLAGAINRSNCAVVFINQLREKIGVMFGNPETTTG
                     GKALKFYASLRLDIRRIGPVKERETVIGNHVRVKVVKNKVAPPFRQAEFDVMFDEGIS
                     HTSLLVDLAAEAGIIQKSGAWYSYGDQRIGQGRENAKLFLRDNPVLLTEVEGKVKELL
                     GMRAPVGVGAGTESDE"
     gene            2231..2863
                     /locus_tag="VGQ24_15575"
     CDS             2231..2863
                     /locus_tag="VGQ24_15575"
                     /inference="COORDINATES: protein motif:HMM:NF014668.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein RecX"
                     /protein_id="HEV8456319.1"
                     /translation="MDRSLRITAVEPDPRRPDAVRVEIDGARFGAVPLELATAEGLVV
                     GRVVDPALQERLAGAADAEAAYRTVLRALEVRSYARGDLARRMLRKGHQRQAVEAALE
                     RAAGFGLLDDAAFAQSYVQTRSARGRGPSRLVRDLLCMGVDRALVDRAIAAEWSEESD
                     KTEMPLALAKKRAAQLGELPRQTKRRRVVAYLARRGFTGRDITEMVDKVV"
     gene            3041..>5727
                     /gene="alaS"
                     /locus_tag="VGQ24_15580"
     CDS             3041..>5727
                     /gene="alaS"
                     /locus_tag="VGQ24_15580"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEV8456320.1"
                     /translation="MQSGTIRRLFSDFFVAKGHREVPSSSLVPADDPTLLFTNAGMVQ
                     FKRTFLGQEQRDYLRATSCQKCVRAGGKHNDLEQVGHTKRHHTFFEMLGNFSFGDYFK
                     REAIAYAWQFVTSPTYLGISPDRLRVTVHHSDHEARALWREISGLPDHRIYGLGDEDN
                     FWQMGDTGPCGPCTEIYVDLETAGKQGSGAVGAHRGAPLGEVIPQAEFERLAEEGRFL
                     EIWNLVFMEYDRSADGTLTPLPKPSVDTGAGLERIAAVMQGEDDNFHTDLFLPLIKRV
                     GELVGRPYDRSADERGSYRVLADHARAVSFLLADGVYPSNEGRGYVLRRILRRAVRHA
                     WLLGRREPTLAPLTTIVVREMGAIYPELRARAEYIHEVTETEEGRFLETIEGGLRRLD
                     EIFASGATAISGAEAFKLYDTFGFPIDLTQIIASERGVEVDLAGFERSLEEQRRRSRD
                     ARVTPAMGTPVIADAPAVHVAQPGRWRSVKRGKQRFVGYTRTEADTDVLAFRQQGPRV
                     ELVLRENPFYVESGGQVSDTGAITGDGWSLAIDAVHKDSKGTVVGGTFSEPFEPTSLH
                     AAVDAPRRQDIERNHSATHLVHYVLRKRLGTHVRQQGSLVEPERLRFDFSHHGPIDQA
                     TLDAIEAEVNDLLLANAPVETREMPYADALALGAMAFFSEKYGDVVRVVQMGPSIELC
                     GGTHVRSTGQIGSFRFSGQTGVAAGVRRIEAVTGGGALRAVRELEQRLMSVAEALKAQ
                     PEHVLRRVEQLLEDRQRLEARLAETLRSGAGPLVQSNVSNVAGVELTVAETTSDDRAE
                     LGRVADTFREGKRNAVMVIFSSAGRGSIHVTLTDDLVSAGRKAGDLVNQIAAVSGGKG
                     GGRPHFASAGAGDPEQLPAARAATPELVTTWLGGRAPAGT"
BASE COUNT         1030 a         1753 c         1915 g         1029 t
ORIGIN      
        1 cccgcgtttg tattgccatg ggggccatgg aatggtttca gctatcgggt aggaatggag
       61 atctttgaat cacgaaagca cgaaaacacg aaaacactcc agcggaatca tgggtcatca
      121 gtttgaaggt ctttcagcac aagtaattgg ggctgcatta gctgttcaca aggagttggg
      181 tcctggtttt ctggagtccg tctaccacgc ggccatgcgg atctctcttg ctcatcgaga
      241 attgccgttc gagtcgcaat ttccctttga gattaccttc gaagaggtac tagtgggaca
      301 ggggcgtata gacatcatcg tagcgaacga gatcgttgtc gaactgaaag cagtcgacaa
      361 actgcgtgac gttcattacg cacagttaaa gccctatctc cgagcgacga gtctccgagt
      421 tggcctgctc ttcaacttcg atgctccgac cttaacgatc agacggatgg tgatggacta
      481 agcgcttctt cgtgctttcg tgctttcgtg ttttcgtgtt tgtctttttc ttgaccatag
      541 atcgcggttt cccgccccgc tccgcagcac cccgatgtca ctggctcgga gatcagcgct
      601 atcatgcgcc atgtccggca cccgcagctt tattcccacg gccgagtggg aagacttgag
      661 gcagatccgt ggtctctggg gcgagcggac cgccattggc tatctggtat cgtgcgggtg
      721 ggacatcgag gctcatcgct tcaagctggg acgccacgat atcgatctcg tcgcacggcg
      781 gggcagtatg gtcgccttcg tggaggtcaa gacgagacga tcggtggccc agggctgtcc
      841 ggtcgaggcg gtgggacggc ggaaacaatc caccatcgcc aaggtagcct cggtgtggtg
      901 tctcaggtac ggccggcaga atgatgaata ccgtttcgac gtggtggcag tgcaggagca
      961 cgggccggga cagtgcacca tcgatcacat cgaggatgcg tggcggtgtc aggggaactc
     1021 ccggcgaaca ttcggctagt cgagcggctg atcattgacc tgtgactcaa aatcagccac
     1081 tcagagagtc ttgcttcggc aagttttcgg tattaccttg gtgctcgcct cctactgtgt
     1141 atcgaaatcg gtcacttttt caccgaggaa acaatggctg ctgacgaatc ccggctcgac
     1201 gccgaccgcc ggaaggcgct cggactggcc atctcccaga tcgagaagca gctcggcaag
     1261 ggagccatca tgcgaatggg cgccgattcg ccccgggtga aggtggccgc catccctacc
     1321 ggcgccatca atctggacgc ggctaccgga gtggggggca taccccgtgg ccgcatcacc
     1381 gagatctacg gtccggagtc gtcaggcaag acgacgctca ccctccacct ggcggccaac
     1441 gttcagaaga tgggcggcgt cgccgcctat gtggacgcgg agcacgctct cgatatcgac
     1501 tacgccaaga agctcggcgt agacatcgaa aaccttctcg tctcgcagcc cgacaccggc
     1561 gagcaggcgc tggagatcgt cgagatcctg gtgcgctccg gtgcggtgga tctcgtggtc
     1621 atcgactcgg tcgcggccct ggtgcccaag gccgagatcg agggcgagat gggcgagagc
     1681 catatggggc ttcaggcccg gctgatgagc caggcgctcc gaaagctcgc cggcgccatc
     1741 aaccggtcca actgtgccgt ggtgttcatc aatcaactgc gggagaagat cggcgtcatg
     1801 ttcggcaacc cggagaccac caccggcggc aaggcgctca agttctacgc ttcgctccgg
     1861 ctcgatatcc gccggatcgg tccggtcaag gaacgcgaga cggtcatcgg caaccacgtc
     1921 cgggtcaagg tggtcaaaaa caaggtggcg cccccgttcc ggcaggccga gttcgacgtc
     1981 atgttcgacg aaggaatcag ccacacctca ttgctggtcg atttggccgc ggaggcgggc
     2041 atcatccaga agtccggcgc ctggtactcc tacggcgacc agcgaatcgg ccaagggcgc
     2101 gaaaacgcca agctcttcct gcgcgacaat ccggtgctcc tgaccgaggt cgaaggaaag
     2161 gtcaaggagc tcctcggcat gcgcgctcct gtcggtgtcg gggcagggac agagtcggac
     2221 gagtaagccg gtggaccgct ctctccggat taccgcggtc gagcccgatc cccggcgccc
     2281 ggacgccgtc cgggtggaga tcgacggcgc ccgcttcggc gcagttcccc tcgagctggc
     2341 cactgccgag ggattggtgg tgggccgggt agtggatccg gccctccagg agcggctcgc
     2401 cggcgcagcg gatgcggagg ccgcgtatcg gaccgtgctt cgcgccctcg aggtccggtc
     2461 ctacgcccgg ggggaccttg cccggcgcat gcttcgcaag ggtcaccagc ggcaggctgt
     2521 tgaggctgca ttggaaaggg ctgccgggtt cggcctgctg gacgacgcgg cctttgccca
     2581 gagttatgtg cagacccgat cggcccgtgg gcgaggtccc tcgcggctgg tccgtgatct
     2641 gctctgcatg ggtgtagacc gagccctggt tgaccgcgct attgccgcgg agtggtccga
     2701 ggaaagcgac aaaaccgaaa tgcccctggc gctggccaag aagcgggcgg cgcagctggg
     2761 cgagctccca cggcaaacta agcgacgccg agtcgtggcc tatctggcgc ggcgcgggtt
     2821 caccgggagg gatattacgg agatggttga taaagtcgta tagtcacgag tcacgagtcg
     2881 cgactcagat tagttgcagt acatccaacg gattcgccga gccattactg gcccggatga
     2941 gccggtcctt cacgtcagga caggctgttg taggcccggt gactcctgac tcgcgactcg
     3001 cgactcgccc gtaagtcaca gcccgcctat attttcctcc atgcaatccg gcacaatccg
     3061 ccgtctgttt agcgacttct ttgtcgccaa ggggcaccgt gaggtgcctt cttcgtcatt
     3121 ggtgcccgcc gacgatccta ccctcctgtt caccaacgcg ggcatggtgc agttcaagcg
     3181 cacctttctg ggacaggagc agcgcgacta tctgcgcgcc accagctgtc agaagtgcgt
     3241 tcgggcaggc ggcaagcaca acgacctcga acaggtgggc cacaccaaac ggcaccacac
     3301 cttcttcgag atgctgggca atttctcctt cggcgactac ttcaagcgcg aagcgatcgc
     3361 gtacgcctgg caattcgtca ccagcccgac gtacctcggc atctcgcctg atcggttgcg
     3421 ggtcacggtt caccacagcg accatgaggc acgggcgttg tggcgggaga tctcgggact
     3481 gcctgaccat cggatctacg gtctgggcga cgaggacaat ttctggcaga tgggcgacac
     3541 ggggccttgc gggccgtgca cggagatcta tgtggatctg gagacggcgg ggaagcaggg
     3601 aagcggggca gtaggggcgc accgtggtgc gcccttgggc gaggtcatcc ctcaggccga
     3661 gtttgagcgc cttgccgaag agggtcggtt cctcgagatc tggaatctcg ttttcatgga
     3721 gtatgatcgc tccgccgacg gaaccctgac cccgctgccg aagccgtcgg tggacaccgg
     3781 cgccggcctc gagcgcatcg cggcggtcat gcagggcgag gacgacaact tccacaccga
     3841 tctctttctc cccttgatca agcgggtggg tgagctggtg ggccgaccct acgaccggag
     3901 cgcggacgag cggggctcct accgggttct ggcggaccac gcccgagcgg tcagcttctt
     3961 gttggccgac ggcgtctatc cgagcaatga aggacggggc tacgtgctgc gccggattct
     4021 ccggcgcgcg gtgcgccacg cctggctgct cggacggcgg gagccgacgc tggcgccgct
     4081 caccaccatc gtggtccggg agatgggggc gatctatccc gagctccgcg cccgcgccga
     4141 gtacatccat gaggtcaccg agacggagga aggccgtttt ctcgagacca tcgaaggcgg
     4201 actccggcgc ctcgacgaga tcttcgcgtc cggggccacc gcgatctccg gagccgaggc
     4261 attcaagctg tacgacacct tcggattccc catcgacctc acgcagatca tcgccagcga
     4321 gcgcggggtg gaagtggatc tggcgggatt cgagcgatcg ctcgaggagc aacgccggcg
     4381 gtcacgagac gctcgagtga ctccggccat gggaacaccc gtgatcgctg atgcgcccgc
     4441 ggtacacgtc gcccagccgg ggcggtggcg cagcgtgaag cggggcaagc agcgcttcgt
     4501 gggctatact cgcaccgaag ccgacacgga cgtgctggcg ttccggcagc agggtccccg
     4561 agtcgagttg gtactgcggg aaaacccgtt ctacgtggag tcgggcggcc aggtcagcga
     4621 caccggtgcg atcaccgggg acggttggtc gttggccatc gacgccgtgc acaaggattc
     4681 caaaggcacg gtggtcggcg ggacattttc ggagccattc gagcccacat cgctgcacgc
     4741 ggcggtagac gcgccccgcc gtcaggacat cgagcggaac cacagtgcta cgcacctggt
     4801 gcactacgtg cttcgcaagc ggctggggac ccacgtgcgt cagcaggggt cgctggtcga
     4861 gccggagcgc ctccgcttcg acttctccca ccatggaccc atcgaccagg ccacgctgga
     4921 tgccatcgag gcggaggtga acgatcttct tctggccaac gccccggtgg aaacccggga
     4981 gatgccttat gccgatgcgc tcgcgcttgg ggccatggcc ttcttctccg agaagtacgg
     5041 cgatgtcgtc agggtggtac agatgggccc ctcgatcgag ctgtgcgggg gcactcatgt
     5101 ccgaagcacc gggcagatcg gcagcttccg gttttcgggc cagaccggcg tggcggcagg
     5161 ggtccgccgg atcgaggcgg tcaccggggg cggggctctc cgcgcggtgc gcgagctgga
     5221 gcagcgcctg atgtcggtgg ccgaggcgct gaaggcacag ccggagcacg tcctgcgtcg
     5281 ggtggagcag ctgctggagg atcgtcagcg cctcgaggct cggctggccg aaacgctccg
     5341 cagcggcgcc ggcccgctcg tgcagagcaa cgtctcgaat gtcgccggtg tcgagctcac
     5401 cgtggcggaa acgacttcgg acgaccgagc cgagctgggc cgggtcgccg acacgttccg
     5461 cgaggggaag cgcaacgcgg tcatggtgat cttcagctcg gcgggccgcg gctcgattca
     5521 cgtcaccctg accgacgacc tggtaagcgc agggcgaaag gcgggagacc tggtgaacca
     5581 aatcgccgcg gtcagcggtg ggaagggtgg aggccgtccc cactttgcct cagccggagc
     5641 gggagacccg gagcagctcc cggccgctcg tgcggccact ccggagctgg tcacgacctg
     5701 gctcggtggc cgggcccccg ccgggac
//
LOCUS       DASYRV010000591         2237 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2659516, whole genome shotgun sequence.
ACCESSION   DASYRV010000591 DASYRV010000000
VERSION     DASYRV010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2237
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2659516"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            800..2122
                     /locus_tag="VGQ24_15585"
     CDS             800..2122
                     /locus_tag="VGQ24_15585"
                     /inference="COORDINATES: protein motif:HMM:NF016310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase X catalytic domain-containing protein"
                     /protein_id="HEV8456321.1"
                     /translation="MASATDTIAPGQPIQLPAMKLQLTPSDQAMIDGERGEAASLAMR
                     IVAAMASVTGAEGLIDVTSAHVDGCLYHGQASLDFAGRLVAGGARVAIPTTLNVGSVD
                     LLHPDLYRGDAESAARGRRLMELYVSMGCRPTWTCAPYQLPERPSFGQHVAWAESNAV
                     VFANSVLGARTDRYGDFIDICAAISGRAPAAGFHLDQNRAGQILFRLDGVSKSLLAQD
                     VLFPVLGHLVGSEAGTLVPVIEGLPGSVSEDQLKALGAAAASSGAVALFHAVGITPEA
                     RSVEEAFGGTEPRRVVQVTPSRLVQARDSLSTVGGDRIDAVSVGTPHFSVAEFARLTP
                     LLERAAIASGVDFFVSTSRQVLAEVESHGWLDVYHRAGVKLVVDTCTYVTPILKPSHR
                     VVMTNSAKWAYYAPGNVGVDVVFGSLEECVHSAAEGRVRRDEALWRRG"
BASE COUNT          371 a          712 c          742 g          412 t
ORIGIN      
        1 gagggttcga atccctctcc cggcacaatc cgcacgactc ttcatgactt cggaccaatg
       61 atgtgatcga gttttgcaac gtcgaggcgc cgggccactg aaatcgtcac gcgattcatc
      121 ctccgccatg agacgtcata gtcatcgcag gcgcggcaga agatatcgag aatgtccgga
      181 gatcgattgc tgaactgata gcggggataa agcccgtgcc gttgacccag ttgaggcctc
      241 ggtagccgtc agagtggatg agtccccgca gcagaggcgc agcgtgaatc ctcacgatat
      301 ccgcctgcca gggaaccagg tcgatcctgc gctcgtgttt tgggccgggg ccgtgctgcg
      361 ggaacagaca gggccagtgc ttccaatagg ctccgatttc cacacacccg agcttggcta
      421 ctcgtcccac cttcattggg aaagtcggcc tgatgtcact gatggctcga gcgcactcgt
      481 caagaatcat gggctaacgc aagtccatcg ttatgcgaag cccgatatac ccgtcgggga
      541 tgctccgaga tacagccatc tcctaagtag agaccgaaga ggtatgcgta cttgggtcca
      601 tccatggtcg acccagcgca tgttggacag tcgggatccg gctctctctt ctgagccctc
      661 gttcgatcct ggacccgcca gtcccgaacg gtcctcctcg gaatctgcgt gaggcgcgaa
      721 atctggaggt ctgtcaggcg cgaccgtatg agggccatga cattttcgta ctcggccagg
      781 gttctcactc ccatgaatca tggcgtctgc caccgacacg attgccccag ggcagccgat
      841 acagttgccg gccatgaagc tccagctcac gccctccgac caggccatga tcgatgggga
      901 gcgcggagaa gcggccagcc tggccatgcg gatcgtggcg gccatggcat cggtgacggg
      961 ggcggaaggc ctcatcgatg tcacttcggc gcacgtggac ggctgcctct atcacgggca
     1021 ggcgagcctc gacttcgcgg ggcggctggt ggccggggga gctcgcgtgg ccatcccgac
     1081 gacgttgaac gtcggttcgg tcgacctgct ccaccctgac ctgtaccggg gggacgccga
     1141 gagcgccgcc cgcggccgcc ggctgatgga gctgtacgtg tccatggggt gccgccccac
     1201 ctggacctgc gccccctacc agctgcccga gcggccctcc ttcggtcagc acgtcgcctg
     1261 ggccgagtcg aacgcggtgg tgttcgccaa ctcggttctg ggagcgcgta ccgatcgtta
     1321 cggagacttc atcgacatct gcgcggccat cagcggccgg gcgcccgcgg cgggcttcca
     1381 cctcgaccag aaccgagctg ggcagatcct gttccgcctc gacggtgttt cgaaatctct
     1441 cctggcccag gacgtcctct ttccggtcct cggccatttg gtcgggagcg aggccgggac
     1501 gctggtcccg gtgatcgaag gattgccggg ctcggtctcc gaagaccagc tgaaagcgct
     1561 gggagcggcg gccgcgtcat ccggggcggt ggcgctgttc cacgccgtgg gaatcacacc
     1621 ggaggcccgc tcggtggaag aagccttcgg cggaaccgag cccaggcggg tggtccaagt
     1681 gacgccgtcg cggctggtgc aggctcggga ttcactttcc accgtcggtg gagatcgcat
     1741 cgacgcggtc agcgtcggga ccccccactt ctcggtggca gaattcgcca ggctgacacc
     1801 cctgctggag cgcgcggcca tcgcttcagg tgtggacttc ttcgtgtcga ccagccgcca
     1861 ggtcctggcc gaggtcgagt cgcacggctg gctcgacgtc tatcaccggg ccggggtgaa
     1921 gctggtcgtg gacacgtgca cgtacgtcac cccgatcctg aagccttcgc atcgggtggt
     1981 gatgaccaat tcggcgaaat gggcgtatta cgcgccgggc aacgtcggcg tcgacgtggt
     2041 cttcggcagc ctcgaggagt gcgtccactc ggccgctgag gggagggttc ggcgtgacga
     2101 agcgctctgg cgacgcggct gaagggcgca ctttgttcgc cgggtcggct cgggggcggg
     2161 cgctccgctt ggacgagccg ctgtctctct ggggcggcat ggaccccgcc accggcaggg
     2221 tcatcgaccg ccgacat
//
LOCUS       DASYRV010000592         8533 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_785185, whole genome shotgun sequence.
ACCESSION   DASYRV010000592 DASYRV010000000
VERSION     DASYRV010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8533
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_785185"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(191..1414)
                     /locus_tag="VGQ24_15590"
     CDS             complement(191..1414)
                     /locus_tag="VGQ24_15590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456322.1"
                     /translation="MTDTSVAVTTNTEPTKSAAVRLRPLFLVLALGFVLGFRLLLYVW
                     TPDRSSDFDLLYNAAARLIRGENPYPIETQWFSYPLPAVLLAVPFTTIPLGAARLIFD
                     ILVGWAFVFALWRCRGTFALLAVLSGAYLFAMLNGQTTPLMVAASLVPALGFLLAVKP
                     NTSASLWLARPSRMAVLGVSAFLLLSLVVLPSWPGDWWLALQQDNTDLVPPVFRPFGL
                     VLLLAALRWRSPEGRLLLAIAFIPQNTLPHELVSLALIPANLVEMGIYVAGSWIAVAA
                     AADQMHLSHSIGEWTAASWPATLGAVYLPMLYLVLRPVLSLGFLRRSSRSGPKIEKDR
                     RRPYRLPDHELKVDVTPNAGGGVAVKVTHRPTHLFATESGQTRELAARKAHDKLAGIV
                     AEMRRRAEKAMGKRK"
     gene            complement(1411..2427)
                     /locus_tag="VGQ24_15595"
     CDS             complement(1411..2427)
                     /locus_tag="VGQ24_15595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015352718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEV8456323.1"
                     /translation="MTATQAAPHDDVQQLERLVDAVTRLKSQVAQRIVGQEDVVDGIL
                     TAVLAGGHALLIGVPGLAKTLMVQTVAEALDLSFNRVQFTPDLMPSDITGTDIIEEDL
                     TTGKRAFRFVQGPIFANVVLADEINRTPPKTQAALLQAMQEHQVTAAGTTYRLPDPFF
                     VLATQNPIEQEGTYPLPEAQLDRFMLELRVSYPSRVEEEAIVEQTTGTSRVSLHPVLD
                     AGSVLAMQALVRRIPVSRGLIRAAVSLARMTRPGDPEAPGFIREYVEWGAGPRASQYL
                     VLGAKARAAIAGRPMADLDDVRAVASSVLRHRLVTNFAAEAADRTSEDLVRELVGGKA
                     WLGG"
     gene            2760..3008
                     /locus_tag="VGQ24_15600"
     CDS             2760..3008
                     /locus_tag="VGQ24_15600"
                     /inference="COORDINATES: protein motif:HMM:NF021073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HEV8456324.1"
                     /translation="MAPKDGNVGREMGEGYKYVSLGLSFAGGIILFMALGWGLDRLLN
                     LMPVFTITGTLVGTVLSFLVVYRKLQEEERRRREQKGR"
     gene            3005..3346
                     /locus_tag="VGQ24_15605"
     CDS             3005..3346
                     /locus_tag="VGQ24_15605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456325.1"
                     /translation="MKELGLGIALTLLVSGLLVLGWGQGALLPGLVFGLTATAIQVIA
                     VALVRPAFDGETVRLLKRWGLGMLLRVLGVALVATAVTLDRALFPPLPTAFAFLGVLV
                     PLLFMEVRLVR"
     gene            3343..4197
                     /gene="atpB"
                     /locus_tag="VGQ24_15610"
     CDS             3343..4197
                     /gene="atpB"
                     /locus_tag="VGQ24_15610"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEV8456326.1"
                     /translation="MIQAPNIGELVLHHTADAWTIDFYPFGSIHLPRWPDVHIGSLVV
                     NLSPTKHVYFLFIAAILVFLTMYVAGRMMKKQRAFEAAPRGFAGAVEAMVLFVRNDIA
                     IANIGHDGAKFAPFIMTLFFFILYSNLLGLFPWGASPTGNLAVTAALAIVVFLTVEIS
                     GMIKLGPKGYLHTIFPQIPGFEGVGGTAMSVVMAPIEILSKLVKPFALAVRLFGNMTA
                     GHFVILSLFGIIFLFGQLQGWNWLIALVTAMLVLASMMLELFVAFLQAYVFALLSSVF
                     IGLMQQEH"
     gene            4501..4695
                     /locus_tag="VGQ24_15615"
     CDS             4501..4695
                     /locus_tag="VGQ24_15615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003151167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F0 subunit C"
                     /protein_id="HEV8456327.1"
                     /translation="MGIGLAIVGAGIGLGRIGGQVAEGIARQPEAAAEIRGAGLLFAV
                     LLEGAAIIALVFALLFKLIV"
     gene            4708..5256
                     /gene="atpF"
                     /locus_tag="VGQ24_15620"
     CDS             4708..5256
                     /gene="atpF"
                     /locus_tag="VGQ24_15620"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEV8456328.1"
                     /translation="MLGLIALVQEAEGHAAGPASPFEVNFGLFFWTWLVFFALLYVLK
                     RFAWPPLVKATVDREHRIQAQLEEAERRNKEAQALLEEHQRLLEESRAKAHAIISDAK
                     SFAEKERAAAVEKTRQEQEELLARALRDIAGERDRAVEELRREAVDLSLAAASKLLGQ
                     RLDSETDRKIVQEYLAGLDTHH"
     gene            5253..5789
                     /gene="atpH"
                     /locus_tag="VGQ24_15625"
     CDS             5253..5789
                     /gene="atpH"
                     /locus_tag="VGQ24_15625"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit delta"
                     /protein_id="HEV8456329.1"
                     /translation="MRNETVARNYAEALFELGQQAGSAERYADLIDAVAAAVETTPRV
                     QAVLMSPRVPKSEKARILGAAMKDAPRDFVLFLQALVKRGRHRILREIAHEYLELLDL
                     KLERARAGVTLARKPDEKLQRTIEELLSRQLKKQVIAGYSVDPEILGGAIIRVGERVL
                     DGSLRRRMTRLRRQLLAR"
     gene            complement(6039..6491)
                     /gene="tnpA"
                     /locus_tag="VGQ24_15630"
     CDS             complement(6039..6491)
                     /gene="tnpA"
                     /locus_tag="VGQ24_15630"
                     /inference="COORDINATES: protein motif:HMM:NF033573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HEV8456330.1"
                     /translation="MADTYLSLRLHLVWATKNRRPWLDPEWRARLFACAAAVVARRSG
                     KLLCAGGARDHIHLYVEPPSTLALSELVTSIKTTTSKWIHETFPHRHGFRWQHGYGAF
                     SVTPFEDGRLRDYIQNQEHHHRDHRFDGEFLSLLDRHGITYDPAHVLD"
     gene            6669..>8533
                     /locus_tag="VGQ24_15635"
     CDS             6669..>8533
                     /locus_tag="VGQ24_15635"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HEV8456331.1"
                     /translation="MIALALLVVQQAAAPAASSTYWQQQVAYEIQARLDEPNGTLGGT
                     ERIHYTNRSPDTLTTFSLHLYLNAFRPGSRWADADSAEGRRRFNDLRDPDFAFNHVRD
                     VRIMGSPVTGTYPFAPDSTIVRFALPRPLPPGASMDVEMGWDARPSTVPRRQGRQGRR
                     FDFAQWYPKVVVYDRYGWEEHPLYPAGEFYGEFGSFVVDLDVPEDQVVGATGVPVCGD
                     PGWAGANRNRSAPVEYQRDYYGPRTPAATCDGATPGRKKIRWYAEDVHHFALSLNPEY
                     RYEGGRFGDVAIHVLYQPGDEGTWGNGTAVERTQTALTWLDRLFGKFAWPQITNVHRI
                     EGGGTEFPMMIMNGSADQGLIVHELGHNYTMGILANNEWREGWLDEGFTSFQTTWFWE
                     SLGRSTSYEQTEAGMLTLDLDNYSEPASLVSEAYRDFTSYNISIYSRGELFFHQLRYI
                     VGDATMHRIFQTFYQRWKLKHVDEAAFRAVAEEVSQRDLSSFFAQGLRTTELYDYAVG
                     RVRVGRRTGGQADGSTAGWVTHVEVVRKAEGQIPVEVAVIAERDTSVVRAEGLAQREW
                     VEVETGSKPKQVVLDPRMRTHDWNMLDNRHRLGLSLSTVTAYPPGTELYFHPYFST"
BASE COUNT         1476 a         2643 c         2881 g         1533 t
ORIGIN      
        1 gttggggacg tttatcgggg gggtgtaggg gaatctaggg tctagggtct agggcctagg
       61 gtctaggtct gattgaatcg aagaagggta taaatagaaa gcccggccga actggccggg
      121 cttcgttttt ggtcgcagtc accgcgagcg agcctgatgc gggcttgacg cctgaaggcg
      181 agggtccgtt tcatttccgt tttcccatgg ccttctctgc ccgccggcgc atctcggcga
      241 cgatcccggc caacttgtcg tgggccttcc gcgccgcgag ctcgcgagtc tgacccgact
      301 cagtggcaaa caggtgcgtc ggacggtgag tcaccttcac ggcgaccccg ccgccggcgt
      361 tcggggttac gtcgaccttg agctcgtgat caggaaggcg atatggcctt cttctgtcct
      421 tctcgatctt aggtccactc ctgctactcc gccggaggaa gcccagagac agcaccgggc
      481 ggagcaccag atacagcatt gggagataga cggcgccgag cgttgccggc cagctggccg
      541 ccgtccactc gccgatgcta tggctgagat gcatctgatc tgccgccgcg gccacggcaa
      601 tccagctccc ggctacatag atccccatct caacgagatt ggcggggatg agcgccagcg
      661 agaccagctc gtgcggcaga gtgttctggg gtatgaaggc gatggcgagc aggagccgtc
      721 cttccggtga acgccatcgg agtgcggcaa gcaacaagac gagaccgaag ggacggaata
      781 ctggggggac caagtctgtg ttgtcctgct gcaatgccag ccaccaatcc ccaggccagg
      841 atggcagaac cacaaggcta aggagcagga aggcgctcac tcccaggacg gccatccgtg
      901 agggccgcgc aagccaaagg gaggccgagg tgttgggctt cacagctagg agaaagccga
      961 gcgccgggac caggcttgct gccaccatca gtggtgtggt ctgaccattc aacattgcga
     1021 agaggtaggc ccctgacagt accgccagaa gagcgaacgt gccgcggcat ctccacagcg
     1081 caaacacgaa agcccaacca accaggatat cgaagatcag gcgcgcggct cccaggggaa
     1141 ttgtcgtgaa tgggacggcg aggagcaccg ccggcagcgg gtaggaaaac cactgggtct
     1201 cgatcgggta gggattctcg ccccggatca ggcgggcagc tgcgttgtag aggaggtcga
     1261 aatcactgga ccgatcggga gtccagacat agagcaggag ccgaaacccc aacacaaacc
     1321 cgagggcgag aacaagaaaa agcggcctaa gtctgaccgc ggcggatttt gtgggctcgg
     1381 tgttggtggt caccgcaacc gatgtatcgg tcatcccccc agccaggcct ttcctccgac
     1441 cagctcccgc accagatctt cgctggtccg gtcggccgcc tcggcggcga agttggtgac
     1501 cagccggtgc cggaggaccg acgaggctac cgcgcgcaca tcgtcgagat ccgccatggg
     1561 acggcccgcg attgcggcgc gcgccttggc gccgagcacc aggtactgcg acgcgcgggg
     1621 tccggccccc cactccacgt actctctaat gaagccgggc gcctccgggt ctcctggacg
     1681 ggtcatccgc gccaggctca cggcggcccg gatcagtccg cgggacaccg ggatccggcg
     1741 aaccagcgcc tgcatcgcca ggaccgaccc ggcatcgagc accggatgca gcgagacccg
     1801 cgaggtgccg gtggtctgct cgacgatcgc ctcttcctcc acccggctgg gatagctgac
     1861 cctgagctcg agcatgaagc ggtcgagctg ggcctccggc aggggatagg tgccttcctg
     1921 ctcgatgggg ttctgggtgg ccagcacgaa gaacggatcg ggcagccggt aggtggtgcc
     1981 ggccgcggtc acctggtgct cctgcatggc ctggagcagc gcggcctggg tcttcggcgg
     2041 cgtccggttg atctcgtcgg cgagcactac gttggcgaag atggggccct gcacgaagcg
     2101 aaaggcccgc ttgccggtgg tgaggtcttc ctcgatgatg tcggtgccgg tgatgtcgct
     2161 cggcatcagg tcgggggtga actgcacccg attgaaggag aggtcgagcg cctcggccac
     2221 ggtctggacc atgagggtct tggccaggcc gggtacgccg atgaggagcg cgtgcccgcc
     2281 ggccagcacc gcggtcagga tcccgtccac cacgtcctcc tggcccacga tgcgctgcgc
     2341 cacctggctc ttgagccggg taacggcgtc gaccagccgc tcgagctgct ggacgtcgtc
     2401 gtggggcgcg gcttgggtgg ccgtcatgtg gtcggagtga aggtcatgat gttgagatta
     2461 cccgggtcgg gatgcgggcg ccagcggtgg ggtcactcat gctcgtgggc acggcctccc
     2521 ttgcagcatc aagctccgcg cgcttcacca cgaaggcacg aaggacacga agcggcatcg
     2581 ctcgctttca tcgaccaggg agatgttttg ttcaactgca caccactagg gctcgctggt
     2641 gttcctcgaa ctccggcggt gtgctgttga cgaaagaact aggccgtgct ggatggtggt
     2701 gcccaccccc actcacttcg cttgcgaaac ttttcacaag cgaatagctt agcccgcgta
     2761 tggcgcccaa ggacggaaac gtcggccggg aaatggggga gggctacaaa tacgtctctc
     2821 tggggctcag cttcgccggc gggatcatcc tcttcatggc gctcgggtgg ggtctggatc
     2881 gcctgctgaa cctgatgccg gtcttcacga tcaccggcac gctggtggga acggtgttga
     2941 gctttctggt cgtgtatcgc aagctccagg aggaggagcg ccgccggcgg gagcagaagg
     3001 gccgatgaag gagctcggtc tcggcatcgc gctcacgctg ctggtgagcg gcctgctcgt
     3061 gctgggatgg ggacagggcg ctctgctgcc cggcctggta ttcggcctga ccgccaccgc
     3121 cattcaggtt atcgcggtgg cgctggtccg gccggccttt gacggcgaga cggtccggtt
     3181 gctcaagcgc tggggcctcg gcatgctgct ccgcgtcctg ggcgtggcgc tggtggcaac
     3241 cgcggtcacc ctggatcggg ccctcttccc cccactgccc accgcgttcg ccttcctcgg
     3301 ggttctggtt ccattgctgt tcatggaggt tcgactggtc cgatgattca agcgcccaat
     3361 atcggtgaac tcgtcctgca ccacaccgcc gacgcgtgga ccatcgactt ctatcccttc
     3421 ggctcgattc acctgccccg ctggcccgac gtgcatatcg gctcgctggt ggtgaatctc
     3481 tcgccgacca agcacgtgta cttcctgttc atcgccgcga tcctggtgtt cctcaccatg
     3541 tacgtcgcgg gacgcatgat gaaaaagcaa cgggccttcg aggccgcacc gagagggttt
     3601 gccggcgcgg tggaggccat ggtgctgttc gtgcgcaacg acatcgccat cgccaacatc
     3661 gggcacgacg gggccaagtt cgctcccttc atcatgacgt tgttcttctt catcctgtac
     3721 tcgaacctgc tcggcctctt tccgtggggc gcctcgccca ccggaaacct ggcggtgacg
     3781 gcggcgctgg ccatcgtggt gtttctcacg gtcgagatca gcgggatgat caagctgggt
     3841 ccgaagggct atctccatac catcttcccc cagatcccgg ggttcgaggg tgtgggcggc
     3901 acggcaatgt cggtggtcat ggcgccgatc gagatcctca gcaagctggt gaagccgttt
     3961 gcccttgcgg tccgactctt cgggaacatg acggccgggc acttcgtgat cctctcgctc
     4021 ttcgggatca tctttctgtt cggccagctg caagggtgga actggctgat cgccctggtg
     4081 accgcgatgc tggtgcttgc gagcatgatg ctggagctgt tcgtcgcctt ccttcaggcg
     4141 tacgtgttcg cgttgctgag ctcggtgttc atcgggttga tgcagcagga gcattagtcg
     4201 gtatgccccc ctgacggcga gcgcttccgc cgccagggaa ccgtaatccg ccgaccggcg
     4261 gatgaagccc gctgtccctt cgctgcgctc agggcgagcc ctgggacacc ggcgggcacc
     4321 ggaaggagcc cgatccggga gaatcggagc ctgaccggga agcgcggatg cccatggatc
     4381 tcccgccttt gatcggagtc tgagatgttg cacatgcttg ccctgctcgc cctgcttcag
     4441 gaacccgccg gcgaggccgt cgcggtcgcg cggaacacga acgccctcct cggcgccggc
     4501 atcggcatcg ggttggccat cgtgggcgcc ggcatcggcc tgggccggat cggcggccag
     4561 gtggccgaag gcattgcccg ccagccggag gccgccgccg agatccgcgg cgccgggctg
     4621 ctctttgccg tcctgctcga gggcgcggcg atcatcgcgc tcgtgttcgc cctgctgttc
     4681 aagctcatcg tgtaacccgg attgaccatg ctgggattga ttgcgctggt ccaagaggcc
     4741 gaagggcatg ccgccggccc cgcctccccc ttcgaggtca acttcggcct gttcttctgg
     4801 acctggctgg tcttcttcgc gctgctgtac gtgctgaagc ggttcgcctg gccaccgctg
     4861 gtgaaggcga ccgtcgatcg ggagcatcgc attcaggcgc agctggaaga ggcggagcgg
     4921 cggaacaagg aagcgcaggc tttgctcgag gagcaccagc ggctcctcga ggagagccgc
     4981 gccaaggcgc acgccatcat cagcgacgcc aagagctttg ccgagaagga gcgggcggcg
     5041 gcggtggaga agacccggca ggagcaggag gagctgctgg cccgggcgct gcgagatatt
     5101 gcgggcgagc gggaccgggc ggtggaagag ctccggcgtg aagcggtaga cctgtcactg
     5161 gctgctgcct cgaagttgct cggccagcgg ctcgactcgg agaccgaccg gaagatcgtg
     5221 caggagtacc tcgccggcct ggatacccac cattgagaaa cgagacggtg gcccgcaact
     5281 acgcggaggc gctgttcgag ctgggccagc aggccggaag cgcggagcgc tacgccgatc
     5341 tgatcgacgc ggtggccgcg gcggtcgaga caacgccgcg ggtgcaggcc gtgttgatgt
     5401 cgccccgggt acccaagtcg gagaaggccc gcatcctggg cgccgcaatg aaggatgcgc
     5461 cgagggattt cgtgttgttc ctccaggcac tggtcaagcg tgggcggcat agaattctgc
     5521 gggagatcgc gcacgagtac ctggagctgc tcgacctgaa gctcgagcgg gcgcgggccg
     5581 gggtgaccct ggccagaaag ccggacgaga agctgcagcg aacgatcgag gaattgctga
     5641 gccggcagct gaagaagcag gtgattgccg gctattcggt ggacccggag atcctgggcg
     5701 gcgccatcat ccgcgtgggt gaacgggtgc tcgacggctc gctgcggcgc cgaatgacca
     5761 ggctccgccg gcaattgctg gctcggtagg gccgctggta cgttgcggga tgggtttgcg
     5821 cgtggacgcg ccggcccggc gtggtttttc attatgcgtt ttcataaggg ccacccatga
     5881 gggtggccct ctcggcatgt cggcggtcct ccggaccgcc tcggcatccg gattctcctg
     5941 cgcgatagcc agacatcgcc cgcgtcggtc cgtaggaccg atgacaccgg tagggccacc
     6001 ctcctggtgg cccttaacgc gatgccgatg ggtggccctt aatccaaaac atgggcggga
     6061 tcgtatgtga tgccatggcg atcgagcagc gacaagaatt cgccgtcgaa gcggtgatct
     6121 cggtggtgat gttcttgatt ttggatgtag tcccgtaggc ggccatcctc gaaaggggtg
     6181 acgctgaacg cgccatagcc gtgctgccat ctgaagccgt ggcggtgggg aaaggtctca
     6241 tggatccatt tcgatgtagt tgtctttatg ctggtgacca gctccgacaa tgcgagggtg
     6301 ctaggcggct ccacataaag atgaatgtgg tcccgtgctc cccccgcaca gagaagcttt
     6361 ccggaacgcc gggcgacgac cgccgcggcg cacgcgaaca gtcgagcccg ccactccgga
     6421 tccagccagg ggcggcgatt cttggtggcc cacaccagat gcaaccgtaa tgagaggtag
     6481 gtgtctgcca cgcggaatgc gggaacgagg gaacgtggga ataactcgga cggaacgctg
     6541 ttcagcttag tgattcatcg gtgagacggg aaaccacacc cgcgcggcac ggtgccaaat
     6601 tcgtcatgcg gcacctatgt ttcccgccga tgctccgcct tcccgacgcc acctaaatcg
     6661 agcctttcgt gatcgccctg gcgctcctcg tcgtccaaca ggcagcagct ccggcagctt
     6721 cgagcaccta ctggcagcag caggtagcgt acgagatcca ggcccgtctg gatgagccga
     6781 atggcacgct cggtggcacc gagcggatcc attacaccaa ccgctcgccc gacacgctga
     6841 ccaccttctc cttgcatctg tacctcaacg cgtttcggcc gggctctcgc tgggccgacg
     6901 ccgattcggc cgaggggcgc cgccgcttca acgatctgcg tgatcccgac ttcgccttca
     6961 atcatgttcg cgatgtccgg atcatgggct ccccggtcac ggggacatac ccctttgcgc
     7021 cggacagcac gatcgtgcgc tttgcgctcc cccggccgct gcccccggga gcatccatgg
     7081 acgtcgagat ggggtgggac gcccggccct cgacggtgcc ccggcggcag ggtcgccagg
     7141 gccgacgctt cgactttgcg caatggtatc ccaaggtggt ggtctacgac cgctacggct
     7201 gggaggagca tccgctctat ccggccggcg agttctatgg cgagttcggc tcgttcgtcg
     7261 tcgatctcga cgtgcccgag gaccaggtcg tgggcgccac cggtgtaccg gtatgcggcg
     7321 atcccggctg ggccggagcc aaccggaatc gatcggcccc ggtggagtac cagcgcgact
     7381 actacgggcc ccgcacgccg gctgccacct gcgatggcgc cacgcccggc cggaagaaga
     7441 ttcgctggta cgcggaggac gtgcaccact ttgccctctc gctcaacccg gagtaccgct
     7501 acgaaggtgg ccggttcggc gatgtcgcca ttcacgtgct ctatcaaccc ggcgacgaag
     7561 gaacctgggg caacggtacc gcggtcgaac gcacccagac cgcgctgacc tggctcgacc
     7621 ggctattcgg caagttcgcc tggccccaga tcaccaacgt gcatcggatc gagggcggcg
     7681 ggaccgagtt tcccatgatg atcatgaacg gatcggccga ccaggggctc atcgttcacg
     7741 agctgggcca caactacacc atgggcatcc tcgccaacaa cgaatggcgg gaggggtggc
     7801 tcgacgaggg attcaccagc tttcagacga cctggttctg ggagagtctg ggccggagca
     7861 caagctatga gcagaccgaa gccggcatgc tgacgctcga cctcgataac tactcggagc
     7921 ccgccagcct ggtgagcgag gcgtaccgcg acttcacctc ctacaacatt tcgatctaca
     7981 gccggggcga gctgttcttt caccagcttc gctacatcgt gggcgatgcg acgatgcatc
     8041 ggatcttcca gactttctac cagcgctgga agctcaagca cgtggacgag gcggccttcc
     8101 gggccgtcgc cgaggaggtg tcgcagcggg atctgtccag cttcttcgcc caggggctgc
     8161 gtaccacgga gttatatgac tatgcggtgg ggagggtgag ggtgggcagg cggacgggcg
     8221 gacaggcgga cggtagcaca gccgggtggg taacgcatgt cgaggtagtg cggaaagccg
     8281 aaggtcagat tccggtcgag gtcgccgtca tcgcggagcg ggatacgtca gtcgtgcggg
     8341 ccgaggggtt ggctcagcgg gaatgggtgg aagtcgagac cgggagcaag ccgaagcagg
     8401 tagtgctgga cccgcgaatg cggacgcatg actggaatat gctcgacaat cgtcaccggc
     8461 tcggcctcag cctttccacc gtgacggcgt atcctccggg cactgagctc tactttcacc
     8521 cctacttcag cac
//
LOCUS       DASYRV010000593        10261 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3495500, whole genome shotgun sequence.
ACCESSION   DASYRV010000593 DASYRV010000000
VERSION     DASYRV010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10261
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3495500"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..784
                     /locus_tag="VGQ24_15640"
     CDS             <1..784
                     /locus_tag="VGQ24_15640"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEV8456332.1"
                     /translation="RVIAPWPAAAGSVRRAARGLAWRYVRRLSRLVHATLAPSDFVAG
                     ELEREGVERVRRVTLGVDLDRFHPRRRAYASETRRWFGLPDGPLALFVGRFAREKELD
                     LLLTAWPMVEGRTGTRLVLIGDGPSRRRLQRRPGSERLHWLPFEQDRERLADLLAAVD
                     LYVAPCSLETFGLSALEAIASGTPILAADRGGVAETVTRSGAGAHFQSGNPGSLAETA
                     ARLLSGDLRSLGARGRLYAEAHHGWDTVLDRLFDIYRRILDR"
     gene            784..1512
                     /locus_tag="VGQ24_15645"
     CDS             784..1512
                     /locus_tag="VGQ24_15645"
                     /inference="COORDINATES: protein motif:HMM:NF021601.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2334 domain-containing protein"
                     /protein_id="HEV8456333.1"
                     /translation="MLLVSIHDVSPAQAPAVHRLWSLCTARGITPTLLVVPNWHGEWP
                     LENHPRFVEWLRARAADGAEIALHGERHDEVGLPRRLPDRWRAWGRTDSEGEFLTLDA
                     ASARERLVRGLELLRRLGLEATGFVPPAWLAREVTHDAAAAAGLAFSEDERSVRLLAM
                     SKRVRSPVVRWSARTNTRAWGSVGVAGARSLLQRRARFPRIALHPGDLEHPATARSVV
                     RTLDRWLRRHSPGSYADLQASVPT"
     gene            1509..2387
                     /locus_tag="VGQ24_15650"
     CDS             1509..2387
                     /locus_tag="VGQ24_15650"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HEV8456334.1"
                     /translation="MTPVQAHLICIALVALDLLARAWRIQWIVQGLGHRMTVKDAFVL
                     NAFGDAACALTPLRIGGEPARLAGMLRSGVPAPAAFVGISLEVLAAWPVIIVAAGWLA
                     WRYAPAWWLSAGPRLGAAAERAWPWVAAVVLVSVVVWVYARRVASPMVRHLRRPVRRA
                     MVYWRRMPTWPLLASIPLSFLNLVTRVAILPVLALTLAHPPELGPTTLGSFALLYSQL
                     VLPTPSGAGAVELGFLGGAAGDLGQHEGWLLLAWRFYTNGIGVLLGVWLAARIYGWPA
                     LRRLVQRGTEEITAGG"
     gene            complement(2371..2709)
                     /locus_tag="VGQ24_15655"
     CDS             complement(2371..2709)
                     /locus_tag="VGQ24_15655"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEV8456335.1"
                     /translation="MTNFFRSIDGVATFDGSKATKADLFLGRFLFVGLNCFEPGQSQK
                     VHVHGGSDKFYLVVSGKASMTVGDQTREVGAGTLVWAPAGVPHGVETALERTIMLVAM
                     GPPPALSRQP"
     gene            2730..4166
                     /locus_tag="VGQ24_15660"
     CDS             2730..4166
                     /locus_tag="VGQ24_15660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HEV8456336.1"
                     /translation="MTDTRIERDPLGEKTVPTTALYGIQTLRAAENFPISGLRPLPAL
                     VDAVVWIKRSAALVHKQTGRLESRLADAIVQAADEVLEGQHRDQFIVDVYQAGAGTSH
                     NMNCNEVLANRANEILGGTRGAYQPVHPNDHVNMAQSTNDVIPTAMRLATLATLPDTL
                     AALDRLAGSLLAKGKEFDRIIKSGRTHLQDATPIRLGQEFTAYGHTVARHQRKLTDAA
                     QWLRELNIGGTAVGTGINAEPEYAALMVRQLQQVSGLELRVGQDLVQLMQSMGDIATL
                     SGALRAYVLDLNKIANDIRLLASGPRTGLAEILLPPVQPGSSIMPGKVNPSIAEMVNQ
                     VCYQALGLDTTVALAAEAGQLELNVMMPVMAHNIVFALTIVGNASRVLAERCVDGIEA
                     DEAQCAYWLERSPALVTALAPKIGYAEAAKLAKEAIATGLTVKELVMKKRILDGKELD
                     EVLDLRAMTEPGVPGAKEPPPLKRSGGR"
     gene            complement(4144..4962)
                     /locus_tag="VGQ24_15665"
     CDS             complement(4144..4962)
                     /locus_tag="VGQ24_15665"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEV8456337.1"
                     /translation="MVKNPGTVRVAAVGDIHLGGKGLDPPLQILFGQVSEHADVLALC
                     GDLTDRGDPEEAKVMARALATVSVPIVAVLGNHDYECGKEAEVARILADAGVHVLDGD
                     AHEVLGIGFAGIKGFAGGFGRRALGPWGERLIKEFVREALNEALKLETALGRLRTERK
                     VALLHYSPVAGTVMGEPLEIYPYLGSSRLEEPLTRYPVDVVFHGHAHHGAPESRTMGD
                     VPVYNVSMVLLQNTFPDRPSFRVVELPLAQGADDQEAAIPEVTPLRRVTDRPSA"
     gene            5066..5866
                     /locus_tag="VGQ24_15670"
     CDS             5066..5866
                     /locus_tag="VGQ24_15670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456338.1"
                     /translation="MGLAPTQSLVETPSRLFYRDAMEVLNRANVPFLVGGAFAFIHQA
                     GIDKSTKDLDLFAKPADVQRLLEACAAAGYETDLVYSHWLAKIRSPEGFIDVIFRSGN
                     GVAVVDDDWFAHAISGQVLGVPVKIAPAEETLWSKAFVMERERYDGADVSHLILALGE
                     RLDWNRVLNRFGPHWRVLLSHLILFGFIYPTARSRVPSRVMQELLRRVAGELERPDAG
                     DPVCYGTLLSWSQYLGDVLGGTFRDARVRPYGNMSAEEVARWTSADKS"
     gene            5934..6392
                     /locus_tag="VGQ24_15675"
     CDS             5934..6392
                     /locus_tag="VGQ24_15675"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEV8456339.1"
                     /translation="MRVTTWTEYSLIISIHLAKRGRKGGGPVAARELADTERLPADYV
                     EQILLRLRRAGLVQSVRGAKGGYYLAKEPAAVSVRDVMAASEHQTFEINCATHPVDAD
                     RCNPGNTCSIRPVWYALQQRVDELLASISLADLMKQESDVQELVGISSAS"
     gene            6459..7382
                     /locus_tag="VGQ24_15680"
     CDS             6459..7382
                     /locus_tag="VGQ24_15680"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent cysteine synthase family protein"
                     /protein_id="HEV8456340.1"
                     /translation="MAVVSKSLKGEPELWQAVGNTPLLPLELAPGHGRIYLKAEWLNP
                     GGSVKDRAARAILRDGLCRGELPGKRLLDASSGNTGIAYAMLAAAAGIGVTICLPANA
                     SPERRALLEIYGAEVLLTDRLEGTDGAVERAREIATDAPERFYYADQYSNPANTQAHR
                     ETTGPEIWVQTQGRLTHFVAAMGTTGTMMGTGGFLREKKPGVKLVGVQPDSPLHGLEG
                     LKHLATTPNPPALYDPALPDTVAEIPTETADRTARWLAREAGYLVGWSAGAAVAAALD
                     IVRHDPQAVAVVIGCDTGARYLSDPHRWAVT"
     gene            7379..7804
                     /locus_tag="VGQ24_15685"
     CDS             7379..7804
                     /locus_tag="VGQ24_15685"
                     /inference="COORDINATES: protein motif:HMM:NF025819.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M67 family metallopeptidase"
                     /protein_id="HEV8456341.1"
                     /translation="MTLRLSDAMAEEIRHHGELAYPAECCGVLAGRAGETKDVVRLVP
                     MSNRRTDDPHRYLIAPDDVRKTISDLRGSELEVLGYYHSHPDHPAAPSAFDTEHAWPW
                     YSYVIVRVDRGRAGELASWVLEDDRSAMSRESLEVFSEV"
     gene            7810..8070
                     /locus_tag="VGQ24_15690"
                     /pseudo
     CDS             7810..8070
                     /locus_tag="VGQ24_15690"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
     gene            8092..9240
                     /gene="moeB"
                     /locus_tag="VGQ24_15695"
     CDS             8092..9240
                     /gene="moeB"
                     /locus_tag="VGQ24_15695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_257790190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HEV8456342.1"
                     /translation="MQTEPQLSHAEVLRYSRHLLLPEVGIGGQRKLKAARVLTIGAGG
                     LGSPLSLYLAAAGVGTIGIVDFDAVDLTNLQRQIVHGTSTLGRPKLESAEARLTDLNP
                     NVRIEKHETRLSSHNALEILREYDIVVDGTDNFPTRYLVNDACVLLGKPNVYGSIFRF
                     EGQASLFYAKEGPCYRCLYSEPPPPGLVPSCAEGGVLGVLPGIIGSIQALETIKWIIG
                     AGDSLIGRLVLFDALKLRFRELQLRKDPACPICGDVPSIHELIDYEAFCGIGAEPSYE
                     GPEITAEELRREMDEKGTGLVLIDVREPHEWEIAHIEGAQLIPLGQLPERLGDLDGHA
                     EIVTHCHHGARSMKALGLLKGAGFNRVRSLAGGIDAWADRVEVGMARY"
     gene            complement(9372..9455)
                     /locus_tag="VGQ24_15700"
     tRNA            complement(9372..9455)
                     /locus_tag="VGQ24_15700"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9419..9421),aa:Leu,seq:cag)
     gene            9550..10035
                     /gene="smpB"
                     /locus_tag="VGQ24_15705"
     CDS             9550..10035
                     /gene="smpB"
                     /locus_tag="VGQ24_15705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEV8456343.1"
                     /translation="MSRETPSSAPRKQSVARNPKATHDYHVLETWETGIVLTGTEVKS
                     LRSGKASIKEAYARLKNGEVFLEGMNITPYAQGNRYNHDPVRTRKLLLHRREIEKLIG
                     AVEQRGLTLVPLELYFKNGRAKVALALGKGKRQHDKRETIKRRVEEREAARAVSIRGR
                     R"
     gene            10032..>10261
                     /locus_tag="VGQ24_15710"
     CDS             10032..>10261
                     /locus_tag="VGQ24_15710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456344.1"
                     /translation="MTGTLALLLALAGFGADSAPLIVTVSGARGEARLPVRADDTGAP
                     VIAAPALLSALDGSARVADGWAEVSVARQAFR"
BASE COUNT         1684 a         3367 c         3422 g         1788 t
ORIGIN      
        1 ccgggtcata gccccctggc ctgcggccgc cggatcagtt cggcgagccg cgcgtgggct
       61 ggcctggcgc tacgtccgcc gcctgagccg gctggtgcat gccaccctcg ccccctccga
      121 cttcgtcgcc ggtgagctcg agcgcgaagg agtcgagcgg gtgcggcggg tgacattagg
      181 ggtcgatctc gatcgcttcc atcctcggag gcgtgcctac gcctcggaga cccgacgctg
      241 gttcggctta cccgatgggc cgctcgcgtt gttcgtggga cggtttgccc gggaaaagga
      301 gctggacctg ctcctcaccg cttggccaat ggtcgaggga cgcaccggca cccgactggt
      361 cctcattgga gacggtccct cccgccgaag gctccagcgg cggcccggca gcgagcggtt
      421 gcactggctg ccctttgagc aggaccggga gcggctggcc gatctcctcg ccgcagtgga
      481 tctgtacgtg gctccatgct cgttggaaac gttcggcctc tcggcgctcg aagccattgc
      541 gagcggaaca cccatccttg cagccgaccg gggcggtgtt gccgagaccg tcacccgctc
      601 gggtgccggg gcacatttcc agtcgggcaa tcccgggtcg cttgcggaga ccgctgcccg
      661 actgctttcg ggcgatctga gatcgctcgg tgcacgcgga cggctctatg ccgaggctca
      721 ccacggatgg gatacggtgc ttgaccggct cttcgacatc tatcgccgga tcctggaccg
      781 gtgatgctgc tggtctcgat ccacgatgtg agcccggccc aggcccctgc cgtccatcga
      841 ctctggagcc tgtgcacagc acgtggcatc acgcccactc tcctggtggt tcccaactgg
      901 catggggagt ggccgctcga gaaccatccc cgcttcgttg aatggctgcg cgcccgagcg
      961 gcggatggtg ccgagattgc gttgcatggc gagcgccacg acgaagtcgg tctcccgcgt
     1021 cggctccccg accgatggag ggcctggggt aggaccgaca gtgaaggcga gtttctgacc
     1081 ctcgacgctg cctcggctcg cgagcgactg gtgcgcggcc tggagttgtt gcggcggctt
     1141 ggtctggagg cgaccgggtt cgtgccgccg gcatggctcg cgcgcgaggt cacgcacgac
     1201 gccgcagcgg ccgccggact cgccttcagc gaggacgagc gctccgttcg gctgctcgcg
     1261 atgtcgaaac gggtgcgctc gccagtggtt cggtggagcg cgcgcaccaa cacgcgggcc
     1321 tggggctcgg tcggcgtcgc cggtgcccgt tcgctgctcc agcgtcgcgc cagatttccc
     1381 cggatcgccc tgcatccggg cgatctcgaa catccggcaa cagcccggtc ggtggtccgg
     1441 acgctggatc gctggctgcg aaggcactca cccggcagct acgctgatct gcaggccagc
     1501 gtcccaacgt gacacccgtc caggctcatc tcatctgtat cgctcttgtc gcgcttgatc
     1561 tgcttgcccg cgcctggcgc attcagtgga tcgtgcaggg tctgggtcac cggatgacgg
     1621 taaaggacgc cttcgtcctg aatgccttcg gtgacgccgc ctgcgccctg acgcctctca
     1681 ggatcggcgg cgaaccggcg cgtctggcgg gaatgctgcg cagtggggtc ccggccccgg
     1741 cggccttcgt cggtatcagt ctcgaggtgc tggcggcctg gccggtgatc atcgtggctg
     1801 cgggctggct ggcctggcgg tacgcccccg cctggtggct gagcgcgggg ccccgactcg
     1861 gcgcggccgc ggaacgggcc tggccctggg tggcagcggt ggtgctggtg agcgtggtgg
     1921 tatgggtcta tgccaggcgg gtggcgtcgc cgatggtgcg gcatcttcgc cgccccgtgc
     1981 gccgagccat ggtctactgg cggcgtatgc cgacctggcc gttgttggcc agtatcccgc
     2041 tgagcttcct caatctggtg actcgcgtcg ccatccttcc ggtccttgcg ctcactctgg
     2101 ctcacccgcc ggagctcggt cccacgacac tcggatcgtt cgcgttgctg tacagccaac
     2161 tggtgcttcc gacgccctcc ggcgccggag ccgtggagct cggattcctg ggtggcgctg
     2221 ccggtgatct cgggcagcat gaagggtggc ttctgctggc ctggcgcttc tacaccaacg
     2281 gcatcggcgt gctgctcggc gtgtggctgg cggcgaggat ctatggctgg ccggcgctcc
     2341 gaaggctggt gcagcgcggg accgaggaga ttacggctgg cggctgaggg cgggcggcgg
     2401 tcccatcgcg accagcatga tggtccgctc cagggctgtc tcgacgccgt gcgggactcc
     2461 cgcgggggcc cagaccagcg tccctgcgcc tacctcgcgc gtctggtcgc caacggtcat
     2521 gctcgccttt cccgagacga cgagataaaa tttgtccgac ccgccgtgca cgtgaacctt
     2581 ctgtgactgc cccggctcga agcagttgag gcccacgaat agaaagcgac ccagaaagag
     2641 gtcggccttg gtcgccttgc tcccatcgaa cgtggctacc ccatcgatcg atctgaagaa
     2701 attggtcatt gatctcccaa aggcacccca tgaccgacac gcgcatcgaa cgcgacccgc
     2761 tgggcgagaa gaccgttccc accaccgcgc tctacggaat tcagacgctc cgggcggccg
     2821 agaacttccc gatctccggc cttcggccgc ttccggcatt ggtggatgcg gtggtgtgga
     2881 tcaagcgttc ggccgcgctg gtgcacaagc agaccgggcg gctcgagtcg cgactggctg
     2941 acgcgattgt ccaggcggca gacgaagtgc tcgaaggcca gcaccgggac cagttcatcg
     3001 ttgacgtgta tcaggccggc gccggcacca gccacaacat gaactgtaac gaggtgctcg
     3061 ccaaccgggc caacgagatc ctggggggta ctcgcggcgc ctaccagccg gtacatccga
     3121 acgaccacgt caacatggcc cagagcacca atgacgtgat ccccaccgcc atgcgcctgg
     3181 ccacgctcgc caccctaccg gatacactgg ctgctttgga tcggctcgcc ggctcactcc
     3241 tcgccaaggg caaggagttc gatcggatca tcaagtcggg gcgcacccat cttcaggacg
     3301 ccaccccgat ccggctgggc caggagttca ccgcctatgg acacaccgtc gctcgccacc
     3361 agcggaagct gaccgatgcg gcccagtggc tccgggagct gaatattggt ggcacggcgg
     3421 tggggaccgg gatcaacgcg gagccggaat atgcggcgct catggtccgc cagctccagc
     3481 aggtcagcgg cctggagctc agagtgggac aggacctggt tcagctgatg cagtccatgg
     3541 gcgacatcgc gacgctgagt ggtgcgttgc gggcctacgt gctggacctg aacaagatcg
     3601 ccaatgacat ccggctgctc gcgtccggcc cgcgtaccgg tctggcggag atcctgctgc
     3661 cgccggtgca acccggctcc agcatcatgc cgggaaaggt gaacccttcg attgcggaga
     3721 tggtgaacca ggtctgctat caggcactcg gcctggatac gaccgtcgcg ctcgcggccg
     3781 aagccggcca gctcgagctc aatgtgatga tgccggtcat ggctcacaat atcgtctttg
     3841 cgctcacgat cgttggtaat gcaagccggg tgctcgcaga gcgctgtgtg gatggcatcg
     3901 aggctgacga agcgcagtgc gcctactggc tggagcggag cccggctctg gtgactgcgc
     3961 tggcgccgaa gatcggatat gcggaagccg ccaagctggc caaggaagcg atcgccaccg
     4021 gcctcacggt gaaagagctc gtgatgaaga agcggatcct cgacggaaag gagctcgacg
     4081 aagtgctgga ccttcgggcc atgactgagc cgggggttcc cggagcgaag gagcctccgc
     4141 ccctcaagcg ctcgggcggt cggtaacccg acggagcggc gttacctccg gaatcgcggc
     4201 ctcctggtcg tcggcgccct gggcgagcgg gagctccacg accctgaacg acggccggtc
     4261 tggaaaggta ttttgcagca gcaccattga cacgttgtat accgggacat cccccatggt
     4321 ccggctctcc ggtgcgccat ggtgcgcgtg cccatggaag acgacgtcta ccgggtatcg
     4381 ggtcagcggc tcctccagcc ggctcgaacc caggtagggg tagatctcga ggggctctcc
     4441 cattacggtc ccggcgactg gtgagtagtg cagcagcgcc acctttcgct cggttcgtaa
     4501 tctgccgagt gccgtttcca gtttgagcgc ctcgttcagg gcctcgcgga cgaactcctt
     4561 gatgaggcgc tccccccaag gccccaaggc gcgccgccca aatcctcccg caaatccctt
     4621 gatcccggcg aagccgatcc cgagcacctc gtgggcatcg ccgtcgagga catggacgcc
     4681 ggcatcggcc aggatccggg ccacctcggc ttccttaccg cactcgtagt cgtggttgcc
     4741 gagcaccgcc acaatgggga ccgacaccgt ggccagcgcc ctggccatga ccttcgcttc
     4801 ctccgggtcg ccccggtcgg tcaggtcgcc gcagagcgcc aggacatcgg cgtgctccga
     4861 cacctgcccg aacaggatct ggagcggggg gtccagcccc ttacccccaa gatgaatgtc
     4921 gccgacggcg gcgacccgaa ccgtgcctgg gttcttgacc attgcgtccc aattcagcct
     4981 tggccgggtt ggggtgcggt gacgtgcgcc acacccctgg tgggctgtgc cgaatatgat
     5041 agtcccagcc tccaaggagt ccgccatggg tctggcaccc acacaatcgc tggtcgagac
     5101 tccatcccga ctattctatc gcgatgccat ggaggtcctc aaccgggcca acgttccatt
     5161 tctggtgggt ggggccttcg ccttcattca ccaggccggc atcgacaagt ccaccaagga
     5221 cctcgatctc tttgccaagc ccgctgacgt gcagcgcttg ctcgaggcat gcgcggcggc
     5281 cggttacgaa accgacctgg tgtactcgca ctggcttgcg aaaatccggt cgcccgaagg
     5341 cttcatcgac gtgatcttca ggtccggaaa cggcgtggcc gtggtggacg atgactggtt
     5401 cgcccacgcc atctccggcc aagtgctggg cgttccggtg aagatcgcgc cggccgagga
     5461 gacactctgg tccaaggcct tcgtgatgga gcgggagcgg tatgatgggg ccgatgtttc
     5521 ccacctgatt ctggcgctgg gtgaacggct cgactggaac cgggttctga accggttcgg
     5581 gccgcactgg cgggtactcc tcagtcatct catcctgttc ggcttcatct atcccaccgc
     5641 ccgctcccgg gtgccatccc gggttatgca ggagctgcta cgtcgtgtag cgggtgagct
     5701 ggagcggccc gatgccggcg acccggtctg ctacggcacg ctgctctcct ggtcgcagta
     5761 tctgggcgac gtgctcggcg gcacgttccg cgatgcccgg gttcgtccct acgggaacat
     5821 gagcgcggag gaagtcgccc ggtggacgtc ggcggataag agttgaaggg tcgaaagtct
     5881 ggggaccttt ccccgacatt gattcccgac tgacgccgcc ccatattccc ctcatgcggg
     5941 tcaccacctg gaccgaatac agcctgatta tttcgatcca ccttgccaag cgcggccgca
     6001 aaggcggcgg gccggtcgcg gcgcgcgagc tggccgacac ggagcgcctt cccgccgatt
     6061 atgtcgagca gatcctgctt cgcctgcggc gagccggcct ggtccagagc gtgcggggcg
     6121 ccaagggcgg ctactatctg gccaaggagc ccgccgctgt ttcggtgcgc gacgtgatgg
     6181 ccgcctcgga gcaccagacc ttcgagatca actgcgccac ccacccggtt gacgccgatc
     6241 gatgtaaccc ggggaatacc tgcagcatcc ggccggtctg gtacgcgctt cagcagcggg
     6301 tggacgagct gctcgcgagc atctccctgg ccgatctgat gaagcaggaa tcggacgtgc
     6361 aggaactggt cgggatctct tcggcaagtt agctcgcagt attcttctgg agcccgaccc
     6421 gacccaaccg gtcgggtttt ttgtttggga gacgatcaat ggcggtggtc tcgaaatcgt
     6481 tgaaggggga gccggagttg tggcaggcgg tgggaaatac cccactgctc ccactcgagc
     6541 tggcgccggg ccacggccgg atctatctca aggcggagtg gctcaatccg ggagggagcg
     6601 taaaggaccg cgccgcgcga gccatcctcc gggacggcct gtgccgcgga gagctgccag
     6661 gcaagcggct gctggacgct tccagcggaa acaccggtat cgcctacgcc atgctcgccg
     6721 cggccgcagg catcggggtg acaatctgtc tgccggccaa tgccagtccc gagcggagag
     6781 cactactgga gatctacggc gctgaggtcc tgctcaccga ccggctggag ggaaccgacg
     6841 gggctgtgga gcgggcgcgt gagatcgcga cggacgcccc ggagcgcttc tactacgccg
     6901 atcagtacag caatccggcc aatacccagg ctcaccgcga gacgaccggg cccgagattt
     6961 gggtccagac ccagggcagg ttgactcatt ttgtggcggc aatgggaacc accggaacca
     7021 tgatgggaac tggagggttc ctgagggaga agaagccagg agtgaagctg gtgggggtgc
     7081 agcccgactc gccgttgcat ggcctcgaag gcctgaagca tctggcgacg accccgaacc
     7141 cgcccgccct gtatgatccg gctttgcccg acaccgtcgc ggagatcccg accgagaccg
     7201 ccgaccgaac cgcccggtgg ctggcgcgtg aagcgggcta cctggttggc tggtcggctg
     7261 gcgcggccgt cgccgcggcg ctggacatcg ttcgccacga tccgcaggcc gtggccgtgg
     7321 tgatcgggtg cgataccggc gcccgttacc tcagcgatcc tcaccgatgg gcagtgacgt
     7381 gactttgcgc ctgagcgatg cgatggccga agagatcagg caccatggtg agctggccta
     7441 tccggcggag tgttgcgggg tactggccgg gagggcgggt gagaccaagg acgtcgtgcg
     7501 gttggtcccc atgagcaatc gtcgcaccga tgatcctcac cgctatctca tcgccccgga
     7561 cgatgtgcgc aagacgatct ccgacctgcg tgggtcggag ctcgaggtgc tcgggtacta
     7621 tcattcgcac cccgatcacc cggccgcacc gtcggcattc gataccgagc acgcctggcc
     7681 ctggtacagc tacgtcatcg tgcgggtgga ccgcggccgt gcgggcgagc tcgccagctg
     7741 ggtgctggag gacgatcgct cggccatgag ccgcgagtct ctcgaagtct tcagcgaggt
     7801 gtgactatta tgtccgtgac cgtttccatt ccgactccgc tgcggagttt caccgctggc
     7861 caggatagca tcgagctggc cggcgctacg gtgggccagg tcctggatgg cctcatggcc
     7921 acgcatgccg ggctcaagcg gcatctgctt caggacgacg gccgcctgcg aaacttcgtc
     7981 aacctgtatt tgaacgagac ggatatccgc catctggagt ccaccgccac accggtgcat
     8041 ccgggcgatg tgctcacgat cgtgcccagc atcgcgggcg gcgcgccggt gatccagact
     8101 gagccgcagc tctcccatgc cgaggtgctg cgctactcga gacatctcct tcttcccgag
     8161 gtcggcatcg gcggccagcg gaagctcaaa gccgcacgcg tcctcaccat cggggccggt
     8221 gggctcggct cgccgctgtc tctctacctg gccgccgccg gggtgggaac gatcggcatc
     8281 gtcgatttcg acgcggtcga tctcaccaac ctccaacgtc agatcgtgca cggcacgtcc
     8341 acgctgggcc ggcccaagct cgagtcggcc gaggcccggc tgaccgatct caacccgaac
     8401 gttcgaatcg agaagcatga aacccggctc agctcgcaca acgcgctgga gatcctccgc
     8461 gagtatgaca ttgtagtgga cgggaccgac aacttcccca cccgatacct ggtgaacgat
     8521 gcctgcgtgc tgctcgggaa acccaacgtc tacggcagca tcttccggtt cgaggggcag
     8581 gcgtcgctgt tctatgccaa ggaggggccc tgctaccgct gcctctattc ggagccaccc
     8641 ccgccgggac tggtgcccag ctgcgccgaa ggaggcgtgc tcggcgtgct gccgggcatc
     8701 atcggcagca ttcaggccct cgagaccatc aagtggatca tcggcgcggg agactctctg
     8761 attggccggc tggtgctgtt cgatgcattg aagcttcggt tccgggagct gcagcttcgg
     8821 aaggacccgg cttgcccgat ctgcggagac gtgccctcga ttcacgagct gatcgactac
     8881 gaggcgttct gcgggatcgg ggcggagcca tcctacgagg gacccgagat cacggcggaa
     8941 gagctgcggc gagagatgga cgagaagggg actggcctgg ttctgatcga cgtgcgcgag
     9001 ccgcacgagt gggagatcgc tcacatcgag ggagcccagc tgatccccct cgggcagctt
     9061 cccgaacgtc tcggtgacct cgacggccac gccgagatcg tcacccactg ccaccatggc
     9121 gcgcgctcga tgaaggcgct cgggcttctc aaaggggccg gcttcaaccg ggtgcggagc
     9181 cttgccggcg gcatcgacgc atgggccgat cgggtggaag tcgggatggc gcgatactag
     9241 acgggcagcg gggccgcagg gcagttagtg ctacgaacaa aaagccctcc gatagcgtca
     9301 cccgcttcgg agggtcaatc gtctcggagc aagccgccgc gccccccatc tgccccgctg
     9361 ccccgcttcc atgccgaagg cgggactcga acccgcacgg gcttgcgccc actgcgccct
     9421 gaacgcagcg cgtctaccag ttccaccact tcggcgaagg gcgcatacta gcggcccgaa
     9481 tcagcagggt caagccaggg cgttgacccg accgaagtgg tggcctatcc tttgcttagg
     9541 attcccgacg tgagccgcga gaccccctct tccgccccgc ggaaacagtc ggtcgcccgg
     9601 aaccccaagg cgacccacga ttaccacgtc ctcgagacct gggaaaccgg gattgtcctg
     9661 accgggaccg aggtcaagtc gctcagaagc ggcaaggcct ccatcaagga agcctatgcc
     9721 aggctaaaga acggggaagt gtttctcgaa gggatgaaca tcacacctta cgcgcaaggc
     9781 aaccgctaca accacgaccc ggtccggacc cggaaactcc tgttgcatcg ccgtgaaatc
     9841 gagaaactga tcggcgccgt cgagcagcgt ggactgaccc tcgtcccact ggagctgtac
     9901 ttcaagaatg gccgggccaa ggttgcgctc gccctgggga aggggaagag gcagcacgac
     9961 aagcgcgaaa ccattaagcg ccgggtggaa gaacgagagg cggcgcgggc ggtctcgatc
    10021 cgaggccggc gatgaccggt acgcttgccc ttctccttgc gctcgccggc ttcggtgctg
    10081 attccgctcc cctgatcgtg acagtgtccg gcgcccgcgg cgaggcccgg cttccggtgc
    10141 gcgccgatga cacgggggcg ccggtcatcg cggcacccgc gctgctctcg gcactggacg
    10201 gctcggctcg ggtggcggat ggctgggccg aggtgagcgt ggcccggcag gcattccgtt
    10261 t
//
LOCUS       DASYRV010000594         2407 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3281805, whole genome shotgun sequence.
ACCESSION   DASYRV010000594 DASYRV010000000
VERSION     DASYRV010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2407
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3281805"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(173..2002)
                     /gene="glmS"
                     /locus_tag="VGQ24_15715"
     CDS             complement(173..2002)
                     /gene="glmS"
                     /locus_tag="VGQ24_15715"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEV8456345.1"
                     /translation="MCGIVGYIGPRQAAGLLLEGLRRLEYRGYDSAGIAVVNGRGLKI
                     MKAAGKLSVLEGEMQEDMPLGTIGIGHTRWATHGAPTTTNAHPHTDQSGRIAVIHNGI
                     IENSGAIRKALEQRGHTFTSETDTEVLAHLVGELYQGNLEEAVAVALKDVDGAYGLAF
                     ISSEEPGVLVAARKGSPLLIGVGENEWFVASDASPLLQYTRSVVYLDDGEMAVLTREG
                     YRVRNLETPRISKEVNQIDWDLSQVERGGYAHFMHKEICEQAESLRNTLRGHLLEEEG
                     TARVSGLNLSDEELKQIERIIITACGTSWHSGIIGEYMLEEMARIPVEVEYASEFRYR
                     NPVVDPKTLVIGISQSGETADTLAAIREAKRRGARTIGLVNVVGSTIAREVDGGIYLH
                     AGPEIGVASTKAFTSQVAALALITLRIARLRNLSILQGREFIRALQRLPGQVSQILER
                     SSEIERLADRFLRTSRNALYLGRGVNFPVALEGALKLKEISYIHAEGYPAAEMKHGPI
                     ALIDENMPVVFIAPRDAVHSKIVSNIEEVKARGGKVIALINEGDTEIERLADATFTIP
                     VTLDLLTPILTSIPLQLLSYYVAVSRGCNVDQPRNLAKSVTVE"
     gene            complement(2014..>2407)
                     /locus_tag="VGQ24_15720"
     CDS             complement(2014..>2407)
                     /locus_tag="VGQ24_15720"
                     /inference="COORDINATES: protein motif:HMM:NF012626.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456346.1"
                     /translation="RATIGGEGNGGVMFPALHIGRDAPLGVALILHLLAATGVTLSRL
                     VAASPRYTIVKAKGPRGPKLAPLYQRLRQQFPDATADDRDGLRLAWPDRWLHVRPSGT
                     EPIVRLIAEAPTEAEAAELIAAGRELLY"
BASE COUNT          409 a          773 c          773 g          452 t
ORIGIN      
        1 ggaatgggct gctatcgctg ctggcgtact ggctgccggg atcaatcttg cagctcggcg
       61 cccggccccg agcgttgcga aagcctgatg acccaaagcc ccggccagtg tgaccggggc
      121 ttcgtgcagg tagccaagta cggtgggcgg ggcggcgtta tcaactcgcc ggctactcca
      181 ccgtcaccga cttggccagg ttccgcggct ggtcgacatt gcagcctcga cttaccgcga
      241 cgtagtacga aagcagctgc agcgggatgc tggtcaagat cggcgtgagc aggtcgaggg
      301 tcacgggaat ggtgaacgtg gcgtccgcca gccgctcgat ctcggtgtct ccctcgttga
      361 tgagcgcgat gaccttgccg ccccgtgctt tcacttcctc gatattcgat acgatcttcg
      421 agtggaccgc atcgcgcggg gcgatgaaca cgaccggcat gttctcgtcg atcagcgcaa
      481 tggggccgtg cttcatctcg gccgccggat atccttcggc gtggatatag gagatttcct
      541 tcagcttgag cgcgccttcg agggccacgg ggaaattcac gccccggccg aggtagagtg
      601 cgttcctgga ggtccggagg aagcggtcgg ccaggcgctc gatctcgctg gagcgctcga
      661 gaatctgact cacttgcccc ggaagacgct ggagcgcgcg gatgaactcg cggccctgga
      721 gaatgctgag gttccgcagc cgggcaatgc gcagagtaat caacgccaat gcggccacct
      781 gactggtgaa cgccttcgtg ctggccacgc ctatttcggg gcccgcatgg aggtaaatgc
      841 cgccgtccac ctctcgcgcg atggtcgagc ccaccacatt gacgagaccg atcgtccgtg
      901 ctccccgtcg cttggcttca cggatggcag cgagggtatc ggccgtctcg ccggactgag
      961 agatgccgat caccagggtc ttgggatcca ccaccgggtt ccgatagcgg aactccgagg
     1021 cgtactcgac ctcgacggga atccgcgcca tctcttccag catgtactca ccgatgatgc
     1081 cggagtgcca cgaggtacca catgcggtaa tgatgatccg ctcgatctgc ttcagctcct
     1141 cgtcactgag gttgagacca ctgacgcggg cggtcccttc ttcctccaag aggtgtcccc
     1201 gaagcgtgtt gcggaggctt tccgcctgct cacagatttc cttgtgcatg aaatgggcgt
     1261 agccgccccg ctccacctgg ctcagatccc agtcgatctg attgacttcc ttgctgatcc
     1321 ggggcgtctc caggttgcgg acccggtatc cctcgcgggt cagcaccgcc atctcgccgt
     1381 cgtccaggta gaccacggac cgggtgtact gcagtaacgg agaggcatcc gaggcgacga
     1441 accactcgtt ctcaccgacc ccgatcagca ggggcgaccc cttgcgggcc gcgacgagaa
     1501 cacccggctc ctccgaggag atgaaggcca ggccatacgc gccgtccacg tccttgagcg
     1561 cgacggcgac ggcctcttcc aggttgccct ggtacagctc gcccacgaga tgggcgagca
     1621 cctcggtgtc ggtctccgac gtgaaggtgt ggccgcgctg ctcgagcgcc ttacggatgg
     1681 cgccggagtt ctcgatgatc ccgttgtgaa tgacggcgat gcggccggat tggtcggtat
     1741 gcggatgcgc gttggtggtg gtcggcgccc cgtgggtggc ccagcgggtg tgcccgatgc
     1801 cgatagtgcc cagaggcatg tcctcttgca tctcgccttc aagcaccgag agcttcccgg
     1861 ctgccttcat gatcttgagc ccgcgaccgt tgacgacggc gatcccggcg gaatcgtagc
     1921 cgcggtactc cagccggcga agcccttcca ggagcagccc ggcagcctga cgcggtccga
     1981 tatatccaac aataccgcac atcgccatga acctcagtac aagagttctc ggcccgccgc
     2041 tatgagctct gcggcttcgg cctcagtcgg tgcttcggcg attagtcgta cgatcggctc
     2101 ggttccagag ggcctcacgt gcagccatcg atcgggccag gcgagccgga gtccatcgcg
     2161 gtcatcggca gtggcatcgg ggaattgctg ccggaggcgc tggtagagcg gagccaactt
     2221 gggcccccga ggcccctttg ccttgactat ggtgtaccga ggcgacgcag ccaccagccg
     2281 agagagcgtt accccagtcg ctgcaaggag atgcaagatc aaggccaccc ccaggggggc
     2341 atcgcggccg atgtggagtg cggggaacat taccccgccg tttccttcgc cgccgatcgt
     2401 ggcccgc
//
LOCUS       DASYRV010000595         2100 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2431111, whole genome shotgun sequence.
ACCESSION   DASYRV010000595 DASYRV010000000
VERSION     DASYRV010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2431111"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            201..1448
                     /locus_tag="VGQ24_15725"
     CDS             201..1448
                     /locus_tag="VGQ24_15725"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEV8456347.1"
                     /translation="MSHPTRHDPYASLRILNFRWFVSSLLAMTIATQIQAVVVAWQIY
                     ELTRDPLSLGLIGLAEAVPFIGFALFAGHIADRANRLRVSLLALVVLLTCALALLGFT
                     LRPGIITVNRVWPIYGVIFVSGIARSFLQPARSALGAELVPRELYPNAVTWRSSAWQL
                     AEVVGPAIGGLVYGFGSARAAYGVDATLMTVGVLSLARMRHAPKPSVPTGETFLESLA
                     TGVRFVRSQPVILGALTLDLFSVLFGGAVALLPVFAAEILHVGPEGLGILRASPAVGA
                     VLMSLVLAHRPPLRRAGRTLLVSVTLFGLSMIGFGLSRGFFLSATLLGLSGMVDTVSV
                     VVRSTLLQVMTPNHLLGRVASVNAIFIGSSNELGAFESGTAARLIGTVPSVVLGGLAT
                     LLVVAVTAIKVPSLRRLREIRVG"
     gene            1445..>2100
                     /locus_tag="VGQ24_15730"
     CDS             1445..>2100
                     /locus_tag="VGQ24_15730"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEV8456348.1"
                     /translation="MRPTVYQRRPAQDQAPYLPSGAEESGQPGSGGPPRSAKVNSRLA
                     LLVWLSLCGIWGSTWLGIKLGLRDLPPITFAGIRFALAAMLLAVIVMIRRVRLPSTAR
                     DWWVLAYTGFLSITVNYALVFWGEQYISSGLAALLSATVPLFGLPLAHRYLASEPLTV
                     AKVAGVLLGVIGVAVVFSGELGIGGPRALWASVGIIAAALATAHAGVLVKARGTHIEP
                     S"
BASE COUNT          284 a          689 c          693 g          434 t
ORIGIN      
        1 cgacgcatgc ctgccaggat taaagtgcgg gagttgtgat cagttgcggc gtttctcgct
       61 gcacaaaacg ggccgcgcaa ctcagagcgc gacaaggctt tgcaggcaaa cacttagcgg
      121 cgcgcggccc cgatgcgggg agcgacgagc ccggcaaaag tctttgccgc tcggcaaaac
      181 gcagctactt tccgcgccgc atgagccatc ctacccgcca cgatccgtac gcctctctcc
      241 gcattctcaa tttccgatgg ttcgtttcca gcctgttggc gatgaccatc gccacccaga
      301 tccaagcggt ggtggtcgcc tggcagatct acgagctcac ccgtgatcct ctctcactcg
      361 ggctcatcgg gctcgccgag gccgtgccat tcattggatt cgcgctgttc gccgggcata
      421 tcgccgaccg agccaaccgg cttcgagtct cgttgctggc gctggtcgta ctcctgacgt
      481 gcgcgctcgc cctgctcggc tttaccctgc gccccggcat catcaccgtg aaccgggtct
      541 ggccgatcta tggggtgatc ttcgtcagcg ggatcgcccg cagcttcctc cagccggcgc
      601 gctccgctct cggtgccgag ctcgtgcctc gggagctcta cccaaacgcg gtgacctggc
      661 gcagctcggc ctggcagctc gccgaggtgg tgggaccggc gatcggtgga ctggtctacg
      721 gcttcgggag cgcccgcgcg gcgtacggcg tggatgccac cctcatgacg gtaggagtgc
      781 tctcgctcgc gcggatgcgt cacgccccca agccgagcgt gccgacgggc gagacgtttc
      841 tcgaaagcct ggctaccgga gtccgctttg tgcgaagcca gcccgtcatc ctgggggcgc
      901 tgaccctgga tctgttctcg gttctcttcg ggggagcggt ggcgctgctg ccggtctttg
      961 ccgccgagat cctgcatgtc ggtcccgaag gtctcgggat actgcgggct tcgccggcgg
     1021 tgggagctgt gctgatgtca ctggtgctgg ctcaccgtcc gccactccgg cgtgccgggc
     1081 gcacgctgct ggtgagcgtg acgctgtttg gtctctcgat gatcgggttt ggcctctccc
     1141 gcggcttctt tctgtcagcc acgctgctcg ggctgagcgg gatggtggat acggtaagcg
     1201 ttgtagtgcg gtcgacgctg ctgcaggtca tgacgcccaa tcacctgttg ggccgagtcg
     1261 cctcggtcaa tgccatcttt ataggaagct cgaacgagct cggtgccttc gagtcgggca
     1321 ccgcggcgcg cctcatcggc acagtgccct cggtggtgct cggcggcctg gcgacgttgc
     1381 tggttgtggc ggtgacggcg atcaaggtgc cgtcgctccg ccgacttcga gaaattcgcg
     1441 tcgggtgagg cccactgtgt accagcgtcg tcccgcgcag gaccaggcgc cctatctccc
     1501 gagtggcgcc gaagagtccg gccaaccggg gtccggcgga ccgcctaggt ccgccaaggt
     1561 gaatagtcgg ctggcgctgc tcgtctggct gtcgctctgc gggatctggg gctcgacctg
     1621 gctcgggatc aagctcggcc tccgagatct accgccgatt acgttcgccg gtatccgctt
     1681 cgcgctcgcg gcgatgctgc tcgctgtcat cgtgatgatt cgacgggttc ggttaccgtc
     1741 caccgcccgg gattggtggg tactggccta taccggtttc ctgagcatca cggtcaacta
     1801 cgcgctcgtc ttctggggag agcagtacat ctcgtcaggc cttgctgctc tcctgagcgc
     1861 cacggtacca ctcttcgggc tccccctcgc ccaccgttac ctcgccagcg aaccgctcac
     1921 ggtggccaag gtggcgggcg tgctgcttgg cgtgattgga gtcgctgtcg tcttttccgg
     1981 ggagctcggg ataggtggtc ctcgagcgct gtgggccagc gtcggcatca tcgcggcggc
     2041 gctcgcgacc gcgcatgcgg gagtgctggt gaaggcacga ggcacccaca tcgagccttc
//
LOCUS       DASYRV010000596         2751 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2043040, whole genome shotgun sequence.
ACCESSION   DASYRV010000596 DASYRV010000000
VERSION     DASYRV010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2751
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2043040"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(341..1123)
                     /gene="map"
                     /locus_tag="VGQ24_15735"
     CDS             complement(341..1123)
                     /gene="map"
                     /locus_tag="VGQ24_15735"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR00500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEV8456349.1"
                     /translation="MIEILNSTELPRAREAGALVAGILQTLKSRCEVGTNLRDINLWA
                     QAMITEAGAQSCYVDYEPSFGRGPFGHYICTSVNDAVLHGLPYDYTLANGDLLTLDLA
                     VSKGGVVADSAISFIVGDSKSSESVAMISATERALSAGISAARPGARIGDISHAIGAV
                     LSEAGYRINTEFGGHGVGSTMHQDPHVPNFGRPGRGYRLRPGLLLALEPWVMANTAKL
                     VTDTDGWTLRSATGCRTAHSEHTIAITNDGAEVLTLPKQAQP"
     gene            1190..1492
                     /locus_tag="VGQ24_15740"
     CDS             1190..1492
                     /locus_tag="VGQ24_15740"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEV8456350.1"
                     /translation="MVRLPLTPAEVERGQRLGALLRRARGESSMLNTALDAGVSPETL
                     RKIESGRVATPAFPTIAAIADVLGLSLDALWAEINQSDGGVEPARSDRNAGERLVS"
     gene            2143..>2751
                     /locus_tag="VGQ24_15745"
     CDS             2143..>2751
                     /locus_tag="VGQ24_15745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase/quinone reductase family protein"
                     /protein_id="HEV8456351.1"
                     /translation="MQRHPGGERANPWPLNLRAHPLARVQLGAQVRTYRARAATEAEL
                     ERYWPQLLRVWPAYERFYRQGGRRSVFVLDPPPRSNPNRQSSSRPESYLPRPSLLGHP
                     APIGRWVWLFCRDCLTWETRGWAVDRGAAAVREPGHERRCSRQWKVARMIADQEVRDA
                     LAGSFLAALPPEVVEELLANGERFDYPGGITVYRPGSPPRAAL"
BASE COUNT          472 a          925 c          892 g          462 t
ORIGIN      
        1 cagcggctga accggccgca caccgagaag gtggtcgcac atgcggcacg gctcgtaggc
       61 ggcgaaacgc ataggcaagt accgcctcgg ttgattccga gcgcagcagt cctatgtcga
      121 tgcggtcggc gtccgccacc agcgcatgaa ccacggtcga cgaggccgac aacagctctg
      181 aaagtgcggc tgtagtatca ggatgcgtgc accgtagacg gtgcgatccc gaggcgcgcg
      241 gcgagctgaa caggtccttc ccgcaggcgt atgtgcagac tgacgcaccg acgattcgcg
      301 gtggagttct tggagaagat gagcacgggt cgctgcggcc tcacggctgc gcctgcttcg
      361 gcaaggtgag aacttcggct ccgtcgttgg tgatagcgat cgtgtgttcg ctgtgtgcag
      421 tccggcagcc cgtcgcgctt cggagtgtcc agccatcggt atctgtgacg agcttggcgg
      481 tgttcgccat gacccacggc tccaatgcca gcagaagccc agggcgcagt ctgtatccac
      541 gaccaggtcg tccaaaattc gggacgtgcg ggtcttggtg cattgtcgag ccgacgccat
      601 gaccgccgaa ctcggtgttg atccgatatc ccgcctcgct gaggaccgcg ccgatggcgt
      661 gggagatatc cccgatgcga gctccggggc gggccgcgga aatccctgcg ctcaatgcgc
      721 gctcggtcgc actgatcatc gcaacgctct ccgaagactt cgagtcgccc acgatgaagc
      781 tgatggcgga gtccgcgaca actccgcctt tggagacggc gaggtcgagc gtcagcaggt
      841 cgccgttggc aagcgtgtag tcgtagggca gcccgtggag cacagcatcg ttgaccgacg
      901 tgcaaatgta gtgaccgaac ggcccgcgtc cgaaggacgg ctcgtagtcg acgtagcagg
      961 actgcgctcc ggcctcggtg atcatggcct gggcccacag gttgatgtcc cgcaggttcg
     1021 tgcctacctc gcagcggctc ttcagcgtct gcaaaatgcc ggcgaccagg gcacctgcct
     1081 ccctggctcg tggcagctct gttgagttca agatctcgat catctggcac cttccccgtg
     1141 caaccaataa ctatcccggt aagagtatcc cggtgctagt atcggtgtca tggtcaggtt
     1201 gccgctcact cccgcagagg tcgaacgcgg acagcgcctc ggcgccctcc tgcgacgtgc
     1261 caggggggag agctcgatgc tcaacaccgc gctagatgca ggagtctcac cggagactct
     1321 tcggaagatc gagtccggcc gcgtagccac ccctgccttc ccgaccatcg ctgcgatcgc
     1381 cgacgtcctc ggcctttctc tcgatgcact gtgggcggaa atcaaccagt cagacggcgg
     1441 ggtcgaaccc gcaagatcag atcgcaacgc aggtgagcgg ttggtctcgt aggtctcgac
     1501 gccgtagccc cgttgcagtt gccgacgacc gaaaacgcgt ggacgcgact ctcaatcaac
     1561 gtccccggtc agtacagcta ggcacggaca attgcggccc cgcccggtcg ctgaagctgt
     1621 cgcgcctgtt cctcctcagc caccctccgc ccaagctcac cgtggaccca ccaccccgag
     1681 gtcaggcgga ggagcgacga atcctcgccg cggccctgca agcaacttca gcttgacggc
     1741 agggcggcag gctcttgggg tgtgccaacg ctcccttgac cgtcaggtcg ttcggccctc
     1801 tcgggactgc acctgtcgga gcaagctgta gcagggaggg tgagacgacc aaccgaggag
     1861 gcggcggaat gggtgccacg tcgcggctgc tcaactggtt cggcggaacc ccagtggggg
     1921 tgtggaccat caagcacctg gtctcccccc tggaccggcg gctgtaccgg cgcaccggtg
     1981 ggcggctggt cacccccggc catccccacg ggccgatcgt gctgctgacc accatcggcc
     2041 atccccacgg gccgatcgtg ctgctgacca ccatcggccg gcgcaccggc aaacagcaca
     2101 ccaccccggt cttccacctc caggatggga gcggatcatc ctgtgcaacg tcacccgggc
     2161 ggcgaacggg ccaacccctg gcccctcaac ctgcgcgccc atcccctggc ccgggtccag
     2221 ctcggcgccc aggtccgaac ctaccgggcc cgggcggcca ccgaggccga gctcgagcgg
     2281 tattggcccc agctcctgcg ggtctggccg gcctacgagc gcttctatcg gcagggcggc
     2341 cggcgatcgg tgttcgtgct cgacccacca ccgcggtcga accccaaccg gcagagcagc
     2401 tcacgccctg aatcatacct cccccgaccc agcctcctgg gtcatcccgc cccaataggg
     2461 agatgggtgt ggctcttctg cagggactgc ctgacctggg aaactcgtgg ttgggcggtg
     2521 gatcgaggag ccgcggcagt gagggagcct ggccacgagc ggcgatgctc gaggcagtgg
     2581 aaggtggcgc ggatgatcgc cgatcaagag gtccgtgatg cgctcgccgg cagcttcctg
     2641 gccgcgctcc cgccggaggt cgtcgaggag ctcctggcca atggagagcg cttcgactat
     2701 ccgggcggca tcacggtcta tcggcccggt tcgcctccga gggccgcact c
//
LOCUS       DASYRV010000597         2800 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2844857, whole genome shotgun sequence.
ACCESSION   DASYRV010000597 DASYRV010000000
VERSION     DASYRV010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2800
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2844857"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..291
                     /locus_tag="VGQ24_15750"
     CDS             <1..291
                     /locus_tag="VGQ24_15750"
                     /inference="COORDINATES: protein motif:HMM:NF018257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfocyanin-like copper-binding protein"
                     /protein_id="HEV8456352.1"
                     /translation="WRNADTASAHSLVVMVQREKLPLAGGRPGFSNAMTRMVTEGLPP
                     GQTDQTTFVAEEAGWYWLMCGVPGHALAGEWIELRVDPEATTASVQVKKPQQ"
     gene            complement(325..1530)
                     /locus_tag="VGQ24_15755"
     CDS             complement(325..1530)
                     /locus_tag="VGQ24_15755"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEV8456353.1"
                     /translation="MLDLLIQAAVALTVAPSPAGPWKAVLDLAGGPLPFRVEVERVAN
                     GWRGRLCNGSKCESFSAVHVDGDSVVFEIADYAATMKAALRADSLLGYYHNVGSNGPR
                     TIPFRAARGRWPVSRAPTRLVGRWDATYYQDLGTSPRVFDLRNEPGGFEGRIISSTSD
                     YGPYTGAVVGDSFAIGYFDGSFVYLLTGKLVGDTLRGVFHAGLRTQTPWSAVRSTGAP
                     HLKSPTEVSRADTTAPLRFAFPDLQGRLVRNDDRRFIGKVLLVDIFGSWCPTCHEATP
                     ELLRLHRRYHSRGLQIVGLAFEATGDTAIDARQVRRYRDKFGIPFPLLLAGLNDNESI
                     AAALPQLRDVTAFPTTVFVGRDGRVRRIYAGFHGLAAGPQHARLVREFETEIERLLSE
                     KRGTVNSER"
     gene            complement(1530..2387)
                     /locus_tag="VGQ24_15760"
     CDS             complement(1530..2387)
                     /locus_tag="VGQ24_15760"
                     /inference="COORDINATES: protein motif:HMM:NF019533.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1684 domain-containing protein"
                     /protein_id="HEV8456354.1"
                     /translation="MTRKTEGSFGLGVMLLLLAANLAAQVPPDLAAERAGYLAWLKTA
                     PNSPLSAVAQQRVGEGVRLGPAEADIPLAGIEEYRVYPSGGGLVLEGPGGKRAIGRGR
                     PYRIGKYALYLTGPQPGTVLTVFADGAGKEPPGYYDYDASLVFVGPLLRLKSPQQVRV
                     LASDGMEVEATEVGTVVVPLGGRTSLRVFRIPVAGGDESELEIFFQDGTNGDGSYPAG
                     RFVSLIPGADGKFRLDLNRARNPFCAYSPVYACPLPWGDNVIAEPVRAGERYSGGGLE
                     NPSARENAK"
     gene            complement(2384..>2800)
                     /locus_tag="VGQ24_15765"
     CDS             complement(2384..>2800)
                     /locus_tag="VGQ24_15765"
                     /inference="COORDINATES: protein motif:HMM:NF021604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HEV8456355.1"
                     /translation="LARLRQDLAVWQQQLQAREATLNAILEPGVELYQLTSSGDPNPG
                     IQLFWDRKRNSALIHGFRLKPVPEGKEYQLWFIKDGKPVPSVTFTPEPTGNARVEQVP
                     VPTDGKVSAAAVTVEPAGGSPQPTSPILLVGPLQKS"
BASE COUNT          499 a          918 c          903 g          480 t
ORIGIN      
        1 tggcgcaacg ccgacacggc gtctgcccac agcctcgtcg tcatggtgca gcgagagaag
       61 cttccgctcg caggcggccg gcccgggttc agcaacgcca tgactcgcat ggtcaccgag
      121 gggcttccac cgggtcagac ggaccagacc acgttcgtgg ccgaggaagc gggatggtac
      181 tggctcatgt gcggggtgcc tggccacgcg ctcgcggggg aatggatcga gctgcgggtg
      241 gacccggagg cgacgaccgc cagcgtgcag gtgaaaaagc ctcaacagtg aacggtgaag
      301 cgaatgggtg gtggcaggac ctgtttaccg ttcactgttt actgttccac gtttttcgct
      361 cagtagtctt tcaatttccg tctcgaactc ccgaaccagc cgtgcgtgtt gcggacctgc
      421 cgctaggcca tgaaacccgg catagatccg ccgcacccgc ccgtcccgcc ccacgaatac
      481 tgtggtggga aacgccgtaa cgtcgcgcaa ctgcggcagg gccgccgcga tcgactcatt
      541 gtcgttgaga ccggccagga gcagagggaa ggggattccg aacttgtcgc ggtagcggcg
      601 aacctgccgt gcatcgatgg ccgtgtcgcc ggtggcctcg aaggcaagcc ccactatctg
      661 cagtccacgg gagtgatatc gccggtggag gcgcaacagc tctggtgtcg cctcgtggca
      721 ggtggggcac cagctcccga agatgtccac cagcaggacc ttccctatga agcggcgatc
      781 gtcgttccgg accagccggc cctggaggtc ggggaatgcg aaccggagcg gcgccgtcgt
      841 gtcggctcgg gaaacttcag tcggtgattt gaggtggggt gctcccgtgc ttcgcaccgc
      901 gctccatggc gtctgggtcc gaagccccgc gtggaaaacg cctcggagtg tgtcgcccac
      961 gagcttgccg gtgaggagat agacgaacga accatcgaag tacccgatgg caaaactgtc
     1021 ccccaccacg gcgcccgtgt acggaccata gtcactcgtg ctggagatga tcctcccctc
     1081 aaacccgcct ggctcattcc tcagatcgaa gacccgcgga ctggttccca ggtcctgata
     1141 gtaggtcgcg tcccagcggc cgacgagtcg cgtcggagct ctgctgaccg gccaccggcc
     1201 ccgcgcggcg cgaaatggaa tggtccgcgg accgttactc ccgacgttgt ggtagtagcc
     1261 cagcagggag tcagcccgca gcgccgcctt catcgtcgcg gcgtagtccg cgatctcgaa
     1321 caccacgctg tctccgtcga cgtgtacggc cgaaaacgac tcgcacttgc tcccgttgca
     1381 gagccttcct cgccatccgt tcgcgacgcg ttcgacctcc accctgaagg gaagcggccc
     1441 tccggccagg tcgagcacgg ccttccaagg ccccgccggt gacggagcga cggtcaaggc
     1501 gaccgctgcc tggatcagca ggtccagcat tacttcgcgt tctctcgggc tgaggggttt
     1561 tcgagacccc cgccagagta gcgttcgccc gcgcgaaccg gctcagcaat cacgttgtcc
     1621 ccccatggca aaggacaagc gtacaccggg ctgtaagcac agaacggatt gcgtgcccgg
     1681 ttaagatcga ggcgaaactt gccgtctgct cccggaatga gactgacgaa tcgccccgca
     1741 ggataactgc catcgccgtt agtgccgtct tggaaaaaga tctcgagctc agactcgtca
     1801 ccccctgcga ccggtatccg gaatacccgg agggaagtac ggccaccaag cggaacgacg
     1861 acggtgccca cctcagtcgc ctcgacttcc attccgtccg acgccaggac gcgcacctgt
     1921 tgcggactct tcagtcgaag gagaggcccg acgaatacca gcgaagcgtc gtagtcgtag
     1981 taacccgggg gctccttccc agccccgtcg gcgaacacgg tcaggactgt gccgggctgc
     2041 gggccggtga gatacagcgc gtatttgccg attcgatagg gacgtccgcg gccgatagca
     2101 cgcttaccgc ctgggccttc gagtacgagt cctccgccgc tggggtagac tcgatactcc
     2161 tcgatcccgg ccaggggaat gtccgcctcc gccggaccca gccgcacacc ctccccaacc
     2221 cgctgctggg cgacagcgga cagcggcgag ttgggagcgg tcttgagcca tgcgagatag
     2281 ccggctcgct cggcagcgag atcggggggc acctgcgcag ccaggttggc agcgaggagc
     2341 aacaacatca cgccgagccc gaaggagcct tccgtcttcc gggtcacgac ttctgcagcg
     2401 gtccgaccag gagaatgggc gacgtgggtt gcggcgatcc gcccgccggc tctaccgtga
     2461 ccgccgcggc gctcaccttg ccgtccgtcg gaaccggaac ctgctccacc cgcgcgtttc
     2521 cggtcggctc gggtgtgaag gtgaccgagg ggactggctt tccgtccttg atgaaccaga
     2581 gctggtactc ctttccctcc ggcaccggct tgagccggaa gccgtggatg agcgcgctgt
     2641 tgcgcttgcg atcccagaac agctgaatgc ccgggttggg gtcaccgctg gaggtgagtt
     2701 gatataactc taccccgggc tcgaggatgg cgttcagcgt ggcctcgcgg gcttggagct
     2761 gctgctgcca tacggccagg tcctggcgta accgggccag
//
LOCUS       DASYRV010000598         4921 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3503006, whole genome shotgun sequence.
ACCESSION   DASYRV010000598 DASYRV010000000
VERSION     DASYRV010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4921
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3503006"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..238)
                     /locus_tag="VGQ24_15770"
     CDS             complement(<1..238)
                     /locus_tag="VGQ24_15770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456356.1"
                     /translation="MHPQIETLVFLAYLDSLFSESGVRQATPVRAVAETLNRRHADAM
                     REHTRQSALLVREGAEWKATPDWRLDRQIIRLGLY"
     gene            complement(242..550)
                     /locus_tag="VGQ24_15775"
     CDS             complement(242..550)
                     /locus_tag="VGQ24_15775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456357.1"
                     /translation="MRTPTILDVVQAVTGVAPSHPEVAVWWYGRAEMAGALPVLLVLE
                     GRDGAAPDTASIGSELAGRLGVRVVAIRMHRGAGETQTLYRLLTAEDERATAARAEGW
                     "
     gene            complement(563..1432)
                     /locus_tag="VGQ24_15780"
     CDS             complement(563..1432)
                     /locus_tag="VGQ24_15780"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEV8456358.1"
                     /translation="MRRRKGSELATGALVLVAGAVAVWGYFWLTSQPLGHGGYPLVVQ
                     LTDAGGLERGDRVRLAGVEVGTVRHVGLRDGAVLADITVDRDLSLPRDSRASLQASGA
                     FGGRYLALQPGKAEAILGRGDTLAARNIPTLAETFATVGTEAGEAFARASDLLSPDRV
                     ADLERGARSLSHSVDELTALTVALRATAAGVRRRVDDKRLDSTAADLALTARTLTGTS
                     AELRAASASLRSILGKIDQGHGSLGQAVNDPALYRALVTAATHVDEAAVGARALVHDL
                     RARPARYIRVSLF"
     gene            complement(1537..2286)
                     /locus_tag="VGQ24_15785"
     CDS             complement(1537..2286)
                     /locus_tag="VGQ24_15785"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEV8456359.1"
                     /translation="MIRLERVHKWFGRHEVLRGVNLSIRAGSTLALLGPSGVGKSVLL
                     KTVIGLLEPDEGEIWVGEVELTGAPERVADAVRCEMGYVFQYSALFDSLTVAENILLG
                     LDERRWPANSPATRARLQECLGWVNLSPEIASRYPAELSGGMQKRVAIARAIVAEQRY
                     ILYDEPTAGLDPVNVEKIAGLIRRLQGDRGVTSIVVTHDFELAKHVGDEVAILDGGRI
                     VADVPALALEALDHPMVQAFRHRPERVDVAV"
     gene            complement(2286..3110)
                     /locus_tag="VGQ24_15790"
     CDS             complement(2286..3110)
                     /locus_tag="VGQ24_15790"
                     /inference="COORDINATES: protein motif:HMM:NF014460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEV8456360.1"
                     /translation="MSDDKSLAVHLESVRPPPSIPPGRFGGSSAVAGLGAGASLAWAS
                     LRGLRHPRVYLPLTFAQVWEIGIASLPLVLLVAMISGAVTSEQTGYQYSSTLPPWIAG
                     SVITASVVTELGPLSTGFVLIGRVGARIGAELGAMSVTEQIQALRTLHRDPVVYLVLP
                     RVLAALIAVPALVALADAAGMLAGWGVALVRIPITTSEFTAGARAYFEPFQLYFSLLK
                     GAVFGVAIAFIACVAGLRATGGAAGVGRATTVSVVVGTVVMMILDLLLARLLRVFG"
     gene            complement(3339..4040)
                     /locus_tag="VGQ24_15795"
     CDS             complement(3339..4040)
                     /locus_tag="VGQ24_15795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456361.1"
                     /translation="MKAKTGRKLDMGARALIFSRVHPDPSPGYAELLARLEDRLARAT
                     RLTAQQREGILEVKSASARKRDLCRTLRRAHLAHLRHVARIAGHDLPELGQMFRLKRG
                     TIPYRTFRTAARSMADEAVSQKDVLVKHGLSDTVLENLAQALAEFDYVVEQGTRARRA
                     HVGASADLDLVANEVVLIVKAMDGLNRFRFARQPELLAAWASVSHVIATPRPTAARFT
                     PEGSTPSVGEVTPAA"
BASE COUNT          832 a         1666 c         1659 g          764 t
ORIGIN      
        1 agtagaggcc gaggcgaatg atctggcgat cgagccgcca gtccggcgta gccttccact
       61 ctgccccctc ccgcaccagg agcgcgctct gacgggtatg ctctcgcatt gcatcggcat
      121 gacgccggtt caacgtctcg gccactgcgc ggaccggggt ggcctggcga accccgctct
      181 cggagaagag cgagtccagg taggccagga agacgagggt ttcgatctgg gggtgcatga
      241 gtcaccagcc ttccgcgcgt gcagcggtcg cgcgctcgtc ctcggcggtg agcagccggt
      301 agagggtctg cgtctcaccg gcgccgcgat gcatccgaat ggcgaccacc ctcacaccca
      361 ggcgccccgc cagctccgag ccgatgcttg ccgtatccgg ggccgcgcca tcccggccct
      421 cgaggacgag cagaaccggc agcgcgccgg ccatctcggc acgcccgtac caccagaccg
      481 ccacttcggg atgggaaggc gccacgccag tgacggcctg gacgacatcg aggatggttg
      541 gggtgcgcat ggcgagcctc tctcaaaaga gtgagacgcg gatgtagcgc gcgggccgag
      601 cccgaagatc gtgtaccagc gcgcgcgcgc ccaccgcggc ctcatccacg tgggtggcgg
      661 ctgtgacgag cgcccggtag agcgccgggt cgttgaccgc ctggcccagc gagccgtgtc
      721 cctggtcgat cttgccgagg atcgacctca gcgaggcgga ggcggctcgc aattccgccg
      781 aggtgcccgt gagggtccgc gcggtgagcg cgaggtcggc ggccgtgctg tccaggcgct
      841 tgtcgtccac gcggcgccgg accccggcgg ccgtggcccg gagcgcgacc gtgagcgcgg
      901 tcaactcgtc gaccgagtgc gagagcgatc tggccccgcg ctccaagtcg gccacacggt
      961 ccggtgagag gagatcggag gcccgggcaa acgcctcgcc cgcctcggtt cctaccgtcg
     1021 caaaggtttc ggccagggtc gggatgttgc gtgcggcgag cgtatcgcct cgccccagga
     1081 tcgcctccgc cttcccgggc tggagggcca gataccggcc gccgaaggca ccgctcgcct
     1141 ggagcgacgc ccggctgtcc cgtggcaggc tcagatcccg atcgaccgtg atgtccgcca
     1201 ggactgctcc atcccgaaga ccgacgtggc ggaccgtccc gacctcgacg ccggctaggc
     1261 gaacccgatc gccccgctcc agcccgccgg cgtcggtcag ctggaccacc agcgggtagc
     1321 cgccgtgtcc caacggctgg gaggtgagcc agaagtaacc ccagacggcc acggctcccg
     1381 caaccagcac cagagctccc gtcgccagct cactcccctt gcgtcggcgc atcgcgtcct
     1441 cctatgccgc tagagtagcg tgctgtcccg atccatctct agcgcactcg cgggccagca
     1501 gcttgaaccg tattgctcac cggggcagcc gcgacgtcat accgcgacgt cgacccgctc
     1561 gggccggtgg cggaatgcct ggaccatggg gtggtccagc gcctccagtg cgagggcggg
     1621 gacatcggcc acgatgcgac cgccgtccag tatcgccacc tcgtcgccga cgtgtttcgc
     1681 cagctcgaag tcatgggtga cgacgatgct ggtcacgccc cggtctccct gcaggcggcg
     1741 aatcaggccg gcgatcttct ccacgttcac cggatcgagg ccggcggtgg gctcgtcgta
     1801 caggatatac cgctgctcgg ccacaatcgc ccgcgcgatg gccacccgtt tctgcatccc
     1861 ccctgacagc tctgcgggat agcgggaagc gatctccggg ctcaggttaa cccatcccaa
     1921 acactcctgg agccgcgcgc gggtggccgg ggagttggcc ggccagcgcc tctcgtcgag
     1981 accgaggaga atgttctccg cgacggtgag cgagtcgaag agggcggagt actggaagac
     2041 gtaccccatc tcgcaccgga ctgcatcggc cacccgctcc ggcgctccag tgagctcgac
     2101 ctcccccacc cagatctcgc cctcgtccgg ctccagcagg ccgatgacgg tcttgagcag
     2161 cacgctctta ccaacacccg agggccccag cagggccagg gtgctgccgg cgcgaatgga
     2221 aaggttgacg ccgcgcagca cctcgtgcct gccgaaccac ttgtgcaccc gctcgagccg
     2281 gatcatcagc cgaagacccg gagcagccgg gcgagcagaa gatcgaggat catcatgacg
     2341 acggtcccga cgaccacgct cacggtggtg gcgcgcccga cgcccgcggc tccgcccgtc
     2401 gcccgcagcc ccgccacgca ggcgatgaag gcgatcgcga cgccgaagac cgcacctttg
     2461 aggagggaga agtagagctg gaacggctcg aaatacgccc gcgcgccggc ggtgaattcg
     2521 gaggtggtaa tcggaatccg gaccagggcg acgccccagc cggccagcat gccggcggcg
     2581 tcagcgaggg caacgagagc aggaaccgcg atcaaggcag ccagtacccg aggcagcacc
     2641 agatagacca ccggatcgcg gtgtagcgtt cggagggcct ggatctgctc ggtcaccgac
     2701 atggccccga gctccgcccc gattcgcgcg ccgacccggc cgatcagcac gaagccggtg
     2761 gacagagggc cgagctcggt caccacgctg gcggtgatga cgctgccggc gatccagggc
     2821 ggcagagtgg aggagtactg atagccggtc tgttccgagg tcaccgcgcc ggagatcatc
     2881 gctacgagga ggaccagcgg caggctggcg ataccgatct cccagacctg ggcgaaggtg
     2941 agcgggagat agacccgagg gtggcgcagg ccgcggagag aggcccaggc gagtgaggcc
     3001 cccgccccca ggcccgcgac cgccgaactc ccgccgaacc gtcccggagg tattgaagga
     3061 ggcggtctga ccgactcgag atgcacagcc aagctcttat catcagacat cggaacaccc
     3121 tgacgaccca ctccgccatt acactcaaat ccgtcacggc cggatttggt tcccgcgcct
     3181 ggtcaccagt caagcgacga cgcgcgattc ggccacgtaa catcccaaaa ggcaactcgt
     3241 caagagcgct gcgcgagtca tcttcatcgt ggtaggcaac ttggcccatt cgaggatggg
     3301 ggggcttgaa cggcggtgct cccctgggtg ggggagccct atgctgcggg tgtgacttcg
     3361 ccgactgacg gcgtcgatcc ctcgggcgtg aacctggctg cggttggccg cggcgttgcg
     3421 atcacgtggc tgacgctggc ccaggcggca agcagctcgg gctgacgcgc gaaacggaag
     3481 cggttgagac cgtccattgc cttcacgatc aggaccacct cgttggccac caggtcgaga
     3541 tcggcgctcg ctccgacgtg cgcccggcgt gctctggttc cctgctccac gacatagtcg
     3601 aattcggcga gcgcctgcgc gaggttctcg agcacggtat cggagagccc gtgcttcacc
     3661 aggacatcct tctggctcac ggcctcgtcc gccatgctcc gcgcagccgt gcggaacgtc
     3721 cggtacggga tggttcccct cttcaacctg aacatctgcc ctagctccgg cagatcgtgg
     3781 ccggcaatcc gggcgacgtg tctgaggtga gcgaggtggg ctcgtctcag cgtgcggcac
     3841 aggtcgcgct tgcgcgcgct ggcgctcttg acctcgagga ttccttcccg ctgttgggcg
     3901 gtaagacgcg tcgcccgggc caggcggtcc tccaggcgtg ccagcaattc ggcgtagccg
     3961 gggctcgggt ccgggtggac ccggctgaag atgagcgcgc gggcccccat atccagcttc
     4021 cggccagtct tcgccttcat acggtcctcc cttcctgagc gatcgggcgg cgaccgagtc
     4081 accgcaccag cgagcgcgat gatcgaagtg tgtcgagctg tcacggtctc ggctcggcgg
     4141 aggacaggag aggcgaggag tgtgccagcc ccgcgatgag gatcgcgaga gcgattgagg
     4201 ggaacggagc cacggccagg tggaatccgg ttccaaccgc ttgggattgc gaccgttgcc
     4261 actggaaccg cggtgcggcc ggccggtata gcgccgttgt cgcacggtac cgcacgcctt
     4321 cgggtagttc cgcgacgctg gccggcggga tcacgtcttc ggaaggcgag cttgcgcctt
     4381 cagctgctgg tatggcgtgt cagcggactg gtaccgcgcc tctggcgggc ggtatgccaa
     4441 ctctggcgat tggtctaacg actctgacga ttggtacacc ggctcttcga cttggtaccg
     4501 cgcctccagc ccactggtat cgcgaccctg gcgagcggta tcacgaccct ggcgaccggt
     4561 atgccaaccc gaggctctgg aaccatgatc cacgtgactg gtagcgcagt ccaggcgacc
     4621 gggaccgcac aactgacgat tggcatggtg agtctggcga ataggatcgg aaccctggcg
     4681 agcggtttca cgatcctggc ggctgtgagc gctcctctac tctatggaat gacgacgctg
     4741 ccgagcagat ctaggaccgg ggttagaggt atggcggcgc agccggccta aatcgaggcg
     4801 gtgccattgg ctccggacat ctcgctattc aggggtgtcc agcaaatcgg acggtctgat
     4861 taacctgcgc tccaccctcc cgacggtttc atcaatttgt cggagataga gacgatctcg
     4921 a
//
LOCUS       DASYRV010000599         2756 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3288845, whole genome shotgun sequence.
ACCESSION   DASYRV010000599 DASYRV010000000
VERSION     DASYRV010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2756
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3288845"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..576)
                     /locus_tag="VGQ24_15800"
     CDS             complement(<1..576)
                     /locus_tag="VGQ24_15800"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEV8456362.1"
                     /translation="MADPFRQITIALSDRYRIERELGAGGMATVYLARDLKHDRKVAI
                     KVLKPELAAVIGAERFLSEIKTTANLQHPHILPLHDSGQADSFLFYVMPFVEGESLRD
                     RLNREKQLPVADAVRIATEVAGALGYAHRHGIIHRDIKPENILLHDGSALVADFGIAL
                     AASKAGGTRMTETGMSLGTPHYMSPEQAMGER"
     gene            complement(671..743)
                     /locus_tag="VGQ24_15805"
     tRNA            complement(671..743)
                     /locus_tag="VGQ24_15805"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(708..710),aa:Phe,seq:gaa)
     gene            850..1431
                     /locus_tag="VGQ24_15810"
     CDS             850..1431
                     /locus_tag="VGQ24_15810"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HEV8456363.1"
                     /translation="MPRSTPLLMLAIAVVTAGSLALEFQSHAAAQTSPLLAAHPARRP
                     APSWSNESWLNTGSPLTLEGLRGKVVLLNFWVFTCSNCTNTVPSLVNFDRKYRGQELV
                     LIGIHTPEFPPYAGEHDKANLARALQQYGIDYPNAQDNDSRTWNLYRIRYWPSFVLID
                     KKGVIRYEGAGEFHLNDRNYGMWDQRIRELLAE"
     gene            1437..1787
                     /locus_tag="VGQ24_15815"
     CDS             1437..1787
                     /locus_tag="VGQ24_15815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456364.1"
                     /translation="MTLTTSVLALGWLAQACARGPAGPLSLRAERSGSDTRVSLIAAP
                     GYKINARLKPALELPDGRVLRLDSPHLTPDSAYFVQPPSALVPGRHSRIKGRLRASVC
                     DPGQTVCRSAVVEL"
     gene            1891..2535
                     /gene="upp"
                     /locus_tag="VGQ24_15820"
     CDS             1891..2535
                     /gene="upp"
                     /locus_tag="VGQ24_15820"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEV8456365.1"
                     /translation="MPSPPFSNLTVLSHPLIQHKLSILRDRHTSTRDFKQLVSEIATL
                     MAYEVTKDLPTAPVDIETPLERTTGRQVSGKKLTLVPILRAGLGMVDGITQLIPSARV
                     GHIGLYRNHETLQPVDYYFKIPSDEVERDFFILDPMLATGGSAVAAVSALKKAGAKRI
                     RFLSLVAAPEGVARMREAHPDVPIFAAALDRELNQVGYILPGLGDAGDRLFGTR"
BASE COUNT          469 a          951 c          857 g          479 t
ORIGIN      
        1 gcgctccccc atggcttgct ccgggctcat gtaatgcggc gtgccgaggc tcatcccggt
       61 ctcggtcatg cgggtgccgc ccgccttgct ggcggccagc gcaatgccga agtcggccac
      121 cagcgcgctg ccgtcgtgca gcaggatgtt ctcgggcttg atgtcgcggt ggatgatgcc
      181 gtgacggtgc gcgtagccga gcgcgccggc cacttcggta gcgatccgga cggcgtcggc
      241 caccggaagc tgcttctcgc gattgagccg gtcgcggagc gactccccct cgacgaacgg
      301 catgacgtag aaaaggaacg aatcagcctg gcccgaatcg tggagcggca ggatgtgcgg
      361 gtgctggaga ttggcggtgg tcttgatctc ggagaggaac cgttcggcgc cgatgacggc
      421 agcgagctcc ggtttcaaga ccttgatcgc gaccttgcgg tcgtgcttga ggtcccgggc
      481 aaggtacact gtggccatgc cacccgcgcc gagctcgcgc tcgatgcggt agcggtcgga
      541 cagggcgatg gtgatctgac ggaaggggtc ggccatgggc cgcacgtaac atgcggctca
      601 cggcggcagg gcgctaggct gtcggtacag ctttgctgca atcgggacgt gcgaggtcag
      661 ctaactgcag tggccaggga gggaattgaa cccccgacac gcggattttc agtccgctgc
      721 tctaccaact gagctacctg gccgtcgggg cgggaaatat aggaagtggc ttgggcccgg
      781 ccaagggacc aacgggagcc aaatcggccc ctccgggcgt ttactcttga tcaatagccc
      841 ggaggctcca tgccccgttc gaccccgctt ctcatgctgg ccatcgccgt cgtcaccgcc
      901 gggtcgctgg cgctcgaatt ccagagccac gcagcggccc agaccagccc gctcctggcc
      961 gcgcacccgg cccgccgccc agccccctcg tggagcaacg agagctggct caacaccggc
     1021 tctccgctca ccctggaggg gctccggggg aaggtggttc tgctcaactt ctgggtcttc
     1081 acctgctcca actgcaccaa cacggtgccg tcgctggtca acttcgatcg caaatatcga
     1141 ggccaggagc tggtcctgat cggcattcat acccctgagt tcccgcccta cgccggcgag
     1201 cacgacaagg ccaacctggc ccgggcgctg cagcagtacg ggatcgacta ccccaatgcc
     1261 caggacaacg actcccggac ctggaacctc taccggatcc gctactggcc cagcttcgtg
     1321 ctgatcgaca agaagggcgt gatccggtac gagggagccg gtgagttcca tctcaacgat
     1381 cggaactacg gcatgtggga ccagcgaatc cgggagctgc tggccgagtg aggagggtga
     1441 ccctgacgac ttccgtactg gcactcggct ggctggcaca ggcctgcgcc cgcggacccg
     1501 ctggccctct ctcccttcga gccgagcggt ccggctccga cacccgggtt tctctcatcg
     1561 cggcgcccgg ctacaagatc aacgcccggc tcaagcccgc cctggagctg cccgacggac
     1621 gggtgctccg actcgattca ccccacctga cgccagactc ggcctacttt gtccagccgc
     1681 cgagcgcgct cgttcccggc cggcactccc gcatcaaggg aagactccgg gccagcgtct
     1741 gtgaccctgg ccagacagtc tgccgcagcg ctgtggtcga gctatgagac tgtcacctat
     1801 agtcggcggt tccgcccctt cgcgaagcct gtcctgagcg cagcgaagga ttcagggtga
     1861 cagccgtctg ctcccccgac atattcctgc atgccctcgc caccattctc gaacctcacc
     1921 gtcctctccc atcccctcat ccaacacaag ctctcaatcc ttcgcgaccg gcacaccagc
     1981 acccgggact tcaaacagct ggtgagcgag atcgcgacac tcatggccta cgaggtgacc
     2041 aaggacctcc ccacggcgcc ggtcgacatc gagaccccgc tggagcgcac caccggccgg
     2101 caggtctccg gcaaaaagct gaccctggtg ccgatactcc gggcgggcct gggcatggtg
     2161 gacggcatca ctcagctcat cccctccgcc cgggtaggac acatcgggct ctatcgcaac
     2221 catgagacgc tccagccggt ggattactac ttcaagattc catccgacga ggtcgagcgc
     2281 gacttcttca ttctggatcc catgctcgct accggcggtt ccgccgtcgc cgcggtcagc
     2341 gccctcaaga aggcgggggc caagcggatt cgtttcctct ccctggtggc ggcgcccgaa
     2401 ggcgtggccc ggatgcgcga agcccatccc gacgtgccga tcttcgctgc tgccctcgac
     2461 cgggagctca accaggtggg ctacatcctc cccggtctcg gtgacgccgg cgatcggctg
     2521 tttgggacaa ggtgaggaaa agcgtgaaca gtgaacagtt aacagtaaac gggcctctcc
     2581 cgaccgcccc tgttcaccgt tcactgttta ccgttcacgc ttttgcggag ggtcgagggt
     2641 gagtggatct cgactgacct tctggggcgc cgccggccag gtcaccggct ccatgcacct
     2701 cctcgaggca gccggagccc gcattctgct ggacgccgga ctgttccagg gccgcc
//
LOCUS       DASYRV010000600        10140 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2670992, whole genome shotgun sequence.
ACCESSION   DASYRV010000600 DASYRV010000000
VERSION     DASYRV010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10140
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2670992"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            48..968
                     /locus_tag="VGQ24_15825"
     CDS             48..968
                     /locus_tag="VGQ24_15825"
                     /inference="COORDINATES: protein motif:HMM:NF019339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEV8456366.1"
                     /translation="MRAARTIRLFDALKAGYDALLASDYKTVAKVLDVVLTQHPNEPN
                     GLLLAAMLGAERGRRTMPNGEPIDGLSLADEWVARAIDQADAPWPLAWNFKATLYFKL
                     GRLEDSLKAADHAISLGGQYHEPWVNRGNTLMALGRYDEAASSFGEAGKIKPGHPSHR
                     FNRSFLKLVAGDWRTGFDEYEARWGMQEWNRDHGRPIHSTHPRWWGEPLEGKRLFLHW
                     EQGYGDSIMMLRYLPWVRSRGPGHIVLEVQKALMSLCADRLDTTELTILGPGMDAPPC
                     DLWCPLFGLPALHKTTRETVPDGQWLRRVA"
     gene            965..1357
                     /locus_tag="VGQ24_15830"
     CDS             965..1357
                     /locus_tag="VGQ24_15830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456367.1"
                     /translation="MIFVVRVTRELIESWVLTGSEISARCIKGLPLGARLVAASFEDE
                     RVVVLDFAVETPGNTTITEFNPIYERVLAPHVTRGDIMYVRDAITDLRKADIAGWPIY
                     ESQLGALADRIEAALPPDPPKRKDMKAE"
     gene            1354..1896
                     /locus_tag="VGQ24_15835"
     CDS             1354..1896
                     /locus_tag="VGQ24_15835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456368.1"
                     /translation="MKIAFSWRGSTSHVRDWRRSTALYLWNPLFAIPDTEWHSLDVQD
                     DASALLAPFGWPNVVDHSKDIRDFKDSAAIVESCDLVITVDTATLHLAGALGIPTWAL
                     VYSPPEWRWGLSGERTPWYAALHLYRQPRPDDWESVFKIIAFDLRCLTAHPSMVGDPL
                     RVLPRGGVSGCRAAAITEHI"
     gene            1933..2418
                     /locus_tag="VGQ24_15840"
     CDS             1933..2418
                     /locus_tag="VGQ24_15840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456369.1"
                     /translation="MAVKQLTRKQACSALGEMPVRTFALLCSQGLPRKGDGQKARFPW
                     PEIHHWYIERERKKAREEARPKTLDEARKRREAAEAQIAEIDLEERLNTLVSVDSFKE
                     AMTATHMRIRAKILAIPSRVGPMVVGLRTVQEAVTVLERETHNVMAELRGEEVHDGAA
                     A"
     gene            2399..4312
                     /locus_tag="VGQ24_15845"
     CDS             2399..4312
                     /locus_tag="VGQ24_15845"
                     /inference="COORDINATES: protein motif:HMM:NF042573.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit family protein"
                     /protein_id="HEV8456370.1"
                     /translation="MTAPPLEGLFSTDQLLAEDEAICRRVYSPPPVLTLSEWSDLYRV
                     LSRAASAEPGQWRTDRAPYQRGIMDAMSDPAIERVVLMKSSQVGFTEMIGNACGFYID
                     QDPAPILMVQPTIEMGKAWSMDRLQPMLRESTQLMGKVRESNRRHSGDTILHKIFPGG
                     HLTIVGANSAAGLASRPIRVALFDEVDRYPLSAGDEGDPITLGTRRTTTFWNRKLILG
                     STPTLKGVSRIEQLWLESDQRRYYVPCPDCEEAQVLKFSQFRGELGEDGRYIPESIRY
                     ACTGCGSLVGEENKSRMLTAGAWVAENPGARTVGFHISALYSPWMSWAEIQREYNESR
                     HDMTRLQVWTNTILGEPWEDRGGDPRDLEGRRDPYPKGQPPYAVAVLTMGVDVQDDRL
                     EYIIRGFGQGEESWPIDRGVIVGDPSIPISKRDSPWIALEERRAALYRRADGRELPVL
                     VTCVDSGHHTDAAYAYTGPRFRQRVYATKGSSTPGRPLVPRRPSRNNKGRVALFEIGT
                     EAGKDMVYSRLRVTKAGPLHYHVPDWMDAEWFSQVTAEKLVKKQISGRWIRRYELPRG
                     ARNEALDCEVLCLAALRLAPIRLSELGRMAGQAEGPPAPGESDQPEMAVPPVMAPPAE
                     PKQRRIRTIRFLR"
     gene            4327..4584
                     /locus_tag="VGQ24_15850"
     CDS             4327..4584
                     /locus_tag="VGQ24_15850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456371.1"
                     /translation="MTALQDRRLQRRDLYVYGVALEALSYYEPRPLKLHAVSRMAHID
                     ESDASRAIQRLLRLGYLESGPRDGNRRTFLVRAVRIINLAS"
     gene            4645..5187
                     /locus_tag="VGQ24_15855"
     CDS             4645..5187
                     /locus_tag="VGQ24_15855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456372.1"
                     /translation="MPWGIPDRLRAGDTWLWKATFPDYPAAEGWTPQYVIRGVGRLQW
                     AASYGVAVGEEWTITIPASVTGTLEAGRYEWSVLVVGSGAFSGRSHTVETGILLVLAN
                     LLTAAEGDRQSYAEKTLAVIREKMAGRITDDIQSYMIGTRQVGKIEIRELMRLEAVFS
                     ARVRRERNGGQLDQPVETWL"
     gene            5197..6783
                     /locus_tag="VGQ24_15860"
     CDS             5197..6783
                     /locus_tag="VGQ24_15860"
                     /inference="COORDINATES: protein motif:HMM:TIGR01539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HEV8456373.1"
                     /translation="MGLRTRLRTQVMRWFGSAQKPAPQARAYSAGAVSRLFASWITPL
                     LSANQAIEPDLRRVRDRSRSLCRDNPHAKAFLNLLRTNVIGPSGIELKSQLTSTRGNL
                     HRGNRDLELAFYRWGRAGTASSDGLHSWIELQQLAVTLMAQDGEFLARRLRGVAGNPY
                     GYTLQLLDPDQLDESYTRASVGGSNAIRMGVEINAVGKPVVYHVWKYHPAEGGREHSS
                     NERVPIPAEDIVHLFLIERPGQCRGMPWFAPVLRNLKHLDDWRENAVVAARIGAAKMG
                     FFVDKEGLGAGGQNDETDGTGTAPDRLKMDIEAGMFGELPPGYEFQSFDPGYPNIEYE
                     AFERAILRAISAGLGVSYSALTGDLREVNYSSDRSGRIAERDLYRTLHGYLIEKLCQP
                     IYGDWLNAATARQAIRPPTYDLDLLEQSAVWQGRGWQWVDPRADVLSIKEQIALGLFS
                     RTAACTEMGRDFQDIVEQLKAEQAFAAEQGVSVAGLTSQGDSAQGGSNDGSSGTDGSA
                     GGDAQSNGRADPSVRLVRHA"
     gene            6728..8617
                     /locus_tag="VGQ24_15865"
     CDS             6728..8617
                     /locus_tag="VGQ24_15865"
                     /inference="COORDINATES: protein motif:HMM:TIGR01554.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HEV8456374.1"
                     /translation="MLSRTVALTRASDSSGTPEIALSSEYEVERQDWFGERWIEVLDH
                     SKDAIDLSRAKRGLALLLDHVTGQVIGRAEKFKLGEDKVLRAAVRFSNSTRGKEAAQD
                     FADDILTDVSVGYRIAELELAGKRDGVSIYRAIRWEPMEVSLVAVPADPTVGKDRGAN
                     EGTRPVVIRKSLITDPPDGGKERTMPEGTQEAPAAGGAKVNVEAKRSEKDLAKLAKRF
                     KMEDALGSWIERDFTPEQALEEVNTRLGETAAAQAKIPAVVTDLGMPQKDRAKYSMMR
                     AMQAVANGDWKDAGFEREVSEAISKEFRTPPSDENAFFMPTGWGTRASGQLDTATSTQ
                     GQELVFIEPGSFIELLRNKTKVLLLGGRFLPGLVGNVSFPRQTGPGTFTWTGEAPTAD
                     VAASNMTFDQLAMTPKTGQSMTLVSKRLLLQSPSANVALESLVRSDIAAIHGLAIDSV
                     SIGAGGTNTPNGILATANSVSVLALGTNGAAPAYVDTVNLFRDLAIANSIVESSAVLT
                     TPGIAATLMKTQKFATTNGEAVWIGTFDDGRLLGQNGGYRAAASNQVPSNLTKGTSTT
                     ICHAIIAGNFAELMIGEWGAMEILVDPYTLAARNLVRIISTQMLDIGLRHKDSFKVIK
                     DALAT"
     gene            8633..8866
                     /locus_tag="VGQ24_15870"
     CDS             8633..8866
                     /locus_tag="VGQ24_15870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456375.1"
                     /translation="MAVVTFHAKATLEGRAYLPGQTTEIPDRLVYPLLRQGVITVPGE
                     YSAVFGRYKEAKAAAGYDAPAPIITARDPVPRR"
     gene            8868..9173
                     /locus_tag="VGQ24_15875"
     CDS             8868..9173
                     /locus_tag="VGQ24_15875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456376.1"
                     /translation="MGLRSDVVSILSGFGSVRVVHSTGETRGVLDDAEAEQQLGDGST
                     VAKRGRLLRIPAAALPTLVAEDSLDVGDPEDDETLVTYRVLDTLRESDGLIWRLFLA"
     gene            9170..9694
                     /locus_tag="VGQ24_15880"
     CDS             9170..9694
                     /locus_tag="VGQ24_15880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456377.1"
                     /translation="MIEPVRIIADWLDDGSQGVNAKLVTVPRDVGDAQPPSVTVYDET
                     RDDRIGRGRVGDPEDALPAVYVTLRNGALLPESQVMDDGFFNADLLIRYCTRETDASK
                     AKQEAFYTLRAAAWSIRKLNRTDASHAARTRNSVVLTRILTVSYEPTLEEVSDALLVG
                     TLVVPCEWRDFGTI"
     gene            9734..>10140
                     /locus_tag="VGQ24_15885"
     CDS             9734..>10140
                     /locus_tag="VGQ24_15885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456378.1"
                     /translation="MPAPAKLSQILAMLGKEETTYGSAVALTTTADGIQLQFDNRDFP
                     WASLDYAFDGDLGPSVGNLGTVLRAGKAGRSLQYEAPTRAKGAGAAYSAAVLPSIHRL
                     LKASGFDAALTTTTGSEKYVYTPSAPGTTYTSLT"
BASE COUNT         1822 a         3309 c         3403 g         1606 t
ORIGIN      
        1 gagaagaatc tcggagaggc gctggataag gcgctcaaga cggcccgatg agagcggccc
       61 gcaccatccg actcttcgat gccctaaagg cgggctacga cgcgctgctg gcctccgatt
      121 acaaaacggt ggcgaaggtg ctcgacgtgg tgctgaccca gcacccgaac gagccgaacg
      181 ggctactgct ggctgccatg ctcggcgcgg aacgcgggcg ccggaccatg ccgaatgggg
      241 agccgatcga tgggctctcg ctggccgacg aatgggttgc gcgcgcgatc gaccaggccg
      301 atgcgccctg gcccttggcg tggaatttca aggcaacgct ctacttcaag ctgggccggc
      361 tggaggactc gctcaaagca gcagaccacg ccatcagcct cggcggccag taccacgagc
      421 cctgggtcaa ccgcggcaac acgctcatgg ccctgggccg gtacgacgaa gccgccagct
      481 cgtttggcga agcggggaag atcaagcctg gccacccctc gcaccgattc aaccgcagct
      541 tcctcaagct ggtcgcgggc gactggcgaa ccggcttcga tgaatacgag gctcgctggg
      601 gcatgcagga gtggaaccgc gaccatggcc ggccaattca cagcacgcac ccccgctggt
      661 ggggcgagcc gctcgagggg aagcggctgt ttctccactg ggaacagggg tacggggact
      721 cgatcatgat gctccgctac ctgccctggg tgagaagccg aggccccgga cacatcgtgc
      781 tggaggtcca gaaagcgctc atgtcgctct gtgcggatcg ccttgacacc accgagctca
      841 ccattctggg gcctgggatg gacgctccac cctgcgatct ttggtgcccg ctcttcgggc
      901 tgcccgccct gcacaagacg acgcgtgaga ctgttcccga cggacaatgg ctcaggaggg
      961 tggcatgatc ttcgtcgtga gggtaactcg cgaattgata gagagctggg ttctgaccgg
     1021 ctccgagata tcagcccggt gtatcaaggg attgcccctc ggtgctcgtc tagttgcggc
     1081 gtctttcgag gatgagcggg tagtcgtcct cgacttcgca gtagagaccc ctggcaatac
     1141 cacgattact gagttcaacc ccatctatga gcgagtgtta gctccccatg tcacgagggg
     1201 agacatcatg tacgtccgag atgccatcac tgacctcaga aaagcagata tcgcgggctg
     1261 gcctatttat gaatcgcagc ttggggcctt ggcggatcgg atcgaggccg ccctgcctcc
     1321 ggatcccccc aaaaggaagg atatgaaggc agaatgaaga tcgccttctc atggcgtggg
     1381 tcgacctccc atgttcggga ttggcggcgc tccactgcgc tctatttgtg gaatccgctc
     1441 ttcgccatcc ccgacacgga gtggcacagc ctggacgtac aggatgatgc gagcgcgctg
     1501 ctcgctccct tcggttggcc caacgtggtc gaccattcca aggacatcag ggacttcaag
     1561 gacagcgcgg ccatcgtaga gtcctgcgat ctcgtgatca ctgtggacac cgcaacgctg
     1621 cacctcgctg gtgcactggg gattccaaca tgggccctgg tgtacagccc cccggagtgg
     1681 aggtgggggc tatcgggtga gaggacacca tggtatgccg cgctccatct ctatcgtcag
     1741 ccgaggccag acgattggga gagcgtattc aagatcatcg ccttcgatct acgatgcctc
     1801 acggcgcacc ccagcatggt tggcgacccc cttcgggtcc ttccgagggg gggcgtaagc
     1861 gggtgccgcg ctgcggcgat caccgagcat atatgaaact ccataagtgg cttgcactta
     1921 ccgacgcggt gtatggccgt taagcagcta acccgcaaac aggcatgctc cgcgctcggg
     1981 gaaatgccgg tgcgcacgtt cgcgttgctc tgctcccagg gtctgccgcg gaagggcgac
     2041 ggccagaagg cccggttccc ctggccggag attcaccact ggtatatcga gcgggaacgg
     2101 aagaaggcgc gcgaggaggc acgacccaag acgctggacg aagcgcggaa acggcgggag
     2161 gccgccgagg cccagattgc ggagatcgac ttggaggagc ggctcaacac cctggtgagc
     2221 gtcgacagct tcaaggaagc catgaccgcg acgcacatgc ggatccgggc caagatcctg
     2281 gccattccct cccgggttgg cccgatggtc gtcgggctgc gcacggtgca ggaggcggtg
     2341 acggtgctcg agcgggaaac ccacaacgtc atggcggaac tccgcggcga ggaggtgcat
     2401 gacggcgccg ccgcttgagg ggctcttctc cacggaccaa cttctcgccg aagacgaggc
     2461 catctgtcgt cgcgtctaca gccccccgcc ggtcctcacc ttaagcgaat ggtccgatct
     2521 ctaccgggtg ctctcgcggg ctgcatcggc ggagccgggc cagtggcgga ccgaccgggc
     2581 accctaccag cgcggcatca tggacgcgat gagcgatcca gccatcgagc gggtcgtgct
     2641 gatgaagtcg tcccaggtgg gcttcaccga gatgatcggg aacgcctgcg gattctacat
     2701 cgaccaggac cccgccccga tcctgatggt gcagccgacg atcgaaatgg ggaaggcgtg
     2761 gagcatggac cggctccagc cgatgctccg ggagtcgacg cagctgatgg ggaaagtccg
     2821 ggaatcaaac cgccggcact ccggcgacac gatcctgcac aagatctttc ctggcggaca
     2881 cctcacgatc gtcggggcca actcggcggc cggcctggcc tcccggccaa tccgcgtggc
     2941 cctgttcgac gaggtggacc gctaccccct ctcggcaggg gacgaaggcg atcctatcac
     3001 cctcgggacc cgacgcacca cgaccttctg gaatcggaag ctgatcctgg gctcgacgcc
     3061 gacgttgaag ggtgtctctc ggatcgagca gctctggctc gagagcgatc agcggcggta
     3121 ctacgtcccc tgccccgact gcgaggaggc gcaggtgctc aagttctcgc agttccgggg
     3181 cgagctggga gaggacggcc gctacatccc ggagtcgatc cggtatgcct gcaccgggtg
     3241 cgggagcctc gtcggcgagg agaacaagtc gcggatgctg accgccggcg cctgggtggc
     3301 cgagaaccct ggcgctcgga cggtcggttt ccatatctcc gccctctact ctccctggat
     3361 gagctgggcc gagatccagc gcgagtacaa cgaatcccgg cacgacatga cccggctcca
     3421 agtctggacc aacaccatcc tgggcgagcc ctgggaggac cgcggcgggg acccgcggga
     3481 cctggaaggc cggagggacc cgtatcccaa gggccagcca ccctacgccg tggcggtgct
     3541 gaccatgggc gttgacgtcc aggacgaccg gctggagtac atcatccggg gcttcgggca
     3601 gggtgaggag tcctggccga tcgaccgcgg ggtgatcgtc ggggacccga gcatcccaat
     3661 cagcaaacgg gactcaccgt ggatcgcgct cgaggagcgc cgcgccgcgc tctaccggcg
     3721 ggctgatggc cgggagctcc cggtgctcgt gacctgcgtg gattcggggc accacaccga
     3781 cgcggcctac gcctacaccg ggccccggtt ccgccagcgg gtctacgcca ccaagggctc
     3841 gagcacgcca ggccgcccgc tcgtgccacg ccggccgagc cgcaacaaca agggccgggt
     3901 ggccctcttc gagatcggca ccgaagccgg gaaggatatg gtctactccc ggctccgcgt
     3961 gaccaaggcg ggcccgctcc actaccacgt ccccgactgg atggacgccg agtggttcag
     4021 ccaggtcaca gccgagaagc tggtcaagaa gcagatctcg ggccggtgga tccgccggta
     4081 cgagctgccc cgtggggccc ggaacgaagc gctggattgc gaggtgctct gtctcgcagc
     4141 gctccggctg gcgccgatcc ggctgtccga gctcggccgc atggccggcc aagccgaggg
     4201 accgccagcg ccgggtgaat cggaccagcc cgagatggcc gtcccgccgg tgatggcgcc
     4261 cccagctgag ccgaagcagc gccgcatccg caccatccgg ttcctccggt gattcctcag
     4321 gccgtcatga ccgcgctcca ggaccgtcgg ctccaacggc gggacctcta tgtctacggg
     4381 gtcgccctgg aagcgctctc ctactacgag ccccgcccgc tgaaactcca cgccgtgagt
     4441 cggatggcgc acatcgacga atccgatgcc tcccgggcga ttcaacgcct cctgcgcctc
     4501 ggctatctcg agtccggccc ccgcgacgga aatcgtcgta ccttcctcgt tcgagcggtc
     4561 cgcatcatca acttggcgtc ctaaccaacc aaatcttttg gcccttctcg ggccatcatc
     4621 caccttcgtc tcatggcgcc aaccgtgccg tggggcatcc ctgatcgtct ccgagccggg
     4681 gatacctggc tctggaaagc gacgttcccg gactatcccg cggccgaagg ctggaccccg
     4741 caatacgtga ttcgtggggt cggccgcctc caatgggccg cgagctacgg ggtcgccgtg
     4801 ggggaagagt ggaccatcac gattccggcg agcgtcaccg ggacgctcga ggccgggcgg
     4861 tacgagtggt cggtgctggt ggtcgggagc ggcgcttttt caggtcgatc gcacacggtc
     4921 gagaccggca tcctgctggt gctggccaac ctccttacgg cggctgaagg tgaccgccag
     4981 agctacgccg agaagacgct ggcggtcatt cgggagaaga tggccggccg gatcacggac
     5041 gacatccaga gctacatgat cggcacccga caggtcggga agatcgagat ccgggagctg
     5101 atgcgactgg aggcggtgtt ctcggctcgg gtgcggcggg aacggaacgg cgggcagctc
     5161 gaccagccgg tcgagacctg gctctgagga ggtagcgtgg gacttcggac gcgtctgcgg
     5221 acgcaggtga tgcgctggtt tgggtcggcc cagaagccgg ccccccaggc gcgagcctac
     5281 tccgctggcg cggtctcccg gctcttcgcg tcctggatca ccccgctcct gagcgccaat
     5341 caggcgattg agcccgatct ccggcgcgtc cgagatcgca gtcgctcact ctgccgcgat
     5401 aatccgcacg ccaaagcgtt cctgaacctc ctccgcacga acgtcatcgg gcccagcggc
     5461 atcgagctca agtcccagct caccagcacg cggggcaacc tgcatcgcgg gaaccgggat
     5521 ctcgagttgg ccttctaccg gtggggccgc gcaggcacgg cctcctcgga tgggctgcac
     5581 tcctggattg agctccagca gctcgccgtc acgctgatgg ctcaggacgg cgaatttctc
     5641 gcccggcggc tccgtggcgt ggcagggaat ccctacggct acaccctcca gctcctcgat
     5701 ccggatcaac tggacgaatc ctacacccgg gcgtcagtcg gcggatctaa cgcgatccgg
     5761 atgggcgtgg agatcaatgc ggtcgggaag ccggtggtct atcacgtctg gaaataccat
     5821 ccggccgaag gcggtcggga gcattccagc aacgagcggg ttccgatccc cgccgaggac
     5881 atcgtccatc tcttcctgat cgagcggccc ggccagtgcc gcggcatgcc ctggttcgcg
     5941 ccggtgctga ggaatctcaa gcacctggac gactggcgcg aaaatgcggt cgtggcggca
     6001 cggatcggcg ccgcgaaaat gggcttcttc gtggacaagg aggggctcgg cgcgggcggc
     6061 cagaatgacg agaccgacgg caccggcacg gcgccggacc ggctcaagat ggatatcgaa
     6121 gccggcatgt tcggcgagct cccgcccggc tacgagttcc agagcttcga ccccggctat
     6181 cccaacatcg aatatgaagc gttcgagcgg gcgattctcc gcgcgatttc ggcggggctc
     6241 ggcgtctcct actccgcgct caccggtgac ctgcgcgagg tcaactactc ctcggatcgc
     6301 tccggtcgga ttgccgagcg cgacctatac cgcacgctcc acggctatct catcgagaag
     6361 ctctgccagc cgatctacgg ggactggctc aacgcggcca ccgcgcggca ggccattcgc
     6421 ccgcccacct acgacctgga cctcctcgag cagagcgcgg tctggcaagg tcggggctgg
     6481 cagtgggtgg atccgcgggc ggacgtgctc tccatcaagg aacagatcgc gctcggcctc
     6541 ttctcgcgca ccgcggcgtg caccgagatg ggccgcgact tccaggacat tgtcgaacag
     6601 ttgaaggcgg aacaggcgtt tgcggccgag cagggcgtgt cagtggccgg actgacgtcg
     6661 cagggggaca gcgcacaggg aggctccaat gacggcagca gcggaaccga cggtagtgca
     6721 gggggggatg ctcagtcgaa cggtcgcgct gacccgagcg tccgactcgt ccggcacgcc
     6781 tgagatcgcg ctttcgagcg aatacgaggt cgagcggcag gactggtttg gcgagcggtg
     6841 gatcgaagtc ctggaccact ccaaggatgc gatcgacctc tcccgggcca agcgggggct
     6901 cgccctcctc ctcgaccatg tgaccggtca ggtcatcggc cgggccgaga agttcaagct
     6961 cggcgaggac aaggtgctcc gcgcggcggt gcggttcagc aattccacgc gcgggaaaga
     7021 ggccgcccag gacttcgcgg acgacatcct gacagacgtc tcggtcggct atcggatcgc
     7081 cgagctggag ctggccggca agcgggacgg cgtttccatc taccgcgcga ttcgctggga
     7141 accgatggag gtctcgctgg tcgccgtacc agcggatccc acagtcggga aggaccgagg
     7201 cgcgaacgag ggcacgcgac cggtggtcat tcggaagtcc ctcattactg atccgccgga
     7261 cggcgggaag gagcgcacca tgccggaagg gacgcaggaa gctcccgccg ctggcggagc
     7321 caaggtgaac gtggaggcga agcggtcgga gaaggatctc gcgaaactcg cgaagcggtt
     7381 caagatggag gacgcgctcg ggagctggat cgagcgggac ttcaccccgg agcaggccct
     7441 cgaagaggtg aacacgcgcc tcggcgagac ggccgcggcc caggccaaga tccccgcggt
     7501 ggtgaccgat ctcgggatgc cgcagaaaga ccgcgccaag tactcgatga tgcgcgccat
     7561 gcaggccgtc gcaaatggcg actggaaaga tgccgggttc gagcgcgagg tctccgaggc
     7621 cattagcaag gagttcagga ctcctccgag cgacgagaac gcgttcttca tgccgactgg
     7681 ctggggcacc cgcgccagcg gccagctcga cacggcgacc agcacgcagg gccaggagct
     7741 cgtcttcatc gagccgggca gcttcatcga gctgctccgg aacaagacca aggtcctcct
     7801 gctcggtggg cggttcctcc ccggcctggt cgggaatgtc tccttcccgc ggcagaccgg
     7861 ccccgggacc ttcacctgga ccggtgaagc gccgacggcc gatgtcgcgg ccagcaacat
     7921 gaccttcgat cagctcgcga tgactccgaa gaccgggcag tcgatgacgc tggtctccaa
     7981 gcggctcctc ctgcagtcgc cctcggccaa tgtcgcgctt gaatccctcg tgcgctccga
     8041 catcgcggcg atccacggac tcgccatcga ctcggtgagc atcggggccg gcggcaccaa
     8101 cacgccgaac gggatcctgg ccacggccaa ctccgtctcg gtgctcgcgc tgggcaccaa
     8161 cggcgctgca ccggcttatg tggacacggt gaatctgttc cgggatctcg cgatcgccaa
     8221 ctcgatcgtc gagagctcgg ccgtgctcac cacgccgggc atcgcggcca ccctgatgaa
     8281 gacccagaag ttcgccacca ccaacggcga ggcggtctgg atcggcacgt tcgatgatgg
     8341 ccggctcctg ggccagaacg gcgggtatcg cgccgcggcc agcaaccagg tgccgtcgaa
     8401 cctgaccaag ggcacgtcga ccacgatctg ccacgcgata atcgcgggca acttcgcgga
     8461 gctcatgatc ggggagtggg gggctatgga aatcctcgtg gatccctaca ccctggctgc
     8521 ccggaacctg gtccggatca tcagcaccca gatgctcgat atcgggctcc ggcacaagga
     8581 ctcgttcaag gtcatcaagg acgcgctcgc gacctgagcc ggagggtagt ccatggcggt
     8641 ggtgacgttc cacgcgaagg ctacgctgga aggccgggcg tacctgcccg gccagaccac
     8701 ggagatccca gaccgtttgg tctatccgct cttgcgtcag ggcgtcatca ccgtgccagg
     8761 cgagtactcg gcagtgttcg gacgatataa ggaggccaag gcggcggccg gctacgacgc
     8821 gccggcgccg atcatcacgg cgcgcgaccc ggttccacgg cgctgacatg ggcctccgga
     8881 gcgatgtggt gtccatcctc tccggcttcg gctcggttcg ggtggtgcac agtaccgggg
     8941 agacgcgcgg cgtcctggac gacgccgaag cggagcagca gctgggcgat gggtcgaccg
     9001 tcgccaaacg aggacggctg cttcggattc ccgcggccgc gctccccacc ctggtcgccg
     9061 aggactcgct cgacgttggg gacccggagg atgacgagac cctcgtgacc tatcgcgtgc
     9121 tcgacacgct ccgggagagc gatgggctga tctggcggct ctttctcgca tgatcgagcc
     9181 cgtccggatc atcgccgact ggttggacga tggcagccag ggcgtcaacg cgaagctggt
     9241 gacggtgccg cgggacgtgg gggatgccca gccgcccagt gtcacggtgt acgacgagac
     9301 gcgggacgat cggatcgggc ggggccgggt cggggacccc gaggatgcac tccccgcggt
     9361 gtatgtgacg ctgcgcaacg gagccctgtt gccggaaagt caggtgatgg acgacggctt
     9421 cttcaacgcc gacctcctga tccgctactg cacccgggag accgatgcct cgaaggcgaa
     9481 acaggaggcg ttctacacgt tgcgggcggc ggcctggtcg atccggaagc tcaaccggac
     9541 ggacgcgagc cacgcggcgc ggacccgcaa cagcgtcgtg ctgacccgga tactgacggt
     9601 gagctacgag ccgacgctgg aagaggtctc ggatgccttg ctggtgggaa cgttggtggt
     9661 cccgtgcgaa tggcgggatt tcggaaccat ctaaataggg gcggcgggcg ccgcagaaag
     9721 cgagtaccag accatgccgg caccagccaa actgagccag atcctcgcga tgctggggaa
     9781 ggaagagacg acctacggtt cagcggtcgc cctcaccacc accgccgacg ggattcagct
     9841 ccaattcgac aatcgcgact tcccctgggc gtcgctcgat tacgccttcg atggggacct
     9901 tgggccgagc gtcggcaacc tgggcaccgt gctgcgggcc ggcaaggccg gccggagcct
     9961 gcagtacgag gccccgaccc gcgccaaggg cgccggtgcc gcctactcgg ctgcggtgct
    10021 cccctcgatc catcgactcc tcaaggcgtc ggggttcgat gcggccctca ccaccacgac
    10081 cgggtcggag aagtacgtct acaccccgag cgcgccgggg acgacctaca cctcgctcac
//
LOCUS       DASYRV010000601         6561 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2672870, whole genome shotgun sequence.
ACCESSION   DASYRV010000601 DASYRV010000000
VERSION     DASYRV010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6561
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2672870"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..360
                     /locus_tag="VGQ24_15890"
     CDS             <1..360
                     /locus_tag="VGQ24_15890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456379.1"
                     /translation="AGDALPLLERAIDPRVRYSLDLALLGYGYSKAERRREAEALRQE
                     LLERRSRGYVSPVSIALLAAGLGDTAETFVWLGRGVEAHDPVLNYGFASQPLFEPLRR
                     DPRGAGILRRMGLPPTR"
     gene            complement(482..554)
                     /locus_tag="VGQ24_15895"
     tRNA            complement(482..554)
                     /locus_tag="VGQ24_15895"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(519..521),aa:Lys,seq:ctt)
     gene            complement(558..629)
                     /locus_tag="VGQ24_15900"
     tRNA            complement(558..629)
                     /locus_tag="VGQ24_15900"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(594..596),aa:Glu,seq:ttc)
     gene            complement(731..803)
                     /locus_tag="VGQ24_15905"
     tRNA            complement(731..803)
                     /locus_tag="VGQ24_15905"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(767..769),aa:Glu,seq:ctc)
     gene            complement(951..1023)
                     /locus_tag="VGQ24_15910"
     tRNA            complement(951..1023)
                     /locus_tag="VGQ24_15910"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(988..990),aa:Trp,seq:cca)
     gene            complement(1110..1183)
                     /locus_tag="VGQ24_15915"
     tRNA            complement(1110..1183)
                     /locus_tag="VGQ24_15915"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1147..1149),aa:His,seq:gtg)
     gene            complement(1239..1883)
                     /locus_tag="VGQ24_15920"
     CDS             complement(1239..1883)
                     /locus_tag="VGQ24_15920"
                     /inference="COORDINATES: protein motif:HMM:NF013247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HEV8456380.1"
                     /translation="MRHAPPALIEAIRIRSGAAPLWYLHLRRLAVSCKALGIPLPGEL
                     PTPEGGPDRVYRLEVGMRGVQVSERLVGSVAPVKLMVSRVAHHSYPYKTTDRAQFDRA
                     LDAARAAGMDDALLLTPGGFVAETAIYSVLWWEDGKLCAPAFDLGVLPGVGRARLTEL
                     VGQVEERHSSLIEIQGLPLFLVNSVRGIVKVAALEGDSVPDSRETDTLAARFWP"
     gene            complement(1887..2786)
                     /locus_tag="VGQ24_15925"
     CDS             complement(1887..2786)
                     /locus_tag="VGQ24_15925"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEV8456381.1"
                     /translation="MIPRTTARLQLLGAALLFSTGGAAIKWADFTGWQIASFRSGIAA
                     LALLLMTPAARRGWTLRQAQGGLWRAALVGVAYAGCLVLFVLANRLTTAANTIFLQST
                     APLYILLLAPWLLKEPIRRHDLGFMLAVGLGLLLFFVGTEHPGATAPDPDRGNLLALA
                     SGFCWALTICGFRWLSAAPGRGSPVAAVVSGNLTAFLITLPMASPVGRHPVGDWAVIA
                     YLGVFQIALAYVFVTAAIRVLPALESSVILLIEPVLNPLWAWVVQRETPGAWALLGGA
                     IILGATTLKSWIEGRGRVAAPVT"
     gene            2915..3517
                     /locus_tag="VGQ24_15930"
     CDS             2915..3517
                     /locus_tag="VGQ24_15930"
                     /inference="COORDINATES: protein motif:HMM:NF017853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF937 domain-containing protein"
                     /protein_id="HEV8456382.1"
                     /translation="MVVLEMLGERLNGAVVDRISDQIGAESDTTSSAIETAVPLLLTA
                     IADNLTDQDQGRSLVTAVSEDHDGTILDDVSGYLTGARSGVGAGILRHLLGSRRLTVE
                     RRLSQVTGLASHKVGQLLTMLAPLVMGALGRAKRELGLNQRGLVTVLAVEQEQLEQSA
                     PGAMGRLRRILGQTYDGTVMNHVRRMLGKTFDRRTRKHTP"
     gene            complement(3573..3962)
                     /locus_tag="VGQ24_15935"
     CDS             complement(3573..3962)
                     /locus_tag="VGQ24_15935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456383.1"
                     /translation="MTAGATGPPSLTEIGTVWLLVAFLGGPLVWAVHLVLSYFLVALS
                     CGTGWEGARSGIVIATIVCAVAALGVGAFGMRLGERLRAQGTSGDELDPPSTRGFLAL
                     NGAILAVLFAGAIVLAGISPLFLPMCS"
     gene            complement(3970..6492)
                     /gene="ctaD"
                     /locus_tag="VGQ24_15940"
     CDS             complement(3970..6492)
                     /gene="ctaD"
                     /locus_tag="VGQ24_15940"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR02891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HEV8456384.1"
                     /translation="MATAQASPAPPATVEEFKRTWATPRGIRGLLAEVNNVPIAKRYM
                     ITGFTFFVLGGLLGLLLRIQLGSPENTFLDAETYNQIFTMHGTTMMFLFVIPFIEALA
                     NYILPLLLGTRDLPFPRMTALSYWTYLFGGILLYSSFLYGVAPDGGWFAYVPLTNLEY
                     SPGLNMDFWDIGLSVAEIAAIGAAAEMIVAILRVRAPGMTLNRIPLFGWAMLVTGAMI
                     IFAFTPLIVGTAMLELDRKGLTSFFKPEAGGKPLLWQHIFWVFGHPEVYIMLLPAAGI
                     VSHVVQTMARRPIVGYTLMVLSAVAVGFLSFGLWVHHMFTTGLSLVALGFFTAASLAI
                     AIPNGVQVFGWIATLWSGRPRFRTPLLFVIGFLVIFTAGGLTGVMVAAVPFDWQAHDS
                     YFVVGHFHYVLIGGVVFPLFAGLYYWLPKVTGQLLSERLGRWNFWLMFVFFNVAFFPM
                     HLSGLLGMPRRVYTYSPDVGLETLNFISTIGAFGFGTGIALFVINVFWSRKHGEPAGE
                     NPWGGDTLEWSETSPPPDAQFVRIPVVTTRYPLWEQPDLLPHESRLARQLEDLDARPA
                     QWRGTLVTSVLDARPLAIAHMPGPTYAPFTMAVALLAIFMGALIEEVLLLAGGGLLTT
                     FALFLWFRPQRSETLALQELGSRENDPERLPLAVGGAIANGWWAMLVFLAVLATALVT
                     IVASYFYLADGRAGASEARPSMIEPVVATILSLTAVATTSWATRGTRRRFPRPVLLGL
                     AATWLLSAAALGLSVRGFPWGTLAPEASAYASSVLGVLGFQWLVLLILLATVTIGLLW
                     SISKPGDPRGHAIVHNTALLTAFTAASGAVVFAVVYLSPGLW"
BASE COUNT         1359 a         2113 c         2113 g          976 t
ORIGIN      
        1 gcgggcgatg ccctgccgct gctggagcgc gccatcgatc cgagggtgcg gtactcgctg
       61 gacctggcac tgctgggcta tggatacagc aaggcggaga ggaggcggga ggcggaggca
      121 cttcggcaag agctgctgga gcggcggtcg cgcggctacg tgagccccgt cagcatcgcc
      181 ctgctcgccg ccgggttggg cgacacggcg gagactttcg tgtggctcgg gcgtggggtt
      241 gaggctcacg atccggtgtt gaactacggc ttcgccagcc agccgctgtt cgagccgttg
      301 cggcgggacc cgcgcggggc ggggattctc cggcgcatgg ggctcccccc gacccggtga
      361 gcccgcggcc agccagttga tctcctgcac agtggggcct gaacggagtg tgtggcacat
      421 tacctggcat acctgagcaa tgaaatgggc tccacgaagg agcccacgtc ttgtcccgca
      481 gtgcgccgcg taggaatcga acctacaacc tagtgattaa gagtcacttg ctctgccaat
      541 tgagctagcg gcgcggatag ccccaagggg agtcgaaccc ctctctggac cttgaaaggg
      601 tcccgtcctg accgatagac gatggggcca ggcttctcca ctcgctcccc atcgaaaaca
      661 tatcgaagga gcctatctcc gatcggagca gcccatagcc aatagcccag agccaatggc
      721 ctgctccgca tagcgctaac gggattcgaa cccgtgtttg ggccttgaga gggccccgtc
      781 ctagtcccct agacgatagc gccgtgtttg agctgggagc ttggagctag gagctaaagc
      841 agtcgggccc acggctaccg tcaccaaagt tgagcgccca cctcctgcac caataaccca
      901 aaccggagca gctccgaact cctggctctc agctcctagc ttgccccgaa caggcccggc
      961 aggactcgaa cctgcaaccc ccggttttgg agaccggtgc tctaccactt gagctacgga
     1021 cctctgcacc agagagctgg gagcttggag ctttgcgacc gaccgctgca cccagtggct
     1081 cccagctcct agctcccagc ttctccaggg gtggctgacg gggatcgaac ccgcaacctc
     1141 cggagccaca gtccggcgct ctaaccgatt gagctacaac caccgcgggc acaaacaccg
     1201 tgcgagcccg ggaaaatacc gctcgaaaga cgcgtgggtc aaggccaaaa acgtgccgcg
     1261 agcgtgtcgg tttccctcga atcgggcacc gaatcaccct ccagagccgc cactttcacg
     1321 attcctcgca ctgagttcac cagaaacagc ggcagcccct gaatttctat caagctggag
     1381 tgccgctcct ctacctggcc caccagttcg gtcagccgcg cccgccccac ccctggcagc
     1441 acgcctagat cgaaggccgg cgcgcacagc ttgccgtcct cccaccacag cacgctatag
     1501 atcgccgtct cggccacgaa tccgccgggc gtgagcagca atgcgtcgtc catgccggct
     1561 gcccgggccg cgtcgagggc ccggtcgaac tgcgcgcgat cggtggtctt gtacggatac
     1621 gagtggtggg ccacccggga gaccatgagc ttaaccggcg cgacggagcc aaccaaccgc
     1681 tcgctcacct gcacaccgcg catgccgacc tcgagccgat acacccggtc cggaccccct
     1741 tccggcgtcg gcagctcacc cggcaacggg atccccaatg ccttacagct taccgccagg
     1801 cgcctgaggt ggaggtacca gagcggagca gcaccgctcc ggattcggat cgcctcgatc
     1861 aacgccggtg gcgcatgccg catggctcag gtcaccggcg cggcgactcg gccgcgccct
     1921 tcgatccagc tcttgagtgt ggtcgccccg agaatgatcg cgccgcccag gagcgcccac
     1981 gcacccggcg tctcccgctg gaccacccag gcccagagcg gattgagaac gggctcgatc
     2041 agcagtatga ccgacgactc caacgccggg agcacccgga tggccgcggt cacaaacacg
     2101 taggcgaggg cgatctggaa gacgccgaga taggcgatca cagcccaatc gcccaccggg
     2161 tgccgtccca ccggcgacgc catcggcagc gtgatgagga aggcggtgag attcccggag
     2221 actacggccg ccacgggtga tccccgcccc ggcgccgcgc tgagccagcg aaaaccgcag
     2281 atggtgagcg cccagcagaa gccgctcgcc agcgcgagca gattgccccg atccggatcc
     2341 ggcgcggtgg ctccggggtg ctccgtgccg acaaagaaga gcagcagacc gagcccgacc
     2401 gcgagcatga agcccaggtc gtgccgccgg atcggctcct tcaacagcca gggcgcaagg
     2461 aggaggatgt aaagcggcgc cgtggactgg agaaagatcg tgttcgcggc cgtggtcagc
     2521 cggttggcca atacgaacaa gacgagacag ccggcatacg cgaccccgac cagggccgca
     2581 cgccagagcc cgccctgagc ctgccgaagg gtccagccgc gacgggcggc cggggtcatc
     2641 aacaacaacg ccaatgccgc gatgcccgag cgaaagctgg cgatctgcca gccggtgaag
     2701 tcggcccact tgatcgccgc tccgccggtg gagaagagga gcgcggcccc aagcagctgg
     2761 agacgggcgg tggtgcgggg gatcatggtg gaaggataag gcgctatgga cggccgacta
     2821 gccctcgtca ctcgcgccgt gatccagcgc acctcaaagc cggaccctcg ggcgcatgtt
     2881 gcccaccctg tttcaattct gttgaggtac tcatatggtt gtgcttgaaa tgctcggaga
     2941 gcggctcaac ggtgctgtgg tggatcggat cagcgaccag atcggcgccg agtccgacac
     3001 caccagcagt gccatcgaaa ccgcggttcc actcctgctc accgcgatcg ccgacaacct
     3061 taccgatcag gaccagggcc gatcactcgt gaccgctgtt tcggaggacc atgacggcac
     3121 catcctcgac gatgtttcgg gctacctgac tggcgcccga agcggggttg gggccggaat
     3181 cctgcgccac ctgctgggtt cgaggcgatt gactgtggaa agaaggctta gccaggttac
     3241 tggcctcgcc agccacaaag taggtcaact gctgactatg ctcgccccgc tggtcatggg
     3301 cgcgctcggc cgcgccaagc gcgagctcgg cctgaatcaa cggggactcg tcaccgtgct
     3361 cgccgtcgag caggaacagc tcgagcaatc cgctcccggc gcaatgggac ggctcagacg
     3421 gattcttggc cagacctatg atggaaccgt catgaaccac gtccgccgaa tgctgggcaa
     3481 gacgttcgat cgtcggaccc ggaaacacac accctaaccg gggtgcaatg acaaccagag
     3541 agcggctgaa ctccatggtg catggctgag gctcagctgc acataggcag aaagagcggc
     3601 gatatcccgg cgagcacgat ggccccggcg aacagcacag cgaggattgc cccattcaag
     3661 gcaagaaacc cgcgagtcga tggtgggtcg agctcatcgc ctgaggtgcc ttgggcacgc
     3721 aagcgctccc ctagtcgcat gccaaacgcc ccgaccccca gagccgcgac cgcgcatacg
     3781 attgtggcga tcacgattcc actccgggcg ccttcccacc cggtaccgca actgagcgct
     3841 acgagaaagt agctcaacac caggtggacc gcccagacga gcggtccccc tagaaaggcc
     3901 acgagcagcc aaacggtgcc gatctcagtt aggctagggg gcccggtcgc gccagcagtc
     3961 atcttggctt caccaaagcc cgggggaaag gtagacgacc gcaaacacta cggccccgct
     4021 cgcggcggta aaggccgtca ggagggcggt gttgtggacg atagcgtggc ctcgcgggtc
     4081 accgggcttg gagatggacc atagcagccc gatggtcacc gtcgccagca gaataaggag
     4141 caccagccac tggaatccga ggacgccgag gacgctcgac gcgtacgcgc tggcctcagg
     4201 agcgagtgtg ccccagggga agccacgtac gctcagcccc agcgcggcgg cggaaagcag
     4261 ccatgtggcc gcaagaccga ggaggactgg tcgtgggaac cgcctccgag ttcctcgagt
     4321 cgcccacgat gtagtcgcga cggctgtcag cgaaagaatc gtcgccacca ccggctcgat
     4381 cattgagggg cgcgcctcgg acgcgcccgc gcgaccgtcg gcgaggtaga agtagctggc
     4441 aacgatggtg accagtgccg tcgcgagaac ggcgaggaag acaagcatcg cccaccatcc
     4501 gttggcgatc gccccgccca ccgcgagcgg gagccgttcc gggtcgttct cacggctgcc
     4561 gagctcttgc agagcaagag tctccgagcg ctggggtcga aaccacagga acagagcgaa
     4621 ggtcgtgagc aagccgccgc cggcgagcag taacacttct tcgatcagtg cccccatgaa
     4681 gatcgcgagc aaggcgactg ccatcgtgaa tggcgcgtat gtaggcccgg gcatgtgggc
     4741 gatcgccagc ggtctggcgt cgagcaccga ggttaccagc gtgccccgcc actgggccgg
     4801 tcgggcgtcc agatcttcga gctgccgcgc cagccgcgac tcatgaggaa gcaagtcggg
     4861 ttgctcccag agcggatacc gagtggtcac caccggaata cggacgaatt gcgcatcggg
     4921 gggcggcgaa gtctccgacc actcgagcgt gtcgcccccc cagggattct cacccgccgg
     4981 ctcgccatgc ttccgactcc agaacacatt gatcacgaag agagcaatcc cggttccgaa
     5041 tccgaacgcc ccgatcgtgg agataaagtt gagtgtctcg agtccgacat cgggcgaata
     5101 ggtgtacacg cgacgaggca tgcccaggag accggagagg tgcatgggga agaaggcgac
     5161 gttgaagaag acaaacatca gccagaagtt ccaccttccc aggcgctcgc tcaggagctg
     5221 tccggtcacc tttggaagcc aatagtagag cccggcgaac aggggaaaca ccactccgcc
     5281 gatcagcacg tagtggaagt gccctaccac gaagtagctg tcgtgcgcct gccagtcgaa
     5341 cgggacagcg gcgaccatga cgcccgtgag acctccagcg gtgaagatca ccaggaaacc
     5401 gatcacgaag agcagaggcg tgcggaaccg ggggcggccg gaccacaagg tcgcaatcca
     5461 cccaaagacc tgcaccccgt tgggtatggc gatagccaga ctcgcggcgg tgaagaatcc
     5521 caatgccact aacgagaggc cggtggtgaa catgtgatgc acccagagtc caaaactgag
     5581 gaagccaacg gctacggccg agagcaccat gagggtgtac cccacgatcg ggcgacgcgc
     5641 catagtttgg accacgtggg agacgatccc cgcggcgggc aggagcatga tgtacacttc
     5701 gggatggccg aatacccaga aaatgtgctg ccacaggagg ggcttgcccc ccgcctcggg
     5761 cttgaagaac gacgtcaggc ccttccggtc gagctcgagc atcgcggtcc cgacgatgag
     5821 cggcgtgaag gcgaatatga tcattgcccc ggtcaccagc atcgcccatc cgaacaaggg
     5881 gatccgattg agcgtcatcc ccggggcccg cacccggagg atggccacga tcatctccgc
     5941 ggccgctccg atcgccgcga tctctgccac gctcagcccg atgtcccaga agtccatgtt
     6001 gagaccgggt gagtattcga ggttggtcag gggaacgtag gcaaaccagc cgccgtctgg
     6061 tgcgacaccg tagagaaagc tcgagtagag gagaatgccc ccgaataggt aggtccagta
     6121 gcttagcgcc gtcatcctgg gaaagggcag gtcgcgggtt ccgagcagca ggggcagtat
     6181 atagttggcc agcgcctcga tgaacggaat aacgaagagg aacatcatcg tcgtgccgtg
     6241 catggtgaag atctggttat aggtctccgc gtcgaggaaa gtgttctccg ggctgccgag
     6301 ctggatccgc aaaaggagtc ccagcaggcc gccgagcacg aaaaaggtga agccggtgat
     6361 catgtagcgc ttggcgatgg gaacgttgtt gacttcggcc agaagcccac ggatgccacg
     6421 aggcgtggcc caggtccgtt tgaactcctc cactgtggcg ggcggagccg gcgaggcctg
     6481 ggcggtagcc ataggggacg actagcgcag ggagcccagg taggcgagta gcgactgcag
     6541 ctccttcggc tggagcagag t
//
LOCUS       DASYRV010000602         5231 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_796312, whole genome shotgun sequence.
ACCESSION   DASYRV010000602 DASYRV010000000
VERSION     DASYRV010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5231
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_796312"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..249)
                     /locus_tag="VGQ24_15945"
     CDS             complement(<1..249)
                     /locus_tag="VGQ24_15945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456385.1"
                     /translation="MKRVLAVVGGLFALVLVLLLVLPMLFRDRIAQRVKTAVNQNVNA
                     RVDWRDVGLSFFRHFPNLTLTLDDLTAVGVERFQSDTLA"
     gene            424..3054
                     /locus_tag="VGQ24_15950"
     CDS             424..3054
                     /locus_tag="VGQ24_15950"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEV8456386.1"
                     /translation="MSDRIAAALSDRYMLERELGQGGMAIVYLAQDLRHDRRVALKVL
                     RPELAAVIGAERFLAEIKTTAYLQHPHILPLFDSGAADGFLYYVMPFVEGESLRERLQ
                     RERQLPIADALRIAAEVAGALDYAHRHGVIHRDVKPENILLHDDSALVADFGIARAVS
                     RAGGTRMTETGMSVGTPHYMSPEQAMGEREITARSDVYALGAVTYEMLTGEPPFTGPT
                     AQAIVARVLTEEPRPLIPQRHTIPRQVEAAVLTALEKLPADRFGSTMDFVAALTAREG
                     TIAAAPRLAPEMQSRWWRSPVAMALLVIGVALGAFFLGSHTARRTAAPLELGQSLQVT
                     SEPGLEVQPAISPDGRSVAYAAGSSADTRIYLRQVAGGRVTPLTDDTTASQANPRWSS
                     DGTRILFLAQNAVFSAPASGGAARQEIPAPRERSVTSADWAPDGRRIAYTVGDSLFVR
                     DTSGTSRGVSRISEPSLCSWSPDGTLIACASGNATYLLVGNELGNLSPNRIVICRVRD
                     GAVATVTDSISLNVSPVWSPDARWLYYVSNRRGPRDLYALRITRSGQASGQPVRLSTG
                     LGAQSISISANGSRFAYAVYSDKANIWSLPLPSRPPSSTAAATPVTTGSQVIEDVRLS
                     RDNRWLYYDSDRAGNADAYRLPVAGGEPERLTTDPSDDFAPDPSPDNREVAFHSWRSG
                     SRDIYVLPLDGRPLQRVTSSPEQEFIAVWSPDGSTLAYQSGYLEGSIWLVRRDGNNVW
                     GKPVRRVPSGLWPAWSPDGKRLVYASGRGGGSLKVIAVESGAPQVVLNADQPGRPRAE
                     WPYWSADGRTIYFKSHDAKGHASIWSIPSTGGTPRLLVRFDDPLRPSYRSQWAIGGNR
                     IYVPIQDRQSDVWIMETESP"
     gene            3125..3625
                     /locus_tag="VGQ24_15955"
     CDS             3125..3625
                     /locus_tag="VGQ24_15955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456387.1"
                     /translation="MTARSATAPSRVADSSLDMGTKLIALAGIGLVGYGIMFLIRNFT
                     GFIELGLTPQHIGGTPEQIEAANPRLFHYVSHLQVAVAAFIIALGVAVIPLALRGVRT
                     GQSWALWTAFLAPVIGVGIALPLHYVYGFATMGHLGLIYLDAVILLIGTVLAYKGLNR
                     SAMKVP"
     gene            3780..4847
                     /locus_tag="VGQ24_15960"
     CDS             3780..4847
                     /locus_tag="VGQ24_15960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456388.1"
                     /translation="MLTHLAPLRRALIPFVALAAFTISSCGPDGREPTGPGLDPNLAL
                     QSQPGLAKALAAQARHTDRLLQIEGIVGTAVGLGSDGHEQVQLFTKTAGVRGLPTTLD
                     GVPVSVVVTGEIRALPAVASAPITAAAVNRTARFARPVPIGVSTGNQGECSAGTIGAR
                     VKSGTTTYALSNNHVYALENRAAIGSNVLQPGRYDLNCASGSNALLGKLSKFVSITFS
                     TSANNKVDAAIAAAPITNLGKSTPSDGYGAPSPTIIAAALNQTVKKYGRTTGLTTGSV
                     VGLNATINVGYSRGTARFVGQIVIRGKGQFSRAGDSGSLIVNGNRRPVGLLFAGSQNG
                     YTFANQIGQVLTALGVSVDGI"
     gene            4889..5161
                     /locus_tag="VGQ24_15965"
     CDS             4889..5161
                     /locus_tag="VGQ24_15965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456389.1"
                     /translation="MLLLPPLESCTPQRKDSSLPPPTVAQVLERHTPRLMSLAGVVGT
                     AEGRCAGQPCILVLVERLTPALRQSIPSELEGIPVEIRESGRIEAR"
BASE COUNT          872 a         1822 c         1668 g          869 t
ORIGIN      
        1 ggccagggtg tcgctctgga agcgctccac gccgacggcc gtgaggtcgt ccagcgtcag
       61 agtgaggttg gggaagtggc gaaagaagct gaggccgacg tcacgccagt cgacacgggc
      121 gttgacgttc tggttcaccg cggtcttgac ccgctgggcg atccggtccc gaaagagcat
      181 cggcaggacg agtagcaaca cgagaacgag agcgaatagc cccccaacaa ccgccagtac
      241 ccgtttcatc taagaaaggt ataaggggtt agaggtgaga ggttagatgc tctctcagct
      301 cttcttcccg ccttaccgcc ttaccgccct accgccttac gctccccggc attggtctct
      361 tgcgcccctg aagccgagga cggcagctta tgggcgtgac tcaccccact catagaggca
      421 gcagtgagtg accgcatcgc cgcggccctg agtgatcgtt acatgctcga gcgtgagctg
      481 ggccagggcg gtatggcgat cgtctacctc gcacaggacc tgcggcacga ccggcgggtc
      541 gccctcaagg tgttgcgccc ggagctcgcc gccgtgatcg gcgccgagcg attcctggcc
      601 gagatcaaga ccaccgcgta cctccagcat ccccacatcc tgccactctt cgactcgggt
      661 gcggccgacg ggttcctcta ctatgtcatg ccgttcgtcg agggtgagtc gctccgcgag
      721 cgactccagc gcgagcgcca gctccccatc gccgacgcgc tgcgcattgc cgccgaagtg
      781 gccggcgcgc tggactatgc ccaccgccat ggcgtcattc accgcgacgt caaaccggaa
      841 aacatcctgc tgcacgatga tagcgccctg gtggcggact tcggtatcgc gcgggcggtg
      901 tctcgggccg gcggcacccg gatgaccgag accggcatgt cggtcggcac cccgcactat
      961 atgagccccg aacaggcgat gggcgagcgg gagatcaccg cccgctcgga cgtgtatgcg
     1021 ctcggcgcag tgacgtacga gatgctcacc ggcgagccac cgttcaccgg ccccacggcg
     1081 caagccatcg tggctcgggt gctgaccgag gagcctcggc cgctgatccc gcaacggcac
     1141 accatcccac ggcaggtcga agccgccgtg ctcaccgcgc tggagaagct ccctgccgac
     1201 cgcttcgggt ccacaatgga cttcgtggcc gcactcaccg ccagagaggg cacgatcgcg
     1261 gcggccccgc gactcgcgcc ggagatgcag agtaggtggt ggcggagccc agtcgccatg
     1321 gcgttgctcg tgatcggggt ggcactcgga gccttctttc tcggcagcca caccgcccgg
     1381 aggacggcag ctccgctcga gttgggtcaa tcgctccagg taacctcgga accggggctc
     1441 gaggtgcagc cggcgatttc gcccgacgga cggagtgtgg cctacgcggc cggcagctcg
     1501 gcagataccc ggatttacct ccgccaggtg gcgggaggcc gggtcactcc gctcaccgat
     1561 gacactacgg cttcgcaggc gaatccccgc tggtcctccg acgggactcg catcctcttc
     1621 ctggcgcaaa acgcagtgtt cagcgcgccc gcgtccggcg gcgcggcgcg gcaggagatc
     1681 ccggcacccc gggagcgctc ggtcacctcg gcggactggg cgccggatgg ccggaggata
     1741 gcctacaccg taggggattc actctttgtc cgggacacct cgggcaccag tcgcggtgtg
     1801 tcccggatct ccgagccgtc gctctgcagc tggtcgcccg acggaacgct catcgcctgc
     1861 gcctcgggca acgcgaccta tctccttgtc gggaacgagc tgggcaacct ttctcccaat
     1921 cggatcgtga tctgccgggt gcgcgacggc gcagtagcga cggtcaccga cagcatctcg
     1981 ctgaacgtga gccccgtctg gtccccggac gcgcggtggc tgtactacgt ctccaaccgc
     2041 cgggggccgc gagacctcta cgcgttgcgg atcacgcgga gtggccaggc ctcgggccag
     2101 ccggtgcggc tcagcaccgg cctgggtgcc cagtcgatct cgatctcggc caacggctcg
     2161 cgtttcgcat atgcggtgta ctcggacaag gcgaacatct ggtcgctgcc gctgccgtcg
     2221 cgcccaccca gttccactgc ggcggctaca ccagtcacga ccggaagcca ggtcatcgag
     2281 gacgtacggc tctcgcgcga caaccggtgg ctgtactacg actcggaccg ggcgggcaat
     2341 gcagatgcct accgccttcc agtcgccggc ggcgagccgg agcgcctcac caccgacccg
     2401 tccgacgatt tcgcgccaga cccatcaccc gataaccggg aggtggcatt ccactcctgg
     2461 cgctcaggct cacgggacat ctacgttttg ccgctcgatg gacgcccact gcagcgggtt
     2521 acctcgtcgc cggagcagga gttcatcgcc gtctggtcac ccgatggctc gacactcgcg
     2581 taccagtcag ggtatttgga ggggtcgatc tggctggtcc ggcgcgacgg gaacaacgtt
     2641 tgggggaagc cggtgcggcg ggttcccagc ggcttgtggc ctgcgtggtc gccggacgga
     2701 aagcggctgg tgtacgccag cggtcgcggc ggaggctccc tgaaggtcat tgcggtcgag
     2761 tccggcgcgc cacaggttgt cctcaatgca gatcagccgg gacgcccccg ggcggaatgg
     2821 ccctactgga gcgccgatgg ccggaccatc tacttcaaga gccacgacgc aaaaggccac
     2881 gcctccatct ggtcgattcc atcgaccggt ggtacacccc gcctgctggt ccgattcgac
     2941 gatccgctgc gcccatccta ccggagtcag tgggccatcg gggggaatcg aatctacgta
     3001 ccgatacagg atcgccagag cgacgtttgg ataatggaga cggagtcacc atgagcacga
     3061 gaatcgccgc tccccaccgt gctgcctgac cgcaagcccc tagaccttag ccaaggagct
     3121 cccgatgacc gctcgttccg ctaccgctcc gagtcgtgtc gccgactctt cgctggacat
     3181 gggcaccaag ctgatcgcgc tcgccggcat cggactggtc ggctacggca tcatgtttct
     3241 catccgcaac ttcaccggtt tcatcgagct ggggctcacc cctcagcaca tcggtgggac
     3301 ccccgagcag atcgaggccg ccaacccgcg tctctttcat tatgtgagcc atcttcaggt
     3361 tgcggtggcc gccttcatca tcgccctcgg cgtcgcggtc attccgctcg ccttgcgagg
     3421 ggtccgaacc gggcagagtt gggccctctg gaccgccttc ctcgcgcccg tgatcggcgt
     3481 gggaatcgca ctcccgctgc actacgtcta cggctttgcc acgatggggc acctcggcct
     3541 gatctatctc gacgcggtca ttctgctcat cggaacggtg ctggcgtaca agggccttaa
     3601 tcgcagcgct atgaaagttc cgtgagcggc ggatggagca ggccaagacg cggcacgatc
     3661 gagccgtgtt ctggtggcag attgacatct caggcacccc cctatagcct ccgctgggtt
     3721 gctcccatcc gctagatgga cttttctgac ctgaacctcc ttgccgcccg aggtcgtcca
     3781 tgctgactca tctggccccg ctgcgccggg ccctgatccc cttcgtcgcc ctcgccgcct
     3841 tcaccatctc gagctgcgga cccgatggcc gggagcccac cggcccgggg ctcgatccca
     3901 acctcgccct gcagagtcag cccgggctgg ccaaggcgct tgccgcccag gcgcgccata
     3961 ccgataggct tctccagatc gaggggatcg tcggcaccgc ggtgggactc ggctcggatg
     4021 gccatgagca ggtgcagctc ttcaccaaga cggccggagt gcgcgggctc ccgacgacct
     4081 tggacggtgt gccggtctcg gtcgtggtga cgggcgagat ccgggcactg cctgccgtgg
     4141 caagtgctcc gattactgcc gccgccgtga accgcaccgc ccgattcgcc cggccggtgc
     4201 cgatcggcgt ctccaccggg aaccagggtg agtgctccgc tggcacgatc ggcgcccggg
     4261 tgaagtccgg caccacgacc tatgccctca gcaacaacca cgtctacgcg ctggagaaca
     4321 gagcagcgat cggcagcaac gtgctccaac ccggccgcta cgacctcaac tgcgccagcg
     4381 gatcgaacgc cttgctcggc aagctgagca agttcgtctc gatcaccttc tccaccagcg
     4441 ccaacaacaa ggtggatgcc gccatcgccg ccgccccaat caccaacctc ggcaagagca
     4501 cgcccagcga cggctacggc gcccccagtc caacgattat cgccgccgca ctcaaccaga
     4561 cggtcaagaa gtacgggagg acgacgggcc tcaccaccgg cagcgtggtc ggcctcaacg
     4621 ccacgatcaa cgtgggctac agccggggaa ccgcgcggtt cgtgggacag atcgtgatcc
     4681 ggggcaaggg ccagttctct cgcgcgggcg actccggctc cctgatcgtg aacgggaatc
     4741 gccgcccggt cgggctgctc ttcgccggca gccagaacgg ctacaccttc gccaaccaga
     4801 tcggccaggt cctcaccgct ctgggcgtct cggtcgacgg catctgatca gattttggac
     4861 ccggctccac gcgggagggc tcaccctggt gctgcttctc ccgccactgg agtcttgcac
     4921 gccgcaacgc aaggatagct ccctgccgcc acccaccgtc gcccaggtcc tcgagcgtca
     4981 caccccgcgt ctgatgtcgc tggccggggt ggtcggcacg gcggagggga ggtgcgccgg
     5041 ccagccgtgt atcctggtgc tggtcgagcg gctgacaccg gcgctgcgac agtcgatccc
     5101 atccgagctg gaggggatcc cggtggagat ccgggagtcg ggacggatcg aagcgagata
     5161 gagtcgccag tcatcgcgag ggcccgaagg gccccgaagc catccggcag ccgcccggac
     5221 ccactggatc t
//
LOCUS       DASYRV010000603         2423 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_796320, whole genome shotgun sequence.
ACCESSION   DASYRV010000603 DASYRV010000000
VERSION     DASYRV010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2423
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_796320"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..789
                     /gene="ftsA"
                     /locus_tag="VGQ24_15970"
     CDS             <1..789
                     /gene="ftsA"
                     /locus_tag="VGQ24_15970"
                     /inference="COORDINATES: protein motif:HMM:TIGR01174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEV8456390.1"
                     /translation="RLEAEVYLVTVLSSAIQNLRKCVERAGFQIGEFVLEPLAASLAV
                     LTSDERELGCAIVELGGGSTNVSIFQGGKIRHTASSVFAGGHVTNDIVHGLQVTQQEA
                     ERLKDRFGAAYEPLAGDHDVFQLPSTPGQGTRTAHRRVLAHIMHMRLQEVFELALDEI
                     SRTGYRQRLPAGVILTGGGAQAPGIVELAREVFVLPVRVGAPGQGLSGLVDSVDTPRM
                     AVPAGLLLYGAKEAMATGGFAAGRRSPAVEKVFGPVKRWLQDFF"
     gene            809..2002
                     /gene="ftsZ"
                     /locus_tag="VGQ24_15975"
     CDS             809..2002
                     /gene="ftsZ"
                     /locus_tag="VGQ24_15975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEV8456391.1"
                     /translation="MIFELDESIAQHARMKVIGIGGGGSNAVNRMIEERLVGVEFISV
                     NTDAQALSKSKSDMKVQIGKKLTRGLGAGARPEIGRQAIEENRDEVLAAIQGADLVFV
                     TCGMGGGTGTGAAPMIAQMARDIGALTVGIVTKPFLFEGQRRMKQAETGIMEMRRGVD
                     TMIVVPNERLMAVVGKGFKFEDALKKADEVLLNATQGIADLITRTGLINVDFADVRTV
                     MQNGGSALMGTGIGKGENRALEAAQQAISSPLLDNISIAGATGVLINITSSDITMGEV
                     TQISEIIHDAAGDQAEIIFGSCTEPTLGGEIRVTVIATGFDRAITGEQTPARGPGVLQ
                     FPEKRRAVAGGGTVGGGTGGPVGAVASTPRTVTPRSSAPAKGPSGLPEVSDMEIPTFI
                     RRQMD"
     gene            2002..>2423
                     /locus_tag="VGQ24_15980"
     CDS             2002..>2423
                     /locus_tag="VGQ24_15980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456392.1"
                     /translation="MRWLRITAALAVLAAAALFALSGRWPWRRLEVVAPPAPVVSALL
                     ESSDTLRSGETLPELLGRQGLEGEELTGVLERAGLDPRRLRAGLVIQFRRRQPDPVPS
                     EIAIRMGPEERLAARLEAGAWNAERHPVAWRSEVVRIEG"
BASE COUNT          421 a          758 c          868 g          376 t
ORIGIN      
        1 cggctcgagg ccgaagtgta tctggtgacg gtgctctcca gcgcaatcca gaatctgcgc
       61 aagtgcgtcg aacgagccgg ctttcagatc ggcgagttcg tgctggagcc cctggcggcc
      121 tcgctcgcgg tgctcacgtc cgacgaacgc gagctgggct gcgcgatcgt cgagctgggt
      181 ggcggatcga ccaacgtctc gatctttcag ggcggcaaga tccggcacac ggcgagctcg
      241 gtattcgcgg gcgggcacgt caccaacgac atcgtgcacg ggctgcaagt cacccagcag
      301 gaggccgagc ggctcaagga tcgcttcgga gcggcgtacg agccgctcgc gggcgaccac
      361 gatgtcttcc agctgcccag cactccgggc cagggaaccc gtacggcaca ccgccgggtg
      421 ctcgcgcaca tcatgcacat gcggttgcag gaggtcttcg agctggcgct ggatgagatc
      481 tcccgtaccg gctaccgcca gcgactgccg gccggcgtga tcctgaccgg cggtggggcg
      541 caagcccccg gaatcgtcga gctggcgcgc gaagtgttcg tgctcccggt gcgcgtgggg
      601 gcacccggcc agggtctttc cggactggta gacagcgtcg ataccccgcg catggcggtt
      661 cccgcgggac tcctgctgta cggcgcgaag gaagcgatgg ccacgggagg atttgccgcc
      721 ggacgacggt cgccggcggt tgaaaaggtg tttggcccgg tcaaacgatg gctccaggac
      781 ttcttctgag aatgcgaggg ctggcttcat gatcttcgaa ctcgacgaga gcattgcgca
      841 acacgcccgg atgaaggtga tcggcatcgg aggcggaggt agcaacgccg tcaaccggat
      901 gatcgaggag cgcctggtcg gggtggagtt catctcggtg aacaccgatg cgcaggcact
      961 ctcgaaatcg aaatccgaca tgaaggttca gatcggcaaa aagctcacgc gcggacttgg
     1021 cgccggagcc cgtcccgaaa tcgggcgcca ggcgatcgag gaaaaccgcg acgaggtgct
     1081 cgccgcgatc caaggggccg acctcgtctt cgtgacctgc gggatgggcg gaggaaccgg
     1141 aacgggggcg gcgcccatga tcgcgcagat ggcgcgcgac atcggtgcgc tcactgtggg
     1201 catcgtcacc aagccgttcc tcttcgaggg ccagaggcgc atgaagcagg cggagaccgg
     1261 catcatggaa atgcgccgcg gcgtggatac catgatcgtg gtgccgaacg agcggctgat
     1321 ggctgtggtg ggaaaaggat tcaagttcga ggacgccttg aagaaggcgg atgaggtgct
     1381 gctcaatgcg acgcagggta tcgccgacct gatcacccgg accggcctga tcaacgtcga
     1441 cttcgccgac gtgcgcaccg tgatgcagaa cggcgggtcg gccctcatgg ggacgggcat
     1501 cggcaaggga gaaaaccgcg ccctcgaggc tgcccagcag gccatttcga gcccgctgct
     1561 cgacaacatc tcgattgcgg gggcgaccgg ggtgctgatc aacatcacca gcagcgatat
     1621 cacgatgggt gaggtgaccc agatcagcga gatcatccac gacgccgccg gggatcaggc
     1681 cgagatcatc ttcgggtcct gcaccgagcc gaccctgggc ggcgagatcc gggtgacggt
     1741 gatcgcgacg ggcttcgatc gcgccatcac cggggagcaa acgcccgccc gcgggccggg
     1801 cgtactgcag ttccccgaga agcgccgcgc ggtcgccggg ggcggcacgg tgggcggggg
     1861 taccggaggc cccgtgggag cggtagcttc gactccgcgg acggtgaccc ctcgcagctc
     1921 ggcacccgcc aagggcccga gcgggcttcc ggaagtttcc gatatggaga tacccacgtt
     1981 catccggcgg caaatggatt gatgcgctgg ctccgcataa ccgcagctct cgccgtcctt
     2041 gcggccgccg cgctattcgc gttgagcggc cgctggcctt ggcggcgact ggaggtcgtg
     2101 gctcctcccg ctccggttgt ctcggcgctc ctggaaagca gtgacacgct ccggtccgga
     2161 gagaccctcc cggagctgct cggtcgccaa ggtctcgagg gagaggagct gaccggcgtc
     2221 ctcgagcgcg ccgggctcga cccgcgccgc ctgcgcgcag ggctggtgat ccagtttcgg
     2281 cggcggcagc cggatccggt tcccagcgag atcgccatcc gtatgggacc cgaggagcgt
     2341 ctcgccgccc gcttggaagc aggggcctgg aacgcggagc ggcatccggt ggcgtggcgc
     2401 tccgaggtcg ttcgcatcga agg
//
LOCUS       DASYRV010000604         4514 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2438103, whole genome shotgun sequence.
ACCESSION   DASYRV010000604 DASYRV010000000
VERSION     DASYRV010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4514
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2438103"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            174..1274
                     /locus_tag="VGQ24_15985"
     CDS             174..1274
                     /locus_tag="VGQ24_15985"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEV8456393.1"
                     /translation="MPWRYLIGIVALGACAEKKAPPAPPVPVTVATAERRAVPLELPA
                     TGTVEPLQTVSVQAQVSGILQRVAFKEGDEVKQGQVLFQLDPRPYRAALDQASAVLAR
                     DRALATNTAQDAKRYEALVQKEYVTSQQYDQARTTAASAEATVAGSQAAVDQARLNLQ
                     YATIRAPISGRTGSLLVREGNLVRGTTSEPLVTINRLRPILVRFAVPADNLPLIQAHL
                     GKDLVVRAEPSGGAGGPSEGTLSFVDNAVDSTTGTILLKGRFLNDDGSLWPGGFVNVR
                     LQVYVEPDALVIPAAAVVSGQQGSFVFVIQRDSSAATKAVRVTRTAGDFAVVSGDVQP
                     GDRVVIDGQLRLRQGSKVQIKATADTTRLGAL"
     gene            1271..4405
                     /locus_tag="VGQ24_15990"
     CDS             1271..4405
                     /locus_tag="VGQ24_15990"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEV8456394.1"
                     /translation="MNFTGLFIRRPVMTTLVMAGILIFGLVAYRQLPVSDLPAVDYPT
                     ISVSASLPGASPETMASSVATPLEKQFSTIPGVETMTSTSTLGSTSITLQFALTRNID
                     AAAQDVQAAISQAGRQLPQEMLPPSFRKVDPSSSAILYFALRSTTLPLPQLDEFAETF
                     LGQRLSTVDGVAQVQVFGSMKYAVRIQLDPQQLTARSIGIDEVSLAVENGNVNLPTGT
                     LWGTDKAYSVVSQGQLTNATGFGAMIVAYRDGAPVRLRDLGRVIDSVQDTKQASWYNG
                     ERAIVLAIQRQPGTNTVAVADRVKAEVEELRPQLPASVEIATLYDRSQTVKSSVRDVK
                     FTLFLALCLVVMVIFLFLRNLRATMIPSLALPMSLVGTFAVMHLLGFSLDNLSLMALT
                     LAVGFVVDDAIVVLENIVRHIEQGESVMEAALNGSREISFTVVSMTLSLVAVFIPVLF
                     LGGLIGRLFQEFAVTIGIAILVSGFVSLTLTPMLCSRWLKHHPENERHGRLYLTIERA
                     WEKSLGGYERSLAWVMDHRPLAMDFMAVILVGTVVLGRIVPKGFIPSEDQSQLSGTTE
                     TAEGTSYDAMVKHQQSAAAIVQEDPNVEGFMSAVGGGGRSTTVNQGRLFIHLKPRNER
                     PLSADEVAQSLTRKLGAVPGLRVYLQNPPVINIGGRSSKSQYQFTLYGSDVDALYQGA
                     AALEQRLHDVPGLTDVTSDLQIKNPQVQVNIDRDRAAALGIDVNQIENALYNAYGARQ
                     VSTIYTPNDQYWVVMELLPQYQRDLSAMNLLHISGRQGVSVPLGSLAQVTPSTGPLTV
                     NHSGQLPSVTLSFNLQPGTSIGTAVDRVEVVARQVLPSTISTSFAGTAQAFQDAQQGL
                     LVLLVLAILVIYLVLGILYESFIHPLTILSGLPFAGFGALLALVIFRLDLSIYAFVGI
                     IMLVGIVKKNAIMMIDFAIERERREHTTARKAILEAASVRFRPIMMTTMAALVGTLPI
                     ALGHGAGAESRRPLGVVVVGGLLFSQLITLYITPVVYTYLDAWQQRLARGKAKEPKEF
                     REPARGKAAAAEAT"
BASE COUNT          777 a         1508 c         1426 g          803 t
ORIGIN      
        1 gcgcgggccc agcacgttct tgtccggttg gagtggaaca cctcgctcgc gcagcttgcc
       61 cacgatgccg gcgtcctcga tccgcgcggc ggaagctcgc tgcgcctcac ccgggactcc
      121 gtacccgaga tgccaccacg atgaggatcc cgttgaggtt tggtaccgcg accatgccct
      181 ggagatatct gattggcatc gtggccctgg gagcctgtgc cgagaagaag gcgcctcccg
      241 caccgccggt tccagtcacg gtcgccaccg ccgagcggcg ggcggtcccg ctcgagcttc
      301 cggcaactgg aaccgtcgag ccgttgcaga ccgtatcggt acaggcccag gtgagcggca
      361 tcctgcaacg cgtggccttc aaggagggtg acgaggtaaa gcaggggcag gtgctcttcc
      421 agctggaccc tcgcccgtat cgggccgcgc tcgaccaggc gagtgccgtt ctggcgcggg
      481 accgcgccct ggcgaccaat accgcgcagg acgcgaagcg ttacgaggca ttggtgcaaa
      541 aggagtacgt gacgtcgcag cagtacgatc aggctcgaac cactgccgcc tccgccgagg
      601 ccacagtggc cggcagccag gcggccgtgg atcaggcgcg gctcaacttg cagtacgcca
      661 ccatccgcgc cccgatctcc ggacgcaccg gcagtctcct ggtccgcgaa gggaatctgg
      721 tgcgcgggac cacgtcggag ccgctggtca cgatcaaccg gctccggccc atcctggtcc
      781 gcttcgcggt cccggccgac aatctgccgc tcattcaggc acacctcggc aaggatctgg
      841 tcgtgcgcgc cgagccgtcc ggtggagcag gcggcccgag cgagggcacc ttgagcttcg
      901 tggacaacgc ggtggattcg accaccggca cgatcctgct caaggggcgc tttctcaacg
      961 acgatggctc gctctggcct ggtgggttcg tcaacgtccg gcttcaggtc tatgtcgagc
     1021 cggacgccct ggtcatcccg gccgcggcgg tggtgtccgg acagcaggga agcttcgtgt
     1081 tcgtaattca gagagacagt tcggcggcaa cgaaggccgt gagggtgacc cggaccgcgg
     1141 gggacttcgc cgtcgtgagc ggcgatgttc agccgggcga ccgggtcgtc atcgacggtc
     1201 agctgcgcct gcgccagggg tcgaaggtac agatcaaggc caccgccgac acaacacggc
     1261 tgggagcgct atgaacttca ccggactctt cattcggcgc cccgtcatga ccaccctggt
     1321 catggcgggc atcctgatct ttggcctggt agcctaccgg cagctcccgg tgagcgatct
     1381 gccggcggtg gactatccta ccatctcggt gagcgccagt ttgccgggcg ccagtcccga
     1441 gacgatggcg tcctcggtgg caaccccgct ggaaaaacag ttctctacca tccccggcgt
     1501 tgagacgatg acctcgacca gcaccctggg tagcacctcc attaccctgc agtttgcgct
     1561 gacccgcaac atcgacgccg ccgcccagga cgtacaggcc gccatctcgc aggcgggccg
     1621 ccagcttccc caggaaatgc tgcccccgag cttccgcaag gtcgatccgt cgtcatcggc
     1681 gattctgtac ttcgcactgc gaagcacgac gttgccgttg ccgcagctgg atgaattcgc
     1741 ggagaccttc ctgggtcagc ggctctcgac ggtcgacggg gttgcccagg tccaggtgtt
     1801 cggatcgatg aagtacgccg tgcggatcca gctcgatccc cagcagctca cggcccgcag
     1861 catcgggatc gacgaggtca gcctggccgt ggagaacggc aacgtgaacc tcccgaccgg
     1921 aaccctgtgg ggcaccgata aggcctattc ggtggtgagc cagggccagc tcaccaacgc
     1981 caccggcttc ggtgccatga tcgtggctta tcgcgacggt gcgccggtgc gcctgcggga
     2041 cctgggccgg gtgatcgaca gcgtgcagga caccaagcag gccagctggt acaacgggga
     2101 aagggccatc gtcctcgcca ttcaacgcca gccgggcacc aacacggtcg cggtggcgga
     2161 ccgggtcaag gccgaggtag aggaactgcg gccgcagctg cccgcctcgg tcgagatcgc
     2221 gaccctctat gaccgatccc agacggtcaa gtcgtcggtt cgggacgtga agttcactct
     2281 gttcctggcc ttgtgcctcg tcgtgatggt gatctttctg ttcctccgca acctccgcgc
     2341 gacgatgatc ccgagcctgg cgctccccat gtcgctggtc gggacctttg cggtgatgca
     2401 cctgctcggc ttcagcctcg acaacctctc cctgatggcg ctcaccctgg ccgtcggctt
     2461 cgtggtggac gacgcgatcg tggtactcga aaacatcgtc cgccacatcg agcagggaga
     2521 atcggtgatg gaggcggcct tgaacggcag ccgcgagatc agcttcacgg tcgtttcgat
     2581 gaccctgtcc ctcgtcgcgg tgttcatccc cgtgctcttc ctgggtgggc tcatcgggcg
     2641 cctgtttcag gaattcgccg tcaccatcgg gatcgcgatt ctggtctccg gcttcgtgtc
     2701 cctcaccctc acccccatgc tttgcagccg ctggctcaag caccaccctg agaacgagcg
     2761 gcacgggcgc ctgtacctga ctatcgagcg cgcctgggag aaatcactcg gtggctacga
     2821 gcgctcgctc gcctgggtga tggaccaccg ccccctcgcg atggacttca tggcggtgat
     2881 cctggtgggt acggtggtgc tgggacggat cgtccccaag ggattcattc ccagcgagga
     2941 ccagagccag ctatccggca cgaccgagac cgccgaggga accagctacg acgccatggt
     3001 aaagcaccag cagtccgcgg cggcaatcgt gcaggaggac cccaacgtcg aggggttcat
     3061 gtccgccgtg ggcggcggcg gccgcagtac cacggtgaac cagggacgcc tcttcatcca
     3121 ccttaagccg cggaacgagc gacctctgag tgccgacgaa gtagctcagt cgctcacccg
     3181 gaagcttggc gcggttccgg ggcttcgggt ttacctgcag aacccgccgg tcatcaacat
     3241 cggcggccgc tcgtccaaga gccaatatca attcacgctg tatggctccg acgtggacgc
     3301 attgtatcag ggcgccgcgg cgctggagca gcggctgcac gatgtgcctg gcctgaccga
     3361 cgtcaccagc gatctccaga tcaagaatcc acaggtgcag gtgaacatcg atcgagaccg
     3421 ggccgccgcg ctggggatcg acgtcaatca gatcgagaat gcgctctaca acgcatacgg
     3481 cgcgcgccag gtcagtacca tctatacgcc caacgatcag tactgggtgg tcatggagct
     3541 gctgccccag taccagcgcg acctctcggc catgaacctg ctccatatca gcggccgcca
     3601 gggggtgtcg gtccccttgg gcagcctggc tcaggtaacc ccgtcgacgg gtccgctgac
     3661 ggtgaaccac tcggggcagc tcccctcggt gaccctctcg tttaacctcc agccgggcac
     3721 ctcaatcgga accgcggttg accgggtgga ggtagtcgcg cgacaggttc taccctccac
     3781 catcagcacc agctttgccg gcacggcgca ggccttccag gacgctcagc aaggattgct
     3841 ggttctgctg gtgctggcca tcctggtgat atacctcgtg ctcggcattc tgtatgagag
     3901 cttcatccat ccgctcacga tcctctccgg tcttcccttt gccgggttcg gggctttgct
     3961 ggcactggtg atcttcaggc tcgacctcag catctacgcc ttcgtcggga tcatcatgct
     4021 ggtcggcatc gtcaagaaga acgctatcat gatgatcgac tttgccatcg agcgcgagcg
     4081 gcgagagcac accaccgccc ggaaggccat tctggaggcg gccagcgtgc ggttccggcc
     4141 catcatgatg acgaccatgg cagccctggt cggtaccttg ccgatcgcac tgggccacgg
     4201 cgccggcgcc gagtcccggc gtcccctcgg cgtggtcgtg gtgggaggcc tgcttttctc
     4261 ccagctcatc acgctctata tcaccccggt ggtctatacc tatctcgatg cctggcagca
     4321 acggctcgct cgaggaaagg ccaaggagcc gaaagaattc cgcgagccgg ccaggggaaa
     4381 ggcggccgca gcagaggcaa cctgatgcgg ctgcgtcaac tcgtcttcca ttcgatgttg
     4441 accagcgcca cgccgaccag aatgaccagc gccgcgatca ccgtcctgcc ggtcacgggc
     4501 tcatcgagga tcgc
//
LOCUS       DASYRV010000605         3013 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2678278, whole genome shotgun sequence.
ACCESSION   DASYRV010000605 DASYRV010000000
VERSION     DASYRV010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3013
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2678278"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..279
                     /locus_tag="VGQ24_15995"
     CDS             <1..279
                     /locus_tag="VGQ24_15995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456395.1"
                     /translation="EAFRVLRPGGRLGISDVIADDGTDSAQLAESEQWAGCVSVTQPQ
                     YRDLLLTAGFTTMSITSTYQAGPGLHSAIIQAAKPAASTHDYPGPPAG"
     gene            483..1274
                     /locus_tag="VGQ24_16000"
     CDS             483..1274
                     /locus_tag="VGQ24_16000"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEV8456396.1"
                     /translation="MTERLRVRQIDDDEGRRLVRIIRRGSGSVVTWRRAQMVLLSAQG
                     MDVAAIAKVAFTSEDRVRDVIHNFNADGFGSLYPRYRGGHPPKFTLGQRREIKKIAKS
                     KPAEHDLPFSTRSLSKLAEFLVAEGMVDDISHEGLRALLREEGVTFQRIKTWKASKDP
                     DYAVKKARVEHLYAIADREVIPEPGEPEVIFCVDEFGPMNLQPHPGGSGRWSAARTKS
                     PAVRPGPDARHLHPRPRGAAPVRRHELGEDKLYGHIKPRRTALGS"
     gene            1189..1584
                     /locus_tag="VGQ24_16005"
     CDS             1189..1584
                     /locus_tag="VGQ24_16005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456397.1"
                     /translation="MRHLFAATSWAKTNCTGTSSRAEPLSVPEFCRYLRSLYPPDVRI
                     AIICDNFSPHLTTRKDKRVAQWAAASKAEIAYTPTNSSWLNRAEALDGTDHATHQEHA
                     SMIRRYIIWRNNHAYDERLCRIVDRANVA"
     gene            complement(1602..2126)
                     /locus_tag="VGQ24_16010"
     CDS             complement(1602..2126)
                     /locus_tag="VGQ24_16010"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEV8456398.1"
                     /translation="MSELSIRLRPVIEDDLEMFRRFATEPDLIGLDWAGFRDAGAPAR
                     RLAADGYLGADDSRLMVEVEEEHTAAGFVSWRPGGYGVAKYWEIGIALLPEWRGRGIG
                     WRAQAMLCDYLFHHTPAERIEARTHVENIAEQKALEKAGFQQEGLLRSAEFRAGQWRD
                     GWLYSRLRGERSPL"
BASE COUNT          548 a         1056 c          945 g          464 t
ORIGIN      
        1 gaggcgttcc gggtgctgcg gcccggcggg cggctgggca tcagcgacgt catcgccgac
       61 gacggcaccg actccgccca gctggccgag tccgagcagt gggccggctg cgttagcgtc
      121 acccagccgc agtaccgcga cctgctgctc accgccgggt tcaccaccat gagcatcacc
      181 agcacctacc aggccggtcc cggactgcac tccgcgatca tccaggcggc caagccagcc
      241 gccagcacac atgactaccc cggtccgccg gctggctaga aggagcgcag gtgcgcggcg
      301 aaggtaccgc gggcgagccc gatggccgcc cacacgcgga aatcgcgacc taaaactgga
      361 caccaccccg cccagctgtc cagacctacc ctgcgaaccc cagctcagag gccactgccc
      421 tcgcaacctt caactggacg ggacactttc ccctgcgggt gctgatcgct gagactgggc
      481 cggtgaccga acggctgcga gtgcggcaga tcgacgatga cgagggacgg cggctggtgc
      541 ggattatccg ccggggcagc gggtcggtgg tgacctggcg gcgggcccag atggtgctgc
      601 tgtcggcgca gggcatggac gtggccgcga tcgccaaggt ggcgttcacc agcgaggacc
      661 gggtccgtga tgtgatccat aacttcaacg ctgatgggtt tggctcgctg tatcccaggt
      721 accggggcgg gcacccgccg aagttcacgc tgggccagcg gcgggagatc aagaagatcg
      781 ccaagtcgaa gccggccgag catgacctgc cgttttccac ccggagcctg tccaagctgg
      841 cggagttcct ggttgctgag gggatggtcg acgacatcag ccacgagggc ctgcgtgcgc
      901 tgctccgcga ggagggcgtc acctttcagc gcatcaagac ctggaaagcc tccaaagacc
      961 cggactatgc ggtgaagaag gcccgggtcg agcatttgta tgccatcgct gaccgtgaag
     1021 tcatccccga gcccggcgag ccggaggtga tcttctgcgt ggatgagttc gggccgatga
     1081 acctccagcc acacccgggc ggcagtgggc ggtggtcagc ggcaagaaca aagagcccgg
     1141 ccgtgcgccc cggcccggat gcgcgccacc tacacccgcg cccgcggggt gcggcacctg
     1201 ttcgccgcca cgagctgggc gaagacaaac tgtacgggca catcaagccg cgcagaaccg
     1261 ctctcggttc ctgagttctg ccgctacctg cgctccctct acccacccga tgtccggatc
     1321 gcgatcatct gcgacaactt ctcaccccac ctgaccacca ggaaagacaa gcgcgtcgcg
     1381 cagtgggccg cggccagcaa ggccgagatc gcgtacaccc cgacgaattc atcctggtta
     1441 aaccgcgcag aggcgctcga cggcaccgac cacgccaccc accaagagca tgccagcatg
     1501 atccgccgct acatcatctg gcgcaacaac cacgcctacg acgaacggct ctgccgcatc
     1561 gtcgaccggg caaacgtagc ttgatgcggc actagctgag ttcagagcgg cgagcgttcg
     1621 cctctgagcc ggctgtaaag ccacccgtcg cgccactgtc cggcacggaa ctcggccgag
     1681 cggagcagac cctcttgttg gaagccggcc ttctccagcg ccttctgttc cgcgatgttc
     1741 tccacatgcg tgcgggcttc gatgcgctca gccggcgtgt ggtggaacag gtagtcgcac
     1801 agcatggcct gcgcgcgcca gccgataccg cgtcctcgcc actccggcag cagcgcgatc
     1861 ccaatctccc agtacttcgc gacgccgtac ccgcccggcc gccagctcac gaaccccgcc
     1921 gcggtgtgct cctcctcgac ctcgaccatg agccggctgt cgtccgcccc gaggtagccg
     1981 tcggccgcga ggcgtcgcgc tggcgctccg gcgtcccgaa agccggccca gtccaggccg
     2041 atcaggtcgg gctccgtggc gaaccgccgg aacatctcga ggtcgtcctc gatcacaggc
     2101 ctcagccgaa tggaaagctc gctcacctca tcgctccact cggtgcacag ggtcaaatcg
     2161 atccctgaac ggcgcaagca gcctcgcaac tgtacccatc gagaccagcc ttgtgcccgg
     2221 cgccaccctc gacgacaggc gacacgagag tctcccgccg tcctcatctg acctatgagg
     2281 gccgggcccc cttccctgct ccgccacccg ccaggcgcta ccgcaaccga gcctgctaac
     2341 agacacggca gaagccatta gatgggtgtg tggccccgga ccgcgcggca cccggtgccg
     2401 gtgccggccg ccgatggtta cgttaaggct gctgaggcct tcgatcctgc ctcgcgcgcg
     2461 tgggaacctg tcgatccatt actcgtggca cgagcgtcat tcgccgcaag cgcttgcgga
     2521 gatggcctgt tggccgtcgg cggcgaggga ttcggtgggc cagttgcgtc gatcgagacg
     2581 ctcgtgctgc cgcggacctg acgtgagagc cagtcgacaa gtctcctgtg tagccccggg
     2641 ggtcgaagtc cgtgaccggt acaggaaact tgacgataag gtagcgctcg ctccagacct
     2701 cggacgattt cggggccacc tggtcggacg cgcaaaccat cagtctgacc gagacgggcg
     2761 ccccgccacc cagggatcag ttcttcccgt ggctctccgt tgacgagagc ggaaacgtcc
     2821 atgcgatctg gtacgacaca aggaacgatc ccgcctacag gatgatcgag acattccagg
     2881 ccctgtccat ggacgggggc cgaacctgga accagaccaa catcagcacc gcggcttggg
     2941 acccaggtca gtcgttcttc acatgcggat gcttcatcgg cgactacaac gcgatcgcgg
     3001 catccgacga cgt
//
LOCUS       DASYRV010000606         3758 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1191233, whole genome shotgun sequence.
ACCESSION   DASYRV010000606 DASYRV010000000
VERSION     DASYRV010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3758
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1191233"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1135
                     /locus_tag="VGQ24_16015"
     CDS             <1..1135
                     /locus_tag="VGQ24_16015"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEV8456399.1"
                     /translation="ATLRRAISYYEQAVALDSSFAPAWARLSQAHAYLYGQAKPTPEG
                     REAARLAAERALALAPNRPEGRRALGDYYGRVTDDFARALEQYTLGRRIAPRDAELLV
                     GAARAERSLGRWEAAVEHLRQAQALDPRSASMADALVLTLLYLRRYPEALQVSDRALA
                     LTPASMDVLEDKAMVYLAQGDLAGARAVLRAAPKEIEPASLAAFLGNYWDLFWALDEE
                     QQQLLLRLRPGAFDDNRATWGIVLAQTHAVRGNKTRARAYADSACADFAERLRVTPED
                     AQLHLFYGLALAYSGRKTEAIMEGERGARLGPVSSNAFDGPYFQHQLVRIYLLVGEPA
                     KALDQLEPLLQVPYYLSPGWLKIDPTFAPLRGNPRFERLVNGP"
     gene            1441..>3758
                     /locus_tag="VGQ24_16020"
     CDS             1441..>3758
                     /locus_tag="VGQ24_16020"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEV8456400.1"
                     /translation="MAGISAIRSKSGRTQRSQGADSYDGLEAVIAHLFESSPNGVGLW
                     DRDLRCLRVNKALANINGLPPEAHVGKRLGEVVPGLAGTLEPMYREVLRTGEPVVNIE
                     VSGETPANPGDQRSWQASYYPVRGDDGSIVGVGAVVVDVTESKQAESALRQSEERYRA
                     FIEQTAEAVWRAELEEPVPVTLSADEQVRRFLATGYLAECNDAMARMYGFESAREIIG
                     TRLDQLLDPADPKNLDYLAAFVRSGYRLLDAESHEWARDGSDRYFLNNLIGIVENGMM
                     CRAWGTQRDITERNWADQALRQSREQLRVALQAARMATWRWDLQSDARVWDAEFPLSW
                     NAPEGSTDGHPRAFLDQVHPDDRTRISEAVRAAVEGAGEYREEYRVVSPDGSVHWLTD
                     QGEVIRDDNGRPLYMAGACVDVTPHRQVEEQLRQVQRMDAVGRLAGGMAHETNNQMAV
                     VLGFADFILGRSDLAERVREDVEQIRKAAERTAGITSQLLAFSRRQFAHPKVLELTEV
                     VTAFEPVLRRAMANGCELQLRAALGLDLVKADPGQVEQILLNLALNACDAMPQGGRLT
                     IETANVMLTREYTKLKPGVRVQPGPYVLVAVSDTGHGMSRETLSRVFEPFFTTKAVGQ
                     GTGLGLATVYGLVKQADGYVWVYSEPGIGTTFKIYFPVIPSQEPVTPQAELPPTLGSG
                     ELVLIVEDEPDVMRMAVRALAEAGYTVLEASGGREALAILLEAGERIRLVVTDVVMPV
                     MTGRDLVSRITEVRPGLPVIFMSGYTDEDVIRR"
BASE COUNT          641 a         1225 c         1264 g          628 t
ORIGIN      
        1 ggccacactc cgccgggcaa tctcctacta cgaacaggcc gtggcgctcg actccagctt
       61 cgcacccgcc tgggcccggc tctcgcaggc gcacgcgtac ctgtatggcc aggccaaacc
      121 cacgcccgag ggccgggagg ccgcgaggct agctgccgag cgggcactgg ccctcgcccc
      181 caatcggccc gaggggcggc gcgctctcgg cgactactac ggaagggtga ccgatgactt
      241 cgcgcgggcg ctcgagcagt acaccctggg ccggcgcata gccccgcgcg atgccgagct
      301 gctcgtgggg gcggcgcggg ccgagcggag tctcgggcgc tgggaggctg cggtggagca
      361 cctcaggcaa gcgcaagcac tcgacccgcg ctccgcgagc atggccgacg ccctcgtgct
      421 gacgctgctc tatctgcggc gctacccgga ggcgctccag gtgagcgacc gcgcgctcgc
      481 gctgaccccg gcgagcatgg acgtgctgga ggacaaggcg atggtctacc tcgcccaggg
      541 tgacctcgcc ggcgcacggg cggtgctccg cgccgctccg aaggagatcg agcccgcctc
      601 gctcgcggca ttcctgggca actactggga ccttttctgg gcgctggacg aggagcagca
      661 gcagctgctt ctccggctca ggccgggcgc gttcgacgac aaccgcgcca cttggggcat
      721 agtgctggcc caaacccacg ccgtccgggg gaataagacg cgggcgcgcg cgtacgccga
      781 ttcggcctgc gccgacttcg cggagcggct ccgggtcaca cccgaggacg cacagctcca
      841 tttattctac ggcctcgccc tagcctactc gggccggaag acggaagcca tcatggaggg
      901 ggagcgcgga gcgaggcttg ggccggtctc tagcaacgcc ttcgatgggc cctacttcca
      961 gcaccagctc gtacggatct acctgctcgt gggcgagccc gccaaagccc tcgaccagct
     1021 cgagcccctg ctccaggtcc catattacct gtcccctggc tggctcaaga tcgaccccac
     1081 gttcgcgccg ctgcgaggca acccgcgctt cgaacgcttg gtgaatgggc cgtagcactc
     1141 actgtcaggc cggctgctcg atttccgctt gggttagagt tgcgcgaaaa ctttggccgg
     1201 attttctttc gcacagcgat agggcgggat ggaattcgag tcatttccgc tctagacgaa
     1261 agagtcagct tcgcggcgtt tgcctcgaaa accggtatac gctcacggtt cgaatccccc
     1321 ctgtcagtct aactcccctg gcgccaccat gcattgtggc ggcgtcttac cccaaccgag
     1381 ccctcgcctc tgcctctggc cctagtcgcc atcactgcgt ttgtgctcgg actctgcgtt
     1441 atggccggga tatcggcgat ccgcagcaag agcgggcgca cccagcgctc tcagggcgct
     1501 gattcgtacg acggcctgga ggccgtcatc gcccacctct tcgaatccag ccccaacggc
     1561 gtcggattgt gggatcgcga cctgcgctgt ctccgggtca acaaggcctt ggccaacatc
     1621 aatggcctgc cgccggaggc gcacgtcggg aagcgactgg gggaggtcgt ccccgggctg
     1681 gcgggcaccc tcgagccgat gtaccgcgaa gttctgagga ccggcgagcc cgtggtcaac
     1741 atcgaagtca gtggcgagac tccagccaac cccggtgatc agcgttcttg gcaggcgagc
     1801 tactatccgg ttcggggtga cgatgggagc atcgtcgggg tcggagcggt cgttgtcgat
     1861 gtgacagagt cgaagcaggc cgaatccgcc ctgcggcaga gtgaggagcg ctaccgcgcc
     1921 ttcatcgagc agactgctga agccgtctgg cgagcggagc tggaggagcc ggtaccggtc
     1981 accctgtctg cggacgagca ggttcgccgt ttcctggcca ccggttacct ggccgagtgt
     2041 aatgatgcga tggcacgcat gtacggcttc gagtccgccc gcgagatcat cggaaccaga
     2101 ctggaccagc tgctcgatcc ggccgatccc aagaacctcg actatctggc tgctttcgtc
     2161 cgcagtgggt accggctgct cgatgcggaa tcgcacgagt gggcccggga cggcagcgat
     2221 cgatatttcc tcaacaacct catcggaatc gtcgagaacg gcatgatgtg tcgcgcctgg
     2281 ggaactcagc gcgacatcac cgagcgaaat tgggcggacc aggcgctgcg gcagagccgg
     2341 gaacaactca gggtggcact ccaggcggcg cgaatggcca cctggcgctg ggacctgcaa
     2401 tcagacgccc gagtgtggga cgcggagttt cccttgtcct ggaatgcgcc ggagggctcc
     2461 accgacggac acccccgcgc attcctggat caggttcatc cggacgatcg tacccgcatc
     2521 tccgaggcgg ttcgcgccgc cgtagaggga gccggtgagt atcgcgagga gtatcgcgtc
     2581 gtctcacccg acggaagcgt tcactggttg accgatcagg gcgaggtcat ccgcgacgac
     2641 aatgggcgcc cgctctacat ggcgggagcc tgcgtggatg tcacccccca tcgtcaggtc
     2701 gaggaacagc tacggcaggt gcagcggatg gacgccgtcg gccggctggc cgggggcatg
     2761 gcacacgaaa cgaacaacca gatggccgtg gttctcgggt tcgccgactt catcctcggc
     2821 cggtccgatc tggccgagcg ggtgcgggag gatgtcgagc agatccggaa ggccgctgaa
     2881 cggacggccg gcattaccag ccagctgctc gccttcagcc gccgccagtt tgcccacccg
     2941 aaggtgctgg agttgaccga ggtcgtgacg gcgttcgagc cggtgcttcg gcgcgccatg
     3001 gcgaacggat gcgagctgca gctccgggcc gcgctgggat tggatctggt gaaggccgat
     3061 ccggggcaag tggagcagat cctcctgaac ctcgccctga acgcgtgcga tgccatgccc
     3121 cagggcggca ggctgaccat cgagaccgcc aatgtgatgc tgacgcggga gtataccaag
     3181 ctcaagccag gcgtccgggt gcagcccggc ccctacgtgc tcgtcgccgt gagcgacacc
     3241 ggacacggta tgagccgcga gacactgagc cgggtgttcg agccgttctt taccacgaag
     3301 gcggtaggtc agggtaccgg gctgggactg gccaccgtct atgggctggt caagcaggcg
     3361 gatggatacg tctgggtgta ctccgagccg gggatcggca cgacgttcaa gatctatttc
     3421 ccggtgattc cctcgcagga accggtgacc cctcaagcag agctcccgcc caccctaggc
     3481 tcgggcgagc tggttctcat cgtggaggac gagcctgacg tgatgagaat ggcggtgcgg
     3541 gcgctggccg aggcgggcta cacggttctc gaagcgtccg gcggccggga agcgctcgca
     3601 atcctcctcg aagcaggcga acggatccgt ctggttgtca ccgatgtggt catgccggtg
     3661 atgactggcc gcgacctcgt gagccgaata acggaagtcc gtcccggcct gccggtcatc
     3721 ttcatgtcgg gatacaccga tgaagacgtg atccgccg
//
LOCUS       DASYRV010000607         1531 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2680274, whole genome shotgun sequence.
ACCESSION   DASYRV010000607 DASYRV010000000
VERSION     DASYRV010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2680274"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            172..1340
                     /locus_tag="VGQ24_16025"
     CDS             join(172..424,424..1340)
                     /locus_tag="VGQ24_16025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612020.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HEV8456401.1"
                     /translation="MPERRRKFTPEFKDEAVKMVIETSRPIAEVAREIHVNEGTLGNW
                     VNRYRAEHVDDEPPLSISERARLRELEREVRELRMKTEFLGKSRGLLRPGVSVSAKFE
                     FIDAEKAHYPIVKMCAWAGVSTSGFYEWRDRPASATACRREELKLLIQAIFDDSDGTY
                     GYRRVHAALARQGELCSPELVRALMRQLGLQPCQPRPWRPTTTEAGDAGEIPDLVRRD
                     FTAEEPGTKLVGDITYIPTWEGWLYLATVLDCHTKACVGYALADHMRTDLVIEALEMA
                     ARNYSLADDAIFHSDRGTQYTSEAFAKKTAELGIRRSVGRTGVCFDNAQAESFNAAVK
                     VERINRTVYPTREHARKDVARYIEFRYNTKRLHSALGYRTPHEAYTEYLNRRAAA"
     gene            1342..>1531
                     /locus_tag="VGQ24_16030"
     CDS             1342..>1531
                     /locus_tag="VGQ24_16030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456402.1"
                     /translation="MTTIQLSGKRGAAQPAQRSLEVRYGDAREEHVDHHPVRIPDPSV
                     LQEPRPSPCHLADTPLAGL"
BASE COUNT          302 a          498 c          502 g          229 t
ORIGIN      
        1 gacctgcgct gacatcacag tgcgcaaaga tattcggcgc gccgcttagt tcagctacct
       61 gccgacggcg tgtagggccg tctagacgga gccgcgcgct gggtaggtgg cgtgcctccc
      121 agattccgga tagcggaccc aatagggtcc gaccggaatg gaggatgagg aatgccggaa
      181 cggcgcagga aattcacgcc tgagttcaag gacgaggccg tgaagatggt gatcgaaacg
      241 tctcgtccga tcgccgaagt ggcccgggaa atccatgtca atgagggcac gctcgggaat
      301 tgggtgaaca ggtatcgggc cgagcacgtc gacgacgagc cgccgttgag catctcggag
      361 cgggcccgcc tgcgcgagct ggagcgggaa gtccgcgagc tgcggatgaa gacggagttt
      421 ctgggaaaag ccgcggcctt cttcgcccag gagtatcggt gagcgcgaag ttcgagttca
      481 tcgacgccga gaaggcgcac tacccgatcg tgaagatgtg cgcctgggcg ggggtgtcca
      541 cctcggggtt ctacgaatgg cgggaccggc cggcctcggc caccgcgtgc cggcgggagg
      601 agctgaagct gctcatccag gcgatcttcg acgactccga tggcacctac gggtaccggc
      661 gggtgcacgc cgcgctggcc cggcagggcg agttgtgcag cccggagctg gtgcgcgcgc
      721 tgatgcgcca gctcggcctg cagccgtgcc agccacggcc gtggcggccg acgaccaccg
      781 aggccggcga cgccggggag atcccggacc tggtgcgccg cgacttcacc gccgaggagc
      841 ccggcacgaa gctggtcggc gacatcacct acatccccac ctgggagggc tggctgtatt
      901 tggccaccgt cctggattgc cacaccaagg cctgcgtcgg gtacgcgctg gccgaccaca
      961 tgagaaccga cctggtgatc gaggccctcg agatggccgc ccgcaattat tccctggccg
     1021 acgacgcgat attccactcc gaccgcggca cccagtacac ctccgaggca ttcgcgaaaa
     1081 agaccgccga actggggatc cgccggtcgg tgggacgcac cggggtgtgt ttcgacaatg
     1141 cccaggcgga atcgttcaac gccgcggtga aggttgagcg aatcaaccgt accgtctatc
     1201 cgacccggga acacgcccgc aaagatgtcg cccggtacat cgagttccgc tacaatacga
     1261 agcggctcca ctcggcactc ggctatcgga caccacacga ggcctacacc gagtacctta
     1321 accgccgcgc cgcagcatga aatgaccaca attcagctgt ccggaaaacg cggggctgcc
     1381 caaccagccc agcgcagcct cgaagtccgc tacggcgacg cccgcgagga gcacgtcgat
     1441 caccatccgg tcagaattcc agatccgagc gtgctccaag aaccccgacc ctccccatgc
     1501 catttggccg acacgccact agcgggactt t
//
LOCUS       DASYRV010000608         3720 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3298931, whole genome shotgun sequence.
ACCESSION   DASYRV010000608 DASYRV010000000
VERSION     DASYRV010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3720
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3298931"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1184)
                     /locus_tag="VGQ24_16035"
     CDS             complement(<1..1184)
                     /locus_tag="VGQ24_16035"
                     /inference="COORDINATES: protein motif:HMM:NF015662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HEV8456403.1"
                     /translation="MNFDSYRVRERADIARLVLLGAFLLLIGAFFRTQVIQHEKFQLK
                     AATNRLRPIQLTSPRGSILDRNGRVLAENVPGYSVKLLAQSTDSLRAVLARVGRFVPL
                     DSARVTDIIQRYLQARYQPALVFGDASFDIIAKLEEHRSALPGLVIQAEPKRLYPAGK
                     SIAHLVGYVSEVTEADLNADRYPGAVLGSIVGKAGLEGEYDDTLRGSEGVRYIEVNAR
                     GRLVREEAASASLPPTPGKPIVTTIDLDLQRFVDSIWPARVRGALVAMTPNGEIRALY
                     SAPTFDPNHFVGGISSAEWRSLNTDPAKPLLNRVIQARYPPASPFKLAIAAMALKRGL
                     INLNTTMPEPCRGGLRLGNRVFRCWKKEGHGTLDLTGAVAASCDVYFYQLGLRLGLDA
                     II"
     gene            complement(1181..1663)
                     /gene="mreD"
                     /locus_tag="VGQ24_16040"
     CDS             complement(1181..1663)
                     /gene="mreD"
                     /locus_tag="VGQ24_16040"
                     /inference="COORDINATES: protein motif:HMM:TIGR03426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HEV8456404.1"
                     /translation="MSRGQLALVLFLLLVLQFYLRPRLWNARVSPDFLLIGLMLFAMR
                     SGAGAGALAGFLVGLIEDTLTPARFGAAALAHTLVGYLAAWGRALFFADNMLVNAGFV
                     AVGLWLRDLIVLVVSETDHKQLLTELTFYSPIQALTTAAFALVVLATFRAVFSVRLDA
                     "
     gene            complement(1675..2688)
                     /gene="mreC"
                     /locus_tag="VGQ24_16045"
     CDS             complement(1675..2688)
                     /gene="mreC"
                     /locus_tag="VGQ24_16045"
                     /inference="COORDINATES: protein motif:HMM:NF016011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005618 - cell wall [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HEV8456405.1"
                     /translation="MTFESDRRYSRRDTVLLILCLALSLLALFSPAALSNGIAATLRE
                     TVLSPLVWLQARAEEGRTSRVRFRTVTAERDSAAYLAQFLPSLRAENERLRQLLRLSH
                     RLTTSYVSAEVLHQPQATDSRTLLLSAGSRQGVAPFNPVVAPEGLIGVILSVSRASSI
                     AMSWAHPEFRVSAFTVGGNAFGVVAPSIEGRNNEGALEFRGVPYRDSVPLGTLVLSSG
                     LGGVFPKGIPVGTVIGTVREEAGWERVYRLRPAANPGSAAHVLVLLGSRGGDLTPAFP
                     SDSLLEAIRLDSIARVRRADSVAQAVKAARAARRDSLARTSPILGGTPTGQPAPQPRD
                     SSQ"
     gene            complement(2691..3713)
                     /locus_tag="VGQ24_16050"
     CDS             complement(2691..3713)
                     /locus_tag="VGQ24_16050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEV8456406.1"
                     /translation="MHWTSWLPANEIAVDLGTANTLIYVKGEGIVLNEPSVVAIEKAS
                     GKIKGIGLEAKRMLGRTPDGILAVRPLKDGVIADFDVTEKMLRYFLKTIIDKHVFRVK
                     PKVIVCVPSGITEVERRAVRDSAETAGAKQVLMVAEPMAAAIGVGLPVETPTGNMVID
                     IGGGTTEIAVIALSGIVSDTSIRTGGDELDQAIVQFMRKNYNLLVGEPTAEAIKIKIG
                     SAAPTGDEREMEVKGRDLVSGIPKTVRVHSTEIREAVQEPIQQIVDAVRRALEITPPE
                     LASDIVDRGIVMTGGGALIRGLDLLLAQETGLPIHLDEDPLTCVVRGTGRILDDFEKY
                     RSVLSS"
BASE COUNT          645 a         1188 c         1294 g          593 t
ORIGIN      
        1 tgaatgatgg cgtcgagtcc cagccggaga cccagctgat agaagtacac gtcgcagctg
       61 gccgctactg caccggtgag atccagggtc ccgtgtccct ctttcttcca gcagcggaac
      121 acgcggttgc cgaggcgcag acctccccgg cacggttcag gcatggtcgt gttgagattg
      181 atcagccctc gcttgagagc catggccgcg atagccagct tgaacggcga cgctggtgga
      241 tagcgcgcct gaatgacgcg gttgagcagc ggcttcgcgg gatcggtgtt cagtgaccgc
      301 cactcggctg aggagatccc tcccacgaag tggttggggt caaacgtcgg tgccgagtag
      361 agcgcgcgga tctctccgtt gggagtcatc gccacgagcg ctccccggac ccgtgccggc
      421 cagatgctat cgacgaaccg ctggagatcc agatcgatcg tcgtgacgat gggctttccg
      481 ggggtgggtg ggagcgaggc agaagccgcc tcctcccgca ccaggcgccc gcgggcgttg
      541 acctcgatat agcggacgcc ttcgcttccc ctgagtgtat cgtcgtactc cccctcgagt
      601 ccggcctttc ccacaatcga gccgagcacg gcccccggat aacggtcggc attgaggtcg
      661 gcctcggtga cctccgagac gtatcccacg agatgggcga tggattttcc ggccgggtag
      721 aggcgcttgg gctcggcctg aatcaccaga ccaggcaacg ccgagcggtg ttcctcgagc
      781 ttggcgatga tgtcgaacga ggcgtccccg aagacgaggg ccggctggta gcgggcctga
      841 aggtagcgct ggatgatgtc ggtgacccgc gcgctgtcga gcggcacgaa ccggccgacc
      901 cgcgcgagca cggcccgcag tgagtcggtg gactgggcca gcagtttgac cgaatagccg
      961 ggcacgttct cggccagcac tcgtccgttg cgatcgagga tactccccct gggcgacgtg
     1021 agctgaatcg gtcggagccg gttggtcgcc gccttgagct gaaacttctc gtgctggatt
     1081 acctgagtcc ggaagaaggc tccgatcagg agcaggaacg cgcccagaag cacgagtcgc
     1141 gcgatatccg ctcgctcccg aacccgatac gagtcgaagt tcatgcgtcg agccgcacgg
     1201 agaacaccgc ccggaaggtc gccagcacca ccagcgcgaa cgccgcggtc gtcagggcct
     1261 ggatggggct gtagaacgtc agctcggtca ggagctgctt gtggtcggtt tcactcacca
     1321 ccagcacgat caggtcgcgc aaccagagcc cgacggcgac gaacccggca ttgaccagca
     1381 tgttgtcggc gaagaacagc gcacggcccc acgcagccag gtagcccacg agcgtgtgcg
     1441 ccagcgccgc cgctccaaac cgggcgggcg tgagcgtatc ctcgatcaat cccacgagga
     1501 agccggccag ggcgcccgcc cccgccccgc tgcgcatggc gaagagcatc agtccgatca
     1561 gcaggaaatc ggggctgacc cgcgcattcc agagccgggg tcggagatag aactgaagca
     1621 cgagcagcaa gaacagcacg agggccagct gacctcggct cacccgccgg gagctcattg
     1681 gctggagtcc ctgggctgtg gtgcgggttg cccggtcggg gtgccgccga ggatcggtga
     1741 ggttcgggcc agcgaatccc gccgtgcggc tctggccgcc tttaccgcct gagccactga
     1801 gtcggcgcgg cgcacccgcg cgatcgagtc cagccggatc gcttcgagca gcgagtcact
     1861 ggggaaggcg ggggtgagat cgccgccccg ggatccgagc agcaccagga cgtgggctgc
     1921 cgagccgggg ttcgccgccg gccggaggcg gtacacgcgc tcccatccgg cttcctcccg
     1981 gacggtgccg atcacagtgc ccaccggaat gcccttgggg aatacgccac ccaggccgga
     2041 ggacagcacc agcgtgccca ggggcaccga gtcgcgatag ggaactcccc ggaactcgag
     2101 cgccccctcg ttgttccgcc cctcaatcga gggggccacg acgccgaacg cgttaccgcc
     2161 gacggtgaag gcgctgaccc ggaattccgg atgggcccac gacatcgcga tgctgctggc
     2221 ccgcgagacg ctgagaatca cgccgatcag gccctctggc gccacgacgg ggttgaacgg
     2281 ggcaaccccc tggcgcgagc ccgcactgag cagcaaggtg cggctatcgg tggcctgagg
     2341 ctgatggagc acctcggcgg agacgtagga ggtggtgagc cggtgactga gccggagaag
     2401 ctgcctgaga cgctcgtttt ccgcgcggag cgagggaagg aactgggcca gatacgcggc
     2461 ggagtctcgc tctgccgtca cggtccggaa acgaacccgg ctggtgcgtc cctcttccgc
     2521 ccgggcctgg agccagacca gtggggaaag gacggtctct cgcagcgtcg ccgcaatgcc
     2581 attgctcaag gcggctggag agaagagggc cagcagggac agagccaggc acaggatgag
     2641 caggacggtg tcgcggcggg agtaacggcg atcggattcg aaggtcatgc tcaagacgaa
     2701 agaacgctgc ggtatttctc gaagtcgtcg aggatccggc cggtgccgcg cacgacgcag
     2761 gttagcggat cctcgtctag gtggatgggc aatccggttt cctgggcgag gagaagatcg
     2821 agtccgcgga tgagggcgcc gccgccggtc atgacgatgc cgcggtccac gatatcgctg
     2881 gccagctcgg gcggcgtgat ctcgagcgcc cgccgcaccg cgtccacgat ctgctgaatc
     2941 ggttcctgca ccgcttcccg gatctcggtc gaatgcacgc gtacggtctt gggaatgccg
     3001 gagacgagat cccgcccctt cacttccatc tcccgctcgt cgccggtggg agcggcggag
     3061 ccgatcttga tcttgatggc ctcggccgtg ggctccccga ccagcaggtt gtagttcttg
     3121 cgcatgaact gcacgatggc ctggtcgagc tcgtcgccgc cggtgcggat ggaggtgtcg
     3181 gagacgatgc cggagagggc gatgacggcg atctcggtgg tcccgccgcc gatgtcgatc
     3241 accatgttgc cggtgggcgt ctcgaccggg aggccgacgc cgatcgcggc cgccatcggc
     3301 tcggcgacca tcagcacctg cttggcaccg gcggtctcgg ccgagtcgcg gacggcgcgg
     3361 cgctcgacct cggtgatgcc cgacggcacg cagacgatga ccttgggctt cacgcggaag
     3421 acgtgcttgt cgatgatcgt cttgaggaag taccgcagca tcttctcggt gacgtcgaag
     3481 tcggcgatga cgccgtcctt gagcggccgg accgcgagga tcccgtcggg cgtgcggccg
     3541 agcatccgtt tggcctcgag cccgatgccc ttgatcttgc ccgaggcctt ctcgatggcc
     3601 acgaccgagg gctcgttgag gacgatgcct tcgcccttca cgtagatgag cgtgttggcc
     3661 gtgccgaggt ccaccgcgat ttcgttcgcg ggaagccagg acgtccaatg catcgaggga
//
LOCUS       DASYRV010000609         5913 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1192806, whole genome shotgun sequence.
ACCESSION   DASYRV010000609 DASYRV010000000
VERSION     DASYRV010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5913
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1192806"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..345)
                     /locus_tag="VGQ24_16055"
     CDS             complement(<1..345)
                     /locus_tag="VGQ24_16055"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HEV8456407.1"
                     /translation="MSRADNGFLLVRIGKRRVGLELSQVLGVTLLGSVHPVPSVEPAV
                     RGVAQVQGKMVPVIHLGALLEGVSCPSELGDTGVLVSVGGRCLCLEVDEAQLLVRDRA
                     LPVPQGTTLPWAF"
     gene            complement(342..1418)
                     /gene="cheB"
                     /locus_tag="VGQ24_16060"
     CDS             complement(342..1418)
                     /gene="cheB"
                     /locus_tag="VGQ24_16060"
                     /EC_number="3.1.1.61"
                     /inference="COORDINATES: protein motif:HMM:NF001965.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis-specific protein-glutamate
                     methyltransferase CheB"
                     /protein_id="HEV8456408.1"
                     /translation="MVSSISEPSRVLVVDDSPFFRRLLTEVVEASGEFRVIATARDGM
                     DALRKVRAHAPDVVLMDLEMPELDGLGAIGYIMAESPRPIVVVSAYVGAGAVMAIRAL
                     ELGAVDLVAKEEERSGAATARFAERLLTVLRAAKSADIRRLALADRPERELPPSSVPL
                     SQGRVRFCVAIAASTGGPRALAEIVPQLPTGLETAVLIVQHMPPKFTRSLAERLATQS
                     RMKVVEAEDRMPVRADTAYVAPGDFHMRVAAGSGGTHLMLDNGPPVWGVRPAADPLFA
                     SVARAFGPLAVGVVLTGIGRDGAEGLRQIHDAGGVGMAQDRETATVYGMPAAALQAGG
                     ARYVLPVGQIAAGIIGELTRLRCR"
     gene            complement(1399..1887)
                     /locus_tag="VGQ24_16065"
     CDS             complement(1399..1887)
                     /locus_tag="VGQ24_16065"
                     /inference="COORDINATES: protein motif:HMM:NF015908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheD"
                     /protein_id="HEV8456409.1"
                     /translation="MSGRELLVRVADLRVGVADDILITQGLGSCVAILLHDADARIGG
                     MAHVLLPSPALSRMDANPAKFPQSAVPRLLELMVADGAQPGRVSARLAGGASMFAALA
                     PPGTIHMGERNLVAARQVLRALGVPLVGEAVGGDFGRTVRLSVNDGRVEVITVARGIQ
                     HL"
     gene            complement(1884..2702)
                     /locus_tag="VGQ24_16070"
     CDS             complement(1884..2702)
                     /locus_tag="VGQ24_16070"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008983 - protein-glutamate
                     O-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HEV8456410.1"
                     /translation="MTADEAAFAALTRKISREAGLTLAAYKDKCLRRRIAVRMRACGV
                     KTYSDYQAVLDRLPAEYERLKDAITINVTRFYRNADTWNLLRGGLIREICQANAGEIR
                     VWSAGCSSGEEPYTLTMLIADHLEQQGTPERLRHVTVDATDIDRQCLERARAGRYRHD
                     ALTEVPAVWVERYFEQDGDECRVIERLRQRVQVRAADLSNDPPPRHNYHLILCRNVVI
                     YFERAAQERVFATFARSLAPGGFLVLGKVETLFGPARDRLTLLDPRERVYRLSA"
     gene            complement(2699..4315)
                     /locus_tag="VGQ24_16075"
     CDS             complement(2699..4315)
                     /locus_tag="VGQ24_16075"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HEV8456411.1"
                     /translation="MAIKGSLKEASLPDVIQLLYLGRRTGCLALADRHNFGTIYLDEG
                     QIVYASIVNRRDRLGDILMRNGRITPEQLQQAIDAQTDDRQHKLGEILVGKGILPQAE
                     LEEYMRIQIEEAVYFLFTWTAGTFNFEAGVRPEREDFLVRISPEFLLLEGARRVDEWS
                     LVEKKIPSFDLIFSVDQQHIGESAPELSPEQKRLLPLIDGTRDVRQLVEESGMAEFDV
                     GKALFGLITAGFAHRVGTSTAAAPKINDSRVEEHRNLGIAFYKAGMLEEGLREFRRVV
                     ELRPADSSAPLFLGLIAIRQARWEDAAEALRQAAIAGVPKPAVLHNLGFALEQLGRLD
                     EAEAAYGDAASRAREDARVMLGWSIVALKRGDNQVAQGRLARALELLKGRPVPALWYW
                     AATLASAGLEDLDAALKAARDGVAAYAENPVLQNNLAVLLELSGDVEGAEKMLRAALA
                     EDPALPQVSKNLADILYRNGRYDDAAEAYERAAKLNPELGDDLYFKLGNIAYKRRDHA
                     RARESWAQATFINPGHQLARANLEMLDLTR"
     gene            complement(4315..>5913)
                     /locus_tag="VGQ24_16080"
     CDS             complement(4315..>5913)
                     /locus_tag="VGQ24_16080"
                     /inference="COORDINATES: protein motif:HMM:NF012529.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA/Hda family protein"
                     /protein_id="HEV8456412.1"
                     /translation="THRREMQAELLRLSDALQTANRQIVLTSDRPPAEIEALDERLVR
                     RFAGGLVIDVSAPDYETRVAILRRKAEERRASFGRGVLEAVGAVAIDNVRELLGALNR
                     LIAFQAVSDTPLKPEQARALAAGLEITETAPTSDVSGGVDEFGDFLSEVSATVAQQVD
                     SWRTKVAAAILRWEGEGFRTARLEALLQQEMTTDPEQVLRQFEADVCRLQTLHAEAAE
                     LAPDLAGSAAFRDPDDLAGAEATTQRARQGAHPPPAPSPLWQLDDLVEGTGNRMAVQA
                     ARAVVGEPATRYNPLVIIGTSGVGKTHLLHAVGNALGQRVQGPVACLSAHEFTGELIE
                     AIDRDAVGPWRARYRGASAFLLDDFHLVAEKDRTQDELFVLFNFLMESGRQMIFTSAV
                     PLSELKGVEARLRTRLEGGLVVDLPAPERELRQQVLERLLQSKSGSPDPELVGYLGSR
                     PVDSIRAVHGLLQRVLNAAETQGVAPTAALARDVIEGPAPKAPRRPASRSSGVVAPAS
                     GARSREKIVWDWPDVGDRILEEWR"
BASE COUNT          984 a         2107 c         1887 g          935 t
ORIGIN      
        1 gaaagcccat ggcagcgtgg taccctgggg aaccggtaat gcacggtcac gcaccagcag
       61 ctgcgcctcg tccacttcga ggcagaggca ccgcccccca acgctgacaa ggacgccggt
      121 gtcccccagc tcggaggggc aggagacacc ctcaagcaga gcgcccaggt ggatcacggg
      181 aaccatcttg ccctgcacct gggctacacc gcgcaccgcc ggctcgactg acggcaccgg
      241 gtgcaccgat cccagcaggg tcacacccag gacctgggag agctcgaggc cgactcgccg
      301 cttgccgatt cggaccagca gaaacccgtt gtcggcgcgg ctcaccggca cctcagccgg
      361 gttaattcgc cgatgatccc agcagcgatc tgacccaccg ggagcacata ccgggctccg
      421 cccgcctgga gcgccgcggc aggcatacca tagaccgtcg cggtctcgcg atcctgggcc
      481 atcccgaccc cgccagcatc gtggatctgc ctcagccctt ccgcgccatc acgcccgatg
      541 ccggtgagca caacgcctac ggccaggggc ccaaaggcac gtgccacgct ggcgaagagc
      601 ggatccgccg ccgggcggac accccagacc ggcggcccgt tgtccagcat tagatgggtg
      661 cctcccgacc ccgcggccac gcgcatgtgg aaatcacccg gtgctacgta cgcggtgtcg
      721 gctctgaccg gcattcgatc ctccgcctcc acgaccttca tcctgctctg ggtggctaac
      781 ctctcggcaa ggctgcgggt gaatttgggc ggcatgtgct gcacaatgag gacggcggtc
      841 tccagtccag tcggcagctg cggtacgatc tccgccaggg cccggggacc cccggtcgag
      901 gccgcgattg cgacacagaa tcgcacgcgc ccctgcgaca gcggcaccga tgacggtggc
      961 agctctcgct ccggccggtc cgcaagcgcc agccgcctga tgtcggccga cttcgcagcc
     1021 cggagcacgg tcaggagccg ctcggcaaaa cgagccgtgg ccgcgccgct ccgctcctcc
     1081 tctttcgcta cgagatccac cgcaccgagc tcgagcgcac ggatggccat gactgctccc
     1141 gcaccgacat aggcgctcac caccacgatc ggccggggcg attccgccat gatgtatccg
     1201 attgccccca ggccgtcgag ctcgggcatc tcgagatcca tcagtaccac gtcgggggcg
     1261 tgggcccgaa ctttccggag cgcatccatg ccgtcccggg ccgtagcgat gacgcgaaac
     1321 tctccggaag cctcgaccac ctcggtgagg agccggcgga agaaggggct gtcgtcgacc
     1381 acgagcaccc ggctcggctc agagatgctg gataccacgc gccaccgtaa tcacttcaac
     1441 tctgccatcg ttcacgctca ggcggacggt gcgcccgaag tcgccgccca ccgcttcacc
     1501 cacgagggga accccgagag cacgcagcac ctgtctggcg gccacgaggt tgcgctcccc
     1561 catgtgtatg gtgccgggcg gcgcgagggc cgcgaacatg ctggccccgc cggcgaggcg
     1621 ggcagagacc cgtcccggtt gcgccccgtc ggccaccatc agctcgagca gccgggggac
     1681 cgccgactgg gggaacttgg cgggattggc gtccatccgg ctcagcgccg gcgagggcag
     1741 gagaacgtgg gccattcctc caatgcgagc gtccgcatcg tggagcagaa tcgccacgca
     1801 gctgccgagg ccctgggtga tcaggatgtc gtccgcgacg cccacccgga gatcagccac
     1861 ccgcaccaac agctcccggc cgctcacgca ctcaaccggt acacccgctc gcgcgggtcc
     1921 agcaacgtga gtcgatcgcg ggccgggccg aagagtgtct cgaccttacc cagcaccaga
     1981 aagcccccgg gcgcgagcga tcgggcaaat gtggcgaaca cccgttcctg cgccgcacgc
     2041 tcgaagtaga tcaccacatt gcggcacagt atgagatgat aattgtgccg gggaggtgga
     2101 tcgttgctga ggtcggccgc ccggacctgc acccgctggc gcagccgctc gatgacccgg
     2161 cattcatccc catcctgctc gaagtaccgc tcaacccaga ccgccggtac ctcggtcagc
     2221 gcgtcatgac ggtagcggcc ggctcgggcc cgctcgaggc actggcggtc gatatcggtc
     2281 gcgtcaacgg tcacgtgacg aagtcgttcc ggtgtgccct gctgttccag atggtcggcg
     2341 atcaacatgg tcagcgtgta cggctcctcg cccgacgagc agccggcact ccacacccgg
     2401 atctccccgg cgtttgcctg acagatctct cgtatgaggc cgccacggag caggttccag
     2461 gtgtcggcgt tgcggtagaa acgggtgacg ttgatcgtga tcgcatcctt gagacgctcg
     2521 tactcggccg gtaggcgatc gagcacggcc tggtaatccg agtaggtctt cacgccgcag
     2581 gcccgcatcc ggaccgcgat ccgccggcgc agacacttgt ccttgtaggc cgcgagcgtc
     2641 aggcctgcct cgcgcgagat cttccgcgtg agggcagcaa aagcggcctc atcggccgtc
     2701 atcgcgtcag gtccagcatt tcaagattcg cccgcgccag ctggtggccc gggttgatga
     2761 aggtggcctg ggcccagctc tctctggctc gggcgtgatc cctacgcttg taggcgatgt
     2821 tgccgagctt gaaatagaga tcgtcgccca gctcggggtt cagcttggct gcgcgctcat
     2881 aggcctcggc cgcatcgtcg tagcggccat tccggtagag aatatcggcc aggttcttgg
     2941 acacctgcgg caaggccggg tcctcggcca gcgccgcgcg aagcatcttc tccgcgccct
     3001 ctacatcgcc gctcagctcc agcagcacgg cgaggttgtt ctgcagcaca gggttctccg
     3061 cgtacgcggc tacaccgtca cgtgccgcct tcagcgcggc atccaggtcc tccaacccgg
     3121 cactcgccag ggtggccgcc cagtaccaga gcgccggcac cggacgaccc ttgagcagct
     3181 cgagcgcacg cgccagccgt ccttgggcca cctggttatc gcctcgtttc agcgcgacga
     3241 tgctccagcc cagcatcacc cgagcatcct ccctggcgcg gctcgccgcg tcgccatagg
     3301 cggcttccgc ttcgtccagc cggcccagtt gctccagtgc aaagcccaga ttgtgcagca
     3361 ccgccggttt gggaactccc gcgatggcgg cttgccgcag cgcctcggcg gcgtcttccc
     3421 atctggcctg gcgaatcgcg atcaggccga gaaacagggg tgcgctgctg tccgccggcc
     3481 tcagctctac gacccggcgg aactcacgca acccctcttc cagcatgccg gctttataga
     3541 aggcgatccc gagattccgg tgttcctcca ctcggctgtc gttgatcttg ggagccgccg
     3601 ccgtggaggt gcccacgcgg tgggcgaagc cggcggtgat gaggccgaac agcgccttgc
     3661 cgacatcgaa ctctgccata ccggactctt cgaccagttg gcgcacatcc cgggtgccgt
     3721 caatcagagg cagcagccgc ttctgctcgg gcgagagctc cggggccgat tcaccgatgt
     3781 gctgctggtc gaccgaaaag atcaggtcga atgacggaat cttcttctcg accaggctcc
     3841 attcatcaac ccgccgggcg ccctccagaa ggaggaactc cgggctgatc cgaaccagga
     3901 aatcttcgcg ctcgggacga acacccgcct cgaagttgaa ggttcccgcg gtccaggtga
     3961 ataggaagta cacggcctcc tcgatctgga tgcgcatgta ctcctccagc tcggcctgag
     4021 ggaggattcc cttccccacc aggatctccc cgagcttgtg ctgccgatcg tcagtttggg
     4081 catcgatggc ctgctgcaac tgctccggcg tgatccggcc gttgcgcatc aggatgtcgc
     4141 ccagccggtc gcgccggttg acgatcgagg cgtacacgat ctgcccctcg tcgaggtaga
     4201 tggtgccgaa gttgtggcga tcggccagcg caaggcaccc ggtgcggcga cccaggtaca
     4261 agagctggat cacgtccgga agactggcct ccttgaggct gcccttgatg gccatcagcg
     4321 ccactcctcg aggatgcgat caccgacgtc gggccagtcc cacacgatct tttcccggct
     4381 tcgggcgccg ctggcaggcg ccaccacccc gctcgaccgg ctggccgggc ggcggggcgc
     4441 cttgggcgcc ggcccttcga tcacgtcgcg tgcgagcgcc gcggtcgggg caacgccctg
     4501 ggtctccgcg gcgttgagca ctcgctggag caggccgtgc accgcgcgga tcgaatcgac
     4561 cggccgggag cccagatagc ccaccagctc cggatcggga gagccggact tggactgcag
     4621 cagacgctcg agcacctgct ggcggagctc ccgctcggga gcgggcaaat ccacgacgag
     4681 tccgccttcg agccgggtgc ggagccgcgc ctcgacgcct ttcagctccg acaaggggac
     4741 agccgacgta aagatcatct gccgtcccga ctccatcaga aagttgaaga gcacgaagag
     4801 ctcgtcctga gtccgatcct tttcagccac caggtggaag tcatcgagca gaaacgcgga
     4861 ggcgccgcga tatctcgccc gccagggacc gaccgcatcg cgatcaattg cctcgatcaa
     4921 ctcccccgta aactcgtggg cgctgaggca cgccaccggg ccctgaaccc gctgtccgag
     4981 cgcattgccc accgcatgca ggagatgagt cttgcccacg ccgctggtgc cgatgatcac
     5041 cagcgggttg tagcgagttg ccggctcccc gaccacggcc cgggccgcct gcactgccat
     5101 tcgattcccg gtaccctcga ccaggtcatc caactgccag agtggcgagg gcgcaggtgg
     5161 cgggtgggct ccctgcctgg cgcgctgcgt cgtcgcctcg gcgccggcga gatcgtcggg
     5221 gtcacgaaac gcggcggagc ccgccagatc gggcgccagt tccgccgcct cggcgtgcag
     5281 tgtctggagc cggcacacgt cggcctcgaa ctgccgcagc acctgctccg gatcggtggt
     5341 catttcctgc tggagcagcg cctccagccg ggcggtgcgg aagccctcgc cctcccagcg
     5401 caggatcgcc gcggcgacct tggtacgcca cgagtccact tgctgggcca cggtggcgga
     5461 gacttcggag aggaagtcgc cgaactcgtc cacgccgccc gacacgtcgg aggtgggcgc
     5521 cgtttccgtg atctccagac ccgcggccag cgcccgggcc tgctcgggct tcaagggcgt
     5581 gtcgcttacc gcctggaagg cgatcagacg attgagggca ccgagcagct cgcgcacatt
     5641 gtcgatggcg acagcgccga ccgcctccag gacgccccgt ccaaagctgg cccgccgttc
     5701 ctccgccttc cgccggagga tcgcgacccg ggtctcgtaa tccggcgccg acacatcgat
     5761 gacgaggccg ccggcgaacc ggcggaccag ccgctcgtca agcgcctcga tctcggccgg
     5821 aggccgatcg ctggtgagca cgatctgccg atttgccgtc tggagcgcgt cgctcaggcg
     5881 gagaagctcc gcctgcatct cgcgccggtg ggt
//
LOCUS       DASYRV010000610         2425 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2682874, whole genome shotgun sequence.
ACCESSION   DASYRV010000610 DASYRV010000000
VERSION     DASYRV010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2425
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2682874"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..203)
                     /locus_tag="VGQ24_16085"
     CDS             complement(<1..203)
                     /locus_tag="VGQ24_16085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456413.1"
                     /translation="MTGEPRSATAYAPGGVGNIGPGLDILGLALAGPGDSVRAEWTDD
                     RGIRILESGHPDLPSDATRHTAGL"
     gene            complement(200..>2425)
                     /locus_tag="VGQ24_16090"
     CDS             complement(200..>2425)
                     /locus_tag="VGQ24_16090"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEV8456414.1"
                     /translation="AYIADMFQELEALAQGLRLVRELTPRTNDYLVSRGERLSARLFA
                     AALEQAGAKARYVDAGDVIQTDGVFGQASPDFARTDRNTQRILQPILARGAIPVVPGF
                     LGAAPTGDVTTLGRGGSDLTATLLARALGASRVLLWKDVPGLLTADPRVVPDARVIPQ
                     LHAREAAELAYYGAKILHPRALIPLAGRRIPIHVRPFADPASAGTEVSERAAPGKFPV
                     KALTAAGGQALITVTGNGMLGVPGIAARTFAALHGRRISVSLISQASSEHSICFSVPE
                     PFAEQARRSLLAEFQGEIARREIDGVEVSPGMATVAVVGLGMHGTPGVAAGVFSALAA
                     GGINVVAIAQGSSELNISVVVSAKEVAEAQRRIHTAFQLSRIAGGSVVRPERMELVLL
                     GYGQIGQALASLLGRVDRPTLSLQVAAVIDRSGFIFDPQGIGPRKLASLASEKRKGRR
                     LADLQNGRPATAEEAVAHIAGYALTRPVLIDLTADETGAALQQALTHGMDLVLANKRP
                     LAGRRVVSDALWQTARARGRRILHEATVGAGLPIIDTYHKLVESGDRVARIEGLLSGT
                     LGYVLSEVSAGVPFSEAVRRAKAKGYTEPDPRDDLSGIDVARKALILARLLGYPGELR
                     RNAVESLVPKWARSLPLEQFLDRLGELDAGWKRRVEAAAAEGAVLRYVAVVSPVKIAV
                     GVRSVPATSPFASIKGSDNQLVFTTARYKDNPLVITGPGAGAEVTAAGVLNDILRLAG
                     V"
BASE COUNT          409 a          830 c          823 g          363 t
ORIGIN      
        1 agacctgcgg tgtgacgggt cgcgtccgag ggcagatcgg gatggccgga ctcgagaatt
       61 cgaatgccgc ggtcatcggt ccactcggcc cgcaccgagt cccccgggcc agccagggcc
      121 agaccgagga tgtcgagacc gggaccgatg ttgcccacac cacccggtgc atacgccgta
      181 gcgctcctcg gctcaccagt catacgccgg ccagccgcag gatgtcgttg agcacgccgg
      241 ccgccgtgac ctcggcgccc gcgccgggcc cggtgatcac caggggattg tccttgtagc
      301 gcgcggtggt gaacaccagc tgattgtccg agcctttgat cgaggcaaac ggactggtgg
      361 ccggcaccga acgaacacct acggcgatct ttaccggcga caccactgcc acatagcgca
      421 ggaccgctcc ttcggccgcc gccgcctcga cccggcgctt ccacccggcg tcgagctccc
      481 ccagccggtc gagaaattgc tcgagcggga gggatcgcgc ccacttgggc accagcgact
      541 ccaccgcatt ccggcggagt tcaccgggat agccgagcag ccgagcgagg atcaacgcct
      601 tccgggcgac atctattccg gagagatcgt cccggggatc aggctcggta tagcctttgg
      661 ccttggcgcg tcgcaccgcc tccgagaagg ggactccggc ggagacctcg ctcagcacgt
      721 agccaagagt gccggagagg agtccctcga tccgggccac ccggtcgccc gattccacca
      781 gcttgtgata ggtgtcgatg atgggtagcc cggcacccac ggtcgcttcg tgcaggatcc
      841 gccggccgcg ggcccgggcg gtctgccaca aggcatcgct gaccacgcgg cggcctgcca
      901 ggggccgctt gttggcgagc accagatcca tcccgtgggt gagtgcctgc tgcagggccg
      961 ctccggtctc gtcagcggta aggtcgatca ggaccggccg ggtcagcgcg tagcctgcga
     1021 tgtgagcgac tgcctcttcg gcggtcgctg ggcgaccgtt ttggagatcc gcaagccggc
     1081 ggcccttccg tttctcggag gcaaggctcg ccagctttcg tgggccgata ccctgtggat
     1141 caaagatgaa gccggagcgg tcgatgactg ccgccacctg gagtgagagg gtgggacgat
     1201 cgacccggcc caataacgag gcgagcgctt ggccgatctg accgtagccg agcaggacca
     1261 gctccatccg ctcgggacgc acgaccgacc ccccggcaat ccgtgagagt tgaaaggccg
     1321 tgtggattcg ccgttgcgcc tccgcgacct ccttggccga cacgaccacc gaaatgttca
     1381 actccgagga gccctgcgcg atggccacca cgttgatccc gccggccgcc agagcggaga
     1441 acactcctgc ggcgacgccc ggcgtaccgt gcatacccag tccgacgaca gccaccgtcg
     1501 ccatgcccgg gctcacctcg accccatcga tctcccgccg ggcgatctcg ccctgaaact
     1561 cggccagcaa actccggcgc gcctgctccg caaacggttc gggcacacta aaacagatcg
     1621 aatgctccga ggacgcctgg gagatcagcg agaccgagat cctgcggccg tggagcgcag
     1681 cgaaggtgcg ggccgcgatc ccgggaacgc cgagcatccc gttcccggtg accgtgatga
     1741 gcgcctgccc tccggccgcg gtcagtgcct ttacggggaa cttccccggc gccgcgcgct
     1801 cggacacctc ggtccccgcg gaggcaggat ccgcgaacgg ccgtacatga atcgggatgc
     1861 gtcgtccagc cagcgggatc agcgcgcgag ggtggagtat cttggcgccg tagtaggcga
     1921 gttcagccgc ctcgcgggca tgcagctgag ggatgacccg cgcgtcgggc acgacccggg
     1981 gatcggcggt gagcaagccg gggacgtcct tccagagcag cacccgcgaa gcaccgagcg
     2041 cgcgggccag cagggtggcg gtgaggtcgg atccgcctct accgagagtc gtcacgtctc
     2101 ctgtcggagc ggcgccgagg aatccgggga caactggaat cgcgccgcgg gcgaggattg
     2161 gctgcaagat ccgctgggtg ttccggtcgg tgcgggcgaa atcgggtgac gcctgtccga
     2221 acacgccgtc ggtttggata acgtcgccgg catcgacgta cctggccttg gctccggcct
     2281 gctccagcgc ggccgcaaag agccgggcgc tcagccgctc gccccgggac acgagataat
     2341 cgttggtgcg tggggtgagc tcccgaacca ggcggagacc ctgtgccagt gcctcgagct
     2401 cctggaacat gtcggcgatg tacgc
//
LOCUS       DASYRV010000611         3868 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1193095, whole genome shotgun sequence.
ACCESSION   DASYRV010000611 DASYRV010000000
VERSION     DASYRV010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3868
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1193095"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2765)
                     /locus_tag="VGQ24_16095"
     CDS             complement(<1..2765)
                     /locus_tag="VGQ24_16095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEV8456415.1"
                     /translation="MSDAPEIRYLFIRRPIFAAVISIVVVLLGAFALFTLPINRYPLI
                     TPPSVQVSAVYPGATAEDVAAAVAAPIEQQLSGLDGLLYYKSSNASDGTMNLQVYFDL
                     SRDLDLAAVDVQNQVNLAQPQLPQEVVRQGITITKAQTDILAVIGLSSKDPQYDATYL
                     NNYARIYVIDELKRVPGVGDASGIGSQQFSMLLSLDPDRMAQLGLTVSDVQAAVQEQN
                     TTNPAGRIGREPAPPGNQLTVPVTTLGRLTDPKQFADIIVRANPDGSLVRVKDIGKVT
                     LGSQSYDLVGRVNGVPTAAIRLSLRPGANALNVKQAVVARMNELARSFPAGVTWFIPF
                     DTTPFITASIDEVAKTLFEAMALVTLVVFIFLQNWRTTLIPLLAVPVAIIGTFFGLQG
                     LGFQINLLTLFALVLAIGIVVDDAIVVIENVERIMAEEKVSPRVAADRAMGQVASALV
                     AIVLSLCAVFLPVAFLGGITGQMYKQFAITLVVAVVISGMVALTLTPALCAVLLKPDQ
                     GESRNRLFGWFNRGFGRVTERYVRSVGGVIARPSRWIAMFVVMLVLIAVLVRRVPSGF
                     IPTEDKGYFGVVLQLPDGASLQRTIAVTQKIEDYLLKQPAVAYVVNFVGLSFILGTNQ
                     TNSASMFVLLKPWDQRHGKQDQLDAVLQGTNQFLSSLNNAVAFGFNLPEIPGLGTTAG
                     LEVNLQDRSVNDIRKFAGLVNEYTQQANAQPELQGVQSLIRVNVPQVYVHVDREKVKS
                     LGVSLSEVFQTLQTMLSTLYVNDFNLYGRTYRVQLEAQSRFRQRPEDIGRLYVRGPDG
                     AMIPISSLVRTEFQGGPSLVQRFNGFTSALVTGQPKPGYSSGQMLAAVRRLADSAFAA
                     RGVGYAFSGQSYQEQAASGQAGLIFVLGLVMVFLVLAAQYESWSIPFAVLFGIPFGAF
                     GAFLGVWL"
     gene            complement(2762..>3868)
                     /locus_tag="VGQ24_16100"
     CDS             complement(2762..>3868)
                     /locus_tag="VGQ24_16100"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEV8456416.1"
                     /translation="VQRQTIPGQYEWVAQAAASKSVQVRAQVSGVIVERPYVEGTDVP
                     KGKVLYRIDPRTYQANYESAKARLAESEAQFANAERTLNRRKPLLAERAVAQQDVDNA
                     QAAYDQGHAAVLDARAAVDAAKKNYDDTFVRSEISGRAGRAIMEVGALTSGPSDQLTT
                     VDQVDPIYVYFNPSDQEVLQWRRDIAAKRLVLPRGVLDVQARLADGSVFGQTGKLNFV
                     SLVLQPSTGALQLRAEFPNPQHTLLPGQFVRVRFLGLKRNDAILVPQRAVQQGLNGAF
                     VYTLADSNKVSARPVSATAWQGTQWIIDAGLRPGDKVIVDGTQKIRPDAAVRPVAYNP
                     KSDTTLAARGDSTVIAPPSAAPPIQPRPQLGERR"
BASE COUNT          695 a         1251 c         1264 g          658 t
ORIGIN      
        1 agccacacgc cgaggaaggc gccgaaggcg ccgaatggaa tcccgaacag cacggcaaag
       61 gggatcgacc agctctcgta ctgcgccgcc agcaccagga acaccatgac cagacccagc
      121 acgaagatca gcccggcctg cccactggcg gcctgttcct gataggattg gccgctgaag
      181 gcgtagccga cgccgcgggc agcgaacgcc gaatcggcca gccggcggac ggcagcaagc
      241 atctggccgg agctgtaccc cggcttcggc tgccccgtca ccagcgcgga agtaaagcca
      301 ttgaaccgct gaaccaggct aggtcccccc tggaattcgg tgcggaccag actcgaaatc
      361 ggaatcatgg caccgtccgg gccgcgcacg tacagccgcc cgatgtcctc cggcctctgg
      421 cggaaccgcg actgcgcctc gagctgcact cggtaggtcc ggccgtacaa gttgaagtca
      481 ttcacataca gcgtcgaaag catcgtctgc agggtctgga aaacctccga cagtgagacc
      541 ccgagcgact tcaccttttc ccggtccaca tggacgtaga cctggggcac gttcacccgg
      601 atgagggact gcaccccctg cagctctggc tgggcgttgg cctgctgggt gtactcgttc
      661 accagtccgg cgaatttccg gatgtcgttg acgctgcggt cctgcaggtt gacctccagg
      721 cccgcggtgg tgcccaggcc ggggatctcg ggcaggttga agccgaaggc gacggcgttg
      781 ttgagcgagg acaggaactg gttggtccct tgcaacacgg catcgagctg atcctgcttc
      841 ccgtgccgct ggtcccacgg cttcaagagc acgaacatcg acgccgagtt ggtctggttg
      901 gtgccgagga tgaagctcag gccgacgaag ttgaccacgt acgccaccgc cggctgtttg
      961 aggagataat cctctatttt ctgagtgact gcgatggtcc gctggagcga ggcgccgtcc
     1021 ggcagttgaa ggacgacgcc gaagtagcct ttgtcttcgg tgggaatgaa gccgctcggc
     1081 acccggcgca cgagcaccgc gatgagcacc aacatcacca cgaacatggc gatccagcgc
     1141 gaggggcgcg cgattacgcc gcccaccgaa cgtacgtagc gctcggtgac ccgaccaaac
     1201 ccgcggttga accagccaaa cagccggttg cgcgactctc cctggtcggg tttcagcagg
     1261 accgcgcaga gcgccggcgt gagggtgagc gccaccatgc cggagatcac caccgccacc
     1321 acaagggtga tggcgaactg cttgtacatc tggccggtga tcccaccgag aaatgccacc
     1381 gggagaaaca cggcgcagag ggagagcacg attgccacca gcgcgctcgc cacctgaccc
     1441 atggcccggt cggcagccac ccgcggcgac accttctcct ccgccatgat ccgctcgaca
     1501 ttttcgatga ccacgatggc atcgtccacc acgatgccga ttgcgagtac caaagcaaac
     1561 agcgtgagca ggttgatctg gaagccgagt ccctgaagcc cgaagaaggt cccgatgatc
     1621 gcgaccggaa cggctaacag cgggatcagc gtggtacgcc agttctgcag gaagatgaac
     1681 accaccagcg tcaccagggc catggcctcg aacagagtct tcgccacctc gtcgatcgag
     1741 gccgtgatga acggcgtggt atcgaagggg atgaaccagg ttactcccgc cggaaagctt
     1801 cgggccagct cgttcatccg cgctacgacc gcctgcttca cgttgagcgc gttcgcgccg
     1861 ggccgtaagg acagccggat ggcggccgtg ggaacgccgt tcaccctccc gaccaggtcg
     1921 tagctctggg agccgagcgt caccttcccg atgtccttga cccggaccag cgagccatcc
     1981 ggattagcgc ggacgatgat gtcggcgaac tgcttgggat ccgtgagccg gccgagggtc
     2041 gtgaccggaa cggtcagttg gtttcccggc ggcgccggct cccggccgat gcggccggcg
     2101 ggattggtcg tgttctgctc ttgcaccgca gcctgcacat ccgacaccgt gagaccgagc
     2161 tgggccatgc ggtccggatc gaggctcagc agcatcgaga actgctgcga ccctatgccc
     2221 gatgcgtcgc cgaccccggg aacacgcttg agctcatcga tgacgtaaat tctggcgtaa
     2281 ttgttcagat aggtcgcgtc gtactgggga tccttcgagc tgagcccgat gaccgcgaga
     2341 atatcggtct gggccttcgt gatggtgatc ccctgccgca cgacctcctg gggcagctga
     2401 ggctgggcca ggttgacctg gttctggacg tccaccgccg cgaggtcgag gtcccgcgat
     2461 aggtcgaagt acacctgcag gttcatggtc ccgtcgctgg cgttggacga cttgtagtac
     2521 agcagtccgt ccagcccgga gagttgctgc tcgatcggcg ccgccaccgc cgcggcgacg
     2581 tcttccgcgg tggcccccgg ataaaccgcc gagacctgga ccgagggcgg ggtgatcagg
     2641 ggatagcggt tgatcggcag ggtgaagagc gcgaacgcgc cgagcagcac gaccacgatc
     2701 gagatgacgg ccgcgaagat cggccgccgg atgaacagat atctgatctc gggcgcgtcg
     2761 ctcatcgccg ttctcccaac tgaggcctgg gctggatggg cggcgcagcg gaaggagggg
     2821 cgatgacggt cgagtcgccc cgagctgcga gcgtggtatc gctcttggga ttgtatgcca
     2881 ccggccgcac ggcggcgtcc ggcctgatct tctgggtccc gtccacgatg accttgtcgc
     2941 ccggccggag cccagcgtcg atgatccact gggttccttg ccaggccgta gcgctaaccg
     3001 ggcgtgcact caccttgttg ctgtccgcga gagtgtagac gaaggcgccg ttcagtccct
     3061 gctgcaccgc ccgttgcggc accaggatgg cgtcgttgcg cttgaggccg aggaagcgca
     3121 ctctgacgaa ctggcccggc aacagcgtgt gctgggggtt gggaaactca gcccggagct
     3181 gaagtgcgcc ggtgctgggt tggagcacca gggagacgaa gttcagcttt cccgtctggc
     3241 cgaagacgct cccatcggcc agcctggcct ggacgtcgag cacacctcgg gggagcacga
     3301 ggcgtttggc ggcaatgtcc cgccgccact ggagcacctc ctggtctgag gggttgaagt
     3361 agacatagat cgggtccacc tgatcgaccg tggtgagctg gtcactcggt cctgaggtga
     3421 gcgcaccgac ctccatgatg gcgcgcccag cccgcccgct gatctcggac cggacaaagg
     3481 tgtcgtcgta gttcttcttc gccgcgtcca ccgctgcccg ggcatcgagc accgccgcat
     3541 ggccctggtc ataggccgcc tgggcgttgt cgacgtcctg ctgggccacc gcccgctcgg
     3601 cgaggagcgg cttgcgccgg ttcaaggtgc gttcggcatt ggcgaactgc gcctcgctct
     3661 ccgccagcct tgccttggcg ctctcgtaat tggcctggta ggtgcgcgga tcgatccggt
     3721 agaggacctt ccccttgggc acatccgtgc cctctacgta gggccgctcg acgatcaccc
     3781 cggatacctg ggcgcgaacc tgaacgctct tcgaggcagc agcctgggct acccactcgt
     3841 actgccccgg gatggtctgc cgctggac
//
LOCUS       DASYRV010000612         4195 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_805400, whole genome shotgun sequence.
ACCESSION   DASYRV010000612 DASYRV010000000
VERSION     DASYRV010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4195
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_805400"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..404)
                     /locus_tag="VGQ24_16105"
     CDS             complement(<1..404)
                     /locus_tag="VGQ24_16105"
                     /inference="COORDINATES: protein motif:HMM:NF025092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEV8456417.1"
                     /translation="MTLRMCGMSLLLSLLCVQVSAAQVRQITGRVTNSSTEQGVGGAT
                     IAVSGTGIVAETNTEGNYVLKAPDGDQTLVVRAIGYKRQQVPVASAQTTADVALEPDV
                     FKLEELVITGQATGVERQNLPNAVATVSGEEL"
     gene            complement(623..1864)
                     /gene="hutI"
                     /locus_tag="VGQ24_16110"
     CDS             complement(623..1864)
                     /gene="hutI"
                     /locus_tag="VGQ24_16110"
                     /EC_number="3.5.2.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050480 - imidazolonepropionase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazolonepropionase"
                     /protein_id="HEV8456418.1"
                     /translation="MKMLANIARLATCRAEGGQGDIHVVPDAALVWNKAEIVWVGPER
                     ELPAQYQRAERVDAGGRLVIPGLIDCHTHLAFAGWRADEFAQRIRGRSYLDIARAGGG
                     IASTVRQTRAASEEELVERASGFLAEMLALGVTTAECKSGYGLNEETELKLLRVYRRL
                     GREQPVRLVPTFLGAHVVPPEFRNNREGYVELLAERLIPRIAGDKLASFCDVFVEESA
                     FSVAEARRILRAGQRAGLGSKLHADQLTNETGAELAGEIGAVSADHLECISERGIAAL
                     REAGVVAVSLPLAALYLRQQPMPARRLIDSGVALAVATDFNPGTAPSYHLPLALTLAC
                     TLQRLTPAEALKGATVNAARAVGLEAEIGSLEPGKAADLAVIDAPDVDHWLYHFRPNA
                     CVMTIAGGVPRWTAHAAHQSA"
     gene            complement(2004..3671)
                     /gene="hutU"
                     /locus_tag="VGQ24_16115"
     CDS             complement(2004..3671)
                     /gene="hutU"
                     /locus_tag="VGQ24_16115"
                     /EC_number="4.2.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016153 - urocanate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HEV8456419.1"
                     /translation="MASATQVHTIRAPTGPTISCKGWHQEAALRMLMNNLDPAVAERP
                     EELIVYGGGGKAARNWDCYERIVTTLRRLKNDETLLVQSGKPVGVFQTHDEAPRVLIA
                     NANLVPRWATWDEFRRLDALGLTMYGQMTAGSWIYIGTQGILQGTYETFAECARQHFG
                     GTLEGRLVVTGGLGGMGGAQPLAATMNGAAFLGVDVDEERIHRRVDTRYCDRLETDLD
                     AALRLVQEARERREALSVGLVGNIADVLPELVRRGVVPDVLTDQTSAHDLRVGYIPSG
                     MTLGQAAHERERHPEDYERRVLDSMTVHVRAMLDLKARGAVAFDYGNNLRGQVADRRG
                     MREAFDIPGFVPEFIRPLFCRGAGPFRWAALSGDPADIAVTDRAVLETFPKKSALARW
                     IQQAQERVAFQGLPARICWLEYGERAELGARFNWLVKKRRVGAPIVIGRDHLDTGSVA
                     SPNRETENMKDGSDAIADWPLLNALLNTACGASWVSIHHGGGVGIGYSIHAGMVAVAD
                     GTDSAERRLQRVLTADPGTGVMRHADAGYDIAIQTAKARGIDLPMID"
     gene            3855..>4195
                     /locus_tag="VGQ24_16120"
     CDS             3855..>4195
                     /locus_tag="VGQ24_16120"
                     /inference="COORDINATES: protein motif:HMM:NF016430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor"
                     /protein_id="HEV8456420.1"
                     /translation="MNELGLEAAILEHEQTGRTDPDAVDATLAASGDASAFERLYRNH
                     VSRVYGLVRRMLSDDDADEVAQDIFVRAWQKLGTFRGEAAFGTWLHRLAVNVILARRE
                     TLGTRRKRYLEG"
BASE COUNT          729 a         1412 c         1343 g          711 t
ORIGIN      
        1 ttgagctcct cgcccgacac cgttgccacc gcgttcggca gattctgccg ctcgacgccg
       61 gtggcctggc cggtgatgac tagctcctcg agcttgaaga catcaggctc gagcgccaca
      121 tccgccgtgg tctgcgccga ggccacgggc acctgctggc gcttgtagcc gattgcccga
      181 accaccagag tctgatcgcc gtccggcgct ttaaggacgt aattcccctc ggtgttggtc
      241 tcggccacaa ttccggtgcc actcacggca atggtggcac cacccactcc ctgctcggtc
      301 gaggagttgg tcacccgccc agtgatctga cggacctgtg ccgctgatac ctggacgcaa
      361 aggagggaga gcaacaggga catgccgcac atgcgcagtg tcatggcgcc tccaacgttc
      421 ttgcttgagg gtgctgcagg aatttgccac tacagtgcat cgcgaccgca ggacgcgcaa
      481 ggaggggctc actcagcgtc gttcggcaca tcctcgtaac aaccaccaga ccgtgaacac
      541 ggctagtcgg gctgtctgac cgttctatcg acggagggat tgagctcgac gaccactgac
      601 cggggtggca gcccgcggga gatcaggcgg attgatgcgc agcatgggcg gtccaacggg
      661 gaactccgcc ggcaatcgtc atgacacagg cattgggacg gaagtggtac agccagtgat
      721 cgacatcggg ggcgtcgatc accgcgagat cggccgcctt ccccggctcg agcgagccga
      781 tctccgcctc gagtcctaca gccctggccg cgtttaccgt ggcgcccttg agcgcctccg
      841 ccggcgtcag tcgctggagc gtgcaggcga gcgtcaatgc cagtggaaga tgatagctcg
      901 gcgccgtacc ggggttgaaa tcggtcgcga cggccagggc tacaccgctg tcgatcagcc
      961 gccgggccgg catcggctgt tgccggagat agagtgcggc caacggaagg ctcacggcaa
     1021 ctacccccgc ctcccggagc gcggcgatcc cccgctcgga gatgcactcc agatggtcgg
     1081 cggagaccgc cccgatctcg ccggctagct ccgcaccggt ctcattggtg agctgatcgg
     1141 cgtggagctt tgatccgaga ccagcgcgct gaccggcccg gaggatacgt ctcgcctctg
     1201 ccacgctgaa ggccgactcc tccacgaaga catcgcagaa gcttgcgagc ttgtcgccgg
     1261 cgatcctggg gatcaggcgt tccgccagca gctcgacgta cccctcacga ttgttccgaa
     1321 actccggcgg caccacgtga gcgccgagga aggtgggcac cagccgaacg ggctgctccc
     1381 ggcccagccg ccggtacacc cgcaacagct tgagctcggt ctcctcattg aggccatagc
     1441 cgctcttgca ctcggccgtg gtgaccccga gcgcgagcat ctccgccaga aatccgctgg
     1501 cgcgctcgac cagctcctcc tcactggctg cccgagtctg ccgcaccgtc gaggcgattc
     1561 cgccgcccgc tcgcgcaatg tcgaggtagc ttcggccccg gatacgctgg gcgaattcgt
     1621 cggctctcca gcccgcaaag gcgagatgcg tgtggcagtc gatgaggcca gggatcacca
     1681 gccgcccgcc tgcatcaacc cgctcggccc gttggtactg agccggcaac tcgcgctctg
     1741 gcccgaccca gacgatctct gccttattcc ataccagtgc ggcgtcgggg accacatgga
     1801 tgtccccctg cccaccctcg gcgcgacagg tcgcgagccg ggcgatattg gcgagcattt
     1861 tcatggagag gagctccgca gacactttac cacgaaggca cgaagaacac gaaggacacg
     1921 aagaaaaaca acaaacagtg ttctcttggt gaccttgctt ttgcctttgt ggccttcgtg
     1981 ttaaaagaaa gcaccggagc tcatcaatcg atcataggta ggtcgatgcc gcgcgctttg
     2041 gcagtctgaa ttgcgatatc gtatcccgcg tccgcgtggc gcatgacgcc ggtgccggga
     2101 tcggcggtga gcacgcgctg aagccgccgc tccgccgagt cggtgccgtc ggcaacggcc
     2161 accatcccgg catggataga gtagccgatc ccgacgccgc cgccatgatg gatcgagacc
     2221 cagctcgcgc cgcaagcggt gttgagcaac gcgttgagca gcggccagtc ggcgatcgca
     2281 tcggagccgt ccttcatgtt ctcggtctcg cggttgggcg atgccacgga tccggtatcg
     2341 aggtggtcgc gcccgatcac gatcggcgct ccgaccctgc gcttcttcac cagccaattg
     2401 aaccgcgcac ccagctcggc gcgctcaccg tactccagcc agcagatgcg ggcggggagg
     2461 ccctggaagg ccacccgttc ctgggcctgc tggatccagc gggcgagcgc gctcttcttc
     2521 gggaaggtct ccagcaccgc ccggtcggtc acggcgatgt ccgccggatc gcccgagagg
     2581 gctgcccaac gaaatgggcc ggccccccgg cagaaaagcg gtcggatgaa ctcgggaacg
     2641 aaaccgggaa tgtcgaacgc ctcgcgcatg ccgcgacggt ccgccacctg gccccgcagg
     2701 ttattgccgt agtcgaacgc caccgcgccc ctggctttga gatcgagcat ggcgcggacg
     2761 tgcacggtca tcgagtcgag cacccggcgt tcgtagtctt ccgggtgccg ctctcgctcg
     2821 tgggcagcct ggccgagcgt catgcctgag gggatgtagc cgacccgaag gtcgtgagcc
     2881 gaggtctggt cggtcaggac gtctggaacg acgccgcggc gcaccagctc gggcaataca
     2941 tcggcgatgt ttccgaccaa cccgaccgag agggcctccc gccgctcccg ggcctcctgt
     3001 accaggcgca gagccgcatc gagatcggtc tcgaggcggt cgcagtatct cgtgtccacc
     3061 cgtcgatgga tgcgctcttc atccacatcg acgccgagaa acgccgcgcc gttcatggtc
     3121 gcggcgagcg gctgggcgcc ccccatgccg ccgagccctc cggtgaccac gagcctgccc
     3181 tcgagggtgc cgccaaagtg ctgccgggcg cactcggcga acgtctcata ggtcccctgg
     3241 aggattccct gagtgccgat gtagatccag gagcccgccg tcatctgccc gtacatcgtg
     3301 agcccgagcg cgtcgagccg gcggaactcg tcccaggtgg cccatcgagg caccaggttc
     3361 gcattggcga tgagcacccg gggagcctcg tcgtgagtct gaaagacccc gacaggcttg
     3421 ccgctctgga ccaggagcgt ctcatcgttc ttcagccggc ggagcgtggt gacgattcgt
     3481 tcataacagt cccagttccg cgccgccttg ccgccgcccc cgtagacgat cagctcctcg
     3541 ggccgctccg cgacggccgg atcgaggttg ttcatcagca tcctgagcgc ggcttcctgg
     3601 tgccagccct tgcaggagat agtagggccg gtgggtgccc ggatggtatg cacttgagtc
     3661 gctgaggcca cgctggctgc tcgatcatgt catcctgagg gagcgcagcg accgaaggat
     3721 ctctcaaggc gtggagggat ccttcgcttc gcccaggatg acaaccgttg gctggacgcg
     3781 ctgctgagcc caagcctagc cttctcccta agagcctgca accttttggg ccatcggacg
     3841 atccaactcc cgcgatgaac gaactcggcc tcgaggcggc gatactggag cacgaacaga
     3901 ccggcagaac cgatcctgat gctgtggacg cgacgctggc tgccagcggc gatgccagcg
     3961 cattcgagcg gctctatcgg aaccacgtga gccgggtcta cggactggtt cggcggatgc
     4021 tcagcgatga cgacgccgac gaggtggccc aggacatctt cgtccgggcc tggcagaagc
     4081 tgggaacgtt tcgcggtgag gccgccttcg gcacctggtt gcaccgcctg gccgtcaatg
     4141 tgattctggc ccgccgcgaa acactgggca cccggcgcaa gcggtacctc gaagg
//
LOCUS       DASYRV010000613         4375 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3516819, whole genome shotgun sequence.
ACCESSION   DASYRV010000613 DASYRV010000000
VERSION     DASYRV010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4375
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3516819"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(29..391)
                     /locus_tag="VGQ24_16125"
     CDS             complement(29..391)
                     /locus_tag="VGQ24_16125"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEV8456421.1"
                     /translation="MQQAFDSLNHRNFLFGKGGMGAIDFDDCGYGHWLYDLAVPLTML
                     RDHPAYAGLRQGLLTGYRRRRPLPVDQEAHLETFMALRSVQDVLGMIKEKDHPAFRDG
                     WEAAAASGIDHLRGFTAR"
     gene            690..1094
                     /locus_tag="VGQ24_16130"
     CDS             690..1094
                     /locus_tag="VGQ24_16130"
                     /inference="COORDINATES: protein motif:HMM:NF018663.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEV8456422.1"
                     /translation="MQIQTYLFFDGRCEEALEFYRSALGAEVTTLMRFKESPDQSMVS
                     PGCEDKVMHSSFRIAETTLLASDGRCQGQPSFEGFALTLTAPNEAEAERLFTSLSDGG
                     QVQMPLTETFFARRFGMAADRFGVSWMILVAR"
     gene            complement(1427..1633)
                     /locus_tag="VGQ24_16135"
     CDS             complement(1427..1633)
                     /locus_tag="VGQ24_16135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456423.1"
                     /translation="MIHYLATEERSRPPFEWLATDYAACSPEERREVEAEVREELERR
                     GMTDDQRRTLDELWARLHATHQSN"
     gene            complement(1646..2233)
                     /locus_tag="VGQ24_16140"
     CDS             complement(1646..2233)
                     /locus_tag="VGQ24_16140"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEV8456424.1"
                     /translation="MKITVMKAIDLLLLETEQAYRELTDTLQGISEGHAWAVPPQDGP
                     GYLHTSGSILEIVQHIATCKVMYGSAAFRDTAVRWRDCAARLDAIGADWQQNLAYLRE
                     SHDGWVACWSALGDDELLRLRSTNWGEQWPTWRIISTISQHDTYHAGQIALLHASLPA
                     VSVPPPSHADAIRRHLQDQSSVLYDPSAQPPPAAG"
     gene            complement(2342..3280)
                     /locus_tag="VGQ24_16145"
     CDS             complement(2342..3280)
                     /locus_tag="VGQ24_16145"
                     /inference="COORDINATES: protein motif:HMM:NF019228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
                     /protein_id="HEV8456425.1"
                     /translation="MARLLEDATAGDPSTGLLWTHRSLRKLAKALRRRGIRLAPNTIA
                     RLLDEAGFSLRTNRKRLAEGNDPDRDRQFRYLGRLRKLYLNRGWPVISVDTKKKEWIG
                     LFKNPGRTWRRSAQAVLAHDFPSSAVGQAIPYGIYDIARNDGFVVVGTSHETPSFACA
                     SIRRWWLLVGRARYPQAQRLLIEADCGGANDYRKWEWKVGLQQLADEFDLSITVTHYP
                     PGASKWNPIDHRMFSLISANWAGEPLVSYETVLQHIRETRSATGFHCRAVLDRHAYPT
                     GWRATPADPSRVRLQPCRLMPDWNYTIRPHARHRFC"
     gene            complement(3286..3618)
                     /locus_tag="VGQ24_16150"
     CDS             complement(3286..3618)
                     /locus_tag="VGQ24_16150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456426.1"
                     /translation="MNKENSGAGLRLCPCRSCQRDPNGLTAEQHRSINRLVAVADERA
                     RRLLVGFLAEQHGRGGISLLSRITGLDRNTIARGQRELHGDETLPPGRIRHRGGGRKP
                     AEVALPGS"
     gene            3767..>4375
                     /locus_tag="VGQ24_16155"
     CDS             3767..>4375
                     /locus_tag="VGQ24_16155"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEV8456427.1"
                     /translation="MDPTMLSRRELLAALVSSGLAASVGAETLSMKDTDMDQNQSPEP
                     PAEYEVIVVGGSFAGLSAAMQLARARRRVLIIDTGKPRNRFAKTSHGFFGQDGRAPKE
                     ILETARRQLLAYPTVKFLRAEAIHAVGEKDRFLVRFGDNGEARARRLVLATGVTDHLP
                     EVPGMKELWGTGVAHCPYCHGYEVSGRKLAVFSVGKASVHQAL"
BASE COUNT          785 a         1418 c         1371 g          801 t
ORIGIN      
        1 agcgggcatg agcctctcct tgttcaggtt accgggcggt gaagccccgc agatgatcga
       61 tcccggaggc tgcggcggcc tcccacccgt cgcggaaggc aggatggtct ttctccttga
      121 tcatccccag gacgtcctgg accgatcgca aggccatgaa ggtctccagg tgtgcttctt
      181 gatccaccgg aagcgggcga cgccggcggt agccagtgag gagcccctgg cgcagcccgg
      241 cataagcggg atggtcccgg agcatcgtca gtgggacggc cagatcatag agccagtggc
      301 cgtaaccgca atcatcgaag tcgatggcgc ccataccgcc cttgccgaac aagaagttgc
      361 ggtggttgag ggaatcaaaa gcttgctgca cagctctata tcgtgagcac cgcggctacc
      421 gctaaaacca atcgctgtca ttcggaccgc gtgtagcaac cgagtagccg agggatcgtc
      481 atcttcgtag gcctccctca cgccgccagg gcggggcccg attcttcgac ctgctgtcga
      541 ggcggccgcc acaccgggca ctcgtctcga ccgtgaacct gcccgagccg atcgagattc
      601 tccttttccg ataacgcaat cttaagtttg aggacggcct gggtgcggta ttatgtagca
      661 tgaaccccaa cccatgagaa ggagatgcaa tgcaaatcca aacctacctg ttcttcgacg
      721 gccgctgtga ggaggcgctc gagttctacc gcagcgcgct cggcgcggag gtgaccacgc
      781 tgatgcggtt caaggagagc ccagaccaga gcatggtctc gcccggttgc gaggacaagg
      841 tgatgcattc aagcttccgc atcgctgaga ccacgctgct ggcttccgac ggtcgatgcc
      901 aggggcagcc gagcttcgag ggcttcgcgc tgacgctcac agcgccaaat gaggccgagg
      961 ccgagcggct gttcacctcc ctgtctgacg gtgggcaggt gcagatgccg ttgaccgaga
     1021 cgttctttgc ccggcgcttc ggcatggcgg ctgaccgttt cggcgtttca tggatgatcc
     1081 tcgtggcacg ttgaggcgtg ggatcggagg tagccctgtc gaggtcatcg ggacagggct
     1141 acctccagcc gtggccgaac tggaagcgga actggccctc ttgcgtcctc tcgtcgccca
     1201 acttcaggag ccactggaca agctccccgc gcgcctctgc cgcaactccc aaaactcgtc
     1261 gcgtcctccc tcctccgatc ccccctcggc tcccccgcgt ctcccctcct ctcctcctgc
     1321 ccaccgcaaa ccggggggcc agccgggcca cgacggcacc cggaatacag ggttccaaga
     1381 gccctaactg tgcccggtct cacggtaagg ttcgacacgg ctgcgatcag ttactctgat
     1441 gagtggcgtg gaggcgcgcc cacagctcgt cgagcgtccg ccgctggtcg tcggtcattc
     1501 cccgacgctc cagctcttcc cggacctcgg cctctacctc gcgccgctct tcggggctac
     1561 aggccgcgta gtcggtcgca agccactcaa aggggggccg ggatctctcc tcggtggcta
     1621 agtaatggat caaaactctt tgcggtcacc ccgcagccgg tggtggctgc gcggatggat
     1681 cgtataggac gctgctctga tcctgcaggt gtctgcggat cgcatcagcg tgcgagggtg
     1741 gaggaacaga gacagcaggc aagctcgcat gaagcagggc gatctgcccg gcgtggtagg
     1801 tgtcgtgttg ggagatcgtg ctaataatgc gccaggtcgg ccactgctcg ccccagttgg
     1861 tggagcgcag gcggagaagc tcgtcatcgc ccaaggcgga ccagcaagcg acccaaccgt
     1921 cgtggctctc ccggaggtag gcgaggttct gctgccagtc ggcgccgatg gcgtcgagtc
     1981 gagcggcaca gtcgcgccac cgcactgcgg tatcgcggaa ggcggcactg ccatacatca
     2041 ccttgcaggt ggcgatgtgc tgcacgatct ccaggatgga cccagacgtg tgcaggtagc
     2101 caggaccgtc ctgcggaggg acagcccagg catgtccttc gctgatgccc tggagagtat
     2161 ctgtcagttc cctgtaggct tgctcggtct ccaataggag tagatcgatg gctttcatga
     2221 cagtgatttt caccggcgca gggacctctc ctgccaacat tcgcagccct gcacttggcc
     2281 acgggcacgg ggcgctgcaa gaacttatgg cgccttactt aggcactgtg caaaaacaac
     2341 ttcagcaaaa gcgatgacga gcatgcggcc taatggtata gttccaatcg ggcatgagcc
     2401 ggcacggctg gagtctcact cgcgacgggt ccgcgggcgt cgctcgccat ccggtgggat
     2461 acgcgtgccg atccaagacc gcccggcaat ggaagcccgt ggccgatcgc gtctcgcgga
     2521 tgtgctggag taccgtctcg tagctcacca atggctcgcc ggcccagttg gcgctgatca
     2581 ggctgaacat ccggtggtcg atcgggttcc acttgctcgc tcccggtggg tagtgggtga
     2641 ccgtgatcga aaggtcgaac tcgtccgcca actgctgcaa gcccaccttc cactcccact
     2701 tgcggtagtc attcgccccg ccgcagtccg cctcgatcag caatcgctgg gcctgcggat
     2761 aacgtgcccg tccgaccagc agccaccagc ggcggatact cgcacaagcg aacgacggcg
     2821 tctcatgcga ggtccccacc accacgaagc cgtcgtttct ggcgatgtca tagatcccgt
     2881 aggggatcgc ctggcccacc gccgagctgg ggaaatcgtg ggcgagcacc gcttgagcgc
     2941 tccgccgcca ggttcgaccg ggattcttga acaggccgat ccactccttc ttcttcgtat
     3001 ccacgctgat caccggccag ccacggttca gatagagctt ccggagccga cccaggtagc
     3061 ggaactgccg gtctcggtcg gggtcgttcc cctccgccag ccgtttgcgg ttcgtccgca
     3121 gcgagaagcc cgcctcatcc agcagccggg cgatggtgtt gggagccaag cggatgcctc
     3181 gccgacgcag ggccttagcc agtttgcgca gcgaacggtg cgtccacaac aacccggtgc
     3241 tggggtcgcc ggccgtggca tcctccaaca ggcgggccaa ggccctcacg accccgggag
     3301 ggcgacctcc gcgggtttgc gtccgccccc ccgatgccgg atgcggcccg ggggaagcgt
     3361 ttcgtcgccg tgcaactccc gctggccccg cgcgatcgta ttgcgatcca gacccgtgat
     3421 gcgggacaag agggagatcc caccacggcc gtgttgctcc gccagaaagc cgacgagcag
     3481 gcgccgcgca cgctcgtccg ccacggcgac caagcggttg atactgcggt gctgctctgc
     3541 cgttaggccg ttgggatccc gctggcaact gcggcacggg cagaggcgca gccccgcccc
     3601 actgttctcc ttgttcatac ccgtttctcc tcttgggccc aggtcaagag gccaaacgga
     3661 ttctacccaa ttctgctgaa gttattcttg cacagtgcct tagccataaa ctgtacttgt
     3721 ctgtcgacca attccctcgt aatatagcat ggaaggagat aacctgatgg acccaacgat
     3781 gctctcccgg cgtgaactcc tcgccgctct cgtcagtagc ggcctggccg cttcggtggg
     3841 agcggagacc ttaagcatga aggacaccga catggatcag aaccaatccc ccgagccgcc
     3901 ggccgagtac gaggtgatcg tcgtcggcgg cagctttgcg ggactctccg ctgcgatgca
     3961 gttggcccgc gcccgcaggc gggtgctcat cattgacacc ggtaagcccc ggaatcggtt
     4021 cgcaaagacg tcgcacggtt tcttcgggca ggacgggcgc gcaccaaagg agatcctcga
     4081 aaccgcgcgc cggcaactcc tcgcctaccc gactgtcaag ttcctgcgcg ccgaagccat
     4141 ccacgctgtg ggagagaagg atcgtttcct cgtccgcttt ggagacaacg gtgaggcacg
     4201 agccaggcgt ctggtgctgg cgacgggcgt gacggaccat ctgccggagg tgccggggat
     4261 gaaagagctg tggggaacgg gcgtagcaca ctgtccctat tgccacggct acgaggtttc
     4321 cggacgcaaa ctggcggtct tcagcgtcgg aaaggcgtcg gttcaccagg cgctg
//
LOCUS       DASYRV010000614         2916 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3302067, whole genome shotgun sequence.
ACCESSION   DASYRV010000614 DASYRV010000000
VERSION     DASYRV010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2916
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3302067"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..441
                     /locus_tag="VGQ24_16160"
     CDS             <1..441
                     /locus_tag="VGQ24_16160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456428.1"
                     /translation="VYPAGTIISPVPVVAPGEDFPHLSPTPVGGVGATPLFLRIYDDE
                     ENFRRNVDIFCRCWGAHPVTGIDPIYSNSDPVSGAPRGTYTEVEGEPVCGNSEPCSFT
                     GYRSIRWGLGVVGNDIFGRLSNGNLESLRGFTFIGPNPEVTPER"
     gene            1135..1425
                     /locus_tag="VGQ24_16165"
     CDS             1135..1425
                     /locus_tag="VGQ24_16165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456429.1"
                     /translation="MDKLPIDATHPGPSVARDPMSHPPDAAEFLDIQVHRLPRLRPFN
                     TAGPSRAKPSWPNEPRSPGLRRPLGDLAPVQHHRRRNRSISTRSPLEIARGE"
     gene            complement(1741..>2916)
                     /locus_tag="VGQ24_16170"
     CDS             complement(1741..>2916)
                     /locus_tag="VGQ24_16170"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HEV8456430.1"
                     /translation="QDAWQTVIEIRPPERGVSARDGELALGPAGEVALIYRWWRHEPR
                     AKQIRLARSDDGGKTWIQASTPVDTSGKTFDPRVAWSKGKSLVVVWADERRGDRHFDI
                     YARRSPDGGMTWEAEQLLSRFPRNGPSDLHARPQLLSDGGDRLWAVWVGVRNSKSFLF
                     MNRSLDGGRTWTEPVPLSGESRSVFGQTLLGAGDRMLLTWQDSVGGQDRIYAVSSSDS
                     GVTWTTPVRVDHLPAGAPPATGATALLGQDGEALVAWQDARNGRDDIFLARSTDGGRT
                     WSKDDQRMDMDEPGTAFSRAPKLAKSPDGRVALTWEDDRAGFEAVYARIRSAGQKAEW
                     GPELPIAPPTGKIAARIPNLAWGPGGLYIVWQAWDHTLAPARTDKTIVGRTVSPDKP"
BASE COUNT          470 a         1004 c          936 g          506 t
ORIGIN      
        1 gtctatcctg ctggcaccat aatctctccc gtcccggtgg tggctccagg agaggacttc
       61 ccgcatctgt ccccgactcc tgtcggtggt gtgggggcga cgcctctctt cctgcgcatc
      121 tacgacgatg aggagaactt ccgccgtaac gtcgacatct tctgccgctg ctggggtgct
      181 caccccgtca cgggcatcga cccgatctac agcaactcgg atcctgtcag cggtgcgccg
      241 cgtggcacgt acaccgaggt tgagggcgag cccgtttgcg gtaactccga gccctgctcg
      301 ttcaccggct atcggtcgat ccggtggggc ctgggcgtcg tcggtaacga catcttcggc
      361 cgcctgagca acggcaacct cgagagcctc cgtgggttca cgttcatcgg tccgaacccg
      421 gaggttactc ccgagcggta acaagaagta agacgcagta gtctcattgg gcggcggggg
      481 atcagtcccg ccgcccaatg agtttttcgc cgcttctctt gcaagccacc gagaatgctt
      541 ctgccacgcc gtgtcgtcta gggactcgcg agcgcggaga gccccagagc tgacctcgcc
      601 gctcgtgcgc ctactcggag cgcactgctg agcggcgtgc gatgccacgc ggcaccgcgg
      661 atgatcgcgg cgggccgagc cggtgagcat ggcctgcttg gtgacgccga agtgggcttc
      721 gatctcattg agccaggagg cgtcggtcgg gtatcccgcg ggctggactt gtaggtgccc
      781 gagcagcgcc aagaagtacg ggtgacccga ggatccgctt gcggcggcgg aacagtccac
      841 tcagacagtc ggcatggggc gtcgtaggaa gccggaggga ttcctcggtg cccttcgagc
      901 gatgatacgt ggcccgcagg ctgcggcccg ccctgacgag ccgaggcacc gctcctaggt
      961 gtgaagtctc aacagatcgg cttcggcgac gactctagtg atgggtggct gaccatggag
     1021 agggctgtgc cgccgatgcc gcgacccgtg cccctgcgga tcgggtaagg tgagagcccg
     1081 ctcatcggac agcacttcgg cgcaggccac ccgcgagcaa tcatcgatgc agacgtggac
     1141 aaactcccca tcgatgccac gcatccggga ccgtcggtcg cccgtgatcc gatgtcccat
     1201 ccgcccgatg cggccgagtt tcttgatatc caggtgcacc ggttaccccg gctgcgccca
     1261 ttcaatactg ccggccccag ccgcgccaag ccgagctggc ccaacgagcc acggtcgccc
     1321 ggcttgcgcc gacctctcgg cgatctggct cccgtccagc accatcggcg ccgcaaccgc
     1381 tcgatttcca ccaggagccc gctcgagatc gcgcggggtg aatgatgcgg ccggcacgag
     1441 cgatcctcca aagccaactc cccttcgctg cccgcgcggt ccacttgcgg accgtgcgat
     1501 cacagagccc gaaactgcgg gcgaccgggg cgcctccatc gcgtcgatgg tcgtttggca
     1561 accaccaccg tcacagagac gttccgggtg ggacaatctc ctgagacttc gcacctaggg
     1621 gcgagggctc caggggccct cagcgccggg caaacccaac gcgaccccgg aagtgagcgg
     1681 gcctgtcgac caacagcaga gcgccgcggg tctgagatcc ttcgggcgac tactggaagc
     1741 ttacggcttg tccggactca cggtgcgacc cacgatggtc ttgtcggtgc gcgcgggcgc
     1801 cagtgtgtga tcccaggcct gccagacgat gtacagccct cccggtcccc aggcgaggtt
     1861 gggaatgcga gcagcgatct tgccggttgg cggcgcgata ggaagctcgg ggccccattc
     1921 cgccttctgg cccgccgacc gaatccgagc gtaaaccgct tcgaagcccg ctcgatcgtc
     1981 ctcccaggtg agagccacgc gaccatcagg gctcttcgct agctttgggg cgcgggaaaa
     2041 cgccgtgccg ggctcgtcca tgtccatccg ctgatcgtcc ttcgaccagg tgcgtccccc
     2101 gtctgtcgat cgggccagga agatgtcatc cctgccgtta cgcgcatctt gccaggcgac
     2161 cagggcttct ccatcctggc cgagcagcgc cgtcgctcca gtggccggcg gagcgccagc
     2221 cgggaggtga tcgacgcgta ccggcgtggt ccatgtcacc cccgaatcgc tcgagctgac
     2281 cgcgtagatg cggtcctggc cacccaccga gtcctgccag gtgaggagca tgcgatcacc
     2341 agcccccagc agcgtctggc cgaatacgga gcggctctcc ccgctcagcg gcaccggctc
     2401 ggtccaggtg cgcccgccgt ccagcgagcg gttcatgaag aggaagctct tcgagttgcg
     2461 cacgccgacc cacaccgccc agagtcgatc accgccgtcg ctcagcagct gaggccgcgc
     2521 gtggagatcg ctggggccgt ttctggggaa ccggctcagc agttgttccg cctcccacgt
     2581 catgcctcca tccggggagc ggcgggcgta gatgtcgaag tgccgatctc cgcgccgctc
     2641 gtccgcccat acgaccacga gcgatttccc ctttgaccat gcgactcgtg gatcaaaggt
     2701 cttgcccgag gtgtccactg gagtcgacgc ttggatccat gtcttgccgc catcatcgga
     2761 gcgcgcgagg cggatctgct ttgcgcgcgg ctcgtggcgc caccaccggt agatcagtgc
     2821 cacttcgccg gcggggccaa gcgccagctc tccatcgcgc gcgctgacgc cgcgctctgg
     2881 ggggcgaatc tcgatcactg tttgccacgc atcctg
//
LOCUS       DASYRV010000615        15453 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2685886, whole genome shotgun sequence.
ACCESSION   DASYRV010000615 DASYRV010000000
VERSION     DASYRV010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 15453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15453
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2685886"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(128..487)
                     /locus_tag="VGQ24_16175"
     CDS             complement(128..487)
                     /locus_tag="VGQ24_16175"
                     /inference="COORDINATES: protein motif:HMM:NF015639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HEV8456431.1"
                     /translation="MGDFPSLPCFPCPHRSSCCAYGVTLSDEEAAAIALAHGDATIYR
                     TRWGEWRTRIRGGRCVFLRENICTIHAEAHYPAVCRGFPWTDAETGGPYEYDRTICPE
                     FVLRPELVQMGTVRGER"
     gene            complement(498..3158)
                     /locus_tag="VGQ24_16180"
     CDS             complement(498..3158)
                     /locus_tag="VGQ24_16180"
                     /inference="COORDINATES: protein motif:HMM:NF013256.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004559 - alpha-mannosidase activity
                     [Evidence IEA];
                     GO_process: GO:0006013 - mannose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 38 C-terminal
                     domain-containing protein"
                     /protein_id="HEV8456432.1"
                     /translation="MPGYTFHLIPHTHWDREWYLPQSVFLARLVPALDDLVRRLESEA
                     DTTFLLDGQTVLLEDYLRVRPDQEPRVAELVRAGRLQVGPWYVLADELIPAGESLIRN
                     LLLGQADADRFGGRSDVLYSPDAFGHPAVWPQLAGEFGMRFGVVWRGIGGEPGQERDL
                     YRWRGPDGREVLLYHLPPDGYEIGAALPADPDRLTEIWSRVRAMLVPRASTRQVAVFV
                     GADHHAAHPDIGAVRSLLGRLEPENEFRISRLCDFFTAASSEAAGLPVVSGELRWSYG
                     YAWTLQGVHGTRAPLKRRHGLTELALGRIAEPLAALALAARGSDRRATLHHAWRMLVR
                     SQFHDSIAGTTSDAVARRVRLRLDDARGVAGEIARTSLDDLLGNNPDRARTDPGATAP
                     QLVLWNPVPRRRKGVVVTDLTWFRRDVLVGPPGDRVPRVGQGYRPFQLAGFDGAIAVQ
                     PLGGGQAQERLDAPHHYPDQDEVDRVRVAFAAPEVGGLGLMNLQPVDGAAPVSHAGTW
                     IRGRSLGNELIEVSVEAGGALRLIDRRTRQSYRDLLVLESGGDAGDSYTYCRPARDRI
                     RRSRGPVTVRPLAQGPLVVALEAQWRMPAGRRGRGAGTVGVRLLVSLYAGSPIVRCTL
                     EIDNQAAHHRLRARLPTGLPSGSAVVGAQFGSIEPMPVRDDRRKYPRETPVTTAPAHR
                     YLAAAVRSRGLAVLAPGFFEYELEHRGDLVITLLRAIGALSRNDLPTRPGHAGWPVAT
                     PEAQCLGAERLQLAIAPVTRADLDDSTTLPELWEDAFLPVQGIWLRQATRLAVEPIDV
                     TLEGDGLVFSGLKPAERGEGMVLRCYNATGRPTAGAWHFGAPVTSAHRARADERQLHE
                     IRLGDGGRFVPFHAAAHELVTIMVALGRSD"
     gene            complement(3206..3502)
                     /locus_tag="VGQ24_16185"
     CDS             complement(3206..3502)
                     /locus_tag="VGQ24_16185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456433.1"
                     /translation="MAFTREQIRESVERAGDAHWQALIRHHEDAYPASRPTPGEVARQ
                     EADRLNSMGLGDNPNLRLVESRVEQVPPAVRITHVFEDRTKGTRFETEPFTGYD"
     gene            complement(3465..3680)
                     /locus_tag="VGQ24_16190"
     CDS             complement(3465..3680)
                     /locus_tag="VGQ24_16190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456434.1"
                     /translation="MGSGERLRRWAGWVCLGVVAVFVALGYYFRNIRFTPLAGGFLIL
                     SAVFLIERGEDQLERHGIHPGADTGVG"
     gene            complement(3790..3966)
                     /locus_tag="VGQ24_16195"
     CDS             complement(3790..3966)
                     /locus_tag="VGQ24_16195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456435.1"
                     /translation="MVEYAFLVAHNSANFMGGVGSDVLSWASRLNWTMLGYAAAGLVL
                     LWLALGVIKPTRRY"
     gene            complement(4027..5178)
                     /gene="menC"
                     /locus_tag="VGQ24_16200"
     CDS             complement(4027..5178)
                     /gene="menC"
                     /locus_tag="VGQ24_16200"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: protein motif:HMM:TIGR01928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HEV8456436.1"
                     /translation="MPIDRIELYELMLPLLEPFIISGGTMVERRSLVVVLHDNEGHRG
                     YGESPPFELPFYSEETLASVRYLLEQVLIPRLLQSEAESPEAVDEMVHRGVRGNPFAR
                     AALETAAWDLEAARRGVGLARLLADRLCVEPALTVPCGVALGIPPDRSLDTLRRWIEE
                     ALTRGYQRVKIKIAPGWDASPVHAASEAMAGSGLPLTVDGNGAYEWPEHEANLRAVDA
                     AELLYIEQPLAPDELVGHARLTRELRTPVCVDESLRDARAARQIAELDGPRVWNVKVH
                     RVGGLSEVARIYAVARSYGAKLWAGTMPESGIGSQAALAAAALPGFVHPSDLEPSTRW
                     FGRDGDVIQLTMSGDGRMEVPSVGIERQLDPERFQASSQLIRSWATSRR"
     gene            complement(5261..6448)
                     /locus_tag="VGQ24_16205"
     CDS             complement(5261..6448)
                     /locus_tag="VGQ24_16205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456437.1"
                     /translation="MRAQLERDFERFKRELPRDFPAHVRDAYRIDLGARYLGYRLPHP
                     IGKGSGQLSLSLEQLEADRAAGLAFVVLKTVIAEDPEGGRSMGAWAIHETRMKVERRV
                     SEAGREGWTVTWKGRGWDRLFEDYLTLVRTAADVTRAGDLVAVPSVKYHLPRLDEPFR
                     ALEYEHTTGLLALAWGGRVLPLEKDFSPTLAGDPLADEQARILRWLREVPDQIRRPVS
                     EGGVRLALKLMNARFDDAFQLEMLAAAASADALVVFNRLWDPVSGVAFGGYDLSERNL
                     RVLRQARSEGRVLPPLTGSGNVCSGRMILEYARLGCESVQLHTFFQLPLSEYPATGGS
                     RSQRALHALVFDPIDGLIAAMLDLEAQGKLERRGGELRFLDIPSSPEAFSRKHQNAKA
                     RTL"
     gene            complement(6426..7307)
                     /locus_tag="VGQ24_16210"
     CDS             complement(6426..7307)
                     /locus_tag="VGQ24_16210"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEV8456438.1"
                     /translation="MPTLTDRIAGGLIPAVPVPFRGRDLDAAAQRQYAGWMAAQPVAG
                     VAVWAHTGRGPYLEADVRRQVLETWREAMGDRIVVAGARDIGMAIEARREKADALLAF
                     PQSNDPIGYHRRLGRELPVIAFYLYQAAGGVDYDDQTLHGILELPEVLGIKVATLDSV
                     MTFQRIAAVLRQHPTKLLITGEDRFLGYSLLLGARAALIGMGAALPDLQADLVRACIA
                     EDWPRFVSLSELCDRFSQTTFIQPMEGYIRRMLWAAAAEGALPPDSCDDPWGPPLPPG
                     ERDAVERAVRDARATRA"
     gene            complement(7295..8068)
                     /locus_tag="VGQ24_16215"
     CDS             complement(7295..8068)
                     /locus_tag="VGQ24_16215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456439.1"
                     /translation="MRIDVNSFLGAYPFRKVPGTAPDGLLRSMDRTGIDQAWVAHLPS
                     VFWRDPAAGNAWLYETAGRQARFRPVPAVHPGLAGWQRSVAEALSAEAPAIRCDPMYY
                     GLEPVGAEMQALVKLCGKEQVPLMLAVRLEDSRQRHPNDRAGELPPWAVRTLVRGDSR
                     VRLLVTHADRPFIEEVHFGSTPEESARIWWDISWVWGPPEDHLETLLGTIGVERFVFG
                     TGQPLRLPETSVAKLDLLDLSKEQRAAIESQNVTDICPL"
     gene            complement(8068..8868)
                     /locus_tag="VGQ24_16220"
     CDS             complement(8068..8868)
                     /locus_tag="VGQ24_16220"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEV8456440.1"
                     /translation="MLIDVHAHFLHDRSPRSDWLARNTSRLRAGERVGITVHVASILG
                     SWGASSPIYFPSPPDIEYGNDFLLQLQRTHPARVRGYAVVNPNFGSHALVELARCLDA
                     GMIGIKLAASRRANDPLLDPICRVAGERGVPVLHHVWQHRRREYPGQEASDASELAAL
                     AGRHPGVNFLLAHIGGGGDWIHSLAVVRDLPNVFVDLSGSGVDGGMLEACVDAVGVER
                     LLWGCDLTIDTGWAKLLYLEHLLTGDELELVKWRNASRIFPPTAFPTD"
     gene            complement(8875..9045)
                     /locus_tag="VGQ24_16225"
     CDS             complement(8875..9045)
                     /locus_tag="VGQ24_16225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456441.1"
                     /translation="MSPRKRTIDDLDDIDDEDGVLEEEKAQETDLDLTIADPEDVAAA
                     LPPEFDQEEEER"
     gene            complement(9094..10260)
                     /locus_tag="VGQ24_16230"
     CDS             complement(9094..10260)
                     /locus_tag="VGQ24_16230"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEV8456442.1"
                     /translation="MTDHIAGFTSTGSKRPEALFGELSADLPSRMVRSSGCHVWDDHG
                     REYTDYIMGLGSVALGYGHLDVTRAATAAVEAGVVGPLAPLVEEEVAAELCRLMPWME
                     RVRFLKTGAEAMAAAVRLARVATARESILGCGYHGWLDWCQGREGVPHSTRALYDELP
                     FNDANAARELIRSMGDRLAAVVFEPIVVTEPDPEWLKTLREETANVGALLIVDEIKTV
                     GRLAIGGACERYGIRPDLAVIGKAIANGFPLAAVGGRADVMAGVSRTWISSTLATEFV
                     SLAAARATLAVLTSQRVPEHLRRVGGRLLDGLFALRRRHPDLVIGVGGVAEMCFLQYA
                     DEAASRAVTAACAHAGLLFKRSAYNFVSLAHTEQVIDRSLEVLAEALSVAAKPA"
     gene            complement(10257..13013)
                     /locus_tag="VGQ24_16235"
     CDS             complement(10257..13013)
                     /locus_tag="VGQ24_16235"
                     /inference="COORDINATES: protein motif:HMM:NF019552.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heparinase II/III family protein"
                     /protein_id="HEV8456443.1"
                     /translation="MLNAEELDARRAAIASEPDLRALRDRLVQRAGPVLARMPLVPGS
                     KALLSADGGVCPEDGTRLVFDPWSPTAHRCSHCGREFGGERHDRAWAHYQHLWLAERA
                     AHLATVAVTAERDDAATRANQLLQAYRGYQQYPNRDNVLGPSRLFFSTYLESIWIGNY
                     LAAAVLMREAGLLSDESGEIVSSVADEAANLIGEYDEGFSNRQTWHNAALASIAVWFE
                     DGDLAARAIEGQTGILAHLLHGFGEDGMWYEGDNYHLFALRGQLLALGWARLAGVDLL
                     DDPRLAARIAAALRAPALTALPDFTFPARKDSRFGVSLAQPMYLELWEIGLARLGRGA
                     EEHEALWSWLRRLYQSPAPPAQTFDSYLHEAGEPVPTRPRSRADLSWWSLLEMVPTMP
                     AETPAWSPGSAFIEGQGLALLRSGDRYASLECGPYGGGHGHPDRLNLVLHAGGEYWLP
                     DFGTGSYVARDLFWYRSTLAHNAPRLDGVSQPMGDAFCENFEENGAWAWARGRYGDLT
                     RTLVAGPDYLLDVVQLSAAEDHMLELPLHLSGRVEVKPAGNWEPAELPDEFARQVERY
                     RPASSDGIVLHACGPSGATLSAHLVYQGDLLRALGPGAPGSTEPMPFYLVRSQGRTLS
                     IISLLQSGTGRPVIRGVREVDNTIEVETESGVDHHIATVEGWEIRSPAGVSRLKGTRR
                     QPKPFEPLVRDRPLVAHGVALAIAEPPSLDGSMEGFQAAEPLQLDHEDQYRRSEEPYA
                     GPDEFSATAVVNWSDEALYLAVEVVKPEVVARDPAAPPLRLDNEPDEIHADGVQVYVR
                     LSPDELAHGYLVVPSSKDRGLIARGVSGTALREGEVRGGWEPTESGYRITVAIAPAQW
                     GPFRPGDEIGFDLLVNQMLPGRIRRAGQLVWSGGGGWVWLRGDRQDPARLGTIELAPM
                     RAGR"
     gene            complement(13007..14020)
                     /locus_tag="VGQ24_16240"
     CDS             complement(13007..14020)
                     /locus_tag="VGQ24_16240"
                     /inference="COORDINATES: protein motif:HMM:NF020133.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456444.1"
                     /translation="MKPPGSSGETFAAVAPVRLDLAGGWTDVPPFSEREGGVVVTAAV
                     RLFARAEVRLGGRGFRLVSEDLHDQLEVSDSAGLGRDGRLDLLKAGLRMLPVGACTLT
                     TRSEAPPGSGLGSSGALDVALVAALSSARGESPDPVAIAETACHLEAVEAGIAGGRQD
                     QFASAHGGFLRLDFRDPDAEVQRLKLDPAFVADLARRMLLCYTSASHFSGTTIARVMR
                     AYEQGDRGVVAALHGLRDVAESMVTALAAADFAGVGRLLSENWNHQQALDPNMRTEEM
                     ARLERALLAAGALGGKAAGSGAGGCMFFLAPDDPAGMIEAATACGVRLLPVRWAMRGV
                     YQC"
     gene            complement(14017..>15453)
                     /locus_tag="VGQ24_16245"
     CDS             complement(14017..>15453)
                     /locus_tag="VGQ24_16245"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEV8456445.1"
                     /translation="IEYAVLPARIAILFLAATTSACGSTADRRGATVLFASGADLQSI
                     NPLLTVHPLARQVQRYVLLTTLARYDSTLTARPYLARRWEWSPERTRLTFHLETTVRW
                     HDGQPTTARDVAWTLEAARDPDTGYPRANELAELASARVSDDSTVVLRFRSPQSGFPD
                     LLTDLAILPAHLLHSIPHAGLRQAAWNVAPVGNGPFRFVSHEPNRRWVFAADSAFPAA
                     LGGPPRLQRFTVVVVDEPTTKLAALVSGELDFAGIQPAHAEFVRRDPNLEVVSYPLLM
                     TYGIVFNTRRPPFNRLALRRALSHAIDREELVEGYIYGFGTPAEGPVPPSAPKYLPIA
                     TAGSSPPEPRTQRVAFELLTVGSGEAALEQMVQARLRSAGFDLTIRQLELSAFLARVY
                     RSHDFDAAVLGIPGDLGLGYLVPLAALAGIKAPADPAAAQRLFADSLPVAFLYHARGL
                     QGMNRRVHGVTMDLRGELPTVHDWWVGS"
BASE COUNT         2737 a         5191 c         5184 g         2341 t
ORIGIN      
        1 acatcccggg aggttttggt gcttggctca aagagggtct gccggttgaa aggtcagagg
       61 tgagcagtga ggggtgagag gtgaccgccc tctcacctct cacctcttac ctctcacctc
      121 tcacctctta cctctcacct cttaccgttc ccatctgcac cagctccggc cttagcacga
      181 actcgggaca gatcgtccgg tcgtactcgt aagggccgcc ggtctcggca tcggtccagg
      241 gaaatccgcg gcatacggcg ggatagtgcg cttccgcgtg gatagtacag atgttctccc
      301 gaaggaagac acagcggccg ccccggatcc gggtgcgcca ctcgccccag cgggtgcgat
      361 agatggtggc gtcgccgtgt gccagcgcga ttgcggcggc ctcctcgtca ctcagagtga
      421 cgccgtacgc acagcaggac gagcgatggg gacagggaaa gcacggtagc gatggaaaat
      481 cgcccatggg caacaagcta gtcggatcgg ccgagcgcca ccatgatggt gacgagctca
      541 tgagccgccg catgaaaggg cacgaagcgg ccaccgtcac cgagccggat ctcatgcagc
      601 tgacgctcgt cggcgcgcgc ccgatgcgcg ctggtgaccg gcgcgccgaa gtgccaggct
      661 cccgcggttg gacggccggt ggcgttgtag caacggagaa ccatgccttc gccccgctcg
      721 gccggcttga gaccggagaa caccaggccg tctccctcga gcgtcacatc gatcggctcg
      781 accgcgagcc gggtggcctg gcgtagccag atgccctgta ccgggaggaa ggcatcctcc
      841 cacaactccg gcagtgtagt gctatcgtcg agatctgccc gggttactgg tgcaatggcg
      901 agctggagcc gctccgcgcc gaggcactgc gcctcgggcg tggcgaccgg ccagccggcg
      961 tggccgggtc tcgttggcag gtcgttgcgc gagagcgctc cgatggcccg aagcagggtg
     1021 atcacaagat cgccgcggtg ttccagctcg tactcaaaga atccgggggc gagcacggcg
     1081 aggccccggc tcctgaccgc agcggccagg taccggtgcg ccggagccgt ggtcacgggc
     1141 gtctcgcgcg ggtacttccg acggtcgtct cgcaccggca tgggctcgat ggatccaaac
     1201 tgcgcgccga cgacggcgct tccgctggga agcccggtcg ggagacgtgc ccgcaaccgg
     1261 tggtgtgcgg cctggttatc gatctcgaga gtgcaacgga cgatcggtga tccggcatag
     1321 agcgacacga gcagccgaac tcccaccgtg ccggcgccgc gcccgcgccg gcccgcaggc
     1381 atccgccatt gggcttccag cgcgaccacg agcgggccct gcgcgagggg gcggacggtt
     1441 accggccccc ggctccggcg aatccggtcc cgcgccggcc gacaataagt gtatgagtca
     1501 cccgcatcgc ccccggactc gagcaccagc agatcgcggt agctctgccg ggtccggcgg
     1561 tcgatcagcc gcaatgcacc gcctgcttcc accgagacct cgatcagctc gttgcccagg
     1621 ctgcggcccc ggatccatgt cccggcatgg gagactggag cagctccatc caccggctgg
     1681 agattcatga gtcccagccc gccgacctcc ggcgcggcaa aggcgacgcg cacccggtcc
     1741 acctcgtcct gatcgggata gtggtgggga gcatccagcc tttcctgcgc ttggccacca
     1801 ccgagcggct gcaccgcgat cgccccatcg aagccggcca gctgaaatgg ccggtaacct
     1861 tgacccaccc gaggcacgcg atcgcccgga gggccgacca gcacatcgcg gcggaaccag
     1921 gtcagatcgg tcaccaccac acccttccga cgccgaggga ccgggttcca gagcaccagc
     1981 tgcggggctg ttgctcctgg atcagtccgg gcccgatccg ggttgttgcc aagcaggtcg
     2041 tcgaggctgg tgcgcgcgat ctcgccggcg accccgcggg cgtcatccag gcggagccgc
     2101 acccgccttg ccaccgcatc gctcgtggtt ccggcgatcg aatcgtgaaa ctgactgcgg
     2161 acgagcatgc gccaggcatg gtggagcgtg gcgcgccggt ccgatcctct ggcggcgaga
     2221 gccagtgcgg cgagcggctc agcgatgcga cccagcgcga gctcggtcaa cccatgccgt
     2281 cgcttgagcg gagcgcgagt cccgtgcacc ccctgaagag tccaggcata accgtaggac
     2341 cagcgcagct ctcccgagac gaccggcagt ccggcggctt cggatgatgc ggcggtgaag
     2401 aaatcgcaca ggcgggagat acggaactca ttctcgggct cgagccggcc caggagggag
     2461 cggacggcgc cgatgtccgg gtgggctgcg tgatggtcgg ccccaacgaa tacggctacc
     2521 tgccgggtgg atgcgcgggg caccagcatg gcacgcacac gcgaccagat ctcggtaagc
     2581 cggtcggggt cggcgggcag cgccgcaccg atctcgtagc catcgggcgg aagatggtag
     2641 agcaagacct cgcgtccgtc cggtccgcgc cagcggtaga ggtcgcgctc ctgtccgggc
     2701 tctcccccga tcccacgcca gaccaccccg aagcgcatgc cgaattctcc cgcaagctga
     2761 ggccagaccg ctggatggcc aaaggcgtcg ggcgagtaga gcacgtcgct ccggccaccg
     2821 aaccggtcgg catcggcctg gcccagcagc aggttccgaa tcagtgactc gccagccggg
     2881 atcaactcgt cggccaggac gtaccagggg ccgacttgaa ggcggcccgc gcggaccagc
     2941 tcggcaaccc ggggctcctg gtccgggcgg actcgcaagt agtcctccag cagtaccgtc
     3001 tggccgtcga gcaggaaggt ggtatcggcc tcggactcga ggcggcgaac caggtcatcc
     3061 agcgcaggaa cgagtcgcgc cagaaagacg ctttgcggga gataccattc ccggtcccaa
     3121 tgggtatgag ggatcagatg gaaggtgtac cctggcatcg cgggaaacct agcccctgcc
     3181 agggaggggg gcgaggaacc cgggctcagt cgtacccggt aaagggctcg gtctcgaacc
     3241 gtgtgccctt ggtccgatcc tcgaacacgt gggtgattcg gactgcgggg gggacctgtt
     3301 cgacccggct ttcgaccagg cggaggttcg ggttgtcacc caggcccatg gagttgagcc
     3361 ggtcggcctc ttgccgggca acttcaccag gggtggggcg actggcagga taggcgtctt
     3421 cgtggtgccg gatcagcgcc tgccagtgcg cgtcacccgc gcgctcaacc gactcccgta
     3481 tctgctcccg ggtgaatgcc atggcgctcc agttgatctt caccacgctc gatcaagaag
     3541 accgcggaca gaatcaggaa tccgccggcc agaggcgtga aacgaatgtt gcggaagtag
     3601 taccccaagg cgacgaacac ggctaccact cccagacaaa cccagcccgc ccagcggcgc
     3661 agcctttcgc cggaacccat gactcgtctc cacgaaggtg acgctataat gatgctaagt
     3721 gcgcgttgag cgggctgtac ctccggtcac aggcggtgag tgagccgaag gcgggagggg
     3781 ttaaggagtt cagtagcggc gagttggctt gatgaccccc aatgccagcc agaggaggac
     3841 aagaccggcg gcggcatacc cgagcatggt ccagttcagc cgcgacgccc aggagaggac
     3901 gtcgctacct accccgccca tgaagttcgc ggagttgtgt gccaccagga acgcgtattc
     3961 caccatgttc aggttccccg acccgccgtt cggatagacc gagtttaggt gtcggtaccg
     4021 ggaccgtcaa cgccggctgg tagcccatga gcgaatcagt tggctggagg cctgaaaccg
     4081 ctccgggtcg agttggcgct cgatgccgac cgaaggcacc tccatacgac catccccact
     4141 catggtcagt tggatgacgt ctccgtctcg cccaaaccat cgggtactcg gctcgagatc
     4201 ggatggatga acgaaacccg gcagcgcggc cgcggcgagt gccgcctgag agccgatgcc
     4261 ggattcaggc atggtccccg cccagagttt ggcaccgtag ctccgggcga cggcatagat
     4321 gcgggccact tcgctcaacc caccgacgcg gtgcaccttc acattccaca cccgcgggcc
     4381 atcgagctcc gcgatctgcc gagcggcgcg cgcgtcccgg agcgattcgt ccacgcagac
     4441 cggcgtccgc aactcacggg tgagccgcgc atggcccacc agctcgtcgg gggcgagggg
     4501 ctgctcgatg tacagcagct ccgctgcatc gaccgcacgg aggttggcct cgtgctcggg
     4561 ccactcatag gcgccattcc cgtccacggt gagcgggaga ccggagccgg ccatcgcctc
     4621 gcttgccgcg tgcaccgggg acgcatccca gcccggggcg atcttgatct tgacccgctg
     4681 atatccgcgg gtgagcgctt cctcgatcca ccggcggagc gtgtcgagtg agcggtcagg
     4741 gggaattccc agggcgacgc cgcatggcac cgtgagggcc ggctcgacgc agagccgatc
     4801 ggcgagcaac cgggcaaggc cgaccccgcg gcgcgccgcc tcgagatccc aggcagccgt
     4861 ctcgagcgct gcccgggcga agggattgcc ccggacgccc cggtgcacca tctcgtcgac
     4921 ggcttccggg gactccgcct cgctctggag caggcggggg atgagtacct gctcgagcag
     4981 gtaccgcaca ctcgccaggg tctcttccga gtagaatggc agctcgaacg gtggcgactc
     5041 gccgtagcca cggtgaccct cgttgtcgtg caggacgacg acgagcgacc ggcgctccac
     5101 catcgtgccg cccgagatga taaacggctc cagcaagggc agcatcagct cgtaaagctc
     5161 tatccgatca atgggcatta ttgagcagtt aagagttcat atcacgaaaa cacgaaaaca
     5221 cgaaaacacg aagaaagatg tttagtgcat ttggatgcgc tcaaagagtt cgtgctttcg
     5281 cgttttggtg ctttcgtgag aaagcttctg gtgagctcgg gatatcaaga aatctcaatt
     5341 ccccgccccg ccgttcgagc tttccctgag cttccaaatc aagcatggca gcaatgagcc
     5401 cgtcgatagg gtcaaaaacc agcgcgtgca acgcgcgctg ggaacgagat cccccggtgg
     5461 ctgggtattc cgacaggggc agctgaaaga aggtgtggag ctggacgctc tcgcagccga
     5521 gccgggcata ctcgaggatc atgcgcccgc tgcacacgtt gccgctgccg gtcagcggcg
     5581 gcaggacgcg gccctcgctg cgggcctgac ggagcacccg aagattacgc tcgctgaggt
     5641 catagcctcc aaaggcgacg ccgctcaccg gatcccacag ccgattaaag acgaccagcg
     5701 catcggccga ggcggcggcg gcaagcatct cgagctgaaa ggcgtcgtcg aagcgggcat
     5761 tcatcagctt gagcgccagc cgcactccac cttcgctcac cgggcggcga atctgatccg
     5821 gcacctcgcg caaccagcgc aggatgcggg cttgctcgtc ggcgagcggg tccccggcaa
     5881 gcgtgggaga gaagtctttc tccagcggga gcacacgccc gccccatgcc agagccaaca
     5941 ggccggtggt atgttcgtat tccagggcgc ggaacggctc atcgagccgt ggcaggtggt
     6001 acttgaccga tggcaccgcc acgagatctc ccgcacgggt gacgtcggcc gccgtccgca
     6061 ccagggtgag atagtcctcg aataagcggt cccatccccg ccccttccag gtgaccgtcc
     6121 atccctcccg tccggcttcg gacacgcgac gctcgacctt catccgggtc tcgtggatgg
     6181 cccaggcgcc catggaccgt ccaccctcgg gatcctccgc gatgaccgtc ttgagcacca
     6241 cgaaggcaag gccggcggcg cgatcggcct ccagctgttc caggctcagc gagagctgcc
     6301 ccgagccctt gccgatggga tgcggcagcc gatacccgag atagcgggcg ccgagatcga
     6361 tccggtacgc gtcccgcacg tgcgccggga aatcgcgggg cagctcgcgc ttgaagcgct
     6421 cgaagtcacg ctcgagttgc gcgcgcatcc cgcaccgcac gctcgaccgc gtcgcgttcg
     6481 ccaggaggaa gcggagggcc ccaggggtcg tcgcacgagt ccggcgggag agccccctcg
     6541 gcggcggcgg cccagagcat tcgccggatg tacccctcca tcggctggat gaaggtggtc
     6601 tgggagaacc ggtcgcacag ctcggagagc gacacgaagc ggggccagtc ttccgcgatg
     6661 catgcccgca ccaggtcggc ctggagatcg gggagtgccg cgcccatgcc gatcaacgcc
     6721 gctcgggcgc cgagcagcag cgaatagcca aggaagcgat cctccccggt gatcagcagc
     6781 ttggtaggat gttgccgcag cacggcggcg atccgctgga aggtcatcac cgagtccagc
     6841 gttgccacct tgatgcccag gacctcgggc agctccagaa ttccgtgcag cgtctggtca
     6901 tcgtagtcca ccccgcccgc cgcctgatag aggtagaatg cgatgaccgg cagctcgcgg
     6961 cccagccgcc ggtgatagcc gatgggatcg tttgactggg gaaatgccag gagcgcatcg
     7021 gccttctcgc gccgggcctc gatggccatg ccgatgtcgc gggcgccggc caccacgatc
     7081 cgatcaccca tcgcctcgcg ccaggtctcg agcacttggc gacgaacgtc cgcctcgagg
     7141 taaggccccc gcccggtgtg ggcccagacc gcgacgcccg ccaccggctg tgccgccatc
     7201 caacccgcgt attgccgctg agcggcggca tcgagatcgc ggccgcggaa ggggacggga
     7261 acggccggga tgaggccgcc ggcaatgcga tctgtcagag tgggcatatg tctgtcacgt
     7321 tttggctctc gatagcggct cgctgttcct tcgacagatc gagcagatcg agcttggcca
     7381 cgctggtctc gggcagcctc agcggttgtc cggttccgaa gacgaaccgc tcgacgccga
     7441 tggtcccgag caacgtctcc agatgatcct cgggcggacc ccagacccag gagatgtccc
     7501 accagatccg ggccgattct tccggcgtgg acccgaaatg cacctcctca atgaacggcc
     7561 ggtcggcatg ggtgacgagg agacgcaccc gagaatcgcc ccggaccagg gttctgaccg
     7621 cccacggtgg gagctcgcct gcgcggtcgt tcgggtgccg ctgcctggaa tcttcgaggc
     7681 gcacagccag catcaggggc acctgctcct tgccgcagag cttcaccagc gcctgcatct
     7741 ccgcgccgac cggttcgaga ccatagtaca tcggatcgca ccgaatcgcg ggcgcttcgg
     7801 ccgacaaggc ttcggcaacg ctccgctgcc agccggcgag gccgggatgc accgccggca
     7861 ccggccggaa acgcgcctgc cgcccagctg tctcgtagag ccacgcgttg ccggcagccg
     7921 ggtcgcgcca gaaaacgctc ggcagatgag cgacccacgc ctgatcgatg ccggtacggt
     7981 ccatggagcg gagcagcccg tcgggagcgg taccgggcac cttccgaaac ggataggcgc
     8041 cgagaaagct gttgacatcg atccgcatca gtcggtcgga aaggcggtcg gggggaagat
     8101 gcgggacgcg tttctccact tgaccagctc gagctcgtcg cccgtgagca ggtgctccag
     8161 gtagagaagc ttggcccagc cggtatcgat ggtgagatcg cagccccaca gcagccgctc
     8221 gacacccact gcatcgacgc acgcctccag catgccgccg tccaccccgc tccccgaaag
     8281 atcgacgaag acgttcggga gatcgcgcac cacggcaagt gagtggatcc agtcaccgcc
     8341 gccaccgatg tgggccagga ggaagttgac cccgggatgg cgtcccgcca gcgcggcgag
     8401 ctcggatgcg tcggaggctt cctgtccagg gtactcccgg cggcggtgct gccagacatg
     8461 gtgcagcacc ggcacacctc gttcaccggc aacgcggcag atcggatcga gcagcggatc
     8521 gttggcccgg cggctggccg cgagcttgat cccgatcatc ccagcgtcga ggcagcgggc
     8581 gagctccacc agagcgtggc ttccgaagtt ggggttgacg acggcgtagc cgcgaacccg
     8641 cgccggatgg gtgcgctgga gctggagcag gaagtcgttg ccgtattcga tgtcgggcgg
     8701 tgacgggaag tagatcggag agctggcgcc ccagctcccc aggatcgacg ccacgtgcac
     8761 cgtgataccg acgcgctctc ccgcacggag ccggctggtg ttacgagcga gccagtcgga
     8821 gcgaggagag cggtcgtgaa gaaaatgggc gtgaacgtcg ataagcaccc ggctctacct
     8881 ctcctcctcc tcctggtcga actcgggggg cagagcggcc gctacatcct ccggatccgc
     8941 tatggtcagg tccagatcgg tctcctgcgc cttttcctct tccagcactc catcttcgtc
     9001 atctatgtcg tcgagatcat cgatggtccg tttacgcggt gacatgcatc cctcctgagc
     9061 aggtgcgacg actgtccggg ctgctctccc aatctaggca ggtttcgccg ccaccgagag
     9121 ggcctcagcc agcacttcca gcgaccgatc gatgacctgc tcggtgtggg ccagggagac
     9181 gaagttgtag gccgagcgct tgaagaggag gcccgcatgg gcgcaggccg cggtgacggc
     9241 gcgagaggcg gcctcgtcgg cgtactggag gaaacacatc tccgccacgc ctccaacgcc
     9301 gatgaccaga tccgggtgcc gccgccgcag ggcgaacaac ccatccagca aacggccacc
     9361 gacccggcgt aggtgctcgg gtacccgctg cgacgtcagg acagcgaggg tggctctggc
     9421 cgcggcgaga gagacgaatt ccgtggcgag cgtggaagag atccaggtgc gggacacccc
     9481 cgccatgacg tccgcgcgtc cgccgaccgc cgcaaggggg aagccgttcg cgatggcctt
     9541 tccgatgacg gcaagatccg gacggatacc gtagcgttcg cacgcgccac cgatcgcgag
     9601 gcggcccacc gtcttgatct cgtccacgat gagcagcgcg ccgacattgg cggtctcctc
     9661 ccgcaacgtc ttgagccact cggggtcggg ctcagtcacc acgatgggct cgaacacgac
     9721 tgccgccagc cggtcgccca tcgagcggat cagctctcgc gcggcattcg cgtcgttgaa
     9781 cggaagctcg tcatacaagg cacgggtgga gtggggaaca ccttccctgc cctggcacca
     9841 atcgagccag ccgtgatagc cgcaaccgag gatagactcc cgtgcggtgg caacccgggc
     9901 gaggcgcacc gctgcagcca ttgcctcggc gccggtcttg agaaaccgca cccgctccat
     9961 ccagggcatc agccggcaca gctcggccgc tacctcctcc tccaccaagg gggccagtgg
    10021 gccgactacc ccggcctcga cggcggcggt ggccgcacgc gtcacgtcga ggtggccgta
    10081 gccgagcgcg accgagccca gtcccatgat gtagtcggtg tactcgcgcc cgtggtcgtc
    10141 ccagacgtga cagcccgagg aacgcaccat gcgggagggc aggtcggcac tcagctcgcc
    10201 gaagagcgcc tcgggccgct tgctgccggt ggaggtgaag ccagcgatgt gatcagtcaa
    10261 cggccggctc tcatgggggc caattcgatg gttcccaatc tggccgggtc ctgccggtcg
    10321 ccgcggagcc agacccagcc gccgccgccg ctccagacca gctggcccgc gcgcctgatt
    10381 cggccgggca acatctggtt caccagcaga tcgaaaccga tctcgtcgcc cgggcgaaat
    10441 ggcccccact gtgccggtgc gatggccacg gtgattcggt aacccgactc ggtcggctcc
    10501 cagccgccgc ggacctcgcc ctcgcgtaac gctgtgccgg agacgcctcg cgcgatcagc
    10561 ccacggtctt tgctggacgg cacgacaaga tagccatgcg ccagctcatc gggagaaagc
    10621 cggacatata cctggacgcc gtcggcgtgg atctcgtccg gctcgttgtc gaggcgaagt
    10681 gggggcgcgg ccgggtcgcg tgcgacgact tccggcttca ccacctccac cgcgaggtag
    10741 agcgcctcgt cgctccaatt gacgaccgcg gtcgccgaga attcgtccgg gcctgcatac
    10801 ggctcctcgc tccgccgata ttggtcttca tgatcgagtt gaagcggctc ggccgcctgg
    10861 aacccctcca tgctgccatc cagggaagga ggctcggcta tcgcgagcgc cacgccgtga
    10921 gccaccagcg gtcggtcccg caccagtggc tcgaacggct tcggttgtcg ccgggtgcct
    10981 ttgagccggc tgactccagc cgggctccgg atctcccagc cttcgacggt cgcgatgtga
    11041 tgatccacgc cgctctcggt ttcgacttct atggtgttgt ccacttcccg gactccacgg
    11101 atcaccggcc gcccggtgcc ggactggagc aggctgatga tgctcagggt tcgcccctgg
    11161 ctgcggacta gatagaacgg cattggttcg gttgaccccg gagcgcccgg gcccagggct
    11221 cgcagaagat caccctggta gaccagatgc gcactcagcg tcgcgccgga gggaccacac
    11281 gcgtgcagga caatgccgtc ggaactcgcg ggacggtagc gctccacctg gcgtgcaaac
    11341 tcgtcgggga gctccgccgg ttcccagttc cccgccggct tcacctcgac ccgtccgctc
    11401 aaatgaaggg gaagctccag catgtgatct tcggccgcgg acagttggac cacgtccagc
    11461 aggtaatcgg gaccggccac cagtgtacgg gtcaggtctc cgtaacggcc gcgggcccag
    11521 gcccaggccc cattttcctc gaagttctcg cagaaggcgt cacccatcgg ctgggagaca
    11581 ccgtcgagtc ttggggcatt atgcgccagg gtcgaacgat accaaaagag atcccgggct
    11641 acatacgaac cggtaccgaa gtccggcagc cagtactcgc ctccggcgtg gagcacgagg
    11701 ttgagccggt cggggtggcc gtgtcctccg ccgtacggcc cacattcgag gctggcgtac
    11761 cggtcgcctg agcgcagcaa ggcaaggcct tgtccctcga tgaaagcgct gccgggcgac
    11821 caggcgggcg tctccgcggg catagtgggt accatctcga gtaaagacca ccaggagaga
    11881 tcggcacgag accgggggcg ggtcgggacg ggctcgcctg cctcgtgcag gtatgaatcg
    11941 aaggtctggg ccggcggagc cggtgattgg tacagtcggc ggagccagct ccacagagcc
    12001 tcgtgctctt cggccccgcg gccgagccgg gcgaggccaa tctcccagag ctcgaggtac
    12061 atcggctggg ccagggatac gccgaaccgc gagtccttgc gggccgggaa ggtgaagtcg
    12121 gggagcgcgg tgagcgcagg tgcgcgcagc gccgccgcta tgcgggcggc gagtcgcgga
    12181 tcgtccagga gatcgactcc cgccaggcgc gcccacccca gggccagcag ctggcctcga
    12241 agcgcaaaga ggtgatagtt gtcgccctca taccacatcc catcctcgcc gaagccgtgc
    12301 agcaggtggg cgagaatgcc ggtctgtcct tcgattgccc gggccgctaa atcgccgtcc
    12361 tcgaaccaga ccgcgatgct ggcgagcgcc gcattgtgcc aggtctgccg gttggagaat
    12421 ccctcgtcgt actcgccgat gaggttggcg gcttcatccg cgacgctgga gacgatctcg
    12481 ccgctctcgt ccgagagcag cccggcttca cgcatcagca ccgccgcggc caggtagttg
    12541 ccgatccaga tcgattccag ataggtcgag aagaagagcc ggctcggccc gagcacgttg
    12601 tcccgattgg gatactgctg atagccacgg taagcctgga gcagctggtt ggctcgggtg
    12661 gcagcatcgt ctcgctcggc cgtcaccgcc acggtggcca ggtgggccgc gcgctccgcg
    12721 agccagaggt gctggtagtg cgcccaggcc cggtcgtgac gctcgccgcc aaactcgcgg
    12781 ccgcagtggg aacagcggtg cgccgtgggg ctccaggggt cgaagaccag acgagtcccg
    12841 tcttcggggc agacccctcc gtccgcgctg agcagagcct tcgacccagg gaccagcggc
    12901 attctggcaa gcaccggccc ggcgcgttga acgaggcggt cgcgcaacgc acgcaagtcg
    12961 ggctcggacg ctattgcggc acgcctggcg tccagctctt cggcgttcaa cactggtaca
    13021 cgccccgcat tgcccagcga accggaagca agcggacgcc gcaggcggtt gcggcttcga
    13081 tcatgccggc cggatcgtcg ggcgcgagaa agaacatgca gccgccggcc ccggacccgg
    13141 cggccttccc gccaagcgca ccggcagcca gcagcgcgcg ctcgagccga gccatctcct
    13201 ccgtacgcat gttcgggtcg agtgcctgct ggtggttcca gttctcgctc aacaagcgcc
    13261 ctactccggc aaaatcggcg gcggccagcg cagtcaccat ggattcggcc acatctcgca
    13321 agccgtgaag cgccgcgacg acgccgcgat cgccctgctc gtaggcacgc atcactcgcg
    13381 cgatcgtcgt gccggagaaa tgggatgcgc tggtgtagca gagaagcatc ctccgcgcca
    13441 ggtcggcgac gaacgcgggg tcgagcttga gccgctgcac ctcggcgtcg gggtcgcgga
    13501 agtccagccg gaggaacccg ccatgggccg aggcaaattg gtcctgacgc ccgccggcga
    13561 tgccggcctc gacggcctcg agatggcagg cggtttcggc gattgccacc gggtcggggc
    13621 tctcgcctcg ggcggacgac agggccgcaa ccaacgccac gtccagcgcg ccggagctcc
    13681 cgagcccgga ccccggcggc gcctcggagc gagtggtgag ggtacaggca ccgacgggca
    13741 acatgcggag tccggccttg agaaggtcca gccgtccatc acgacccaag ccggccgagt
    13801 cgctcacctc gagctggtcg tgtaagtcct cggagacgag ccggaatccc cgcccgccga
    13861 gccgcacctc tgcccgggcg aacagcctga ctgccgccgt gacgacgacc ccaccctcac
    13921 gctccgagaa cggcggcacg tcggtccagc ctcccgccag gtcgagacgg accggcgcca
    13981 ccgccgcgaa cgtttcaccg gagctgccag gaggcttcac gatcccaccc accagtcgtg
    14041 caccgtgggc agctcgcccc tgagatccat cgtcacccca tgcactcgcc ggttcattcc
    14101 ctgaaggccg cgggcgtgat agaggaaggc gacaggcaac gagtcggcga acaggcgctg
    14161 cgcagccgcc gggtcggccg gcgccttgat gccggcgagt gccgccaggg gaacgagata
    14221 gccgagcccg agatcgccgg ggatgccgag aacagcggcg tcgaagtcat gggagcggta
    14281 gactcgcgca aggaaagcgg acagctccag ctgacgaatc gtgagatcga atccggcgct
    14341 cctcagacgc gcctgcacca tctgctccag cgcagcttct ccgctcccca cggtgagaag
    14401 ctcgaacgcg actcgctgcg tccgcggctc cggggggctc gatcctgccg tggcaatcgg
    14461 aagatacttc ggcgcggagg gaggtactgg gccctcagcg ggcgtgccga acccatagat
    14521 gtacccttcg accagctcct cgcgatcgat ggcatgactc agcgcgcgcc ggagggcgag
    14581 ccggttgaag ggcggccgcc tggtgttgaa cacgatgccg taggtcatga gcagcggata
    14641 gctcacgacc tccagattcg ggtcgcggcg aacgaactcc gcgtgcgccg gctgaatgcc
    14701 ggcgaagtcg agctcgcccg ataccaaagc ggcgagcttg gtggtcggct cgtccaccac
    14761 gaccaccgtg aaccgctgga gcctgggtgg gccaccaagc gccgccggga aggcggagtc
    14821 ggcggcaaag acccagcgac gattcggctc gtgggacacg aaccgaaatg gcccgttgcc
    14881 caccggtgcc acattccagg cagcctggcg gagccccgcg tgaggaatgc tatgcagcag
    14941 atgagccggc aggatcgcca gatcggtgag aaggtcggga aagccggact gaggcgagcg
    15001 aaatctcagg actaccgtgg agtcgtcgga gacccgcgcg gatgcgagct cggcaagctc
    15061 gttcgcccga gggtacccgg tgtccgggtc gcgtgcggcc tcgagggtcc aggccacatc
    15121 gcgcgcagtg gtcggctgtc catcgtgcca ccggaccgta gtctcgagat gaaaggtgag
    15181 ccgggtgcgc tcgggtgacc actcccagcg ccgggcgaga tacggtcgcg cagtcagcgt
    15241 gctgtcgtag cgtgcgagcg tggtgagcaa cacgtagcgc tgtacctggc gggcgagtgg
    15301 atgcacagtc agcaacgggt tgatgctctg gagatcggca ccagaggcga ataggacggt
    15361 ggcgccccgc cgatccgcag tcgatccgca ggcggacgtc gtggcagcga ggaacaggat
    15421 tgcgattcgc gccggaagca cggcgtattc tat
//
LOCUS       DASYRV010000616         2998 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1194765, whole genome shotgun sequence.
ACCESSION   DASYRV010000616 DASYRV010000000
VERSION     DASYRV010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2998
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1194765"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..199
                     /locus_tag="VGQ24_16250"
     CDS             <1..199
                     /locus_tag="VGQ24_16250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456446.1"
                     /translation="GSQVRIRFVQGIPDADHPVLGSPAAHFVGTFPNWTINFEDGADP
                     GGAGEPDFIDVVLGVHATVLQ"
     gene            480..552
                     /locus_tag="VGQ24_16255"
     tRNA            480..552
                     /locus_tag="VGQ24_16255"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:513..515,aa:Ala,seq:tgc)
     gene            1454..2731
                     /locus_tag="VGQ24_16260"
     CDS             1454..2731
                     /locus_tag="VGQ24_16260"
                     /inference="COORDINATES: protein motif:HMM:NF013586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016805 - dipeptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HEV8456447.1"
                     /translation="MGRTLRAGIRVRERLRDTPLGPLYRAEYPTGLEVAVVLLGSTSA
                     DSGALALLRQRCRDAIQTQHQNVPAIHELSETDDGLVYVVAESLTGELLSETLSRCGA
                     LPLGEALDLCLQTLLRRADAEPPIEQGVSLAGRRKLVPDLWPEQRVVAAVLVAVFAGL
                     WLLWGTQRPALDAPSRPRLEESGSAAPLEPDSISSSSASSAPARLPASSAPASPVRRE
                     SVSSRIPAASGPPPAASSNAASDSLLVDVRSVDSTIQVDLRYATSNNFTGAPLPGYEA
                     PRALLRRKVASALGRVQARLRTGGLGLRIFDAYRPVRATLAMVEWAERTGHRALLESG
                     YIAERSRHNLGVAVDLTLVDLVTGTEVPMGGPAFDSFTATADTANATGQALRYRQILV
                     QTMASEGFSPYEQAWWHFNYPLQGAVPLDRVIR"
BASE COUNT          473 a         1004 c          938 g          583 t
ORIGIN      
        1 gggctctcag gtgcggatac ggttcgtaca gggcatccct gatgcggatc accccgtcct
       61 gggctctcct gctgcgcact ttgtgggaac cttccccaac tggacgatca acttcgagga
      121 tggcgccgat ccagggggag caggcgagcc ggatttcatc gacgtcgttc tgggggtaca
      181 cgcgacagtg cttcagtaac tgcgagccgc accagcggct accacgcctg gctccgggac
      241 ctggcacatc ttcgccgagt gcatggccct tgagggcgca ggtcggcggt gaggcggccc
      301 tccttctctc catagctgag aacaggggcc gctttttgtt gcgcgtaggc gctggagccg
      361 acttgggcga gttgcgggag aaaggcgtgg gagcgcccca ttcttgcaca catctttgca
      421 cgcgccccac ttggggtgcg ccgcgtcagc ggctaacttg tatgctcgtc gtacccttcg
      481 gggcggtagc tcagctggga gagcacctgc tttgcaagca gggggtcgcc ggttcgatcc
      541 cggtccgctc cactcagaag tgtatttcga tccggtagtt acatctgctg tccttcggtc
      601 ttcggtattc ctccgtcgcg atcgtaacga aaaacgtcac gaacggccac tccgaggcgc
      661 tcagcggtaa ccagcgaagt cggaaatggc tacatcagct aagcaccgcc tttttcgact
      721 cggggccgac gcgctcagtc ggatatctcc ctgtcgagcc cccatgacta tcgacacact
      781 ggagtggccg accacgctcc acatgctctt cgattttcat ggtcggcccc ccgccggttg
      841 ggtatagagc aggccgagca cccggaacct ctgaacgctg ccgccattct taccttccat
      901 gacagcgtat gattcctttc gttcaagcag agagctatat cccctctggt tacactctcg
      961 aactgcaggt ccggcctgag ataaccaccc ctggccgtct ccggtactgt cgcgtatgat
     1021 ctttcgaatc cccgcgtcgg cattgcctac gggggtcctc caagacgggg ccggagggtc
     1081 gagcccgggc agtggtggag gctcgagtcc cggcaatggc gaggtttctt gccgcagtga
     1141 gaaagagcgg ccagttctga tctcggtgct gcatcttcgg gggtaagagc atggatacct
     1201 cgctccggtt gctaagtctc tggagctccg atcagcgtag atctgagaag cgcctgcatg
     1261 ccgggaatgg agttggatac agttgcggcc ggaccgcccc accgacgcgg tacttcgcga
     1321 gttccctcag tttcatcgtg atcagcttgg ccacaagact ccaccgggag aacagcagtt
     1381 gagcacgacc ccctgtgtcc agtgcggagc ccagcacgac ccgggcgcga gtccgtgccc
     1441 cgagcccagt ctggtgggcc gaaccctccg tgccgggatc cgcgtccgtg agcggctgcg
     1501 ggacaccccg ctcggacctc tctaccgtgc cgagtacccg accgggctcg aggtcgccgt
     1561 cgtgctcctg ggctccacat ccgccgactc tggtgcactc gctctactcc ggcaacgctg
     1621 ccgcgacgcg atccagaccc agcatcagaa tgtccctgcg atccatgagc tgagcgagac
     1681 tgacgatggg ttggtctacg tggtggccga gtccctcacg ggcgagttgc tgtcggagac
     1741 tctgtccagg tgcggcgctc tgccgctggg ggaggccttg gacctctgcc tgcaaaccct
     1801 cctgcgccgg gcggatgccg agccaccgat cgagcagggt gtgagtctcg ctggtaggcg
     1861 caaactcgtc ccggatctgt ggcccgaaca acgcgtcgtt gcggccgtcc tggtcgcggt
     1921 gttcgccgga ctctggctgc tctggggcac gcagaggccc gcgctcgacg caccgagccg
     1981 gccccgcctg gaggaatccg ggtccgcagc accactcgag cccgattcca tctcctcgtc
     2041 atctgcatca tcggccccgg cgcgtcttcc tgctagctcg gcgcctgcat cgccggtgcg
     2101 gcgcgagtcc gtgagttccc ggattcctgc cgcatccggt cctcccccgg ccgcctccag
     2161 caatgcggct tcagactcgc tgctggttga tgttcgctcg gtcgattcca cgatccaggt
     2221 cgatctgcgc tatgccacat ccaacaactt cacaggtgca ccgctccccg gttatgaggc
     2281 gccccgcgcc ctactccgcc ggaaggtggc tagcgcgctc ggccgggttc aagcccggct
     2341 tcgcaccggc ggcctcggcc tcaggatctt cgacgcgtac cgcccggtga gggccaccct
     2401 cgcgatggtc gagtgggccg agcgcacggg gcatcgggcg ctgctcgaga gcgggtatat
     2461 cgcagagcgg agccggcaca acctgggcgt cgccgtggat ctgacgctgg tggacctagt
     2521 gacgggaacc gaggtcccca tggggggccc cgccttcgac agcttcacgg ccaccgctga
     2581 cacggccaac gccaccggcc aggcgctgcg ctaccgacag atcctggtcc agaccatggc
     2641 atccgaaggg ttcagcccct atgagcaggc gtggtggcat ttcaactacc cgctccaagg
     2701 ggcggtgccc ctggatcggg tcattcggta gtcttcccgc actcaccgct cccgcacggc
     2761 cgcgtccccg tacgtgactc acactttgag cgttgcgcga tggcgatttc ctgccgagcc
     2821 gtgactgtca tgtttcgacc cgctctgact gtgtggccat gcctcatcgg cctgctgggg
     2881 gctgtcgcgt gcggccggtc cgccgatcgg attagtcatg agatccgcaa catcacctcg
     2941 gccgagaggc ccccggcata ccttgagggg gtccgctgga agttggtcag gcagatct
//
LOCUS       DASYRV010000617         4386 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_808755, whole genome shotgun sequence.
ACCESSION   DASYRV010000617 DASYRV010000000
VERSION     DASYRV010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4386
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_808755"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..201)
                     /gene="rpsB"
                     /locus_tag="VGQ24_16265"
     CDS             complement(<1..201)
                     /gene="rpsB"
                     /locus_tag="VGQ24_16265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEV8456448.1"
                     /translation="MAQPQLQDLLEAGVHFGHQTRRWNPKMRRFIFAERSGIYIIDLQ
                     KTLRQIGKAQELLRNVVLKGEGV"
     gene            complement(357..758)
                     /gene="rpsI"
                     /locus_tag="VGQ24_16270"
     CDS             complement(357..758)
                     /gene="rpsI"
                     /locus_tag="VGQ24_16270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEV8456449.1"
                     /translation="MTATPQFRWQAVGRRKTSVARVYLTPGTGKWDINGRTLGDYFPR
                     PSLVQHIQQSFTATDTLGAFDVKAHVNGGGQAGQAGALRHAIARALVEADGQHRLKLR
                     AAGLMTRDPRAVERKKPGRPGARKRFQFSKR"
     gene            complement(755..1207)
                     /gene="rplM"
                     /locus_tag="VGQ24_16275"
     CDS             complement(755..1207)
                     /gene="rplM"
                     /locus_tag="VGQ24_16275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEV8456450.1"
                     /translation="MKTFTATPADISHDWHLVDAEDVPLGRLASRVAQLIRGKHKPTY
                     TPHMDGGDFVVVINASKVKLTGRKLTNKVYFSHSGYMGHERFTAARDLLAKRPDRVIE
                     KAVFGMLPKTSLAKQKLRGKLKVYAGPDHPHAAQQPKPFSVTPSKASA"
     gene            complement(1285..1785)
                     /locus_tag="VGQ24_16280"
     CDS             complement(1285..1785)
                     /locus_tag="VGQ24_16280"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEV8456451.1"
                     /translation="MKYVVLLDGQTIEVEVDGDRVTIDGQVHSATLGVIPGTPLRQLL
                     IDGRPLTLAVEAIGRGRWALTPKGERWELEVLDERTRHIRSLAGGGGRRRAAGVLKAP
                     MPGLVVRVQVQPGAQVASGDPIVVLEAMKMENELKAGAPGTVKSVRVAPGEAVEKGQV
                     LVEFEP"
     gene            complement(1782..3002)
                     /locus_tag="VGQ24_16285"
     CDS             complement(1782..3002)
                     /locus_tag="VGQ24_16285"
                     /inference="COORDINATES: protein motif:HMM:NF017743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456452.1"
                     /translation="MTELRILRPAAGGDGVGRLPDGKTVFVPRTAPGDLVELGEIREH
                     KRFARARIRRVVESSPLRVDPRCPHYVVDECGGCQLQHLEYQAQLSARQSFVGDALRR
                     LGKRDVPDPPIVAAAKPYDYRTKLTLHVGAGGRRIGLHRYDRPDQVFDLVWCHITVPE
                     LMTMWQAVRKVRTLLPPALEQVVLRLDRSGGRHLLLRVGKSEVWSGAQRLFRAMERDG
                     VAATIWWQPEGGAARTVAGAGEAYPATVFEQVHPEMGDRVREFAVQQLGDVSGRKVWD
                     LYAGIGETTERLVRLGATVESVELDRRAVAEAEARGPAARRHTGRVEDVLRELRPPDL
                     VIVNPPRTGMDARVAAELARLLPRRVVYISCDPATLARDLQRLPLFDLKLVQAFDLFP
                     QTTHVETVAVLEPA"
     gene            complement(2999..>4386)
                     /locus_tag="VGQ24_16290"
     CDS             complement(2999..>4386)
                     /locus_tag="VGQ24_16290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HEV8456453.1"
                     /translation="GSPHVRAADLAIAIGPPSPSQSYLSIERLLAAALASGADAVHPG
                     YGFLAERAAFVEAVEAAGLVFVGPPAEAIRAMGDKTEARRRMEAAGVPIVPGAAPPAN
                     DSHAARTAADRLGYPVMVKAAAGGGGKGMRLVRGPEALDPGLDAARSEALKAFGDASV
                     YLEKFIEAPRHIEIQVLADHERTIHLGERECSIQRRHQKLVEEAPSVAVSAELRERMG
                     TAAVAAARVVGYRSAGTCEFLVTGDGSYYFLEMNTRIQVEHPVTELVYGVDLVREQLR
                     IAAGLPMRIHSSGLAPRGWAIECRITSEDPGNNFLPSTGRIEYLRPPAGPGIRWDSGV
                     ETGDEVTLYYDSMLAKLIVWAPDRSQALTRMRRALEELVVTGVATNQAFHRRLMADAE
                     FQRGEIDIQFLERRPDLLTSISSPEGIHDLAIAATLAEHELREGRRPAIAPDEASISQ
                     WTRQSRGEALR"
BASE COUNT          701 a         1528 c         1415 g          742 t
ORIGIN      
        1 gaccccctcg cccttgagca ccacgttccg caggagctcc tgggccttgc cgatctggcg
       61 aagggtcttc tggaggtcga tgatgtaaat gccggagcgc tcggcgaaga tgaagcgccg
      121 cattttcgga ttccaccggc gagtctggtg gccgaagtgc acaccggctt cgagcaggtc
      181 ctgcagttga ggctgtgcca tgctgtgact gacttcccgt ccgatttggg gttaggcgtc
      241 caccgcgttc atttccggct gcgatccttc cccctcgcgc tgctcggggt caggacaccc
      301 acagccggat cccgcgatgt gcgaggtcgg gtggaccggc ggtcggtcca tccgtcctac
      361 cgtttactga actgaaaccg cttccgcgcc cccggccggc cgggcttctt gcgttcgacg
      421 gcgcgaggat cgcgggtcat gagacctgcc gcgcggagct tgaggcgatg ctgaccatcg
      481 gcttcgacca gggcccgggc aatggcatgc cgcaaggcac ccgcctggcc cgcctgccca
      541 ccgccgttca cgtgcgcctt gacatcgaaa gcgcccagcg tgtccgtggc ggtgaaggat
      601 tgctggatat gctgcaccag tgacggtcgc gggaaatagt cacccagcgt ccggccgttg
      661 atgtcccact tgccggtgcc gggggtgagg tacacccggg cgacactggt tttgcgccgg
      721 ccgactgcct gccagcggaa ctgcggcgtc gctgtcatgc gcttgccttg gacggggtga
      781 cggaaaaggg cttgggctgc tgcgccgcat gcgggtggtc agggccggcg tacaccttga
      841 gcttgccccg aagcttctgc ttggcgagtg acgtcttcgg cagcatgccg aacacggcct
      901 tctcgatgac ccggtcggga cgcttggcga gcaggtcgcg cgccgcggtg aagcgctcgt
      961 gacccatgta gccgctgtgg ctgaagtaca ccttgttggt caacttcctg ccggtcagct
     1021 tgaccttgga agcgttgatg accaccacga aatcgccccc gtccatatgg ggcgtgtaag
     1081 tcggcttatg cttgccacga atgagctggg ccacccgact ggcgagccgt ccgagcggaa
     1141 catcttccgc atcgacaagg tgccagtcgt gactgatgtc cgccggtgtg gcggtgaatg
     1201 tcttcatcta ctccgctgcc ttgggcgttg gacctgggcc aaactgaaac agactcacaa
     1261 gatagcgagc cggctgggtt tgggtcaagg ctcgaactcc accagtacct ggcccttctc
     1321 caccgcctcg ccgggtgcaa cccgcaccga cttcaccgtg cccggcgccc ccgccttgag
     1381 ctcgttctcc atcttcatgg cctccagcac cacgatggga tcgccggacg ccacctgcgc
     1441 gccgggctga acctgaaccc gaacaaccag ccccggcatg ggcgccttca ggactccagc
     1501 ggctcggcgc cgaccgccgc caccggccag gctgcgaatg tgccgggtcc gctcatcgag
     1561 cacctccagc tcccatcgct cgcctttggg ggtgagcgcc cagcggccgc gaccgatggc
     1621 ctccaccgcg agcgtcaacg gcctgccgtc gatcaggagc tgacggagcg gtgttcccgg
     1681 tatgactccc agggtggcgc tgtggacttg cccgtcgatg gtgacgcggt caccatccac
     1741 ctcgacctcg atcgtttgcc catccaacag caccacgtat ttcatgccgg ctccagcacc
     1801 gcaacggtct ccacatgagt tgtctggggg aagaggtcga aggcctggac cagcttgaga
     1861 tcgaagagtg gaagccgctg gagatcacgg gccagcgtag cggggtcgca cgagatgtag
     1921 accacccggc gagggaggag ccgcgccagc tcggcggcca ctcgcgcgtc catgccggtc
     1981 cgtggcgggt tgacgatgac cagatcgggt ggccgcagct cgcgcaagac gtcctccacc
     2041 cgcccggtgt gccggcgcgc ggccgggcct ctcgcctccg cttccgcgac ggcacggcgg
     2101 tcgagctcca cgctttccac cgtagcacct agcctgacga gcctctccgt cgtctctccg
     2161 atgccggcat agagatccca caccttgcga cccgagacgt cgccgagctg ctgcacggcg
     2221 aattcccgga cccgatcgcc catctccgga tgcacctgct cgaatacggt agccgggtac
     2281 gcttcccccg ccccggctac ggtccgtgcc gccccaccct ccggctgcca ccaaatagtg
     2341 gcagcgacgc cgtcgcgttc catcgctcgg aacaggcgct gggctccgga ccacacctcg
     2401 ctctttccca ctcgcaagag caggtgccga ccgcccgacc gatcgagccg gagcacaacc
     2461 tgctcgagag ccggcggaag cagggtgcgc accttccgaa ccgcttgcca catcgtcatc
     2521 agctcgggga ctgtgatgtg gcaccagacg agatcgaaca cctggtctgg ccggtcgtag
     2581 cgatggagac cgatgcggcg ccccccggcg cccacgtgca gcgtcagctt ggtgcggtag
     2641 tcgtacggct ttgccgcggc gacaatgggt ggatccggca catcgcgctt accgagacgg
     2701 cggagtgcat cgccgacaaa agactggcgg gccgagagct gggcttgata ctccagatgc
     2761 tggagctggc aaccgccgca ctcgtccacc acgtagtggg gacagcgagg gtccactcgc
     2821 agaggcgagg actcgaccac ccgccggatt ctggcacggg cgaaccgctt atgctcgcga
     2881 atctcgccca gttcgaccag atcgcccgga gcggtgcgag gcacaaagac agtcttgccg
     2941 tcgggcagcc gccctacccc gtctccgccg gcggcaggac ggaggatacg gagctccgtc
     3001 accgaagggc ttcgccccgc gactgcctcg tccattggct gatggatgct tcgtcgggag
     3061 cgatggcggg ccgccgaccc tcgcgcagct catgctccgc cagcgtggcg gcgatggcaa
     3121 ggtcgtgaat accctcgggt gagctgatcg aggtgaggag atccggccgc cgctccagga
     3181 actggatgtc gatctcgccg cgttggaact cggcatcggc catcaaccgt cggtggaacg
     3241 cctggttcgt ggcgaccccg gtaaccacca gctcctccaa tgcgcgtctc atacgcgtga
     3301 gagcctggga acggtccggt gcccatacga tcagcttggc gagcatggag tcatagtaca
     3361 gcgtgacctc gtcaccggtc tcgacaccgc tgtcccaccg gattcccgga ccggccgggg
     3421 gcctcaggta ttcgatgcgt ccggtcgagg ggaggaagtt gttgccggga tcctcgctcg
     3481 tgatccggca ctcgatcgcc caaccccgcg gcgcgagccc cgacgagtga atccgcatcg
     3541 gcaacccggc cgcgattcga agctgttccc ggaccagatc gaccccgtac accagctcgg
     3601 tgactgggtg ctcgacctgg atccgggtgt tcatctccag gaagtagtac gatccatctc
     3661 ccgtcacgag aaactcgcag gtgcccgcgc tccgatatcc taccacccgc gccgccgcaa
     3721 ccgctgccgt tcccatccgc tcccggagct cggccgaaac cgcgacagag ggggcctcct
     3781 cgaccagctt ctgatgccgg cgttgaatcg agcactcccg ctcgccgagg tggatcgtgc
     3841 gctcatgatc ggcgagcacc tggatctcga tatggcgcgg ggcctcgatg aacttctcga
     3901 ggtacacgct ggcgtccccg aaggctttga gcgcttcgga tctggccgcg tcgaggccgg
     3961 ggtcgagtgc ctcagggccg cgcacgagcc gcatcccctt cccacctccg ccggcggccg
     4021 ccttgaccat cacggggtag ccaaggcggt ccgccgccgt cctcgccgcg tggctgtcgt
     4081 ttgccggcgg cgcggcgccg ggcacgatcg gtaccccagc cgcctccatc cggcggcggg
     4141 cctcggtctt gtcgcccatc gcccggatgg cctcggccgg tggcccgacg aacaccaaac
     4201 ccgcggcttc gaccgcctcc acgaacgcgg cccgctccgc cagaaagccg tagcctggat
     4261 gcacggcatc ggcaccggac gcgagcgcgg cggctagcag ccgctcgatc gagagatagc
     4321 tctgggacgg tgacgggggg ccgatggcta tcgcgaggtc ggcggcccgt acgtgcggac
     4381 tgccgc
//
LOCUS       DASYRV010000618         2445 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2688594, whole genome shotgun sequence.
ACCESSION   DASYRV010000618 DASYRV010000000
VERSION     DASYRV010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2445
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2688594"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2445)
                     /locus_tag="VGQ24_16295"
     CDS             complement(<1..>2445)
                     /locus_tag="VGQ24_16295"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEV8456454.1"
                     /translation="FQREIRFAARLQHPHILSVHDSGEAAGRLWFTMPYVEGESLRSR
                     LTREGQLPIEDALRIAREAADALDCAHRHGVVHRDIKPENILITEGHALLADFGISRA
                     LDASDERLTETGLVIGTPAYMSPEQVSGEPVSGRTDIYSLGVVLYEMLAGEPPFTGPT
                     AQAIIAKRMSGEIPSPRRLRPAVPEGVEQVVRKALAPLPADRFATAAELGRALATAAT
                     SPLPAATAFMAASTKPSRRRVPLSATGLVLGFLLGLGALFAWLHKNSAGDSAGPKRLA
                     VLPFENLGRPEDEYFADGITDEVRGKLATLPALQVIASASSSQYKRTAKPPQQTAREL
                     GVQYLLVGKVRWDQGSGGQGRVRVSPELVQVTGEGAPTTRWQQPFEAPLTDVFKVQAD
                     IADRVAQALDVALGSGERQALAERPTASIAAYDVYLKGEETSGKLSTAGMVALQRAAS
                     YYAEAVALDSGFGLGWVQLSRANSLLYFRGTGSNSTAEKALEAAERALALAPERPETY
                     LALGDYHANVSKEYAQALERYAQGRRLAPASADLLTATALAEQRSGRWDEALEHLDQA
                     RKLDPRSLFTARRFAFTLLWLRRYREATTAYDRALALDPGNPAGLEQRAMLFVMQGDL
                     PRAQAVLRAAPREADPTDLVAYVATYWDLVWLLDEEQQALLVKLNPGPFGNDRGGWGL
                     ALAQAYALRGDRSLSRAYADSARAAFEAQPRYKSGEADPRMYRAVALAYLGRHAEAIR
                     EGERVVAAQPISQDAYTGVYYQHLLVRIYILAGEPEKALDRLTPLLKIPYFLTPGWLR
                     IDPTFYPLRKHPRFQAL"
BASE COUNT          400 a          824 c          828 g          393 t
ORIGIN      
        1 gagcgcctgg aagcgcgggt gcttccgcag cgggtagaag gtgggatcga tccggagcca
       61 gccaggggtg aggaagtacg ggatcttgag caacggcgtt agccggtcca gcgccttctc
      121 gggctcaccc gcgagaatgt agatccggac gagcaagtgt tggtaataga ccccggtgta
      181 ggcgtcttgg gagatcggct gcgctgccac gactcgctca ccctcacgta tcgcctcggc
      241 gtggcgaccg agataggcca gggcgacggc ccgatacatc cgcgggtccg cttcaccgct
      301 tttgtatcga ggctgcgcct cgaaggccgc ccgggcagag tcggcgtaag cgcgggacaa
      361 gctccggtcg ccccggagag cgtaagcctg tgccagcgcc aggccccagc cgccccggtc
      421 gttgccgaac gggccggggt tgagtttcac gaggagcgcc tgctgctcct catccagcaa
      481 ccacacgagg tcccagtagg tagccacgta cgcaaccagg tcggtcggat ccgcctcccg
      541 cggcgcggct cggagcacgg cctgagcccg aggcagatcg ccctgcatga caaagagcat
      601 ggctctttgt tcgaggccgg cggggtttcc cggatccaga gccagcgccc gatcgtacgc
      661 cgtggtcgcc tcccgataac gccggagcca gagcagggta aaggcaaacc gtcgtgccgt
      721 gaacagggag cggggatcga gcttccgggc ctggtccaga tgctcaagcg cctcgtccca
      781 gcggcccgac ctctgctcag caagagccgt cgcggtgagc agatccgcgc tggccggggc
      841 caggcgccga ccctgtgcgt accgctccaa tgcctgagcg tactctttcg agacgttagc
      901 gtggtaatcg cccaaggcga ggtacgtttc gggtcgctca ggcgccaagg ccagcgcccg
      961 ctcagctgcc tcgagagctt tctccgccgt ggaattcgag ccggtgcccc ggaaatagag
     1021 tagagagttg gcgcgggaga gctggaccca cccgaggcca aagcccgagt cgagtgccac
     1081 cgcctcggcg taataggagg cagccctctg cagcgcgacc atgcccgcag tggataactt
     1141 gcccgaggtc tcttcaccct tgagatagac atcgtaggcc gcgatgcttg cggtaggccg
     1201 ctcggccaac gcctgccgct caccagagcc cagggcgaca tcaagcgcct gcgccacccg
     1261 atccgctatg tccgcctgca ccttgaacac atcggtgagc ggtgcctcga acggctgctg
     1321 ccatctcgtc gtgggtgcgc cctcgcccgt gacctgcacc aactcgggac tgacccgcac
     1381 tcggccttgc ccgcccgaac cctggtccca gcggaccttc cctaccagga ggtactgcac
     1441 gccgagctcc cgggccgtct gctggggcgg cttcgcggtg cgtttgtact gactcgagct
     1501 ggcactggcg atcacctgaa gggccggcag agtcgcgagc ttcccgcgca cctcgtcggt
     1561 gatgccgtcg gcgaagtatt cgtcctcggg tcggcccagg ttttcgaagg ggagtacggc
     1621 aagacgcttg ggaccagccg aatctccggc ggagttcttg tgcagccagg cgaacagcgc
     1681 gccaaggccc agcaggaacc cgagcacgag cccggttgcg ctcagaggga ctctgcgccg
     1741 gctcggcttc gtgctggctg ccatgaaggc cgtggccgca ggcagcggac tcgttgcggc
     1801 cgtcgccagg gcccggccga gctcggcggc cgtggcgaac cggtcggccg gcagcggagc
     1861 caatgctttg cgcaccactt gttccacgcc ttcggggacc gccggacgaa gccggcgggg
     1921 gctcggtatc tcgccgctca tgcgcttcgc gatgatggcc tgcgccgtgg ggccggtgaa
     1981 ggggggctcg cccgcgagca tctcgtagag caccactccc aggctgtaga tgtcggtgcg
     2041 gccgctcacc ggctcaccgc tcacctgctc ggggctcatg taggcgggcg tgccgattac
     2101 caaaccggtc tcggtcagcc gttcgtccga agcgtccagg gcgcggctga tcccgaagtc
     2161 cgccagaagc gcatgaccct ccgtgatgag aatgttctcg ggcttgatat cgcggtgcac
     2221 cacgccgtgc cggtgcgcgc agtccagcgc gtcggcggcc tcacgggcaa tccggagcgc
     2281 gtcctcaatc gggagctggc cctcgcgggt cagccgactc cgcagactct caccctcgac
     2341 atagggcatg gtgaaccaga gccggcctgc cgcctcgccc gagtcatgga ccgagagtat
     2401 gtggggatgc tggagtcggg cggcgaaccg tatctcccgc tgaaa
//
LOCUS       DASYRV010000619         3110 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2688916, whole genome shotgun sequence.
ACCESSION   DASYRV010000619 DASYRV010000000
VERSION     DASYRV010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3110
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2688916"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(373..882)
                     /locus_tag="VGQ24_16300"
     CDS             complement(373..882)
                     /locus_tag="VGQ24_16300"
                     /inference="COORDINATES: protein motif:HMM:NF016213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HEV8456455.1"
                     /translation="MTADLSPVLILIASGVIGLLLIPLGLPGLWVILLGIVGYGWLTD
                     FRTLSAGFLILAIALALLGEVFESWIGFRFAQRYGGSSRAGWGALVGGLIGAIVGVPV
                     PIIGSVIGGFVGAFVGAALFEYTRARRSGIAAKAGWGAVLGRAAAAAVKMAVGVVMVV
                     GALFVATRG"
     gene            1084..1716
                     /locus_tag="VGQ24_16305"
     CDS             1084..1716
                     /locus_tag="VGQ24_16305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456456.1"
                     /translation="MERVLVSAAAVLVLAACQPRTPEASKTDSAKPAATEAAVGTNEW
                     KIQEYTSAAPPAIAANATVLDWNDSLKAPATQIRKGSNGWTCMPLTPPPAGGYTNATQ
                     ASPMCGDSMTMLWGQGYLSKTKPKNTSMGIAYMLHGDIGTSNSDPYAMTPAGKSDWVV
                     TGPHIMVLPADPSRIAAVPTDYRTGQPFQMWKGTPYAHIMVPVGASEMRH"
     gene            complement(1762..2802)
                     /locus_tag="VGQ24_16310"
     CDS             complement(1762..2802)
                     /locus_tag="VGQ24_16310"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEV8456457.1"
                     /translation="MVRVETVARGLEHPWALEFLPDGRVLVTEREGRLRIVEPSGRVS
                     PPLAGVPEVYASGQGGLLDVALDPSFAENRLVYLSYAEPGEGGAGTAVARGRLGEGRL
                     EDLRVIYRQQPKVDGGNHFGSRLAFTRDGKLFVTQGERFSHRKQAQDLSSHLGKIVRI
                     NSDGTTPEDNPFVGRSGARPEIWSYGHRNVQAAAIHPESGQLWTVEHGARGGDELNHP
                     EAGKNYGWPVITYGVDYSGLKIGEGTAKEGMEQPVYYWDPVIAPSGMVFYTGDAFPGW
                     KGSVLIGSMQPGALVRLELAGGKVVREERYREGELGSRIRDVQQGPDGLVYVVTDEAN
                     GRLLRVLPARSQ"
BASE COUNT          612 a         1071 c          957 g          470 t
ORIGIN      
        1 gcgatagggt gacggctcat gatctcagcc ggcgccggct cgatgtgtgc aggtctgtca
       61 ttgagaggaa aatgccgcgt taacgcctat gggggaggga cgggaacgcg tgggcactag
      121 ccaccttgat ctgccatctt ccgcgcgctc tcaccacgaa ggcacgaagg tcacgaaggt
      181 cacgaagaaa atcaacaaca agacaacaag aacaacagga agaacaagaa aataagaaca
      241 acagcatgaa taagagcaac aacaacagtt cagtccttcg tgtccttcgt gtccttcgtg
      301 ccttcgtggt gaatgcgctc ggagtttagg ctgactcagg taggtggtgc cacgcaccca
      361 tatagcgtca tctcatccac gggtggcgac gaacagggct cccaccacca tcaccacccc
      421 cacagccatc ttcaccgccg ccgcggcggc gcgaccgagc accgcgcccc agcccgcctt
      481 cgccgctatc cccgagcgtc gtgcccgggt gtactcgaac agtgccgccc ctacgaacgc
      541 accgacgaag ccgccgatca ccgacccgat gataggaacc ggcactccga cgatggcccc
      601 gatcagcccg cccaccagtg ccccccagcc ggctcggctc gatccgccgt accgctgggc
      661 gaagcggaac ccgatccacg actcgaacac ctcgcccagc agggccagtg cgatggccag
      721 gatgaggaag ccggcgctca gggtgcggaa gtcggtgagc cagccgtagc cgacgatgcc
      781 gagcaggatg acccagaggc cgggcagccc gagtgggatg aggagcaggc cgatgacgcc
      841 gctggcgatc agtatgagaa caggggagag gtcagcggtc atgaactggc tgttggctgt
      901 tggctatggg ctgttggcaa tggacatcgg cgtcagaatc accatttagc caatagccaa
      961 tagcgaatag ccagcccggg cgggcttgcg acggagcctt cgcgcataca gaatattacc
     1021 gcccgacgtc tcccccgggt cggcgcacgc actgcagtat ccacggtcct aaggaggctc
     1081 gtcatggaac gcgtcctcgt ctctgcggct gccgttctgg tcctcgccgc atgccaaccc
     1141 agaacaccgg aagccagcaa gaccgactcc gcgaaaccag cagccaccga ggcggcagtg
     1201 ggaacgaacg agtggaagat ccaggagtat acgagcgccg caccgccggc tatcgcggcg
     1261 aacgccacag tgctcgactg gaacgattca ctcaaggctc ccgcgaccca gatccgcaaa
     1321 ggcagcaacg gctggacctg tatgccgctc acaccgccgc cggccggcgg gtacaccaat
     1381 gcgacccagg catctcccat gtgcggcgac tcgatgacga tgctctgggg ccaggggtat
     1441 ctcagcaaaa cgaaacccaa gaacacgtct atgggcatcg cgtacatgct ccatggcgac
     1501 atcggcacga gcaactccga tccgtatgcc atgacacctg ccgggaagag cgactgggtg
     1561 gtcaccgggc cccacatcat ggtgcttccc gccgatccaa gcagaattgc ggccgtcccg
     1621 acggattacc ggaccgggca gccatttcag atgtggaagg gaacgccgta tgcccacatc
     1681 atggtcccgg taggggcatc ggagatgcgg cactaggccc tgccggatgg cgagggccct
     1741 ctggcgattc agagaggaaa gtcattgcga gcgagccggc agaacccgga gcaggcgccc
     1801 gttggcttcg tccgtcacca catacaccag cccgtccggg ccctgctgca cgtcgcgaat
     1861 ccggctgccg agctcgccct cccggtaacg ctcctcccgc acgaccttcc caccggcgag
     1921 ctcgagccgt accaatgccc ccggctgcat cgagccgatg agcacgctgc ccttccagcc
     1981 ggggaacgcg tcgccggtgt agaagaccat ccctgagggc gcgatcaccg ggtcccagta
     2041 gtagactggc tgctccatcc cctccttcgc ggtgccctcc ccgatcttca aacccgagta
     2101 gtccacgcca taggtgatca ccggccagcc gtagttcttg cccgcctccg gatggttcag
     2161 ctcatccccg ccgcgtgcgc cgtgctcgac cgtccacagc tggccgctct ccggatggat
     2221 cgcagcggcc tgcacgtttc gatggccgta cgaccagatc tccggccggg cacctgaccg
     2281 gccgacgaac ggattgtctt ccggcgtggt accgtccgaa ttgattcgca cgatcttgcc
     2341 gagatggctg gagagatcct gggcctgctt gcggtggctg aaccgctcgc cctgggtgac
     2401 gaacagcttg ccgtcgcggg tgaacgcgag gcgggagccg aaatgattcc cgccgtccac
     2461 cttgggctgc tgccggtaga tgacccgcag gtcctccagc cggccctcgc ccagccgccc
     2521 gcgcgccacc gccgttccgg caccgccctc acccggctcg gcgtaggaga gatagaccag
     2581 ccggttctcg gcgaagctcg gatccaatgc gacgtccagc aggccaccct gcccgctcgc
     2641 gtagacttcc ggcactcccg cgagcggcgg agagacccgg ccgctcggct ccacgatgcg
     2701 gagccgtccc tcccgttcgg taacgagcac gcggccatcc ggcagaaact cgagcgccca
     2761 gggatgctcg agcccgcgag cgacggtctc gacccggacc acgccccggg tgggtttcgg
     2821 ggtcggcgag tgtggcgcct gcgcttggcc tggcgtcggt ggggaagcac aggaggccaa
     2881 cgagaccagg gccaagagcg tagcgctgcc acgacggagg agccgaactg ggagtctctg
     2941 catggttctg gaagctatcc cgagccgatc accaccgcga ccagctcccg ctcccgttcc
     3001 cggttgtcga ggttgatcgc caccacctgc tgccaggtcc ccagcgcgag ctccccgtcc
     3061 acaatcggca gcgacaggct ggtcctgagc agcgcggacc ggacgtgaga
//
LOCUS       DASYRV010000620         2504 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2689810, whole genome shotgun sequence.
ACCESSION   DASYRV010000620 DASYRV010000000
VERSION     DASYRV010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2504
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2689810"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(66..548)
                     /locus_tag="VGQ24_16315"
     CDS             complement(66..548)
                     /locus_tag="VGQ24_16315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456458.1"
                     /translation="MTGPRPERKAPGGPLLAVLVLVIAVLAGGIAGVAADRLILLPQM
                     HRGPWHGPGGPRGGPPRDREFRERFAKEVGLTPDQQTRIDSIMDRQGRELRAVRGQVQ
                     PQLDSIITHTRRALDSVLTPEQRKKAEAIRKRHPPPGPPPGGFPGGPGGPEGPPPRPR
                     "
     gene            complement(545..958)
                     /locus_tag="VGQ24_16320"
     CDS             complement(545..958)
                     /locus_tag="VGQ24_16320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456459.1"
                     /translation="MSWLFRDPERDPELERALQRIETARETGDLEALRRRILAAARPR
                     LARLGAPALRWWEWISTWTRVAIPVGLAASLAAGLLIRAGGTATAFSSYSTDMGSDST
                     LVLAAFSEPASGSWFTAHLIAPEGNDWLLEQAVSQ"
     gene            complement(955..1539)
                     /locus_tag="VGQ24_16325"
     CDS             complement(955..1539)
                     /locus_tag="VGQ24_16325"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEV8456460.1"
                     /translation="MIAAGAMSAGAGDAGEPIDDRELLVRVQGGDARAFDALVQRYLP
                     RARMLARRLMADPDDADDLVQDAFLRALDRIATFDVGRAFGPWFTRLLINTGIDQRRK
                     QAVRRTESQDPETFAGKSSPYRDAERAELRQSLDNALQKLPDRQRLIVSLFEIDGHST
                     EEVASMLSVSQVTVRWHLHQARRTLREALKGWTE"
     gene            2065..2487
                     /locus_tag="VGQ24_16330"
     CDS             2065..2487
                     /locus_tag="VGQ24_16330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456461.1"
                     /translation="MRHRDGQHRMISREVLDGPPAPAVLRDSIGLSGDQLQRYAQRYS
                     NYMTETGPVRDSLRTSIRALRAAFERGDRSEARSRRDGLERQSNELAKRDKAFEKMLK
                     QDLSKDQQKRYDTWKESRQRAERKHRQHMPGPQPPGNL"
BASE COUNT          424 a          873 c          805 g          402 t
ORIGIN      
        1 tcggtggcgg tcttcctcga cgagctcgat atcctgacct ggtaacccaa cgatagcgcc
       61 acgcctcacc gaggcctggg cggcggaccc tcgggtccgc cgggcccgcc gggaaatccg
      121 cccggcggcg gaccgggggg aggatgccgc ttccggatcg cctccgcttt cttccgctgc
      181 tccggtgtga gcaccgaatc gagcgctcgg cgggtatggg tgatgatcga gtcgagctgc
      241 ggctgaacct gcccccgcac cgcgcgtagc tcgcgcccct gccggtccat gatcgagtcg
      301 atcctggtct gctgatccgg cgtcagtccg acctccttcg cgaaacgctc ccggaactca
      361 cgatctctcg gcggccctcc acggggcccg ccgggaccgt gccaaggacc acgatgcatc
      421 tgcggcagca ggatgagccg gtcggccgcg acgcccgcga ttccacccgc cagaaccgca
      481 atcacaagca ccagaaccgc cagcagcggc ccaccgggcg ccttccgttc cgggcgtggg
      541 ccggtcattg gcttaccgcc tgctccagca gccagtcgtt gccttccgga gcgatgaggt
      601 gggcggtgaa ccagcttccc gatgcgggct cggagaaagc ggccaggacc agcgtgctgt
      661 cggagcccat gtccgtgctg tagctgctga acgcggtcgc ggtgccgccg gcccgaatca
      721 gcaggccggc ggcgagagac gcggccaggc cgaccggtat ggcgacccgg gtccaggtcg
      781 agatccactc ccaccaccga agcgccggcg cgccgagccg ggccagcctt ggccgggccg
      841 ccgccagtat cctgcgccgc agtgcttcga ggtcgcccgt ctcccgcgcg gtctcgattc
      901 gctgcagggc cctctccagc tccggatccc gctccggatc gcgaaacaac cagctcattc
      961 cgtccatccc ttcagcgcct cgcgcagcgt tcgcctggcc tgatgcagat gccaccgtac
     1021 cgtcacctga ctcacgctga gcatgctggc cacctcttcg gttgagtgtc cgtcgatctc
     1081 gaacagggag acgatgagcc gctggcgatc ggggagcttt tgaagcgcgt tgtccagaga
     1141 ttgacgcagc tcggcccgct cggcatcccg gtaagggctc gattttccgg caaacgtctc
     1201 cggatcctgc gactcggtcc ggcgcaccgc ctgctttcgc cgctgatcga tgccggtgtt
     1261 gatcaagagc cgggtgaacc aggggccgaa tgctcgcccc acatcgaagg tcgcgatccg
     1321 atccagcgcc cggagaaacg cgtcctgcac cagatcgtcg gcgtcgtcgg gatccgccat
     1381 caggcgtctg gccagcatgc gcgcccgcgg caggtagcgc tgcaccaggg cgtcgaacgc
     1441 cctggcatcg cctccctgca cccggaccag gagttctcga tcgtcgatcg gctcaccggc
     1501 gtcacctgcg ccggcggaca tcgccccggc ggcgatcatg ctggttctat ctccgactcc
     1561 tgacgttggg ggactcgggt ctgccgggtg gtggtgaccc ccgccctcac gatgtcatat
     1621 acgcatcatg gggccacagc gttgggaaag ttgggagctg gatgctcggg tgatggtcac
     1681 cctgagggcc tgaaaggccc gagggggcgg gacctcacgg ttcatagatc tggtcggtga
     1741 ccacgaacgg attctatgtg aagcggagtc ttggccccct cgcgtcgctc agggtgacaa
     1801 ccaccctagc atccagcccc aactcccagc tcccaacgaa tctggggcac cgctcgtatc
     1861 tcgcaaagac ggcaatagcg acaacaacac ccgaacccga ggttgaccat gtccatcgca
     1921 ggaaagccat cgaagctcac gagcgcggct gtttggctcg ggctcacctt ggccctttta
     1981 gtcggcattg ccgggtcgcc cttcgcgcag agcggccccg gagggtacgg accgggtccg
     2041 ggcccgggac cgggcggcgg aggcatgcgg caccgggacg gccagcaccg gatgatctca
     2101 cgggaagtgc tcgatgggcc ccccgccccg gccgtcttgc gggattccat tggcttgagc
     2161 ggagaccaac tccagcgcta tgcccagcgt tactccaact acatgaccga gaccggaccg
     2221 gttcgcgaca gcctccggac ctccattcga gccctgcgtg cggccttcga gcgcggcgac
     2281 cgctccgaag cgcgcagtcg ccgtgacggt ctcgagcgac agtctaacga gctggccaaa
     2341 cgggacaagg cgttcgagaa gatgctcaaa caggacctga gcaaggacca gcagaaacgc
     2401 tatgacacgt ggaaggagtc acgacaaagg gcggaacgga agcatcgcca gcatatgccg
     2461 gggccgcagc ctccaggcaa cctttagccg gttagcaggc tctc
//
LOCUS       DASYRV010000621         9634 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3524128, whole genome shotgun sequence.
ACCESSION   DASYRV010000621 DASYRV010000000
VERSION     DASYRV010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9634
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3524128"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            108..623
                     /locus_tag="VGQ24_16335"
     CDS             108..623
                     /locus_tag="VGQ24_16335"
                     /inference="COORDINATES: protein motif:HMM:NF012360.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HEV8456462.1"
                     /translation="MRPPSIHPTAFIASTAAVMGDVTLGEDASVWYGAVLRGDMAPIV
                     IGAQSNIQDGTVVHVDEEAPCHVGQRVGVGHRVILHGCIVEDDCLIAMGSVLLNGVVI
                     GSGSVVAAGAVVPEGMRVPPRSLVMGVPGRIVRQVDAVLAERVSATWSHYVEEAKAHK
                     AGHYPLVREGR"
     gene            862..3405
                     /locus_tag="VGQ24_16340"
     CDS             862..3405
                     /locus_tag="VGQ24_16340"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12-dependent ribonucleotide reductase"
                     /protein_id="HEV8456463.1"
                     /translation="MKSSTPRDAVRLSPNAITVLEKRYLLKDETGAPIESPRDLFWRV
                     ARTVAVAEKRYGAGESKVTEVAQEFFDLMAQRLFVPNSPTLMNAGRPLGQLSACFVLP
                     VDDALSNGKSGIYDTLRAMALVHQSGGGTGFSFSRLRPKNDIVRSTMGVASGPVSFMS
                     LFDASTDVVKQGGTRRGANMGILRVDHPDILEFITCKDDTSKITNFNISVAVTDAFMA
                     AVEANGMYDLIHPKTGQVTSQLHAREVWEMIIHGAWKTGEPGVFFVDKANYYNPVPHL
                     GAYEATNPCGEQPLLPYDVCNLGSVNLGVFVKDGKDGKDGKDGKDGKDGKEIDWENLR
                     RVVHLSTHFLENVIDANQYPLSEITDLAQRIRRIGLGVMGLADVFVKLGVPYDSDEGV
                     ALGRRIQQFVDEEAKVESERLAGERGVFPEWERSIWGPDETAARDGNGQRIRPMRRLR
                     NCNVTTVAPTGTISIIAGCSSGIEPLFAVAFMRNQAGVLMPDVNEDFVAIARAEGWYS
                     DDLMRRIAEAGHIDFPEVPAQWQRVFVTANGIKPEWHIRMQAAFQEFNDSAISKTCNF
                     AHDATEEYVEEIYRLAYRLNCKGVTVYRDGSREMQVLSTGSTARRVKEGHGKDGKDGK
                     GGKENVATADLHGEIAELRSENERLLRTVHELEAENLQRRQKRSRPEVLRGTTRRVET
                     PLGTLYVTITEDDKGQPFEVFMTLGKAGGALMADVESLGRLISLALRSGIPIKEIYRQ
                     LRGISSDRVIGLGPNKILSVPDAVGIAIERWMQEKQGIQQELLPHAGQPELAPLVSQP
                     VSQGTGRGEQMIFGGMQQMLSGACPDCGSQLEFAEGCMKCHVCGFSECG"
     gene            3512..4021
                     /locus_tag="VGQ24_16345"
     CDS             3512..4021
                     /locus_tag="VGQ24_16345"
                     /inference="COORDINATES: protein motif:HMM:NF019325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CARDB domain-containing protein"
                     /protein_id="HEV8456464.1"
                     /translation="MFSSCRLAAATRRLLLMSGLLTACEVTSLELQSPGTPGGPDSLK
                     ADLSPGPIEVPGSIRLDVLLPMRVGVRNNGDRIAGPGWFLRVFLSSDAQIDSSDHLIE
                     QFVATRELRSGAQDVYLRNIKLSGVGPGDYYIGSIIDVTDAVPELDETNNTLATPGRI
                     RLLPLVADP"
     gene            4174..4446
                     /locus_tag="VGQ24_16350"
     CDS             4174..4446
                     /locus_tag="VGQ24_16350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456465.1"
                     /translation="MSVDKQEGALKPVTPARVAEELKKLSAQRKDGKLEPDEYEHRFA
                     RMITELRERRIDGSRAEILGTLTPLKDQGIISLVDWQRLTKQLGLA"
     gene            4443..5369
                     /locus_tag="VGQ24_16355"
     CDS             4443..5369
                     /locus_tag="VGQ24_16355"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEV8456466.1"
                     /translation="MSLEPEHVGHAGVQRAVIGRRRLGRDAPLVSAVGYGGMHLSIQG
                     RPPEEQGVRVIHAALDAGVTLIDTADVYCLDNQDIGHNERLVARALASWQGDRDQVIV
                     ATKGGVTRPAGRWETDGSRQHLRAACERSLEALGVERIDLYQLHAPDPKVPLAESVGA
                     LAELQQEGKVRWIGLSNVSVAEIREAESIVPVTTVQNRLNPFFREALAEGVVAHCTER
                     GIGFLAYSPTGGGRLNLKLPAHPVLQPMAARLGTTPHALVLAWELARSPSVIVIPSAR
                     TVEHALDSVSAADLTLSEADLAAITTAEFSRA"
     gene            complement(5390..6391)
                     /locus_tag="VGQ24_16360"
     CDS             complement(5390..6391)
                     /locus_tag="VGQ24_16360"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: protein motif:HMM:TIGR00747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HEV8456467.1"
                     /translation="MSEPSTLRRAAISAVASYVPERIVTNAELAKRLDTSDDWIVTRT
                     GIRERRMGGPGETTSTMAAEAVRRLMTRRDLGADDVDALIVATATPDMMFPATACLIQ
                     NQLGLRRVWGFDLSAACSGFLYAMTVGAQLVAAGAHERVIVVGADLMSSIIDPLDRTT
                     AVLFGDGAGAALLEPAEPGYGVLDFYHRADGSGRNDLLMPAGGSSLPASAATVAARQH
                     FLKQNGKVVFKFAVTQMVESVNVLLQRNGLTASDLTLLVPHQANQRILDAVAERLCVP
                     HERVASVLARYGNTTGATLPLALDAALAEGKIKRGDLVVFTAVGAGFTAGATLVRWA"
     gene            6474..7733
                     /gene="ispG"
                     /locus_tag="VGQ24_16365"
                     /gene_synonym="gcpE"
     CDS             6474..7733
                     /gene="ispG"
                     /locus_tag="VGQ24_16365"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEV8456468.1"
                     /translation="MPSITRRQTVTATIGGVSVGSGHPIVVQSMTNTDTADVAATVRQ
                     VAELASAGSELVRVTVNNEESAAAVPAIVDRLEDMGLTVPIIGDFHYNGHLLLARYPD
                     CARALAKYRINPGNVGGKRRDENFRAIIDIALANNKPVRIGVNWGSLDQNLLTEMMDT
                     NASLAAPREARAVVMEAMVESALQSAALAEATGMPHDRIVLSAKVSGVQDLVEVYRLL
                     GARCDYPLHLGLTEAGLGSKGIVASTAGLSLLLQEGIGDTIRVSLTPVPGGDRSEEVR
                     IAQQILQSLGLRSFTPQVTACPGCGRTTSTFFQQMAQDIQEYLRERMPTWRAEHPGVE
                     EMKVAVMGCVVNGPGESKHADIGISLPGTFEDPKAPVYVDGRLVVTLRGENIVAEFLA
                     ILDDYVASRYGAGEPAGGRLGHTGSLL"
     gene            7733..8230
                     /locus_tag="VGQ24_16370"
     CDS             7733..8230
                     /locus_tag="VGQ24_16370"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEV8456469.1"
                     /translation="MSPLRAVVPCFMVLLGAQQLSGQDAALDVGDRAPRVVVHDLDGK
                     PVDLGRYIGAKPVFLEFWATWCESCQELLPRVRAAQKAYGSRVEFIGVNVAVNQSPAS
                     VRRYLEAVDPGFRTLYDDEGTSTRAYQVPATSYVVIVGRSGKIVYTGIGGTQSFDRVL
                     RQVSE"
     gene            8260..8850
                     /locus_tag="VGQ24_16375"
     CDS             8260..8850
                     /locus_tag="VGQ24_16375"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEV8456470.1"
                     /translation="MRLFALLSLLAGLQITGVPVASAQNKKPENVTAVLLGGPDVGRR
                     APDFSLPWATKDGVGPIEAPYQLAGDRGKIVVVAFYPRDFTNGCTAEMRTFAQQYDSL
                     FGPDVVLVGISADSIETHQRFASSLNLPFRLLSDPDQRVSKQYASKDKGGYNRRTVYV
                     IGPDGRVKFRNMRFNALDPRDYAELRRAIKAPGGES"
     gene            9011..>9634
                     /locus_tag="VGQ24_16380"
     CDS             9011..>9634
                     /locus_tag="VGQ24_16380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456471.1"
                     /translation="MRFLVDPELAARELKQGFLLLRADQDETLHSALRQVIQTQPEFA
                     PWAPSSLCFYYTDAVKVGGRRIAENNPRIAQMVGVWSLATVEQGSGARRDLVLDMYAS
                     RERLRTAAAANLVQLHEAEVGFRGATDTSGTEYRQTMGKTQLVWSGRTAGDSIRLERP
                     IVETWQVAGVRGVTWSAQLSLSPAWGRALVGSLRVEGKGDLAKALKAS"
BASE COUNT         1704 a         3028 c         3189 g         1713 t
ORIGIN      
        1 ttcgtctgga ccgtgacctg gcatcccgcc ctcaaggacg gagcgccggt cgaggcctgg
       61 acccaaatgc ttttcccgcc ggcccgagac caataggggc gcattgcatg cgccctccct
      121 cgattcaccc cacagccttc attgcgtcca ccgcggccgt gatgggagac gtcacgctgg
      181 gtgaggatgc gagcgtctgg tatggtgccg tgctccgcgg cgatatggcg ccgatcgtga
      241 ttggggccca gtcaaatatc caggacggca ccgtcgtgca cgtggatgaa gaggccccct
      301 gtcatgtggg gcaaagggtt ggagtagggc accgggtcat tctccacggc tgcatcgtgg
      361 aggatgattg cctgatcgcc atgggtagcg ttctgctgaa cggtgtcgtc atcggtagcg
      421 gcagtgtcgt cgccgctggc gcggtcgtgc cggagggcat gcgagttccg cctcgctcgc
      481 tggtcatggg agtgccggga cgcatcgtcc gccaggtcga tgccgtgctc gccgagcggg
      541 tgtctgccac gtggagccac tacgtggagg aagcgaaggc ccacaaggca gggcactatc
      601 cgctggtgcg ggaggggcgg taaggcgtcc tctccgtccg ctcgtctttt tcctcagaca
      661 tccacgttct ccacatatcg acaagcgact atatttgtga tgtgaacagc gggatgggac
      721 gcagtgccgt acgttttttg tggtattgtc tcgatcgtgt cacgggccta gcttggcctt
      781 ccgtttcggt tgggaagtgc gatggtgcag cagggtcgcc cccaccctct tcgtgatcat
      841 cctgccaagg cgaggagttc tatgaaatcg tccaccccga gggacgcggt ccggctgtcg
      901 cctaatgcga ttacggtcct cgagaagcgc tatctcctca aggacgagac tggcgctccc
      961 atcgagagtc cccgagacct gttctggcgg gtggcgcgaa ccgtggccgt ggcggagaag
     1021 cgatacggcg ccggtgagtc gaaggtgacg gaggtggctc aggagttctt cgacctcatg
     1081 gcccagcgcc tcttcgtgcc caactcgccg accctgatga acgcaggccg tcccctgggc
     1141 cagctctcag cctgcttcgt gctcccggtg gatgacgcgc tctccaacgg gaagagcggc
     1201 atctacgata ccctgcgcgc catggcgttg gtgcaccagt cgggcggcgg gaccggcttc
     1261 agcttctccc ggctccgtcc taagaacgac atcgttcgct cgaccatggg cgtggcgtcc
     1321 ggcccggtgt cattcatgag cctcttcgat gcttccaccg acgtggtcaa gcagggcggc
     1381 accaggcggg gggccaacat ggggatcctg cgggtagacc atcccgatat cctggagttc
     1441 atcacctgca aggacgacac gagcaagatc acgaacttca atatctcggt tgcggtcacc
     1501 gacgcattca tggcggcggt cgaagccaac ggtatgtatg acttgatcca tcccaagacc
     1561 ggccaggtca ctagccagct tcatgcccgg gaggtctggg agatgatcat ccacggcgcc
     1621 tggaagaccg gcgagccggg cgtgttcttc gtggacaagg ccaactacta caatccggtg
     1681 ccccacctgg gcgcctacga ggccaccaac ccgtgcggcg agcagccgct gctgccgtac
     1741 gatgtctgca acctcggctc cgtcaacctc ggggtgtttg taaaggatgg gaaggatggg
     1801 aaggatggga aggacgggaa agacgggaaa gacgggaagg agatcgactg ggagaacctc
     1861 cgtcgggttg tgcatctctc gacccatttc ctcgagaacg tgatcgacgc caaccagtat
     1921 cctctgtccg agattaccga cctggcgcag cgcatccggc gaatcggact cggcgtcatg
     1981 ggtctggccg atgtgttcgt caagctcggc gtgccgtacg actcggacga gggggtggcc
     2041 ctcgggcgcc ggattcagca gttcgtggat gaggaagcca aggtcgaatc ggagcgactc
     2101 gcgggcgagc ggggagtgtt tcccgagtgg gagcggagca tctggggtcc ggatgaaacc
     2161 gccgcccggg acggcaacgg tcagcggatc cgccccatgc ggagactccg caactgcaac
     2221 gtgacgaccg tggcgcctac cggcacgatc tccatcatcg ccggatgcag ttcgggcatc
     2281 gagccgctgt tcgcggtggc cttcatgcgg aaccaggctg gcgtgctgat gccggacgtg
     2341 aacgaggatt tcgtcgccat cgccagggcg gagggctggt actccgacga tctcatgcgc
     2401 aggatcgccg aagccgggca catcgacttt cccgaggtgc ccgcccagtg gcagcgggtc
     2461 ttcgtgaccg cgaacgggat caagcccgag tggcacatcc ggatgcaggc ggcattccag
     2521 gagttcaacg atagtgccat ctcgaagacc tgtaacttcg cccacgacgc caccgaggag
     2581 tacgtagagg agatctaccg cctcgcctac cggctgaact gcaagggcgt gacggtgtac
     2641 cgcgacggaa gccgggagat gcaggtgctg tccaccggct ccacggccag gagggtcaag
     2701 gaagggcatg ggaaagatgg gaaagacggg aagggcggga aggaaaacgt cgcgacggcc
     2761 gatctgcatg gcgagattgc cgagctccgc tcggagaacg agcggctact ccggacggtg
     2821 cacgaactcg aggccgagaa ccttcagcgg cgacaaaaac ggtcccgtcc cgaggtcctt
     2881 cgcggaacca ctcgacgggt cgagactccg ctcggaaccc tttacgtcac gatcaccgag
     2941 gacgacaagg gtcagccgtt cgaggtcttc atgacgctgg gcaaggccgg cggcgctctc
     3001 atggccgacg tcgagtcgct cggccggttg atcagcctgg cgctccgctc gggcattccg
     3061 atcaaggaga tctatcgtca gctccggggc atcagctcgg accgcgtcat cggcctgggt
     3121 ccgaacaaga tcctctcggt tccggacgcc gtgggcatcg ccatcgagcg ctggatgcag
     3181 gagaagcagg gcatacagca ggagctgctg ccccatgcgg gccagcccga gctcgcgcca
     3241 ctggtatccc agccggtatc tcagggcact ggccggggcg agcagatgat cttcggtggg
     3301 atgcagcaga tgctctcggg tgcctgcccc gactgcggct ctcagctcga gtttgccgaa
     3361 gggtgcatga agtgccacgt gtgcggcttc agcgagtgcg ggtgatcgtg gtcatccgta
     3421 gatagcgccc agccgcacag gacaacgccc gctgaccccc aaggtcggcg ggcgttggcg
     3481 tatattgtgg acgggaactc tggagggtgt catgttctcg tcctgccgtt tggctgccgc
     3541 aacccgccgg ctgctgctga tgagcgggct tctcaccgcc tgcgaggtta cctcactcga
     3601 gcttcagagt cctggcaccc ccggcggtcc ggattcgctg aaggccgatc tttcgcccgg
     3661 gccgatcgag gtgcccggaa gcattcgcct cgatgtgctg ctgccgatga gagtaggggt
     3721 aaggaacaat ggcgaccgaa tcgccggccc cggctggttt ttacgtgtct tcctctcgag
     3781 cgacgcgcag atcgattcgt ccgatcacct gatcgagcag ttcgtggcca cccgggagct
     3841 tcgctcggga gctcaggatg tctatctccg taacataaag ctctccggtg tcggtcccgg
     3901 cgactattac atcgggtcga tcatcgacgt gactgacgcc gttcccgaac tcgatgaaac
     3961 aaataacacg cttgccactc ctgggcggat caggctgctc cccctggtgg ctgacccgtg
     4021 aagacgagct cgccaaggca ccctatatgc tacggcccga ccgccgacgt gacttggtcc
     4081 ggtgccgatc ccggcctcac tctggacgcc gcgcgccggc cccagccata atgcagtcga
     4141 tggatccact gtctacggct tcggaggtac gatatgtcgg ttgataagca ggagggcgcc
     4201 ctcaaaccag tgacgcctgc gcgcgtcgcg gaagagctca agaagctgag tgcccaacgg
     4261 aaggacggga agctggaacc cgacgaatac gagcaccgct tcgcgcgcat gatcaccgag
     4321 ctgcgtgaac gacgcatcga cggcagccga gcggagatcc tcggtaccct gacgccgctc
     4381 aaggatcagg gcatcatctc cctcgtggac tggcagcggc tgaccaagca gctgggtctc
     4441 gcatgagcct ggaaccggag cacgttggcc acgccggtgt ccagcgtgcg gtcattgggc
     4501 gccgccggct ggggcgcgac gctccgctgg tttcggcggt gggttatggc ggcatgcatc
     4561 tatcgattca gggtcgcccc ccggaggagc agggcgtccg ggtgatccat gcggcgctgg
     4621 atgccggagt cacgctcatc gacacggccg acgtctactg cctcgacaac caggatatcg
     4681 gccataacga gcggctcgtg gcccgtgccc tggcgagctg gcaaggtgac cgtgaccagg
     4741 tcattgtggc gacaaagggc ggcgtgacga ggcctgccgg ccgctgggag accgacggca
     4801 gtcgccagca tctccgagcc gcctgcgagc gatcgcttga ggcactcggg gttgagcgca
     4861 tcgacctcta tcagctgcat gcgcccgacc cgaaggttcc cctggcggag agtgtcgggg
     4921 ccctcgccga gctccagcag gaggggaagg tccgctggat cgggctctcg aatgtctcgg
     4981 tggcggaaat ccgggaggcc gagtcgatcg tcccggtgac cacggtgcag aaccggctga
     5041 atccattctt tcgtgaggcg ctggccgaag gggtggtggc gcactgtacc gagcgaggga
     5101 tcggattcct ggcctacagt ccaaccggcg gggggcgtct caacctgaag ctcccggcgc
     5161 accccgtgct tcaacccatg gccgcgcggc tcggcaccac gccccatgcg ttggtgttgg
     5221 cgtgggagct ggctcgttcg ccgtcggtga tcgtaatacc aagtgcccgc accgtagagc
     5281 acgcgctcga cagcgtgagc gccgccgacc tgaccttgag cgaggccgac ctggcggcca
     5341 tcacgaccgc cgagttctcg cgggcgtagg ggtcgaccgc agtcgaccct tacgcccacc
     5401 gcaccagcgt cgcacctgcc gtgaaccccg cgccgaccgc cgtgaacacc actagatcac
     5461 cccgtttgat cttcccctcg gccagggccg catccagcgc cagcgggaga gtggccccag
     5521 tggtgttgcc gtagcgggcc agcaccgacg ccactcgctc gtgcggtacg cacagccgct
     5581 cggccaccgc atccaggatc cgctggttgg cctggtgggg aaccaggagc gtcagatcgc
     5641 tcgcggtgag tccgtttcgt tgcagcagga cgttcacgct ctcgaccatt tgcgtaacgg
     5701 cgaacttgaa gaccactttc ccgttctgtt tgaggaaatg ctggcgggcg gcgacggtgg
     5761 ctgcgctcgc cggcagcgag cttccgccgg cgggcatgag caagtcgttc cgaccgctgc
     5821 catcggcccg atgatagaaa tccagcacac cgtatccggg ctcggcaggc tcgagcagtg
     5881 ccgcaccggc accgtctccg aagagcacgg cggtggtgcg gtcgagcgga tcgatgatcg
     5941 agctcatgag gtccgcaccg acgacaatga cccgctcgtg tgcacctgcg gccacgagct
     6001 gcgcacccac ggtcatggcg tagaggaagc ctgagcacgc ggccgagagg tcgaatcccc
     6061 atacccggcg gagtcccaac tgattctgga tgaggcaggc ggtcgcgggg aacatcatgt
     6121 cgggcgtggc ggttgccacg atcagcgcgt ccacgtcgtc ggcacccagg tccctgcgag
     6181 tcatcagtcg ccgcaccgcc tcggcagcca tggtcgaggt ggtctcgccg gggccgccca
     6241 tccggcgctc gcgaatgccg gttcgggtga cgatccagtc gtccgaggtg tcgagtcgct
     6301 tggcgagctc ggcgttggtg acaatgcgct cgggcacata gctcgccacg gctgaaatcg
     6361 ctgcgcgccg cagggtggag ggctcagaca tgcccgaatc tcgtccagac cgggaatccg
     6421 acgcaagcgt cgccgccatc ggctaatgct ttcctctggt tatatttgcc accatgccgt
     6481 ccataacccg ccgtcagact gtgactgcca caatcggtgg tgtctcagtc ggttccggtc
     6541 acccgatcgt cgttcagtcg atgaccaata ccgatacggc cgacgtggcc gccaccgttc
     6601 ggcaggtggc ggagctagcg agcgccggca gcgagctggt gcgggtcacc gtgaataacg
     6661 aggagtccgc ggcggctgta cccgccatcg ttgaccggct cgaggacatg ggcctcacgg
     6721 tgccgatcat cggcgacttc cactacaacg ggcacctgct cctcgccagg tatccggact
     6781 gcgcgcgggc gctggccaag taccggatca atccggggaa tgtcggcggg aagcgccggg
     6841 acgaaaactt ccgcgccatc atcgacatcg cgctagcgaa taacaagccc gtgcgcattg
     6901 gcgtcaactg gggatcgctc gatcagaatc tgctgaccga gatgatggat accaacgcgt
     6961 ccctggccgc gccgcgggag gccagggcgg tggtgatgga agccatggtc gagagcgcgc
     7021 tacaatccgc cgcactggcc gaggcaaccg gtatgcctca cgaccgcatc gtcctcagcg
     7081 ccaaggtatc gggagtccag gatctggtcg aggtgtatcg gctgctgggg gccaggtgcg
     7141 actatccctt gcatctggga ttgaccgagg cggggctcgg cagcaagggc atcgttgcca
     7201 gcaccgccgg gctgagcctt ctcctgcagg agggcattgg cgacactatc cgggtttctc
     7261 tcacccccgt tcccggggga gaccgcagcg aggaggtccg gatcgcccag cagatcctcc
     7321 agtccctcgg cctcaggagc ttcacccctc aggtcaccgc gtgtcccggc tgcggtcgta
     7381 cgacgagcac tttctttcag cagatggcgc aggacatcca ggagtatctg cgcgagagaa
     7441 tgccgacctg gcgcgccgag caccccggtg tggaggagat gaaggtggcc gtcatgggct
     7501 gcgtggtgaa cggacccggc gagtcaaagc acgcggacat cggcatctcc ctgcccggca
     7561 ccttcgaaga tcccaaggcg cctgtgtacg tcgacggccg gctcgtcgtc accctacggg
     7621 gtgaaaatat cgtggccgaa ttcctggcga tcctggacga ctacgtggcg tctcgctacg
     7681 gggcaggcga gcccgccggg gggcggttgg gacatacggg cagcctgctc tgatgagccc
     7741 gctcagggcc gttgtgcctt gcttcatggt gctgctcggc gcgcaacagc tcagcggtca
     7801 ggatgccgca ctcgatgtgg gggacagggc tcctcgcgtc gtcgttcacg acctggatgg
     7861 gaagcccgtc gatctgggcc gctatatcgg cgccaagccg gtctttctgg agttctgggc
     7921 cacgtggtgc gaatcctgcc aggagctgct gccgcgggtt cgtgccgccc agaaagccta
     7981 cggatccagg gtcgagttca tcggcgtcaa tgtcgccgtg aaccagtctc ccgctagcgt
     8041 ccgacggtac ctggaggcgg ttgaccctgg tttccgtacg ctctacgacg acgagggaac
     8101 cagcacccga gcctaccagg taccggccac atcttacgtc gtcatcgtgg gccgctcagg
     8161 caagatcgtg tataccggga tcggcggtac ccagagcttc gatcgggtgc tccgccaggt
     8221 cagcgaataa ttctccatta cagcaaggat cgattctcca tgcgtctctt tgctcttctg
     8281 tctctcctag cgggactcca gatcactggt gtgcccgttg cgtcggctca gaacaagaag
     8341 cccgagaacg tcaccgctgt cctgctcgga ggacccgacg taggacgacg cgctccggac
     8401 ttctcgctcc cctgggccac caaggacggt gtcggcccca tcgaggcgcc gtatcaattg
     8461 gccggcgatc ggggcaagat cgtggtcgtg gcgttctacc ctcgggactt taccaatggg
     8521 tgcacggctg agatgcgcac cttcgcccag cagtatgaca gcctgttcgg acccgacgtc
     8581 gtgctagtgg ggatcagcgc cgattccatc gagactcacc agcggttcgc ttcgagcctg
     8641 aatctgccgt tccggttgct gagtgatccg gaccagcggg tatcgaaaca gtacgccagc
     8701 aaagacaagg gcggctataa caggcgcacg gtgtacgtga tcggtcccga cggaagggtg
     8761 aagttcagga acatgaggtt caacgcgctg gatccgcgtg actatgcgga gctccgccgg
     8821 gccatcaaag cgcctggcgg cgaaagctga cgtaactaac tccctgagct gttgaggtct
     8881 tatcctcacc cgtttaggcc tgggcgtcgc tctggccacc tgctgtgctt cctcacttgg
     8941 cgcccagact ggcagccaag ccaaggatga gcggatctgg gaccttcagg ggctccgggc
     9001 agggtactgc gtgcgcttcc tcgttgatcc cgaactggcg gctcgcgagc tcaagcaggg
     9061 atttctgctc ctccgcgccg atcaagatga gaccctgcat tctgcgcttc gccaggtgat
     9121 tcagacccag ccggagttcg ccccctgggc accctcgagt ctctgcttct actacaccga
     9181 cgcggtcaag gtgggcggcc gccggattgc agagaataat ccccgaattg cgcaaatggt
     9241 cggggtctgg agcctggcaa cggtcgaaca ggggagcggt gcccgacgcg atctcgtgct
     9301 cgacatgtac gcgagccggg agcggctcag aacggccgcg gcggcgaacc tggtgcaact
     9361 gcacgaagct gaggtgggct tccgaggcgc cacggacacc agcgggactg agtaccgcca
     9421 gacgatgggc aagacccaac tcgtctggag cggccggacc gccggggaca gcatccggct
     9481 cgagcgcccc atcgtcgaaa cctggcaggt tgccggggtc cggggcgtca cctggtctgc
     9541 tcagctctcc ctctctcccg catggggtcg ggccctggtc ggctcgctga gggtcgaagg
     9601 gaagggggac ctcgccaagg ccttgaaggc ttct
//
LOCUS       DASYRV010000622        10173 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_814059, whole genome shotgun sequence.
ACCESSION   DASYRV010000622 DASYRV010000000
VERSION     DASYRV010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10173
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_814059"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            162..695
                     /locus_tag="VGQ24_16385"
     CDS             162..695
                     /locus_tag="VGQ24_16385"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEV8456472.1"
                     /translation="MNRLLGALALALCWPLVTGAAQESAPVSDAFRTLAQRSERNLIE
                     AAEQMPSNKYGFKPTPAQMSFGEVIAHLTEGNHFLCSSIAGVAAAKGPKVAATDSKTQ
                     LVAHLKDSFQFCDSTLAKVNDAKLDAQVPFFGNREVSRASAMFITADDWADHYSQLAI
                     YMRLNGLLPPTAKRRAE"
     gene            complement(1235..2113)
                     /locus_tag="VGQ24_16390"
     CDS             complement(1235..2113)
                     /locus_tag="VGQ24_16390"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HEV8456473.1"
                     /translation="MTAPHMTTPSPALDRKPRDDEIDVYGLTHPGRVRSENQDHFLLG
                     TLSQQMVVRLTSLPDAERLMASPERLATLAMVADGVGGGAKGAEASRIALEAVAKYIS
                     KCLRCYYAAADDRELSEALEEGALLCHLEFVRYGEKNPEYRGMATTLTLFLGVWPRGY
                     LLQVGDSRCYLLRRGELTQITRDQTMAQELVDLGVLTRADASSSPFAHTLSSSIGGSQ
                     SAPVVTRFDLAWGNVLLLCSDGLTKHVSDQRLRERLRSMTSAKQVCEDLLQDALEGGG
                     SDNITIIVGRALPSES"
     gene            complement(2372..4456)
                     /locus_tag="VGQ24_16395"
     CDS             complement(2372..4456)
                     /locus_tag="VGQ24_16395"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEV8456474.1"
                     /translation="MSAVLARRTLLSHPLGACLPLVLAALANQTAQAQTVAPASTRAA
                     NVAPSSSRAAPLWTLKMKQDFRWQQVTPSGTLLVSTDAALTGVDIDRGQVAWEKPELG
                     GLPPDSVRMVDGSLLMEAARPGLLMIFDPATGASVFDSRRLSLAEVVTRRVLPQTGTL
                     LVHGRRTSGPAVVALFDLATGDQRWVNETLFDQTEPKKKGLGGLVQGLVRRASEGTAL
                     QVLQAGPEVIVVHTLMGLRALDARTGETRWSAALPTARAGSPAKHVQLYPSLDKNDRI
                     YVSFDDRLMAYRLADGQPLWAKPATVSGWIRDIVQHPAGIVILPEGAPEGELTGSRTV
                     KNGVVQTGLNVARYEDGTTVAQKAVKMRGDVIEGMIAGDAVVLAVDADSKTYVNVLDV
                     ATATVRLKKDVKIKGRLDYAELTPAGLLYVSRPDATTNAEVNVIDLASGEPRLKDAIE
                     SGKPLSSSGYDAERYYLHHAVEGRTLYVFANRDHQLYAVDRDAGTYKALGGEIKLQGG
                     EDPIAMEIRPDGIVLVAPQNLVVIARDGQVKQQVYHPAPQASGLLRALYAVNAVRAGL
                     RGAAASAYGDAFAQASRRATDPAAQRITSELATAFTQGGAQLQGYARQSAAMATKRFK
                     ASLAVPGSVFMLTKAPEGKGNVLLQIDKDSGQPRARVDLGKEKEPVYAVDDIAGMLFL
                     RTSPGTLVGYRL"
     gene            4709..5572
                     /locus_tag="VGQ24_16400"
     CDS             4709..5572
                     /locus_tag="VGQ24_16400"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HEV8456475.1"
                     /translation="MTGFGAAEGPVAGRRLRVEIRTVNHRYFNLSAKLPGDLSSLEGE
                     LRERLRRDFERGHVSIQARWTESAEGEPGFEVDLDRARIVAARLRELQSTLGLGGEVT
                     IDLVARQPAVLGSGANGAGEIAWTEVEPVVAQAGAECRAMRAREGKALTEELGYRLAL
                     LETAAEQIGARAPDRLIRERDRLRAAVTQLLDGHTVDDARVAQELAFLADKLDITEEL
                     VRFSAHVAAAREALAADGAVGKRLGFLAQELGREVNTMGAKAGDAAIAQTVIAMKGDL
                     EKFREQLENLE"
     gene            5569..6249
                     /gene="gmk"
                     /locus_tag="VGQ24_16405"
     CDS             5569..6249
                     /gene="gmk"
                     /locus_tag="VGQ24_16405"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: protein motif:HMM:NF012832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEV8456476.1"
                     /translation="MMPLLLVLSAPSGGGKTTIAKMLLQARDDLGYSVSATTRAKRPG
                     ERDGVDYHFLTRAEFEKRRKAGEFIESATYGGELYGTLKSEIERIFSQGRHAVLDVEV
                     EGARQIRCNFPNSLLLFVLPPSAAVLLKRLTGRNTEDPAILRQRMIRAAEELAVVSEY
                     DYAIVNEDLVAAVSQVAAILEAEARRVPRQRALPEFVEELQRDVIAAAEKIGKKSPVA
                     SRQSRDRR"
     gene            6315..6527
                     /locus_tag="VGQ24_16410"
     CDS             6315..6527
                     /locus_tag="VGQ24_16410"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEV8456477.1"
                     /translation="MRIITPAEVAKQAGNKYLGVLVAAKFARFLNEFPKDHLARPTEK
                     LTTKAMQELVDGELNYKLLRRRRSEA"
     gene            6524..7771
                     /gene="coaBC"
                     /locus_tag="VGQ24_16415"
     CDS             6524..7771
                     /gene="coaBC"
                     /locus_tag="VGQ24_16415"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEV8456478.1"
                     /translation="MTVWAGRHVVLGVSGGIACYKSCTLARRLTKAGARVDVVLTQSA
                     AEFVRPVTFEALTGRPVQSSLWEPGGALSHVRLGHEADLIIVAPATAHLLARMAQGLA
                     DDVLTALLLARTAPLLLAPAMNDEMFAHPATRTNLERLRSRGVAFVGPETGALAEGPS
                     EQPGRMSEPETIMAHAARLLRAGRLTGRRVVVTAGPTRESIDPVRVVTNRSSGKMGYR
                     VAEVAWERGADVVLISGPVALPEPTGVRMKRVESTKELEDAVRTELPAADVLVMAAAP
                     ADYRPSSPSDSKRSRTEGALAIPMEPTADVLDATREVRKSGSVVVGFALETGDALAKG
                     LAKLERKDLDLIVVNDALEPGAGFEKDTNRVALLSRDGTRKILPLQSKREVAEAILDL
                     VEQALGVGPHDRAAAPAEQTFGR"
     gene            7761..8603
                     /locus_tag="VGQ24_16420"
     CDS             7761..8603
                     /locus_tag="VGQ24_16420"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR00758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEV8456479.1"
                     /translation="MADEWERYLRQQIELGGSEIILSSAGQRGSGAAGQNDSSVSIES
                     TTDSLPSDIAVRPEAAPPPRRSAAPRWQQGAPPVPGPGIAVESPGHVLGDELTTLETI
                     DAVAERIRTTHCCGLCPHRTNAVPGEGDPNARLVLVGEGPGATEDAQGRPFVGQAGTL
                     LSGILEAIEVPRHSVYITNIVKCRPPQNRKPLPDEIAACMPYLHRQLEIIRPQVILAL
                     GSTAAEAMLGVRKSLGELRGKVHTYNGIPLIVTYHPAALLRNPNWKKPTWDDVRIARQ
                     LLDR"
     gene            8566..9951
                     /gene="dnaB"
                     /locus_tag="VGQ24_16425"
     CDS             8566..9951
                     /gene="dnaB"
                     /locus_tag="VGQ24_16425"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEV8456480.1"
                     /translation="MTSVSQDNYSTADPYVGRSAPWSQEAEQAVLGAMLLDQDAALRA
                     AELVDDTMFYREPHRRLFRAMLALTEHRVVIDHITLRDELLRRGELEIAGGLEYLAEL
                     VDAVPTAANIEFHAKIVKDKAILRRLIETSTSIITEAYDGHSTANDLLDNAESKIFQI
                     SQQRGDEGFTRLKEMLWPTMERIETLQRSGKSITGVPSGFTDLDEMTSGFQASELIIV
                     AARPSMGKTAFCLNVATQAAVDGFGVAVFSLEMSKEALVQRMLCAEARVDSQAVRRGS
                     LRDPDFTRLARAAGILQSCPVWIDDSPALTLLEMRSKARRLKVENDVRLIVVDYLQLM
                     RSPEYSENRVQEISDISRSLKALARELEVPVIALSQLSRASEQRGGERRPILSDLRDS
                     GAIEQDADVVIFIHRPEMYQKEDSEGNSLQGLAEVIVGKHRNGPTGTLNLYFHKQFTR
                     FDNRTEREAPE"
     gene            9952..>10173
                     /locus_tag="VGQ24_16430"
     CDS             9952..>10173
                     /locus_tag="VGQ24_16430"
                     /inference="COORDINATES: protein motif:HMM:NF037181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456481.1"
                     /translation="MAKLKSVYRCTECGHEHPKWVGRCEACGEWNAIAEEPAIGRGSG
                     EAGKRGRRSGRAPPAIAPARLRDVATHPLE"
BASE COUNT         1795 a         3274 c         3450 g         1654 t
ORIGIN      
        1 cagattcaac tcgaccgctt caccctctac tgggaccgga gcaacttgac cagcaccaga
       61 ttgacatatg tgccggggtt cacgatcccg gggttgggga gcaattttgg agtgaggtgg
      121 gagtttttga attgacctaa cgcctacttg gaatcaccgc catgaataga ctactgggag
      181 cactggcact ggccctctgt tggccattgg taaccggggc ggcgcaggag tcagcgcccg
      241 tttcggacgc gttccggacg ctcgcgcagc gctctgagcg caatctcatc gaggcagcgg
      301 agcaaatgcc gtccaataag tatggtttca agccgacgcc ggcccagatg agctttgggg
      361 aggtcattgc ccatctgacc gaggggaacc atttcctctg ctcgagtatc gcaggggtgg
      421 cagcggccaa ggggcccaag gttgccgcca ccgactccaa gacgcagctc gtcgcccacc
      481 tcaaggacag cttccaattc tgcgactcga ctcttgccaa agtgaacgac gccaagctgg
      541 atgcccaggt accgttcttc ggtaatcgcg aggtctcccg cgccagtgcg atgttcataa
      601 ctgcggacga ctgggcggac cactacagtc aactcgccat ctacatgcga ctcaatgggc
      661 tgttaccccc gaccgcgaaa cgccgggccg agtaagggaa gtgctacgga gtgtgcggag
      721 ggtcacggct gtcagacgag ccgacggaac gacaccttcg ctcccagcag aatacgcggc
      781 gcagcactgg ccggccttgg gatgctggcg tggcagtggt ggcgcaagcg gcaggcgcat
      841 ggacctgcaa ctaccaactc cgaaagccgt ttctcggaca cgacaacgcc gtcgggtggc
      901 gcgtactagg taaatatcgc tcgagtggat tggttgaaac aagatgaggt ggtggtgcta
      961 agtcattgcg ccgccatttc ttttgtaatg cagcgaagaa tctactttaa gagagcctgg
     1021 aacgcggggt cgcggcgaag tggatcgaag atcggatcca gccgtaacct ccacaccgtc
     1081 gtgtacgagg ggatctcgag tagctgccgc aattctgtaa cggcggcggc atgatttccc
     1141 atgccgcccg cgccgagctc ccgctcgaga cggtagcggt cagagagtgc ggcctgaagc
     1201 ggacggggat atcggtcact taccaggctc gatctcagct ctcactcggc agagcccgcc
     1261 cgacgatgat agtgatattg tcgctcccgc ctccctccag ggcatcctgg agcagatcct
     1321 cgcagacttg cttggcggaa gtcatcgagc ggagccgctc gcggagccgc tgatcggaga
     1381 catgcttggt gagtccatcg ctgcacagga gcagaacatt gccccaagcc agatcgaatc
     1441 gggtcacgac gggggcgctc tggcttccac cgatcgagct cgagagcgtg tgcgcgaacg
     1501 gactgctgga ggcatcggcc cgagtcagca caccaaggtc gaccagctcc tgggccatgg
     1561 tctgatcccg ggtgatctgg gtcagctcgc cgcgccggag caggtagcag cggctgtctc
     1621 ccacttgcag cagatagccc cggggccaca cgccgagaaa gagggtgagc gtggtggcca
     1681 taccccggta ctcggggttc ttctccccgt atcgcacgaa ttccagatgg cacaggagtg
     1741 cgccctcctc gagcgcctcg gagagctctc ggtcgtccgc agcggcatag tagcagcgca
     1801 ggcacttgga gatgtacttg gctacggcct cgagtgcgat ccggctcgcc tcggcgcctt
     1861 tggcaccacc gcccacaccg tcagctacca ttgcgagagt ggcgagccgc tcgggcgacg
     1921 ccataaggcg ctcggcgtca gggagactgg tcaggcgaac gaccatctgc tggctaagcg
     1981 tgccgagaag aaagtgatcc tggttctcgc tgcggaccct tccggggtgg gtgagtccgt
     2041 agacgtcgat ctcatcgtcc cgcggtttcc gatcgagtgc ggggctcgga gtagtcatgt
     2101 ggggagcggt cacggggcct cctggtccgc cagatgcatt ccctgaatct gtcgtgcagt
     2161 cagcagacgt gccagctctc ctcatcccga gcgcagcgag ggacctagac tgcgggctcc
     2221 ccgtaacgcc gggcaaggtc cctcgtcggc tgcgcctcct cgggatgagg atgaaaaaga
     2281 aaatgggcca ccctgtggcc acccatgagg gtggcccttg ggtggccctc attccgtaaa
     2341 aatcaccgga tcaacgcaag gtggcggtgg tttatagccg gtaacccacc agcgtgccgg
     2401 gcgaggtcct gaggaacagc atccccgcga tgtcgtccac cgcgtacacc ggctccttct
     2461 ccttgcccag atccacccgg gcccgcggct gcccgctgtc cttgtcgatc tggagcagga
     2521 cgttgccctt gccctccggc gccttggtga gcatgaagac cgagcctgga accgcgagcg
     2581 acgccttgaa gcgcttggtc gccatcgccg ccgactggcg cgcgtagccc tggagctgcg
     2641 ccccgccctg ggtgaaggcg gtcgccagct cgctggtgat ccgctgcgcc gcgggatccg
     2701 tcgcccggcg tgacgcctgc gcgaacgcgt cgccataggc agaggcagcg gcgccacgca
     2761 gaccggcgcg gaccgcgttt accgcgtaca gcgcccgaag caagcccgac gcctggggtg
     2821 cgggatggta gacctgctgc ttcacctgcc cgtcccgagc gatcacgacc aggttttggg
     2881 gtgcgacaag cacgatgccg tcgggccgga tctccatggc gatgggatcc tcgccgccct
     2941 gaagcttgat ctcgccgccg agcgccttgt aggtgccggc gtcgcgatcg accgcgtaca
     3001 gctggtgatc ccggttggcg aagacataga gcgtgcgacc ctcaaccgca tgatgcaggt
     3061 agtaccgctc ggcatcatat ccgctcgagc tcaggggttt gccgctctcg atcgcatcct
     3121 tgagccgcgg ctcgccgctg gcgagatcga tgacgttcac ttcggcattc gtggtcgcgt
     3181 cgggccgcga gacatagagc aggccggccg gcgtgagctc ggcatagtcg agccggccct
     3241 tgatcttcac gtccttcttg aggcgcacgg tcgcggtggc cacgtcgagc acgttgacgt
     3301 aggtcttcga gtcggcgtcg accgcgagca ccacggcgtc acccgcgatc atcccttcga
     3361 tcacgtcgcc gcgcatcttg accgctttct gggctacggt agtgccgtcc tcatagcggg
     3421 cgacgttgag gcccgtctgg accacgccgt tcttcacggt ccggctgccg gtgagctcac
     3481 cttcgggcgc tccttcggga aggatgacga tcccggccgg atgctgcacg atgtcgcgaa
     3541 tccatccgct gacggtcgcg ggcttggccc agagcggctg gccatcggcg aggcggtagg
     3601 ccatgagccg gtcgtcgaag ctgacgtaga tgcggtcgtt cttgtcgagc gagggataga
     3661 gctgcacatg ctttgccggg gagccggctc tggcggtcgg cagcgccgcc gaccaccgcg
     3721 tctcaccggt gcgggcatcg agcgccctga gccccatcag agtgtgcacc acgatcactt
     3781 cgggccccgc ctgcagtacc tggagggcgg tgccctcgga ggcgcggcgg acgagcccct
     3841 gcaccaggcc gcctagcccc ttcttcttgg gctcggtctg gtcgaacaaa gtttcgttca
     3901 cccagcgctg atcgccggtc gccagatcaa agagcgctac gacggctggc ccggaggtgc
     3961 gccggccatg cacgagcagc gtgccggtct gtggcagaac gcgacgggtg acgacttccg
     4021 ctaggctcag acggcgagaa tcgaacacgc tcgccccggt ggccgggtcg aagatcatca
     4081 gcaatccggg tcgagccgcc tccatgagga gcgacccgtc caccatgcga acgctgtcgg
     4141 gcggcagccc gcccagctcc ggcttctccc acgcaacctg gccccgatcg atgtcgacgc
     4201 ccgttagggc ggcgtcggtc gagacgagca gggtgcccga cggcgtgacc tgctgccagc
     4261 ggaagtcctg cttcatcttg agggtccaga gcggggccgc ccgggacgag gacggggcga
     4321 cattggctgc gcgggttgag gctggggcaa cggtctgcgc ctgggcggtc tggttagcca
     4381 gggcggccag cacgagcggc aggcatgccc cgagcggatg cgagaggagc gtacgacggg
     4441 cgagtacagc ggacatggtc ttccccctta tggcgagcgg acatcggacc tcgccgcgga
     4501 aagcagatgc tgtgccattt cgtttctatc cggccggccc atgagggccg gcctctacga
     4561 cgtcaccggt cctccggacc ggcttgcagg gccgcggtcc ggaggaccgc cagcgcgtcc
     4621 ccgcggaacc cgtccctacc aaagacccca tttcgcggct aaattccgcg gctattccgg
     4681 ctccttcgga ggttgcttgc cgtatagcat gacgggcttc ggtgccgcgg aagggccggt
     4741 ggccggccgg cgactccgag tcgagatccg gaccgtcaac catcgctatt tcaacctgtc
     4801 ggccaagctc cccggcgacc tcagctcgct cgagggggag ctacgcgagc ggctccgccg
     4861 cgacttcgaa cgaggccacg tctcgattca ggcccggtgg acggagagcg ccgaaggtga
     4921 acccggcttc gaggtcgatc tcgaccgggc ccggatcgtc gcggcccggc tccgtgagct
     4981 gcagagcacc ctcggtctgg gcggtgaagt caccatcgat ctggtggccc ggcagcctgc
     5041 cgtgctcggc tccggggcaa atggtgcggg cgagatcgcg tggaccgagg tagagccggt
     5101 ggtggctcag gcgggggcgg agtgccgggc catgcgggcg cgggagggaa aggcgctgac
     5161 ggaggagctg gggtaccggc tcgcgctgct cgagacagcc gcagagcaga tcggggcccg
     5221 ggcgcccgac cggctgatcc gcgagcggga tcgtctcagg gccgcggtga cgcaactgct
     5281 cgacggccac acggtagacg atgccagggt ggcgcaggag ctcgcgttcc tcgccgacaa
     5341 gctcgacatc accgaggagc tggtgcgctt cagcgcccat gtcgccgccg cgcgtgaggc
     5401 gctggccgcc gacggcgcgg tgggaaagcg cctcggcttc ctggcgcagg agctcgggcg
     5461 cgaggtgaac accatgggcg ccaaggccgg cgacgccgcc atcgcgcaga cggtcatcgc
     5521 gatgaagggc gatctggaga agttccggga acagctcgag aacctcgaat gatgccgctt
     5581 ctccttgtgc tctccgcgcc gtcgggtggc gggaagacga cgatcgcgaa gatgctcttg
     5641 caggcccggg acgacctggg ctactccgtc tcggccacga cgcgggcgaa gcggccgggt
     5701 gaacgggacg gggtggatta ccacttcctc acccgcgccg agttcgagaa gcggcggaag
     5761 gcgggcgagt tcatcgagtc ggccacctac ggcggcgagc tgtacggcac gctgaagagc
     5821 gagatcgagc gcattttttc gcaaggtcgg catgcggtgc tcgacgtaga ggtcgaggga
     5881 gcccggcaga tccggtgcaa cttcccgaac tccctgctcc tgttcgtgct gccgccgtcg
     5941 gctgccgtcc tgctgaagcg gctcaccggc cgcaacaccg aggacccggc cattctgcgg
     6001 caacggatga tccgggccgc cgaggagctg gccgtagtgt cggagtacga ctacgcgatc
     6061 gtgaacgagg acctggttgc ggcggtgtcg caggtcgcgg cgattctgga ggccgaggcc
     6121 cggcgggttc cccggcagcg ggcgctgccc gagtttgtcg aggagctgca aagggacgtc
     6181 atcgcggctg cggagaagat tgggaagaag tcgccagtcg ccagtcgcca gtctcgcgat
     6241 cgtcgctgac cggtacacgg ttcggctgac tggcctgcac tgacgactga cgactaaatc
     6301 atgaggagcc aagaatgcgc ataattacac ccgctgaagt ggcaaagcag gccggcaaca
     6361 aatacctcgg cgtgctcgtc gcggccaagt tcgctcgctt cctgaacgag ttccccaagg
     6421 accaccttgc ccggccgacc gagaagctca ccacgaaggc gatgcaggag ctcgtggacg
     6481 gcgaactgaa ttacaagctc ctccgccgcc gccgctccga ggcgtgaccg tgtgggccgg
     6541 ccggcacgtc gttctcggcg tgtccggcgg gatcgcgtgc tataagagct gcactctcgc
     6601 ccgccgcctg accaaagcgg gagcgcgggt ggacgtggtg ctgacacaat cggcggcgga
     6661 gttcgtccgg ccggtgacgt tcgaggcgct gacggggcgc cccgtccaga gctccctctg
     6721 ggagccgggc ggggcgcttt cgcatgtccg gctgggccat gaagccgatc tcatcatcgt
     6781 cgcccccgcc accgcgcatc tgctggcccg catggcgcag gggctggccg acgacgttct
     6841 caccgcactg ctgctcgctc gaactgcacc gctcctcctc gcgccagcca tgaacgacga
     6901 gatgttcgcc catcccgcga cccggaccaa cctcgagagg ctgcgctcga ggggcgtcgc
     6961 gttcgtcggc ccggagaccg gcgccctggc cgagggacca tcggaacagc ccgggcgcat
     7021 gagcgagccc gagacgatca tggcccacgc ggcgcggttg ctccgggccg ggcggctcac
     7081 cggtcgcagg gtggtggtga cggcgggccc gactcgcgag tcgatcgatc cggtgcgggt
     7141 ggtgaccaat cgctcgagcg gcaagatggg atatcgggtg gcggaggtcg cctgggagcg
     7201 gggggccgac gtcgtgctca tctcgggacc ggtagcgctc ccggagccga ccggcgtccg
     7261 catgaagcgg gtcgagtcca ccaaggagct ggaagacgcg gtgcggacgg agctgccggc
     7321 cgcggacgtg ctggtgatgg cggcggcgcc ggccgactac cgcccgagca gcccgagcga
     7381 cagcaagcga tcccgcaccg aaggcgcgct cgcgatcccg atggagccca ccgccgatgt
     7441 gctcgacgcc acgcgcgagg tccgcaagtc cggcagcgtc gtcgtggggt ttgcgctgga
     7501 gaccggagac gcgctggcca agggactcgc caagctggag cgtaaggacc tcgatctcat
     7561 cgtggtgaac gatgcgctgg agccaggcgc gggattcgaa aaggatacca atcgcgtcgc
     7621 cctgctgagc cgcgacggca cccgcaagat ccttccgctc caatcgaagc gcgaagtggc
     7681 ggaggcgatc ctcgacctgg tggagcaggc ccttggcgta ggcccgcacg accgtgcggc
     7741 cgcaccggcg gagcaaacct ttggccgatg aatgggagag gtatctgcgg cagcagatcg
     7801 agctcggtgg atcggagata atcctgagtt cagcggggca gcggggcagc ggggcagcgg
     7861 ggcagaacga ctcatcagtg tcgatcgagt caaccaccga ctcactaccc agcgacatcg
     7921 ctgtccggcc ggaagctgcc ccgccgcccc gccgctccgc cgccccgcgc tggcaacagg
     7981 gtgctccacc cgtccctggc cccggaatcg ccgtcgaatc tccgggtcat gttctaggtg
     8041 atgagctcac tacattggag acgatcgacg cggtcgccga gcggattcgt accacccact
     8101 gctgcgggct gtgtccccat cgcaccaatg cggtgccggg ggagggggat cccaacgcaa
     8161 gactcgttct ggtgggcgag ggaccaggcg caaccgaaga tgcgcaaggg cggccgttcg
     8221 tcggtcaagc aggaacgtta ctcagcggga tcctcgaggc tattgaagtt ccccgtcatt
     8281 cggtgtacat caccaacatc gtaaaatgcc gacctcccca aaatcggaag cctctgccgg
     8341 atgagatcgc cgcttgcatg ccatatctcc atcgccaact ggaaatcatt cgaccgcaag
     8401 tgattcttgc cctgggcagc acggccgcgg aggccatgtt gggggtcaga aagagtctgg
     8461 gagagctgcg cggcaaggta cacacgtaca acggcattcc gctgatcgtg acgtatcatc
     8521 ccgcggcgct actccgcaac ccgaactgga agaagccaac ctgggatgac gtccgtatcg
     8581 caagacaact actcgaccgc tgatccctac gtcggccggt ccgcgccgtg gagccaggag
     8641 gccgaacagg ccgtgctcgg cgccatgctg ctggatcagg acgccgcgct gcgcgcggcc
     8701 gagctggtgg acgacacgat gttctaccgg gagccgcacc ggcggctttt ccgggccatg
     8761 ctcgccctca ccgagcatcg ggtggtcatc gaccacatca ccctgcggga cgagctgctc
     8821 cgcaggggcg agctggagat cgcaggcgga ctcgaatacc tcgccgagct ggtggacgcc
     8881 gtccccacgg cggccaacat cgagttccac gccaagatcg tcaaagacaa ggccatcctc
     8941 cgccgcctga tcgagacctc cacctcgatc atcaccgaag cgtacgacgg ccactccacg
     9001 gccaacgatc tcctcgacaa cgccgaatcc aagatcttcc agatctcgca gcagcggggt
     9061 gatgaggggt tcacccggct caaggagatg ctgtggccga cgatggagcg catcgaaacg
     9121 ctccagcgta gcggcaaatc gattaccgga gtgccgagcg gcttcacaga tttggacgag
     9181 atgacctcgg gctttcaggc cagcgagctg atcattgtgg cggcccggcc gtccatgggg
     9241 aagacggcgt tctgcctcaa tgtcgccacc caggcggcgg tagacggctt cggcgtcgcc
     9301 gtgttctcgc tggaaatgtc caaggaggcg ctggtgcagc gcatgctttg cgccgaggca
     9361 cgggtggaca gccaggcggt ccggagggga tcgctcaggg atcccgattt cacccggctg
     9421 gcacgcgccg cgggcattct ccagagctgc ccggtctgga tcgacgactc gcccgcgctg
     9481 actctgctcg agatgcgctc caaggcgcgc cggctgaagg ttgagaatga tgtgcgcctg
     9541 atcgtggtag actatctcca gctgatgcgg agcccggaat actcggagaa ccgggtgcag
     9601 gagatctccg acatctcccg ctcgctcaag gcgctcgccc gcgagctgga ggtgcccgtc
     9661 atcgccctgt cccagctctc ccgggcgtcg gagcagcggg gcggcgagcg ccggcctatc
     9721 ctgtcggacc tgcgcgactc gggcgccatc gagcaggacg ccgacgtggt gatcttcatc
     9781 caccggcccg agatgtacca gaaggaagac agcgagggga acagtctcca gggattggcg
     9841 gaggtcatcg tcggcaagca ccgcaacggt cccaccggca cgttgaatct gtacttccac
     9901 aagcagttca cccgcttcga caaccgcacc gagcgcgagg cgccggaata aatggccaaa
     9961 ctgaagtcgg tctaccgctg caccgagtgc gggcacgagc accccaaatg ggtgggccgc
    10021 tgtgaggcgt gcggggagtg gaacgcaatt gcggaagaac cggcgattgg gcggggaagt
    10081 ggggaagcgg ggaagcgggg caggagaagt ggacgtgccc cgcccgcgat tgccccagcc
    10141 cgactacgtg atgtcgcaac ccatcccctt gag
//
LOCUS       DASYRV010000623         1579 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3064365, whole genome shotgun sequence.
ACCESSION   DASYRV010000623 DASYRV010000000
VERSION     DASYRV010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3064365"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..249
                     /locus_tag="VGQ24_16435"
     CDS             <1..249
                     /locus_tag="VGQ24_16435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456482.1"
                     /translation="VFTVTANRTGVESRRGGRVRFTGRSQIVDPDGNVMVRATERGTM
                     ARAVDCDLVEARNKSLTRRTHLFRLRRPAYYRRLAGRL"
     gene            complement(277..573)
                     /locus_tag="VGQ24_16440"
     CDS             complement(277..573)
                     /locus_tag="VGQ24_16440"
                     /inference="COORDINATES: protein motif:HMM:NF013633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HEV8456483.1"
                     /translation="MPPRDENAGGAAAESMRFDLLLFELRLFKSRSQASQAIQQGAAL
                     LNRERAKPSRPVRTGDLLTVVTGERRRTYQVIELPHASLSKQEARTLVREVEGG"
     gene            complement(580..>1579)
                     /locus_tag="VGQ24_16445"
     CDS             complement(580..>1579)
                     /locus_tag="VGQ24_16445"
                     /inference="COORDINATES: protein motif:HMM:NF015558.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="putative sulfate exporter family transporter"
                     /protein_id="HEV8456484.1"
                     /translation="RAELFALAPGVLLCALLAASAVWLAEVSWVKSHLHVSALLLVIL
                     LGMALNSFLPIPEAALPGVRLAQRPVLRWAVAGLGFRLSLPELWRIGAPALAVVTVST
                     LAALLVGWWLARRMGVGEKLGLLLGVGGAICGASAVVAADSVVQGERRDSALALGVIT
                     LLGTIGIVLYPMLHHALGMTDFVYGVWDGASLHEMAQVVAAGFGVSDEAARVATVVKL
                     ARICLLAPVVLYLGWSLRHRHRAAGHAKVSPVPWFLVLFVLFALVNSTGALAPAALEC
                     IRRADLWLLCAAMAGVGLQTGFRDLSSAGLRPIMAGALQWGFLATVSYGLARWLCG"
BASE COUNT          296 a          546 c          530 g          207 t
ORIGIN      
        1 gtgttcaccg tgaccgcgaa ccggaccggc gtcgagtcgc ggcgcggcgg acgcgtgcgg
       61 ttcacgggac gcagccagat cgtcgaccct gacggtaacg tgatggtgcg ggcgactgag
      121 cgcgggacca tggcgcgagc cgtggattgc gacctggtag aggctcgcaa caagtcactc
      181 acgcgtcgca cccatctctt ccggctgcgc cggccggctt attaccgccg cttggccggg
      241 aggctctgag gccgagagtc tgaggcaccg agccgttcag cctccctcca cctcgcgtac
      301 cagcgtgcgc gcctcttgct tgctcaggga ggcgtggggc agctcgatca cctgatacgt
      361 gcgacggcgt tctccggtca ccaccgtcaa gagatcaccg gtgcgcaccg gccggctcgg
      421 tttcgcgcgc tcacggttga ggagtgcggc gccctgctgg atggcctggc ttgcctgcga
      481 gcggctcttg aacaagcgaa gctcgaagag gagcaaatcg aatcgcatcg attcggcagc
      541 ggccccgcca gcattttcat ctcggggtgg cacggctcct taaccacaca accagcgggc
      601 gagcccatac gagacggtgg cgaggaatcc ccactgaagc gctcccgcca tgatcggcct
      661 taggcccgcc gagctcaggt cacggaatcc ggtctggagc ccgactcccg ccatggccgc
      721 gcacaggagc cagaggtcgg cgcggcggat gcattcgagc gccgcgggcg ctagggcccc
      781 ggtcgagttg acgagcgcga agaggacgaa caagaccagg aaccacggca ccggagagac
      841 cttggcgtgg cccgctgcgc ggtgtcgatg cctgagtgac cagccgagat agagcaccac
      901 cggggcgagc agacagatgc gggcgagctt gaccaccgtg gccacccgtg ccgcttcgtc
      961 gctgaccccg aagcccgcgg cgacgacttg ggccatctcg tggaggctcg ctccgtccca
     1021 cacgccgtag acgaaatcgg tcatcccgag cgcgtggtgg agcatggggt agagcacgat
     1081 cccgatcgtc ccgagcagcg tgatcacgcc gagtgccaag gcagaatcgc ggcgctcgcc
     1141 ctggacaaca ctatcggccg cgaccaccgc cgaggcaccg cagatcgccc cacccacgcc
     1201 gagcaggagc ccgagcttct cgccgacgcc catgcggcgc gcaagccacc agccgacgag
     1261 aagtgcagcg agcgtcgaca ccgtcaccac cgccagcgcc ggggccccga tcctccacag
     1321 ctcggggagg cttaatcgga accccagccc cgctacggcc cagcgcagca ccggacgctg
     1381 cgccagccgc acacccggga gcgcggcttc gggaataggg agaaatgaat tgagcgccat
     1441 cccgagcagg atgaccaaga gcagggcact cacatggagg tggctcttga cccatgaaac
     1501 ctcggcgagc cacaccgcgg aggctgccag caacgcgcag agcaggacgc cgggtgcgag
     1561 cgcaaagagc tcggcccgg
//
LOCUS       DASYRV010000624         3418 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3314152, whole genome shotgun sequence.
ACCESSION   DASYRV010000624 DASYRV010000000
VERSION     DASYRV010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3418
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3314152"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..238)
                     /locus_tag="VGQ24_16450"
     CDS             complement(<1..238)
                     /locus_tag="VGQ24_16450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456485.1"
                     /translation="MDVNSGAAGPRKHLLYLAVCDPDLEVTGATVRMGAFVKQLGRFY
                     DVTLVHMAGSGYRVDAEVEERFRDRTNRLGVIRRV"
     gene            1066..2577
                     /locus_tag="VGQ24_16455"
     CDS             1066..2577
                     /locus_tag="VGQ24_16455"
                     /inference="COORDINATES: protein motif:HMM:NF015013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEV8456486.1"
                     /translation="MESARLGTSAMLMMASKAISHGCYLLVAVVLARSLEVAEFGTFN
                     QVWLVNKSLVFLFALGLPVSVYYFLARLPDEKKKSFILQTIASLAVLALPFAISMYAL
                     ADLLARYFHNPALAPSLRLFAIYPLLTLPTISTDAILIGLGRTKQAALFDIVTTTAML
                     TAVAAAATLGHRLDLVFKALLAYGVVQSLVAAWLVWRPVRRMPSRFSAADLKAQVAYA
                     APYGLAALVGALNYQVDKVLVALFYPLGVFALYAVAAFEIPLAGVTSVPVVSVIMGEL
                     TRKFTSGDIEGFLRLWHQSMLKLALPVFAVAGFLFVVAGPVVVGMYSSKYADSVGLFR
                     IYLLFLALRITVLEQVLAALGDTRFVFKAQALALLTNVALGYLLMRAVGWFGPAISAL
                     LAGYLFGAMVMVRIRRRLNVGFGRLVPWLALGRVALVAILAAGGAAAVTLLGSNPVWK
                     VGAGFLVFATIYLLGNLWTGAITAGDLRTVWSSVQMARRWPTSGERPRPAAHE"
     gene            2584..2721
                     /locus_tag="VGQ24_16460"
     CDS             2584..2721
                     /locus_tag="VGQ24_16460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456487.1"
                     /translation="MGSVLAAVPRLLQEESLFAGFMIASAAETAAGEVAALHVVIGKG
                     G"
     gene            2726..>3418
                     /locus_tag="VGQ24_16465"
     CDS             2726..>3418
                     /locus_tag="VGQ24_16465"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEV8456488.1"
                     /translation="MALANGYWELLRYKLRSIGLGNTVRLVYLDLSDQVFIQLSKRFP
                     SRAYAARSVQIECTTKCNLKCTFCELSHWTEKPTDLTFANFEKMVAGLPKLRRVDMTG
                     IGEALMNREFVKMVEFLKARGIYITLNDNFTLITEKTARRMVELGVDHIFLSLDGATK
                     ETYEQIRVGSNFDKVIANARGLVKMKRELKKRLPEIKMNTVVCETNYQEMPAIVELAH
                     DIGIGMVVFVNVI"
BASE COUNT          555 a         1104 c         1125 g          634 t
ORIGIN      
        1 gtacccgccg gatgacgccc aatcgattgg tccggtcgcg aaaccgctcc tcgacctcgg
       61 cgtcgacccg ataacccgaa cccgccatgt gcaccagggt gacgtcgtag aaccggccga
      121 gctgttttac gaacgccccc atgcgcacgg tcgcgcccgt cacctccagg tcgggatcgc
      181 aaacggccag gtaaagcaga tgctttcgcg gaccggccgc gccggaattc acgtccacca
      241 gtcctgcctc ggcatcccgt cttccggttg gtgagcctga cctcctccca cggagcggag
      301 aggctcgacg ggccggggaa ggggagacgg cgggacgatc gccttcacca tcgggtgaac
      361 gatccgagcg gaagaccaag caggaaaccc cgttcaggcc ggaggaagcg agtggctccc
      421 ccgcagcagc ggctcagccc ggcgcggcgt cgaccggttg gcacggattg aaggcatgag
      481 gaccaggatc cgcatcggag ccggagcata atccacacca ccctctcgcg gggtgcccag
      541 aaggcctccg ttcgagtact cgattggatt cccatcctga aatgtgtatc gtggcgtaac
      601 gggtgtccac gagctgggca cctcggtggc atggaacttg ctgcccgccg acaacgggac
      661 tccgccgcca tgggagcggg gcacccgcac gccgccaccg tgactatctc tcaggctccg
      721 ggactcgccc tgcacgaggt cagcttgcct gcgggtcgat ggtgtgctcg gccgcgacgc
      781 cggcgtacca gggccggtca ggacccaccg ggccggggcg ggcacacccg aggatcagac
      841 tccatccctg ctcgccaacc cttcgaaaca gtcccccagt tgcccgacgc ggaccgctcg
      901 ggcgaccggg caagcgcacc ggcgcctgcc tgcggaggac tgagcacccg cggcgggtcg
      961 atcccgccac cgccgggacc ggacccttcg gggcttgggc acggccgtgc tgccgggagc
     1021 gtcatcgggg ccgggcgccg tgacctcgac cagaggaatg accaattgga atccgcacgg
     1081 ctagggacca gcgcgatgct gatgatggcg agcaaggcca tctcgcacgg ctgctacctg
     1141 ctggtcgcgg tggtcctggc acgctcgttg gaggtcgcgg agttcgggac cttcaatcag
     1201 gtctggctgg tcaacaagtc cctggtcttt ctgttcgcgc tgggattgcc ggtcagcgtc
     1261 tattacttcc tcgcccgcct ccccgacgag aaaaagaaaa gcttcatcct ccagaccatc
     1321 gccagcctgg cggtcctggc cctgccgttc gcgatctcga tgtacgccct cgcggacttg
     1381 ctggcgcggt atttccacaa ccccgccctg gcgccctcgc tgcggctgtt cgcgatctat
     1441 ccgctcctca cgctcccgac gatcagcacc gacgcgattc tcatcgggct cggtcgcacc
     1501 aaacaggcgg cgctgttcga catcgtcacc acgacggcga tgctcacggc ggtggcggcg
     1561 gccgcgaccc tggggcatcg cctcgatctg gtgttcaagg ccctcctggc gtacggtgtc
     1621 gttcagtcgc tcgtggcggc gtggctggtg tggcggccgg tgcgccgaat gccctctcgt
     1681 ttctcggccg cggacctgaa ggcccaggtc gcctacgccg ctccctacgg gctggccgcg
     1741 ctggtcgggg cgctgaacta ccaggtggac aaggtcctgg ttgcgctctt ctatcccctg
     1801 ggcgtgttcg cgctctatgc cgtggcggcg ttcgagattc cactcgccgg cgtcacctcg
     1861 gtgccggtcg tctcggtgat catgggggag cttacccgga aattcacctc gggggacatc
     1921 gaagggttcc tgcggttgtg gcatcagtcc atgctgaagc tcgccttgcc ggtgtttgcg
     1981 gtggccgggt ttctcttcgt ggtcgccggg ccggtcgtgg tgggcatgta ttcatcaaaa
     2041 tacgcggaca gcgtcgggct gttccgaatc tacctgctgt tcctggccct gcgcataacc
     2101 gtcctggagc aggtgctggc cgcgctcggc gacacccggt tcgtgttcaa ggcgcaagcg
     2161 ctggccctgc tcacgaatgt cgctctgggg tatcttctga tgcgggcggt cggatggttc
     2221 ggcccggcga tctcggcgtt gttggcggga tacctgttcg gggcgatggt gatggtgagg
     2281 atccggcgtc ggttgaacgt cggattcggt cggctggtcc cgtggctcgc cctcggccga
     2341 gtggccctgg tcgcgatcct ggccgcggga ggcgctgcgg ctgtcaccct gctcggaagc
     2401 aaccccgtct ggaaggtcgg cgccgggttt ctggtgttcg cgacgatcta cctgctcggc
     2461 aacctgtgga ccggcgcgat caccgccggc gacctccgga cggtgtggag ctcggtgcag
     2521 atggcgcggc gctggccgac cagcggcgag cgcccccgac ctgcggctca cgagtaggga
     2581 acgatgggat cggtgcttgc agccgttccg cggctgctcc aggaggagtc gctcttcgcc
     2641 ggcttcatga tcgcgtccgc cgcggagacc gcggccggcg aggttgcggc gctccacgtg
     2701 gtgattggaa aggggggttg agggcgtggc actcgcaaac gggtactggg agctcctccg
     2761 ctacaagttg cgctccatcg gcctgggcaa caccgtccga ctggtgtatc tcgacctgtc
     2821 agatcaggtg ttcattcagc tgtcgaagcg ctttccgtcc agggcgtatg cggcacggtc
     2881 ggttcaaatc gaatgcacga ccaagtgcaa tctgaagtgc accttctgcg agctttccca
     2941 ctggacggag aaacccaccg acctgacctt tgcgaacttc gagaaaatgg tcgccggcct
     3001 gccgaagctg cggcgggtcg acatgaccgg catcggcgaa gcgttgatga atcgcgagtt
     3061 cgtcaagatg gtggagtttc tcaaagcacg gggcatctac atcaccctca acgacaattt
     3121 caccttgatc accgaaaaga cggcgcggcg gatggtggag cttggcgtcg atcatatttt
     3181 tctttcactg gacggcgcca ccaaggagac ctacgagcag attcgcgtcg gctccaattt
     3241 cgacaaagtc atcgccaacg cacgcggcct cgtcaagatg aagcgcgagc tgaagaagcg
     3301 gttgccagaa atcaagatga acaccgtggt gtgcgagacg aactatcagg aaatgcccgc
     3361 catcgtcgag ctggcgcacg acatcggcat cggcatggtc gtgttcgtga atgtcatc
//
LOCUS       DASYRV010000625         3113 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1202803, whole genome shotgun sequence.
ACCESSION   DASYRV010000625 DASYRV010000000
VERSION     DASYRV010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3113
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1202803"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..221)
                     /locus_tag="VGQ24_16470"
     CDS             complement(<1..221)
                     /locus_tag="VGQ24_16470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456489.1"
                     /translation="MPRTSVHTARLELTPLDADAIHALLAGDAKRLKQLTGAAFPQPV
                     APPPYMAESLPVVGTRLRTSPAEAPWWNWL"
     gene            complement(303..1334)
                     /locus_tag="VGQ24_16475"
     CDS             complement(303..1334)
                     /locus_tag="VGQ24_16475"
                     /inference="COORDINATES: protein motif:HMM:NF014386.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HEV8456490.1"
                     /translation="MSELGLADILAGVLALSLNAYVLFGGADFGGGVWDLLASGPRRE
                     RQRAVIAHAIGPIWEANHVWLILAIVLTFTCFAPVYARLGTILHIPLTLMLVGIVLRG
                     SAFSFRTYDTRGDAAQRRWGRVFASASVITPVLLGVSIGAVASGSVRPVNSGGFVAQF
                     VQPWLTPFALSVGLLALALFAFLAAVFLTMETHDRDLCEDFRRRALGAGVTVFFASAL
                     VLLLSHNAAPLVRTGLMASSWALPLHLTTGVSALVVLAALWFRRFRLARVAVGLQVSL
                     IFWGWALAQYPLLVPPDLTIANSAAPESTLRLVLIALGVGGAVLLPSLWYLFRVFKTV
                     PADPGERGI"
     gene            complement(1327..2670)
                     /locus_tag="VGQ24_16480"
     CDS             complement(1327..2670)
                     /locus_tag="VGQ24_16480"
                     /inference="COORDINATES: protein motif:HMM:NF013791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HEV8456491.1"
                     /translation="MSDLLAARSQMAVSLAFHIIFAVVGIGMPVLMVIAERRWQKTGD
                     KIYLDLAKRWSKGTAILFAVGAVSGTVLSFELGLLWPQFMEFAGPIIGMPFSLEGFAF
                     FTEAIFLGIYLYGWDRISPRSHLWAGVAVAVSGAASGIFVVLANAWMNSPAGFDLVGG
                     RPVNVDPIAAMLNPAAFQQTLHMTLAAFTATGFAVAGIHAFFLLFDPENAFHRRALSV
                     ALIVGAPAAVLQPISGDISARQVARQQPVKLAAMEAHFETASGAPLTIGGWPDVKRGE
                     TRFAIKIPYGLSLLAFHNSKAEVKGLNEFPREDWPNIPIVHLAFQIMVALGTYLALVS
                     LWVGWVAFKRRDTVGSRRLLQAIALGAPMGFIAIEAGWTVTEVGRQPWIIHGVLRTAD
                     AVTPMPGLIVPFLLFTLLYCFLGVIVVWLLYRQIIRSPSSTEWTRVYARTVARRV"
     gene            2791..>3113
                     /locus_tag="VGQ24_16485"
     CDS             2791..>3113
                     /locus_tag="VGQ24_16485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456492.1"
                     /translation="MSQRLAEFRPRAARLALAFILVGYSSAHAQSSGGSSKIPITTTS
                     AEAKQQYVKGRTLGENLRAHDSREFLTQAAAKDPGMALAHYSLALNAPTARDFFEHLK
                     RAVALA"
BASE COUNT          633 a         1020 c         1021 g          439 t
ORIGIN      
        1 agccaattcc accagggtgc ttcggccggg cttgtccgga gccgggtccc gacgaccggc
       61 agtgactccg ccatgtaggg cggcggcgct accggctggg ggaacgcggc gccggtgagc
      121 tgcttcaggc gctttgcatc gcccgcgagc agcgcgtgga tggcatccgc gtcgaggggc
      181 gtgagctcga ggcgcgcggt gtgcaccgaa gttcgaggca tgaccgacct ctttcgacgc
      241 agggtgtcat tccgagccct tcgccgcact cgggacaggc tcgtgaagaa tctactccag
      301 cctcagatgc ctcgctcccc aggatcggct ggcacggtct tgaagacccg gaacaggtac
      361 cacagagacg gaaggagcac ggctcctcca accccgaggg ctatcaggac cagccgcaat
      421 gtcgattccg gtgccgcgga gttcgcgatc gtgagatcgg gcggaaccag gagcggatac
      481 tgcgccagcg cccagcccca gaagatcagc gacacctgga gccccactgc cacgcgcgcc
      541 agccggaatc gccggaacca gagcgcagca agcacgacga gggcgctcac tccggtcgta
      601 aggtgcagag gcagcgccca tgatgacgcc atgagcccgg tcctcaccag aggagcggcg
      661 ttgtgggaaa gcagcagcac gagtgccgag gcgaagaaga ccgtcacgcc ggctccgagc
      721 gcccgccgcc ggaaatcctc gcagagatcc cggtcgtggg tctccatcgt gaggaaaacc
      781 gcggccagaa aggcgaacag cgccagcgcc aggagaccca cgctcagggc gaacggcgtg
      841 agccacggct ggacaaactg cgccacgaag ccgcccgagt tcaccggcct cacgctgcca
      901 gatgcaaccg cgccgatcga aacaccaagg aggacggggg tgataacgct cgcgctggcg
      961 aaaacccgtc cccaacgccg ctgagcggcg tccccccgag tgtcgtaggt acggaagctg
     1021 aaggccgatc cccgcagcac gatgcccacc agcatcagcg tcagcggaat gtggaggatg
     1081 gttcccagac gggcgtagac cggggcgaag caggtgaagg tgaggacgat cgccaggatg
     1141 agccagacgt gattcgcctc ccagatcgga ccgatggcgt gggcgatgac ggcgcgttgg
     1201 cgctcacgac gcggcccgga ggccagcagg tcccaaacgc ccccgccgaa atcggcgccg
     1261 ccgaagagca cgtacgcatt cagcgatagc gcgagcaccc cggccagaat atcggcaagg
     1321 ccgagctcag acacggcggg ccaccgtgcg cgcgtagacc cgggtccatt cggtagagct
     1381 ggggctccgg atgatctggc gatagagcag ccatacgacg atgacgccca ggaaacagta
     1441 gagcagggta aagaggagaa acggcacaat gagccctggc atcggcgtta ccgcgtcggc
     1501 cgtgcgcagc accccgtgga tgatccaggg ctgccggcct acctccgtca ctgtccatcc
     1561 ggcttcgatg gcgatgaagc ccatcggggc cccgagcgcg atcgcctgga gcagccgccg
     1621 gctgcccacg gtatctctgc gcttgaacgc cacccatccc acccacagcg agaccagcgc
     1681 caggtatgta ccgagcgcca ccatgatctg aaatgccagg tgcacaatcg gaatgttcgg
     1741 ccagtcttcc cgagggaact cgttcaatcc tttgacttcg gccttggaat tgtggaacgc
     1801 gagcagcgag agtccgtagg gaatcttgat ggcaaagcgg gtctcgcccc tcttcacgtc
     1861 cggccagccg ccaatggtga gcggcgcgcc cgacgcggtc tcgaagtgag cctccatcgc
     1921 ggcgagcttg accggctgct ggcgggcgac ctggcgcgcg ctgatgtcgc cggagatcgg
     1981 ctggagcacg gccgcgggtg cacccacgat cagcgccacg ctcagtgccc ggcggtggaa
     2041 cgcattttcc ggatcgaaga gcaggaaaaa cgcgtggatc ccggccaccg caaagccggt
     2101 ggcggtaaag gcggccagcg tcatgtgcag cgtctgttgg aatgccgcgg ggttcagcat
     2161 cgcagcgatg gggtccacgt tgaccggccg tcctccaacc agatcgaatc cggcaggcga
     2221 gttcatccac gcgttggcta acaccacgaa gatgccggac gccgcgccgc tcaccgcgac
     2281 ggcgaccccg gcccagagat gcgatcgggg cgagatccgg tcccacccgt agagataaat
     2341 ccccaggaag atggcctcgg tgaagaaggc aaacccctcc agtgagaatg gcatgccgat
     2401 gatgggcccg gcgaattcca tgaactgagg ccacaggagt cccagctcga aggagagtac
     2461 ggtccccgac acggcgccga ccgcgaacag gatggcggtt cccttggacc accgcttggc
     2521 caggtccagg tagatcttgt cgccggtctt ctgccaccgc cgctccgcga tgaccatgag
     2581 caccggcatg ccgatgccta cgactgcgaa gatgatgtgg aaggccagcg agaccgccat
     2641 ctgggagcgg gcggcgagga gatcggacat gaagggaagg tattacccgg ctgaatcttt
     2701 tcggaagagc ctgcagtaga gccagagagg gacaccgcgc cgccgctttc atcccgtcag
     2761 aaacgcatcc tcatatctcc ggagggtttc atgtcgcaac gattggccga attccgtccg
     2821 agagccgccc gcctcgcgct cgcgttcatc ctcgtcggtt acagctccgc gcacgcgcag
     2881 agtagtggtg ggagcagcaa gatccccatc accaccacct cggccgaggc caagcagcag
     2941 tacgtgaagg gtcgcacgct cggagagaat ctccgggccc atgattcccg ggagttcctc
     3001 acccaagcgg cggccaagga tcccggcatg gcgctcgccc actacagcct cgccctgaac
     3061 gctcccacgg ccagggattt cttcgagcat ttgaagcggg cggtcgccct ggc
//
LOCUS       DASYRV010000626         1582 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3320456, whole genome shotgun sequence.
ACCESSION   DASYRV010000626 DASYRV010000000
VERSION     DASYRV010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3320456"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..232)
                     /locus_tag="VGQ24_16490"
     CDS             complement(<1..232)
                     /locus_tag="VGQ24_16490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-associated domain-containing
                     protein"
                     /protein_id="HEV8456493.1"
                     /translation="MGAPESKTRVDFPVQGMHCAACVGKVERALRAVPGVEEANANLA
                     TGRATVWARPEAAQLLFLRRAVEGAGYAVPEEI"
     gene            complement(236..517)
                     /locus_tag="VGQ24_16495"
     CDS             complement(236..517)
                     /locus_tag="VGQ24_16495"
                     /inference="COORDINATES: protein motif:HMM:NF014624.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sensitive transcriptional regulator"
                     /protein_id="HEV8456494.1"
                     /translation="MIDDESKAKALGRLRRIEGQVQGIQRMVEEDKYCVDILLQLTAV
                     QGAVEQVQRLILGRHIESCVADAIRSGTARDRQKKVDELLEVFSRFGGR"
     gene            complement(504..1346)
                     /locus_tag="VGQ24_16500"
     CDS             complement(504..1346)
                     /locus_tag="VGQ24_16500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456495.1"
                     /translation="MTRGSRVGVLVGAVAAAIALIAVLPPIAQDPAYHRFADTRRLWG
                     VPNGLDVWSNLAFPFVGLWGLVRVVSAPSGGPTNPFRESRERWPYVVVCAGVALTGLG
                     SAWYHAAPDNARLVWDRLPMTLVFMGMVAGVIAERVNVTAGLLLLPPFLAAGMASIAY
                     WHASEAAGTGDLRPYVLVQFLPALAIPLMLWLFPARYSRGGDIVVVLLIYGAAKLFEV
                     LDGRIFALGGMVSGHTLKHLMAALACGWLIWGIMARRPSRLSSRGAAERPPPPATRRQ
                     DDRR"
BASE COUNT          276 a          557 c          518 g          231 t
ORIGIN      
        1 cgatctcctc gggcaccgcg tagcccgcac cctcgacggc gcgtcgcagg aagagaagtt
       61 gggcggcctc cggccgcgcc cataccgtgg cgcgccccgt ggccaggttg gcattggcct
      121 cctcgactcc cgggaccgct cgcaatgccc gctccacctt gccgacgcag gccgcgcagt
      181 gcatgccctg gacgggaaag tcgactcgcg tcttgctctc gggggccccc atggctcagc
      241 gcccgccgaa acgcgagaag acctcgagga gctcgtccac cttcttctgc cggtcccggg
      301 ccgtgcccga gcgtatggcg tcggcgacac atgactcgat gtggcggccg agaatcagac
      361 gttgcacctg ctcgacggcg ccctgcacgg ccgtgagctg gaggaggatg tccacgcagt
      421 acttgtcctc ttcgaccatc cgctggatgc cctgcacctg tccctcgatc cggcgcaggc
      481 gcccgagagc cttggccttg ctctcatcgt cgatcatctt gcctccttgt cgctggtggc
      541 ggcggccgct cggccgcccc tcggctcgaa agtcttgaag ggcgccgggc catgatgccc
      601 caaatcagcc acccgcacgc cagggccgcc atcaggtgct tgagagtatg tccgctcacc
      661 atgccgccta gcgcgaagat ccggccgtcg aggacttcga aaagcttggc cgctccgtag
      721 atgaggagaa ccacgacgat gtctccgccg cgactgtagc gggccgggaa cagccagagc
      781 atcagcggaa tggccagagc cgggaggaac tggaccagca catatggtct gagatcaccc
      841 gtccccgccg cctcgctcgc gtgccagtag gcgatgctgg ccatgcccgc ggccaggaac
      901 gggggcagga ggagaagccc cgcggtcacg ttgacacgct cggcaatcac acctgccacc
      961 atgcccatga agaccagcgt catgggcagc ctgtcccaaa cgagccgcgc attgtcggga
     1021 gccgcgtgat accaggccga acccaggccc gtgagggcta cgccagcgca caccaccaca
     1081 tagggccagc gctcgcggga ctcgcggaac ggattggttg gcccaccgga gggcgccgac
     1141 accacgcgga ctagccccca gagcccgacg aagggaaagg cgagattgga ccagacgtcg
     1201 agaccattgg ggacgcccca gagcctgcgc gtgtcggcaa agcgatggta ggcgggatcc
     1261 tgggcaatgg gcggcaggac agcgatgagc gcgatcgccg ccgcgaccgc cccgaccagc
     1321 actcccacgc gagatccccg ggtcatttcg ctaagaaccg ggggggagcg accgccgctc
     1381 cgtttgagag ttggctcggc tcgccttcgg ctgcacctca cacagcatcc ccggcccccc
     1441 accggttcga gatcggattt gcatacccta caggggtatg ctaccacgcc cggcgccgcc
     1501 tgggagacct agaggtcggg aaacagggaa ggctggctgg ccgcggttgg acgcttgcgc
     1561 ccggtggcgc gcttgcctcg ag
//
LOCUS       DASYRV010000627         1526 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1203957, whole genome shotgun sequence.
ACCESSION   DASYRV010000627 DASYRV010000000
VERSION     DASYRV010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1526
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1203957"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            26..910
                     /gene="nadC"
                     /locus_tag="VGQ24_16505"
     CDS             26..910
                     /gene="nadC"
                     /locus_tag="VGQ24_16505"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR00078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HEV8456496.1"
                     /translation="MTSRREIERIAAAALAEDGDADITTAVTVSPGTRAEGLIEYRDG
                     GVLAGIAFADAVALACRCTITWQKEEGSTCGAGMQVGLVRGELAAILRVERPMLNLLQ
                     RACGIATTTRAYVDAVGTRCRILHTRKTAPGLRALDVAAVIAGGGHRHRVDLAHEVMI
                     KDNHWQALRGEGLGQAVAEARKRGVTALYVEVESVEQLKLACAAGATRLLIDNQPAKT
                     LDEWARRARALSPGIEIEATGGITLENVRDYAEAGADYISIGALTHSVRAADIALEVR
                     VPEAKSANFLGFSSQSPP"
     gene            complement(869..>1526)
                     /locus_tag="VGQ24_16510"
     CDS             complement(869..>1526)
                     /locus_tag="VGQ24_16510"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEV8456497.1"
                     /translation="IIGTSGILLIYLLLNVAYVYLVPLPEMAKSPLIAATAAEKIPLL
                     GRFAGAAISAVVMLSCFSTLIGSMMTGPRIFFAMADRGLFFRAIARVSPRYQSPSVAI
                     WLATGLGVVYVLLNDFQQLADKFILGIWPFYALAVGAVFVLRRSRPDLPRPYRTWGYP
                     VVPMLFLLASIGMVLNALITEPKDTGITFAIILAGVPAYYGWKALSGGRLTGKAKEIG
                     "
BASE COUNT          325 a          432 c          525 g          244 t
ORIGIN      
        1 ggtggcgctc ggttaggcgc ccggtttgac ctccaggcgc gagatcgagc gtattgccgc
       61 cgccgccctg gccgaggacg gcgacgcgga catcaccacc gcagtcactg tatcccctgg
      121 aaccagagcc gaaggcctaa tcgagtatcg agacggggga gttctggctg ggatcgcctt
      181 cgccgatgcc gtagcgctcg cctgccgctg caccataaca tggcagaaag aagaagggag
      241 cacttgcggg gccggaatgc aggtcggtct ggtgagagga gagcttgcgg ctatcctgcg
      301 agtcgagcgg ccaatgctca acctgctcca acgagcctgc ggaatagcga ccaccacgcg
      361 tgcatacgtc gacgcggtag ggacccgctg ccggattctt cacacccgca agaccgcacc
      421 agggcttcgt gctttggatg tcgccgcggt gatcgccggg ggcgggcatc gtcatcgggt
      481 ggatctggcg cacgaggtca tgatcaagga caaccactgg caggcgttgc gcggtgaggg
      541 tctcgggcag gctgtggccg aggcaaggaa acgaggggtg actgcgctct atgtggaagt
      601 ggaatcggtc gagcagctga agctcgcctg tgcagctggg gcgactcggc tactgatcga
      661 caaccagccg gcgaaaacgc tggacgagtg ggcgcggagg gcccgagcac tctctccagg
      721 aatcgagatc gaggcgacgg gaggaattac tttggagaat gttcgagatt atgcggaggc
      781 tggggctgat tacatctcaa tcggagcgct cactcacagt gtccgggccg ccgatatcgc
      841 gctggaggtc agggtaccgg aagcaaaatc agccaatttc cttggctttt ccagtcaatc
      901 tcccccctga caaggctttc cacccgtagt acgccgggac cccggccaga atgatggcaa
      961 aagtgatccc tgtgtccttg ggctcggtga tcagcgcgtt cagtaccatc ccgatggatg
     1021 ccagcaagaa gagcatgggg accaccggat agccccaggt tcgatacggc cgcggcagat
     1081 cgggacgcga ccggcgaagc acgaacacgg caccgacggc cagcgcataa aatggccaga
     1141 ttcccaggat gaacttgtcc gccagctgtt ggaagtcgtt caggagcacg tacaccacgc
     1201 cgaggccggt ggccagccag atggcgaccg agggactctg gtagcggggt gagacccgag
     1261 cgatggcccg gaagaagagt ccccggtcgg ccatggcgaa gaagatccgg gggccggtca
     1321 tcatcgagcc gatcagagtg ctgaagcagg agagcatgac gaccgcggag atggccgctc
     1381 cggcaaagcg accgagaagg ggaatcttct ccgctgcggt ggcggcgatc agcggtgact
     1441 tggccatctc cggcagaggc acgaggtaga cgtacgccac attgaggagg aggtaaatca
     1501 ggagaatgcc ggacgtaccg atgatg
//
LOCUS       DASYRV010000628         9726 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2866277, whole genome shotgun sequence.
ACCESSION   DASYRV010000628 DASYRV010000000
VERSION     DASYRV010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9726
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2866277"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..203
                     /locus_tag="VGQ24_16515"
     CDS             <1..203
                     /locus_tag="VGQ24_16515"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HEV8456498.1"
                     /translation="LPVYLLTQGTEISLNWSLVLIATAGVVLGTLLGKHVLARMSQAI
                     FRRVIALLLIGLGLYMVRRGLL"
     gene            252..773
                     /locus_tag="VGQ24_16520"
     CDS             252..773
                     /locus_tag="VGQ24_16520"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HEV8456499.1"
                     /translation="MTQALDAIRRIISVLRRSSRLAESEVGIGGAQLFVLQQLATAPA
                     RSINELAERTYTHQSSVSVVIRRLVKQGLVERRPAPDDRRRRELRLTPAGKRLVARAP
                     VPAQIRLINGLRALSVSQLRTFVRLFDQVVHRMGAAGEPPAMLFAEEPASGRAGRPRQ
                     AARKGLHQRRRKP"
     gene            complement(774..1175)
                     /locus_tag="VGQ24_16525"
     CDS             complement(774..1175)
                     /locus_tag="VGQ24_16525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456500.1"
                     /translation="MSIRSLTVPLTGFGCAPTEAQVTVETLSVRARLARGAAVAGAGL
                     ALAVIALPIPLVHFVLVPSALLLGITFGAIRLGQREIFSSAQGACPFCGTHQRLGLAG
                     RVFRLPRRVFCSHCQRELGLGRYVRGSTPAD"
     gene            complement(1253..1906)
                     /locus_tag="VGQ24_16530"
     CDS             complement(1253..1906)
                     /locus_tag="VGQ24_16530"
                     /inference="COORDINATES: protein motif:HMM:NF013209.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HEV8456501.1"
                     /translation="MGRPLPRRLTQGTSGRMLELLRRGPMTVDELAVALEVTRTAVRG
                     QLATLQHDALVELRGIRRGASKPSRTYGVTRQGELLFSQAYIPILTQLLHVLARRLAP
                     EEFDSVMHEVGRGMMADRAPARGPLRERVIRASSLLNELGGLSEAEEEDGLYVIRSHG
                     CPLAAATADHPEACNALESLLSEFVGSRVTKCCDRYDRVRCCFEVSDDSEAPTEVQH"
     gene            2338..3342
                     /locus_tag="VGQ24_16535"
     CDS             2338..3342
                     /locus_tag="VGQ24_16535"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEV8456502.1"
                     /translation="MHEVVQKSVSPKVALSVGLKVDAEAIPADVAQAIKDGKVDLESP
                     ATTVTLLKLNAVVGLKGTVKTVAGKDTLVQLGITCALCHSTADNSFAQGIGRRKDGWP
                     NRDLNVGAIIALSPAVTAAQKVVYNSWGPGKYDPRFNIDGKSTPLILPPAYGLAEVKN
                     ETYTAEGPISYWNAYVAVTQMHGHGNFADPRLGLDIRQSPDMVGPKLAALRSYQHSLP
                     APSAPAGSVDIAAAGRGRALFRRSCSSCHVGGTGTDNNDGKLHQPSETGMDAAYAART
                     ANRAYRTTPLRGLWQHPPYFHDGSAATLNDVVAHYDRVRNLRLTPEQERDLIEYLKTL
                     "
     gene            3493..3717
                     /locus_tag="VGQ24_16540"
     CDS             3493..3717
                     /locus_tag="VGQ24_16540"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HEV8456503.1"
                     /translation="MTALKAAPKGPRFDRTYIEQEVGIHKAVLDLAEKAHDATQNEDL
                     KKLIEQAKPVIQKHLDRAEEIQKKLGKPTA"
     gene            3828..4625
                     /locus_tag="VGQ24_16545"
     CDS             3828..4625
                     /locus_tag="VGQ24_16545"
                     /inference="COORDINATES: protein motif:HMM:NF021505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2231 domain-containing protein"
                     /protein_id="HEV8456504.1"
                     /translation="MRSAAHLRGHPIHPALIPFPFAFLTGAFLFDVAGRATGHSNWWT
                     TGGYLAIAGIFTALLAAVPGLIDYLRTVPPNSSGKRRATKHMLLNLSAVAFFIVATLL
                     RADSVAPVTAVIVLEGLAVAMLLIGGWLGGVLVSRNQISVDHRYARSGKWKDERHRVS
                     GQPIVVARSDELEVDQMKLLRLDGRRIVLSRTKDGYVAFDDRCTHKGGSLAGGVMIGG
                     VVQCPWHGSQFDCRSGAVKAGPAKEAVETYRVREQEGKVMLSLGDRT"
     gene            complement(4634..5284)
                     /locus_tag="VGQ24_16550"
     CDS             complement(4634..5284)
                     /locus_tag="VGQ24_16550"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEV8456505.1"
                     /translation="MPGPASAGLVSYGAMKPTPSSTSNAAELDPATPEVLRVLVDNHA
                     RFLGFLERRVGSGDVAEDILQEAFVRSLDRVDSIRKTDSAIAWFYRVLRNAIADHFRR
                     QNARDRTLAQLSADADEPATSQDEELEAVVCACVMELVDTLKPEYATALRRVDLDGMS
                     VRSYALDTGITAGNAGVRLHRAREALRKQLARCCGTCLTHGCFDCQCKKNGTQMPS"
     gene            5523..6260
                     /locus_tag="VGQ24_16555"
     CDS             5523..6260
                     /locus_tag="VGQ24_16555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456506.1"
                     /translation="MGRAFRKTVGVMGAGAGAVAMLGVGYAGFTWYRYGKVARGGPRN
                     PLVDRFIPKYEVREVHQTRVAAPADVTFGVAQDLDLRRSTIVRAIFTGRELLMGGERS
                     RREHALRFLDEVLDQGWRILAEEPGRQLVIGAVTQPWKADVEFRGLAPEEFAAFREPG
                     YAKIVWTLAVKPMGENASVFTTETRVATTDPESRSRFRRYWSVFSPGILLIRYETLRL
                     VRREAEHLALTEPAAASEISLARQPAP"
     gene            complement(6232..6891)
                     /locus_tag="VGQ24_16560"
     CDS             complement(6232..6891)
                     /locus_tag="VGQ24_16560"
                     /inference="COORDINATES: protein motif:HMM:NF013252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456507.1"
                     /translation="MPTKMLARPLDVRTVSGLPQIDPIALASRADAFDDPEWLFEPKY
                     DGLRGLVYASTLGCEIRSRRDLRLDRFDELCGRVARVLGTREVILDGEIVALDRKGKP
                     VFQDLLRGEGFLAFAAFDLLWLDGDDLRPLPLAERKRRLTDLLPADTGPLYKILILEE
                     HGRALFSAITKMDLEGIVAKRKGDPYGSATTWYKIENPAYSQSERSGDLRLRELAAWP
                     G"
     gene            7016..8473
                     /locus_tag="VGQ24_16565"
     CDS             7016..8473
                     /locus_tag="VGQ24_16565"
                     /inference="COORDINATES: protein motif:HMM:NF013132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008509 - monoatomic anion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006820 - monoatomic anion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HEV8456508.1"
                     /translation="MIAPRRRIGAVLAPAVFLLLLALPMPGLPAPAHRLGAVLAAVVV
                     LWVTEALPLAVTALLGAAACVVLQVASAKEVFAPFADPLMFLFIGAFILARAIFLHGL
                     DRRVAYAVLSLPWVGARPSRILLAFGAVTAFISWWISNTATTAMMFGIGLSILAALRA
                     PGGAASINPRYATALMLMTAFAASVGGLATPVGTPPNVIGIGFIRSLVGVEIPFFRWM
                     LVGVPIFLVLFTFLYLYLDRAAPAGVRELPAGAELIRRERERLGPWTRGQRSVAIAFT
                     VTVSLWILPGIVAIVVGEGSAAYASLNRRVPEGVAALLGAMLLFMLPGEKGPAITWDD
                     AVQIDWGVVLLYGGGFALGVLSFQTGLAEAMGRGLTGLLPIQGSLGLLVASVVVAVIL
                     SETTSNTAAANMVVPVVISVARAAGLDPFEPALGATMAASLGFMLPVSTPCNAIVYGS
                     GLIPLGQMMRHGLALDLVGIVVIVTLVHALAPLVR"
     gene            8653..9300
                     /locus_tag="VGQ24_16570"
     CDS             8653..9300
                     /locus_tag="VGQ24_16570"
                     /inference="COORDINATES: protein motif:HMM:NF024587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidylate kinase-like family protein"
                     /protein_id="HEV8456509.1"
                     /translation="MSIPDRAPVQLITISREYGAGGSELGVLLGKELGWRVLDHELVR
                     QLAARLRCEEGEVVAMDEHVPSFLERLAAVAVVTAPESRDHSSPWATDPDCIAAAARE
                     VLLEAARTLPLIVVGHGGNCLFRGRPGVLRVRVTAPFDVRVRRVAQRTGVASALAAAD
                     VRRKDADRQQYLQRYYHSSLNDPCEYDLQINTGAIPLDAAARLVLALLRPAPARL"
     gene            9345..>9726
                     /locus_tag="VGQ24_16575"
     CDS             9345..>9726
                     /locus_tag="VGQ24_16575"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEV8456510.1"
                     /translation="MPARQAIAAEEAAAFVARYRWIILLGLITAAIMEVLDTTIINVA
                     LPQMAGNLGATQQEISWVSTGYILSNVVVLPMTAFFTERIGRQRYLTASIIIFIVASF
                     FCGTSNSLTELVVWRIIQGAGGAAL"
BASE COUNT         1667 a         3128 c         3125 g         1806 t
ORIGIN      
        1 ggctaccggt ctatctcctg acccagggca cggagatctc gctcaactgg tccctggttc
       61 tgatcgcaac tgccggtgtc gttctgggta ctctgctggg aaaacacgtc ctcgcccgga
      121 tgagccaggc gatctttcga cgagtgatcg ccctgctcct gatcggtctg ggtctatata
      181 tggtgcgacg gggtcttctt tgatgcgact gctactcgga ccgacgggca cctgacgtga
      241 ccgagccgca tatgacccag gcgctggacg cgatccggcg catcatctcg gtgctccgac
      301 gttcatcccg tctggcggag agtgaagtcg gaattggagg cgcgcagctg ttcgtgctcc
      361 agcagctcgc caccgcgccg gctcgctcga tcaatgagct ggccgagcgc acttacaccc
      421 accaaagctc cgtctcggtg gtgattcgcc ggctggtcaa gcagggattg gtcgagcggc
      481 ggccggcccc cgatgaccgg cgccgccgtg agctgagatt aaccccggcg gggaagcgct
      541 tggtggcgcg ggcgccagtt cccgcccaga ttcgcctgat caacggcttg cgggcgctat
      601 cggtttccca gcttcggacg ttcgtccgcc tgttcgatca ggtggtgcac cggatgggcg
      661 ccgccggcga gccgccggcg atgctatttg ccgaggagcc ggcgtcaggc cgagctggac
      721 ggcccaggca ggcggcccgg aaagggctgc accagcgtcg caggaagcca tagtcagtcg
      781 gccggggtgc ttccccgcac gtaccgtccc aaccccagct ctctctggca gtggctacag
      841 aaaactctgc gtggcagtcg gaacaccctt cccgccaggc ccagccgctg atgagtccca
      901 cagaacgggc aggctccttg cgccgaggag aagatctccc gctgccccag ccgaatggcc
      961 ccgaaggtga tgccgagcag cagggctgag ggaaccagga cgaagtggac caggggaatc
     1021 ggcagggcga tgacggcgag ggcgaggccg gcaccagcga cggcggcgcc gcgcgcaagg
     1081 cgggcccgca cgctcagggt ttcgacggtc acctgggctt ccgtcggcgc acagccgaag
     1141 cccgtgagcg ggaccgtgag cgatctgata ctcatccgca ggatcttaac attatatgga
     1201 tacccataca aatagcggcc ggcgccgcac cgcgtgcccg ggcgcgcgag cattagtgct
     1261 ggacctccgt gggcgcttcg gaatcgtctg acacctcaaa gcaacagcgg acccggtcgt
     1321 accggtcgca acacttggtc actctactac cgacgaattc gctcagcagg ctctcgagtg
     1381 cgttgcaggc ctccggatga tcggctgtgg ccgcagcgag tgggcagccg tggcttcgga
     1441 tgacgtacaa tccatcctcc tcctcagcct cggacagccc acccagctcg ttcaagagcg
     1501 aactggcacg gatcacccgc tcccgcagcg gcccacgggc tggcgcacgg tccgccatca
     1561 tgccgcgacc gacttcgtgc ataacggagt cgaactcctc cggtgccagc cgacgtgcca
     1621 acacatggag tagctgagtc aggatcggga tgtaggcctg cgagaacagc agctcgccct
     1681 gcctggtaac tccatacgtc cgcgaaggtt tacttgcacc ccgccgaata cctcggagtt
     1741 ccaccagcgc atcgtgctgg agcgtagcca actgaccccg taccgccgtc cgcgtcacct
     1801 cgagcgcaac agccagctcg tcaacggtca taggtcctcg gcgaagcagt tccagcatgc
     1861 ggccggatgt gccctgggtc aggcggcgag gcaagggtct tcccatgtaa tccctatctc
     1921 ataggggcgg tcgaactgac agatcctaca gattcggcta cctaatcttg cttttattcg
     1981 cttcttttgg tatcactgta gatcagcgtt cctggcccaa acccaagtga cgctgcgcaa
     2041 gcttcatggt accgccgaac cggggagcta gccatgtctc tctcgaacgc gctctcagcc
     2101 cacccgaaat cctattgcct gcttacaaaa cacgtatgcc gagcttctgt cgtggtcagt
     2161 gctcttggcg tcctggccgg ctgtggcgtg ggaggctccc gagagcaacc ggggcgtttg
     2221 cccaccgggg ctggcccctc ccaagatgat cgttcaccgc agacgcttgc ggagggacag
     2281 aggatcttcc ggtacgagac ctttggggat gagcagttct ggactgatac cgcgcggatg
     2341 catgaggtcg tccagaagtc ggtcagtccc aaggtggcct tgtcggtggg gttgaaggtg
     2401 gacgccgagg cgatccctgc tgacgtcgca caagccatca aggatggcaa ggtcgacctg
     2461 gaaagtcctg ccaccaccgt aacgctcctc aagctgaatg ccgtggtcgg actcaagggc
     2521 accgtgaaaa cggtggcagg gaaggacact ctggtccagc taggcatcac gtgtgccctg
     2581 tgccactcca ccgctgacaa ctcgtttgcc caaggcattg ggcgccgcaa ggatggatgg
     2641 ccgaaccgcg atctcaacgt gggtgcgatc atcgcgctgt ctccggctgt cactgccgcg
     2701 cagaaagtag tctacaactc ttgggggccc gggaagtatg acccacgctt caacatcgac
     2761 ggaaagagca ctccactgat acttcctccc gcgtatggcc tcgccgaagt aaagaacgag
     2821 acctacacag ccgaaggacc aatctcatac tggaacgcct atgttgccgt cacccagatg
     2881 catggccacg gcaacttcgc cgacccacgg ctcggtctcg acatccggca gtccccggac
     2941 atggttgggc ccaaactcgc ggctttgcgc agctatcagc acagcctccc tgcaccttct
     3001 gctcctgccg gtagcgtcga catcgccgct gctgggcggg gacgcgcgtt gtttcgcaga
     3061 tcgtgctcga gctgtcacgt ggggggaacc ggcaccgaca acaacgatgg gaagctgcac
     3121 cagccatcgg agactgggat ggacgcagcc tacgccgcgc gtacggctaa cagggcgtac
     3181 cgcacaaccc cgctgcgggg actctggcag cacccgccgt atttccacga tgggagtgcc
     3241 gcgacgctaa atgacgtggt cgcgcactac gaccgggtcc gtaacctgag actgacccca
     3301 gagcaggagc gagatctcat cgaatacctg aagacgcttt aacctgtcct ggagtgaggc
     3361 ccatcacctc aacggttgaa tcgacaccta agttgaggga aatgttcccg accaggaggt
     3421 ttttgtgcag ggtaaatcat cgcggtacat aatggttgtc gcggcatcgc ttgcactggc
     3481 gaccgaggtg agatgaccgc cctcaaggcg gcacccaagg gtccccggtt cgatcgcacc
     3541 tacatcgagc aagaggtggg gatccacaag gcagtgctcg acctggcgga gaaggcgcac
     3601 gacgcgacac aaaacgagga tctgaagaaa ctgatcgagc aggccaaacc cgtgattcag
     3661 aagcacctgg accgggcaga ggagattcag aagaagctcg gcaagcccac cgcctaagct
     3721 gataccgagc gcaggacgag gcagcgcctt gcgctcggta tccttgttcg cgagatcgcg
     3781 gacagatccg atgttgcacg gtactgccgg tcactggagg gcccttcatg cgcagcgccg
     3841 cccatttgcg gggtcatccc attcatcccg cactgatccc gttccccttt gccttcctga
     3901 cgggggcatt cctgttcgat gttgccggtc gagcgactgg gcactcgaac tggtggacga
     3961 caggcgggta cctcgcaatc gctggcattt ttaccgccct gttggcggcc gtgccggggc
     4021 tcatcgatta tctccgaaca gtgccgccga acagctccgg caaacgccga gcgaccaagc
     4081 atatgttgct caacctctcg gcggtggcgt tcttcattgt agcgacgttg cttcgcgcag
     4141 atagcgtcgc gccggtaact gcggtaatcg tgctggaagg gcttgccgtg gcgatgctat
     4201 tgatcggagg atggctcggc ggagtcctcg tgtcgcgcaa ccagatcagc gtggatcacc
     4261 gttatgcccg gtcgggcaaa tggaaggacg aacgccacag agtcagcggc cagccgatcg
     4321 tcgtagcccg gtcggatgag ctggaggtgg accagatgaa gctcctccgc ctggatggac
     4381 gtaggatcgt gctctcgcgt acgaaggacg ggtacgttgc gtttgacgat cgctgtaccc
     4441 acaagggcgg ctcgctggcc ggtggagtga tgattggtgg ggtggtacag tgcccctggc
     4501 acggctctca gttcgactgt cggagcggtg cggtcaaggc tgggccggca aaggaggccg
     4561 tcgagaccta tcgggtccgc gagcaggaag gcaaagtaat gctgagtctc ggcgatcgaa
     4621 cctaggtcag cggttacgac ggcatttgag ttccattctt cttgcactgg caatcgaagc
     4681 atccatgagt aaggcaggtg ccgcagcatc gggcaagctg cttccgtaga gcctcccgcg
     4741 cccggtgcag ccgcaccccg gcatttccgg ccgtgatacc ggtatccaac gcatagctcc
     4801 gcacgctcat cccatccaga tccacccgcc ggagcgcagt ggcgtactcc ggcttgaggg
     4861 tgtccaccag ttccatgacg caagcgcaga ccacagcctc gagctcctcg tcctgggagg
     4921 ttgccggctc atccgcgtcg gcagagagct gggccagagt ccggtcacgc gcgttctgcc
     4981 ggcggaagtg gtcggcgatg gcattgcgca ggacccggta gaaccacgcg atggcggaat
     5041 cagtcttccg gatggagtcg acccggtcaa gacttcggac gaacgcctcc tgcaggatgt
     5101 cctctgccac gtccccggat cccacacgcc gttccaggaa cccgaggaat cgggcatggt
     5161 tatctaccag cactcgcaag acctcgggcg ttgccgggtc gagctcggca gcgttggacg
     5221 ttgatgacgg cgtcggcttc atggcgccat aggatacgag ccccgccgac gccggtccag
     5281 gcatttcggc ggactcgtat gctgggctcg gctttactgg catccgcacc cgcaggggcc
     5341 gtcgccgcag ggacattcgt cgccgcaggc acagccacag gtgcatccca gtcgcaggtc
     5401 ggcagagttg ctcattcgaa gtactccttg ttgttttggt atccagccaa cagcacaatt
     5461 gccttcatac ttgctgacgc gtccggcgac aaagcattac accccggcag ggagaggact
     5521 ccatggggcg agcgtttcgc aagacggtgg gagtgatggg agcgggtgcg ggtgccgtgg
     5581 ccatgctggg cgtgggttat gccggcttta cctggtatcg gtacggcaag gtggctcgcg
     5641 gcgggcctcg taaccccctg gtcgatcgct tcatccccaa gtacgaagtt cgtgaggtcc
     5701 atcagaccag agtcgctgcg ccggcggacg tgaccttcgg cgtggctcag gacctcgatt
     5761 tacggcgatc taccatcgtg cgggccatct ttaccggccg cgagctgctc atgggtggag
     5821 aacgttcgag gcgggagcac gcactccgct ttctggacga ggtcctagac caaggctggc
     5881 gcatcctggc ggaggagccc ggacgccagc tcgtgatcgg cgcggtcacc caaccgtgga
     5941 aagccgacgt cgaattccgc ggcctggcac cagaggagtt tgctgcgttc agggaacccg
     6001 gctatgccaa gatcgtgtgg accttggccg tcaagccaat gggggagaat gcgtcggtct
     6061 tcactaccga gaccagggtt gccacgacgg accccgagtc ccgctcccgc ttccggcggt
     6121 actggtcggt cttctcaccc ggcatcctgc tgatccggta tgagaccctt cgtttggtga
     6181 ggcgagaggc agaacaccta gcactgacag agcctgcggc ggcctcggag atcagcctgg
     6241 ccaggcagcc agctccctga gccgcaagtc tccgctccgt tcactctggc tgtaggccgg
     6301 gttctcgatc ttgtaccacg tcgtcgccga cccgtacgga tcgccctttc gcttcgccac
     6361 gatcccttcc aggtccatct tcgtgatcgc gctgaacagg gcccgcccgt gctcctcgag
     6421 gatgaggatc ttgtagagcg gcccggtatc cgcgggcagc aggtcggtca gacgccgctt
     6481 ccgttctgcc aggggcagcg ggcggagatc gtccccatcg agccagagaa ggtcgaaagc
     6541 cgcgaacgcc agaaagccct cgccgcggag gagatcctga aagaccggct tccccttgcg
     6601 atcgagtgcg acaatctcgc catccagaat gacctcccgg gtgcccagta cccgggcaac
     6661 ccgaccgcag agctcatcaa accggtcgag gcgcaagtca cggcgggatc ggatctcgca
     6721 gcccagcgtg gaggcgtaga ccagaccacg caagccgtcg tacttgggct cgaaaagcca
     6781 ctcgggatcg tcgaaggcgt ccgctcggga agcgagcgcg atcggatcga tctgcgggag
     6841 gccgctgacg gtgcgtacgt cgagcgggcg agcgagcatc ttcgtgggca tgacggctcc
     6901 ggggccgggt ctgcggcctg gagtcctccc cacgaggagg gcggttcaat aagggctccc
     6961 cattctatcc tgcgttcgcg ccgttggtaa gctcgggccg cacccggagc ctttcatgat
     7021 tgcgccgcgc cggcgaatcg gagctgttct cgctcccgct gtcttccttc tactattggc
     7081 acttccgatg ccgggcctcc cggccccggc gcaccgcctg ggggcagtcc tggcagcggt
     7141 ggtggtcttg tgggtgacgg aggcgctgcc cctcgcggtg accgcccttc tcggcgccgc
     7201 ggcctgtgtg gtgctccagg tggcctcggc caaggaggtg ttcgcgccat tcgccgatcc
     7261 gctgatgttc ctcttcatcg gcgccttcat tctggcccgg gcgatcttcc tccacggcct
     7321 cgaccgccgt gtggcctacg ccgtactctc cttgccctgg gtcggcgcga ggcccagccg
     7381 gattctgctc gccttcggcg ccgtgacggc gttcatctcc tggtggatct ccaacaccgc
     7441 gacgaccgcg atgatgttcg ggatcgggct ctcgattctc gccgcccttc gagcgcccgg
     7501 cggcgcagcc agcatcaatc ctcgctacgc cacggcgctg atgctgatga cggcgttcgc
     7561 agcctcggtg ggcggcctgg ccacaccggt cggcacgccc ccgaacgtga tcggcatcgg
     7621 cttcattcgc tccttggtcg gagtggagat tcccttcttc cgctggatgc tggtgggggt
     7681 tccgatcttc ctggttctct tcacgtttct gtatctctat ctcgaccgag cggcccccgc
     7741 cggggtccgc gagctgcccg ctggagccga gctgatccgc cgggagcgtg agcgcctggg
     7801 cccgtggacc cgagggcaac gctcggtggc catcgccttt accgtgaccg tgtcgctctg
     7861 gatcctgccg ggaatcgtcg ccatcgtggt gggggaggga agcgccgcgt acgcgagcct
     7921 gaaccggcgg gtaccggaag gcgtcgcggc gctgttggga gccatgctgc tgttcatgct
     7981 gccgggggag aaggggcctg cgatcacctg ggatgacgct gtgcagatcg actggggcgt
     8041 ggtgttgcta tacggcggcg ggttcgccct gggggtcctc tcgtttcaga ccggccttgc
     8101 cgaggcgatg gggcgtgggc tcaccggact gcttccgatc caagggagtc tcgggctgct
     8161 ggtggcgtcg gtagtcgtgg cggtcatcct gtcggagacc acatccaaca ccgcggcggc
     8221 gaacatggta gtccccgtgg tcatctcggt cgcgcgtgcc gccggcctcg acccattcga
     8281 gcccgcgctc ggcgctacca tggcggcaag cctcggcttc atgctgccgg tgtcgacgcc
     8341 gtgtaacgcg atcgtgtatg gctcgggcct catccccctg ggtcagatga tgcggcatgg
     8401 actggcgctg gacctggtcg ggattgtggt aatcgtcacc ctggtgcacg cgttggcgcc
     8461 gctcgtgcgt tgacgcgagg gcgtttctct ctctcttggc gagcggaact gggtgagccc
     8521 ctccagcttc gagtgtctga cttcccgccg caccacccct tacactcagc cgtcggggct
     8581 cacccagttc cgctgaaaga gttatagggc atcgaccgtg gcgttgcggg gtattggtac
     8641 catatttcgg ccatgagtat tcccgaccgg gctccggttc agctcatcac catatcacgc
     8701 gagtacggtg ccggcggcag cgagctaggg gtgctcctcg gcaaggagct gggctggcgg
     8761 gtgctggatc atgagctggt gcggcagctg gccgcccggc ttcggtgcga ggagggcgag
     8821 gtggtagcca tggacgaaca cgtgccgagc ttcctggagc ggctggctgc cgtggcggtc
     8881 gtgaccgcac ccgagtcgcg cgaccattcg agtccctggg ccaccgatcc cgattgcatc
     8941 gcggcggcgg cgcgcgaggt cctgctcgag gctgcccgaa cccttccgct catcgtggtg
     9001 ggccacggcg ggaactgcct ctttcgcggc cgtcccggcg tcctgagagt gcgggttacc
     9061 gctccgttcg atgtccgggt gcgacgggtg gcccagcgga ccggggtggc aagcgccctg
     9121 gcggccgccg atgtgcggcg caaggacgcc gaccggcagc agtacctcca acgctattat
     9181 cacagcagcc ttaacgatcc gtgtgagtac gacctgcaga tcaacacggg agccattccg
     9241 ctcgatgcgg ctgcccgact ggttctcgct ctcctgcgtc cagcacccgc ccgactctaa
     9301 acccgcgcca ttcgttcatc ggattcatga cggctgcccc atcgatgcca gcccggcagg
     9361 ccatagccgc cgaggaagcg gccgcgttcg tcgcccggta ccggtggatc atcctcctcg
     9421 gcctcatcac cgcggccatc atggaggtgc tggacaccac catcatcaac gtggccctcc
     9481 cgcagatggc gggaaacctg ggggccaccc agcaggagat cagctgggtc agcaccggat
     9541 acatcctgtc caacgtcgtc gtgcttccga tgacggcatt cttcaccgag aggatcggcc
     9601 ggcagcgcta cctcaccgcg tcgatcatca tcttcatcgt cgcgtcgttc ttctgtggca
     9661 cctcgaactc gctcaccgag ctggtggtgt ggcgcatcat tcagggcgcc ggcggggcgg
     9721 ccctcc
//
LOCUS       DASYRV010000629         7263 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3913388, whole genome shotgun sequence.
ACCESSION   DASYRV010000629 DASYRV010000000
VERSION     DASYRV010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7263
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3913388"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..377)
                     /locus_tag="VGQ24_16580"
     CDS             complement(63..377)
                     /locus_tag="VGQ24_16580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456511.1"
                     /translation="MARVVDARIAVDRREGATRPKSKRRRAPALSSAAGPTAQDLREF
                     QSLKRVFRDLGVSYREYRRQTGEPIAPAVREAAYKFKADPSLTSLVSVAVFLDELDIL
                     TW"
     gene            697..1578
                     /locus_tag="VGQ24_16585"
     CDS             697..1578
                     /locus_tag="VGQ24_16585"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEV8456512.1"
                     /translation="MLLLTLALLSAPSDSAGVRDIQVAPGEILRTTSLGTGEPLVLIP
                     GIFGAAYGYRHITGPLVARGYRTIVIEPLGYGFSSHPKKADYSFTAQTQRVSKVLDEL
                     GVKQALFVAQSSGAGIAFRLAILRPDLVRGLLSIDGGPAESAATPGMKKAFKFGGMIT
                     KFAVDESKLRHDVRKEIVRNSGDTTWVTDAVIRGYTAGQTADMNGSIDAFHQMSKAKE
                     TGSLAGQLHELEQPVRLLVGTVPHPAEVTSDQRELLSDKLPDFKTDSVLGSGQYMSEE
                     QPAAVVEAVTQLDEATR"
     gene            1750..2046
                     /locus_tag="VGQ24_16590"
     CDS             1750..2046
                     /locus_tag="VGQ24_16590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456513.1"
                     /translation="MLTGRYVFTGDSPMQIVARHMNTAPAPPSRHSTFDVSPALDELV
                     LSCLKKKRSDRPATARELSDRLGACDVETARTRETGRQWWETRMEAETAVTFGD"
     gene            complement(2272..2991)
                     /locus_tag="VGQ24_16595"
     CDS             complement(2272..2991)
                     /locus_tag="VGQ24_16595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456514.1"
                     /translation="MAVSSAAIRTKRRTRRFYVGMAVAFAITVFAGFSRSYFLKAHYG
                     TPELSLLLHAHGLVFTTWVLFFLAQTTLVAAGRTYIHRRMGVAGAVLAGLVLIMGTTT
                     AILRVKGGAAPIPGVSPLSFLAVPLFDMVVFAILIGTGLYFRRRLDTHKRLMTLATIS
                     LLSAPIARLPFGVLKAGPPAFFGLTDLFIVALLVYDLATRRRVHPATVWGGLLIVASQ
                     PLRLMISGTPAWLAFAGWLTR"
     gene            complement(3011..3751)
                     /locus_tag="VGQ24_16600"
     CDS             complement(3011..3751)
                     /locus_tag="VGQ24_16600"
                     /inference="COORDINATES: protein motif:HMM:NF012976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intradiol ring-cleavage dioxygenase"
                     /protein_id="HEV8456515.1"
                     /translation="MDRDDLPIGRVLTRREALALLGSTGTLLLFGGSSSSADSFRAGR
                     PPYPCVVRPASTAGPYYVDEKLQRSDIRSDPTDGTVKEGTPLALTLNVSSLAKGACAP
                     LVGAIVDVWQCDAHGVYSDAVDPLFNTTGKKFLRGHQITDQHGVVRFTTIYPGWYPQR
                     TPHIHYKIRSPESAKSPYEFTGQMYFDEGTSDRVYAKAPYAGRGKRTVSNITDRIYQA
                     DGGRQSMITVTPAKDGYSATFDVALDQG"
     gene            complement(3755..4561)
                     /locus_tag="VGQ24_16605"
     CDS             complement(3755..4561)
                     /locus_tag="VGQ24_16605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456516.1"
                     /translation="MMLARFMLAGGLLVSLRELAPAQDWADQFPPAPECQPRRGLSQV
                     AEPELRSAGKARLIVMLQVLGEADRAPLVQADLVPVRRPLPSIRAITPENTARVRLLE
                     TDTAGSHVLSLRGVGYGRFIDTLDVRVGYTDTILVWLQNSNDNSRNTYNCRPRRFRRA
                     GESACVSDSVETAFMLQWAKRYAEPESQKTFRLPAFDSSQVTLVHDEKTCLRAGTLYG
                     DPDDPPRRVIVVRMGPLYLVYDPYEPLPAGEWNIYRLFDRRWRPLFDIMG"
     gene            complement(4569..4928)
                     /locus_tag="VGQ24_16610"
     CDS             complement(4569..4928)
                     /locus_tag="VGQ24_16610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456517.1"
                     /translation="MMAQTRARPLLPVKQFRRHLVKYGAYAGALLAVSLAIGVAGFHW
                     LAGQSGLDALLNAAMLLGGMGPVGSIQGTAGKLFGAAYALYAGLVFIGAAAVAFAPVV
                     HRIIHRLHLEEVEGSET"
     gene            complement(4925..5053)
                     /locus_tag="VGQ24_16615"
     CDS             complement(4925..5053)
                     /locus_tag="VGQ24_16615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456518.1"
                     /translation="MAHTPLSEKLIHSFRVPSEPVETGQRVAADVLADLKVKGYEK"
     gene            5311..5496
                     /locus_tag="VGQ24_16620"
     CDS             5311..5496
                     /locus_tag="VGQ24_16620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456519.1"
                     /translation="MHGWVCVALARTATGYRMYLAVYVLPVSGLTRPYLIAIEPFRRF
                     ILYPAMLRRIRRAWLAV"
     gene            5639..6406
                     /locus_tag="VGQ24_16625"
     CDS             5639..6406
                     /locus_tag="VGQ24_16625"
                     /inference="COORDINATES: protein motif:HMM:NF017551.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NRDE family protein"
                     /protein_id="HEV8456520.1"
                     /translation="MCLVLIALDSHPEYSMIVAANRDEFYDRPTAPAAFWADAPSVLA
                     GRDLKAGGTWLGVDRRGRLAAVTNYRQGQHESPAPRSRGRLVSDFLTGNTGALEHVER
                     VRSEAELYNGFNLIAGDAGGLFYYSNREGRVRRLAPGVYGLSNHLLDTPWPKVAATKG
                     AFGALLNGGAPELTRDLFALLSDRNRPADALLPATGVGREWERLLSSAFIASDDYGTR
                     SSTVVLVGREGSIVFVERNFGPGGAPGAEARFELQSE"
     gene            6644..>7263
                     /locus_tag="VGQ24_16630"
     CDS             6644..>7263
                     /locus_tag="VGQ24_16630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456521.1"
                     /translation="MDTLTPAEDIDSSVWDRIALDSESLEFDRASLEFGRESLDFARE
                     SLEADRKPREFARAPRELAREPREFARDVLRPDSDRLDSDRNCVIAARSSLIAARNSL
                     IAARDSLIAARDSRIAARDSRIGASDSRIAGRDGLIAARISFITARIALGAARNSRIG
                     HRDSRIGNGNSRIATRTRRIAARVSLIAGRDGRIAARNSRIAARIAL"
BASE COUNT         1269 a         2346 c         2424 g         1224 t
ORIGIN      
        1 gggcccggcg gacccgaggg tccgccgccc aggcctcggt gaggcgtggc gctatcgttg
       61 ggttaccagg tcaggatatc gagctcgtcg aggaagaccg ccaccgaaac cagcgaggta
      121 aggctgggat ccgccttgaa cttgtaggcg gcttcgcgga cggcaggcgc gatcggctcg
      181 ccggtctggc gccggtactc ccggtaggag actccgagat cgcggaagac ccgcttgagc
      241 gactggaact cccgcagatc ctgggcggtc ggcccggcag cggacgatag ggccggtgca
      301 cgccggcgct ttgacttggg acgggtggcg ccttcacggc gatctaccgc gatgcgggca
      361 tcgaccacgc gcgccatcac ccgatctgtt agggacttgg gaagctcttc cgactctgaa
      421 cggccggcgc gagcggttgg attagccatt agggacctgc caggatggtg agggaagcgc
      481 ctctgccttg atacttctag gccgtgatgt tcttgagggt aaaatgaagc ttaaccccat
      541 ggacaccaat tagctaggcc gtgtggtttg tgttcaatgc ggaggtcagg taagttgcag
      601 gtgtggggcg ccgtgggcac cccgacattt cgaggttact ccaggggccg tgcgctgcgc
      661 gggccctttt gttttttcct cccctcagag atcccgatgc tcctcctaac gctcgcctta
      721 ctttcagcac caagtgacag cgccggtgtc cgtgatatcc aggtcgcccc cggcgagatc
      781 cttcgcacca ccagcctcgg caccggcgag cccctcgtgc tcatccccgg catcttcggc
      841 gcggcctacg gctatcgcca catcaccggc ccgttagtag cccggggcta ccgcactatc
      901 gtgatcgagc cgctcggcta cggcttttct tcccatccga agaaagcgga ctactccttt
      961 actgcccaga cccagcgagt cagcaaggtg ctcgacgagc tgggtgtgaa gcaggcgctc
     1021 ttcgtggccc agtccagcgg cgccggcatc gcctttcgac tggccattct tcggcccgac
     1081 ctggtccgcg gactgctctc gatcgatggc ggcccggcgg agagcgcggc cacaccgggc
     1141 atgaagaagg cgttcaagtt cggcggcatg atcaccaagt tcgcggtgga cgagtcaaag
     1201 ctccggcatg acgtgcggaa ggagatcgtc cgcaactccg gtgataccac ctgggtgacc
     1261 gacgcggtga tccggggata cacggcgggc cagacggcgg acatgaacgg ctcgatcgac
     1321 gcattccatc agatgtcgaa ggcgaaggag acaggctcgc tcgccggcca actgcacgag
     1381 ctcgagcagc ccgtgcggct cctcgtcggc acggtgccgc atcctgccga ggtgacgagc
     1441 gaccagcggg agctgctcag tgacaagctt ccggacttca agaccgacag cgtgctggga
     1501 tcgggacagt acatgtcgga ggaacagccg gcggccgtcg tcgaggccgt gacccagctg
     1561 gatgaggcga cgcgctgatg gtggctgtcg agtagtccca cccacacatc ctgacgttcg
     1621 acgggtcgag cagatcatct gctcgcatct ctccacgccc gcccgtcggg cgggccagcg
     1681 catctggcgg tcaatggcgc cgagccgtac ccttgatcca cctatctcca acgccatgac
     1741 tcccagtgga tgctgacggg tcgctacgtg ttcaccgggg acagcccgat gcagatcgtg
     1801 gcccggcaca tgaacacagc gccggcgccg ccttcgaggc acagcacctt cgatgtttct
     1861 cccgccctcg acgagctcgt gctctcatgc ctgaagaaga agcgctcaga ccgtcccgcc
     1921 acggcgcggg agctgagtga ccggctcggt gcgtgcgatg tcgagacggc ccggacccgg
     1981 gagactggaa ggcaatggtg ggagacgagg atggaggcgg agacagctgt gacgttcggc
     2041 gactgatggc tgcgatctcg atcgaatcaa gcccgtctgg acacctcacc acccatcgca
     2101 gacgacgcgg gcatgggccc tccggcaggc tccacgacag ccactcctcc cgtcccctgg
     2161 gagcctgcct ccgaacccat acccgcgtcg tctgctccac caccctggct ctggcgggga
     2221 cagcgtcgaa ccccgacggc agagtgcaag gggtggtgaa gggtgaaccg cctaccgagt
     2281 aagccagccg gcaaacgcca gccacgcggg tgttcccgag atcatcagtc gcagcggctg
     2341 cgaggccacg atcagcaacc cgccccagac ggtggcggga tgaaccctcc tgcgggtggc
     2401 gagatcgtag accagcaacg caacgatgaa caggtcggtc aggccaaaga acgccggcgg
     2461 gcccgccttg agcacgccga agggcaggcg ggcgattggc gcgctcagca gcgagatggt
     2521 cgcgagcgtc atcagccgct tgtgggtgtc gagccggcgg cggaagtaga gcccggtacc
     2581 gatcaggatc gcgaacacca ccatgtcgaa cagcgggacc gccaggaagg agagcggtga
     2641 gacgccgggg atcggcgccg cgccgccctt cacccggagg atggccgttg tggtacccat
     2701 gatcaggacc agcccggcga gcacggcgcc ggcgacgccc atgcggcggt ggatgtaggt
     2761 cctgccggcg gcgacgaggg tggtctgggc caggaagaac aggacccatg tggtgaacac
     2821 caggccgtgc gcgtggagga gcaggctgag ctccggcgtg ccgtagtgcg ccttgaggaa
     2881 gtagctgcgg gagaagccgg cgaagacggt gatcgcgaag gcgaccgcca tccccacgta
     2941 aaagcgacga gtccgccgtt tggtgcggat ggctgccgag ctcactgcca tggtgatctc
     3001 cttcgcccct ttatccttgg tcgagcgcca cgtcgaacgt ggccgagtag ccatccttgg
     3061 ccggcgtcac ggtgatcatc gactggcggc cgccgtccgc ttgatagatc cgatcggtga
     3121 tgttggagac ggtgcgcttg ccccggccgg cgtagggagc cttggcgtac acccgatcgc
     3181 tcgtcccctc gtcgaagtac atctggccgg taaactcgta aggcgacttg gccgactcgg
     3241 gcgagcggat cttgtagtga atgtgcggcg tccgttgggg gtaccagccg ggatagatgg
     3301 tggtgaacct caccaccccg tgctggtcgg tgatctggtg gccgcggagg aacttcttcc
     3361 cggtggtgtt gaagagcggg tccacggcgt cggagtacac cccgtgggca tcgcattgcc
     3421 agacatccac aatcgcgccc acgagggggg cgcaggcccc cttggcgagg ctggaaacgt
     3481 tgagcgtcag agcaagcgga gtcccttctt tgaccgtccc gtcggtcgga tcgctccgga
     3541 tatcggagcg ctggagcttc tcgtccacgt agtaggggcc tgcggtgctg gccggtcgga
     3601 ccacacaggg gtatggcggc cggccggctc ggaaactgtc ggcgctcgag ctcgagccgc
     3661 cgaagaggag gagtgtgccg gtcgagccca ggagggccag agcttcccgg cgggtgagta
     3721 ctcgcccaat ggggaggtcg tcgcggtcca taccctaacc catgatgtcg aagagtggtc
     3781 gccagcggcg gtcgaagagg cggtagatgt tccactcacc cgcaggcagc ggttcgtagg
     3841 gatcatatac cagatagagc ggccccatgc gcaccacgat cactcttcgc ggagggtcat
     3901 ccggatcgcc atagagtgtg cctgcccgaa ggcaggtctt ctcatcgtga acgagggtaa
     3961 cctgggatga atcgaaggcc ggcagccgga aggtcttttg cgattccggc tcggcgtagc
     4021 gtttggccca ctggagcatg aaagcggtct cgacggaatc gctgacgcag gccgactcgc
     4081 cggcccggcg gaaccggcgc gggcgacagt tgtatgtatt gcgggaattg tcgttcgagt
     4141 tctggagcca caccaggatg gtgtcggtgt atcctacccg cacatccaga gtatcgatga
     4201 atcggccgta gccgactccc cgcagggaca gcacgtgcga gcccgctgta tcggtttcga
     4261 ggaggcggac ccgtgcggtg ttctcgggcg tgatggctcg gatgcttggg agcggccgtc
     4321 tgaccggcac cagatcagcc tgaaccaggg gggcgcggtc ggcctcaccc agcacttgga
     4381 gcattacgat cagccgggcc ttgccggccg acctgagctc aggctccgcc acctgtgaca
     4441 ggccccgccg aggttgacat tccggtgcgg gcgggaactg gtcggcccag tcctgggccg
     4501 gagccagctc ccggaggctc acaaggagcc cgccggcgag catgaagcga gcgagcatca
     4561 ttccttgctc aggtttcact cccttctacc tcttccagat gcagcctgtg gatgatccgg
     4621 tgaaccaccg gcgcgaacgc cactgccgcg gccccaatga agaccaatcc tgcatacagc
     4681 gcgtacgcgg ctccgaagag cttgcctgcc gtgccctgga tcgatccgac cggtcccatc
     4741 ccgccgagta gcatcgcggc gttcaggagc gcgtccagtc ccgattgtcc ggccagccag
     4801 tggaatcccg cgacaccgat ggcgagggag accgcaagca aggcgccggc gtaggctcca
     4861 tacttcacca ggtgccgcct gaattgcttc acgggaagta gcgggcgcgc tcgagtctga
     4921 gccatcattt ctcgtacccc ttcaccttca ggtcggccaa cacatcggcc gccacacgct
     4981 ggccggtctc cactggttca ctggggacgc ggaaggaatg gatgagcttc tcggatagcg
     5041 gggtgtgcgc catgtggagc tccgaagaag caggctggtg ccgcgagaat gaccgaggct
     5101 gtagagggtc tgctatgcta ccctgaggag ccggactcgg ctaggtgccc tctccgccgg
     5161 ctggcgaggg ctaagtggtg gtccagagtg ccgtcgcggc ggaatcggtg gaggtgattg
     5221 tccaatgcgt gtgtccccgg ccgagtatct gggcctgaag cttcgggcgc ccgagctgct
     5281 gcagggcgta cctctgtacg acgtgtcacc gtgcacgggt gggtctgcgt cgcactggcg
     5341 cgcacggcaa ccggctaccg tatgtacctg gcggtgtacg tgctcccggt ttccgggctc
     5401 acgcgaccgt atctgatcgc gatcgagccg ttccggcgct tcatcctgta cccggccatg
     5461 ctccgacgga ttcggcgcgc ctggctcgcc gtttagggtg cctcgggcta gggtcactcg
     5521 cgcagctggg catcgccagg ccgctctcgc cggcaaccga gtacactaga tacctgctcg
     5581 cctcccagcg ccggagttcg ttggtaagcc cgacccggcg ggagagatat cttcctgcat
     5641 gtgtctcgtc ctcatcgctc tcgattccca ccctgagtat tcaatgatcg ttgcagccaa
     5701 ccgcgacgaa ttctacgatc gaccgaccgc gcccgccgcg ttttgggccg acgccccctc
     5761 agttctggcc ggacgtgacc tcaaggccgg tggtacctgg ctcggtgtcg atcggcgagg
     5821 tcggctcgcg gccgtcacca actaccgcca agggcagcac gagagccccg cgccccggtc
     5881 gcgcggacgt ctggtcagcg acttcctgac tgggaacacc ggtgcgctgg agcacgtcga
     5941 gcgggtccga agcgaggccg agctctacaa cggcttcaac ctgatcgcgg gcgatgccgg
     6001 cggcctcttc tattactcca accgcgaggg ccgagtccgc cgcctggcgc ctggcgtgta
     6061 cgggcttagc aaccacctgc tcgacacgcc ctggcccaag gtggctgcga cgaaaggcgc
     6121 cttcggcgca ctcctgaatg ggggcgctcc cgaactgacg agggacctgt tcgccttgct
     6181 gtccgaccgc aatcggcccg ccgacgctct gctgcccgcg accggtgtgg gccgcgaatg
     6241 ggagcgtctg ttgtcatcgg ccttcatcgc atcggacgac tatggcaccc gctcctccac
     6301 cgtcgtgctg gtcggtcgcg aaggcagcat agttttcgtg gagcgaaatt tcggtcctgg
     6361 aggtgcgccc ggcgcagagg cgcgcttcga gctccagtcc gaatgagacg aggatgccaa
     6421 caggccgtcc aggctcagca aagccgcgca tcggccggcc gcctgcctcc tgcgccagcc
     6481 ttgtcatcca aaggaaccgg aatgatatgg gcttcgacag tgtccgattg cgtcgtgctg
     6541 ccacacgatt gccccgccaa gcggaagggt tgcaacctcc ggagtcacgg ttaccctgtc
     6601 cggggcatcg attgcaggcg ccggaccggg atcgcggttg ttcatggaca cgctgacacc
     6661 cgccgaagac atcgattcct ctgtctggga cagaatcgca ctcgacagcg agtcgcttga
     6721 gtttgacagg gcgtcactcg agtttggcag ggagtcgctc gactttgcca gggagtcgct
     6781 cgaggctgac aggaagccgc gcgagtttgc cagggcgccg cgcgagcttg ccagggagcc
     6841 gcgcgagttt gccagggacg tactccgacc tgacagcgac cgcctcgact ctgacaggaa
     6901 ctgcgtgatc gccgccagga gcagcctcat cgccgccagg aacagcctga tcgccgccag
     6961 ggacagcctg atcgccgcca gggacagccg catcgccgcc agggacagcc gcatcggcgc
     7021 cagcgacagc cgcatcgccg gcagggacgg cctcatcgct gccaggatta gcttcatcac
     7081 cgccaggatc gcactcggcg cggccaggaa cagccgcatc ggccacaggg acagccggat
     7141 cggcaacggg aacagccgca tcgccaccag gacccgccgc atcgccgcca gggtcagcct
     7201 gatcgccggc agggacggcc gcatcgctgc caggaacagc cgcatcgccg ccaggatcgc
     7261 act
//
LOCUS       DASYRV010000630         1736 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3917338, whole genome shotgun sequence.
ACCESSION   DASYRV010000630 DASYRV010000000
VERSION     DASYRV010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1736
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3917338"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            244..954
                     /locus_tag="VGQ24_16635"
     CDS             244..954
                     /locus_tag="VGQ24_16635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456522.1"
                     /translation="MIYSGLTGVVAALMFEGYLRHKPRDHALPTRSEATDVTSAISPA
                     ADSLQVVVSWDLTLSTPEGQPDSIRIKVVPALGNDSLIATQPATVFADTAYLPAPAPG
                     QTLTGASCVVALHPVEPLTEMCTPWQYVRPTATAQAGLAAVPGRIVIQPTGLQVDSDV
                     GGRCAKWQRTHPGESVWRVVNRVAIRECTGVNGKPTVAQFCAFMVLSDGRRVKTANSA
                     NNSYCEELFVEWTRERYS"
     gene            complement(906..>1736)
                     /locus_tag="VGQ24_16640"
     CDS             complement(906..>1736)
                     /locus_tag="VGQ24_16640"
                     /inference="COORDINATES: protein motif:HMM:NF024818.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEV8456523.1"
                     /translation="GLAFLSVGAAVLLMHALNRFSADTRPALLVALAVSALYGGLGPG
                     LLALALAGLVTRDPVVLIAGAALAGVCATFRRARTSPPTLRGPSAEGSAGEETVPEPP
                     PNRFERLEAAPVGSSPGAARVAPAFAKLTTEATWRFHHEQPLDITLPEDEQVEHLYLY
                     SVLAECNDAFARMYGFRAAADVIGTRLVVFLPPSNPENVAYLRSFIRSGYRLEDAESH
                     EIDRYGNAKYFVNNLVGIFERGQLVGAWGTQRDVTEGKRSGDPQEYRSRVHSTKSSSQ
                     "
BASE COUNT          313 a          559 c          585 g          279 t
ORIGIN      
        1 tggtgtgacc cggttcatga cggagcgagg acgactttcg cctgcgctgc agcaggatct
       61 ggcgcggctc ggatcgaagg gcataccggt ggatatcgtg ttcgaaactc ccaagctgcg
      121 gtgagctcgg cgatggatga aaccgagccg atagaagtgg aagtacgggt tcatcgtgga
      181 cgcaggcgcc gaacggaccg accgcccccg gacacgcctc gccctccaaa tgtcaggaac
      241 tggttgatct actcagggct gacgggtgtg gtcgcggccc tcatgttcga aggatatctg
      301 aggcacaagc cgcgagatca cgcccttccg acgcggtcgg aagcgacgga cgtcacgtcg
      361 gccatctccc ccgccgccga ctccctccag gtggtggttt cctgggatct cactttgtcc
      421 acccccgagg ggcagccgga ctcgatccgc ataaaggtgg tccccgccct ggggaacgac
      481 agccttatcg cgacgcagcc tgccacagta tttgccgata ccgcctatct gccagcgccg
      541 gcaccgggcc aaacgctgac cggcgcctcc tgtgtcgtcg cgctgcaccc ggttgagccg
      601 ctcaccgaaa tgtgtactcc atggcaatac gttcgcccca ccgccaccgc ccaggcaggc
      661 ctggcggcgg tgcctgggag gatcgtcatt cagccaaccg gcctccaggt ggactcggat
      721 gtcgggggaa ggtgcgccaa gtggcagcgg acccatcccg gcgagtcggt ctggagggtg
      781 gtgaaccggg tggcaatacg ggaatgtacc ggcgtgaacg ggaagccgac cgtggctcag
      841 ttctgtgcgt tcatggtgtt gtcggacggt cggagagtaa aaacagccaa ttcggccaac
      901 aacagctact gcgaggagct ctttgtggag tggacccgcg agcggtattc ctgagggtcg
      961 cccgaacgct tcccttccgt gacgtcccgc tgggtccccc aagccccgac cagctgcccc
     1021 cgctcgaaga tccccaccag gttattcacg aagtatttcg cgttgccata gcggtcgatc
     1081 tcgtgcgact cggcgtcttc caaccggtag ccgcttcgga tgaagctgcg taggtaggcg
     1141 acgttctccg ggttcgaggg cggcaggaag accaccagcc gggtaccgat cacgtcggcc
     1201 gccgcccgga agccgtacat gcgggcaaag gcatcgttgc actcggccag cacagaatac
     1261 aggtagaggt gctcgacctg ctcgtcctcc ggcagggtga tgtcgagcgg ctgctcgtga
     1321 tggaaccgcc aggtggcttc ggtggtgagc ttagcgaatg cgggtgccac ccgggcggct
     1381 ccgggcgagg acccaaccgg cgcggcctcg agccgctcga accgattggg cggcggttcc
     1441 ggcaccgttt cctctccggc tgaaccttct gcagaaggtc cccggagagt cggggggctc
     1501 gtgcgggcgc gccggaaggt ggcgcacaca ccagcgagcg cggcgccggc gatgaggacc
     1561 accgggtcgc gggtcactag accggcaagc gccaaggcca ggagcccagg ccccaaaccg
     1621 ccgtagagcg cgctcacggc aagggccacc agcagcgcgg gccgggtgtc tgccgagaac
     1681 cggttgagcg cgtgcatcag cagcacggcg gcaccgaccg agaggaatgc cagacc
//
LOCUS       DASYRV010000631         3214 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2871690, whole genome shotgun sequence.
ACCESSION   DASYRV010000631 DASYRV010000000
VERSION     DASYRV010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3214
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2871690"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1195)
                     /locus_tag="VGQ24_16645"
     CDS             complement(<1..1195)
                     /locus_tag="VGQ24_16645"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEV8456524.1"
                     /translation="MSPSSNAAWTPPREIQVRDSVARPSVPPDLEQRIRRLTLAEVVD
                     LGLRNNPATRVSWANARAAAAAYGSARGAYVPTIDGDVTATRLKTVASQGRSAVTQSV
                     LSPSLNLSYLLLDFGGRSGNIGAARNALLAADFTHNATLQDVILQIQTAYFQYVANRA
                     LLEAQRTTTREARANLAAAEERNRVGVATIADVLQARTAASQAELAAQTTEGDLQTSR
                     GALALSLGLPANLPYDIDSTAGQLPVAVLADSVDVLIAGAVEARPDLAAARAEFEASR
                     SEISVARASRLPSLVLNGVGGRTYTSSLPQGGNNYTLSVGLQIPLFAGFSRLFDQRQA
                     AALADAARARADALGQQVVFEVFRSYYALQTAGRRVRTADDLIASATQSSKVALGRYK
                     AGVGSV"
     gene            complement(1282..1764)
                     /locus_tag="VGQ24_16650"
     CDS             complement(1282..1764)
                     /locus_tag="VGQ24_16650"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEV8456525.1"
                     /translation="MDAPTVNFIERMGLALESDGLPRIAGRIFGLLLVSEDARSLDDL
                     AAELRVSKGSVSTNARLLEQRGLLERVCRPADRRDYYSVLPDLFIHTMAQRLARWQRF
                     HEAISAARTSLPIRSPEVRDRLEEYEQAYAFMSQVIREALTRWHESRDDRLTRVGVSG
                     "
     gene            complement(1920..>3214)
                     /locus_tag="VGQ24_16655"
     CDS             complement(1920..>3214)
                     /locus_tag="VGQ24_16655"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEV8456526.1"
                     /translation="MELPPGLEPFFRGLPPMQQEPRFQEGSGSGFVVSKDGYILTNNH
                     VVDGSDQVVVRLLDRREFKAKIVGTDPNTDLAVLKIDAKNLVPAPLGNSSVARVGEWV
                     LAVGNPLGDNLTFTVTSGIISATGRSLALPGQSDRTIQDFIQTDAAINPGNSGGPLVS
                     VQGEVIGINSAIASQTGYYSGYGFAIPIDLARRVMDQIISEGRVHRVALGITVQDATP
                     NDAEYVGLPDIRGVLVQDFTEKSPAQKAGIESGDIIVAVDGKPVEYVGQLQQQIAFRK
                     AGESVKVEVARKGGVRKTLEVRLQEVAAPRDVASRDDNTGDSADSSDEAAASIDLLGL
                     TVQPVDQDAVQQFELEPGQRGLLVTGVVPGGPSDGEVADPDAGGPDIILSVEGKPVKS
                     VADLKGALKGFKKDDIVSLRIYNTQAKSRRIERIRLGE"
BASE COUNT          548 a         1075 c         1058 g          533 t
ORIGIN      
        1 agaccgatcc caccccagcc ttgtagcggc cgagcgcgac cttgctggat tgcgtggcgc
       61 tggcgatcag atcgtcggcg gtgcgaaccc gccggcccgc cgtctgcagc gcatagtagg
      121 agcggaacac ctcgaagacg acctgctgtc ccagggcatc ggcccgagcc cgtgccgcgt
      181 ctgccaatgc tgccgcctgc cgctgatcga agagccggga aaagccggca aagagcggaa
      241 tctgaaggcc caccgagagg gtgtagttgt tgccgccctg cggcagcgac gaggtatagg
      301 tccgtcctcc aactccgttc agcaccagcg aggggagccg gctggcccga gccaccgata
      361 tctccgaccg ggaggcctcg aactccgcgc gggcggccgc gagatccggc cgggcttcaa
      421 ccgctccggc gatcaagacg tctacgctgt cggccaggac cgcgaccggc agctggccgg
      481 cggtcgaatc gatgtcgtat ggaaggttgg ccggcaatcc gagcgatagc gccagtgcgc
      541 cgcgagaggt ctgcaggtcg ccctcggtag tctgagcggc gagctcggcc tgtgacgcgg
      601 cggtacgagc ctggagcacg tcggcgatcg tcgccacccc tacccgattc cgctcttcgg
      661 ccgcggccag gttggcgcgg gcctcgcgag tcgtggtccg ctgcgcctcg agcagggccc
      721 gattggcgac gtactggaag tatgctgtct ggatctggag gatcacgtcc tgcagagtgg
      781 cattgtgggt gaagtccgcg gccagaagcg cgtttcgagc cgccccgata ttgccggagc
      841 gaccgccgaa gtcgagcagc agataggaga ggttgaggct cgggctcagt actgattggg
      901 taaccgcgct ccgcccctgg gaggccactg tcttgagccg ggtggcggtc acatcgccgt
      961 cgatcgtcgg cacataggca ccgcgggccg acccatatgc cgcggccgct gcgcgagcgt
     1021 tggcccagga gacgcgggtg gccggattgt tccggagccc tagatccacg acttccgcga
     1081 gggtcagccg gcggatccgt tgctccaggt ccggtggcac ggaggggcgg gccaccgaat
     1141 cacgtacctg gatttcgcgc gggggtgtcc aagccgcgtt cgatgacggg gacacgcccg
     1201 gtactccatt gacggacggc gtcccgacac atccgacgca caccaacagc agacacgcag
     1261 cgaggccact cgagcgcgag ctcaccccga cactcccacc cgggtcagcc ggtcatcccg
     1321 gctctcgtgc cagcgagtca gcgcctcacg aatcacctgg gacatgaagg cgtaggcctg
     1381 ctcgtactcc tcgagccggt cccgaacctc cggactccgt atcggcaggc tggtgcgggc
     1441 cgcgctgatc gcttcgtgga atcgctgcca ccgcgcgagt cgctgggcca tggtgtgaat
     1501 gaatagatcc ggaagcacgc tgtagtagtc ccggcggtcg gcgggccggc agacccgctc
     1561 gagcagaccg cgctgctcca gcaggcgcgc attggtgctc acgctcccct tgctgactcg
     1621 gagctcggcg gcgagatcgt ccagcgaccg ggcatcctcg ctgaccaaca ggaggccgaa
     1681 gatccgcccc gcaatgcggg gaagcccgtc ggattcgagg gcgagcccca tccgctcgat
     1741 gaaattcacc gttggcgcat ccatggtact cctcattcgg gcttagacgc agaccccaag
     1801 cggaagttaa tgcgttcagt atcaattaaa tgacggaagg gtcacgggct ggctcgcaaa
     1861 cgaagcgcgc accccggcaa atgggatgcg cgctcccgga atctatgact gcagtaagcc
     1921 tattcgccca agcgaatccg ctcgatgcgg cgggacttgg cctgggtgtt gtagatccga
     1981 aggctcacga tgtcgtcctt cttaaacccc ttgagcgccc ccttgaggtc ggccacgctc
     2041 ttcaccggtt tgccttcgac cgacaggatg atgtcgggac cgcccgcgtc cggatcggcc
     2101 acctcgccat ccgacggtcc accggggacg accccggtca ccagcagccc tcgctggccg
     2161 ggctcgagct cgaactgctg caccgcgtcc tgatccaccg gctgcaccgt gaggccgagg
     2221 agatcgatcg aggcggcggc ctcgtcgctc gaatccgccg aatcgccggt gttatcgtcg
     2281 cggctcgcga cgtctctggg cgcggcaact tcctggaggc gcacctcgag ggtcttgcgc
     2341 acaccacctt tgcgcgccac ttccaccttc accgattcgc ctgccttgcg gaaagcgatc
     2401 tgctgctgca gctggccgac gtactcgacc ggctttccat ccaccgccac gatgatatcg
     2461 ccggactcga tcccggcctt ctgagccgga gacttctcgg tgaagtcctg aaccaggacc
     2521 ccccggatat ccggcagacc gacgtactcg gcatcgttgg gggtggcgtc ctgaaccgtg
     2581 atgccgagcg ccacccggtg gacccggccc tcggagatga tctggtccat gactcgccgg
     2641 gccaggtcga tcgggatggc gaagccatag ccggagtagt acccggtctg gctggcgatg
     2701 gccgagttga tgccgatcac ctcaccctgc acgctcacca acggaccgcc ggagttgccc
     2761 gggttgatgg ccgcgtcggt ctggatgaag tcctggatgg tgcggtcgga ctgtcccgga
     2821 agcgcgagac tgcggcctgt cgcgctgatg atgcccgaag tcaccgtaaa ggtgagattg
     2881 tcacccagag ggttacccac ggccaggacc cactcgccga cccgggccac actgctgttg
     2941 cccagaggag cagggacgag gttcttggcg tcgatcttga gcaccgcgag gtcggtattc
     3001 ggatcagtcc cgacgatctt ggccttgaac tcgcgccggt ccagcaggcg caccaccacc
     3061 tgatccgagc catccaccac gtggttgttg gtgaggatgt agccgtcctt cgagacgacg
     3121 aagcccgagc cggagccctc ctggaagcgg ggctcctgct gcattggagg cagcccgcgg
     3181 aagaacggct ccaggcctgg cggcagctcc atgc
//
LOCUS       DASYRV010000632        18079 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3923052, whole genome shotgun sequence.
ACCESSION   DASYRV010000632 DASYRV010000000
VERSION     DASYRV010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 18079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18079
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3923052"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..656
                     /locus_tag="VGQ24_16660"
     CDS             <1..656
                     /locus_tag="VGQ24_16660"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEV8456527.1"
                     /translation="NIRRAEFTLRSFDLRVRRGEAVALIGSNGSGKSTALRLIAGIYQ
                     PSSGTIRTCGRLTAVIELGAGFHPELTGADNVALYAAVLGLGRRELMARFDEVVEFAE
                     MREFMDTPLKYYSSGMEARLAFSVAVCLQPDILLLDEVLAVGDQAFRDRCLARLRAYH
                     ARGGTLILVSHEVDQVRELCSRAVWLEQGELRMDGDVDQVLAAYRANDSLDRSRGAS"
     gene            653..1813
                     /locus_tag="VGQ24_16665"
     CDS             653..1813
                     /locus_tag="VGQ24_16665"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEV8456528.1"
                     /translation="MITSTAEPLVSVVLPCLNEEAAIGSCIEKIQRTFAEAKIAGEIV
                     VCDNGSTDHSVAIAERLGARVVHQPVRGYGNAYLKGFASARGQYLIMGDADDTYDFTL
                     IPKFLELLTTQGYDFVTGSRYLNGGHRHITPLHRIFGNPALTAILNRLFGTRYTDVYC
                     GFRGFSRRAYDLIRPMTPGMEFNLELAINAGLAGLRVGEIPIELGPRKGESKLRTFRD
                     GWRSLRMMLLYSPNTVFLLPGSVLLALGLAIHIATLLGAVRWDGRPASGVTGVFATIF
                     SVVGFQILSLGLHAKTYSWSRRFDPHNRSLERFYRHFNLETGLLLGGGLVLGGGVVLA
                     ALIIEWLRSSLLPLPNPAWASFGATLFIVGCSTLFSSLFISAMSMSRPRDGA"
     gene            1810..3489
                     /locus_tag="VGQ24_16670"
     CDS             1810..3489
                     /locus_tag="VGQ24_16670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456529.1"
                     /translation="MSEAVLRWNRADWRYLAVLLTVAVGLWLPRLRGPLDLRYDAGVY
                     YILGTSLAEGRGYRLLNEPGAIEAIQYPPVVPAVGAVFERALGTDDPAVVGHWLRLGS
                     VLLYAGYAAAVYVMSRRWLTPGYACLVALLSVVHSHTIFLSDFFAADVPYAFLSTLFF
                     AVPGGPAAGLLAVGAYGVRSAGIVLLGAWVGESLIRRRFSQAAVRSAVAAAAVLAWMT
                     YTAHVKASPTFSRPTYEYQRAGYQFYNVDYAENMSYVDPFRPELGRVTGRKAMDRVLE
                     NLRGMPMTLGEGISVHRGWWYGEVEKLNQRLTGMQVPKWVADAAMIMLCVPVLCGLLL
                     LALRGQVLLVLYVLGSLFIIAVTPWPIQFVRYLVPLTPFLTLAVVVVLAASAKRARTT
                     GLRRWRALEVALVGMVALIGAQQIVTLYRSMSKYPSPAVFSDRAGKRHEYQLFFYDRS
                     WRLHDDGLDWLAHQARPGEIVATSTPHWAYLRTGLPAVMPPYEADARRAAVLLDRVPV
                     TYLIVDQLSFLDVGRRYTIPAIQAAGNHWKLIYAVNDSGPKIYRRVGDSAK"
     gene            complement(3459..5036)
                     /locus_tag="VGQ24_16675"
     CDS             complement(3459..5036)
                     /locus_tag="VGQ24_16675"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEV8456530.1"
                     /translation="MKTFRPALGPVLLVILVAAVLRLFLAARQDLWADELFSLAVATG
                     HSLEHPASAAVPALGDFVEPSTAVSPETFRRYLEHEPTPAGPKPVIRAVLLSDTSPPL
                     YYLALMAWTRVAGTSDFALHACSVAWALATMPLIWLLGYRLGGSREALMACVLFAVAP
                     VSLYYSVEARMYSQLWFLSALTAWLTLRLHDREGAGALALWALASAAGFLTHYFYAFV
                     WAACVLWLAVRPGRCSRVQLAVAALATLILIAPWYQLVPASLARWRVTGYWLDGRPPV
                     GTLVTSPLTLGWSLLSGRGVWGGVKAVDTIGAVLVLALGLALLRRGREAAIGGGRDLI
                     WLWAIASCAGPVVFDLLRGTSTSLISRYALAGMPAAMLLVALAIGALPAGLGFGTLLL
                     VVATWTPGLRDVFRHRARAWEPYRQAAAQVGAWARPDDLILVHSIPSGVLGIARYLQA
                     DVPIAAWVGQLGARRMPDDLTALLAGRDRVALIRIHEVGEPAPEEQWLRANATVLRDE
                     RRDGAVIVYFALSPTRR"
     gene            5068..6783
                     /locus_tag="VGQ24_16680"
     CDS             5068..6783
                     /locus_tag="VGQ24_16680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456531.1"
                     /translation="MQNNVAGMPRRLGRHDVVCVGGVLLLWLAVWAARLDGPIDLRWD
                     ASTYFVLGTSLAEGKGYRLLNEPGEIEAVQYPPLLPALVAAHQLVLGTNDYVIVGSRL
                     RRCYFLLSGAYLLTAYFVVRGFLDPPLALAAIAGTGFSFYSFLYPSDSLYAEIPFALV
                     SMLFLLCLRRRDQPGYGIVAGLLAGAAYLIRTAGIALLAVWVVDSLLRRRFRQAALRA
                     AAAALPVIAWQAHTARVSESAAYHEPAYPYQRAPYYYSNVTYRENSWLVDPFQPELGR
                     TSPPDLVMRVARNLLALPRSIGESAWIAVASAPYLLDKLYRGLRLPWSQPPREAILAV
                     TSLLLALIGGGALVGAGLLLKRGEWLFPLYFGLSLAMISLTPWPSQFWRYLAPLTPLS
                     LMFLILALDAAARRLARQGKRGRTAGAFVATAPLAAMLLVQVVIAAGFLRLLPISYYA
                     ADGTEQPGRLLTYEPVWHALDPALEYLRRHAESGKVIATSVPHLAYLRTGHQAVLPPL
                     EPDPDTAARYLDAVPVSFLVLDELGLPGISERYAAPVVARHPASWRLVYTAPGSKARV
                     YERVR"
     gene            6784..8529
                     /locus_tag="VGQ24_16685"
     CDS             6784..8529
                     /locus_tag="VGQ24_16685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456532.1"
                     /translation="MSTSRSRSADVIAWGIWAAMFAAALLFVARYASNVPSWDDWDMV
                     PTLTRNQPVTWDWLWSQHNEHRVPIPRLIFLGLNRLTLVDMRVTMYFDVVVMAALAAA
                     MMLTAARLRGRPAAEDAFFPLVLLHWGQAANLLWGWQLQFFASVALACVALLSIVRAG
                     TTVPIRRAAVTVGVCVLLLPLCGANGLGMVPALAAWPLALALLPENWTGGVNTRGRHV
                     IAALGVGALALTALYFVGWERVPYHPKSQSVYQSLKTSVQFATIGLGPATRDSWPLSG
                     LATLAALGVTTLLLIRVWRDRPAERARVAGLLCFLAALASLALGLGLGRNGFETRYVT
                     LALPAWCALYFAWLLYGDRARRWAPAALTLASLAALWGNTVFGLDYARELRAQLGGFE
                     RDLAAGVPLHHLLHRYGPWLHPHQDMPRRYLPMLKQARVGNYTALQLDPAFRVIPLDL
                     HPVETTLLAWHDSTARVLGPRPALLFRLPGDRVVQGIRLRYRYRSDDGTLPYIGIRWK
                     PGSQTEFAPERFYKYSPTGDRANWERGTWDSIHDTATTLTVWISDTIREVGITPDFRP
                     AVFKIDELSLLVPKD"
     gene            8531..9880
                     /locus_tag="VGQ24_16690"
     CDS             8531..9880
                     /locus_tag="VGQ24_16690"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEV8456533.1"
                     /translation="MASPSVVVLGGGLSGVAAAYTLARSGISDVTVVERGDTLGGLAG
                     SFEREGHFYPLGYHHILHRDRTLLYFLDLIGALPRVVWRRIRMLFHLGGKTYDLGSPG
                     GFLRFPMPPADKARFVRLMLKAFGKRDWSDWQDRSAAELIDHYAGPGVREVLFERLTR
                     LKFELPCAEVSGAWLGARLHYREGSAPLGYIAHANWTKVLCDGVTRLLEEAGVGIRTQ
                     ARVARLHTAGNRVIEAELESGERIRGDIFVSTVPTEIYLRLLPGDTTPQLASIRYSAL
                     ISVICATRQVVRPEAYWINLASMDRTAGAIFLLSALNPTIGRPGDTCVNFVTHLRGRD
                     RSLFREDDEHLIAKYAEDFREVFGFELEPFWTHVARVPMYSPVFDRGFRNPPITSASW
                     ENVYFAGNYRTFPSIVSTGTALGSGVATGSAVLDALGQSTDLPDAVANFRLRSMPRA"
     gene            9906..10814
                     /locus_tag="VGQ24_16695"
     CDS             9906..10814
                     /locus_tag="VGQ24_16695"
                     /inference="COORDINATES: protein motif:HMM:NF006088.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HEV8456534.1"
                     /translation="MTTLDFRPTVKSQLLAVPQALRAHQWVKNLLVFVPVLLDHKIFD
                     PLVLSKAMVAFAAFCFAASGAYVLNDLLDGDADRRHRTKRNRPFAAETLSRSFGFSMV
                     PLLFTAALLCSLWLSPKFLILLVTYVVLTTAYSIYLKRIAILDVLLLAGLYTLRVLAG
                     VAASHVRFSTWLLAFSMFLFLSLAFLKRYAELSDLQGGATEALERRGYLRGDREWLGS
                     MGGASGYLAVLVLALYINSEQVMALYRRPLVLWLICPLLLFWISRMWLLAHRGRIDQD
                     PIVATVRDPASYVIGALVALVLYTAA"
     gene            10832..12136
                     /locus_tag="VGQ24_16700"
     CDS             10832..12136
                     /locus_tag="VGQ24_16700"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEV8456535.1"
                     /translation="MRTYQSWGRYPRTQHTRVLPVFWRSEPPALGDITESVLPFACGR
                     SYGDSCLNDGGALVDVTGLRRFIAFDEPQALLRCEAGVTLAEVLSLVAPRGWFVPVLP
                     GTQWVSVGGAIANDIHGKNHHRAGTFGAHVTCLELLRSTGERVLCSPERNADLFRATI
                     GGLGLTGLILWAEIRLKQVAGSAIAMERIRFACLEEFLDLSNSDQAYEYTVAWVDCLA
                     QGRRLGRGLYLRGDHASRSVTPSEPHAARLKVPIDLPSGLINRATLALFNACYYRSQL
                     RAKLRKTVHYEQFFFPLDRIGAWNRLYGRSGFFQYQCVVPDDLGRTIATLLAQVARSS
                     ETPALAVLKRFGTIQSPGLLSFPRPGITLAIDFANRGPATLALLEQLDRLVVDAGGAV
                     YPAKDARMSPASFRRFFPAWETFASHVDPKFSSSFWRRVTAA"
     gene            12146..12880
                     /locus_tag="VGQ24_16705"
     CDS             12146..12880
                     /locus_tag="VGQ24_16705"
                     /inference="COORDINATES: protein motif:HMM:NF005489.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEV8456536.1"
                     /translation="MRVLIVGATSAIAGETAKRYAEDGGRLFLTGRDAARLASVRDDL
                     LVRGAAQVETAEMDVARIPGHRQVIDSTIAALGGLDVALIAHGTLPDQGLCQQNVSET
                     LDAIQVNFTATVALLTLLANYFEAQRNGCIAVITSVAGDRGRQSNYVYGAAKGGVDRF
                     LQGLRNRLFRSGVAVVTIKPGFVETPMTAGMKKGLLFASARRVGRGIHRAIERRRSVV
                     YIPWFWRPIMVVVRSLPEGLFKRLRL"
     gene            12888..14534
                     /locus_tag="VGQ24_16710"
     CDS             12888..14534
                     /locus_tag="VGQ24_16710"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEV8456537.1"
                     /translation="MRRCFPIWIPLCFFAVGAAAQQPSPATVSGARVARAVDPNVLRA
                     HLEFLADDALEGRRPGTRGGDLAAKYIAAQFARLGLQPAGDSGTYYHHVPIITLTPQP
                     TVKVGGAPTDLAYRTDYVLWSMRNDSTVNAKGDLVFVGYGIMAPEYDWNDYEGVDVKN
                     KIVVALVNDPGLRDSTIFRGPILTYYGRWTYKIEEAQRQGAAGILLVHTTESATYPWS
                     TVQSSWTGPQVRIEEPPKSLLIAGWLNQDAAARLFRLGGQDLSSLMDQAAHRGFRPVP
                     LGLQLDATVRSDIRRSETSNVLARWPGRGPLARQAVLIGGHYDHFGIGAPVDGDSIYN
                     GAEDNASGTAAVLAAAEAFVRSGVRTGRSIVFIGFTAEEAGLLGSQALVAKPTIPLSR
                     IAAILNLDVMNLYGRTRDVSALGLDQSSLGAVFTSAARAEGLKVTVNRDALLRGSYFR
                     SDHFPFAKAGVPGTSIENGEQYVGQAADYGSKRKREYTEKRYHQPSDELLPWFSYDGA
                     VQQLRAIVRTAVAVANAPSQPTWNRNSEFRQAGELRLGRE"
     gene            14764..15783
                     /locus_tag="VGQ24_16715"
     CDS             14764..15783
                     /locus_tag="VGQ24_16715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456538.1"
                     /translation="MAPEGYASPEVVEAAQRAILESKAALAVVKKQKDTGVWGGNLLG
                     LATSAAQGVKDTGTIPQYRRLLQLEWPRSGRPFKLADRVLFRLLSRDEDPSLLFEFQK
                     SVKSDPEAEAWARGIMREASSAALAEAGYADDPRLRGAGHKIASAISQFLRSPLAEKP
                     FVKAGKQIVLHPEAHPPSWYSVAMLASMPNLQRERAGFTERLGHYLAQPAPKKAFVIQ
                     VGKKTVRPQHLILGEPIEADAKGQAKDIPLALHYIELLARMGALEWAPVATKVLARLL
                     KDCDDQGVWRPKNLRSLPKQGNKITYHYYPLHIDSKTTEGKEMDITFRLAVIAKVLGW
                     SLSYS"
     gene            15826..16515
                     /locus_tag="VGQ24_16720"
     CDS             15826..16515
                     /locus_tag="VGQ24_16720"
                     /inference="COORDINATES: protein motif:HMM:NF014080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEV8456539.1"
                     /translation="MPRIDLTHFGFTPTESLVYEVLLTSGPGTGYAIARAAGLARANA
                     YSALEGLVAKGAARAEGGRPRQYRPEAPAGLIARIAHNHGLALDRLTTDLETIAVPST
                     PTVVEIDSGRAVLQLITHDVARASRSVGLLVPPDAFPLLAPALRRPVSAGLPVSLWST
                     GPVELGFAPVELVSGDHGWPGMPIIAVVDDRSAIVGFRQGNEVRGHWSTAPAFVAAAR
                     LALERFGAPNG"
     gene            16508..18067
                     /locus_tag="VGQ24_16725"
     CDS             16508..18067
                     /locus_tag="VGQ24_16725"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEV8456540.1"
                     /translation="MGDPLHSAFLELQRGYLASMPARLEELRSDLATMREGSTEAAGS
                     LKARLHRLAGSGGSFGFLDLSAIAREAEHYLASNPGLQDSSGLAPMLDRLEEAVRRAD
                     RQLDTPVAGMPPDVVPRALLVMRPSPQRERIAQELRNAGYEVRLGSRQDDPAATPFEE
                     FPHLLVIGGEAGDGDPSAVASAWTNNPSRRPGAVVLVETLRGVDRLRAIAAGVDAVFP
                     AEQVEQKLARYARTFARIGPPPSNVLLVDHDAVLAARIVPALEHANVRVARCLPTQAV
                     HDLLEREMPDLLLLHTRLVGSDAFALARMIRQDSRYHLLPVVFIGDDTDADRVAALRA
                     GADDFLSVAAEAELLAQTVVTRAARGRRLREMVHRDGLTGLLNHATLMAELENAVDYS
                     QRHGEPLAFVLFELEGFRKLSERLGPRAGDEVLLHVASVFRSNVRASDVIGRYGWEAF
                     GMLLRGASASGAAVLAEKLHRVLGEQPAHTTASEVVSLQVKVGSAVFPRDGTTAAELT
                     QAADRALRSKR"
BASE COUNT         2796 a         6090 c         5905 g         3288 t
ORIGIN      
        1 tcaacatacg gcgggccgag tttaccctcc gcagcttcga tctccgggtc agacgaggcg
       61 aggcggtcgc gctgatcggc tccaacggct ccggcaagag cacggcgttg cgcctgatcg
      121 ccgggatcta ccagccctcc agcggaacga ttcgcacctg cgggcgtctc accgccgtca
      181 tcgagctggg agcgggcttc caccccgagc tgaccggcgc ggacaacgtg gcgctctatg
      241 cggcggtcct cggtctcggg cgcagggagc tgatggcacg ctttgacgag gtggtggagt
      301 tcgctgagat gcgggaattc atggacaccc cgctcaagta ctactcctcc ggcatggagg
      361 cgcggctcgc cttctcggtt gccgtgtgcc tccagccgga catcctgctc ctcgacgagg
      421 tgctcgcggt cggagatcag gcgttccggg atcgttgcct ggcccgcctc cgcgcctacc
      481 atgcccgggg gggcaccctg atcctcgtgt cccatgaggt ggatcaggta cgggagctct
      541 gctcccgagc cgtctggctg gagcaaggcg agctgcggat ggacggcgac gtggaccagg
      601 tgctcgcggc ctaccgggcc aacgactcac tcgatcgcag caggggagcc tcgtgatcac
      661 atcgaccgct gagccgctgg tctcggtcgt ccttccttgt ctcaatgagg aggcggcgat
      721 cggcagctgc atcgagaaga ttcagcgcac cttcgccgaa gcgaagattg ccggcgagat
      781 cgtggtctgt gacaacgggt caaccgatca ctccgtcgcc attgccgagc gcctgggggc
      841 ccgggtggtg caccaacccg tgcgcggcta cggcaatgcc tacctcaagg gcttcgccag
      901 cgcccgtggg caatacctga tcatggggga tgccgacgat acctatgact tcaccctcat
      961 cccgaagttc ctcgagctgc tcaccaccca ggggtacgac ttcgtcaccg gaagccgcta
     1021 tctcaacggc gggcaccgcc acatcacgcc gttgcatcgg atcttcggga atcccgcgct
     1081 caccgcgatt cttaaccgac tcttcggcac caggtatacc gacgtctatt gcgggttccg
     1141 gggcttcagc cggcgggctt atgacctgat ccgacccatg acccccggaa tggagttcaa
     1201 cctcgagctg gccatcaatg ccgggcttgc ggggttgcgg gtgggcgaga tcccgattga
     1261 gctgggaccg cgcaagggtg aatcgaagct gcgcacgttc cgcgacggat ggcgcagcct
     1321 gcgcatgatg ctgctctact ctcccaatac cgtcttcctt ctgcccggct ccgtcctgct
     1381 ggctctcggc ctcgcgattc acatcgccac gctgctcggc gccgtgcgct gggatgggcg
     1441 gccggcctca ggggtcaccg gggtgttcgc taccattttc agcgtggtgg gcttccagat
     1501 tctgagtctc ggtctccacg ccaagacgta ctcctggagc cggcgcttcg atccccacaa
     1561 ccggtcgctg gagcgcttct atcgccactt caacctggag accgggctgc tcctgggcgg
     1621 gggcctcgtc ctgggaggtg gcgtcgtcct ggccgcactg ataatcgaat ggttgcgctc
     1681 ctctctgctg ccgctaccca atcccgcgtg ggcctcgttc ggggcgacgc tgtttatcgt
     1741 cggatgcagc acgctgttct cctcgctctt catctcggcc atgtcgatga gccgtccgcg
     1801 tgacggcgcg tgagcgaagc tgttctccgg tggaaccgtg ccgactggcg gtacctcgcc
     1861 gtgctcctga cggtcgcggt gggtctctgg ctacccaggc tgcgtgggcc actcgatctg
     1921 cgctacgacg ccggcgtgta ctacatcctc ggcacctcgc tcgccgaggg tcgcggttac
     1981 cgcctgctga acgagcctgg cgccatcgag gccatccagt atccgccggt ggtcccggcc
     2041 gtcggcgcgg tcttcgagcg cgccctcggc accgacgacc cggcggtggt cggccactgg
     2101 cttcggctgg gcagcgtgct gctctacgcc ggatatgccg ctgccgtgta tgtcatgagc
     2161 cgccgatggc tcacacccgg atatgcctgc ctcgttgccc tgctgtcggt ggtccacagc
     2221 cacaccattt tcctctcgga tttcttcgcc gccgacgttc cctatgcctt cctgagtacg
     2281 ctctttttcg ccgtccccgg cgggccagcg gccgggctcc tcgcggtcgg ggcctatggc
     2341 gtccgctcgg cgggcatcgt cctgctcggc gcatgggtgg gcgagagtct gatccgccgg
     2401 cggttcagcc aggcggcggt gcggagtgcg gtggcggccg cggcggtgct ggcctggatg
     2461 acgtatacgg cccacgtgaa ggcaagcccg accttctccc gcccaactta cgaataccag
     2521 cgtgccggct accagtttta caacgtggac tacgcggaga acatgtcgta tgtggacccg
     2581 ttccgccccg agctcgggcg ggtgacggga cgcaaggcaa tggatcgggt gctggagaac
     2641 ctgcgcggca tgcccatgac gctgggtgaa ggcatcagcg tgcaccgcgg ctggtggtac
     2701 ggcgaggtgg agaagctcaa ccagcggctg accggtatgc aggtccccaa atgggtggcg
     2761 gacgcggcca tgatcatgct ctgcgtgccc gtgctctgcg gtctgctgct gttggccctg
     2821 cgaggccaag tcctgctggt actctacgtc cttgggtcgc tgttcatcat cgccgtgacg
     2881 ccgtggccga tccagttcgt ccggtatctg gtccccctga ccccattcct caccctggcc
     2941 gtggtcgtgg tactcgcggc atccgcgaag cgtgcccgca ctaccggttt gcggaggtgg
     3001 cgcgcgctgg aggtcgcgct ggtcggtatg gtcgcgctca tcggagccca gcagatcgtg
     3061 actctgtacc gctcgatgag caaatacccc agccccgccg tcttcagcga ccgtgccggg
     3121 aagcggcacg agtaccagct cttcttctac gaccggagct ggcggctaca cgacgacgga
     3181 ctcgactggc tcgcccacca ggcccggccg ggcgagatcg tcgccacgtc cacgccgcac
     3241 tgggcgtatc tccggaccgg cctgcccgcc gtgatgccgc cctatgaggc ggatgctcgg
     3301 cgggccgctg tgctgctgga ccgggtgccc gtgacatacc tgatcgtcga ccagctcagc
     3361 ttcctcgatg tgggccgccg ctacacgatc ccggcgatcc aggctgcggg gaatcactgg
     3421 aagctgatct acgcggtcaa cgacagtgga ccaaagatct accgccgggt gggggacagc
     3481 gcgaagtaga cgatgaccgc accgtcccgc cgctcgtcgc ggagcaccgt ggcgttggca
     3541 cggagccact gctcctccgg cgccggctcg cctacctcgt ggatgcggat cagcgcgaca
     3601 cggtcccgac ccgcgagcag tgcagtcagg tcgtcgggca tgcggcgagc tccgagctgg
     3661 ccgacccatg ccgcgatcgg tacgtcggct tggagataac gcgcgatgcc cagcacgcca
     3721 gacggtatgg agtgcaccag gatgagatcg tcgggcctgg cccacgcgcc cacctgcgcc
     3781 gccgcttggc ggtacggctc ccacgcccgc gcgcggtggc ggaagacgtc gcgtagaccc
     3841 ggcgtccagg tggcaacgac cagtaacagg gttccgaagc cgagtccggc ggggagtgcc
     3901 ccgatggcga gggcgacgag gagcatagcg gccggcatcc cggctagcgc gtagcggctg
     3961 atcagcgagg tcgaagttcc tcggagaagg tcgaacacca cgggaccggc gcacgacgcg
     4021 atcgcccaga gccagatcag gtcgcgcccg ccacctatag ccgcctcgcg ccctcgccgg
     4081 agcagcgcaa ggccgagtgc cagcacgagc acggcgccga tggtgtcgac cgccttcacg
     4141 ccgccccaca cgccgcggcc ggagaggagg ctccagccca gggttagcgg cgaggtcacc
     4201 agcgtgccga ccggagggcg gccgtcgagc cagtagccgg tgacgcgcca ccgggcgagg
     4261 ctcgcgggca cgagctgata ccagggcgcg atgagaatca gcgtcgccag cgccgcgacg
     4321 gccaactgca cccgcgagca gcggcccggg cgaacggcca gccagagcac acacgctgcc
     4381 cagacaaagg cgtagaagta gtgggtgagg aagccggcgg cgcttgcgag cgcccagagc
     4441 gccagcgctc ccgccccttc gcgatcatgc agccggagcg tgagccacgc ggtaagcgcg
     4501 gacaggaacc agagctgcga gtacatccgc gcctccaccg agtagtacag gctgaccggc
     4561 gcgacggcga agaggacgca cgccatcagc gcctcgcgcg agccgccgag ccgatacccg
     4621 aggagccaga tcaacggcat cgtggcgagc gcccaggcaa ccgagcaggc gtggagggcg
     4681 aagtcgctgg tcccggccac gcgggtccag gccatcagcg cgagatagta gaggggcggg
     4741 ctggtgtcgg agagcagaac cgctcggatc acgggcttcg gcccggcggg cgttggttcg
     4801 tgctccaggt acctgcggaa ggtctccggg gatacggccg tcgagggctc cacgaagtcg
     4861 ccgagcgccg gcacggcggc ggacgccggg tgctccaggc tgtggccggt ggccaccgcg
     4921 agagagaaga gctcgtcggc ccacaggtcc tgtcgggcgg cgagaaacag ccgcagcacc
     4981 gcggcgacga ggatgacgag caggaccggg ccgagggccg gccggaatgt cttcacggag
     5041 gatgtctcct gatggatgca gagcgccgtg caaaataacg tcgccggaat gccccggcgc
     5101 ctgggacgcc acgacgtcgt ctgcgtgggc ggcgtgctgc tgctctggct cgccgtatgg
     5161 gcggcgcgac tggacggtcc catcgacctg cgctgggacg cgagcaccta tttcgtgctc
     5221 ggaacgtcgc tcgccgaagg aaagggctac cgcctgctca acgagccggg ggaaatcgaa
     5281 gcggtccaat accccccgct ccttccggcg ctggtggcgg cccaccagtt ggttctcggc
     5341 acgaacgact atgtgatcgt cggctcccgt ctgcggcgct gctatttcct tctgtccggg
     5401 gcctacctac tgacggccta tttcgtagtg cgtggcttcc tggatccacc gctggccctg
     5461 gcagccatcg ccggtacggg cttctccttt tacagctttc tctacccgtc ggattcgctc
     5521 tacgcggaga tcccgttcgc cctggtctcc atgctctttc tgctctgcct ccgccgccgt
     5581 gaccaaccgg gttacggcat cgtggcggga ttgctcgccg gggccgcgta tctgatccgg
     5641 acggcgggca ttgccctgct cgcggtgtgg gtcgtcgaca gcctgctgcg ccggcggttt
     5701 cggcaggcgg cgctccgagc tgcggcggca gcgcttccgg taatcgcatg gcaggcgcac
     5761 accgcgcggg tgtcggagag tgcggcttac cacgagccgg cgtatcccta ccagcgcgcg
     5821 ccgtactact actccaacgt cacctatcgg gagaacagct ggctggttga ccccttccag
     5881 ccggagcttg ggcgcacctc gccacccgac ctcgtgatgc gggtcgcacg gaatctcctc
     5941 gctctgccga ggagtatcgg cgaaagcgcc tggatcgccg tggccagcgc tccgtacctc
     6001 ctcgacaagc tgtaccgtgg gctccgcctg ccttggtccc agccgccgcg cgaggccatc
     6061 ctcgccgtga ccagtctctt gctggcgctc atcggcggag gcgccttggt gggggccgga
     6121 ctgctcctca aacggggcga gtggttgttt ccgctgtact tcggtctttc cctggcgatg
     6181 atctcgctca cgccctggcc gagccagttc tggcggtacc tcgccccgct gacgccgctg
     6241 tccctaatgt ttctgatcct ggcgctcgac gccgccgcgc gccggctcgc ccgccaggga
     6301 aagcgcggaa ggaccgcagg cgccttcgtg gccaccgctc cgctggcggc gatgctgctc
     6361 gtccaggtgg tcattgcggc cggattcctc cgcctgcttc ccatcagcta ttacgctgcg
     6421 gacgggacgg agcagccggg ccggctcctc acctacgagc cggtgtggca cgcgctcgat
     6481 cccgcgctgg agtacctccg gcggcatgcc gagtccggca aggtcatcgc gacctcggtc
     6541 ccgcacttgg cgtacctgcg cacgggacac caggccgtcc tgccaccgct cgagccggat
     6601 cccgacacgg cggcgcgcta tctcgatgcg gtgccggttt cgtttctggt cctcgacgag
     6661 ctcggcctgc cggggatctc cgagcgctat gcggcgccgg ttgtcgcccg tcatcccgca
     6721 tcctggcgtc tggtctacac cgcgcccggc agcaaagcgc gggtctacga gcgggtccgc
     6781 tgaatgagta cgtcacgctc ccgctcggcc gatgttattg cttggggcat ctgggcggcc
     6841 atgttcgccg cggcgctgct cttcgtggcg cgttacgcca gcaatgtccc ctcgtgggac
     6901 gactgggaca tggtgccgac cctcacccgg aatcagccgg tcacctggga ctggctctgg
     6961 tcgcaacata acgagcaccg ggtgcccatt ccgcgactga tcttcctcgg cctcaaccgt
     7021 ctcaccctgg tcgacatgcg ggtgaccatg tacttcgatg tggtggtcat ggcggcactg
     7081 gcggccgcga tgatgctgac cgccgcccgc ctccgaggcc ggcccgccgc tgaggacgcg
     7141 ttcttcccgc tcgtgctcct gcactgggga caggccgcca acctgctgtg gggctggcag
     7201 ctccagttct ttgcctcagt ggctctggcc tgcgtggcgc tgctgtcgat cgtgcgcgca
     7261 gggacaactg tgcccatacg gcgcgcggcg gtgacggtgg gagtctgcgt gctacttcta
     7321 ccgctttgcg gcgcgaacgg tcttggaatg gttcccgccc tggcggcgtg gccgctggcg
     7381 ctggcgctgc ttcccgagaa ttggacgggg ggtgtcaaca ctcgcggtag acacgtgatc
     7441 gcggcactcg gcgtgggggc gcttgcgctc accgcgctct atttcgtcgg ttgggagcgg
     7501 gtaccctacc acccgaagag ccagagcgtc taccagagtc tcaagacctc ggtccagttc
     7561 gccaccatcg ggctggggcc ggccactcgc gactcctggc cgctctcagg gctggccacg
     7621 ctcgcggcgc tcggggtcac gacgctgctc ctgattcggg tctggcgcga ccggccagcc
     7681 gagcgggccc gcgtggccgg cctgctctgc ttcctggcag cgctcgcgtc gctcgcgctc
     7741 ggactcggtc ttggccgcaa cggattcgag acccgctacg tcaccttggc cttgccggcc
     7801 tggtgcgcgc tctacttcgc ctggcttctc tacggcgatc gggcacgccg gtgggctcca
     7861 gccgcactca cgcttgcgtc gctcgcggca ttatggggga acactgtgtt cgggttggac
     7921 tacgcgcggg agctgcgggc acagctcggc gggttcgaac gcgacctggc cgccggggtt
     7981 ccgctgcacc acctgcttca ccgatacgga ccctggctgc atccacacca ggacatgccc
     8041 cggcgctacc tgccgatgct aaaacaggcg cgggtcggta actacacggc gctccaactg
     8101 gaccccgcct ttcgggtaat cccgctcgac ctgcacccgg tggagactac gctgctcgcc
     8161 tggcacgaca gcaccgcgcg ggtcttggga ccacggccgg cgctgctgtt ccggctaccc
     8221 ggcgaccgcg tcgtgcaggg tatccgtctc aggtatcgct accggagtga cgacggcacg
     8281 ctgccctaca tcggtatccg ctggaagccg ggttcccaga ccgagttcgc gccagaacgg
     8341 ttctacaagt actcgcccac tggcgaccgc gccaattggg agcgcggaac ctgggacagc
     8401 atccacgaca ccgcgacgac gctcacggtc tggatctccg acacgataag ggaggtcggc
     8461 atcacgcctg actttcggcc ggcggtcttc aagatcgatg agctctcgct gctggtaccg
     8521 aaggattagg atggcctcac cgtcggtggt tgtgctcggt ggggggctgt ccggcgtcgc
     8581 ggcagcgtac acgttggcgc ggagcggcat cagcgacgtg accgtggtgg agcgcggcga
     8641 cacgctcggc gggctggccg ggagcttcga gcgggaaggt cacttctatc ccctgggcta
     8701 ccatcacatt cttcaccggg accgaacgct gctttacttc ctcgatttga tcggcgcctt
     8761 gccccgggtc gtctggcggc ggatccggat gctgttccat ctcgggggca agacctacga
     8821 tctggggagc ccgggcggat tcctgcgctt ccccatgccg cccgctgaca aggcgcggtt
     8881 cgtgcgcctc atgctcaagg ccttcggtaa gcgcgactgg tcggactggc aggaccggag
     8941 cgccgcagag ctgatcgatc attatgccgg ccccggcgtg cgagaggtgc tgttcgagcg
     9001 gctgacccga ctcaagttcg aactgccctg cgccgaggtc agcggcgcct ggctcggcgc
     9061 gcgcctccat taccgcgagg gatcggcgcc tctcggatac attgcccatg cgaactggac
     9121 caaggtgctg tgcgacgggg tgactcggct cctggaggag gccggcgtcg ggatccggac
     9181 tcaggcgcgg gttgcccgac tgcacacagc aggcaaccgg gtgatcgagg ccgaattgga
     9241 gagcggcgag cggatccgag gcgacatctt cgtcagcacc gtaccgacgg agatttacct
     9301 ccggctgctg ccgggcgaca ccactccgca gctggccagc atccgttata gcgcgttgat
     9361 ctccgtgatc tgtgcgactc ggcaggtggt ccggccggag gcctactgga tcaacctggc
     9421 ctcgatggac cgcaccgcgg gagccatctt cctgctcagc gccctgaatc ctaccatcgg
     9481 ccggccggga gatacctgcg tcaacttcgt cacccacctc cgaggtcgcg accggtcgct
     9541 cttcagggag gacgatgagc acctgatagc gaagtatgcc gaggactttc gcgaggtctt
     9601 tgggttcgag ctggagccgt tctggaccca tgtcgcgcgg gtgccgatgt attcaccggt
     9661 gttcgatcgt ggctttcgca atccaccgat caccagcgcc tcatgggaga acgtgtactt
     9721 tgccgggaac taccgcacct ttccctcgat cgtatccacc ggcaccgccc ttggctcagg
     9781 ggtagctacg ggcagcgccg tactcgacgc cctgggtcag tcgacagact tgccggatgc
     9841 cgtcgccaac tttcgcctgc ggtcgatgcc tcgtgcctga accgattggt ggaaccgaga
     9901 gcccaatgac cacacttgat ttccgcccga cggtgaagtc gcaactcctg gccgttcccc
     9961 aggcgctgcg ggcacatcag tgggtgaaga atctgctcgt cttcgtgccg gtactgctgg
    10021 atcataaaat ctttgacccc ctggtgcttt ccaaggcgat ggtggccttc gcagcgttct
    10081 gctttgccgc ctccggcgcc tatgtcctca acgatctgct cgatggcgat gccgatcgcc
    10141 gccaccggac caagcgcaat cgcccctttg ccgcggaaac cctgagccgc tccttcgggt
    10201 tctcgatggt gccgctcctc ttcacggcgg cgctgctctg ctcgctttgg ctctcgccga
    10261 agttcctgat cttgctggtg acctacgtcg tactgaccac cgcgtactcg atctacctca
    10321 agcggatcgc gattctcgac gtattgcttc tcgcaggtct ctataccctc cgggtgctgg
    10381 ccggcgtcgc ggcgagccat gtccggttct cgacctggct tctggccttt tcgatgtttt
    10441 tgttcctgag tcttgcgttc ctcaagcgct acgctgagct gagtgacctg cagggtggtg
    10501 ccactgaggc cctcgagcgg cgcgggtacc tccgcggcga tcgcgagtgg ctcgggtcta
    10561 tgggtggggc cagcggttac ttggcagtcc tggtgctcgc gctctacatc aacagcgagc
    10621 aggtcatggc gctctaccgc aggccgctgg tgctctggct gatctgtccc ctgctgctgt
    10681 tctggatcag ccggatgtgg ctgctggccc atcgcggccg catcgaccag gacccgatcg
    10741 tggccaccgt gcgcgacccg gccagctacg tcatcggggc tctggtggcg cttgtcctct
    10801 acaccgccgc ataacagggg acaccccgga gatgcgcacg taccagtcgt gggggcgcta
    10861 tccccgcacc cagcataccc gcgtgctgcc ggtgttctgg cgctcggagc cgcccgccct
    10921 gggagacatt accgagagcg tattgccctt cgcctgcggc cgcagctacg gtgacagctg
    10981 cctcaatgac ggcggcgccc tggtcgacgt caccggcctc cggcgcttca tcgccttcga
    11041 cgaaccccag gcgctccttc gctgcgaggc gggcgtcacc ctggcggagg tgctcagcct
    11101 ggtggcgccg cgcggctggt ttgttccggt gcttcccggt acccaatggg tctccgtggg
    11161 cggagcgata gccaacgata tccacggcaa gaaccaccac cgggccggca ccttcggggc
    11221 ccatgtgacc tgcctcgagc tcctgcgctc caccggcgag cgggtgctct gctctcccga
    11281 gcgaaatgcc gatctcttcc gcgccaccat cggcggactc ggcctgactg gactgattct
    11341 ctgggcggag atccggctca agcaggttgc tgggtcggcg atcgccatgg agcggatccg
    11401 gtttgcctgt ctggaagagt tcctggacct ctccaacagc gaccaggcgt acgagtacac
    11461 cgttgcctgg gtggactgtc tggcgcaggg gcgacgactg ggacgagggc tctatctgag
    11521 gggcgaccac gcgtcccgat cggttacacc cagtgaaccc catgccgctc gcctgaaggt
    11581 accgatcgat ctgccctcgg gcctcatcaa ccgcgcaacc ctggccctct tcaacgcgtg
    11641 ttactatcga agccagctcc gggcgaagct ccgcaagacc gtgcattacg agcaattctt
    11701 cttcccgctc gaccggatcg gagcgtggaa tcggctctat ggccggagcg gcttttttca
    11761 gtaccagtgc gtggttcccg atgacctcgg ccgaaccatt gcgacgctgc tggcgcaggt
    11821 agcgcgatcc agcgagacgc cggcactcgc ggtcctcaag cggttcggca cgatccagtc
    11881 accggggctt ctgtcctttc cccggcccgg aattaccctg gcgatagact tcgccaatcg
    11941 gggaccggcc acgctcgctt tgctggagca gctcgatcgc ctggttgtgg atgcgggggg
    12001 tgccgtctac ccggccaagg acgcccgtat gagtcccgcc agcttccggc gctttttccc
    12061 cgcctgggaa acgttcgcat cccacgtcga ccccaagttc tcctcttcct tctggcggcg
    12121 tgtcaccgct gcctgacgtg acggcatgag agtgctgatc gtcggagcga cgtcggccat
    12181 cgccggtgag acggccaaga ggtacgccga ggatggcggc cggcttttcc tgaccggccg
    12241 tgacgccgcc aggctcgcct cggtccggga tgatctcctg gtccggggcg cggctcaggt
    12301 cgagacagcg gagatggatg tcgcccgaat cccgggtcat cgccaagtca tcgactcaac
    12361 catcgcagcc ctgggcgggc tggacgtggc gctgattgcc cacgggaccc tgccggacca
    12421 gggactctgc caacagaacg tgagcgagac gctggacgcc atacaggtga atttcaccgc
    12481 aaccgtcgcc ctgttgacgc tgctcgccaa ttacttcgaa gcccagcgca acggctgcat
    12541 cgcggtgatc acatccgtgg cgggagaccg tggccggcag agcaactatg tctacggcgc
    12601 ggccaagggg ggagtggacc gatttctcca ggggttgcgc aaccggctct tccgctccgg
    12661 ggtagcggtg gtgaccatta agcccggctt cgtcgagacg ccgatgacgg ccgggatgaa
    12721 gaagggtctg cttttcgcca gtgctcgccg ggtcgggcgc ggcattcacc gtgcaatcga
    12781 gcgccggcgg agcgtcgtct acataccatg gttctggagg ccgatcatgg tagtggtgag
    12841 gagcctaccg gaaggtcttt tcaagcgcct tcggctctag gattcacatg cgcagatgct
    12901 tcccgatttg gattcccctc tgctttttcg cggtgggagc cgccgcccag cagccatccc
    12961 cggccactgt gagcggggcc cgggttgccc gggccgtcga tccgaatgtc cttcgcgctc
    13021 acctcgagtt cctggccgac gatgcgctgg aaggccggag gccgggcacc cgcggagggg
    13081 acctggcggc caagtacatc gcggctcagt tcgccaggct cgggctccag cccgcaggcg
    13141 acagcggcac ctactaccat cacgtaccga tcatcaccct cactcctcag ccgaccgtga
    13201 aggtgggtgg cgccccgacc gaccttgcgt atcgcaccga ctacgtcctc tggtctatgc
    13261 gcaacgactc gacggtcaat gccaagggtg atcttgtttt cgtcgggtac ggcatcatgg
    13321 caccggaata cgactggaac gactacgagg gcgtagacgt caagaacaag atcgttgtgg
    13381 cgctggtgaa cgatcccggg ctgcgcgatt cgacgatctt tcgaggaccg atcctcacct
    13441 actatgggcg ctggacctac aagatcgaag aagcgcaacg tcagggtgct gccggcatcc
    13501 ttctggtcca cacgaccgaa agcgccacct acccgtggag cacggtacag tcgagctgga
    13561 ccggacccca ggtccggatc gaagagccac ccaagtccct cctcatagcc gggtggctga
    13621 accaggatgc agcggcaagg ctcttccgcc tgggcggcca ggacctctcg agcctgatgg
    13681 accaggcagc ccatcgcggg ttcagaccag tgccccttgg gctccagctc gacgccaccg
    13741 tgcggagcga catccgccgt tccgagacca gcaacgtgct cgctcggtgg cccggccggg
    13801 gaccactggc gcgtcaggcg gtgctgattg ggggacacta cgaccacttc gggatcggcg
    13861 cgccggtgga cggcgactcg atctacaatg gcgccgaaga caatgcctcg gggaccgccg
    13921 cggtgctggc cgctgccgag gccttcgtca ggagcggcgt gcggaccggc cggtcgatcg
    13981 ttttcatcgg gttcaccgcg gaggaggccg ggttgctcgg atcccaggcc ctcgtcgcca
    14041 agccaaccat accgctgagc cgcatcgccg cgatcctgaa cctcgacgtg atgaatctgt
    14101 atgggcgcac tcgtgacgtc tcggcccttg ggctggatca gtcctccctc ggcgccgtgt
    14161 tcaccagcgc ggcaagggca gaggggctca aggtcaccgt aaaccgtgac gccctgcttc
    14221 gtgggtccta cttcagatcg gatcacttcc cctttgccaa ggcgggggtg cctgggacgt
    14281 ccatcgagaa tggggagcag tacgttggcc aggctgccga ctacggcagc aagcggaagc
    14341 gcgagtacac cgagaagcgg tatcaccagc ccagtgacga gctgctccct tggttcagct
    14401 acgatggcgc cgtgcaacag cttcgagcca tcgtccgtac agcagtggca gtcgcgaacg
    14461 cacccagtca gccgacgtgg aacaggaact cggagttccg gcaggcgggc gagctacgat
    14521 tagggcggga atgacgggaa aatcgggaag gtcgggaagg ccgaaccttc gaacttcctt
    14581 cccggccttc ccggcgttcc cgtccttccc gtccttcccg ccttccacta tcttctcccg
    14641 ccgcccgcgc ctgccccttg atccaccgga gcccttctgg acctgccttc cgagcaccgg
    14701 attccgctga catggctgct cgagaacgcc ggggcgccca tacggtatcg tacctaccgc
    14761 gagttggcgc ctgagggcta cgcatccccc gaggttgtcg aggccgccca gcgcgccatt
    14821 ctggagtcca aggcagccct cgccgtcgtg aagaaacaga aggacactgg cgtctggggt
    14881 gggaacctgc ttggcttggc cacgtccgcc gcccagggcg tcaaggatac cggtaccatc
    14941 ccccaatacc ggcggcttct ccaactcgag tggccgcgat cgggtcgccc cttcaagctc
    15001 gccgaccgcg tcctcttccg tctcctctcg cgcgacgagg acccttcact cctgttcgag
    15061 ttccagaaga gcgtcaagtc cgaccccgag gctgaagcct gggcccgcgg gatcatgcgg
    15121 gaagcgtcct ccgccgcctt ggccgaggcg ggatacgccg atgatccccg ccttcggggt
    15181 gcagggcaca agattgccag cgccatctcc caatttcttc ggagccctct ggcggagaag
    15241 ccgttcgtta aggcgggcaa gcagatcgtt ttgcatccag aagcccatcc gccgagctgg
    15301 tattctgtcg cgatgctggc ttctatgccg aatctccaac gggagcgggc cggctttacc
    15361 gagcggctgg gccactacct tgcgcagcca gcgccgaaga aggcattcgt gatccaggtc
    15421 ggcaagaaga ccgttcgacc tcagcacctc atcctgggcg aaccgatcga ggctgacgca
    15481 aagggacaag ccaaagacat ccccttggca ttgcattaca tagagctgct cgccaggatg
    15541 ggtgccctgg agtgggcgcc ggtagcgacg aaggtcctgg ctcggctgct caaggattgc
    15601 gacgaccagg gagtctggcg ccccaagaac cttcgctcgt tgcccaagca gggtaataag
    15661 atcacgtacc actactaccc gcttcacatc gattcaaaga caaccgaggg aaaagagatg
    15721 gacattacct ttcgtctggc ggtcatcgcc aaggtgctcg gctggtccct cagctattcc
    15781 tgaagcgtct tgcgattgaa tgggtagcat gtcatactac taccagtgcc tcgcatcgat
    15841 ctcactcact tcggatttac cccgaccgag agtctggtct atgaggtcct cctgacgagt
    15901 ggacccggga ccggttacgc gatagcgcgg gcggctggtc tggcgcgggc caacgcctac
    15961 agcgcgctcg aagggctcgt agccaaggga gctgcgcggg cagagggagg gcgcccccga
    16021 cagtaccgcc ccgaggcacc ggcaggcctc atcgcccgca tcgcgcataa ccacggcctt
    16081 gcgctcgatc ggctcaccac cgacctcgag acgatagccg tcccgagcac gcctacggtg
    16141 gtggagatcg attcgggccg agccgtcctg cagctgatca ctcatgatgt cgctcgagcc
    16201 agccggtcgg tgggcctgct ggtaccaccc gacgcgtttc ctcttctcgc ccctgctttg
    16261 cgtcgtcccg tttcagcggg gttgccggtc tcgctctggt ccaccgggcc ggtcgagctc
    16321 gggttcgctc cggtcgagct cgtgtctggg gatcacggct ggcctggcat gccgatcatc
    16381 gcggtggtgg acgaccgcag cgcgatcgta ggctttcggc agggcaacga ggtccgcggc
    16441 cactggagca ctgcgccggc ctttgtcgcc gccgcgcggc tggccctgga gcggttcggt
    16501 gcgccaaatg ggtgatccgc tccatagcgc ttttctggag cttcagcgag gatacctcgc
    16561 ctccatgccg gcgcggctgg aggagctgcg ttccgacctt gccaccatgc gcgagggtag
    16621 caccgaggcc gccggctcac tgaaggcgcg tctccatcga cttgccggat ccggcggctc
    16681 cttcggcttt ctggatctca gcgccattgc ccgggaagcc gaacattacc tcgcctccaa
    16741 ccctgggttg caggattcca gcggactggc tcccatgctc gaccggctgg aggaagcggt
    16801 ccggcgcgca gataggcagc tcgacacccc ggtcgcgggc atgcctccag acgtggtccc
    16861 tcgtgctctg ctcgtcatgc ggccaagccc gcagcgcgag aggattgcgc aggagctgcg
    16921 gaacgcggga tacgaggttc gactgggcag ccggcaggat gaccccgcgg cgacaccgtt
    16981 cgaggaattt ccccacctcc tggtgatcgg aggcgaggcg ggcgatggcg acccctccgc
    17041 cgtagcgtca gcctggacca ataacccgag caggcggccc ggagcggtcg tgttggtgga
    17101 gactcttcga ggcgtagacc gcctccgcgc catcgccgcg ggcgtggatg ctgtatttcc
    17161 ggccgaacag gtggagcaga agcttgcccg ctacgcccgc accttcgccc ggatcggccc
    17221 cccgccatcg aacgtgctgc tggtggatca cgatgcggtg ctcgcagccc ggattgtccc
    17281 cgccctggag cacgccaatg tccgcgtggc ccgctgtctg ccgacccagg ctgttcacga
    17341 cctgctcgag cgtgagatgc cggacctctt gctgctccac actcgcctgg tcgggtcgga
    17401 tgccttcgcg ctcgcgcgca tgatacggca agactcccgc taccatctgc ttcctgtcgt
    17461 cttcatcggg gacgacaccg acgccgatcg cgtagccgcc ctcagagccg gcgcggacga
    17521 ctttctttcg gtggctgctg aggctgagct tctggcgcag accgtcgtta cccgcgcggc
    17581 ccgtggtcgg cggctacggg agatggtcca tcgtgacggc ctcaccgggc tcctcaacca
    17641 tgccaccctg atggcggagc tggagaatgc ggttgattac agccagcgcc acggtgagcc
    17701 gcttgcattc gtgctcttcg agctcgaggg tttccgcaag ctgagcgaac gactggggcc
    17761 acgggcgggg gacgaggtcc tcctccacgt agcctcagta tttcgatcca acgtccgagc
    17821 aagtgatgtg atcggccggt acgggtggga ggcgttcggc atgcttctgc ggggcgccag
    17881 tgcatccggt gccgcggtcc tcgctgagaa gctgcatcgg gtgctcggtg agcaaccggc
    17941 tcataccaca gccagcgagg tggtctctct tcaggtgaag gtcggatcgg ctgtatttcc
    18001 ccgcgatggc acgaccgcgg ccgagctgac ccaggcggcg gatagagcgc ttcgaagtaa
    18061 gaggtgagag gtgagaggt
//
LOCUS       DASYRV010000633         2287 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2874510, whole genome shotgun sequence.
ACCESSION   DASYRV010000633 DASYRV010000000
VERSION     DASYRV010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2287
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2874510"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..379
                     /locus_tag="VGQ24_16730"
     CDS             <1..379
                     /locus_tag="VGQ24_16730"
                     /inference="COORDINATES: protein motif:HMM:NF024886.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phage integrase N-terminal SAM-like
                     domain-containing protein"
                     /protein_id="HEV8456541.1"
                     /translation="ATTITDYLDWHALCGSSKRHRQDIRRMLLRFAGVTGNERPLDEV
                     THDDCTSFLHSIQEQDCKPNTLKAYHRVLDAFFNWCVEEERRELSPMKRVPNPLRQPL
                     LPAPSCSPRRPSRRRSSSLASSS"
     gene            complement(443..1693)
                     /locus_tag="VGQ24_16735"
     CDS             complement(443..1693)
                     /locus_tag="VGQ24_16735"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEV8456542.1"
                     /translation="MNGKLLSWTQQMAEAAVMPGDPPEARLRKAVLIFMACFCTLAGL
                     LWGTAYMLLGFPAPALIPFGYSTIVGCSLVSFLLTKRFVVFRFTQLALILCLPFLMQW
                     SLGGFVASSAVILWALLAPIGALMFHGSRQAVPWFAAYLLLLLICGIADRSLAATAAP
                     VPPLAIRVFFVMNLAGVSILVFWMMHYFVGELQKEQERSEELLLNILPGPIVDRLKRE
                     QGIIADGFAEATVLFADIVDFTHFCTRKSPEELVETLNRIFTLFDQLAERHGLEKIKT
                     IGDAYMVVAGVPTPRSDHVEAVAEMALDMQEALERFEANGGTPFRMRMGINTGPVVAG
                     VIGLRKFIYDLWGDAVNTASRMESLGLAGAIQVSAATYEQLRGKYEFEERGVVHVKGK
                     GEMVTYLLRGRAPCVETSGLTPRS"
     gene            complement(1690..1887)
                     /locus_tag="VGQ24_16740"
     CDS             complement(1690..1887)
                     /locus_tag="VGQ24_16740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456543.1"
                     /translation="MSDLVRMLTSLIAPETLAALVDANYDLGTPVRCKLISHNDNDPY
                     LLTAVIWPGNACLAGHGGGKL"
     gene            complement(2040..>2287)
                     /locus_tag="VGQ24_16745"
     CDS             complement(2040..>2287)
                     /locus_tag="VGQ24_16745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456544.1"
                     /translation="GSSGRFEPLLTAGQVQPLPRSLRRKKEKLGVSLRAELAVRVALA
                     VSFTVTTVCCAGSSICARPAKGFPGTRTNLIPKRPSR"
BASE COUNT          459 a          726 c          710 g          392 t
ORIGIN      
        1 cgctaccaca atcaccgact acctcgactg gcatgcgctc tgcggctcgt ccaagcgcca
       61 ccgccaggac atccggagga tgctcctccg ctttgcggga gtgacaggaa acgaacgccc
      121 gctcgatgaa gtgacacacg acgactgcac aagcttcttg cacagcattc aagagcagga
      181 ttgtaagccg aacaccctga aagcctacca ccgggttctc gatgcgttct tcaactggtg
      241 tgtcgaggaa gaacggcgcg aactctcgcc gatgaagcgg gtgccgaacc ctctacgtca
      301 accgctgctt cctgccccga gttgcagccc tcgccggcca agcaggcggc gctcgtcctc
      361 gctggcctct tcttcctgac caggttcgcc ctcgtcgtcc acgagcagat ctggccgctg
      421 cttggcagct gctgagcgag cttcaggaac gcggggtgag gcctgacgtc tcgacgcacg
      481 gggcccgccc tcggagcagg taggtgacca tttcgccctt gcctttcaca tggacgacgc
      541 cgcgctcctc gaactcatac tttccccgca actgctcgta ggttgcggcg ctgacctgga
      601 ttgcgcctgc cagtccgagg gactccatgc ggctcgccgt gttgacggca tcgccccaca
      661 gatcatagat gaatttcctc aggccgatga cgccggcgac caccgggcca gtgttgatcc
      721 ccatccgcat tcggaacggc gtgccgccat tggcctcgaa ccgctccagg gcttcttgca
      781 tatcgagggc catttccgcg accgcctcga cgtgatccga ccgcggtgtc ggcacccccg
      841 cgaccaccat atacgcatcg ccgatcgtct tgatcttctc cagcccgtgt cgctcggcca
      901 gttgatcgaa gagggtgaag atccggttga gcgtctccac cagctcctcg ggcgacttgc
      961 gggtgcaaaa gtgggtgaaa tcgacgatat cggcgaagag caccgtcgcc tcggcgaacc
     1021 cgtccgcaat gatgccctgc tcccgcttca gtcggtcgac gatcggtccc ggtagaatgt
     1081 tgagcagcag ctcctccgac cgctcctgct ccttctgaag ctcaccgacg aagtaatgca
     1141 tcatccagaa gaccaggatg gacacgccgg cgagattcat cacgaagaag acgcgaatag
     1201 cgagaggggg aacgggtgcc gctgttgccg cgagggatcg atcggcaatc ccgcaaatca
     1261 gcaggaggag cagataggcg gcaaaccagg gcaccgcctg ccggctgccg tggaacatga
     1321 gcgcgccgat cggcgccagg agagcccaga ggatcacggc gctggaagcg acgaagcccc
     1381 ccagactcca ttgcatcagg aacggaaggc agaggatcaa cgcgagctgc gtgaaccgga
     1441 agacgacaaa tcgcttcgtg agcaggaaag agacgaggct acatcccaca atggtggagt
     1501 atccaaacgg gatcagggcc ggcgcgggga agccaaggag catgtaggcg gtaccccaga
     1561 ggagcccggc gagggtgcag aagcacgcca tgaagatgag aacggcctta cggagccgcg
     1621 cctctggggg gtcccccggc atcaccgcgg cttcggccat ctgttgggtc cagctcagga
     1681 gcttcccgtt cacagtttgc caccaccgtg gcccgccagg caggcgttgc cgggccagat
     1741 aacggcggtc agcaggtaag gatcattgtc gttgtggctg atgagcttgc accggacggg
     1801 agttccgaga tcgtagttgg catccacgag agcggcgagc gtctcgggcg cgatcagcga
     1861 ggtcaacatc ctcacgagat cggacatctg cgtcgaatct cctgtctcca ccgccgcgca
     1921 gagcgccgcc ggcgatgtag aagcttcccg tggcttcgat actcatccga tgggctctcc
     1981 agagggaggt tcgggggagc ttggatctcc tctccagaac tctggacgag aggcctcggt
     2041 caccgggatg gtctcttggg aatcaggttg gtccgagtgc cagggaatcc cttggcgggc
     2101 ctggcgcaga tggaggagcc agcgcagcac acggtggtca cggtgaacga gaccgccagc
     2161 gccacacgca cggcaagctc ggcccgcagg gaaacgccca atttctcttt ctttctacgg
     2221 agacttcgag gcagtggctg tacctgacct gcagtgagca gcggttcgaa ccgacccgaa
     2281 gagccgt
//
LOCUS       DASYRV010000634         6240 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3928057, whole genome shotgun sequence.
ACCESSION   DASYRV010000634 DASYRV010000000
VERSION     DASYRV010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6240
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3928057"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1370
                     /locus_tag="VGQ24_16750"
     CDS             <1..1370
                     /locus_tag="VGQ24_16750"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8456545.1"
                     /translation="NNVLDLSKVEAGHMELALSEFDIRNTLGEVRTIVGTLAMKKHLG
                     LELEVEDSVTTLMADQSKFKQILYNLLSNAIKFTPEGGSVGVTVRRAPEVGHREGGEW
                     IEVAVSDTGIGLRPEDRERIFGTFEQVDSAYAREQQGTGLGLALSKRFVELHGGWIWA
                     ESEFGSGSVFRFVLPLVANAVTSDVATDTGGAPSAAQGNGPLVLVVEDDKEAGELLAR
                     DLAQAGYQVARAATGQQAVALAQKLRPDAITLDVLLPDQDGLKVLAQLKALPETRAIP
                     VVIVSLTEGRELGFSLGAVDWLVKPANPVNFLAAVHKAIVGTDSGEAQTVLVVDDEPP
                     TVELLTDMLKTQGLRVLAAHDGRRGIALARAERPGLIVLDLIMPELTGFDVVQELRRH
                     PETREIPILIFTVKDLSAEEREQLRGSVQAVVTKGATGNLLRELARVQATNGRKGGMA
                     PEELG"
     gene            1367..1750
                     /locus_tag="VGQ24_16755"
     CDS             1367..1750
                     /locus_tag="VGQ24_16755"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEV8456546.1"
                     /translation="MSTRHATILIVEDNALNLELATDLLVAAGYTIRQARTGEEGVRL
                     ALAEAPDLILMDLRLPGMDGYAALRRLRADPRTAHVPTVALTAQAMRGDQEAVLAAGF
                     DDYISKPIDTRTFSQAVGRVLGSAA"
     gene            complement(1753..4131)
                     /locus_tag="VGQ24_16760"
     CDS             complement(1753..4131)
                     /locus_tag="VGQ24_16760"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HEV8456547.1"
                     /translation="MATHTLVAQASPIAPTNAERILSGRDTPSHDYDLIHQRIEVANF
                     DWDATAFDGKVTTTVVSLRPGLDSIVMDMGRRLVVRRVAGTCKPKSLPRATRGGAPCA
                     PLPFRRQGDSLVIRLAKPAGFRDTLRFTVDYRGKITQGRGLYFFKAEPGRPHRPQQIY
                     SGGGTDGNPNWIPTYAAPHDKATWELLATVPAAYTVVSNGRLVADRPGGRGRERTHTV
                     HWTQERPASTYLISIVVAPLKKVTDRWRDVPLEYYVYPEDVPLARRLFGVTPDIMEVY
                     TRLTGVKYPWPRYAQTTVTDFVGGMENVGATTLVDWLPDASAYRDRPWYQHTLIPHEL
                     AHQWFGNLVTTENWANYWLNEGTAEFMAGQYRGSKLGRSAEDEFYLDEYRQYLSLDVR
                     RRVPLASFNSNNVYAKGALVLEMLKKQLGRERFWAAINRYLTRHAFGNATSDGLRRAV
                     LDATGLNLDWFWSQWVYQAGHPDFVVTAAYDSAGGSLALTVRQTQVDTARADSSGFRF
                     TTPLVFRGAVSIRVGTSRGDLRKQVELDRREQLIRISGVKSPPTMVVFDENNAMLKSL
                     TFEQPTRWLAAQLTRDPDLWNRGWVIEQLGRRNGDSLAAAALATAARGADYYLTRALA
                     AAALGGFPEPVAVPPLEAAARDTSSAVREAAIAALGDVGGERAVAAARTAWKGDSSYE
                     VRASALTALARLDSTGAKGAVLAGLAMPSYRNVIQNAAIAAAAESPDSAMIDGLEKLL
                     GQQRLPAVVLADLASKGDTRALTALVRHKDDKRVWVRRWVQEAIEQELEKTP"
     gene            complement(4257..4934)
                     /locus_tag="VGQ24_16765"
     CDS             complement(4257..4934)
                     /locus_tag="VGQ24_16765"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: protein motif:HMM:NF000595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEV8456548.1"
                     /translation="MTPRPTLTRERAVWAEEQLLVGVDEAGRGPLAGPVVAAAVVFPR
                     GCSAVRGLRDSKILPASVRARLAERIRCRVIAFGIGAASAHEIDRYNIRVASAIAMRR
                     AIARLIRRSTLAPYPMGQGCGACEAGQRYRIIIDGLPLPEIGYAHDALIDGDARCQSI
                     SAAAILAKTIRDALMHRLATRHPGYGWHTNVGYGTEEHQEGLQALGPTRHHRLTFAPL
                     AQLTLSL"
     gene            complement(4938..5285)
                     /gene="rplS"
                     /locus_tag="VGQ24_16770"
     CDS             complement(4938..5285)
                     /gene="rplS"
                     /locus_tag="VGQ24_16770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010334229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEV8456549.1"
                     /translation="MERLAEVAREGLRTDIPAFEPGDTVRVMVRVREGDKERLQAFEG
                     MVIAKRGGGISETFTVRKISAGVGVERLFPLHSPTIASVELVRRGRVRRAKLYYLRAL
                     SGKAARIREKRES"
     gene            complement(5459..6151)
                     /gene="trmD"
                     /locus_tag="VGQ24_16775"
     CDS             complement(5459..6151)
                     /gene="trmD"
                     /locus_tag="VGQ24_16775"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: protein motif:HMM:TIGR00088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEV8456550.1"
                     /translation="MLTIDVVTLFPEVIAPYLGASIPARAAAAGLVRFRLVQLRDFTH
                     DRHATVDDYAYGGGAGMVLKPEPFFEAVETLRPTGPILLLSARGRRFTHDDAVRFSLG
                     ERLTLLCGHYKDVDQRVADGLATEEISVGDFVLSGGEPAALCVLDAVVRLLPGAMSDH
                     ESASSDSHYDGLLSPPSYTRPPAYRGLEVPEVLRSGNHAEIEAWRQAESERLTKERRP
                     DLWDRYNESSRA"
BASE COUNT         1067 a         2046 c         2073 g         1054 t
ORIGIN      
        1 tcaacaacgt ccttgacctc tcgaaggtcg aagccggcca catggagctg gcgctctctg
       61 aattcgacat tcggaacacg ctgggtgagg tgcggaccat cgtggggacg ctcgcaatga
      121 agaagcacct gggtctcgag ctcgaggtgg aggactcggt caccacgctc atggccgatc
      181 agtccaagtt caagcaaatc ctctataacc tcttgagtaa cgcgatcaag tttacgccgg
      241 agggtggctc tgttggggtc acggtgcgcc gggcaccaga agtcggacat agagaaggcg
      301 gcgagtggat cgaggtcgcc gtcagcgaca ccggtatcgg gctgaggcca gaggaccggg
      361 agcgcatctt cggaacgttc gagcaggtcg attcggcata tgccagggag cagcagggta
      421 cagggctggg gttagcgttg tcgaagaggt tcgtggaact gcacggcggt tggatctggg
      481 cggagagcga attcggcagt ggcagcgtgt tccgttttgt cttgccgctc gtggccaacg
      541 cagtcacctc cgacgtcgcc accgacacgg ggggagcccc ctcagccgcc cagggaaacg
      601 gtcctcttgt gctggtcgta gaggacgaca aggaggctgg agagctgctg gcccgtgatc
      661 tggctcaagc gggttaccag gtagcgcgcg ccgcgaccgg acagcaggcg gtggccctgg
      721 cccaaaaact ccggcccgat gccatcactc tcgatgtcct gctcccggac caggacggtc
      781 tcaaggtcct cgcacagtta aaggcacttc cggaaactcg agcaattccg gtcgtaattg
      841 tgtccctcac cgaaggtcgg gaactgggct tcagcctcgg cgccgtagac tggctggtca
      901 agcccgcaaa tccagtcaac ttcctggcgg ccgtccacaa ggctattgtc ggcaccgatt
      961 cgggtgaggc ccagacagtg ctcgtcgttg atgatgagcc cccaaccgtc gagctcctga
     1021 ccgatatgct caagacgcag gggttgcggg tgctcgcggc ccatgatggg cggcgcggga
     1081 ttgccctggc gcgggccgaa cggccgggcc tgatcgtgct ggatctcatc atgccggagc
     1141 tgaccggctt cgacgtcgta caggagctcc ggagacaccc cgagacgcgg gagattccga
     1201 ttctcatctt tacggtgaag gacctgagcg cagaggagcg cgagcaactc aggggaagcg
     1261 tacaggcggt ggtgactaaa ggggccaccg ggaacctgct tcgcgagctt gcgcgagtgc
     1321 aggcaaccaa cggtcgaaag ggtggtatgg cgccggagga gctggggtga gcacacgaca
     1381 cgcgacgatc ctgatcgtcg aagacaatgc cttgaacctc gaacttgcca ctgacttgct
     1441 ggtggccgcc ggctatacca tccgccaggc tcgcaccggt gaagaggggg tgcgcctggc
     1501 cctggcggag gctcccgacc tcatactcat ggacctgcga ctgccgggca tggacggcta
     1561 cgccgccctc cgccggctca gggcggatcc gcgaacggcg catgtcccta ctgtggcgtt
     1621 aacggcccag gcgatgagag gggaccagga agcagtactg gccgcgggat tcgacgacta
     1681 catctccaag ccgatcgaca cgcgcacgtt ctcgcaagcc gtgggacgcg tgctcggttc
     1741 ggcggcatga acctacggcg tcttctccag ctcctgctcg atcgcctcct gcacccagcg
     1801 ccgcacccac acgcgtttgt cgtctttgtg ccgcaccagc gccgtgagcg ctctcgtatc
     1861 gcccttggac gccagatccg ccagcaccac cgccggcagc cgctgctggc ccagaagctt
     1921 ctccagccca tcgatcatcg ctgaatcggg cgactcagcc gccgcggcaa tggccgcatt
     1981 ctggatgaca ttgcggtagg acggcatggc aagcccggcc aggaccgctc ccttggcacc
     2041 ggtggagtcg agccgtgcca gcgcggtcag cgcgctcgcc cggacctcat agctcgagtc
     2101 gcccttccac gccgtccggg ctgccgccac ggcccgttcc ccaccgacat cgccaagtgc
     2161 ggctatcgcc gcctctcgta ccgccgatga ggtgtcccgc gccgctgcct cgagcggtgg
     2221 gacggcgacg ggctcgggga agccccccag cgccgccgcg gccagggcgc gggtgaggta
     2281 atagtccgca ccgcgggccg ctgttgcgag cgcggccgcc gccagggaat ccccgttgcg
     2341 ccggccaagc tgctcgatga cccagccgcg attccagaga tccggatcgc gcgtcagctg
     2401 cgcggcaagc catcgagtcg gctgctcgaa cgtaagcgac ttcagcatgg cgttgttctc
     2461 gtcgaacacg accatggtcg gcggcgactt taccccggag atgcggatca gctgctcccg
     2521 ccggtcgagc tccacctgct tccgcaggtc tcccctcgag gttcctaccc gaatggaaac
     2581 ggctccgcga aacacgagtg gcgtggtaaa ccggaagccg ctcgaatcgg cgcgcgcggt
     2641 gtccacctga gtctgacgca ccgtgagtgc gagcgaaccg ccggccgagt cgtacgccgc
     2701 cgtgaccacg aagtccgggt ggccggcctg atagacccac tggctccaga accagtccag
     2761 gtttagcccg gtggcgtcga gcacagcccg gcgcagcccg tcgctggtgg cgttgccgaa
     2821 ggcgtgcctg gtcaggtacc ggttgatcgc ggcccagaac cgctcccggc ccagctgctt
     2881 cttcagcatc tccagaacca gcgcgccctt ggcgtagacg ttgttggagt tgaaggaagc
     2941 gagcggcacc cggcgacgga cgtcgagcga gagatattgt cggtactcgt ccagatagaa
     3001 ctcgtcctcg gcggatcggc cgagtttgct gccccgatac tggcccgcca tgaactcggc
     3061 cgtgccctcg ttgagccagt agttggccca gttctccgtc gtcaccaggt tgccgaacca
     3121 ctgatgcgcc agctcgtggg ggatcagcgt gtgctggtac cacgggcgat cacgatacgc
     3181 actggcatcc ggcagccaat ccaccagcgt ggtggcgccg acgttctcca tcccgcctac
     3241 gaagtccgtg accgtcgtct gggcgtacct gggccaggga tacttcacgc cggtgagccg
     3301 ggtgtatacc tccatgatgt ccggcgtgac cccgaagagg cggcgggcga gcggcacgtc
     3361 ctcgggatag acgtagtact cgagtgggac gtcacgccat cgatcggtca cctttttgag
     3421 cggcgccacc acgatcgaga tcaggtaggt cgatgcgggc cgctcctggg tccagtgcac
     3481 cgtgtgggtc cgctccctcc cgcgcccgcc gggccgatcg gccaccagcc ggccattcga
     3541 cacgaccgtg taggcggcgg gcacggtcgc cagcagttcc caggtggcct tgtcatgcgg
     3601 tgcagcgtag gtgggaatcc agttcgggtt cccgtccgtg ccccctccgc tgtagatctg
     3661 ctgtggccgg tggggtcgac ccggctcggc cttgaagaag tagagtcctc gcccctgggt
     3721 gatcttgccg cggtagtcca ccgtgaaccg gagcgtgtcg cggaacccgg caggcttggc
     3781 caaccggatg accaggctgt cgccctggcg ccgaaacggt aagggcgcac agggtgcgcc
     3841 ccctcgcgtt gcccggggca ggctcttcgg cttgcaagtg ccggctaccc ggcgaacaac
     3901 cagccgccgc cccatgtcca tgacgatgga gtccagcccg ggccgaagcg acacgacagt
     3961 cgtcgtcacc ttgccgtcga acgcggtggc atcccagtcg aagttggcga cctcgattcg
     4021 ctggtggatg aggtcgtaat cgtgtgaggg ggtgtcgcgg ccgctgagga tgcgctcggc
     4081 gttggttggt gcgatgggac tggcttgagc aacaagtgta tgggtggcca cacatatcaa
     4141 gagcgctgtc accctgagcg cagcgaaggg gccagaaaac gggcgcttgt cgaaccctcg
     4201 agttctggcc ccctccccct cgctgcgcga agggtcaggg tgacaccatg tggagatcac
     4261 agcgacaggg tcagttgcgc gagcggggcg aaggtgagac ggtggtgccg ggtgggaccg
     4321 agggcctgga ggccctcctg atgctcttcg gtaccatagc cgacattggt atgccagccg
     4381 tatccgggat gccgcgtcgc cagccgatgc attaatgcgt cgcgtatggt cttggcgagg
     4441 atcgccgcgg cggagatgga ctggcagcgc gcgtcgccgt cgatcaatgc gtcgtgggcg
     4501 tacccgatct cgggcagcgg cagtccatcg ataatgatgc gatagcgctg tccggcttcg
     4561 caggcgccgc agccctggcc catgggatag ggcgccaggg tggatcggcg gatcagacgg
     4621 gcgatggcgc gccgcatggc gatggcgctg gcgacccgga tgttgtaccg gtcgatctcg
     4681 tgagccgagg cggccccaat gccgaacgcg atcacccggc agcggatccg ttcggccagc
     4741 cgcgctcgca ccgaggcagg aagaatcttg ctgtcacgga gccctcgaac cgccgaacag
     4801 ccgcggggaa acacgacggc cgcggccacc actggtccag ccagggggcc acggccggcc
     4861 tcgtctaccc cgacgaggag ttgctcctct gcccagaccg cccgttcgcg ggtcagtgtg
     4921 gggcgagggg tcattggcta gctctcgcgc ttctcccgga tccgggcggc cttgccgctc
     4981 agcgcgcgca ggtagtacag cttggcgcgg cgcacccgtc cccggcggac cagctcgacc
     5041 gaggcgatag tgggactgtg caacgggaag agtcgctcga ccccgacacc cgccgagatc
     5101 ttgcggaccg tgaaggtctc gctgatcccg ccgccacgct tggcgatgac catcccctcg
     5161 aacgcctgca gccgctcctt gtcgccctca cggacgcgga ccatgacccg gactgtgtct
     5221 cccggctcga atgcaggaat gtccgtgcgc aagccctcac gggccacctc tgctaatcgc
     5281 tccatggtcg gatcctccct cggtccggcg tttgggtctg aaaaactgca acgatcttag
     5341 tactgtgagc cggttttgtc atcctggggg aatacccgcg tcattccgag caaagcgagg
     5401 aatcggacgg cctgccgatc agatcgggat tcccgacgtt cgcccggccg ctccctcgct
     5461 acgctcggga tgactcgttg tatcgatccc acaggtccgg ccttctttcc ttagtcagcc
     5521 gctccgactc tgcctgacgc cacgcctcga tctctgcatg gttgcccgag cgcagcacct
     5581 cgggtacctc gaggccccga taggccggcg gcctggtata gcttggcggg ctcagcaacc
     5641 catcgtagtg cgagtcggag ctggccgact cgtggtcgct catcgcgccg ggcagcagcc
     5701 tgaccaccgc gtcgagcacg cagagcgcgg caggctctcc gccggacagc acgaagtccc
     5761 cgaccgagat ctcctcggtg gcgagcccgt cggcgactcg ctgatccacg tccttgtagt
     5821 ggccgcagag cagcgtgagc cgctcgccca aggagaaccg caccgcatcg tcgtgggtga
     5881 agcgccggcc ccgggccgaa agcagcagga tcggcccggt tggccggagc gtctccaccg
     5941 cctcgaagaa cggctccggc ttcaggacca tccccgcacc gccgccatag gcgtaatcgt
     6001 ctaccgtcgc gtggcgatcg tgggtaaagt cacggagctg caccaggcgg aaccgcacca
     6061 gccctgctgc cgcggctcgc gccggtatac tcgcgccgag atatggtgcg atcacttccg
     6121 gaaagagcgt gacaacatca atcgtcagca tcgggcgcct ggcgagtcat tccgagcgta
     6181 gcgaggaatc ggacggccta cacattcaga tcgtgatgcc gacgttcagc gggccgaggg
//
LOCUS       DASYRV010000635        11508 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3928405, whole genome shotgun sequence.
ACCESSION   DASYRV010000635 DASYRV010000000
VERSION     DASYRV010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11508
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3928405"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1144
                     /locus_tag="VGQ24_16780"
     CDS             <1..1144
                     /locus_tag="VGQ24_16780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456551.1"
                     /translation="MQSDSVAAYGGNLVRFIGNVKYRDSTLTMDADYGTYHKTGEKWE
                     ARGRVNTRNLKTGSTLTGPALDYFRVVKGVRDTLEMYATGRPRIQYASADSTSRATEP
                     YIIVADRVRFKGSDRLWAGGKVTIDRSDFAARGDSLRLDTGKGSDGTLTGGNPVMRGL
                     GRDSFSVAGRRLDLKLDRREMTYVTAKGAGHAISKEWDLVADTIGLDLNNRKLEQTLA
                     WGDSTRPYANSPSYAMRADSLALDTPGQQLKEVRGFGTAWLGGATDAASKQRDWMRGD
                     TVVAQFVQRDSAGTRRSALSRIVARKGAQSYHLDPSSLHPERPSINYARGDVIVMTMK
                     QGVRTGVDRVDIRGQVDGIQLEPTDAQPADSAGVRPDSLSRPPGTR"
     gene            1141..2304
                     /gene="lptB"
                     /locus_tag="VGQ24_16785"
     CDS             1141..2304
                     /gene="lptB"
                     /locus_tag="VGQ24_16785"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR04406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEV8456552.1"
                     /translation="MTTPAAPEWVAALGDRDPSVPIALAAIVRAAGPSDSIAFSDLVL
                     GYREAYLACYQGDGDQEISGDDVRGYLTQSVLPRLTTEGWILDTAPGYWQTVKPRVAW
                     WGPTKEERQTVYDALLGSARRAVLRAKSFTRRRTKASLLEGLDLSKSFKGRRVVDRVS
                     VRVEQGEIVGLLGPNGAGKTTTFYLITGLMRPDQGRVLLDGHELTDAPMYQRARSGIG
                     YLAQEPSIFRRMTVEENILAILETRPLGREERQRQLDRMLDELSIKHLRKNKAYSLSG
                     GERRRLEITRALVSDPKFMLLDEPFAGVDPIAVHDIQTIVAGLRHRGIGVLITDHNVE
                     QTLDIVDRAYIMFEGKVQAAGTVRDLVYDDRVAQLYLGPTLTARLRARLEAVA"
     gene            2301..3860
                     /gene="rpoN"
                     /locus_tag="VGQ24_16790"
     CDS             2301..3860
                     /gene="rpoN"
                     /locus_tag="VGQ24_16790"
                     /inference="COORDINATES: protein motif:HMM:TIGR02395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HEV8456553.1"
                     /translation="MRTGLSQHTSLRQELRVNPRLYQAMDMLYMPMMDLQQHLKQELL
                     ANPFLELLEPEEETPEPLTAEQEKQQEKQKEKQDEVDWEEILLNGFEVGGTREQYEQL
                     EYNEPVTVETRNLIDHLREQLQMLTLTPRQLLLAEEFLGNINEEGYLAASLEEILGSV
                     NQLISGHLEAGHADDEEAEGEEAEEQTADSMSSPFSSNSTAPSAASSTAASALYTMQD
                     AEEMLTVIQRLDPSGIGARDLRECLLIQLVELADTESLTYRLVFEAFPDLIAHRWNDL
                     AKRFGVEPVAVQAAADQLSRLDPKPGLRYSEQTDGYIIPDLIVEKIGVRYHVFLNDTG
                     MPRLRLSRSYQEIARDKKKMTPENREFIASKMNSANWMIQAIEQRRQTMLKVMNFIVD
                     RQRDFFEKGIEYLKPLTLREVAEVINMHESTVSRVTNEKYVQTPRGVLPLKFFFSSAL
                     STSSGEDASARSIRAKLEKMVGEENSAKPLTDQQIVHLFQEQGIQIARRTVAKYRDQL
                     GILPARMRKRV"
     gene            3857..4813
                     /locus_tag="VGQ24_16795"
     CDS             3857..4813
                     /locus_tag="VGQ24_16795"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEV8456554.1"
                     /translation="MTVAPVEALDVSVLVPAKDEAENLPEFLQRCADALGPAGFSFEV
                     IVVNDGSRDGSDRVLRDLERQYPFLSVVTHRRQRGIADSLRSAGDIARGDVFVFYPAD
                     LQYLPEDIPGLVAPILEGRADIVTGTKQGKYEKAFVSNVYNVLCRWLFGVRVTDLNSI
                     KAYRREVMLGVPLRPDWHRYMVVIAAADGYRLTSLPVPLYPRRAGISKFNWKRIPVGL
                     FDLISVWFQLRFGRKPMLFFGVGGAILFVIGLLAGITALVLRFGYGIGLRPLLNLVEM
                     MVISGIVLFGFGFLGEIIAGLREETREIARDLARLEKLDVQD"
     gene            4817..5959
                     /locus_tag="VGQ24_16800"
     CDS             4817..5959
                     /locus_tag="VGQ24_16800"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEV8456555.1"
                     /translation="MRVVFLTHNYPRWPGDLSGSFLGTLASALVRRGIDVRVVAPSDA
                     GQGGATVVDGVPVRRVRYASANSEILAYRGTMLTALRRPDGWAALGGLWRALRRAARE
                     ELDAGADLIHAHWWVPAGLALPPSAPSVLTVHGTDAALLRGSRIARWLARPVFHRARV
                     VTAVSRELAEWVQSGTGRHLTPSHIQPMPIKSSNFPWSRGGGGAVVIARLTSQKRVRL
                     AIDAVATLVSCGHDLPLTIVGDGPERVALEQHVAKLRLSEFVRFVGSVDHSVVADYLA
                     RADVMIFPARGEGFGLAAAEALMAGVPVVACWDGGGVLDIVPETGAGRLTLPAAPALS
                     DAILSILQDPDRREMARLVGESWRARLSPDHVAEVCHGWYREALSA"
     gene            5952..6878
                     /locus_tag="VGQ24_16805"
     CDS             5952..6878
                     /locus_tag="VGQ24_16805"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HEV8456556.1"
                     /translation="MRSGWVRVAQALVGLSIVLFAIRALVRNWDQLRSQPLEWQLRPG
                     WLVLSLVLIWLMYALLILGWRSLLSGWGQRLDGWSAARIWILSSLGKYIPGKVWAVAG
                     MALLSQRAGVAAWAATGSAVVMQVLAIGTGAAVAGLAGAHILEAAQPGARAILVLLIA
                     GALLSVGLLLWPPFLRRLLRLAAPQAVGERQPSGRGIVVGIATNIVAWLGYGLALWLL
                     GRGLLPMSGLGLRLAIAVFTASYLAGFLALFAPGGIGVREGLFILMLQGPLGVGAATS
                     LALASRLLLTVAELGAAVPFLVFRRRQVRVPS"
     gene            6901..9243
                     /locus_tag="VGQ24_16810"
     CDS             6901..9243
                     /locus_tag="VGQ24_16810"
                     /inference="COORDINATES: protein motif:HMM:NF042625.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6541 family protein"
                     /protein_id="HEV8456557.1"
                     /translation="MPRWLPFVVMAALTLLLFRNYLVSGPGAMLLGQDTIAAGIMFRS
                     FFVEHVKALGRLPLWNPYLFGGVPTIEAGSGDFLYPTSILHFLLPMPSALAWKLILHV
                     YLAGVFMYLAARAFGVSRWVALFAGSAYLLSANLVSLVWGGQDGKMYVTALFPAALWL
                     LVTALNRRSWLRFLWLGAVAGLMVVAHPQLAYYAYIALLAYALGSLLTRRDKSGAVLA
                     TGLAGGMLAGLTAIGVAAITLFPMYRYLREDSPRAGPGRGFEYSASWSLHAEEALSLF
                     IPDFSGTDAQSETYWGKNPFKHNSEYGGALLLVLGIAAIAGLKGDRRRWGLGAMAAIA
                     LLYALGAGTPVFRLLYSVVPGLKNFRAPSLATFVAIAALTLLAALLLDRVLSGADPRA
                     RRTLSTALAAGAVAALLIAVPALAGGSGLYATWTSVFGAAEGGQRAQAFAANLPRIAG
                     GALIIALICALAWGAVFLWNRSKLRAAHVAMILTSLTAIDLLRVDNRYIQVVRYDDFF
                     PPDQGIQALRSRLVPGERVLTVGGVYPDGFLATYGVPEVFGYHGNQLRWYNEFTRYNA
                     RQGARTAADLEHYWLSFLNSAALRALAARYVLLPGQVELPGLKLLGADQRVAVYLNES
                     ALPGAAVVPEVQVEADSARQLALLWSPTFDPARTTLLDHPAPSIGQGGGTGTAVIEGN
                     GDDTLAVRARTTGPALLTISRTYHGSWQAEIDGVSAPVLRANHALMAVPLTSSGEHRI
                     LLRYRPRIVQLTAIVTTATWTIVLLVTAVAAALSLRRRRG"
     gene            9236..9958
                     /locus_tag="VGQ24_16815"
     CDS             9236..9958
                     /locus_tag="VGQ24_16815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenol monophosphomannose synthase"
                     /protein_id="HEV8456558.1"
                     /translation="MADRLLVVVPTYNERVNLPLVVPAILQQDPRIDVLVVDDNSPDG
                     TGQLADELAASTPRVHVLHRPNKSGLGKAYLAGFQWALGNRYDLIFEMDADFSHDPKF
                     LGDFVRAAANADLVIGSRYRAGVVNVINWPISRLLLSIGANQYARWITGLPLADSTGG
                     FKCFRREVLEAIDFEKVRSNGYAFQIEMSFRAWKKGFRLVEVPIVFTDRVEGQSKMNK
                     RIVREAIWMVWWLRLQSMIGRL"
     gene            9955..10773
                     /gene="dapF"
                     /locus_tag="VGQ24_16820"
     CDS             9955..10773
                     /gene="dapF"
                     /locus_tag="VGQ24_16820"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEV8456559.1"
                     /translation="MRGTLVYKMSGAGNDFVVLDGRFTDASRWPAAQVRVICDRRTGV
                     GADGLVILTPATADSVRMAYWNADGSHGALCGNAALCSGRLAVALEFVPPGEFCLLTD
                     AGVVRVRAVATGDVAEINLPDVDLPREHGGIRAAAGERWLSLGTVGVPHLVIRVDDIE
                     AVDVAGRGRSLRSHASVQPEGANVNFVAPTGGSWSIRTYERGVEGETLACGTGTVAAA
                     LALASRGEARLPLSFRSRGGPDLSVRAELEGSRATGIWLGGQGRLVFRGVWEGI"
     gene            complement(10979..>11508)
                     /locus_tag="VGQ24_16825"
     CDS             complement(10979..>11508)
                     /locus_tag="VGQ24_16825"
                     /inference="COORDINATES: protein motif:HMM:NF024915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEV8456560.1"
                     /translation="FLLASGTRKEQFAARSLNQARAAAEAGNLPLASSELQRLITTYK
                     GTDAASEAVIALNQVRMINGQSELAAVGLREYLAAKPAEKYVAPAYGLLGAALENSKR
                     WAEAADAYNQASNAAEVEYLKASYLIDAARAYRETGRLREAERTYRTILQKYPKSASV
                     TEAQVRLAELTDGKM"
BASE COUNT         1863 a         3712 c         3745 g         2188 t
ORIGIN      
        1 catgcagagc gacagtgttg ccgcgtacgg cggaaacctg gtcagattca tcggcaacgt
       61 gaaataccgc gactcgaccc tcaccatgga tgccgactac ggcacctacc acaagaccgg
      121 cgagaagtgg gaggcccggg gaagggtcaa cacccggaac ctcaagaccg gatcgaccct
      181 cactggcccg gcgctggact acttccgggt ggtgaagggt gtgcgtgata cactggagat
      241 gtacgcgacg ggccggcccc gcatccaata cgccagcgcc gactcaacct cgcgcgcgac
      301 ggagccctat atcatcgttg ccgatcgggt gcgcttcaag ggcagcgacc ggctgtgggc
      361 gggtgggaag gtcaccatcg atcggagcga cttcgctgcc cggggtgact cgctccggct
      421 cgacaccggg aagggaagcg acggcaccct gactgggggt aatccggtga tgcgtggcct
      481 gggtcgcgac agtttcagcg ttgcaggtcg caggctcgac ctcaagctcg accggaggga
      541 aatgacctac gtaaccgcca agggtgcggg tcacgcgatc agcaaggaat gggacctggt
      601 ggcggacacg atcggactcg acctcaacaa tcggaagctg gagcaaacgc tggcgtgggg
      661 tgattcgact cgcccctatg ccaactcccc gtcctacgcc atgcgagccg attctttggc
      721 gctcgacaca ccggggcagc agctcaagga agtacgtgga ttcggaaccg cctggctcgg
      781 tggggcgacg gacgcagcca gcaagcagcg cgattggatg cggggcgaca cggtggtcgc
      841 ccagttcgtg caacgagatt ccgccggcac ccgccgttcg gccctgagcc gcatcgtagc
      901 ccggaaaggc gcgcagtcgt atcacctcga tccgagctcc ctgcatccgg agcggccctc
      961 gatcaactac gcccggggcg acgtgatcgt catgacgatg aagcagggcg tacgcaccgg
     1021 agtggaccgg gtggacattc gaggacaagt cgatggaatc cagctggaac ccaccgacgc
     1081 tcagccggcg gattcggccg gagttcgccc cgactcactc tcgcgtccac caggtacccg
     1141 atgacgacgc ccgccgcccc cgagtgggtt gccgcgctcg gcgatcggga cccttcggtg
     1201 cccatcgccc tggcggccat cgtccgcgct gccggtccgt cggacagcat cgcgttttcg
     1261 gatctggtgc tgggctaccg tgaggcctac ctcgcctgct accaggggga cggcgatcag
     1321 gaaatctccg gcgacgacgt gcgcggttac ctgacgcagt cggtgttgcc ccggctcacg
     1381 accgagggat ggatcctcga cactgccccg ggttactggc agacagtgaa gcctagggtg
     1441 gcctggtggg ggccgaccaa ggaagagcgg caaactgtct acgatgcctt gctcgggtcg
     1501 gcccgccgcg ccgtgctccg ggccaagtcg ttcacccgcc gccgcaccaa ggccagcctg
     1561 ctggagggac tggatctctc taagagcttc aagggacgca gggtggtaga tcgggtgagc
     1621 gtccgggtcg agcagggtga aatcgtcggg ctcctcggtc ccaacggggc gggaaagacc
     1681 acgaccttct accttattac gggcctcatg cggcccgacc aggggcgggt actcctggat
     1741 gggcacgagt tgaccgatgc tcccatgtac cagcgggcgc gcagcggcat cggctacctc
     1801 gcgcaggagc cgtccatctt ccgaaggatg accgtcgagg agaacattct ggcgatcctg
     1861 gaaacccggc ctctcggccg agaggagcgg cagcgccagc tggatcgcat gctggacgag
     1921 ctgtcgatca agcacctacg gaagaacaag gcctactcgc tgagcggagg cgagcgccgg
     1981 cgcctggaga tcacccgcgc gctggtgtcg gacccgaagt tcatgctgct ggacgagccg
     2041 ttcgccggcg ttgacccgat cgctgtgcac gatatccaga ccatagtcgc cggactgcgg
     2101 catcgcggaa tcggcgtgct gattacggac cataacgtgg agcaaaccct cgacatcgtg
     2161 gatcgggctt acatcatgtt cgaaggcaaa gtgcaggccg ccggtaccgt gcgcgatctg
     2221 gtgtacgacg accgggttgc ccagctctat ctcggaccca cattgaccgc gcgacttcgc
     2281 gcccggctcg aggcagtggc atgaggaccg gcctctctca gcacaccagt ctccggcagg
     2341 agctccgggt caacccgcgg ctgtaccaag ccatggacat gctctacatg cccatgatgg
     2401 acctccagca acacctcaag caggagttgc tggccaatcc gttcctggag ctgctcgagc
     2461 ccgaagagga gacgccggag ccgctcacgg ccgagcagga gaagcagcag gaaaagcaga
     2521 aggagaagca ggacgaggtc gactgggagg agatcctgct caacggcttc gaagtgggag
     2581 gcacccggga gcagtacgag cagctcgagt acaacgagcc ggttaccgtc gagacccgga
     2641 atcttatcga tcacctccgg gagcagctcc agatgctgac ccttactccc cgacagctgc
     2701 tgctcgccga agagtttctg ggcaacatca acgaggaggg ttacctcgcc gcctcgctcg
     2761 aggagatcct cggctcggtc aatcaactca tctcgggcca tctcgaggcg ggtcacgcgg
     2821 acgatgaaga ggcggaagga gaagaggcgg aagaacagac ggcggactcg atgtcgtctc
     2881 cattttcttc caactctacc gccccttccg ccgcttcatc taccgccgct tccgccctct
     2941 acaccatgca ggacgccgag gagatgctca ccgtcatcca gcgtctggat ccctccggca
     3001 tcggtgcgcg tgacctccgg gaatgcctgc tcattcagct ggtcgagctg gccgacacgg
     3061 agtcgctcac gtaccgcctg gtgttcgagg cgttccccga tctcatcgcc catcgctgga
     3121 acgatctggc caagcgcttt ggggtcgagc cggtggcggt acaggcggcg gccgatcagc
     3181 tctcccggct cgaccccaag ccgggcctca ggtattccga gcagaccgac ggctacatca
     3241 tccccgacct gatcgtggaa aagatcggcg tgcgctacca cgtcttcctc aacgacaccg
     3301 ggatgcctcg gctgcgcctg agccgctcgt atcaggagat tgcgcgggac aagaagaaga
     3361 tgacgccgga gaaccgcgag ttcattgctt ccaagatgaa cagcgcgaac tggatgattc
     3421 aggcgatcga gcagcggcgg cagacgatgc tgaaggtgat gaacttcatc gtagaccggc
     3481 aacgtgactt cttcgaaaag ggcatcgagt acctcaagcc actcaccctc cgcgaagtgg
     3541 ccgaagtgat caacatgcac gagtccaccg tcagccgcgt gaccaacgaa aaatacgtcc
     3601 agaccccgcg cggggtgctc ccgctcaagt tcttcttctc cagcgcgctc tcgacctcat
     3661 ccggcgaaga cgcgagtgcg cgatccatcc gggccaagct ggagaagatg gtcggcgagg
     3721 agaacagcgc gaagccgctc accgaccagc agatcgtcca ccttttccag gagcaaggga
     3781 tccagatcgc ccgccgcacg gtcgccaagt accgcgatca gctcggcatc cttccggccc
     3841 gaatgcggaa acgggtatga ccgtagctcc ggtcgaggcg ctggacgtga gcgtactcgt
     3901 cccggctaag gacgaggcgg aaaaccttcc cgagtttctc cagcgctgcg ccgacgccct
     3961 tggccctgcg ggcttctcgt tcgaggtgat cgtcgtcaac gacggctccc gggacgggag
     4021 cgatcgggtg ctccgcgatc tggagaggca atacccgttc ctctcagtcg tcacccaccg
     4081 gcggcagcgc gggattgccg acagcctccg ctcggccggc gacattgccc gtggcgacgt
     4141 cttcgtcttc tatccggctg atctccagta cctccccgaa gacatccccg ggctggtagc
     4201 tccgatcctc gaggggcggg ccgatatcgt caccggcacc aagcagggca agtacgagaa
     4261 ggcgtttgtc tccaatgtgt acaacgttct gtgtcgctgg ctcttcggcg tccgggtcac
     4321 cgatctcaat tcgatcaagg cgtaccggcg ggaggtgatg ctcggcgtcc cactccggcc
     4381 cgactggcat cgctacatgg tcgtgatcgc cgcagccgac ggctatcgcc tcacctccct
     4441 gccggttcca ctctatcccc gtcgggccgg tatctcgaag ttcaactgga aacgcatacc
     4501 cgttggactc tttgacctga tctcggtctg gttccagctc cggttcggtc gcaagccgat
     4561 gctcttcttc ggcgtcggtg gagccattct cttcgtcatc ggcctgcttg cgggtattac
     4621 cgccctggtg ctgcgcttcg gttacggtat cggcctccgc ccgctgctga atctggtcga
     4681 gatgatggtg atcagcggca ttgtcctgtt cggattcggc tttctgggcg agatcatcgc
     4741 cggactgcgt gaggagacgc gggagattgc gcgcgacctc gctcggctcg agaagctcga
     4801 cgtccaggac tgaccggtgc gggtcgtctt cctgacccat aactatcccc gttggccagg
     4861 cgatctttcc ggatcgttcc tcgggacgct ggcatcggct ctggtccggc ggggtatcga
     4921 cgtgcgcgtg gtggcgccga gtgacgcggg gcaggggggc gccacggtcg tggatggcgt
     4981 accggttcgc cgggttcgct acgcttcggc caactccgag atcctcgcct atcgcggcac
     5041 catgctgacc gcgctgcgcc ggcccgacgg gtgggcggcg ctggggggcc tctggcgggc
     5101 gcttcgccgc gcggctcgtg aggagctcga cgccggcgcc gaccttatcc acgctcattg
     5161 gtgggtgccc gctgggctcg ccctcccgcc gagcgcgccg agcgtgctca cggtgcacgg
     5221 caccgacgcg gcgctgctcc ggggctcgcg cattgcccga tggctggccc gccccgtctt
     5281 tcaccgtgct cgggtggtca ccgccgtttc ccgggagctc gccgagtggg tgcagagcgg
     5341 gaccggacgc cacctcactc cttcgcatat ccagccgatg ccgatcaaga gcagcaactt
     5401 tccctggagt cgaggcggcg ggggagccgt agtgatcgcc cggctcacct cccagaagcg
     5461 tgtgcgcctc gccatcgatg ccgtggctac cctcgtctcc tgcggccacg accttcccct
     5521 caccattgtg ggcgacggcc ccgagcgggt cgccctcgag cagcacgtcg ccaaactacg
     5581 actctcggag ttcgtgcgtt ttgtcggaag cgtcgaccat tcggtggtcg cggactatct
     5641 cgcccgggcc gatgtcatga tcttccccgc tcgaggtgaa ggattcggac tagccgcggc
     5701 ggaggcactg atggccgggg tacccgtggt cgcttgctgg gacggcggcg gcgttctcga
     5761 tatcgtgcct gaaaccggcg cggggcgact cacccttcct gcggcgcccg ccctgagcga
     5821 tgcgatcctg agcatcctgc aggatccgga tcggcgtgaa atggcccggc tggtcggcga
     5881 gtcctggcgg gcacggctct cgccggacca cgtggcagaa gtctgtcacg gctggtatcg
     5941 cgaggccttg agtgcgtagc ggctgggtcc gggtcgccca ggcgctggtg ggtctctcga
     6001 tcgtcttgtt cgcgatccgg gcgctcgttc ggaactggga tcagctccgc tcacaaccgc
     6061 tcgagtggca gctccggccc gggtggctcg tcctcagcct cgtgctcatc tggctgatgt
     6121 acgccctcct gattctcggc tggcgcagcc tgctgagcgg ttggggccaa cggttggatg
     6181 ggtggagcgc tgctcggatt tggatcttgt ccagtctcgg caaatatatc ccgggaaagg
     6241 tgtgggccgt ggccggaatg gcgttgctat cgcaacgggc gggcgttgcg gcgtgggcgg
     6301 ccaccggctc ggccgtggtg atgcaggtgc tcgcaatcgg gacgggagcg gcagtcgcag
     6361 gactggccgg tgcccacatc ctcgaggcgg ctcagccagg cgcccgcgcc attctcgtgc
     6421 tcctgatcgc cggcgccctc ctttcggtgg gactcttgct ctggccacct ttcctgcgtc
     6481 gcctgttgcg actggcggca ccccaggccg tgggcgagcg acagccttcg ggcaggggta
     6541 tcgtcgtagg gatcgcgacg aatatcgttg cgtggctggg ctatggcctg gctttgtggc
     6601 tcctcgggcg cgggctgctg cccatgtcgg gtctcggcct ccgcctggcg atcgccgtat
     6661 ttacggcctc gtacttggct ggatttctgg ctctatttgc gccaggcggt atcggtgtac
     6721 gggaaggcct cttcattctc atgctgcagg ggccgctcgg tgttggcgcg gctacctcgc
     6781 tggcattagc ctcgcgacta ttgctgacgg tcgccgagct gggtgcggcc gttccattcc
     6841 tggtctttcg ccggaggcag gtgcgtgtcc catcctgagt cgccatccgc cttagaccag
     6901 atgccgcgct ggctgccatt cgtcgtcatg gccgctctga cgctgcttct cttccgtaac
     6961 tatctcgtca gcgggcccgg tgcgatgctg ctgggacagg ataccatcgc cgccggcatc
     7021 atgtttcgtt ctttctttgt cgagcacgtc aaggcgctgg gccggctgcc gctgtggaat
     7081 ccatatctct tcggcggggt gccgaccatc gaggcaggta gcggggactt tctctatccc
     7141 acctcgatcc tgcactttct cctccccatg ccgagtgcgc ttgcctggaa gctcatcctt
     7201 cacgtgtacc tcgccggcgt gttcatgtat ctggcggccc gggcgttcgg ggtaagccgg
     7261 tgggtggctc tgttcgctgg ttccgcctac ctcctttccg ccaacctcgt gagcctcgtc
     7321 tggggcgggc aagacggcaa gatgtatgtc accgccctgt ttccggcggc gttgtggctc
     7381 ctcgtgaccg cgctcaaccg gcgatcatgg ctccgcttcc tatggctcgg cgccgtggcc
     7441 gggctcatgg tggtagccca cccgcaactg gcgtactacg cctacatcgc cctcctggcg
     7501 tatgctctcg gcagcctgct cacccgccgc gacaaaagcg gagcagtgct cgccactggg
     7561 ctcgcaggcg gtatgctcgc cgggctcacg gccatcgggg tggcagctat tacgctgttc
     7621 cccatgtacc ggtacttgcg ggaggattcg ccccgcgccg gtcctggacg gggtttcgag
     7681 tactcggcca gctggtcgct ccacgccgag gaggcgcttt cgctgttcat tcctgacttc
     7741 agcggaaccg acgcgcagtc ggagacgtac tgggggaaga accccttcaa gcacaactcg
     7801 gaatacggcg gggccctgct gttggtgctg ggcatcgcag ccatagcggg actcaaaggc
     7861 gaccgccggc gctgggggct gggtgcaatg gccgcgatcg cgctcctgta cgcgttgggc
     7921 gctggaaccc cggtgttccg gctgttgtac tccgtagtgc cgggcctcaa gaactttcgg
     7981 gctccgagtc tcgccacctt cgtagccatc gctgcgctca cccttctggc cgcgctacta
     8041 ttggaccgag tcctgtccgg ggcggatccg cgtgcccgcc ggaccctctc gactgctctc
     8101 gcggccggcg ccgttgcggc cctactgatc gccgtcccgg ccttggcagg cggatcgggc
     8161 ctgtatgcca cctggacttc tgtcttcggt gccgccgaag gaggccagcg agcgcaagcc
     8221 ttcgcggcca acctcccgcg gatcgcgggt ggtgcgctca tcattgcgct catctgcgcg
     8281 ctggcgtggg gcgcggtatt cctgtggaat cgaagtaagc ttcgagcagc gcatgtcgcg
     8341 atgatcctga cgagcctgac cgccatcgac ctgcttcgag tggataaccg ctacattcag
     8401 gtcgtacggt acgacgattt cttcccaccg gatcagggca tccaggccct acgctcgcgg
     8461 ttggttcccg gcgagcgggt gctcaccgtg ggcggagtgt atcccgacgg ttttttggcg
     8521 acgtatgggg ttcccgaagt gtttggctac catggaaatc agcttcggtg gtacaacgag
     8581 ttcactcgct acaacgcgcg ccagggcgcc cgcaccgcgg ccgatctgga gcactactgg
     8641 ctgagctttc tcaacagcgc ggcgctccgg gcgcttgccg cgaggtacgt cctcttgccc
     8701 gggcaggtag agctccccgg tcttaagctc ctgggcgccg atcagcgggt tgcggtctac
     8761 ctcaacgaaa gcgccctgcc cggcgctgcg gtggtaccgg aggtgcaggt cgaagcggac
     8821 tccgctcgtc agcttgcgct cctctggtca cccaccttcg atccggcaag gaccactctg
     8881 ttggaccatc cggcaccatc gatcgggcag gggggaggca ccggcactgc ggtcattgaa
     8941 gggaacgggg atgacactct ggcggtgcga gctcgcacca cgggaccggc gctgctgacc
     9001 ataagccgca cctatcatgg ctcgtggcag gcggagatcg atggcgtttc cgcgcccgtc
     9061 ctccgggcga accatgcctt gatggccgtg ccattgacca gtagcggcga gcatcggatt
     9121 ctgctgcgct accggcccag gatcgttcag ctcaccgcga ttgtgaccac cgccacctgg
     9181 accatcgtgc tcctggtgac tgccgtggcg gcggccttga gccttcgtcg gcgacgtggc
     9241 tgatcgtctc cttgtggttg tgccgaccta taacgagcgg gtcaacctcc cgctggtggt
     9301 gcctgccatc ctccagcagg atccccggat cgatgtgctg gtcgtagacg acaactcacc
     9361 cgacggcacc ggccagctgg ccgatgagct ggctgcctcc acgccacggg tgcacgtcct
     9421 gcaccggccc aataaatcag gtctggggaa ggcctacctg gccggcttcc agtgggcgtt
     9481 gggtaaccgg tatgacctga tcttcgagat ggacgcggat ttctcccacg atccgaaatt
     9541 cctgggcgac ttcgtccgcg ccgcggccaa cgctgacctg gtgattgggt cgcgctaccg
     9601 cgccggggtg gtgaacgtca tcaactggcc gatctcccgg ctcctgcttt ccatcggtgc
     9661 caaccaatac gcccgctgga tcaccggtct tccgctggct gactctaccg gcggcttcaa
     9721 gtgctttcgc cgtgaggtgc tcgaggccat cgatttcgag aaggtgcggt ccaatggcta
     9781 cgcctttcag atcgaaatga gcttccgggc ctggaagaag gggttccggc tggtagaggt
     9841 ccccatcgtg ttcaccgatc gggtcgaggg acagagcaaa atgaacaagc gcatcgttcg
     9901 ggaggcgatc tggatggtct ggtggctccg gctccagtcc atgatagggc gactgtgaga
     9961 gggactctcg tctataagat gagcggcgcg ggcaacgact tcgtcgtgct cgacggacgc
    10021 tttactgacg ccagccgctg gccggcagcc caggtaagag tgatttgtga ccgccggact
    10081 ggagtcggcg ccgacgggct cgtcattctc acacccgcaa ccgcggattc cgtccgtatg
    10141 gcctactgga atgcggacgg gtcgcacgga gcgctctgcg gcaacgcggc gctttgcagt
    10201 ggaaggctgg ccgtagcact ggagttcgtg ccacccgggg agttctgcct gctgaccgat
    10261 gcaggggtgg tgcgggtcag agccgtggct accggggacg tggcagagat caatcttccc
    10321 gatgtggatc tgccacggga gcacggcggg attcgggcgg cggccggcga gcggtggctg
    10381 tcgctgggta cggtgggggt accccatctg gtgatccggg tggacgacat cgaagcggtc
    10441 gatgtggccg gccgcggacg gtcgcttcga tcccacgcga gtgtccagcc cgagggagcc
    10501 aacgtcaatt tcgtggctcc taccggcggg tcctggtcga tccgcacgta cgagcgcggc
    10561 gtcgagggtg agacgctggc ctgcggaacc ggtaccgtgg cggccgctct ggccttggca
    10621 tctcgggggg aggcccggct tcccttgagt ttccggagca ggggaggccc ggacctcagc
    10681 gttcgggcag aactggaagg ctcccgagcg acggggatct ggctgggggg ccagggcaga
    10741 ctggtctttc gtggagtgtg ggaaggtatc tagaccattc cttagttcat tgcaactcaa
    10801 tcacttacat agatgatccg cagcgccatc catagttctc cacagttttc cccaagcaga
    10861 cttaacataa catatcttat acgacgttcc tttcaggccc aaagaagaga ggggcccgca
    10921 cagtggtagg cccctcaccc attaccggtt cacgctgacc gccgacccgg tctagtgcct
    10981 acatcttccc gtccgtcaac tccgccagcc ggacctgggc ctcggtgacg ctcgccgatt
    11041 tggggtattt ctgtaatatg gtccggtatg tccgttccgc ctcccgaagc ctaccggtct
    11101 cccgatacgc ccgtgcggcg tcgattagat agctggcctt gagatactcg acctcggccg
    11161 cgttcgacgc ctgattatag gcatctgcgg cttcggccca gcgtttcgag ttttccagcg
    11221 cggcgccgag caggccgtag gccggcgcca catacttctc ggccggcttg gcagccaggt
    11281 actctcgcaa tccaaccgca gcgagctcgc tttggccatt gatcatgcgg acctggttga
    11341 gggcgatcac ggcttcgctt gccgcatcag tgcccttgta ggtcgtgatg agtcgttgca
    11401 gctcactcga ggccagcggc agatttccgg cctcggcggc ggcccgggcc tggttcaggc
    11461 tccgggcagc aaactgctcc tttcgtgtcc cactcgccag caggaacc
//
LOCUS       DASYRV010000636         4166 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3930078, whole genome shotgun sequence.
ACCESSION   DASYRV010000636 DASYRV010000000
VERSION     DASYRV010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4166
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3930078"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1176)
                     /locus_tag="VGQ24_16830"
     CDS             complement(<1..1176)
                     /locus_tag="VGQ24_16830"
                     /inference="COORDINATES: protein motif:HMM:TIGR01499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HEV8456561.1"
                     /translation="MSLTYDEALDFLFPRTTTIKFGLATTRALLKSVGNPHEVIPSIH
                     IGGTNGKGSVSTMVAAALRESGWRVGLYTSPHLVSFRERIRVDGVPISEGAVAMWTER
                     LLPPILERKATFFEATTALAFADFAARGAEIAVVEVGLGGRLDSTNVVRPLVSGVTKI
                     ERDHMKYLGDSLELIACEKAGIAKPGAPFVVGEKDPKLVQVLRREARRAISRSGGRIP
                     ADIRVLPPEYEWCGPLSLAGPHQRRNAAVAHGILCALPAPYRPSMAQIERAFGNVRVP
                     GRLDRRGRWLFDVAHNPDGMRALVAALAVLRPARPLHALVSILGDKEWPDMLVQLDQA
                     IDRGVLTIAPTAAARGWDIDWLGRWLRDPSRPPPHAAWSLVPDFTEAIEKVQEGAGTI
                     "
     gene            complement(1285..2151)
                     /gene="accD"
                     /locus_tag="VGQ24_16835"
     CDS             complement(1285..2151)
                     /gene="accD"
                     /locus_tag="VGQ24_16835"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HEV8456562.1"
                     /translation="MAWFKKERKPRTSQRERLEIPADAWEKCDSCGHIDIREKFEKAL
                     NVCPECGKHRRIAAEDYIELLTDQGTWRELYAGLRSVDPLNFEHYADRLIVAREKGGE
                     ADAIFAGTARLDGLHFNLAVMNFRFMGGSMGSVVGEKIARLARRSLEKKIPLVIVSTS
                     GGARMQEGVLSLMQMAKTSAAIAQLHRECIPYISILTDPTTGGVSASFAMQGDVVLAE
                     PGAVIGFAGQRVIKQTIGQDLPDGFQTAEFLLEHGQVDDVVPRASLRDTTARLLRHMQ
                     GQRPHVELAELS"
     gene            complement(2263..3504)
                     /gene="rodA"
                     /locus_tag="VGQ24_16840"
     CDS             complement(2263..3504)
                     /gene="rodA"
                     /locus_tag="VGQ24_16840"
                     /inference="COORDINATES: protein motif:HMM:TIGR02210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HEV8456563.1"
                     /translation="MRNPSIDRQLITVTFGLILFGLATLYSAGQTDVPTRAAGVWQRQ
                     LMWVGVGIVGAWILFHVSLRVLEWLAPALYAFSLLLLGVVLVVGTGAGTAESSHSWLS
                     VGGHQIGQPSELAKVATVLMLARFLSGRKEPPRSLKDLVGPSLIVGIPCVLVLRQPDL
                     GSALVFIGIYFAMLFWAGVRPRMLFLLASPVISLLLAFNTLAWSLWMITFVIILIAWR
                     PYVWDWVVFLTATVAMGAVAMPLWKRLAPYQQNRLLTFLNPEVDPRAAGYHAIQSKVA
                     IGSGGWFGTGYTGGPQKRLAFLPEQHTDFVFSVVGEELGFVGVLVALTLFLALFLVLL
                     RIARRATDPFSSLAVFGIVGLFFTHVFENVGMTVNLMPITGIPLPLFSYGGSFFIICA
                     LCLGLALRVAWDSRLSGYADT"
     gene            complement(3501..>4166)
                     /locus_tag="VGQ24_16845"
     CDS             complement(3501..>4166)
                     /locus_tag="VGQ24_16845"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HEV8456564.1"
                     /translation="IDLENELSPIYPTSLAYFDRLYGPRHWSAPGSTLNFSIGQGENT
                     QTLINMVKFYQGLAGPGATLTPYIVKPGSSRARSLGLTAKELDGLRRALIAVVERGTA
                     SASRRTDLAVAGKTGTAQNPHGDDHGWFIGFAPADKPELVVGGIMEFAKHGTTVAPYV
                     VQTLRRYILGPDVTGPVRLGVLLDETVASQDTAPRPIELNPDSAAAVKAAADSARRAE
                     PAQ"
BASE COUNT          797 a         1350 c         1360 g          659 t
ORIGIN      
        1 gatcgtcccg gcgccttcct gtactttctc aatcgcctcg gtgaagtccg gaaccagact
       61 ccacgccgca tgcggtgggg gacgcgatgg atcgcgaagc cagcgtccca gccagtcgat
      121 gtcccagccc cgggccgccg cagtcggcgc gatagtgaga accccacgat cgatggcctg
      181 atcgagctgc accagcatgt ccggccactc cttgtcgccc agaatcgaca ccagcgcgtg
      241 aagcggacgg gcaggccgga ggaccgcgag ggcggcgacc agtgctcgca tgccatccgg
      301 gttgtgggcc acgtcgaaga gccagcgccc tcggcggtca agccggccag ggactctgac
      361 attaccgaac gctcgctcga tctgcgccat gctgggccga tagggcgccg gcaaggcgca
      421 caagattccg tgtgccaccg ccgcgttccg ccgctggtgg ggcccggcca ggctgagcgg
      481 gccgcaccac tcgtactccg gcggcaggac tctgatatcg gccggaatac ggccgccaga
      541 acgggagatt gcccgccgag cttcccggcg cagcacctgc accagcttcg gatctttctc
      601 gccgaccacg aagggcgccc ccggcttggc aatgcccgcc ttctcacacg cgatcagctc
      661 gagggagtca ccgagatatt tcatgtggtc gcgctcgatc ttggttactc cgctcacgag
      721 cggacggacc acgttagtgc tgtccagccg cccgcccagt ccgacctcga ctacggcgat
      781 ctcggctccc ctggcggcaa agtccgcaaa agccagcgcg gtcgtcgcct caaagaacgt
      841 cgccttccgc tccaggatgg gtgggagcag ccgttcagtc cacatggcaa cggcaccctc
      901 ggagatgggc acgccgtcga cccggatgcg ctcgcgaaac gagaccaggt ggggagaggt
      961 atagagcccg acgcgccagc ccgactcccg aagtgccgcc gccaccatgg tggacacact
     1021 ccccttcccg ttggtgccgc cgatgtggat cgacggtatc acctcatgcg ggtttcccac
     1081 cgacttcagg agggcgcggg tggtggccag cccgaacttg atggtggtcg tacgggggaa
     1141 aaggaagtcg agtgcctcgt cgtaggtcag cgacatcgga tctcgattgg atgggtaccg
     1201 agcccgcccg ccgcccgccg gaacgacggc gccccaccca ggttccgtcg tgggtggggc
     1261 gcgggagcga cgcgtcgctc gaactcagct cagttcggcg agctcgacat gaggccgctg
     1321 tccctgcatg tgccggagca acctggcggt ggtgtcgcgc agcgaggccc ggggaaccac
     1381 gtcatccacc tggccatgct ccagcaggaa ttcggccgtc tgaaagccgt ccggaagatc
     1441 ctggccgatg gtctgcttga tgacccgctg tcccgcgaag ccgatcacgg cgcccggctc
     1501 ggccagcacg acgtcaccct gcatcgcaaa ggaagcggag acgccaccag tggtcggatc
     1561 ggtcagaatc gagatgtaag ggatgcattc gcggtggagc tgtgcgatgg ccgccgaggt
     1621 cttggccatc tgcatcaacg agaggacccc ttcttgcatt cgggcaccgc cggatgtgga
     1681 gacgatgacc agcgggatct tcttctcgag cgagcgccgc gcaaggcggg caatcttttc
     1741 gcctaccacc gaacccatcg agccacccat gaaccggaaa ttcatcaccg caaggttgaa
     1801 gtgcaggcca tccagccggg cggtaccagc aaagatggcg tccgcctctc cacccttctc
     1861 ccgggcgact atgagacggt cagcgtagtg ctcgaaattc aagggatcga ccgagcggag
     1921 gccggcatag agctcacgcc aagtgccctg gtcggtcagc agctcgatgt aatcctcggc
     1981 ggcgatccgg cggtgtttgc cgcattcggg acacacattg agcgccttct cgaacttctc
     2041 ccggatatcg atgtggccac agctgtcgca cttctcccag gcgtcggccg ggatctccag
     2101 tcgttcacgc tgcgacgtcc gtggtttgcg ctccttctta aaccatgcca tcacagccat
     2161 agaagtaggt agcgtcgagg tgaggggtcg aagggcttgg tcaggccctg caatctcatc
     2221 gtaccctgcc ctcagcgcta ggcccctaac agtaactcaa tgctacgtat cggcataccc
     2281 agacagcctg gaatcccagg ctacccggag cgccaggccc aggcagagtg cgcaaatgat
     2341 gaaaaaggac cccccgtagg agaagagtgg cagcggaatt ccggtgatcg gcatgagatt
     2401 cacggtcatg ccgacgttct cgaagacgtg ggtaaagaag aggcccacga tgccgaacac
     2461 ggccaggctg ctgaacggat cggtggcgcg ccgggcgatc cgaagcagta ccaggaagag
     2521 cgccaggaag agggtcaggg ccaccagcac gccgacgaag ccaagttcct cgcctaccac
     2581 cgagaagacg aagtcggtgt gctgttctgg cagaaacgca agccgcttct ggggccctcc
     2641 ggtgtagccg gtcccgaacc agccacctga gccgatggcc accttggact ggatggcgtg
     2701 ataccccgcc gcgcggggat ccacttccgg gttcaggaac gtgagcagcc gattctgctg
     2761 gtacggcgct agccgtttcc acagcggcat ggccacggca cccatggcta cggtcgcggt
     2821 cagaaatacc acccaatccc agacgtaggg ccgccaggcg atcaggatga tcacgaaggt
     2881 gatcatccag aggctccagg ctaacgtatt gaacgcgagg agcagactga tgaccggcga
     2941 agccagaaga aaaagcatcc ggggccggac gccggcccag aacagcatcg cgaagtagat
     3001 cccgatgaac acgagtgcgc tgccgagatc aggctgcctg agtacgagga cgcaggggat
     3061 accgacgatc agcgacgggc cgacgaggtc cttcagggac cggggcggct ccttccggcc
     3121 ggacagaaat cgcgccagca tcagcaccgt tgccaccttc gccagctccg atggctggcc
     3181 gatctgatga ccaccaaccg aaagccagct atgactgctt tcggcggttc ccgcaccggt
     3241 gcccacgacg aggacgacac cgagcagcag gaggctgaag gcgtacagcg cgggggccag
     3301 ccattcgagg acccggaggg agacgtggaa gaggatccat gctccgacga tcccgacgcc
     3361 gacccacatg agctggcgct gccagactcc cgccgcccgg gtgggaacat cggtctgccc
     3421 cgccgaatag agcgtcgcca ggccgaacag gatgaggccg aaggtgaccg tgatgagctg
     3481 gcggtcgatc gaggggtttc tcattgggcc ggctcggcgc gtcgagcgga gtctgccgcc
     3541 gctttgacgg ccgccgctga atcggggttc agctcgatgg ggcgcggtgc ggtgtcctgg
     3601 gacgccacgg tctcatcgag gagcacgccg agcctcaccg gaccggtgac atcggggccg
     3661 aggatgtagc gccgaagtgt ctgcacgaca tatggcgcca ccgtggtgcc gtgcttggcg
     3721 aactccatga tgccgcccac gaccagctcc ggcttgtcgg ccggcgcaaa gccgatgaac
     3781 cagccatgat cgtcaccgtg ggggttctgg gcggtgccgg tcttccccgc caccgcgagg
     3841 tcggtgcggc ggctcgcgga cgcggtaccc cgctccacta ccgcgatcag cgcgcggcgg
     3901 agcccatcca gctccttggc ggtcagtccg agggaccgcg ccctgctgga gccgggcttg
     3961 acgatgtacg gggtgagtgt agcgccggga ccagccagac cttggtagaa cttcaccatg
     4021 ttgatcaggg tctgggtgtt ctccccctgc ccgatcgaga aattgagcgt gctgccgggc
     4081 gcactccagt ggcgcggacc gtagagacgg tcgaagtagg ccagcgaggt cggatagatc
     4141 ggactcagct cattctcgag gtcgat
//
LOCUS       DASYRV010000637         4601 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2876724, whole genome shotgun sequence.
ACCESSION   DASYRV010000637 DASYRV010000000
VERSION     DASYRV010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4601
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2876724"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2591)
                     /locus_tag="VGQ24_16850"
     CDS             complement(<1..2591)
                     /locus_tag="VGQ24_16850"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEV8456565.1"
                     /translation="MADPFDHLKEAMADRYTLERELGAGGMATVYLAHDPRHNRKVAI
                     KVMNSELAAIIGAARFLKEIETTANLQHPNILPLFDSGEVGGTVFYVMPYVQGESLRG
                     RLAREVQLPVADAVRIAVEIAGALDYAHRHGVIHRDIKPDNVLLHDGRALVADFGIAL
                     AWSHRDGRTRITKSGVSLGTPHYMSPEQAAGDQNLDPRADTYALGVVLYEMLAGQPPF
                     TGLTPQAIFARVMSEEPRPVVFHRKTVPPHVDAAVARALEKLPADRWQTAAEFAAALT
                     GAGAGHKARGHRLSGALGRSAIPWALSAALLLTVAWVGLRNGRGALPSAAPVRFSIEL
                     DPGVQPTFTPIVRLSPDGRQLFVSAMVGRREEVLRRPFDQMRMEVIAGAGQGEQGTGN
                     SRPFVSPDGQWIAYARQGKLRKVRVEGGPAIDLAVADWAGGSWGRNGKLVYTKAYNTG
                     LWIVSEGGGDERMLTTPDTARGELGHWWPQILPDGDHVLFTAYRTPIERATIEVLSIS
                     SGKRDVVFTGGVFGFYVPTGHLLYAVGETIRAVPFDLDRLAVTGAALPVVDSVAMNPT
                     DGAAAFDVSENGTLAYLPVSSYIRETELVLVDRRGNESRALPASDRYDHPRLSPEGGR
                     IAVDIRSANSLGDIWVFQVGRSGGLRLTAEGGRDFGAEWTPDGRELIYSSEHPFFDLY
                     RRAADASRPAEPLLTGGFDRYPGSVSSDGRLFAFSLAAPGGELWTVKLRGPPAPARYF
                     ANGFNLAHATLSPDGRWMAYDSDESGRVEVYAQSYPNPSLKRWKVSPANGSEPMWTRG
                     GRELVYRKGDSMMTVSVDLQNGRSSAPRALFGGPYPDSPGWTRPRSYDVSRDGERFLL
                     TKLPAEQS"
     gene            complement(2631..3419)
                     /locus_tag="VGQ24_16855"
     CDS             complement(2631..3419)
                     /locus_tag="VGQ24_16855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015880361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEV8456566.1"
                     /translation="MKGIPETKKHRPKLAPTVPGIFIQAVAREGVLGAAPRDYPYSVP
                     AIRHLTELKFVTPVTFFVGENGSGKSTLLEGIAAAFGLNPEGGTKHERFTTRSTHSEL
                     FRALILNKSRDAPTDSYFLRAESFYNVASAMDPRDVDQYGGRVLHEQSHGESFLSLVL
                     DRLRGNGVYLFDEPEAALSPARQLALLAAMHRLVQRNSQFIIATHSPILLGFPGATIY
                     VFAEKRLSQIAYLDTEHYQITKAFLDRPERMLNELFRADEPSDT"
     gene            complement(3477..3872)
                     /locus_tag="VGQ24_16860"
     CDS             complement(3477..3872)
                     /locus_tag="VGQ24_16860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456567.1"
                     /translation="MPRLFTAIVLPLLLAPSLGVAQRLDIRAQSTSVTRLSSGEGTRG
                     HFWAGAGIGLLGGALIGGVIGSTTELCLDSCTAAQARTGAITAGVIVGGAAGFLLGGV
                     IGALIRSDRSSISVGPRLDAPGLIVDVRF"
     gene            complement(4039..>4601)
                     /locus_tag="VGQ24_16865"
     CDS             complement(4039..>4601)
                     /locus_tag="VGQ24_16865"
                     /inference="COORDINATES: protein motif:HMM:NF019113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase family 88 protein"
                     /protein_id="HEV8456568.1"
                     /translation="MDRLWWKTTDYLHDKRERLFYRDSRFFDRREPNGKKVFWSRGNG
                     WVLAGLARVLQYLPPDYDGRIRFVALFHEMAQRIADLQGPDGYWRASLLDPDSRPNPE
                     TSGTGFFTYALAWGMNEGVLGREYERVVRRGWSALVRALQPSGKLGYVQRVGDAPGDT
                     GPEQTEMYGTGAFLLAGSEILRLASR"
BASE COUNT          807 a         1518 c         1530 g          746 t
ORIGIN      
        1 gactgctcgg ccggcagctt ggtcaagaga aaccgctcgc cgtcacgcga gacgtcgtag
       61 ctgcgcgggc gggtccaccc ggggctgtcg ggatacggac caccgaacag ggctctgggc
      121 gcgctactcc ggccgttctg caggtcgacg ctcaccgtca tcatgctgtc acccttccgg
      181 tacaccagct cccgcccgcc tctggtccac atcggctccg acccgttggc cggagagacc
      241 ttccagcgct tgaggctcgg gttgggatac gattgggcgt atacctcgac acgccccgac
      301 tcgtcggaat cgtaggccat ccagcggccg tccggcgaca gcgtggcgtg ggcgaggttg
      361 aagccgttgg cgaagtagcg cgccggcgcg ggcgggcccc ggagcttcac ggtccagagc
      421 tcgccgcccg gggcggcgag cgagaaggcg aacagtcggc cgtccgagga gaccgagccg
      481 gggtaccgat cgaacccccc cgtcaagagc ggctccgcgg gccggctcgc gtccgccgcc
      541 cggcgataga gatcgaagaa cgggtgctcg ctcgagtaga tcagctcccg accgtcgggt
      601 gtccactcgg cgccgaagtc cctgccgccc tcggcggtga gcctgagccc gcccgagcgg
      661 cccacctgga agacccagat gtctcccaga gagttagccg agcgaatgtc caccgcgatc
      721 cggcctccct cgggcgagag gcgcgggtgg tcgtaacggt cgctggcggg aagcgcgcgc
      781 gattcgtttc cccgccggtc caccagcacc agctcggtct ccctgatgta ggagctgacc
      841 ggcaggtacg ccaatgtccc attctccgac acgtcgaatg ccgcggcgcc atcggtgggg
      901 ttcatggcca cgctatcgac gacgggaagt gccgcgccgg tcacggcaag gcggtccaag
      961 tcgaacggga cggcccggat ggtctcgccc accgcgtaga gcagatgccc cgtaggcacg
     1021 tagaaaccga agacgccacc ggtaaatacc acgtcccgct tgccggagct gatcgagagg
     1081 acctcgatgg tggcccgctc gatcggcgtg cggtatgcgg tgaacagcac gtgatcgccg
     1141 tcgggcagga tctgcggcca ccaatgaccc agctcaccgc gcgcggtgtc cggcgtggtg
     1201 agcatgcgct cgtcgcctcc gccctcactc acgatccaga gaccggtgtt gtacgccttg
     1261 gtgtagacca gcttgccgtt ccttccccaa ctgccgccgg cccagtcggc cacggcgagg
     1321 tcgatcgcgg ggccgccctc cacgcggacc tttctgagct ttccctggcg tgcataggcg
     1381 atccattgtc cgtcgggcga aacgaacggc cggctgttgc ccgtcccctg ctctccctgg
     1441 ccggcacccg cgatcacctc catgcgcatc tggtcgaacg gacggcgcag gacctcttcc
     1501 cgccggccga ccatcgcgga cacgaagagc tggcggccgt ccgggctcag gcgcacgatc
     1561 ggcgtgaagg tgggttgcac tcccgggtcc agctcgatgc tgaagcgcac cggggccgcg
     1621 gaggggagcg cgcctcgccc attacggagg cccacccaag cgaccgtgag caggagcgcg
     1681 gccgacagcg cccacgggat cgcggaccga ccgagcgcac ccgatagcct gtgacctcgg
     1741 gccttgtggc ccgcgcccgc accggtcaac gccgcggcga actccgccgc cgtctgccag
     1801 cggtcggcgg gaagcttctc gagcgcgcgc gcgacggcgg catcgacatg tggcgggacg
     1861 gtcttgcggt gaaagaccac cggcctgggc tcctccgaca tgacccgggc gaagatcgcc
     1921 tgcggcgtca gtccggtgaa cggtggttgg ccggccagca tttcgtacag gaccacgccg
     1981 agggcgtagg tgtccgcccg cgggtccagg ttctggtccc cggccgcctg ttcgggactc
     2041 atgtagtgag gagtgccgag actcacgccc gacttggtga ttcgagtcct gccgtccctg
     2101 tggctccagg ccagcgcaat gccgaagtcg gccaccaggg cccgaccgtc gtggagcagc
     2161 acgttgtcgg gcttgatgtc gcggtggatc acgccatggc ggtgggcgta atcgagggcg
     2221 ccggcgatct cgacggcgat ccggacggca tccgcgacgg gcagctggac ctcacgggcg
     2281 aggcggccgc ggagcgattc gccctggacg tacggcatga cgtagaacac cgtgccgccg
     2341 acctccccgg aatcgaacag ggggaggatg ttgggatgct gcaggttggc ggtagtctcg
     2401 atctccttaa ggaaccgtgc ggcgccgatg atggccgcga gctccgaatt catgaccttg
     2461 atggcgactt tgcgattgtg gcgcgggtcg tgggcgaggt atacggtggc catgccgccg
     2521 gcgcccagct cgcgctcgag cgtgtagcgg tcggccatgg cttccttcag gtgatcgaac
     2581 ggatcagcca tgaagtcaag atatggagcg actgagggcg cggcgagtgg ttacgtgtcc
     2641 gagggctcgt ccgctcgaaa cagctcgttg agcatgcgct ccggtcggtc caggaatgcc
     2701 ttggtgatct ggtagtgctc ggtgtcgagg taggcgattt gtgacaaccg cttctctgca
     2761 aagacgtaga tggtcgctcc cggaaatccc aagaggatcg gggagtgggt cgcgatgatg
     2821 aactgcgaat tgcgctggac caggcggtgc atcgcggcca agagggccag ctggcgggct
     2881 ggagacagtg cggcctccgg ctcgtcgaac agatacactc cgttgccgcg gagccgatcg
     2941 agcacgagag acagaaaaga ctccccgtgc gattgctcat gcaggacgcg gccaccgtac
     3001 tgatcgacat ctcgggggtc catcgccgac gccacattgt agaacgactc ggccctcaag
     3061 aaatacgagt ccgtgggcgc gtcgcggctc ttgttgagga tcagcgcgcg gaacagctcc
     3121 gaatgcgtgg atcgtgtggt gaaccgctcg tgcttcgtgc cgccttccgg attcaatcca
     3181 aacgctgcgg cgattccctc gagcagcgtg gatttcccgg agccgttctc cccgacgaaa
     3241 aacgttaccg gtgttacgaa tttcagctcg gtgagatgac gaatggcggg taccgagtag
     3301 ggatagtctc gcggcgcggc gccgagcaca ccctcgcggg caacggcctg gatgaagatg
     3361 ccgggaaccg tgggcgccag tttgggacgg tgctttttcg tctccggaat ccccttcacc
     3421 cgcgcgccgc tgcaccgcca gtggtctact cccgctgtcg gaggcagcca ggtcgactag
     3481 aacctgacat ccacaataag cccgggggcg tccagacgcg gacccacgct aatgctcgac
     3541 cggtcggacc gaattagcgc gcctatgacg ccaccgagca gaaaccccgc cgccccgccg
     3601 acgatgaccc cagccgtaat cgcgccggtt cgggcctggg ccgcagtgca gctgtcgagg
     3661 caaagttccg tagtcgaccc aatcacaccg ccgatgaggg caccgccaag cagaccgatg
     3721 ccggcgcctg cccagaaatg gcccctggta ccctctccac tcgagaggcg agtaacagag
     3781 gtcgattgcg cgcggatgtc cagcctttgg gcgacgccca ggctcggcgc aaggagcagg
     3841 ggcaggacga tggccgtgaa gagacgaggc atgagaaacc tccgtggaaa gtgcttgtca
     3901 agcaggcgcg aacaaaaaaa accagccaag cgactgcgcg ctcagccggt ttcgcgattt
     3961 gctccctcga ggcatgggcg acgatccgag gggttgcaat atgcaccggg gccagcggcc
     4021 ggcaagggcg gggggctgct accgggaagc cagtcgcaag atctcactgc ctgcaagcag
     4081 gaacgcccca gtgccgtaca tctccgtctg ctctggtccc gtgtcgccgg gcgcatctcc
     4141 cacgcgctga acgtagccga gcttgccgct tggctgtagg gcccgaacca gtgccgacca
     4201 tccacgtcgt accacgcgct cgtattcgcg cccaagcaca ccctcattca tgccccacgc
     4261 aagcgcgtac gtgaagaaac ccgtcccgct ggtctccggg ttcggccggc tgtctggatc
     4321 aagtaagctt gcacgccaat agccatccgg tccttgcaag tcagcgattc gttgcgccat
     4381 ctcgtggaat aaggcaacga agcggattcg cccgtcatag tccggaggca agtactgcag
     4441 cacgcgcgcg agacctgcaa gcacccagcc gttccctcga ctccagaaca ccttcttgcc
     4501 gttgggttcg cgccgatcga aaaaccggct atcgcggtag aacaatcgct cccgtttgtc
     4561 gtgcaggtag tccgtggtct tccaccagag ccggtccatg a
//
LOCUS       DASYRV010000638        10735 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3932634, whole genome shotgun sequence.
ACCESSION   DASYRV010000638 DASYRV010000000
VERSION     DASYRV010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10735
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3932634"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..361
                     /locus_tag="VGQ24_16870"
     CDS             122..361
                     /locus_tag="VGQ24_16870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456569.1"
                     /translation="MRKLTLAVAFAALWTLSGCKKTGEGQYEVQKPVVGTETDTVNTP
                     SVETGTVKDTINVPTVGTEKKEVTLPKVEVKKPKE"
     gene            512..901
                     /locus_tag="VGQ24_16875"
     CDS             512..901
                     /locus_tag="VGQ24_16875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456570.1"
                     /translation="MFVVRLALASTVLLALTPGCGLLSSRHPKPSDPAAGTKVLVEVE
                     SHNWNDITVYLLAGGLPQRLGMVSALSSATFDFSSHRLNTSAGVRLRALPVAGKPFTT
                     ETILVHPGQVITWTLENHLDASSFSVY"
     gene            1155..3956
                     /locus_tag="VGQ24_16880"
     CDS             1155..3956
                     /locus_tag="VGQ24_16880"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEV8456571.1"
                     /translation="MMRAVVRIIVGLVLTLPGPLMAQGGAIRGSVADSSGSPLPNASI
                     TVEGTGLRTTSGSQGDYELRGVPAGRQTVRARLIGYRSASAAVTVVAGDATPQDFTLG
                     RSAVQLAPIDVVIGSRARHTAAEELAVPVDVFPAEELQQQGSSETSVILQAVAPSINF
                     PRQTVTDAGDIVRPFTLRGLSPDHTLVLLNGWRRHQTAVVNSFNYGMGAGSSGVDLNA
                     LPSGALDRIEVLRDGAAAQYGSDAIAGVVNLVLKDGVFSPFVNGDVGRYTTDDYPDDG
                     TTVTVNGGWGIPLGRGSLGVFGEFRDRQPTNRAWADPFEDAGTSVTDSINDKGQVVQK
                     RNPVPQPNTHWGDGLEKDVLTFANFRMPVNEAGSSEIYSFGGYSHRDGTGNGYRRTAG
                     NNRNWREIYPLGFLPEINGKPTDYSAAGGLRGLVSGWNYDLGAEFGHNHFDYNIRNTL
                     NASLGPCLAVPCAPGPDRTLGTADDPGIPNQLSFFAGRVLREEFVTALNVARPVSIGL
                     PAPVNLALGAAFRRERYAIREGELASYINGFHLDQDSVDVAASGSSVFPGFTPDDATD
                     RNRTNFGIYADAETNLTPQVLADVAARFERYSDFGSRLTGKVAVRYQPTERVTFRAAA
                     STGFRAPGLSQIAFGKVTTNVIEGEFIDVGVLPVDHPAAIALGSRPLEEETAFNFSGG
                     VAVTPVENLTITADYFHIRIDNQILLGATFDDDATLAILSGAGFGFDAVQYFTNGLDT
                     QAQGVDVAGNLRVPAGPEGTLDLTASFNVTRNKIRNVDPLPQVLIDAGSTEPGLLDSV
                     TVIGIEDERPDWRGTLQANLTVSRLSALGRVSYFGGFSSAQPGFCDLCRENYGGKGLV
                     DAELGYRFNLIKLAVGVRNLFDTYPDQPSSPVVVDDETGDRALDYNNNFGTFPWAAAS
                     PFGYNGRFVYARTEIQLSP"
     gene            4024..5637
                     /locus_tag="VGQ24_16885"
     CDS             4024..5637
                     /locus_tag="VGQ24_16885"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEV8456572.1"
                     /translation="MSASYDLIVVGGGHNGLVTAAYAARAGLKVLVLERREVLGGACV
                     TEELWPGFKVSTAAYVNSLLRPEIIRDLELKRHGFKMLPRNPSSFTPFPDGRSLMLGP
                     NRPMTHREISKFSAKDAEALPKYEQMLERVASFLEPTLVQTPPNPWSFRPGNLLQLAK
                     LGMGFAKLGTDGQKAIEILTGAATPILDRWFESEQLKVTLATDAIIGAMASPSMPGTA
                     YVLFHHVMGECDGIRGVWGYVRGGMGGISNAIAASAREKGAEIRTSAEVLRILVKNGE
                     AVGVVLKDGTEIRARRVASGVDANVTFLKLVGSSELPPEFVEAVRNIDYSSASLKINI
                     SLSELPDFTSVPGTAPGLQHRGTIHISPSMDYIERAYDTAKYGCPSEYPIIEATIPSV
                     LDDTVAPEGKHVMSMFTQYFPYKLAPGLSLQEEKEKYAERCFDLMNEYAPNFRRSVIG
                     RQVLSPVDLEKRFGLTGGNIMQGSMSLSSLSFMRPVPGYADYRTPIRGLYLCGAATHP
                     GGGVMGACGYNAAREILRDARRRAPKAPA"
     gene            complement(5667..6788)
                     /locus_tag="VGQ24_16890"
     CDS             complement(5667..6788)
                     /locus_tag="VGQ24_16890"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEV8456573.1"
                     /translation="MTQFLKTTQIAIDGAKTLPRRYYVEPAIFVEEQERIFTRRWLCV
                     GREDRIPSPGDYFLQQVGNESIIVLRDRAGTLRAYYNVCRHRGTRLCEEPSGQFSETI
                     QCPYHAWTYALDGRLIGAPSSGDIEGFSKADYPLHGVAVRSWEGFLFINLDRDPEPFA
                     KAFERLLRRFTRFNLPNLAVARTIEYDVRANWKLLFQNYSECYHCGPVHPPLAKLTPP
                     TSGENDLTDGPFTGGFMVINEGHQSLTMTGRSCGLMVGDLPEEDLNRVYYYAIFPNML
                     LSLHPDYVMYHTLWPEAPDRTRILCSWLFHPDTLTDPTWDPEDGIQFWDMTNRQDWHI
                     CEQSQLGVQSRVYQPGPYSKREALSVQFDREVLKALGER"
     gene            6969..7373
                     /locus_tag="VGQ24_16895"
     CDS             6969..7373
                     /locus_tag="VGQ24_16895"
                     /inference="COORDINATES: protein motif:HMM:NF023514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3568 family protein"
                     /protein_id="HEV8456574.1"
                     /translation="MTIKSVAPAKWALALALILPVTGCVAAAAAAGAGAGIYLTTRGA
                     ESIVESSVDQVAARARAVMAEEGIVPDEASMEQGGDKREFKGKKGDLDVTIEIERKSS
                     KTTRVEVTARKNLAEWDKEYAQQLLSRIVEKG"
     gene            7376..7789
                     /locus_tag="VGQ24_16900"
     CDS             7376..7789
                     /locus_tag="VGQ24_16900"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEV8456575.1"
                     /translation="MPDLRGVLETSLYVADLERSRLFYSHLFGFPVLVQDTRFCALDV
                     GGRQILLLFRTAATTTPMETSRGVIPPHGGSGQLHVAFAMDNGELEAWEQRLIEDHIP
                     IESRLTWPRGGISLYFRDPDGHLLELVTPGVWATY"
     gene            complement(7783..9102)
                     /gene="fahA"
                     /locus_tag="VGQ24_16905"
     CDS             complement(7783..9102)
                     /gene="fahA"
                     /locus_tag="VGQ24_16905"
                     /EC_number="3.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004334 - fumarylacetoacetase activity
                     [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetase"
                     /protein_id="HEV8456576.1"
                     /translation="MNQTHDPGRTSWVESAGGHTDFPIQNLPYGVFRRRGTASLPAVG
                     VAIGNEILDIGAARAAGGLTERVAVTAQACTRPTLNPLMALGREHWSALRAEVSALLA
                     SDSPAYRVDRHIGQRILLPASEAELFLPAQVGDYSDFYASVYHATNVGSMFRPENPLL
                     PNYKWVPIGYHGRASSIVVSGTPVRRPCGQIKEAEGESPAFGPTRALDYETEVGCFVG
                     PGNSLGQPVPIDQAENHLFGLCLVNDWSARDIQSWEYQPLGPFLSKSFATTVSPWVVT
                     LEALEPYRIPAFHRPPGDPAPLAYLDSPATQSRGGLDLTVEVYLATAWMREAGLQPLR
                     LSRGNAADLYWTLGQMLTHHASNGCNLRPGDLFATGTISGPAKDSRGCMLELTWRGSE
                     PLAIPTGETRKFLEDGDEVILRASCERQGSARIGFGECRGIVIPALQ"
     gene            complement(9099..10115)
                     /locus_tag="VGQ24_16910"
     CDS             complement(9099..10115)
                     /locus_tag="VGQ24_16910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456577.1"
                     /translation="MTITPANRLPSMIDLNATTFQQINAKAAGTTSLNMNAIHTLLRQ
                     SIDYAGLFPPAGLGMRAAVANYLRYRAGPEAWALGRFIVPATRLAEFEEAAGDSSSNW
                     AGGQPWQLSALVGPDLAGDLDQITGFQRRQGGTAQSMTVDTIETKADTVSTIQETMRR
                     IPGRLQVYFELPIEHDLTDLLATVARVGARAKVRTGGVTPEAFPSTGSLARFIHACVR
                     AKVPFKATAGLHHALRAEYRLTYEDDSGTCVMFGFLNLFLATALARNGIGERDTYGIL
                     EESSPAAFRVDDAAIAWRDQRLDRRALGHSRESIVSFGSCSFTEPVAELQSLHWLEPK
                     VQQA"
     gene            10197..>10735
                     /locus_tag="VGQ24_16915"
     CDS             10197..>10735
                     /locus_tag="VGQ24_16915"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEV8456578.1"
                     /translation="MTIASINPATGQMIRTFPTLSDQELDARIQCAADAYARYRRTPI
                     QERTRRLLRAAEILEREKEDFGRLMVTEMGKTLKAAVEEAAKCAWGCRYYAENAEHFL
                     ADEAVETGTSQTFIVYQPMGPILAVMPWNFPFWQVFRFAAPALMAGNVGLLKHASNVP
                     GCALAIEEIFRAAGAPEGA"
BASE COUNT         1924 a         3419 c         3483 g         1909 t
ORIGIN      
        1 cccctcactt ctccaggccc ccgtgatgcg caacacaggc tattccgcac ctccacggca
       61 tattcgcgta cggaattttg attgttccac caggcactag tctctcaacc ggaggtcact
      121 cgtgcggaag ctcacgctgg ccgtagcatt cgctgcgctt tggacgctca gtggatgcaa
      181 gaagacgggc gaagggcagt atgaagtgca gaagccggta gtcggcaccg agacggacac
      241 ggtgaatact ccgagtgtcg agaccggtac ggtcaaggac acgattaacg tgcccacggt
      301 cggaaccgag aagaaggaag tgaccttgcc caaggtcgag gtcaagaagc ccaaggagta
      361 ggttcgccct cctgaaaacc cagagatata ttgggcacac ccgcggggtt gatcttcccc
      421 gcggggcggt accttcacgt gctccggagt caacaggttg cgcttcggct cgggccctcg
      481 cggccgctga aagggcccga aagtcgacac catgttcgtc gttcgcctcg cactcgcttc
      541 taccgtgttg ttggccctga cccccggctg tggtttgctc tcctcgcgac acccgaagcc
      601 ctcagatccg gcggcaggaa ccaaggtcct ggtggaagtg gagagccata attggaacga
      661 catcaccgtg tacctgctcg ctggaggact ccctcagcgc ctcgggatgg tatctgcctt
      721 gagcagcgcg acgtttgact tttcgtccca ccggctgaat acgagtgccg gcgtgcgact
      781 gcgggcgctt ccggtagcgg ggaagccgtt taccacggag actattctgg tacaccctgg
      841 gcaggtgatc acctggacac tggagaacca cctcgacgcc tcgagtttct ccgtgtactg
      901 acccgccgca catctttttc ctattgacac cctcccggtt tgaccgcacg tttgcgcagg
      961 ccgtcagcca tgaccggctt ccgctctcca gtcaattcgg atctcgccac gccttctccg
     1021 tggcgtccgc gcatcccgcg ctacacgcgg gtcgcaacct tcgctcagag agctcacatg
     1081 gcctgatctc caccgaccgt ttgatcctcg caccgcccgg gtgctcggcc gaaggtcaac
     1141 tctaaggggg tcttatgatg cgagctgttg tccggataat cgtgggcctg gtgctgactc
     1201 tacccggtcc actcatggca cagggcggcg ccatccgtgg gagcgtagcc gatagcagcg
     1261 gctcaccact tcccaacgcg tcgatcactg tcgagggcac cggcctccgt accacgagcg
     1321 gcagccaggg ggactacgag ctccgcggcg tcccggccgg ccggcagacg gtgcgggctc
     1381 gcctcatcgg ctatcgctcc gcgagcgctg cggtgacggt ggtggcgggg gacgcgacgc
     1441 cccaggactt caccctcggc cggagcgccg tgcagctggc cccgatcgat gtggtcatcg
     1501 gctccagggc gcggcacacc gcggccgagg agctggcggt accggtagac gtgtttcccg
     1561 ccgaggaact ccagcagcag ggcagcagcg agaccagcgt cattctccag gcggtggccc
     1621 cgtcgatcaa cttccccagg cagaccgtga ccgatgccgg cgacatcgtc cggccgttca
     1681 cactccgggg gctcagcccg gatcacacgc tggtactgct taacggctgg cggcggcacc
     1741 agaccgcggt ggtcaacagc ttcaactacg gcatgggcgc gggctcgagc ggcgtggacc
     1801 tgaacgctct tccctcgggc gcgctcgacc ggatcgaggt gctccgcgac ggagcggcgg
     1861 cacagtacgg gtctgatgca atcgctgggg tcgtcaacct ggtgctcaag gatggcgtct
     1921 tctctccctt cgtaaacggc gatgtggggc gctacaccac cgacgattac cccgacgacg
     1981 gcaccacagt caccgtcaac gggggatggg gcatcccgct gggcagggga tcgctggggg
     2041 tgttcggcga gttccgggac cggcagccca ccaaccgggc ctgggccgat ccgttcgagg
     2101 atgccggcac cagcgtcacc gactcgatca acgacaaggg ccaggtggtt cagaagcgca
     2161 atcccgtgcc gcagccgaat actcactggg gcgacgggct ggagaaggac gtgctgacct
     2221 tcgccaactt ccgcatgcca gtcaacgagg cggggagcag cgagatctac agcttcggtg
     2281 ggtacagcca ccgggatggg accgggaacg gttaccgccg gaccgccggc aacaatcgaa
     2341 actggcggga gatctatccg ctgggctttc tccccgagat caacggcaag cccaccgact
     2401 actcggcggc gggtggcctg cggggtctgg tgtccggctg gaattacgac ctaggcgccg
     2461 agttcgggca caaccacttc gactacaaca tccgcaatac cctcaacgcc tcgctcggcc
     2521 cgtgcctagc cgttccctgc gcgccaggac cggaccggac gcttggcacg gcggacgatc
     2581 ctgggattcc caatcagctg tccttcttcg ccggcagggt gttgcgagag gagttcgtga
     2641 cagcgttgaa tgtggcccgg ccggtgagca tcggtcttcc ggccccggtg aacctcgcct
     2701 tgggcgcggc gttccggcgc gagcgatatg ccattcgcga gggtgagctg gcctcctaca
     2761 tcaacgggtt ccacctcgat caggacagcg tggacgtggc tgccagcggc tcgtcggtct
     2821 ttcccgggtt caccccggac gacgccaccg accggaaccg gaccaacttc gggatctatg
     2881 ccgacgccga gacgaacctc acgccccaag tgctggccga tgtggcggcg cggttcgaac
     2941 ggtacagcga cttcggctcg cgactcaccg gaaaggtggc ggtgcggtat cagcccaccg
     3001 aacgggtgac gttccgcgcg gccgcgagca ccggtttccg ggccccgggg ttgagccaga
     3061 tcgccttcgg caaggtcacc accaacgtga tcgagggcga gttcatcgac gtcggggttc
     3121 tcccggtgga ccatccggcc gcgatcgcac tcggctcgcg gccgttggag gaggagacgg
     3181 cgttcaactt cagcggcggg gtggcggtga ccccggtgga gaacctcacc atcacggccg
     3241 actacttcca catccggatc gacaatcaga tcctgctggg agccaccttc gacgacgacg
     3301 cgacgctggc gatcctgagc ggcgccgggt tcggcttcga cgccgtccag tacttcacca
     3361 acgggctgga tacccaggca cagggtgtgg acgtcgccgg caaccttcgc gtgccggccg
     3421 ggccggaggg cacgctcgac ctcaccgcct cgttcaacgt cacccggaac aagatcagga
     3481 acgtcgatcc gctgccgcag gtcctgatcg acgccggctc caccgagccc gggctgctcg
     3541 actcggtgac cgtaatcggt atcgaggacg agcgccccga ttggcgggga acgctgcagg
     3601 ccaacttgac ggtcagccgg ctcagcgcgc tggggcgcgt gtcctacttc ggcggcttct
     3661 cctcggcgca gccgggcttc tgcgatctct gccgggagaa ctacggaggc aaggggctgg
     3721 tcgacgcgga gctgggctac cggttcaacc tgatcaagct ggcggtcggg gtacggaatc
     3781 tgttcgacac ctatccggat cagcccagct cgcctgtcgt ggtggatgac gagaccggcg
     3841 acagggcgct ggattacaac aacaactttg gcaccttccc gtgggcggcg gcgtcgccgt
     3901 tcgggtacaa cgggcggttt gtctacgcca ggacggagat tcagctcagt ccataaccct
     3961 cccctctcct agcgccatcc tccggggcgg cgctaagata cgccttcttt acctcaggcg
     4021 atcatgtccg cgtcttacga tctcattgtt gtcggcggcg gtcacaacgg tctcgtgacc
     4081 gctgcctacg ccgcgcgtgc cggcctcaag gtcctcgtgc tggagcggcg cgaggtgctt
     4141 ggcggggcct gcgtcaccga agagctgtgg cccgggttca aggtgtccac cgcggcctac
     4201 gtcaatagtc tcctccgccc ggagatcatc cgggatctcg agctcaagcg gcacggcttc
     4261 aagatgctgc cgcggaatcc atcctcgttt acgccctttc ccgatgggcg ctcgctcatg
     4321 ctggggccta acaggccgat gactcaccgg gagatctcca agttctcggc gaaggatgcg
     4381 gaggcgctgc cgaaatacga gcagatgctg gagcgggtgg cgtcatttct cgagcctacc
     4441 ctcgtccaga ctccgccgaa cccgtggtcg ttccgtccgg ggaatctcct gcagctggcc
     4501 aagctgggga tggggtttgc caagttgggc accgatggtc agaaggcgat cgaaattctc
     4561 accggcgcgg cgaccccgat cctggatcgc tggttcgagt cggagcagct caaggttacg
     4621 ctggccaccg acgcgatcat cggtgccatg gcgtcgccct cgatgccggg caccgcctac
     4681 gtgctcttcc atcatgtcat gggggaatgc gatggcatcc gcggcgtgtg gggttacgtc
     4741 cgtggcggga tgggaggaat cagcaacgcg atcgcagcat ccgcccggga gaagggagcg
     4801 gagatccgca ccagcgcgga agtgctccgc attctggtga agaatggcga ggccgtgggg
     4861 gtggtgctca aggacggcac cgagatccgg gcccggcgag tggcgtcggg cgtggacgcg
     4921 aacgtcacct tcctcaagct ggtgggcagc tcggagctac cgcccgagtt cgtcgaggcc
     4981 gtgcgtaaca tcgactacag cagcgccagc ttgaagatca acatctcgct cagcgagcta
     5041 ccggacttta cctcagtgcc ggggaccgcg ccggggctgc agcacagagg gacgatccac
     5101 atctcgccga gcatggacta cattgagcgc gcgtacgaca ccgccaaata cggctgtccg
     5161 tcggaatatc cgatcatcga agccaccatt ccgtcggtgc tcgatgatac ggtggcgccc
     5221 gagggcaagc acgtgatgtc gatgttcacc cagtacttcc cctacaagct tgcgcccggg
     5281 ctctcgttgc aggaggagaa ggagaaatac gccgagcgct gcttcgacct gatgaacgag
     5341 tacgccccca acttccgccg ttccgtcatc ggccggcagg ttctctcgcc cgtggacctg
     5401 gaaaagcgct tcggattgac cgggggcaac atcatgcagg gatccatgtc tctcagcagc
     5461 ctctcgttca tgcgcccggt ccccggttac gccgattacc gtacgccgat ccggggactc
     5521 tacctgtgcg gtgcggcaac gcatcccggg ggaggagtga tgggagcctg cggctacaac
     5581 gccgcccgcg agattctgcg cgacgccaga cggagagctc ccaaagctcc agcctagctg
     5641 cctggcccca ggcagactcc cgactcctac cgctccccca gcgccttcaa gacctcccga
     5701 tcgaactgga ccgagagtgc ttcccgcttg gagtagggcc ccggctgata cactcgcgac
     5761 tggacgccca gctggctctg ctcgcagatg tgccagtcct gccggttggt catatcccag
     5821 aactgaattc catcttctgg gtcccaggtc ggatcggtca gcgtatcggg atggaagagc
     5881 caggagcaga gaatccgggt acggtccggg gcctccggcc acagggtatg gtacatcacg
     5941 tagtccggat gcaggctgag aagcatgttg ggaaatatgg cgtagtagta aacccggttc
     6001 agatcctcct cgggcaggtc gccgaccatg aggccacagg atcgtccggt catcgtcagg
     6061 ctctgatggc cctcgttgat gaccatgaat ccgccggtaa aggggccgtc ggtcagatcg
     6121 ttctccccac ttgtcggagg agtcagcttg gccagaggag gatgcaccgg gccgcagtgg
     6181 tagcactcgg agtagttctg gaacagcagc ttccagttag cccggacgtc gtactcgatg
     6241 gtgcgggcca cagccagatt cggcaggttg aagcgggtaa aacgtcggag tagccgctcg
     6301 aacgccttgg cgaacggctc cggatcccga tccaggttga tgaagagaaa tccttcccag
     6361 ctccggactg ccacaccgtg gagtgggtag tcggctttgc tgaacccttc gatgtctcct
     6421 gacgatgggg ctccgatcaa gcggccgtcg agtgcgtagg tccacgcgtg gtaggggcac
     6481 tgtatcgtct cggagaactg gccgctgggc tcctcgcaca ggcgggtgcc ccggtggcgg
     6541 caaacgttgt agtacgcccg gagcgtgccg gcgcggtccc gcagcacaat gatgctctcg
     6601 tttccgactt gctggaggaa gtagtcccct ggcgacggaa tccggtcttc ccgccctaca
     6661 catagccagc ggcgggtgaa gatccgttcc tgctcctcca caaagatcgc gggttcgacg
     6721 tagtagcgtc ggggcagcgt tttggctccg tcgatcgcga tctgggtggt cttcaggaac
     6781 tgggtcacgc aagcctcggc tggaattctg attgctgaat aatggagccc ggcggaccgg
     6841 gaaggaaggc agggttgacg gggattacgg cggcttggtg atccaagggg tggagaacct
     6901 cgggctgcgt acctaaactg aggcgctgtc cgtgcatacg attttccacc ggagatggag
     6961 gtcacgatat gacgatcaag tcggtagcgc cggccaagtg ggcgctcgcg ctcgcgctca
     7021 ttctcccggt aacgggatgc gtggcggctg cggcggccgc cggtgcgggg gcgggtattt
     7081 acctcaccac acgcggggct gaatccatcg tcgaaagctc ggtcgatcag gtggccgcgc
     7141 gcgcgcgtgc cgtcatggcc gaagagggaa tcgtgccgga cgaggcgagc atggaacagg
     7201 gcggcgacaa gcgcgagttc aagggcaaga agggtgacct cgacgtcacc attgaaatcg
     7261 agcggaagag ctcgaagacg acccgggtcg aggttaccgc acgcaagaac ctggctgaat
     7321 gggacaagga atacgcccag caactgttgt cgcggattgt agagaagggc tgacgatgcc
     7381 cgacctccgg ggcgtgctcg agacctcctt gtatgtggca gatctcgagc gctcccggct
     7441 cttctatagc cacctcttcg gctttcccgt tctcgtccag gacacccgct tctgtgccct
     7501 ggacgtgggc ggccgtcaga tactgctgct gttccgaacc gccgccacta ccacacccat
     7561 ggagacatct cgaggcgtca tcccgcccca cggtggcagc ggacagctcc acgtcgcgtt
     7621 cgccatggac aacggcgagc tggaggcgtg ggagcagcgt ctaatcgagg accatatacc
     7681 gatcgaaagc cgactcacgt ggcccagggg cggaatcagc ctctacttca gggatccgga
     7741 cggccacttg ctggagttgg tcacccccgg ggtctgggcg acctactgaa gagccggaat
     7801 cactattccc cggcactcac caaaaccgat ccgggcagag ccctggcgct cgcacgacgc
     7861 gcgcaggatc acctcgtctc catcttcgag gaacttgcgg gtctccccgg tcggaatcgc
     7921 gaggggctcg cttcctcgcc aggtcagctc cagcatgcaa ccccgcgagt cctttgccgg
     7981 cccggagatc gtaccggtgg cgaacaggtc gcctggcctg agattgcatc cattgctggc
     8041 atggtgggtg agcatctgcc ccagagtcca gtagaggtcg gcagcgttgc ctcgactcaa
     8101 ccggagcggc tggaggcccg cctcacgcat ccaggccgtg gccaggtaca cctccacggt
     8161 caggtcgagg ccaccacggc tttgggtggc cggcgagtcc aggtaagcaa gtggcgcggg
     8221 atctcccggc gggcggtgga aggccggtat ccggtaaggc tccagtgcct ccagtgtcac
     8281 cacccagggc gagaccgtcg tagcaaagct cttggacagg aaggggccga gtggctggta
     8341 ttcccagctc tggatgtcgc gagctgacca gtcgttcacc aggcataagc cgaagagatg
     8401 gttctccgcc tggtcgatcg gcaccggctg acccagggaa tttcccggcc ctacgaaaca
     8461 tcccacctcc gtctcgtagt ccagtgctcg ggttggtccg aaggccggag actcgccttc
     8521 ggcctccttg atctggccgc agggtcgccg caccggcgtt ccgctcacca cgatggatga
     8581 ggcacgtccg tgatacccga tgggcaccca cttgtagttg ggaaggagcg gattctcggg
     8641 ccggaacatg ctgccgacat tggtagcatg gtacaccgat gcgtagaaat cgctgtagtc
     8701 gccgacctgg gcaggcagga agagctcagc ctcgctcgca gggagcagga tgcgctgccc
     8761 gatgtgtcgg tcgacccggt acgccggcga gtcggacgcg aggagggcac tgacctcggc
     8821 ccgtaaagcg gaccagtgct cccggccaag tgccatcagg gggttgagcg tcggcctggt
     8881 acacgcctga gctgtcaccg ccacgcgttc tgtcagaccg ccggcggcac gggcggcgcc
     8941 gatatcgaga atctcgtttc cgatcgcgac ccctaccgcc ggcaagctcg cggtcccgcg
     9001 ccgccggaaa acgccataag gcaggttctg aatcgggaag tcggtgtggc ccccagcgga
     9061 ctccacccag gaggtgcgcc ccggatcgtg agtctggttc acgcctgctg cactttaggc
     9121 tcgagccagt gaagggactg gagctccgcc actggctcgg tgaaggagca ggagccaaac
     9181 gagacgatcg actcccgcga gtggcccagc gcgcgccggt cgagccgctg gtcccgccag
     9241 gctatcgctg catcatccac ccggaaggcc gccggcgacg actcttccag aatgccgtac
     9301 gtatcgcgtt cgcctatgcc gttccgtgcc agggccgttg ccagaaacag gttgagaaag
     9361 ccgaacatca cgcatgtgcc gctgtcgtcc tcataggtca gccggtactc ggcccggagc
     9421 gcgtggtgta gcccggccgt ggccttgaat ggcaccttgg cacgcacgca cgcgtggatg
     9481 aaccgagcga ggcttcccgt ggaagggaat gcctcggggg tgacaccgcc ggtcctgacc
     9541 tttgcgcgcg cgccaacccg ggcaacagtc gccagaaggt cggtgagatc atgctcaatg
     9601 ggcagctcga aataaacctg aagccggccc ggtatcctgc gcatggtttc ctggatggtg
     9661 ctcaccgtgt ctgccttcgt ctcgatggtg tccaccgtca tactctgggc cgtgccccct
     9721 tggcgccgtt ggaagccggt gatctggtcc aggtcaccgg caaggtccgg ccccaccagc
     9781 gcgctcagct gccatggctg gcccccggcc caattggagg agctgtcgcc ggccgcttcc
     9841 tcgaattcgg ccaaccgggt ggccggcacg atgaaccgac caagggccca ggcctccggt
     9901 ccggcccggt agcggaggta gttagcgacg gctgcgcgca tgcccagccc agccggaggg
     9961 aacaggccgg cgtagtcgat gctctggcgg agtaatgtgt gaatcgcgtt catgttcagt
    10021 gatgtagtcc ccgcggcctt cgcatttatc tgctggaatg tggtggcatt caggtcgatc
    10081 atgctaggca ggcggtttgc cggagtgatg gtcaagacgc catacttgga agcgacaccg
    10141 gcatccctga tgagtgactc gccaaactag ccgttcaagc gaaagtgttg aaccgcatga
    10201 caatcgccag catcaatccg gcaaccggcc agatgattcg cacctttcct accctctccg
    10261 atcaggagct cgatgcccgg atccagtgcg cggccgatgc gtacgctcgg taccgccgga
    10321 cgcctatcca ggaacgtacc cggaggctcc tccgcgcagc cgagattctg gagcgcgaga
    10381 aagaggattt tgggcgcctc atggtcaccg agatgggcaa gacgttgaag gcggcggtgg
    10441 aagaagctgc caagtgtgcc tggggctgcc gctattacgc ggaaaacgcg gaacactttc
    10501 tggccgatga ggcggtggag accgggacgt cgcagacatt catcgtctac cagccaatgg
    10561 gccccatcct ggcggtcatg ccctggaact ttcccttctg gcaggtcttc cggttcgcgg
    10621 ctccggccct gatggcagga aacgtcggac tcttgaagca cgcttcgaac gtccccggct
    10681 gcgcgctcgc gatcgaggag atctttcgcg ccgctggggc gccggaaggc gcgtt
//
LOCUS       DASYRV010000639         3615 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2879579, whole genome shotgun sequence.
ACCESSION   DASYRV010000639 DASYRV010000000
VERSION     DASYRV010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3615
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2879579"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..984)
                     /locus_tag="VGQ24_16920"
     CDS             complement(<1..984)
                     /locus_tag="VGQ24_16920"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HEV8456579.1"
                     /translation="MRLAGPAAPTRRSVIELLAEARARTLLIVSPLSDEEMRRRPAPA
                     LEPVLTELSQIIRFEQRWLLDDRAPPDVRSHDEWFDAMMDVRQRVLDRLDIFAGPTES
                     VPAADRYRMVLEHEYHRNEAIFETVQALGEPYRAPHHRPLPPGRGLADPGFMARFAGG
                     TVEIGGRSDLAVWPEERPLHQVALEPFWMDVLPVTNADFTTFMASGGYENRDVWSEDG
                     WRWLETSGARMPGHWTRVVDGVWQGRWMGREAALDPGSPVSQISYFEAEAFATFVGKR
                     LPTELEWETAAAWDPETQSRRTYPWGNMAPSPHVANLDQFAFEPASVGAFPG"
     gene            1204..2379
                     /gene="iadA"
                     /locus_tag="VGQ24_16925"
     CDS             1204..2379
                     /gene="iadA"
                     /locus_tag="VGQ24_16925"
                     /EC_number="3.4.19.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR01975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008798 - beta-aspartyl-peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-aspartyl-peptidase"
                     /protein_id="HEV8456580.1"
                     /translation="MELLRNAELYDPEPRGRAHLLVAGERIVWVGTDAPAFNGAPEVK
                     VRDLDGRRVIPGLVDGHVHLTGGGGEAGPHTRVPPLALSRLTAGGVTTAIGVLGTDDT
                     VRSTAELVTTARGLIAEGLSAYCYTGGYHVPPATITGSVRRDIVLIDLILGVGELAIS
                     DHRSSQPTLEELLRIAADAHVAGLMMDKAGIVHLHVGDGARGLELVRQALERSELPAR
                     VFNPTHVNRRKALLQEAMALAQRGCTIDITAFPVEEGDDGWSAAEALTRYLEVGLPPD
                     RVTVSSDGGGCMPVFDAAGRVISMDIGRPSAMADTLQELVACGQPLERVLPAFGANQA
                     RLLLLPRKGRLSEGADADLVVLDEDGSVEDVMARGRWHVLAHRPVVRGALEEPEAVG"
     gene            2376..3263
                     /locus_tag="VGQ24_16930"
     CDS             2376..3263
                     /locus_tag="VGQ24_16930"
                     /EC_number="3.4.15.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR02069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009057 - macromolecule catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanophycinase"
                     /protein_id="HEV8456581.1"
                     /translation="MTAGRGYIVPVGGAEEKMGDVAILRRFATLCGPGCRIAIIPTAS
                     MVSETGSRYEELFHSLGVREARALPIATRADGEHPEWLEVLDQVDGVFLAGGNQLRLS
                     TTIGGTQVAKALRRRNREGMHVAGTSAGAAFLCEHMIAFGKEGASPRAKIVTMAPGLG
                     LTNRVIIDQHFRQRDRLGRLLTALAYNPFAIGIGLDENTAGFIGPDETLEVVGGGALT
                     IVDPSGLEFSSMARVRKNDAVCLIGLKLHILDHGSTFNLHTRIAAAAPSLAHRVEGGE
                     VGDKAAKRGSGEAGKRGSG"
     gene            3323..>3615
                     /locus_tag="VGQ24_16935"
     CDS             3323..>3615
                     /locus_tag="VGQ24_16935"
                     /inference="COORDINATES: protein motif:HMM:NF040140.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456582.1"
                     /translation="MQILDKAVFVGPSLYAHFPVIRLDIDLGPLEEWPSGKLGRAFTD
                     PLLAALPGLHEHTCSYGKRGGFVRRLTEGDGTWMGHILEHVAIELQNVAGETVT"
BASE COUNT          616 a         1147 c         1259 g          593 t
ORIGIN      
        1 gcccggaaac gccccaaccg aggcaggctc aaaggcgaac tggtccagat tcgcgacgtg
       61 aggggaaggt gccatgttac cccagggata ggtccggcgg gactgggtct cgggatccca
      121 ggcggcggcg gtctcccatt cgagctcggt cggcagccgc ttccccacaa acgtggcaaa
      181 agcctccgcc tcgaaatagg agatctgact cacaggggaa ccgggatcga gtgccgcctc
      241 acggcccatc cagcgaccct gccagacccc gtccacgacc ctcgtccagt gacccggcat
      301 cctggcaccc gatgtttcca gccagcgcca gccgtcctcc gaccagacat cccgattctc
      361 gtacccgccg gaggccatga aggtcgtgaa gtcggcgttg gtcaccggga gtacgtccat
      421 ccagaacggc tcgagggcga cctggtgcag cggacgctcc tccggccaca cggccaggtc
      481 actccttcca ccgatctcga ccgtgccccc ggcgaaacga gccatgaagc cgggatcggc
      541 cagaccgcgt cccggcggca gtggccggtg atgcggagcc cggtacggct cacccagagc
      601 ctgcactgtt tcgaagatgg cttcgttccg gtggtattcg tgctcgagca ccatgcggta
      661 gcggtcggcg gccggcacgg actcggttgg gccagcgaaa atatccaggc gatccagtac
      721 gcgttggcga acatccatca tcgcatcgaa ccactcgtcg tgcgacctca cgtccggggg
      781 tgctcgatcg tcgaggagcc agcgctgctc gaagcggatg atctgagaca actcggtgag
      841 gaccggctca agggcagggg cggggcggcg ccgcatctcc tcatccgaga gtggactcac
      901 aatgaggagc gtgcgggcgc gagcctccgc aaggagctcg atgaccgatc gacgggtggg
      961 agcggcgggt ccggcaaggc gcattctagt cgctagtcgc tagtcgccag ttgttgatgt
     1021 tagttgtcct aactccaatc tgacggccgg actgccgggt ggtgtgatgt gagtcacgag
     1081 tcgtgagttg ttagtcgata gtcactagcg actgactcgt tacccgcgat ccgcgactcg
     1141 cgactagcga ctagcccata acgactagcg actagcgact aatgactagt accttctccg
     1201 ctcatggaat tgcttcgcaa cgccgaattg tacgacccgg agccacgggg ccgtgcgcac
     1261 ctgctggtgg cgggcgagcg gatcgtctgg gttggaaccg acgctccggc gttcaatgga
     1321 gcgccggagg tcaaggtgcg ggacctggac ggaagacggg tgatcccggg gctggtcgat
     1381 gggcacgtcc atctcaccgg aggtggaggc gaagccggcc cccatacgcg ggttccgccg
     1441 ctggcactga gccggctcac ggccggcggc gtcaccacgg cgatcggcgt gctcggcacc
     1501 gacgacaccg tccggtccac cgccgagctg gtcacgaccg cgcgcgggct gattgcagag
     1561 gggctgagcg cctattgcta caccggcggg tatcacgtgc cgcccgcgac gatcaccggc
     1621 agcgtacggc gggacattgt gctgatcgat ctcatcctgg gggtggggga gctggccatc
     1681 agcgatcatc gctccagtca gcccacgctg gaagagctgc ttcggatcgc ggccgatgcc
     1741 cacgtggctg gactcatgat ggacaaggcg ggaatcgtac acctgcacgt tggcgatgga
     1801 gcacgcggtc tggagctggt gcgccaggct ctcgagcgat cggagctccc cgcccgggtg
     1861 ttcaatccca cccacgtgaa ccggcgcaag gcgctgctcc aggaggcgat ggcactcgcg
     1921 caacgaggct gcaccattga catcaccgcg ttcccggtgg aggaaggcga cgatggctgg
     1981 tccgcggccg aggcgctcac ccgctatctc gaggtgggac tcccgccgga ccgagtgacc
     2041 gtgagctctg acggtggtgg gtgtatgccg gtgttcgacg ctgccggccg cgtgatctcg
     2101 atggatatcg ggcggccgtc ggcgatggcg gacacgctcc aggagctggt ggcatgtggt
     2161 cagccgctgg agcgggtgct gccggcattc ggggccaatc aagcccgcct gctgttactc
     2221 ccccggaagg ggcgtctctc cgagggagcg gacgcggatc tggtcgtgct ggacgaggac
     2281 ggctcagtgg aggacgtcat ggcacgggga cggtggcacg tccttgccca ccggcccgtg
     2341 gtccggggag cgctcgagga gccggaggca gtcggttgac cgccgggcgg gggtacatcg
     2401 tgcctgtcgg gggggccgag gaaaagatgg gcgacgtggc aatcctcaga cgcttcgcga
     2461 ccctgtgtgg cccggggtgc cggatcgcca ttattccgac cgcctccatg gtgagcgaga
     2521 ccggtagccg ttatgaagag ctctttcaca gtctcggcgt gcgcgaggcc agagccctcc
     2581 cgatcgcgac ccgagcggac ggcgagcatc cggagtggct cgaggttctc gaccaggtcg
     2641 atggggtctt cctggctggg ggcaaccagt tgcgcctcag caccaccatc ggtggcacgc
     2701 aggtggccaa ggcccttcgg cggcgcaatc gggaggggat gcacgtcgcc ggaacctccg
     2761 ccggcgctgc gtttctctgc gagcacatga tcgccttcgg caaagaggga gcctcccccc
     2821 gcgccaagat cgtgaccatg gcaccagggc tgggcctgac caaccgggtg atcatcgatc
     2881 agcatttccg gcagcgggac cgcctgggcc gcctgctgac tgccctggcc tacaaccctt
     2941 ttgccatcgg gatcggcctg gacgagaaca cggccggctt catcggccca gacgagaccc
     3001 tcgaggtggt gggcggcggc gcgttgacca tcgtggaccc ttcgggcctc gagttctcgt
     3061 cgatggcgcg ggtccggaag aatgacgccg tgtgtctcat cggacttaag ttgcacatcc
     3121 tcgatcacgg ctcgaccttc aacttgcata cccgcattgc tgcggccgcg ccttcgctcg
     3181 ctcaccgggt ggagggcggt gaggtggggg acaaggcggc gaagcggggg agcggggaag
     3241 cggggaagcg gggaagcggg taagcggggc agcggggcag cggggcagcg gggcagcaac
     3301 gtacgccaat ctggaaagcc acatgcagat tctcgacaag gctgtgtttg tcggccccag
     3361 cctctacgcc catttcccgg tcattcggct cgacatcgac ctgggcccgc tggaagagtg
     3421 gccctccggc aagctcggcc gcgcgtttac cgatccgctg ctggccgccc tccccggact
     3481 ccacgagcac acctgctcct atgggaagcg tggtgggttc gtgcgccggc tcaccgaagg
     3541 agacggcacc tggatggggc atatcctgga gcacgtcgcc atcgagcttc agaacgtggc
     3601 gggcgagacg gtcac
//
LOCUS       DASYRV010000640         1633 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3103462, whole genome shotgun sequence.
ACCESSION   DASYRV010000640 DASYRV010000000
VERSION     DASYRV010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1633
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3103462"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..774)
                     /locus_tag="VGQ24_16940"
     CDS             complement(<1..774)
                     /locus_tag="VGQ24_16940"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEV8456583.1"
                     /translation="MTIEIGVFHNGASDLKAITTPDGVVVNDGSLDEVHRSYQRVLVG
                     QVRQGILADRLGYDYWFMTEHHFMPEGPEFSPNPLLTEAAIASQTKRIRFGQMANILP
                     WWHPLRVAEQAAMLDVISGGRLEFGIGRGYQPREAETWGWRYGSTIQDQERNRAYFEE
                     AFEIIMKAWTQSSFSHHGEYWSLPPRHTKWNHKATMAYFGMPKAGRRVEDVLNVGAPD
                     MYSIGSPIMASTTTLKEISVFPQPVQKPHPQVWEPVTSER"
     gene            1445..>1633
                     /locus_tag="VGQ24_16945"
     CDS             1445..>1633
                     /locus_tag="VGQ24_16945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456584.1"
                     /translation="METCAHVTPDATVELDRLGDEIAELSAHLDAATARLLDLIREFD
                     ARAGWNTGFRSCAEWLGWR"
BASE COUNT          261 a          548 c          523 g          301 t
ORIGIN      
        1 gcgctcgctc gtcaccggct cccacacctg cggatggggc ttctgcaccg gctgcgggaa
       61 gacgctgatc tccttcagcg tcgtcgtcga ggccatgatg gggctgccga tcgagtacat
      121 gtccggcgct ccgacgttga gcacgtcctc caccctgcgc cccgctttgg gcatgccgaa
      181 gtaggccatc gtcgccttgt ggttccactt ggtgtgccgg ggcggcagcg accagtactc
      241 gccgtggtga gagaacgatg attgcgtcca ggctttcatg atgatctcga aggcctcttc
      301 gaaataggcg cggttgcgct cctggtcctg gatggtcgag ccgtagcgcc agccccaggt
      361 ttccgcctcg cgcggctggt agccgcggcc gatgccgaac tccagccgtc cgccgctgat
      421 cacatccagc atcgctgcct gctcggccac gcgaagggga tgccaccagg gcaggatgtt
      481 ggccatctgg ccgaagcgga tccgcttcgt ctgcgacgcg atcgcagcct ctgtcagcag
      541 cgggttgggg ctgaactccg gcccttcggg catgaagtga tgttcggtca tgaaccagta
      601 gtcatagccg aggcggtcgg ccaggatccc ttgccgcacc tgcccgacga ggacgcgctg
      661 gtagctccgg tgcacctcgt ccagtgagcc gtcattcacc accaccccgt ccggcgtggt
      721 gatggccttc aggtcggagg cgccgttgtg gaagacaccg atctcgatgg tcatgctgga
      781 ctcccttctt gcccactcct tgactgtctg cggggcgtgc ggattgtcgg cccagtcctc
      841 cggctcgtgg cgaactcacg gtgtgggtga attaactctg cggggagcgg agacgcaaac
      901 gcccccgtcg accacagaag tggtcgccga gggcgacaaa ccactgcccg agggccggat
      961 aggagcacga cccctccccc gaagaccgac cggactggag aaccctacgt gggacttggc
     1021 gtaaggcctc tgtaggagaa gtgctccgcg aagtcaagtg cggtctctgg tgtgtgtcgg
     1081 gagcacatga tctgtccggt cgcgagagca cgtgaagtct ccgcttttag ccacgataca
     1141 gtgaaggagg tggcgatgct ctgaccctgg gcctgtacga tcgccggcga cagccctggc
     1201 gccgccatgc cccgccctcg agggtcgccc gcattttccg cttgacagat ttttcggcga
     1261 cgatcggccc gtgtcggcag tgctccggga ttctccgccc agcggtccac ccgagcccgc
     1321 cgatgcacga gtggagcgcc tcctccaaaa aaatcactcc tcgcggccgc cacacctcgt
     1381 catgagcctc cccggacacc gcgagaccgg ggtgtagagt cgccccagca caaggagact
     1441 cgccatggag acttgcgcgc acgtcacccc ggacgccact gtcgagctcg atcggctggg
     1501 cgatgagatc gccgaactct cggcgcatct cgatgccgcg accgcccgcc ttctcgatct
     1561 catccgtgag ttcgacgcgc gcgcgggctg gaacaccggc tttcgctcct gcgccgagtg
     1621 gctgggctgg cgc
//
LOCUS       DASYRV010000641         1656 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1220876, whole genome shotgun sequence.
ACCESSION   DASYRV010000641 DASYRV010000000
VERSION     DASYRV010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1656
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1220876"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1391)
                     /locus_tag="VGQ24_16950"
     CDS             complement(<1..1391)
                     /locus_tag="VGQ24_16950"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEV8456585.1"
                     /translation="MTTRADTRPEIVTAPPERAAEAPTARPRFGLLPKIILFLAAVLI
                     PLAAITWTLSVQTLKRSMTEEFTSKGTAIANSLASSGVDLIVTRDASTVQALVDQYAA
                     ISGVAYVMVYDNEKTLVAHTFSPRVPRGIIEKHLVTGAVAQQVREIQYPDPVTGAEKQ
                     IIDVGVPMLGGHLGTVRVGMDKAIISAASARAGLFLLLAFGGVAVVAVLVAVLVARRL
                     TQPVAHLVSVAQRVGRGDLSELVPVTSRDEIGQLAATFNEAVVRLRSLVQTEADRDQL
                     RALGEVGQAVSSTLDLETVLRTIITHAVHLSKADQGTIYEYDQAAEVFVAHANYGVSD
                     EMVKALHESRIRLGETSVGMCALRRAPFQTPDIEQAEDNRLRDLLLGEGIRSVLAAPL
                     LREDLVIGALVIRRKTAGEFPDSVVTLLQTFAGQSVLAIQNAQLFKEIQAKSEQLESG
                     SQLKSQFLANMSH"
     gene            complement(1434..>1656)
                     /locus_tag="VGQ24_16955"
     CDS             complement(1434..>1656)
                     /locus_tag="VGQ24_16955"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEV8456586.1"
                     /translation="AKVVVEGLRRAGPNPTRLGFRQALESLRHFDLGIGAPLTFGPER
                     HHGLDNVYFTRVEKDRWVSIADWDAAVKA"
BASE COUNT          277 a          551 c          537 g          291 t
ORIGIN      
        1 tcgtgcgaca tgttcgcgag gaactgtgac ttgagctggc tcccggactc gagctgctcg
       61 ctcttggcct ggatctcctt gaagagctgc gcattctgaa tggcgagcac cgactggcca
      121 gcaaaagtct gcagcagcgt caccacggag tcggggaact cgcccgccgt cttgcgccgg
      181 atcaccagcg ccccgatgac caggtcttca cgcagcagcg gcgccgccag caccgaacga
      241 atgccctccc ccagcaggag atcccgcagc cggttgtcct ccgcctgttc tatgtccgga
      301 gtttggaagg gggcgcggcg cagggcgcac atgccgacac ttgtctcgcc gaggcgaatt
      361 cgcgactcgt gcagagcctt gaccatttcg tcgctcacgc cgtagttcgc gtgcgccacg
      421 aagacttcag ccgcctggtc atactcgtag atcgtcccct ggtccgcctt cgaaaggtgc
      481 acggcgtggg taataatggt gcgtaggact gtctcaaggt cgagggtgga actcaccgcc
      541 tgaccgactt ctccgagggc ccggagttgg tcgcggtcgg cctcggtctg caccagcgaa
      601 cggagacgga cgacggcctc gttgaaggtc gccgccagct ggccgatctc gtcacgagat
      661 gtcaccggca ccagttccga caggtcccct cgaccgactc gctgggcgac gctcacgagg
      721 tgagccaccg gctgggtgag gcgccgggcc acgaggaccg cgaccaggac ggccaccacc
      781 gcgacaccgc cgaaggccag gaggaggaac agcccggctc tggcgctggc ggcactgatg
      841 atcgccttgt ccatccctac gcggacggtg ccgaggtggc ctccgagcat cggaaccccg
      901 acgtcgatga tctgcttctc ggcgccggtg accggatccg ggtactggat ctctcgcacc
      961 tgctgcgcca ccgcgccggt caccagatgt ttctcgatga tgccgcgtgg aacgcgaggg
     1021 gagaacgtgt gagcgaccag agttttctca ttgtcgtaaa ccatcacgta ggcaacgccg
     1081 ctgatggcgg cgtactggtc tacgagggcc tggacggtgg aggcgtcgcg ggtcacgatc
     1141 aggtccacgc ccgagctggc caggctgttg gcgatagcgg ttcccttcga ggtgaactcc
     1201 tccgtcatgc tgcgcttcag ggtctggaca gagagagtcc acgttatggc ggccagcgga
     1261 atcagcaccg ccgccaggaa caggatgatc ttcggcagca gcccgaaccg cggcctcgcc
     1321 gtcggggctt cggcagcccg ctctggaggc gctgtcacga tctccggccg cgtgtcagcc
     1381 cgcgtggtca ttgctctccc ctttctctgg ccaatcctcg gctccgcgcc cgctcacgct
     1441 ttcaccgcgg cgtcccagtc ggcgatggac acccaccggt ctttctccac acgggtgaag
     1501 tagacgttgt ccagcccgtg atgtcgctcc ggaccgaagg tcagaggggc gccgatcccg
     1561 aggtcaaagt gccgcagaga ttcgagggct tggcggaatc caagcctggt cgggttagga
     1621 cccgcgcggc gcagcccctc gacgactacc ttggcg
//
LOCUS       DASYRV010000642         1519 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3943147, whole genome shotgun sequence.
ACCESSION   DASYRV010000642 DASYRV010000000
VERSION     DASYRV010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1519
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3943147"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(161..415)
                     /locus_tag="VGQ24_16960"
     CDS             complement(161..415)
                     /locus_tag="VGQ24_16960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456587.1"
                     /translation="MSHATDVERGQAILSAIARRLQTVAIGDPAVQSITFTVHFRSGG
                     GWPRGVTMRVEVSDDLPQAGTNGHAPTGTLDACGPTRAKE"
     gene            complement(412..1047)
                     /locus_tag="VGQ24_16965"
     CDS             complement(412..1047)
                     /locus_tag="VGQ24_16965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456588.1"
                     /translation="MTRKVAIIGASPSRKQGPWFDPAWECWALNEIAQPRYEKHFELH
                     PRSVQSPKDFAWLAQCQRPCYVLDPDEWRPGEIPMPVRYPLDWVLEVTGGRRYFTATF
                     CFQIALALAEGYEEIGLWGVDLDLGTARERLVEKPCVEYWLGFAQGRGVKVTLPPTST
                     LLSRRYVYGVDYHAEKADIEQVCREFGAADWHTWSDETWHAFAKKLEAAGR"
BASE COUNT          260 a          521 c          449 g          289 t
ORIGIN      
        1 ggtgccgggc ttctcagctt gagccggcgt caacgtggtt gctcgcgcgg gagccttccc
       61 ttgcaggacg ggcccttcag atcaggttaa gttctagccc tcagcctgat cctagcgaac
      121 aaccgtgaat aggactacta caggttcgtc cgcttgtcta ctattctttt gcccgggtcg
      181 ggccgcaagc gtccagggtg cccgtcggcg catgcccgtt cgtccccgcc tgggggagat
      241 cgtcgctgac ctccactcgc atcgtcaccc cccggggcca gccgccgccc gagcggaaat
      301 gcaccgtgaa ggtgatggac tggacggctg gatcgccgat cgccacggtc tggaggcgcc
      361 gggcgatggc cgagaggatg gcctgacccc gctcgacgtc ggtagcgtga ctcaccggcc
      421 ggcggcctca agtttcttcg caaacgcgtg ccaggtctcg tcagaccatg tgtgccagtc
      481 cgccgcccca aactctcggc agacttgctc aatatcggct ttttccgcgt ggtagtccac
      541 cccatagacg taccgccggg agaggagcgt cgacgtcggc ggcagcgtca ccttgacccc
      601 gcgcccctgg gcgaaaccga gccagtattc gacgcaaggc ttctccacaa gacgctcgcg
      661 ggcggtgccg aggtccagat ccacccccca caacccgatt tcctcatacc cttcggcgag
      721 cgccagggcg atctggaagc agaaggtcgc ggtgaaatag cgccggccgc ccgtcacctc
      781 gagcacccag tcgagcggat accgcaccgg catcgggatc tcgccgggcc gccactcatc
      841 cgggtccagg acatagcagg gacgttggca ctgcgccagc cacgcgaagt ccttggggga
      901 ctgcaccgag cgcgggtgga gttcgaagtg cttctcgtat cgaggttgcg cgatctcatt
      961 gagggcccag cattcccagg cggggtcgaa ccacggccct tgtttccgtg aggggctggc
     1021 gccgatgatt gcgaccttcc gggtcatgca ggcgtgatct cgcgcggatt gccaatatgc
     1081 tcgaaatcca ccattgcacc aacaacgcta cgcagccctc ccgattttgt cttggggcag
     1141 ggatcacacg tccaggtctc ggtgatcacc cgcatcgttg cactgttgaa tcggcgcgga
     1201 gggagttgcg tctgtcccgt ccatgttgtc gtactaatga ctcgatccag aaaacgccgg
     1261 tccccgccct caccttggca atgtacgcaa taccgcttat cccgctccaa ttcccgtctc
     1321 tcgtctgcgc tcatctcgtt cagtaggcgc attagatcct ccgcacgatc cagagctccg
     1381 cctcatcgct cgggcagtag gacactttgc cggcgccatc gacgatcttg aaccgcaccc
     1441 gcagctccgc ccgggcctgc gacagatcac tggatgccgg ctggaattcc acgatcccgc
     1501 ccgtcgagct cgtcaccgc
//
LOCUS       DASYRV010000643         3867 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3943601, whole genome shotgun sequence.
ACCESSION   DASYRV010000643 DASYRV010000000
VERSION     DASYRV010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3867
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3943601"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1320
                     /gene="pnp"
                     /locus_tag="VGQ24_16970"
     CDS             <1..1320
                     /gene="pnp"
                     /locus_tag="VGQ24_16970"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: protein motif:HMM:NF008805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEV8456589.1"
                     /translation="NAKDKAARAAGLGSVKKDVVAKLAAEFADKVREIGNEIEEIEYR
                     VMRGQVLDKGERVDGRDMDTVRPIAIETGVLPRAHGSALFTRGQTQALVAVTLGTSDD
                     EQRIDSIDVSGETTKSFMLHYNFPPYSTGEVKMIRGTSRREIGHGALAERALQPLLPA
                     FDSFPYTLRVVSEILESNGSSSMASVCGGSLALMDAGVPLRAPCAGVAMGLIKEGKKV
                     AILTDILGSEDHLGDMDFKVAGTEAGITSIQMDIKVEGIDLDLMEEALAKAKKGRLHI
                     LGEMKRALAAPRAELSPHAPRIFTIQIKPDKIGDVIGPKGKTIRGIQDATGAKISIED
                     SGIVTIAAVGGEAGQKAREMVMAIVAEPEVGRVYEGPVKSTTPFGAFVEIIPGVEGLL
                     HISELQHGRTEKTEDVVKKGDIVQVKLLEVDDRGRMKLSRKALLPKE"
     gene            1336..2586
                     /locus_tag="VGQ24_16975"
     CDS             1336..2586
                     /locus_tag="VGQ24_16975"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEV8456590.1"
                     /translation="MEHERLDDGLLRSVAPNGLTVLSERLPGVRSAAVGIWVRTASAH
                     EARDVMGAAHLLEHLVFKGTERRTSKQLAEELEVRGGALDAYTSRDHTSFQAHVLDAD
                     VPLAVEVLTDLVRHPLLRAEDLELERNVVLDEINSVLDTPDDLVFELHARTLWPEHPY
                     GYSILGTPESIGRLRAEDLSTLHQRGYYRGNCVIAAAGHVDHDQLLTVLEREGWFEGS
                     LEPPRPPVGSTPARRGETLQETRDSAQSHSVLGTDCFDARDPRRYALAILSNLLGGGM
                     SSRLFQRVREELGLAYAVYAFHHLYQSAGTIGVYVGTHPASAAAAEAAIRAELTRLSR
                     NGLTAEELAGGQRQLKGQVMLALESPSSRMHRLAGTVLHGDRYRRLDEILAEIDAVSL
                     PMIGQLAAEYFDPDRWCVVRLGPT"
     gene            2628..3740
                     /gene="ald"
                     /locus_tag="VGQ24_16980"
     CDS             2628..3740
                     /gene="ald"
                     /locus_tag="VGQ24_16980"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000286 - alanine dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HEV8456591.1"
                     /translation="MIIGVPKEIKTNENRIALVPAGAELLRAKGHRVCIERGAGLGSG
                     FSDEQFVAAGAELMETPEAVWATAEMIMKVKEPIAVEWPRMRRDQLIYTYFHFAAAEE
                     LTRAVIASGAVAIAYETVQLPSGELPLLTPMSEVAGRMAVQEGAKYLEKVYGGRGVLL
                     GGVPGVAPAKVVIIGGGVVGINAAKMAAGLGANVTILDVSLERLRYLDDVLPANVKTI
                     YSNRFNILDAIERADLVIGAVLLPGAKAPHLITRADLSRMQAGAVIVDVAVDQGGCVE
                     TIKPTTHENPTYFVDGILHYGVANMPGGVPRTSTLALTNATLPYAVKLAKLGWQAACR
                     EDKALGLGLNVVGGKVVYPGVAEAFGLPLVTVESVL"
BASE COUNT          683 a         1227 c         1361 g          596 t
ORIGIN      
        1 aacgcgaagg acaaggcggc cagggcggcg ggactgggga gcgtcaagaa ggacgtggtc
       61 gccaagctcg ccgcggaatt cgccgacaag gtgcgcgaga tcggcaacga gatcgaggaa
      121 atcgagtacc gggtgatgcg cggccaggtg ctggacaagg gcgagcgggt ggacgggcgc
      181 gacatggaca cggtccggcc catcgcgatc gaaacgggtg tgctaccccg ggcccacggt
      241 tcggcgctgt tcacccgggg ccagacccag gctctggtgg ccgtgacgct ggggaccagc
      301 gacgacgagc agcgcatcga ttcgatcgac gtgtccggcg agaccaccaa gtcgttcatg
      361 ctgcactaca atttcccgcc ctactcgacg ggagaggtca aaatgatccg cggcaccagc
      421 cgccgcgaga tcggacacgg tgccctggcg gagcgggcgc tgcagccgtt gctgccggcc
      481 ttcgacagct tcccctacac cctgcgcgtg gtgtcggaga ttctggaatc caacgggtcg
      541 tccagcatgg cgagcgtgtg cggcggctcg ctggcgctga tggatgcggg cgtgccgctc
      601 cgggctccct gcgccggcgt ggcgatggga ctcatcaagg aaggcaagaa ggtcgcgatc
      661 ctgaccgaca tcctcggctc ggaagaccac ctcggcgaca tggacttcaa ggtggccggg
      721 accgaggcgg ggattacctc cattcagatg gacatcaagg tagaaggcat cgacctcgac
      781 ctgatggaag aggcgctggc caaggccaag aagggccggc ttcacatcct cggcgagatg
      841 aagcgggcgc tggccgcgcc ccgggccgag ctctcgcccc acgcgccgcg catcttcacc
      901 atccagatca agccggacaa gatcggtgac gtgatcgggc ccaaggggaa gacgattcgc
      961 ggcatccagg acgcgactgg cgccaagatc agcatcgaag attccggcat cgtgaccatc
     1021 gcggccgtcg gcggcgaggc cgggcagaag gcgcgcgaga tggtcatggc gatcgtcgcg
     1081 gagccggaag tcgggcgggt ctacgagggg ccggtgaaga gcaccacacc cttcggcgcc
     1141 ttcgtggaga ttatccccgg agtcgagggg ctgctccaca tcagcgagct gcagcacggc
     1201 cgcaccgaaa agaccgaaga cgtggtcaag aagggcgata tcgtccaggt gaagctgctc
     1261 gaggtggacg accgcggccg catgaagctg tcccgaaagg ccttgctccc gaaggaatag
     1321 ggatcagggg ttcgggtgga gcacgaacgc ctcgacgacg ggctgctgcg gtcggtagcc
     1381 cccaatggtc tgaccgtgct ctcggagcgg cttccgggag tgcgctcggc ggcggtcggc
     1441 atctgggtgc gcacggcgag cgcccacgag gcccgtgacg tcatgggcgc ggcccacctg
     1501 ctggagcacc tcgtcttcaa gggtaccgag cggcggacct ccaagcagct cgccgaggag
     1561 ctcgaggtgc ggggcggggc gctcgacgcc tatacctcac gtgaccatac cagctttcag
     1621 gcgcacgtgc tcgacgcgga cgtaccgctc gccgtcgagg tcctgaccga cctggtgcgc
     1681 cacccgctgc tgcgcgccga ggatctcgag ctcgagcgga acgtggtgct cgacgagatc
     1741 aacagtgtgc tcgacacccc ggacgatctg gtcttcgagc tgcacgcccg gacgctgtgg
     1801 cccgagcacc cgtacgggta ttcgatcctc ggcaccccgg aaagcatcgg acgcctccgg
     1861 gcggaagatc tcagcaccct gcaccagcgg ggttactacc ggggcaactg tgtgatcgcg
     1921 gccgcaggcc atgtcgatca tgaccagctg ctcaccgtgc tggagcgaga ggggtggttc
     1981 gagggcagcc tcgagcctcc gaggcctccg gtcgggagca cgccagcccg ccgcggggag
     2041 accctgcagg agacccggga cagcgcccag agccacagcg tgctgggcac cgactgtttt
     2101 gatgcgcgcg atccgcgccg ctatgccctg gccattctga gcaatctgct cggcggcggg
     2161 atgtcgagcc gcctgttcca gcgggtccgg gaggagctgg gcctggccta cgcggtctac
     2221 gcctttcatc acctgtacca gagtgccggc acgatcgggg tctatgtggg cacccatccg
     2281 gcgtcggcgg cggccgccga agcggcgatc cgggcagagc tcacgcgtct gtcgcgtaat
     2341 ggcctcacgg cggaggaatt ggcgggcggg cagcggcagc tcaaggggca ggtgatgctg
     2401 gcgctggaga gcccctcgag tcggatgcat cggctggccg gcaccgtgct ccacggcgac
     2461 cggtaccggc gcctcgacga gatcctcgcg gaaatcgatg cggtgagcct gcccatgatc
     2521 ggacaactcg ccgccgagta ttttgatccg gatcgctggt gtgtcgtgcg gctcggccca
     2581 acctgatcgg gcgcgctccc cgctcccgcc ccgcagagga tggcgtcatg atcatcggtg
     2641 tccccaaaga aatcaaaacc aacgagaatc gcatcgccct ggtccccgca ggcgccgagc
     2701 tgctccgggc caagggacac cgcgtgtgca tcgaacgggg tgcgggactg ggcagcgggt
     2761 tcagcgacga gcaattcgtc gccgccggcg ccgagctcat ggagactccg gaagcggtct
     2821 gggcgacggc cgagatgatc atgaaggtca aagagcccat cgcggtggag tggccgcgga
     2881 tgcggcgcga tcaactgatc tacacctact tccatttcgc cgcggccgaa gagcttaccc
     2941 gcgcggtcat cgcttcgggg gcggtggcga tcgcctatga gacggtgcag ctcccgagcg
     3001 gggagctgcc gctgctgaca ccgatgtcgg aagtggccgg ccggatggcg gtgcaggagg
     3061 gagccaaata cctcgaaaag gtgtacggcg ggcgcggcgt gctgctgggg ggagttcccg
     3121 gcgtggcgcc ggccaaggtg gtgatcatcg gtgggggcgt agtcgggatc aatgcggcca
     3181 agatggccgc cggcctcggc gccaacgtga caatcctgga tgtctcgctg gaacggctgc
     3241 gctacctcga cgacgtgctg ccggccaacg tcaagacgat ctactccaac cgcttcaaca
     3301 ttctggatgc tattgagcgc gccgatctgg tcatcggggc cgtactgctg cccggtgcca
     3361 aagcgcctca cctgatcacc cgggccgatc tgagccggat gcaagccggc gccgtcatcg
     3421 tcgacgtggc ggtggatcaa ggcggctgcg tggagacgat caagcccacg acccatgaga
     3481 accctaccta cttcgtcgac ggcattctgc actatggcgt ggccaacatg ccgggtggag
     3541 tgccgcgaac ctccaccctg gccctcacca acgccacgct gccctacgcg gtgaagctgg
     3601 ccaagctcgg atggcaagcc gcctgtcgag aggacaaggc gctcggactg ggactgaatg
     3661 tggtcggcgg gaaggtggtg tatccgggcg tggcggaggc gttcgggttg cccctagtga
     3721 cggtggagtc ggtgctgtag gcctcaggcc tcaagcctca ggcctcaggc cgcaggccgc
     3781 aggcctcagc tttccggttt cccgcatcta gcggcctgct acctgctgcc tgctgcctgc
     3841 tacctgctga cgaaggacat ctatcct
//
LOCUS       DASYRV010000644         4347 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3944198, whole genome shotgun sequence.
ACCESSION   DASYRV010000644 DASYRV010000000
VERSION     DASYRV010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4347
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3944198"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..271)
                     /locus_tag="VGQ24_16985"
     CDS             complement(<1..271)
                     /locus_tag="VGQ24_16985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456592.1"
                     /translation="MNRTRRIRLVSHVVLAGALLSAPLANASVNNWPGTKKGEPAPVM
                     NGIPPTLAKNLGNFDDLDFRVYTGQQWQDLHKSHSKDAIVHWPDGH"
     gene            complement(439..663)
                     /locus_tag="VGQ24_16990"
     CDS             complement(439..663)
                     /locus_tag="VGQ24_16990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456593.1"
                     /translation="MSRQLQPRPRHVTGIVSALLAACLLITSGCSDDNRVCPGATASV
                     TTLEPLGYLNTQLGYVLGMGAQIGLRLLHG"
     gene            916..2139
                     /locus_tag="VGQ24_16995"
     CDS             916..2139
                     /locus_tag="VGQ24_16995"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heparan-alpha-glucosaminide N-acetyltransferase
                     domain-containing protein"
                     /protein_id="HEV8456594.1"
                     /translation="MGLSGGHNSVTAPAASDDAPTAASVSTVSADRQRLDSIDLLRGL
                     VMVLMALDHVREYFTKARFDPLDLTQTSAVLFATRWITHFCAPAFLLLAGTSAYLVSK
                     KRTRTELSRFLLTRGLWLVFLELTVVIFAWSFDLSYKGGLDLAVIWAIGWSMIAMAAL
                     VYLPVSAVGAIGILMIFGHNALDGIKPEALGAWAPVWSVLHVQGPIPYGFVVYPLVPW
                     IGVMAAGYALGTVYDLPDARRRRILSWLGLATIAGFLALRALNVYGDPQPWSAQSSAL
                     FSVLSFMNLAKYPPSLLYLLATLGPALLALAWFEHARGAAARFLVTIGRVPLFFYVIH
                     IALAHLLAGLAALALGYGPEVLTNRPWVLSPGWGFGLPVVYAMWAIVVLALYPACRWF
                     AAIKQRRRHWWLSYL"
     gene            2213..2288
                     /locus_tag="VGQ24_17000"
     tRNA            2213..2288
                     /locus_tag="VGQ24_17000"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2246..2248,aa:Cys,seq:gca)
     gene            2466..3020
                     /locus_tag="VGQ24_17005"
     CDS             2466..3020
                     /locus_tag="VGQ24_17005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456595.1"
                     /translation="MRPLSPVLAALSLLVLASPALAGNWSLGTNLGVSLYRPEDGEDL
                     TLIAIPSSAVFFQPGLRVGFTGTNSPHEFYLDTGVSDLDGDVTRILFTGNYQYNFASK
                     TSTSFYLTGGLGFLNVSIVDVGATSLMVGAGAGARFRVANGHGSIRTEFRYDRVAEGD
                     DGATEVIDEAGLVGFKFGFDLWMK"
     gene            3037..4023
                     /locus_tag="VGQ24_17010"
     CDS             3037..4023
                     /locus_tag="VGQ24_17010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456596.1"
                     /translation="MFAFVLIADTADRFANFGPYVASIDPGGRVAFQASLRAGGSGIF
                     LGENGPIADLASTDGFIQDFISHPDICHDGSWCAYATLRSGEQAVVLGRAGRVAAIAD
                     TRGSLTRIGPLGPVMNEAGVIAFRADTDSGRPAIFKAEGASIVQVAAPPGLSGFHGLP
                     VINRSGRVAFRADFEGGGQSIIADDHGVPITLADTNGAFVGLGRFPCLNEAGVVAFSA
                     TLRDGGAGVFLAMGDEVAPAIAATDEFESVRGALLDDGSGVLFFATPRGGTLGVYDAM
                     SRKVLSIGDELFGSIVSDFALNPVSINGAGQFALRLKLENQMQLIVRADPAR"
BASE COUNT          687 a         1397 c         1356 g          907 t
ORIGIN      
        1 tgtgaccgtc gggccaatgc acgatggcgt ccttcgaatg gctcttgtgc agatcctgcc
       61 attgctgccc cgtgtacact cggaagtcga ggtcgtcgaa gttcccgagg ttcttcgcga
      121 gtgtcggggg aatgccattc atcacgggtg cgggttcacc cttcttcgtg ccgggccaat
      181 tgttcaccga agcgttcgcg aggggcgccg agagcagtgc gccggcgagg accacgtggg
      241 acaccaacct gatgcgtctc gttctgttca tgactcacat cccctttcct tcgttcgtgc
      301 caggagatca ccgatcacca ccttcgcagc ctcggggagc atcgcccgtg catgggcggc
      361 acccaattcc ccgggcccta ccgctgatca gcgcgacttt tccgttcagt cgagccatga
      421 gaaatcccct tgatcttgtc agccgtgcag cagcctgagc ccgatctgcg cgcccatgcc
      481 gagtacgtag ccgagctggg tgttgaggta tccgagcggc tcgagagtgg tcacggaggc
      541 agttgcgccc gggcaaacac ggttgtcgtc gctacagccc gaggtaatga gcaggcacgc
      601 ggccagtaga gccgagacga ttccggtgac gtgccgaggg cggggctgga gttgtcggct
      661 catagatcag tccaagattg accgagatcc ttggaggagg ccaatcaaat ctggcactca
      721 gtattggcca cacctcgagg gtgaggtgtc gtaaactgct tcgttccaac ggggggcggc
      781 atagccaagt ggctaaggcg acggtctgca aagtctctcc acgaaacctg gttcacgtcc
      841 gtaacaccgc aacgccaacg gtgggcgctt ccaccgttct ttgttgctgg tcgggagggg
      901 acaggagggg acgcgttggg actctcaggt ggtcacaatt cggtcacagc cccggcagct
      961 tcggatgacg cccccaccgc cgcctccgtt agcactgtaa gcgctgaccg acagcggctc
     1021 gactccatcg acctgctgcg cgggctggtg atggtgctga tggcgttgga ccacgtacgc
     1081 gagtacttca ccaaggcgcg cttcgatccg ctcgacttga cgcagaccag cgccgtgctg
     1141 ttcgcgacgc gctggatcac acacttctgc gcgccggcgt tcctcctgct ggccggcacc
     1201 agcgcttatc tggtctcgaa aaagcgcacc cgtaccgagc tttcaaggtt cctgctgacg
     1261 cgcggcttgt ggttggtgtt cttggaattg accgtggtca ttttcgcgtg gtcattcgac
     1321 ctgagctaca aaggcggcct cgaccttgcg gtgatctggg ccatcggttg gtcgatgatc
     1381 gcgatggccg cgctggttta cctgcccgtc tccgcggttg gcgccatcgg catcctgatg
     1441 atcttcggcc acaacgcgct cgacggcatc aagcccgaag ccctcggtgc ctgggcaccg
     1501 gtgtggagtg tgctgcatgt gcagggtccg atcccgtacg gcttcgtggt ctacccactc
     1561 gtgccttgga tcggcgtgat ggcggcgggc tatgcgctcg gcacggtcta cgacctgccc
     1621 gacgcacgcc ggcgccgcat cctcagctgg ctcggccttg ccacgatcgc cggcttctta
     1681 gcgctgcgcg cgcttaatgt ctacggcgat ccacaaccct ggagcgcaca gagctccgcg
     1741 ctgttcagcg tgctgtcgtt catgaacctg gcgaagtatc cgccgtcgct cctatacctg
     1801 ctggcgacgc tgggccccgc ccttcttgcc ctcgcatggt tcgagcacgc gcgaggcgct
     1861 gctgcgcgct ttctcgtcac gatcggccgc gtgccgctgt tcttctacgt catacacatc
     1921 gccttagcgc acctgctcgc cggcctggcg gcgctggcgc tgggatacgg acctgaagtg
     1981 cttaccaaca ggccctgggt gctgtccccg ggatggggct tcggcttgcc ggtggtctac
     2041 gcgatgtggg ctatcgtcgt gctcgcgctc tatcccgcct gccggtggtt cgccgcgatc
     2101 aaacagcgcc gccgtcactg gtggctgtcg tacctctagg ccgttggcgg ctctggcttg
     2161 gcccttgctg atccctccaa ctctgctaca ctcaaacgct tgcagtagtt gaggcggcat
     2221 agccaagtgg ctaaggcgac ggtctgcaaa accgttattc cccggttcga atccgggtgc
     2281 cgcctccata cttacgagct ttccgattcc cgcctgtacc gccatctgtg ctgcctccat
     2341 cgatcggttc tcgtccgtgg atttcgtcca aacgtcgggt tgcgtccgcg gggcccggcg
     2401 tccacactac gagttgctcg ttccgcactt cggccccacc tcacgccatc aaggagggtc
     2461 ccgcgatgcg tccgctctcg cccgtacttg ccgcgctctc gctcttggtc ctggcttcgc
     2521 ccgcactcgc cggaaactgg agtctcggca ccaaccttgg agtctctctt taccgcccgg
     2581 aggatgggga ggatctaacg ctcatcgcca tcccgagcag cgccgtgttc ttccagcccg
     2641 gcctccgggt cgggttcacg gggaccaatt ctcctcacga gttctacctg gacacgggag
     2701 tttcggacct ggacggtgac gtgaccagga tcctgttcac ggggaactac cagtacaatt
     2761 tcgccagcaa aaccagcacg tcgttctacc ttaccggcgg cctcggcttc ctcaacgtca
     2821 gcatcgtgga cgttggagca actagcctga tggtgggagc aggggctgga gcccggttcc
     2881 gggttgccaa cgggcacggc tcgatccgga ccgagttccg atacgaccgc gtggccgagg
     2941 gggatgacgg ggctacagag gtgatcgacg aggcggggct cgtcgggttc aagttcggat
     3001 tcgacctctg gatgaagtaa gcgggtagtc tcgggcatgt tcgcgttcgt gctgatcgcc
     3061 gacacggctg atcgattcgc caatttcggg ccctacgttg cttcgatcga ccccgggggg
     3121 cgcgtcgcgt tccaagcgtc gctcagggcc ggcgggtccg gcatcttcct aggggaaaac
     3181 ggtccgatcg ccgatctcgc atcgacggac ggcttcatcc aagacttcat aagccatccg
     3241 gacatttgcc acgatgggtc ctggtgcgcc tatgcaacgc tccggtcggg cgagcaggcg
     3301 gtcgttctcg gccgggctgg ccgagtggcc gccatcgcgg acacccgcgg ttccctcact
     3361 cgaatcggcc cgctggggcc cgtgatgaac gaggccggcg tgatcgcgtt ccgcgccgac
     3421 acggactccg gcagacccgc catcttcaag gcggagggtg cgtcgatcgt acaggtggca
     3481 gccccgccag gattgagcgg gtttcatggg ctccccgtca tcaaccggag tggaagggtg
     3541 gccttccgcg cggatttcga gggcggtgga cagagcatca tcgccgacga ccacggcgtg
     3601 cccatcacgc tcgccgacac aaacggcgcc ttcgttgggc tgggaaggtt cccttgtctc
     3661 aatgaggccg gggtcgtggc gttcagcgcc acgctccggg acgggggtgc cggtgtcttt
     3721 cttgccatgg gggatgaagt ggcgccggcc attgccgcca cggacgagtt cgagagcgtt
     3781 cgtggggcgc ttctggatga cgggtcaggc gttctgttct tcgcgacgcc tcggggaggg
     3841 accctcggag tctacgacgc gatgtcgcgc aaggtgcttt ctatcggaga tgagctgttc
     3901 ggctcgatcg tcagcgactt cgccctcaat cctgtatcta tcaacggcgc cggtcaattc
     3961 gctctccggc tcaagctgga aaaccagatg caactgatcg taagggcaga tccggcaagg
     4021 taggcagagg cggggaccgt gccgcctcaa aacttctcca aactccgcta ggaccccgat
     4081 tcaaagcccc gtatccgcgg catcgcccac cacttgcgcc ctcaccgaac cgcttcgaca
     4141 acccactcct gttcggtcgg agcgggaagc tcgtttcctg ttgcagcagg tcgtgtagag
     4201 gtactcagcc gatggccgga tgtgctttgc gagccccagc tcgcacggaa ggagatctca
     4261 tgttccgccc ctcgcgaatc atctcggctc ctcggctcgc gatctgtccc tatcaccgct
     4321 gcttcgcttt cggtttcctg cttttgg
//
LOCUS       DASYRV010000645         2410 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3110924, whole genome shotgun sequence.
ACCESSION   DASYRV010000645 DASYRV010000000
VERSION     DASYRV010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2410
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3110924"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..193
                     /locus_tag="VGQ24_17015"
     CDS             <1..193
                     /locus_tag="VGQ24_17015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456597.1"
                     /translation="CGRQALMERAALPAPETLVSNPAVLVRRVGRGSPDALSRVPASA
                     GAREPPPGAGIHLDWRSDP"
     gene            190..549
                     /locus_tag="VGQ24_17020"
     CDS             190..549
                     /locus_tag="VGQ24_17020"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEV8456598.1"
                     /translation="MKCLMMIKHTESYRGEPIPQALMDAMGEFVTEGFKSGYLKDTAG
                     LKPTAEGFRVRLSKNQLKVTDGPFTESKEVVGGYAIVEVASKEEALKIARQFMELHRV
                     HWPAFEGESEVRPLEDM"
     gene            complement(566..1099)
                     /gene="msrA"
                     /locus_tag="VGQ24_17025"
     CDS             complement(566..1099)
                     /gene="msrA"
                     /locus_tag="VGQ24_17025"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEV8456599.1"
                     /translation="MNEQERGARSAVAGQQTEVAVLAGGCFWGVEEILRAVPGVLDTD
                     VGYTGGWLPNPTYDDTHDSKSGHAEAVRITFDPSVLSYEDLLERWFFRLHDPTTLNRQ
                     GNDVGTQYRSAIFPQTPEQRAAAERVKARVEASGKWKRPITTSIEPAGTWYSAEGYHQ
                     DYLRKHPGGYSCHFMRD"
     gene            complement(1240..1827)
                     /locus_tag="VGQ24_17030"
     CDS             complement(1240..1827)
                     /locus_tag="VGQ24_17030"
                     /inference="COORDINATES: protein motif:HMM:NF025636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEV8456600.1"
                     /translation="MHEGRTKDRRIQKTEALLRDALAALIREKPYDDIVVKEILARAN
                     VGRSTFYTHFRDKDELLLSGIHGMLSSAGPAGGRRVPAKPWESLVWFSLPILEHIEEH
                     RRAGGATMDPRGRRAMHERLQHAITQLIEDEVRTALRRRPKSHASPELLVQWIASTFA
                     LVLNWWVESDSPLPAGDADRLFRGLIEPSLAKLLS"
     gene            1984..>2410
                     /locus_tag="VGQ24_17035"
     CDS             1984..>2410
                     /locus_tag="VGQ24_17035"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEV8456601.1"
                     /translation="MTNTKASHPVPGTKGRVLHSAAGYDLLAWLFLLGRERAFRERLV
                     RLARFQPGQSVLDIGCGTGSLAIAAKRRVGPSGTVEGIDASPEMIARAKKKASQAGLA
                     VAFTDGVVEALPFPDARFDAVLSTLMLHHLPREARQQCAR"
BASE COUNT          383 a          791 c          807 g          429 t
ORIGIN      
        1 ttgtggccgt caggcgctga tggagcgcgc ggcactgcca gcaccggaga ccctggtgtc
       61 gaatcccgcg gtcctcgttc gacgtgttgg tagagggagc cctgacgccc tctcccgggt
      121 tccggcaagc gccggtgccc gcgagccacc acctggggcc ggcattcacc tggactggag
      181 atccgatcca tgaagtgtct gatgatgatc aagcacacgg agagctaccg gggggagccc
      241 atcccccagg cgttgatgga cgccatgggc gagttcgtca ccgaaggctt caaaagcggc
      301 tacctgaagg acacggcggg gctcaagccc acggccgagg gcttccgggt gcgcttgagc
      361 aaaaaccagc tcaaggtgac cgatggaccg ttcaccgaga gcaaggaagt ggtgggcggc
      421 tacgccatcg tcgaggtcgc ctcgaaggag gaagcgttga agatcgcgcg gcagttcatg
      481 gagctgcacc gcgtgcactg gccggcgttc gaaggagagt ccgaggtgcg gccgctcgag
      541 gacatgtagc cggttcccgg cccgcctagt cccgcatgaa gtggcagctg taaccaccag
      601 gatgcttccg cagatagtcc tggtggtacc cctccgcgct gtaccacgtc cccgccggct
      661 cgatgctcgt cgtgatcggc cgcttccact tgcccgaggc ctcgactcgc gccttcaccc
      721 gctccgccgc ggcccgctgc tcgggcgtct gcggaaagat cgccgagcga tactgcgtcc
      781 cgacgtcgtt cccctggcgg ttgagggtgg tcgggtcgtg cagccggaag aaccagcgct
      841 ccagcaggtc ctcgtagctg agcaccgacg ggtcgaaggt gatccgcacg gcctcggcgt
      901 ggcccgactt gctgtcgtgc gtatcgtcgt acgtcggatt cggcagccag ccgccggtgt
      961 agccgacgtc ggtgtcgagc acgccgggca cggcgcgcag gatctcctcg acgccccaga
     1021 aacagccgcc cgccagcacg gccacctcgg tctgctgccc ggcgacggcc gagcgagccc
     1081 ctctctcctg ctcgttcatg gcgatgcttc cctcggatcg tgtccgtcct cagatcggcc
     1141 gggtcggctg acccgtctgc gtcgaaatta atccgttccc gggtactcct ctacttgcgg
     1201 gaccgagggc gcaccgtccg cacacgctgg tcgggcggac tagctgagga gcttggcgag
     1261 cgagggctcg atgagcccgc ggaacagacg gtctgcgtca cccgcgggaa gcgggctgtc
     1321 gctctccacc caccagttca ggaccagcgc gaaggtcgag gcgatccatt ggaccagcag
     1381 ctccggtgaa gcgtggctct tcgggcggcg gcgtagcgcc gtcctgactt cgtcctcgat
     1441 gagctgggtg atggcgtgct gaagacgctc gtgcatcgcc cttcgccccc gggggtccat
     1501 ggtcgcaccc ccggcgcggc gatgctcttc gatgtgctcg agaattggaa gactgaacca
     1561 gacgagactc tcccacggct tcgccggaac tcgcctccca ccagccggcc ctgcagagct
     1621 cagcatgcca tggatgccgc tgagcagcag ctcgtcctta tcccggaaat gcgtgtagaa
     1681 ggttgaccgg ccgacgttcg cgcgtgccag tatctccttg accacgatat cgtcgtaggg
     1741 cttctcgcga atcagcgcgg cgagcgcgtc gcgcagcagc gcttcggtct tctggatccg
     1801 gcgatccttc gtccgtcctt cgtgcatggt ggaatcgtcc gcttctcggg gatgccggac
     1861 agaacgacgg ggttgtccgg tatcgcacat ggcgtcagtg ctgttcttca ctctccaccg
     1921 ctcaaggtta ccgtacgggt cggctgatgt cgatgggctt catcaggcat ccaggagagt
     1981 tccgtgacga acacaaaggc gagccacccg gtacccggca ccaagggccg agtcctccac
     2041 tcggccgctg gctacgacct gctggcctgg ctcttcctgc ttggcaggga gcgtgccttt
     2101 cgcgagcgcc tggtgcggct ggcgcgcttc cagcccggcc agtcggtact ggatattggg
     2161 tgcgggacgg gatcgctggc gatcgcggcg aaacggcggg tcggcccgtc cgggaccgtg
     2221 gaggggatcg acgcatctcc agagatgatc gccagagcga agaagaaggc cagccaggcc
     2281 ggcttggctg tggccttcac cgatggtgtc gtggaagcgc tcccgtttcc ggacgcacgt
     2341 ttcgacgcgg tgttgagcac gctgatgctg caccatttgc cgcgcgaagc gcgccagcag
     2401 tgtgcccgcg
//
LOCUS       DASYRV010000646         8634 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_3945809, whole genome shotgun sequence.
ACCESSION   DASYRV010000646 DASYRV010000000
VERSION     DASYRV010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8634
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3945809"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..824
                     /locus_tag="VGQ24_17040"
     CDS             <1..824
                     /locus_tag="VGQ24_17040"
                     /inference="COORDINATES: protein motif:HMM:NF013252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HEV8456602.1"
                     /translation="VDAVRALPARELILDGEVLALRPDGTPHPFQITMSRFGRRLDID
                     QMRKESPLTPFFFDVLYLDGGPLVDEPARRRLAALSELATAPMIVPRLITDSAVEAER
                     FFRTALERGHEGIMAKALDAPYEAGHRGRRWLKVKLANTLDLVVLAAEWGHGRRHGWL
                     SNLHLGARDPVAGGFVMLGKTFKGMTDEMLDWQTKKLLELELARDGITVYVRPELVVE
                     TAFNEVQASTQYPGGVALRFARIKRYRTDKTAAEADTIAAVRDIYRRMTGVEIQG"
     gene            826..3183
                     /locus_tag="VGQ24_17045"
     CDS             826..3183
                     /locus_tag="VGQ24_17045"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEV8456603.1"
                     /translation="MFDLRSHLSRALEGRYLLERELGRGGMATVYLAHDLKHDRPVAL
                     KVLHPELARALGPDRFLREVRLCARLQHPHILGVYDSGDAEGQLWFTMPFVEGETLRS
                     RLAREKQLPVDDALRITREIADALHYAHQHGVIHRDIKPDNILLTGYPTRDRGASGGY
                     HALVADFGIAQALTTGADERLTETGVAVGTPQYMSPEQAVGERELDPRTDVYSLGCVL
                     YEMLTGEPPYTGPTPQAVVAKRLSEPVPHLRTSRDVPQAIERAVTRALARSPADRFPT
                     AAEFAEALEMGRVGNGFRKPMARPATLAAALLLLLLGGYVVLRQAKPGAAARVASAAV
                     LPFVDLSPQKDQEYFSDGLTEELITSLSQVPGLRVAARTSSFQFKGRSPDVHEVGRKL
                     DVGAVLEGSVRKSGNRLRISTQLISVKDGYQLWSESYDRDLADVFAVQEDIARSIVAA
                     LRVHLAPARDSALAARPTKDLQAYDLYLKGRFAWNQRTGPALREAVRYLEQAVARDST
                     FPRAWAGLADAYLLVVPYAGGSPADTWRRAQAAANKALALDSTLAEAYTSLAYGTMIY
                     GWDWPSAEQSFRRAIKADPSYPTGHHWYGDFLAGRGRLDESLREMRRAHELDPLSRQI
                     GAELGWVYYLMRRSDEAAAQIRQTLELDPNYAQGHFRLGLVQIQQHHYPEAIASLKRA
                     IDLGAFYPLAAAGLAFAYAVSGDREAAMRVVNDLKRRSARELVPPVHIAIAYAGLGDA
                     TRGLEWLNRGIDQRDIYIPENFFEPLLDPLRKDPRFGLVLTRMGL"
     gene            3233..3793
                     /locus_tag="VGQ24_17050"
     CDS             3233..3793
                     /locus_tag="VGQ24_17050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456604.1"
                     /translation="MVTLGSLWLPIVLSAVLVFIASSIIHMVLKYHNKDYSPLPNEDA
                     ARAAIRAGNPPPGQYIIPYCSDMKAMEKPEVKQKYIEGPVGVLNLMRPGLPKMGNYLS
                     QWFVFILVVSFFIAYIAAYSIPAGARYLEVFRVVGAIGFLAYAAGQLPAAIWMGKPWK
                     VAWKEAFDGLIYGLVTAGTFGWLWPR"
     gene            3818..5398
                     /locus_tag="VGQ24_17055"
     CDS             3818..5398
                     /locus_tag="VGQ24_17055"
                     /inference="COORDINATES: protein motif:HMM:TIGR00831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015385 - sodium:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006885 - regulation of pH [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter"
                     /protein_id="HEV8456605.1"
                     /translation="MAVFELVIALLLVGAVLAAGARRLNLPYPALLALGGAGLALLPN
                     VPSVSLDPQLALALFVAPVLLDAAYDASPRDLKRYWRPVTSLALVTVGVTVVTVALVA
                     RWLVPALPWAAAVALGAIVAPPDAAAATTVLRQLHPPHRVMVILEGESLFNDATALII
                     YRLAVAAAVTGSFSGWSVIPTLAVVALGSIVLGAVLSRLMLFISSRIEDVATAVVVQF
                     LSTFGVWILAERLGLSGIITVVVYAILVARQAPDVVPARIRVPSYAVWEVVVFVLNAL
                     AFILVGLQLKPILRRLDTAELITYTMVAVGVCAAVILVRIIWVMGYVAVARWAGGRRT
                     RAPMEYPSFRVGAVVAWCGMRGTVTLAAALALPDGPSGEAFPYRDLILFTAFCVVLGT
                     LVLQGMTVRPLMRKLALHDDGSVEREVQLARAETARAALDAVDHAASDHELLQLLRRK
                     YQDRIRRAERRAGSPSTGGGGESDFTGVQRQAQAAERRILFDLRAQGVIGDDAFHRVE
                     EELDWAEMHREGMARSEQ"
     gene            5400..6131
                     /locus_tag="VGQ24_17060"
     CDS             5400..6131
                     /locus_tag="VGQ24_17060"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEV8456606.1"
                     /translation="MAAYVALGDSMSTDHYPTCDVRELDLPPDRLDPLGAAALLYRND
                     DVRWPEFRGWDLEHRFPGVEFLNLAEDGAMIDDVTTEELARLGRDSDDPDILLTLTAG
                     GNDLLDALAADRQLDKAVRQIERRYTDLVESVREELRYATFILTTVYDPTDGTGRLSG
                     LDAYGPLPLEYLRQFNDHVRETARTTPRTALADVHRHFLGHGVSALERERWYWRRNLI
                     EPNARGASEIRRAWWQLLDELPAVQ"
     gene            6229..7263
                     /locus_tag="VGQ24_17065"
     CDS             6229..7263
                     /locus_tag="VGQ24_17065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456607.1"
                     /translation="MRRSSLLLAGSAWLGALACGDGGTGPAVDNDGRRLAAQFERLAD
                     SVDAGGYSPAAEALRHAAEIVRLTGHASPVTLTIDGAARNFLAVAEQIDFPNLECTWP
                     SDSGRIEPGDTIVVPPADSTDVVPPDSTIVLPPSGEPPTPPECHVVGTFSMRTLIAWE
                     PEHMAEVVRIVADVGSNVVATGVPDVMTGLPSTVAADPSGSPTAPPDSAPAGGGGGSG
                     GYPGFLGEYLVRDVGSWWAVEGTQSNDLVGASGACTDDRATFDWAEFSCEAASFRFEF
                     GMTVEPLRYERLTGVVDPPNSPEGSHTLSLGSSSVDGVRLTWVAWTPPPLPPEPGPDP
                     VPVDSGVVSR"
     gene            complement(7267..7563)
                     /locus_tag="VGQ24_17070"
     CDS             complement(7267..7563)
                     /locus_tag="VGQ24_17070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456608.1"
                     /translation="MHFFGMIFWLAILWIAFRAFRRRERWTMMGPRGYGRYGGWYDSS
                     EFYAPRPRGIEPKSREKLQDQQEYIDSLETRVSELEERLDFTERLVAGRGQVTS"
     gene            complement(7611..8210)
                     /locus_tag="VGQ24_17075"
     CDS             complement(7611..8210)
                     /locus_tag="VGQ24_17075"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEV8456609.1"
                     /translation="MCNPRDDWGFGPGFPFGGRWWAGAWQAKGRGPRRRSQMFESGEV
                     KFVILRLLKEKPRHGYEVIKALEEKLGGYYTPSAGTVYPTLQLLEDEGYVRAVDTDGK
                     KVYHVTPEGERYLEQHKDLLEEILDRVRETVRDFTGGGIGELQGAFVHLAGVTFKRAW
                     RRGPDDPALKRVAEILKKAAEDIEQAWTAGQQGSGAESA"
BASE COUNT         1367 a         2890 c         2791 g         1586 t
ORIGIN      
        1 tggtggacgc agtgcgagcg ctccccgccc gggaactcat cctcgacggc gaggtgctcg
       61 cgctccgccc cgacggcacg ccccatccct ttcagatcac catgagtcgg ttcggtcgta
      121 gactcgacat tgaccagatg cgcaaggaat cccccctcac accgttcttc tttgacgtgc
      181 tttacctcga cggtggtccc ctcgtcgacg agccagctcg ccggcgcctg gccgctctct
      241 cggagcttgc caccgcgccg atgatcgtcc cccggctcat caccgactcg gcggtcgaag
      301 cggaacgctt cttccgcacc gcgctcgagc gaggccatga ggggatcatg gctaaggcgc
      361 tcgacgcccc ttatgaggcg ggacaccggg gccgccgctg gctcaaggtc aagctggcga
      421 acaccctcga tctcgtcgtg ctggccgctg agtggggcca cggacgccga cacggctggc
      481 tgagcaacct tcaccttggc gcccgggatc cagttgccgg cgggttcgtg atgctgggga
      541 agaccttcaa ggggatgacc gacgagatgc tcgattggca gacgaaaaag ttgctggagc
      601 tcgagctcgc ccgggatggg atcaccgtct acgtccgccc cgagctggtc gtggagaccg
      661 ctttcaacga ggtgcaggcg agcacccagt atccaggtgg ggtggcgctg aggttcgccc
      721 ggatcaagcg gtaccggacc gacaagaccg cggcggaagc ggatacgata gcggcggtcc
      781 gggatattta ccgcaggatg acaggcgtgg agatccaagg gtagcgtgtt cgatcttcgg
      841 agccacctct cgcgcgcatt ggagggtcgc tacctcctcg agcgcgagct cggccgcggt
      901 ggcatggcca ccgtctacct ggctcatgac ctgaagcatg accgtcccgt ggctctcaag
      961 gtgctccacc ccgagctggc tcgggcgttg ggccccgacc gttttcttcg cgaggtccgg
     1021 ctctgcgccc gcctgcaaca cccgcacatt ctcggggtgt acgattcggg cgacgccgag
     1081 gggcagctct ggttcaccat gccgttcgtc gagggtgaga cactgcgaag ccggctcgcg
     1141 cgggagaagc agttgccggt cgatgacgcg ctgcgtatca cccgtgaaat cgccgatgcc
     1201 ctccactacg cccatcagca tggcgtgatt caccgcgaca tcaagccgga caacatcctg
     1261 ctcaccgggt accccacgcg cgaccgaggc gcgtcgggcg gttatcacgc cctggtagcc
     1321 gacttcggga tcgcgcaggc actcacgacc ggggcggatg aacggctgac ggagaccgga
     1381 gtcgcggtag gtacgccgca gtacatgagc ccagagcagg ccgtgggcga gcgggaactc
     1441 gatccgcgca ccgatgtcta ctccctcggc tgcgtgctct acgagatgct gaccggagag
     1501 cctccctaca ccggtccgac tccccaggca gtcgtggcaa agcggctgag cgagcctgtg
     1561 ccccatctgc gcaccagtcg cgacgtgccc caggcgatag agcgcgcggt gaccagggcg
     1621 ctggcccggt cgccggccga tcggttcccc accgcggccg agttcgccga ggcattggag
     1681 atggggcggg tggggaacgg cttccgaaaa ccaatggcgc ggccggccac gctcgcagcg
     1741 gcgctgcttc tccttcttct gggaggatat gtcgtgctcc gtcaggcgaa gcccggggcc
     1801 gcggctcggg tggcctcggc cgcggtgctc cctttcgtgg acctgagccc acagaaggat
     1861 caggagtact tcagcgacgg gctcaccgag gagctcatta cctcgctgag ccaagtgccg
     1921 ggactccgcg tcgcggcccg gacttcctcc ttccaattca agggacggag ccctgatgta
     1981 cacgaggtcg gccggaagct cgacgtcggc gccgtgctag aggggagcgt gcggaagagc
     2041 gggaaccgcc tccgtatcag tacccagctc atcagcgtga aggacgggta tcagctctgg
     2101 tccgagtcct acgatcgcga cctggcggac gtgtttgccg tacaggagga catcgcgcga
     2161 tcgatcgtcg ccgcgcttcg ggtccatctc gcgcctgccc gcgactcggc cctcgccgcc
     2221 cgccccacca aagacctcca ggcctacgac ctgtacctca agggtcggtt cgcctggaac
     2281 cagcgcactg ggccggctct acgggaagcg gttcgttacc tggagcaggc tgtcgcgcgg
     2341 gactcgacct tcccgcgtgc gtgggcgggt ctggccgacg cctacctcct cgtggtccca
     2401 tatgccggtg gctctcccgc ggatacctgg cgtagggccc aggcggctgc gaacaaggcc
     2461 ctggcgctcg acagcacatt ggccgaggcg tatacgtcac tcgcatacgg caccatgatc
     2521 tatgggtggg actggcccag cgctgagcag agctttcggc gcgccatcaa ggccgatccg
     2581 agctacccta ccggccacca ctggtatggg gacttcctgg ccgggcgcgg ccggctggac
     2641 gagagcctcc gggagatgcg ccgggctcac gagttggatc cgctgtcgcg tcagatcgga
     2701 gccgagctgg ggtgggtgta ctacctcatg cgccgcagtg acgaggcagc ggcgcagatc
     2761 cgccagactc tcgagctcga ccccaactat gcccagggcc atttccggct cggcctggtc
     2821 cagatccagc aacaccacta ccccgaggcc atcgcctctc tcaagcgtgc gatagacctg
     2881 ggcgcgttct atcccctggc cgctgccggg ctcgcgttcg cctatgccgt gtcgggtgat
     2941 cgggaggcgg cgatgagggt cgtgaacgat ctgaagcggc gctcggcccg ggagctggtc
     3001 ccgccggttc acattgccat cgcgtacgcc ggtctgggcg atgcgactcg cggcctcgaa
     3061 tggctgaatc ggggcatcga ccagcgagac atttacatcc cggagaattt cttcgagccg
     3121 ttgctggatc cactgcggaa ggatccgagg ttcggactgg tgttgacgcg gatgggtctc
     3181 tagcggacct tatgcggtcc ccggtctcca tttcccgaca ccctgaggcc ccatggtcac
     3241 cctcggctcc ctctggctcc ccatcgtcct ctccgcggtg ctcgtcttca tcgccagcag
     3301 catcatccac atggtgctca agtaccacaa caaggattac agcccgctcc caaacgaaga
     3361 cgcggcccgg gccgccatcc gggccggtaa tccccctccc gggcagtaca tcatccccta
     3421 ctgctccgac atgaaggcca tggagaagcc tgaggtcaaa cagaagtaca tcgaaggacc
     3481 cgtcggcgtg ctgaacctca tgcgcccggg actgcccaag atgggcaact acctgtccca
     3541 gtggttcgtc ttcatcctgg tggtctcctt cttcatcgcc tacatcgccg catactcgat
     3601 tcccgcaggc gcgcgctacc tggaggtgtt ccgggtcgtc ggcgcgatcg gcttcctggc
     3661 gtacgccgcg ggccagctcc ctgctgccat ttggatgggg aagccctgga aggtggcctg
     3721 gaaggaagcg ttcgacgggc tcatatacgg attggtgacg gcgggaacat tcgggtggct
     3781 ttggccgcga tgaaatagtt acgcggttgg tgccttcatg gctgtcttcg agctagtcat
     3841 agccttgctt ttggttggtg ctgtgctggc ggcgggagcc cgccggctga acctccctta
     3901 ccctgcgctg ctcgcgctgg gaggcgcggg ccttgcgctc ctccccaatg tgcccagcgt
     3961 gtcgctggac cctcagctcg cgctggctct cttcgtggct ccggtcctgc tggatgcggc
     4021 ctacgacgcc tcaccgcgcg atctgaagcg gtactggcgc cccgttacgt cgctcgcctt
     4081 ggtcacggtg ggagtcaccg tggtcacggt ggctcttgtg gcgcggtggt tggtgcccgc
     4141 gctcccctgg gcggcggcgg tcgcgctcgg ggccattgtg gcgccacctg acgcggcggc
     4201 cgccaccacg gtgctgcgcc agctccaccc gccccaccgg gtaatggtga tcctggaggg
     4261 ggagagtctg ttcaatgacg ccaccgcgct gatcatctac cgcctggcag tcgccgcggc
     4321 ggtgaccggc agcttctccg ggtggagcgt gatccccacg ctcgccgtcg tggcgctcgg
     4381 cagcatcgtg ctcggggccg ttctctcccg gctgatgctc tttatcagta gccggatcga
     4441 agacgtcgcc acagctgtcg tggtacagtt tctttcgacc tttggtgtgt ggattctggc
     4501 cgagcgcctc ggcctttccg gaatcatcac ggtcgtggtc tacgcgatcc tggtcgcccg
     4561 ccaggcgccg gacgtggtac cggcgagaat acgggtcccg tcctacgcgg tatgggaggt
     4621 cgtggtcttt gtcctcaacg ctctggcctt cattctggtg ggtctccagc tcaaacctat
     4681 actccggcgt ctggacaccg ctgagttgat cacgtacacg atggtagctg tcggggtgtg
     4741 cgccgccgtt attctggttc gcatcatctg ggtgatggga tacgtcgcgg ttgcgcgatg
     4801 ggcaggaggt cgccggaccc gcgctcctat ggagtacccc tccttccggg taggcgcggt
     4861 ggtcgcctgg tgcggcatgc ggggcaccgt gaccctggcc gcggccctgg ccctgcccga
     4921 cggcccgagc ggagaggcct tcccctatcg cgacctcatc ctcttcaccg ccttttgtgt
     4981 cgtgctcggt accctcgtgc tgcaaggcat gaccgtgaga ccgctcatgc ggaagctggc
     5041 gctgcatgat gacggctcgg tcgagcgcga ggtgcagctc gcgcgcgcag aaacggcgcg
     5101 tgccgctctc gacgcggtgg accacgcggc aagtgatcac gagctgctcc agctgctccg
     5161 ccggaaatac caggatcgaa tccgtcgggc cgagagaagg gcgggctccc cttccaccgg
     5221 cggcggtgga gaatcggatt tcaccggagt gcaacgccag gctcaggccg ccgagcggcg
     5281 gatcctcttc gacctgcggg cgcagggagt gatcggggat gacgcctttc accgggtgga
     5341 agaggaatta gactgggccg agatgcatcg ggaaggtatg gcgcggagtg agcagtaaag
     5401 tggcagccta tgtcgcgctc ggcgattcca tgagcaccga tcactacccc acctgcgacg
     5461 tccgcgagct ggatctgccg ccggaccggc tggacccgct cggtgcagcc gccctgctgt
     5521 atcgcaacga cgacgttcgt tggcctgagt tcagagggtg ggacctggag caccgctttc
     5581 ccggggtgga attcctcaac ctggccgagg acggcgccat gatcgacgac gtcaccaccg
     5641 aagagctcgc ccgcctcggc cgggactcgg atgatccgga cattttgctg acccttacgg
     5701 ctggcgggaa cgatctgctc gatgccctgg cggctgatcg gcagttggat aaggcggtga
     5761 ggcagatcga gcggcgctac accgacctgg tcgagagcgt gcgggaggag ttgcggtatg
     5821 cgacattcat tctgaccacg gtatatgacc ctaccgacgg gaccggcaga ctctccgggc
     5881 tcgacgccta cggccctctg ccgctagagt acctccgcca gttcaacgat cacgtgcgag
     5941 aaacggcccg taccacaccc cggacggcgc tggccgacgt gcaccggcat ttcctcggtc
     6001 acggcgtgtc ggcactggag cgggagcggt ggtactggcg ccgcaacctg atcgagccca
     6061 acgcccgggg ggcaagcgag atcaggagag cgtggtggca gctgctcgac gagctgcccg
     6121 cggttcaatg agcaacgacg gtctttcctg atctcgccgc cgagacatcc cgctggtata
     6181 ctctctcaag tagaggcgac gattcggccc taaaccaagg gaggcgggat gcgccgcagt
     6241 tcactgttgc tggccggctc ggcgtggctt ggcgcgctcg cctgcggtga cggtggaacc
     6301 ggccccgcgg tcgataacga cggccgtcga cttgccgcac aattcgagcg tcttgccgat
     6361 tcagtggacg ccggtggtta ctctcccgcc gcggaagcgc tgcggcatgc ggcggagata
     6421 gtccgactca ccggacacgc ctcgccggtc actctcacca tcgacggtgc cgcgcgcaac
     6481 ttcctcgcgg tcgccgagca gatcgacttt cccaatctcg aatgcacctg gccctccgat
     6541 agcgggcgga tcgaacccgg ggataccatc gtcgtgcctc cggccgacag cactgacgtg
     6601 gtcccccccg acagcaccat cgtcctgcca ccttcggggg agccaccgac gcctcccgag
     6661 tgccacgtcg tcggcacctt ctccatgcgc acgctgatcg cctgggagcc ggagcatatg
     6721 gcggaggtcg tccggatcgt cgcggacgtg gggagcaacg tagtggcgac cggcgtgccg
     6781 gatgtgatga ccggattgcc gagcacggtc gccgccgatc cctcgggttc acccaccgcg
     6841 ccgccggata gcgctcctgc tggaggcggc gggggatcag gcggctatcc ggggttcttg
     6901 ggcgagtacc tggtgcggga cgtggggagc tggtgggcgg tcgagggcac tcagtcgaat
     6961 gatctcgtcg gcgcatcagg cgcctgcacc gacgatcggg cgacgttcga ctgggccgag
     7021 ttcagttgcg aggcggcgag cttcagattc gagttcggga tgacggtaga gccgctccgc
     7081 tacgagcggc tcaccggcgt cgtcgatccc ccgaatagtc cggagggaag ccacacgctc
     7141 tcgcttgggt cgagcagcgt ggacggggtg cggctcacct gggtggcgtg gaccccgcca
     7201 ccgctgccgc cggagccggg cccggatcca gtgccggttg attccggcgt agtcagccgc
     7261 tgagctctaa cttgtcactt ggccgcgtcc cgcaaccagt cgctcggtaa agtccagccg
     7321 ctcctccagc tcgctcaccc gagtctcgag cgagtcgatg tactcctgct ggtcctggag
     7381 cttctcccgg ctcttcggct cgatcccccg gggccgggga gcgtagaact cgctggagtc
     7441 ataccagccg ccgtaccggc cgtagccgcg tggacccatc attgtccagc gctccctgcg
     7501 ccggaaggct ctgaaggcga tccagagtat cgctagccag aagatcattc cgaagaagtg
     7561 catcgttcct ccctcagtgt tgccgaacca cgccttattg ttgcctccag ttacgcgctc
     7621 tctgccccgc tgccctgctg ccccgccgtc caggcctgtt caatgtcttc cgcggccttc
     7681 ttgagaatct ccgcaacgcg cttcagcgcg ggatcgtccg gccctcgccg ccacgcccgc
     7741 ttgaacgtca cgccggcgag atggacgaat gctccctgga gctcaccgat cccaccgccg
     7801 gtgaagtcgc gcaccgtctc ccgcacccgg tcgagaatct cctccaggag gtccttgtgc
     7861 tgttcgaggt accgttcgcc ttccggcgtc acgtggtaca ccttcttccc gtcggtgtcg
     7921 accgcacgca cgtagccctc gtcttccagc agctgaagtg tcgggtagac cgtgccggcc
     7981 gagggggtgt agtagccgcc cagcttctct tcaagcgcct tgatcacctc gtaaccatgg
     8041 cggggctttt ccttgagcag gcggaggatc acgaacttca cctcgcccga ctcgaacatc
     8101 tggctccggc gcctcggacc ccggcccttt gcctgccaag cgccggccca ccagcggccg
     8161 ccgaagggga aacccgggcc gaagccccag tcatcacgtg ggttacacat ttcgaacctc
     8221 ctttgatcct tccgctattc cgtacgaact tacgtacgat atatcgtaag aaatagcgtg
     8281 ccattcgtca agacccctgg ccgacgagtc cgaaggagac agtcttcccc aagcaaggac
     8341 tgtcacctac attggtccgg ctctctgtga gcatgagcgg aacctttcca agtacatccc
     8401 tgttccgacc ctcttgccct gtaacgccgg cgcgatggcg caggtggcag cttctccctc
     8461 cgtgtccgaa ggagcgtaac cgatgtatag gagcctgacg gcggtagcca tgttcagcct
     8521 ggcgctggcc gcgtgtagtg attccccaac cgcagtgaat tccgagaccg agcccagcca
     8581 ggctgccgcc tcgtcaggcg ccccgtcggt cgccgggcgc tttatcgtca ccct
//
LOCUS       DASYRV010000647         4850 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2887860, whole genome shotgun sequence.
ACCESSION   DASYRV010000647 DASYRV010000000
VERSION     DASYRV010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4850
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2887860"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1015)
                     /locus_tag="VGQ24_17080"
     CDS             complement(<1..1015)
                     /locus_tag="VGQ24_17080"
                     /inference="COORDINATES: protein motif:HMM:NF028222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEV8456610.1"
                     /translation="MKAIAVYPGKPSTMHLRELTKPGVAEIPNGRGVLVKVLRVGVDG
                     TDKEINAAEYGAAPPGYDFLITGHESFGRVEAVGANVTELVPGDYVVATVRRPGSSIY
                     DQIGTYDMTTDDMYYERGINLRHGYLSEYYVDDAEYIVKIPPGLKDVAVLLEPTTVVE
                     KGIAQAYEIQRRLRVWRPKRAAVMGAGTIGLLAALALRLRGLQVTVFGRTPAPYLNSD
                     LVEALDARYESTATTPIAEGAGKYGPFDLIFEATGASSVVFESMLALGKNGVLVLSSV
                     TGGDHRIEVPADRINLEFVLGNKVMVGTVNANREYFEMGVKDMAHAEAQYAGWLKRLL
                     THPV"
     gene            complement(1097..2176)
                     /locus_tag="VGQ24_17085"
     CDS             complement(1097..2176)
                     /locus_tag="VGQ24_17085"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEV8456611.1"
                     /translation="MRKLLVLAVLFNAPTAYAQYREPWKGAGAAPVQAASTAQAPAAP
                     AGAVRAEAVAMVGLTVSDMERSVQFYTRVLDFEKVSDNELVGREYEQLEGVFGARIRV
                     VRLRLGGEYLQLTEYLAPKGRPAPVDARSNDRWFQHVAIIVSDMDRAYTRLRQFKVQH
                     ASTGPQLLPKTIPGAAGIRAFYFRDPDGHPLEVLQFPPDKGDPKWHRPSNRLFLGIDH
                     TAIVVGSTRASLAFYRDLLGFRVAGESMNFGTEQEHLNNVEGARLRITGLRAAAGPGV
                     EFLEYLTPKDGRPFPSDARANDLIHWQTTVLVPNAAAAAAAVRRGAFRLASPGPVELP
                     DTILGFRRGFLVRDPDGHVVQLVEP"
     gene            complement(2235..3854)
                     /locus_tag="VGQ24_17090"
     CDS             complement(2235..3854)
                     /locus_tag="VGQ24_17090"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEV8456612.1"
                     /translation="MSSSHYDIIIIGTGAGGGTLAYRLASSGKRILLLERGDYVPREQ
                     DNWSTRAVNVDGKYQTKEKWRDKAGKELHPHTNYWVGGNTKFYGAALFRLRREDFGEL
                     THHGGLSPAWPITYEELEPYYTEAEQLYQVHGERGEDPTEPPATAPYRYPAVSHEPRI
                     QQLSDDFARLGLKPFHTPLGIMLDEKNRARSRCIRCGTCDGHPCLVSAKSDAQVVCVD
                     PALEHSNVTLLTGAYVTRLETSASGRQVTRVQVERNNEQESYSADIIVSACGAINSAA
                     LLLRSVSDQHPRGLANGSDVVGRHYMGHVNSVLMALSRCPNPTVFQKSLAVNDFYFGS
                     KEWAHPMGHISFVGKLDGVTLSAGAPAIAPGWTLDLMGKHSLDFWLTSEDLPDPENRV
                     TVDRQGKIVLSYTPNNGEGHKRLIAKLEILMNQQSSCPIHGRDCHQGLFSRNLFVGQR
                     IPLAGVAHQNGTVRFGRDPATSALDPTCRAHEVDNLYVVDGSFFPSSGAVNPALTIMA
                     NALRVGDHILERLGARKGATTTTGRAAPVAA"
     gene            complement(4049..>4850)
                     /locus_tag="VGQ24_17095"
     CDS             complement(4049..>4850)
                     /locus_tag="VGQ24_17095"
                     /inference="COORDINATES: protein motif:HMM:NF038123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="spondin domain-containing protein"
                     /protein_id="HEV8456613.1"
                     /translation="RAQYQQPWVGPAIPAQQTTGHDQVLVAQRSTASASAARRKAAAP
                     TAVTATRFSIRIENVSKGEVLKLSNGKTAAFVSAPVLWVIHNGSTNPIFVAGKRDAGQ
                     GLELLAETGNPTDLVKSLTGQSGIAAVGAAAKPVGAATEGPIPPGQKYEFEIVAEPGQ
                     VLSTAWMFGQSNDLFYSNDRPITLFDASGKPRSGEMTAQLSLWDAGTEVNEEPGLGAN
                     QGPRQATPDAGVTERQGIAHVHDKYNYPRTADVLRLTVTPAADAMSAR"
BASE COUNT          794 a         1547 c         1614 g          895 t
ORIGIN      
        1 tcaccggatg ggtgagcagg cgcttcagcc aacccgcgta ctgggcctcg gcgtgcgcca
       61 tgtccttcac gcccatttcg aaatactccc ggttggcatt cacggttccc accatcacct
      121 tgttgccgag cacgaactcg agattgatcc ggtcggcggg cacctcgatg cggtgatcgc
      181 caccagtcac gctggagagg acgaggacgc cgtttttgcc cagcgccagc atgctctcga
      241 acaccacgga ggatgcaccg gtggcctcga agatcaggtc gaaggggcca tacttgccgg
      301 ctccttcggc gatcggcgtg gttgccgttg actcgtagcg ggcgtcgagc gcctcgacca
      361 gatcagagtt gaggtagggt gccggcgtgc ggccgaacac cgttacctgc agtccccgaa
      421 gtcggagggc cagtgccgcc agaagcccga tggtgccggc acccatgacc gcggcccgct
      481 tcggccgcca gactcgcagc cgtcgctgga tctcgtatgc ctgggcgatc cccttctcca
      541 ccacggtggt gggctcgagc agcacggcca cgtccttgag acccggcggg attttcacga
      601 tgtattcggc gtcgtccacg tagtactcgc tcaggtagcc gtggcgcagg ttgatgcccc
      661 gctcgtagta catatcgtcg gtggtcatat cgtaggtacc gatctggtcg tagatgctcg
      721 atcccgggcg gcgcacggtc gctacgacgt aatcgccggg cacgagctcc gtaacgttgg
      781 cgccaacggc ctcaacccgt ccaaagctct cgtgaccggt aatcaggaag tcatagcccg
      841 gcggcgcggc gccatactcg gcggcattga tctccttgtc ggtgccgtcg acgcccaccc
      901 ggagcacctt gaccagcaca ccgcgcccat tggggatctc cgccacgccg ggcttggtga
      961 gctcgcgcag gtgcatggtg ctcggcttgc cgggatagac cgcgatggcc ttcatgaggg
     1021 tcccatctgg tttggcgccg gactcgctcc gcttagaagc aggcgcctgg gttgtgcttg
     1081 gcatcgaatc aattcctcag ggttcgacca gttggacgac atgaccgtcg gggtcgcgaa
     1141 ccagaaatcc tcggcggaat cccaggatgg tgtcgggcaa ctccaccggt ccgggtgagg
     1201 cgagacgaaa tgcaccgcga cgaactgcgg ccgccgcggc cgccgcattg gggaccagca
     1261 ccgtggtctg ccagtggatc agatcgttgg cgcgggcatc gctcggaaat ggacggccgt
     1321 ccttgggggt caggtactcc agaaactcga cccccgggcc ggccgcggcg cggagccccg
     1381 tgatgcggag ccgagcgccc tcgacattgt tcaaatgctc ctgctcggtg ccgaagttca
     1441 tgctttcgcc ggctacccgg aagccgagca ggtctcgata gaacgcaaga ctggcgcggg
     1501 tgctcccgac tacgatggcc gtgtggtcga tgccgagaaa gaggcgattg ctcgggcggt
     1561 gccacttcgg atcccccttg tccgggggga actgaagcac ctcgagtgga tgcccgtcag
     1621 gatcccggaa atagaaagcc cggataccgg ccgcacccgg aatggtcttc ggcagcagct
     1681 ggggacccgt ggatgcgtgc tgaaccttga actggcggag ccgcgtgtag gcccggtcca
     1741 tgtcgctcac gatgatggcg acgtgctgaa accagcggtc gttgctccgg gcgtccaccg
     1801 gagccggccg ccccttgggg gcgaggtatt cggtcagctg aaggtattct ccgcccaacc
     1861 tgagccggac tacccgaatc ctcgcgccga acacaccctc cagctgctcg tactcccgtc
     1921 ctaccagctc gttgtcagag accttctcga agtcgagcac gcgggtgtag aactggaccg
     1981 agcgctccat atccgagacg gtgagcccca ccatggcgac cgcttcggcc cggaccgcgc
     2041 ccgccggagc cgctggagcc tgagcggtgc tcgcggcttg cacgggagcc gcgcccgcgc
     2101 ccttccaggg ctcgcgatac tgggcgtacg cggttggagc attaaacagg acagctagaa
     2161 ctagaagctt cctcatcccg tccctcggtc gctccgctct ctcgggatga ggagcggggt
     2221 atcgttgaga ggagtcatgc cgccaccggc gcggcacgtc cggttgtcgt cgtggcaccc
     2281 ttccgcgcac ccaaccgctc gaggatgtga tcaccgacgc gcagcgcatt tgccatgatc
     2341 gtgagggccg gattcaccgc gccgctcgac ggaaaaaagc tgccgtcaac gacatacagg
     2401 ttgtccacct cgtgcgctcg gcaagtgggg tcgagcgctg acgtcgcggg atcccttccg
     2461 aaacgcacag tgccgttctg atgcgccacg ccggcgagcg gaatccgctg tcccacgaag
     2521 aggttgcggg agaagagacc ctgatggcag tcgcggccgt gtatcgggca gctggactgc
     2581 tggttcatga ggatctccag cttggcgatg agccgcttgt ggccttcccc gttattgggc
     2641 gtgtaggaga gcacgatctt gccctgccgg tccaccgtta cccggttctc gggatcgggc
     2701 aggtcctccg acgtgagcca gaaatccaag gagtgcttgc ccatgagatc gagcgtccag
     2761 cccggcgcga tggccggcgc tccggccgag agggtgactc cgtcgagctt gccgacgaac
     2821 gagatatggc ccatggggtg ggcccactcc ttcgacccga agtagaagtc gttcaccgcc
     2881 aggctcttct ggaataccgt cgggttgggg cagcgggaga gcgccatcag caccgagttg
     2941 acgtgtccca tgtagtgccg cccgaccacg tcggagccgt tggccagccc acgggggtgc
     3001 tggtcgctga cggaacgcag caggagcgcg gccgagttga tcgccccgca ggctgagacg
     3061 atgatgtcgg cgctgtagct ctcctgctcg ttgttgcgct cgacttgaac ccgggtcacc
     3121 tgacggccgg atgcgctggt ctcgagtcgg gtgacatacg cgcccgtaag cagggtgacg
     3181 ttcgagtgct ccagcgccgg atccacgcag acgacttgcg catcggactt ggcagatacg
     3241 aggcaggggt gaccgtcgca agtgccgcat cgaatacagc ggctacgcgc ccggttcttc
     3301 tcgtcgagca tgatgccgag cggggtgtgg aacggcttga gtcccagccg ggcaaaatcg
     3361 tcactcagct gctggattct gggctcgtgg ctcacagccg ggtagcggta tggagcggtt
     3421 gcgggcggct cggtgggatc ctcgcctcgc tcgccgtgca cctggtagag ctgttccgct
     3481 tcggtgtagt acggctccag ctcttcgtaa gtgatcggcc atgcgggcga gaggccgccg
     3541 tgatgggtca gctcgccgaa gtcctcccgc cggagtcgga agagcgccgc gccatagaac
     3601 ttggtgttgc caccaaccca gtagttggtg tgcgggtgca gctcctttcc ggccttgtcg
     3661 cgccacttct ctttggtctg gtatttcccg tcgacgttga cggcgcgggt gctccagttg
     3721 tcctgctcgc ggggcacgta gtcgccgcgc tcgagcaata ggatgcgctt accggaggag
     3781 gcgaggcggt atgcgagtgt gccgccgccg gcgccggtgc cgatgatgat gatgtcgtag
     3841 tgagaagagg acatgccttg caccggttga ttgttcacaa gctgagcgga agaaaacagc
     3901 gtaagcggtg agcgggagcc attgtcttcg gacctgggag acctctgcga tttccggagt
     3961 caagctgcca ggtcctcgga gcttgccctg agcgcagatg tctgatgcga actcctcacc
     4021 gctaccgccg taccgccgtg ccgccctact acctcgcact catcgcatcc gcggccggcg
     4081 tgaccgtcag ccgcagcaca tcggccgtcc ggggatagtt gtacttgtcg tgcacgtggg
     4141 cgatcccctg acgctccgtg acaccggcgt ccggcgtcgc ctgccgcggg ccctggttgg
     4201 cgccgaggcc cggctcctcg ttgacttccg tccccgcgtc ccacagcgag agctgggccg
     4261 tcatctcgcc cgaccttggc tttcccgagg cgtcgaacag ggtgatcggc cggtcgttcg
     4321 aatagaagag gtcgttggac tgaccaaaca tccaggcggt ggagagcacc tgtccgggtt
     4381 cggctacgat ctcgaactcg tacttctggc cgggcggaat aggaccctcg gtcgccgcac
     4441 ccaccggttt ggcggcggcg ccgaccgcgg cgatgccgct ctggccggtc agtgacttga
     4501 ccaggtcggt tgggttgccg gtttcagcca gcagctcgag cccctgcccc gcgtcgcgct
     4561 taccggcgac aaagatcggg ttggtgctcc cgttgtgaat cacccagagc accggggcgg
     4621 agacgaatgc cgcggtctta ccgttggaga gcttgagcac ctcgcccttc gagacgttct
     4681 cgatccggat gctaaaccgg gtggcagtca cggcggtcgg cgcagcggcc ttccgccggg
     4741 cggccgaagc cgaagcagtc gagcgctgcg ccacgagcac ttgatcgtgg ccggtggttt
     4801 gctgagctgg gattgccggt cccacccaag gctgctgata ctgtgcgcgg
//
LOCUS       DASYRV010000648         2963 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2891477, whole genome shotgun sequence.
ACCESSION   DASYRV010000648 DASYRV010000000
VERSION     DASYRV010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2963
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2891477"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..644)
                     /locus_tag="VGQ24_17100"
     CDS             complement(<1..644)
                     /locus_tag="VGQ24_17100"
                     /inference="COORDINATES: protein motif:HMM:NF017911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456614.1"
                     /translation="MSTRTGFAPITLVLGEEELLAERAVSDAVDAAREELGPETTVEE
                     VQGGSLPDGFAMGLATASLFGGGRVVVVQGADALDAAGRQAVLAMARDPSPTTVMVLR
                     AEGVGRQGKFFKDLQEHANVVTVARLKPSERSSWLRAEVRRLGRKADDGLVAALIDTV
                     GQDLRELAGAVAKLHVAVPPPAPLQARHVTEFLTKTADRRGYELTDAILAGEPAT"
     gene            complement(724..1218)
                     /locus_tag="VGQ24_17105"
     CDS             complement(724..1218)
                     /locus_tag="VGQ24_17105"
                     /inference="COORDINATES: protein motif:HMM:NF025468.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4276 family protein"
                     /protein_id="HEV8456615.1"
                     /translation="MNIPRPIRIGRDRLLKIGELERAVDLAARRVDRPGGVLIVIDAD
                     DDCPATQAPDLVGRASRSRSDIPIGVVLANREFEAWFLAGAESLRGHRGLPSSLEPPR
                     EQVRGAKEWLRSRMGPVRTYSPTVDQPALTQALDLHLTRKASRSFDKCWREIARLVDP
                     QARS"
     gene            complement(1320..2534)
                     /locus_tag="VGQ24_17110"
     CDS             complement(1320..2534)
                     /locus_tag="VGQ24_17110"
                     /inference="COORDINATES: protein motif:HMM:NF024700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEV8456616.1"
                     /translation="MAGSRFLRRVVITNYKSIGGCDITLEPLTFLVGPNGAGKSNFLD
                     ALRFVADALNRTVDHALRDRGGINEVRRRSGGHPIHFGIRLDFELPAGVTGSYAFRVG
                     SRSRKGFEVQREDCVVHHPEALGESSRFRVISGEVESTIKTVPPATPDRLYLTIASGL
                     PEFRSLFDTLSQMGFYNLNPDKIRELQPPDPGFLLARDGSNLASVLGVLSSLDPSATE
                     RVEEYLRRLVPGVEGVSQRPIGPRETIEFRQQVAGAGSPWRFLAVSMSDGTLRALGVL
                     AALFQSGSGPSSAARLVGIEEPEVALHPAAAGVLLDALREASRRVQVVVTSHSPDLLD
                     SDDIDTASLLAVTADQGVTVIGAVDEVGRSTLRDRLFTPGELLRLDQLTPDPKAKEVA
                     VGRQLNIFESMP"
     gene            complement(2660..>2963)
                     /locus_tag="VGQ24_17115"
     CDS             complement(2660..>2963)
                     /locus_tag="VGQ24_17115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456617.1"
                     /translation="LAALVAIAEHTSTLPTASLSLSGPTRLVPTAAVIACTVLARRRA
                     AALALEREMEGQRWRRFRSMEPRADEGVEGPGSGSEARTAPEDIPRPPGTPRRLGL"
BASE COUNT          501 a         1028 c          955 g          479 t
ORIGIN      
        1 gtcgccggct cccccgccag gatcgcgtcg gtgagctcgt agccgcgccg gtcggccgtc
       61 ttggtcagga actcggtgac gtgcctggcc tgcagcggcg ccggcggtgg cacggccacg
      121 tgcagcttgg ccaccgcccc cgccagctcc cggaggtcct ggccgaccgt gtcgatcagc
      181 gcggcgacca gcccgtcgtc cgctttgcgg ccgagccggc gcacctccgc ccgcagccag
      241 ctcgaccgct ccgacggctt cagccgggcc acggtcacca cgttggcgtg ctcctggagg
      301 tccttgaaga acttgccctg ccggccgaca ccctcggccc gcagcaccat gaccgtggta
      361 gggctcgggt cgcgcgccat cgccagcacc gcctggcgcc cggccgcgtc gagcgcgtcc
      421 gcgccctgca cgaccaccac cctgccgccg ccgaacagcg aggcggtggc caggcccatc
      481 gcgaacccgt ccggcagcga gccgccctgt acttcctcga ccgtggtctc gggtcccagc
      541 tcctcccgag ccgcgtcgac cgcgtcggac accgcccgct cggcgagcag ctcctcttcg
      601 ccgagcacca gcgtgatcgg cgcaaaccca gttcgagtgc tcatgccggg gatgctaccg
      661 gtccacacct ccccacacac ggatttccag cgctttcccg cccaccttcg gggcatgagg
      721 cggctacgaa cgcgcctgcg gatcgaccag ccgtgcgatc tccctccagc acttgtcgaa
      781 ggagcgggac gccttgcgtg tcaggtgaag atccagcgct tgggtcaggg ccggctggtc
      841 aactgtcggt gagtaggtcc ggactggccc catcctgctc cgaagccatt ccttggcgcc
      901 ccgaacctgc tccctcggag gttcgaggct ggacggcagg ccgcggtgtc cacgtagcga
      961 ttctgctcca gcaagaaacc atgcctcgaa ctcccgattg gcaaggacca ccccgatcgg
     1021 aatatcagac cgggaccggg atgcccgtcc taccaggtcg ggcgcctgcg tagctgggca
     1081 atcgtcgtcg gcatcgatca cgatgaggac gcctccggga cgatccactc tgcgcgccgc
     1141 caggtcgacc gctctctcaa gttcaccgat cttgagcagt cgatcccgtc cgatcctgat
     1201 cgggcgtgga atgttcaaga cgactgagga gtcgatctcc agagtgatcc ggcgtaccaa
     1261 gaggggaaca gcgatactct cgccgtgtca ctccaccaca cagctgatgg aaatgttgct
     1321 cacggcatgc tctcgaaaat gttgagctgc cggccaaccg cgacctcttt ggccttgggg
     1381 tcgggagtga gctgatccag ccgcaatagc tcgcccggcg tgaacaggcg gtcacgcagg
     1441 gtggagcggc caacctcatc gaccgcgcca atcaccgtca caccctggtc cgccgtgacg
     1501 gcgaggagcg aggctgtatc aatgtcgtcg ctgtcgagca gatcaggact atggctcgtc
     1561 acgacgacct gcacccgacg gcttgcctct ctcagcgcgt ccaagagcac tccggccgcc
     1621 gcgggatgta gcgccacctc tggctcttcg ataccaacga gtcgagcagc ggagcttggg
     1681 ccgctcccgg actggaacag cgccgccaag accccgaggg cgcggagggt gccatcggac
     1741 atgcttacgg ccagaaaccg ccaaggactg cccgcacccg ccacctgctg gcgaaactcg
     1801 atggtttctc tcggacctat cggcctctgg ctcacgccct cgaccccggg aacgagccgc
     1861 cgcaggtatt cctcgactct ctcggttgcg gatggatcca gactgctgag cacaccgagc
     1921 acgctcgcga gattgctccc atcccgtgcg agaaggaatc caggatccgg cggctgcaat
     1981 tcccggattt tgtcaggatt gagattatag aaacccatct gagagagcgt gtcgaacaga
     2041 gaccggaact ccggcaggcc acttgcgatg gtcagataga ggcgatccgg tgttgcgggg
     2101 gggacggtct tgatcgtgct ctcgacctct ccagagatga ctctgaaacg gcttgactca
     2161 cctagggcct ctggatgatg cacgacgcaa tcttcacgct ggacctcgaa ccccttgcgg
     2221 gatcgcgagc ccacgcgaaa ggcgtagcta ccggtgacgc ccgccgggag ctcgaagtcc
     2281 agccggatcc caaagtggat cggatgacca cccgaccgac ggcgaacctc gttgattccg
     2341 ccacgatcgc ggagggcgtg gtccacggtc ctgttgaggg cgtcggcgac aaatcgcagg
     2401 gcatccagga agttgctctt cccggcaccg ttgggcccaa ccaggaacgt gagcggctcc
     2461 agggtgatgt cgcagccgcc gatgctctta tagttggtga tcacgacccg cctgaggaac
     2521 ctcgaaccgg ccacggccct cctgtgctgg cgtacgggta acagcagacg ggtcgaccgc
     2581 ccggtcgccc catcctccgg atctgcggaa ggccagcagt ctacagtcgc cgtgacgctg
     2641 tcgtgcgcga agggcgaggt cacagcccca acctccttgg ggtgccgggt ggcctcggaa
     2701 tgtcctctgg cgcggtccgc gcctcgctgc ccgagccggg accttcaaca ccctcgtcag
     2761 cgcgtggctc catggaacgg aagcgccgcc atcgctggcc ctccatttcg cgttcgaggg
     2821 ccagcgctgc cgcgcggcgg cgggcgagga cggtgcaggc gatcacggcg gcggtgggaa
     2881 ccagccgggt cgggccggac agggacaggg aggcggtggg gagggtgctg gtgtgctcgg
     2941 cgatggcgac aagggcggcg agg
//
LOCUS       DASYRV010000649         1898 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2894671, whole genome shotgun sequence.
ACCESSION   DASYRV010000649 DASYRV010000000
VERSION     DASYRV010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1898
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2894671"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..937)
                     /gene="dnaN"
                     /locus_tag="VGQ24_17120"
     CDS             complement(<1..937)
                     /gene="dnaN"
                     /locus_tag="VGQ24_17120"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEV8456618.1"
                     /translation="MKFTITREQLQEGLAAVAAAIPAKTTLPVLANVLVEATKQGLRL
                     SGTDLDIAVSTTVPADVDADGAVTLPAKKLVDIARELPAGPVRVTAAGEARVSIESGR
                     SKFKLLGLPREEFPSFPTVKFDKAWKAAAGVVHKLVGHVAFAASTEESRPILNGVLWE
                     LRPDRMRMVATNGHRLAKMDVPATGGQAADLIVPPKALEQIRRLYAGDAEIEVAKSDN
                     HIGFRAGGTLVFSRLIEGPYPNYEQVIPRENDKAATVDKAAMAAALRRMSIVASDQTH
                     RIRMAFTNGACKMSVQTPDLGEAQEELAVAYEGDPL"
     gene            complement(1182..>1898)
                     /locus_tag="VGQ24_17125"
     CDS             complement(1182..>1898)
                     /locus_tag="VGQ24_17125"
                     /inference="COORDINATES: protein motif:HMM:NF012529.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEV8456619.1"
                     /translation="EGKEMTQEEFFHTFNALFEAHKQIVLTSDRPPKEIPGLEDRLIS
                     RFEWGMVADIGHPDLEHRIAILRKKAEQDHLELTIPDDVLRFIAEHIRSSVRELEGCI
                     IKLLLFASLKNREVTIELAREALSDKIRQGEEGSGYGSQSTPSIDRVQEVVARRWGVT
                     PEGLRSKARTKTLTIPRQVAMYLARDMLGMQLVEIGQAFGGRDHSTVIHSVDKVERQM
                     MRDRTFKERVEMARQELSAL"
BASE COUNT          295 a          654 c          580 g          369 t
ORIGIN      
        1 ccagcgggtc gccctcgtag gccaccgcca gctcctcctg cgcctctccc agatccgggg
       61 tctgcaccga catcttgcag gctccgttag taaacgccat ccggatccgg tgggtctggt
      121 cgctcgccac gatgctcatg cggcgcagcg ccgccgccat cgccgccttg tcgacggtcg
      181 cggccttgtc gttctcgcgc gggatgacct gctcgtagtt ggggtacggc ccttcgatca
      241 agcgggagaa gaccagcgtg ccaccggccc ggaagccgat gtggttgtcg ctcttggcca
      301 cctcgatctc cgcgtcgccc gcgtagagcc gccggatctg ctcgagcgcc ttggggggca
      361 cgatcaggtc ggccgcctga ccgcccgtcg ccggcacgtc catcttggcg agccggtggc
      421 cattggtcgc caccatgcgc atccgatccg gccgcagctc ccagaggacg ccgttcagaa
      481 tcgggcggct ctcttcggtg gaggcggcga acgctacgtg ccccaccagc ttgtgcacga
      541 cacccgccgc ggccttccac gccttgtcaa acttcacggt cgggaacgag ggaaactcct
      601 cccgcggcag gcccaggagc ttgaacttgg agcgccccga ctcgatcgac acgcgagctt
      661 cacccgcggc cgtcacgcgc accgggccgg cggggagctc gcgggcgatg tccaccagct
      721 tcttggccgg taacgtcacc gcgccgtcgg cgtccacgtc ggccgggacc gtggtgctga
      781 cggcgatatc cagatcggtc cccgacagtc gcagcccctg cttggtggct tcgacgagca
      841 cgttggcgag caccggcaag gtcgtcttgg caggaatggc cgccgccacc gctgccaagc
      901 cttcctggag ctgttcccgc gtgatcgtga acttcatgcg tgccgaatcc gtctcccaat
      961 gggggaaagt cttactgctt ctatactata tagaatacta gtagtagtag tagagaccgg
     1021 ggatatgtgg gtgacgtacg gtaactcgcg tcgcccacgc cgtctctggc atcccacctc
     1081 atgttggcgc actgtggggg ttgttggcgc attgcggatt actggtcgcc tttccccacc
     1141 acccaacatg ctgcgccgtt atccccaaag aacaatgttt gttaaagggc ggacaattcc
     1201 tgccgcgcca tttcgacccg ctccttgaac gtccgatccc gcatcatctg gcgctcgacc
     1261 ttatccacgc tgtggatcac tgtggaatgg tcccgcccgc cgaacgcctg accgatctcc
     1321 accagctgca tgcccagcat gtcccgcgcg aggtacatcg ccacctggcg cgggatggtg
     1381 agggtcttgg tgcgcgcctt ggagcgcagc ccctccggcg tgacgcccca gcggcgcgcc
     1441 accacttcct gcacccggtc gatactgggc gtggactggc tcccgtagcc ggacccttcc
     1501 tcgccctggc ggatcttgtc cgacagcgct tcgcgggcca gctcgatcgt cacttcccgg
     1561 ttcttcagcg aggcgaacag tagcagtttg atgatgcatc cctcgagctc gcgcacgctc
     1621 gagcgaatat gctcggcgat gaaccgcagg acatcgtcgg ggatcgtgag ctcgaggtgg
     1681 tcctgctccg ccttcttgcg caggatggcg atgcgatgct cgaggtcggg gtgcccgata
     1741 tcggcgacca tcccccactc gaaccgcgaa atcaggcgat cctcgaggcc ggggatctcc
     1801 ttgggcggcc ggtccgacgt caacacgatc tgcttatggg cttcgaacag cgcgttgaac
     1861 gtgtggaaga attcctcctg cgtcatttcc ttgccttc
//
LOCUS       DASYRV010000650         2468 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2896208, whole genome shotgun sequence.
ACCESSION   DASYRV010000650 DASYRV010000000
VERSION     DASYRV010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2468
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2896208"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..436)
                     /locus_tag="VGQ24_17130"
     CDS             complement(<1..436)
                     /locus_tag="VGQ24_17130"
                     /inference="COORDINATES: protein motif:HMM:NF014696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEV8456620.1"
                     /translation="MIRIAPEGRWFIAGAWAIALALVFAAVHYGTLPWWIVTLGCLAL
                     AVWVVAFFRDPQRTVPRDECLVLAPADGKVVSVVETDEPAFFGGRALRISIFMNVFNC
                     HVNRYPTGGMVGYRHYNRGKFGHAAAEKSSLDNEQSSVGLTTE"
     gene            complement(433..1374)
                     /locus_tag="VGQ24_17135"
     CDS             complement(433..1374)
                     /locus_tag="VGQ24_17135"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEV8456621.1"
                     /translation="MTHSLRSGQALAGSRLPLPLLRQGKVREVYEVDAERLLLVASDR
                     VSAFDVVMNEPVPRKGAVLTQISAFWFEHLAPVFPSHYLTARTSDIIQRVPGLHDYES
                     EITGRAMLVHRAAPVPFECVVRGYLSGSAWAEYRVRGTLAGEPLPAGLAESSRLDPPL
                     FSPATKAETGHDTNVTFETVAGMLGRTLAEQLRAASFAIYQAGRAHAADRGIIIADAK
                     FEFGTDAEGTLRLIDELLTPDSSRFWPTDSYAPGRTQPSFDKQPLRDYLASIKAAGRW
                     NGEAPPPPLPDEVVDATSRRYLEAFRLLTGRELGDDL"
     gene            complement(1371..>2468)
                     /locus_tag="VGQ24_17140"
     CDS             complement(1371..>2468)
                     /locus_tag="VGQ24_17140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HEV8456622.1"
                     /translation="LVMRDGLRLLLGRLIAVLGALERFASRNAGLPCLAYTHFQPAQL
                     TTVGKRATLWMQDFALDVEEICRRIETMRFRGCKGTTGTQASFLELFGGDHERVRELD
                     RRVTAKLGFKESFPVSGQTYTRKLDSGVLDTLSGIAQSAAKLAGDLRLLQHEGELLEP
                     FESEQVGSSAMAYKRNPMRAERIGGLARFVIALQANTGNTAAAQWLERTLDDSANRRL
                     TLPEGFLATDAILVLATNIAAGLEVREEVILRHVGDQMPFMATERWLLLGVSAGGDRQ
                     ALHEVIRRHSLAVAETVSRGQPNDLLERLATDPAFRGVPATALLAELQPSNYTGRASQ
                     QVTEFLEEYLQPLLARARPLAAEAEAAEVGV"
BASE COUNT          422 a          817 c          828 g          401 t
ORIGIN      
        1 gctcggtcgt gagcccgacc gacgactgtt cgttgtcgag actggacttc tccgccgcgg
       61 catggccgaa cttgccgcga ttgtagtgcc gataaccgac cataccgccg gtcggataac
      121 ggttcacatg gcagttgaag acgttcatga agatggagat ccgtagcgcc cggccgccga
      181 agaacgccgg ctcatcggtc tcaaccacgc tgacgacctt accgtccgcg ggtgccagga
      241 ccaagcactc gtccctcggg actgtgcgct gcggatcgcg aaagaaggcc acgacccaga
      301 ctgccagcgc gaggcaaccc agggtgacga tccaccaggg cagggtgccg tagtgcaccg
      361 ccgcgaatac gagcgccagt gcgatcgccc aggcgccggc gatgaaccac cggccttccg
      421 gcgcgatgcg gatcaaaggt cgtctcccag ctcgcgtccc gtcaggagcc tgaatgcctc
      481 gaggtagcgc cggctggtag catcgaccac ctcgtcgggg agtggcggcg gcggcgcttc
      541 tccgttccag cggcctgccg ccttgatcga cgcgagatag tcgcgcaacg gctgcttgtc
      601 gaagctcggc tgtgtccggc caggcgcgta gctatcggtc ggccagaagc gagacgagtc
      661 gggtgtcagc agctcgtcga tcaggcggag ggtgccttca gcgtcggtcc cgaactcgaa
      721 cttggcgtcg gcgatgatga tcccgcgatc ggcagcgtgg gcccggccgg cctgatagat
      781 cgcgaagctt gcggcacgca gctgctccgc cagggtccgg cctagcattc ccgcaacggt
      841 ctcgaatgtc acgttggtat cgtggccggt ttcggcttta gtggccgggg agaagagtgg
      901 cggatcgagg cgtgagctct ccgccagtcc ggccggcaac ggctcgccgg cgagtgtgcc
      961 gcggactcga tactctgccc aggccgatcc ggaaagatag ccgcgtacca cgcactcgaa
     1021 cggcaccggc gctgcccggt ggaccagcat ggcccgccca gtgatctcgc tctcgtagtc
     1081 gtgcagcccc ggcacgcgct ggatgatgtc cgaggtgcgt gcggtgaggt agtgggaagg
     1141 gaagaccggg gccagatgct cgaaccagaa ggcgctgatc tgggtcagga ccgcgccctt
     1201 ccgcggaacc ggctcgttca tgacgacgtc gaaggcactc acccgatcgc tcgcgaccag
     1261 cagcaggcgc tccgcgtcca cctcatatac ctcgcggact tttccctgcc tgagcagcgg
     1321 cagcgggagc cggctcccgg ccagggcctg ccccgagcgc agcgaatggg tcatactccc
     1381 acctcggcgg cttcggcctc agcagccagt ggacgggcgc gggcgagcag tggctggagg
     1441 tattcctcga gaaattcggt cacctgctgc gacgcccggc cggtgtaatt gctcggttgc
     1501 agctcggcta ggagcgccgt ggcgggcact ccgcggaacg caggatcggt cgcgaggcgc
     1561 tccagcaggt cattgggctg gccgcggctt accgtctccg caacggccag gctgtgccga
     1621 cgaatgacct cgtgcagcgc ctgccggtcg ccgcccgcgg acaccccgag cagcagccac
     1681 cgctccgttg ccatgaacgg catctggtcg ccgacgtggc gcaaaatgac ctcttccctg
     1741 acctccaagc cggcggcgat gttggtggcg agcaccagaa tagcatcggt ggccaggaag
     1801 ccctcgggca gagtcaaccg gcggttggcg ctgtcatcga gggttcgctc cagccattga
     1861 gcggcggccg tatttccggt gttcgcctgc aaggcgatca cgaatcgcgc taggccaccg
     1921 atgcgctcgg cgcgcatcgg atttcgcttg taagccatgg cgctggagcc gacctgctcc
     1981 gactcgaacg gctcgagcag ctcgccctcg tgctgcagca gccgaagatc tccggcgagc
     2041 ttggccgccg actgcgcaat tccgctgagc gtgtcgagca cgccactatc cagtttccgg
     2101 gtgtaggtct gacccgagac cgggaacgac tccttgaacc cgagcttagc cgtgacccgg
     2161 cgatccagct cccggacccg ctcgtggtcg ccaccgaaca gctcgaggaa cgaggcctgg
     2221 gtgccggtag tgcccttgca gccgcggaaa cgcatcgtct cgatccgccg gcagatctcc
     2281 tccacatcta gggcaaaatc ctgcatccag agagtggccc gctttccaac ggtggtgagc
     2341 tgggccggct ggaagtgggt ataggccagg catggaaggc cggcattgcg gctggcaaac
     2401 cgttccagcg ctccgagcac ggcaatcagg cggccgagca gcagtcggag cccgtcgcgc
     2461 atgacgag
//
LOCUS       DASYRV010000651         1717 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2900419, whole genome shotgun sequence.
ACCESSION   DASYRV010000651 DASYRV010000000
VERSION     DASYRV010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1717
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2900419"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..742
                     /locus_tag="VGQ24_17145"
     CDS             <1..742
                     /locus_tag="VGQ24_17145"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: protein motif:HMM:NF003792.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEV8456623.1"
                     /translation="YVTLKDAYLSVIEALKHGGFHHGAKVNMTWIPSDELIDANVEEV
                     LSEADGILVPGGFGIRGVEGKVAAIQFARERRIPYLGLCLGLQCAVIEFARNVCGLEG
                     ANSSEFDPSTPHPVIDLLPEQEGVVDKGGTMRLGAYPAELLPGSLAERVYGEPVVSER
                     HRHRYEVNPAYHAALQEHGMVLSGMSPDRRLVEIIELPDHPYFIAGQFHPELKSRPTR
                     PHPLFRDFVGAALARRQGALTEPLAISG"
     gene            751..1239
                     /locus_tag="VGQ24_17150"
     CDS             751..1239
                     /locus_tag="VGQ24_17150"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEV8456624.1"
                     /translation="MEAESSRRVFDGKLIKVDVERWPSGEREVMKHPGACAVVAITAE
                     GEVLLVKQFREAVRQELLEIPAGIIEEGESAEECAARELLEETGYRATKLQHLGSIYT
                     SPGFTNERIELFRAEPERVGDPTEEAVDVVTIPIIRAIEAADRGDIVDLKTLAALLLV
                     RG"
     gene            complement(1236..>1717)
                     /locus_tag="VGQ24_17155"
     CDS             complement(1236..>1717)
                     /locus_tag="VGQ24_17155"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEV8456625.1"
                     /translation="RVLATVMFTDIVGSTETAAAVGDRRWKELLSEHRALVRRQLSAF
                     RATERDTTGDGFMATFDGPARAIGCAHAIIQATGATELEVRAGIHTGECELVEAGLAG
                     IAVHIAARVAAAAGAGEVVVSSTVKDLVAGSGIRFGDLGDHLLKGVPDVWHLYRVGA"
BASE COUNT          287 a          567 c          598 g          265 t
ORIGIN      
        1 gtacgtgacc ctgaaggacg cctacctgtc ggtgatcgaa gccttgaagc acggagggtt
       61 ccaccacggg gccaaggtca acatgacctg gatcccttcg gacgagctga tcgacgccaa
      121 cgtcgaggag gtgctatccg aggccgacgg catcctcgtg ccgggtgggt tcggcatccg
      181 gggcgtggag gggaaggtcg ccgcgatcca gttcgctcgg gagcggcgca tcccgtatct
      241 ggggctctgt ctcggcctgc agtgcgcggt catcgagttc gccaggaatg tctgcgggct
      301 ggagggcgcg aactcctcgg agttcgatcc ctcgacgccg caccccgtca tcgatctgtt
      361 gcccgagcag gagggcgtgg tcgacaaggg cgggaccatg cggctggggg cgtaccccgc
      421 cgagctgctg ccgggaagcc tggcagagcg ggtgtacggc gagccggtgg tgtccgaacg
      481 gcaccgccac cgctacgagg tcaacccggc gtaccacgcc gcgctccagg agcacgggat
      541 ggtgctgtcg gggatgtcgc cggaccggcg gctggtcgag atcatcgagc tgcccgatca
      601 cccgtacttc atcgccggcc agttccatcc ggagctcaag tcgcggccta cccggccgca
      661 cccgctgttc agggacttcg tgggggcggc cctggcccgc cgccaaggcg cgctgaccga
      721 accgctcgcg atctcgggct agcggggctc gtggaggccg agtccagccg ccgcgtcttc
      781 gacggcaagc tcatcaaggt cgacgtcgag cggtggccgt ccggcgaacg cgaggtgatg
      841 aagcaccccg gagcctgcgc ggtggtggcg atcactgcgg aaggagaggt gctgctggtg
      901 aagcagttcc gcgaggcggt gcgccaggag ctgctggaga tcccggcagg gatcatcgaa
      961 gagggggaga gcgcggagga gtgcgccgcc cgggagctgc tggaggaaac gggctaccgg
     1021 gcaacgaagc tgcagcacct ggggtctatc tacacgagcc ccggcttcac gaacgaaagg
     1081 atcgagctgt tccgcgcgga acccgaacgg gttggcgatc caaccgagga agcggtcgat
     1141 gtggtgacga tcccaattat ccgagccatc gaggcggctg accgaggcga catcgtcgac
     1201 ctcaagaccc tggccgcgct gctcttggtt cggggctagg cgccgactcg gtagaggtgc
     1261 cagacgtcgg gcacgccctt tagcaagtga tccccaaggt caccgaaacg gatgccgctg
     1321 ccggcaacca gatctttcac cgtgctcgag acgaccactt ccccggcgcc cgctgctgcc
     1381 gctacacgcg ccgcgatgtg taccgcgatc ccggcgagcc cggcctccac cagctcgcat
     1441 tcgccggtgt ggatccctgc acgcacctcc aactcggtcg ctcccgtggc ttggatgatc
     1501 gcatgcgcgc acccgatggc ccgcgccgga ccgtcgaatg tggccatgaa gccgtcgcca
     1561 gtggtgtcac gctcggtcgc tcggaacgcc gatagctgac ggcgaaccag cgcgcgatgc
     1621 tccgacagca gctccttcca ccttcgatcg ccgaccgcgg ccgccgtctc cgtcgagccc
     1681 acgatgtccg tgaacatgac ggtggccagg acacgct
//
LOCUS       DASYRV010000652         4752 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_2900508, whole genome shotgun sequence.
ACCESSION   DASYRV010000652 DASYRV010000000
VERSION     DASYRV010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4752
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2900508"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1347
                     /locus_tag="VGQ24_17160"
     CDS             <1..1347
                     /locus_tag="VGQ24_17160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HEV8456626.1"
                     /translation="LDLVTRKDTAADFFGEENVPREAITMGVETIFEAREILILATGE
                     HKAEIVRRAVEGEVDHEVAATFLQRHANTTFYLDRPAAAALTRQATPWLLGPVEWNQH
                     LMVRAVTWLSHQAGKAILKLTQRDYAEHHLSSLVALHGSPGALNGEVFNALGAKIRGR
                     SKLPRGKRIICFSPHPDDDVISMGGILHKLAVNGNDIIVAYMTSGNLAVFDHDVRRHI
                     DFIRRLAGEQHIPEAAAAELGQRVDAFLSRKRAGDVDTQEVQDTKRIIRESEAIAGIR
                     TLGLDDRAARFLNLPFYQTGKVRKDPIGPADVTIVRRLLEEQRPDLVFVAGDLSDPHG
                     THRVCKEAIDGALEEYVAAGGSRPEIWLYRGAWQEWPVTEATWLVPLSQEELRLKIQA
                     IFKHQSQKDTAPFPGPDEREFWQRVEARNQGTAAELDRLGLAEYFAMEAYVVEEAP"
     gene            complement(1673..2308)
                     /locus_tag="VGQ24_17165"
     CDS             complement(1673..2308)
                     /locus_tag="VGQ24_17165"
                     /inference="COORDINATES: protein motif:HMM:NF037785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456627.1"
                     /translation="MSGYTPARCKSRRSAAPRPAPGRELDHHRFGAELAKREQSGRSG
                     RRPIIGIMGAGQASSRSLVAARELGTLVAERGWILLTGGRPVGVMAAACAGAKQVRNS
                     LTLGILPGADGAGADVDVAVFTAMGDARNAINVLTSDVVVACGVEGPGTASEVSLALK
                     VGKPVILLAAAQAARDFFESLHTHGRLIRADAPIDVVRLIEADLAIPRWSP"
     gene            complement(2223..2402)
                     /locus_tag="VGQ24_17170"
     CDS             complement(2223..2402)
                     /locus_tag="VGQ24_17170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456628.1"
                     /translation="MHPRLAELVDYATVQRTALLGAVSTVPEPLRDERIHTGSVQIAE
                     IGRAPAGPGPGTRSP"
     gene            2486..3055
                     /gene="dps"
                     /locus_tag="VGQ24_17175"
                     /gene_synonym="pexB"
     CDS             2486..3055
                     /gene="dps"
                     /locus_tag="VGQ24_17175"
                     /gene_synonym="pexB"
                     /inference="COORDINATES: protein motif:HMM:NF006975.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016722 - oxidoreductase activity, acting
                     on metal ions [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein Dps"
                     /protein_id="HEV8456629.1"
                     /translation="MTTRTAPPPQVPRSARTTRDGAATQLFSTKNDLSQSTRAQVSGL
                     LNQRLADCIDLQTQCKQAHWNVKGPSFIALHKLFDEINEDVEEYVDLLAERIVQLGGV
                     AEGTARAVASRSRLEEYPGLIKGQEHVDALSSALATFGHGTRVAINEADELEDPATAD
                     ILTEITRGIDKWLWFVEAHQQDSRARTNQ"
     gene            3383..4249
                     /locus_tag="VGQ24_17180"
     CDS             3383..4249
                     /locus_tag="VGQ24_17180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456630.1"
                     /translation="MSSVAVPFLLLPLRLLAQGAEGQLLAADRAASALSSDSGFVAAL
                     AKSLDRAGVLLWPGAPVVFGADEATRLMLAISARDTMRLTWQPLGIELARDSTLGVTW
                     GVAVMTPRLTPGAPHIGRYTTVWRRDVGRWAISALLVTGAKPVATSLAPGIPLSKSPA
                     PATGPAGHFVAADLAFARLAGDSGAVVAFRTWAAPDAIVSGGSGLLMRGPDAIASGVA
                     GPAMWRWHPVAAGSSRTGDLGWTAGEAVIQPEAGESSYSKYLTVWIRPPGRPIRFLTD
                     GGNARPAAINPR"
     gene            complement(4236..4613)
                     /locus_tag="VGQ24_17185"
     CDS             complement(4236..4613)
                     /locus_tag="VGQ24_17185"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEV8456631.1"
                     /translation="MGETSPYPYATHLNILFDPLERIDVPALVDACTDEWYNQTLCQV
                     NDSIVRLGVVRGEYHWHKHDAEDEFFYVADGRLLIDLEGETVELSPGQAFVVPKGVVH
                     RTRAPERTVMLMVEKVTVVPTGD"
BASE COUNT          821 a         1582 c         1520 g          829 t
ORIGIN      
        1 ctcgatctcg tcacccggaa ggacactgcc gctgatttct tcggtgaaga gaacgtgccc
       61 cgggaagcga tcacgatggg ggtggagacg atcttcgagg cgcgggagat tctgatcctc
      121 gctacgggcg agcacaaggc cgagatcgtg cgccgggcgg tggagggaga ggtcgaccac
      181 gaagtggcgg ccacattcct tcagcgtcac gccaacacga ccttctacct cgaccgcccg
      241 gccgcggcgg ccctgacccg gcaggcgacc ccttggcttc tcggtccggt ggagtggaac
      301 cagcacctca tggtccgggc cgtcacctgg ctctctcacc aggccggtaa ggccatcctg
      361 aagctgactc agcgagacta cgccgagcac cacctgtcat cgcttgtggc cctgcacggc
      421 tcccccggtg cgctcaatgg tgaggtcttc aacgcactcg gcgcgaagat ccggggccgg
      481 tccaagctgc cccggggcaa gcgcatcatc tgtttttcac cgcaccccga cgacgacgtc
      541 atttcgatgg gaggcattct tcacaagctc gctgtcaacg gcaacgatat catcgtggcg
      601 tacatgacca gcggcaacct cgccgtgttc gatcatgacg tccgccgcca catcgacttc
      661 atccggcggc tcgcaggaga gcagcacatt cctgaagcgg cggcagcgga gttggggcag
      721 agagtcgacg cgttcctctc gcggaagcgc gccggcgacg tggacaccca ggaagttcag
      781 gacaccaagc gaattatccg tgagtcggag gcgatagccg gcattcgcac actcggcttg
      841 gacgaccggg ctgcacggtt cctgaatctg ccgttctacc agacggggaa ggtgaggaaa
      901 gacccgatcg ggccagccga cgtgacgatc gtgcgccgcc tgctggagga gcagcgcccc
      961 gatctcgtgt tcgtcgcggg agacctttcc gacccacacg gaacccatcg cgtctgcaag
     1021 gaagcgatcg acggcgcgtt ggaagaatat gtcgcggctg gcggcagccg gccggagatc
     1081 tggctctacc gcggcgcttg gcaggaatgg ccggtcaccg aggccacgtg gctggttccg
     1141 ctatcacagg aggagctccg cttgaagatc caggcgatct tcaagcacca gtcccagaag
     1201 gacaccgctc cctttcccgg ccccgacgag cgcgagttct ggcagcgggt cgaggcgcgg
     1261 aaccagggaa cggccgcaga gctcgaccgg ctggggctgg ccgagtactt cgcgatggag
     1321 gcgtatgtgg tggaggaggc tccctaggca cgtccccgta tcttcgcaac ccaccagcgg
     1381 acccctacca gaagaaaccg ccagtcgtgg aagaactcgg gcggcctgat ggctgccggc
     1441 ataccgccca atccactcgt cccaggatct cccgccgagc atgatcgcct cactgtccgc
     1501 taggattact cgagcacccg gtataccacc cagtgttggg atccgggaac gataaagggc
     1561 gccagcgcat gacgtgcgag gccgaggccc ctacgaaccc gcgagagcgt cgccctgctt
     1621 gccgtatacg atgtcgagat gccactgaca taccagcatg cgtcgctccc ggctatgggc
     1681 tccagcgagg aatggcaaga tcagcttcga tcagccgcac gacatcgatc ggggcgtcgg
     1741 cacgaatcag ccgcccatgg gtgtgcaggc tctcgaagaa gtcgcgtgca gcctgcgcgg
     1801 ccgcaaggag gatgactggc ttccccacct tgagcgccag ggagacctcc gacgcagtgc
     1861 ccggcccttc cactccacag gccacgacta catcgctggt gagcacgttg atcgcgttcc
     1921 gggcgtcacc catcgcggtg aagaccgcaa catcgacgtc ggcgccggca ccgtccgccc
     1981 cgggaagaat gcccagggtg aggctgttcc gaacctgctt ggcgcccgcg cacgccgcag
     2041 ccatgacgcc gacgggccgg ccgccggtca gaaggatcca cccgcgctca gccacgagcg
     2101 tgccgagctc acgagcagcc acaaggctcc ggctgctggc ctgacccgcc cccatgatcc
     2161 cgatgatggg acggcgcccg ctacgtccac tctgctcgcg tttcgccaat tcggccccga
     2221 atctatggtg atcgagttcc cggcccgggg ccggccgggg cgcggccgat ctccgcgatt
     2281 tgcaccgagc cggtgtgtat ccgctcatcc cggagcggct caggaacggt ggacaccgcg
     2341 cccaggagcg ccgtccgttg gacggtagca tagtcgacca gctcggctaa acgcgggtgc
     2401 attggccatc cccggttgct tccctttcgt gctccatcgc gatagagtcg ttgcagggag
     2461 cgcacactcg attggagaga acatcatgac aaccagaacg gcacccccac cacaggtccc
     2521 tcgctcggcc cgtaccaccc gcgacggcgc ggccacgcag ctcttttcca ccaagaacga
     2581 cctttcgcag agcacccggg cgcaggtctc ggggctgctc aatcagcgtc tggccgattg
     2641 tatcgatctt cagacccagt gcaagcaggc gcactggaac gtgaagggcc ccagcttcat
     2701 cgccctgcac aagctcttcg acgagatcaa tgaggacgtc gaggagtacg tggacctgct
     2761 ggccgaacgc atcgtccagc tcgggggcgt ggccgagggc acggctcggg ccgtggcctc
     2821 gcgttcgaga ctcgaggagt accccggcct gatcaagggc caggagcacg tggacgcgct
     2881 ctcgtcggcc ctggcgactt tcggccacgg gaccagggta gccatcaacg aggcggatga
     2941 gctggaggac ccggccacgg cggacattct gaccgaaatc acccgtggta tcgacaagtg
     3001 gttgtggttt gtcgaggccc accagcagga cagccgagca cgcacaaatc aataagcccg
     3061 taggttcatt ccatggggca tccggtcagg cgcgcactgc tcctcttctg gcgcgcggta
     3121 cggcttcggt gtccgaactg tggcggaggt cccatctttc gctcgtggtt ccggatgcgt
     3181 ccctactgcc ccgcgtgcgg gcttccgctc gagcgcgggg accagggcta cctggccttc
     3241 gacttgcttt tccgtccggc cacccgggaa gagctttcct gattcccgct cgaatcccgc
     3301 gccagccgcc tacgtaggga gaaccaccaa gctctggttc cccgtcttca ataagggcat
     3361 gatgcggatt cgacccatgg gcatgagtag cgtcgcagtc cccttcctgc tgttaccgct
     3421 ccggctcctg gctcaagggg ccgagggcca gctgctggcc gcggaccggg cagcctcggc
     3481 cctgagcagc gactctggat tcgttgccgc actggccaaa tcgttggatc gggctggcgt
     3541 gctgctctgg cccggcgccc ccgttgtgtt tggtgccgat gaggccacgc ggctgatgct
     3601 ggcgatatcg gctcgcgaca cgatgcgtct cacctggcag ccgctcggta tcgagctggc
     3661 ccgcgattcg acgctcggcg tcacctgggg ggttgccgtg atgacgccca gattgacccc
     3721 cggtgcgcca catattggcc gctacaccac tgtgtggcgc cgagacgttg gccggtgggc
     3781 catctcggcg ctcctcgtta ccggagcgaa gccggtggcc accagtctgg cgccgggcat
     3841 ccccctgtcg aagtcccctg caccggcgac cgggcctgcc ggccacttcg tggcggcaga
     3901 cctggccttc gcgcggttgg ctggtgacag cggcgcggtg gttgcatttc ggacttgggc
     3961 agcaccggat gcaatcgtct ccggcggatc cggcctgctc atgcgagggc ccgatgccat
     4021 cgcgagcggg gttgccggac ctgcaatgtg gcgctggcac cctgttgcgg ccgggtcgtc
     4081 tcgaacgggt gatctcggct ggaccgcggg tgaggccgtc attcaaccgg aggcggggga
     4141 gtcgagctat tccaagtatc tcaccgtgtg gatccgccct ccggggcgcc cgattcgatt
     4201 tctcaccgat ggcggcaacg cgcgcccggc cgccatcaat ccccggtagg caccaccgtc
     4261 accttctcga ccatcagcat gacggtacgc tcgggggccc gggtccggtg cacgactccc
     4321 ttgggcacga cgaaggcctg accgggtgag agctccacgg tctctccttc caggtcgatg
     4381 agcaagcgac catccgcgac gtaaaagaac tcgtcctccg cgtcgtgctt gtgccagtga
     4441 tactctccac ggacgacgcc gagccgcacg atggaatcgt tgacctggca gagcgtctga
     4501 ttgtaccact catcggtaca cgcgtccacg agggcgggta catcgatgcg ctccagcggg
     4561 tcgaatagaa tgttgaggtg ggtggcgtag ggataggggg atgtttcacc cacagctcct
     4621 cctgcgtacg ggttgtaccg tcttgttttt ctgggcgctt tcgatcctga cagccgacct
     4681 tcagacgtga tcggctacgt cttttatccc gtgctctcgc gcgcagtggg cacagcagta
     4741 gaacgttccc tt
//
LOCUS       DASYRV010000653         5465 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1232913, whole genome shotgun sequence.
ACCESSION   DASYRV010000653 DASYRV010000000
VERSION     DASYRV010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5465
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1232913"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1704
                     /locus_tag="VGQ24_17190"
     CDS             <1..1704
                     /locus_tag="VGQ24_17190"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEV8456632.1"
                     /translation="SRRFTSSGSGSGNQRPTPTMMGPDSSSGSAASWLPPLPSLNGIG
                     RTDFRARAAYSEGAGIYRILPAAVTVPSTTAALRELVRWAAHRRVPLVPRGAGSGMPG
                     GNVGRGVIVDLTTLDGCPIEVHPALRRAYSGAGATLRDLSAEAERWGLRLPPDPSSAR
                     FATLGGMVATNAAGPHSVQSGSTRRWVDALDLITADGDSLTLRRGAVPRPVAAVERFV
                     RNAEPTLRAARQTILNRFPKTRKNSSGYALDAWLASGDLLDLLIGSEGTLAFITGIEW
                     RLVPIPARYAGVRAALRSLDILGDVVRQLDTLDPAALEYLDATFLRFVGEAGGAAGLL
                     LVEFEGEEGEALEGRLREAASILTPHASELREATDRRGLESLWAVRHSASSILAGLGE
                     SRRSLQVIEDACVPLEAIGSYVEAVRRAGQRHGMELVIFGHAGDGNLHVNLQPDVALT
                     GWEERVRAIFAEVSEVVIRLGGSLSGEHGDGRLRARALDSSYGSEIVGLFRLVKEAFD
                     PVGILNPGVKLPAEGDRPFAALKVGGQAAQLPPEIEAGLREIERTAGYSVSRLELADS
                     P"
     gene            1720..2514
                     /locus_tag="VGQ24_17195"
     CDS             1720..2514
                     /locus_tag="VGQ24_17195"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004799 - thymidylate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HEV8456633.1"
                     /translation="MRQYLDLLQHVLQNGRPKADRTGTGTLSVFGWQMRFDLAERFPL
                     ITTKRVHLKSVIHELLWFLRGETNVKSLNEAGVSIWDEWAAPDGELGPIYGYQWRSWP
                     TADGRQIDQIAEVLRLLRCEPHSRRMIVSAWNVGDVPKMALAPCHTMFQFYVLDGKLS
                     CQLYQRSADVFLGIPFNIASYALLTLMLAQVTQLAPGEFIHTLGDAHLYLNHLEQARE
                     QLSREPRMLPKLRLNPAVRELEQFRFEDIVLESYDPHPPIRAPVAV"
     gene            2511..3002
                     /locus_tag="VGQ24_17200"
     CDS             2511..3002
                     /locus_tag="VGQ24_17200"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: protein motif:HMM:NF012413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEV8456634.1"
                     /translation="MIVSLVVAMAENHVIGRAGGLPWHLPKDLQHFKRLTVDHTVIMG
                     RKTFEEIKQPLANRRNVVISRDPSFQPRGATVVPSLEEALAMGATEEEVFVIGGGEIF
                     RLALPRADRLYLTLVHAKVPGDTTFPSFDLATWALEDEEHHPADEKHAYPFTFRRYRR
                     IRH"
     gene            3089..4210
                     /locus_tag="VGQ24_17205"
     CDS             3089..4210
                     /locus_tag="VGQ24_17205"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456635.1"
                     /translation="MAVRIGFAYNEKPSLPAPKKAGDSARPASPLDHVPSSRVLRPDL
                     PQPDLYAEWDEPETIEAVAAALGALGEVIRLEATHDFPRRVKDADPDFVFNIAEGLHG
                     VNRESHVPAICEFLGIPYHASDPLSLALTLHKGRAKEIMAYYGVPTAPFVVVTTRAEA
                     RNLSLPFPLFAKPALEGSGKGITEKSLCPNRAKLLQEVSELLDTYQEPVLIESWLPGQ
                     EFTVAILGNGKEARCLPLVAMRWEALPLGAQPIYGYEAKWLWDTPEHPLDLFECPAKV
                     SKELACDVRSAALSAYRVLGCRDWCRVDVRCDAAGRPMVVELNPLPGILPNPKDNSCF
                     PKAARAAGMSYDSLIQTVADIAWRRISGQALLKRKRAAA"
     gene            4207..5214
                     /locus_tag="VGQ24_17210"
     CDS             4207..5214
                     /locus_tag="VGQ24_17210"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEV8456636.1"
                     /translation="MKIGILFDGGSNDWDQKDVAAVLANVNEIQTELRQAGHETGLIP
                     VQLGDIAWLKRVQRHELVFNLCEGVNGYARYEDFAVAALELSRVPFTGCPAWPVTICH
                     RKHIANTLLAAAGVPVPTFMLARGITPPTGLRYPVIVKPSGEDASVGIDAGAVCATRK
                     ALRDRLARTLEQWNEVLVQEYVAGREVNVGFIGRELLPLSEINFDRMPQGSWPIVTYA
                     AKWNSGCAEDLGTEPVCPAELTPELNRRAIQAARQAWETLAGSQGYGRVDLRITESGE
                     VYVLEVNPNPDLSSDAGLTRMARARGWSYGELILHVVEEALSRYERARTAEAITQNVP
                     A"
     gene            5211..>5465
                     /locus_tag="VGQ24_17215"
     CDS             5211..>5465
                     /locus_tag="VGQ24_17215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456637.1"
                     /translation="MSRTLVAPTLRPLAESDRSLVAAMTQACGMFRPEEVRVALEVFD
                     AALGIGRQRDPDYESAGVELDGTLAGWACWGPTPCTVGTFD"
BASE COUNT          909 a         1810 c         1777 g          969 t
ORIGIN      
        1 tcccggaggt ttacatccag cggcagtgga tcagggaatc agcgcccgac tcccaccatg
       61 atgggtccag acagcagctc gggttcggct gcctcgtggc tccccccgct gccttccctc
      121 aacgggatcg gacggaccga ctttcgcgcc cgtgcagcgt attccgaagg cgccggcatc
      181 tatcggattc tgcccgcagc ggtcacggtg ccctcgacga ccgctgcgct ccgcgagctg
      241 gtcaggtggg cggcacaccg gcgagttccc ctggtgccgc gtggcgccgg cagcgggatg
      301 cccggcggca atgtcggtcg gggagtgatt gtggacctga cgacgctgga cggttgcccg
      361 atcgaggtgc accccgcatt gcggcgcgcc tacagcgggg cgggcgccac gcttcgcgac
      421 ctcagtgcgg aagccgagcg gtggggctta cggcttccgc ccgatccctc gagtgcgcgc
      481 ttcgcgacac tcggtggcat ggtggcgacc aatgcggccg gtccccactc ggtccagagc
      541 ggcagcacac ggcgctgggt cgacgccctc gacctgatca ccgccgatgg cgactcgctg
      601 accctccggc gcggtgcggt cccgcggccc gttgcggcgg tcgagcgctt cgtacggaat
      661 gccgaaccga ccctccgagc cgcgcgccaa acgatcctga accgctttcc caagacccgg
      721 aaaaactctt cggggtatgc gctcgatgcc tggctcgctt cgggcgacct gctcgacctg
      781 ctgatcggct cggagggcac cctcgccttc atcacgggca tcgaatggcg gctcgtcccc
      841 attccggcac gctatgcggg cgtgcgcgcc gcgctgcgca gtcttgatat cctgggcgac
      901 gtggtccgcc agctcgacac gctcgatccc gcagccctcg aatacctcga cgccaccttt
      961 ctgcgcttcg tcggcgaagc gggcggagct gccgggcttc tcctggtgga gttcgagggc
     1021 gaggaaggcg aagcactcga aggccggctc cgcgaggcgg ccagcatcct cactccccac
     1081 gcgtccgagc ttcgggaagc caccgatcgg cgcggcctag aaagcctctg ggccgttcgg
     1141 cactcggcca gctccattct ggcggggctg ggagagagcc gccgttcgct gcaggtcatc
     1201 gaagacgcct gcgttccgct cgaggcgatc ggcagctatg tcgaggcagt acgccgggcg
     1261 ggacaacgcc acgggatgga gctggtcatc ttcggccacg cgggagacgg caacttgcac
     1321 gtgaatctcc aacccgacgt ggcgctcacc gggtgggagg agcgggtccg ggcaatcttt
     1381 gccgaggtct ccgaagtcgt tatccggctt ggcggctcgt tgagtggtga gcatggcgac
     1441 ggacgcctgc gcgcgagagc cctcgattcc agctacggct ccgaaatcgt cggattgttc
     1501 cggctcgtca aagaagcgtt cgacccggtc gggattctca atcccggggt gaagcttccg
     1561 gcggagggtg accgcccctt cgccgcgctc aaggtgggag ggcaggcggc gcaactgccg
     1621 cccgagatcg aagcgggcct gcgcgagatc gagcgaacgg cagggtattc tgtgagtaga
     1681 ttggagcttg ccgatagccc ataggccata gcgatcacca tgcgacaata tctcgacctg
     1741 ctccaacacg tccttcagaa cggccgcccc aaggccgatc gcacgggcac cgggacgctg
     1801 agcgtgttcg gctggcagat gcgcttcgat ctggcggaac gcttcccgct gatcaccacg
     1861 aaacgcgtcc acctcaagtc cgtcatccac gagctgctct ggttcctgcg cggcgaaacc
     1921 aacgtgaagt cactcaatga ggcaggagtt tcaatctggg acgaatgggc tgctcccgat
     1981 ggggagctgg gtcctatata tggataccag tggcgctcct ggccaactgc cgatggtcgg
     2041 cagatcgatc agatcgccga ggtccttcgc ttgcttcgct gcgagccgca ctcacgccgc
     2101 atgatcgtga gcgcctggaa cgtcggcgat gtgccgaaga tggcactggc gccctgccac
     2161 acgatgtttc agttctacgt cctcgacggg aagctctcct gtcagctcta tcagcgcagc
     2221 gccgatgtct tcctcggcat ccctttcaac atcgcttcct acgccctgct caccctgatg
     2281 ctggcgcagg tgactcagct cgcaccgggt gaattcattc acacgctggg cgacgcgcac
     2341 ctctatctca atcacctcga gcaggccagg gagcagctgt cccgggagcc cagaatgctg
     2401 ccgaagctcc ggctcaaccc ggcagttcgg gaactcgagc agttccgctt cgaggacatc
     2461 gtgctcgagt cttacgatcc tcatccgccg atccgggcgc cggtggcggt gtgatcgtct
     2521 cgctggtcgt cgccatggcg gagaatcatg tgatcggccg cgccgggggc ctgccctggc
     2581 atcttcccaa ggatctccag cacttcaagc ggctcaccgt ggatcacacc gtcatcatgg
     2641 gccggaagac cttcgaggag atcaaacagc cgctcgccaa ccgccggaac gtggtgattt
     2701 cccgagatcc ctcctttcag cctcgcggtg cgacggtggt cccctcgctc gaagaagccc
     2761 tcgccatggg tgcgaccgag gaggaagtct ttgtcatcgg cggaggtgag atcttccgcc
     2821 tggcactgcc ccgagcggat cggctctatc tcacgctcgt tcacgccaaa gttccgggcg
     2881 ataccacctt tccatccttc gatctcgcga cctgggcatt ggaagacgaa gagcaccatc
     2941 ctgccgatga gaagcacgcc tacccgttca cctttcgccg ttatcgccgg attcgtcact
     3001 gaaactattg tgccgcttcg cgttttttct taccttaggt cgagcgaagc catcggcagc
     3061 gcttcgttca ccccatcaag gagatccgtt ggcggttcga atagggttcg cctataacga
     3121 gaagccatcg ctgccggcgc cgaagaaagc cggcgactcc gcccgccccg cctcaccgct
     3181 cgatcacgtt ccctcgagcc gcgtcctccg tcccgatcta ccgcagcccg atctctatgc
     3241 cgagtgggat gagcctgaaa cgatcgaggc ggtcgccgct gcgctcggcg ctctcggcga
     3301 ggtcatccgg ctcgaagcga cacacgactt cccgcggcgg gtcaaggatg ccgacccgga
     3361 cttcgtgttc aacatcgcgg aaggcctgca tggggtgaac cgggagagcc acgtcccggc
     3421 gatctgtgaa ttcttaggga ttccttacca tgcctccgat ccgctcagcc tggcgctcac
     3481 gcttcacaag ggccgggcca aggagatcat ggcgtactat ggggtgccga ccgcaccatt
     3541 cgtcgtcgtg acgactcgtg ccgaggcgcg caacctgagc ttgccgttcc cgctcttcgc
     3601 caaaccggcc ctggaaggct ccggcaaggg aatcaccgag aaatcgctct gccccaaccg
     3661 agcgaagctg ctgcaggaag tgagcgagct gctcgacacc taccaggagc cggtcctgat
     3721 cgagagctgg ttgccgggcc aggagttcac ggtggccata ctcggcaacg gcaaggaagc
     3781 gcgctgtctg ccgctggtcg ccatgcgctg ggaggccctg ccgctcggcg cgcagccgat
     3841 ctacgggtac gaggcgaaat ggctgtggga cactccggaa catccactcg acctcttcga
     3901 gtgtcccgcg aaagtctcga aggagctggc atgtgacgtc cggtccgcgg cgctcagcgc
     3961 gtatcgtgtg ctgggctgcc gggattggtg ccgggtggat gttcgctgtg acgcggccgg
     4021 ccgccccatg gtggtcgagc tcaatccgct gcccggcatc ctccccaatc caaaggacaa
     4081 ttcgtgcttc ccgaaggccg cccgcgctgc cgggatgtcc tatgacagcc tgatccagac
     4141 ggtggccgac atcgcctggc gcaggatcag cggacaggcg ctgctcaagc gcaagcgggc
     4201 cgccgcgtga agatcggaat cctgttcgat ggcgggagca acgactggga tcagaaggat
     4261 gtcgctgcgg ttctggcgaa cgtcaatgag atccagaccg agctgaggca ggcaggtcac
     4321 gaaaccggcc tgatccccgt gcagctgggc gacattgcct ggctcaagcg ggtccagcgc
     4381 cacgagctgg ttttcaatct gtgcgagggt gtgaatggct acgcccgcta cgaggatttt
     4441 gccgtagcgg cgctggagct ttcccgggtt cccttcacgg gctgcccagc ctggcccgtc
     4501 accatctgtc atcgcaagca catcgccaac accctgctgg cggcggccgg cgtcccggtc
     4561 cccactttca tgctcgcgcg ggggatcacc ccgccgacgg gactgcgtta cccggtcatc
     4621 gtcaagccat cgggcgaaga tgccagcgtc gggatcgacg cgggagcggt gtgtgccacg
     4681 cggaaggcgc tgcgcgaccg gctggcccgc accctcgagc agtggaacga agtgctggtg
     4741 caggagtacg tcgccggacg cgaggtaaac gtggggttca tcggccggga gctgctgccc
     4801 ctctcggaga tcaacttcga ccggatgccg cagggtagct ggccgatcgt gacctatgcg
     4861 gccaagtgga acagcggatg cgccgaggac ctgggcaccg agccggtgtg tcctgcggag
     4921 ctcacgccgg agctcaaccg gcgggccatc caggctgccc ggcaggcctg ggagacgctg
     4981 gccggttccc agggttacgg gcgggtcgat ctccgcatca ccgagtcggg cgaggtgtat
     5041 gttctcgagg tgaaccccaa tccggatctc tccagcgatg cgggtctcac tcggatggcc
     5101 cgggcgcgcg gctggagcta cggtgagctg attctccacg tggtcgagga agcgctctcg
     5161 cgttacgagc gggcccgcac cgccgaggcc atcacgcaga acgttcctgc ttgagtcgaa
     5221 ccctggtcgc cccgaccctc cggccgctcg ccgaatcgga ccgctcgctc gtcgcagcca
     5281 tgacgcaggc gtgcgggatg tttcgtcccg aagaggtgag ggtcgccctg gaggttttcg
     5341 acgcggccct ggggattggc cggcagcgcg atccggacta cgagagcgcc ggggtcgagc
     5401 tcgatggcac gctcgcgggc tgggcctgct gggggccaac gccatgtacg gtcggaacct
     5461 ttgac
//
LOCUS       DASYRV010000654         2632 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1239757, whole genome shotgun sequence.
ACCESSION   DASYRV010000654 DASYRV010000000
VERSION     DASYRV010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2632
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1239757"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..382)
                     /locus_tag="VGQ24_17220"
     CDS             complement(<1..382)
                     /locus_tag="VGQ24_17220"
                     /inference="COORDINATES: protein motif:HMM:NF015953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HEV8456638.1"
                     /translation="MRSLLLHWILNAAALWVAAALIPGLDFNGGPGRLLLVAAVFGIV
                     NSTLRPLLTVLTCPLIVLTLGLFTLVINALMLLVTGWLSESWNLGFMVSGFWAAFFGG
                     LVVGLVSMVLSLALMPKESPVVSRQ"
     gene            complement(387..1445)
                     /gene="mnmA"
                     /locus_tag="VGQ24_17225"
     CDS             complement(387..1445)
                     /gene="mnmA"
                     /locus_tag="VGQ24_17225"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR00420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEV8456639.1"
                     /translation="MSRRVLVAMSGGVDSSVAAARLVEQGYDVIGATMKLFCYGDDVP
                     DRPCCSLDSINDARDVAHALGIPHYVLNLEDRFNLHVIQNFVSEYSRGRTPIPCVRCN
                     SFTKFRDLLAHADALECDYIATGHYAVARAGGLYRGRDLNKDQSYFLWGIDRNVVARM
                     LTPVGEMSKAETRTYARRLGLTTADKEESVEICFVPNDDYVSVLERHLPADAPALLPG
                     PLITTSGEVVGEHHGYGRYTIGQRKGLPGGSNGARYVVAIRPDRREVVVGRAEDLAGH
                     SVHLDEVNWLADPLRPGDRCEVQIRYRARSAPATVLESSEDRLDLALETPVRAIAPGQ
                     SGVLYGSGGRVLGGGVIG"
     gene            complement(1442..>2632)
                     /locus_tag="VGQ24_17230"
     CDS             complement(1442..>2632)
                     /locus_tag="VGQ24_17230"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HEV8456640.1"
                     /translation="PVYLDYAATTPVRPEVLEAMLPYLTAQSFGNPSSAHRFGRAARA
                     GIEQARRQIAEALGAEPNQVVFTSGGTEADNLGIVGAALAARDRGGQMCVAVSAIEHK
                     AVLAAAHAVCHLGGREVLLPVDGGGRLDLDALDRVLVDCPAVVSVMWVNNEVGMIQPV
                     QEIAGRCQEAGITFHTDAVQAVGKVPVSVSELSCTLLTISGHKIGAPKGIGALIVRDR
                     KAVEAIIHGGGQQFGIRPGTENVAGAVALGRAAQLAAAEQVHLAERLRMLRDDLAARL
                     KALVPDLVVNAEESARAPHLLSVSIDGADSEALVMHLDLAGIAASSGSACSTGAVEPS
                     HVLVAMGVPRERALGAIRFSFGRESTQPDVERAAAVVPAVVAKVRKLASVLGRTGERA
                     GVGP"
BASE COUNT          465 a          925 c          862 g          380 t
ORIGIN      
        1 actggcgact gacgactggc gactctttcg gcatcaacgc cagcgacaag accatgctga
       61 ccagcccgac caccagcccg ccgaagaacg ccgcccagaa gccgctcacc ataaacccca
      121 ggttccagct ctccgaaagc cagccggtca ccaggagcat cagcgcgttg atcaccaggg
      181 tgaagagccc gagcgtgagc acgatcagcg ggcaggtgag gacggtgagc agagggcgca
      241 gcgtgctgtt gacgatcccg aacaccgcag cgacgaggag caggcggccg ggaccgccgt
      301 tgaagtcgag acccggaatc agggccgcgg ccacccagag cgccgcggcg ttgagaatcc
      361 agtgaaggag cagcgagcgc acgcgctcag ccgatcacgc cgccgccaag caccctgcct
      421 ccggatccat agagcactcc ggactgacca ggggcgatgg cgcggaccgg cgtttccaga
      481 gcgaggtcga gcctgtcctc gctgctctcc aacaccgttg ccggtgcgct ccgggcccgg
      541 tacctgatct gcacttcaca acggtcgccg ggccgcagag gatccgccag ccagttgacc
      601 tcatcgagat gcacactgtg cccggcgagg tcctccgccc tccccaccac cacttcccgg
      661 cgatcgggcc ggatcgccac cacgtaacga gctccgttgg aaccgccggg caagcccttc
      721 cgctggccga tggtgtagcg gccatacccg tggtgctcgc cgaccacctc gcccgacgta
      781 gtgatcagcg gccccgggag gagggcggga gcatcagccg gaagatggcg ctccagcacc
      841 gagacgtagt cgtcgttggg gacgaaacag atctcgaccg attcctcttt gtcggcggtg
      901 gtgagcccca gacggcgggc gtacgtccgc gtctccgcct tggacatctc gccgaccggg
      961 gtgagcatcc gagccaccac gttccggtca attccccaca ggaagtagct ctgatccttg
     1021 ttgaggtcgc gcccgcggta cagcccgccc gcccgggcaa cagcatagtg gcccgtggcg
     1081 atgtagtcgc actcgagcgc atccgcatgg gccaggaggt cgcgaaactt ggtgaacgaa
     1141 ttgcaccgga cacaggggat cggggtgcgg ccgcggctgt actcgctgac gaagttctgg
     1201 atcacgtgca ggttgaaccg gtcctcgaga ttcagcacgt aatgcgggat gccgagcgcg
     1261 tgcgcgacat cgcgcgcatc gttaatggag tcgagtgagc agcatggccg gtcgggcacg
     1321 tcgtcgccat agcagaacag cttcatggta gcgccgatga catcatagcc ctgctcgacc
     1381 aggcgggctg ctgccacgga gctgtccact ccaccggaca tcgctaccag cacgcgcctg
     1441 ctcatggtcc gacgcccgcc cgttcgcccg tccgcccgag cacgctcgcg agcttccgca
     1501 ccttggcgac gaccgccggc acgaccgccg cggctcgctc cacgtcgggc tgggtgctct
     1561 cacgcccgaa gctgaagcga atggccccaa gcgcccgctc acgaggcacg cccatggcca
     1621 cgaggacatg cgagggctcc actgcaccgg tggagcaggc cgacccactc gacgcggcga
     1681 tgccggcgag atccagatgc atcacgaggg cttcgctgtc ggctccatcg atcgagacgc
     1741 tgagcagatg tggagcgcgg gcgctttcct cggcgttgac gaccagatcg ggcaccagcg
     1801 ccttgagcct ggcggcgagg tcgtcgcgga gcatccgcag ccgctccgcc aggtgcacct
     1861 gctcggccgc ggccagctgg gcggcgcgac ccagggccac ggcaccggcg acgttttccg
     1921 tgcccggccg gatcccgaac tgctggccac cgccgtgaat gatggcctcg accgccttcc
     1981 ggtcgcgcac gatcagggcg ccgattccct tgggtgcacc gatcttgtgt cccgagatgg
     2041 tgagcagggt gcaggagagc tcactgaccg agaccggcac cttgccgacc gcctgcaccg
     2101 catcggtgtg gaaggtgatc cctgcctcct ggcaacggcc ggcaatttcc tgcaccggct
     2161 gaatcatacc gacctcgttg ttgacccaca tgaccgagac gacggcggga cagtcgacca
     2221 gcactcgatc gagcgcgtcg aggtcgagcc tacctccgcc gtccaccggc agcagtacct
     2281 cacggccgcc gagatgacac acggcgtgcg ccgcagccag cacggccttg tgctcgatcg
     2341 ccgacactgc aacgcacatc tggccaccac ggtcgcgcgc ggccagcgca gcgcccacga
     2401 tgccgaggtt atcggcctcg gtgccacccg aggtgaaaac cacctgattg ggctccgcgc
     2461 cgagcgcctc cgcgatctgc cggcgggcct gctcgatgcc ggcgcgggcc gcccggccga
     2521 agcgatgggc gctggacggg ttgccgaacg attgcgccgt gaggtacggc agcatcgcct
     2581 ccagcacctc gggtcggacc ggggtggtgg cggcgtagtc gaggtagaca gg
//
LOCUS       DASYRV010000655         8414 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U4520
            k141_1242492, whole genome shotgun sequence.
ACCESSION   DASYRV010000655 DASYRV010000000
VERSION     DASYRV010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958606
            Sequence Read Archive: SRR11742948
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/13/2024 15:58:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,456
            CDSs (total)                      :: 3,416
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 5 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 2 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8414
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1242492"
                     /isolate="SMAG_U4520"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1677 N 96.4108 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..868
                     /locus_tag="VGQ24_17235"
     CDS             <1..868
                     /locus_tag="VGQ24_17235"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEV8456641.1"
                     /translation="EQHGWILVFHALTGSADVEAWWGPLIGPGRALDTSRHAIVAANL
                     LGSCYGSTGPAEWGAECGGRFPELTPVDLARAHIPLLEHLGVQKLALATGGSLGGMVA
                     LQWGRVSNIPTERLVVFAAPAAASPQAIGWNAVQRMAIEADPKAGLAAARALAMITYR
                     SAAEFQARFGRGSSRSPGLFDVDYYLRRQGDKLVARFDAASYVALMRSMDLQDVGDLA
                     TAARETARQVDRVIGVGIDSDILYPASEVRDWVGAYQAAGARAEYREIASLYGHDAFL
                     IEWDQVERILRG"
     gene            1103..1321
                     /locus_tag="VGQ24_17240"
                     /pseudo
     CDS             1103..1321
                     /locus_tag="VGQ24_17240"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1406..2275)
                     /locus_tag="VGQ24_17245"
     CDS             complement(1406..2275)
                     /locus_tag="VGQ24_17245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEV8456642.1"
                     /translation="MRPMQVGSGKRGPSFDEGSLDQYLREISKYPLIPQEEEVNLAQR
                     IRVGEEEALDKLVRSNLRFVVSVAKKYQNQGVSLADLINEGNLGLIRAAHKFDETKGI
                     KFISYAVWWIRQAILQALAEQSRIVRVPLNRAGTLHRIGKRSSALLQELGREPTPSEI
                     AEGMDISMEEVQKTLSISQNHLSLDAPLTPGEDNKLLDYLPDTQNPGPDSETFEHALT
                     ESIEEVLSTLKEREAKILRLYFGLDGPEPMTLEEIGSLLGITRERVRQIKEKALSRLR
                     HVSRARALESFLA"
     gene            complement(2443..3984)
                     /locus_tag="VGQ24_17250"
     CDS             complement(2443..3984)
                     /locus_tag="VGQ24_17250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEV8456643.1"
                     /translation="MTKTSNMREPRVGKAAGVETFKNFIGGEWRTPAADAYFDNRNPA
                     KPDDLIGRFPDSDRRDIDAAVRSAKRGFAIWSRTPAPVRGDVLRRVGDLLVERKEAIA
                     DAMTREMGKVLAETRGDVQEGIDTAYYAATEGRRLFGHVVPSELRSKWAMSYRRPIGV
                     VGLITPFNFPMAIPTWKMFPALLCGNSVIIKPSEDVPHTVHLLVEILLEAGLPPEVIQ
                     LVHGRGETAGKALVEHPEVPVISFTGSTETGAIIGETCGRMHKRLSLEMGGKNAMIVM
                     DDANQDLALEGVLWGAFGTTGQRCTATSRLILHDKVHDKLLQRLSDAAAALKLGDGRQ
                     EKTQVGPLIHQAAREKVEHYVDIGRKEGAELVTGGETPSGGQLGEGWFYRPTVFAGVK
                     PGSRLEQEEIFGPVLSVIRVGSFDQAVRVNNDVRYGLSSSIYTGNVDLAFRAIEELDN
                     GITYVNAPTIGAEAHLPFGGVKATGNGHREGGWEVYDFYSETKVCYVDYSGKLQRAQI
                     DTYDV"
     gene            complement(3981..4457)
                     /locus_tag="VGQ24_17255"
     CDS             complement(3981..4457)
                     /locus_tag="VGQ24_17255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456644.1"
                     /translation="MTEQPRDWDRELANIDRAISKQQPAATGPVQTGAPPPTPQRRFV
                     ALTWFWTGLALLLAVALLLWPYDRNCGLRLVFFIGAGGLALLAGVVGALTSWAHHRGL
                     AHLLSLLVIGWAAVLVTREILPRVGYAKEARDWTCPPPPPVPNPAPPAQPSAQPGT"
     gene            complement(4454..5818)
                     /locus_tag="VGQ24_17260"
     CDS             complement(4454..5818)
                     /locus_tag="VGQ24_17260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEV8456645.1"
                     /translation="MSHRILIVDDESGIRQALKQVLEYEDLVVRVAASGGEAITMYSE
                     YRPHLVFLDVKMAGLDGLETLTRLRDLDPKAQVVMISGHGTIATAVEATQRGAFDFLE
                     KPLDTDRLLVTVRNALVHAELVDENTRLKEATESRFAMVGSSPALQTVRDLIAKVGPT
                     SARVLITGENGTGKELVARALHEASPRRDRPFVEVNCAAIPSELIESELFGHMKGSFT
                     GAFADRTGKFEQADGGTLFLDEVGDMSLSAQSKLLRVLQEGVVGRIGGSKPIKVDVRV
                     LAATNKDLDAEIAEGRFREDLLYRLNVVPIDVPPLRERAEDIPALVAFFAEQLASSAG
                     VPGRKFADDAVRRLQSRSWPGNIRELRNAVERALILASGKTVTAADIDHLLPGPVAVG
                     GPAGASGSHTFETFKLEAEKNFLTQKLKEHDWNVSETARSLKMPRSNLYKKIERYGLS
                     RESV"
     gene            complement(5815..6462)
                     /locus_tag="VGQ24_17265"
     CDS             complement(5815..6462)
                     /locus_tag="VGQ24_17265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEV8456646.1"
                     /translation="MGCLSAPLKLLGGLGLIVLLIVGWLYRDRLADELRSLLGSRLPS
                     GETVTSGRPGNRALLSARSKIDSLNGWRADSVILSASEVASMIGVGLDPSVRSQLDSL
                     EVQLLDGSIGVSALLATARLPRELIGPLAVALRPKERIEAAGPLQVVQPRQAEWAVRS
                     FRIRDFPIPRDAVPKLVARALGDSSRRTVPIRIPAGIREIRIRPSGATLVGAPRP"
     gene            complement(6462..7016)
                     /gene="thpR"
                     /locus_tag="VGQ24_17270"
     CDS             complement(6462..7016)
                     /gene="thpR"
                     /locus_tag="VGQ24_17270"
                     /inference="COORDINATES: protein motif:HMM:TIGR02258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008664 - 2'-5'-RNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HEV8456647.1"
                     /translation="MRLFIAVPIPNPAREQILTLLGRLREGGWPVRWVHDEGLHMSLK
                     FFGEVASERLDVIQEALRFAAAGAGALSLRLGELGAFPSRARPRILWVGVEAPPSLEL
                     LQDRIERGCEAIGFPPEGTPFQPHVTLGRVREGQRLPPGGLEDHADGFEQVPFVASEL
                     VLYESLLTTGGPRYESRLTLDLGH"
     gene            complement(7016..7825)
                     /gene="larE"
                     /locus_tag="VGQ24_17275"
     CDS             complement(7016..7825)
                     /gene="larE"
                     /locus_tag="VGQ24_17275"
                     /inference="COORDINATES: protein motif:HMM:TIGR00268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent sacrificial sulfur transferase
                     LarE"
                     /protein_id="HEV8456648.1"
                     /translation="MADLETLRAHLLGLGRVVLGYSGGVDSALLAVVGARALGAGRFL
                     AVTGRSPSYPEVQYRNAVELARRFEVPLLEVDTHELEDPRYLSNSTDRCYFCKSELWL
                     RLVAVVGERGFDAVIDGTNADDLGEHRPGLRAAAEHHIRSPLAELGWTKADVRQAARE
                     LELPTWDAPSAPCLSSRVLYGLEITSERLRQVEEGESFLRSLGVTGDLRVRHHGRKAR
                     LEVTPDQMDRLRAQWSSIDAEFSSLGFDVVELDPAGYRRGALLTIAPHSTG"
     gene            8115..>8414
                     /locus_tag="VGQ24_17280"
     CDS             8115..>8414
                     /locus_tag="VGQ24_17280"
                     /inference="COORDINATES: protein motif:HMM:NF012684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor-like protein"
                     /protein_id="HEV8456649.1"
                     /translation="MPDDNVLEITQDLRLPLTELEYQASRSGGPGGQHVNTSSTRIEV
                     WWDVAGSPTLTPEQRAQLLERLRSKLDSAGRLRLVSSGSRSQLRNREDVTERLRSV"
BASE COUNT         1492 a         2730 c         2720 g         1472 t
ORIGIN      
        1 cgagcagcac gggtggattc tcgtcttcca tgcgctgacc ggcagtgcgg atgtcgaggc
       61 ctggtggggt ccactgatcg ggccgggccg ggccctcgac acctcgcgcc acgccatagt
      121 agccgccaac ctcctcggca gttgttatgg atccaccggc cctgccgagt ggggggcgga
      181 gtgtggtggg cgctttcccg agctcacccc ggtggacctg gcacgggccc atatcccgct
      241 gctggaacat ctcggtgtcc agaagctggc attggccacc ggcggatcgc ttggcggcat
      301 ggttgccctc caatgggggc gcgtcagcaa cattcccacc gaacggctgg tcgtcttcgc
      361 ggcgccggca gcggcctctc cccaagccat cgggtggaac gcggtacagc ggatggcgat
      421 cgaggctgac ccgaaggccg gcttggcggc agcccgggcc ctggccatga tcacgtaccg
      481 ctcggccgcc gaatttcaag cgaggttcgg acggggctcg tcccgctcgc ccgggctctt
      541 cgacgtggac tactaccttc gaagacaggg agacaagctg gtggcacgat tcgatgcggc
      601 gagttatgtg gccctgatgc ggtcaatgga cctccaggac gtcggcgacc ttgccactgc
      661 ggctcgggaa acggctcggc aggttgatcg ggtgatcggc gtcgggatcg actcggatat
      721 cctgtatccg gccagcgagg tacgcgactg ggttggggcc taccaggcgg cgggcgcgcg
      781 cgcggagtac cgcgagatcg cgtcactcta cgggcacgat gcgtttttaa ttgaatggga
      841 tcaggtcgag aggatattga ggggttagag ttgtcattct gagcgaagcg aagaatccct
      901 actcggcaag cggagagatc cttcgctgcg ctcaggatga tacgtcctgc gctgcattgg
      961 ttgcatgttc cgagaaattc gtcgcattgt ctccgaatgc ctccccgcac cttccacgtc
     1021 tacatcgtgg ccagtgcttc ccggcgattg tatgtcggcg taactgggca cctcgcgcgc
     1081 cggatagacc cagcaccgca ggctccagat caaagggttc actcgagagt accagatggt
     1141 ccggctggtc tatgtcgaag cgacttcgga cgtgaaaagc gcgatcaggc gggagaagca
     1201 gatcaagggc tgggtaagaa gcaagaagat cggcttaatc gaggccttga atccggagtg
     1261 gcttgatctt gcagaggagc ttctaggtga tcggagagat ccttcgcttc gctcaggatg
     1321 acacgtttga gcatgatcct tcgcgaaccc tgccctgagc gccagcgaag agctcagaat
     1381 gacaagggaa agccatcgac atagctcagg ctaggaaact ctccagcgct cgtgcccggc
     1441 tcacatgacg tagccggctc agcgcctttt ccttgatctg gcgcacccgc tcccgggtga
     1501 ttccgagcag gctgccgatc tcttccagcg tcatcggctc ggggccgtcc aggccgaaat
     1561 agagccgcag gatcttggcc tcgcgctcct tcagcgtgga cagcacttcc tcgatcgatt
     1621 cggtgagcgc gtgctcgaag gtctcggagt cgggaccggg attctgcgtg tccggcagat
     1681 aatcgaggag cttgttgtct tcgccggggg tgagcggcgc gtcgagcgag agatgattct
     1741 gggagatgga cagagtcttc tggacctctt ccatcgatat gtccatgcct tccgcaatct
     1801 cggacggggt cggctcccgc cccagctcct gcagcaatgc agacgagcgc ttgccgatgc
     1861 ggtgcagcgt gccggcgcgg ttgaggggca cccggacaat ccggctctgc tcggccagcg
     1921 cctgaaggat ggcctggcga atccaccaga ccgcgtagga aatgaacttg atgcccttgg
     1981 tctcgtcgaa cttgtgggcg gcgcggatca ggccgaggtt gccctcgttg atgaggtcgg
     2041 cgagggagac gccctggttc tgatacttct tggccaccga gaccacgaag cgcaggttgc
     2101 tgcggaccag cttgtcgagc gcctcctctt ccccgacgcg aatccgctgc gccaggttga
     2161 cctcttcctc ctgtggtatc agcgggtact tgctgatctc acgtaagtac tggtcgaggg
     2221 agccttcgtc gaaggaggga ccgcgcttac ccgaaccgac ctgcattgga cgcatggtgg
     2281 aaccttaccc cacgatcaga aggtgcgcaa tggaggtagt cgttagtcgc tagactctag
     2341 tcacgagatt tttgagacgg tgactcccat cacccatggg agttgacacc ggacactttt
     2401 ggtctgctgc ctgaccagag actagcgact aacgactaac gactagacgt catacgtatc
     2461 aatctgcgcc cgctgaagct tcccggagta gtcgacgtag cagaccttgg tctcggagta
     2521 aaagtcgtag acctcccagc caccctcacg gtggccgttg ccggtcgcct tgacgccgcc
     2581 gaagggaaga tgcgcctccg caccgatggt gggggcgttg acataggtga tcccgttgtc
     2641 gagctcctcg atggcccgga acgcgagatc cacgttcccg gtgtagatcg agctggagag
     2701 cccgtaccgg acatcgttgt tgacccggac agcctggtcg aatgatccca cccggatcac
     2761 gctcaacacc ggaccgaaga tctcctcctg ctccagccgg ctcccaggct tgactcccgc
     2821 gaacacggtg ggccggtaga accagccttc ccccagctgc ccgcccgatg gtgtctctcc
     2881 accggtgacg agctcggccc cttccttccg gcctatgtcg acgtagtgct cgaccttctc
     2941 ccgtgcggcc tggtggatca acgggcccac ctgggtcttc tcctggcggc cgtcaccgag
     3001 tttcagcgcc gcggcggcat cggacagccg ttgcaggagc ttatcgtgca ccttgtcatg
     3061 gaggatgaga cggctggtgg cagtgcagcg ctgtcccgtg gtgccgaacg ctccccacaa
     3121 cacgccctcc aacgcgagat cctgattggc atcgtccatg acgatcatgg cgttcttgcc
     3181 gcccatctcg agggacagcc gcttgtgcat ccggccgcag gtctcgccga tgatcgcccc
     3241 ggtctcggtg gacccggtga acgagatgac cggcacctcg ggatgctcga ccaacgcctt
     3301 ccccgccgtc tcgccgcggc cgtgcaccag ctggatgacc tcgggcggaa gacccgcctc
     3361 gagcaggatc tcgaccagca gatgcacggt gtgcggcaca tcctcggagg gcttgatgat
     3421 caccgaattc ccgcacagca acgcgggaaa catcttccac gtcgggatgg ccatgggaaa
     3481 gttgaacggc gtgatcaacc cgacgacgcc aatgggacgg cgatagctca tcgcccattt
     3541 cgagcgaagc tccgatggca cgacgtggcc gaacaggcgt cgtccctcgg tcgccgcata
     3601 gtaggcggtg tcgattccct cctgcacgtc gccccgcgtc tcggcgagca ccttccccat
     3661 ttcgcgggtc atcgcgtccg cgatggcctc cttgcgttcg accaacaggt cgccgacccg
     3721 ccgcaataca tcccctcgga ccggcgcggg ggtccgcgac cagatcgcga agccgcgctt
     3781 cgccgagcgc accgccgcat ctatgtcgcg gcgatccgaa tcggggaacc gcccgatcag
     3841 atcgtccggc tttgccgggt tccggttatc gaaataggcg tcggcggccg gcgtgcgcca
     3901 ctcgccgccg atgaaattct tgaaggtctc gaccccggcc gctttgccta cccgcggctc
     3961 acgcatgttg gatgtcttgg tcatgttccc ggttgggctg aaggctgtgc tggaggtgct
     4021 ggatttggga ccggcggcgg tggggggcaa gtccagtcgc gggcctcttt ggcgtagccg
     4081 acccggggga ggatctcgcg cgtcaccagg accgctgccc acccgatgac gaggagggac
     4141 agcaggtgcg ccagcccccg gtgatgagcc cagctggtca gtgccccgac gacgcccgca
     4201 agaagcgcca ggccgccggc gccgatgaag aagaccagcc ggaggccgca attcctatcg
     4261 tagggccaca gcagaagcgc gacggcaagc aggagcgcga gcccggtcca gaaccaggtc
     4321 agggcgacaa accgccgttg cggtgttggg ggcggtgcgc cggtctgcac cggtccggta
     4381 gcagccggct gctgctttga gatggctcga tcgatgttgg ccagctcccg atcccaatct
     4441 cttggctgct ccgtcatacc gactcccggc tgaggccgta gcgctcgatt ttcttgtaca
     4501 ggttggagcg cggcatcttc agcgaccgcg ctgtctcgga gacgttccag tcgtgctcct
     4561 tcagcttctg ggtaagaaaa ttcttctccg cttccagctt gaacgtctcg aaggtgtgac
     4621 tgcctgacgc cccggcgggg cccccgaccg ccactggacc cggcaggagg tggtcgatat
     4681 ccgccgcggt gaccgttttg cccgaggcga ggatcagcgc ccgctcaacg gcgttgcgca
     4741 gctcccgaat gttgcccggc caagagcgcg actgtagccg gcggaccgcg tcatcagcga
     4801 acttcctgcc gggaaccccg gcgctcgacg ccaactgctc ggcgaaaaag gcgaccagcg
     4861 ccggaatgtc ctcggcgcgt tcccgcagcg gcgggacatc gatcggcacc acgttgagac
     4921 ggtagaggag gtcctcccga aaccggccct cggcgatctc cgcatcgaga tccttattgg
     4981 tcgcggcaag cacccggaca tcgaccttga tcggcttgga gcccccgatc cgcccgacta
     5041 cgccctcctg gagcacgcgc agcagcttgg actgggctga gagggacatg tcgcctactt
     5101 cgtccaggaa cagggtcccc ccgtctgcct gctcgaactt ccctgtccgg tcggcgaagg
     5161 cgccggtgaa cgaccccttc atgtgaccga agagctcgct ttcgatcagc tccgagggaa
     5221 tggccgcgca gttgacctcg acgaaggggc ggtcacggcg gggtgatgct tcatgcagag
     5281 cgcgggcgac cagctccttc ccggtcccgt tctcacccgt gatcaggacc cgggccgagg
     5341 tgggacctac cttggcaatg agatcgcgca ctgtctggag ggccgggctg ctgcccacca
     5401 tggcgaatcg gctctccgtc gcctctttga gcctcgtgtt ctcgtccacc agctcggcat
     5461 ggacgagggc attccgcacc gtgaccagga gccggtcggt gtcgagtggc ttctccagaa
     5521 aatcgaaggc gccccgctga gtcgcttcca ctgccgtggc gatggtcccg tgtccggaga
     5581 tcattaccac ctgcgcctta ggatccagat ctctgagccg agtcagcgtc tcgagaccgt
     5641 caagacccgc catcttcacg tcgagaaaga ccagatgggg tcggtactcg gaatacatcg
     5701 taatcgcctc gccacccgag gcagctaccc gcaccacgag atcttcgtac tcgaggacct
     5761 gcttcagggc ctgacggatc cctgactcat cgtccacgat caggatccgg tggctcacgg
     5821 gcggggagct ccgacgaggg tggcgccgga cggccgaatc cggatctccc ggatgcccgc
     5881 cggaatccgg atcgggacgg tacgccggct cgaatccccc aaggccctgg ccacgagctt
     5941 gggcaccgca tctcggggaa tcggaaagtc ccggatacga aaggagcgga ctgcccattc
     6001 ggcctgtcgc ggttggacca cctggagcgg accggccgcc tcgatccgct ccttgggccg
     6061 gagggccacg gccaacggac cgatcaactc ccgaggcaga cgggcggtcg cgagcagcgc
     6121 actcaccccg atcgagccgt cgagcagctg tacctcgagt gagtccagct ggctccggac
     6181 cgatggatcg aggcccaccc cgatcatcga tgccacctcg gacgcactga ggatcaccga
     6241 gtcggctctc cagccgttga gggagtcgat cttcgagcgg gccgacagga gcgcacggtt
     6301 gcctggcctg cccgaggtca cggtctcacc cgaggggagt cgggagccga gcaggctgcg
     6361 cagctcgtca gccagacggt cgcgatacag ccagcccacg atcaagagga caatcaggcc
     6421 cagaccaccg agcagcttca agggagcgga caggcagccc atcagtgtcc gagatcgagg
     6481 gtgaggcgag actcgtagcg cggtcccccg gtggtcagga gactctcata gagcaccagt
     6541 tcgctcgcca cgaacggcac ctgctcgaaa ccgtccgcgt ggtcctccag gccaccggga
     6601 gggagccgct gcccctcccg aacgcgaccc agagtcacat gcggctggaa tggcgtgcct
     6661 tctggtggaa agccgattgc ttcgcaaccc cgctcgattc gatcctggag cagctccagc
     6721 gagggcgggg cctccacgcc aacccagagg atgcggggcc gggcacggct gggaaaggcg
     6781 ccgagctcac ccaaccggag cgaaagggct ccggcaccgg ccgccgcgaa gcgcagcgcc
     6841 tcctggatga cgtccagccg ctccgaggcg acctcgccga aaaatttcag gctcatgtgc
     6901 agaccttcat catgcaccca tcgcaccggc cagccgcctt cacgcaggcg gccaagcagg
     6961 gtgaggatct gctcccgggc cggattgggg atcgggaccg cgataaagag ccgcatcaac
     7021 cggtggagtg cggcgcgatc gtgaggagcg cgccccggcg atacccggcc ggatccagct
     7081 ccaccacgtc gaacccgaga ctgctgaact cggcgtcgat cgagctccac tgggcccgga
     7141 gccggtccat ctgatcggga gtgacttcga gcctggcctt cctcccgtgg tggcggacgc
     7201 ggaggtcgcc ggtcactccg agcgagcgca gaaaggactc tccttcttcc acttggcgca
     7261 atcgctctga agttatttct agaccataga gcacccggct cgagaggcac ggagcggacg
     7321 gagcatccca cgtcggcagc tccagctcgc gggcggcctg tcgaacgtcg gccttggtcc
     7381 agccgagctc ggccaaagga gaccggatgt gatgctccgc cgcggctctg aggccaggcc
     7441 ggtgctcgcc gaggtcgtcg gcgttggtgc cgtcgatgac cgcgtcgaag cctcgctccc
     7501 cgaccaccgc gaccagccgg agccacagct cggacttgca gaagtaacac cgatctgtgg
     7561 agttgctcag gtatcggggg tcttccagct cgtgggtgtc gacctcgagg agcggcacct
     7621 cgaaccgccg cgccagctcg actgcgttcc gatactgaac ttccggatat gatggactcc
     7681 gtccggtgac ggcgaggaat cggcccgctc cgagcgcgcg tgccccaacc accgcgagga
     7741 gggccgagtc cacgccgccg gagtagccga ggacgacacg ccctagtccg agcaagtgtg
     7801 cacgcagagt ttcgaggtca gccatgagca gaaacgtaac tgcgaaacgg tgagggcggt
     7861 aaggcggtag ggcggtaggg cggtaaggcg gtaaggcggt aaggcggtag atacgacgac
     7921 ggtagtcatc gcgagcggcg tagccgcgtg gcgatcccgc ggctcccgct tggaagcggc
     7981 gggattgctt cggcgcttaa gcgcctcgca atgacttgta ccgccgtacc gccgtaccgc
     8041 gcttgtcacc ctgagccctt cgctgcgctc cgggtaaact tcgcgagggg accggaactc
     8101 gaatacaatt acgcatgccc gacgataacg ttctggaaat cacccaggac ctccgccttc
     8161 cgctcaccga gctggagtac caggcctcgc gctccggcgg gcccggcggt cagcacgtca
     8221 acacgtcctc cacccgcatc gaggtctggt gggatgttgc tgggtcgccc accctcacgc
     8281 ccgagcagcg ggctcaattg ttggagcgtc tgaggagcaa gctcgactcg gccggtcgct
     8341 tgcgactggt gtcgagcgga tcgcgcagcc agcttcgtaa ccgggaggat gtgacggagc
     8401 ggctgcggtc agtg
//
